Skip to content
Permalink
Browse files

Initial import

  • Loading branch information...
StefanDywersant committed Jan 20, 2018
0 parents commit 3335df4c57238d3221d70531220af308836902ff
Showing with 1,171 additions and 0 deletions.
  1. +3 −0 .gitignore
  2. +29 −0 build.gradle
  3. BIN gradle/wrapper/gradle-wrapper.jar
  4. +5 −0 gradle/wrapper/gradle-wrapper.properties
  5. +172 −0 gradlew
  6. +84 −0 gradlew.bat
  7. +18 −0 settings.gradle
  8. +40 −0 src/main/java/pl/czystybeton/genetic/Genotype.java
  9. +26 −0 src/main/java/pl/czystybeton/genetic/Individual.java
  10. +36 −0 src/main/java/pl/czystybeton/genetic/Population.java
  11. +19 −0 src/main/java/pl/czystybeton/genetic/crossover/AddCrossover.java
  12. +33 −0 src/main/java/pl/czystybeton/genetic/crossover/ComplexCrossover.java
  13. +33 −0 src/main/java/pl/czystybeton/genetic/crossover/HalfsCrossover.java
  14. +11 −0 src/main/java/pl/czystybeton/genetic/crossover/ICrossover.java
  15. +22 −0 src/main/java/pl/czystybeton/genetic/crossover/MergeCrossover.java
  16. +26 −0 src/main/java/pl/czystybeton/genetic/crossover/WeightedCrossover.java
  17. +25 −0 src/main/java/pl/czystybeton/genetic/fitness/ComplexEvaluator.java
  18. +15 −0 src/main/java/pl/czystybeton/genetic/fitness/GenotypeLengthEvaluator.java
  19. +10 −0 src/main/java/pl/czystybeton/genetic/fitness/IFitnessEvaluator.java
  20. +46 −0 src/main/java/pl/czystybeton/genetic/fitness/SharpenerEvaluator.java
  21. +9 −0 src/main/java/pl/czystybeton/genetic/gene/IGene.java
  22. +9 −0 src/main/java/pl/czystybeton/genetic/gene/IOffsetGene.java
  23. +52 −0 src/main/java/pl/czystybeton/genetic/mutation/ChangeOffsetMutator.java
  24. +18 −0 src/main/java/pl/czystybeton/genetic/mutation/DeletionMutator.java
  25. +9 −0 src/main/java/pl/czystybeton/genetic/mutation/IDegreeMutator.java
  26. +9 −0 src/main/java/pl/czystybeton/genetic/mutation/IMutator.java
  27. +46 −0 src/main/java/pl/czystybeton/genetic/mutation/weightedcomplex/WeightedComplexMutator.java
  28. +24 −0 src/main/java/pl/czystybeton/genetic/mutation/weightedcomplex/WeightedMutatorItem.java
  29. +54 −0 src/main/java/pl/czystybeton/genetic/population/InitialPopulationGenerator.java
  30. +39 −0 src/main/java/pl/czystybeton/genetic/recipe/CrossPopulationIngredient.java
  31. +15 −0 src/main/java/pl/czystybeton/genetic/recipe/IIngredient.java
  32. +35 −0 src/main/java/pl/czystybeton/genetic/recipe/PopulationRecipe.java
  33. +23 −0 src/main/java/pl/czystybeton/genetic/recipe/PreserveBestIngredient.java
  34. +57 −0 src/main/java/pl/czystybeton/genetic/recipe/SinglePopulationIngredient.java
  35. +12 −0 src/main/java/pl/czystybeton/genetic/selection/ISelection.java
  36. +41 −0 src/main/java/pl/czystybeton/genetic/selection/RouletteWheelSelection.java
  37. +37 −0 src/main/java/pl/czystybeton/genetic/util/MathTool.java
  38. +29 −0 src/main/java/pl/czystybeton/genetic/util/RouletteWheel.java
@@ -0,0 +1,3 @@
.idea
.gradle
*.iml
@@ -0,0 +1,29 @@
/*
* This build file was generated by the Gradle 'init' task.
*
* This generated file contains a sample Java Library project to get you started.
* For more details take a look at the Java Libraries chapter in the Gradle
* user guide available at https://docs.gradle.org/4.4.1/userguide/java_library_plugin.html
*/

