From 9031708a46fc4827dd88fe853fd374a5d2a1ab15 Mon Sep 17 00:00:00 2001 From: BaumgartenNina <46556394+BaumgartenNina@users.noreply.github.com> Date: Sat, 18 Apr 2020 22:49:25 +0200 Subject: [PATCH] Update ApplicationScenario.rst --- docs/ApplicationScenario.rst | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/ApplicationScenario.rst b/docs/ApplicationScenario.rst index 471f5e87..242ae633 100644 --- a/docs/ApplicationScenario.rst +++ b/docs/ApplicationScenario.rst @@ -30,7 +30,7 @@ TODO: add screenshot How to use EpiRegio to identify enriched TFs of a set of genes of interest ================= -The application scenario is based on the section *Identify enriched transcription factors of differentially expressed genes* from our paper. To perform the analysis `bedtools `_ must be installed on your machine. In addition, we provide a GitHub repository (add link) with an example file, the TF binding motifs and the motif enrichment tool `PASTAA `_, which we use in Step 4. To clone the repository use:: +The application scenario is based on the section *Identify enriched transcription factors of differentially expressed genes* from our paper. To perform the analysis python3 and `bedtools `_ must be installed on your machine. In addition, we provide a GitHub repository (add link) with an example file, the TF binding motifs and the motif enrichment tool `PASTAA `_, which we use in Step 4. To clone the repository use:: TODO: add command