PSMs Workflow ID PSMs Peptide ID Checked Tags Confidence Identifying Node Type Identifying Node Search ID Identifying Node No PSM Ambiguity Sequence Annotated Sequence Modifications Number of Proteins Master Protein Accessions Master Protein Descriptions Protein Accessions Protein Descriptions Number of Missed Cleavages Charge Original Precursor Charge Delta Score Delta Cn Rank Search Engine Rank Concatenated Rank mz in Da MHplus in Da Theo MHplus in Da Delta M in ppm Delta mz in Da Ions Matched Matched Ions Total Ions Intensity Activation Type NCE in Percent MS Order Isolation Interference in Percent Average Reporter SN Ion Inject Time in ms RT in min First Scan Last Scan Master Scans Spectrum File File ID Abundance: 126 Abundance: 127 Abundance: 128 Abundance: 129 Abundance: 130 Abundance: 131 Quan Info Peptides Matched XCorr Number of Protein Groups Contaminant Percolator q-Value Percolator PEP Percolator SVMScore -250 91 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AREEHER [K].aREEHER.[A] N-Term(TMT6plex) 6 Q3U9V1 TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1 F8WJK8; Q3U9V1; Q3U8D2; Q3U3N7; Q3TGW8; Q99L47 Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1 1 3 3 0.3631 0 1 1 1 385.87341 1155.60569 1155.6068 -0.96 -0.00037 0/0 0 0 194788.5625 HCD 30 MS2 6.735508 16.9 110 22.9412 3413 3413 3412 QEplus033719.raw F4 68.5 3.8 7.6 5.6 4 11.8 134 1.79 1 FALSE 0.001744 0.02972 0.218 -250 111 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRQEQQQQQQQQR [R].rRQEQQQQQQQQR.[Q] N-Term(TMT6plex) 3 Q9ESU6 Bromodomain-containing protein 4 OS=Mus musculus OX=10090 GN=Brd4 PE=1 SV=2 Q9ESU6; Q8BS78; Q3UH70 Bromodomain-containing protein 4 OS=Mus musculus OX=10090 GN=Brd4 PE=1 SV=2; BRD4_CDT domain-containing protein OS=Mus musculus OX=10090 GN=Brd4 PE=2 SV=1; Bromodomain-containing protein 4 OS=Mus musculus OX=10090 GN=Brd4 PE=1 SV=1 2 4 4 0.567 0 1 1 1 500.2688 1998.05337 1998.0539 -0.27 -0.00013 0/0 0 0 294309.6875 HCD 30 MS2 1.89579 110 22.9641 3419 3419 3417 QEplus033719.raw F4 338 1.94 1 FALSE 0.001886 0.03195 0.207 -250 136 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HDRDDRPR [R].hDRDDRPR.[Q] N-Term(TMT6plex) 3 Q3MI48 Junctional sarcoplasmic reticulum protein 1 OS=Mus musculus OX=10090 GN=Jsrp1 PE=1 SV=2 Q3MI48; M0QW57; Q3MI48-2 Junctional sarcoplasmic reticulum protein 1 OS=Mus musculus OX=10090 GN=Jsrp1 PE=1 SV=2; Junctional sarcoplasmic reticulum protein 1 OS=Mus musculus OX=10090 GN=Jsrp1 PE=1 SV=1; Isoform 2 of Junctional sarcoplasmic reticulum protein 1 OS=Mus musculus OX=10090 GN=Jsrp1 1 3 3 0.6316 0 1 1 1 432.56348 1295.67588 1295.67661 -0.57 -0.00024 0/0 0 0 231330.8906 HCD 30 MS2 17.44365 21.1 110 22.9894 3426 3426 3424 QEplus033719.raw F4 35.3 3.9 10.6 44.8 7 25.3 205 3.04 1 FALSE 1.14E-05 3.06E-05 0.955 -250 142 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RREEEER [RK].rREEEER.[REWQ] N-Term(TMT6plex) 28 F8WHT3; A0A0A0MQ79; B2RUG7; Q5SUF2; Q5DTJ4; G3UWR2 Protein PRRC2B OS=Mus musculus OX=10090 GN=Prrc2b PE=1 SV=1;Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1;Zinc finger RNA binding protein OS=Mus musculus OX=10090 GN=Zfr PE=2 SV=1;Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1;MKIAA4178 protein (Fragment) OS=Mus musculus OX=10090 GN=Prrc2a PE=2 SV=1;GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1 Q9CRP1; F7A7G1; Q5SUF2-2; F8WHT3; Q5SUF2-3; A0A0A0MQ79; Q9CRP0; F7AYW2; G3UYR9; B2RUG7; S4R294; Q5SUF2; Q7TPM1; S4R2E2; A0A1L1SR96; Q9CRU5; G3UX48; S4R2J9; G3UZX7; Q5DTJ4; Q3TLH4; G3UWR2; O88532; G3UYG6; Q6Y7W8; Q7TSC1; Q3TLH4-5; Q6PB70 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Prrc2a PE=2 SV=3; Luc7-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1; Isoform 2 of Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3; Protein PRRC2B OS=Mus musculus OX=10090 GN=Prrc2b PE=1 SV=1; Isoform 3 of Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Prrc2a PE=2 SV=3; Protein PRRC2B (Fragment) OS=Mus musculus OX=10090 GN=Prrc2b PE=1 SV=1; GRB10-interacting GYF protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; Zinc finger RNA binding protein OS=Mus musculus OX=10090 GN=Zfr PE=2 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1; Protein PRRC2B OS=Mus musculus OX=10090 GN=Prrc2b PE=1 SV=1; Protein PRRC2C (Fragment) OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=2; Anoctamin OS=Mus musculus OX=10090 GN=Ano8 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Prrc2a PE=2 SV=3; Protein PRRC2A OS=Mus musculus OX=10090 GN=Prrc2a PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; GRB10-interacting GYF protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; MKIAA4178 protein (Fragment) OS=Mus musculus OX=10090 GN=Prrc2a PE=2 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=3; GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; Zinc finger RNA-binding protein OS=Mus musculus OX=10090 GN=Zfr PE=1 SV=2; GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=2; Protein PRRC2A OS=Mus musculus OX=10090 GN=Prrc2a PE=1 SV=1; Isoform 5 of Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c; Anoctamin-8 OS=Mus musculus OX=10090 GN=Ano8 PE=1 SV=3 2 3 3 0.2202 0 1 1 2 411.55591 1232.65317 1232.65448 -1.06 -0.00044 0/0 0 0 174650.8125 HCD 30 MS2 0 8.2 110 22.9944 3428 3428 3424 QEplus033719.raw F4 29.6 4.8 4.6 4 6.4 243 1.68 6 FALSE 0.003092 0.06009 0.114 -250 159 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHPAHER [K].eHPAHER.[V] N-Term(TMT6plex) 1 Q9JIF7 Coatomer subunit beta OS=Mus musculus OX=10090 GN=Copb1 PE=1 SV=1 Q9JIF7 Coatomer subunit beta OS=Mus musculus OX=10090 GN=Copb1 PE=1 SV=1 0 3 3 0.6566 0 1 1 1 368.86285 1104.57401 1104.57477 -0.69 -0.00025 0/0 0 0 336693.9375 HCD 30 MS2 27.09827 11.5 110 23.0172 3434 3434 3431 QEplus033719.raw F4 43.5 3 3.6 4.4 6.7 7.9 208 2.97 1 FALSE 1.14E-05 0.0003493 0.753 -250 166 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HPHHYHQG [R].hPHHYHQG.[-] N-Term(TMT6plex) 1 Q3TVI8 Pre-B-cell leukemia transcription factor-interacting protein 1 OS=Mus musculus OX=10090 GN=Pbxip1 PE=1 SV=2 Q3TVI8 Pre-B-cell leukemia transcription factor-interacting protein 1 OS=Mus musculus OX=10090 GN=Pbxip1 PE=1 SV=2 0 3 3 0.8523 0 1 1 1 414.54199 1241.61142 1241.61255 -0.91 -0.00038 0/0 0 0 168875.9219 HCD 30 MS2 0 5.7 110 23.0197 3435 3435 3431 QEplus033719.raw F4 9.1 2.2 4.5 8 10.1 86 2.64 1 FALSE 0.0001504 0.003321 0.547 -250 174 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNAGGMHHHR [R].gNAGGmHHHR.[I] N-Term(TMT6plex); M6(Oxidation) 1 P14115 60S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5 P14115 60S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5 0 3 3 0.7054 0 1 1 1 440.21725 1318.63721 1318.63845 -0.94 -0.00041 0/0 0 0 142013.4063 HCD 30 MS2 35.28827 9.4 110 23.0222 3436 3436 3431 QEplus033719.raw F4 11.1 9 8.4 7.9 14.6 5.2 68 2.24 1 FALSE 1.14E-05 0.0009031 0.671 -250 207 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSDTDSDRREDDR [R].hSDTDSDRREDDR.[S] N-Term(TMT6plex) 2 Q8BU14 Translocation protein SEC62 OS=Mus musculus OX=10090 GN=Sec62 PE=1 SV=1 Q8BU14; Q8CIK3 Translocation protein SEC62 OS=Mus musculus OX=10090 GN=Sec62 PE=1 SV=1; Translocation protein SEC62 (Fragment) OS=Mus musculus OX=10090 GN=Sec62 PE=2 SV=1 2 4 4 0.7606 0 1 1 1 458.96323 1832.83108 1832.83206 -0.54 -0.00025 0/0 0 0 119407.6328 HCD 30 MS2 23.69599 2.2 110 23.1315 3461 3461 3460 QEplus033719.raw F4 3.4 4.7 3.5 1.9 35 1.42 1 FALSE 0.004816 0.08419 0.05 -250 234 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RREEQEAR [R].rREEQEAR.[E] N-Term(TMT6plex) 5 A2AJI0 MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1 A2AJI1; A2AJI0; A2AJI0-2; F6WF36; A8Y5P4 MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1; MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1; Isoform 2 of MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1; MAP7 domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1; MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1 2 3 3 0.4047 0 1 1 1 434.90695 1302.7063 1302.70758 -0.98 -0.00042 0/0 0 0 264067 HCD 30 MS2 34.61578 23 110 23.1926 3476 3476 3473 QEplus033719.raw F4 58 11.5 15.3 13.3 22.3 17.9 333 2.15 1 FALSE 0.0003408 0.006452 0.469 -250 271 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGDNREHPNEQ [K].hGDNREHPNEQ.[-] N-Term(TMT6plex) 4 Q3UIX8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctbp2 PE=2 SV=1 Q3UIX8; P56546; Q91YZ2; P56546-2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctbp2 PE=2 SV=1; C-terminal-binding protein 2 OS=Mus musculus OX=10090 GN=Ctbp2 PE=1 SV=2; C-terminal-binding protein 2 OS=Mus musculus OX=10090 GN=Ctbp2 PE=1 SV=1; Isoform 2 of C-terminal-binding protein 2 OS=Mus musculus OX=10090 GN=Ctbp2 1 3 3 0.8583 0 1 1 1 521.24799 1561.7294 1561.7305 -0.7 -0.00036 0/0 0 0 248070.2188 HCD 30 MS2 18.38784 9.9 110 23.2456 3491 3491 3488 QEplus033719.raw F4 15.5 6.6 12.5 6.2 10.6 7.8 38 2.4 1 FALSE 0.003793 0.07166 0.083 -250 281 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HCNDHRPESR [K].hcNDHRPESR.[R] N-Term(TMT6plex); C2(Carbamidomethyl) 4 A0A5F8MPY1 A disintegrin and metalloproteinase with thrombospondin motifs 2 OS=Mus musculus OX=10090 GN=Adamts2 PE=1 SV=1 Q1LZL1; A0A5F8MPY1; Q8C9W3; Q5DTQ6 Adamts2 protein (Fragment) OS=Mus musculus OX=10090 GN=Adamts2 PE=2 SV=1; A disintegrin and metalloproteinase with thrombospondin motifs 2 OS=Mus musculus OX=10090 GN=Adamts2 PE=1 SV=1; A disintegrin and metalloproteinase with thrombospondin motifs 2 OS=Mus musculus OX=10090 GN=Adamts2 PE=1 SV=2; MKIAA4060 protein (Fragment) OS=Mus musculus OX=10090 GN=Adamts2 PE=2 SV=1 0 4 4 0.5812 0 1 1 1 384.93762 1536.72866 1536.72872 -0.04 -0.00002 0/0 0 0 43647.69531 HCD 30 MS2 73.31136 5.7 110 23.2659 3496 3496 3495 QEplus033719.raw F4 11.8 4.1 5.5 2.9 6.9 3 56 1.6 1 FALSE 0.001567 0.02391 0.251 -250 288 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNAGGMHHHR [R].gNAGGMHHHR.[I] N-Term(TMT6plex) 1 P14115 60S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5 P14115 60S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5 0 3 3 0.7606 0 1 1 1 434.88525 1302.64121 1302.64354 -1.79 -0.00078 0/0 0 0 380324 HCD 30 MS2 54.39212 30.5 110 23.2685 3497 3497 3495 QEplus033719.raw F4 70 18.4 25 17.5 29.6 22.7 81 3.3 1 FALSE 1.14E-05 0.0004048 0.74 -250 307 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEECSRPHNGR [K].hEEcSRPHNGR.[W] N-Term(TMT6plex); C4(Carbamidomethyl) 2 D3Z132 THO complex subunit 6 homolog OS=Mus musculus OX=10090 GN=Thoc6 PE=1 SV=1 D3Z132; Q5U4D9 THO complex subunit 6 homolog OS=Mus musculus OX=10090 GN=Thoc6 PE=1 SV=1; THO complex subunit 6 homolog OS=Mus musculus OX=10090 GN=Thoc6 PE=1 SV=1 0 4 4 0.6388 0 1 1 1 402.69632 1607.76345 1607.76584 -1.49 -0.0006 0/0 0 0 158981.6719 HCD 30 MS2 24.46988 6.9 110 23.3011 3506 3506 3503 QEplus033719.raw F4 16.3 4.3 6.2 7.8 6.8 69 2.99 1 FALSE 1.14E-05 2.10E-05 0.986 -250 321 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNSDDRDNERER [R].gNSDDRDNERER.[E] N-Term(TMT6plex) 4 Q3URU2 Paternally-expressed gene 3 protein OS=Mus musculus OX=10090 GN=Peg3 PE=1 SV=1 Q3URU2; A0A5F8MPW9; Q0P5Y8; Q3URU2-2 Paternally-expressed gene 3 protein OS=Mus musculus OX=10090 GN=Peg3 PE=1 SV=1; Paternally-expressed gene 3 protein OS=Mus musculus OX=10090 GN=Peg3 PE=1 SV=1; Peg3 protein OS=Mus musculus OX=10090 GN=Peg3 PE=2 SV=1; Isoform 2 of Paternally-expressed gene 3 protein OS=Mus musculus OX=10090 GN=Peg3 2 4 4 0.4762 0 1 1 1 423.70221 1691.78701 1691.78947 -1.45 -0.00061 0/0 0 0 74191.80469 HCD 30 MS2 52.2643 6.2 110 23.3238 3512 3512 3510 QEplus033719.raw F4 10.8 4.6 6.7 5.5 4.3 5 62 1.68 1 FALSE 5.44E-05 0.001968 0.6 -250 333 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHERPR [K].eHERPR.[R] N-Term(TMT6plex) 2 Q9JJ28 Protein flightless-1 homolog OS=Mus musculus OX=10090 GN=Flii PE=1 SV=1 Q3TUY1; Q9JJ28 Gelsolin-like domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Flii PE=2 SV=1; Protein flightless-1 homolog OS=Mus musculus OX=10090 GN=Flii PE=1 SV=1 0 3 3 0.2881 0 1 1 1 351.53107 1052.57865 1052.57986 -1.15 -0.0004 0/0 0 0 153746.4688 HCD 30 MS2 42.8407 16.5 110 23.3446 3517 3517 3515 QEplus033719.raw F4 48 6.7 11.5 7.8 11.1 13.6 173 1.77 1 FALSE 0.001473 0.02134 0.27 -250 365 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDERPHRR [R].dDERPHRR.[D] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.2275 0 1 1 1 437.23514 1309.69086 1309.69226 -1.07 -0.00047 0/0 0 0 236739.9063 HCD 30 MS2 31.35793 9 110 23.3901 3529 3529 3527 QEplus033719.raw F4 15.6 4.3 10.7 7 10.8 5.4 227 1.67 1 FALSE 0.006252 0.1012 0.003 -250 389 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARREEEENR [R].aRREEEENR.[R] N-Term(TMT6plex) 11 K3W4R7 "Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1" K3W4R7; J3QQ13; A0A087WRX3; Q3TQ90; P50752; P50752-3; Q3TH80; P50752-2; P50752-4; K3W4R6; Q6P3Z7 "Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Troponin T, cardiac muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tnnt2 PE=2 SV=1; Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=2; Isoform A2 of Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tnnt2 PE=2 SV=1; Isoform A3B of Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2; Isoform A1 of Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2; Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Tnnt2 protein OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1" 2 4 4 0.4183 0 1 1 1 355.18854 1417.73232 1417.73452 -1.55 -0.00055 0/0 0 0 936802.125 HCD 30 MS2 13.1588 27.8 110 23.4354 3541 3541 3540 QEplus033719.raw F4 61.7 6.8 34 21.5 8.3 34.2 234 2.63 1 FALSE 5.44E-05 0.002324 0.584 -250 419 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REEEENRR [R].rEEEENRR.[K] N-Term(TMT6plex) 11 K3W4R7 "Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1" K3W4R7; J3QQ13; A0A087WRX3; Q3TQ90; P50752; P50752-3; Q3TH80; P50752-2; P50752-4; K3W4R6; Q6P3Z7 "Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Troponin T, cardiac muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tnnt2 PE=2 SV=1; Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=2; Isoform A2 of Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tnnt2 PE=2 SV=1; Isoform A3B of Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2; Isoform A1 of Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2; Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Tnnt2 protein OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1" 2 3 3 0.3933 0 1 1 1 449.5701 1346.69574 1346.69741 -1.23 -0.00055 0/0 0 0 292378.4688 HCD 30 MS2 0 15 110 23.475 3553 3553 3552 QEplus033719.raw F4 41.3 5.3 13.6 7.2 6.7 15.8 205 3 1 FALSE 5.44E-05 0.002388 0.581 -250 425 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARREEEENR [R].aRREEEENR.[R] N-Term(TMT6plex) 11 K3W4R7 "Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1" K3W4R7; J3QQ13; A0A087WRX3; Q3TQ90; P50752; P50752-3; Q3TH80; P50752-2; P50752-4; K3W4R6; Q6P3Z7 "Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Troponin T, cardiac muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tnnt2 PE=2 SV=1; Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=2; Isoform A2 of Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tnnt2 PE=2 SV=1; Isoform A3B of Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2; Isoform A1 of Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2; Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Tnnt2 protein OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1" 2 2 2 0.3475 0 1 1 1 709.37018 1417.73308 1417.73452 -1.02 -0.00072 0/0 0 0 73081.5625 HCD 30 MS2 0 0.7 110 23.4824 3555 3555 3554 QEplus033719.raw F4 2.1 2.3 232 1.41 1 FALSE 0.008495 0.1491 -0.086 -250 440 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNPTSHR [R].rNPTSHR.[A] N-Term(TMT6plex) 4 Q4KL69 Lsm14b protein OS=Mus musculus OX=10090 GN=Lsm14b PE=2 SV=1 Q4KL69; Q8CGC4; Q8BM41; Q3TS70 Lsm14b protein OS=Mus musculus OX=10090 GN=Lsm14b PE=2 SV=1; Protein LSM14 homolog B OS=Mus musculus OX=10090 GN=Lsm14b PE=1 SV=3; Protein LSM14 homolog B OS=Mus musculus OX=10090 GN=Lsm14b PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lsm14b PE=2 SV=1 1 3 3 0.1278 0 1 1 1 366.21057 1096.61716 1096.6173 -0.13 -0.00005 0/0 0 0 61324.97266 HCD 30 MS2 68.75558 9.3 110 23.505 3561 3561 3560 QEplus033719.raw F4 18.6 6.6 9 6.3 8.4 6.7 97 1.33 1 FALSE 0.004271 0.07833 0.066 -250 472 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERTENREEGR [K].eRTENREEGR.[F] N-Term(TMT6plex) 1 Q148W8 Serine/threonine/tyrosine-interacting-like protein 2 OS=Mus musculus OX=10090 GN=Styxl2 PE=1 SV=1 Q148W8 Serine/threonine/tyrosine-interacting-like protein 2 OS=Mus musculus OX=10090 GN=Styxl2 PE=1 SV=1 2 3 3 0.4151 0 1 1 1 502.26013 1504.76584 1504.76655 -0.47 -0.00024 0/0 0 0 174627.25 HCD 30 MS2 34.25755 5.9 110 23.5602 3575 3575 3573 QEplus033719.raw F4 13 5.7 8.1 8.5 206 1.59 1 FALSE 0.005733 0.09597 0.018 -250 478 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRDRDPDHSQDR [R].dRDRDPDHSQDR.[E] N-Term(TMT6plex) 2 Q91W92 Cdc42 effector protein 1 OS=Mus musculus OX=10090 GN=Cdc42ep1 PE=1 SV=1 Q91W92; A0A0R4J0S1 Cdc42 effector protein 1 OS=Mus musculus OX=10090 GN=Cdc42ep1 PE=1 SV=1; Cdc42 effector protein 1 OS=Mus musculus OX=10090 GN=Cdc42ep1 PE=1 SV=1 2 3 3 0.5793 0 1 1 1 580.94476 1740.81974 1740.8211 -0.78 -0.00046 0/0 0 0 109810.2969 HCD 30 MS2 0 110 23.5627 3576 3576 3573 QEplus033719.raw F4 70 1.64 1 FALSE 0.009634 0.1841 -0.121 -250 488 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERTENREEGR [K].eRTENREEGR.[F] N-Term(TMT6plex) 1 Q148W8 Serine/threonine/tyrosine-interacting-like protein 2 OS=Mus musculus OX=10090 GN=Styxl2 PE=1 SV=1 Q148W8 Serine/threonine/tyrosine-interacting-like protein 2 OS=Mus musculus OX=10090 GN=Styxl2 PE=1 SV=1 2 4 4 0.5607 0 1 1 1 376.94669 1504.76491 1504.76655 -1.09 -0.00041 0/0 0 0 445508.2813 HCD 30 MS2 19.57874 35.5 110 23.583 3581 3581 3580 QEplus033719.raw F4 68.2 17 27.3 38.2 17.2 45.4 192 2.39 1 FALSE 0.001177 0.01595 0.321 -250 496 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRDRDPDHSQDR [R].dRDRDPDHSQDR.[E] N-Term(TMT6plex) 2 Q91W92 Cdc42 effector protein 1 OS=Mus musculus OX=10090 GN=Cdc42ep1 PE=1 SV=1 Q91W92; A0A0R4J0S1 Cdc42 effector protein 1 OS=Mus musculus OX=10090 GN=Cdc42ep1 PE=1 SV=1; Cdc42 effector protein 1 OS=Mus musculus OX=10090 GN=Cdc42ep1 PE=1 SV=1 2 4 4 0.7767 0 1 1 1 435.96045 1740.81997 1740.8211 -0.65 -0.00028 0/0 0 0 544395 HCD 30 MS2 19.9567 15 110 23.6057 3587 3587 3586 QEplus033719.raw F4 22.2 9.6 15.3 11.9 18.5 12.4 70 3.18 1 FALSE 1.14E-05 1.26E-06 1.219 -250 532 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STDHGPQNHR [R].sTDHGPQNHR.[A] N-Term(TMT6plex) 2 Q8K009 Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=2 D3Z6B9; Q8K009 Formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=1; Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=2 0 3 3 0.8333 0 1 1 1 459.89868 1377.68149 1377.68209 -0.43 -0.0002 0/0 0 0 96554.57031 HCD 30 MS2 36.34532 9.6 110 23.6434 3598 3598 3593 QEplus033719.raw F4 27.7 6.9 6.7 5.1 6.2 4.9 128 2.94 1 FALSE 1.14E-05 3.13E-06 1.143 -250 544 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHREPSEQEHR [R].qHREPSEQEHR.[R] N-Term(TMT6plex) 1 Q8BIZ6 Smad nuclear-interacting protein 1 OS=Mus musculus OX=10090 GN=Snip1 PE=1 SV=1 Q8BIZ6 Smad nuclear-interacting protein 1 OS=Mus musculus OX=10090 GN=Snip1 PE=1 SV=1 1 4 4 0.526 0 1 1 1 416.21323 1661.83108 1661.83054 0.32 0.00013 0/0 0 0 174588.5938 HCD 30 MS2 36.28629 7.3 110 23.6637 3603 3603 3602 QEplus033719.raw F4 7 5 7.7 6.3 10.1 7.8 144 3.27 1 FALSE 3.35E-05 0.001333 0.636 -250 587 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGPGREESR [R].rGPGREESR.[E] N-Term(TMT6plex) 2 E9PWE8 Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 E9PWE8; Q71H74 Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Collapsin response mediator protein 4A (Fragment) OS=Mus musculus OX=10090 GN=Dpysl3 PE=2 SV=1 2 3 3 0.3871 0 1 1 1 424.90344 1272.69577 1272.69701 -0.97 -0.00041 0/0 0 0 167776.7031 HCD 30 MS2 41.74275 12.4 110 23.7196 3618 3618 3617 QEplus033719.raw F4 21.4 5.4 12.9 11.2 13.5 9.9 288 1.24 1 FALSE 0.00986 0.1935 -0.128 -250 640 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIRHER [K].dIRHER.[D] N-Term(TMT6plex) 2 B2RQL1 4932413O14Rik protein OS=Mus musculus OX=10090 GN=Ccdc158 PE=2 SV=1 B2RQL1; Q8CDI6 4932413O14Rik protein OS=Mus musculus OX=10090 GN=Ccdc158 PE=2 SV=1; Coiled-coil domain-containing protein 158 OS=Mus musculus OX=10090 GN=Ccdc158 PE=2 SV=1 1 3 3 0.1285 0 1 1 1 352.20285 1054.594 1054.59551 -1.43 -0.0005 0/0 0 0 291710.7813 HCD 30 MS2 56.89448 44.4 110 23.7548 3629 3629 3626 QEplus033719.raw F4 157 18.5 22.7 15 33.7 19.3 200 1.79 1 FALSE 0.00673 0.1067 -0.011 -250 686 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQQQQQQQQQQHQQSNR [K].qQQQQQQQQQQHQQSNR.[A] N-Term(TMT6plex) 4 G3UWR2 GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1 G3UWR2; Q6Y7W8-2; G3UYG6; Q6Y7W8 GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; Isoform 2 of GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2; GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=2 0 3 3 0.8622 0 1 1 1 803.06354 2407.17606 2407.17726 -0.5 -0.0004 0/0 0 0 110573.2734 HCD 30 MS2 0 0.7 110 23.7875 3639 3639 3637 QEplus033719.raw F4 1.9 2.2 167 3.41 1 FALSE 1.14E-05 1.46E-07 1.396 -250 708 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RCPADCHHR [K].rcPADcHHR.[G] N-Term(TMT6plex); C2(Carbamidomethyl); C6(Carbamidomethyl) 8 Q80YX1 Tenascin OS=Mus musculus OX=10090 GN=Tnc PE=1 SV=1 Q80YX1-4; Q80YX1; Q148T4; Q148T5; Q80YX1-2; Q80YX1-3; Q80YX1-5; Q80YX0 Isoform 4 of Tenascin OS=Mus musculus OX=10090 GN=Tnc; Tenascin OS=Mus musculus OX=10090 GN=Tnc PE=1 SV=1; Tnc protein OS=Mus musculus OX=10090 GN=Tnc PE=2 SV=1; Tnc protein OS=Mus musculus OX=10090 GN=Tnc PE=2 SV=1; Isoform 2 of Tenascin OS=Mus musculus OX=10090 GN=Tnc; Isoform 3 of Tenascin OS=Mus musculus OX=10090 GN=Tnc; Isoform 5 of Tenascin OS=Mus musculus OX=10090 GN=Tnc; Tenascin OS=Mus musculus OX=10090 GN=Tnc PE=1 SV=1 1 3 3 0.676 0 1 1 1 479.89783 1437.67893 1437.67894 -0.01 0 0/0 0 0 149169.5 HCD 30 MS2 0 8.8 110 23.7975 3643 3643 3637 QEplus033719.raw F4 12.4 5 6.4 5.6 16.4 7.1 59 2.87 1 FALSE 1.14E-05 9.57E-06 1.051 -250 739 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQQQQQQQQQQHQQSNR [K].qQQQQQQQQQQHQQSNR.[A] N-Term(TMT6plex) 4 G3UWR2 GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1 G3UWR2; Q6Y7W8-2; G3UYG6; Q6Y7W8 GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; Isoform 2 of GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2; GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=2 0 4 4 0.6075 0 1 1 1 602.54907 2407.17446 2407.17726 -1.16 -0.0007 0/0 0 0 94701.27344 HCD 30 MS2 0 110 23.8252 3651 3651 3647 QEplus033719.raw F4 162 1.07 1 FALSE 0.00574 0.09618 0.017 -250 755 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RHMDSTDRR [K].rHMDSTDRR.[F] N-Term(TMT6plex) 4 Q6Y5D8 Rho GTPase-activating protein 10 OS=Mus musculus OX=10090 GN=Arhgap10 PE=1 SV=2 Q6Y5D8; Q6Y5D8-4; Q6Y5D8-3; Q6Y5D8-2 Rho GTPase-activating protein 10 OS=Mus musculus OX=10090 GN=Arhgap10 PE=1 SV=2; Isoform 4 of Rho GTPase-activating protein 10 OS=Mus musculus OX=10090 GN=Arhgap10; Isoform 3 of Rho GTPase-activating protein 10 OS=Mus musculus OX=10090 GN=Arhgap10; Isoform 2 of Rho GTPase-activating protein 10 OS=Mus musculus OX=10090 GN=Arhgap10 2 3 3 0.038 0 1 1 1 468.24374 1402.71668 1402.7171 -0.3 -0.00014 0/0 0 0 111261.7422 HCD 30 MS2 22.7362 8.6 110 23.8479 3657 3657 3656 QEplus033719.raw F4 11 6.9 7.4 8.1 11.7 6.7 124 1.84 1 FALSE 0.008059 0.1344 -0.066 -250 774 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRDPDHSQDR [R].dRDPDHSQDR.[E] N-Term(TMT6plex) 2 Q91W92 Cdc42 effector protein 1 OS=Mus musculus OX=10090 GN=Cdc42ep1 PE=1 SV=1 Q91W92; A0A0R4J0S1 Cdc42 effector protein 1 OS=Mus musculus OX=10090 GN=Cdc42ep1 PE=1 SV=1; Cdc42 effector protein 1 OS=Mus musculus OX=10090 GN=Cdc42ep1 PE=1 SV=1 1 3 3 0.5521 0 1 1 1 490.5686 1469.69126 1469.69305 -1.22 -0.0006 0/0 0 0 120317.5625 HCD 30 MS2 19.1215 6 110 23.8554 3660 3660 3656 QEplus033719.raw F4 9.8 4 6.8 4.2 5.3 5.8 52 1.92 1 FALSE 0.004014 0.07401 0.077 -250 787 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTAGDHPGR [K].rTAGDHPGR.[A] N-Term(TMT6plex) 2 P47856 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Mus musculus OX=10090 GN=Gfpt1 PE=1 SV=3 P47856; P47856-2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Mus musculus OX=10090 GN=Gfpt1 PE=1 SV=3; Isoform 2 of Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Mus musculus OX=10090 GN=Gfpt1 1 3 3 0.5083 0 1 1 1 399.22064 1195.64737 1195.64933 -1.64 -0.00065 0/0 0 0 615189.875 HCD 30 MS2 18.81771 24.3 110 23.8756 3665 3665 3664 QEplus033719.raw F4 71.8 11.2 17.6 15.6 10.8 18.5 220 3.62 1 FALSE 1.14E-05 9.36E-08 1.433 -250 790 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RHMDSTDRR [K].rHMDSTDRR.[F] N-Term(TMT6plex) 4 Q6Y5D8 Rho GTPase-activating protein 10 OS=Mus musculus OX=10090 GN=Arhgap10 PE=1 SV=2 Q6Y5D8; Q6Y5D8-4; Q6Y5D8-3; Q6Y5D8-2 Rho GTPase-activating protein 10 OS=Mus musculus OX=10090 GN=Arhgap10 PE=1 SV=2; Isoform 4 of Rho GTPase-activating protein 10 OS=Mus musculus OX=10090 GN=Arhgap10; Isoform 3 of Rho GTPase-activating protein 10 OS=Mus musculus OX=10090 GN=Arhgap10; Isoform 2 of Rho GTPase-activating protein 10 OS=Mus musculus OX=10090 GN=Arhgap10 2 4 4 0.3964 0 1 1 1 351.43427 1402.71523 1402.7171 -1.33 -0.00047 0/0 0 0 504842.9688 HCD 30 MS2 18.1507 34.9 110 23.8781 3666 3666 3664 QEplus033719.raw F4 53.6 30.4 29.6 28.8 52.4 14.6 125 2.8 1 FALSE 1.14E-05 0.0007707 0.685 -250 798 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDERPHRRDEDR [R].dDERPHRRDEDR.[L] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 2 4 4 0.2604 0 1 1 1 456.97693 1824.88588 1824.88985 -2.17 -0.00099 0/0 0 0 159806.4844 HCD 30 MS2 16.54406 5.6 110 23.8806 3667 3667 3664 QEplus033719.raw F4 8.2 6.1 5.8 3.5 5.7 4.4 132 1.69 1 FALSE 0.009619 0.1831 -0.12 -250 806 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRDPDHSQDR [R].dRDPDHSQDR.[E] N-Term(TMT6plex) 2 Q91W92 Cdc42 effector protein 1 OS=Mus musculus OX=10090 GN=Cdc42ep1 PE=1 SV=1 Q91W92; A0A0R4J0S1 Cdc42 effector protein 1 OS=Mus musculus OX=10090 GN=Cdc42ep1 PE=1 SV=1; Cdc42 effector protein 1 OS=Mus musculus OX=10090 GN=Cdc42ep1 PE=1 SV=1 1 4 4 0.6736 0 1 1 1 368.17825 1469.69118 1469.69305 -1.27 -0.00047 0/0 0 0 289007.6563 HCD 30 MS2 32.89255 13.5 110 23.883 3668 3668 3664 QEplus033719.raw F4 20.1 8.6 15.3 10.4 15 11.3 52 2.39 1 FALSE 0.000262 0.005323 0.494 -250 814 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQQQEDRER [R].qQQQEDRER.[L] N-Term(TMT6plex) 4 Q99K41 EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1 Q3UUU0; Q99K41; Q3U254; Q3USG5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; C1q domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1 1 3 3 0.625 0 1 1 1 482.58112 1445.72879 1445.72943 -0.44 -0.00021 0/0 0 0 227701.6094 HCD 30 MS2 12.04037 13.6 110 23.9057 3674 3674 3673 QEplus033719.raw F4 28.1 11.2 17.6 8 4.1 12.6 139 2.4 1 FALSE 1.14E-05 0.0001172 0.844 -250 822 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHVTHHPR [K].aHVTHHPR.[SA] N-Term(TMT6plex) 47 Q95457 MHC class I heavy chain OS=Mus musculus OX=10090 GN=H2-D1 PE=2 SV=1 Q95457; A0A286R3P2; Q3KQJ3; E9PWT4; P79568; Q61892; O19453; Q31153; O19467; A0A2Z4SZR0; A0A218PH06; E9PX63; Q31170; O19476; Q9TQB1; Q66JR0; Q569W0; Q31168; W5XQG0; P01897; Q5KTQ1; K7X379; Q31218; P06339; A7VMS5; O19441; O98032; Q31169; Q1XIR8; Q61894; P14429; Q31215; P79569; P14426; O78207; A0A482D1Q0; P14430; P01899; G3UZP7; Q8R3Y0; Q31149; P79567; E9QJR9; Q31167; Q52PG7; Q31172; P14427 "MHC class I heavy chain OS=Mus musculus OX=10090 GN=H2-D1 PE=2 SV=1; MHC class I antigen (Fragment) OS=Mus musculus OX=10090 GN=H2 PE=2 SV=1; H2-D1 protein (Fragment) OS=Mus musculus OX=10090 GN=H2-D1 PE=2 SV=1; H-2 class I histocompatibility antigen, Q7 alpha chain OS=Mus musculus OX=10090 GN=H2-Q7 PE=3 SV=2; Class Ib MHC antigen Qa-2 OS=Mus musculus OX=10090 GN=H2-Q6 PE=1 SV=1; mRNA OS=Mus musculus OX=10090 GN=H2-D1 PE=2 SV=1; Cell surface glycoprotein (Fragment) OS=Mus musculus OX=10090 GN=L(w16) PE=3 SV=1; H2-T23 protein OS=Mus musculus OX=10090 GN=H2-T23 PE=1 SV=1; Class I MHC H2-D-beta transplantation antigen mRNA (b haplotype), 3' end (Fragment) OS=Mus musculus OX=10090 GN=H2-D1 PE=2 SV=1; MHC class II antigen K (Fragment) OS=Mus musculus OX=10090 GN=H2-K1 PE=4 SV=1; Histocompatibility 2, D region locus L OS=Mus musculus OX=10090 GN=H-2D PE=2 SV=1; Histocompatibility 2, Q region locus 1 OS=Mus musculus OX=10090 GN=H2-Q1 PE=3 SV=1; MHC H-2Dr protein OS=Mus musculus OX=10090 GN=MHC H-2Dr PE=2 SV=1; MHC class I H-2Dp (Fragment) OS=Mus musculus OX=10090 GN=H2-D1 PE=2 SV=1; MHC class Ib antigen Qa-1d OS=Mus musculus OX=10090 GN=H2-T23 PE=2 SV=2; H2-Q1 protein OS=Mus musculus OX=10090 GN=H2-Q1 PE=2 SV=1; H2-D1 protein (Fragment) OS=Mus musculus OX=10090 GN=H2-D1 PE=2 SV=1; H-2D cell surface glycoprotein (Fragment) OS=Mus musculus OX=10090 GN=H2-D1 PE=2 SV=1; MHC class I antigen OS=Mus musculus OX=10090 GN=H2-D1 PE=2 SV=1; H-2 class I histocompatibility antigen, L-D alpha chain OS=Mus musculus OX=10090 GN=H2-L PE=1 SV=2; MHC class I heavy chain H2-K OS=Mus musculus OX=10090 GN=H2-K PE=3 SV=1; MHC class I antigen (Fragment) OS=Mus musculus OX=10090 GN=H2-L PE=2 SV=1; Class I (Qa) Q2k antigen OS=Mus musculus OX=10090 GN=MHC Q2-k PE=3 SV=1; H-2 class I histocompatibility antigen, D-37 alpha chain OS=Mus musculus OX=10090 GN=H2-T23 PE=1 SV=1; MHC classIb Qa1 OS=Mus musculus OX=10090 GN=H2-T23 PE=2 SV=1; Histocompatibility 2, Q region locus 1 OS=Mus musculus OX=10090 GN=H2-Q1 PE=2 SV=1; MHC class Ib antigen Qa-1c OS=Mus musculus OX=10090 GN=H2-T23 PE=2 SV=1; MHC H-2Dr protein OS=Mus musculus OX=10090 GN=H2-D1 PE=2 SV=1; MHC class I heavy chain H2-K (Fragment) OS=Mus musculus OX=10090 GN=H2-K PE=4 SV=1; mRNA OS=Mus musculus OX=10090 GN=H2-K1 PE=2 SV=1; H-2 class I histocompatibility antigen, Q7 alpha chain OS=Mus musculus OX=10090 GN=H2-Q7 PE=1 SV=1; Class I (Qa) Q1-k antigen OS=Mus musculus OX=10090 GN=MHC Q1-k PE=3 SV=1; Class Ib MHC antigen Qa-2 (Fragment) OS=Mus musculus OX=10090 GN=Q9 PE=4 SV=1; H-2 class I histocompatibility antigen, D-K alpha chain OS=Mus musculus OX=10090 GN=H2-D1 PE=1 SV=1; H-2D cell surface glycoprotein (Fragment) OS=Mus musculus OX=10090 GN=H2-D1 PE=2 SV=1; MHC class I heavy chain heavy chain (Fragment) OS=Mus musculus OX=10090 GN=H2-D1 PE=2 SV=1; H-2 class I histocompatibility antigen, Q8 alpha chain OS=Mus musculus OX=10090 GN=H2-Q8 PE=3 SV=1; H-2 class I histocompatibility antigen, D-B alpha chain OS=Mus musculus OX=10090 GN=H2-D1 PE=1 SV=2; H-2 class I histocompatibility antigen, D-K alpha chain OS=Mus musculus OX=10090 GN=H2-D1 PE=1 SV=2; H2-D1 protein (Fragment) OS=Mus musculus OX=10090 GN=H2-D1 PE=2 SV=1; MHC class I-alpha OS=Mus musculus OX=10090 GN=H2-D1 PE=2 SV=1; Class Ib MHC antigen Qa-2 OS=Mus musculus OX=10090 GN=H2-Q8 PE=3 SV=1; H-2 class I histocompatibility antigen, Q7 alpha chain OS=Mus musculus OX=10090 GN=H2-Q7 PE=3 SV=1; H-2D cell surface glycoprotein (Fragment) OS=Mus musculus OX=10090 GN=H2-D1 PE=1 SV=1; Histocompatibility 2, Q region locus 7 OS=Mus musculus OX=10090 GN=H2-Q9 PE=2 SV=1; MHC class I antigen OS=Mus musculus OX=10090 GN=H2-K1 PE=2 SV=1; H-2 class I histocompatibility antigen, D-P alpha chain OS=Mus musculus OX=10090 GN=H2-D1 PE=1 SV=1" 0 3 3 0.72 0 1 1 1 395.22595 1183.6633 1183.66459 -1.09 -0.00043 0/0 0 0 204935.8594 HCD 30 MS2 11.05621 8.8 110 23.9082 3675 3675 3673 QEplus033719.raw F4 11 7.7 14 8.2 7.9 4.3 227 3.25 1 FALSE 1.14E-05 8.08E-07 1.255 -250 837 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRGGGTHR [R].vRGGGTHR.[S] N-Term(TMT6plex) 1 Q9D8E6 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3 Q9D8E6 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3 1 3 3 0.4937 0 1 1 1 356.87866 1068.62143 1068.62239 -0.9 -0.00032 0/0 0 0 2141540 HCD 30 MS2 8.89716 124.6 110 23.9309 3681 3681 3680 QEplus033719.raw F4 452.5 42.9 70.6 31.7 64.2 85.9 91 3.18 1 FALSE 1.14E-05 0.0002567 0.779 -250 868 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRQEEEARR [R].qRQEEEARR.[A] N-Term(TMT6plex) 7 O35226; O35226-2 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4 PE=1 SV=1;Isoform Rpn10B of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4 O35226-3; O35226; F7AI87; O35226-4; O35226-2; O35226-5; Q9CY29 Isoform Rpn10C of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4; 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 4 (Fragment) OS=Mus musculus OX=10090 GN=Psmd4 PE=1 SV=1; Isoform Rpn10D of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4; Isoform Rpn10B of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4; Isoform Rpn10E of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4; 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4 PE=2 SV=1 2 3 3 0.4208 0 1 1 1 477.59213 1430.76184 1430.76615 -3.01 -0.00144 0/0 0 0 1014724.563 HCD 30 MS2 17.29677 59.3 110 23.9786 3693 3693 3692 QEplus033719.raw F4 99.9 32.7 66.3 62.1 47.7 47.3 268 3.66 2 FALSE 1.14E-05 0.0001287 0.836 -250 876 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRGDTEASGR [R].gRGDTEASGR.[V] N-Term(TMT6plex) 4 Q0GNC1 Inverted formin-2 OS=Mus musculus OX=10090 GN=Inf2 PE=1 SV=1 Q0GNC1; E9QLA5; Q0GNC1-3; A0A1Y7VM80 Inverted formin-2 OS=Mus musculus OX=10090 GN=Inf2 PE=1 SV=1; Inverted formin-2 OS=Mus musculus OX=10090 GN=Inf2 PE=1 SV=1; Isoform 2 of Inverted formin-2 OS=Mus musculus OX=10090 GN=Inf2; Inverted formin-2 (Fragment) OS=Mus musculus OX=10090 GN=Inf2 PE=1 SV=1 1 3 3 0.465 0 1 1 1 412.21637 1234.63456 1234.63374 0.66 0.00027 0/0 0 0 130242.6563 HCD 30 MS2 42.07421 8.4 110 23.9811 3694 3694 3692 QEplus033719.raw F4 15.4 7.2 10.3 4.7 7.9 4.9 178 2 1 FALSE 5.44E-05 0.002483 0.577 -250 889 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATHQDSRPASR [R].aTHQDSRPASR.[R] N-Term(TMT6plex) 1 Q91YU8 Suppressor of SWI4 1 homolog OS=Mus musculus OX=10090 GN=Ppan PE=1 SV=2 Q91YU8 Suppressor of SWI4 1 homolog OS=Mus musculus OX=10090 GN=Ppan PE=1 SV=2 0 4 4 0.5307 0 1 1 1 364.44641 1454.76381 1454.76615 -1.61 -0.00058 0/0 0 0 478942.5625 HCD 30 MS2 66.99825 44.6 110 24.0013 3699 3699 3697 QEplus033719.raw F4 98.6 25.5 42.6 30.9 32.7 37.6 238 3.09 1 FALSE 1.14E-05 7.29E-05 0.883 -250 895 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATHQDSRPASR [R].aTHQDSRPASR.[R] N-Term(TMT6plex) 1 Q91YU8 Suppressor of SWI4 1 homolog OS=Mus musculus OX=10090 GN=Ppan PE=1 SV=2 Q91YU8 Suppressor of SWI4 1 homolog OS=Mus musculus OX=10090 GN=Ppan PE=1 SV=2 0 3 3 0.5742 0 1 1 1 485.59314 1454.76487 1454.76615 -0.89 -0.00043 0/0 0 0 160599.0156 HCD 30 MS2 42.17384 8 110 24.0038 3700 3700 3697 QEplus033719.raw F4 15.6 7.9 6.6 6.2 5.7 6 229 1.55 1 FALSE 0.0003996 0.007079 0.456 -250 917 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRQEEEARR [R].qRQEEEARR.[A] N-Term(TMT6plex) 7 O35226; O35226-2 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4 PE=1 SV=1;Isoform Rpn10B of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4 O35226-3; O35226; F7AI87; O35226-4; O35226-2; O35226-5; Q9CY29 Isoform Rpn10C of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4; 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 4 (Fragment) OS=Mus musculus OX=10090 GN=Psmd4 PE=1 SV=1; Isoform Rpn10D of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4; Isoform Rpn10B of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4; Isoform Rpn10E of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4; 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4 PE=2 SV=1 2 4 4 0.3897 0 1 1 1 358.44641 1430.76381 1430.76615 -1.63 -0.00058 0/0 0 0 3599939.25 HCD 30 MS2 14.19948 158.1 110 24.0289 3707 3707 3706 QEplus033719.raw F4 280.1 88.1 161.8 187.2 101.3 130.1 269 2.9 2 FALSE 1.14E-05 4.02E-05 0.932 -250 923 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRAEAER [R].qRAEAER.[V] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.2673 0 1 1 1 363.5379 1088.59916 1088.60099 -1.68 -0.00061 0/0 0 0 755562.375 HCD 30 MS2 36.61672 114.7 110 24.0314 3708 3708 3706 QEplus033719.raw F4 300.3 54.7 99.1 63.2 70.5 100.5 322 2.02 2 FALSE 0.001728 0.02902 0.221 -250 964 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREEEERER [R].qREEEERER.[L] N-Term(TMT6plex) 4 Q3TJW1 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Acbd3 PE=2 SV=1 Q3TJW1; Q8BMP6; A0A0R4J079; Q6P9T6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Acbd3 PE=2 SV=1; Golgi resident protein GCP60 OS=Mus musculus OX=10090 GN=Acbd3 PE=1 SV=3; Golgi resident protein GCP60 OS=Mus musculus OX=10090 GN=Acbd3 PE=1 SV=1; Acyl-Coenzyme A binding domain containing 3 OS=Mus musculus OX=10090 GN=Acbd3 PE=2 SV=1 2 3 3 0.371 0 1 1 1 497.25607 1489.75367 1489.75565 -1.33 -0.00066 0/0 0 0 63450.16797 HCD 30 MS2 0 7.3 110 24.0439 3713 3713 3706 QEplus033719.raw F4 11.5 6.1 6.8 6.1 6.6 6.8 168 1.86 1 FALSE 0.009619 0.183 -0.12 -250 993 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGDDRRPR [R].dGDDRRPR.[L] N-Term(TMT6plex) 2 Q8BG17 Nucleolar protein 12 OS=Mus musculus OX=10090 GN=Nol12 PE=1 SV=1 Q8BG17; F8WGP0 Nucleolar protein 12 OS=Mus musculus OX=10090 GN=Nol12 PE=1 SV=1; Nucleolar protein 12 (Fragment) OS=Mus musculus OX=10090 GN=Nol12 PE=1 SV=1 1 3 3 0.4464 0 1 1 1 405.88443 1215.63874 1215.63916 -0.35 -0.00014 0/0 0 0 177928.8594 HCD 30 MS2 58.82357 20.9 110 24.0741 3722 3722 3718 QEplus033719.raw F4 40.3 19.4 23.5 13.8 10.3 18 173 1.68 1 FALSE 0.007997 0.1329 -0.064 -250 1050 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRPPASHEGER [R].rRPPASHEGER.[K] N-Term(TMT6plex) 3 Q5DTJ4 MKIAA4178 protein (Fragment) OS=Mus musculus OX=10090 GN=Prrc2a PE=2 SV=1 G3UX48; Q5DTJ4; Q7TSC1 Protein PRRC2A OS=Mus musculus OX=10090 GN=Prrc2a PE=1 SV=1; MKIAA4178 protein (Fragment) OS=Mus musculus OX=10090 GN=Prrc2a PE=2 SV=1; Protein PRRC2A OS=Mus musculus OX=10090 GN=Prrc2a PE=1 SV=1 1 4 4 0.6148 0 1 1 1 380.9613 1520.82338 1520.82434 -0.63 -0.00024 0/0 0 0 105916.9531 HCD 30 MS2 11.71289 8.1 110 24.1116 3734 3734 3727 QEplus033719.raw F4 5.8 6.6 10.9 3.6 13.2 8.6 329 2.57 1 FALSE 5.44E-05 0.001856 0.606 -250 1060 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TRAEEERR [K].tRAEEERR.[E] N-Term(TMT6plex) 4 Q8CGF7 Transcription elongation regulator 1 OS=Mus musculus OX=10090 GN=Tcerg1 PE=1 SV=2 Q8CGF7-3; Q8CGF7-2; A0A494B9W7; Q8CGF7 Isoform 3 of Transcription elongation regulator 1 OS=Mus musculus OX=10090 GN=Tcerg1; Isoform 2 of Transcription elongation regulator 1 OS=Mus musculus OX=10090 GN=Tcerg1; Transcription elongation regulator 1 (Fragment) OS=Mus musculus OX=10090 GN=Tcerg1 PE=1 SV=1; Transcription elongation regulator 1 OS=Mus musculus OX=10090 GN=Tcerg1 PE=1 SV=2 2 3 3 0.08 0 1 1 1 425.90372 1275.6966 1275.69668 -0.06 -0.00003 0/0 0 0 258464.4375 HCD 30 MS2 33.60048 21.9 110 24.1166 3736 3736 3727 QEplus033719.raw F4 52.1 11 26.3 14.3 12.2 15.7 317 1.75 1 FALSE 0.001456 0.02095 0.273 -250 1086 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREEEERER [R].qREEEERER.[L] N-Term(TMT6plex) 4 Q3TJW1 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Acbd3 PE=2 SV=1 Q3TJW1; Q8BMP6; A0A0R4J079; Q6P9T6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Acbd3 PE=2 SV=1; Golgi resident protein GCP60 OS=Mus musculus OX=10090 GN=Acbd3 PE=1 SV=3; Golgi resident protein GCP60 OS=Mus musculus OX=10090 GN=Acbd3 PE=1 SV=1; Acyl-Coenzyme A binding domain containing 3 OS=Mus musculus OX=10090 GN=Acbd3 PE=2 SV=1 2 4 4 0.4433 0 1 1 1 373.19403 1489.75429 1489.75565 -0.91 -0.00034 0/0 0 0 1510050.5 HCD 30 MS2 14.05024 66.2 110 24.1315 3741 3741 3738 QEplus033719.raw F4 107.6 35.4 68.3 74.5 56.2 55.2 169 3 1 FALSE 1.14E-05 0.0005465 0.715 -250 1092 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRDNDETNQQGA [K].rRDNDETNQQGA.[-] N-Term(TMT6plex) 1 Q3TIX9 U4/U6.U5 tri-snRNP-associated protein 2 OS=Mus musculus OX=10090 GN=Usp39 PE=1 SV=2 Q3TIX9 U4/U6.U5 tri-snRNP-associated protein 2 OS=Mus musculus OX=10090 GN=Usp39 PE=1 SV=2 2 3 3 0.7107 0 1 1 1 544.93384 1632.78696 1632.78874 -1.09 -0.00059 0/0 0 0 337568.9688 HCD 30 MS2 9.146535 3.5 110 24.134 3742 3742 3738 QEplus033719.raw F4 9.1 2.4 2.8 2.7 4.2 81 1.97 1 FALSE 0.001506 0.02217 0.264 -250 1098 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRPPASHEGER [R].rRPPASHEGER.[K] N-Term(TMT6plex) 3 Q5DTJ4 MKIAA4178 protein (Fragment) OS=Mus musculus OX=10090 GN=Prrc2a PE=2 SV=1 G3UX48; Q5DTJ4; Q7TSC1 Protein PRRC2A OS=Mus musculus OX=10090 GN=Prrc2a PE=1 SV=1; MKIAA4178 protein (Fragment) OS=Mus musculus OX=10090 GN=Prrc2a PE=2 SV=1; Protein PRRC2A OS=Mus musculus OX=10090 GN=Prrc2a PE=1 SV=1 1 3 3 0.3613 0 1 1 1 507.61319 1520.82502 1520.82434 0.45 0.00023 0/0 0 0 104396 HCD 30 MS2 17.73345 4.3 110 24.1365 3743 3743 3738 QEplus033719.raw F4 5.3 5.2 4.4 2.7 2.4 5.6 366 1.55 1 FALSE 0.006267 0.1015 0.002 -250 1127 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRVVHQNHGER [K].sRVVHQNHGER.[N] N-Term(TMT6plex) 4 Q9WTI7-3 Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c Q9WTI7; Q9WTI7-3; Q9WTI7-2; Q9WTI7-4 Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c PE=1 SV=2; Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Isoform 2 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Isoform 4 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c 1 3 3 0.5794 0 1 1 1 516.61597 1547.83335 1547.83524 -1.22 -0.00063 0/0 0 0 91892.79688 HCD 30 MS2 35.79972 6.2 110 24.1489 3748 3748 3738 QEplus033719.raw F4 6.6 7.5 6.7 6.9 9.5 321 2.33 1 FALSE 0.0008991 0.01243 0.367 -250 1146 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMNTNPSR [K].rmNTNPSR.[G] N-Term(TMT6plex); M2(Oxidation) 10 A0A1B0GS68 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Gm45713 PE=2 SV=1 A0A1B0GS68; A0A1B0GRH1; A0A1B0GTA1; Q3TDS9; A0A1B0GSC2; P19253; A0A1B0GSJ2; A0A1B0GT00; A0A1B0GSQ6; A0A1B0GSB2 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Gm45713 PE=2 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=2 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=4; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1 1 3 3 0.4257 0 1 1 1 407.54944 1220.63376 1220.63672 -2.42 -0.00099 0/0 0 0 220116.7188 HCD 30 MS2 45.10638 18.4 110 24.1662 3753 3753 3751 QEplus033719.raw F4 27.1 10.8 18.2 16.5 15.2 22.5 205 1.48 1 FALSE 0.002535 0.04985 0.143 -250 1176 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HHAEHSVGRPR [R].hHAEHSVGRPR.[Q] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.541 0 1 1 1 504.60831 1511.81037 1511.81411 -2.47 -0.00125 0/0 0 0 170114.5156 HCD 30 MS2 63.19036 15.4 110 24.1811 3759 3759 3751 QEplus033719.raw F4 24.1 9.3 25.4 12.5 6.3 14.8 318 3.05 3 FALSE 1.14E-05 2.58E-05 0.969 -250 1207 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRGPGPAR [R].rRGPGPAR.[T] N-Term(TMT6plex) 1 Q3TA75 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Fxr2 PE=2 SV=1 Q3TA75 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Fxr2 PE=2 SV=1 2 3 3 0.2455 0 1 1 1 365.89423 1095.66812 1095.66967 -1.41 -0.00052 0/0 0 0 124001.4922 HCD 30 MS2 63.56823 15 110 24.2112 3768 3768 3764 QEplus033719.raw F4 21.1 12 17 11.7 13.2 14.8 81 1.1 1 FALSE 0.007623 0.125 -0.051 -250 1234 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAAEERHPQGDR [K].rAAEERHPQGDR.[T] N-Term(TMT6plex) 3 O55187 E3 SUMO-protein ligase CBX4 OS=Mus musculus OX=10090 GN=Cbx4 PE=1 SV=2 O55187; O55187-2; Q3U240 E3 SUMO-protein ligase CBX4 OS=Mus musculus OX=10090 GN=Cbx4 PE=1 SV=2; Isoform 2 of E3 SUMO-protein ligase CBX4 OS=Mus musculus OX=10090 GN=Cbx4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cbx4 PE=2 SV=1 2 4 4 0.1441 0 1 1 1 413.47061 1650.86062 1650.86218 -0.95 -0.00039 0/0 0 0 81884.23438 HCD 30 MS2 64.00556 3.2 110 24.2237 3773 3773 3764 QEplus033719.raw F4 3.6 2.8 4.7 2.3 3.3 2.8 284 1.18 1 FALSE 0.002071 0.03858 0.18 -250 1260 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRQEEEAR [R].qRQEEEAR.[R] N-Term(TMT6plex) 7 O35226; O35226-2 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4 PE=1 SV=1;Isoform Rpn10B of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4 O35226-3; O35226; F7AI87; O35226-4; O35226-2; O35226-5; Q9CY29 Isoform Rpn10C of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4; 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 4 (Fragment) OS=Mus musculus OX=10090 GN=Psmd4 PE=1 SV=1; Isoform Rpn10D of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4; Isoform Rpn10B of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4; Isoform Rpn10E of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4; 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4 PE=2 SV=1 1 3 3 0.4799 0 1 1 1 425.55917 1274.66297 1274.66504 -1.63 -0.00069 0/0 0 0 385256.4063 HCD 30 MS2 13.76084 45.3 110 24.2512 3781 3781 3776 QEplus033719.raw F4 110 18.6 52.7 40.2 13 37 204 2.98 2 FALSE 1.14E-05 0.0005877 0.708 -250 1274 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RESEREEEQR [K].rESEREEEQR.[L] N-Term(TMT6plex) 5 F6W2Q5 Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1 F6W2Q5; P42567-2; P42567; H3BK65; A0A0R4J0A0 Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1; Isoform 2 of Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15; Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1; Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1; Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1 2 3 3 0.3869 0 1 1 1 526.26678 1576.7858 1576.78768 -1.19 -0.00063 0/0 0 0 185213.8594 HCD 30 MS2 42.29465 7.2 110 24.2738 3787 3787 3786 QEplus033719.raw F4 9.6 4.3 6.7 8.9 6 7.5 141 1.99 1 FALSE 0.002233 0.04328 0.163 -250 1285 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RESEREEEQR [K].rESEREEEQR.[L] N-Term(TMT6plex) 5 F6W2Q5 Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1 F6W2Q5; P42567-2; P42567; H3BK65; A0A0R4J0A0 Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1; Isoform 2 of Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15; Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1; Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1; Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1 2 4 4 0.5152 0 1 1 1 394.95181 1576.78542 1576.78768 -1.43 -0.00056 0/0 0 0 424317.4063 HCD 30 MS2 22.54205 16.5 110 24.2788 3789 3789 3786 QEplus033719.raw F4 22.8 10.8 23.8 13.6 15.5 12.3 142 2.64 1 FALSE 0.0001603 0.00369 0.536 -250 1304 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RCTSSNPNQR [K].rcTSSNPNQR.[L] N-Term(TMT6plex); C2(Carbamidomethyl) 1 P10085 Myoblast determination protein 1 OS=Mus musculus OX=10090 GN=Myod1 PE=1 SV=2 P10085 Myoblast determination protein 1 OS=Mus musculus OX=10090 GN=Myod1 PE=1 SV=2 1 3 3 0.5366 0 1 1 1 483.57889 1448.72211 1448.72257 -0.32 -0.00015 0/0 0 0 61178.59766 HCD 30 MS2 37.02356 5.8 110 24.3038 3796 3796 3795 QEplus033719.raw F4 13.7 3.8 6.6 3.3 7.5 157 2.05 1 FALSE 0.001108 0.01458 0.338 -250 1350 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATGQRPHR [R].aTGQRPHR.[F] N-Term(TMT6plex) 4 Q4FJZ4 T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1 Q4FJZ4; Q3UDG2; Q3U6U7; P32921 "T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; Tryptophan--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Wars1 PE=1 SV=2" 0 3 3 0.4638 0 1 1 1 384.55731 1151.65738 1151.6595 -1.84 -0.00071 0/0 0 0 141494.8281 HCD 30 MS2 35.24404 20.2 110 24.3414 3808 3808 3803 QEplus033719.raw F4 37.6 12.5 20.8 15.6 14.9 19.9 209 2.07 1 FALSE 0.0002218 0.004681 0.509 -250 1362 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPAPAHGHH [K].gPAPAHGHH.[-] N-Term(TMT6plex) 1 P56379 "ATP synthase subunit ATP5MJ, mitochondrial OS=Mus musculus OX=10090 GN=Atp5mj PE=1 SV=1" P56379 "ATP synthase subunit ATP5MJ, mitochondrial OS=Mus musculus OX=10090 GN=Atp5mj PE=1 SV=1" 0 3 3 0.8773 0 1 1 1 370.53113 1109.57883 1109.58019 -1.23 -0.00045 0/0 0 0 4956592 HCD 30 MS2 14.58961 107.1 110 24.3665 3815 3815 3814 QEplus033719.raw F4 205 62.4 96.4 81.9 67 129.6 119 4.4 1 FALSE 1.14E-05 3.72E-09 1.699 -250 1410 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTEHNQVANR [R].rTEHNQVANR.[L] N-Term(TMT6plex) 1 Q61029-2 "Isoform Delta of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo" Q61029-2 "Isoform Delta of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo" 1 3 3 0.639 0 1 1 1 485.2652 1453.78104 1453.78214 -0.76 -0.00037 0/0 0 0 197959.6406 HCD 30 MS2 0 6.9 110 24.4015 3826 3826 3825 QEplus033719.raw F4 10.3 4.1 9 9 4.2 5.1 296 2.77 1 FALSE 1.14E-05 0.0001602 0.818 -250 1424 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSRPSDAR [R].gSRPSDAR.[F] N-Term(TMT6plex) 2 D3YXK2 Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=2 D3YXK2; S4R1M2 Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=2; Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=1 0 3 3 0.2083 0 1 1 1 358.86618 1074.58399 1074.58534 -1.25 -0.00045 0/0 0 0 158841.4219 HCD 30 MS2 77.68682 37.3 110 24.4089 3829 3829 3825 QEplus033719.raw F4 50.9 25.4 49.7 29.1 31.9 37 290 1.68 1 FALSE 0.003101 0.06043 0.113 -250 1429 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGPPPRR [KR].rGPPPRR.[AY] N-Term(TMT6plex) 3 Q8C671 Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=2 SV=1 Q9DAE2; Q8C671; Q62093 "RNA-binding motif protein, X-linked-like 2 OS=Mus musculus OX=10090 GN=Rbmxl2 PE=1 SV=1; Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=2 SV=1; Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=1 SV=4" 2 3 3 0.5297 0 1 1 1 355.55902 1064.66251 1064.66386 -1.27 -0.00045 0/0 0 0 353820.125 HCD 30 MS2 51.25916 30 110 24.4114 3830 3830 3825 QEplus033719.raw F4 33.3 26.2 35.9 20 39.4 25.4 94 2.19 1 FALSE 0.005221 0.08913 0.037 -250 1441 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHTGEEAAR [R].sHTGEEAAR.[D] N-Term(TMT6plex) 4 P59108 Copine-2 OS=Mus musculus OX=10090 GN=Cpne2 PE=1 SV=1 P59108; A0A0R4J1D0; Q3TVB2; Q8QZU9 Copine-2 OS=Mus musculus OX=10090 GN=Cpne2 PE=1 SV=1; Copine-2 OS=Mus musculus OX=10090 GN=Cpne2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cpne2 PE=2 SV=1; Cpne2 protein OS=Mus musculus OX=10090 GN=Cpne2 PE=2 SV=1 0 3 3 0.5988 0 1 1 1 396.20468 1186.59949 1186.60138 -1.59 -0.00063 0/0 0 0 297388.375 HCD 30 MS2 40.9532 13.5 110 24.4164 3832 3832 3825 QEplus033719.raw F4 24.5 6.9 14.4 10.3 10.2 14.7 78 3.34 1 FALSE 1.14E-05 0.0001087 0.85 -250 1453 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPAPAHGHH [K].gPAPAHGHH.[-] N-Term(TMT6plex) 1 P56379 "ATP synthase subunit ATP5MJ, mitochondrial OS=Mus musculus OX=10090 GN=Atp5mj PE=1 SV=1" P56379 "ATP synthase subunit ATP5MJ, mitochondrial OS=Mus musculus OX=10090 GN=Atp5mj PE=1 SV=1" 0 2 2 0.8537 0 1 1 1 555.2934 1109.57952 1109.58019 -0.61 -0.00034 0/0 0 0 467353.9375 HCD 30 MS2 0 24.6 110 24.4364 3837 3837 3836 QEplus033719.raw F4 39.1 12.3 27.2 19.3 17.5 32 153 2.87 1 FALSE 1.14E-05 4.10E-06 1.121 -250 1459 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HRQQEMER [K].hRQQEMER.[Q] N-Term(TMT6plex) 3 Q3UZ63 zf-CCCH_3 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Zc3h11a PE=2 SV=1 Q3UZ63; Q3TIV2; Q6NZF1 zf-CCCH_3 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Zc3h11a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zc3h11a PE=2 SV=1; Zinc finger CCCH domain-containing protein 11A OS=Mus musculus OX=10090 GN=Zc3h11a PE=1 SV=1 1 3 3 0.5762 0 1 1 1 448.2334 1342.68564 1342.68473 0.68 0.0003 0/0 0 0 334386.9688 HCD 30 MS2 50.53734 23.3 110 24.4389 3838 3838 3836 QEplus033719.raw F4 32.3 16.6 25.3 16.5 27.9 21.1 147 2.1 1 FALSE 1.14E-05 0.0003032 0.765 -250 1465 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHEGARPMR [K].aHEGARPmR.