// Apply the java-library plugin to add support for Java Library
apply plugin: 'java-library'

// In this section you declare where to find the dependencies of your project
repositories {
// Use jcenter for resolving your dependencies.
// You can declare any Maven/Ivy/file repository here.
jcenter()
}

dependencies {
// This dependency is exported to consumers, that is to say found on their compile classpath.
api 'org.apache.commons:commons-math3:3.6.1'

// This dependency is used internally, and not exposed to consumers on their own compile classpath.
implementation 'com.google.guava:guava:23.0'

// Use JUnit test framework
testImplementation 'junit:junit:4.12'
}

Binary file not shown.
@@ -0,0 +1,5 @@
distributionBase=GRADLE_USER_HOME
distributionPath=wrapper/dists
zipStoreBase=GRADLE_USER_HOME
zipStorePath=wrapper/dists
distributionUrl=https\://services.gradle.org/distributions/gradle-4.4.1-bin.zip
172 gradlew
@@ -0,0 +1,172 @@
#!/usr/bin/env sh

##############################################################################
##
## Gradle start up script for UN*X
##
##############################################################################

# Attempt to set APP_HOME
# Resolve links: $0 may be a link
PRG="$0"
# Need this for relative symlinks.
while [ -h "$PRG" ] ; do
ls=`ls -ld "$PRG"`
link=`expr "$ls" : '.*-> \(.*\)$'`
if expr "$link" : '/.*' > /dev/null; then
PRG="$link"
else
PRG=`dirname "$PRG"`"/$link"
fi
done
SAVED="`pwd`"
cd "`dirname \"$PRG\"`/" >/dev/null
APP_HOME="`pwd -P`"
cd "$SAVED" >/dev/null

APP_NAME="Gradle"
APP_BASE_NAME=`basename "$0"`

# Add default JVM options here. You can also use JAVA_OPTS and GRADLE_OPTS to pass JVM options to this script.
DEFAULT_JVM_OPTS=""

# Use the maximum available, or set MAX_FD != -1 to use that value.
MAX_FD="maximum"

warn () {
echo "$*"
}

die () {
echo
echo "$*"
echo
exit 1
}

# OS specific support (must be 'true' or 'false').
cygwin=false
msys=false
darwin=false
nonstop=false
case "`uname`" in
CYGWIN* )
cygwin=true
;;
Darwin* )
darwin=true
;;
MINGW* )
msys=true
;;
NONSTOP* )
nonstop=true
;;
esac

CLASSPATH=$APP_HOME/gradle/wrapper/gradle-wrapper.jar

# Determine the Java command to use to start the JVM.
if [ -n "$JAVA_HOME" ] ; then
if [ -x "$JAVA_HOME/jre/sh/java" ] ; then
# IBM's JDK on AIX uses strange locations for the executables
JAVACMD="$JAVA_HOME/jre/sh/java"
else
JAVACMD="$JAVA_HOME/bin/java"
fi
if [ ! -x "$JAVACMD" ] ; then
die "ERROR: JAVA_HOME is set to an invalid directory: $JAVA_HOME
Please set the JAVA_HOME variable in your environment to match the
location of your Java installation."
fi
else
JAVACMD="java"
which java >/dev/null 2>&1 || die "ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH.
Please set the JAVA_HOME variable in your environment to match the
location of your Java installation."
fi

# Increase the maximum file descriptors if we can.
if [ "$cygwin" = "false" -a "$darwin" = "false" -a "$nonstop" = "false" ] ; then
MAX_FD_LIMIT=`ulimit -H -n`
if [ $? -eq 0 ] ; then
if [ "$MAX_FD" = "maximum" -o "$MAX_FD" = "max" ] ; then
MAX_FD="$MAX_FD_LIMIT"
fi
ulimit -n $MAX_FD
if [ $? -ne 0 ] ; then
warn "Could not set maximum file descriptor limit: $MAX_FD"
fi
else
warn "Could not query maximum file descriptor limit: $MAX_FD_LIMIT"
fi
fi

