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Add SHP_box
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nicoleruiz committed Dec 15, 2016
1 parent 92e3cae commit 4720fb9
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Showing 38 changed files with 14,390 additions and 13,904 deletions.
146 changes: 73 additions & 73 deletions releases/so-xp.owl/so-metadata.txt
@@ -1,77 +1,77 @@
NUMBER_OF_CLASSES.INCLUDE_IMPORT_CLOSURE=true 2376
NUMBER_OF_NON_DEPRECATED_CLASSES.INCLUDE_IMPORT_CLOSURE=true 2172
NUMBER_OF_CLASSES.INCLUDE_IMPORT_CLOSURE=false 2376
NUMBER_OF_NON_DEPRECATED_CLASSES.INCLUDE_IMPORT_CLOSURE=false 2172
NUMBER_OF_AXIOMS.AXIOM_TYPE=AnnotationAssertion 16490
NUMBER_OF_CLASSES.INCLUDE_IMPORT_CLOSURE=true 2377
NUMBER_OF_NON_DEPRECATED_CLASSES.INCLUDE_IMPORT_CLOSURE=true 2173
NUMBER_OF_CLASSES.INCLUDE_IMPORT_CLOSURE=false 2377
NUMBER_OF_NON_DEPRECATED_CLASSES.INCLUDE_IMPORT_CLOSURE=false 2173
NUMBER_OF_AXIOMS.AXIOM_TYPE=EquivalentClasses 221
NUMBER_OF_AXIOMS.AXIOM_TYPE=SubClassOf 2856
NUMBER_OF_AXIOMS.AXIOM_TYPE=DisjointClasses 2
NUMBER_OF_AXIOMS.AXIOM_TYPE=SubClassOf 2855
NUMBER_OF_AXIOMS.AXIOM_TYPE=AnnotationAssertion 16490
NUMBER_OF_AXIOMS.AXIOM_TYPE=AnnotationAssertion 16497
NUMBER_OF_AXIOMS.AXIOM_TYPE=EquivalentClasses 221
NUMBER_OF_AXIOMS.AXIOM_TYPE=SubClassOf 2856
NUMBER_OF_AXIOMS.AXIOM_TYPE=DisjointClasses 2
NUMBER_OF_AXIOMS.AXIOM_TYPE=SubClassOf 2855
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasRelatedSynonym 'has_related_synonym' 0: 297 (0.13674033) 1+: 1875 (0.8632597) >1: 51 (0.023480663)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=comment comment 0: 430 (0.19797422) 1+: 1742 (0.8020258) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=created_by created_by 0: 673 (0.30985266) 1+: 1499 (0.69014734) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=creation_date creation_date 0: 673 (0.30985266) 1+: 1499 (0.69014734) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasAlternativeId 'has_alternative_id' 0: 114 (0.05248619) 1+: 2058 (0.9475138) >1: 5 (0.0023020257)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasNarrowSynonym 'has_narrow_synonym' 0: 16 (0.0073664826) 1+: 2156 (0.9926335) >1: 6 (0.002762431)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=inSubset 'in_subset' 0: 364 (0.16758747) 1+: 1808 (0.83241254) >1: 9 (0.0041436465)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=IAO:0000115 'definition' 0: 1946 (0.8959484) 1+: 226 (0.10405157) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasDbXref 'database_cross_reference' 0: 446 (0.2053407) 1+: 1726 (0.7946593) >1: 39 (0.0179558)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=id id 0: 2172 (1.0) 1+: 0 (0.0) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasBroadSynonym 'has_broad_synonym' 0: 8 (0.0036832413) 1+: 2164 (0.99631673) >1: 2 (9.2081033E-4)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasOBONamespace 'has_obo_namespace' 0: 2172 (1.0) 1+: 0 (0.0) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasExactSynonym 'has_exact_synonym' 0: 1935 (0.890884) 1+: 237 (0.109116025) >1: 725 (0.33379373)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=label label 0: 2172 (1.0) 1+: 0 (0.0) >1: 0 (0.0)
AXIOM_TYPE SymmetricObjectProperty EquivalentClasses TransitiveObjectProperty SubClassOf Declaration SubObjectPropertyOf
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=paralogous_to 'paralogous_to' 1 0 0 0 1 1
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=genome_of 'genome_of' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=recombined_to 'recombined_to' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=recombined_from 'recombined_from' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=part_of 'part_of' 0 5 1 174 1 2
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=disconnected_from 'disconnected_from' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=integral_part_of 'integral_part_of' 0 0 0 0 1 1
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=orthologous_to 'orthologous_to' 1 0 0 0 1 1
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=exemplar_of 'exemplar_of' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=has_integral_part 'has_integral_part' 0 0 0 0 1 1
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=similar_to 'similar_to' 1 0 0 0 1 1
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=transcribed_to 'transcribed_to' 0 7 0 7 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=guides 'guides' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=position_of 'position_of' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=variant_of 'variant_of' 0 0 0 3 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=non_functional_homolog_of 'non_functional_homolog_of' 0 0 0 4 1 1
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=contained_by 'contained_by' 0 0 1 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=trans_spliced_to 'trans_spliced_to' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=translates_to 'translates_to' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=transcribed_from 'transcribed_from' 0 1 0 1 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=contains 'contains' 0 2 1 3 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=has_origin 'has_origin' 0 29 0 29 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=finishes 'finishes' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=complete_evidence_for_feature 'complete_evidence_for_feature' 0 0 1 0 1 1
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=derives_from 'derives_from' 0 6 1 46 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=connects_on 'connects_on' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=processed_into 'processed_into' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=trans_spliced_from 'trans_spliced_from' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=starts 'starts' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=has_quality 'has_quality' 0 158 0 164 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=member_of 'member_of' 0 0 1 3 1 1
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=is_consecutive_sequence_of 'is_consecutive_sequence_of' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=evidence_for_feature 'evidence_for_feature' 0 0 1 0 1 2
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=guided_by 'guided_by' 0 0 0 1 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=gained 'gained' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=partial_evidence_for_feature 'partial_evidence_for_feature' 0 0 0 0 1 1
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=has_part 'has_part' 0 15 0 150 1 1
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=finished_by 'finished_by' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=lost 'lost' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=overlaps 'overlaps' 0 0 0 1 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=associated_with 'associated_with' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=maximally_overlaps 'maximally_overlaps' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=sequence_of 'sequence_of' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=translation_of 'translation_of' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=edited_from 'edited_from' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=started_by 'started_by' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=homologous_to 'homologous_to' 1 0 0 0 1 4