[A] N-Term(TMT6plex); M8(Oxidation) 5 Q3TF74; Q9WUM3 Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1;Coronin-1B OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1 Q3TF74; Q5PPQ7; Q9WUM4; A0A494B9Y4; Q9WUM3 Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin-1C OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=2; Coronin (Fragment) OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1; Coronin-1B OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1 0 3 3 0.2635 0 1 1 1 423.89392 1269.66721 1269.66835 -0.9 -0.00038 0/0 0 0 165265.0625 HCD 30 MS2 40.55785 13.9 110 24.4439 3840 3840 3836 QEplus033719.raw F4 17.9 8.2 17.6 8.7 18.1 13 217 1.48 2 FALSE 0.004757 0.08349 0.052 -250 1509 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGGSDNASTDCER [K].hGGSDNASTDcER.[T] N-Term(TMT6plex); C11(Carbamidomethyl) 5 Q8BHG1 Nardilysin OS=Mus musculus OX=10090 GN=Nrdc PE=1 SV=1 Q8BHG1; Q3V3G9; Q8R320; A2A9Q2; A6PWC3 "Nardilysin OS=Mus musculus OX=10090 GN=Nrdc PE=1 SV=1; Nardilysin, N-arginine dibasic convertase, NRD convertase 1 (Fragment) OS=Mus musculus OX=10090 GN=Nrd1 PE=1 SV=1; Nardilysin, N-arginine dibasic convertase, NRD convertase 1 OS=Mus musculus OX=10090 GN=Nrd1 PE=2 SV=1; Nardilysin, N-arginine dibasic convertase, NRD convertase 1 OS=Mus musculus OX=10090 GN=Nrd1 PE=1 SV=1; Nardilysin, N-arginine dibasic convertase, NRD convertase 1 OS=Mus musculus OX=10090 GN=Nrd1 PE=1 SV=1" 0 3 3 0.8366 0 1 1 1 545.5722 1634.70206 1634.70263 -0.35 -0.00019 0/0 0 0 230111.2188 HCD 30 MS2 45.22023 8.3 110 24.4713 3850 3850 3847 QEplus033719.raw F4 11.3 6.3 5.4 7.2 13.5 5.9 6 5.08 1 FALSE 1.14E-05 3.01E-10 1.906 -250 1513 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERDGQNSSQSSPR [K].eRDGQNSSQSSPR.[S] N-Term(TMT6plex) 5 D3Z030 F-actin-uncapping protein LRRC16A OS=Mus musculus OX=10090 GN=Carmil1 PE=1 SV=2 Q6EDY6-3; D3Z030; Q9CTA1; Q6EDY6; F7AI27 Isoform 3 of F-actin-uncapping protein LRRC16A OS=Mus musculus OX=10090 GN=Carmil1; F-actin-uncapping protein LRRC16A OS=Mus musculus OX=10090 GN=Carmil1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Carmil1 PE=2 SV=1; F-actin-uncapping protein LRRC16A OS=Mus musculus OX=10090 GN=Carmil1 PE=1 SV=2; F-actin-uncapping protein LRRC16A (Fragment) OS=Mus musculus OX=10090 GN=Carmil1 PE=1 SV=1 1 3 3 0.5854 0 1 1 1 559.60925 1676.81321 1676.81495 -1.04 -0.00058 0/0 0 0 199928.8125 HCD 30 MS2 0 6.7 110 24.4738 3851 3851 3847 QEplus033719.raw F4 8.5 5.1 8 3.3 11.8 3.4 95 3.28 1 FALSE 1.14E-05 4.33E-06 1.116 -250 1535 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRDPSATAR [R].rRDPSATAR.[R] N-Term(TMT6plex) 5 Q3TWI1 Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Lox PE=2 SV=1 Q3TWI1; Q3TX90; P28301; Q3TP83; Q3TLP7 Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Lox PE=2 SV=1; Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Lox PE=2 SV=1; Protein-lysine 6-oxidase OS=Mus musculus OX=10090 GN=Lox PE=1 SV=1; Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Lox PE=2 SV=1; Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Lox PE=2 SV=1 2 3 3 0.5607 0 1 1 1 420.24377 1258.71677 1258.71775 -0.78 -0.00033 0/0 0 0 1569652.75 HCD 30 MS2 13.02426 37.1 110 24.4963 3857 3857 3854 QEplus033719.raw F4 55.5 24.1 33.7 39.8 43.1 26.3 372 2.14 1 FALSE 0.0003996 0.007164 0.455 -250 1545 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEHSEAADQR [K].sEHSEAADQR.[L] N-Term(TMT6plex) 7 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; F6X9B6; Q9JL90; A0A571BF46; A2AQB2; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 3 3 0.6313 0 1 1 1 453.5531 1358.64475 1358.64979 -3.71 -0.00168 0/0 0 0 244382.2031 HCD 30 MS2 54.01469 18.8 110 24.5013 3859 3859 3854 QEplus033719.raw F4 37.7 6.7 13.8 29.6 10.7 14.2 53 3.39 1 FALSE 1.14E-05 0.000205 0.797 -250 1552 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REGEAAASHR [R].rEGEAAASHR.[Q] N-Term(TMT6plex) 2 Q3UVK0 Endoplasmic reticulum metallopeptidase 1 OS=Mus musculus OX=10090 GN=Ermp1 PE=1 SV=2 Q3UVK0; Q3UVK0-2 Endoplasmic reticulum metallopeptidase 1 OS=Mus musculus OX=10090 GN=Ermp1 PE=1 SV=2; Isoform 2 of Endoplasmic reticulum metallopeptidase 1 OS=Mus musculus OX=10090 GN=Ermp1 1 3 3 0.6311 0 1 1 1 438.23517 1312.69095 1312.69193 -0.74 -0.00032 0/0 0 0 199770.3281 HCD 30 MS2 11.9919 12.7 110 24.5214 3864 3864 3863 QEplus033719.raw F4 24.7 10 13.8 8.7 7.4 11.6 222 3.09 1 FALSE 1.14E-05 8.06E-07 1.255 -250 1560 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHTNQVSR [K].gHTNQVSR.[M] N-Term(TMT6plex) 8 O88342 WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3 Q3TNK2; O88342; Q9DC08; Q3TE06; Q3U136; A0A0J9YU05; Q9DBM8; Q80ZI9 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat domain 1 (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1 0 2 2 0.4561 0 1 1 1 564.30945 1127.61162 1127.61189 -0.24 -0.00013 0/0 0 0 186150.5156 HCD 30 MS2 0 16.9 110 24.5264 3866 3866 3863 QEplus033719.raw F4 54.5 9 13.8 7.5 7.6 8.8 136 1.14 1 FALSE 0.005048 0.08723 0.042 -250 1568 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSRPTGRPR [R].nSRPTGRPR.[R] N-Term(TMT6plex) 5 Q3UXS8 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf10 PE=2 SV=1 Q3UXS8; Q3UDH7; Q3UYX6; Q9R0U0; Q3UA07 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf10 PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf10 PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf10 PE=2 SV=1; Serine/arginine-rich splicing factor 10 OS=Mus musculus OX=10090 GN=Srsf10 PE=1 SV=2; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf10 PE=2 SV=1 0 3 3 0.2096 0 1 1 1 423.91486 1269.73001 1269.73373 -2.93 -0.00124 0/0 0 0 153166.8281 HCD 30 MS2 73.27774 26.2 110 24.5289 3867 3867 3863 QEplus033719.raw F4 29.1 21.4 29.5 27.5 29.8 20 305 1.67 1 FALSE 0.002869 0.05652 0.123 -250 1618 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQREEEARR [R].aQREEEARR.[Q] N-Term(TMT6plex) 6 Q3U9V1 TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1 F8WJK8; Q3U9V1; Q3U8D2; Q3U3N7; Q3TGW8; Q99L47 Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1 2 3 3 0.2997 0 1 1 1 458.58615 1373.7439 1373.74469 -0.58 -0.00026 0/0 0 0 5678629 HCD 30 MS2 38.76987 149.2 96.235 24.5811 3883 3883 3882 QEplus033719.raw F4 301.9 81.5 163.1 138.5 73.4 136.8 325 3.17 1 FALSE 0.001559 0.02355 0.254 -250 1643 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERYQSHR [K].eRYQSHR.[D] N-Term(TMT6plex) 4 Q80Y09 Pdcd6ip protein OS=Mus musculus OX=10090 GN=Pdcd6ip PE=2 SV=1 Q6ZPS9; Q9WU78-3; Q80Y09; Q9WU78 MKIAA1375 protein (Fragment) OS=Mus musculus OX=10090 GN=Pdcd6ip PE=2 SV=1; Isoform 3 of Programmed cell death 6-interacting protein OS=Mus musculus OX=10090 GN=Pdcd6ip; Pdcd6ip protein OS=Mus musculus OX=10090 GN=Pdcd6ip PE=2 SV=1; Programmed cell death 6-interacting protein OS=Mus musculus OX=10090 GN=Pdcd6ip PE=1 SV=3 1 3 3 0.3533 0 1 1 1 402.2193 1204.64334 1204.63843 4.08 0.00164 0/0 0 0 162966.1094 HCD 30 MS2 37.61005 23.7 110 24.5961 3889 3889 3882 QEplus033719.raw F4 62.4 10.3 19.6 21 16.7 11.9 243 1.84 1 FALSE 0.002249 0.04386 0.161 -250 1674 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CQHGECANTR [R].cQHGEcANTR.[G] N-Term(TMT6plex); C1(Carbamidomethyl); C6(Carbamidomethyl) 7 D3Z598 Latent-transforming growth factor beta-binding protein 4 OS=Mus musculus OX=10090 GN=Ltbp4 PE=1 SV=1 D3Z598; Q8K4G1; E9QPS5; Q8K4G1-2; B2RU79; Q3UGU1; Q8K4G1-3 Latent-transforming growth factor beta-binding protein 4 OS=Mus musculus OX=10090 GN=Ltbp4 PE=1 SV=1; Latent-transforming growth factor beta-binding protein 4 OS=Mus musculus OX=10090 GN=Ltbp4 PE=1 SV=2; Latent-transforming growth factor beta-binding protein 4 OS=Mus musculus OX=10090 GN=Ltbp4 PE=1 SV=1; Isoform 2 of Latent-transforming growth factor beta-binding protein 4 OS=Mus musculus OX=10090 GN=Ltbp4; Latent transforming growth factor beta binding protein 4 OS=Mus musculus OX=10090 GN=Ltbp4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ltbp4 PE=2 SV=1; Isoform 3 of Latent-transforming growth factor beta-binding protein 4 OS=Mus musculus OX=10090 GN=Ltbp4 0 3 3 0.831 0 1 1 1 487.88901 1461.65247 1461.65245 0.02 0.00001 0/0 0 0 499966.9688 HCD 30 MS2 17.38053 17.1 110 24.6213 3897 3897 3895 QEplus033719.raw F4 29.4 6 21 22.3 7.4 16.8 16 3.55 1 FALSE 1.14E-05 0.0001087 0.85 -250 1681 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AREEEEQRR [K].aREEEEQRR.[I] N-Term(TMT6plex) 5 A0A0G2JEX1 Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1 A0A0G2JEX1; Q7TPW1; A0A0G2JG59; A0A0G2JFD8; A0A0G2JGI1 Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=3; Nexilin (Fragment) OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1 2 3 3 0.5358 0 1 1 1 477.92154 1431.75006 1431.75017 -0.07 -0.00003 0/0 0 0 302438.0625 HCD 30 MS2 7.220947 26.7 110 24.6238 3898 3898 3895 QEplus033719.raw F4 43.6 10.1 29.4 31.7 20.1 25.4 253 2.93 1 FALSE 0.001421 0.02016 0.28 -250 1686 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDERPHR [R].dDERPHR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 0 3 3 0.5243 0 1 1 1 385.20129 1153.58933 1153.59115 -1.58 -0.00061 0/0 0 0 178047.2969 HCD 30 MS2 36.02431 32.2 110 24.6263 3899 3899 3895 QEplus033719.raw F4 57.9 20.1 31.2 27.1 22.8 34.2 140 2.06 1 FALSE 0.0001504 0.003354 0.546 -250 1711 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AREEEEQRR [K].aREEEEQRR.[I] N-Term(TMT6plex) 5 A0A0G2JEX1 Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1 A0A0G2JEX1; Q7TPW1; A0A0G2JG59; A0A0G2JFD8; A0A0G2JGI1 Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=3; Nexilin (Fragment) OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1 2 4 4 0.4571 0 1 1 1 358.69284 1431.74953 1431.75017 -0.44 -0.00016 0/0 0 0 428739.0313 HCD 30 MS2 53.46733 57.4 110 24.6362 3903 3903 3895 QEplus033719.raw F4 118.8 20.8 58.5 62.5 29.9 54.1 244 2.8 1 FALSE 0.0003312 0.006348 0.471 -250 1727 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RANCEAAR [K].rANcEAAR.[S] N-Term(TMT6plex); C4(Carbamidomethyl) 4 Q8VDJ3 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1 Q8VDJ3; A0PJE9; A0A087WP83; Q3V1M8 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Hdlbp protein (Fragment) OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1; Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1 1 2 2 0.3226 0 1 1 1 588.80829 1176.6093 1176.61051 -1.02 -0.0006 0/0 0 0 172310.875 HCD 30 MS2 35.88512 11.1 110 24.6588 3909 3909 3908 QEplus033719.raw F4 31.9 6.2 12.4 3.5 4.5 8 183 1.86 1 FALSE 0.006969 0.1105 -0.021 -250 1790 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NHHELDHR [K].nHHELDHR.[EG] N-Term(TMT6plex) 15 Q08122-1 Isoform 1 of Transducin-like enhancer protein 3 OS=Mus musculus OX=10090 GN=Tle3 Q08122-1; E0CYM5; J3KMT7; E0CXU1; Q08122-2; F6TS96; E0CY14; Q3TY99; E0CXS2; Q08122-4; F8WIE2; E0CY76; Q08122; Q80TC1; E0CXS9 Isoform 1 of Transducin-like enhancer protein 3 OS=Mus musculus OX=10090 GN=Tle3; Transducin-like enhancer protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Tle3 PE=1 SV=8; Transducin-like enhancer protein 3 OS=Mus musculus OX=10090 GN=Tle3 PE=1 SV=1; Transducin-like enhancer protein 3 OS=Mus musculus OX=10090 GN=Tle3 PE=1 SV=1; Isoform 2 of Transducin-like enhancer protein 3 OS=Mus musculus OX=10090 GN=Tle3; Transducin-like enhancer protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Tle3 PE=1 SV=1; Transducin-like enhancer protein 3 OS=Mus musculus OX=10090 GN=Tle3 PE=1 SV=1; Transducin-like enhancer protein 3 OS=Mus musculus OX=10090 GN=Tle3 PE=1 SV=1; Transducin-like enhancer protein 3 OS=Mus musculus OX=10090 GN=Tle3 PE=1 SV=1; Isoform 4 of Transducin-like enhancer protein 3 OS=Mus musculus OX=10090 GN=Tle3; Transducin-like enhancer protein 3 OS=Mus musculus OX=10090 GN=Tle3 PE=1 SV=1; Transducin-like enhancer protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Tle3 PE=1 SV=1; Transducin-like enhancer protein 3 OS=Mus musculus OX=10090 GN=Tle3 PE=1 SV=3; MKIAA1547 protein (Fragment) OS=Mus musculus OX=10090 GN=Tle3 PE=2 SV=1; Transducin-like enhancer protein 3 OS=Mus musculus OX=10090 GN=Tle3 PE=1 SV=1 0 3 3 0.5498 0 1 1 1 429.55646 1286.65482 1286.65515 -0.25 -0.00011 0/0 0 0 363656.0625 HCD 30 MS2 22.28421 23.2 110 24.6989 3922 3922 3921 QEplus033719.raw F4 36 20.1 19.7 12.8 35.1 15.7 124 3.11 1 FALSE 1.14E-05 1.23E-05 1.03 -250 1796 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSRPTGRPR [R].nSRPTGRPR.[R] N-Term(TMT6plex) 5 Q3UXS8 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf10 PE=2 SV=1 Q3UXS8; Q3UDH7; Q3UYX6; Q9R0U0; Q3UA07 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf10 PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf10 PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf10 PE=2 SV=1; Serine/arginine-rich splicing factor 10 OS=Mus musculus OX=10090 GN=Srsf10 PE=1 SV=2; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf10 PE=2 SV=1 0 3 3 0.3144 0 1 1 1 423.91592 1269.73322 1269.73373 -0.4 -0.00017 0/0 0 0 3137034.25 HCD 30 MS2 1.004365 76 110 24.7014 3923 3923 3921 QEplus033719.raw F4 109.7 65.1 77.4 73.1 77.8 53.2 302 2.29 1 FALSE 0.004206 0.07705 0.069 -250 1809 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSSRGETEER [K].dSSRGETEER.[K] N-Term(TMT6plex) 9 F7ADQ2 GTPase-activating protein and VPS9 domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Gapvd1 PE=1 SV=1 F6X819; Q6PAR5-4; F7ADS7; Q6PAR5-5; Q6PAR5-6; F7ADQ2; Q6PAR5; Q6PAR5-2; F7ADT6 GTPase-activating protein and VPS9 domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Gapvd1 PE=1 SV=1; Isoform 4 of GTPase-activating protein and VPS9 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Gapvd1; GTPase-activating protein and VPS9 domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Gapvd1 PE=1 SV=1; Isoform 5 of GTPase-activating protein and VPS9 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Gapvd1; Isoform 6 of GTPase-activating protein and VPS9 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Gapvd1; GTPase-activating protein and VPS9 domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Gapvd1 PE=1 SV=1; GTPase-activating protein and VPS9 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Gapvd1 PE=1 SV=2; Isoform 2 of GTPase-activating protein and VPS9 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Gapvd1; GTPase-activating protein and VPS9 domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Gapvd1 PE=1 SV=1 1 3 3 0.4828 0 1 1 1 465.56204 1394.67157 1394.67092 0.47 0.00022 0/0 0 0 349683.0625 HCD 30 MS2 20.52644 25.5 110 24.7064 3925 3925 3921 QEplus033719.raw F4 39 16.3 28.8 19.4 27.2 22.5 81 2.61 1 FALSE 2.26E-05 0.001094 0.654 -250 1825 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRDQEDTPNQR [R].rRDQEDTPNQR.[Y] N-Term(TMT6plex) 3 A0A286YDD7 Terminal uridylyltransferase 7 (Fragment) OS=Mus musculus OX=10090 GN=Tut7 PE=1 SV=1 A0A286YDD7; Q5BLK4; E9PUA2 Terminal uridylyltransferase 7 (Fragment) OS=Mus musculus OX=10090 GN=Tut7 PE=1 SV=1; Terminal uridylyltransferase 7 OS=Mus musculus OX=10090 GN=Tut7 PE=1 SV=3; Terminal uridylyltransferase 7 OS=Mus musculus OX=10090 GN=Tut7 PE=1 SV=1 2 4 4 0.5483 0 1 1 1 411.71573 1643.84109 1643.84111 -0.01 -0.00001 0/0 0 0 263912.0938 HCD 30 MS2 26.896 12.3 110 24.7114 3927 3927 3921 QEplus033719.raw F4 25.2 7.5 11.8 8.5 10.7 10.2 219 3.83 1 FALSE 1.14E-05 1.20E-07 1.413 -250 1846 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDERPHR [R].dDERPHR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 0 2 2 0.6067 0 1 1 1 577.29932 1153.59136 1153.59115 0.18 0.0001 0/0 0 0 87753.57031 HCD 30 MS2 0 5.7 110 24.7288 3933 3933 3932 QEplus033719.raw F4 9.2 6.3 5.6 4.7 3.7 4.6 140 1.5 1 FALSE 0.005324 0.09084 0.032 -250 1855 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNVDHHCPQNNR [K].rNVDHHcPQNNR.[V] N-Term(TMT6plex); C7(Carbamidomethyl) 1 Q6PGG6 Guanine nucleotide-binding protein-like 3-like protein OS=Mus musculus OX=10090 GN=Gnl3l PE=1 SV=1 Q6PGG6 Guanine nucleotide-binding protein-like 3-like protein OS=Mus musculus OX=10090 GN=Gnl3l PE=1 SV=1 1 3 3 0.7153 0 1 1 1 592.62677 1775.86576 1775.86695 -0.67 -0.0004 0/0 0 0 317496.9375 HCD 30 MS2 29.47899 5.8 110 24.7338 3935 3935 3932 QEplus033719.raw F4 6 3.8 6.9 3.7 5.9 8.6 117 2.81 1 FALSE 1.14E-05 1.37E-05 1.021 -250 1875 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQGSHREPEDR [R].eQGSHREPEDR.[H] N-Term(TMT6plex) 6 B1AYU7 Pre-mRNA-splicing factor CWC22 homolog OS=Mus musculus OX=10090 GN=Cwc22 PE=1 SV=1 B1AYU7; A2AK42; Q8C5N3; Q8C5N3-2; A2AK44; Q6ZPL7 Pre-mRNA-splicing factor CWC22 homolog OS=Mus musculus OX=10090 GN=Cwc22 PE=1 SV=1; Predicted gene 13691 OS=Mus musculus OX=10090 GN=Gm13697 PE=4 SV=1; Pre-mRNA-splicing factor CWC22 homolog OS=Mus musculus OX=10090 GN=Cwc22 PE=1 SV=1; Isoform 2 of Pre-mRNA-splicing factor CWC22 homolog OS=Mus musculus OX=10090 GN=Cwc22; Predicted gene 13695 OS=Mus musculus OX=10090 GN=Gm13695 PE=4 SV=1; MKIAA1604 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA1604 PE=4 SV=1 1 3 3 0.4728 0 1 1 1 523.59247 1568.76285 1568.76146 0.89 0.00046 0/0 0 0 130543.875 HCD 30 MS2 57.20526 25.8 110 24.7438 3939 3939 3932 QEplus033719.raw F4 34 20 23.6 24.4 33 19.7 129 2.39 1 FALSE 1.14E-05 1.13E-05 1.037 -250 1887 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSSNPPAR [K].rSSNPPAR.[S] N-Term(TMT6plex) 7 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 3 3 0.4611 0 1 1 1 371.88226 1113.63224 1113.63262 -0.35 -0.00013 0/0 0 0 5244803.5 HCD 30 MS2 26.49774 121.7 110 24.7591 3943 3943 3942 QEplus033719.raw F4 321.7 54.3 110.6 76.6 53.4 113.8 150 3.34 1 FALSE 1.14E-05 9.58E-06 1.051 -250 1906 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGMDDDRGPR [R].rGmDDDRGPR.[R] N-Term(TMT6plex); M3(Oxidation) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 2 3 3 0.565 0 1 1 1 473.90329 1419.69532 1419.69603 -0.5 -0.00024 0/0 0 0 1041387.688 HCD 30 MS2 14.67024 31.6 110 24.7666 3946 3946 3942 QEplus033719.raw F4 64.7 13.4 33 24.8 18.8 35.1 94 2 1 FALSE 0.004757 0.08358 0.052 -250 1914 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRDQEDTPNQR [R].rRDQEDTPNQR.[Y] N-Term(TMT6plex) 3 A0A286YDD7 Terminal uridylyltransferase 7 (Fragment) OS=Mus musculus OX=10090 GN=Tut7 PE=1 SV=1 A0A286YDD7; Q5BLK4; E9PUA2 Terminal uridylyltransferase 7 (Fragment) OS=Mus musculus OX=10090 GN=Tut7 PE=1 SV=1; Terminal uridylyltransferase 7 OS=Mus musculus OX=10090 GN=Tut7 PE=1 SV=3; Terminal uridylyltransferase 7 OS=Mus musculus OX=10090 GN=Tut7 PE=1 SV=1 2 3 3 0.6456 0 1 1 1 548.61841 1643.84067 1643.84111 -0.27 -0.00015 0/0 0 0 434817.5 HCD 30 MS2 34.7249 11.1 110 24.7691 3947 3947 3942 QEplus033719.raw F4 11.8 8.4 11.6 10 15.5 9.2 219 3.16 1 FALSE 1.14E-05 0.0007307 0.69 -250 1934 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERSPSER [K].eRSPSER.[T] N-Term(TMT6plex) 18 Q8BQK0 TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Asph PE=2 SV=1 Q8BQK0; Q8CBM2; A2AL75; A2AL85; Q9EQ65; A2AL77; Q9EQ66; Q9EQ62; Q91WG6; Q9EQ63; Q920F8; Q8BSY0; Q920F9; Q3TU40; A2AL76; A2AL81; Q9EQ67; A2AL83 TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Asph PE=2 SV=1; Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1; Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1; Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1; Aspartyl beta-hydroxylase 2.8 kb transcript OS=Mus musculus OX=10090 GN=Asph PE=2 SV=1; Aspartyl/asparaginyl beta-hydroxylase (Fragment) OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1; Aspartly beta-hydroxylase OS=Mus musculus OX=10090 GN=ASPH PE=3 SV=1; Aspartyl beta-hydroxylase cardiac isoform 2 (Fragment) OS=Mus musculus OX=10090 GN=Asph PE=2 SV=1; Asph protein OS=Mus musculus OX=10090 GN=Asph PE=2 SV=1; Aspartyl beta-hydroxylase cardiac isoform 1 (Fragment) OS=Mus musculus OX=10090 GN=Asph PE=2 SV=1; Cardiac junctate 2 OS=Mus musculus OX=10090 GN=Asph PE=2 SV=1; Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1; Cardiac junctate 1 OS=Mus musculus OX=10090 GN=Asph PE=2 SV=1; Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1; Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1; Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1; Aspartyl beta-hydroxylase Humbug splice variant OS=Mus musculus OX=10090 GN=ASPH PE=4 SV=1; Aspartyl/asparaginyl beta-hydroxylase (Fragment) OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1 1 3 3 0.3391 0 1 1 1 363.86606 1089.58362 1089.585 -1.27 -0.00046 0/0 0 0 1447052.75 HCD 30 MS2 29.66253 124.2 110 24.7917 3953 3953 3952 QEplus033719.raw F4 241.4 75.8 129.6 85.7 84.6 127.8 305 2.33 1 FALSE 0.003058 0.0594 0.116 -250 1949 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEEDGRHQEEER [R].qEEDGRHQEEER.[V] N-Term(TMT6plex) 6 E9Q852 Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=2 E9Q852; E9PYX7; E9Q9C3; Q9QZQ1; Q9QZQ1-2; F7C3I9 Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=2; Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=1; Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=1; Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=3; Isoform 1 of Afadin OS=Mus musculus OX=10090 GN=Afdn; Afadin (Fragment) OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=2 1 3 3 0.5227 0 1 1 1 590.94489 1770.8201 1770.82043 -0.19 -0.00011 0/0 0 0 434294.5313 HCD 30 MS2 0 10.5 110 24.8016 3957 3957 3952 QEplus033719.raw F4 10.1 11.5 10.3 7.5 12.3 11.1 50 2.2 1 FALSE 1.14E-05 2.54E-05 0.971 -250 2084 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAQEQSPR [K].rAQEQSPR.[K] N-Term(TMT6plex) 2 D3YYT1 Glyoxylate reductase 1 homolog OS=Mus musculus OX=10090 GN=Glyr1 PE=1 SV=1 D3YYT1; Q922P9 Glyoxylate reductase 1 homolog OS=Mus musculus OX=10090 GN=Glyr1 PE=1 SV=1; Putative oxidoreductase GLYR1 OS=Mus musculus OX=10090 GN=Glyr1 PE=1 SV=1 1 3 3 0.5203 0 1 1 1 400.8927 1200.66355 1200.66465 -0.92 -0.00037 0/0 0 0 367016.0625 HCD 30 MS2 28.55419 25.6 110 24.8766 3984 3984 3976 QEplus033719.raw F4 51.4 19.3 30.5 18.7 15.6 18 249 2.96 1 FALSE 1.14E-05 0.0001248 0.839 -250 2088 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDSQQDSQQPQR [R].rDSQQDSQQPQR.[Q] N-Term(TMT6plex) 1 A0A1B0GR85 RIKEN cDNA 2900026A02 gene OS=Mus musculus OX=10090 GN=2900026A02Rik PE=1 SV=1 A0A1B0GR85 RIKEN cDNA 2900026A02 gene OS=Mus musculus OX=10090 GN=2900026A02Rik PE=1 SV=1 1 3 3 0.7316 0 1 1 1 567.95392 1701.8472 1701.84659 0.36 0.0002 0/0 0 0 154751.5625 HCD 30 MS2 0 2.7 110 24.8791 3985 3985 3976 QEplus033719.raw F4 2.6 4.4 3 5.9 172 2.31 1 FALSE 1.14E-05 0.0003849 0.744 -250 2157 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTDDDRPPRR [R].hTDDDRPPRR.[G] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.7197 0 1 1 1 498.59705 1493.77658 1493.77705 -0.31 -0.00016 0/0 0 0 118247.8203 HCD 30 MS2 0 23.7 110 24.9366 4004 4004 4000 QEplus033719.raw F4 30 16 23 25.7 24.3 23.4 273 3.14 1 FALSE 4.43E-05 0.001655 0.616 -250 2180 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DHGGGGGPEAR [K].dHGGGGGPEAR.[L] N-Term(TMT6plex) 2 E1U8D0 Protein SOGA1 OS=Mus musculus OX=10090 GN=Soga1 PE=1 SV=3 E1U8D0; A2ACV6 Protein SOGA1 OS=Mus musculus OX=10090 GN=Soga1 PE=1 SV=3; Protein SOGA1 OS=Mus musculus OX=10090 GN=Soga1 PE=1 SV=1 0 3 3 0.7539 0 1 1 1 413.54013 1238.60584 1238.60753 -1.36 -0.00056 0/0 0 0 271124.3438 HCD 30 MS2 0 15.7 110 24.9589 4012 4012 4011 QEplus033719.raw F4 21.8 9.6 18.6 12.6 15.4 16.4 89 4.47 1 FALSE 1.14E-05 1.35E-10 1.972 -250 2187 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRANMQHR [K].dRANMQHR.[Y] N-Term(TMT6plex) 3 Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 Q8R582; Q9Z2X1-2; Q9Z2X1 Hnrpf protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpf PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf; Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 1 3 3 0.5797 0 1 1 1 419.55374 1256.64667 1256.64795 -1.02 -0.00043 0/0 0 0 3330233.5 HCD 30 MS2 23.31481 139.9 110 24.9639 4014 4014 4011 QEplus033719.raw F4 291.6 98.7 146.4 107.4 99.2 96.1 131 4.14 1 FALSE 1.14E-05 0.0002606 0.777 -250 2193 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTDDDRPPRR [R].hTDDDRPPRR.[G] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 4 4 0.7123 0 1 1 1 374.19919 1493.77492 1493.77705 -1.43 -0.00053 0/0 0 0 1646910.875 HCD 30 MS2 16.76218 97.2 110 24.9664 4015 4015 4011 QEplus033719.raw F4 148.8 72.4 88.7 79.5 108.7 84.9 266 5.04 1 FALSE 1.14E-05 4.27E-08 1.497 -250 2202 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCSDREGHGPNTR [R].ncSDREGHGPNTR.[D] N-Term(TMT6plex); C2(Carbamidomethyl) 8 O70305; F6U2C2 Ataxin-2 OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1;Ataxin-2 (Fragment) OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1 O70305-3; Q3UX07; A0A286YDU2; O70305; E9QM77; O70305-2; F7B6X4; F6U2C2 Isoform 3 of Ataxin-2 OS=Mus musculus OX=10090 GN=Atxn2; LsmAD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Atxn2 PE=2 SV=1; Ataxin-2 (Fragment) OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1; Ataxin-2 OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1; Ataxin-2 OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1; Isoform 2 of Ataxin-2 OS=Mus musculus OX=10090 GN=Atxn2; Ataxin-2 (Fragment) OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1; Ataxin-2 (Fragment) OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1 1 3 3 0.6584 0 1 1 1 576.93872 1728.80161 1728.80334 -1 -0.00058 0/0 0 0 652692.5 HCD 30 MS2 4.837124 32.5 110 24.9714 4017 4017 4011 QEplus033719.raw F4 42.7 19.7 26.4 34.4 54.3 17.2 54 3.22 2 FALSE 1.14E-05 2.62E-09 1.728 -250 2210 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAAQETER [K].rAAQETER.[L] N-Term(TMT6plex) 1 Q8CI32 BAG family molecular chaperone regulator 5 OS=Mus musculus OX=10090 GN=Bag5 PE=1 SV=1 Q8CI32 BAG family molecular chaperone regulator 5 OS=Mus musculus OX=10090 GN=Bag5 PE=1 SV=1 1 3 3 0.3667 0 1 1 1 397.22125 1189.6492 1189.64866 0.45 0.00018 0/0 0 0 374702.1563 HCD 30 MS2 41.36893 22 110 24.9738 4018 4018 4011 QEplus033719.raw F4 45.1 13.9 22.9 14.8 12.4 23 289 2.1 1 FALSE 0.0002419 0.004802 0.506 -250 2229 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGDSGNETTAHR [K].qGDSGNETTAHR.[T] N-Term(TMT6plex) 2 Q3TA49 MARVEL domain-containing protein OS=Mus musculus OX=10090 GN=Cmtm3 PE=2 SV=1 Q3TA49; Q99LJ5 MARVEL domain-containing protein OS=Mus musculus OX=10090 GN=Cmtm3 PE=2 SV=1; CKLF-like MARVEL transmembrane domain-containing protein 3 OS=Mus musculus OX=10090 GN=Cmtm3 PE=2 SV=1 0 3 3 0.7742 0 1 1 1 501.2446 1501.71924 1501.71926 -0.01 -0.00001 0/0 0 0 244788.1563 HCD 30 MS2 43.23327 19 110 24.9788 4020 4020 4011 QEplus033719.raw F4 22.1 13.2 17.8 22.6 16.3 22.1 87 3.72 1 FALSE 1.14E-05 2.82E-08 1.532 -250 2234 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SREHGAAMR [R].sREHGAAMR.[R] N-Term(TMT6plex) 2 Q8K199 COX assembly mitochondrial protein 2 homolog OS=Mus musculus OX=10090 GN=Cmc2 PE=3 SV=1 Q8K199; F8WHQ0 COX assembly mitochondrial protein 2 homolog OS=Mus musculus OX=10090 GN=Cmc2 PE=3 SV=1; COX assembly mitochondrial protein OS=Mus musculus OX=10090 GN=Cmc2 PE=1 SV=1 1 3 3 0.3784 0 1 1 1 415.22278 1243.65378 1243.6527 0.87 0.00036 0/0 0 0 247266.0781 HCD 30 MS2 12.39049 15.8 110 24.9813 4021 4021 4011 QEplus033719.raw F4 25.9 11.2 12.7 16.1 16.9 12.1 146 1.85 1 FALSE 0.004055 0.07498 0.075 -250 2240 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNDRGPGGPR [R].rNDRGPGGPR.[G] N-Term(TMT6plex) 5 P97379 Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2 PE=1 SV=2 P97379; P97379-2; Q3U931; Q5DU21; Q3U6B1 Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2 PE=1 SV=2; Isoform B of Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2; Uncharacterized protein OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1; MKIAA0660 protein (Fragment) OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1 2 3 3 0.6815 0 1 1 1 437.57928 1310.7233 1310.7239 -0.45 -0.0002 0/0 0 0 691597.625 HCD 30 MS2 22.38838 41.2 110 24.9886 4023 4023 4022 QEplus033719.raw F4 57.7 30.7 54.8 26.4 50.2 27.5 325 2.48 1 FALSE 1.14E-05 0.0002904 0.768 -250 2264 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NADDDRGPRR [R].nADDDRGPRR.[G] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 2 4 4 0.704 0 1 1 1 350.9353 1400.71938 1400.7192 0.13 0.00004 0/0 0 0 1630069.75 HCD 30 MS2 11.20863 73.2 110 24.9961 4026 4026 4022 QEplus033719.raw F4 102.3 53.4 70 58.7 96 58.8 192 3.21 1 FALSE 2.26E-05 0.0009987 0.662 -250 2272 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHNHLER [K].qHNHLER.[A] N-Term(TMT6plex) 2 Q3B7Z2 Oxysterol-binding protein 1 OS=Mus musculus OX=10090 GN=Osbp PE=1 SV=3 Q3B7Z2; Q3B7Z2-2 Oxysterol-binding protein 1 OS=Mus musculus OX=10090 GN=Osbp PE=1 SV=3; Isoform 2 of Oxysterol-binding protein 1 OS=Mus musculus OX=10090 GN=Osbp 0 3 3 0.4922 0 1 1 1 388.21381 1162.62687 1162.62787 -0.86 -0.00033 0/0 0 0 1052725.375 HCD 30 MS2 38.36165 71.9 110 24.9986 4027 4027 4022 QEplus033719.raw F4 144.1 36.8 63.8 74.8 46.6 65.3 267 3.84 1 FALSE 1.14E-05 0.000207 0.797 -250 2311 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQEHTDTGDR [R].aQEHTDTGDR.[S] N-Term(TMT6plex) 1 Q8BYU6 Torsin-1A-interacting protein 2 OS=Mus musculus OX=10090 GN=Tor1aip2 PE=1 SV=1 Q8BYU6 Torsin-1A-interacting protein 2 OS=Mus musculus OX=10090 GN=Tor1aip2 PE=1 SV=1 0 3 3 0.6426 0 1 1 1 453.55463 1358.64933 1358.64979 -0.34 -0.00015 0/0 0 0 542676.75 HCD 30 MS2 14.20711 37.3 110 25.0214 4035 4035 4033 QEplus033719.raw F4 70.6 20.6 42.7 33.4 23.5 32.8 53 2.77 1 FALSE 1.14E-05 0.0009384 0.668 -250 2318 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGPDEDR [R].rGPDEDR.[F] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.617 0 1 1 1 358.52243 1073.55274 1073.5537 -0.9 -0.00032 0/0 0 0 1319040.125 HCD 30 MS2 7.356413 73.4 110 25.0239 4036 4036 4033 QEplus033719.raw F4 189.2 38 73.6 40 29.4 70.4 88 2.82 1 FALSE 0.001293 0.01757 0.304 -250 2324 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRANMQHR [K].dRANMQHR.[Y] N-Term(TMT6plex) 3 Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 Q8R582; Q9Z2X1-2; Q9Z2X1 Hnrpf protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpf PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf; Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 1 2 2 0.5042 0 1 1 1 628.82739 1256.64751 1256.64795 -0.35 -0.00022 0/0 0 0 753604.5 HCD 30 MS2 7.634205 14 110 25.0264 4037 4037 4033 QEplus033719.raw F4 29.1 8.4 13.5 13 9.6 10.6 132 2.38 1 FALSE 0.001702 0.02801 0.227 -250 2329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETRDDERPHR [R].eTRDDERPHR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 4 4 0.5764 0 1 1 1 385.70129 1539.78335 1539.78253 0.53 0.0002 0/0 0 0 591564.6875 HCD 30 MS2 23.89603 40.7 110 25.0289 4038 4038 4033 QEplus033719.raw F4 61.5 25.1 38.6 36.5 48.7 33.8 196 2.88 1 FALSE 1.14E-05 0.0007816 0.684 -250 2350 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHEEAESGEGGRR [K].eHEEAESGEGGRR.[R] N-Term(TMT6plex) 10 F6TQE2 Solute carrier family 12 member 4 (Fragment) OS=Mus musculus OX=10090 GN=Slc12a4 PE=1 SV=1 F6TQE2; Q3UDQ8; Q9JIS8; Q3TLV0; F8WIJ0; Q3U689; Q3TWV2; Q3U9N0; Q3TPD4; Q6NXV2 "Solute carrier family 12 member 4 (Fragment) OS=Mus musculus OX=10090 GN=Slc12a4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Solute carrier family 12 member 4 OS=Mus musculus OX=10090 GN=Slc12a4 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Solute carrier family 12 member 4 OS=Mus musculus OX=10090 GN=Slc12a4 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Solute carrier family 12, member 4 OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1" 1 3 3 0.7739 0 1 1 1 557.93475 1671.78971 1671.78841 0.78 0.00043 0/0 0 0 329092.4688 HCD 30 MS2 0 12.2 110 25.0364 4041 4041 4033 QEplus033719.raw F4 22.3 7.4 13.6 11.4 8.2 10.6 70 3.45 1 FALSE 1.14E-05 6.10E-07 1.278 -250 2364 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETRDDERPHR [R].eTRDDERPHR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.5458 0 1 1 1 513.93335 1539.7855 1539.78253 1.92 0.00099 0/0 0 0 181860.9531 HCD 30 MS2 41.60518 12.8 110 25.0488 4045 4045 4044 QEplus033719.raw F4 19.7 4.8 13.1 9.5 18.3 11.5 193 2.62 1 FALSE 5.44E-05 0.002635 0.571 -250 2371 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERQEQEEARR [K].eRQEQEEARR.[K] N-Term(TMT6plex) 3 Q60598 Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2 Q8BNA5; Q60598; Q921L6 SH3 domain-containing protein OS=Mus musculus OX=10090 GN=Cttn PE=2 SV=1; Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2; Cttn protein OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=1 2 3 3 0.4713 0 1 1 1 520.60791 1559.80918 1559.80875 0.28 0.00014 0/0 0 0 1141585.5 HCD 30 MS2 29.95254 31.5 110 25.0563 4048 4048 4044 QEplus033719.raw F4 32.5 21.4 33.6 34.6 39.4 27.6 236 3.48 1 FALSE 1.14E-05 4.55E-05 0.922 -250 2377 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTGGCHCGAVR [K].hTGGcHcGAVR.[F] N-Term(TMT6plex); C5(Carbamidomethyl); C7(Carbamidomethyl) 2 Q9CXS4 Centromere protein V OS=Mus musculus OX=10090 GN=Cenpv PE=1 SV=2 Q9CXS4; F6SS03 Centromere protein V OS=Mus musculus OX=10090 GN=Cenpv PE=1 SV=2; Centromere protein V (Fragment) OS=Mus musculus OX=10090 GN=Cenpv PE=1 SV=1 0 3 3 0.8571 0 1 1 1 480.89767 1440.67847 1440.6786 -0.09 -0.00004 0/0 0 0 463478.2188 HCD 30 MS2 20.48239 35.8 110 25.0588 4049 4049 4044 QEplus033719.raw F4 50.7 25.9 40.8 42.3 32.5 22.6 67 4.76 1 FALSE 1.14E-05 4.48E-14 2.633 -250 2389 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHNHLER [K].qHNHLER.[A] N-Term(TMT6plex) 2 Q3B7Z2 Oxysterol-binding protein 1 OS=Mus musculus OX=10090 GN=Osbp PE=1 SV=3 Q3B7Z2; Q3B7Z2-2 Oxysterol-binding protein 1 OS=Mus musculus OX=10090 GN=Osbp PE=1 SV=3; Isoform 2 of Oxysterol-binding protein 1 OS=Mus musculus OX=10090 GN=Osbp 0 2 2 0.2297 0 1 1 1 581.81757 1162.62786 1162.62787 -0.01 -0.00001 0/0 0 0 173937.9688 HCD 30 MS2 0 11.8 110 25.0638 4051 4051 4044 QEplus033719.raw F4 20.3 4.4 13.6 14.9 8.4 9.5 261 1.48 1 FALSE 0.004599 0.08168 0.057 -250 2395 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAATEHSQR [K].aAATEHSQR.[E] N-Term(TMT6plex) 4 Q3ULJ5 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 Q3ULJ5; Q3U5M8; P14685; Q8BK46 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus OX=10090 GN=Psmd3 PE=1 SV=3; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 0 3 3 0.7009 0 1 1 1 400.54935 1199.63349 1199.63301 0.39 0.00016 0/0 0 0 1565503.75 HCD 30 MS2 17.92999 71.3 110 25.0663 4052 4052 4044 QEplus033719.raw F4 219.1 24.9 53.1 28.4 20.9 81.2 156 4.68 1 FALSE 1.14E-05 1.63E-08 1.577 -250 2414 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHGNVQDR [R].aHGNVQDR.[I] N-Term(TMT6plex) 3 Q3U1J4 DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=2 Q91YC8; A0A494BAF6; Q3U1J4 DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=2 SV=1; DNA damage-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=1; DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=2 0 3 3 0.7041 0 1 1 1 375.87009 1125.59571 1125.59624 -0.47 -0.00018 0/0 0 0 3178877.5 HCD 30 MS2 10.95357 85.5 110 25.0893 4058 4058 4057 QEplus033719.raw F4 183.7 39.4 74.3 54.6 46.9 114.2 155 3.92 1 FALSE 1.14E-05 8.75E-07 1.248 -250 2419 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRDDGESVSR [K].rRDDGESVSR.[A] N-Term(TMT6plex) 2 Q9D4G5 "Processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) OS=Mus musculus OX=10090 GN=Pop1 PE=1 SV=1" Q9D4G5; Q8K205 "Processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) OS=Mus musculus OX=10090 GN=Pop1 PE=1 SV=1; Processing of 1, ribonuclease P/MRP family, (S. cerevisiae) OS=Mus musculus OX=10090 GN=Pop1 PE=1 SV=1" 2 3 3 0.6457 0 1 1 1 469.24979 1405.73481 1405.73452 0.2 0.0001 0/0 0 0 886702.125 HCD 30 MS2 6.523339 27.5 110 25.0943 4060 4060 4057 QEplus033719.raw F4 31.6 23.9 28.1 28.1 33.2 20.1 274 2.54 1 FALSE 1.14E-05 0.0003013 0.765 -250 2426 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHGNVQDR [R].aHGNVQDR.[I] N-Term(TMT6plex) 3 Q3U1J4 DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=2 Q91YC8; A0A494BAF6; Q3U1J4 DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=2 SV=1; DNA damage-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=1; DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=2 0 2 2 0.6373 0 1 1 1 563.30182 1125.59636 1125.59624 0.11 0.00006 0/0 0 0 499280.4375 HCD 30 MS2 0 46.4 110 25.0968 4061 4061 4057 QEplus033719.raw F4 144.1 19.2 38 20.8 8.2 47.8 124 2.84 1 FALSE 1.14E-05 9.21E-06 1.054 -250 2434 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAATEHSQR [K].aAATEHSQR.[E] N-Term(TMT6plex) 4 Q3ULJ5 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 Q3ULJ5; Q3U5M8; P14685; Q8BK46 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus OX=10090 GN=Psmd3 PE=1 SV=3; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 0 2 2 0.7257 0 1 1 1 600.32019 1199.6331 1199.63301 0.07 0.00004 0/0 0 0 392503.5 HCD 30 MS2 9.042192 32.6 110 25.0993 4062 4062 4057 QEplus033719.raw F4 96.5 11.4 31.5 11.6 8.3 36 164 2.88 1 FALSE 1.14E-05 4.56E-06 1.112 -250 2444 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGPPPRR [KR].rGPPPRR.[AY] N-Term(TMT6plex) 3 Q8C671 Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=2 SV=1 Q9DAE2; Q8C671; Q62093 "RNA-binding motif protein, X-linked-like 2 OS=Mus musculus OX=10090 GN=Rbmxl2 PE=1 SV=1; Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=2 SV=1; Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=1 SV=4" 2 3 3 0.5233 0 1 1 1 355.55948 1064.66388 1064.66386 0.02 0.00001 0/0 0 0 931129.25 HCD 30 MS2 55.67249 65.7 110 25.1068 4065 4065 4057 QEplus033719.raw F4 86.7 72.5 89.7 38.4 57 50 92 1.93 1 FALSE 0.003575 0.06839 0.092 -250 2467 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEQEEARR [R].qEQEEARR.[K] N-Term(TMT6plex) 3 Q60598 Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2 Q8BNA5; Q60598; Q921L6 SH3 domain-containing protein OS=Mus musculus OX=10090 GN=Cttn PE=2 SV=1; Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2; Cttn protein OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=1 1 3 3 0.0896 0 1 1 1 425.55969 1274.66452 1274.66504 -0.41 -0.00017 0/0 0 0 56413.02344 HCD 30 MS2 42.05416 13.8 110 25.1217 4070 4070 4068 QEplus033719.raw F4 29.5 8.7 15.3 9.8 9 10.6 212 0.67 1 FALSE 0.009555 0.1816 -0.119 -250 2476 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQREEEAR [R].aQREEEAR.[R] N-Term(TMT6plex) 6 Q3U9V1 TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1 F8WJK8; Q3U9V1; Q3U8D2; Q3U3N7; Q3TGW8; Q99L47 Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1 1 3 3 0.374 0 1 1 1 406.55252 1217.64301 1217.64358 -0.47 -0.00019 0/0 0 0 1482561.125 HCD 30 MS2 20.86615 122.2 110 25.1242 4071 4071 4068 QEplus033719.raw F4 328.6 57.2 116.5 74.3 35.8 120.7 228 2.54 1 FALSE 0.0006126 0.009059 0.42 -250 2519 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAGDGDCGSTHSR [R].aAGDGDcGSTHSR.[A] N-Term(TMT6plex); C7(Carbamidomethyl) 2 Q8VC30 Triokinase/FMN cyclase OS=Mus musculus OX=10090 GN=Tkfc PE=1 SV=1 Q8VC30; Q3UTZ4 Triokinase/FMN cyclase OS=Mus musculus OX=10090 GN=Tkfc PE=1 SV=1; ATP-dependent dihydroxyacetone kinase OS=Mus musculus OX=10090 GN=Tkfc PE=1 SV=1 0 3 3 1 0 1 1 1 507.23029 1519.6763 1519.67568 0.41 0.00021 0/0 0 0 226460.2969 HCD 30 MS2 0 8.1 110 25.1516 4081 4081 4079 QEplus033719.raw F4 15.6 3.9 7 8.2 9.7 3.9 23 3.48 1 FALSE 1.14E-05 2.06E-06 1.178 -250 2520 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRDDGESVSR [K].rRDDGESVSR.[A] N-Term(TMT6plex) 2 Q9D4G5 "Processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) OS=Mus musculus OX=10090 GN=Pop1 PE=1 SV=1" Q9D4G5; Q8K205 "Processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) OS=Mus musculus OX=10090 GN=Pop1 PE=1 SV=1; Processing of 1, ribonuclease P/MRP family, (S. cerevisiae) OS=Mus musculus OX=10090 GN=Pop1 PE=1 SV=1" 2 4 4 0.5517 0 1 1 1 352.18909 1405.73452 1405.73452 0 0 0/0 0 0 1939084.25 HCD 30 MS2 10.42307 35.3 110 25.154 4082 4082 4079 QEplus033719.raw F4 46.2 25.4 40.8 31.9 37.5 30.1 278 4.06 1 FALSE 1.14E-05 1.08E-06 1.231 -250 2526 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQREEEAR [R].aQREEEAR.[R] N-Term(TMT6plex) 6 Q3U9V1 TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1 F8WJK8; Q3U9V1; Q3U8D2; Q3U3N7; Q3TGW8; Q99L47 Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1 1 2 2 0.2704 0 1 1 1 609.32556 1217.64385 1217.64358 0.22 0.00013 0/0 0 0 512068.3125 HCD 30 MS2 5.61584 14.3 110 25.1566 4083 4083 4079 QEplus033719.raw F4 35.7 6.8 13.9 8.6 6.7 14.2 244 1.59 1 FALSE 1.14E-05 0.0008783 0.674 -250 2550 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTENDGQPGQR [R].rTENDGQPGQR.[S] N-Term(TMT6plex) 3 Q9CQS5 Serine/threonine-protein kinase RIO2 OS=Mus musculus OX=10090 GN=Riok2 PE=1 SV=1 Q9CQS5; Q8BHT4; A0A338P7E9 Serine/threonine-protein kinase RIO2 OS=Mus musculus OX=10090 GN=Riok2 PE=1 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Riok2 PE=2 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Riok2 PE=1 SV=1 1 3 3 0.7315 0 1 1 1 496.2572 1486.75705 1486.75598 0.72 0.00036 0/0 0 0 234612.5469 HCD 30 MS2 34.59878 7.8 110 25.1665 4087 4087 4079 QEplus033719.raw F4 9.4 4.8 10.8 3.7 9.3 8.8 206 2.98 1 FALSE 1.14E-05 0.0001034 0.854 -250 2568 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARAEEESR [K].aRAEEESR.[S] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.337 0 1 1 1 588.8125 1176.61772 1176.61703 0.59 0.00035 0/0 0 0 1891237.75 HCD 30 MS2 9.194154 36.5 110 25.1794 4091 4091 4090 QEplus033719.raw F4 104.9 15.9 33.3 24.2 9.9 30.7 235 2.73 2 FALSE 0.0006294 0.009522 0.412 -250 2579 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRDRDYSR [R].dRDRDYSR.[R] N-Term(TMT6plex) 10 Q80X50 Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1 A0A0G2JDV6; Q80X50-4; Q80X50-3; Q80X50-5; A0A0H2UH17; Q8BJ53; Q80X50-2; Q80X50; Q812D5; Q812D4 Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Isoform 4 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Isoform 3 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Isoform 5 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; UBA domain-containing protein OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1; Isoform 2 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Lingerer protein-2a OS=Mus musculus OX=10090 GN=lig-2a PE=2 SV=1; Lingerer protein-2b OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1 2 3 3 0.4052 0 1 1 1 437.89163 1311.66034 1311.66029 0.04 0.00002 0/0 0 0 278775.9688 HCD 30 MS2 62.70575 42.1 110 25.1842 4093 4093 4090 QEplus033719.raw F4 47.6 31.5 49.2 37.3 52.3 34.8 138 2.32 1 FALSE 0.007536 0.1231 -0.048 -250 2617 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDRRPDCR [R].cDRRPDcR.[D] N-Term(TMT6plex); C1(Carbamidomethyl); C7(Carbamidomethyl) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 1 3 3 0.6749 0 1 1 1 455.22244 1363.65277 1363.65205 0.53 0.00024 0/0 0 0 501463.25 HCD 30 MS2 22.98124 50.3 110 25.2191 4105 4105 4103 QEplus033719.raw F4 120.3 30.4 55.8 43.3 23.2 28.6 62 2.03 2 FALSE 0.001169 0.0157 0.324 -250 2620 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRYEHDRER [R].dRYEHDRER.[E] N-Term(TMT6plex) 3 E9Q784 Zinc finger CCCH domain-containing protein 13 OS=Mus musculus OX=10090 GN=Zc3h13 PE=1 SV=1 E9Q784; Q8CIK5; A0A2I3BPQ5 Zinc finger CCCH domain-containing protein 13 OS=Mus musculus OX=10090 GN=Zc3h13 PE=1 SV=1; Zc3h13 protein (Fragment) OS=Mus musculus OX=10090 GN=Zc3h13 PE=2 SV=1; Zinc finger CCCH domain-containing protein 13 OS=Mus musculus OX=10090 GN=Zc3h13 PE=1 SV=1 2 3 3 0.3726 0 1 1 1 502.25409 1504.74771 1504.74542 1.53 0.00077 0/0 0 0 123255.8438 HCD 30 MS2 22.61292 10.5 110 25.2216 4106 4106 4103 QEplus033719.raw F4 13.6 8.8 8.3 9.3 12 11.2 128 2.12 1 FALSE 0.003851 0.07259 0.081 -250 2623 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CHAANPNGR [R].cHAANPNGR.[Y] N-Term(TMT6plex); C1(Carbamidomethyl) 2 P02676 SWISS-PROT:P02676 (Bos taurus) similar to Fibrinogen beta chain precursor P02676; Q8K0E8 SWISS-PROT:P02676 (Bos taurus) similar to Fibrinogen beta chain precursor; Fibrinogen beta chain OS=Mus musculus OX=10090 GN=Fgb PE=1 SV=1 0 3 3 0.7978 0 1 1 1 409.20587 1225.60306 1225.60575 -2.2 -0.0009 0/0 0 0 107852.0469 HCD 30 MS2 57.65532 11.5 110 25.224 4107 4107 4103 QEplus033719.raw F4 20.9 7.2 13.5 8.9 8.8 9.5 81 2.72 1 TRUE 1.14E-05 0.0003228 0.759 -250 2634 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRSPDAER [K].qRSPDAER.[V] N-Term(TMT6plex) 1 Q91YN1 Protein FAM118A OS=Mus musculus OX=10090 GN=Fam118a PE=1 SV=1 Q91YN1 Protein FAM118A OS=Mus musculus OX=10090 GN=Fam118a PE=1 SV=1 1 3 3 0.473 0 1 1 1 396.54944 1187.63376 1187.63301 0.63 0.00025 0/0 0 0 220777.3125 HCD 30 MS2 42.6842 32 110 25.229 4109 4109 4103 QEplus033719.raw F4 50 39.9 34.3 21.9 23.5 22.4 160 2.22 1 FALSE 0.001658 0.02712 0.232 -250 2667 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AREEEEQR [K].aREEEEQR.[R] N-Term(TMT6plex) 5 A0A0G2JEX1 Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1 A0A0G2JEX1; Q7TPW1; A0A0G2JG59; A0A0G2JFD8; A0A0G2JGI1 Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=3; Nexilin (Fragment) OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1 1 3 3 0.4878 0 1 1 1 425.88788 1275.64908 1275.64906 0.02 0.00001 0/0 0 0 462795.8125 HCD 30 MS2 26.60528 54.1 110 25.259 4120 4120 4114 QEplus033719.raw F4 122.3 22 59.7 48.8 18.6 53.3 165 2.87 1 FALSE 0.0009447 0.01295 0.36 -250 2691 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERQEQEEAR [K].eRQEQEEAR.[R] N-Term(TMT6plex) 3 Q60598 Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2 Q8BNA5; Q60598; Q921L6 SH3 domain-containing protein OS=Mus musculus OX=10090 GN=Cttn PE=2 SV=1; Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2; Cttn protein OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=1 1 2 2 0.5251 0 1 1 1 702.35748 1403.70769 1403.70764 0.04 0.00003 0/0 0 0 133856.6094 HCD 30 MS2 22.27364 5.7 110 25.269 4124 4124 4114 QEplus033719.raw F4 7.8 3.6 5.7 4.9 6.4 5.7 133 2.19 1 FALSE 0.001257 0.01713 0.308 -250 2697 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERQEQEEAR [K].eRQEQEEAR.[R] N-Term(TMT6plex) 3 Q60598 Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2 Q8BNA5; Q60598; Q921L6 SH3 domain-containing protein OS=Mus musculus OX=10090 GN=Cttn PE=2 SV=1; Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2; Cttn protein OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=1 1 3 3 0.5765 0 1 1 1 468.5744 1403.70865 1403.70764 0.72 0.00034 0/0 0 0 4585806.5 HCD 30 MS2 3.469483 144.3 110 25.2769 4126 4126 4125 QEplus033719.raw F4 227.3 92.4 154.5 146 125.3 120 134 4.25 1 FALSE 1.14E-05 1.99E-07 1.37 -250 2727 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AREEEEQR [K].aREEEEQR.[R] N-Term(TMT6plex) 5 A0A0G2JEX1 Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1 A0A0G2JEX1; Q7TPW1; A0A0G2JG59; A0A0G2JFD8; A0A0G2JGI1 Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=3; Nexilin (Fragment) OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1 1 2 2 0.3668 0 1 1 1 638.32922 1275.65117 1275.64906 1.66 0.00106 0/0 0 0 150100.2813 HCD 30 MS2 18.67012 6.9 110 25.2894 4131 4131 4125 QEplus033719.raw F4 19.3 4.4 3.9 6.5 7.2 153 1.99 1 FALSE 0.002421 0.04816 0.148 -250 2761 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGGSDGDHPER [K].eGGSDGDHPER.[E] N-Term(TMT6plex) 1 Q8BGC0 HIV Tat-specific factor 1 homolog OS=Mus musculus OX=10090 GN=Htatsf1 PE=1 SV=1 Q8BGC0 HIV Tat-specific factor 1 homolog OS=Mus musculus OX=10090 GN=Htatsf1 PE=1 SV=1 0 3 3 0.7842 0 1 1 1 462.21487 1384.63007 1384.62905 0.74 0.00034 0/0 0 0 464099.0938 HCD 30 MS2 26.03836 42.4 110 25.3143 4140 4140 4136 QEplus033719.raw F4 72.2 32.1 42 45.8 35.7 26.5 39 3.8 1 FALSE 1.14E-05 1.45E-10 1.966 -250 2766 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDDPASR [R].rDDPASR.[L] N-Term(TMT6plex) 1 Q60749 "KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Mus musculus OX=10090 GN=Khdrbs1 PE=1 SV=2" Q60749 "KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Mus musculus OX=10090 GN=Khdrbs1 PE=1 SV=2" 1 2 2 0.5124 0 1 1 1 523.28418 1045.56108 1045.55879 2.2 0.00115 0/0 0 0 341777.4063 HCD 30 MS2 0 20.9 110 25.3168 4141 4141 4136 QEplus033719.raw F4 40.3 12.5 23.3 12.5 19.1 18 191 2.01 1 FALSE 0.00198 0.03416 0.197 -250 2782 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEGRVEQSSQTR [K].hEGRVEQSSQTR.[K] N-Term(TMT6plex) 2 B2RRE7 OTU domain-containing protein 4 OS=Mus musculus OX=10090 GN=Otud4 PE=1 SV=1 B2RRE7; A0A0R4J260 OTU domain-containing protein 4 OS=Mus musculus OX=10090 GN=Otud4 PE=1 SV=1; Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Otud4 PE=1 SV=1 1 3 3 0.5215 0 1 1 1 548.28687 1642.84604 1642.84586 0.11 0.00006 0/0 0 0 190638.2656 HCD 30 MS2 0 9.1 110 25.3243 4144 4144 4136 QEplus033719.raw F4 9.8 7.1 8.2 6.8 16.7 5.8 219 1.63 1 FALSE 0.001658 0.0272 0.231 -250 2807 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRETAPR [R].nRETAPR.[T] N-Term(TMT6plex) 4 P28658 Ataxin-10 OS=Mus musculus OX=10090 GN=Atxn10 PE=1 SV=2 P28658; Q3TCF4; Q8BWX1; Q3TKP3 Ataxin-10 OS=Mus musculus OX=10090 GN=Atxn10 PE=1 SV=2; Ataxin-10 OS=Mus musculus OX=10090 GN=Atxn10 PE=2 SV=1; Atx10homo_assoc domain-containing protein OS=Mus musculus OX=10090 GN=Atxn10 PE=2 SV=1; Ataxin-10 OS=Mus musculus OX=10090 GN=Atxn10 PE=2 SV=1 1 3 3 0.366 0 1 1 1 358.20688 1072.60608 1072.60607 0.01 0 0/0 0 0 2148110.75 HCD 30 MS2 7.86247 110.3 110 25.3417 4150 4150 4147 QEplus033719.raw F4 247.7 61.9 109.4 91.4 58.2 93.4 163 2.65 1 FALSE 1.14E-05 0.0004891 0.724 -250 2818 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERAEQESAR [R].eRAEQESAR.[Q] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.4837 0 1 1 1 435.56384 1304.67698 1304.67561 1.05 0.00046 0/0 0 0 326694.0313 HCD 30 MS2 28.68414 44.8 110 25.3467 4152 4152 4147 QEplus033719.raw F4 93 25.8 42.1 39.3 25.8 42.9 220 3.68 2 FALSE 1.14E-05 3.35E-06 1.138 -250 2865 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGDQAGHGPR [R].dGDQAGHGPR.[H] N-Term(TMT6plex) 5 P06802 Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 OS=Mus musculus OX=10090 GN=Enpp1 PE=1 SV=4 P06802-2; P06802; G3X9S2; A0A0R4J1Q7; E9QQ26 Isoform 1 of Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 OS=Mus musculus OX=10090 GN=Enpp1; Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 OS=Mus musculus OX=10090 GN=Enpp1 PE=1 SV=4; Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 OS=Mus musculus OX=10090 GN=Enpp1 PE=1 SV=1; Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 OS=Mus musculus OX=10090 GN=Enpp1 PE=1 SV=1; Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 OS=Mus musculus OX=10090 GN=Enpp1 PE=1 SV=1 0 2 2 0.7107 0 1 1 1 619.8075 1238.60771 1238.60753 0.15 0.00009 0/0 0 0 89495.78906 HCD 30 MS2 0 12.8 110 25.3765 4163 4163 4158 QEplus033719.raw F4 20.6 8.3 16 11.3 9.8 10.5 101 1.97 1 FALSE 5.44E-05 0.002607 0.572 -250 2882 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERAEQESAR [R].eRAEQESAR.[Q] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.3902 0 1 1 1 652.84143 1304.67558 1304.67561 -0.02 -0.00001 0/0 0 0 268539.25 HCD 30 MS2 0 7.5 110 25.384 4166 4166 4158 QEplus033719.raw F4 14.4 4.6 9 7.9 3.8 5.5 209 2.05 2 FALSE 0.00198 0.03447 0.196 -250 2897 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVEQNHQR [R].gVEQNHQR.[A] N-Term(TMT6plex) 6 J3QJX3 Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=1 Q80YC0; J3QJX3; Q5DTL8; Q9Z2G6; Q3TT70; Q6GTY4 Sel1l protein (Fragment) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1; Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=1; MKIAA4137 protein (Fragment) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1; Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=2; Fibronectin type-II domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1; Sel-1 suppressor of lin-12-like (C. elegans) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1 0 3 3 0.6459 0 1 1 1 399.54941 1196.63367 1196.63335 0.27 0.00011 0/0 0 0 489388.0625 HCD 30 MS2 61.12701 40.4 110 25.4014 4172 4172 4169 QEplus033719.raw F4 82.3 25.1 45.7 28.7 27.4 33.1 199 3.53 1 FALSE 1.14E-05 0.0001257 0.838 -250 2913 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQAQTEDGHTDR [R].gQAQTEDGHTDR.[A] N-Term(TMT6plex) 1 Q9CYQ7 Nuclear prelamin A recognition factor OS=Mus musculus OX=10090 GN=Narf PE=2 SV=1 Q9CYQ7 Nuclear prelamin A recognition factor OS=Mus musculus OX=10090 GN=Narf PE=2 SV=1 0 3 3 0.8505 0 1 1 1 515.24854 1543.73105 1543.72983 0.79 0.00041 0/0 0 0 743212.6875 HCD 30 MS2 8.394084 12.7 110 25.4089 4175 4175 4169 QEplus033719.raw F4 17.6 7.8 13.2 15.1 9.4 13 61 4.75 1 FALSE 1.14E-05 2.55E-12 2.299 -250 2917 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECHDPSDR [R].ecHDPSDR.