# For Darwin, add options to specify how the application appears in the dock
if $darwin; then
GRADLE_OPTS="$GRADLE_OPTS \"-Xdock:name=$APP_NAME\" \"-Xdock:icon=$APP_HOME/media/gradle.icns\""
fi

# For Cygwin, switch paths to Windows format before running java
if $cygwin ; then
APP_HOME=`cygpath --path --mixed "$APP_HOME"`
CLASSPATH=`cygpath --path --mixed "$CLASSPATH"`
JAVACMD=`cygpath --unix "$JAVACMD"`

# We build the pattern for arguments to be converted via cygpath
ROOTDIRSRAW=`find -L / -maxdepth 1 -mindepth 1 -type d 2>/dev/null`
SEP=""
for dir in $ROOTDIRSRAW ; do
ROOTDIRS="$ROOTDIRS$SEP$dir"
SEP="|"
done
OURCYGPATTERN="(^($ROOTDIRS))"
# Add a user-defined pattern to the cygpath arguments
if [ "$GRADLE_CYGPATTERN" != "" ] ; then
OURCYGPATTERN="$OURCYGPATTERN|($GRADLE_CYGPATTERN)"
fi
# Now convert the arguments - kludge to limit ourselves to /bin/sh
i=0
for arg in "$@" ; do
CHECK=`echo "$arg"|egrep -c "$OURCYGPATTERN" -`
CHECK2=`echo "$arg"|egrep -c "^-"` ### Determine if an option

if [ $CHECK -ne 0 ] && [ $CHECK2 -eq 0 ] ; then ### Added a condition
eval `echo args$i`=`cygpath --path --ignore --mixed "$arg"`
else
eval `echo args$i`="\"$arg\""
fi
i=$((i+1))
done
case $i in
(0) set -- ;;
(1) set -- "$args0" ;;
(2) set -- "$args0" "$args1" ;;
(3) set -- "$args0" "$args1" "$args2" ;;
(4) set -- "$args0" "$args1" "$args2" "$args3" ;;
(5) set -- "$args0" "$args1" "$args2" "$args3" "$args4" ;;
(6) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" ;;
(7) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" ;;
(8) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" "$args7" ;;
(9) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" "$args7" "$args8" ;;
esac
fi

# Escape application args
save () {
for i do printf %s\\n "$i" | sed "s/'/'\\\\''/g;1s/^/'/;\$s/\$/' \\\\/" ; done
echo " "
}
APP_ARGS=$(save "$@")

# Collect all arguments for the java command, following the shell quoting and substitution rules
eval set -- $DEFAULT_JVM_OPTS $JAVA_OPTS $GRADLE_OPTS "\"-Dorg.gradle.appname=$APP_BASE_NAME\"" -classpath "\"$CLASSPATH\"" org.gradle.wrapper.GradleWrapperMain "$APP_ARGS"

# by default we should be in the correct project dir, but when run from Finder on Mac, the cwd is wrong
if [ "$(uname)" = "Darwin" ] && [ "$HOME" = "$PWD" ]; then
cd "$(dirname "$0")"
fi

exec "$JAVACMD" "$@"
@@ -0,0 +1,84 @@
@if "%DEBUG%" == "" @echo off
@rem ##########################################################################
@rem
@rem Gradle startup script for Windows
@rem
@rem ##########################################################################

@rem Set local scope for the variables with windows NT shell
if "%OS%"=="Windows_NT" setlocal

set DIRNAME=%~dp0
if "%DIRNAME%" == "" set DIRNAME=.
set APP_BASE_NAME=%~n0
set APP_HOME=%DIRNAME%

@rem Add default JVM options here. You can also use JAVA_OPTS and GRADLE_OPTS to pass JVM options to this script.
set DEFAULT_JVM_OPTS=

