{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":673385242,"defaultBranch":"main","name":"BayModTS","ownerLogin":"Systems-Theory-in-Systems-Biology","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-08-01T14:00:46.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/117910522?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1711445228.0","currentOid":""},"activityList":{"items":[{"before":"8e676c72d64cebb101b45ef32e5322622f7d5553","after":"12e06cb0beecfb710356959b3187290087f2c8dc","ref":"refs/heads/main","pushedAt":"2024-05-28T13:35:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Update README.md\n\nadded publication link","shortMessageHtmlLink":"Update README.md"}},{"before":"c96209d465155e719ccf26f654012514ffacaaef","after":"8e676c72d64cebb101b45ef32e5322622f7d5553","ref":"refs/heads/main","pushedAt":"2024-04-04T13:21:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Update README.md\n\nAdded description of the walk through script","shortMessageHtmlLink":"Update README.md"}},{"before":"d7145026d26182c1cdd873f6bda19dd7b858338e","after":"c96209d465155e719ccf26f654012514ffacaaef","ref":"refs/heads/main","pushedAt":"2024-04-04T13:18:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Created core BayModTS functions and walk-through\n\nThe BayModTS core modules were split into a Measurement_data module, that splits data based on experimental conditions and a baymodts model that contains all steps of the Bayesian Inference and visualization.\n\nA walk-through python script was created to guide users through the BayModTS workflow.","shortMessageHtmlLink":"Created core BayModTS functions and walk-through"}},{"before":"cab8f82a9a2590cd1e23e712ab04013cf147ff5c","after":null,"ref":"refs/heads/walk_through_notebook","pushedAt":"2024-03-26T09:27:08.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"}},{"before":"6f2732c7b4459f48335519fa934cf07d84b8f27d","after":"d7145026d26182c1cdd873f6bda19dd7b858338e","ref":"refs/heads/main","pushedAt":"2024-03-26T09:26:15.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Merge pull request #9 from Systems-Theory-in-Systems-Biology/walk_through_notebook\n\nDeleted files that were created by amici execution","shortMessageHtmlLink":"Merge pull request #9 from Systems-Theory-in-Systems-Biology/walk_thr…"}},{"before":"1bcf0f9c7b4cb2183945679b33af949fa9aa3fff","after":"cab8f82a9a2590cd1e23e712ab04013cf147ff5c","ref":"refs/heads/walk_through_notebook","pushedAt":"2024-03-26T09:21:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Deleted files that were created by amici execution","shortMessageHtmlLink":"Deleted files that were created by amici execution"}},{"before":"281d5ca0f503261dea957410da877c23c5bd337b","after":null,"ref":"refs/heads/pk_model_application_curve","pushedAt":"2024-03-26T09:20:04.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"}},{"before":"93bb26fc154146cb9c479eb8edc1eebff861599c","after":"6f2732c7b4459f48335519fa934cf07d84b8f27d","ref":"refs/heads/main","pushedAt":"2024-03-26T09:19:58.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Merge pull request #8 from Systems-Theory-in-Systems-Biology/pk_model_application_curve\n\nImproved PK models with application curve","shortMessageHtmlLink":"Merge pull request #8 from Systems-Theory-in-Systems-Biology/pk_model…"}},{"before":"a2e35ec26d70eed64f4d83e3666b59f3833db2f3","after":"93bb26fc154146cb9c479eb8edc1eebff861599c","ref":"refs/heads/main","pushedAt":"2024-03-26T09:16:12.