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reorganization around GitFlow workflow

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jakebeal
jakebeal committed Jul 2, 2017
1 parent a01586b commit e6c56fbfa3ba32a6f7f6dd8f8e266aef8ddfa8ad
Showing with 8 additions and 3,919 deletions.
  1. +0 −1 Candidate Glyphs/inverter-five-prime.svg
  2. +0 −1 Candidate Glyphs/inverter-three-prime.svg
  3. +0 −1 Candidate Glyphs/spacer.svg
  4. BIN Candidate Glyphs/sticky_restriction_site.png
  5. BIN Candidate Glyphs/sticky_restriction_site.svg.pdf
  6. BIN Candidate Glyphs/three_prime_sticky_restriction_site.pdf
  7. BIN Candidate Realizations/Mappings/SO_GenBank_SBOLV_Pigeon_type_table_051713.docx
  8. +0 −1 Candidate Realizations/Mappings/type_conversion_table.csv
  9. BIN Candidate Realizations/SBOL Visual Omnigraffle Stencil.zip
  10. +0 −3,906 Candidate Realizations/SBOL Visual v.1.0 alpha.graffle
  11. BIN Candidate Realizations/SBOLv1_1.ttf
  12. BIN {1.0.0 → }/Glyphs/JPEG/assembly-scar.jpeg
  13. BIN {1.0.0 → }/Glyphs/JPEG/blunt-restriction-site.jpeg
  14. BIN {1.0.0 → }/Glyphs/JPEG/cds.jpeg
  15. BIN {1.0.0 → }/Glyphs/JPEG/five-prime-overhang.jpeg
  16. BIN {1.0.0 → }/Glyphs/JPEG/five-prime-sticky-restriction-site.jpeg
  17. BIN {1.0.0 → }/Glyphs/JPEG/insulator.jpeg
  18. BIN {1.0.0 → }/Glyphs/JPEG/operator.jpeg
  19. BIN {1.0.0 → }/Glyphs/JPEG/origin-of-replication.jpeg
  20. BIN {1.0.0 → }/Glyphs/JPEG/primer-binding-site.jpeg
  21. BIN {1.0.0 → }/Glyphs/JPEG/promoter.jpeg
  22. BIN {1.0.0 → }/Glyphs/JPEG/protease-site.jpeg
  23. BIN {1.0.0 → }/Glyphs/JPEG/protein-stability-element.jpeg
  24. BIN {1.0.0 → }/Glyphs/JPEG/restriction-enzyme-recognition-site.jpeg
  25. BIN {1.0.0 → }/Glyphs/JPEG/ribonuclease-site.jpeg
  26. BIN {1.0.0 → }/Glyphs/JPEG/ribosome-entry-site.jpeg
  27. BIN {1.0.0 → }/Glyphs/JPEG/rna-stability-element.jpeg
  28. BIN {1.0.0 → }/Glyphs/JPEG/signature.jpeg
  29. BIN {1.0.0 → }/Glyphs/JPEG/terminator.jpeg
  30. BIN {1.0.0 → }/Glyphs/JPEG/three-prime-overhang.jpeg
  31. BIN {1.0.0 → }/Glyphs/JPEG/three-prime-sticky-restriction-site.jpeg
  32. BIN {1.0.0 → }/Glyphs/JPEG/user-defined.jpeg
  33. 0 {1.0.0 → }/Glyphs/LICENSE.html
  34. BIN {1.0.0 → }/Glyphs/PDF/assembly-scar.pdf
  35. BIN {1.0.0 → }/Glyphs/PDF/blunt-restriction-site.pdf
  36. BIN {1.0.0 → }/Glyphs/PDF/cds.pdf
  37. BIN {1.0.0 → }/Glyphs/PDF/five-prime-overhang.pdf