@rem Find java.exe
if defined JAVA_HOME goto findJavaFromJavaHome

set JAVA_EXE=java.exe
%JAVA_EXE% -version >NUL 2>&1
if "%ERRORLEVEL%" == "0" goto init

echo.
echo ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH.
echo.
echo Please set the JAVA_HOME variable in your environment to match the
echo location of your Java installation.

goto fail

:findJavaFromJavaHome
set JAVA_HOME=%JAVA_HOME:"=%
set JAVA_EXE=%JAVA_HOME%/bin/java.exe

if exist "%JAVA_EXE%" goto init

echo.
echo ERROR: JAVA_HOME is set to an invalid directory: %JAVA_HOME%
echo.
echo Please set the JAVA_HOME variable in your environment to match the
echo location of your Java installation.

goto fail

:init
@rem Get command-line arguments, handling Windows variants

if not "%OS%" == "Windows_NT" goto win9xME_args

:win9xME_args
@rem Slurp the command line arguments.
set CMD_LINE_ARGS=
set _SKIP=2

:win9xME_args_slurp
if "x%~1" == "x" goto execute

set CMD_LINE_ARGS=%*

:execute
@rem Setup the command line

set CLASSPATH=%APP_HOME%\gradle\wrapper\gradle-wrapper.jar

@rem Execute Gradle
"%JAVA_EXE%" %DEFAULT_JVM_OPTS% %JAVA_OPTS% %GRADLE_OPTS% "-Dorg.gradle.appname=%APP_BASE_NAME%" -classpath "%CLASSPATH%" org.gradle.wrapper.GradleWrapperMain %CMD_LINE_ARGS%

:end
@rem End local scope for the variables with windows NT shell
if "%ERRORLEVEL%"=="0" goto mainEnd

:fail
rem Set variable GRADLE_EXIT_CONSOLE if you need the _script_ return code instead of
rem the _cmd.exe /c_ return code!
if not "" == "%GRADLE_EXIT_CONSOLE%" exit 1
exit /b 1

:mainEnd
if "%OS%"=="Windows_NT" endlocal

:omega
@@ -0,0 +1,18 @@
/*
* This settings file was generated by the Gradle 'init' task.
*
* The settings file is used to specify which projects to include in your build.
* In a single project build this file can be empty or even removed.
*
* Detailed information about configuring a multi-project build in Gradle can be found
* in the user guide at https://docs.gradle.org/4.4.1/userguide/multi_project_builds.html
*/

/*
// To declare projects as part of a multi-project build use the 'include' method
include 'shared'
include 'api'
include 'services:webservice'
*/

rootProject.name = 'genetic'
@@ -0,0 +1,40 @@
package pl.czystybeton.genetic;

import pl.czystybeton.genetic.gene.IGene;
import pl.czystybeton.genetic.gene.IOffsetGene;

import java.util.ArrayList;
import java.util.stream.Collectors;

public class Genotype extends ArrayList<IGene> {

public static int compare(IGene g1, IGene g2) {
if (g1 instanceof IOffsetGene && g2 instanceof IOffsetGene) {
return Integer.compare(((IOffsetGene) g1).getOffset(), ((IOffsetGene) g2).getOffset());
}

if (g1 instanceof IOffsetGene) {
return -1;
}

if (g2 instanceof IOffsetGene) {
return 1;
}

return 0;
}

public String toString() {
return this.stream()
.sorted(Genotype::compare)
.map(IGene::toString)
.collect(Collectors.joining(" "));
}

public Genotype clone() {
return stream()
.map(IGene::clone)
.collect(Collectors.toCollection(Genotype::new));
}

}
@@ -0,0 +1,26 @@
package pl.czystybeton.genetic;

public class Individual {

private Genotype genotype;

private double fitness;

public Individual(Genotype genotype, double fitness) {
this.genotype = genotype;
this.fitness = fitness;
}

public Genotype getGenotype() {
return genotype;
}

public double getFitness() {
return fitness;
}

public String toString() {
return String.format("Individual[%.02f %s]", getFitness(), getGenotype());
}

}

0 comments on commit 3335df4

Please sign in to comment.
You can’t perform that action at this time.