[L] N-Term(TMT6plex); C2(Carbamidomethyl) 6 A0PJE6 Pccb protein (Fragment) OS=Mus musculus OX=10090 GN=Pccb PE=2 SV=1 A0PJE6; Q7TMF4; Q8CFZ3; E9Q1J7; Q3UYS0; Q99MN9 "Pccb protein (Fragment) OS=Mus musculus OX=10090 GN=Pccb PE=2 SV=1; Propionyl Coenzyme A carboxylase, beta polypeptide OS=Mus musculus OX=10090 GN=Pccb PE=2 SV=1; Propionyl Coenzyme A carboxylase, beta polypeptide OS=Mus musculus OX=10090 GN=Pccb PE=2 SV=1; Propionyl-CoA carboxylase beta chain, mitochondrial OS=Mus musculus OX=10090 GN=Pccb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pccb PE=2 SV=1; Propionyl-CoA carboxylase beta chain, mitochondrial OS=Mus musculus OX=10090 GN=Pccb PE=1 SV=2" 0 3 3 0.796 0 1 1 1 415.52246 1244.55283 1244.55272 0.09 0.00004 0/0 0 0 313294.4063 HCD 30 MS2 6.832737 18.8 110 25.4114 4176 4176 4169 QEplus033719.raw F4 31.7 11.4 23.7 16 13.5 16.7 15 2.5 1 FALSE 0.0005848 0.008715 0.426 -250 2929 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQGHGPGSSSQAR [R].eQGHGPGSSSQAR.[Q] N-Term(TMT6plex) 3 Q5SF07 Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus OX=10090 GN=Igf2bp2 PE=1 SV=1 Q5SF07-2; Q5SF07; A6X8Z3 Isoform 2 of Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus OX=10090 GN=Igf2bp2; Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus OX=10090 GN=Igf2bp2 PE=1 SV=1; Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus OX=10090 GN=Igf2bp2 PE=1 SV=1 0 3 3 0.7943 0 1 1 1 509.58887 1526.75205 1526.7509 0.75 0.00038 0/0 0 0 120691.0703 HCD 30 MS2 22.73626 11.2 110 25.4164 4178 4178 4169 QEplus033719.raw F4 16.9 6.9 10.8 14.7 12.8 5.2 120 3.16 1 FALSE 1.14E-05 1.05E-08 1.613 -250 2942 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRESMGHR [K].dRESMGHR.[Y] N-Term(TMT6plex) 4 Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 J3QMT0; Q9Z2X1-2; J3QM80; Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=8; Isoform 2 of Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf; Heterogeneous nuclear ribonucleoprotein F (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 1 3 3 0.5323 0 1 1 1 406.20709 1216.60672 1216.60542 1.07 0.00043 0/0 0 0 3732601.5 HCD 30 MS2 27.54967 192.5 110 25.4342 4183 4183 4182 QEplus033719.raw F4 413.4 126.7 175.9 184.8 182.6 71.6 68 3.87 1 FALSE 1.14E-05 3.33E-06 1.138 -250 2946 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REEGNDRPVRR [R].rEEGNDRPVRR.[S] N-Term(TMT6plex) 5 A0A0A0MQ79 Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1 A0A0A0MQ79; S4R294; S4R2J9; Q3TLH4; Q3TLH4-5 Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=3; Isoform 5 of Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c 2 4 4 0.355 0 1 1 1 403.97662 1612.88466 1612.88291 1.08 0.00044 0/0 0 0 870470.8125 HCD 30 MS2 34.13604 38.2 110 25.4367 4184 4184 4182 QEplus033719.raw F4 42.2 32.1 38.3 42.1 39.1 35.5 354 2.62 1 FALSE 0.001231 0.01663 0.314 -250 2959 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRESMGHR [K].dRESMGHR.[Y] N-Term(TMT6plex) 4 Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 J3QMT0; Q9Z2X1-2; J3QM80; Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=8; Isoform 2 of Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf; Heterogeneous nuclear ribonucleoprotein F (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 1 2 2 0.3296 0 1 1 1 608.80701 1216.60674 1216.60542 1.08 0.00066 0/0 0 0 218503.7188 HCD 30 MS2 17.7413 11.4 110 25.4417 4186 4186 4182 QEplus033719.raw F4 27.6 10.4 7.2 10.5 8 4.7 68 1.79 1 FALSE 0.008337 0.1441 -0.08 -250 2977 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEASRQEEQQR [K].sEASRQEEQQR.[K] N-Term(TMT6plex) 4 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0; Q8C7E8 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 1 3 3 0.6388 0 1 1 1 526.2677 1576.78855 1576.78768 0.55 0.00029 0/0 0 0 124019.7188 HCD 30 MS2 0 28.5 110 25.4542 4191 4191 4182 QEplus033719.raw F4 29.5 24.4 26.9 22 41.1 26.9 158 2.99 1 FALSE 1.14E-05 1.02E-05 1.046 -250 2990 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTDDDRPPRR [R].hTDDDRPPRR.[G] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.55 0 1 1 1 498.59814 1493.77988 1493.77705 1.89 0.00094 0/0 0 0 73038.10938 HCD 30 MS2 23.36229 18.6 110 25.4666 4195 4195 4193 QEplus033719.raw F4 27.9 12.9 19.5 16.7 23.5 10.9 278 2.2 1 FALSE 0.001108 0.01433 0.341 -250 3023 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDERGEGRPR [K].eDERGEGRPR.[T] N-Term(TMT6plex) 4 A0A0A0MQE5 Calmodulin-regulated spectrin-associated protein 1 OS=Mus musculus OX=10090 GN=Camsap1 PE=1 SV=1 A2AHC3-2; A0A0A0MQE5; A2AHC3; A2AHC4 Isoform 2 of Calmodulin-regulated spectrin-associated protein 1 OS=Mus musculus OX=10090 GN=Camsap1; Calmodulin-regulated spectrin-associated protein 1 OS=Mus musculus OX=10090 GN=Camsap1 PE=1 SV=1; Calmodulin-regulated spectrin-associated protein 1 OS=Mus musculus OX=10090 GN=Camsap1 PE=1 SV=1; Calmodulin-regulated spectrin-associated protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Camsap1 PE=1 SV=1 1 3 3 0.593 0 1 1 1 477.25034 1429.73645 1429.73452 1.35 0.00064 0/0 0 0 191165.0156 HCD 30 MS2 0 22.8 110 25.4866 4203 4203 4193 QEplus033719.raw F4 28.2 13.9 20.3 18.6 32.3 23.7 178 2.58 1 FALSE 5.44E-05 0.001869 0.605 -250 3027 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGDQAGHGPR [R].dGDQAGHGPR.[H] N-Term(TMT6plex) 5 P06802 Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 OS=Mus musculus OX=10090 GN=Enpp1 PE=1 SV=4 P06802-2; P06802; G3X9S2; A0A0R4J1Q7; E9QQ26 Isoform 1 of Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 OS=Mus musculus OX=10090 GN=Enpp1; Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 OS=Mus musculus OX=10090 GN=Enpp1 PE=1 SV=4; Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 OS=Mus musculus OX=10090 GN=Enpp1 PE=1 SV=1; Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 OS=Mus musculus OX=10090 GN=Enpp1 PE=1 SV=1; Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 OS=Mus musculus OX=10090 GN=Enpp1 PE=1 SV=1 0 3 3 0.8 0 1 1 1 413.54095 1238.60831 1238.60753 0.63 0.00026 0/0 0 0 680197.4375 HCD 30 MS2 30.69296 37.3 110 25.494 4205 4205 4204 QEplus033719.raw F4 64.2 23.4 47.1 27.6 30.7 31 99 3.95 1 FALSE 1.14E-05 4.04E-07 1.312 -250 3033 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEREHVER [R].qEREHVER.[L] N-Term(TMT6plex) 12 J3QNM3 Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1 J3QNM3; Q03173-3; A0A0A6YW06; Q03173-4; Q03173; Q03173-6; A0A0A6YXC8; E9QKQ9; A0A0A6YVZ6; Q03173-5; E9QLZ9; E9QKR1 Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Isoform 2 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Isoform 3 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=2; Isoform 6 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Protein enabled homolog (Fragment) OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Isoform 4 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=2 1 3 3 0.4368 0 1 1 1 437.90399 1311.69742 1311.69668 0.57 0.00025 0/0 0 0 139804.8594 HCD 30 MS2 70.00079 32.2 110 25.4965 4206 4206 4204 QEplus033719.raw F4 49.6 20.6 40.4 26.4 28.4 27.8 240 1.74 1 FALSE 0.00219 0.04224 0.167 -250 3039 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NHEGHEDDGHIR [R].nHEGHEDDGHIR.[A] N-Term(TMT6plex) 4 Q9WUD1 E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1 Q9WUD1; Q3TYJ0; A0A494BBI6; A0A494BBF6 E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stub1 PE=2 SV=1; E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1; E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1 0 4 4 0.8578 0 1 1 1 411.94739 1644.76772 1644.76761 0.07 0.00003 0/0 0 0 1225673.75 HCD 30 MS2 15.78803 45.4 110 25.499 4207 4207 4204 QEplus033719.raw F4 65.2 34.4 43.3 29.9 65.3 34.3 49 6.96 1 FALSE 1.14E-05 7.27E-15 2.783 -250 3044 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDERGEGRPR [K].eDERGEGRPR.[T] N-Term(TMT6plex) 4 A0A0A0MQE5 Calmodulin-regulated spectrin-associated protein 1 OS=Mus musculus OX=10090 GN=Camsap1 PE=1 SV=1 A2AHC3-2; A0A0A0MQE5; A2AHC3; A2AHC4 Isoform 2 of Calmodulin-regulated spectrin-associated protein 1 OS=Mus musculus OX=10090 GN=Camsap1; Calmodulin-regulated spectrin-associated protein 1 OS=Mus musculus OX=10090 GN=Camsap1 PE=1 SV=1; Calmodulin-regulated spectrin-associated protein 1 OS=Mus musculus OX=10090 GN=Camsap1 PE=1 SV=1; Calmodulin-regulated spectrin-associated protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Camsap1 PE=1 SV=1 1 4 4 0.4309 0 1 1 1 358.18961 1429.73659 1429.73452 1.45 0.00052 0/0 0 0 631868.75 HCD 30 MS2 39.5918 72.7 110 25.5015 4208 4208 4204 QEplus033719.raw F4 102.8 49 74.8 66.8 81.3 61.5 178 2.46 1 FALSE 0.001429 0.0205 0.277 -250 3049 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NHEGHEDDGHIR [R].nHEGHEDDGHIR.[A] N-Term(TMT6plex) 4 Q9WUD1 E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1 Q9WUD1; Q3TYJ0; A0A494BBI6; A0A494BBF6 E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stub1 PE=2 SV=1; E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1; E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1 0 3 3 0.8391 0 1 1 1 548.92792 1644.7692 1644.76761 0.97 0.00053 0/0 0 0 453532.7813 HCD 30 MS2 16.4681 16 110 25.5039 4209 4209 4204 QEplus033719.raw F4 14.9 18.6 13.4 15.2 20 14.1 51 4.6 1 FALSE 1.14E-05 7.99E-14 2.585 -250 3061 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEREHVER [R].qEREHVER.[L] N-Term(TMT6plex) 12 J3QNM3 Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1 J3QNM3; Q03173-3; A0A0A6YW06; Q03173-4; Q03173; Q03173-6; A0A0A6YXC8; E9QKQ9; A0A0A6YVZ6; Q03173-5; E9QLZ9; E9QKR1 Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Isoform 2 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Isoform 3 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=2; Isoform 6 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Protein enabled homolog (Fragment) OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Isoform 4 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=2 1 3 3 0.3568 0 1 1 1 437.90399 1311.69742 1311.69668 0.57 0.00025 0/0 0 0 139804.8594 HCD 30 MS2 70.00079 32.2 110 25.5089 4211 4211 4204 QEplus033719.raw F4 49.6 20.6 40.4 26.4 28.4 27.8 240 1.99 1 FALSE 0.00562 0.09449 0.022 -250 3085 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSASTSDSTRR [R].tSASTSDSTRR.[V] N-Term(TMT6plex) 2 Q9CY34 NEDD8-conjugating enzyme UBE2F OS=Mus musculus OX=10090 GN=Ube2f PE=1 SV=1 Q9CY34; A0A087WQR9 NEDD8-conjugating enzyme UBE2F OS=Mus musculus OX=10090 GN=Ube2f PE=1 SV=1; NEDD8-conjugating enzyme UBE2F (Fragment) OS=Mus musculus OX=10090 GN=Ube2f PE=1 SV=1 1 3 3 0.512 0 1 1 1 466.57809 1397.71973 1397.7182 1.09 0.00051 0/0 0 0 712662.5 HCD 30 MS2 6.282246 49.3 110 25.5289 4218 4218 4215 QEplus033719.raw F4 99.1 33.2 60.4 41.2 30 31.9 200 3.32 1 FALSE 1.14E-05 3.40E-08 1.516 -250 3103 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSTSSQSQTSTASR [R].nSTSSQSQTSTASR.[K] N-Term(TMT6plex) 3 D3Z3F1 FIP1-like 1 protein (Fragment) OS=Mus musculus OX=10090 GN=Fip1l1 PE=1 SV=2 D3Z3F1; Q9D824-4; Q9D824 FIP1-like 1 protein (Fragment) OS=Mus musculus OX=10090 GN=Fip1l1 PE=1 SV=2; Isoform 4 of Pre-mRNA 3'-end-processing factor FIP1 OS=Mus musculus OX=10090 GN=Fip1l1; Pre-mRNA 3'-end-processing factor FIP1 OS=Mus musculus OX=10090 GN=Fip1l1 PE=1 SV=1 0 2 2 0.6456 0 1 1 1 835.91107 1670.81487 1670.81429 0.35 0.00029 0/0 0 0 204748.375 HCD 30 MS2 0 13.7 110 25.5364 4221 4221 4215 QEplus033719.raw F4 16.3 10.7 18.1 10.4 22 4.7 123 2.85 1 FALSE 1.14E-05 1.01E-07 1.426 -250 3112 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRIEGDHQ [K].rRIEGDHQ.[-] N-Term(TMT6plex) 3 Q9JHJ0 Tropomodulin-3 OS=Mus musculus OX=10090 GN=Tmod3 PE=1 SV=1 Q9JHJ0; Q3TFA9; Q8C3Z3 Tropomodulin-3 OS=Mus musculus OX=10090 GN=Tmod3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmod3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tmod3 PE=2 SV=1 2 3 3 0.665 0 1 1 1 413.89673 1239.67563 1239.67555 0.07 0.00003 0/0 0 0 955533.5 HCD 30 MS2 42.27973 40.4 110 25.5414 4223 4223 4215 QEplus033719.raw F4 70.9 32.9 42.4 29.1 41.2 26.1 278 2.06 1 FALSE 0.004483 0.08007 0.061 -250 3136 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEASRQEEQQR [K].sEASRQEEQQR.[K] N-Term(TMT6plex) 4 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0; Q8C7E8 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 1 2 2 0.4633 0 1 1 1 788.89801 1576.78874 1576.78768 0.68 0.00053 0/0 0 0 252120.8906 HCD 30 MS2 0 6.5 110 25.5562 4228 4228 4226 QEplus033719.raw F4 8.3 5.4 4.5 5.1 11.4 4.4 158 1.77 1 FALSE 0.004228 0.07753 0.068 -250 3169 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQPQHLHQGQHR [K].sQPQHLHQGQHR.[G] N-Term(TMT6plex) 3 Q91W18 Tudor domain-containing protein 3 OS=Mus musculus OX=10090 GN=Tdrd3 PE=1 SV=4 Q91W18; Q91W18-3; Q91W18-2 Tudor domain-containing protein 3 OS=Mus musculus OX=10090 GN=Tdrd3 PE=1 SV=4; Isoform 3 of Tudor domain-containing protein 3 OS=Mus musculus OX=10090 GN=Tdrd3; Isoform 2 of Tudor domain-containing protein 3 OS=Mus musculus OX=10090 GN=Tdrd3 0 3 3 0.5069 0 1 1 1 561.29956 1681.88413 1681.88325 0.52 0.00029 0/0 0 0 87433.80469 HCD 30 MS2 22.51967 6.5 110 25.5687 4233 4233 4226 QEplus033719.raw F4 8.8 6.8 4.4 4.4 11.4 3.2 306 2.88 1 FALSE 1.14E-05 5.19E-05 0.911 -250 3177 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDHQLR [K].rDHQLR.[L] N-Term(TMT6plex) 7 Q3UHE7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Kif21a PE=2 SV=1 Q3UHE7; E9Q0J5; F8WGN6; Q9QXL2-3; Q9QXL2-2; Q9QXL2; Q9QXL2-4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Kif21a PE=2 SV=1; Kinesin-like protein KIF21A OS=Mus musculus OX=10090 GN=Kif21a PE=1 SV=2; Kinesin-like protein KIF21A OS=Mus musculus OX=10090 GN=Kif21a PE=1 SV=1; Isoform 3 of Kinesin-like protein KIF21A OS=Mus musculus OX=10090 GN=Kif21a; Isoform 2 of Kinesin-like protein KIF21A OS=Mus musculus OX=10090 GN=Kif21a; Kinesin-like protein KIF21A OS=Mus musculus OX=10090 GN=Kif21a PE=1 SV=2; Isoform 4 of Kinesin-like protein KIF21A OS=Mus musculus OX=10090 GN=Kif21a 1 3 3 0.3519 0 1 1 1 351.87592 1053.61319 1053.61149 1.62 0.00057 0/0 0 0 194879.6875 HCD 30 MS2 54.9298 32.5 110 25.5737 4235 4235 4226 QEplus033719.raw F4 47.4 21.7 34.1 23.3 40.2 28.5 89 1.62 1 FALSE 0.003023 0.05912 0.116 -250 3186 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQDDTATATR [K].hQDDTATATR.[H] N-Term(TMT6plex) 2 Q8K1A6 Coiled-coil and C2 domain-containing protein 1A OS=Mus musculus OX=10090 GN=Cc2d1a PE=1 SV=2 Q8K1A6; E9PX94 Coiled-coil and C2 domain-containing protein 1A OS=Mus musculus OX=10090 GN=Cc2d1a PE=1 SV=2; Coiled-coil and C2 domain-containing protein 1A OS=Mus musculus OX=10090 GN=Cc2d1a PE=1 SV=2 0 2 2 0.5115 0 1 1 1 672.83984 1344.67241 1344.67052 1.4 0.00094 0/0 0 0 198022.875 HCD 30 MS2 18.88042 13.6 110 25.5837 4238 4238 4237 QEplus033719.raw F4 19.9 9.6 14.9 11.7 13.4 12.3 108 1.74 1 FALSE 0.0003408 0.006407 0.47 -250 3198 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQDDTATATR [K].hQDDTATATR.[H] N-Term(TMT6plex) 2 Q8K1A6 Coiled-coil and C2 domain-containing protein 1A OS=Mus musculus OX=10090 GN=Cc2d1a PE=1 SV=2 Q8K1A6; E9PX94 Coiled-coil and C2 domain-containing protein 1A OS=Mus musculus OX=10090 GN=Cc2d1a PE=1 SV=2; Coiled-coil and C2 domain-containing protein 1A OS=Mus musculus OX=10090 GN=Cc2d1a PE=1 SV=2 0 3 3 0.7706 0 1 1 1 448.89517 1344.67096 1344.67052 0.33 0.00015 0/0 0 0 1775615.75 HCD 30 MS2 24.60759 50.2 110 25.5886 4240 4240 4237 QEplus033719.raw F4 58.7 39.3 48.1 45.5 64.9 44.4 95 4.49 1 FALSE 1.14E-05 8.34E-09 1.632 -250 3203 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESEREEEQR [R].eSEREEEQR.[L] N-Term(TMT6plex) 5 F6W2Q5 Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1 F6W2Q5; P42567-2; P42567; H3BK65; A0A0R4J0A0 Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1; Isoform 2 of Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15; Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1; Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1; Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1 1 3 3 0.4866 0 1 1 1 474.23407 1420.68766 1420.68657 0.77 0.00036 0/0 0 0 886760.25 HCD 30 MS2 17.4371 55.4 110 25.5911 4241 4241 4237 QEplus033719.raw F4 72.5 48.9 53.6 56.5 54.8 46.3 83 3.35 1 FALSE 9.73E-05 0.002979 0.559 -250 3209 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHEEANAAR [K].aHEEANAAR.[K] N-Term(TMT6plex) 2 Q922U1 U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=1 SV=1 Q922U1; Q3UT19 U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=1 SV=1; Pre-mRNA-splicing factor 3 OS=Mus musculus OX=10090 GN=Prpf3 PE=2 SV=1 0 3 3 0.54 0 1 1 1 399.87723 1197.61713 1197.61736 -0.2 -0.00008 0/0 0 0 863002.625 HCD 30 MS2 37.12054 38.6 110 25.5936 4242 4242 4237 QEplus033719.raw F4 77.6 15.4 41.5 40.4 27.6 29.4 140 4.13 1 FALSE 1.14E-05 1.01E-06 1.237 -250 3219 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAHQVAR [R].sAHQVAR.[Y] N-Term(TMT6plex) 2 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm 0 2 2 0.5887 0 1 1 1 499.29114 997.575 997.57404 0.96 0.00048 0/0 0 0 663777.375 HCD 30 MS2 15.09938 78.8 110 25.5961 4243 4243 4237 QEplus033719.raw F4 290.5 40.1 39.2 52.3 30.4 20.2 88 2.48 2 FALSE 2.26E-05 0.001079 0.655 -250 3227 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPDDEQR [K].rPDDEQR.[Q] N-Term(TMT6plex) 7 E9QM90 RAB11-binding protein RELCH OS=Mus musculus OX=10090 GN=Relch PE=1 SV=2 E9QM90; A0A087WPW3; Q148V7-3; Q148V7; Q148V7-2; G3X9J4; A0A087WSS1 RAB11-binding protein RELCH OS=Mus musculus OX=10090 GN=Relch PE=1 SV=2; RAB11-binding protein RELCH (Fragment) OS=Mus musculus OX=10090 GN=Relch PE=1 SV=1; Isoform 3 of RAB11-binding protein RELCH OS=Mus musculus OX=10090 GN=Relch; RAB11-binding protein RELCH OS=Mus musculus OX=10090 GN=Relch PE=1 SV=1; Isoform 2 of RAB11-binding protein RELCH OS=Mus musculus OX=10090 GN=Relch; RAB11-binding protein RELCH OS=Mus musculus OX=10090 GN=Relch PE=1 SV=2; RAB11-binding protein RELCH OS=Mus musculus OX=10090 GN=Relch PE=1 SV=1 0 3 3 0.4555 0 1 1 1 382.20187 1144.59107 1144.59082 0.22 0.00008 0/0 0 0 487124.1875 HCD 30 MS2 23.3866 46.3 110 25.5986 4244 4244 4237 QEplus033719.raw F4 148.1 22.9 35.8 21.9 15.5 33.4 98 2.81 1 FALSE 0.001185 0.01608 0.32 -250 3232 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HHIEAQQR [K].hHIEAQQR.[L] N-Term(TMT6plex) 1 E9PZP8 HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1 OS=Mus musculus OX=10090 GN=Herc1 PE=1 SV=1 E9PZP8 HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1 OS=Mus musculus OX=10090 GN=Herc1 PE=1 SV=1 0 3 3 0.381 0 1 1 1 416.56497 1247.68036 1247.68063 -0.22 -0.00009 0/0 0 0 230232.7031 HCD 30 MS2 38.70156 24.1 110 25.6011 4245 4245 4237 QEplus033719.raw F4 43.7 14.4 23.5 20.9 19.4 22.7 320 2.52 1 FALSE 1.14E-05 0.0005916 0.708 -250 3261 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TREGNVR [K].tREGNVR.[V] N-Term(TMT6plex) 13 P29387; E9QKR0; Q3TQ70 Guanine nucleotide-binding protein subunit beta-4 OS=Mus musculus OX=10090 GN=Gnb4 PE=1 SV=4;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1;Beta1 subnuit of GTP-binding protein OS=Mus musculus OX=10090 GN=Gnb1 PE=1 SV=1 P29387; H3BKR2; D3Z1M1; E9QKR0; Q3TQ70; Q61621; Q3THF3; Q3TY18; Q3U1B1; D3Z1T4; E9PWM7; P62880; D3YZX3 Guanine nucleotide-binding protein subunit beta-4 OS=Mus musculus OX=10090 GN=Gnb4 PE=1 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (Fragment) OS=Mus musculus OX=10090 GN=Gnb1 PE=1 SV=8; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 (Fragment) OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1; Beta1 subnuit of GTP-binding protein OS=Mus musculus OX=10090 GN=Gnb1 PE=1 SV=1; G-protein beta subunit (Fragment) OS=Mus musculus OX=10090 GN=Gnb1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Gnb4 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Gnb4 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Gnb1 PE=2 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 (Fragment) OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=3; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1 1 3 3 0.3542 0 1 1 1 354.20709 1060.60672 1060.60607 0.61 0.00022 0/0 0 0 2411482.75 HCD 30 MS2 36.30672 134.8 110 25.619 4251 4251 4248 QEplus033719.raw F4 407.8 60.8 126.6 72.1 43 98.3 274 2.71 3 FALSE 0.0036 0.06898 0.09 -250 3280 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGRPEER [R].tGRPEER.[A] N-Term(TMT6plex) 2 Q60838 Segment polarity protein dishevelled homolog DVL-2 OS=Mus musculus OX=10090 GN=Dvl2 PE=1 SV=2 Q60838; I6L9H1 "Segment polarity protein dishevelled homolog DVL-2 OS=Mus musculus OX=10090 GN=Dvl2 PE=1 SV=2; Dishevelled 2, dsh homolog (Drosophila) OS=Mus musculus OX=10090 GN=Dvl2 PE=2 SV=1" 0 3 3 0.271 0 1 1 1 358.53491 1073.59018 1073.59009 0.09 0.00003 0/0 0 0 797480.25 HCD 30 MS2 79.64535 108.3 110 25.6264 4254 4254 4248 QEplus033719.raw F4 234 72 102.8 67.3 94.1 79.3 167 1.55 1 FALSE 0.005381 0.09192 0.029 -250 3285 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRGGGTEEASEGGR [R].gRGGGTEEASEGGR.[G] N-Term(TMT6plex) 3 Q3TT61 Uncharacterized protein OS=Mus musculus OX=10090 GN=Txlng PE=2 SV=1 Q3TT61; Q8BHN1-3; Q8BHN1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Txlng PE=2 SV=1; Isoform 3 of Gamma-taxilin OS=Mus musculus OX=10090 GN=Txlng; Gamma-taxilin OS=Mus musculus OX=10090 GN=Txlng PE=1 SV=1 1 3 3 0.6814 0 1 1 1 516.92407 1548.75766 1548.75638 0.83 0.00043 0/0 0 0 284737.6563 HCD 30 MS2 0 18.4 110 25.6289 4255 4255 4248 QEplus033719.raw F4 24 13.4 19.1 15.8 17.4 20.8 106 3.39 1 FALSE 1.14E-05 2.32E-06 1.168 -250 3298 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHEEANAAR [K].aHEEANAAR.[K] N-Term(TMT6plex) 2 Q922U1 U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=1 SV=1 Q922U1; Q3UT19 U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=1 SV=1; Pre-mRNA-splicing factor 3 OS=Mus musculus OX=10090 GN=Prpf3 PE=2 SV=1 0 2 2 0.6 0 1 1 1 599.31342 1197.61955 1197.61736 1.83 0.00109 0/0 0 0 158230.4219 HCD 30 MS2 0 11.7 110 25.634 4257 4257 4248 QEplus033719.raw F4 28.1 7.7 11.3 7 6 10.2 127 1.95 1 FALSE 0.0003312 0.006349 0.471 -250 3307 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTEAAAAQR [R].hTEAAAAQR.[E] N-Term(TMT6plex) 3 Q60668 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2 Q60668; Q3UXC8; Q60668-3 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=2 SV=1; Isoform 3 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd 0 3 3 0.66 0 1 1 1 395.21777 1183.63877 1183.6381 0.56 0.00022 0/0 0 0 2287975 HCD 30 MS2 1.84728 72.8 110 25.6364 4258 4258 4248 QEplus033719.raw F4 147.9 49.9 98.4 57.1 25.4 58.1 190 5.53 1 FALSE 1.14E-05 7.65E-09 1.639 -250 3316 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TREGNVR [K].tREGNVR.[V] N-Term(TMT6plex) 13 P29387; E9QKR0; Q3TQ70 Guanine nucleotide-binding protein subunit beta-4 OS=Mus musculus OX=10090 GN=Gnb4 PE=1 SV=4;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1;Beta1 subnuit of GTP-binding protein OS=Mus musculus OX=10090 GN=Gnb1 PE=1 SV=1 P29387; H3BKR2; D3Z1M1; E9QKR0; Q3TQ70; Q61621; Q3THF3; Q3TY18; Q3U1B1; D3Z1T4; E9PWM7; P62880; D3YZX3 Guanine nucleotide-binding protein subunit beta-4 OS=Mus musculus OX=10090 GN=Gnb4 PE=1 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (Fragment) OS=Mus musculus OX=10090 GN=Gnb1 PE=1 SV=8; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 (Fragment) OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1; Beta1 subnuit of GTP-binding protein OS=Mus musculus OX=10090 GN=Gnb1 PE=1 SV=1; G-protein beta subunit (Fragment) OS=Mus musculus OX=10090 GN=Gnb1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Gnb4 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Gnb4 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Gnb1 PE=2 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 (Fragment) OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=3; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1 1 2 2 0.2941 0 1 1 1 530.80737 1060.60747 1060.60607 1.32 0.0007 0/0 0 0 765069.8125 HCD 30 MS2 22.6601 30.9 110 25.6438 4260 4260 4259 QEplus033719.raw F4 94 14.1 24.5 14 10.9 28.1 294 1.7 3 FALSE 0.002578 0.05067 0.14 -250 3328 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTEAAAAQR [R].hTEAAAAQR.[E] N-Term(TMT6plex) 3 Q60668 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2 Q60668; Q3UXC8; Q60668-3 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=2 SV=1; Isoform 3 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd 0 3 3 0.6643 0 1 1 1 395.21796 1183.63932 1183.6381 1.03 0.00041 0/0 0 0 4906876 HCD 30 MS2 4.458086 87.3 110 25.6488 4262 4262 4259 QEplus033719.raw F4 180.9 51.7 108 74 42.1 67.4 189 5.54 1 FALSE 1.14E-05 1.32E-07 1.404 -250 3337 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDQDEEHCR [K].tDQDEEHcR.[K] N-Term(TMT6plex); C8(Carbamidomethyl) 3 Q9JKV1 Proteasomal ubiquitin receptor ADRM1 OS=Mus musculus OX=10090 GN=Adrm1 PE=1 SV=2 Q9JKV1; A0A0A6YVU8; A0A1S6GWG3 Proteasomal ubiquitin receptor ADRM1 OS=Mus musculus OX=10090 GN=Adrm1 PE=1 SV=2; Predicted pseudogene 9774 OS=Mus musculus OX=10090 GN=Gm9774 PE=3 SV=1; RPN13_C domain-containing protein OS=Mus musculus OX=10090 GN=Adrm1 PE=2 SV=1 0 3 3 0.8122 0 1 1 1 473.54453 1418.61902 1418.61677 1.59 0.00075 0/0 0 0 1948280.25 HCD 30 MS2 14.81821 84.5 110 25.6513 4263 4263 4259 QEplus033719.raw F4 115.2 70.3 93.6 97.3 61.4 69.4 13 4.9 1 FALSE 1.14E-05 1.03E-06 1.235 -250 3347 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERAEEQAR [K].eRAEEQAR.[K] N-Term(TMT6plex) 1 Q9JHS9 Spliceosome-associated protein CWC15 homolog OS=Mus musculus OX=10090 GN=Cwc15 PE=1 SV=1 Q9JHS9 Spliceosome-associated protein CWC15 homolog OS=Mus musculus OX=10090 GN=Cwc15 PE=1 SV=1 1 3 3 0.5017 0 1 1 1 406.55307 1217.64466 1217.64358 0.89 0.00036 0/0 0 0 1285916.25 HCD 30 MS2 51.44825 97.4 110 25.6563 4265 4265 4259 QEplus033719.raw F4 224.5 61.6 92 77.7 66.1 62.5 196 2.91 1 FALSE 0.0001707 0.003867 0.531 -250 3359 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTEAAAAQR [R].hTEAAAAQR.[E] N-Term(TMT6plex) 3 Q60668 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2 Q60668; Q3UXC8; Q60668-3 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=2 SV=1; Isoform 3 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd 0 2 2 0.6881 0 1 1 1 592.32349 1183.6397 1183.6381 1.35 0.0008 0/0 0 0 879218.375 HCD 30 MS2 0 67.8 110 25.6613 4267 4267 4259 QEplus033719.raw F4 153.5 38.2 72.2 55 28.4 59.7 186 3.11 1 FALSE 1.14E-05 1.31E-07 1.405 -250 3382 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERAEEQAR [K].eRAEEQAR.[K] N-Term(TMT6plex) 1 Q9JHS9 Spliceosome-associated protein CWC15 homolog OS=Mus musculus OX=10090 GN=Cwc15 PE=1 SV=1 Q9JHS9 Spliceosome-associated protein CWC15 homolog OS=Mus musculus OX=10090 GN=Cwc15 PE=1 SV=1 1 2 2 0.4384 0 1 1 1 609.32642 1217.64556 1217.64358 1.62 0.00099 0/0 0 0 251435.2813 HCD 30 MS2 19.68532 8.4 110 25.6737 4271 4271 4270 QEplus033719.raw F4 19.5 5.4 7.2 6.5 3.7 7.8 198 1.46 1 FALSE 0.002378 0.04733 0.15 -250 3394 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEVGSHGRDTR [R].qEVGSHGRDTR.[G] N-Term(TMT6plex) 4 Q8C483 Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1 Q8C483; P26638; Q3U6F6; A2AFS0 "Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1; Serine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Sars1 PE=1 SV=3; Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=2 SV=1; Seryl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1" 1 4 4 0.5909 0 1 1 1 368.44592 1470.76186 1470.76107 0.54 0.0002 0/0 0 0 889139.5625 HCD 30 MS2 33.13405 29.3 110 25.6811 4274 4274 4270 QEplus033719.raw F4 40.2 16.9 36.3 28.1 29.2 25 213 2.42 1 FALSE 1.14E-05 1.73E-05 1.002 -250 3400 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEETQERER [R].sEETQERER.[S] N-Term(TMT6plex) 7 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 3 3 0.5202 0 1 1 1 464.90073 1392.68763 1392.69165 -2.89 -0.00134 0/0 0 0 575055.0625 HCD 30 MS2 2.719618 85.4 110 25.6836 4275 4275 4270 QEplus033719.raw F4 131.9 74.8 87.8 68.3 92.5 57.3 130 3.21 1 FALSE 1.14E-05 9.77E-06 1.049 -250 3409 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RREEEMR [R].rREEEMR.[R] N-Term(TMT6plex) 6 Q3TMM5; Q3UM20 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1 Q3TMM5; Q3TTV7; Q3TFC2; Q3UM20; Q3TF40; Q99K48 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Non-POU domain-containing octamer-binding protein OS=Mus musculus OX=10090 GN=Nono PE=1 SV=3 2 2 2 0.2826 0 1 1 1 617.83032 1234.65337 1234.65237 0.81 0.0005 0/0 0 0 249249.5313 HCD 30 MS2 15.5629 5.4 110 25.6862 4276 4276 4270 QEplus033719.raw F4 7.6 3.7 4.3 4.7 7.1 5.1 225 2.3 2 FALSE 0.0001603 0.003564 0.54 -250 3417 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDQDEEHCR [K].tDQDEEHcR.[K] N-Term(TMT6plex); C8(Carbamidomethyl) 3 Q9JKV1 Proteasomal ubiquitin receptor ADRM1 OS=Mus musculus OX=10090 GN=Adrm1 PE=1 SV=2 Q9JKV1; A0A0A6YVU8; A0A1S6GWG3 Proteasomal ubiquitin receptor ADRM1 OS=Mus musculus OX=10090 GN=Adrm1 PE=1 SV=2; Predicted pseudogene 9774 OS=Mus musculus OX=10090 GN=Gm9774 PE=3 SV=1; RPN13_C domain-containing protein OS=Mus musculus OX=10090 GN=Adrm1 PE=2 SV=1 0 2 2 0.776 0 1 1 1 709.8125 1418.61772 1418.61677 0.67 0.00048 0/0 0 0 213648.3438 HCD 30 MS2 13.29655 27.6 110 25.6887 4277 4277 4270 QEplus033719.raw F4 30.8 24.7 31.4 35.7 18.9 24.3 13 3.66 1 FALSE 1.14E-05 1.11E-05 1.039 -250 3424 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGNSHSVER [K].dGNSHSVER.[Q] N-Term(TMT6plex) 1 Q3TVI8 Pre-B-cell leukemia transcription factor-interacting protein 1 OS=Mus musculus OX=10090 GN=Pbxip1 PE=1 SV=2 Q3TVI8 Pre-B-cell leukemia transcription factor-interacting protein 1 OS=Mus musculus OX=10090 GN=Pbxip1 PE=1 SV=2 0 2 2 0.4455 0 1 1 1 615.3075 1229.60771 1229.60719 0.42 0.00026 0/0 0 0 132479.6563 HCD 30 MS2 0 12.4 110 25.6912 4278 4278 4270 QEplus033719.raw F4 17 2.4 12.1 20.1 5.4 17.3 94 2.02 1 FALSE 0.001028 0.01348 0.352 -250 3434 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHEEAESGEGGR [K].eHEEAESGEGGR.[RL] N-Term(TMT6plex) 12 F6TQE2 Solute carrier family 12 member 4 (Fragment) OS=Mus musculus OX=10090 GN=Slc12a4 PE=1 SV=1 F6TQE2; Q3UDQ8; Q9JIS8; Q3TJG5; Q3TLV0; F8WIJ0; Q3U689; Q3TWV2; Q3U9N0; Q3TJM8; Q3TPD4; Q6NXV2 "Solute carrier family 12 member 4 (Fragment) OS=Mus musculus OX=10090 GN=Slc12a4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Solute carrier family 12 member 4 OS=Mus musculus OX=10090 GN=Slc12a4 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Solute carrier family 12 member 4 OS=Mus musculus OX=10090 GN=Slc12a4 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Solute carrier family 12, member 4 OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1" 0 3 3 0.8884 0 1 1 1 505.90152 1515.69001 1515.68729 1.79 0.0009 0/0 0 0 71376.13281 HCD 30 MS2 0 7.2 110 25.6962 4280 4280 4270 QEplus033719.raw F4 10.7 5.4 6 4.8 9 7.5 28 4.48 1 FALSE 1.14E-05 5.55E-09 1.666 -250 3443 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTDPDGPHSDR [K].rTDPDGPHSDR.[V] N-Term(TMT6plex) 2 Q80YA7 Dipeptidyl peptidase 8 OS=Mus musculus OX=10090 GN=Dpp8 PE=1 SV=1 Q80YA7; A0A1L1STG9 Dipeptidyl peptidase 8 OS=Mus musculus OX=10090 GN=Dpp8 PE=1 SV=1; Dipeptidyl peptidase 8 OS=Mus musculus OX=10090 GN=Dpp8 PE=1 SV=1 1 3 3 0.7295 0 1 1 1 494.58209 1481.73172 1481.72943 1.55 0.00076 0/0 0 0 531868.4375 HCD 30 MS2 15.18001 16.1 110 25.706 4283 4283 4281 QEplus033719.raw F4 20.8 8.8 16.5 19 16.8 14.6 122 2.81 1 FALSE 1.14E-05 3.70E-08 1.509 -250 3458 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQREESYSR [R].rQREESYSR.[M] N-Term(TMT6plex) 3 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q810V5; Q8VIJ6; Q7TMH7 "Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1; Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1" 2 3 3 0.6157 0 1 1 1 480.59009 1439.75571 1439.75525 0.32 0.00015 0/0 0 0 765541.5625 HCD 30 MS2 0 25.7 110 25.711 4285 4285 4281 QEplus033719.raw F4 21.5 32.1 28.7 13.8 40.6 17.5 246 2.29 1 FALSE 0.002173 0.0417 0.168 -250 3469 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEETQERER [R].sEETQERER.[S] N-Term(TMT6plex) 7 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 2 2 0.5602 0 1 1 1 696.8501 1392.69292 1392.69165 0.91 0.00063 0/0 0 0 205637.8594 HCD 30 MS2 0 11 110 25.716 4287 4287 4281 QEplus033719.raw F4 13.3 9.4 16.1 9.8 10.6 6.6 123 2.41 1 FALSE 0.001351 0.01917 0.288 -250 3477 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQNASDGNSGDAR [K].aQNASDGNSGDAR.[S] N-Term(TMT6plex) 1 Q8VIM9 Immunity-related GTPase family Q protein OS=Mus musculus OX=10090 GN=Irgq PE=1 SV=1 Q8VIM9 Immunity-related GTPase family Q protein OS=Mus musculus OX=10090 GN=Irgq PE=1 SV=1 0 2 2 0.7124 0 1 1 1 746.3537 1491.70012 1491.69853 1.07 0.0008 0/0 0 0 125662.5625 HCD 30 MS2 0 11.2 110 25.7185 4288 4288 4281 QEplus033719.raw F4 16.3 5.5 15.5 11.6 8.6 9.8 41 2.33 1 FALSE 1.14E-05 0.0004745 0.727 -250 3490 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDRRPDCR [R].cDRRPDcR.[D] N-Term(TMT6plex); C1(Carbamidomethyl); C7(Carbamidomethyl) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 1 3 3 0.4656 0 1 1 1 455.2225 1363.65296 1363.65205 0.66 0.0003 0/0 0 0 154424.5938 HCD 30 MS2 16.6624 19.4 110 25.7335 4293 4293 4292 QEplus033719.raw F4 34.1 12.4 19.6 13.5 20.5 16.2 62 1.31 2 FALSE 0.006267 0.1016 0.002 -250 3493 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEVGSHGR [R].qEVGSHGR.[D] N-Term(TMT6plex) 4 Q8C483 Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1 Q8C483; P26638; Q3U6F6; A2AFS0 "Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1; Serine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Sars1 PE=1 SV=3; Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=2 SV=1; Seryl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1" 0 3 3 0.6882 0 1 1 1 366.86676 1098.58573 1098.58534 0.36 0.00013 0/0 0 0 2679939.75 HCD 30 MS2 30.42993 94.2 110 25.7385 4295 4295 4292 QEplus033719.raw F4 198.3 53.8 93.9 87.9 53.3 78.1 132 4.17 1 FALSE 1.14E-05 2.22E-06 1.172 -250 3500 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQREESYSR [R].rQREESYSR.[M] N-Term(TMT6plex) 3 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q810V5; Q8VIJ6; Q7TMH7 "Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1; Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1" 2 4 4 0.5057 0 1 1 1 360.6944 1439.75576 1439.75525 0.35 0.00013 0/0 0 0 1773950.375 HCD 30 MS2 27.48537 57.7 110 25.741 4296 4296 4292 QEplus033719.raw F4 69.1 53.4 60.3 38.6 90.1 34.7 245 2.65 1 FALSE 1.14E-05 0.0002707 0.774 -250 3515 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQAQEQERR [R].aQAQEQERR.[E] N-Term(TMT6plex) 10 A2AEW0 Transcription factor E3 OS=Mus musculus OX=10090 GN=Tfe3 PE=1 SV=1 Q8K420; Q64092-2; A2AEW0; Q3U1L5; Q64092-3; Q64092-4; A2AEW2; Q64092; Q05BT8; A2AEW1 Transcription factor E3 (Fragment) OS=Mus musculus OX=10090 GN=Tfe3 PE=2 SV=1; Isoform 2 of Transcription factor E3 OS=Mus musculus OX=10090 GN=Tfe3; Transcription factor E3 OS=Mus musculus OX=10090 GN=Tfe3 PE=1 SV=1; BHLH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tfe3 PE=2 SV=1; Isoform 3 of Transcription factor E3 OS=Mus musculus OX=10090 GN=Tfe3; Isoform 4 of Transcription factor E3 OS=Mus musculus OX=10090 GN=Tfe3; Transcription factor E3 (Fragment) OS=Mus musculus OX=10090 GN=Tfe3 PE=4 SV=1; Transcription factor E3 OS=Mus musculus OX=10090 GN=Tfe3 PE=1 SV=2; Tcfe3 protein (Fragment) OS=Mus musculus OX=10090 GN=Tfe3 PE=2 SV=1; Transcription factor E3 OS=Mus musculus OX=10090 GN=Tfe3 PE=1 SV=1 1 3 3 0.6069 0 1 1 1 448.91113 1344.71885 1344.71814 0.52 0.00023 0/0 0 0 394555.5625 HCD 30 MS2 51.00481 44.5 110 25.7485 4299 4299 4292 QEplus033719.raw F4 95.4 30.8 44.1 31.4 28.5 36.6 258 3.79 1 FALSE 1.14E-05 1.46E-06 1.206 -250 3533 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEREEER [K].eAEREEER.[R] N-Term(TMT6plex) 2 B2RY56 RNA-binding protein 25 OS=Mus musculus OX=10090 GN=Rbm25 PE=1 SV=2 B2RY56; S4R2B0 RNA-binding protein 25 OS=Mus musculus OX=10090 GN=Rbm25 PE=1 SV=2; RNA-binding protein 25 (Fragment) OS=Mus musculus OX=10090 GN=Rbm25 PE=1 SV=1 1 3 3 0.3604 0 1 1 1 426.216 1276.63346 1276.63307 0.3 0.00013 0/0 0 0 1321898.125 HCD 30 MS2 20.49438 96.9 110 25.769 4306 4306 4303 QEplus033719.raw F4 213.2 73 94.6 77.2 47.8 75.4 129 2.22 1 FALSE 0.001744 0.02992 0.217 -250 3544 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESRPSEER [R].eSRPSEER.[E] N-Term(TMT6plex) 1 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 0 3 3 0.119 0 1 1 1 406.88028 1218.62629 1218.62759 -1.07 -0.00044 0/0 0 0 759437.3125 HCD 30 MS2 25.80924 115.7 110 25.7739 4308 4308 4303 QEplus033719.raw F4 162.2 82.3 106.3 129.4 112.1 101.8 153 2.94 1 FALSE 0.0001187 0.003125 0.554 -250 3554 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQAQEHEAER [R].qQAQEHEAER.[L] N-Term(TMT6plex) 4 Q91WG2 Rab GTPase-binding effector protein 2 OS=Mus musculus OX=10090 GN=Rabep2 PE=1 SV=3 Q91WG2-2; Q91WG2; Q3TZJ2; Q91WG2-1 Isoform 3 of Rab GTPase-binding effector protein 2 OS=Mus musculus OX=10090 GN=Rabep2; Rab GTPase-binding effector protein 2 OS=Mus musculus OX=10090 GN=Rabep2 PE=1 SV=3; Rab GTPase-binding effector protein 2 OS=Mus musculus OX=10090 GN=Rabep2 PE=2 SV=1; Isoform 2 of Rab GTPase-binding effector protein 2 OS=Mus musculus OX=10090 GN=Rabep2 0 3 3 0.7758 0 1 1 1 485.57828 1454.72028 1454.71853 1.2 0.00058 0/0 0 0 503002.2813 HCD 30 MS2 0 26.7 110 25.7789 4310 4310 4303 QEplus033719.raw F4 40.3 20.4 27.5 21.8 24 26 138 4.95 1 FALSE 1.14E-05 1.24E-09 1.789 -250 3559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSHDYGR [K].qSHDYGR.[I] N-Term(TMT6plex) 3 P47739 "Aldehyde dehydrogenase, dimeric NADP-preferring OS=Mus musculus OX=10090 GN=Aldh3a1 PE=1 SV=2" P47739; B7ZN13; Q3UNF5 "Aldehyde dehydrogenase, dimeric NADP-preferring OS=Mus musculus OX=10090 GN=Aldh3a1 PE=1 SV=2; Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a1 PE=2 SV=1; Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a1 PE=2 SV=1" 0 3 3 0.5364 0 1 1 1 364.51941 1091.54367 1091.54314 0.49 0.00018 0/0 0 0 477903.0938 HCD 30 MS2 16.91322 49 110 25.7814 4311 4311 4303 QEplus033719.raw F4 64.3 48 67.6 38.1 29.6 46.2 118 3.02 1 FALSE 1.14E-05 7.41E-05 0.882 -250 3564 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHEEAESGEGGR [K].eHEEAESGEGGR.[RL] N-Term(TMT6plex) 12 F6TQE2 Solute carrier family 12 member 4 (Fragment) OS=Mus musculus OX=10090 GN=Slc12a4 PE=1 SV=1 F6TQE2; Q3UDQ8; Q9JIS8; Q3TJG5; Q3TLV0; F8WIJ0; Q3U689; Q3TWV2; Q3U9N0; Q3TJM8; Q3TPD4; Q6NXV2 "Solute carrier family 12 member 4 (Fragment) OS=Mus musculus OX=10090 GN=Slc12a4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Solute carrier family 12 member 4 OS=Mus musculus OX=10090 GN=Slc12a4 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Solute carrier family 12 member 4 OS=Mus musculus OX=10090 GN=Slc12a4 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1; Solute carrier family 12, member 4 OS=Mus musculus OX=10090 GN=Slc12a4 PE=2 SV=1" 0 2 2 0.773 0 1 1 1 758.34802 1515.68877 1515.68729 0.97 0.00074 0/0 0 0 230006.4219 HCD 30 MS2 0 15.9 110 25.7839 4312 4312 4303 QEplus033719.raw F4 18 13.2 12.9 16.6 23.7 11.2 29 3.26 1 FALSE 1.14E-05 1.01E-07 1.426 -250 3570 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGPSGSSGER [K].qGPSGSSGER.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087; Q99LL6 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4; Col1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1 0 2 2 0.4685 0 1 1 1 595.80219 1190.59709 1190.59629 0.67 0.0004 0/0 0 0 214242.5625 HCD 30 MS2 0 33.5 110 25.7865 4313 4313 4303 QEplus033719.raw F4 49.5 23.9 42.4 37.2 17.9 29.9 127 2.54 1 FALSE 1.14E-05 5.22E-05 0.911 -250 3580 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERGSEDATER [K].eRGSEDATER.[E] N-Term(TMT6plex) 3 E9Q6J5 Biorientation of chromosomes in cell division protein 1-like 1 OS=Mus musculus OX=10090 GN=Bod1l PE=1 SV=1 E9Q6J5; E9Q6J5-3; E9Q6J5-2 Biorientation of chromosomes in cell division protein 1-like 1 OS=Mus musculus OX=10090 GN=Bod1l PE=1 SV=1; Isoform New of Biorientation of chromosomes in cell division protein 1-like 1 OS=Mus musculus OX=10090 GN=Bod1l; Isoform 2 of Biorientation of chromosomes in cell division protein 1-like 1 OS=Mus musculus OX=10090 GN=Bod1l 1 3 3 0.5366 0 1 1 1 460.2305 1378.67694 1378.676 0.68 0.00031 0/0 0 0 323297.3125 HCD 30 MS2 13.86676 24.9 110 25.7964 4316 4316 4314 QEplus033719.raw F4 34.8 14.8 26.2 21.9 29.3 22.5 98 2.87 1 FALSE 1.14E-05 1.65E-05 1.006 -250 3588 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEVGSHGR [R].qEVGSHGR.[D] N-Term(TMT6plex) 4 Q8C483 Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1 Q8C483; P26638; Q3U6F6; A2AFS0 "Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1; Serine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Sars1 PE=1 SV=3; Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=2 SV=1; Seryl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1" 0 2 2 0.6888 0 1 1 1 549.79675 1098.58623 1098.58534 0.81 0.00045 0/0 0 0 993924.75 HCD 30 MS2 27.22057 71.3 110 25.7989 4317 4317 4314 QEplus033719.raw F4 194.7 32.6 64.3 52.4 27.7 56.3 139 2.41 1 FALSE 1.14E-05 4.13E-05 0.93 -250 3594 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPPPHEHR [R].gPPPHEHR.[G] N-Term(TMT6plex) 4 Q80W00 Serine/threonine-protein phosphatase 1 regulatory subunit 10 OS=Mus musculus OX=10090 GN=Ppp1r10 PE=1 SV=1 Q99KB0; Q80W00; Q3ULI5; Q80W00-2 Ppp1r10 protein (Fragment) OS=Mus musculus OX=10090 GN=Ppp1r10 PE=2 SV=1; Serine/threonine-protein phosphatase 1 regulatory subunit 10 OS=Mus musculus OX=10090 GN=Ppp1r10 PE=1 SV=1; MHC class I region proline-rich protein CAT53 (Fragment) OS=Mus musculus OX=10090 GN=Ppp1r10 PE=2 SV=1; Isoform 2 of Serine/threonine-protein phosphatase 1 regulatory subunit 10 OS=Mus musculus OX=10090 GN=Ppp1r10 0 3 3 0.4637 0 1 1 1 385.87881 1155.62189 1155.62206 -0.14 -0.00006 0/0 0 0 873820.3125 HCD 30 MS2 45.02573 43.8 110 25.8013 4318 4318 4314 QEplus033719.raw F4 72.3 25.1 47.1 38.8 55.1 24.6 144 3.17 1 FALSE 1.14E-05 0.0002317 0.787 -250 3608 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETNCESDRER [K].eTNcESDRER.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 5 Q4JG03 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1 Q7TMY8-4; Q4JG03; Q7TMY8-3; Q7TMY8; A2AFQ0 Isoform 4 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; Isoform 3 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=5; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=1 1 3 3 0.7606 0 1 1 1 508.90219 1524.69202 1524.691 0.67 0.00034 0/0 0 0 397684.7188 HCD 30 MS2 7.883657 51.7 110 25.8088 4321 4321 4314 QEplus033719.raw F4 72.4 33.5 54.9 54.4 49.2 45.6 28 3.55 1 FALSE 1.14E-05 3.66E-09 1.7 -250 3612 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSHDYGR [K].qSHDYGR.[I] N-Term(TMT6plex) 3 P47739 "Aldehyde dehydrogenase, dimeric NADP-preferring OS=Mus musculus OX=10090 GN=Aldh3a1 PE=1 SV=2" P47739; B7ZN13; Q3UNF5 "Aldehyde dehydrogenase, dimeric NADP-preferring OS=Mus musculus OX=10090 GN=Aldh3a1 PE=1 SV=2; Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a1 PE=2 SV=1; Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a1 PE=2 SV=1" 0 2 2 0.4889 0 1 1 1 546.27472 1091.54216 1091.54314 -0.89 -0.00049 0/0 0 0 227883.4219 HCD 30 MS2 0 26.9 110 25.8113 4322 4322 4314 QEplus033719.raw F4 30.2 28.9 43.1 23.7 14.5 21.1 104 1.35 1 FALSE 0.007328 0.1175 -0.037 -250 3629 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEREEER [K].eAEREEER.[R] N-Term(TMT6plex) 2 B2RY56 RNA-binding protein 25 OS=Mus musculus OX=10090 GN=Rbm25 PE=1 SV=2 B2RY56; S4R2B0 RNA-binding protein 25 OS=Mus musculus OX=10090 GN=Rbm25 PE=1 SV=2; RNA-binding protein 25 (Fragment) OS=Mus musculus OX=10090 GN=Rbm25 PE=1 SV=1 1 2 2 0.1082 0 1 1 1 638.82019 1276.6331 1276.63307 0.02 0.00002 0/0 0 0 318286.0938 HCD 30 MS2 0 10.8 110 25.8163 4324 4324 4314 QEplus033719.raw F4 24.6 9.6 11 6.3 4.2 8.8 129 1.94 1 FALSE 0.003497 0.06754 0.094 -250 3669 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTASHTTATAR [R].nTASHTTATAR.[T] N-Term(TMT6plex) 2 B9EIV8 "Solute carrier family 12, member 7 OS=Mus musculus OX=10090 GN=Slc12a7 PE=2 SV=1" B9EIV8; Q9WVL3-2 "Solute carrier family 12, member 7 OS=Mus musculus OX=10090 GN=Slc12a7 PE=2 SV=1; Isoform 2 of Solute carrier family 12 member 7 OS=Mus musculus OX=10090 GN=Slc12a7" 0 3 3 0.6585 0 1 1 1 453.91092 1359.7182 1359.71781 0.29 0.00013 0/0 0 0 399299.3125 HCD 30 MS2 24.30586 30.5 110 25.8412 4333 4333 4325 QEplus033719.raw F4 51.3 19.1 31.5 24.7 36.2 20.2 259 3.66 1 FALSE 1.14E-05 9.24E-06 1.054 -250 3678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEEENRDR [K].eAEEENRDR.[I] N-Term(TMT6plex) 3 Q9DCA5 Ribosome biogenesis protein BRX1 homolog OS=Mus musculus OX=10090 GN=Brix1 PE=1 SV=3 F6QAG4; E9Q2V8; Q9DCA5 Ribosome biogenesis protein BRX1 homolog (Fragment) OS=Mus musculus OX=10090 GN=Brix1 PE=1 SV=1; Brix domain-containing protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Brix1 PE=1 SV=1; Ribosome biogenesis protein BRX1 homolog OS=Mus musculus OX=10090 GN=Brix1 PE=1 SV=3 1 3 3 0.6359 0 1 1 1 459.55853 1376.66104 1376.66035 0.5 0.00023 0/0 0 0 386328.0313 HCD 30 MS2 47.26735 57.1 110 25.8437 4334 4334 4325 QEplus033719.raw F4 92.1 42 68.6 44 48 48.2 75 3.57 1 FALSE 1.14E-05 0.0007749 0.685 -250 3685 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDPDGEHARR [K].eDPDGEHARR.[A] N-Term(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; A0A3Q4EH91; Q9D0E1-2; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 1 3 3 0.6505 0 1 1 1 470.90247 1410.69284 1410.69232 0.37 0.00017 0/0 0 0 271944.1875 HCD 30 MS2 0 52.2 110 25.8462 4335 4335 4325 QEplus033719.raw F4 75 40.2 57 43 53.8 44.1 104 3.09 1 FALSE 1.14E-05 2.77E-06 1.153 -250 3699 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQHEQLR [R].rQHEQLR.[A] N-Term(TMT6plex) 1 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 1 3 3 0.3114 0 1 1 1 399.2338 1195.68683 1195.68572 0.93 0.00037 0/0 0 0 1106387.125 HCD 30 MS2 54.49898 108.5 110 25.8591 4339 4339 4336 QEplus033719.raw F4 128.7 78 145.5 105.1 112.3 81.5 248 2.73 1 FALSE 0.001108 0.01449 0.339 -250 3707 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDPDGEHARR [K].eDPDGEHARR.[A] N-Term(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; A0A3Q4EH91; Q9D0E1-2; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 1 4 4 0.6473 0 1 1 1 353.4288 1410.69338 1410.69232 0.75 0.00026 0/0 0 0 871633.5625 HCD 30 MS2 44.52463 85.3 110 25.8616 4340 4340 4336 QEplus033719.raw F4 128.1 47.5 92.2 91.4 82.1 70.5 106 2.92 1 FALSE 1.14E-05 0.0001055 0.853 -250 3738 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRGGPEEGGR [R].dRGGPEEGGR.[G] N-Term(TMT6plex) 5 Q91W39 Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1 Q8BX12; Q69ZE0; Q91W39; B7ZC24; B7ZC23 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ncoa5 PE=2 SV=1; MKIAA1637 protein (Fragment) OS=Mus musculus OX=10090 GN=Ncoa5 PE=2 SV=1; Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1; Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1; Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1 1 2 2 0.6256 0 1 1 1 629.82159 1258.63591 1258.63374 1.72 0.00108 0/0 0 0 114933.6719 HCD 30 MS2 0 8.1 110 25.8741 4345 4345 4336 QEplus033719.raw F4 8.6 10.4 6.2 4.4 13 6.2 125 2.11 1 FALSE 0.001464 0.02119 0.271 -250 3756 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAVEHQR [K].nAVEHQR.[K] N-Term(TMT6plex) 33 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 3 3 0.74 0 1 1 1 361.53519 1082.59101 1082.59042 0.54 0.0002 0/0 0 0 1281748.625 HCD 30 MS2 44.78062 53.9 110 25.8914 4351 4351 4347 QEplus033719.raw F4 111 32.9 55.1 32.7 44.6 46.9 140 3 1 FALSE 5.44E-05 0.002245 0.587 -250 3810 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAVEHQR [K].nAVEHQR.[K] N-Term(TMT6plex) 33 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 2 2 0.6758 0 1 1 1 541.79907 1082.59087 1082.59042 0.41 0.00022 0/0 0 0 399831.5625 HCD 30 MS2 6.033815 37.9 110 25.9162 4360 4360 4358 QEplus033719.raw F4 101 15.2 33.7 31.5 11.9 33.9 140 2.56 1 FALSE 5.44E-05 0.002389 0.581 -250 3813 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRGGPEEGGR [R].dRGGPEEGGR.[G] N-Term(TMT6plex) 5 Q91W39 Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1 Q8BX12; Q69ZE0; Q91W39; B7ZC24; B7ZC23 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ncoa5 PE=2 SV=1; MKIAA1637 protein (Fragment) OS=Mus musculus OX=10090 GN=Ncoa5 PE=2 SV=1; Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1; Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1; Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1 1 3 3 0.6136 0 1 1 1 420.21622 1258.6341 1258.63374 0.28 0.00012 0/0 0 0 6333030.5 HCD 30 MS2 8.156343 195.2 110 25.9187 4361 4361 4358 QEplus033719.raw F4 233.1 174.4 192.4 144.5 261.7 165 126 3.83 1 FALSE 1.14E-05 2.21E-07 1.362 -250 3819 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEEDEGHSNSSPR [K].nEEDEGHSNSSPR.[H] N-Term(TMT6plex) 3 Q60668 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2 Q60668; Q3UXC8; Q60668-3 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=2 SV=1; Isoform 3 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd 0 3 3 0.865 0 1 1 1 562.92242 1686.75272 1686.75169 0.61 0.00034 0/0 0 0 728975.9375 HCD 30 MS2 4.355674 29.7 110 25.9212 4362 4362 4358 QEplus033719.raw F4 40.3 21.8 26.9 19.8 48.1 21.3 28 4.74 1 FALSE 1.14E-05 1.88E-12 2.325 -250 3825 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HNAHGAGNGLR [K].hNAHGAGNGLR.[Y] N-Term(TMT6plex) 6 Q99NF7 Protein-serine/threonine phosphatase OS=Mus musculus OX=10090 GN=Ppm1b PE=1 SV=1 Q99NF7; Q546R1; P36993-4; P36993-5; Q5BKS2; P36993-3 Protein-serine/threonine phosphatase OS=Mus musculus OX=10090 GN=Ppm1b PE=1 SV=1; Protein-serine/threonine phosphatase OS=Mus musculus OX=10090 GN=Ppm1b PE=2 SV=1; Isoform 3 of Protein phosphatase 1B OS=Mus musculus OX=10090 GN=Ppm1b; Isoform 4 of Protein phosphatase 1B OS=Mus musculus OX=10090 GN=Ppm1b; Protein-serine/threonine phosphatase OS=Mus musculus OX=10090 GN=Ppm1b PE=2 SV=1; Isoform 2 of Protein phosphatase 1B OS=Mus musculus OX=10090 GN=Ppm1b 0 3 3 0.6526 0 1 1 1 444.90805 1332.7096 1332.70825 1.02 0.00045 0/0 0 0 762465.8125 HCD 30 MS2 40.36863 49.1 110 25.9237 4363 4363 4358 QEplus033719.raw F4 79.8 24.4 52 58.7 36.8 43 257 4.03 1 FALSE 1.14E-05 2.98E-08 1.527 -250 3832 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENYSHHTQDDRR [R].eNYSHHTQDDRR.[D] N-Term(TMT6plex) 3 Q8BQ46 "TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1" Q3V452; Q8BQ46; Q3TLE4 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Taf15 PE=2 SV=1; TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Taf15 PE=2 SV=1" 1 4 4 0.7386 0 1 1 1 447.46646 1786.84401 1786.84184 1.22 0.00054 0/0 0 0 615794.5625 HCD 30 MS2 18.57107 33.1 110 25.9262 4364 4364 4358 QEplus033719.raw F4 30.6 36.8 23 43.6 51.6 13.1 71 4.82 1 FALSE 1.14E-05 1.52E-07 1.393 -250 3838 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETNCESDRER [K].eTNcESDRER.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 5 Q4JG03 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1 Q7TMY8-4; Q4JG03; Q7TMY8-3; Q7TMY8; A2AFQ0 Isoform 4 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; Isoform 3 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=5; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=1 1 2 2 0.6549 0 1 1 1 762.84943 1524.69158 1524.691 0.38 0.00029 0/0 0 0 240378.625 HCD 30 MS2 0 7.7 110 25.9287 4365 4365 4358 QEplus033719.raw F4 9.5 4.9 7.3 7.2 7.1 10.3 28 1.42 1 FALSE 0.004808 0.08393 0.051 -250 3856 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENYSHHTQDDRR [R].eNYSHHTQDDRR.[D] N-Term(TMT6plex) 3 Q8BQ46 "TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1" Q3V452; Q8BQ46; Q3TLE4 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Taf15 PE=2 SV=1; TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Taf15 PE=2 SV=1" 1 5 5 0.5963 0 1 1 1 358.17435 1786.84263 1786.84184 0.44 0.00016 0/0 0 0 615820.5 HCD 30 MS2 34.2393 32.8 110 25.9362 4368 4368 4358 QEplus033719.raw F4 45.3 31.2 22.1 35.5 45.5 16.9 69 3.27 1 FALSE 3.35E-05 0.001345 0.635 -250 3874 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVHQNHGER [R].vVHQNHGER.