  38. BIN {1.0.0 → }/Glyphs/PDF/five-prime-sticky-restriction-site.pdf
  39. BIN {1.0.0 → }/Glyphs/PDF/insulator.pdf
  40. BIN {1.0.0 → }/Glyphs/PDF/operator.pdf
  41. BIN {1.0.0 → }/Glyphs/PDF/origin-of-replication.pdf
  42. BIN {1.0.0 → }/Glyphs/PDF/primer-binding-site.pdf
  43. BIN {1.0.0 → }/Glyphs/PDF/promoter.pdf
  44. BIN {1.0.0 → }/Glyphs/PDF/protease-site.pdf
  45. BIN {1.0.0 → }/Glyphs/PDF/protein-stability-element.pdf
  46. BIN {1.0.0 → }/Glyphs/PDF/restriction-enzyme-recognition-site.pdf
  47. BIN {1.0.0 → }/Glyphs/PDF/ribonuclease-site.pdf
  48. BIN {1.0.0 → }/Glyphs/PDF/ribosome-entry-site.pdf
  49. BIN {1.0.0 → }/Glyphs/PDF/rna-stability-element.pdf
  50. BIN {1.0.0 → }/Glyphs/PDF/signature.pdf
  51. BIN {1.0.0 → }/Glyphs/PDF/terminator.pdf
  52. BIN {1.0.0 → }/Glyphs/PDF/three-prime-overhang.pdf
  53. BIN {1.0.0 → }/Glyphs/PDF/three-prime-sticky-restriction-site.pdf
  54. BIN {1.0.0 → }/Glyphs/PDF/user-defined.pdf
  55. BIN {1.0.0 → }/Glyphs/PNG/32x32/assembly-scar.png
  56. BIN {1.0.0 → }/Glyphs/PNG/32x32/blunt-restriction-site.png
  57. BIN {1.0.0 → }/Glyphs/PNG/32x32/cds.png
  58. BIN {1.0.0 → }/Glyphs/PNG/32x32/five-prime-overhang.png
  59. BIN {1.0.0 → }/Glyphs/PNG/32x32/five-prime-sticky-restriction-site.png
  60. BIN {1.0.0 → }/Glyphs/PNG/32x32/insulator.png
  61. BIN {1.0.0 → }/Glyphs/PNG/32x32/operator.png
  62. BIN {1.0.0 → }/Glyphs/PNG/32x32/origin-of-replication.png
  63. BIN {1.0.0 → }/Glyphs/PNG/32x32/primer-binding-site.png
  64. BIN {1.0.0 → }/Glyphs/PNG/32x32/promoter.png
  65. BIN {1.0.0 → }/Glyphs/PNG/32x32/protease-site.png
  66. BIN {1.0.0 → }/Glyphs/PNG/32x32/protein-stability-element.png
  67. BIN {1.0.0 → }/Glyphs/PNG/32x32/restriction-enzyme-recognition-site.png
  68. BIN {1.0.0 → }/Glyphs/PNG/32x32/ribonuclease-site.png
  69. BIN {1.0.0 → }/Glyphs/PNG/32x32/ribosome-entry-site.png
  70. BIN {1.0.0 → }/Glyphs/PNG/32x32/rna-stability-element.png
  71. BIN {1.0.0 → }/Glyphs/PNG/32x32/signature.png
  72. BIN {1.0.0 → }/Glyphs/PNG/32x32/terminator.png
  73. BIN {1.0.0 → }/Glyphs/PNG/32x32/three-prime-overhang.png
  74. BIN {1.0.0 → }/Glyphs/PNG/32x32/three-prime-sticky-restriction-site.png
  75. BIN {1.0.0 → }/Glyphs/PNG/32x32/user-defined.png
  76. BIN {1.0.0 → }/Glyphs/PNG/50x50/assembly-scar.png
  77. BIN {1.0.0 → }/Glyphs/PNG/50x50/blunt-restriction-site.png
  78. BIN {1.0.0 → }/Glyphs/PNG/50x50/cds.png
  79. BIN {1.0.0 → }/Glyphs/PNG/50x50/five-prime-overhang.png
