diff --git a/packages/libs/components/src/stories/plots/VolcanoPlot.stories.tsx b/packages/libs/components/src/stories/plots/VolcanoPlot.stories.tsx index 5eca64288d..4af1ee0693 100755 --- a/packages/libs/components/src/stories/plots/VolcanoPlot.stories.tsx +++ b/packages/libs/components/src/stories/plots/VolcanoPlot.stories.tsx @@ -191,7 +191,7 @@ Simple.args = { export const ManyPoints = Template.bind({}); ManyPoints.args = { data: dataSetVolcanoManyPoints, - markerBodyOpacity: 0.5, + markerBodyOpacity: 0.8, log2FoldChangeThreshold: 3, significanceThreshold: 0.01, independentAxisRange: { min: -9, max: 9 }, diff --git a/packages/libs/components/src/types/plots/addOns.ts b/packages/libs/components/src/types/plots/addOns.ts index 68131409d8..00480ff4bb 100644 --- a/packages/libs/components/src/types/plots/addOns.ts +++ b/packages/libs/components/src/types/plots/addOns.ts @@ -334,9 +334,9 @@ export type SignificanceColors = { low: string; }; export const significanceColors: SignificanceColors = { - inconclusive: '#B5B8B4', - high: '#AC3B4E', - low: '#0E8FAB', + inconclusive: '#8f8f8f', + high: '#a8484b', + low: '#007F5C', }; /** truncated axis flags */ diff --git a/packages/libs/eda/src/lib/core/components/visualizations/implementations/VolcanoPlotVisualization.tsx b/packages/libs/eda/src/lib/core/components/visualizations/implementations/VolcanoPlotVisualization.tsx index 38cd962eaf..00b1c5a63f 100755 --- a/packages/libs/eda/src/lib/core/components/visualizations/implementations/VolcanoPlotVisualization.tsx +++ b/packages/libs/eda/src/lib/core/components/visualizations/implementations/VolcanoPlotVisualization.tsx @@ -57,7 +57,7 @@ import { fixVarIdLabel } from '../../../utils/visualization'; const DEFAULT_SIG_THRESHOLD = 0.05; const DEFAULT_FC_THRESHOLD = 2; -const DEFAULT_MARKER_OPACITY = 0.7; +const DEFAULT_MARKER_OPACITY = 0.8; /** * The padding ensures we don't clip off part of the glyphs that represent the most extreme points. * We could have also used d3.scale.nice but then we dont have precise control of where the extremes