[N] N-Term(TMT6plex) 4 Q9WTI7-3 Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c Q9WTI7; Q9WTI7-3; Q9WTI7-2; Q9WTI7-4 Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c PE=1 SV=2; Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Isoform 2 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Isoform 4 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c 0 3 3 0.6441 0 1 1 1 435.57263 1304.70334 1304.7021 0.95 0.00042 0/0 0 0 2089153.625 HCD 30 MS2 10.32267 87.9 110 25.9491 4372 4372 4369 QEplus033719.raw F4 241.8 45.6 70.7 44.5 48 77.1 267 4.72 1 FALSE 1.14E-05 2.49E-09 1.732 -250 3921 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RREDEYR [R].rREDEYR.[F] N-Term(TMT6plex) 1 Q9JHS4 "ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial OS=Mus musculus OX=10090 GN=Clpx PE=1 SV=2" Q9JHS4 "ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial OS=Mus musculus OX=10090 GN=Clpx PE=1 SV=2" 2 2 2 0.278 0 1 1 1 626.8338 1252.66033 1252.65956 0.61 0.00038 0/0 0 0 191782.3594 HCD 30 MS2 0 7.1 110 25.9739 4381 4381 4380 QEplus033719.raw F4 9.8 3.7 7.8 6.7 8 6.5 187 2.05 1 FALSE 0.001584 0.02412 0.25 -250 3933 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TRGEAAEAR [K].tRGEAAEAR.[N] N-Term(TMT6plex) 1 Q059U9 A kinase (PRKA) anchor protein 8 OS=Mus musculus OX=10090 GN=Akap8 PE=1 SV=1 Q059U9 A kinase (PRKA) anchor protein 8 OS=Mus musculus OX=10090 GN=Akap8 PE=1 SV=1 1 3 3 0.3343 0 1 1 1 397.22131 1189.64939 1189.64866 0.61 0.00024 0/0 0 0 2600306.75 HCD 30 MS2 14.31553 129.9 110 25.9789 4383 4383 4380 QEplus033719.raw F4 284.5 74.8 128.2 103.9 78.6 109.5 247 3.59 1 FALSE 1.14E-05 6.29E-07 1.276 -250 3949 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQHDEQVR [R].sQHDEQVR.[L] N-Term(TMT6plex) 3 A0A0R4J0Q5 Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1 Q3V159; A0A0R4J0Q5; P21619 Uncharacterized protein OS=Mus musculus OX=10090 GN=Lmnb2 PE=2 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=2 0 3 3 0.6462 0 1 1 1 409.88104 1227.62857 1227.62793 0.53 0.00022 0/0 0 0 1561500 HCD 30 MS2 5.853714 59.2 110 25.9839 4385 4385 4380 QEplus033719.raw F4 110.1 27 50.9 91.2 42.2 33.6 132 3.59 1 FALSE 1.14E-05 1.74E-05 1.002 -250 3957 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGEHNGGR [K].vGEHNGGR.[D] N-Term(TMT6plex) 4 E9PXX7 Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=1 E9PXX7; Q3UBW8; Q91W90; A0A0R4J1Y7 Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Txndc5 PE=2 SV=1; Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=2; Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=1 0 3 3 0.7203 0 1 1 1 352.1918 1054.56086 1054.55912 1.64 0.00058 0/0 0 0 1339964.875 HCD 30 MS2 32.34657 101.3 110 25.9864 4386 4386 4380 QEplus033719.raw F4 249 46.1 94.6 58.9 61.3 97.7 124 3.54 1 FALSE 1.14E-05 0.0002898 0.768 -250 3963 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGGPADEER [K].hGGPADEER.[H] N-Term(TMT6plex) 1 P08228 Superoxide dismutase [Cu-Zn] OS=Mus musculus OX=10090 GN=Sod1 PE=1 SV=2 P08228 Superoxide dismutase [Cu-Zn] OS=Mus musculus OX=10090 GN=Sod1 PE=1 SV=2 0 3 3 0.7663 0 1 1 1 399.53345 1196.58579 1196.58573 0.05 0.00002 0/0 0 0 1123419.25 HCD 30 MS2 73.9679 135.4 110 25.9889 4387 4387 4380 QEplus033719.raw F4 197.8 94.1 145.9 122 148 104.5 96 3.68 1 FALSE 1.14E-05 1.76E-07 1.38 -250 3994 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNAEDTMR [R].sNAEDTmR.[S] N-Term(TMT6plex); M7(Oxidation) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.6196 0 1 1 1 584.77698 1168.54668 1168.54657 0.09 0.00006 0/0 0 0 350096.9688 HCD 30 MS2 0 14.2 110 26.0062 4393 4393 4391 QEplus033719.raw F4 15.1 10.5 18.1 13 16.3 12.1 35 1.63 2 FALSE 0.002064 0.03772 0.183 -250 4030 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEEDEGHSNSSPR [K].nEEDEGHSNSSPR.[H] N-Term(TMT6plex) 3 Q60668 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2 Q60668; Q3UXC8; Q60668-3 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=2 SV=1; Isoform 3 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd 0 2 2 0.9783 0 1 1 1 843.88153 1686.75578 1686.75169 2.43 0.00205 0/0 0 0 131022.4219 HCD 30 MS2 0 13.2 110 26.0237 4400 4400 4391 QEplus033719.raw F4 15.3 11.7 12.6 10.1 24 5.4 30 1.84 1 FALSE 0.004122 0.07587 0.072 -250 4038 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMDDDRGPR [R].gmDDDRGPR.[R] N-Term(TMT6plex); M2(Oxidation) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.629 0 1 1 1 421.86993 1263.59525 1263.59491 0.26 0.00011 0/0 0 0 1155044.875 HCD 30 MS2 58.64531 103.7 110 26.034 4403 4403 4402 QEplus033719.raw F4 131.7 83.5 107.9 78.7 132.1 88.4 55 1.86 1 FALSE 0.001903 0.03247 0.205 -250 4045 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQASQSTQAHENNR [R].tQASQSTQAHENNR.[D] N-Term(TMT6plex) 4 E9PYU1 Coronin OS=Mus musculus OX=10090 GN=Coro7 PE=1 SV=1 E9PYU1; G3X9L5; Q9D2V7; Q8CA54 Coronin OS=Mus musculus OX=10090 GN=Coro7 PE=1 SV=1; Coronin OS=Mus musculus OX=10090 GN=Coro7 PE=1 SV=1; Coronin-7 OS=Mus musculus OX=10090 GN=Coro7 PE=1 SV=2; Coronin OS=Mus musculus OX=10090 GN=Coro7 PE=2 SV=1 0 3 3 0.6329 0 1 1 1 600.96503 1800.88053 1800.87862 1.06 0.00064 0/0 0 0 264167.2813 HCD 30 MS2 42.81747 8.1 110 26.0365 4404 4404 4402 QEplus033719.raw F4 10 9.3 6.7 9.7 8.7 4.4 143 3.46 1 FALSE 1.14E-05 7.47E-09 1.641 -250 4052 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGGPADEER [K].hGGPADEER.[H] N-Term(TMT6plex) 1 P08228 Superoxide dismutase [Cu-Zn] OS=Mus musculus OX=10090 GN=Sod1 PE=1 SV=2 P08228 Superoxide dismutase [Cu-Zn] OS=Mus musculus OX=10090 GN=Sod1 PE=1 SV=2 0 2 2 0.6792 0 1 1 1 598.79694 1196.5866 1196.58573 0.72 0.00043 0/0 0 0 1865719.75 HCD 30 MS2 2.35868 155.9 110 26.039 4405 4405 4402 QEplus033719.raw F4 212.2 123.8 167.7 137.8 166.8 127.2 86 3.46 1 FALSE 3.35E-05 0.00128 0.64 -250 4057 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRETMGHR [K].dRETMGHR.[Y] N-Term(TMT6plex) 4 Q8C2Q7; P70333 Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus OX=10090 GN=Hnrnph1 PE=1 SV=1;Heterogeneous nuclear ribonucleoprotein H2 OS=Mus musculus OX=10090 GN=Hnrnph2 PE=1 SV=1 Q8C2Q7; P70333; O35737; Q3UR26 Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus OX=10090 GN=Hnrnph1 PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein H2 OS=Mus musculus OX=10090 GN=Hnrnph2 PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus OX=10090 GN=Hnrnph1 PE=1 SV=3; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnph2 PE=2 SV=1 1 2 2 0.5085 0 1 1 1 615.81451 1230.62175 1230.62107 0.55 0.00034 0/0 0 0 1184044.125 HCD 30 MS2 22.03139 37.7 110 26.0415 4406 4406 4402 QEplus033719.raw F4 57.2 32 38.7 39.3 34.9 24.2 83 2.36 2 FALSE 5.44E-05 0.002631 0.572 -250 4060 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRDYSGR [R].sRDYSGR.[S] N-Term(TMT6plex) 1 Q8BG13 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 Q8BG13 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 1 2 2 0.5176 0 1 1 1 535.2832 1069.55913 1069.55879 0.32 0.00017 0/0 0 0 559160.625 HCD 30 MS2 0 30.9 110 26.044 4407 4407 4402 QEplus033719.raw F4 48.4 28.7 33.2 24.7 27.3 22.8 94 1.7 1 FALSE 0.002603 0.05152 0.138 -250 4068 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHPEEASER [R].qHPEEASER.[G] N-Term(TMT6plex) 4 P39447 Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=2 Q91YW2; P39447; B9EHJ3; A0A0U1RPW2 Tjp1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tjp1 PE=2 SV=1; Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=2; Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=1; Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=1 0 3 3 0.5906 0 1 1 1 437.88821 1311.65009 1311.64906 0.79 0.00034 0/0 0 0 474421.5313 HCD 30 MS2 79.36464 83.2 110 26.0465 4408 4408 4402 QEplus033719.raw F4 124.3 58.4 100 67.9 85.7 62.8 133 2.54 1 FALSE 0.0007816 0.01078 0.392 -250 4114 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRDYSGR [R].sRDYSGR.[S] N-Term(TMT6plex) 1 Q8BG13 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 Q8BG13 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 1 3 3 0.6063 0 1 1 1 357.19131 1069.55939 1069.55879 0.56 0.0002 0/0 0 0 9223907 HCD 30 MS2 4.961786 305.3 110 26.0689 4416 4416 4413 QEplus033719.raw F4 513.2 265.9 367.7 192.4 280.6 212.1 104 2.21 1 FALSE 0.003397 0.06562 0.099 -250 4133 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPNTTDGR [K].rPNTTDGR.[T] N-Term(TMT6plex) 2 Q8N7N5 DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8 PE=1 SV=1 Q8N7N5-2; Q8N7N5 Isoform 2 of DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8; DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8 PE=1 SV=1 0 3 3 0.4874 0 1 1 1 382.54568 1145.6225 1145.62245 0.04 0.00002 0/0 0 0 1300745.625 HCD 30 MS2 45.04927 159.6 110 26.0739 4418 4418 4413 QEplus033719.raw F4 688.5 53.7 80.5 50.4 27.6 56.9 213 2.38 1 FALSE 0.001222 0.01651 0.315 -250 4171 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMDDDRGPR [R].gmDDDRGPR.[R] N-Term(TMT6plex); M2(Oxidation) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.6307 0 1 1 1 421.86987 1263.59507 1263.59491 0.12 0.00005 0/0 0 0 1470231.75 HCD 30 MS2 55.75133 95.1 110 26.0863 4423 4423 4413 QEplus033719.raw F4 117.3 75.9 101 71.9 119 85.7 55 1.76 1 FALSE 0.001092 0.01413 0.344 -250 4180 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESQGGATSTEGRR [R].eSQGGATSTEGRR.[D] N-Term(TMT6plex) 2 Q8R1X6 Spartin OS=Mus musculus OX=10090 GN=Spart PE=1 SV=1 Q8R1X6-2; Q8R1X6 Isoform 2 of Spartin OS=Mus musculus OX=10090 GN=Spart; Spartin OS=Mus musculus OX=10090 GN=Spart PE=1 SV=1 1 3 3 0.7213 0 1 1 1 522.26782 1564.78891 1564.78768 0.79 0.00041 0/0 0 0 5012154.5 HCD 30 MS2 2.406418 114.7 110 26.0992 4427 4427 4424 QEplus033719.raw F4 142.3 79.9 116.3 86.8 155.3 107.8 182 5.92 1 FALSE 1.14E-05 6.31E-16 3.176 -250 4203 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ACCHPENNQR [R].accHPENNQR.[R] N-Term(TMT6plex); C2(Carbamidomethyl); C3(Carbamidomethyl) 1 Q3TDN0 Protein dispatched homolog 1 OS=Mus musculus OX=10090 GN=Disp1 PE=1 SV=2 Q3TDN0 Protein dispatched homolog 1 OS=Mus musculus OX=10090 GN=Disp1 PE=1 SV=2 0 3 3 0.8007 0 1 1 1 505.56442 1514.67871 1514.679 -0.19 -0.00009 0/0 0 0 304868.625 HCD 30 MS2 0 15.8 110 26.1067 4430 4430 4424 QEplus033719.raw F4 18.5 12.5 19.9 15.7 15.3 12.6 23 2.91 1 FALSE 0.0005076 0.008 0.439 -250 4209 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRDPEGDR [R].dRDPEGDR.[A] N-Term(TMT6plex) 1 Q7TSH3 Zinc finger protein 516 OS=Mus musculus OX=10090 GN=Znf516 PE=1 SV=1 Q7TSH3 Zinc finger protein 516 OS=Mus musculus OX=10090 GN=Znf516 PE=1 SV=1 1 3 3 0.5495 0 1 1 1 396.86545 1188.58179 1188.58064 0.96 0.00038 0/0 0 0 903453.1875 HCD 30 MS2 38.71222 70.7 110 26.1092 4431 4431 4424 QEplus033719.raw F4 114.7 57.8 71 60.6 66.4 53.9 53 2.22 1 FALSE 0.0005556 0.008309 0.433 -250 4216 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHEPGQAAGR [R].gHEPGQAAGR.[S] N-Term(TMT6plex) 3 Q9ESJ0 Exportin-4 OS=Mus musculus OX=10090 GN=Xpo4 PE=1 SV=2 Q9ESJ0; A0A0R4J254; Q8C976 Exportin-4 OS=Mus musculus OX=10090 GN=Xpo4 PE=1 SV=2; Exportin-4 OS=Mus musculus OX=10090 GN=Xpo4 PE=1 SV=1; CRM1_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Xpo4 PE=2 SV=1 0 3 3 0.732 0 1 1 1 403.54929 1208.6333 1208.63335 -0.04 -0.00001 0/0 0 0 658117.3125 HCD 30 MS2 27.79875 37.3 110 26.1116 4432 4432 4424 QEplus033719.raw F4 56.6 22.3 32.5 37.2 44.7 30.7 198 4.03 1 FALSE 1.14E-05 7.20E-07 1.264 -250 4228 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHPEEASER [R].qHPEEASER.[G] N-Term(TMT6plex) 4 P39447 Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=2 Q91YW2; P39447; B9EHJ3; A0A0U1RPW2 Tjp1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tjp1 PE=2 SV=1; Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=2; Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=1; Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=1 0 2 2 0.6531 0 1 1 1 656.32745 1311.64763 1311.64906 -1.09 -0.00071 0/0 0 0 467904 HCD 30 MS2 11.3343 33.6 110 26.1167 4434 4434 4424 QEplus033719.raw F4 38.4 27.9 48.7 37.7 25.9 23.1 132 2.71 1 FALSE 1.14E-05 1.31E-05 1.025 -250 4248 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NADDDRGPR [R].nADDDRGPR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.6923 0 1 1 1 415.54349 1244.61591 1244.61809 -1.75 -0.00073 0/0 0 0 373022.9063 HCD 30 MS2 46.02754 70.2 110 26.134 4440 4440 4435 QEplus033719.raw F4 82.1 46.6 89.5 68.1 75.5 59.7 96 2.47 1 FALSE 1.14E-05 0.0007288 0.69 -250 4251 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRQVGSGGDGER [K].gRQVGSGGDGER.[W] N-Term(TMT6plex) 9 Q5CZX6 Acyl-CoA-binding domain-containing protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Acbd5 PE=2 SV=1 Q5XG73-3; Q5CZX6; Q5XG73; A0A2I3BQH8; Z4YM84; A0A2I3BRB9; Q5XG73-2; E9QNH7; A0A2I3BQ50 Isoform 3 of Acyl-CoA-binding domain-containing protein 5 OS=Mus musculus OX=10090 GN=Acbd5; Acyl-CoA-binding domain-containing protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Acbd5 PE=2 SV=1; Acyl-CoA-binding domain-containing protein 5 OS=Mus musculus OX=10090 GN=Acbd5 PE=1 SV=1; Acyl-CoA-binding domain-containing protein 5 OS=Mus musculus OX=10090 GN=Acbd5 PE=1 SV=1; Acyl-CoA-binding domain-containing protein 5 OS=Mus musculus OX=10090 GN=Acbd5 PE=1 SV=2; Acyl-CoA-binding domain-containing protein 5 OS=Mus musculus OX=10090 GN=Acbd5 PE=1 SV=1; Isoform 2 of Acyl-CoA-binding domain-containing protein 5 OS=Mus musculus OX=10090 GN=Acbd5; Acyl-CoA-binding domain-containing protein 5 OS=Mus musculus OX=10090 GN=Acbd5 PE=1 SV=1; Acyl-CoA-binding domain-containing protein 5 OS=Mus musculus OX=10090 GN=Acbd5 PE=1 SV=1 1 3 3 0.6239 0 1 1 1 468.57779 1403.71881 1403.71887 -0.04 -0.00002 0/0 0 0 320186.4063 HCD 30 MS2 15.78335 53.8 110 26.1365 4441 4441 4435 QEplus033719.raw F4 67.5 36.5 62.2 54.3 63 39.4 176 3.43 1 FALSE 1.14E-05 0.0001883 0.804 -250 4258 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGEAAASHR [R].eGEAAASHR.[Q] N-Term(TMT6plex) 2 Q3UVK0 Endoplasmic reticulum metallopeptidase 1 OS=Mus musculus OX=10090 GN=Ermp1 PE=1 SV=2 Q3UVK0; Q3UVK0-2 Endoplasmic reticulum metallopeptidase 1 OS=Mus musculus OX=10090 GN=Ermp1 PE=1 SV=2; Isoform 2 of Endoplasmic reticulum metallopeptidase 1 OS=Mus musculus OX=10090 GN=Ermp1 0 3 3 0.6776 0 1 1 1 386.20212 1156.5918 1156.59082 0.85 0.00033 0/0 0 0 993796.5 HCD 30 MS2 51.59873 78.4 110 26.139 4442 4442 4435 QEplus033719.raw F4 142 53.8 74.8 40.6 107.9 51.2 110 3.35 1 FALSE 1.14E-05 1.41E-06 1.209 -250 4266 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEHIER [K].hEHIER.[R] N-Term(TMT6plex) 2 B2RTN5 Glucocorticoid receptor DNA binding factor 1 OS=Mus musculus OX=10090 GN=Arhgap35 PE=1 SV=1 B2RTN5; Q3TSU7 Glucocorticoid receptor DNA binding factor 1 OS=Mus musculus OX=10090 GN=Arhgap35 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Arhgap35 PE=2 SV=1 0 3 3 0.2763 0 1 1 1 350.52795 1049.56931 1049.56896 0.33 0.00012 0/0 0 0 372426.5 HCD 30 MS2 38.77164 49.7 110 26.144 4444 4444 4435 QEplus033719.raw F4 82.7 33.5 41.9 40.6 62.7 37.1 302 2.57 1 FALSE 0.0007816 0.01085 0.391 -250 4290 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STGSSDRPSAR [R].sTGSSDRPSAR.[R] N-Term(TMT6plex) 2 A0A0R4J0T8 ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Arfgap3 PE=1 SV=1 A0A0R4J0T8; Q9D8S3 ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Arfgap3 PE=1 SV=1; ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Arfgap3 PE=1 SV=2 0 2 2 0.5 0 1 1 1 675.35254 1349.6978 1349.69707 0.54 0.00037 0/0 0 0 575737.75 HCD 30 MS2 0 17.8 110 26.1564 4448 4448 4446 QEplus033719.raw F4 22.8 10.2 17 17.4 21.1 18.1 222 1.6 1 FALSE 0.00714 0.1123 -0.025 -250 4297 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STGSSDRPSAR [R].sTGSSDRPSAR.[R] N-Term(TMT6plex) 2 A0A0R4J0T8 ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Arfgap3 PE=1 SV=1 A0A0R4J0T8; Q9D8S3 ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Arfgap3 PE=1 SV=1; ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Arfgap3 PE=1 SV=2 0 3 3 0.6462 0 1 1 1 450.57071 1349.69757 1349.69707 0.37 0.00017 0/0 0 0 9952440 HCD 30 MS2 6.439722 360 110 26.1588 4449 4449 4446 QEplus033719.raw F4 451.8 257.7 376.9 367.1 418.7 287.7 222 3.25 1 FALSE 1.14E-05 2.26E-07 1.36 -250 4305 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGPEHAAR [R].dGPEHAAR.[L] N-Term(TMT6plex) 3 E9Q967 Segment polarity protein dishevelled homolog DVL-3 OS=Mus musculus OX=10090 GN=Dvl3 PE=1 SV=1 E9Q967; Q61062; E9Q150 Segment polarity protein dishevelled homolog DVL-3 OS=Mus musculus OX=10090 GN=Dvl3 PE=1 SV=1; Segment polarity protein dishevelled homolog DVL-3 OS=Mus musculus OX=10090 GN=Dvl3 PE=1 SV=2; Segment polarity protein dishevelled homolog DVL-3 OS=Mus musculus OX=10090 GN=Dvl3 PE=1 SV=1 0 3 3 0.0656 0 1 1 1 361.19116 1081.55893 1081.55879 0.14 0.00005 0/0 0 0 1475094.375 HCD 30 MS2 74.28745 91.7 110 26.1613 4450 4450 4446 QEplus033719.raw F4 167.8 65.5 95 68.7 79.3 73.6 118 2.59 1 FALSE 0.0008183 0.01131 0.384 -250 4314 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AADESER [K].aADESER.[GW] N-Term(TMT6plex) 36 E9Q456; G5E8R2; G5E8R1; P58774; Q8C7C3; A2AIM4; Q58E70; P58774-2; E9Q5J9; A0A0R4J1P2; E9Q450; Q6IRU2 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 E9Q456; Q9D1R6; E9Q455; G5E8R2; E9Q453; Q91VH3; G5E8R1; Q8BSH3; D3Z6I8; E9Q452; P58774; F8WID5; S4R2U0; Q8C7C3; A2AIM4; Q3TJ53; Q58E70; D3Z2H9; Q3SX28; P58774-2; E9Q454; Q61344; E9Q5J9; A0A0R4J1P2; E9Q448; P21107; E9Q450; Q8K0Z5; G5E8R0; Q564G1; B7ZNL3; Q8BP43; Q6IRU2; E9Q7Q3; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin 3, related sequence 7 OS=Mus musculus OX=10090 GN=Tpm3-rs7 PE=3 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=3; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 3, gamma OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 0 2 2 0.32 0 1 1 1 503.75427 1006.50127 1006.50027 0.99 0.0005 0/0 0 0 947602.25 HCD 30 MS2 4.654796 84.7 110 26.1638 4451 4451 4446 QEplus033719.raw F4 198.5 33.3 83.2 35.4 35.6 122.5 75 2.5 12 TRUE 4.43E-05 0.001671 0.615 -250 4331 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQDVATR [R].hQDVATR.[S] N-Term(TMT6plex) 2 Q80X73 Protein pelota homolog OS=Mus musculus OX=10090 GN=Pelo PE=1 SV=3 Q80X73; Q3THL5 Protein pelota homolog OS=Mus musculus OX=10090 GN=Pelo PE=1 SV=3; Protein pelota homolog OS=Mus musculus OX=10090 GN=Pelo PE=2 SV=1 0 3 3 0.3714 0 1 1 1 352.5314 1055.57965 1055.57952 0.13 0.00004 0/0 0 0 838195.9375 HCD 30 MS2 38.1682 59.4 110 26.1713 4454 4454 4446 QEplus033719.raw F4 101.2 37 67.1 54.1 44.6 52.4 124 3.15 1 FALSE 5.44E-05 0.002623 0.572 -250 4360 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGAGGGPGGSGGGSSQR [R].gGAGGGPGGSGGGSSQR.[G] N-Term(TMT6plex) 3 Q3TAB8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pacs1 PE=2 SV=1 Q3TAB8; Q8K212; A0A494BAE9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pacs1 PE=2 SV=1; Phosphofurin acidic cluster sorting protein 1 OS=Mus musculus OX=10090 GN=Pacs1 PE=1 SV=2; Phosphofurin acidic cluster sorting protein 1 OS=Mus musculus OX=10090 GN=Pacs1 PE=1 SV=1 0 2 2 0.7235 0 1 1 1 766.37469 1531.74211 1531.74106 0.69 0.00053 0/0 0 0 463338.5 HCD 30 MS2 0 23.9 110 26.1867 4459 4459 4457 QEplus033719.raw F4 28.9 20.8 24.8 14.3 35.8 18.9 81 4.63 1 FALSE 1.14E-05 2.23E-13 2.501 -250 4371 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NADDDRGPR [R].nADDDRGPR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 2 2 0.7524 0 1 1 1 622.81232 1244.61736 1244.61809 -0.59 -0.00037 0/0 0 0 296157.9375 HCD 30 MS2 0 23.6 110 26.1917 4461 4461 4457 QEplus033719.raw F4 30 18.7 27.8 18.3 27.2 19.6 97 2.06 1 FALSE 2.26E-05 0.001029 0.66 -250 4377 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQDVATR [R].hQDVATR.[S] N-Term(TMT6plex) 2 Q80X73 Protein pelota homolog OS=Mus musculus OX=10090 GN=Pelo PE=1 SV=3 Q80X73; Q3THL5 Protein pelota homolog OS=Mus musculus OX=10090 GN=Pelo PE=1 SV=3; Protein pelota homolog OS=Mus musculus OX=10090 GN=Pelo PE=2 SV=1 0 2 2 0.5228 0 1 1 1 528.29498 1055.58269 1055.57952 3 0.00158 0/0 0 0 184496.2656 HCD 30 MS2 14.47873 24.6 110 26.1942 4462 4462 4457 QEplus033719.raw F4 49.2 15.3 24.9 23.3 13.1 21.8 127 1.97 1 FALSE 0.0002218 0.004592 0.511 -250 4385 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTESPHQQCSNR [R].dTESPHQQcSNR.[G] N-Term(TMT6plex); C9(Carbamidomethyl) 5 E9Q1M6 Ankyrin repeat and KH domain-containing 1 OS=Mus musculus OX=10090 GN=Ankhd1 PE=1 SV=1 E9Q1M6; E9PUR0; Q6KAP1; F6RRY0; Q8C103 Ankyrin repeat and KH domain-containing 1 OS=Mus musculus OX=10090 GN=Ankhd1 PE=1 SV=1; Ankyrin repeat and KH domain-containing 1 OS=Mus musculus OX=10090 GN=Ankhd1 PE=1 SV=1; MFLJ00246 protein (Fragment) OS=Mus musculus OX=10090 GN=mFLJ00246 PE=4 SV=1; Ankyrin repeat and KH domain-containing 1 (Fragment) OS=Mus musculus OX=10090 GN=Ankhd1 PE=1 SV=1; ANK_REP_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ankhd1 PE=2 SV=1 0 3 3 0.8341 0 1 1 1 563.25977 1687.76474 1687.76556 -0.48 -0.00027 0/0 0 0 1178935 HCD 30 MS2 27.22195 32.6 110 26.1967 4463 4463 4457 QEplus033719.raw F4 35.1 23.2 27.5 29.1 51.8 28.9 40 4.22 1 FALSE 1.14E-05 5.34E-09 1.669 -250 4388 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERPTTSSGGR [R].eRPTTSSGGR.[R] N-Term(TMT6plex) 1 Q546X9 Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Atxn3 PE=1 SV=1 Q546X9 Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Atxn3 PE=1 SV=1 0 3 3 0.4249 0 1 1 1 426.23175 1276.6807 1276.68069 0 0 0/0 0 0 759222.375 HCD 30 MS2 49.80558 76.8 110 26.1992 4464 4464 4457 QEplus033719.raw F4 214.9 33.4 59 57.5 42.2 53.8 253 2.33 1 FALSE 0.001491 0.02159 0.268 -250 4421 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRAEAEAR [R].dRAEAEAR.[E] N-Term(TMT6plex) 16 Q69ZX3; Q5SV64; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q69ZX3; Q811J9; Q80T68; A0A2R8VHF9; A0A338P6K2; O08638-2; O08638; Q5SV64; Q3UH59; Q8VDD5; E9QPE7; Q6PB65; Q4KMN4; Q99JJ3; Q61879 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 1 2 2 0.4286 0 1 1 1 573.80725 1146.60723 1146.60647 0.66 0.00038 0/0 0 0 1168232.625 HCD 30 MS2 7.987998 35.6 110 26.214 4469 4469 4468 QEplus033719.raw F4 62 28.5 43.3 29.3 22.9 27.7 213 2.73 3 FALSE 0.001506 0.02233 0.263 -250 4426 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSHTYTR [R].sSHTYTR.[T] N-Term(TMT6plex) 3 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q3UXJ8; Q8VHX6-2; Q8VHX6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flnc PE=2 SV=1; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.3526 0 1 1 1 540.78583 1080.56438 1080.56354 0.78 0.00042 0/0 0 0 252273.4531 HCD 30 MS2 0 38 110 26.2165 4470 4470 4468 QEplus033719.raw F4 72 16 26.5 66.8 21 25.4 172 1.56 1 FALSE 0.00935 0.175 -0.113 -250 4434 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRAEAEAR [R].dRAEAEAR.[E] N-Term(TMT6plex) 16 Q69ZX3; Q5SV64; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q69ZX3; Q811J9; Q80T68; A0A2R8VHF9; A0A338P6K2; O08638-2; O08638; Q5SV64; Q3UH59; Q8VDD5; E9QPE7; Q6PB65; Q4KMN4; Q99JJ3; Q61879 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 1 3 3 0.4984 0 1 1 1 382.8736 1146.60624 1146.60647 -0.2 -0.00008 0/0 0 0 6658764 HCD 30 MS2 8.942918 306.2 110 26.219 4471 4471 4468 QEplus033719.raw F4 576.2 222.6 352.6 233.1 213.4 239.4 275 3.21 3 FALSE 1.14E-05 9.33E-06 1.053 -250 4439 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQREEYER [K].rQREEYER.[A] N-Term(TMT6plex) 7 Q7M739 Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1 Q32P08; Q05CS8; Q7M739; F6ZDS4; Q3V1L5; Q3TZB5; Q8BU18 Tpr protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Tpr protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1 2 3 3 0.4316 0 1 1 1 465.58298 1394.73438 1394.73379 0.42 0.0002 0/0 0 0 831741.3125 HCD 30 MS2 30.25261 67.2 110 26.2215 4472 4472 4468 QEplus033719.raw F4 68.4 65.4 74 58.4 81.2 55.9 291 2.34 1 FALSE 0.001327 0.01823 0.297 -250 4451 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTDDDRPPR [R].hTDDDRPPR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 0 3 3 0.4792 0 1 1 1 446.56506 1337.68064 1337.67594 3.51 0.00157 0/0 0 0 844159.8125 HCD 30 MS2 64.19817 96.2 110 26.2265 4474 4474 4468 QEplus033719.raw F4 121.1 62.5 104.2 87.8 125.1 76.6 183 3.84 1 FALSE 1.14E-05 2.28E-05 0.979 -250 4458 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGQPCMDHDR [K].dGQPcmDHDR.[Q] N-Term(TMT6plex); C5(Carbamidomethyl); M6(Oxidation) 2 Q8BMJ2 "Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2" Q6ZPT2; Q8BMJ2 "Leucyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1; Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2" 0 3 3 0.6496 0 1 1 1 492.54523 1475.62113 1475.62048 0.44 0.00022 0/0 0 0 838570.8125 HCD 30 MS2 57.04821 33.9 110 26.229 4475 4475 4468 QEplus033719.raw F4 40.5 29.1 38.3 31.1 41.8 22.6 7 2.34 1 FALSE 0.00676 0.1076 -0.014 -250 4479 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CGEESGGASQR [R].cGEESGGASQR.[L] N-Term(TMT6plex); C1(Carbamidomethyl) 7 F6RYD0 Pleckstrin homology-like domain family B member 1 (Fragment) OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1 Q6PDH0-2; F6RYD0; E9PWB1; F6RUK9; D3Z0X5; D3Z4N0; Q6PDH0 Isoform 2 of Pleckstrin homology-like domain family B member 1 OS=Mus musculus OX=10090 GN=Phldb1; Pleckstrin homology-like domain family B member 1 (Fragment) OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1; Pleckstrin homology-like domain family B member 1 OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1; Pleckstrin homology-like domain family B member 1 (Fragment) OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1; Pleckstrin homology-like domain family B member 1 OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1; Pleckstrin homology-like domain family B member 1 OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1; Pleckstrin homology-like domain family B member 1 OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1 0 2 2 0.654 0 1 1 1 683.81506 1366.62285 1366.62186 0.73 0.0005 0/0 0 0 280862.625 HCD 30 MS2 11.59555 21.3 110 26.2438 4480 4480 4479 QEplus033719.raw F4 29.3 19.5 24.9 14.5 25.2 14.7 40 2.37 1 FALSE 1.14E-05 3.91E-05 0.935 -250 4489 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSHTYTR [R].sSHTYTR.[T] N-Term(TMT6plex) 3 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q3UXJ8; Q8VHX6-2; Q8VHX6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flnc PE=2 SV=1; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 3 3 0.375 0 1 1 1 360.85931 1080.56339 1080.56354 -0.14 -0.00005 0/0 0 0 2360430.5 HCD 30 MS2 36.08918 115.6 110 26.2488 4482 4482 4479 QEplus033719.raw F4 201.2 64.4 100.8 204.9 59.4 62.8 146 2.4 1 FALSE 0.0002323 0.004755 0.507 -250 4511 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQQQQHLHR [R].qQQQQHLHR.[Q] N-Term(TMT6plex) 5 Q8C3F2 Constitutive coactivator of PPAR-gamma-like protein 2 OS=Mus musculus OX=10090 GN=Fam120c PE=1 SV=3 Q8C3F2; Q3V3X9; Q8C3F2-2; Q8C3F2-3; B7ZW94 "Constitutive coactivator of PPAR-gamma-like protein 2 OS=Mus musculus OX=10090 GN=Fam120c PE=1 SV=3; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Fam120c PE=2 SV=1; Isoform 2 of Constitutive coactivator of PPAR-gamma-like protein 2 OS=Mus musculus OX=10090 GN=Fam120c; Isoform 3 of Constitutive coactivator of PPAR-gamma-like protein 2 OS=Mus musculus OX=10090 GN=Fam120c; Family with sequence similarity 120, member C OS=Mus musculus OX=10090 GN=Fam120c PE=2 SV=1" 0 3 3 0.6066 0 1 1 1 477.92993 1431.77524 1431.77666 -0.99 -0.00047 0/0 0 0 484013.25 HCD 30 MS2 42.49877 50.2 110 26.2613 4487 4487 4479 QEplus033719.raw F4 63.9 27.8 45.3 65 39.8 59.2 337 4.83 1 FALSE 1.14E-05 5.01E-10 1.864 -250 4524 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CPSDCHGQGR [R].cPSDcHGQGR.[C] N-Term(TMT6plex); C1(Carbamidomethyl); C5(Carbamidomethyl) 8 Q80YX1 Tenascin OS=Mus musculus OX=10090 GN=Tnc PE=1 SV=1 Q80YX1-4; Q80YX1; Q148T4; Q148T5; Q80YX1-2; Q80YX1-3; Q80YX1-5; Q80YX0 Isoform 4 of Tenascin OS=Mus musculus OX=10090 GN=Tnc; Tenascin OS=Mus musculus OX=10090 GN=Tnc PE=1 SV=1; Tnc protein OS=Mus musculus OX=10090 GN=Tnc PE=2 SV=1; Tnc protein OS=Mus musculus OX=10090 GN=Tnc PE=2 SV=1; Isoform 2 of Tenascin OS=Mus musculus OX=10090 GN=Tnc; Isoform 3 of Tenascin OS=Mus musculus OX=10090 GN=Tnc; Isoform 5 of Tenascin OS=Mus musculus OX=10090 GN=Tnc; Tenascin OS=Mus musculus OX=10090 GN=Tnc PE=1 SV=1 0 3 3 0.7591 0 1 1 1 468.21005 1402.6156 1402.61533 0.19 0.00009 0/0 0 0 521714.9375 HCD 30 MS2 57.77534 51.3 110 26.2741 4491 4491 4490 QEplus033719.raw F4 88.2 33 49.6 44.7 59.1 33 11 3.57 1 FALSE 1.14E-05 0.0001245 0.839 -250 4546 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGYGSSSDSR [R].rGYGSSSDSR.[Y] N-Term(TMT6plex) 1 Q9JLJ1 Selenoprotein K OS=Mus musculus OX=10090 GN=Selenok PE=1 SV=3 Q9JLJ1 Selenoprotein K OS=Mus musculus OX=10090 GN=Selenok PE=1 SV=3 1 3 3 0.5439 0 1 1 1 434.21951 1300.64399 1300.64431 -0.25 -0.00011 0/0 0 0 986693.875 HCD 30 MS2 23.98309 60.9 110 26.2815 4494 4494 4490 QEplus033719.raw F4 90.2 49.9 64.1 49.8 62.7 48.8 90 2.39 1 FALSE 1.14E-05 3.93E-05 0.934 -250 4558 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SECCCDGGR [K].sEcccDGGR.[G] N-Term(TMT6plex); C3(Carbamidomethyl); C4(Carbamidomethyl); C5(Carbamidomethyl) 5 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q3TNW1; Q61555; Q571J3 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-2 OS=Mus musculus OX=10090 GN=Fbn2 PE=1 SV=2; MKIAA4226 protein (Fragment) OS=Mus musculus OX=10090 GN=Fbn2 PE=2 SV=1 0 2 2 1 0 1 1 1 665.26361 1329.51995 1329.51832 1.22 0.00081 0/0 0 0 218386.7031 HCD 30 MS2 0 19.1 110 26.2866 4496 4496 4490 QEplus033719.raw F4 26.9 11.5 19.6 21.6 15.7 19.5 3 2.47 1 FALSE 1.14E-05 6.45E-05 0.893 -250 4568 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDGSYGSGR [R].rDGSYGSGR.[S] N-Term(TMT6plex) 3 Q542V3 Serine/arginine-rich-splicing factor 4 OS=Mus musculus OX=10090 GN=Srsf4 PE=1 SV=1 Q542V3; Q8VE97; Q8K3A8 Serine/arginine-rich-splicing factor 4 OS=Mus musculus OX=10090 GN=Srsf4 PE=1 SV=1; Serine/arginine-rich splicing factor 4 OS=Mus musculus OX=10090 GN=Srsf4 PE=2 SV=1; Sfrs4 protein OS=Mus musculus OX=10090 GN=Srsf4 PE=2 SV=1 1 3 3 0.6018 0 1 1 1 395.20575 1183.6027 1183.60171 0.83 0.00033 0/0 0 0 831006.75 HCD 30 MS2 60.48939 102.9 110 26.2915 4498 4498 4490 QEplus033719.raw F4 224.3 49.8 99.4 81 102.9 59.7 101 3.34 1 FALSE 1.14E-05 0.0003412 0.755 -250 4578 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQAEACR [K].sQAEAcR.[A] N-Term(TMT6plex); C6(Carbamidomethyl) 5 Q64737 Trifunctional purine biosynthetic protein adenosine-3 OS=Mus musculus OX=10090 GN=Gart PE=1 SV=3 Q64737; Q3TH49; Q3UJP8; A0A338P6X4; D6RCG1 Trifunctional purine biosynthetic protein adenosine-3 OS=Mus musculus OX=10090 GN=Gart PE=1 SV=3; Glycinamide ribonucleotide synthetase OS=Mus musculus OX=10090 GN=Gart PE=2 SV=1; Trifunctional purine biosynthetic protein adenosine-3 OS=Mus musculus OX=10090 GN=Gart PE=2 SV=1; Trifunctional purine biosynthetic protein adenosine-3 (Fragment) OS=Mus musculus OX=10090 GN=Gart PE=1 SV=1; Trifunctional purine biosynthetic protein adenosine-3 OS=Mus musculus OX=10090 GN=Gart PE=1 SV=1 0 2 2 0.57 0 1 1 1 525.76373 1050.52019 1050.51996 0.22 0.00012 0/0 0 0 426206.5 HCD 30 MS2 0 33.4 110 26.2965 4500 4500 4490 QEplus033719.raw F4 72.8 23.3 36.4 14 20.3 33.4 73 2 1 FALSE 5.44E-05 0.002521 0.576 -250 4592 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTDDDRPPR [R].hTDDDRPPR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 0 2 2 0.6809 0 1 1 1 669.34283 1337.67839 1337.67594 1.83 0.00123 0/0 0 0 308151.2813 HCD 30 MS2 52.41532 25.2 110 26.3064 4503 4503 4501 QEplus033719.raw F4 33.9 18.5 25.7 19.9 32.3 21.2 173 2.35 1 FALSE 4.43E-05 0.001494 0.626 -250 4598 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AREETGAEGR [R].aREETGAEGR.[V] N-Term(TMT6plex) 9 Q8C141 Propionate--CoA ligase OS=Mus musculus OX=10090 GN=Acss2 PE=2 SV=1 Q8C141; A2AQN4; D6RHA7; Q8C113; Q8BY91; Q8C1A8; Q9QXG4; A2AQN5; Q8N9U3 "Propionate--CoA ligase OS=Mus musculus OX=10090 GN=Acss2 PE=2 SV=1; Propionate--CoA ligase OS=Mus musculus OX=10090 GN=Acss2 PE=1 SV=1; Acetyl-coenzyme A synthetase, cytoplasmic OS=Mus musculus OX=10090 GN=Acss2 PE=1 SV=1; Propionate--CoA ligase OS=Mus musculus OX=10090 PE=2 SV=1; ACAS_N domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Propionate--CoA ligase OS=Mus musculus OX=10090 GN=Acss2 PE=2 SV=1; Acetyl-coenzyme A synthetase, cytoplasmic OS=Mus musculus OX=10090 GN=Acss2 PE=1 SV=2; Propionate--CoA ligase OS=Mus musculus OX=10090 GN=Acss2 PE=1 SV=1; Propionate--CoA ligase OS=Mus musculus OX=10090 GN=Acss2 PE=2 SV=1" 1 3 3 0.5904 0 1 1 1 435.56317 1304.67496 1304.67561 -0.5 -0.00022 0/0 0 0 1441244.875 HCD 30 MS2 16.04994 119.1 110 26.3138 4506 4506 4501 QEplus033719.raw F4 231.3 60 118 131.8 76.3 97.3 209 4.15 1 FALSE 1.14E-05 4.99E-06 1.105 -250 4623 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEQSQQQAAR [K].aEQSQQQAAR.[K] N-Term(TMT6plex) 7 Q922J3 CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1 Q922J3-2; Q922J3; D3Z3M7; F7CB97; F6RCU2; F8WIA1; D3Z2Z1 Isoform 2 of CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1; CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; CAP-Gly domain-containing linker protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; CAP-Gly domain-containing linker protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1 0 2 2 0.5085 0 1 1 1 673.3537 1345.70012 1345.70216 -1.51 -0.00102 0/0 0 0 440600.8438 HCD 30 MS2 0 30.8 110 26.3213 4509 4509 4501 QEplus033719.raw F4 54.5 20.2 36.4 27.2 17.1 29.6 176 2.95 1 FALSE 1.14E-05 6.47E-08 1.463 -250 4634 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTDDDRPPR [R].hTDDDRPPR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 0 2 2 0.7054 0 1 1 1 669.34283 1337.67839 1337.67594 1.83 0.00123 0/0 0 0 308151.2813 HCD 30 MS2 36.01118 25.2 110 26.3264 4511 4511 4501 QEplus033719.raw F4 33.9 18.5 25.7 19.9 32.3 21.2 173 2.58 1 FALSE 1.14E-05 0.0005636 0.712 -250 4656 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AREETGAEGR [R].aREETGAEGR.[V] N-Term(TMT6plex) 9 Q8C141 Propionate--CoA ligase OS=Mus musculus OX=10090 GN=Acss2 PE=2 SV=1 Q8C141; A2AQN4; D6RHA7; Q8C113; Q8BY91; Q8C1A8; Q9QXG4; A2AQN5; Q8N9U3 "Propionate--CoA ligase OS=Mus musculus OX=10090 GN=Acss2 PE=2 SV=1; Propionate--CoA ligase OS=Mus musculus OX=10090 GN=Acss2 PE=1 SV=1; Acetyl-coenzyme A synthetase, cytoplasmic OS=Mus musculus OX=10090 GN=Acss2 PE=1 SV=1; Propionate--CoA ligase OS=Mus musculus OX=10090 PE=2 SV=1; ACAS_N domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Propionate--CoA ligase OS=Mus musculus OX=10090 GN=Acss2 PE=2 SV=1; Acetyl-coenzyme A synthetase, cytoplasmic OS=Mus musculus OX=10090 GN=Acss2 PE=1 SV=2; Propionate--CoA ligase OS=Mus musculus OX=10090 GN=Acss2 PE=1 SV=1; Propionate--CoA ligase OS=Mus musculus OX=10090 GN=Acss2 PE=2 SV=1" 1 2 2 0.2284 0 1 1 1 652.84137 1304.67546 1304.67561 -0.11 -0.00007 0/0 0 0 190544.2188 HCD 30 MS2 0 7.9 110 26.3437 4517 4517 4512 QEplus033719.raw F4 12.1 4.7 9 8 6.5 7.3 209 1.97 1 FALSE 0.001632 0.02664 0.234 -250 4661 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYGSGSRR [K].sYGSGSRR.[RE] N-Term(TMT6plex) 4 Q6NVF9 Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1 H3BKW0; Q6NVF9; H3BJ30; H3BJW3 Cleavage and polyadenylation-specificity factor subunit 6 (Fragment) OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1; Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1; Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1; Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1 1 3 3 0.3934 0 1 1 1 366.86667 1098.58545 1098.58534 0.11 0.00004 0/0 0 0 540972.6875 HCD 30 MS2 63.96479 79.1 110 26.3462 4518 4518 4512 QEplus033719.raw F4 125.9 59.1 84.3 61.9 76.7 66.4 126 1.83 1 FALSE 0.002603 0.05157 0.137 -250 4667 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTSSERPQDSR [K].qTSSERPQDSR.[R] N-Term(TMT6plex) 3 Q9ET54-6; Q9ET54 Isoform 6 of Palladin OS=Mus musculus OX=10090 GN=Palld;Palladin OS=Mus musculus OX=10090 GN=Palld PE=1 SV=2 Q9ET54-2; Q9ET54-6; Q9ET54 Isoform 2 of Palladin OS=Mus musculus OX=10090 GN=Palld; Isoform 6 of Palladin OS=Mus musculus OX=10090 GN=Palld; Palladin OS=Mus musculus OX=10090 GN=Palld PE=1 SV=2 0 3 3 0.5347 0 1 1 1 507.2612 1519.76905 1519.76621 1.86 0.00094 0/0 0 0 278893.125 HCD 30 MS2 25.3702 36.7 110 26.3487 4519 4519 4512 QEplus033719.raw F4 53.3 15.5 40.6 43.6 14.7 52.4 190 2.88 2 FALSE 1.14E-05 0.0001582 0.819 -250 4679 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAHATEESGDSR [K].dAHATEESGDSR.[A] N-Term(TMT6plex) 10 P02340 Cellular tumor antigen p53 OS=Mus musculus OX=10090 GN=Tp53 PE=1 SV=4 P02340; O70366; A0A158SIS7; I7HIK9; Q9JLE1; Q91XH8; Q9JLE0; A0A5Q0MU23; W5VJU6; Q80ZA1 Cellular tumor antigen p53 OS=Mus musculus OX=10090 GN=Tp53 PE=1 SV=4; Cellular tumor antigen p53 OS=Mus musculus OX=10090 GN=Trp53 PE=2 SV=1; Cellular tumor antigen p53 OS=Mus musculus OX=10090 GN=Trp53 PE=1 SV=1; Cellular tumor antigen p53 OS=Mus musculus OX=10090 GN=Trp53 PE=1 SV=1; p53 tumor suppressor (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Cellular tumor antigen p53 OS=Mus musculus OX=10090 GN=Trp53 PE=2 SV=1; p53 tumor suppressor (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Cellular tumor antigen p53 OS=Mus musculus OX=10090 GN=Trp53 PE=2 SV=1; Cellular tumor antigen p53 OS=Mus musculus OX=10090 GN=Trp53 PE=2 SV=1; Cellular tumor antigen p53 OS=Mus musculus OX=10090 GN=Trp53 PE=1 SV=1 0 3 3 0.8023 0 1 1 1 501.90112 1503.68882 1503.68729 1.01 0.00051 0/0 0 0 370726.4063 HCD 30 MS2 0 28.3 110 26.3537 4521 4521 4512 QEplus033719.raw F4 36.2 19.4 33.9 25.7 32.5 22.3 25 4.35 1 FALSE 1.14E-05 1.02E-08 1.615 -250 4709 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQQENMQR [R].rQQENMQR.[Q] N-Term(TMT6plex) 5 Q3THW7 Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1 Q3THW7; Q8BTX5; Q5M9L0; Q3TII2; Q3TIK5 Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1 1 3 3 0.6667 0 1 1 1 440.23373 1318.68665 1318.68473 1.45 0.00064 0/0 0 0 838277.9375 HCD 30 MS2 0 84.5 110 26.374 4528 4528 4523 QEplus033719.raw F4 128 61.6 89.9 74.8 84.6 68 222 4.47 1 FALSE 1.14E-05 2.53E-07 1.351 -250 4713 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQDLHQQNR [R].rQDLHQQNR.[K] N-Term(TMT6plex) 4 Q8CGC1 Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1 Q8CGC1; O88662; Q8BPC2; O88355 Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1; Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=1 SV=1; Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1; Xmp (Fragment) OS=Mus musculus OX=10090 GN=Xmp PE=4 SV=1 1 3 3 0.6361 0 1 1 1 475.26227 1423.77225 1423.77157 0.48 0.00023 0/0 0 0 641851.5625 HCD 30 MS2 21.45041 50.5 110 26.3765 4529 4529 4523 QEplus033719.raw F4 53 42.7 52.3 68.7 41.2 45 333 3.38 1 FALSE 1.14E-05 7.48E-12 2.211 -250 4719 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVCRPNDRR [K].hVcRPNDRR.[S] N-Term(TMT6plex); C3(Carbamidomethyl) 1 A0A0G2JFH2 Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 A0A0G2JFH2 Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 1 3 3 0.2287 0 1 1 1 480.26028 1438.7663 1438.76471 1.1 0.00053 0/0 0 0 474423.4063 HCD 30 MS2 16.84121 44.1 110 26.379 4530 4530 4523 QEplus033719.raw F4 63.6 18.6 46.1 69.5 16.7 50.1 292 1.88 1 FALSE 0.008455 0.1481 -0.085 -250 4737 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGTLLGASAK [K].eGTLLGASAk.[Y] N-Term(TMT6plex); K10(TMT6plex) 3 A0A1L1SR84 Protein turtle homolog B OS=Mus musculus OX=10090 GN=Igsf9b PE=1 SV=1 A0A1L1SR84; D3Z169; E9PZ19 Protein turtle homolog B OS=Mus musculus OX=10090 GN=Igsf9b PE=1 SV=1; Protein turtle homolog B OS=Mus musculus OX=10090 GN=Igsf9b PE=1 SV=1; Protein turtle homolog B OS=Mus musculus OX=10090 GN=Igsf9b PE=1 SV=1 0 4 4 0.246 0 1 1 1 351.96646 1404.84401 1404.84625 -1.59 -0.00056 0/0 0 0 788478.5 HCD 30 MS2 57.00187 93.2 110 26.3865 4533 4533 4523 QEplus033719.raw F4 169.6 64.7 101.1 57.1 83.4 83.2 398 2.48 1 FALSE 0.005189 0.08864 0.038 -250 4757 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAQQQAEAER [R].rAQQQAEAER.[A] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.5385 0 1 1 1 472.59003 1415.75553 1415.75525 0.19 0.00009 0/0 0 0 8626504 HCD 30 MS2 35.08422 241.9 110 26.3989 4537 4537 4534 QEplus033719.raw F4 316.8 149.9 244.6 352.6 169.3 218 285 5.46 2 FALSE 1.14E-05 2.04E-09 1.748 -250 4788 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RCENAEPR [K].rcENAEPR.[H] N-Term(TMT6plex); C2(Carbamidomethyl) 1 Q91YR7 Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1 Q91YR7 Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1 1 3 3 0.6257 0 1 1 1 420.88153 1260.63004 1260.63163 -1.27 -0.00053 0/0 0 0 1578210.75 HCD 30 MS2 37.95419 120.4 110 26.4113 4542 4542 4534 QEplus033719.raw F4 220 56.8 122.8 82.2 128 112.8 104 3.5 1 FALSE 1.14E-05 4.64E-05 0.921 -250 4793 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAQQQAEAER [R].rAQQQAEAER.[A] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.6384 0 1 1 1 708.38141 1415.75554 1415.75525 0.2 0.00014 0/0 0 0 1195550 HCD 30 MS2 14.56281 42.8 110 26.4138 4543 4543 4534 QEplus033719.raw F4 55.2 26.6 39.9 64.4 31.8 39.1 285 3.65 2 FALSE 1.14E-05 6.90E-09 1.648 -250 4797 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQQENMQR [R].rQQENMQR.[Q] N-Term(TMT6plex) 5 Q3THW7 Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1 Q3THW7; Q8BTX5; Q5M9L0; Q3TII2; Q3TIK5 Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1 1 2 2 0.6009 0 1 1 1 659.84668 1318.68608 1318.68473 1.02 0.00068 0/0 0 0 287729.0625 HCD 30 MS2 0 18.7 110 26.4163 4544 4544 4534 QEplus033719.raw F4 21.7 11.3 22.7 17 20.1 19.2 229 2.23 1 FALSE 0.001964 0.03388 0.198 -250 4800 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GATSGRPAGER [R].gATSGRPAGER.[R] N-Term(TMT6plex) 5 Q91VW2 Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Mus musculus OX=10090 GN=Mindy1 PE=2 SV=1 Q76LS9-2; Q91VW2; Q6IS37; Q76LS9-3; B7ZMR0 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase MINDY-1 OS=Mus musculus OX=10090 GN=Mindy1; Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Mus musculus OX=10090 GN=Mindy1 PE=2 SV=1; Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Mus musculus OX=10090 GN=Mindy1 PE=2 SV=1; Isoform 3 of Ubiquitin carboxyl-terminal hydrolase MINDY-1 OS=Mus musculus OX=10090 GN=Mindy1; Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Mindy1 PE=2 SV=1 0 3 3 0.5017 0 1 1 1 429.90375 1287.69669 1287.69668 0.01 0 0/0 0 0 1325710.875 HCD 30 MS2 15.49294 123.2 110 26.4242 4546 4546 4545 QEplus033719.raw F4 149 81.6 137.2 115.3 129.5 126.7 306 2.93 1 FALSE 1.14E-05 0.0001763 0.81 -250 4812 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQDLHQQNR [R].rQDLHQQNR.[K] N-Term(TMT6plex) 4 Q8CGC1 Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1 Q8CGC1; O88662; Q8BPC2; O88355 Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1; Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=1 SV=1; Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1; Xmp (Fragment) OS=Mus musculus OX=10090 GN=Xmp PE=4 SV=1 1 4 4 0.5621 0 1 1 1 356.69843 1423.77187 1423.77157 0.21 0.00007 0/0 0 0 4609834.5 HCD 30 MS2 49.62671 193.9 110 26.4292 4548 4548 4545 QEplus033719.raw F4 301 126 176.2 231.3 161.7 167.5 336 3.06 1 FALSE 1.14E-05 8.66E-05 0.869 -250 4818 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVCRPNDRR [K].hVcRPNDRR.[S] N-Term(TMT6plex); C3(Carbamidomethyl) 1 A0A0G2JFH2 Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 A0A0G2JFH2 Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 1 4 4 0.3896 0 1 1 1 360.44656 1438.76442 1438.76471 -0.2 -0.00007 0/0 0 0 3626688 HCD 30 MS2 11.21148 143.8 110 26.4316 4549 4549 4545 QEplus033719.raw F4 204.4 42.7 152.8 220.3 59.5 182.8 272 3.08 1 FALSE 0.0002909 0.005811 0.483 -250 4823 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARVECQSHR [R].aRVEcQSHR.[L] N-Term(TMT6plex); C5(Carbamidomethyl) 4 Q542H2 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma7 PE=1 SV=1 Q542H2; Q3UIT9; Q3THL2; A0A338P7D7 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma7 PE=1 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma7 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psma7 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma7 PE=1 SV=1 1 3 3 0.6148 0 1 1 1 457.90829 1371.71033 1371.71128 -0.69 -0.00032 0/0 0 0 1145075.75 HCD 30 MS2 9.346307 89.9 110 26.4341 4550 4550 4545 QEplus033719.raw F4 103 66.4 117.3 116.1 57 79.6 171 4.18 1 FALSE 1.14E-05 3.61E-06 1.131 -250 4829 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TADEDRGPRR [R].tADEDRGPRR.[G] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 2 4 4 0.3942 0 1 1 1 351.19049 1401.74013 1401.7396 0.38 0.00013 0/0 0 0 1062480.25 HCD 30 MS2 22.00138 95.1 110 26.4366 4551 4551 4545 QEplus033719.raw F4 127.7 67.5 97.2 75.3 122.9 79.9 252 3.45 1 FALSE 1.14E-05 6.46E-06 1.083 -250 4855 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQDLHQQNR [R].rQDLHQQNR.[K] N-Term(TMT6plex) 4 Q8CGC1 Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1 Q8CGC1; O88662; Q8BPC2; O88355 Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1; Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=1 SV=1; Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1; Xmp (Fragment) OS=Mus musculus OX=10090 GN=Xmp PE=4 SV=1 1 2 2 0.6301 0 1 1 1 712.38995 1423.77263 1423.77157 0.74 0.00053 0/0 0 0 279680.1563 HCD 30 MS2 35.47383 10.8 110 26.4565 4558 4558 4556 QEplus033719.raw F4 10.1 8.5 13.4 12.5 10.2 10.4 352 1.73 1 FALSE 0.001753 0.02996 0.217 -250 4864 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HREEIGNR [K].hREEIGNR.[Y] N-Term(TMT6plex) 4 E9Q179 G-rich sequence factor 1 OS=Mus musculus OX=10090 GN=Grsf1 PE=1 SV=1 E9Q179; D3YUN1; Q8C298; Q8C5Q4 G-rich sequence factor 1 OS=Mus musculus OX=10090 GN=Grsf1 PE=1 SV=1; G-rich sequence factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Grsf1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Grsf1 PE=2 SV=1; G-rich sequence factor 1 OS=Mus musculus OX=10090 GN=Grsf1 PE=1 SV=2 1 3 3 0.5417 0 1 1 1 413.89667 1239.67545 1239.67555 -0.08 -0.00003 0/0 0 0 4594438 HCD 30 MS2 4.331699 199.2 110 26.459 4559 4559 4556 QEplus033719.raw F4 239.3 129.4 183.7 237.7 258.7 146.5 276 3.12 1 FALSE 1.14E-05 1.59E-05 1.009 -250 4870 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARDPPPAHR [R].aRDPPPAHR.[A] N-Term(TMT6plex) 4 Q791T5 Mitochondrial carrier homolog 1 OS=Mus musculus OX=10090 GN=Mtch1 PE=1 SV=1 Q791T5-2; Q8CEY5; Q791T5; A0A3Q4EC97 Isoform 2 of Mitochondrial carrier homolog 1 OS=Mus musculus OX=10090 GN=Mtch1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mtch1 PE=2 SV=1; Mitochondrial carrier homolog 1 OS=Mus musculus OX=10090 GN=Mtch1 PE=1 SV=1; Mitochondrial carrier homolog 1 (Fragment) OS=Mus musculus OX=10090 GN=Mtch1 PE=1 SV=1 1 3 3 0.6416 0 1 1 1 415.90512 1245.70081 1245.70137 -0.45 -0.00019 0/0 0 0 3545322 HCD 30 MS2 48.80579 235.7 110 26.4615 4560 4560 4556 QEplus033719.raw F4 262.1 158.7 258.6 231.9 260.3 242.5 360 2.93 1 FALSE 1.14E-05 0.000546 0.715 -250 4879 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRQEEAAVR [R].rRQEEAAVR.[G] N-Term(TMT6plex) 4 B2RWV7 2310014H01Rik protein OS=Mus musculus OX=10090 GN=Ppp1r18 PE=2 SV=1 Q8BQ30-2; B2RWV7; Q8BQ30; B7ZND7 Isoform 2 of Phostensin OS=Mus musculus OX=10090 GN=Ppp1r18; 2310014H01Rik protein OS=Mus musculus OX=10090 GN=Ppp1r18 PE=2 SV=1; Phostensin OS=Mus musculus OX=10090 GN=Ppp1r18 PE=1 SV=1; 2310014H01Rik protein OS=Mus musculus OX=10090 GN=Ppp1r18 PE=2 SV=1 2 3 3 0.5676 0 1 1 1 448.59497 1343.77036 1343.77051 -0.11 -0.00005 0/0 0 0 3081291.25 HCD 30 MS2 23.86684 92.4 110 26.464 4561 4561 4556 QEplus033719.raw F4 96.4 74 95.8 77.5 137.7 73.2 380 2.59 1 FALSE 1.14E-05 0.0002615 0.777 -250 4891 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TADEDRGPRR [R].tADEDRGPRR.[G] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 2 3 3 0.4144 0 1 1 1 467.91904 1401.74256 1401.7396 2.11 0.00098 0/0 0 0 1131000.625 HCD 30 MS2 7.793272 88.2 110 26.4689 4563 4563 4556 QEplus033719.raw F4 122.2 67.2 91.7 63.9 117.7 66.3 268 2.63 1 FALSE 0.00171 0.02838 0.225 -250 4903 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRVETSR [K].gRVETSR.[V] N-Term(TMT6plex) 9 Q6ZQ61 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1 Q6ZQ61; Q4FJT0; A0A494B9X1; A0A494BAL7; Q3TTX0; A0A494BAZ7; A0A494BAD4; Q3TZN1; Q5BL18 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matr3 protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Small nucleolar RNA host gene 4 (Fragment) OS=Mus musculus OX=10090 GN=Snhg4 PE=4 SV=1; Small nucleolar RNA host gene 4 (Fragment) OS=Mus musculus OX=10090 GN=Snhg4 PE=4 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin-3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1; Matrin-3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin 3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1 1 2 2 0.5 0 1 1 1 517.30151 1033.59575 1033.59517 0.56 0.00029 0/0 0 0 941610.625 HCD 30 MS2 0 53 110 26.4739 4565 4565 4556 QEplus033719.raw F4 118.4 34.1 47.5 40.5 27.9 49.5 173 1.92 1 FALSE 0.00676 0.1074 -0.013 -250 4910 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEHNQVANR [R].tEHNQVANR.[L] N-Term(TMT6plex) 1 Q61029-2 "Isoform Delta of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo" Q61029-2 "Isoform Delta of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo" 0 3 3 0.6122 0 1 1 1 433.23248 1297.6829 1297.68103 1.44 0.00062 0/0 0 0 682728.4375 HCD 30 MS2 43.66935 43 110 26.4764 4566 4566 4556 QEplus033719.raw F4 66.5 25.3 49.7 41.8 32.1 42.5 211 3.92 1 FALSE 1.14E-05 1.54E-05 1.012 -250 4929 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAHGGTAEQDPR [K].gAHGGTAEQDPR.[E] N-Term(TMT6plex) 6 O70318 Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2 Q7TPN6; O70318; B6ZHD0; Q80UE5; Q80UE3; Q3UNQ6 Epb4.1l2 protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Protein 4.1G OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1 0 3 3 0.7137 0 1 1 1 475.57388 1424.7071 1424.70797 -0.61 -0.00029 0/0 0 0 7067330.5 HCD 30 MS2 50.84997 183.1 110 26.491 4571 4571 4567 QEplus033719.raw F4 170.6 147.1 215.2 237.8 153.7 174.4 120 4.61 1 FALSE 1.14E-05 3.45E-10 1.895 -250 4933 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNDGEEQGVHNR [K].nNDGEEQGVHNR.[A] N-Term(TMT6plex) 2 D3YVW2 Golgi integral membrane protein 4 OS=Mus musculus OX=10090 GN=Golim4 PE=1 SV=1 D3YVW2; Q8BXA1 Golgi integral membrane protein 4 OS=Mus musculus OX=10090 GN=Golim4 PE=1 SV=1; Golgi integral membrane protein 4 OS=Mus musculus OX=10090 GN=Golim4 PE=1 SV=1 0 3 3 0.8286 0 1 1 1 533.25537 1597.75156 1597.75163 -0.04 -0.00002 0/0 0 0 2387168.5 HCD 30 MS2 7.891642 47.3 110 26.4935 4572 4572 4567 QEplus033719.raw F4 47.3 35.6 47.1 32.6 73.4 48.1 69 5.95 1 FALSE 1.14E-05 4.27E-14 2.637 -250 4939 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTCPGDR [K].nTcPGDR.[S] N-Term(TMT6plex); C3(Carbamidomethyl) 2 Q9CZN7 "Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" Q9CZN7-2; Q9CZN7 "Isoform 2 of Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2; Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" 0 2 2 0.6598 0 1 1 1 524.75586 1048.50444 1048.50431 0.13 0.00007 0/0 0 0 835994.5625 HCD 30 MS2 8.090269 73.4 110 26.496 4573 4573 4567 QEplus033719.raw F4 145 49 84.2 51.4 41.4 69.2 54 2.41 1 FALSE 0.003182 0.06211 0.108 -250 4941 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSSSSSSPSERPR [R].nSSSSSSPSERPR.[Q] N-Term(TMT6plex) 2 Q8VC03 Echinoderm microtubule-associated protein-like 3 OS=Mus musculus OX=10090 GN=Eml3 PE=1 SV=1 Q8VC03; A0A286YDN1 Echinoderm microtubule-associated protein-like 3 OS=Mus musculus OX=10090 GN=Eml3 PE=1 SV=1; Echinoderm microtubule-associated protein-like 3 OS=Mus musculus OX=10090 GN=Eml3 PE=1 SV=1 0 3 3 0.7003 0 1 1 1 536.27008 1606.79569 1606.79824 -1.59 -0.00085 0/0 0 0 827914.75 HCD 30 MS2 36.72529 66.9 110 26.4985 4574 4574 4567 QEplus033719.raw F4 112.2 57.9 66.4 46.9 66 52 140 3.57 1 FALSE 1.14E-05 6.48E-08 1.463 -250 4954 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAHGGTAEQDPR [K].gAHGGTAEQDPR.