  80. BIN {1.0.0 → }/Glyphs/PNG/50x50/five-prime-sticky-restriction-site.png
  81. BIN {1.0.0 → }/Glyphs/PNG/50x50/insulator.png
  82. BIN {1.0.0 → }/Glyphs/PNG/50x50/operator.png
  83. BIN {1.0.0 → }/Glyphs/PNG/50x50/origin-of-replication.png
  84. BIN {1.0.0 → }/Glyphs/PNG/50x50/primer-binding-site.png
  85. BIN {1.0.0 → }/Glyphs/PNG/50x50/promoter.png
  86. BIN {1.0.0 → }/Glyphs/PNG/50x50/protease-site.png
  87. BIN {1.0.0 → }/Glyphs/PNG/50x50/protein-stability-element.png
  88. BIN {1.0.0 → }/Glyphs/PNG/50x50/restriction-enzyme-recognition-site.png
  89. BIN {1.0.0 → }/Glyphs/PNG/50x50/ribonuclease-site.png
  90. BIN {1.0.0 → }/Glyphs/PNG/50x50/ribosome-entry-site.png
  91. BIN {1.0.0 → }/Glyphs/PNG/50x50/rna-stability-element.png
  92. BIN {1.0.0 → }/Glyphs/PNG/50x50/signature.png
  93. BIN {1.0.0 → }/Glyphs/PNG/50x50/terminator.png
  94. BIN {1.0.0 → }/Glyphs/PNG/50x50/three-prime-overhang.png
  95. BIN {1.0.0 → }/Glyphs/PNG/50x50/three-prime-sticky-restriction-site.png
  96. BIN {1.0.0 → }/Glyphs/PNG/50x50/user-defined.png
  97. BIN {1.0.0 → }/Glyphs/PNG/original/assembly-scar.png
  98. BIN {1.0.0 → }/Glyphs/PNG/original/blunt-restriction-site.png
  99. BIN {1.0.0 → }/Glyphs/PNG/original/cds.png
  100. BIN {1.0.0 → }/Glyphs/PNG/original/five-prime-overhang.png
  101. BIN {1.0.0 → }/Glyphs/PNG/original/five-prime-sticky-restriction-site.png
  102. BIN {1.0.0 → }/Glyphs/PNG/original/insulator.png
  103. BIN {1.0.0 → }/Glyphs/PNG/original/operator.png
  104. BIN {1.0.0 → }/Glyphs/PNG/original/origin-of-replication.png
  105. BIN {1.0.0 → }/Glyphs/PNG/original/primer-binding-site.png
  106. BIN {1.0.0 → }/Glyphs/PNG/original/promoter.png
  107. BIN {1.0.0 → }/Glyphs/PNG/original/protease-site.png
  108. BIN {1.0.0 → }/Glyphs/PNG/original/protein-stability-element.png
  109. BIN {1.0.0 → }/Glyphs/PNG/original/restriction-enzyme-recognition-site.png
  110. BIN {1.0.0 → }/Glyphs/PNG/original/ribonuclease-site.png
  111. BIN {1.0.0 → }/Glyphs/PNG/original/ribosome-entry-site.png
  112. BIN {1.0.0 → }/Glyphs/PNG/original/rna-stability-element.png
  113. BIN {1.0.0 → }/Glyphs/PNG/original/signature.png
  114. BIN {1.0.0 → }/Glyphs/PNG/original/terminator.png
  115. BIN {1.0.0 → }/Glyphs/PNG/original/three-prime-overhang.png
  116. BIN {1.0.0 → }/Glyphs/PNG/original/three-prime-sticky-restriction-site.png
  117. BIN {1.0.0 → }/Glyphs/PNG/original/user-defined.png
