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HumanDO.obo.gz
MGI_DO.rpt.gz
MGI_GenomeFeature_forSynteny.gff3.gz
MMHomologs.tsv.gz
MPheno_OBO.ontology.gz
MouseMP_to_gene.txt.gz
MouseMineSynteny.blocks.gz
NCBI_Human_forSynteny.gff3.gz
QTL_JBrowse.gff3.gz
README.md
gene_association.mgi.gz
go-basic.obo.gz
goa_human.gaf.gz

README.md

Data File Summaries

Below are brief descriptions of the source files used to load a database. All files are compressed so they will need to be decompressed if you want to look at their contents.

  • gene_association.mgi.gz - file mapping mouse genes to GO terms
  • go-basic.obo.gz - file containing GO term data
  • goa_human.gaf.gz - file mapping human genes to GO terms
  • HumanDO.obo.gz - file containing DO term data
  • MGI_DO.rpt.gz - file mapping both mouse and human genes to DO terms
  • MGI_GenomeFeature_forSynteny.gff3.gz - file containing mouse transcript and exon annotations
  • MMHomologs.tsv.gz - file containing homolog data
  • MouseMineSynteny.blocks.gz - file containing syntenic block data
  • MouseMP_to_gene.txt.gz - file mapping mouse genes to MP terms
  • MPheno_OBO.ontology.gz - file containing MP term data
  • NCBI_Human_forSynteny.gff3.gz - file containing human transcript and exon annotations
  • QTL_JBrowse.gff3.gz - file containing mouse QTL data
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