[E] N-Term(TMT6plex) 6 O70318 Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2 Q7TPN6; O70318; B6ZHD0; Q80UE5; Q80UE3; Q3UNQ6 Epb4.1l2 protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Protein 4.1G OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1 0 2 2 0.5983 0 1 1 1 712.85748 1424.70769 1424.70797 -0.2 -0.00014 0/0 0 0 325856.5625 HCD 30 MS2 49.39728 21.1 110 26.5035 4576 4576 4567 QEplus033719.raw F4 21.8 19.3 19.7 24.6 16.7 24.8 122 2.29 1 FALSE 1.14E-05 3.72E-06 1.129 -250 4958 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TANQGNGTGEAR [R].tANQGNGTGEAR.[D] N-Term(TMT6plex) 1 Q3U487 E3 ubiquitin-protein ligase HECTD3 OS=Mus musculus OX=10090 GN=Hectd3 PE=1 SV=2 Q3U487 E3 ubiquitin-protein ligase HECTD3 OS=Mus musculus OX=10090 GN=Hectd3 PE=1 SV=2 0 2 2 0.3437 0 1 1 1 702.85748 1404.70769 1404.70288 3.42 0.0024 0/0 0 0 154332.7813 HCD 30 MS2 0 18.7 110 26.5061 4577 4577 4567 QEplus033719.raw F4 26.8 13.8 19.3 21.1 15.3 15.7 136 1.92 1 FALSE 0.00079 0.01098 0.389 -250 4968 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARVECQSHR [R].aRVEcQSHR.[L] N-Term(TMT6plex); C5(Carbamidomethyl) 4 Q542H2 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma7 PE=1 SV=1 Q542H2; Q3UIT9; Q3THL2; A0A338P7D7 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma7 PE=1 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma7 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psma7 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma7 PE=1 SV=1 1 2 2 0.4343 0 1 1 1 686.35913 1371.71099 1371.71128 -0.22 -0.00015 0/0 0 0 436017.9688 HCD 30 MS2 9.930707 6.6 110 26.5164 4580 4580 4578 QEplus033719.raw F4 5.9 3.8 8.2 9 5.4 7.4 169 1.75 1 FALSE 0.0037 0.07072 0.086 -250 4977 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HENHAVTPR [K].hENHAVTPR.[F] N-Term(TMT6plex) 2 E9PZJ8 Activating signal cointegrator 1 complex subunit 3 OS=Mus musculus OX=10090 GN=Ascc3 PE=1 SV=1 E9PZJ8-2; E9PZJ8 Isoform 2 of Activating signal cointegrator 1 complex subunit 3 OS=Mus musculus OX=10090 GN=Ascc3; Activating signal cointegrator 1 complex subunit 3 OS=Mus musculus OX=10090 GN=Ascc3 PE=1 SV=1 0 3 3 0.539 0 1 1 1 430.56873 1289.69162 1289.6912 0.33 0.00014 0/0 0 0 325299.8438 HCD 30 MS2 38.13646 50.8 110 26.5189 4581 4581 4578 QEplus033719.raw F4 71.5 31.5 70.6 43.1 49.6 38.3 298 2.95 1 FALSE 1.14E-05 0.0001618 0.817 -250 4984 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAHQAGDR [K].vAHQAGDR.[W] N-Term(TMT6plex) 5 Q8C2S9 Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1 Q8C2S9; Q3U7S9; Q9EQK5; E9Q3X0; Q3THX5 Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=1 SV=4; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=1 SV=1; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1 0 2 2 0.5733 0 1 1 1 541.79944 1082.5916 1082.59042 1.09 0.00059 0/0 0 0 303912.2188 HCD 30 MS2 0 39.7 110 26.5214 4582 4582 4578 QEplus033719.raw F4 127.4 11.2 23.8 19.9 13.1 42.5 154 2.25 1 FALSE 1.14E-05 0.0003813 0.745 -250 4999 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNDGEEQGVHNR [K].nNDGEEQGVHNR.[A] N-Term(TMT6plex) 2 D3YVW2 Golgi integral membrane protein 4 OS=Mus musculus OX=10090 GN=Golim4 PE=1 SV=1 D3YVW2; Q8BXA1 Golgi integral membrane protein 4 OS=Mus musculus OX=10090 GN=Golim4 PE=1 SV=1; Golgi integral membrane protein 4 OS=Mus musculus OX=10090 GN=Golim4 PE=1 SV=1 0 2 2 0.737 0 1 1 1 799.37689 1597.74651 1597.75163 -3.2 -0.00256 0/0 0 0 102743.0156 HCD 30 MS2 0 17.6 110 26.5265 4584 4584 4578 QEplus033719.raw F4 20.2 9.2 15.2 12 32.7 16.5 59 2.7 1 FALSE 1.14E-05 0.0005607 0.712 -250 5002 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTEEPDRDER [K].rTEEPDRDER.[L] N-Term(TMT6plex) 3 Q5SUF2 Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1 Q5SUF2-2; Q5SUF2-3; Q5SUF2 Isoform 2 of Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3; Isoform 3 of Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3; Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1 2 3 3 0.5732 0 1 1 1 511.26007 1531.76566 1531.76621 -0.36 -0.00018 0/0 0 0 2178286.25 HCD 30 MS2 36.72359 72.8 110 26.5289 4585 4585 4578 QEplus033719.raw F4 75.5 64.2 84.4 53.2 78.3 81 139 3.28 1 FALSE 1.14E-05 8.87E-05 0.867 -250 5022 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSEDSSENAASR [K].sSEDSSENAASR.[G] N-Term(TMT6plex) 8 F6U338 Nuclear receptor corepressor 1 (Fragment) OS=Mus musculus OX=10090 GN=Ncor1 PE=1 SV=8 F6U338; Q8CHB6; F6SFD2; Q3UV08; E9Q8K6; Q5RIM6; Q60974; Q60974-2 Nuclear receptor corepressor 1 (Fragment) OS=Mus musculus OX=10090 GN=Ncor1 PE=1 SV=8; MKIAA1047 protein (Fragment) OS=Mus musculus OX=10090 GN=Ncor1 PE=1 SV=1; Nuclear receptor corepressor 1 (Fragment) OS=Mus musculus OX=10090 GN=Ncor1 PE=1 SV=1; Nuclear receptor corepressor 1 (Fragment) OS=Mus musculus OX=10090 GN=Ncor1 PE=1 SV=1; Nuclear receptor corepressor 1 (Fragment) OS=Mus musculus OX=10090 GN=Ncor1 PE=1 SV=1; Nuclear receptor corepressor 1 OS=Mus musculus OX=10090 GN=Ncor1 PE=1 SV=1; Nuclear receptor corepressor 1 OS=Mus musculus OX=10090 GN=Ncor1 PE=1 SV=1; Isoform 2 of Nuclear receptor corepressor 1 OS=Mus musculus OX=10090 GN=Ncor1 0 2 2 0.6708 0 1 1 1 734.83997 1468.67266 1468.67131 0.92 0.00067 0/0 0 0 194637.8281 HCD 30 MS2 0 13.7 110 26.5438 4590 4590 4589 QEplus033719.raw F4 17.4 13.7 14.5 8.9 15.4 12.1 42 2.43 1 FALSE 0.001877 0.03163 0.209 -250 5032 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTEEPDRDER [K].rTEEPDRDER.[L] N-Term(TMT6plex) 3 Q5SUF2 Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1 Q5SUF2-2; Q5SUF2-3; Q5SUF2 Isoform 2 of Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3; Isoform 3 of Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3; Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1 2 4 4 0.5793 0 1 1 1 383.69662 1531.76467 1531.76621 -1.01 -0.00039 0/0 0 0 8523443 HCD 30 MS2 21.53847 179.4 110 26.5488 4592 4592 4589 QEplus033719.raw F4 209 153.5 185 132.1 236.7 160 127 3.09 1 FALSE 4.43E-05 0.00147 0.627 -250 5037 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAHQAGDR [K].vAHQAGDR.[W] N-Term(TMT6plex) 5 Q8C2S9 Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1 Q8C2S9; Q3U7S9; Q9EQK5; E9Q3X0; Q3THX5 Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=1 SV=4; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=1 SV=1; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1 0 3 3 0.6555 0 1 1 1 361.535 1082.59046 1082.59042 0.03 0.00001 0/0 0 0 3209268.75 HCD 30 MS2 29.38505 91.1 110 26.5538 4594 4594 4589 QEplus033719.raw F4 253.4 33.2 70 69.9 33 87.3 131 3.28 1 FALSE 1.14E-05 0.0002204 0.791 -250 5047 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENCRPDGR [K-].eNcRPDGR.[E] N-Term(TMT6plex); C3(Carbamidomethyl) 7 D3YYN3 Ribosomal RNA-processing protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Exosc8 PE=1 SV=1 D3YYN3; Q9D753; F6SGT4; Q3TEB9; Q6PCW8; Q6NX62; Q571G2 Ribosomal RNA-processing protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Exosc8 PE=1 SV=1; Exosome complex component RRP43 OS=Mus musculus OX=10090 GN=Exosc8 PE=1 SV=1; Ribosomal RNA-processing protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Exosc8 PE=1 SV=1; Ribosomal RNA-processing protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Exosc8 PE=2 SV=1; Ribosomal RNA-processing protein 43 OS=Mus musculus OX=10090 GN=Exosc8 PE=2 SV=1; Ribosomal RNA-processing protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Exosc8 PE=2 SV=1; Ribosomal RNA-processing protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Exosc8 PE=2 SV=1 0 3 3 0.6029 0 1 1 1 411.53812 1232.5998 1232.60033 -0.44 -0.00018 0/0 0 0 2987127.25 HCD 30 MS2 11.87465 193.6 110 26.5562 4595 4595 4589 QEplus033719.raw F4 279.9 150.7 218.5 163 194.5 154.8 74 2.72 1 FALSE 0.0005556 0.008584 0.428 -250 5059 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHGGAGSAQR [K].vHGGAGSAQR.[M] N-Term(TMT6plex) 2 A0A1B0GSX6 PDZ and LIM domain protein 3 OS=Mus musculus OX=10090 GN=Pdlim3 PE=1 SV=1 A0A1B0GSX6; O70209 PDZ and LIM domain protein 3 OS=Mus musculus OX=10090 GN=Pdlim3 PE=1 SV=1; PDZ and LIM domain protein 3 OS=Mus musculus OX=10090 GN=Pdlim3 PE=1 SV=1 0 2 2 0.4225 0 1 1 1 584.82343 1168.63957 1168.63843 0.98 0.00057 0/0 0 0 207252.2813 HCD 30 MS2 0 18.3 110 26.5662 4599 4599 4589 QEplus033719.raw F4 52.5 5.8 10.7 21.9 9.3 9.4 158 1.42 1 FALSE 0.003101 0.06031 0.113 -250 5080 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HCECAEEGTR [K].hcEcAEEGTR.[N] N-Term(TMT6plex); C2(Carbamidomethyl); C4(Carbamidomethyl) 1 Q6ZQ38 Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2 Q6ZQ38 Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2 0 3 3 0.9097 0 1 1 1 493.21735 1477.63749 1477.63613 0.92 0.00045 0/0 0 0 13073865 HCD 30 MS2 10.50627 171.8 110 26.5786 4603 4603 4600 QEplus033719.raw F4 217.4 123.5 175.8 131.8 195 187.2 10 4.76 1 FALSE 1.14E-05 1.09E-06 1.231 -250 5094 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHVECAR [K].sHVEcAR.[F] N-Term(TMT6plex); C5(Carbamidomethyl) 2 Q3UKJ7 WD40 repeat-containing protein SMU1 OS=Mus musculus OX=10090 GN=Smu1 PE=2 SV=2 Q3UKJ7; Q3UKJ7-2 WD40 repeat-containing protein SMU1 OS=Mus musculus OX=10090 GN=Smu1 PE=2 SV=2; Isoform 2 of WD40 repeat-containing protein SMU1 OS=Mus musculus OX=10090 GN=Smu1 0 3 3 0.6604 0 1 1 1 363.18872 1087.55161 1087.55159 0.01 0.00001 0/0 0 0 1316877.125 HCD 30 MS2 23.00839 96 110 26.586 4606 4606 4600 QEplus033719.raw F4 214.1 60.4 91.7 67.9 68.9 73.1 64 2.68 1 FALSE 3.35E-05 0.001286 0.64 -250 5101 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HCECAEEGTR [K].hcEcAEEGTR.[N] N-Term(TMT6plex); C2(Carbamidomethyl); C4(Carbamidomethyl) 1 Q6ZQ38 Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2 Q6ZQ38 Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2 0 2 2 0.9365 0 1 1 1 739.32153 1477.63579 1477.63613 -0.23 -0.00017 0/0 0 0 1253771.625 HCD 30 MS2 0 88.4 110 26.5885 4607 4607 4600 QEplus033719.raw F4 88.8 74.2 89.3 76.7 117.8 83.6 9 3.62 1 FALSE 1.14E-05 4.27E-07 1.308 -250 5107 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGHAPGGHCPR [K].aGHAPGGHcPR.[Q] N-Term(TMT6plex); C9(Carbamidomethyl) 6 A0A0N4SUV6 Selenocysteine-specific elongation factor OS=Mus musculus OX=10090 GN=Eefsec PE=1 SV=1 A0A0N4SUV6; Q3TAF0; Q3UGH6; Q499X6; Q9JHW4; Q8BN64 "Selenocysteine-specific elongation factor OS=Mus musculus OX=10090 GN=Eefsec PE=1 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eefsec PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eefsec PE=2 SV=1; Eukaryotic elongation factor, selenocysteine-tRNA-specific OS=Mus musculus OX=10090 GN=Eefsec PE=2 SV=1; Selenocysteine-specific elongation factor OS=Mus musculus OX=10090 GN=Eefsec PE=1 SV=2; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eefsec PE=2 SV=1" 0 3 3 0.7866 0 1 1 1 449.229 1345.67246 1345.6745 -1.52 -0.00068 0/0 0 0 1213865.5 HCD 30 MS2 37.97778 74.8 110 26.591 4608 4608 4600 QEplus033719.raw F4 119.6 51.8 72.3 51.4 80 73.5 122 4.03 1 FALSE 1.14E-05 1.74E-07 1.382 -250 5116 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQAEPSERR [R].sQAEPSERR.[V] N-Term(TMT6plex) 1 Q9Z315 U4/U6.U5 tri-snRNP-associated protein 1 OS=Mus musculus OX=10090 GN=Sart1 PE=1 SV=1 Q9Z315 U4/U6.U5 tri-snRNP-associated protein 1 OS=Mus musculus OX=10090 GN=Sart1 PE=1 SV=1 1 3 3 0.5642 0 1 1 1 430.2319 1288.68116 1288.68069 0.36 0.00015 0/0 0 0 511116.7813 HCD 30 MS2 25.33656 68 110 26.5935 4609 4609 4600 QEplus033719.raw F4 89.4 48 76 64.4 81 49.2 244 3.58 1 FALSE 1.14E-05 4.84E-06 1.107 -250 5121 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRYNSDNDR [R].dRYNSDNDR.[S] N-Term(TMT6plex) 2 Q0VBL3 RNA-binding protein 15 OS=Mus musculus OX=10090 GN=Rbm15 PE=1 SV=1 Q0VBL3-2; Q0VBL3 Isoform 2 of RNA-binding protein 15 OS=Mus musculus OX=10090 GN=Rbm15; RNA-binding protein 15 OS=Mus musculus OX=10090 GN=Rbm15 PE=1 SV=1 1 3 3 0.4128 0 1 1 1 461.88644 1383.64478 1383.64504 -0.19 -0.00009 0/0 0 0 431451.7813 HCD 30 MS2 39.16613 46.5 110 26.596 4610 4610 4600 QEplus033719.raw F4 62 35.9 44.2 42.7 55.2 38.8 45 2.35 1 FALSE 0.0006216 0.009281 0.416 -250 5126 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTAPSDNR [R].gTAPSDNR.[V] N-Term(TMT6plex) 5 Q3UVN5 NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1 Q3KQQ1; Q9CZ44-2; Q3UVN5; Q9CZ44; A2AT02 NSFL1 cofactor p47 (Fragment) OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1; Isoform 2 of NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=1 SV=1; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=1 SV=1 0 2 2 0.5509 0 1 1 1 523.77521 1046.54314 1046.5428 0.32 0.00017 0/0 0 0 1008580 HCD 30 MS2 7.054014 93.5 110 26.6039 4612 4612 4611 QEplus033719.raw F4 172.1 64.6 110.2 60.9 53.8 99.5 97 2.16 1 FALSE 0.001473 0.02149 0.269 -250 5140 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQSNEHLRR [K].qQSNEHLRR.[Q] N-Term(TMT6plex) 5 Q3ULT2 Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1 A0A1L1SVJ6; A0A1L1SV25; Q3UDJ7; Q3ULT2; Q1A602 Alpha-actinin-4 (Fragment) OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Alpha-actinin-4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1 1 3 3 0.6717 0 1 1 1 466.25851 1396.76099 1396.76067 0.23 0.00011 0/0 0 0 4407859.5 HCD 30 MS2 3.664247 206.7 110 26.6089 4614 4614 4611 QEplus033719.raw F4 254.4 173.3 201.3 210.9 322 78.1 309 3.96 1 FALSE 1.14E-05 1.64E-07 1.387 -250 5147 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHREEMEAR [R].sHREEMEAR.[R] N-Term(TMT6plex) 2 Q08024 Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb PE=1 SV=1 Q08024; Q08024-4 Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb PE=1 SV=1; Isoform 4 of Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb 1 3 3 0.6217 0 1 1 1 458.56372 1373.67661 1373.67931 -1.97 -0.0009 0/0 0 0 3129914 HCD 30 MS2 41.33257 216.4 110 26.6114 4615 4615 4611 QEplus033719.raw F4 233.1 162.9 229.5 227.6 253.3 191.7 84 2.67 1 FALSE 1.14E-05 0.0002163 0.793 -250 5153 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDRGPGGPR [R].nDRGPGGPR.[G] N-Term(TMT6plex) 5 P97379 Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2 PE=1 SV=2 P97379; P97379-2; Q3U931; Q5DU21; Q3U6B1 Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2 PE=1 SV=2; Isoform B of Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2; Uncharacterized protein OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1; MKIAA0660 protein (Fragment) OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1 1 3 3 0.7233 0 1 1 1 385.54526 1154.62122 1154.62278 -1.36 -0.00052 0/0 0 0 2793828.5 HCD 30 MS2 14.06093 168.5 110 26.6139 4616 4616 4611 QEplus033719.raw F4 213.3 122.2 176.6 136.9 219.2 143 171 3.65 1 FALSE 1.14E-05 9.57E-06 1.051 -250 5155 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YQHDDGR [K].yQHDDGR.[V] N-Term(TMT6plex) 5 Q80X87 Glia maturation factor OS=Mus musculus OX=10090 GN=Gmfb PE=2 SV=1 Q80X87; A7VJ98; A0A2I3BPS1; A0A2I3BR94; Q9CQI3 Glia maturation factor OS=Mus musculus OX=10090 GN=Gmfb PE=2 SV=1; Glia maturation factor OS=Mus musculus OX=10090 GN=Gmfb PE=2 SV=1; Glia maturation factor beta (Fragment) OS=Mus musculus OX=10090 GN=Gmfb PE=1 SV=1; Glia maturation factor beta (Fragment) OS=Mus musculus OX=10090 GN=Gmfb PE=1 SV=1; Glia maturation factor beta OS=Mus musculus OX=10090 GN=Gmfb PE=1 SV=3 0 3 3 0.6711 0 1 1 1 373.85138 1119.53958 1119.53805 1.37 0.00051 0/0 0 0 1888392.75 HCD 30 MS2 37.39684 144.3 110 26.6163 4617 4617 4611 QEplus033719.raw F4 248.9 83.4 169.2 130.7 94.5 139.2 48 3.01 1 FALSE 0.0003996 0.007169 0.455 -250 5160 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHDMSER [R].gHDMSER.[A] N-Term(TMT6plex) 2 P70227 "Inositol 1,4,5-trisphosphate receptor type 3 OS=Mus musculus OX=10090 GN=Itpr3 PE=1 SV=3" Q0IJ80; P70227 "Itpr3 protein (Fragment) OS=Mus musculus OX=10090 GN=Itpr3 PE=2 SV=1; Inositol 1,4,5-trisphosphate receptor type 3 OS=Mus musculus OX=10090 GN=Itpr3 PE=1 SV=3" 0 3 3 0.8451 0 1 1 1 354.17291 1060.50418 1060.50431 -0.12 -0.00004 0/0 0 0 1361969.25 HCD 30 MS2 27.0446 66.5 110 26.6188 4618 4618 4611 QEplus033719.raw F4 95.1 56.3 84.6 55.3 55.5 52.1 21 2.84 1 FALSE 0.0006383 0.009859 0.407 -250 5175 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTEEGSSEDR [R].dTEEGSSEDR.[V] N-Term(TMT6plex) 4 B1ARU4 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 B1ARU4; E9QA63; Q9QXZ0; E9PVY8 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 2 2 0.8174 0 1 1 1 677.30219 1353.59709 1353.59675 0.26 0.00017 0/0 0 0 780150.8125 HCD 30 MS2 0 42.8 110 26.6238 4620 4620 4611 QEplus033719.raw F4 55.2 10.8 55.2 47.1 14.4 74.1 17 3.67 1 FALSE 1.14E-05 1.04E-07 1.424 -250 5178 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHVECAR [K].sHVEcAR.[F] N-Term(TMT6plex); C5(Carbamidomethyl) 2 Q3UKJ7 WD40 repeat-containing protein SMU1 OS=Mus musculus OX=10090 GN=Smu1 PE=2 SV=2 Q3UKJ7; Q3UKJ7-2 WD40 repeat-containing protein SMU1 OS=Mus musculus OX=10090 GN=Smu1 PE=2 SV=2; Isoform 2 of WD40 repeat-containing protein SMU1 OS=Mus musculus OX=10090 GN=Smu1 0 2 2 0.6303 0 1 1 1 544.2796 1087.55193 1087.55159 0.31 0.00017 0/0 0 0 528310.875 HCD 30 MS2 19.80096 57.5 110 26.6263 4621 4621 4611 QEplus033719.raw F4 123.7 33.7 62.6 47.4 33.4 44.1 72 2.38 1 FALSE 2.26E-05 0.001085 0.655 -250 5184 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YQHDDGR [K].yQHDDGR.[V] N-Term(TMT6plex) 5 Q80X87 Glia maturation factor OS=Mus musculus OX=10090 GN=Gmfb PE=2 SV=1 Q80X87; A7VJ98; A0A2I3BPS1; A0A2I3BR94; Q9CQI3 Glia maturation factor OS=Mus musculus OX=10090 GN=Gmfb PE=2 SV=1; Glia maturation factor OS=Mus musculus OX=10090 GN=Gmfb PE=2 SV=1; Glia maturation factor beta (Fragment) OS=Mus musculus OX=10090 GN=Gmfb PE=1 SV=1; Glia maturation factor beta (Fragment) OS=Mus musculus OX=10090 GN=Gmfb PE=1 SV=1; Glia maturation factor beta OS=Mus musculus OX=10090 GN=Gmfb PE=1 SV=3 0 2 2 0.6398 0 1 1 1 560.27338 1119.53948 1119.53805 1.27 0.00071 0/0 0 0 698338.0625 HCD 30 MS2 30.04025 63.6 110 26.6336 4623 4623 4622 QEplus033719.raw F4 109.7 45.2 78.9 48.5 40.3 58.9 48 2.36 1 FALSE 0.0001603 0.003511 0.542 -250 5187 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDRGPGGPR [R].nDRGPGGPR.[G] N-Term(TMT6plex) 5 P97379 Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2 PE=1 SV=2 P97379; P97379-2; Q3U931; Q5DU21; Q3U6B1 Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2 PE=1 SV=2; Isoform B of Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2; Uncharacterized protein OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1; MKIAA0660 protein (Fragment) OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1 1 2 2 0.5515 0 1 1 1 577.81689 1154.62651 1154.62278 3.23 0.00186 0/0 0 0 283222.0938 HCD 30 MS2 25.89384 18.9 110 26.6362 4624 4624 4622 QEplus033719.raw F4 24.6 13.7 20.1 13.8 22.5 18.9 154 1.36 1 FALSE 0.002173 0.04146 0.169 -250 5190 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQAQEEAER [K].rQAQEEAER.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.6094 0 1 1 1 449.23907 1345.70267 1345.70216 0.38 0.00017 0/0 0 0 3272282.25 HCD 30 MS2 37.32818 165.1 110 26.6387 4625 4625 4622 QEplus033719.raw F4 240.5 88.3 170.9 154 178.7 158 186 3.84 2 FALSE 1.14E-05 2.66E-07 1.347 -250 5210 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQHELEQR [K].hQHELEQR.[T] N-Term(TMT6plex) 2 Q8C9S4 Coiled-coil domain-containing protein 186 OS=Mus musculus OX=10090 GN=Ccdc186 PE=1 SV=2 Q8C9S4; F7CUD4 Coiled-coil domain-containing protein 186 OS=Mus musculus OX=10090 GN=Ccdc186 PE=1 SV=2; Coiled-coil domain-containing protein 186 (Fragment) OS=Mus musculus OX=10090 GN=Ccdc186 PE=1 SV=1 0 3 3 0.5389 0 1 1 1 435.9003 1305.68634 1305.68611 0.18 0.00008 0/0 0 0 836881.3125 HCD 30 MS2 30.74446 93.9 110 26.6461 4628 4628 4622 QEplus033719.raw F4 110.9 61.8 95.1 91.3 118.2 86.3 244 3.6 1 FALSE 1.14E-05 2.34E-06 1.167 -250 5217 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHREEMEAR [R].sHREEMEAR.[R] N-Term(TMT6plex) 2 Q08024 Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb PE=1 SV=1 Q08024; Q08024-4 Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb PE=1 SV=1; Isoform 4 of Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb 1 2 2 0.5434 0 1 1 1 687.34393 1373.68059 1373.67931 0.93 0.00064 0/0 0 0 470861.9688 HCD 30 MS2 18.72358 10.6 110 26.6486 4629 4629 4622 QEplus033719.raw F4 10.2 5.8 12.8 11.7 12.3 11 95 1.73 1 FALSE 0.001567 0.02386 0.252 -250 5244 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGSDTDVR [K].rGSDTDVR.[R] N-Term(TMT6plex) 6 P70336 Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1 Q6A035; P70336; A0A1Y7VMN0; P70336-2; F8VPK5; Q8CC95 Non-specific serine/threonine protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Rock2 PE=2 SV=1; Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1; Rho-associated protein kinase 2 (Fragment) OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1; Isoform 2 of Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2; Rho-associated protein kinase OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1; Non-specific serine/threonine protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Rock2 PE=2 SV=1 1 2 2 0.5135 0 1 1 1 567.80786 1134.60845 1134.60647 1.75 0.00099 0/0 0 0 284656.5313 HCD 30 MS2 0 12.2 110 26.6635 4634 4634 4633 QEplus033719.raw F4 20.5 7.4 7.6 10.4 11.4 15.8 237 2.22 1 FALSE 0.002071 0.03826 0.181 -250 5260 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERDAEQSSSPR [R].eRDAEQSSSPR.[T] N-Term(TMT6plex) 8 A0A1Y7VK55 Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfic PE=1 SV=1 P70255-4; P70255-7; P70255-5; P70255-6; A0A1Y7VK55; Q3UHA6; P70255; P70255-2 Isoform 4 of Nuclear factor 1 C-type OS=Mus musculus OX=10090 GN=Nfic; Isoform 7 of Nuclear factor 1 C-type OS=Mus musculus OX=10090 GN=Nfic; Isoform 5 of Nuclear factor 1 C-type OS=Mus musculus OX=10090 GN=Nfic; Isoform 6 of Nuclear factor 1 C-type OS=Mus musculus OX=10090 GN=Nfic; Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfic PE=1 SV=1; Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfic PE=2 SV=1; Nuclear factor 1 C-type OS=Mus musculus OX=10090 GN=Nfic PE=1 SV=1; Isoform 2 of Nuclear factor 1 C-type OS=Mus musculus OX=10090 GN=Nfic 1 3 3 0.658 0 1 1 1 497.58487 1490.74005 1490.73966 0.26 0.00013 0/0 0 0 1319598.125 HCD 30 MS2 7.054491 67.5 110 26.671 4637 4637 4633 QEplus033719.raw F4 70.6 52.4 70.9 57 86.6 67.3 163 3.45 1 FALSE 1.14E-05 8.03E-09 1.635 -250 5271 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTICHCR [K].rTIcHcR.[R] N-Term(TMT6plex); C4(Carbamidomethyl); C6(Carbamidomethyl) 1 Q8CHS8 Vacuolar protein sorting-associated protein 37A OS=Mus musculus OX=10090 GN=Vps37a PE=1 SV=1 Q8CHS8 Vacuolar protein sorting-associated protein 37A OS=Mus musculus OX=10090 GN=Vps37a PE=1 SV=1 1 3 3 0.6087 0 1 1 1 411.21637 1231.63456 1231.63495 -0.32 -0.00013 0/0 0 0 1081265.75 HCD 30 MS2 70.55261 108.6 110 26.6759 4639 4639 4633 QEplus033719.raw F4 166.4 83.4 107.7 96.8 101.4 95.7 143 2.3 1 FALSE 0.001359 0.0194 0.286 -250 5275 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NENESEAARR [R].nENESEAARR.[I] N-Term(TMT6plex) 2 Q3TDX2 Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Vps4a PE=2 SV=1 Q3TDX2; Q8VEJ9 Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Vps4a PE=2 SV=1; Vacuolar protein sorting-associated protein 4A OS=Mus musculus OX=10090 GN=Vps4a PE=1 SV=1 1 3 3 0.6667 0 1 1 1 468.90659 1404.7052 1404.70288 1.65 0.00077 0/0 0 0 846731.875 HCD 30 MS2 17.73029 84.6 110 26.6784 4640 4640 4633 QEplus033719.raw F4 92.6 57 92.2 82 108.2 75.4 156 3.96 1 FALSE 1.14E-05 8.34E-10 1.822 -250 5283 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NADDDRGPR [R].nADDDRGPR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.6667 0 1 1 1 415.54468 1244.61948 1244.61809 1.11 0.00046 0/0 0 0 605476.625 HCD 30 MS2 58.90755 65 110 26.6809 4641 4641 4633 QEplus033719.raw F4 79.7 45.8 76.5 55.3 69.4 63.1 102 2.16 1 FALSE 0.0002909 0.005944 0.48 -250 5296 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQSNEHLRR [K].qQSNEHLRR.[Q] N-Term(TMT6plex) 5 Q3ULT2 Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1 A0A1L1SVJ6; A0A1L1SV25; Q3UDJ7; Q3ULT2; Q1A602 Alpha-actinin-4 (Fragment) OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Alpha-actinin-4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1 1 2 2 0.4882 0 1 1 1 698.8847 1396.76213 1396.76067 1.04 0.00073 0/0 0 0 474203.5938 HCD 30 MS2 0 14.2 110 26.6859 4643 4643 4633 QEplus033719.raw F4 15.5 8.3 19.2 14.5 19.9 7.8 324 1.7 1 FALSE 0.006945 0.1102 -0.02 -250 5304 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NANDANSAAR [K].nANDANSAAR.[A] N-Term(TMT6plex) 6 A0A1S6GWH6 UBC core domain-containing protein OS=Mus musculus OX=10090 GN=Birc6 PE=2 SV=1 A0A1S6GWH6; O88738-2; O88738; O88738-3; S4R2P8; S4R1L5 UBC core domain-containing protein OS=Mus musculus OX=10090 GN=Birc6 PE=2 SV=1; Isoform 2 of Baculoviral IAP repeat-containing protein 6 OS=Mus musculus OX=10090 GN=Birc6; Baculoviral IAP repeat-containing protein 6 OS=Mus musculus OX=10090 GN=Birc6 PE=1 SV=2; Isoform 3 of Baculoviral IAP repeat-containing protein 6 OS=Mus musculus OX=10090 GN=Birc6; Baculoviral IAP repeat-containing protein 6 OS=Mus musculus OX=10090 GN=Birc6 PE=1 SV=1; Baculoviral IAP repeat-containing protein 6 OS=Mus musculus OX=10090 GN=Birc6 PE=1 SV=1 0 2 2 0.642 0 1 1 1 616.81415 1232.62102 1232.61809 2.37 0.00146 0/0 0 0 208270.3906 HCD 30 MS2 29.40683 15.8 110 26.6938 4645 4645 4644 QEplus033719.raw F4 30.1 8.6 20.5 8.4 14 13.2 112 1.76 1 FALSE 0.001506 0.02247 0.261 -250 5309 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSQTGTESGAAR [R].sSQTGTESGAAR.[T] N-Term(TMT6plex) 4 A2AH22 Activating molecule in BECN1-regulated autophagy protein 1 OS=Mus musculus OX=10090 GN=Ambra1 PE=1 SV=1 A2AH22-2; A2AH22; A2AH22-6; A2AH22-7 Isoform 2 of Activating molecule in BECN1-regulated autophagy protein 1 OS=Mus musculus OX=10090 GN=Ambra1; Activating molecule in BECN1-regulated autophagy protein 1 OS=Mus musculus OX=10090 GN=Ambra1 PE=1 SV=1; Isoform 6 of Activating molecule in BECN1-regulated autophagy protein 1 OS=Mus musculus OX=10090 GN=Ambra1; Isoform 7 of Activating molecule in BECN1-regulated autophagy protein 1 OS=Mus musculus OX=10090 GN=Ambra1 0 2 2 0.5874 0 1 1 1 690.84991 1380.69255 1380.69165 0.65 0.00045 0/0 0 0 427652.9688 HCD 30 MS2 0 22.6 110 26.6963 4646 4646 4644 QEplus033719.raw F4 23 17.3 25.1 20.7 30.6 18.8 133 2.86 1 FALSE 1.14E-05 3.52E-06 1.134 -250 5317 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEAEAARR [R].sEAEAARR.[A] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.5457 0 1 1 1 373.54245 1118.6128 1118.61155 1.11 0.00042 0/0 0 0 8303893 HCD 30 MS2 37.22139 324.5 92.707 26.6985 4647 4647 4644 QEplus033719.raw F4 747 171.8 341.6 276.8 146.5 263.5 285 3.5 2 FALSE 1.14E-05 0.0004992 0.722 -250 5323 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERDEIRHDR [R].eRDEIRHDR.[R] N-Term(TMT6plex) 3 A0A0B4J1E2 SNW domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snw1 PE=1 SV=1 A0A0B4J1E2; Q9CV75; Q9CSN1 SNW domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snw1 PE=1 SV=1; SNW domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Snw1 PE=2 SV=1; SNW domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snw1 PE=1 SV=3 2 4 4 0.4804 0 1 1 1 364.44711 1454.76662 1454.76615 0.32 0.00012 0/0 0 0 4297405.5 HCD 30 MS2 18.14221 134.3 110 26.701 4648 4648 4644 QEplus033719.raw F4 169.4 128.5 129 94 172.7 112.2 235 3.06 1 FALSE 1.14E-05 6.26E-06 1.086 -250 5331 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEAEAARR [R].sEAEAARR.[A] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.2908 0 1 1 1 559.80945 1118.61162 1118.61155 0.06 0.00003 0/0 0 0 740310.9375 HCD 30 MS2 46.71649 74.7 110 26.706 4650 4650 4644 QEplus033719.raw F4 147.3 46.5 85.8 67.8 40.4 60.4 267 1.96 2 FALSE 0.0005373 0.008163 0.436 -250 5338 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAQSEETR [R].tAQSEETR.[V] N-Term(TMT6plex) 5 P11798 Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Mus musculus OX=10090 GN=Camk2a PE=1 SV=2 P11798; F8WHB5; P11798-2; Q80TN1; F8WIS9 Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Mus musculus OX=10090 GN=Camk2a PE=1 SV=2; Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Mus musculus OX=10090 GN=Camk2a PE=1 SV=1; Isoform Alpha KAP of Calcium/calmodulin-dependent protein kinase type II subunit alpha OS=Mus musculus OX=10090 GN=Camk2a; Calcium/calmodulin-dependent protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Camk2a PE=2 SV=3; Calcium/calmodulin-dependent protein kinase OS=Mus musculus OX=10090 GN=Camk2a PE=1 SV=1 0 2 2 0.6098 0 1 1 1 575.79895 1150.59062 1150.59015 0.41 0.00024 0/0 0 0 631608.75 HCD 30 MS2 0 51.8 110 26.7085 4651 4651 4644 QEplus033719.raw F4 100.4 7.2 54.1 56.8 3.7 88.6 174 2.87 1 FALSE 1.14E-05 8.80E-05 0.868 -250 5345 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRSDYAR [K].qRSDYAR.[E] N-Term(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 2 2 0.3909 0 1 1 1 562.80341 1124.59953 1124.60099 -1.29 -0.00073 0/0 0 0 429394.125 HCD 30 MS2 32.80552 50.1 110 26.7135 4653 4653 4644 QEplus033719.raw F4 81.3 16.9 35.1 74.6 27.3 65.5 155 2.2 1 FALSE 0.004271 0.07841 0.066 -250 5352 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRGEAASSSEPR [R].gRGEAASSSEPR.[Y] N-Term(TMT6plex) 6 B1AXU4 E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus OX=10090 GN=Pja1 PE=1 SV=1 B1AXU4; Q3UXQ1; B1AXU3; O55176; O55176-2; A0JLS7 E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus OX=10090 GN=Pja1 PE=1 SV=1; RING-type domain-containing protein OS=Mus musculus OX=10090 GN=Pja1 PE=2 SV=1; E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus OX=10090 GN=Pja1 PE=1 SV=1; E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus OX=10090 GN=Pja1 PE=1 SV=3; Isoform 2 of E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus OX=10090 GN=Pja1; Pja1 protein (Fragment) OS=Mus musculus OX=10090 GN=Pja1 PE=2 SV=1 1 3 3 0.6026 0 1 1 1 478.25003 1432.73554 1432.73418 0.94 0.00045 0/0 0 0 366557.7188 HCD 30 MS2 30.33969 28.4 110 26.716 4654 4654 4644 QEplus033719.raw F4 43 19.5 26.6 20.8 35.1 25.4 238 3.07 1 FALSE 3.35E-05 0.001164 0.649 -250 5356 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQQEEQAR [K].eQQEEQAR.[L] N-Term(TMT6plex) 6 B9EKB0 Laminin B1 subunit 1 OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1 B9EKB0; Q9CRX6; E9QN70; P02469; Q3UHL7; Q8K271 Laminin B1 subunit 1 OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1; Laminin subunit beta-1 OS=Mus musculus OX=10090 GN=Lamb1 PE=1 SV=1; Laminin subunit beta-1 OS=Mus musculus OX=10090 GN=Lamb1 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1; Lamb1-1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=2 0 2 2 0.6645 0 1 1 1 623.81531 1246.62334 1246.62251 0.67 0.00041 0/0 0 0 1615056.25 HCD 30 MS2 5.290267 88.8 110 26.7233 4656 4656 4655 QEplus033719.raw F4 125.6 76 128 58.3 58 87.2 101 3.04 1 FALSE 1.14E-05 2.12E-05 0.985 -250 5362 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGQEVQHSDR [K].dGQEVQHSDR.[V] N-Term(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.7373 0 1 1 1 467.23038 1399.67658 1399.67634 0.17 0.00008 0/0 0 0 5174947.5 HCD 30 MS2 16.91264 144.6 110 26.7283 4658 4658 4655 QEplus033719.raw F4 196.5 67.5 121 197.3 130.1 155.4 70 4.53 2 FALSE 1.14E-05 1.13E-07 1.418 -250 5366 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGQEVQHSDR [K].dGQEVQHSDR.[V] N-Term(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.6058 0 1 1 1 700.34131 1399.67534 1399.67634 -0.71 -0.0005 0/0 0 0 353053.2813 HCD 30 MS2 19.78158 24.9 110 26.7309 4659 4659 4655 QEplus033719.raw F4 37.9 6.2 20.4 46.2 6.1 32.4 68 2.74 2 FALSE 1.14E-05 0.0004827 0.725 -250 5408 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDYRNDQR [R].nDYRNDQR.[N] N-Term(TMT6plex) 3 Q8BQ46 "TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1" Q8BQ46; Q3TLE4; F6QCI0 "TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Taf15 PE=2 SV=1; TATA-box-binding protein-associated factor 15 (Fragment) OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1" 1 3 3 0.5 0 1 1 1 437.21982 1309.6449 1309.64464 0.2 0.00009 0/0 0 0 1486081.375 HCD 30 MS2 22.07991 124.8 110 26.7634 4669 4669 4668 QEplus033719.raw F4 180.6 117.4 131 71.6 169.1 79 98 2.12 1 FALSE 0.0023 0.04568 0.155 -250 5415 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRSDYAR [K].qRSDYAR.[E] N-Term(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 3 3 0.4721 0 1 1 1 375.53891 1124.60218 1124.60099 1.06 0.0004 0/0 0 0 25212808 HCD 30 MS2 3.873019 369.5 45.027 26.7657 4670 4670 4668 QEplus033719.raw F4 659.8 34.1 283.5 804.1 26.6 408.9 146 3.05 1 FALSE 0.0002909 0.005955 0.48 -250 5422 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SENESEAARR [R].sENESEAARR.[I] N-Term(TMT6plex) 2 Q3TN07 Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Vps4b PE=1 SV=1 Q3TN07; Q3U8P5 Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Vps4b PE=1 SV=1; Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Vps4b PE=2 SV=1 1 3 3 0.6177 0 1 1 1 459.9021 1377.69175 1377.69199 -0.17 -0.00008 0/0 0 0 2705922 HCD 30 MS2 8.37687 137.9 110 26.7682 4671 4671 4668 QEplus033719.raw F4 153.7 118.5 140.2 123.5 183.6 108.2 157 3.61 1 FALSE 1.14E-05 1.71E-08 1.573 -250 5433 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEEDAQR [R].aEEDAQR.[F] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.2402 0 1 1 1 524.26563 1047.52397 1047.52682 -2.72 -0.00142 0/0 0 0 789596.5625 HCD 30 MS2 38.02066 113.5 110 26.7732 4673 4673 4668 QEplus033719.raw F4 239.5 78.9 122 60.1 54.6 125.8 85 2.54 2 FALSE 9.73E-05 0.003012 0.558 -250 5439 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSSGSSTVQR [K].gSSGSSTVQR.[S] N-Term(TMT6plex) 1 Q8BGB5 LIM domain-containing protein 2 OS=Mus musculus OX=10090 GN=Limd2 PE=1 SV=1 Q8BGB5 LIM domain-containing protein 2 OS=Mus musculus OX=10090 GN=Limd2 PE=1 SV=1 0 2 2 0.6089 0 1 1 1 597.81903 1194.63078 1194.62759 2.67 0.0016 0/0 0 0 289056.125 HCD 30 MS2 0 38.2 110 26.7757 4674 4674 4668 QEplus033719.raw F4 56.4 37.3 51.5 17.1 39.5 27.1 185 2.48 1 FALSE 1.14E-05 5.67E-05 0.904 -250 5448 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMQGAGTQER [K].amQGAGTQER.[V] N-Term(TMT6plex); M2(Oxidation) 7 Q922A2 Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1 Q922A2; Q3UYL7; Q07076; Q3TJ49; A0A2C9F2D2; Q8BP75; Q8CCV9 Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1; Annexin A7 OS=Mus musculus OX=10090 GN=Anxa7 PE=1 SV=2; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1 0 2 2 0.4742 0 1 1 1 647.32336 1293.63945 1293.64187 -1.87 -0.00121 0/0 0 0 265248.5313 HCD 30 MS2 11.08807 34.5 110 26.7807 4676 4676 4668 QEplus033719.raw F4 39.9 24.2 37.5 35.3 27.9 42.4 122 2.13 1 FALSE 5.44E-05 0.002329 0.584 -250 5455 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHQVASSQDR [R].aHQVASSQDR.[V] N-Term(TMT6plex) 4 Q91YR5 eEF1A lysine and N-terminal methyltransferase OS=Mus musculus OX=10090 GN=EEF1AKNMT PE=1 SV=1 Q91YR5; Q3TRF3; Q91YR5-1; Q91YR5-2 eEF1A lysine and N-terminal methyltransferase OS=Mus musculus OX=10090 GN=EEF1AKNMT PE=1 SV=1; Methyltransf_11 domain-containing protein OS=Mus musculus OX=10090 GN=Eef1aknmt PE=2 SV=1; Isoform 2 of eEF1A lysine and N-terminal methyltransferase OS=Mus musculus OX=10090 GN=EEF1AKNMT; Isoform 3 of eEF1A lysine and N-terminal methyltransferase OS=Mus musculus OX=10090 GN=EEF1AKNMT 0 3 3 0.737 0 1 1 1 443.23602 1327.69352 1327.69159 1.45 0.00064 0/0 0 0 1245376.625 HCD 30 MS2 21.0906 37.1 110 26.7857 4678 4678 4668 QEplus033719.raw F4 52.5 25.2 35.5 35.8 52.6 21 149 3.46 1 FALSE 1.14E-05 1.43E-06 1.208 -250 5476 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEESADARR [K].tEESADARR.[K] N-Term(TMT6plex) 7 B9EKB0 Laminin B1 subunit 1 OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1 B9EKB0; Q9CRX6; Q3UR38; E9QN70; P02469; Q3UHL7; Q8K271 Laminin B1 subunit 1 OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1; Laminin subunit beta-1 OS=Mus musculus OX=10090 GN=Lamb1 PE=1 SV=1; Laminin subunit beta-1 OS=Mus musculus OX=10090 GN=Lamb1 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1; Lamb1-1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=2 1 3 3 0.6264 0 1 1 1 421.88849 1263.65091 1263.64906 1.47 0.00062 0/0 0 0 523409.25 HCD 30 MS2 27.07996 67.2 110 26.8031 4684 4684 4679 QEplus033719.raw F4 94.5 59.1 81.6 58.2 51.4 58.6 193 3.56 1 FALSE 1.14E-05 2.64E-08 1.537 -250 5494 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SENESEAARR [R].sENESEAARR.[I] N-Term(TMT6plex) 2 Q3TN07 Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Vps4b PE=1 SV=1 Q3TN07; Q3U8P5 Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Vps4b PE=1 SV=1; Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Vps4b PE=2 SV=1 1 2 2 0.5196 0 1 1 1 689.34985 1377.69243 1377.69199 0.32 0.00022 0/0 0 0 553581 HCD 30 MS2 9.485356 22.8 110 26.8229 4691 4691 4690 QEplus033719.raw F4 23.4 17.2 25.3 20.9 30.6 19.3 151 3.06 1 FALSE 0.0003408 0.006539 0.467 -250 5517 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHYAER [K].gHYAER.[V] N-Term(TMT6plex) 1 P27661 Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 P27661 Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 0 2 2 0.5306 0 1 1 1 481.25513 961.50298 961.50529 -2.41 -0.00116 0/0 0 0 1379954 HCD 30 MS2 0 233.5 110 26.8304 4694 4694 4690 QEplus033719.raw F4 463.8 181.5 257.2 149.2 130.9 218.3 63 2.45 1 FALSE 0.003321 0.06446 0.102 -250 5534 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVENERR [K].qVENERR.[E] N-Term(TMT6plex) 3 Q3TUQ5 Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=1 Q3TUQ5; O35691; Q9CV89 Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=1; Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=4; Pinin (Fragment) OS=Mus musculus OX=10090 GN=Pnn PE=2 SV=1 1 3 3 0.4414 0 1 1 1 387.21732 1159.63739 1159.6381 -0.61 -0.00024 0/0 0 0 906292.5 HCD 30 MS2 21.89032 82.5 110 26.8379 4697 4697 4690 QEplus033719.raw F4 183.7 48.8 86.4 53.4 48.4 74 286 2.56 1 FALSE 3.35E-05 0.00128 0.64 -250 5537 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTGSCASTSR [K].tTGScASTSR.[R] N-Term(TMT6plex); C5(Carbamidomethyl) 5 A0A087WNZ7 E3 ubiquitin-protein ligase TRIP12 OS=Mus musculus OX=10090 GN=Trip12 PE=1 SV=1 A0A087WP92; A0A087WNZ7; G5E870; A0A087WSG4; A0A0B4J1N9 E3 ubiquitin-protein ligase TRIP12 (Fragment) OS=Mus musculus OX=10090 GN=Trip12 PE=1 SV=1; E3 ubiquitin-protein ligase TRIP12 OS=Mus musculus OX=10090 GN=Trip12 PE=1 SV=1; E3 ubiquitin-protein ligase TRIP12 OS=Mus musculus OX=10090 GN=Trip12 PE=1 SV=1; E3 ubiquitin-protein ligase TRIP12 (Fragment) OS=Mus musculus OX=10090 GN=Trip12 PE=1 SV=1; HECT-type E3 ubiquitin transferase (Fragment) OS=Mus musculus OX=10090 GN=Trip12 PE=1 SV=5 0 2 2 0.776 0 1 1 1 628.80872 1256.61016 1256.61023 -0.06 -0.00004 0/0 0 0 611923.4375 HCD 30 MS2 5.787091 45.8 110 26.8404 4698 4698 4690 QEplus033719.raw F4 70.8 40.9 57.5 29.6 31.6 44.3 70 3.17 1 FALSE 1.14E-05 3.32E-07 1.328 -250 5558 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQAQEEAER [K].rQAQEEAER.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.604 0 1 1 1 673.35535 1345.70342 1345.70216 0.94 0.00063 0/0 0 0 1621133.625 HCD 30 MS2 3.814945 24.1 110 26.8533 4702 4702 4701 QEplus033719.raw F4 38 12 25.2 28.1 19.6 21.6 202 3.03 2 FALSE 1.14E-05 4.37E-07 1.306 -250 5560 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQVHEGR [R].tQVHEGR.[T] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 3 3 0.6012 0 1 1 1 352.53162 1055.5803 1055.57952 0.73 0.00026 0/0 0 0 6125786 HCD 30 MS2 24.91664 229.4 110 26.8558 4703 4703 4701 QEplus033719.raw F4 442.7 131.7 251.4 199.2 145.9 205.7 136 3.36 2 FALSE 1.14E-05 0.000502 0.722 -250 5566 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERQPARPQNER [K].eRQPARPQNER.[A] N-Term(TMT6plex) 4 A0A1Y7VLZ7 Phosphofurin acidic cluster sorting protein 2 OS=Mus musculus OX=10090 GN=Pacs2 PE=1 SV=1 A0A1Y7VLZ7; E9Q7E9; Q3V3Q7; Q3V3Y3 Phosphofurin acidic cluster sorting protein 2 OS=Mus musculus OX=10090 GN=Pacs2 PE=1 SV=1; Phosphofurin acidic cluster sorting protein 2 OS=Mus musculus OX=10090 GN=Pacs2 PE=1 SV=1; Phosphofurin acidic cluster sorting protein 2 OS=Mus musculus OX=10090 GN=Pacs2 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pacs2 PE=2 SV=1 1 3 3 0.5204 0 1 1 1 537.29626 1609.87424 1609.87202 1.38 0.00074 0/0 0 0 2176319.5 HCD 30 MS2 49.13428 77.2 110 26.8583 4704 4704 4701 QEplus033719.raw F4 79.3 67 90.8 50.2 102.6 73.1 365 2.69 1 FALSE 0.005197 0.0889 0.037 -250 5590 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQVHEGR [R].tQVHEGR.[T] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.557 0 1 1 1 528.29395 1055.58061 1055.57952 1.03 0.00055 0/0 0 0 732201.0625 HCD 30 MS2 13.33179 127.9 110 26.8708 4709 4709 4701 QEplus033719.raw F4 272.4 64.9 142.9 118.5 53 115.5 142 2.37 2 FALSE 5.44E-05 0.001747 0.611 -250 5594 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQHDAQVR [R].eQHDAQVR.[L] N-Term(TMT6plex) 2 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 P14733; Q8C553 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3; IF rod domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Lmnb1 PE=2 SV=1 0 2 2 0.6351 0 1 1 1 606.32123 1211.63518 1211.63301 1.79 0.00108 0/0 0 0 725786.5625 HCD 30 MS2 7.084715 92.6 110 26.8733 4710 4710 4701 QEplus033719.raw F4 141.2 80.9 107.4 77.3 82.9 65.6 180 2.85 1 FALSE 1.14E-05 2.25E-05 0.98 -250 5601 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGSGGGSSGGGGAGPGGR [K].tGSGGGSSGGGGAGPGGR.[T] N-Term(TMT6plex) 3 Q5DTJ4 MKIAA4178 protein (Fragment) OS=Mus musculus OX=10090 GN=Prrc2a PE=2 SV=1 G3UX48; Q5DTJ4; Q7TSC1 Protein PRRC2A OS=Mus musculus OX=10090 GN=Prrc2a PE=1 SV=1; MKIAA4178 protein (Fragment) OS=Mus musculus OX=10090 GN=Prrc2a PE=2 SV=1; Protein PRRC2A OS=Mus musculus OX=10090 GN=Prrc2a PE=1 SV=1 0 2 2 0.7585 0 1 1 1 781.38019 1561.7531 1561.75163 0.94 0.00074 0/0 0 0 1411193.625 HCD 30 MS2 0 76.2 110 26.8832 4713 4713 4712 QEplus033719.raw F4 96.2 62 82.4 53.7 103.4 59.7 95 5.59 1 FALSE 1.14E-05 6.31E-16 3.739 -250 5619 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSSNLQSR [R].rSSNLQSR.[S] N-Term(TMT6plex) 7 E9PYJ9; Q9JKS4 LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1;LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1 Q9JKS4-3; E9PYJ9; Q9JKS4-6; Q9JKS4; Q9JKS4-5; Q9JKS4-4; Q9JKS4-2 Isoform 3 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3; LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1; Isoform 6 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3; LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1; Isoform 5 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3; Isoform 4 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3; Isoform 2 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 1 3 3 0.5413 0 1 1 1 392.89297 1176.66437 1176.66465 -0.24 -0.00009 0/0 0 0 4021701.75 HCD 30 MS2 20.12475 139.5 110 26.8906 4716 4716 4712 QEplus033719.raw F4 321 38.1 112.2 167.4 41.7 156.4 332 3.75 2 FALSE 1.14E-05 4.57E-06 1.112 -250 5631 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGSGSESTGAEER [K].sGSGSESTGAEER.[S] N-Term(TMT6plex) 5 A0A087WNZ7 E3 ubiquitin-protein ligase TRIP12 OS=Mus musculus OX=10090 GN=Trip12 PE=1 SV=1 A0A087WP92; A0A087WNZ7; A0A087WQ02; G5E870; A0A0B4J1N9 E3 ubiquitin-protein ligase TRIP12 (Fragment) OS=Mus musculus OX=10090 GN=Trip12 PE=1 SV=1; E3 ubiquitin-protein ligase TRIP12 OS=Mus musculus OX=10090 GN=Trip12 PE=1 SV=1; E3 ubiquitin-protein ligase TRIP12 OS=Mus musculus OX=10090 GN=Trip12 PE=1 SV=1; E3 ubiquitin-protein ligase TRIP12 OS=Mus musculus OX=10090 GN=Trip12 PE=1 SV=1; HECT-type E3 ubiquitin transferase (Fragment) OS=Mus musculus OX=10090 GN=Trip12 PE=1 SV=5 0 2 2 0.5892 0 1 1 1 741.84735 1482.68743 1482.68696 0.31 0.00023 0/0 0 0 1805103.5 HCD 30 MS2 5.479908 88.1 110 26.8956 4718 4718 4712 QEplus033719.raw F4 89.9 93.5 79.4 62.7 131.9 71 44 4.43 1 FALSE 1.14E-05 5.06E-14 2.623 -250 5651 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTPSGTQSSR [R].gTPSGTQSSR.[E] N-Term(TMT6plex) 6 A0A1S6GWH6 UBC core domain-containing protein OS=Mus musculus OX=10090 GN=Birc6 PE=2 SV=1 A0A1S6GWH6; O88738-2; O88738; O88738-3; S4R2P8; S4R1L5 UBC core domain-containing protein OS=Mus musculus OX=10090 GN=Birc6 PE=2 SV=1; Isoform 2 of Baculoviral IAP repeat-containing protein 6 OS=Mus musculus OX=10090 GN=Birc6; Baculoviral IAP repeat-containing protein 6 OS=Mus musculus OX=10090 GN=Birc6 PE=1 SV=2; Isoform 3 of Baculoviral IAP repeat-containing protein 6 OS=Mus musculus OX=10090 GN=Birc6; Baculoviral IAP repeat-containing protein 6 OS=Mus musculus OX=10090 GN=Birc6 PE=1 SV=1; Baculoviral IAP repeat-containing protein 6 OS=Mus musculus OX=10090 GN=Birc6 PE=1 SV=1 0 2 2 0.5176 0 1 1 1 603.81909 1206.63091 1206.62759 2.75 0.00166 0/0 0 0 1165292 HCD 30 MS2 23.81026 84.2 110 26.9031 4721 4721 4712 QEplus033719.raw F4 127.3 64.6 90.6 66.4 79.5 76.5 208 2.55 1 FALSE 1.14E-05 9.63E-05 0.86 -250 5659 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDDDYRGGGDR [R].rDDDYRGGGDR.[Y] N-Term(TMT6plex) 8 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 2 3 3 0.5617 0 1 1 1 504.24475 1510.7197 1510.7196 0.07 0.00003 0/0 0 0 1101778.125 HCD 30 MS2 28.40571 55.8 110 26.9056 4722 4722 4712 QEplus033719.raw F4 56.4 52.9 58.6 45.2 62.7 58.9 58 3.08 1 FALSE 1.14E-05 0.0007975 0.682 -250 5673 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSGGREDSESPGTQR [K].sSGGREDSESPGTQR.[S] N-Term(TMT6plex) 1 P97825 Jupiter microtubule associated homolog 1 OS=Mus musculus OX=10090 GN=Jpt1 PE=1 SV=3 P97825 Jupiter microtubule associated homolog 1 OS=Mus musculus OX=10090 GN=Jpt1 PE=1 SV=3 1 3 3 0.7199 0 1 1 1 593.62097 1778.84836 1778.84665 0.96 0.00057 0/0 0 0 7427900 HCD 30 MS2 3.386612 166.7 110 26.9179 4726 4726 4723 QEplus033719.raw F4 189.9 102.9 182.1 156.5 159.6 209.2 91 4.07 1 FALSE 1.14E-05 5.27E-14 2.62 -250 5680 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGSGGGSSGGGGAGPGGR [K].tGSGGGSSGGGGAGPGGR.[T] N-Term(TMT6plex) 3 Q5DTJ4 MKIAA4178 protein (Fragment) OS=Mus musculus OX=10090 GN=Prrc2a PE=2 SV=1 G3UX48; Q5DTJ4; Q7TSC1 Protein PRRC2A OS=Mus musculus OX=10090 GN=Prrc2a PE=1 SV=1; MKIAA4178 protein (Fragment) OS=Mus musculus OX=10090 GN=Prrc2a PE=2 SV=1; Protein PRRC2A OS=Mus musculus OX=10090 GN=Prrc2a PE=1 SV=1 0 3 3 0.843 0 1 1 1 521.25592 1561.75321 1561.75163 1.01 0.00053 0/0 0 0 1932137.375 HCD 30 MS2 11.80152 47.2 110 26.9204 4727 4727 4723 QEplus033719.raw F4 70.5 34.8 44.4 41.5 49.2 43 95 7.96 1 FALSE 1.14E-05 6.31E-16 4.23 -250 5684 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHENCDQSMR [K].sHENcDQSMR.[E] N-Term(TMT6plex); C5(Carbamidomethyl) 4 A0A2I3BQE0 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Stk3 PE=1 SV=1 A0A2I3BQE0; Q9JI10-2; Q9CW82; Q9JI10 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Stk3 PE=1 SV=1; Isoform 2 of Serine/threonine-protein kinase 3 OS=Mus musculus OX=10090 GN=Stk3; Non-specific serine/threonine protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Stk3 PE=2 SV=1; Serine/threonine-protein kinase 3 OS=Mus musculus OX=10090 GN=Stk3 PE=1 SV=1 0 3 3 0.8966 0 1 1 1 498.22095 1492.64829 1492.64703 0.85 0.00042 0/0 0 0 1861430.25 HCD 30 MS2 18.76797 61 110 26.9229 4728 4728 4723 QEplus033719.raw F4 79.6 48.1 65 60.2 63.5 49.4 14 5.03 1 FALSE 1.14E-05 1.03E-07 1.425 -250 5690 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERGDINHER [K].eRGDINHER.[G] N-Term(TMT6plex) 4 Q3TV47 Sodium/potassium-transporting ATPase subunit beta OS=Mus musculus OX=10090 GN=Atp1b1 PE=2 SV=1 A0A0A6YX05; Q3TV47; Q3TSQ1; Q545P0 Sodium/potassium-transporting ATPase subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Atp1b1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit beta OS=Mus musculus OX=10090 GN=Atp1b1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit beta OS=Mus musculus OX=10090 GN=Atp1b1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit beta OS=Mus musculus OX=10090 GN=Atp1b1 PE=1 SV=1 1 3 3 0.568 0 1 1 1 452.23938 1354.70359 1354.70249 0.81 0.00037 0/0 0 0 971271.9375 HCD 30 MS2 45.70853 121.4 110 26.9254 4729 4729 4723 QEplus033719.raw F4 158.1 95.5 125.2 143 88.3 118.4 229 3.75 1 FALSE 1.14E-05 0.0009572 0.666 -250 5697 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRPGPQTR [K].nRPGPQTR.[S] N-Term(TMT6plex) 2 Q8CIG8 Protein arginine N-methyltransferase 5 OS=Mus musculus OX=10090 GN=Prmt5 PE=1 SV=3 A0A0R4J049; Q8CIG8 Protein arginine N-methyltransferase 5 OS=Mus musculus OX=10090 GN=Prmt5 PE=1 SV=1; Protein arginine N-methyltransferase 5 OS=Mus musculus OX=10090 GN=Prmt5 PE=1 SV=3 0 3 3 0.6449 0 1 1 1 385.55817 1154.65995 1154.65917 0.67 0.00026 0/0 0 0 808127.4375 HCD 30 MS2 35.30918 97.5 110 26.9279 4730 4730 4723 QEplus033719.raw F4 118.2 64.4 109.1 91.4 105.2 97 150 3.21 1 FALSE 0.000565 0.008653 0.427 -250 5702 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSSNLQSR [R].rSSNLQSR.[S] N-Term(TMT6plex) 7 E9PYJ9; Q9JKS4 LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1;LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1 Q9JKS4-3; E9PYJ9; Q9JKS4-6; Q9JKS4; Q9JKS4-5; Q9JKS4-4; Q9JKS4-2 Isoform 3 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3; LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1; Isoform 6 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3; LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1; Isoform 5 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3; Isoform 4 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3; Isoform 2 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 1 2 2 0.2192 0 1 1 1 588.83655 1176.66582 1176.66465 0.99 0.00059 0/0 0 0 700174.25 HCD 30 MS2 0 26.3 110 26.9304 4731 4731 4723 QEplus033719.raw F4 44.4 10.1 29.9 28.2 18.6 26.4 308 1.46 2 FALSE 0.007932 0.1318 -0.062 -250 5717 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQNETEER [K].eQNETEER.[S] N-Term(TMT6plex) 11 A0A0N4SV80 Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Zfp638 PE=1 SV=1 Q99LP9; Q61464-4; A0A0N4SV80; Q61464; Q61464-2; A0A0N4SVI8; E9QML5; E9QKZ7; Q61464-7; Q61464-5; A0A0N4SV38 Zfml protein OS=Mus musculus OX=10090 GN=Zfp638 PE=2 SV=1; Isoform 4 of Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Znf638; Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Zfp638 PE=1 SV=1; Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Znf638 PE=1 SV=2; Isoform 2 of Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Znf638; Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Zfp638 PE=1 SV=1; Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Zfp638 PE=1 SV=2; Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Zfp638 PE=1 SV=1; Isoform 6 of Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Znf638; Isoform 5 of Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Znf638; Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Zfp638 PE=1 SV=1 0 2 2 0.6486 0 1 1 1 632.30432 1263.60137 1263.60144 -0.06 -0.00004 0/0 0 0 427133.3125 HCD 30 MS2 0 41 110 26.9355 4733 4733 4723 QEplus033719.raw F4 48.7 33.1 48.8 28.1 46 41.1 68 3.13 1 FALSE 1.14E-05 2.65E-05 0.967 -250 5743 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YQEQHR [R].yQEQHR.[S] N-Term(TMT6plex) 3 Q62418 Drebrin-like protein OS=Mus musculus OX=10090 GN=Dbnl PE=1 SV=2 Q62418; Q62418-2; Q62418-3 Drebrin-like protein OS=Mus musculus OX=10090 GN=Dbnl PE=1 SV=2; Isoform 2 of Drebrin-like protein OS=Mus musculus OX=10090 GN=Dbnl; Isoform 3 of Drebrin-like protein OS=Mus musculus OX=10090 GN=Dbnl 0 3 3 0.2154 0 1 1 1 363.85947 1089.56385 1089.56387 -0.02 -0.00001 0/0 0 0 2010679.125 HCD 30 MS2 25.2264 102.4 110 26.9503 4738 4738 4734 QEplus033719.raw F4 177.7 64.7 104.1 89.4 90.2 88.6 162 3.11 1 FALSE 0.001125 0.01496 0.333 -250 5751 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHSCYRPR [K].gHScYRPR.