  118. BIN {1.0.0 → }/Glyphs/SBOL Visual 1.0.0 JPEG.zip
  119. BIN {1.0.0 → }/Glyphs/SBOL Visual 1.0.0 PDF.zip
  120. BIN {1.0.0 → }/Glyphs/SBOL Visual 1.0.0 PNG.zip
  121. BIN {1.0.0 → }/Glyphs/SBOL Visual 1.0.0 SVG.zip
  122. BIN {1.0.0 → }/Glyphs/SBOL Visual.pdf
  123. 0 {1.0.0 → }/Glyphs/SVG/assembly-scar.svg
  124. 0 {1.0.0 → }/Glyphs/SVG/blunt-restriction-site.svg
  125. 0 {1.0.0 → }/Glyphs/SVG/cds.svg
  126. 0 {1.0.0 → }/Glyphs/SVG/five-prime-overhang.svg
  127. 0 {1.0.0 → }/Glyphs/SVG/five-prime-sticky-restriction-site.svg
  128. 0 {1.0.0 → }/Glyphs/SVG/insulator.svg
  129. 0 {1.0.0 → }/Glyphs/SVG/operator.svg
  130. 0 {1.0.0 → }/Glyphs/SVG/origin-of-replication.svg
  131. 0 {1.0.0 → }/Glyphs/SVG/primer-binding-site.svg
  132. 0 {1.0.0 → }/Glyphs/SVG/promoter.svg
  133. 0 {1.0.0 → }/Glyphs/SVG/protease-site.svg
  134. 0 {1.0.0 → }/Glyphs/SVG/protein-stability-element.svg
  135. 0 {1.0.0 → }/Glyphs/SVG/restriction-enzyme-recognition-site.svg
  136. 0 {1.0.0 → }/Glyphs/SVG/ribonuclease-site.svg
  137. 0 {1.0.0 → }/Glyphs/SVG/ribosome-entry-site.svg
  138. 0 {1.0.0 → }/Glyphs/SVG/rna-stability-element.svg
  139. 0 {1.0.0 → }/Glyphs/SVG/signature.svg
  140. 0 {1.0.0 → }/Glyphs/SVG/terminator.svg
  141. 0 {1.0.0 → }/Glyphs/SVG/three-prime-overhang.svg
  142. 0 {1.0.0 → }/Glyphs/SVG/three-prime-sticky-restriction-site.svg
  143. 0 {1.0.0 → }/Glyphs/SVG/user-defined.svg
  144. 0 {1.0.0 → }/Ontology/catalog-v001.xml
  145. 0 {1.0.0 → }/Ontology/lode-test.owl
  146. 0 {1.0.0 → }/Ontology/lode-test2.owl
  147. 0 {1.0.0 → }/Ontology/lode-test3.owl
  148. 0 {1.0.0 → }/Ontology/lode-test4.owl
  149. 0 {1.0.0 → }/Ontology/lode-test5.owl
  150. 0 {1.0.0 → }/Ontology/lode-test6.owl
  151. 0 {1.0.0 → }/Ontology/lode-test7.owl
  152. 0 {1.0.0 → }/Ontology/lode-test8.owl
  153. 0 {1.0.0 → }/Ontology/lode-test9.owl
  154. 0 {1.0.0 → }/Ontology/protege-so-terms.owl
  155. 0 {1.0.0 → }/Ontology/protoge-so.obo
  156. 0 {1.0.0 → }/Ontology/sbol-visual-lode.owl
  157. 0 {1.0.0 → }/Ontology/sbol-visual-v2.obo
  158. 0 {1.0.0 → }/Ontology/sbol-visual-v2.owl
  159. 0 {1.0.0 → }/Ontology/sbol-visual.obo
  160. 0 {1.0.0 → }/Ontology/sbol-visual.owl
  161. 0 {1.0.0 → }/Ontology/so-subset-2.owl
  162. 0 {1.0.0 → }/Ontology/so-subset.obo
  163. 0 {1.0.0 → }/Ontology/so-with-visual-subset.obo
  164. +8 −9 README.md

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