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A GUI for running popular spike sorting algorithms on extracellular data of any file format.
Python
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docs Minor installation update Oct 14, 2019
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README.md
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setup.py Bug fix Oct 12, 2019

README.md

spikely

An application built on top of SpikeInterface to create and run extracellular data processing pipelines within a GUI. Spikely currently supports loading, preprocessing, sorting, and curating extracellular datasets that are stored in SpikeInterface compatible file formats.

Setup

To run spikely first you must install it:

pip install spikely

Once installed, spikely can be launched from the command line:

spikely

Documentation

All documentation for spikely can be found here: https://spikely.readthedocs.io/en/latest/.

Screenshot

gui

Authors

Roger Hurwitz - Portland, Oregon, USA

Cole Hurwitz - The Institute for Adaptive and Neural Computation (ANC), University of Edinburgh, Edinburgh, Scotland

Shawn Guo - The Institute for Adaptive and Neural Computation (ANC), University of Edinburgh, Edinburgh, Scotland

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