[R] N-Term(TMT6plex); C4(Carbamidomethyl) 3 Q5BLK1 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1 Q3TL53; Q5BLK1; Q8BT09 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1 0 3 3 0.6287 0 1 1 1 421.21872 1261.64161 1261.64214 -0.42 -0.00018 0/0 0 0 1716655.125 HCD 30 MS2 21.18707 228.6 110 26.9528 4739 4739 4734 QEplus033719.raw F4 231.1 149.6 221.5 240.6 268.9 259.6 158 3.34 1 FALSE 1.14E-05 4.64E-05 0.921 -250 5764 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEEESER [K].aEEESER.[L] N-Term(TMT6plex) 3 Q61024 Asparagine synthetase [glutamine-hydrolyzing] OS=Mus musculus OX=10090 GN=Asns PE=1 SV=3 Q3TIA9; Q3TV20; Q61024 Asparagine synthetase [glutamine-hydrolyzing] OS=Mus musculus OX=10090 GN=Asns PE=2 SV=1; Asparagine synthetase [glutamine-hydrolyzing] OS=Mus musculus OX=10090 GN=Asns PE=2 SV=1; Asparagine synthetase [glutamine-hydrolyzing] OS=Mus musculus OX=10090 GN=Asns PE=1 SV=3 0 2 2 0.3813 0 1 1 1 539.76477 1078.52226 1078.5214 0.8 0.00043 0/0 0 0 1103504.5 HCD 30 MS2 25.08855 128.8 110 26.9578 4741 4741 4734 QEplus033719.raw F4 290.9 77.7 124.5 77.7 64.9 137.2 57 2.57 1 FALSE 5.44E-05 0.002246 0.587 -250 5772 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RADGPPASHDGGDR [R].rADGPPASHDGGDR.[S] N-Term(TMT6plex) 1 Q8BHL3 TBC1 domain family member 10B OS=Mus musculus OX=10090 GN=Tbc1d10b PE=1 SV=2 Q8BHL3 TBC1 domain family member 10B OS=Mus musculus OX=10090 GN=Tbc1d10b PE=1 SV=2 1 3 3 0.8132 0 1 1 1 546.27136 1636.79953 1636.79891 0.38 0.00021 0/0 0 0 648708.875 HCD 30 MS2 13.10345 35.3 110 26.9602 4742 4742 4734 QEplus033719.raw F4 43.5 26.3 31.9 31.8 44.1 34.2 116 4.55 1 FALSE 1.14E-05 6.31E-16 3.135 -250 5775 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSGGREDSESPGTQR [K].sSGGREDSESPGTQR.[S] N-Term(TMT6plex) 1 P97825 Jupiter microtubule associated homolog 1 OS=Mus musculus OX=10090 GN=Jpt1 PE=1 SV=3 P97825 Jupiter microtubule associated homolog 1 OS=Mus musculus OX=10090 GN=Jpt1 PE=1 SV=3 1 2 2 0.662 0 1 1 1 889.92645 1778.84563 1778.84665 -0.57 -0.00051 0/0 0 0 492902.7813 HCD 30 MS2 0 11.5 110 26.9628 4743 4743 4734 QEplus033719.raw F4 17.9 6.1 12.7 10.2 8.2 13.8 86 2.87 1 FALSE 5.44E-05 0.002225 0.588 -250 5784 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERGDINHERGER [K].eRGDINHERGER.[K] N-Term(TMT6plex) 4 Q3TV47 Sodium/potassium-transporting ATPase subunit beta OS=Mus musculus OX=10090 GN=Atp1b1 PE=2 SV=1 A0A0A6YX05; Q3TV47; Q3TSQ1; Q545P0 Sodium/potassium-transporting ATPase subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Atp1b1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit beta OS=Mus musculus OX=10090 GN=Atp1b1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit beta OS=Mus musculus OX=10090 GN=Atp1b1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit beta OS=Mus musculus OX=10090 GN=Atp1b1 PE=1 SV=1 2 3 3 0.4612 0 1 1 1 566.29376 1696.86673 1696.86766 -0.55 -0.00031 0/0 0 0 615854.75 HCD 30 MS2 0 19.6 110 26.9726 4746 4746 4745 QEplus033719.raw F4 21.8 13.7 27.7 21.5 12.4 20.4 233 2.19 1 FALSE 0.0007436 0.0106 0.395 -250 5790 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTGAVSAR [K].hTGAVSAR.[N] N-Term(TMT6plex) 8 Q3U1S6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1 A0A0G2JF72; A0A0G2JE62; Q3U1S6; Q8JZN2; Q8R3R1; Q3U4S7; Q3TXH7; Q80TP8 Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Cold shock domain-containing protein E1 (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Csde1 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; MKIAA0885 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1 0 2 2 0.4327 0 1 1 1 514.29633 1027.58537 1027.58461 0.75 0.00038 0/0 0 0 581244.5625 HCD 30 MS2 23.19001 75.8 110 26.9751 4747 4747 4745 QEplus033719.raw F4 195.5 34.7 69.9 63.1 48.5 43.2 131 2.45 1 FALSE 5.44E-05 0.002534 0.575 -250 5795 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYDSNSGGER [K].rYDSNSGGER.[E] N-Term(TMT6plex) 1 P62192 26S proteasome regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmc1 PE=1 SV=1 P62192 26S proteasome regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmc1 PE=1 SV=1 1 3 3 0.6424 0 1 1 1 457.22711 1369.66678 1369.66577 0.74 0.00034 0/0 0 0 13828005 HCD 30 MS2 8.044261 277.1 93.257 26.9774 4748 4748 4745 QEplus033719.raw F4 349.5 194.3 296.8 316.5 249.9 255.6 90 4.25 1 FALSE 1.14E-05 6.47E-08 1.463 -250 5799 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDRNQSYR [R].dDRNQSYR.[D] N-Term(TMT6plex) 4 F6YTL8 YLP motif-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ylpm1 PE=1 SV=1 Q9R0I7; F6YTL8; D3YWX2; E9Q803 YLP motif-containing protein 1 OS=Mus musculus OX=10090 GN=Ylpm1 PE=2 SV=2; YLP motif-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ylpm1 PE=1 SV=1; YLP motif-containing protein 1 OS=Mus musculus OX=10090 GN=Ylpm1 PE=1 SV=2; YLP motif-containing protein 1 OS=Mus musculus OX=10090 GN=Ylpm1 PE=1 SV=1 1 3 3 0.463 0 1 1 1 428.2164 1282.63465 1282.63374 0.71 0.0003 0/0 0 0 1779437.25 HCD 30 MS2 50.95623 170.6 110 26.9799 4749 4749 4745 QEplus033719.raw F4 260.2 119.6 157.3 134.4 198 153.9 113 2.57 1 FALSE 0.000262 0.005323 0.494 -250 5805 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERGDINHERGER [K].eRGDINHERGER.[K] N-Term(TMT6plex) 4 Q3TV47 Sodium/potassium-transporting ATPase subunit beta OS=Mus musculus OX=10090 GN=Atp1b1 PE=2 SV=1 A0A0A6YX05; Q3TV47; Q3TSQ1; Q545P0 Sodium/potassium-transporting ATPase subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Atp1b1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit beta OS=Mus musculus OX=10090 GN=Atp1b1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit beta OS=Mus musculus OX=10090 GN=Atp1b1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit beta OS=Mus musculus OX=10090 GN=Atp1b1 PE=1 SV=1 2 4 4 0.6377 0 1 1 1 424.97235 1696.86757 1696.86766 -0.05 -0.00002 0/0 0 0 1607515.75 HCD 30 MS2 39.9499 107.9 110 26.9824 4750 4750 4745 QEplus033719.raw F4 102 121.6 131.8 84.5 98.3 109.3 240 2.76 1 FALSE 1.14E-05 0.0001169 0.844 -250 5815 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYDSNSGGER [K].rYDSNSGGER.[E] N-Term(TMT6plex) 1 P62192 26S proteasome regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmc1 PE=1 SV=1 P62192 26S proteasome regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmc1 PE=1 SV=1 1 2 2 0.656 0 1 1 1 685.33667 1369.66606 1369.66577 0.21 0.00015 0/0 0 0 1165617.375 HCD 30 MS2 0 31.4 110 26.9874 4752 4752 4745 QEplus033719.raw F4 36.8 21 31.9 43.5 30.6 24.5 84 2.5 1 FALSE 5.44E-05 0.002073 0.595 -250 5826 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNCTVER [R].rNcTVER.[N] N-Term(TMT6plex); C3(Carbamidomethyl) 4 Q3URU2 Paternally-expressed gene 3 protein OS=Mus musculus OX=10090 GN=Peg3 PE=1 SV=1 Q3URU2; A0A5F8MPW9; Q0P5Y8; Q3URU2-2 Paternally-expressed gene 3 protein OS=Mus musculus OX=10090 GN=Peg3 PE=1 SV=1; Paternally-expressed gene 3 protein OS=Mus musculus OX=10090 GN=Peg3 PE=1 SV=1; Peg3 protein OS=Mus musculus OX=10090 GN=Peg3 PE=2 SV=1; Isoform 2 of Paternally-expressed gene 3 protein OS=Mus musculus OX=10090 GN=Peg3 1 3 3 0.4475 0 1 1 1 388.54291 1163.61417 1163.61526 -0.93 -0.00036 0/0 0 0 642877.6875 HCD 30 MS2 43.47155 71.6 110 26.9924 4754 4754 4745 QEplus033719.raw F4 109.7 52 68.2 63.6 74.5 61.6 195 2.95 1 FALSE 0.001624 0.02646 0.235 -250 5833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPAGNNDCR [R].gPAGNNDcR.[I] N-Term(TMT6plex); C8(Carbamidomethyl) 4 H7BX95 Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1 Q6PDM2-2; Q6PDM2-3; H7BX95; Q6PDM2 Isoform 2 of Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1; Isoform 3 of Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1; Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1; Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=3 0 3 3 0.7265 0 1 1 1 397.1915 1189.55994 1189.55814 1.52 0.0006 0/0 0 0 523015.1875 HCD 30 MS2 58.12227 73.8 110 26.9948 4755 4755 4745 QEplus033719.raw F4 100.8 47.3 69.2 80.2 68.6 77 28 2.45 1 FALSE 0.001607 0.02532 0.242 -250 5838 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQVQDESQR [R].rQVQDESQR.[K] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.4853 0 1 1 1 687.86871 1374.73015 1374.72871 1.05 0.00072 0/0 0 0 1269415.125 HCD 30 MS2 0 31.8 110 27.0022 4757 4757 4756 QEplus033719.raw F4 37.6 26.4 29 39.3 28.4 30.4 260 2.72 2 FALSE 5.44E-05 0.001786 0.609 -250 5847 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQVQDESQR [R].rQVQDESQR.[K] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.6399 0 1 1 1 458.91434 1374.72846 1374.72871 -0.18 -0.00008 0/0 0 0 9596515 HCD 30 MS2 28.52077 397.8 110 27.0072 4759 4759 4756 QEplus033719.raw F4 694.6 253.7 363.8 317.1 304 453.4 247 4.11 2 FALSE 1.14E-05 2.75E-05 0.964 -250 5867 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RADGPPASHDGGDR [R].rADGPPASHDGGDR.[S] N-Term(TMT6plex) 1 Q8BHL3 TBC1 domain family member 10B OS=Mus musculus OX=10090 GN=Tbc1d10b PE=1 SV=2 Q8BHL3 TBC1 domain family member 10B OS=Mus musculus OX=10090 GN=Tbc1d10b PE=1 SV=2 1 4 4 0.7578 0 1 1 1 409.95523 1636.79909 1636.79891 0.11 0.00005 0/0 0 0 3613728.25 HCD 30 MS2 41.04807 162.1 110 27.0147 4762 4762 4756 QEplus033719.raw F4 248.8 92.3 178.7 121.7 174.2 156.6 117 4.5 1 FALSE 1.14E-05 8.25E-08 1.443 -250 5881 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHVQDPNDRR [R].gHVQDPNDRR.[L] N-Term(TMT6plex) 4 Q8BWZ3 "N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Mus musculus OX=10090 GN=Naa25 PE=1 SV=1" G3UZX9; F6XQZ4; Q8BKH5; Q8BWZ3 "N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Mus musculus OX=10090 GN=Naa25 PE=1 SV=1; N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Mus musculus OX=10090 GN=Naa25 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Naa25 PE=2 SV=1; N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Mus musculus OX=10090 GN=Naa25 PE=1 SV=1" 1 4 4 0.6862 0 1 1 1 356.4404 1422.73977 1422.73994 -0.12 -0.00004 0/0 0 0 2315496.75 HCD 30 MS2 53.01011 203.5 110 27.0221 4765 4765 4756 QEplus033719.raw F4 276.1 129.7 211.4 192.3 203.7 207.7 243 3.25 1 FALSE 1.14E-05 0.0004279 0.735 -250 5890 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHSCYRPR [K].gHScYRPR.[R] N-Term(TMT6plex); C4(Carbamidomethyl) 3 Q5BLK1 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1 Q3TL53; Q5BLK1; Q8BT09 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.6993 0 1 1 1 631.32489 1261.6425 1261.64214 0.29 0.00018 0/0 0 0 1783048 HCD 30 MS2 0 142.5 110 27.0246 4766 4766 4756 QEplus033719.raw F4 143.4 109.3 150.7 152.2 183.4 116.2 158 2.76 1 FALSE 0.0005373 0.00819 0.436 -250 5896 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HRDLEER [R].hRDLEER.[S] N-Term(TMT6plex) 3 Q7TSH6 SR-related and CTD-associated factor 4 OS=Mus musculus OX=10090 GN=Scaf4 PE=1 SV=1 Q7TSH6-3; Q7TSH6; Q7TSH6-2 Isoform 3 of SR-related and CTD-associated factor 4 OS=Mus musculus OX=10090 GN=Scaf4; SR-related and CTD-associated factor 4 OS=Mus musculus OX=10090 GN=Scaf4 PE=1 SV=1; Isoform 2 of SR-related and CTD-associated factor 4 OS=Mus musculus OX=10090 GN=Scaf4 1 3 3 0.3935 0 1 1 1 395.21747 1183.63785 1183.6381 -0.21 -0.00008 0/0 0 0 2942508 HCD 30 MS2 37.56643 197.8 110 27.0322 4768 4768 4767 QEplus033719.raw F4 261.6 152 207.1 138.4 241.3 186.1 215 2.77 1 FALSE 0.002049 0.03648 0.188 -250 5902 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRPGPQTR [K].nRPGPQTR.[S] N-Term(TMT6plex) 2 Q8CIG8 Protein arginine N-methyltransferase 5 OS=Mus musculus OX=10090 GN=Prmt5 PE=1 SV=3 A0A0R4J049; Q8CIG8 Protein arginine N-methyltransferase 5 OS=Mus musculus OX=10090 GN=Prmt5 PE=1 SV=1; Protein arginine N-methyltransferase 5 OS=Mus musculus OX=10090 GN=Prmt5 PE=1 SV=3 0 2 2 0.4276 0 1 1 1 577.83374 1154.6602 1154.65917 0.9 0.00052 0/0 0 0 2110247.75 HCD 30 MS2 3.508634 73.3 110 27.0347 4769 4769 4767 QEplus033719.raw F4 82.8 56.3 76 70.5 84 69.9 149 1.52 1 FALSE 0.009476 0.1787 -0.116 -250 5915 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHVQDPNDRR [R].gHVQDPNDRR.[L] N-Term(TMT6plex) 4 Q8BWZ3 "N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Mus musculus OX=10090 GN=Naa25 PE=1 SV=1" G3UZX9; F6XQZ4; Q8BKH5; Q8BWZ3 "N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Mus musculus OX=10090 GN=Naa25 PE=1 SV=1; N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Mus musculus OX=10090 GN=Naa25 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Naa25 PE=2 SV=1; N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Mus musculus OX=10090 GN=Naa25 PE=1 SV=1" 1 3 3 0.6623 0 1 1 1 474.91815 1422.7399 1422.73994 -0.03 -0.00001 0/0 0 0 2587416 HCD 30 MS2 28.66397 203.4 110 27.0397 4771 4771 4767 QEplus033719.raw F4 290.3 129.1 210 177.1 205.7 208.3 240 3.85 1 FALSE 1.14E-05 4.26E-06 1.118 -250 5922 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESTTSEQSAR [K].eSTTSEQSAR.[M] N-Term(TMT6plex) 5 Q8C2Q8; A2AKU9 ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1;ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1 Q9ERA8; Q8C2Q8; Q9D9D7; Q3UD06; A2AKU9 ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=2 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=2 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1 0 2 2 0.5893 0 1 1 1 662.83087 1324.65447 1324.6542 0.2 0.00013 0/0 0 0 2785627 HCD 30 MS2 6.499872 218.5 110 27.0423 4772 4772 4767 QEplus033719.raw F4 271.2 144.2 243.8 291.6 152.7 207.5 102 3.19 2 FALSE 1.14E-05 2.68E-07 1.346 -250 5932 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGGGGYSSR [R].sGGGGYSSR.[R] N-Term(TMT6plex) 1 Q3TWW8 Serine/arginine-rich splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1 Q3TWW8 Serine/arginine-rich splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1 0 2 2 0.4537 0 1 1 1 528.76703 1056.52678 1056.52715 -0.35 -0.00019 0/0 0 0 1614775 HCD 30 MS2 22.42758 144.4 110 27.0447 4773 4773 4767 QEplus033719.raw F4 258.2 112.5 179 96.7 95.6 124.4 72 2.27 1 FALSE 1.14E-05 0.0002866 0.769 -250 5947 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVSGHLNGQAR [K].gVSGHLNGQAR.[A] N-Term(TMT6plex) 1 Q8CBD1 Nuclear receptor-interacting protein 1 OS=Mus musculus OX=10090 GN=Nrip1 PE=1 SV=1 Q8CBD1 Nuclear receptor-interacting protein 1 OS=Mus musculus OX=10090 GN=Nrip1 PE=1 SV=1 0 3 3 0.0857 0 1 1 1 442.24774 1324.72867 1324.72831 0.27 0.00012 0/0 0 0 1485740.25 HCD 30 MS2 18.91553 104.2 110 27.0497 4775 4775 4767 QEplus033719.raw F4 111.1 106.8 128.4 60.4 134.5 84 340 2.1 1 FALSE 0.004906 0.08582 0.046 -250 5952 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGGGGYNQNR [R].sGGGGYNQNR.[W] N-Term(TMT6plex) 2 Q8VDM6 Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus OX=10090 GN=Hnrnpul1 PE=1 SV=1 Q8VDM6; Q8VDM6-2 Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus OX=10090 GN=Hnrnpul1 PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus OX=10090 GN=Hnrnpul1 0 2 2 0.7079 0 1 1 1 619.80798 1238.60869 1238.60753 0.94 0.00058 0/0 0 0 1318864.375 HCD 30 MS2 28.89582 147 110 27.0523 4776 4776 4767 QEplus033719.raw F4 175.9 126.5 176.9 129.5 167.2 106.2 99 2.91 1 FALSE 1.14E-05 3.04E-07 1.336 -250 5973 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEQAER [K].eAEQAER.[A] N-Term(TMT6plex) 11 Q80TU6 MKIAA0670 protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1 Q7TSL7; Q9JIX8; Q3UXT9; B8JJ91; B8JJ92; Q9JIX8-2; Q9JIX8-4; Q9JIX8-3; F6RJ39; Q52KR6; Q80TU6 Apoptotic chromatin condensation inducer 1 OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1; Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=3; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1; Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Isoform 2 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Isoform 4 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Isoform 3 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Apoptotic chromatin condensation inducer in the nucleus (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Acin1 protein OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; MKIAA0670 protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1 0 2 2 0.2449 0 1 1 1 531.27484 1061.54241 1061.54247 -0.06 -0.00003 0/0 0 0 1313209.125 HCD 30 MS2 6.429482 103.1 110 27.0646 4780 4780 4778 QEplus033719.raw F4 242.4 59.7 103.5 57.6 56.3 99.1 95 2.45 1 FALSE 9.73E-05 0.002983 0.559 -250 5984 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEGNDRPVRR [R].eEGNDRPVRR.[S] N-Term(TMT6plex) 5 A0A0A0MQ79 Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1 A0A0A0MQ79; S4R294; S4R2J9; Q3TLH4; Q3TLH4-5 Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=3; Isoform 5 of Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c 1 4 4 0.5308 0 1 1 1 364.95065 1456.78078 1456.7818 -0.7 -0.00026 0/0 0 0 2012710.5 HCD 30 MS2 34.26449 125.9 110 27.0721 4783 4783 4778 QEplus033719.raw F4 159.9 90 127.7 116.1 154.6 106.9 255 3.73 1 FALSE 1.14E-05 4.16E-05 0.93 -250 5992 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSADVNAR [K].hSADVNAR.[D] N-Term(TMT6plex) 7 Q505D1 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A OS=Mus musculus OX=10090 GN=Ankrd28 PE=1 SV=1 Q505D1; A0A2I3BRN1; J3QK37; E9QNQ2; B2RXR6; Q8BYT6; A0A2I3BQ07 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A OS=Mus musculus OX=10090 GN=Ankrd28 PE=1 SV=1; Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A (Fragment) OS=Mus musculus OX=10090 GN=Ankrd28 PE=1 SV=1; Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B (Fragment) OS=Mus musculus OX=10090 GN=Ankrd44 PE=1 SV=1; Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Mus musculus OX=10090 GN=Ankrd44 PE=1 SV=1; Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Mus musculus OX=10090 GN=Ankrd44 PE=1 SV=1; ANK_REP_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Ankrd44 PE=2 SV=1; Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A OS=Mus musculus OX=10090 GN=Ankrd28 PE=1 SV=1 0 3 3 0.6082 0 1 1 1 366.86542 1098.5817 1098.58534 -3.31 -0.00121 0/0 0 0 1399849.25 HCD 30 MS2 39.87619 123.5 110 27.0745 4784 4784 4778 QEplus033719.raw F4 227 63.8 115.1 125 96.8 113.6 126 3.65 1 FALSE 1.14E-05 0.0002265 0.789 -250 6000 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGSGGASGTSQPSSGGGSSNSR [K].dGSGGASGTSQPSSGGGSSNSR.[E] N-Term(TMT6plex) 3 Q14AX6 Cyclin-dependent kinase 12 OS=Mus musculus OX=10090 GN=Cdk12 PE=1 SV=2 Q14AX6-2; Q14AX6; Q14AX6-3 Isoform 2 of Cyclin-dependent kinase 12 OS=Mus musculus OX=10090 GN=Cdk12; Cyclin-dependent kinase 12 OS=Mus musculus OX=10090 GN=Cdk12 PE=1 SV=2; Isoform 3 of Cyclin-dependent kinase 12 OS=Mus musculus OX=10090 GN=Cdk12 0 3 3 0.7496 0 1 1 1 709.32349 2125.95591 2125.95436 0.73 0.00052 0/0 0 0 1029860.563 HCD 30 MS2 0 8.4 110 27.0771 4785 4785 4778 QEplus033719.raw F4 7.4 9 8.6 8.4 6.9 9.8 35 5.75 1 FALSE 1.14E-05 1.14E-13 2.556 -250 6013 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTHQEEK [K].rTHQEEk.[K] N-Term(TMT6plex); K7(TMT6plex) 5 Q8C1B7 Septin-11 OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=4 Q8C1B7; Q8C1B7-3; A0A0J9YUL3; A0A0J9YTY0; Q8C1B7-2 Septin-11 OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=4; Isoform 3 of Septin-11 OS=Mus musculus OX=10090 GN=Septin11; Septin OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=1; Isoform 2 of Septin-11 OS=Mus musculus OX=10090 GN=Septin11 1 3 3 0.5446 0 1 1 1 462.60147 1385.78986 1385.79013 -0.2 -0.00009 0/0 0 0 1015570.125 HCD 30 MS2 35.79831 104.6 110 27.082 4787 4787 4778 QEplus033719.raw F4 294.8 42.9 67.8 70.1 63.9 88.2 365 2.13 1 FALSE 0.0023 0.04572 0.155 -250 6021 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGSSSQPSTSAR [R].gGSSSQPSTSAR.[T] N-Term(TMT6plex) 4 Q7TMI3 E3 ubiquitin-protein ligase UHRF2 OS=Mus musculus OX=10090 GN=Uhrf2 PE=1 SV=1 Q7TMI3; Q7TMI3-3; Q7TMI3-2; Q3T995 E3 ubiquitin-protein ligase UHRF2 OS=Mus musculus OX=10090 GN=Uhrf2 PE=1 SV=1; Isoform 3 of E3 ubiquitin-protein ligase UHRF2 OS=Mus musculus OX=10090 GN=Uhrf2; Isoform 2 of E3 ubiquitin-protein ligase UHRF2 OS=Mus musculus OX=10090 GN=Uhrf2; TTD domain-containing protein OS=Mus musculus OX=10090 GN=Uhrf2 PE=2 SV=1 0 2 2 0.6765 0 1 1 1 675.84399 1350.68071 1350.68109 -0.28 -0.00019 0/0 0 0 998470.125 HCD 30 MS2 0 58 110 27.0846 4788 4788 4778 QEplus033719.raw F4 59 63.2 56.3 36.1 92.5 41 148 3.71 1 FALSE 1.14E-05 2.54E-08 1.54 -250 6032 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDSSPNQAR [K].tDSSPNQAR.[A] N-Term(TMT6plex) 15 Q8K144 Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1 E9QMW9; Q3TQW3; Q8K144; Q8R509; Q3UBR5; Q922I7; Q8C2R5; Q8CB58; Q8BGJ5; Q5RJV5; F7DCW4; Q6NZB8; Q3U5I2; Q3T984; Q80T07 Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypirimidine tract binding protein OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1 0 2 2 0.6487 0 1 1 1 602.80927 1204.61125 1204.61194 -0.57 -0.00035 0/0 0 0 2725864.25 HCD 30 MS2 5.222182 165.9 110 27.0946 4791 4791 4789 QEplus033719.raw F4 262 171.6 179.8 80.3 182.6 119.3 153 2.79 1 FALSE 4.43E-05 0.00158 0.621 -250 6049 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEGNDRPVRR [R].eEGNDRPVRR.[S] N-Term(TMT6plex) 5 A0A0A0MQ79 Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1 A0A0A0MQ79; S4R294; S4R2J9; Q3TLH4; Q3TLH4-5 Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=3; Isoform 5 of Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c 1 3 3 0.3227 0 1 1 1 486.26569 1456.7825 1456.7818 0.48 0.00023 0/0 0 0 1682131.875 HCD 30 MS2 20.71793 108.3 110 27.1021 4794 4794 4789 QEplus033719.raw F4 130.6 74.3 108.5 93.1 142 101.2 266 2.2 1 FALSE 0.0002719 0.005501 0.49 -250 6055 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NENESEAAR [R].nENESEAAR.[R] N-Term(TMT6plex) 2 Q3TDX2 Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Vps4a PE=2 SV=1 Q3TDX2; Q8VEJ9 Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Vps4a PE=2 SV=1; Vacuolar protein sorting-associated protein 4A OS=Mus musculus OX=10090 GN=Vps4a PE=1 SV=1 0 2 2 0.7391 0 1 1 1 624.80414 1248.601 1248.60177 -0.62 -0.00039 0/0 0 0 743964.875 HCD 30 MS2 0 56.8 110 27.1046 4795 4795 4789 QEplus033719.raw F4 70.2 40.3 59.9 56.8 56.9 56.5 75 3.22 1 FALSE 1.14E-05 3.57E-06 1.132 -250 6072 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRTGSESSQTGASATSGR [R].sRTGSESSQTGASATSGR.[N] N-Term(TMT6plex) 6 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; Q3TSY9; Q3UGC0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 3 3 0.7774 0 1 1 1 652.65759 1955.95823 1955.95799 0.12 0.00008 0/0 0 0 6308002.5 HCD 30 MS2 1.001297 98.4 110 27.1097 4797 4797 4789 QEplus033719.raw F4 94.4 121.4 107.3 62 135.6 69.4 143 5.75 1 FALSE 1.14E-05 6.31E-16 3.812 -250 6106 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRENYDR [R].dRENYDR.[G] N-Term(TMT6plex) 8 Q5U222 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1 Q9CSD9; Q3UXW3; Q5U222; Q3V0Z8; Q921Y3; A1L333; Q61656; Q8BTS0 Helicase C-terminal domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Ddx5 protein OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 1 3 3 0.6267 0 1 1 1 399.53339 1196.58561 1196.58573 -0.1 -0.00004 0/0 0 0 4369344.5 HCD 30 MS2 23.63437 262.3 110 27.127 4803 4803 4800 QEplus033719.raw F4 276 227.5 269.7 221 359.4 220.3 96 3 1 FALSE 0.0006035 0.00885 0.424 -250 6112 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESTTSEQSAR [K].eSTTSEQSAR.[M] N-Term(TMT6plex) 5 Q8C2Q8; A2AKU9 ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1;ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1 Q9ERA8; Q8C2Q8; Q9D9D7; Q3UD06; A2AKU9 ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=2 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=2 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1 0 3 3 0.658 0 1 1 1 442.22314 1324.65488 1324.6542 0.51 0.00023 0/0 0 0 4247076 HCD 30 MS2 38.05441 128.6 110 27.1295 4804 4804 4800 QEplus033719.raw F4 136.4 110.1 161.7 115.7 137.3 110.3 102 4.21 2 FALSE 1.14E-05 0.0003714 0.747 -250 6122 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NADDDRPPRR [R].nADDDRPPRR.[I] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 4 4 0.6427 0 1 1 1 360.94287 1440.74965 1440.7505 -0.59 -0.00021 0/0 0 0 2116141.5 HCD 30 MS2 33.73484 120.7 110 27.1319 4805 4805 4800 QEplus033719.raw F4 145.2 88.6 113.9 107.6 148.6 120.1 226 3.75 1 FALSE 1.14E-05 1.36E-06 1.212 -250 6133 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THQEVTSSR [K].tHQEVTSSR.[L] N-Term(TMT6plex) 3 Q8C2E7 WASH complex subunit 5 OS=Mus musculus OX=10090 GN=Washc5 PE=1 SV=2 Q8C2E7; Q8C2E7-2; Q3TQ26 WASH complex subunit 5 OS=Mus musculus OX=10090 GN=Washc5 PE=1 SV=2; Isoform 2 of WASH complex subunit 5 OS=Mus musculus OX=10090 GN=Washc5; WASH complex subunit 5 (Fragment) OS=Mus musculus OX=10090 GN=Washc5 PE=2 SV=1 0 3 3 0.5215 0 1 1 1 425.22696 1273.66632 1273.66979 -2.72 -0.00116 0/0 0 0 1486026.375 HCD 30 MS2 18.09118 100.5 110 27.1369 4807 4807 4800 QEplus033719.raw F4 146.8 67.6 107.9 81.5 96.9 102 178 3.49 1 FALSE 7.59E-05 0.002747 0.567 -250 6135 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESQGGATSTEGR [R].eSQGGATSTEGR.[R] N-Term(TMT6plex) 2 Q8R1X6 Spartin OS=Mus musculus OX=10090 GN=Spart PE=1 SV=1 Q8R1X6-2; Q8R1X6 Isoform 2 of Spartin OS=Mus musculus OX=10090 GN=Spart; Spartin OS=Mus musculus OX=10090 GN=Spart PE=1 SV=1 0 2 2 0.6846 0 1 1 1 704.84747 1408.68767 1408.68657 0.78 0.00055 0/0 0 0 709429.375 HCD 30 MS2 10.0763 73.9 110 27.1395 4808 4808 4800 QEplus033719.raw F4 83.3 54.2 82.9 61.6 93.2 68.2 104 4.09 1 FALSE 1.14E-05 3.25E-10 1.9 -250 6142 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRENYDR [R].dRENYDR.[G] N-Term(TMT6plex) 8 Q5U222 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1 Q9CSD9; Q3UXW3; Q5U222; Q3V0Z8; Q921Y3; A1L333; Q61656; Q8BTS0 Helicase C-terminal domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Ddx5 protein OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 1 2 2 0.4937 0 1 1 1 598.797 1196.58672 1196.58573 0.83 0.00049 0/0 0 0 709171.25 HCD 30 MS2 12.91508 50.6 110 27.142 4809 4809 4800 QEplus033719.raw F4 56.6 45.6 51 41.7 69.5 39 86 2.37 1 FALSE 0.002526 0.04951 0.144 -250 6148 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNHDGECTAAPTNR [K].rNHDGEcTAAPTNR.[Q] N-Term(TMT6plex); C7(Carbamidomethyl) 1 Q9Z0W3 Nuclear pore complex protein Nup160 OS=Mus musculus OX=10090 GN=Nup160 PE=1 SV=2 Q9Z0W3 Nuclear pore complex protein Nup160 OS=Mus musculus OX=10090 GN=Nup160 PE=1 SV=2 1 3 3 0.7646 0 1 1 1 609.96204 1827.87156 1827.87176 -0.11 -0.00007 0/0 0 0 549276.875 HCD 30 MS2 0 35.5 110 27.1445 4810 4810 4800 QEplus033719.raw F4 43 30.7 42.5 25.6 40.3 30.7 82 4.8 1 FALSE 1.14E-05 8.26E-15 2.772 -250 6152 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQAQEEAER [K].rQAQEEAER.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.574 0 1 1 1 449.23969 1345.7045 1345.70216 1.74 0.00078 0/0 0 0 435774.25 HCD 30 MS2 23.24262 49 110 27.1518 4812 4812 4811 QEplus033719.raw F4 66.6 31.6 53.1 45.1 46.5 51.2 196 3.31 2 FALSE 1.14E-05 8.73E-05 0.868 -250 6164 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRTPPPR [K].dRTPPPR.[F] N-Term(TMT6plex) 1 Q497N1 40S ribosomal protein S26 OS=Mus musculus OX=10090 GN=Rps26 PE=1 SV=1 Q497N1 40S ribosomal protein S26 OS=Mus musculus OX=10090 GN=Rps26 PE=1 SV=1 1 3 3 0.547 0 1 1 1 356.54349 1067.61591 1067.61591 0 0 0/0 0 0 46105616 HCD 30 MS2 25.70843 304 25.679 27.1565 4814 4814 4811 QEplus033719.raw F4 443.1 178.6 307.8 261.2 344.7 288.4 84 2.87 1 FALSE 0.0006126 0.009056 0.42 -250 6171 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRTPPPR [K].dRTPPPR.[F] N-Term(TMT6plex) 1 Q497N1 40S ribosomal protein S26 OS=Mus musculus OX=10090 GN=Rps26 PE=1 SV=1 Q497N1 40S ribosomal protein S26 OS=Mus musculus OX=10090 GN=Rps26 PE=1 SV=1 1 2 2 0.5859 0 1 1 1 534.31177 1067.61626 1067.61591 0.33 0.00018 0/0 0 0 3329516.75 HCD 30 MS2 7.899767 101.7 110 27.159 4815 4815 4811 QEplus033719.raw F4 176.4 61.8 100.5 96.4 88 87.1 84 1.98 1 FALSE 0.0008096 0.01115 0.386 -250 6176 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRTGSESSQTGASATSGR [R].sRTGSESSQTGASATSGR.[N] N-Term(TMT6plex) 6 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; Q3TSY9; Q3UGC0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 2 2 0.7472 0 1 1 1 978.48181 1955.95635 1955.95799 -0.84 -0.00082 0/0 0 0 363959.5313 HCD 30 MS2 0 8.3 110 27.1641 4817 4817 4811 QEplus033719.raw F4 9.6 10 10.2 5.9 8.8 5 142 2.69 1 FALSE 0.001421 0.02031 0.278 -250 6183 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQGPGAGTR [R].qQGPGAGTR.[D] N-Term(TMT6plex) 6 A0A087WQC4 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L OS=Mus musculus OX=10090 GN=Taf6l PE=1 SV=1 Q8R2K4-2; A0A087WQC4; Q8R2K4; H3BJR2; K3W4L1; H3BK01 Isoform 2 of TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L OS=Mus musculus OX=10090 GN=Taf6l; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L OS=Mus musculus OX=10090 GN=Taf6l PE=1 SV=1; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L OS=Mus musculus OX=10090 GN=Taf6l PE=1 SV=1; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L OS=Mus musculus OX=10090 GN=Taf6l PE=1 SV=1; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L OS=Mus musculus OX=10090 GN=Taf6l PE=1 SV=1; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L OS=Mus musculus OX=10090 GN=Taf6l PE=1 SV=1 0 2 2 0.6382 0 1 1 1 550.80396 1100.60063 1100.60099 -0.32 -0.00018 0/0 0 0 403907.625 HCD 30 MS2 25.75132 57.2 110 27.1666 4818 4818 4811 QEplus033719.raw F4 58.2 56.6 62.4 39.7 76 50.4 157 2.46 1 FALSE 0.0002419 0.004854 0.505 -250 6191 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEDEESDHN [R].eAEDEESDHN.[-] N-Term(TMT6plex) 9 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 Q8R2V4; Q6NZJ6-2; E9Q9E1; Q6PD42; E9PVC5; E9PVC6; A0A0J9YUS5; Q6NZJ6; Q8K0J8 Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 0 2 2 1 0 1 1 1 702.29181 1403.57634 1403.57601 0.23 0.00016 0/0 0 0 277485.8438 HCD 30 MS2 19.69235 14.3 110 27.1691 4819 4819 4811 QEplus033719.raw F4 17.9 10.4 12.1 13.5 19.7 12.3 1 2.51 1 FALSE 0.001001 0.01318 0.356 -250 6192 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REPSSDVHSR [R].rEPSSDVHSR.[L] N-Term(TMT6plex) 3 Q8BZR9 Nuclear cap-binding protein subunit 3 OS=Mus musculus OX=10090 GN=Ncbp3 PE=1 SV=1 Q8BZR9; Q7TPS9; Q3TLD7 Nuclear cap-binding protein subunit 3 OS=Mus musculus OX=10090 GN=Ncbp3 PE=1 SV=1; Nuclear cap-binding protein subunit 3 (Fragment) OS=Mus musculus OX=10090 GN=Ncbp3 PE=2 SV=1; Nuclear cap-binding protein subunit 3 (Fragment) OS=Mus musculus OX=10090 GN=Ncbp3 PE=2 SV=1 1 4 4 0.5808 0 1 1 1 350.4375 1398.72817 1398.72871 -0.38 -0.00013 0/0 0 0 682610.0625 HCD 30 MS2 32.13122 46.8 110 27.1715 4820 4820 4811 QEplus033719.raw F4 56.9 37.5 53.7 40.3 61.1 31.3 210 3.65 1 FALSE 3.35E-05 0.001322 0.637 -250 6211 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDPDGEHAR [K].eDPDGEHAR.[R] N-Term(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; A0A3Q4EH91; Q9D0E1-2; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 2 2 0.6436 0 1 1 1 627.79944 1254.5916 1254.59121 0.31 0.0002 0/0 0 0 279862.125 HCD 30 MS2 51.3785 26.6 110 27.1891 4826 4826 4822 QEplus033719.raw F4 33.4 18.8 27.4 23.4 33 23.6 71 2.89 1 FALSE 1.14E-05 0.0003202 0.76 -250 6230 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSMRGDSGR [K].dSMRGDSGR.[Y] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 1 3 3 0.5 0 1 1 1 403.86603 1209.58353 1209.58435 -0.68 -0.00027 0/0 0 0 2077977.875 HCD 30 MS2 24.90436 153.8 110 27.1966 4829 4829 4822 QEplus033719.raw F4 263.8 70.5 126.1 224.2 72.5 165.5 81 2.86 2 FALSE 0.0007626 0.01072 0.393 -250 6249 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAATSPSR [R].qAATSPSR.[L] N-Term(TMT6plex) 3 G3UYZ1 Immunoglobulin superfamily member 8 OS=Mus musculus OX=10090 GN=Igsf8 PE=1 SV=1 G3UYZ1; Q8R366; A0A0R4J117 Immunoglobulin superfamily member 8 OS=Mus musculus OX=10090 GN=Igsf8 PE=1 SV=1; Immunoglobulin superfamily member 8 OS=Mus musculus OX=10090 GN=Igsf8 PE=1 SV=2; Immunoglobulin superfamily member 8 OS=Mus musculus OX=10090 GN=Igsf8 PE=1 SV=1 0 2 2 0.3665 0 1 1 1 523.79321 1046.57915 1046.57919 -0.04 -0.00002 0/0 0 0 907514.625 HCD 30 MS2 19.76523 69.5 110 27.2041 4832 4832 4822 QEplus033719.raw F4 108.3 42.1 79.5 60 51.8 75.3 283 2.21 1 FALSE 0.0007533 0.01062 0.394 -250 6268 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THQEVTSSR [K].tHQEVTSSR.[L] N-Term(TMT6plex) 3 Q8C2E7 WASH complex subunit 5 OS=Mus musculus OX=10090 GN=Washc5 PE=1 SV=2 Q8C2E7; Q8C2E7-2; Q3TQ26 WASH complex subunit 5 OS=Mus musculus OX=10090 GN=Washc5 PE=1 SV=2; Isoform 2 of WASH complex subunit 5 OS=Mus musculus OX=10090 GN=Washc5; WASH complex subunit 5 (Fragment) OS=Mus musculus OX=10090 GN=Washc5 PE=2 SV=1 0 2 2 0.5491 0 1 1 1 637.33862 1273.66997 1273.66979 0.14 0.00009 0/0 0 0 514964.125 HCD 30 MS2 0 35.9 110 27.2139 4835 4835 4833 QEplus033719.raw F4 59.3 24.4 37.7 41.1 30.9 22.2 224 2.75 1 FALSE 1.14E-05 0.0001523 0.822 -250 6274 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDPDGEHAR [K].eDPDGEHAR.[R] N-Term(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; A0A3Q4EH91; Q9D0E1-2; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 3 3 0.7299 0 1 1 1 418.86874 1254.59168 1254.59121 0.37 0.00016 0/0 0 0 4304804 HCD 30 MS2 18.71504 141.4 110 27.2189 4837 4837 4833 QEplus033719.raw F4 191.1 105.5 168.2 112.5 144.1 127.1 71 4.48 1 FALSE 1.14E-05 5.34E-07 1.289 -250 6287 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NADDDRPPRR [R].nADDDRPPRR.[I] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.698 0 1 1 1 480.92151 1440.74997 1440.7505 -0.37 -0.00018 0/0 0 0 2485413.75 HCD 30 MS2 17.44323 150.3 110 27.2239 4839 4839 4833 QEplus033719.raw F4 214.1 97.9 148.8 111.2 179.2 150.7 215 3.51 1 FALSE 6.52E-05 0.002673 0.57 -250 6293 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERAAGGGGGSGEDEAQSR [K].eRAAGGGGGSGEDEAQSR.[RH] N-Term(TMT6plex) 4 Q9CRA5 Golgi phosphoprotein 3 OS=Mus musculus OX=10090 GN=Golph3 PE=1 SV=1 Q9CRA5; Q05BZ0; Q3TIL4; Q9CRA5-2 Golgi phosphoprotein 3 OS=Mus musculus OX=10090 GN=Golph3 PE=1 SV=1; Golgi phosphoprotein 3 OS=Mus musculus OX=10090 GN=Golph3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Golph3 PE=2 SV=1; Isoform 2 of Golgi phosphoprotein 3 OS=Mus musculus OX=10090 GN=Golph3 1 3 3 0.8228 0 1 1 1 640.63837 1919.90055 1919.90047 0.04 0.00002 0/0 0 0 837933 HCD 30 MS2 0 32.7 110 27.2289 4841 4841 4833 QEplus033719.raw F4 29.8 28.8 37.9 21.7 49 28.7 53 5.7 1 FALSE 1.14E-05 6.31E-16 3.386 -250 6299 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDADDGSPQR [R].qDADDGSPQR.[Q] N-Term(TMT6plex) 1 Q9JJ89 Coiled-coil domain-containing protein 86 OS=Mus musculus OX=10090 GN=Ccdc86 PE=1 SV=2 Q9JJ89 Coiled-coil domain-containing protein 86 OS=Mus musculus OX=10090 GN=Ccdc86 PE=1 SV=2 0 2 2 0.8185 0 1 1 1 659.31494 1317.62261 1317.62324 -0.48 -0.00032 0/0 0 0 343295.9688 HCD 30 MS2 21.30695 25.9 110 27.2314 4842 4842 4833 QEplus033719.raw F4 23.7 23.8 28.3 25.7 21.2 32.7 35 2.7 1 FALSE 0.0003496 0.006826 0.461 -250 6318 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQSDREYR [K].nQSDREYR.[K] N-Term(TMT6plex) 4 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; A0A571BF46; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 1 3 3 0.4753 0 1 1 1 432.88815 1296.64991 1296.64939 0.4 0.00017 0/0 0 0 2602680.75 HCD 30 MS2 29.65164 137.2 110 27.2438 4846 4846 4844 QEplus033719.raw F4 165.3 33.8 122 248.3 50.1 203.9 134 2.63 1 FALSE 0.0004091 0.007361 0.451 -250 6325 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RALSSQHQAR [K].rALSSQHQAR.[I] N-Term(TMT6plex) 10 P20029 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q3U9G2; Q3U6V3; Q3TUS2; Q3UEM8; Q3U7T8; Q3TI47 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1 1 3 3 0.6679 0 1 1 1 461.59833 1382.78043 1382.78141 -0.71 -0.00033 0/0 0 0 9659048 HCD 30 MS2 17.93634 210.4 110 27.2462 4847 4847 4844 QEplus033719.raw F4 202.4 152.1 173.9 361.6 260.2 112.2 352 5.54 1 FALSE 1.14E-05 4.18E-07 1.309 -250 6340 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HNQLQDGHER [K].hNQLQDGHER.[E] N-Term(TMT6plex) 5 Q99JR8 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 OS=Mus musculus OX=10090 GN=Smarcd2 PE=1 SV=2 Q3TM59; G3UXC0; Q99JR8; Q99JR8-2; Q3TXH6 SWIB domain-containing protein OS=Mus musculus OX=10090 GN=Smarcd2 PE=2 SV=1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 (Fragment) OS=Mus musculus OX=10090 GN=Smarcd2 PE=1 SV=1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 OS=Mus musculus OX=10090 GN=Smarcd2 PE=1 SV=2; Isoform 2 of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 OS=Mus musculus OX=10090 GN=Smarcd2; SWIB domain-containing protein OS=Mus musculus OX=10090 GN=Smarcd2 PE=2 SV=1 0 3 3 0.73 0 1 1 1 488.24954 1462.73407 1462.73485 -0.53 -0.00026 0/0 0 0 1542469.75 HCD 30 MS2 8.038277 52 110 27.2512 4849 4849 4844 QEplus033719.raw F4 54 45.5 51.5 42.9 74.8 43.3 149 4.63 1 FALSE 1.14E-05 3.08E-09 1.714 -250 6359 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHRVPCGQNTR [R].sHRVPcGQNTR.[F] N-Term(TMT6plex); C6(Carbamidomethyl) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 1 3 3 0.6194 0 1 1 1 514.27057 1540.79715 1540.79641 0.48 0.00025 0/0 0 0 3321268.25 HCD 30 MS2 17.92896 153.6 110 27.2637 4854 4854 4844 QEplus033719.raw F4 205.1 32.4 104.9 321.9 49.7 207.8 231 2.89 2 FALSE 1.14E-05 6.00E-05 0.899 -250 6366 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNHDGECTAAPTNR [K].rNHDGEcTAAPTNR.[Q] N-Term(TMT6plex); C7(Carbamidomethyl) 1 Q9Z0W3 Nuclear pore complex protein Nup160 OS=Mus musculus OX=10090 GN=Nup160 PE=1 SV=2 Q9Z0W3 Nuclear pore complex protein Nup160 OS=Mus musculus OX=10090 GN=Nup160 PE=1 SV=2 1 4 4 0.7252 0 1 1 1 457.72357 1827.87246 1827.87176 0.38 0.00017 0/0 0 0 2907766.5 HCD 30 MS2 27.52872 53.3 110 27.2712 4856 4856 4855 QEplus033719.raw F4 72.3 42.9 54.1 41.5 59.4 49.6 87 4.44 1 FALSE 1.14E-05 1.42E-08 1.588 -250 6371 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HNQLQDGHER [K].hNQLQDGHER.[E] N-Term(TMT6plex) 5 Q99JR8 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 OS=Mus musculus OX=10090 GN=Smarcd2 PE=1 SV=2 Q3TM59; G3UXC0; Q99JR8; Q99JR8-2; Q3TXH6 SWIB domain-containing protein OS=Mus musculus OX=10090 GN=Smarcd2 PE=2 SV=1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 (Fragment) OS=Mus musculus OX=10090 GN=Smarcd2 PE=1 SV=1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 OS=Mus musculus OX=10090 GN=Smarcd2 PE=1 SV=2; Isoform 2 of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 OS=Mus musculus OX=10090 GN=Smarcd2; SWIB domain-containing protein OS=Mus musculus OX=10090 GN=Smarcd2 PE=2 SV=1 0 4 4 0.6695 0 1 1 1 366.43918 1462.73488 1462.73485 0.02 0.00001 0/0 0 0 3689699.25 HCD 30 MS2 19.51152 110.7 110 27.2737 4857 4857 4855 QEplus033719.raw F4 177 90.3 103.1 72.3 116.9 104.8 157 4.78 1 FALSE 1.14E-05 1.04E-05 1.044 -250 6378 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHRVPCGQNTR [R].sHRVPcGQNTR.[F] N-Term(TMT6plex); C6(Carbamidomethyl) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 1 4 4 0.6351 0 1 1 1 385.95456 1540.79641 1540.79641 0 0 0/0 0 0 5190397 HCD 30 MS2 36.835 173.4 110 27.2762 4858 4858 4855 QEplus033719.raw F4 205.8 100.5 166.2 238.2 132.1 197.5 229 3.48 2 FALSE 4.43E-05 0.001484 0.626 -250 6403 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQPDTSTR [R].nQPDTSTR.[V] N-Term(TMT6plex) 3 A0A3Q4EGL6 Sulfhydryl oxidase OS=Mus musculus OX=10090 GN=Gfer PE=1 SV=1 A0A3Q4EGL6; A0A3Q4EII8; P56213 Sulfhydryl oxidase OS=Mus musculus OX=10090 GN=Gfer PE=1 SV=1; Sulfhydryl oxidase OS=Mus musculus OX=10090 GN=Gfer PE=1 SV=1; FAD-linked sulfhydryl oxidase ALR OS=Mus musculus OX=10090 GN=Gfer PE=1 SV=2 0 2 2 0.5639 0 1 1 1 574.29834 1147.5894 1147.59048 -0.94 -0.00054 0/0 0 0 450976.1875 HCD 30 MS2 0 57 110 27.2912 4864 4864 4855 QEplus033719.raw F4 72.1 49.6 52.5 49.5 61.7 56.9 175 2.66 1 FALSE 5.44E-05 0.002584 0.573 -250 6409 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSAESSQPER [K].nSAESSQPER.[T] N-Term(TMT6plex) 2 Q3UHX0 Nucleolar protein 8 OS=Mus musculus OX=10090 GN=Nol8 PE=1 SV=2 Q3UHX0; E9QKD1 Nucleolar protein 8 OS=Mus musculus OX=10090 GN=Nol8 PE=1 SV=2; Nucleolar protein 8 OS=Mus musculus OX=10090 GN=Nol8 PE=1 SV=1 0 2 2 0.5559 0 1 1 1 667.33246 1333.65764 1333.65454 2.33 0.00155 0/0 0 0 401765.9375 HCD 30 MS2 60.52822 71.6 110 27.2937 4865 4865 4855 QEplus033719.raw F4 76.9 59.4 76.7 60 87.3 69.2 102 3.4 1 FALSE 1.14E-05 2.60E-07 1.348 -250 6412 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGESRPPR [R].tGESRPPR.[S] N-Term(TMT6plex) 4 Q9Z0H1 WD repeat-containing protein 46 OS=Mus musculus OX=10090 GN=Wdr46 PE=2 SV=1 Q9Z0H1; A0A068BFS0; A0A068BIU7; Q3UM80 WD repeat-containing protein 46 OS=Mus musculus OX=10090 GN=Wdr46 PE=2 SV=1; WD repeat domain 46 OS=Mus musculus OX=10090 GN=Wdr46 PE=2 SV=1; Putative WD repeat domain 46 isoform 1 OS=Mus musculus OX=10090 GN=Wdr46 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr46 PE=2 SV=1 0 3 3 0.541 0 1 1 1 376.88269 1128.63352 1128.63229 1.09 0.00041 0/0 0 0 2103311.75 HCD 30 MS2 52.48917 247.1 110 27.301 4867 4867 4866 QEplus033719.raw F4 409.7 143.5 227.6 163.6 227.3 310.9 203 2.44 1 FALSE 0.001506 0.02232 0.263 -250 6420 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHEGARPMR [K].aHEGARPMR.[A] N-Term(TMT6plex) 5 Q3TF74; Q9WUM3 Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1;Coronin-1B OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1 Q3TF74; Q5PPQ7; Q9WUM4; A0A494B9Y4; Q9WUM3 Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin-1C OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=2; Coronin (Fragment) OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1; Coronin-1B OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1 0 3 3 0.6514 0 1 1 1 418.56284 1253.67395 1253.67344 0.41 0.00017 0/0 0 0 3476541 HCD 30 MS2 22.69901 205.7 110 27.306 4869 4869 4866 QEplus033719.raw F4 227.5 203.9 236.5 138.4 287.1 140.7 277 3.7 2 FALSE 1.14E-05 1.86E-06 1.186 -250 6435 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRPSQEPTR [R].sRPSQEPTR.[K] N-Term(TMT6plex) 3 Q3TYL7 DnaJ homolog subfamily B member 1 OS=Mus musculus OX=10090 GN=Dnajb1 PE=1 SV=1 Q3TYL7; Q3TU79; Q3TIT6 DnaJ homolog subfamily B member 1 OS=Mus musculus OX=10090 GN=Dnajb1 PE=1 SV=1; J domain-containing protein OS=Mus musculus OX=10090 GN=Dnajb1 PE=1 SV=1; J domain-containing protein OS=Mus musculus OX=10090 GN=Dnajb1 PE=2 SV=1 0 3 3 0.5467 0 1 1 1 429.57156 1286.70014 1286.70143 -1 -0.00043 0/0 0 0 1606527.25 HCD 30 MS2 24.38575 122.7 110 27.3134 4872 4872 4866 QEplus033719.raw F4 143.5 98.6 130.4 105.3 136.8 121.4 291 3.75 1 FALSE 1.14E-05 5.64E-06 1.095 -250 6450 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DATESTAR [K].dATESTAR.[V] N-Term(TMT6plex) 2 O55201 Transcription elongation factor SPT5 OS=Mus musculus OX=10090 GN=Supt5h PE=1 SV=1 O55201-2; O55201 Isoform 2 of Transcription elongation factor SPT5 OS=Mus musculus OX=10090 GN=Supt5h; Transcription elongation factor SPT5 OS=Mus musculus OX=10090 GN=Supt5h PE=1 SV=1 0 2 2 0.5824 0 1 1 1 540.2804 1079.55351 1079.55303 0.45 0.00024 0/0 0 0 917792.6875 HCD 30 MS2 20.57038 78.2 110 27.3184 4874 4874 4866 QEplus033719.raw F4 120.2 71.5 89 51.3 57.7 79.5 127 2.73 1 FALSE 1.14E-05 7.89E-05 0.877 -250 6460 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENQHNMEQR [R].eNQHNMEQR.[Q] N-Term(TMT6plex) 1 Q63918 Caveolae-associated protein 2 OS=Mus musculus OX=10090 GN=Cavin2 PE=1 SV=3 Q63918 Caveolae-associated protein 2 OS=Mus musculus OX=10090 GN=Cavin2 PE=1 SV=3 0 3 3 0.7261 0 1 1 1 472.22864 1414.67136 1414.66948 1.33 0.00063 0/0 0 0 788254.375 HCD 30 MS2 22.72425 78.3 110 27.3209 4875 4875 4866 QEplus033719.raw F4 89.6 37.3 97.4 73.9 70.5 101.1 58 3.98 1 FALSE 1.14E-05 6.05E-05 0.899 -250 6473 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QESEQGPCRR [R].qESEQGPcRR.[H] N-Term(TMT6plex); C8(Carbamidomethyl) 2 Q3UQV0 Insulin-like growth factor-binding protein 5 OS=Mus musculus OX=10090 GN=Igfbp5 PE=1 SV=1 Q3TT49; Q3UQV0 Thyroglobulin type-1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Igfbp5 PE=2 SV=1; Insulin-like growth factor-binding protein 5 OS=Mus musculus OX=10090 GN=Igfbp5 PE=1 SV=1 1 3 3 0.7295 0 1 1 1 492.57928 1475.7233 1475.72224 0.72 0.00035 0/0 0 0 2170324.75 HCD 30 MS2 7.291899 122.6 110 27.3308 4878 4878 4877 QEplus033719.raw F4 174.8 35.4 77.5 211.4 118.1 118.4 98 3.29 1 FALSE 1.14E-05 2.29E-05 0.979 -250 6490 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCSEVRR [K].scSEVRR.[L] N-Term(TMT6plex); C2(Carbamidomethyl) 1 P51655 Glypican-4 OS=Mus musculus OX=10090 GN=Gpc4 PE=1 SV=2 P51655 Glypican-4 OS=Mus musculus OX=10090 GN=Gpc4 PE=1 SV=2 1 3 3 0.2851 0 1 1 1 374.86768 1122.58847 1122.58871 -0.21 -0.00008 0/0 0 0 2421654.5 HCD 30 MS2 65.3897 250 110 27.3382 4881 4881 4877 QEplus033719.raw F4 365.5 156.5 294.3 197.7 234.5 251.6 200 2.42 1 FALSE 0.001117 0.01467 0.337 -250 6499 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGTPAGSTR [K].gGTPAGSTR.[G] N-Term(TMT6plex) 4 E9PWE8 Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 Q3TAS8; E9PWE8; Q62188; Q3TT92 Amidohydro-rel domain-containing protein OS=Mus musculus OX=10090 GN=Dpysl3 PE=2 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 0 2 2 0.5401 0 1 1 1 516.78613 1032.56499 1032.56354 1.41 0.00073 0/0 0 0 895298.5625 HCD 30 MS2 31.64193 148.8 110 27.3407 4882 4882 4877 QEplus033719.raw F4 259.7 106.6 172.7 100 129.3 124.6 263 2.87 1 FALSE 9.73E-05 0.002886 0.562 -250 6514 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQAQQEEQR [R].eQAQQEEQR.[E] N-Term(TMT6plex) 12 Q9R210 Transcription factor EB OS=Mus musculus OX=10090 GN=Tfeb PE=1 SV=2 Q9R210; D3Z6Q7; Q8C5F1; D3Z219; D3Z782; Q6P203; E9PXZ1; Q3U327; D3YZM7; D3Z1X9; Q3UKG7; E9PWJ9 Transcription factor EB OS=Mus musculus OX=10090 GN=Tfeb PE=1 SV=2; Transcription factor EB OS=Mus musculus OX=10090 GN=Tfeb PE=1 SV=1; BHLH domain-containing protein OS=Mus musculus OX=10090 GN=Tfeb PE=2 SV=1; Transcription factor EB (Fragment) OS=Mus musculus OX=10090 GN=Tfeb PE=1 SV=1; Transcription factor EB (Fragment) OS=Mus musculus OX=10090 GN=Tfeb PE=1 SV=1; Transcription factor EB OS=Mus musculus OX=10090 GN=Tfeb PE=2 SV=1; Transcription factor EB (Fragment) OS=Mus musculus OX=10090 GN=Tfeb PE=1 SV=1; BHLH domain-containing protein OS=Mus musculus OX=10090 GN=Tfeb PE=2 SV=1; Transcription factor EB (Fragment) OS=Mus musculus OX=10090 GN=Tfeb PE=1 SV=1; Transcription factor EB (Fragment) OS=Mus musculus OX=10090 GN=Tfeb PE=1 SV=1; Transcription factor EB OS=Mus musculus OX=10090 GN=Tfeb PE=1 SV=1; Transcription factor EB (Fragment) OS=Mus musculus OX=10090 GN=Tfeb PE=1 SV=1 0 2 2 0.679 0 1 1 1 687.84216 1374.67705 1374.68109 -2.94 -0.00202 0/0 0 0 462138.0625 HCD 30 MS2 0 20.3 110 27.3457 4884 4884 4877 QEplus033719.raw F4 19 13.7 23.5 20.1 22.9 22.6 102 2.43 1 FALSE 1.14E-05 0.0006849 0.695 -250 6528 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HREEAYENQR [R].hREEAYENQR.[W] N-Term(TMT6plex) 1 Q80VP0 Tectonin beta-propeller repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Tecpr1 PE=1 SV=1 Q80VP0 Tectonin beta-propeller repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Tecpr1 PE=1 SV=1 1 3 3 0.6909 0 1 1 1 520.92865 1560.7714 1560.77163 -0.15 -0.00008 0/0 0 0 889039.6875 HCD 30 MS2 17.03307 49.8 110 27.3507 4886 4886 4877 QEplus033719.raw F4 48.6 32 50 43.2 40.6 84.7 125 3.72 1 FALSE 1.14E-05 8.65E-07 1.249 -250 6554 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSCEQAGAR [K].tScEQAGAR.[I] N-Term(TMT6plex); C3(Carbamidomethyl) 6 Q9D666 SUN domain-containing protein 1 OS=Mus musculus OX=10090 GN=Sun1 PE=1 SV=2 Q9D666; Q9D666-3; F6RMJ1; Q9D666-4; Q9D666-2; Q9D666-5 SUN domain-containing protein 1 OS=Mus musculus OX=10090 GN=Sun1 PE=1 SV=2; Isoform 3 of SUN domain-containing protein 1 OS=Mus musculus OX=10090 GN=Sun1; SUN domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Sun1 PE=1 SV=1; Isoform 4 of SUN domain-containing protein 1 OS=Mus musculus OX=10090 GN=Sun1; Isoform 2 of SUN domain-containing protein 1 OS=Mus musculus OX=10090 GN=Sun1; Isoform 5 of SUN domain-containing protein 1 OS=Mus musculus OX=10090 GN=Sun1 0 2 2 0.6826 0 1 1 1 604.79797 1208.58867 1208.5891 -0.36 -0.00022 0/0 0 0 1032868.875 HCD 30 MS2 24.41439 108.1 110 27.3708 4893 4893 4888 QEplus033719.raw F4 145.9 75 140.4 112.8 67.6 107.1 113 3.34 1 FALSE 1.14E-05 5.50E-07 1.287 -250 6576 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANNPEQNR [R].aNNPEQNR.[L] N-Term(TMT6plex) 5 Q78PY7 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 Q78PY7; Q3UZI3; Q3TW51; Q3TRW3; Q3TJ56 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 0 2 2 0.6769 0 1 1 1 586.30475 1171.60222 1171.60171 0.43 0.00025 0/0 0 0 2527477.25 HCD 30 MS2 6.615099 228.5 110 27.3783 4896 4896 4888 QEplus033719.raw F4 339.8 172.9 297.4 180.1 168.7 212.4 115 2.6 1 FALSE 2.26E-05 0.001102 0.654 -250 6591 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENQHNMEQR [R].eNQHNMEQR.[Q] N-Term(TMT6plex) 1 Q63918 Caveolae-associated protein 2 OS=Mus musculus OX=10090 GN=Cavin2 PE=1 SV=3 Q63918 Caveolae-associated protein 2 OS=Mus musculus OX=10090 GN=Cavin2 PE=1 SV=3 0 2 2 0.7543 0 1 1 1 707.83777 1414.66826 1414.66948 -0.86 -0.00061 0/0 0 0 881937.25 HCD 30 MS2 0 60.1 110 27.3833 4898 4898 4888 QEplus033719.raw F4 68.7 44.3 69.2 58.2 59.3 60.9 51 3.5 1 FALSE 1.14E-05 4.75E-07 1.299 -250 6607 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPETAAQR [R].rPETAAQR.[C] N-Term(TMT6plex) 3 Q4FK57 Ero1l protein OS=Mus musculus OX=10090 GN=Ero1a PE=1 SV=1 Q4FK57; Q3TXL0; Q4FJZ3 Ero1l protein OS=Mus musculus OX=10090 GN=Ero1a PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ero1a PE=2 SV=1; Ero1l protein OS=Mus musculus OX=10090 GN=Ero1a PE=2 SV=1 0 3 3 0.468 0 1 1 1 386.55768 1157.65848 1157.65884 -0.31 -0.00012 0/0 0 0 5797948.5 HCD 30 MS2 71.47824 302.7 110 27.3957 4902 4902 4899 QEplus033719.raw F4 416.1 192.7 312.6 422.5 195.6 276.6 219 3.91 1 FALSE 0.0002419 0.004865 0.505 -250 6612 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEAEVQR [K].hEAEVQR.[D] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 3 3 0.6957 0 1 1 1 366.53455 1097.58908 1097.59009 -0.91 -0.00033 0/0 0 0 4714017 HCD 30 MS2 33.66176 170.5 110 27.3981 4903 4903 4899 QEplus033719.raw F4 289.7 78.9 178.3 189.9 110.9 175.1 144 3.91 1 FALSE 1.14E-05 9.14E-05 0.865 -250 6618 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQVNER [R].qQVNER.[L] N-Term(TMT6plex) 2 O88990 Alpha-actinin-3 OS=Mus musculus OX=10090 GN=Actn3 PE=2 SV=1 O88990; Q3UYE4 Alpha-actinin-3 OS=Mus musculus OX=10090 GN=Actn3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actn3 PE=2 SV=1 0 2 2 0.3094 0 1 1 1 501.78046 1002.55364 1002.55297 0.66 0.00033 0/0 0 0 3183373 HCD 30 MS2 2.406256 199.9 110 27.4006 4904 4904 4899 QEplus033719.raw F4 415.6 45.7 224.3 157.5 46.9 309.1 216 2.23 1 FALSE 0.002148 0.0407 0.172 -250 6635 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HAQASYR [R].hAQASYR.[Q] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.5495 0 1 1 1 531.28961 1061.57195 1061.56896 2.82 0.00149 0/0 0 0 748109.375 HCD 30 MS2 62.01809 107.5 110 27.4056 4906 4906 4899 QEplus033719.raw F4 166.6 37.8 76.2 210.7 63.2 90.7 222 1.82 2 FALSE 0.0003408 0.006471 0.469 -250 6644 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAGGTGGSGGPAR [R].sAGGTGGSGGPAR.[C] N-Term(TMT6plex) 3 Q8C0E3 E3 ubiquitin-protein ligase TRIM47 OS=Mus musculus OX=10090 GN=Trim47 PE=1 SV=2 Q8C0E3-2; Q8C0E3; Q497Z1 Isoform 2 of E3 ubiquitin-protein ligase TRIM47 OS=Mus musculus OX=10090 GN=Trim47; E3 ubiquitin-protein ligase TRIM47 OS=Mus musculus OX=10090 GN=Trim47 PE=1 SV=2; Trim47 protein (Fragment) OS=Mus musculus OX=10090 GN=Trim47 PE=2 SV=1 0 2 2 0.6829 0 1 1 1 630.82813 1260.64897 1260.64939 -0.33 -0.00021 0/0 0 0 701977.25 HCD 30 MS2 0 69.3 110 27.4081 4907 4907 4899 QEplus033719.raw F4 99.1 53.2 76.7 62.3 65.5 59.2 177 3.91 1 FALSE 1.14E-05 4.66E-11 2.06 -250 6667 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEAEVQR [K].hEAEVQR.