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=processed_from 'processed_from' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=edited_to 'edited_to' 0 0 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=adjacent_to 'adjacent_to' 0 4 0 6 1 0
NUMBER_OF_AXIOMS.AXIOM_TYPE=AnnotationAssertion 16497
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasRelatedSynonym 'has_related_synonym' 0: 297 (0.1366774) 1+: 1876 (0.8633226) >1: 51 (0.023469858)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=comment comment 0: 430 (0.19788311) 1+: 1743 (0.8021169) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=created_by created_by 0: 674 (0.31017026) 1+: 1499 (0.6898297) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=creation_date creation_date 0: 674 (0.31017026) 1+: 1499 (0.6898297) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasAlternativeId 'has_alternative_id' 0: 114 (0.052462034) 1+: 2059 (0.94753796) >1: 5 (0.0023009663)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasNarrowSynonym 'has_narrow_synonym' 0: 16 (0.0073630926) 1+: 2157 (0.9926369) >1: 6 (0.0027611598)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=inSubset 'in_subset' 0: 364 (0.16751036) 1+: 1809 (0.83248967) >1: 9 (0.0041417396)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=IAO:0000115 'definition' 0: 1947 (0.89599633) 1+: 226 (0.10400368) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasDbXref 'database_cross_reference' 0: 446 (0.20524621) 1+: 1727 (0.7947538) >1: 39 (0.017947538)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=id id 0: 2173 (1.0) 1+: 0 (0.0) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasBroadSynonym 'has_broad_synonym' 0: 8 (0.0036815463) 1+: 2165 (0.99631846) >1: 2 (9.203866E-4)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasOBONamespace 'has_obo_namespace' 0: 2173 (1.0) 1+: 0 (0.0) >1: 0 (0.0)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=hasExactSynonym 'has_exact_synonym' 0: 1936 (0.89093417) 1+: 237 (0.10906581) >1: 725 (0.33364013)
NUMBER_OF_NON_DEPRECATED_CLASSES.ANNOTATION_PROPERTY=label label 0: 2173 (1.0) 1+: 0 (0.0) >1: 0 (0.0)
AXIOM_TYPE EquivalentClasses Declaration SubClassOf SymmetricObjectProperty SubObjectPropertyOf TransitiveObjectProperty
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=paralogous_to 'paralogous_to' 0 1 0 1 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=genome_of 'genome_of' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=recombined_to 'recombined_to' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=recombined_from 'recombined_from' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=part_of 'part_of' 5 1 174 0 2 1
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=disconnected_from 'disconnected_from' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=integral_part_of 'integral_part_of' 0 1 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=orthologous_to 'orthologous_to' 0 1 0 1 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=exemplar_of 'exemplar_of' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=has_integral_part 'has_integral_part' 0 1 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=similar_to 'similar_to' 0 1 0 1 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=transcribed_to 'transcribed_to' 7 1 7 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=guides 'guides' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=position_of 'position_of' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=variant_of 'variant_of' 0 1 3 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=non_functional_homolog_of 'non_functional_homolog_of' 0 1 4 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=contained_by 'contained_by' 0 1 0 0 0 1
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=trans_spliced_to 'trans_spliced_to' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=translates_to 'translates_to' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=transcribed_from 'transcribed_from' 1 1 1 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=contains 'contains' 2 1 3 0 0 1
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=has_origin 'has_origin' 29 1 29 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=finishes 'finishes' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=complete_evidence_for_feature 'complete_evidence_for_feature' 0 1 0 0 1 1
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=derives_from 'derives_from' 6 1 46 0 0 1
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=connects_on 'connects_on' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=processed_into 'processed_into' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=trans_spliced_from 'trans_spliced_from' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=starts 'starts' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=has_quality 'has_quality' 158 1 164 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=member_of 'member_of' 0 1 3 0 1 1
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=is_consecutive_sequence_of 'is_consecutive_sequence_of' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=evidence_for_feature 'evidence_for_feature' 0 1 0 0 2 1
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=guided_by 'guided_by' 0 1 1 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=gained 'gained' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=partial_evidence_for_feature 'partial_evidence_for_feature' 0 1 0 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=has_part 'has_part' 15 1 150 0 1 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=finished_by 'finished_by' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=lost 'lost' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=overlaps 'overlaps' 0 1 1 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=associated_with 'associated_with' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=maximally_overlaps 'maximally_overlaps' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=sequence_of 'sequence_of' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=translation_of 'translation_of' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=edited_from 'edited_from' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=started_by 'started_by' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=homologous_to 'homologous_to' 0 1 0 1 4 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=processed_from 'processed_from' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=edited_to 'edited_to' 0 1 0 0 0 0
NUMBER_OF_AXIOMS.OBJECT_PROPERTY=adjacent_to 'adjacent_to' 4 1 6 0 0 0

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