UC-Davis Molecular Computing Group

Repositories

• scadnano-python-package

  Python scripting library for generating designs readable by scadnano.

  dna-sequences cadnano dna-origami dna-structures
  Python MIT 6 7 20 1 Updated Aug 3, 2021

• scadnano

  Web application for designing DNA structures such as DNA origami.

  dna-sequences cadnano dna-origami dna-structures
  Dart MIT 7 10 143 (5 issues need help) 3 Updated Aug 3, 2021

• dsd

  DNA sequence designer
  Jupyter Notebook MIT 1 0 17 0 Updated Aug 3, 2021

• simd-dna

  A Python simulator for the SIMD||DNA model of computation, as defined in the paper https://doi.org/10.1007/978-3-030-26807-7_12
  Python 0 0 0 0 Updated Jul 29, 2021

• ppsim

  Python package for simulating population protocols
  Python MIT 1 2 8 0 Updated Jul 21, 2021

• simd-dna-web-simulator

  A visual simulator for the SIMD||DNA model
  JavaScript 0 0 0 0 Updated Apr 21, 2021