[D] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.6076 0 1 1 1 549.29901 1097.59075 1097.59009 0.6 0.00033 0/0 0 0 2631129 HCD 30 MS2 0 158.4 110 27.4205 4911 4911 4910 QEplus033719.raw F4 327.1 47.7 164.3 194.2 47.3 170 137 2.37 1 FALSE 0.0002119 0.004433 0.515 -250 6683 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCYGENHQR [K].ncYGENHQR.[L] N-Term(TMT6plex); C2(Carbamidomethyl) 4 Q3UYM1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nub1 PE=1 SV=1 Q3UYM1; A0JLP6; A0PJ90; A0A0G2JGQ4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nub1 PE=1 SV=1; Nub1 protein (Fragment) OS=Mus musculus OX=10090 GN=Nub1 PE=2 SV=1; Nub1 protein (Fragment) OS=Mus musculus OX=10090 GN=Nub1 PE=2 SV=1; NEDD8 ultimate buster 1 OS=Mus musculus OX=10090 GN=Nub1 PE=1 SV=1 0 3 3 0.8091 0 1 1 1 469.55283 1406.64392 1406.64326 0.47 0.00022 0/0 0 0 5000993 HCD 30 MS2 32.82267 107.1 110 27.4254 4913 4913 4910 QEplus033719.raw F4 107.4 97.5 116 97.8 131.5 92.4 27 4.61 1 FALSE 1.14E-05 4.41E-07 1.305 -250 6689 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDPSCPSQR [R].rDPScPSQR.[A] N-Term(TMT6plex); C5(Carbamidomethyl) 4 E0CXE7 CST complex subunit CTC1 OS=Mus musculus OX=10090 GN=Ctc1 PE=1 SV=1 Q5SUQ9-2; Q5SUQ9-3; E0CXE7; Q5SUQ9 Isoform 2 of CST complex subunit CTC1 OS=Mus musculus OX=10090 GN=Ctc1; Isoform 3 of CST complex subunit CTC1 OS=Mus musculus OX=10090 GN=Ctc1; CST complex subunit CTC1 OS=Mus musculus OX=10090 GN=Ctc1 PE=1 SV=1; CST complex subunit CTC1 OS=Mus musculus OX=10090 GN=Ctc1 PE=1 SV=2 1 3 3 0.6032 0 1 1 1 444.56128 1331.66928 1331.66875 0.4 0.00018 0/0 0 0 2665374 HCD 30 MS2 24.49584 133.8 110 27.4279 4914 4914 4910 QEplus033719.raw F4 165.9 93.1 132.8 103.7 180.1 127.4 124 3.73 1 FALSE 1.14E-05 0.0001391 0.83 -250 6705 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CATREDSPR [K].cATREDSPR.[C] N-Term(TMT6plex); C1(Carbamidomethyl) 7 A2AEX6 Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1 A2AEX6; P97447-2; A2AEY1; P97447; A2AEX7; A2AEX8; A2AEY2 Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1; Isoform 2 of Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1; Four and a half LIM domains protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=8; Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=3; Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1; Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1; Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1 1 3 3 0.4677 0 1 1 1 440.8891 1320.65274 1320.65276 -0.02 -0.00001 0/0 0 0 2072868.625 HCD 30 MS2 30.26543 176.3 110 27.4354 4917 4917 4910 QEplus033719.raw F4 250.2 110.2 168.4 167.4 230.1 131.8 111 2.48 1 FALSE 0.001142 0.01518 0.33 -250 6729 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NADDDRPPRR [R].nADDDRPPRR.[I] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 2 2 0.6163 0 1 1 1 720.87817 1440.74907 1440.7505 -0.99 -0.00072 0/0 0 0 376304.6875 HCD 30 MS2 0 10.1 110 27.4429 4920 4920 4910 QEplus033719.raw F4 11.5 6.4 8.6 9 12.7 12.3 226 2.58 1 FALSE 1.14E-05 0.0001722 0.812 -250 6742 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHTVPAHQDR [K].aHTVPAHQDR.[A] N-Term(TMT6plex) 3 P53702 Holocytochrome c-type synthase OS=Mus musculus OX=10090 GN=Hccs PE=1 SV=2 P53702; Q8BP79; G3UXK7 Holocytochrome c-type synthase OS=Mus musculus OX=10090 GN=Hccs PE=1 SV=2; Holocytochrome c-type synthase OS=Mus musculus OX=10090 GN=Hccs PE=2 SV=1; Holocytochrome c-type synthase OS=Mus musculus OX=10090 GN=Hccs PE=1 SV=1 0 3 3 0.847 0 1 1 1 454.24734 1360.72748 1360.72831 -0.61 -0.00028 0/0 0 0 5666135.5 HCD 30 MS2 3.796626 93.2 110 27.4529 4923 4923 4921 QEplus033719.raw F4 129.7 50.2 78.8 129.7 79.9 90.8 265 4.77 1 FALSE 1.14E-05 1.20E-08 1.603 -250 6749 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGESGRPGRPGER [K].dGESGRPGRPGER.[G] N-Term(TMT6plex) 8 Q7TT32; P04258 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1;SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain" Q8BKY2; Q9CSB7; Q7TT32; Q5DTG2; P04258; Q3UH72; Q8BLW4; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; VWFC domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 4 4 0.5012 0 1 1 1 400.46036 1598.8196 1598.81965 -0.03 -0.00001 0/0 0 0 6881366.5 HCD 30 MS2 18.81923 255.5 110 27.4553 4924 4924 4921 QEplus033719.raw F4 227.5 344.9 311.8 100.8 273.9 273.9 207 4.11 2 TRUE 1.14E-05 4.64E-06 1.111 -250 6757 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREESYSR [R].qREESYSR.[M] N-Term(TMT6plex) 3 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q810V5; Q8VIJ6; Q7TMH7 "Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1; Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1" 1 3 3 0.569 0 1 1 1 428.55634 1283.65445 1283.65414 0.24 0.0001 0/0 0 0 4603900 HCD 30 MS2 0 247.2 110 27.4578 4925 4925 4921 QEplus033719.raw F4 261 221.2 238.3 200 353.3 209.6 160 3.55 1 FALSE 1.14E-05 0.000142 0.828 -250 6761 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQPEHMER [K].rQPEHMER.[R] N-Term(TMT6plex) 1 P70460 Vasodilator-stimulated phosphoprotein OS=Mus musculus OX=10090 GN=Vasp PE=1 SV=4 P70460 Vasodilator-stimulated phosphoprotein OS=Mus musculus OX=10090 GN=Vasp PE=1 SV=4 1 3 3 0.6965 0 1 1 1 437.89838 1311.68058 1311.67892 1.26 0.00055 0/0 0 0 2485374 HCD 30 MS2 59.82399 203.2 110 27.4603 4926 4926 4921 QEplus033719.raw F4 286.3 128 203.1 187.8 215.3 198.7 199 4.25 1 FALSE 1.14E-05 6.12E-06 1.088 -250 6770 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RREELQR [R].rREELQR.[R] N-Term(TMT6plex) 1 Q8BT51 "Cytochrome c oxidase assembly factor 4 homolog, mitochondrial OS=Mus musculus OX=10090 GN=COA4 PE=3 SV=1" Q8BT51 "Cytochrome c oxidase assembly factor 4 homolog, mitochondrial OS=Mus musculus OX=10090 GN=COA4 PE=3 SV=1" 2 3 3 0.0968 0 1 1 1 405.90878 1215.7118 1215.71193 -0.11 -0.00005 0/0 0 0 1152186.5 HCD 30 MS2 46.28916 90.2 110 27.4653 4928 4928 4921 QEplus033719.raw F4 127.2 58.3 88.6 83.1 100.3 83.8 368 2.17 1 FALSE 0.002233 0.04329 0.163 -250 6778 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QESEQGPCRR [R].qESEQGPcRR.[H] N-Term(TMT6plex); C8(Carbamidomethyl) 2 Q3UQV0 Insulin-like growth factor-binding protein 5 OS=Mus musculus OX=10090 GN=Igfbp5 PE=1 SV=1 Q3TT49; Q3UQV0 Thyroglobulin type-1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Igfbp5 PE=2 SV=1; Insulin-like growth factor-binding protein 5 OS=Mus musculus OX=10090 GN=Igfbp5 PE=1 SV=1 1 2 2 0.5441 0 1 1 1 738.36426 1475.72124 1475.72224 -0.68 -0.0005 0/0 0 0 1098803 HCD 30 MS2 7.337281 20.2 110 27.4678 4929 4929 4921 QEplus033719.raw F4 23.8 5.3 11.8 40.1 18.7 21.3 95 2.04 1 FALSE 0.0002909 0.005919 0.48 -250 6787 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHSCYRPR [K].gHScYRPR.[R] N-Term(TMT6plex); C4(Carbamidomethyl) 3 Q5BLK1 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1 Q3TL53; Q5BLK1; Q8BT09 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1 0 3 3 0.5405 0 1 1 1 421.21909 1261.6427 1261.64214 0.45 0.00019 0/0 0 0 2710646 HCD 30 MS2 17.99379 166 110 27.4801 4933 4933 4932 QEplus033719.raw F4 187.5 114.8 164.5 160 216.2 153.1 159 2.59 1 FALSE 1.14E-05 0.0007143 0.692 -250 6798 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGESGRPGRPGER [K].dGESGRPGRPGER.[G] N-Term(TMT6plex) 8 Q7TT32; P04258 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1;SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain" Q8BKY2; Q9CSB7; Q7TT32; Q5DTG2; P04258; Q3UH72; Q8BLW4; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; VWFC domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 3 3 0.5315 0 1 1 1 533.61169 1598.82053 1598.81965 0.55 0.00029 0/0 0 0 9331961 HCD 30 MS2 4.087821 257 110 27.4851 4935 4935 4932 QEplus033719.raw F4 205.9 340.3 348 96.2 268.2 283.6 202 2.86 2 TRUE 0.0008543 0.01183 0.376 -250 6817 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREESYSR [R].qREESYSR.[M] N-Term(TMT6plex) 3 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q810V5; Q8VIJ6; Q7TMH7 "Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1; Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1" 1 2 2 0.479 0 1 1 1 642.33032 1283.65337 1283.65414 -0.6 -0.00039 0/0 0 0 1992575.875 HCD 30 MS2 0 59.8 110 27.4901 4937 4937 4932 QEplus033719.raw F4 64.4 56.4 62.4 43.2 84.8 47.8 154 2.38 1 FALSE 0.0002323 0.004728 0.508 -250 6824 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAAQQENSSPSR [R].sAAQQENSSPSR.[G] N-Term(TMT6plex) 1 Q8BI72 CDKN2A-interacting protein OS=Mus musculus OX=10090 GN=Cdkn2aip PE=1 SV=1 Q8BI72 CDKN2A-interacting protein OS=Mus musculus OX=10090 GN=Cdkn2aip PE=1 SV=1 0 2 2 0.6415 0 1 1 1 745.87372 1490.74016 1490.73966 0.33 0.00025 0/0 0 0 1648167.375 HCD 30 MS2 0 98.8 110 27.4926 4938 4938 4932 QEplus033719.raw F4 99.3 99.7 106.7 83.1 120.4 83.3 163 4.77 1 FALSE 1.14E-05 4.47E-11 2.063 -250 6832 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHCREEMAR [K].aHcREEMAR.[L] N-Term(TMT6plex); C3(Carbamidomethyl) 5 Q7TQK5 Coiled-coil domain-containing protein 93 OS=Mus musculus OX=10090 GN=Ccdc93 PE=1 SV=1 Q7TQK5; Q8R3S9; Q8BWK1; Q8BUE0; E9QAD4 Coiled-coil domain-containing protein 93 OS=Mus musculus OX=10090 GN=Ccdc93 PE=1 SV=1; Coiled-coil domain-containing protein 93 (Fragment) OS=Mus musculus OX=10090 GN=Ccdc93 PE=2 SV=1; Coiled-coil domain-containing protein 93 (Fragment) OS=Mus musculus OX=10090 GN=Ccdc93 PE=2 SV=1; Coiled-coil domain-containing protein 93 OS=Mus musculus OX=10090 GN=Ccdc93 PE=2 SV=1; Coiled-coil domain-containing protein 93 OS=Mus musculus OX=10090 GN=Ccdc93 PE=1 SV=1 1 3 3 0.6285 0 1 1 1 463.5621 1388.67176 1388.67245 -0.5 -0.00023 0/0 0 0 1481516.625 HCD 30 MS2 32.30518 149.7 110 27.4951 4939 4939 4932 QEplus033719.raw F4 227.7 124.2 176.9 110.6 143.3 115.3 81 2.88 1 FALSE 0.0016 0.02501 0.244 -250 6843 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDSDVNNDR [R].sDSDVNNDR.[S] N-Term(TMT6plex) 3 A0A1L1SV73 Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus OX=10090 GN=Usp47 PE=1 SV=1 Q8BY87-2; A0A1L1SV73; Q8BY87 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus OX=10090 GN=Usp47; Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus OX=10090 GN=Usp47 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus OX=10090 GN=Usp47 PE=1 SV=2 0 2 2 0.6422 0 1 1 1 625.79333 1250.57939 1250.58104 -1.32 -0.00082 0/0 0 0 787332.4375 HCD 30 MS2 0 72.2 110 27.5002 4941 4941 4932 QEplus033719.raw F4 103.2 54.7 83.5 61.4 61.3 69.1 39 3.27 1 FALSE 1.14E-05 1.31E-05 1.025 -250 6849 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCYGENHQR [K].ncYGENHQR.[L] N-Term(TMT6plex); C2(Carbamidomethyl) 4 Q3UYM1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nub1 PE=1 SV=1 Q3UYM1; A0JLP6; A0PJ90; A0A0G2JGQ4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nub1 PE=1 SV=1; Nub1 protein (Fragment) OS=Mus musculus OX=10090 GN=Nub1 PE=2 SV=1; Nub1 protein (Fragment) OS=Mus musculus OX=10090 GN=Nub1 PE=2 SV=1; NEDD8 ultimate buster 1 OS=Mus musculus OX=10090 GN=Nub1 PE=1 SV=1 0 2 2 0.8138 0 1 1 1 703.82617 1406.64507 1406.64326 1.28 0.0009 0/0 0 0 618718.875 HCD 30 MS2 0 47.3 110 27.5027 4942 4942 4932 QEplus033719.raw F4 49.5 40.2 50 48.8 54.2 41 27 3.33 1 FALSE 1.14E-05 7.93E-06 1.067 -250 6855 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQPEHMER [K].rQPEHMER.[R] N-Term(TMT6plex) 1 P70460 Vasodilator-stimulated phosphoprotein OS=Mus musculus OX=10090 GN=Vasp PE=1 SV=4 P70460 Vasodilator-stimulated phosphoprotein OS=Mus musculus OX=10090 GN=Vasp PE=1 SV=4 1 2 2 0.5666 0 1 1 1 656.34357 1311.67986 1311.67892 0.72 0.00047 0/0 0 0 1228813.5 HCD 30 MS2 0 28.9 110 27.5101 4944 4944 4943 QEplus033719.raw F4 32.4 14.2 38.3 30.1 31.7 26.4 189 2.93 1 FALSE 0.0003496 0.006917 0.46 -250 6861 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAQENGTGQATSR [R].gAQENGTGQATSR.[N] N-Term(TMT6plex) 2 Q64314 Hematopoietic progenitor cell antigen CD34 OS=Mus musculus OX=10090 GN=Cd34 PE=1 SV=1 Q64314; Q8C2A1 Hematopoietic progenitor cell antigen CD34 OS=Mus musculus OX=10090 GN=Cd34 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cd34 PE=2 SV=1 0 2 2 0.6921 0 1 1 1 753.37927 1505.75127 1505.75056 0.47 0.00035 0/0 0 0 1348122.625 HCD 30 MS2 0 87.9 110 27.5126 4945 4945 4943 QEplus033719.raw F4 83.3 113.2 90.1 74.1 87.6 78.9 162 4.84 1 FALSE 1.14E-05 1.82E-12 2.328 -250 6890 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GASCQGCPNQR [R].gAScQGcPNQR.[L] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl) 2 Q9R060 Cytosolic Fe-S cluster assembly factor NUBP1 OS=Mus musculus OX=10090 GN=Nubp1 PE=1 SV=1 A0A2R8W6X5; Q9R060 Cytosolic Fe-S cluster assembly factor NUBP1 OS=Mus musculus OX=10090 GN=Nubp1 PE=1 SV=1; Cytosolic Fe-S cluster assembly factor NUBP1 OS=Mus musculus OX=10090 GN=Nubp1 PE=1 SV=1 0 2 2 0.8196 0 1 1 1 732.33948 1463.67168 1463.6681 2.45 0.00179 0/0 0 0 1026135.75 HCD 30 MS2 0 97.2 110 27.5251 4950 4950 4943 QEplus033719.raw F4 98.3 95.1 94.5 76.8 131.4 86.9 26 3.88 1 FALSE 1.14E-05 1.33E-06 1.214 -250 6895 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EREQPPR [K].eREQPPR.[F] N-Term(TMT6plex) 9 Q3TMM5; Q3UM20; Q8R326 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1;Paraspeckle component 1 OS=Mus musculus OX=10090 GN=Pspc1 PE=1 SV=1 Q8R326-2; Q3TMM5; Q3TEB0; Q3TTV7; Q3TFC2; Q3UM20; Q8R326; Q3TF40; Q99K48 Isoform 2 of Paraspeckle component 1 OS=Mus musculus OX=10090 GN=Pspc1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; NOPS domain-containing protein OS=Mus musculus OX=10090 GN=Pspc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Paraspeckle component 1 OS=Mus musculus OX=10090 GN=Pspc1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Non-POU domain-containing octamer-binding protein OS=Mus musculus OX=10090 GN=Nono PE=1 SV=3 1 2 2 0.1455 0 1 1 1 570.82001 1140.63274 1140.63229 0.4 0.00023 0/0 0 0 944491.9375 HCD 30 MS2 0 44.2 110 27.5276 4951 4951 4943 QEplus033719.raw F4 56.8 34.7 45.5 35 55 38.2 193 2.13 3 FALSE 0.005181 0.08855 0.038 -250 6908 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGHQDFSR [R].rGHQDFSR.[Q] N-Term(TMT6plex) 1 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 1 3 3 0.5514 0 1 1 1 411.22009 1231.64573 1231.64933 -2.93 -0.0012 0/0 0 0 789648.9375 HCD 30 MS2 58.49037 144.4 110 27.5326 4953 4953 4943 QEplus033719.raw F4 155.2 118.8 134.9 120.1 213.7 123.8 185 3.7 1 FALSE 1.14E-05 0.000305 0.764 -250 6931 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YRQDDDQR [R].yRQDDDQR.[S] N-Term(TMT6plex) 5 Q78PY7 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 Q78PY7; Q3UZI3; Q3TW51; Q3TRW3; Q3TJ56 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 1 3 3 0.5739 0 1 1 1 442.21964 1324.64435 1324.64431 0.03 0.00001 0/0 0 0 5544958 HCD 30 MS2 23.51413 352.5 110 27.545 4957 4957 4954 QEplus033719.raw F4 420.5 275.2 401.7 332.9 399.1 285.3 86 2.84 1 FALSE 7.59E-05 0.002767 0.566 -250 6946 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGSGGSYGR [R].gGSGGSYGR.[G] N-Term(TMT6plex) 1 P35527 "SWISS-PROT:P35527 Tax_Id=9606 Gene_Symbol=KRT9 Keratin, type I cytoskeletal 9" P35527 "SWISS-PROT:P35527 Tax_Id=9606 Gene_Symbol=KRT9 Keratin, type I cytoskeletal 9" 0 2 2 0.5139 0 1 1 1 513.76227 1026.51726 1026.51659 0.65 0.00034 0/0 0 0 1906092.25 HCD 30 MS2 23.18465 187.3 110 27.55 4959 4959 4954 QEplus033719.raw F4 249.9 172.2 152.5 217.8 170.2 161.5 91 2.51 1 TRUE 1.14E-05 0.0002279 0.788 -250 6956 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGESGRPGRPGER [K].dGESGRPGRPGER.[G] N-Term(TMT6plex) 8 Q7TT32; P04258 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1;SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain" Q8BKY2; Q9CSB7; Q7TT32; Q5DTG2; P04258; Q3UH72; Q8BLW4; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; VWFC domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 2 2 0.5019 0 1 1 1 799.91351 1598.81975 1598.81965 0.06 0.00005 0/0 0 0 1637185.375 HCD 30 MS2 0 14.6 110 27.555 4961 4961 4954 QEplus033719.raw F4 10.5 19.5 20.4 6.8 16.1 14.3 207 2.65 2 TRUE 0.0002218 0.004686 0.509 -250 6963 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQANVSR [R].nQANVSR.[Q] N-Term(TMT6plex) 5 A0A140LHU0 Disintegrin and metalloproteinase domain-containing protein 9 OS=Mus musculus OX=10090 GN=Adam9 PE=1 SV=1 A0A140LHU0; E9Q638; Q3U1W3; Q61072; Q3UG15 Disintegrin and metalloproteinase domain-containing protein 9 OS=Mus musculus OX=10090 GN=Adam9 PE=1 SV=1; Disintegrin and metalloproteinase domain-containing protein 9 OS=Mus musculus OX=10090 GN=Adam9 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Adam9 PE=2 SV=1; Disintegrin and metalloproteinase domain-containing protein 9 OS=Mus musculus OX=10090 GN=Adam9 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Adam9 PE=2 SV=1 0 2 2 0.3929 0 1 1 1 509.28586 1017.56444 1017.56387 0.56 0.00028 0/0 0 0 1111475.25 HCD 30 MS2 0 123.6 110 27.5575 4962 4962 4954 QEplus033719.raw F4 201.3 96.8 145.3 86.3 100.4 111.3 224 2.52 1 FALSE 0.0005174 0.008156 0.436 -250 6970 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSGGREDSESPGTQR [K].sSGGREDSESPGTQR.[S] N-Term(TMT6plex) 1 P97825 Jupiter microtubule associated homolog 1 OS=Mus musculus OX=10090 GN=Jpt1 PE=1 SV=3 P97825 Jupiter microtubule associated homolog 1 OS=Mus musculus OX=10090 GN=Jpt1 PE=1 SV=3 1 3 3 0.6862 0 1 1 1 593.62073 1778.84763 1778.84665 0.55 0.00033 0/0 0 0 872784.125 HCD 30 MS2 0 46.1 110 27.56 4963 4963 4954 QEplus033719.raw F4 47.3 35.3 51.6 50.9 44.5 47.1 83 3.25 1 FALSE 1.14E-05 4.81E-07 1.298 -250 6978 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRLEEQQR [R].rRLEEQQR.[R] N-Term(TMT6plex) 21 A0A0A6YW53 Mitogen-activated protein kinase kinase kinase kinase 4 OS=Mus musculus OX=10090 GN=Map4k4 PE=1 SV=1 A0A0A6YW53; P83510-2; B7ZNR9; E0CZD7; A0A0A6YWM8; E0CY98; P97820; A0A0A6YWR8; F8VPL5; E0CZF8; B2RXX2; Q6ZQ68; E9PUL9; B2RUE8; B7ZNR8; P83510; E9PVG7; B2RY17; E0CXD6; B2RQ80; B9EKN8 Mitogen-activated protein kinase kinase kinase kinase 4 OS=Mus musculus OX=10090 GN=Map4k4 PE=1 SV=1; Isoform 2 of Traf2 and NCK-interacting protein kinase OS=Mus musculus OX=10090 GN=Tnik; Map4k4 protein OS=Mus musculus OX=10090 GN=Map4k4 PE=1 SV=1; Traf2 and NCK-interacting protein kinase OS=Mus musculus OX=10090 GN=Tnik PE=1 SV=1; Mitogen-activated protein kinase kinase kinase kinase 4 OS=Mus musculus OX=10090 GN=Map4k4 PE=1 SV=1; Traf2 and NCK-interacting protein kinase OS=Mus musculus OX=10090 GN=Tnik PE=1 SV=1; Mitogen-activated protein kinase kinase kinase kinase 4 OS=Mus musculus OX=10090 GN=Map4k4 PE=1 SV=1; Mitogen-activated protein kinase kinase kinase kinase 4 OS=Mus musculus OX=10090 GN=Map4k4 PE=1 SV=1; Mitogen-activated protein kinase kinase kinase kinase 4 OS=Mus musculus OX=10090 GN=Map4k4 PE=1 SV=2; Traf2 and NCK-interacting protein kinase OS=Mus musculus OX=10090 GN=Tnik PE=1 SV=1; Tnik protein OS=Mus musculus OX=10090 GN=Tnik PE=2 SV=1; MKIAA0687 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0687 PE=4 SV=1; Traf2 and NCK-interacting protein kinase OS=Mus musculus OX=10090 GN=Tnik PE=1 SV=1; Map4k4 protein OS=Mus musculus OX=10090 GN=Map4k4 PE=1 SV=1; Map4k4 protein OS=Mus musculus OX=10090 GN=Map4k4 PE=2 SV=1; Traf2 and NCK-interacting protein kinase OS=Mus musculus OX=10090 GN=Tnik PE=1 SV=2; Mitogen-activated protein kinase kinase kinase kinase 4 OS=Mus musculus OX=10090 GN=Map4k4 PE=1 SV=2; Tnik protein OS=Mus musculus OX=10090 GN=Tnik PE=2 SV=1; Traf2 and NCK-interacting protein kinase OS=Mus musculus OX=10090 GN=Tnik PE=1 SV=1; Tnik protein OS=Mus musculus OX=10090 GN=Tnik PE=1 SV=1; TRAF2 and NCK interacting kinase OS=Mus musculus OX=10090 GN=Tnik PE=1 SV=1 2 3 3 0.1286 0 1 1 1 448.59509 1343.77073 1343.77051 0.16 0.00007 0/0 0 0 789547.1875 HCD 30 MS2 44.83746 81.7 110 27.5625 4964 4964 4954 QEplus033719.raw F4 117.7 54.5 79.2 58.7 93.6 86.8 380 2.1 1 FALSE 0.001894 0.03201 0.207 -250 6987 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YRQDDDQR [R].yRQDDDQR.[S] N-Term(TMT6plex) 5 Q78PY7 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 Q78PY7; Q3UZI3; Q3TW51; Q3TRW3; Q3TJ56 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 1 2 2 0.5 0 1 1 1 662.82794 1324.64861 1324.64431 3.25 0.00215 0/0 0 0 3032333 HCD 30 MS2 26.75645 84.2 110 27.5698 4966 4966 4965 QEplus033719.raw F4 93.8 60.1 98.1 90 91.7 71.3 100 2.54 1 FALSE 0.002293 0.04489 0.158 -250 6994 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGEQGEPR [R].dGEQGEPR.[M] N-Term(TMT6plex) 9 Q9WU42 Nuclear receptor corepressor 2 OS=Mus musculus OX=10090 GN=Ncor2 PE=1 SV=3 Q80ZV7; Q9WU42; E9Q9V3; Q9WU42-2; F6YAU7; E9Q701; E9PY55; F6Z4B2; F8VQL9 Ncor2 protein (Fragment) OS=Mus musculus OX=10090 GN=Ncor2 PE=2 SV=1; Nuclear receptor corepressor 2 OS=Mus musculus OX=10090 GN=Ncor2 PE=1 SV=3; Nuclear receptor corepressor 2 OS=Mus musculus OX=10090 GN=Ncor2 PE=1 SV=1; Isoform Beta of Nuclear receptor corepressor 2 OS=Mus musculus OX=10090 GN=Ncor2; Nuclear receptor corepressor 2 (Fragment) OS=Mus musculus OX=10090 GN=Ncor2 PE=1 SV=2; Nuclear receptor corepressor 2 OS=Mus musculus OX=10090 GN=Ncor2 PE=1 SV=1; Nuclear receptor corepressor 2 OS=Mus musculus OX=10090 GN=Ncor2 PE=1 SV=1; Nuclear receptor corepressor 2 (Fragment) OS=Mus musculus OX=10090 GN=Ncor2 PE=1 SV=1; Nuclear receptor corepressor 2 OS=Mus musculus OX=10090 GN=Ncor2 PE=1 SV=1 0 2 2 0.5141 0 1 1 1 558.77795 1116.54863 1116.54828 0.31 0.00017 0/0 0 0 611999.4375 HCD 30 MS2 74.18647 90 110 27.5723 4967 4967 4965 QEplus033719.raw F4 100.3 87.8 98.6 59.8 114.9 78.8 57 2.49 1 FALSE 1.14E-05 7.56E-05 0.88 -250 6997 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVAHGDGDTQR [K].aVAHGDGDTQR.[D] N-Term(TMT6plex) 5 Q3UHT6 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1 Q3UHT6; P19096; Q3TB22; O89060; A0A0U1RNJ1 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2; Fatty acid synthase (Fragment) OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase (Fragment) OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=1 0 3 3 0.6706 0 1 1 1 452.56711 1355.68677 1355.68651 0.2 0.00009 0/0 0 0 22936172 HCD 30 MS2 50.09312 198.3 26.856 27.5746 4968 4968 4965 QEplus033719.raw F4 283.8 71 133.6 439.2 105.1 156.9 122 4.25 1 FALSE 1.14E-05 1.44E-06 1.207 -250 7007 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HPRPAAQPSAR [R].hPRPAAQPSAR.[R] N-Term(TMT6plex) 4 Q791T5 Mitochondrial carrier homolog 1 OS=Mus musculus OX=10090 GN=Mtch1 PE=1 SV=1 Q791T5-2; Q8CEY5; Q791T5; A0A3Q4EC97 Isoform 2 of Mitochondrial carrier homolog 1 OS=Mus musculus OX=10090 GN=Mtch1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mtch1 PE=2 SV=1; Mitochondrial carrier homolog 1 OS=Mus musculus OX=10090 GN=Mtch1 PE=1 SV=1; Mitochondrial carrier homolog 1 (Fragment) OS=Mus musculus OX=10090 GN=Mtch1 PE=1 SV=1 0 3 3 0.5775 0 1 1 1 472.93924 1416.80317 1416.80215 0.72 0.00034 0/0 0 0 3154675 HCD 30 MS2 28.22372 231.3 110 27.5796 4970 4970 4965 QEplus033719.raw F4 318.3 157.5 250.2 207.9 219.1 235.1 400 4 1 FALSE 1.14E-05 1.78E-05 1 -250 7014 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVAHGDGDTQR [K].aVAHGDGDTQR.[D] N-Term(TMT6plex) 5 Q3UHT6 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1 Q3UHT6; P19096; Q3TB22; O89060; A0A0U1RNJ1 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2; Fatty acid synthase (Fragment) OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase (Fragment) OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=1 0 2 2 0.626 0 1 1 1 678.34692 1355.68657 1355.68651 0.05 0.00003 0/0 0 0 2235144.75 HCD 30 MS2 25.48959 86.9 110 27.5846 4972 4972 4965 QEplus033719.raw F4 126.6 50.4 91.5 107 69.2 76.7 122 3.77 1 FALSE 1.14E-05 5.15E-09 1.672 -250 7030 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGTEEASEGGR [R].gGGTEEASEGGR.[G] N-Term(TMT6plex) 3 Q3TT61 Uncharacterized protein OS=Mus musculus OX=10090 GN=Txlng PE=2 SV=1 Q3TT61; Q8BHN1-3; Q8BHN1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Txlng PE=2 SV=1; Isoform 3 of Gamma-taxilin OS=Mus musculus OX=10090 GN=Txlng; Gamma-taxilin OS=Mus musculus OX=10090 GN=Txlng PE=1 SV=1 0 2 2 0.7536 0 1 1 1 668.3205 1335.63371 1335.6338 -0.07 -0.00004 0/0 0 0 894716.875 HCD 30 MS2 8.716294 45.5 110 27.5921 4975 4975 4965 QEplus033719.raw F4 54.5 31.1 48.6 43.1 47 48.8 49 3.45 1 FALSE 1.14E-05 9.83E-12 2.188 -250 7041 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGMNVAR [K].sGmNVAR.[L] N-Term(TMT6plex); M3(Oxidation) 8 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm A0A1L1ST52; P52480; A0A1L1SU37; A0A1L1SSN6; A0A1L1SUV0; A0A1L1SQV8; P52480-2; A0A1L1STV8 Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1 0 2 2 0.2588 0 1 1 1 490.26318 979.51909 979.51923 -0.14 -0.00007 0/0 0 0 22382330 HCD 30 MS2 3.900474 462.9 62.045 27.6017 4978 4978 4976 QEplus033719.raw F4 522.4 373.8 513.6 386.6 548.6 432.3 98 1.7 2 FALSE 0.00557 0.09395 0.023 -250 7049 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEAEVQR [K].hEAEVQR.[D] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 3 3 0.3964 0 1 1 1 366.53644 1097.59476 1097.59009 4.26 0.00156 0/0 0 0 10413296 HCD 30 MS2 48.46547 215.6 82.954 27.604 4979 4979 4976 QEplus033719.raw F4 400.9 114 217.9 215 131 214.7 159 3.86 1 FALSE 1.14E-05 6.00E-05 0.899 -250 7064 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAQENGTGQATSR [R].gAQENGTGQATSR.[N] N-Term(TMT6plex) 2 Q64314 Hematopoietic progenitor cell antigen CD34 OS=Mus musculus OX=10090 GN=Cd34 PE=1 SV=1 Q64314; Q8C2A1 Hematopoietic progenitor cell antigen CD34 OS=Mus musculus OX=10090 GN=Cd34 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cd34 PE=2 SV=1 0 2 2 0.6623 0 1 1 1 753.37909 1505.7509 1505.75056 0.23 0.00017 0/0 0 0 3726792.75 HCD 30 MS2 0 232.8 110 27.6115 4982 4982 4976 QEplus033719.raw F4 205 316.7 235.4 205.5 233.3 201 159 4.56 1 FALSE 1.14E-05 3.36E-11 2.087 -250 7081 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQGETEDSER [K].aQGETEDSER.[L] N-Term(TMT6plex) 4 B1AQH6 Mediator of RNA polymerase II transcription subunit 1 OS=Mus musculus OX=10090 GN=Med1 PE=1 SV=1 Q925J9-2; B1AQH6; Q925J9-3; Q925J9 Isoform 2 of Mediator of RNA polymerase II transcription subunit 1 OS=Mus musculus OX=10090 GN=Med1; Mediator of RNA polymerase II transcription subunit 1 OS=Mus musculus OX=10090 GN=Med1 PE=1 SV=1; Isoform 3 of Mediator of RNA polymerase II transcription subunit 1 OS=Mus musculus OX=10090 GN=Med1; Mediator of RNA polymerase II transcription subunit 1 OS=Mus musculus OX=10090 GN=Med1 PE=1 SV=2 0 2 2 0.7247 0 1 1 1 675.82025 1350.63323 1350.63347 -0.18 -0.00012 0/0 0 0 2822483 HCD 30 MS2 9.705525 115.4 110 27.6165 4984 4984 4976 QEplus033719.raw F4 120 102.6 122.9 82.8 168.9 95.2 46 3.96 1 FALSE 1.14E-05 7.38E-08 1.452 -250 7087 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGHQDFSR [R].rGHQDFSR.[Q] N-Term(TMT6plex) 1 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 1 2 2 0.446 0 1 1 1 616.328 1231.64873 1231.64933 -0.49 -0.0003 0/0 0 0 1918366 HCD 30 MS2 5.394118 65 110 27.619 4985 4985 4976 QEplus033719.raw F4 66.8 55.9 57.1 61 102.4 46.9 212 2.13 1 FALSE 3.35E-05 0.001208 0.645 -250 7114 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGDRYEDR [R].gGGDRYEDR.[Y] N-Term(TMT6plex) 8 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 3 3 0.6 0 1 1 1 418.54053 1253.60703 1253.60719 -0.13 -0.00005 0/0 0 0 11900601 HCD 30 MS2 3.809974 548.3 98.374 27.6337 4990 4990 4987 QEplus033719.raw F4 581.9 420.3 553.9 557.9 654.7 521 85 2.85 1 FALSE 5.44E-05 0.002431 0.579 -250 7120 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRGVEAAR [K].sRGVEAAR.[ED] N-Term(TMT6plex) 7 P06745 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4 Q3ZBD7; B2RXT5; P06745; A0A0U1RQ72; A0A0U1RP97; A0A0U1RQ18; B7ZWL9 SWISS-PROT:Q3ZBD7 (Bos taurus) Glucose-6-phosphate isomerase; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4; Glucose-6-phosphate isomerase 1 OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase 1 (Fragment) OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase (Fragment) OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1 1 3 3 0.2195 0 1 1 1 358.87888 1074.62207 1074.62172 0.33 0.00012 0/0 0 0 9215397 HCD 30 MS2 15.60512 433.9 110 27.6361 4991 4991 4987 QEplus033719.raw F4 641.9 249.9 455 511 361 384.4 272 3.28 1 TRUE 1.14E-05 0.0009246 0.669 -250 7129 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AETEQGEQQR [R].aETEQGEQQR.[Q] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5739 0 1 1 1 702.84991 1404.69255 1404.69165 0.64 0.00045 0/0 0 0 6462517.5 HCD 30 MS2 1.585969 314.3 110 27.6387 4992 4992 4987 QEplus033719.raw F4 360.5 241.7 296 331.5 344.1 312.1 99 3.99 2 FALSE 1.14E-05 3.45E-07 1.325 -250 7138 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARDQGNDSASTAPR [R].aRDQGNDSASTAPR.[S] N-Term(TMT6plex) 8 E9Q0A7 Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=1 Q8C715; Q4KMM3-2; Q4KMM3-4; A0A2R8VI09; Q4KMM3-3; E9Q0A7; A0A2R8W6N3; Q4KMM3 LysM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Oxr1 PE=2 SV=2; Isoform 2 of Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1; Isoform 4 of Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1; Oxidation resistance protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=1; Isoform 3 of Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1; Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=1; Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=1; Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=3 1 3 3 0.7377 0 1 1 1 558.95044 1674.83677 1674.83569 0.64 0.00036 0/0 0 0 4420218 HCD 30 MS2 15.00349 126.3 110 27.6436 4994 4994 4987 QEplus033719.raw F4 119.4 118.9 148.1 92.8 161.5 117.3 163 5.07 1 FALSE 1.14E-05 6.31E-16 3.031 -250 7151 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAQEEAER [R].qAQEEAER.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.7049 0 1 1 1 595.30475 1189.60222 1189.60105 0.99 0.00059 0/0 0 0 2489316.25 HCD 30 MS2 11.22108 321.6 110 27.6511 4997 4997 4987 QEplus033719.raw F4 461.9 269.3 376.5 302.2 252.9 266.6 92 3.05 2 FALSE 1.14E-05 0.0001715 0.812 -250 7157 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQGGYDR [R].sQGGYDR.[Y] N-Term(TMT6plex) 1 Q8BG13 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 Q8BG13 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 0 2 2 0.3684 0 1 1 1 506.25681 1011.50633 1011.50569 0.64 0.00032 0/0 0 0 8725738 HCD 30 MS2 7.70481 556.4 110 27.6585 4999 4999 4998 QEplus033719.raw F4 711.7 533.3 657.7 326.7 695.2 413.6 52 2.47 1 FALSE 0.001736 0.0294 0.219 -250 7163 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHATGAGPAGR [K].aHATGAGPAGR.[Y] N-Term(TMT6plex) 5 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; F6S1V7; F6SX70; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Talin-1 (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=1; Talin-1 (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.6346 0 1 1 1 597.83093 1194.65459 1194.65408 0.42 0.00025 0/0 0 0 2388286.5 HCD 30 MS2 0 129.3 110 27.661 5000 5000 4998 QEplus033719.raw F4 184.9 95.9 91.4 160.2 209.5 34.1 257 3.12 1 FALSE 1.14E-05 3.17E-08 1.522 -250 7173 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HPRPAAQPSAR [R].hPRPAAQPSAR.[R] N-Term(TMT6plex) 4 Q791T5 Mitochondrial carrier homolog 1 OS=Mus musculus OX=10090 GN=Mtch1 PE=1 SV=1 Q791T5-2; Q8CEY5; Q791T5; A0A3Q4EC97 Isoform 2 of Mitochondrial carrier homolog 1 OS=Mus musculus OX=10090 GN=Mtch1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mtch1 PE=2 SV=1; Mitochondrial carrier homolog 1 OS=Mus musculus OX=10090 GN=Mtch1 PE=1 SV=1; Mitochondrial carrier homolog 1 (Fragment) OS=Mus musculus OX=10090 GN=Mtch1 PE=1 SV=1 0 4 4 0.6605 0 1 1 1 354.95624 1416.80312 1416.80215 0.69 0.00024 0/0 0 0 25350252 HCD 30 MS2 5.316032 129.6 37.586 27.6632 5001 5001 4998 QEplus033719.raw F4 152.4 83.6 159.3 121.1 124.4 136.6 400 4.33 1 FALSE 1.14E-05 0.0002711 0.774 -250 7186 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGESMQPNRR [R].rGESMQPNRR.[A] N-Term(TMT6plex) 2 Q9Z1D1 Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=1 SV=2 Q9Z1D1; Q3THA0 Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=1 SV=2; Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=2 SV=1 2 4 4 0.5375 0 1 1 1 365.69916 1459.7748 1459.77494 -0.1 -0.00004 0/0 0 0 20518730 HCD 30 MS2 34.58996 241.3 51.403 27.6677 5003 5003 4998 QEplus033719.raw F4 424.5 154.9 228.2 184.5 222.6 233.1 271 3.2 1 FALSE 1.14E-05 0.0002875 0.769 -250 7192 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGESMQPNRR [R].rGESMQPNRR.[A] N-Term(TMT6plex) 2 Q9Z1D1 Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=1 SV=2 Q9Z1D1; Q3THA0 Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=1 SV=2; Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=2 SV=1 2 3 3 0.5744 0 1 1 1 487.26324 1459.77518 1459.77494 0.16 0.00008 0/0 0 0 10454850 HCD 30 MS2 13.05034 222.2 110 27.6702 5004 5004 4998 QEplus033719.raw F4 284.5 166.2 227.6 196.4 247.1 211.2 272 3.83 1 FALSE 1.14E-05 2.54E-07 1.35 -250 7200 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AETEQGEQQR [R].aETEQGEQQR.[Q] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.6759 0 1 1 1 468.90247 1404.69284 1404.69165 0.85 0.0004 0/0 0 0 6943182 HCD 30 MS2 3.094694 146.8 110 27.6727 5005 5005 4998 QEplus033719.raw F4 198.6 95.1 142.2 130.9 167.4 146.4 100 4.35 2 FALSE 1.14E-05 0.0001666 0.815 -250 7210 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRGVEAAR [K].sRGVEAAR.[ED] N-Term(TMT6plex) 7 P06745 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4 Q3ZBD7; B2RXT5; P06745; A0A0U1RQ72; A0A0U1RP97; A0A0U1RQ18; B7ZWL9 SWISS-PROT:Q3ZBD7 (Bos taurus) Glucose-6-phosphate isomerase; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4; Glucose-6-phosphate isomerase 1 OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase 1 (Fragment) OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase (Fragment) OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1 1 2 2 0.0798 0 1 1 1 537.8147 1074.62212 1074.62172 0.37 0.0002 0/0 0 0 4395112 HCD 30 MS2 42.30069 416.3 110 27.6777 5007 5007 4998 QEplus033719.raw F4 671.5 242.7 448.3 471.6 250.1 413.4 272 1.88 1 TRUE 0.008678 0.1536 -0.091 -250 7239 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEDVNR [K].gEDVNR.[T] N-Term(TMT6plex) 1 P62774 Myotrophin OS=Mus musculus OX=10090 GN=Mtpn PE=1 SV=2 P62774 Myotrophin OS=Mus musculus OX=10090 GN=Mtpn PE=1 SV=2 0 2 2 0.2611 0 1 1 1 459.74603 918.48479 918.48423 0.61 0.00028 0/0 0 0 7699242 HCD 30 MS2 21.36108 598.5 110 27.6947 5013 5013 5009 QEplus033719.raw F4 1243.9 454.3 702.2 301.6 348.1 540.9 92 2.03 1 FALSE 0.003182 0.06245 0.107 -250 7253 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGGHHELAER [R].qGGHHELAER.[L] N-Term(TMT6plex) 9 Q5DU47 MKIAA0148 protein (Fragment) OS=Mus musculus OX=10090 GN=Git2 PE=2 SV=1 Q5DU47; F6WV69; E9PVA6; Q80XR8; Q9JLQ2; J3QK07; Q3UGB1; F7BIK4; D3Z1I2 MKIAA0148 protein (Fragment) OS=Mus musculus OX=10090 GN=Git2 PE=2 SV=1; ARF GTPase-activating protein GIT2 (Fragment) OS=Mus musculus OX=10090 GN=Git2 PE=1 SV=8; ARF GTPase-activating protein GIT2 OS=Mus musculus OX=10090 GN=Git2 PE=1 SV=1; ARF GTPase-activating protein GIT2 OS=Mus musculus OX=10090 GN=Git2 PE=1 SV=2; ARF GTPase-activating protein GIT2 OS=Mus musculus OX=10090 GN=Git2 PE=1 SV=2; ARF GTPase-activating protein GIT2 OS=Mus musculus OX=10090 GN=Git2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Git2 PE=2 SV=1; ARF GTPase-activating protein GIT2 OS=Mus musculus OX=10090 GN=Git2 PE=1 SV=2; ARF GTPase-activating protein GIT2 OS=Mus musculus OX=10090 GN=Git2 PE=1 SV=1 0 3 3 0.6477 0 1 1 1 454.9072 1362.70703 1362.70758 -0.4 -0.00018 0/0 0 0 3344820.5 HCD 30 MS2 10.02042 162.5 110 27.6997 5015 5015 5009 QEplus033719.raw F4 193.1 122.3 164.5 152.5 184.2 158.1 209 4.57 1 FALSE 1.14E-05 2.94E-09 1.718 -250 7268 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGDRYEDR [R].gGGDRYEDR.[Y] N-Term(TMT6plex) 8 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 2 2 0.3136 0 1 1 1 627.30774 1253.6082 1253.60719 0.8 0.0005 0/0 0 0 2233926.75 HCD 30 MS2 0 92 110 27.7048 5017 5017 5009 QEplus033719.raw F4 95.9 69.2 91.9 97 111.5 86.7 85 2.2 1 FALSE 0.001231 0.01665 0.314 -250 7292 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDLHQQNR [R].qDLHQQNR.[K] N-Term(TMT6plex) 4 Q8CGC1 Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1 Q8CGC1; O88662; Q8BPC2; O88355 Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1; Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=1 SV=1; Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1; Xmp (Fragment) OS=Mus musculus OX=10090 GN=Xmp PE=4 SV=1 0 3 3 0.6667 0 1 1 1 423.22845 1267.67081 1267.67046 0.27 0.00012 0/0 0 0 18961706 HCD 30 MS2 4.857498 243.8 53.177 27.7193 5022 5022 5020 QEplus033719.raw F4 285.5 175 284.6 310.9 166.8 240 215 3.78 1 FALSE 1.14E-05 0.0002527 0.78 -250 7299 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETSPEQR [R].eTSPEQR.[G] N-Term(TMT6plex) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 2 2 0.3096 0 1 1 1 538.28375 1075.56023 1075.55812 1.96 0.00105 0/0 0 0 19031124 HCD 30 MS2 44.88501 497.9 36.907 27.7216 5023 5023 5020 QEplus033719.raw F4 849.4 206.9 517.8 626.1 199 588.4 217 2.39 1 FALSE 0.004964 0.08656 0.044 -250 7306 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDLHQQNR [R].qDLHQQNR.[K] N-Term(TMT6plex) 4 Q8CGC1 Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1 Q8CGC1; O88662; Q8BPC2; O88355 Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1; Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=1 SV=1; Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1; Xmp (Fragment) OS=Mus musculus OX=10090 GN=Xmp PE=4 SV=1 0 3 3 0.6859 0 1 1 1 423.22845 1267.67081 1267.67046 0.27 0.00012 0/0 0 0 18961706 HCD 30 MS2 5.159638 243.8 47.271 27.7239 5024 5024 5020 QEplus033719.raw F4 285.5 175 284.6 310.9 166.8 240 215 4.33 1 FALSE 1.14E-05 2.78E-05 0.963 -250 7312 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVEREER [K].sVEREER.[G] N-Term(TMT6plex) 4 E9Q6R7 Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 O08614; A0A1W2P7C0; Q61636; E9Q6R7 Cytoskeletal protein OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1; G-utrophin (Predicted protein) OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1; Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 1 3 3 0.2991 0 1 1 1 378.54172 1133.6106 1133.61122 -0.54 -0.00021 0/0 0 0 3403665.25 HCD 30 MS2 35.20327 217.1 110 27.7263 5025 5025 5020 QEplus033719.raw F4 339.6 131.6 219.5 189.8 208.6 213.4 299 2.24 1 FALSE 0.007001 0.1109 -0.022 -250 7321 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDLHQQNR [R].qDLHQQNR.[K] N-Term(TMT6plex) 4 Q8CGC1 Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1 Q8CGC1; O88662; Q8BPC2; O88355 Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1; Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=1 SV=1; Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1; Xmp (Fragment) OS=Mus musculus OX=10090 GN=Xmp PE=4 SV=1 0 2 2 0.6667 0 1 1 1 634.33905 1267.67082 1267.67046 0.29 0.00018 0/0 0 0 1987338.25 HCD 30 MS2 0 116.5 110 27.7289 5026 5026 5020 QEplus033719.raw F4 127.9 87.7 143.1 161.1 75.4 104 215 2.82 1 FALSE 1.14E-05 8.42E-05 0.871 -250 7340 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEESADAR [K].tEESADAR.[R] N-Term(TMT6plex) 7 B9EKB0 Laminin B1 subunit 1 OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1 B9EKB0; Q9CRX6; Q3UR38; E9QN70; P02469; Q3UHL7; Q8K271 Laminin B1 subunit 1 OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1; Laminin subunit beta-1 OS=Mus musculus OX=10090 GN=Lamb1 PE=1 SV=1; Laminin subunit beta-1 OS=Mus musculus OX=10090 GN=Lamb1 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1; Lamb1-1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=2 0 2 2 0.5801 0 1 1 1 554.27911 1107.55095 1107.54795 2.71 0.0015 0/0 0 0 1258146.25 HCD 30 MS2 0 94.3 110 27.7364 5029 5029 5020 QEplus033719.raw F4 150.1 84.3 124.7 58.9 65.1 82.9 100 3.12 1 FALSE 1.14E-05 0.0001675 0.814 -250 7345 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGAAASGASASR [R].qGAAASGASASR.[G] N-Term(TMT6plex) 2 Q8C2N9 DNA mismatch repair protein OS=Mus musculus OX=10090 GN=Msh6 PE=2 SV=1 Q8C2N9; P54276 DNA mismatch repair protein OS=Mus musculus OX=10090 GN=Msh6 PE=2 SV=1; DNA mismatch repair protein Msh6 OS=Mus musculus OX=10090 GN=Msh6 PE=1 SV=3 0 2 2 0.5994 0 1 1 1 631.83502 1262.66277 1262.66504 -1.8 -0.00114 0/0 0 0 1184262.625 HCD 30 MS2 0 136.1 110 27.7389 5030 5030 5020 QEplus033719.raw F4 154.2 136.8 127.5 74.2 252.5 71.7 239 3.42 1 FALSE 1.14E-05 8.05E-11 2.015 -250 7354 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDDRGPPQRPR [R].rDDRGPPQRPR.[L] N-Term(TMT6plex) 8 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 2 3 3 0.658 0 1 1 1 526.96478 1578.87979 1578.87744 1.49 0.00079 0/0 0 0 641495.9375 HCD 30 MS2 44.62252 40.1 110 27.7462 5032 5032 5031 QEplus033719.raw F4 43.1 34.1 50.7 31.1 41.6 40.2 448 4.21 1 FALSE 1.14E-05 2.70E-05 0.965 -250 7368 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QESNEYRR [K].qESNEYRR.[Q] N-Term(TMT6plex) 8 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 1 3 3 0.6886 0 1 1 1 437.56006 1310.66562 1310.66504 0.44 0.00019 0/0 0 0 76878824 HCD 30 MS2 2.308204 485.8 10.709 27.751 5034 5034 5031 QEplus033719.raw F4 503.8 496.9 491.2 400.7 696.4 325.5 151 3.34 2 FALSE 1.14E-05 0.0001556 0.82 -250 7379 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRTPPPR [K].dRTPPPR.[F] N-Term(TMT6plex) 1 Q497N1 40S ribosomal protein S26 OS=Mus musculus OX=10090 GN=Rps26 PE=1 SV=1 Q497N1 40S ribosomal protein S26 OS=Mus musculus OX=10090 GN=Rps26 PE=1 SV=1 1 3 3 0.3918 0 1 1 1 356.54376 1067.61673 1067.61591 0.77 0.00028 0/0 0 0 8193143.5 HCD 30 MS2 40.77622 353.4 77.932 27.7557 5036 5036 5031 QEplus033719.raw F4 895.1 161.9 277.2 220.2 273.3 292.8 125 2.68 1 FALSE 0.001929 0.0331 0.202 -250 7401 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGTATPQR [K].sGTATPQR.[S] N-Term(TMT6plex) 3 Q3TUQ7 Acetyl-CoA carboxylase kinase OS=Mus musculus OX=10090 GN=Prkaa1 PE=1 SV=1 Q3TUQ7; Q8BUX6; Q5EG47 Acetyl-CoA carboxylase kinase OS=Mus musculus OX=10090 GN=Prkaa1 PE=1 SV=1; AdenylateSensor domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Prkaa1 PE=2 SV=1; 5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Mus musculus OX=10090 GN=Prkaa1 PE=1 SV=2 0 2 2 0.3463 0 1 1 1 523.79321 1046.57915 1046.57919 -0.04 -0.00002 0/0 0 0 2408173 HCD 30 MS2 22.78992 211.2 110 27.7656 5040 5040 5031 QEplus033719.raw F4 323 163.5 232.9 196 171 181 283 2.31 1 FALSE 1.14E-05 0.0005013 0.722 -250 7416 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QESNEYRR [K].qESNEYRR.[Q] N-Term(TMT6plex) 8 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 1 2 2 0.3813 0 1 1 1 655.83636 1310.66545 1310.66504 0.31 0.0002 0/0 0 0 17407940 HCD 30 MS2 0 453.7 110 27.7755 5043 5043 5042 QEplus033719.raw F4 462 437.5 464.2 367.8 665 325.5 151 2.57 2 FALSE 5.44E-05 0.002143 0.592 -250 7459 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSGNTSR [R].vSGNTSR.[R] N-Term(TMT6plex) 6 Q9Z204-2; Q9Z204-3 Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc;Isoform 3 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc Q3U6P5; Q9Z204; Q9Z204-5; Q9Z204-2; Q9Z204-4; Q9Z204-3 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Hnrnpc PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc PE=1 SV=1; Isoform 5 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform 4 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform 3 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc 0 2 2 0.3676 0 1 1 1 475.26584 949.5244 949.52642 -2.13 -0.00101 0/0 0 0 1425701 HCD 30 MS2 22.11285 153 110 27.793 5050 5050 5042 QEplus033719.raw F4 296.1 75.8 148.9 68.8 136 192.1 141 2.72 2 FALSE 0.003497 0.0676 0.094 -250 7472 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TADEDRGPR [R].tADEDRGPR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.4644 0 1 1 1 415.88416 1245.63791 1245.63849 -0.47 -0.00019 0/0 0 0 988925.5625 HCD 30 MS2 30.33951 162.6 110 27.7979 5052 5052 5042 QEplus033719.raw F4 262.1 114.3 140.2 133.1 193.4 132.2 149 3.23 1 FALSE 3.35E-05 0.001217 0.645 -250 7489 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDDRGPPQRPR [R].rDDRGPPQRPR.[L] N-Term(TMT6plex) 8 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 2 4 4 0.637 0 1 1 1 395.47534 1578.87954 1578.87744 1.33 0.00053 0/0 0 0 5779979.5 HCD 30 MS2 41.89816 126.1 110 27.8102 5056 5056 5053 QEplus033719.raw F4 190.3 92.1 137.8 80.9 134.8 120.5 447 4.49 1 FALSE 1.14E-05 0.0002 0.799 -250 7519 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EREQPPR [K].eREQPPR.[F] N-Term(TMT6plex) 9 Q3TMM5; Q3UM20; Q8R326 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1;Paraspeckle component 1 OS=Mus musculus OX=10090 GN=Pspc1 PE=1 SV=1 Q8R326-2; Q3TMM5; Q3TEB0; Q3TTV7; Q3TFC2; Q3UM20; Q8R326; Q3TF40; Q99K48 Isoform 2 of Paraspeckle component 1 OS=Mus musculus OX=10090 GN=Pspc1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; NOPS domain-containing protein OS=Mus musculus OX=10090 GN=Pspc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Paraspeckle component 1 OS=Mus musculus OX=10090 GN=Pspc1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Non-POU domain-containing octamer-binding protein OS=Mus musculus OX=10090 GN=Nono PE=1 SV=3 1 3 3 0.0542 0 1 1 1 380.8822 1140.63205 1140.63229 -0.2 -0.00008 0/0 0 0 64249896 HCD 30 MS2 4.455563 282 18.388 27.8275 5062 5062 5061 QEplus033719.raw F4 325.8 237.5 285.3 242.7 388.6 212.1 179 2.95 3 FALSE 0.001108 0.01445 0.34 -250 7555 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDLHQQNR [R].qDLHQQNR.[K] N-Term(TMT6plex) 4 Q8CGC1 Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1 Q8CGC1; O88662; Q8BPC2; O88355 Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1; Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=1 SV=1; Epithelial membrane protein 2 OS=Mus musculus OX=10090 GN=Emp2 PE=2 SV=1; Xmp (Fragment) OS=Mus musculus OX=10090 GN=Xmp PE=4 SV=1 0 3 3 0.6517 0 1 1 1 423.22586 1267.66303 1267.67046 -5.86 -0.00248 0/0 0 0 1540202.625 HCD 30 MS2 16.06827 118.7 110 27.8447 5068 5068 5063 QEplus033719.raw F4 158.1 97.2 129.6 114.3 110.6 102.4 194 4.02 1 FALSE 1.14E-05 0.0001537 0.821 -250 7573 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNDGNSYR [K].sNDGNSYR.[L] N-Term(TMT6plex) 2 Q99LC3 "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial OS=Mus musculus OX=10090 GN=Ndufa10 PE=1 SV=1" A0A087WR38; Q99LC3 "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Ndufa10 PE=1 SV=1; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial OS=Mus musculus OX=10090 GN=Ndufa10 PE=1 SV=1" 0 2 2 0.5167 0 1 1 1 571.27533 1141.54338 1141.54353 -0.13 -0.00007 0/0 0 0 6118811 HCD 30 MS2 45.72173 318.7 110 27.8746 5077 5077 5076 QEplus033719.raw F4 400.8 234.9 336.6 369.2 291.1 279.8 50 2.4 1 FALSE 0.0005944 0.008766 0.425 -250 7581 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQAAAHTDHLR [R].rQAAAHTDHLR.[D] N-Term(TMT6plex) 13 Q8CAQ8; A0A0U1RP81 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1;MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q3U7N2; Q6P8Y5; Q8CAQ8; E9QAY6; Q8CAQ8-2; A0A0U1RP81; Q3TVZ5; Q2YDW0; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1 1 4 4 0.5901 0 1 1 1 376.96292 1504.82985 1504.82942 0.29 0.00011 0/0 0 0 1302665.625 HCD 30 MS2 87.00767 118.1 110 27.8771 5078 5078 5076 QEplus033719.raw F4 161.6 80.4 108 97 106.8 154.7 399 4.66 2 FALSE 1.14E-05 5.01E-05 0.914 -250 7584 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDPDGENARR [K].eDPDGENARR.[A] N-Term(TMT6plex) 9 A2ATP6 Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=2 A2ATP6; Q8C854-1; A7UQY4; Q8C854-3; F6XJA1; A2ATP5; G8JL68; Q8C854; Q8C854-2 Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=2; Isoform 3 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Isoform 2 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2; Myelin expression factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Isoform 4 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 1 3 3 0.4766 0 1 1 1 463.23004 1387.67557 1387.67634 -0.55 -0.00025 0/0 0 0 2117837.5 HCD 30 MS2 0 144.3 110 27.8796 5079 5079 5076 QEplus033719.raw F4 184.7 99.6 142.7 106.9 199 132.8 82 3.84 1 FALSE 1.14E-05 2.28E-09 1.739 -250 7605 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TADEDRGPR [R].tADEDRGPR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 2 2 0.6569 0 1 1 1 623.32251 1245.63774 1245.63849 -0.6 -0.00038 0/0 0 0 924148.8125 HCD 30 MS2 20.74494 37.9 110 27.8871 5082 5082 5076 QEplus033719.raw F4 39 28.6 39.3 36.6 54 29.7 146 2.39 1 FALSE 1.14E-05 0.0006998 0.693 -250 7608 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHQEALHQQR [R].eHQEALHQQR.[L] N-Term(TMT6plex) 2 D3YVW2 Golgi integral membrane protein 4 OS=Mus musculus OX=10090 GN=Golim4 PE=1 SV=1 D3YVW2; Q8BXA1 Golgi integral membrane protein 4 OS=Mus musculus OX=10090 GN=Golim4 PE=1 SV=1; Golgi integral membrane protein 4 OS=Mus musculus OX=10090 GN=Golim4 PE=1 SV=1 0 4 4 0.6659 0 1 1 1 376.95074 1504.78115 1504.7818 -0.44 -0.00016 0/0 0 0 3026105.25 HCD 30 MS2 67.94044 118 110 27.8896 5083 5083 5076 QEplus033719.raw F4 156.9 76.6 113.2 94.5 109.8 157.3 266 4.49 1 FALSE 1.14E-05 4.15E-07 1.31 -250 7614 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHQEALHQQR [R].eHQEALHQQR.[L] N-Term(TMT6plex) 2 D3YVW2 Golgi integral membrane protein 4 OS=Mus musculus OX=10090 GN=Golim4 PE=1 SV=1 D3YVW2; Q8BXA1 Golgi integral membrane protein 4 OS=Mus musculus OX=10090 GN=Golim4 PE=1 SV=1; Golgi integral membrane protein 4 OS=Mus musculus OX=10090 GN=Golim4 PE=1 SV=1 0 3 3 0.7085 0 1 1 1 502.26468 1504.77948 1504.7818 -1.54 -0.00077 0/0 0 0 1167814.875 HCD 30 MS2 68.72865 61.1 110 27.892 5084 5084 5076 QEplus033719.raw F4 57.8 44.8 67.9 56 80.7 59.3 254 4.7 1 FALSE 1.14E-05 1.27E-08 1.598 -250 7630 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRCEAMR [-R].gRcEAMR.[M] N-Term(TMT6plex); C3(Carbamidomethyl) 3 P19157 Glutathione S-transferase P 1 OS=Mus musculus OX=10090 GN=Gstp1 PE=1 SV=2 K9JA74; P19157; Q7M0B8 "GST class-pi (Fragment) OS=Mus musculus OX=10090 GN=Gstp2 PE=2 SV=1; Glutathione S-transferase P 1 OS=Mus musculus OX=10090 GN=Gstp1 PE=1 SV=2; Glutathione transferase class pi (Isoform pI 8.7, male) (Fragment) OS=Mus musculus OX=10090 PE=1 SV=1" 1 3 3 0.4864 0 1 1 1 370.19009 1108.55573 1108.5553 0.39 0.00014 0/0 0 0 7875120 HCD 30 MS2 10.74914 275.9 110 27.9144 5090 5090 5089 QEplus033719.raw F4 357.9 218 294 277.9 287.2 220.3 137 2.57 1 FALSE 0.001231 0.01654 0.315 -250 7673 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RIAHSAETR [K].rIAHSAETR.[V] N-Term(TMT6plex) 5 A0A0G2JFB2 Tudor and KH domain-containing protein OS=Mus musculus OX=10090 GN=Tdrkh PE=1 SV=1 A0A0G2JFB2; A0A0G2JE08; A0A0G2JFE0; Q6PGG8; Q80VL1 Tudor and KH domain-containing protein OS=Mus musculus OX=10090 GN=Tdrkh PE=1 SV=1; Tudor and KH domain-containing protein OS=Mus musculus OX=10090 GN=Tdrkh PE=1 SV=1; Tudor and KH domain-containing protein OS=Mus musculus OX=10090 GN=Tdrkh PE=1 SV=1; Tdrkh protein OS=Mus musculus OX=10090 GN=Tdrkh PE=2 SV=1; Tudor and KH domain-containing protein OS=Mus musculus OX=10090 GN=Tdrkh PE=1 SV=1 1 3 3 0.5117 0 1 1 1 423.91269 1269.72351 1269.7225 0.8 0.00034 0/0 0 0 1292632.25 HCD 30 MS2 56.7084 87 110 27.9294 5096 5096 5089 QEplus033719.raw F4 142.3 63.8 93.2 78.7 73.8 69.9 303 2.99 1 FALSE 1.14E-05 3.49E-05 0.944 -250 7693 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSAGAQGNGAPSGNR [K].gSAGAQGNGAPSGNR.[E] N-Term(TMT6plex) 3 Q53YY4 Progestin and adipoQ receptor family member I OS=Mus musculus OX=10090 GN=Adipor1 PE=2 SV=1 Q53YY4; Q3UPA4; Q3TI02 Progestin and adipoQ receptor family member I OS=Mus musculus OX=10090 GN=Adipor1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Adipor1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Adipor1 PE=2 SV=1 0 2 2 0.6369 0 1 1 1 765.38403 1529.76079 1529.7618 -0.66 -0.0005 0/0 0 0 485856.6563 HCD 30 MS2 0 17.5 110 27.9443 5101 5101 5100 QEplus033719.raw F4 20.1 8.2 18.7 24 10.2 24 135 3.14 1 FALSE 1.14E-05 5.49E-08 1.477 -250 7698 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRSDLSR [K].qRSDLSR.