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Merge pull request #7 from Systems-Theory-in-Systems-Biology/walk_through_notebook\n\nMake the code reproducible by providing a walk through notebook","shortMessageHtmlLink":"Merge pull request #7 from Systems-Theory-in-Systems-Biology/walk_thr…"}},{"before":"a2e35ec26d70eed64f4d83e3666b59f3833db2f3","after":"1bcf0f9c7b4cb2183945679b33af949fa9aa3fff","ref":"refs/heads/walk_through_notebook","pushedAt":"2024-03-26T09:15:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Make the code reproducible by providing a walk through notebook","shortMessageHtmlLink":"Make the code reproducible by providing a walk through notebook"}},{"before":null,"after":"a2e35ec26d70eed64f4d83e3666b59f3833db2f3","ref":"refs/heads/walk_through_notebook","pushedAt":"2024-03-25T05:58:19.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Fixes error in replicate calculation\n\nReplicateId in PEtab measurements file was calculated wrong","shortMessageHtmlLink":"Fixes error in replicate calculation"}},{"before":"1dfc5bfa5cc15c079add3cd3f20726ea79d817e5","after":"a2e35ec26d70eed64f4d83e3666b59f3833db2f3","ref":"refs/heads/main","pushedAt":"2024-03-20T09:21:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Fixes error in replicate calculation\n\nReplicateId in PEtab measurements file was calculated wrong","shortMessageHtmlLink":"Fixes error in replicate calculation"}},{"before":"1dfc5bfa5cc15c079add3cd3f20726ea79d817e5","after":"281d5ca0f503261dea957410da877c23c5bd337b","ref":"refs/heads/pk_model_application_curve","pushedAt":"2024-03-19T16:03:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"updated application curve model","shortMessageHtmlLink":"updated application curve model"}},{"before":null,"after":"1dfc5bfa5cc15c079add3cd3f20726ea79d817e5","ref":"refs/heads/pk_model_application_curve","pushedAt":"2024-02-15T06:34:45.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/Systems-Theory-in-Systems-Biology/BayModTS","shortMessageHtmlLink":"Merge branch 'main' of https://github.com/Systems-Theory-in-Systems-B…"}},{"before":"1dfc5bfa5cc15c079add3cd3f20726ea79d817e5","after":"7fe9a9017ef4d8f510bb8909d501363a9f9e3053","ref":"refs/heads/pk_model_kabs_cl_coupling","pushedAt":"2024-02-08T16:00:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"related kabs=f*CL","shortMessageHtmlLink":"related kabs=f*CL"}},{"before":null,"after":"1dfc5bfa5cc15c079add3cd3f20726ea79d817e5","ref":"refs/heads/pk_model_kabs_cl_coupling","pushedAt":"2024-02-07T16:42:40.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/Systems-Theory-in-Systems-Biology/BayModTS","shortMessageHtmlLink":"Merge branch 'main' of https://github.com/Systems-Theory-in-Systems-B…"}},{"before":"f1da2b7dfc4cfda6c313f24b89d87518d943b5c4","after":"99da53f380d610a5ea7e64ff7b8a636c5f91f5f2","ref":"refs/heads/pk_models","pushedAt":"2024-02-01T11:42:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Updated caffeine and midazolam initial amounts\n\nupdated Caffeine and Midazolam models with new calculated initialAmounts - change because of different dose","shortMessageHtmlLink":"Updated caffeine and midazolam initial amounts"}},{"before":"b90908d2f5f41b6c6f8ece1cd9f2c8d9e32272c8","after":"1dfc5bfa5cc15c079add3cd3f20726ea79d817e5","ref":"refs/heads/main","pushedAt":"2024-02-01T10:48:53.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/Systems-Theory-in-Systems-Biology/BayModTS","shortMessageHtmlLink":"Merge branch 'main' of https://github.com/Systems-Theory-in-Systems-B…"}},{"before":"1354f9a176c03edbfd27b20023dcaad0c2b8ea91","after":"b90908d2f5f41b6c6f8ece1cd9f2c8d9e32272c8","ref":"refs/heads/main","pushedAt":"2024-01-30T15:31:43.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Update README.md\n\nupdated icon","shortMessageHtmlLink":"Update README.md"}},{"before":"0a846874215ef6d9ab325860c44e6194534d451e","after":"1354f9a176c03edbfd27b20023dcaad0c2b8ea91","ref":"refs/heads/main","pushedAt":"2024-01-30T15:30:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Update README.md\n\nAdded BayModTS icon","shortMessageHtmlLink":"Update README.md"}},{"before":"8e2785861ad98d39ae84b132bb05633a24220595","after":"0a846874215ef6d9ab325860c44e6194534d451e","ref":"refs/heads/main","pushedAt":"2024-01-29T13:48:05.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/Systems-Theory-in-Systems-Biology/BayModTS","shortMessageHtmlLink":"Merge branch 'main' of https://github.com/Systems-Theory-in-Systems-B…"}},{"before":"143dde013893d51f5ed7dcae107a3c78829539cd","after":null,"ref":"refs/heads/liver_volume","pushedAt":"2024-01-25T12:07:30.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"}},{"before":"0fdb7606fa54ed6f0d6cfd7643c7f564b8ebdd34","after":"8e2785861ad98d39ae84b132bb05633a24220595","ref":"refs/heads/main","pushedAt":"2024-01-25T12:07:26.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Merge pull request #6 from Systems-Theory-in-Systems-Biology/liver_volume\n\nChanged RTD identical response times to different response times","shortMessageHtmlLink":"Merge pull request #6 from Systems-Theory-in-Systems-Biology/liver_vo…"}},{"before":"0fdb7606fa54ed6f0d6cfd7643c7f564b8ebdd34","after":"143dde013893d51f5ed7dcae107a3c78829539cd","ref":"refs/heads/liver_volume","pushedAt":"2024-01-25T12:07:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Changed RTD identical response times to different response times\n\nChanged SBML model and included a different parameter file for each condition as the range of the data is not the equal.","shortMessageHtmlLink":"Changed RTD identical response times to different response times"}},{"before":null,"after":"0fdb7606fa54ed6f0d6cfd7643c7f564b8ebdd34","ref":"refs/heads/liver_volume","pushedAt":"2024-01-25T12:05:12.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Update BayModTS_steatosis.py\n\nupdated steatosis visualisation","shortMessageHtmlLink":"Update BayModTS_steatosis.py"}},{"before":"fe59f41d5a08fb6081b7a35fbdddfa0a9dc0e084","after":"0fdb7606fa54ed6f0d6cfd7643c7f564b8ebdd34","ref":"refs/heads/main","pushedAt":"2024-01-25T12:04:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Update BayModTS_steatosis.py\n\nupdated steatosis visualisation","shortMessageHtmlLink":"Update BayModTS_steatosis.py"}},{"before":"c19113d9176209718bbc4b1d2d8951b44996b898","after":"fe59f41d5a08fb6081b7a35fbdddfa0a9dc0e084","ref":"refs/heads/main","pushedAt":"2024-01-18T08:18:18.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/Systems-Theory-in-Systems-Biology/BayModTS","shortMessageHtmlLink":"Merge branch 'main' of https://github.com/Systems-Theory-in-Systems-B…"}},{"before":"99f1911b58707534aed68238cbf31a2b688273c3","after":"c19113d9176209718bbc4b1d2d8951b44996b898","ref":"refs/heads/main","pushedAt":"2024-01-18T08:16:13.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Merge pull request #5 from Systems-Theory-in-Systems-Biology/pk_models\n\nAdded executable BayModTS skript","shortMessageHtmlLink":"Merge pull request #5 from Systems-Theory-in-Systems-Biology/pk_models"}},{"before":"0a408214c3693894f726351f704fd3642c0e2155","after":"f1da2b7dfc4cfda6c313f24b89d87518d943b5c4","ref":"refs/heads/pk_models","pushedAt":"2024-01-18T08:15:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"},"commit":{"message":"Added executable BayModTS skript","shortMessageHtmlLink":"Added executable BayModTS skript"}},{"before":"5b232b792558c1abb00b7a40a3ef3e246348fed9","after":null,"ref":"refs/heads/mri_example","pushedAt":"2024-01-15T09:09:38.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"shoepfl","name":"Sebastian Höpfl","path":"/shoepfl","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/66028655?s=80&v=4"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEVeXs7gA","startCursor":null,"endCursor":null}},"title":"Activity · Systems-Theory-in-Systems-Biology/BayModTS"}