[E] N-Term(TMT6plex) 7 Q5SX40; Q5SX39; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q5SX40; Q5SX39; G3UW82; B2RWX0; I6L963; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 3 3 0.2806 0 1 1 1 364.21002 1090.61551 1090.61664 -1.03 -0.00037 0/0 0 0 2598409.75 HCD 30 MS2 38.51638 191 110 27.9516 5103 5103 5102 QEplus033719.raw F4 501.6 54.9 105.5 273.2 50.8 159.9 259 2.53 3 FALSE 0.00131 0.018 0.3 -250 7705 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERQEAQGECEAR [R].eRQEAQGEcEAR.[G] N-Term(TMT6plex); C9(Carbamidomethyl) 2 B2RTE5 Coiled-coil domain containing 102A OS=Mus musculus OX=10090 GN=Ccdc102a PE=1 SV=1 B2RTE5; A4FUJ5 Coiled-coil domain containing 102A OS=Mus musculus OX=10090 GN=Ccdc102a PE=1 SV=1; Ccdc102a protein (Fragment) OS=Mus musculus OX=10090 GN=Ccdc102a PE=2 SV=1 1 3 3 0.7288 0 1 1 1 564.6037 1691.79654 1691.79686 -0.19 -0.00011 0/0 0 0 2558948.75 HCD 30 MS2 27.75843 64.1 110 27.9541 5104 5104 5102 QEplus033719.raw F4 68.6 58.6 69.8 46.9 83.3 57.3 76 5.42 1 FALSE 1.14E-05 6.71E-14 2.6 -250 7711 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGDRGDRLDR [R].gGDRGDRLDR.[AT] N-Term(TMT6plex) 9 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 Q8R2V4; Q6NZJ6-2; E9Q9E1; Q6PD42; E9PVC5; E9PVC6; A0A0J9YUS5; Q6NZJ6; Q8K0J8 Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 2 3 3 0.3017 0 1 1 1 449.24197 1345.71137 1345.71339 -1.5 -0.00067 0/0 0 0 2760844.25 HCD 30 MS2 10.25932 161.7 110 27.9566 5105 5105 5102 QEplus033719.raw F4 188.8 119.4 164.8 118.4 229.7 149 225 3.48 1 FALSE 0.001266 0.01725 0.307 -250 7718 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HPQRLDR [R].hPQRLDR.[H] N-Term(TMT6plex) 2 Q6P3C8 Heat shock protein 2 OS=Mus musculus OX=10090 GN=Hspb2 PE=2 SV=1 Q6P3C8; Q99PR8 Heat shock protein 2 OS=Mus musculus OX=10090 GN=Hspb2 PE=2 SV=1; Heat shock protein beta-2 OS=Mus musculus OX=10090 GN=Hspb2 PE=1 SV=2 1 3 3 0.221 0 1 1 1 384.22641 1150.66468 1150.66426 0.37 0.00014 0/0 0 0 1443787.625 HCD 30 MS2 40.79962 93.3 110 27.959 5106 5106 5102 QEplus033719.raw F4 146.2 32.8 88.8 124.9 59 108.2 260 1.81 1 FALSE 0.002474 0.04888 0.145 -250 7774 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVEGERR [R].eVEGERR.[A] N-Term(TMT6plex) 5 Q8C7C3; Q58E70 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1 D3Z6I8; Q8C7C3; Q3TJ53; Q58E70; E9Q7Q3 Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1 1 2 2 0.1293 0 1 1 1 552.30237 1103.59746 1103.60065 -2.89 -0.0016 0/0 0 0 1355853.875 HCD 30 MS2 31.59145 96.4 110 27.9939 5117 5117 5115 QEplus033719.raw F4 173.5 85.2 108.4 58.9 78.7 73.7 287 2.32 2 FALSE 0.001028 0.01353 0.352 -250 7790 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEQENEAR [K].eAEQENEAR.[K] N-Term(TMT6plex) 3 Q6ZPF4 Formin-like protein 3 OS=Mus musculus OX=10090 GN=Fmnl3 PE=1 SV=2 Q6ZPF4-2; Q6ZPF4; D3Z7A7 Isoform 2 of Formin-like protein 3 OS=Mus musculus OX=10090 GN=Fmnl3; Formin-like protein 3 OS=Mus musculus OX=10090 GN=Fmnl3 PE=1 SV=2; Formin-like protein 3 OS=Mus musculus OX=10090 GN=Fmnl3 PE=1 SV=1 0 2 2 0.7872 0 1 1 1 652.81665 1304.62602 1304.62799 -1.51 -0.00098 0/0 0 0 1192872.5 HCD 30 MS2 0 66.8 110 28.0014 5120 5120 5115 QEplus033719.raw F4 78.4 75.4 79.4 40.2 89.5 38 51 3.29 1 FALSE 1.14E-05 2.99E-06 1.147 -250 7794 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAASTNPDR [R].sAASTNPDR.[V] N-Term(TMT6plex) 5 Q3V3N5 Nucleolar GTP-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gnl2 PE=2 SV=1 Q3V3N5; Q99LH1; B1ASC2; P70410; Q3UJL0 Nucleolar GTP-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gnl2 PE=2 SV=1; Nucleolar GTP-binding protein 2 OS=Mus musculus OX=10090 GN=Gnl2 PE=1 SV=2; Nucleolar GTP-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gnl2 PE=1 SV=1; Nucleolar GTP-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gnl2 PE=2 SV=1; Nucleolar GTP-binding protein 2 OS=Mus musculus OX=10090 GN=Gnl2 PE=2 SV=1 0 2 2 0.4348 0 1 1 1 574.29822 1147.58916 1147.59048 -1.15 -0.00066 0/0 0 0 1174661.875 HCD 30 MS2 0 75.4 110 28.0039 5121 5121 5115 QEplus033719.raw F4 105.6 55.9 88.1 53.4 72.5 76.8 175 3.22 1 FALSE 1.14E-05 3.07E-07 1.335 -250 7808 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HESCGQCTPCR [K].hEScGQcTPcR.[E] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl); C10(Carbamidomethyl) 3 D3YUM1 "NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1" D3Z1U9; D3YUM1; Q91YT0 "NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1; NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1; NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1" 0 3 3 0.882 0 1 1 1 540.90057 1620.68717 1620.68785 -0.42 -0.00023 0/0 0 0 474024.0938 HCD 30 MS2 34.00669 34.3 110 28.0115 5124 5124 5115 QEplus033719.raw F4 42.8 19 36 44 26.2 37.9 6 4.83 1 FALSE 1.14E-05 5.38E-07 1.288 -250 7820 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHEQLR [R].qHEQLR.[A] N-Term(TMT6plex) 1 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 2 2 0.2601 0 1 1 2 520.29651 1039.58574 1039.58461 1.09 0.00057 0/0 0 0 877189.75 HCD 30 MS2 13.1578 60.1 110 28.0314 5129 5129 5128 QEplus033719.raw F4 99.1 25.8 68.1 61.4 52.8 53.6 136 1.73 1 FALSE 0.005324 0.09073 0.032 -250 7830 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EESSSSSNVSSR [R].eESSSSSNVSSR.[K] N-Term(TMT6plex) 4 Q3UWX7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tcea1 PE=2 SV=1 P10711-2; E9PYD5; Q3UPE0; Q3UWX7 Isoform 1 of Transcription elongation factor A protein 1 OS=Mus musculus OX=10090 GN=Tcea1; Transcription elongation factor A protein 1 OS=Mus musculus OX=10090 GN=Tcea1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tcea1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tcea1 PE=2 SV=1 0 2 2 0.6152 0 1 1 1 742.85498 1484.70268 1484.70261 0.05 0.00004 0/0 0 0 1580117.25 HCD 30 MS2 0 57.8 110 28.0339 5130 5130 5128 QEplus033719.raw F4 59.1 60.5 54.6 41.9 90.3 40.2 64 4.34 1 FALSE 1.14E-05 7.46E-12 2.211 -250 7844 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSQGGPAPR [K].nSQGGPAPR.[E] N-Term(TMT6plex) 5 Q1LZM4 Tnrc6b protein (Fragment) OS=Mus musculus OX=10090 GN=Tnrc6b PE=2 SV=1 Q1LZM4; Q8BKI2; Q8BKI2-2; Q3TRH0; A0A2I3BRG1 Tnrc6b protein (Fragment) OS=Mus musculus OX=10090 GN=Tnrc6b PE=2 SV=1; Trinucleotide repeat-containing gene 6B protein OS=Mus musculus OX=10090 GN=Tnrc6b PE=1 SV=2; Isoform 2 of Trinucleotide repeat-containing gene 6B protein OS=Mus musculus OX=10090 GN=Tnrc6b; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tnrc6b PE=2 SV=1; Trinucleotide repeat-containing gene 6B protein (Fragment) OS=Mus musculus OX=10090 GN=Tnrc6b PE=1 SV=1 0 2 2 0.5125 0 1 1 1 556.80444 1112.60161 1112.60099 0.56 0.00031 0/0 0 0 1040446.5 HCD 30 MS2 0 97.2 110 28.0389 5132 5132 5128 QEplus033719.raw F4 132.2 68.4 105.8 85.8 93 97.9 158 2.4 1 FALSE 1.14E-05 1.50E-05 1.014 -250 7855 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANEDTSTAQR [R].aNEDTSTAQR.[IS] N-Term(TMT6plex) 3 F8VQ29 IQ motif-containing GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Iqgap3 PE=1 SV=1 F8VQ29; A0A0A6YXJ2; B9EKT6 IQ motif-containing GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Iqgap3 PE=1 SV=1; IQ motif-containing GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Iqgap3 PE=1 SV=1; IQ motif containing GTPase activating protein 3 OS=Mus musculus OX=10090 GN=Iqgap3 PE=2 SV=1 0 2 2 0.7182 0 1 1 1 661.33154 1321.65581 1321.65454 0.96 0.00064 0/0 0 0 1357766.25 HCD 30 MS2 0 67.7 110 28.0439 5134 5134 5128 QEplus033719.raw F4 72.5 52 30.5 31.3 182.1 37.7 136 3.69 1 FALSE 1.14E-05 3.48E-09 1.704 -250 7907 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPDEESSQR [K].sPDEESSQR.[F] N-Term(TMT6plex) 5 A0A1Y7VLZ7 Phosphofurin acidic cluster sorting protein 2 OS=Mus musculus OX=10090 GN=Pacs2 PE=1 SV=1 A0A1Y7VLZ7; E9Q7E9; Q3V3Q7; Q6PCX4; Q3V3Y3 Phosphofurin acidic cluster sorting protein 2 OS=Mus musculus OX=10090 GN=Pacs2 PE=1 SV=1; Phosphofurin acidic cluster sorting protein 2 OS=Mus musculus OX=10090 GN=Pacs2 PE=1 SV=1; Phosphofurin acidic cluster sorting protein 2 OS=Mus musculus OX=10090 GN=Pacs2 PE=1 SV=2; Pacs2 protein OS=Mus musculus OX=10090 GN=Pacs2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pacs2 PE=2 SV=1 0 2 2 0.4094 0 1 1 1 632.30646 1263.60564 1263.60144 3.32 0.0021 0/0 0 0 666824.25 HCD 30 MS2 0 42.6 110 28.0713 5144 5144 5139 QEplus033719.raw F4 51 34.5 45.6 30.3 59.6 34.4 72 2.98 1 FALSE 1.14E-05 1.93E-05 0.993 -250 7920 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVDAENR [R].rVDAENR.[L] N-Term(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 1 3 3 0.1994 0 1 1 1 363.53848 1088.60089 1088.60099 -0.08 -0.00003 0/0 0 0 8314268 HCD 30 MS2 49.37181 395.7 110 28.0813 5148 5148 5139 QEplus033719.raw F4 1001.7 168.4 319.4 400 156.6 327.9 211 3.51 1 FALSE 0.0002419 0.00503 0.501 -250 7944 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EESSSSSNVSSR [R].eESSSSSNVSSR.[K] N-Term(TMT6plex) 4 Q3UWX7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tcea1 PE=2 SV=1 P10711-2; E9PYD5; Q3UPE0; Q3UWX7 Isoform 1 of Transcription elongation factor A protein 1 OS=Mus musculus OX=10090 GN=Tcea1; Transcription elongation factor A protein 1 OS=Mus musculus OX=10090 GN=Tcea1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tcea1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tcea1 PE=2 SV=1 0 3 3 0.76 0 1 1 1 495.5726 1484.70325 1484.70261 0.43 0.00021 0/0 0 0 4505529 HCD 30 MS2 3.349969 65 110 28.0986 5154 5154 5150 QEplus033719.raw F4 79.7 56.1 68.9 42.9 89.6 52.9 65 5.5 1 FALSE 1.14E-05 1.74E-07 1.382 -250 7952 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTASSANGPSR [K].dTASSANGPSR.[ND] N-Term(TMT6plex) 3 A6H663 BCL2-associated athanogene 3 OS=Mus musculus OX=10090 GN=Bag3 PE=2 SV=1 Q3TAM9; A6H663; Q9JLV1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Bag3 PE=2 SV=1; BCL2-associated athanogene 3 OS=Mus musculus OX=10090 GN=Bag3 PE=2 SV=1; BAG family molecular chaperone regulator 3 OS=Mus musculus OX=10090 GN=Bag3 PE=1 SV=2 0 2 2 0.7418 0 1 1 1 646.32587 1291.64446 1291.64397 0.37 0.00024 0/0 0 0 2906772 HCD 30 MS2 7.700991 179.9 110 28.1011 5155 5155 5150 QEplus033719.raw F4 221.3 129.9 182 155.2 211 180.3 134 3.64 1 FALSE 1.14E-05 1.93E-08 1.563 -250 7959 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAGGGGGSGEDEAQSR [R].aAGGGGGSGEDEAQSR.[RH] N-Term(TMT6plex) 4 Q9CRA5 Golgi phosphoprotein 3 OS=Mus musculus OX=10090 GN=Golph3 PE=1 SV=1 Q9CRA5; Q05BZ0; Q3TIL4; Q9CRA5-2 Golgi phosphoprotein 3 OS=Mus musculus OX=10090 GN=Golph3 PE=1 SV=1; Golgi phosphoprotein 3 OS=Mus musculus OX=10090 GN=Golph3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Golph3 PE=2 SV=1; Isoform 2 of Golgi phosphoprotein 3 OS=Mus musculus OX=10090 GN=Golph3 0 2 2 0.8171 0 1 1 1 817.88232 1634.75737 1634.75677 0.37 0.0003 0/0 0 0 2033560.5 HCD 30 MS2 0 96.9 110 28.1037 5156 5156 5150 QEplus033719.raw F4 100.6 92.7 100.7 85.5 120.6 81.2 58 5.14 1 FALSE 1.14E-05 6.31E-16 3.576 -250 7991 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSSTSVDNR [R].gSSTSVDNR.[E] N-Term(TMT6plex) 3 A0A1L1SV73 Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus OX=10090 GN=Usp47 PE=1 SV=1 Q8BY87-2; A0A1L1SV73; Q8BY87 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus OX=10090 GN=Usp47; Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus OX=10090 GN=Usp47 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus OX=10090 GN=Usp47 PE=1 SV=2 0 2 2 0.631 0 1 1 1 576.29663 1151.58599 1151.5854 0.51 0.00029 0/0 0 0 2625398.75 HCD 30 MS2 20.63328 148.7 110 28.121 5162 5162 5161 QEplus033719.raw F4 219.2 109.2 159.9 133.7 131.2 139 142 2.9 1 FALSE 1.14E-05 2.07E-05 0.987 -250 7995 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTSEQENPDR [K].gTSEQENPDR.[C] N-Term(TMT6plex) 1 A0A1B0GR85 RIKEN cDNA 2900026A02 gene OS=Mus musculus OX=10090 GN=2900026A02Rik PE=1 SV=1 A0A1B0GR85 RIKEN cDNA 2900026A02 gene OS=Mus musculus OX=10090 GN=2900026A02Rik PE=1 SV=1 0 2 2 0.5275 0 1 1 1 681.32819 1361.6491 1361.64945 -0.26 -0.00018 0/0 0 0 911854.4375 HCD 30 MS2 0 50.7 110 28.1236 5163 5163 5161 QEplus033719.raw F4 46.9 54.2 57.7 48.3 55.5 41.4 48 3.45 1 FALSE 1.14E-05 1.14E-06 1.226 -250 8004 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARDENYR [R].aRDENYR.[A] N-Term(TMT6plex) 62 G3CE24 Vitamin K epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1 G3CE24; A0A7T0LZ52; G3CE17; A0A7T8CZS6; A0A7T8CZD2; A0A7T0LZJ2; G3CE58; A0A7T0LYK6; A0A7T8CZB9; G3CE66; A0A7T0Q280; A0A7T0LYB5; A0A7T8I177; A0A7T8CZC3; A0A7T8D0G3; A0A7T0Q290; A0A7T8CZQ8; G3CE65; G3CE71; A0A7T0LYG0; A0A7T0LYE7; A0A7T8CZE0; A0A7T8CZE2; A0A7T0LYF7; A0A7T0Q291; G3BKB2; A0A7T0Q274; A0A7T0LYF2; A0A7T8I121; A0A7T8CZB6; A0A7T8I0X2; A0A7T0LYF1; A0A7T8CZD3; A0A7T8CZM7; G3CE69; G3CE70; A0A7T8D066; G3CE68; A0A7T0LYI9; A0A7T0LZ78; A0A7T8I118; A0A7T8I144; A0A7T8I0N9; A0A7T8CZC6; A0A7T8I0U4; A0A7T0Q304; A0A7T0LYK8; A0A7T0LYL8; A0A7T8CZC8; A0A7T8I110; G3CE67; A0A7T8CZJ9; A0A7T0Q2L9; G3CDY6; A0A7T0Q2L1; A0A7T8CZH7; A0A7T0Q407; A0A7T0LZK8; A0A7T0LYF5; A0A7T0Q2K5; A0A7T8D0F0; A0A7T8CZH3 "Vitamin K epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 OS=Mus musculus castaneus OX=10091 GN=Vkorc1 PE=4 SV=1; VKORC1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 OS=Mus musculus castaneus OX=10091 GN=Vkorc1 PE=4 SV=1; VKORC1 OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin-K-epoxide reductase (warfarin-sensitive) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=3 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin-K-epoxide reductase (warfarin-sensitive) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=3 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 (Fragment) OS=Mus musculus castaneus OX=10091 GN=Vkorc1 PE=4 SV=1; VKORC1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin-K-epoxide reductase (warfarin-sensitive) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=3 SV=1; Vitamin-K-epoxide reductase (warfarin-sensitive) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=3 SV=1; VKORC1 OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 OS=Mus musculus castaneus OX=10091 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 (Fragment) OS=Mus musculus castaneus OX=10091 GN=Vkorc1 PE=4 SV=1; VKORC1 OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 (Fragment) OS=Mus musculus castaneus OX=10091 GN=Vkorc1 PE=4 SV=1; VKORC1 OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 (Fragment) OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; Vitamin K 2,3-epoxide reductase complex subunit 1 OS=Mus musculus castaneus OX=10091 GN=Vkorc1 PE=4 SV=1; VKORC1 OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1; VKORC1 OS=Mus musculus domesticus OX=10092 GN=Vkorc1 PE=4 SV=1" 1 3 3 0.3265 0 1 1 1 384.87039 1152.59662 1152.5959 0.63 0.00024 0/0 0 0 2776026.5 HCD 30 MS2 33.95905 188.2 110 28.1285 5165 5165 5161 QEplus033719.raw F4 205.4 121.9 210.6 234.5 162.1 194.5 165 2.94 1 FALSE 0.001275 0.01743 0.305 -250 8025 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQNCMR [R].gQNcMR.[K] N-Term(TMT6plex); C4(Carbamidomethyl) 2 Q9D358 Low molecular weight phosphotyrosine protein phosphatase OS=Mus musculus OX=10090 GN=Acp1 PE=1 SV=3 A0A1W2P7X3; Q9D358 Acid phosphatase OS=Mus musculus OX=10090 GN=Acp1 PE=1 SV=1; Low molecular weight phosphotyrosine protein phosphatase OS=Mus musculus OX=10090 GN=Acp1 PE=1 SV=3 0 2 2 0.645 0 1 1 1 497.74158 994.47588 994.47599 -0.11 -0.00005 0/0 0 0 1796986.25 HCD 30 MS2 6.127222 199.6 110 28.136 5168 5168 5161 QEplus033719.raw F4 391.1 150 226.9 126 106.9 196.8 54 2 1 FALSE 0.003347 0.06484 0.101 -250 8036 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASDADRPCR [K].aSDADRPcR.[K] N-Term(TMT6plex); C8(Carbamidomethyl) 5 Q8C3P7 N6-adenosine-methyltransferase subunit METTL3 OS=Mus musculus OX=10090 GN=Mettl3 PE=1 SV=2 Q8C3P7; G3UXX7; G5E922; A0A0R4J041; Q3U6J4 N6-adenosine-methyltransferase subunit METTL3 OS=Mus musculus OX=10090 GN=Mettl3 PE=1 SV=2; N6-adenosine-methyltransferase subunit METTL3 (Fragment) OS=Mus musculus OX=10090 GN=Mettl3 PE=1 SV=8; N6-adenosine-methyltransferase subunit METTL3 (Fragment) OS=Mus musculus OX=10090 GN=Mettl3 PE=1 SV=1; N6-adenosine-methyltransferase subunit METTL3 OS=Mus musculus OX=10090 GN=Mettl3 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Mettl3 PE=2 SV=1 0 3 3 0.6455 0 1 1 1 426.21451 1276.62897 1276.62655 1.9 0.00081 0/0 0 0 1071424 HCD 30 MS2 60.14841 128.6 110 28.1435 5171 5171 5161 QEplus033719.raw F4 162.7 115.2 134.2 108.6 140.6 110.4 113 2.99 1 FALSE 1.14E-05 0.00026 0.777 -250 8041 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRESQIR [K].gRESQIR.[I] N-Term(TMT6plex) 2 Q7TQ48-1 Isoform 2 of Sarcalumenin OS=Mus musculus OX=10090 GN=Srl Q7TQ48; Q7TQ48-1 Sarcalumenin OS=Mus musculus OX=10090 GN=Srl PE=1 SV=2; Isoform 2 of Sarcalumenin OS=Mus musculus OX=10090 GN=Srl 1 3 3 0.3944 0 1 1 2 358.87906 1074.62262 1074.62172 0.84 0.0003 0/0 0 0 41249064 HCD 30 MS2 7.539838 284.2 29.797 28.1508 5173 5173 5172 QEplus033719.raw F4 436.3 41.3 226.7 595.7 48.6 356.7 295 3.22 1 FALSE 0.0002323 0.004729 0.508 -250 8054 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSSGCVER [R].gSSGcVER.[L] N-Term(TMT6plex); C5(Carbamidomethyl) 10 Q8BML9 Glutamine--tRNA ligase OS=Mus musculus OX=10090 GN=Qars1 PE=1 SV=1 A0A140LID3; Q8R1V9; A0A0A6YY08; A0A140LJH2; A0A140LII8; D3Z158; Q3TIN2; A0A140LIN2; A0A140LIR0; Q8BML9 Glutaminyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutaminyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Qars PE=1 SV=2; Glutaminyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutaminyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=1 SV=2; Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=2 SV=1; Glutaminyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutaminyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutamine--tRNA ligase OS=Mus musculus OX=10090 GN=Qars1 PE=1 SV=1 0 2 2 0.4325 0 1 1 1 540.76953 1080.53179 1080.53052 1.17 0.00063 0/0 0 0 7036901.5 HCD 30 MS2 19.38772 335.9 110 28.1556 5175 5175 5172 QEplus033719.raw F4 574.5 225 392.6 298.4 208.8 316.3 62 2.52 1 FALSE 0.000108 0.003088 0.555 -250 8062 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AADDAERER [R].aADDAERER.[R] N-Term(TMT6plex) 3 Q9DC28 Casein kinase I isoform delta OS=Mus musculus OX=10090 GN=Csnk1d PE=1 SV=2 Q9DC28-2; Q9DC28; Q3USK2 Isoform 2 of Casein kinase I isoform delta OS=Mus musculus OX=10090 GN=Csnk1d; Casein kinase I isoform delta OS=Mus musculus OX=10090 GN=Csnk1d PE=1 SV=2; Casein kinase I isoform delta OS=Mus musculus OX=10090 GN=Csnk1d PE=1 SV=1 1 3 3 0.5305 0 1 1 1 421.21677 1261.63575 1261.63341 1.85 0.00078 0/0 0 0 2935562.75 HCD 30 MS2 28.8151 186.8 110 28.158 5176 5176 5172 QEplus033719.raw F4 204.6 160.9 188.7 181.8 223.1 161.5 123 3.28 1 FALSE 1.14E-05 3.37E-05 0.947 -250 8068 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CATTAER [K].cATTAER.[W] N-Term(TMT6plex); C1(Carbamidomethyl) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1; Q8BUJ0 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1 0 2 2 0.5061 0 1 1 1 519.26636 1037.52544 1037.52471 0.7 0.00036 0/0 0 0 2036711.5 HCD 30 MS2 12.44844 147.8 110 28.163 5178 5178 5172 QEplus033719.raw F4 346.2 21.7 84.8 228.4 25.1 180.4 89 2.47 2 FALSE 0.0001707 0.003941 0.529 -250 8077 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQPSETER [K].sQPSETER.[L] N-Term(TMT6plex) 2 Q62470 Integrin alpha-3 OS=Mus musculus OX=10090 GN=Itga3 PE=1 SV=1 Q62470; Q62470-3 Integrin alpha-3 OS=Mus musculus OX=10090 GN=Itga3 PE=1 SV=1; Isoform 3 of Integrin alpha-3 OS=Mus musculus OX=10090 GN=Itga3 0 2 2 0.6096 0 1 1 1 581.79773 1162.58818 1162.59015 -1.69 -0.00098 0/0 0 0 1617137.875 HCD 30 MS2 0 151.2 110 28.1655 5179 5179 5172 QEplus033719.raw F4 133.5 188.7 166.2 83.8 232.1 103.1 106 2.92 1 FALSE 1.14E-05 8.13E-05 0.874 -250 8083 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQVSQER [R].sQVSQER.[Q] N-Term(TMT6plex) 3 B2RWR4 Cerebellar degeneration-related protein 2-like OS=Mus musculus OX=10090 GN=Cdr2l PE=2 SV=1 B2RWR4; B7ZMV4; A2A6T1 Cerebellar degeneration-related protein 2-like OS=Mus musculus OX=10090 GN=Cdr2l PE=2 SV=1; Cdr2l protein OS=Mus musculus OX=10090 GN=Cdr2l PE=2 SV=1; Cerebellar degeneration-related protein 2-like OS=Mus musculus OX=10090 GN=Cdr2l PE=1 SV=1 0 2 2 0.188 0 1 1 1 531.79138 1062.57549 1062.5741 1.3 0.00069 0/0 0 0 1469950.25 HCD 30 MS2 31.32824 183.3 110 28.168 5180 5180 5172 QEplus033719.raw F4 272.4 150.2 222.2 141 163.8 150 263 2.66 1 FALSE 7.59E-05 0.002776 0.566 -250 8112 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPDGQPATR [QR].rPDGQPATR.[E] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 3 3 0.6076 0 1 1 1 409.56439 1226.67862 1226.6803 -1.37 -0.00056 0/0 0 0 1621369.375 HCD 30 MS2 52.01757 167.3 110 28.1878 5187 5187 5183 QEplus033719.raw F4 436.5 77.3 138.1 113.2 92.2 146.6 276 3.67 2 FALSE 1.14E-05 4.01E-06 1.123 -250 8169 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRESLRR [K].dRESLRR.[T] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; A0A494B9I0 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Eukaryotic translation initiation factor 3 subunit A (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=1 2 3 3 0.1685 0 1 1 1 387.56125 1160.66919 1160.66973 -0.47 -0.00018 0/0 0 0 4129366.5 HCD 30 MS2 29.61692 199.4 110 28.2196 5199 5199 5194 QEplus033719.raw F4 257.8 128 192.3 159.6 260.7 198.1 350 2.67 1 FALSE 0.002793 0.05489 0.128 -250 8176 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQAEPSER [R].sQAEPSER.[R] N-Term(TMT6plex) 1 Q9Z315 U4/U6.U5 tri-snRNP-associated protein 1 OS=Mus musculus OX=10090 GN=Sart1 PE=1 SV=1 Q9Z315 U4/U6.U5 tri-snRNP-associated protein 1 OS=Mus musculus OX=10090 GN=Sart1 PE=1 SV=1 0 2 2 0.5391 0 1 1 1 566.79315 1132.57903 1132.57958 -0.49 -0.00028 0/0 0 0 2450247 HCD 30 MS2 20.13426 218.9 110 28.2221 5200 5200 5194 QEplus033719.raw F4 259.1 197.7 221.5 163 294.4 178 104 2.43 1 FALSE 5.44E-05 0.002138 0.592 -250 8183 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEYGSR [R].nEYGSR.[VI] N-Term(TMT6plex) 12 Q3U0V1; A0A0G2JFY5 Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2;Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1 Q3U0V1; A0A0G2JFY5; Q91WJ8-2; A0A0G2JGW9; A0A3B2WCD8; Q0P6B2; A0A0G2JG00; A0A0G2JFK2; Q3TUE1; Q91WJ8; Q3UUU2; Q3TIS5 Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Isoform 2 of Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=1; Far upstream element (FUSE) binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=2 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fubp1 PE=2 SV=1 0 2 2 0.3971 0 1 1 1 477.74597 954.48467 954.48423 0.46 0.00022 0/0 0 0 2138846.75 HCD 30 MS2 0 250.4 110 28.2246 5201 5201 5194 QEplus033719.raw F4 335 218.2 285.3 175 299.6 189.4 25 2.04 2 FALSE 0.004399 0.07942 0.063 -250 8193 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHEDVQER [R].eHEDVQER.[T] N-Term(TMT6plex) 3 G3UW40 Mutated in colorectal cancers OS=Mus musculus OX=10090 GN=Mcc PE=1 SV=1 G3UW40; E9PWI3; Q3TYX4 Mutated in colorectal cancers OS=Mus musculus OX=10090 GN=Mcc PE=1 SV=1; Mutated in colorectal cancers OS=Mus musculus OX=10090 GN=Mcc PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mcc PE=2 SV=1 0 3 3 0.6192 0 1 1 1 424.21201 1270.62146 1270.62251 -0.82 -0.00035 0/0 0 0 1885874.75 HCD 30 MS2 24.17483 83.5 110 28.2271 5202 5202 5194 QEplus033719.raw F4 112.6 75.1 90.9 61.3 93.2 68.1 101 3.44 1 FALSE 1.14E-05 0.0007388 0.689 -250 8204 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVSSER [R].nVSSER.[S] N-Term(TMT6plex) 21 P30999 Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2 D3Z2H7; P30999-2; E9Q906; Q3TPD1; E9Q905; D3Z2H2; P30999; E9Q8Z9; Q3UF77; G3X9V2; E9Q903; E9Q986; E9Q8Z8; E9Q901; E9Q8Z6; P30999-3; E9Q904; E9Q8Z5; E9Q8Z4; D3Z7H6; E9Q907 Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Isoform 2 of Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Isoform 3 of Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1 0 2 2 0.3589 0 1 1 1 460.75406 920.50084 920.49988 1.05 0.00048 0/0 0 0 1769962.625 HCD 30 MS2 0 230.6 110 28.2321 5204 5204 5194 QEplus033719.raw F4 562.4 144.8 234.8 103.3 120.4 217.9 69 2.09 1 FALSE 0.00293 0.05733 0.121 -250 8214 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPCDRPR [R].sPcDRPR.[V] N-Term(TMT6plex); C3(Carbamidomethyl) 3 C6EQH2 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 PE=2 SV=1 C6EQH2; Q4U2R1-2; Q4U2R1 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 PE=2 SV=1; Isoform 2 of E3 ubiquitin-protein ligase HERC2 OS=Mus musculus OX=10090 GN=Herc2; E3 ubiquitin-protein ligase HERC2 OS=Mus musculus OX=10090 GN=Herc2 PE=1 SV=3 0 3 3 0.3568 0 1 1 1 372.86533 1116.58142 1116.57814 2.94 0.00109 0/0 0 0 1070766.25 HCD 30 MS2 56.85661 79.8 110 28.2394 5206 5206 5205 QEplus033719.raw F4 107.2 53.9 84 71.4 89.4 72.8 125 2.27 1 FALSE 0.001607 0.02554 0.241 -250 8227 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEGESPQAR [R].gEGESPQAR.[A] N-Term(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 2 2 0.766 0 1 1 1 580.29907 1159.59087 1159.59048 0.33 0.00019 0/0 0 0 6149546 HCD 30 MS2 6.115707 344.4 110 28.247 5209 5209 5205 QEplus033719.raw F4 394.1 261.3 379.1 301.1 418.8 312.2 72 2.65 1 FALSE 1.14E-05 7.59E-06 1.07 -250 8231 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTLGHGDES [K].hTLGHGDES.[-] N-Term(TMT6plex) 1 P09528 Ferritin heavy chain OS=Mus musculus OX=10090 GN=Fth1 PE=1 SV=2 P09528 Ferritin heavy chain OS=Mus musculus OX=10090 GN=Fth1 PE=1 SV=2 0 3 3 0.7413 0 1 1 1 394.53006 1181.57563 1181.57483 0.67 0.00027 0/0 0 0 5651678 HCD 30 MS2 7.802753 162.5 110 28.2494 5210 5210 5205 QEplus033719.raw F4 240.5 100.9 155 160.4 183.6 134.8 95 3.44 1 FALSE 1.14E-05 0.000536 0.716 -250 8258 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGPEQGSSAR [R].aGPEQGSSAR.[A] N-Term(TMT6plex) 2 E9QP49; Q99MS7 EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1;EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1 E9QP49; Q99MS7 EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1; EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1 0 2 2 0.4195 0 1 1 1 594.81219 1188.61711 1188.61703 0.07 0.00004 0/0 0 0 2842483.25 HCD 30 MS2 10.20144 184.2 110 28.2595 5214 5214 5205 QEplus033719.raw F4 252.9 77.3 174 263.9 122.6 214.7 178 2.98 2 FALSE 1.14E-05 6.87E-07 1.268 -250 8267 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGGGYGGDR [R].sGGGYGGDR.[SG] N-Term(TMT6plex) 2 Q8BQ46 "TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1" Q8BQ46; Q3TLE4 "TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Taf15 PE=2 SV=1" 0 2 2 0.6474 0 1 1 1 527.76019 1054.51311 1054.5115 1.52 0.0008 0/0 0 0 2592989.25 HCD 30 MS2 18.92234 351.1 110 28.262 5215 5215 5205 QEplus033719.raw F4 450.6 323.9 417.5 272.5 381.7 260.1 66 3.29 1 FALSE 1.14E-05 1.19E-06 1.223 -250 8274 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QESNEYRR [K].qESNEYRR.[Q] N-Term(TMT6plex) 8 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 1 3 3 0.6045 0 1 1 1 437.56067 1310.66745 1310.66504 1.84 0.0008 0/0 0 0 35302272 HCD 30 MS2 38.35027 437.1 25.035 28.2693 5217 5217 5216 QEplus033719.raw F4 681.4 355.4 457.7 307 437.9 383.2 156 3.11 2 FALSE 4.43E-05 0.0017 0.614 -250 8291 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTVSSAR [K].nTVSSAR.[F] N-Term(TMT6plex) 4 Q9CPW4 Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=1 SV=3 Q3UA72; Q9CPW4; Q3UC32; Q3TKM9 Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=1 SV=1; Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=1 SV=3; Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=2 SV=1; Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=2 SV=1 0 2 2 0.2682 0 1 1 1 482.2749 963.54253 963.54207 0.47 0.00023 0/0 0 0 5571556.5 HCD 30 MS2 8.975946 400.9 110 28.2768 5220 5220 5216 QEplus033719.raw F4 901 259.2 404.1 210.4 238.1 392.6 184 2.61 1 FALSE 0.0001603 0.003722 0.535 -250 8303 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTLGHGDES [K].hTLGHGDES.[-] N-Term(TMT6plex) 1 P09528 Ferritin heavy chain OS=Mus musculus OX=10090 GN=Fth1 PE=1 SV=2 P09528 Ferritin heavy chain OS=Mus musculus OX=10090 GN=Fth1 PE=1 SV=2 0 2 2 0.8053 0 1 1 1 591.29095 1181.57463 1181.57483 -0.17 -0.0001 0/0 0 0 2858580 HCD 30 MS2 5.326931 98 110 28.2818 5222 5222 5216 QEplus033719.raw F4 136.5 59.5 108.8 106.9 101 75.4 97 2.26 1 FALSE 0.0001504 0.003401 0.545 -250 8307 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETSPEQR [R].eTSPEQR.[G] N-Term(TMT6plex) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 2 2 0.2939 0 1 1 1 538.2832 1075.55913 1075.55812 0.94 0.00051 0/0 0 0 2856080.5 HCD 30 MS2 47.39555 227.1 110 28.2843 5223 5223 5216 QEplus033719.raw F4 378.7 79.9 206.6 284.3 123.9 288.9 216 2.28 1 FALSE 0.006738 0.1069 -0.012 -250 8314 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSYSSR [K].dSYSSR.[ED] N-Term(TMT6plex) 5 Q9WV02; Q91VM5 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1;RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" A2AFI3; Q9WV02-2; Q9WV02; Q91VM5; S4R1F6 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; Isoform 2 of RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1" 0 2 2 0.3562 0 1 1 1 472.23703 943.46678 943.46824 -1.54 -0.00073 0/0 0 0 2773453.75 HCD 30 MS2 35.56022 361.3 110 28.2868 5224 5224 5216 QEplus033719.raw F4 529 335.1 426.9 233.9 347.8 295.4 14 2.33 2 FALSE 0.004881 0.08544 0.047 -250 8323 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPDGQPATR [QR].rPDGQPATR.[E] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.4801 0 1 1 1 613.8446 1226.68193 1226.6803 1.33 0.00082 0/0 0 0 2586797.25 HCD 30 MS2 0 62.9 110 28.2893 5225 5225 5216 QEplus033719.raw F4 78.7 48.9 66.7 70.5 57.1 55.4 218 2.77 2 FALSE 1.14E-05 0.0005269 0.718 -250 8332 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RIREESGAR [K].rIREESGAR.[I] N-Term(TMT6plex) 1 P60335 Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1 P60335 Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1 2 3 3 0.4822 0 1 1 1 434.91992 1302.74521 1302.74396 0.96 0.00042 0/0 0 0 2080330.75 HCD 30 MS2 39.2978 188.4 110 28.2918 5226 5226 5216 QEplus033719.raw F4 267.2 140.6 186.8 129 216.7 189.8 377 2.53 1 FALSE 0.004524 0.08068 0.06 -250 8337 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QESNEYRR [K].qESNEYRR.[Q] N-Term(TMT6plex) 8 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 1 2 2 0.4773 0 1 1 1 655.83734 1310.66741 1310.66504 1.8 0.00118 0/0 0 0 2549801.25 HCD 30 MS2 16.19227 102 110 28.2992 5228 5228 5227 QEplus033719.raw F4 105 94.1 113.8 86.3 136.5 76.3 156 2.64 2 FALSE 4.43E-05 0.001689 0.614 -250 8350 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAGPEGAHGRPR [R].eAGPEGAHGRPR.[Q] N-Term(TMT6plex) 7 Q3UXT5 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Txlna PE=2 SV=1 A2ADZ4; A2ADZ3; Q3UXT5; Q3UD58; A2ADZ2; A8Y5J8; Q6PAM1-2 Alpha-taxilin (Fragment) OS=Mus musculus OX=10090 GN=Txlna PE=1 SV=1; Alpha-taxilin (Fragment) OS=Mus musculus OX=10090 GN=Txlna PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Txlna PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Txlna PE=2 SV=1; Alpha-taxilin (Fragment) OS=Mus musculus OX=10090 GN=Txlna PE=1 SV=1; Alpha-taxilin (Fragment) OS=Mus musculus OX=10090 GN=Txlna PE=1 SV=1; Isoform 2 of Alpha-taxilin OS=Mus musculus OX=10090 GN=Txlna 0 4 4 0.5796 0 1 1 1 366.44858 1462.77248 1462.77124 0.85 0.00031 0/0 0 0 8921460 HCD 30 MS2 31.01159 161.4 110 28.3041 5230 5230 5227 QEplus033719.raw F4 185.3 120.9 177.3 144 181.6 159.5 271 4.02 1 FALSE 1.14E-05 1.91E-06 1.184 -250 8356 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTRPYR [K].qTRPYR.[L] N-Term(TMT6plex) 7 O88342 WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3 Q3TNK2; O88342; Q9DC08; Q3TE06; Q3U136; Q9DBM8; Q80ZI9 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat domain 1 (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1 0 3 3 0.524 0 1 1 1 350.54028 1049.6063 1049.60534 0.91 0.00032 0/0 0 0 7941299 HCD 30 MS2 6.733163 368.6 110 28.3066 5231 5231 5227 QEplus033719.raw F4 277.2 340.5 478.1 282.6 517.8 315.1 141 2.08 1 FALSE 0.001125 0.01495 0.333 -250 8362 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRNDAIR [R].sRNDAIR.[LVI] N-Term(TMT6plex) 4 Q5SX40 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1 Q9ESW6; Q5SX40; G3UW82; B2RWX0 "Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1" 1 3 3 0.4144 0 1 1 1 354.20746 1060.60782 1060.60607 1.65 0.00058 0/0 0 0 7362431.5 HCD 30 MS2 36.29637 457.9 110 28.3091 5232 5232 5227 QEplus033719.raw F4 754.5 105.3 532.4 783.2 199.3 372.6 294 3.33 1 FALSE 0.0008268 0.01152 0.381 -250 8363 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRNDALR [R].sRNDALR.[LVI] N-Term(TMT6plex) 5 Q5SX39; P13542 Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q5SX39; B1AR69; P13542; Q9JHR4 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2; Myosin heavy chain IIB (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1" 1 3 3 0.4144 0 1 2 2 354.20746 1060.60782 1060.60607 1.65 0.00058 0/0 0 0 7362431.5 HCD 30 MS2 36.29637 457.9 110 28.3091 5232 5232 5227 QEplus033719.raw F4 754.5 105.3 532.4 783.2 199.3 372.6 294 3.33 2 FALSE 0.0008268 0.01152 0.381 -250 8371 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAGPEGAHGRPR [R].eAGPEGAHGRPR.[Q] N-Term(TMT6plex) 7 Q3UXT5 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Txlna PE=2 SV=1 A2ADZ4; A2ADZ3; Q3UXT5; Q3UD58; A2ADZ2; A8Y5J8; Q6PAM1-2 Alpha-taxilin (Fragment) OS=Mus musculus OX=10090 GN=Txlna PE=1 SV=1; Alpha-taxilin (Fragment) OS=Mus musculus OX=10090 GN=Txlna PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Txlna PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Txlna PE=2 SV=1; Alpha-taxilin (Fragment) OS=Mus musculus OX=10090 GN=Txlna PE=1 SV=1; Alpha-taxilin (Fragment) OS=Mus musculus OX=10090 GN=Txlna PE=1 SV=1; Isoform 2 of Alpha-taxilin OS=Mus musculus OX=10090 GN=Txlna 0 3 3 0.7174 0 1 1 1 488.26208 1462.7717 1462.77124 0.32 0.00015 0/0 0 0 5286483.5 HCD 30 MS2 13.44217 261.5 110 28.3141 5234 5234 5227 QEplus033719.raw F4 289.3 216 274.6 171.6 352.4 265.2 274 4.6 1 FALSE 1.14E-05 2.00E-14 2.699 -250 8377 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVSSSNGGESSSR [K].tVSSSNGGESSSR.[S] N-Term(TMT6plex) 3 Q6P8I4 PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1 F8WI88; Q3TM89; Q6P8I4 PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1; PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1; PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1 0 2 2 0.772 0 1 1 1 742.36371 1483.72014 1483.71859 1.04 0.00077 0/0 0 0 5081412.5 HCD 30 MS2 0 162.8 110 28.3166 5235 5235 5227 QEplus033719.raw F4 227.5 152.9 163.8 126.1 174 132.8 87 4.43 1 FALSE 1.14E-05 1.16E-12 2.364 -250 8383 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPTHQGGPAQDR [K].qPTHQGGPAQDR.[G] N-Term(TMT6plex) 7 Q3TW36 Uncharacterized protein OS=Mus musculus OX=10090 GN=Skiv2l PE=2 SV=1 Q3TW36; O70349; Q8C2W7; Q6NZR5; Q3TE28; Q8CDP6; Q8R3X0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Skiv2l PE=2 SV=1; Uncharacterized protein SKI OS=Mus musculus OX=10090 GN=SKI PE=4 SV=1; Helicase C-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Skiv2l PE=2 SV=1; Superkiller viralicidic activity 2-like (S. cerevisiae) OS=Mus musculus OX=10090 GN=Skiv2l PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Skiv2l PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Skiv2l PE=2 SV=1; Skiv2l protein (Fragment) OS=Mus musculus OX=10090 GN=Skiv2l PE=2 SV=1 0 3 3 0.7205 0 1 1 1 507.59735 1520.7775 1520.77672 0.51 0.00026 0/0 0 0 4835200.5 HCD 30 MS2 34.73402 163.2 110 28.3191 5236 5236 5227 QEplus033719.raw F4 188.3 154.8 194.6 122.6 164.2 154.6 201 5.76 1 FALSE 1.14E-05 1.42E-12 2.348 -250 8395 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EASCSSNCAGCGR [K].eAScSSNcAGcGR.[D] N-Term(TMT6plex); C4(Carbamidomethyl); C8(Carbamidomethyl); C11(Carbamidomethyl) 15 E9Q9C7 Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1 E9Q9C7; E9QK41; Q8K4G5-5; Q8K4G5-2; Q9EPW6; Q8K4G5; Q3TAG5; B9EIV0; E9Q9C4; F6YHE5; E9Q9C1; E9Q9C0; Q8K4G5-4; Q3UP03; E9Q9C2 Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Isoform 5 of Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1; Isoform 2 of Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1; Actin-binding double zinc finger protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ablim1 PE=2 SV=1; Ablim1 protein OS=Mus musculus OX=10090 GN=Ablim1 PE=2 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Isoform 4 of Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ablim1 PE=2 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1 0 2 2 0.8479 0 1 1 1 822.84082 1644.67436 1644.67259 1.08 0.00089 0/0 0 0 6749588.5 HCD 30 MS2 1.948675 227.1 110 28.329 5239 5239 5238 QEplus033719.raw F4 217.4 142.8 276 269 105 352.6 3 4.01 1 FALSE 1.14E-05 1.25E-10 1.979 -250 8397 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TADEDRGPR [R].tADEDRGPR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.3669 0 1 1 1 415.88434 1245.63846 1245.63849 -0.03 -0.00001 0/0 0 0 1986799.625 HCD 30 MS2 33.61065 218.3 110 28.3314 5240 5240 5238 QEplus033719.raw F4 351.5 150.5 212.3 173.7 209 213 151 3.38 1 FALSE 1.14E-05 0.0009425 0.667 -250 8402 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLCRPCHNR [R].hLcRPcHNR.[E] N-Term(TMT6plex); C3(Carbamidomethyl); C6(Carbamidomethyl) 11 E9QP62 LIM and senescent cell antigen-like-containing domain protein OS=Mus musculus OX=10090 GN=Lims1 PE=1 SV=1 Q9D7B2; E9QP62; A8CVP1; A0A286YCF2; Q99JW4; Q91XD2; A0A5F8MPJ3; Q4ZJB3; A0A3Q4EC95; A8CVP4; A0A0R4J005 LIM and senescent cell antigen-like-containing domain protein OS=Mus musculus OX=10090 GN=Lims1 PE=1 SV=2; LIM and senescent cell antigen-like-containing domain protein OS=Mus musculus OX=10090 GN=Lims1 PE=1 SV=1; LIM and senescent cell antigen-like-containing domain protein OS=Mus musculus OX=10090 GN=Lims1 PE=2 SV=1; LIM and senescent cell antigen-like-containing domain protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Lims2 PE=1 SV=1; LIM and senescent cell antigen-like-containing domain protein 1 OS=Mus musculus OX=10090 GN=Lims1 PE=1 SV=3; LIM and senescent cell antigen-like-containing domain protein 2 OS=Mus musculus OX=10090 GN=Lims2 PE=1 SV=1; LIM and senescent cell antigen-like-containing domain protein OS=Mus musculus OX=10090 GN=Lims1 PE=1 SV=1; LIM and senescent cell antigen-like-containing domain protein OS=Mus musculus OX=10090 GN=Lims1 PE=2 SV=1; LIM and senescent cell antigen-like-containing domain protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Lims2 PE=1 SV=1; LIM and senescent cell antigen-like-containing domain protein OS=Mus musculus OX=10090 GN=Lims1 PE=2 SV=1; LIM and senescent cell antigen-like-containing domain protein OS=Mus musculus OX=10090 GN=Lims1 PE=1 SV=1 0 4 4 0.6111 0 1 1 1 370.44116 1478.74282 1478.74187 0.64 0.00024 0/0 0 0 8000412.5 HCD 30 MS2 40.12868 285.4 110 28.3362 5242 5242 5238 QEplus033719.raw F4 586.3 189.6 309.2 170.9 183.6 272.7 171 3.24 1 FALSE 1.14E-05 0.000784 0.684 -250 8408 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EASCSSNCAGCGR [K].eAScSSNcAGcGR.[D] N-Term(TMT6plex); C4(Carbamidomethyl); C8(Carbamidomethyl); C11(Carbamidomethyl) 15 E9Q9C7 Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1 E9Q9C7; E9QK41; Q8K4G5-5; Q8K4G5-2; Q9EPW6; Q8K4G5; Q3TAG5; B9EIV0; E9Q9C4; F6YHE5; E9Q9C1; E9Q9C0; Q8K4G5-4; Q3UP03; E9Q9C2 Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Isoform 5 of Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1; Isoform 2 of Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1; Actin-binding double zinc finger protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ablim1 PE=2 SV=1; Ablim1 protein OS=Mus musculus OX=10090 GN=Ablim1 PE=2 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Isoform 4 of Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ablim1 PE=2 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1 0 3 3 0.8766 0 1 1 1 548.8963 1644.67435 1644.67259 1.07 0.00059 0/0 0 0 6314159.5 HCD 30 MS2 7.048577 67 110 28.3387 5243 5243 5238 QEplus033719.raw F4 82.2 42 68.7 74.2 53.2 81.8 3 5.59 1 FALSE 1.14E-05 6.88E-07 1.268 -250 8410 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEPHPCHTCR [R].aEPHPcHTcR.[A] N-Term(TMT6plex); C6(Carbamidomethyl); C9(Carbamidomethyl) 1 Q91XD7 Protein disulfide isomerase Creld1 OS=Mus musculus OX=10090 GN=Creld1 PE=1 SV=1 Q91XD7 Protein disulfide isomerase Creld1 OS=Mus musculus OX=10090 GN=Creld1 PE=1 SV=1 0 4 4 0.7709 0 1 1 1 374.17926 1493.69521 1493.69392 0.87 0.00032 0/0 0 0 4298782.5 HCD 30 MS2 24.28575 231.4 110 28.3411 5244 5244 5238 QEplus033719.raw F4 323.2 126.4 224.6 261.4 172.1 280.4 53 4.19 1 FALSE 1.14E-05 0.0003181 0.761 -250 8418 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASAEEEPHRER [K].aSAEEEPHRER.[A] N-Term(TMT6plex) 6 S4R1P5 Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=1 A0A087WPR7; Q91ZU6-3; Q91ZU6-4; E9Q9X1; Q91ZU6; S4R1P5 Dystonin (Fragment) OS=Mus musculus OX=10090 GN=Dst PE=1 SV=1; Isoform 3 of Dystonin OS=Mus musculus OX=10090 GN=Dst; Isoform 4 of Dystonin OS=Mus musculus OX=10090 GN=Dst; Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=2; Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=2; Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=1 1 3 3 0.6427 0 1 1 1 513.92938 1539.77359 1539.7713 1.49 0.00076 0/0 0 0 3718480.75 HCD 30 MS2 13.42903 140.8 110 28.3436 5245 5245 5238 QEplus033719.raw F4 173.6 89.5 141.8 171.4 114.6 153.7 172 3.61 1 FALSE 1.14E-05 7.67E-08 1.449 -250 8424 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLCRPCHNR [R].hLcRPcHNR.[E] N-Term(TMT6plex); C3(Carbamidomethyl); C6(Carbamidomethyl) 11 E9QP62 LIM and senescent cell antigen-like-containing domain protein OS=Mus musculus OX=10090 GN=Lims1 PE=1 SV=1 Q9D7B2; E9QP62; A8CVP1; A0A286YCF2; Q99JW4; Q91XD2; A0A5F8MPJ3; Q4ZJB3; A0A3Q4EC95; A8CVP4; A0A0R4J005 LIM and senescent cell antigen-like-containing domain protein OS=Mus musculus OX=10090 GN=Lims1 PE=1 SV=2; LIM and senescent cell antigen-like-containing domain protein OS=Mus musculus OX=10090 GN=Lims1 PE=1 SV=1; LIM and senescent cell antigen-like-containing domain protein OS=Mus musculus OX=10090 GN=Lims1 PE=2 SV=1; LIM and senescent cell antigen-like-containing domain protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Lims2 PE=1 SV=1; LIM and senescent cell antigen-like-containing domain protein 1 OS=Mus musculus OX=10090 GN=Lims1 PE=1 SV=3; LIM and senescent cell antigen-like-containing domain protein 2 OS=Mus musculus OX=10090 GN=Lims2 PE=1 SV=1; LIM and senescent cell antigen-like-containing domain protein OS=Mus musculus OX=10090 GN=Lims1 PE=1 SV=1; LIM and senescent cell antigen-like-containing domain protein OS=Mus musculus OX=10090 GN=Lims1 PE=2 SV=1; LIM and senescent cell antigen-like-containing domain protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Lims2 PE=1 SV=1; LIM and senescent cell antigen-like-containing domain protein OS=Mus musculus OX=10090 GN=Lims1 PE=2 SV=1; LIM and senescent cell antigen-like-containing domain protein OS=Mus musculus OX=10090 GN=Lims1 PE=1 SV=1 0 3 3 0.632 0 1 1 1 493.58569 1478.74253 1478.74187 0.44 0.00022 0/0 0 0 3424937.25 HCD 30 MS2 9.187185 173.1 110 28.3461 5246 5246 5238 QEplus033719.raw F4 198.9 166.5 237.6 109.6 120.2 205.9 171 3.37 1 FALSE 0.0003496 0.006677 0.464 -250 8430 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSGDISEH [K].rSGDISEH.[-] N-Term(TMT6plex) 4 A0A0R4J1N9 "Transcription factor A, mitochondrial OS=Mus musculus OX=10090 GN=Tfam PE=1 SV=1" A0A0R4J1N9; P40630-2; P40630; Q3TSW9 "Transcription factor A, mitochondrial OS=Mus musculus OX=10090 GN=Tfam PE=1 SV=1; Isoform Nuclear of Transcription factor A, mitochondrial OS=Mus musculus OX=10090 GN=Tfam; Transcription factor A, mitochondrial OS=Mus musculus OX=10090 GN=Tfam PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tfam PE=2 SV=1" 1 3 3 0.4209 0 1 1 1 377.19846 1129.58081 1129.57992 0.79 0.0003 0/0 0 0 2567455 HCD 30 MS2 37.03954 163.7 110 28.3511 5248 5248 5238 QEplus033719.raw F4 222.2 99.8 149.2 154.7 158.6 197.6 99 2.78 1 FALSE 0.001318 0.01809 0.299 -250 8437 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPPEEQR [K].rPPEEQR.[L] N-Term(TMT6plex) 2 P62869 Elongin-B OS=Mus musculus OX=10090 GN=Elob PE=1 SV=1 P62869; A0A3B2WBM3 Elongin-B OS=Mus musculus OX=10090 GN=Elob PE=1 SV=1; Elongin-B OS=Mus musculus OX=10090 GN=Elob PE=1 SV=1 0 3 3 0.4147 0 1 1 1 380.88272 1140.63361 1140.63229 1.16 0.00044 0/0 0 0 11694129 HCD 30 MS2 10.34456 275.6 90.396 28.3584 5250 5250 5249 QEplus033719.raw F4 476.8 159.3 276.5 225.8 246.1 269.4 189 2.99 1 FALSE 0.0004091 0.007298 0.452 -250 8446 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEPHPCHTCR [R].aEPHPcHTcR.[A] N-Term(TMT6plex); C6(Carbamidomethyl); C9(Carbamidomethyl) 1 Q91XD7 Protein disulfide isomerase Creld1 OS=Mus musculus OX=10090 GN=Creld1 PE=1 SV=1 Q91XD7 Protein disulfide isomerase Creld1 OS=Mus musculus OX=10090 GN=Creld1 PE=1 SV=1 0 3 3 0.784 0 1 1 1 498.56982 1493.69492 1493.69392 0.67 0.00033 0/0 0 0 3369433.75 HCD 30 MS2 5.884542 112 110 28.3609 5251 5251 5249 QEplus033719.raw F4 124.5 62.8 124.7 156.9 58.3 144.6 53 4.63 1 FALSE 1.14E-05 8.04E-08 1.445 -250 8472 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQSNEHLR [K].qQSNEHLR.[R] N-Term(TMT6plex) 5 Q3ULT2 Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1 A0A1L1SVJ6; A0A1L1SV25; Q3UDJ7; Q3ULT2; Q1A602 Alpha-actinin-4 (Fragment) OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Alpha-actinin-4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1 0 3 3 0.2518 0 1 1 1 414.22543 1240.66175 1240.65956 1.76 0.00073 0/0 0 0 2720524.25 HCD 30 MS2 31.95967 146.4 110 28.3708 5255 5255 5249 QEplus033719.raw F4 239.3 97 130.9 128.6 181.5 101.1 198 4.09 1 FALSE 1.14E-05 0.0005753 0.71 -250 8500 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATDSDSEPNR [R].aTDSDSEPNR.[G] N-Term(TMT6plex) 4 Q9QXA3 Fat 1 cadherin (Fragment) OS=Mus musculus OX=10090 GN=Fat1 PE=1 SV=1 Q9QXA3; A0A1L1SQU7; A0A087WRT4; F2Z4A3 Fat 1 cadherin (Fragment) OS=Mus musculus OX=10090 GN=Fat1 PE=1 SV=1; FAT atypical cadherin 1 OS=Mus musculus OX=10090 GN=Fat1 PE=1 SV=1; FAT atypical cadherin 1 OS=Mus musculus OX=10090 GN=Fat1 PE=1 SV=2; FAT atypical cadherin 1 OS=Mus musculus OX=10090 GN=Fat1 PE=1 SV=1 0 2 2 0.6273 0 1 1 1 660.8161 1320.62493 1320.6229 1.53 0.00101 0/0 0 0 1306065.375 HCD 30 MS2 11.11102 121.5 110 28.3809 5259 5259 5249 QEplus033719.raw F4 129.5 88.2 118.6 123 164.7 105.3 50 2.71 1 FALSE 1.14E-05 2.78E-05 0.963 -250 8517 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQEEIRR [RK].rQEEIRR.[MLQ] N-Term(TMT6plex) 1 Q3U4G8 Coronin OS=Mus musculus OX=10090 GN=Coro2a PE=2 SV=1 2 3 3 0.0456 0 1 1 2 405.909 1215.71244 1215.71193 0.41 0.00017 0/0 0 0 28059350 HCD 30 MS2 29.10752 212.5 31.695 28.393 5263 5263 5260 QEplus033719.raw F4 229 179.4 223.5 175.9 313.8 153.7 368 3.29 5 FALSE 0.001335 0.0187 0.293 -250 8518 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQEELRR [RK].rQEELRR.[MLQ] N-Term(TMT6plex) 20 Q8VIJ6; Q3TMM5; Q3UM20; Q8R326; G3UWR2 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1;Paraspeckle component 1 OS=Mus musculus OX=10090 GN=Pspc1 PE=1 SV=1;GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1" Q810V5; Q8VIJ6; Q7TMH7; Q8R326-2; Q3TMM5; G3UYR9; Q3TEB0; Q8C585; Q3TTV7; E9Q2M5; Q3TFC2; Q3UM20; G3UZX7; Q8R326; Q3TUA5; G3UWR2; G3UYG6; Q3TF40; Q6Y7W8; Q99K48 "Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1; Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1; Isoform 2 of Paraspeckle component 1 OS=Mus musculus OX=10090 GN=Pspc1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; GRB10-interacting GYF protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; NOPS domain-containing protein OS=Mus musculus OX=10090 GN=Pspc1 PE=2 SV=1; GYF domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gigyf2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; GRB10-interacting GYF protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; GRB10-interacting GYF protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; Paraspeckle component 1 OS=Mus musculus OX=10090 GN=Pspc1 PE=1 SV=1; GYF domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gigyf2 PE=2 SV=1; GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=2; Non-POU domain-containing octamer-binding protein OS=Mus musculus OX=10090 GN=Nono PE=1 SV=3" 2 3 3 0.0456 0 1 2 3 405.909 1215.71244 1215.71193 0.41 0.00017 0/0 0 0 28059350 HCD 30 MS2 29.10752 212.5 31.695 28.393 5263 5263 5260 QEplus033719.raw F4 229 179.4 223.5 175.9 313.8 153.7 368 3.29 5 FALSE 0.001335 0.0187 0.293 -250 8527 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DADEPQR [K].dADEPQR.[L] N-Term(TMT6plex) 4 Q80UL3 Galactokinase 1 OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1 Q80UL3; Q9R0N0; Q9CXZ9; Q9CWW5 Galactokinase 1 OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1; Galactokinase OS=Mus musculus OX=10090 GN=Galk1 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1 0 2 2 0.4228 0 1 1 1 530.2677 1059.52812 1059.52682 1.23 0.00065 0/0 0 0 14753820 HCD 30 MS2 28.80007 515.5 79.944 28.3997 5266 5266 5260 QEplus033719.raw F4 680.2 393.2 567.4 483.7 481.9 486.3 53 2.72 1 FALSE 0.004089 0.07538 0.074 -250 8531 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATPGAQR [K].aTPGAQR.[Y] N-Term(TMT6plex) 3 O54734 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Mus musculus OX=10090 GN=Ddost PE=1 SV=2 O54734; Q3UG68; Q3UC51 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Mus musculus OX=10090 GN=Ddost PE=1 SV=2; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Mus musculus OX=10090 GN=Ddost PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Mus musculus OX=10090 GN=Ddost PE=2 SV=1 0 2 2 0.4844 0 1 1 1 465.27258 929.53789 929.5366 1.39 0.00065 0/0 0 0 4922648.5 HCD 30 MS2 4.381898 468.6 110 28.4022 5267 5267 5260 QEplus033719.raw F4 674.2 371.8 625.5 351.9 288.8 499.6 67 2.25 1 FALSE 0.004089 0.07537 0.074 -250 8538 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDDASASTSQSSR [K].eDDASASTSQSSR.[A] N-Term(TMT6plex) 8 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 0 2 2 0.7653 0 1 1 1 785.36383 1569.72038 1569.71899 0.89 0.0007 0/0 0 0 4292066 HCD 30 MS2 4.901891 233 110 28.4047 5268 5268 5260 QEplus033719.raw F4 240.4 188.5 248 167.6 318.9 234.6 37 3.75 1 FALSE 1.14E-05 9.87E-12 2.188 -250 8548 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSYSSSR [R].dSYSSSR.[KS] N-Term(TMT6plex) 6 Q9WV02; Q91VM5 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1;RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" Q9ESC8; A0A2I3BRL8; Q9WV02; B7ZNX0; Q91VM5; S4R1F6 "AF4/FMR2 family member 4 OS=Mus musculus OX=10090 GN=Aff4 PE=1 SV=1; Predicted gene 7324 OS=Mus musculus OX=10090 GN=Gm7324 PE=4 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; Aff4 protein OS=Mus musculus OX=10090 GN=Aff4 PE=2 SV=1; RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1" 0 2 2 0.6214 0 1 1 1 515.75458 1030.50188 1030.50027 1.56 0.0008 0/0 0 0 3251040.25 HCD 30 MS2 29.22103 436.7 110 28.4097 5270 5270 5260 QEplus033719.raw F4 636.9 400.3 495.7 286 485.3 315.9 38 2.8 2 FALSE 0.0002019 0.004117 0.524 -250 8555 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQQDQVDR [K].qQQDQVDR.[N] N-Term(TMT6plex) 6 Q3TMM5; Q3UM20 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1 Q3TMM5; Q3TTV7; Q3TFC2; Q3UM20; Q3TF40; Q99K48 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Non-POU domain-containing octamer-binding protein OS=Mus musculus OX=10090 GN=Nono PE=1 SV=3 0 2 2 0.5322 0 1 1 1 623.32361 1245.63994 1245.63849 1.16 0.00072 0/0 0 0 3127166.5 HCD 30 MS2 0 166 110 28.4171 5272 5272 5271 QEplus033719.raw F4 175 144.6 174.2 122.1 247.2 133.2 133 2.95 2 FALSE 1.14E-05 6.99E-05 0.887 -250 8569 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEGESPQAR [R].gEGESPQAR.[A] N-Term(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 3 3 0.703 0 1 1 1 387.20193 1159.59125 1159.59048 0.66 0.00026 0/0 0 0 9216298 HCD 30 MS2 40.99416 215 89.079 28.4218 5274 5274 5271 QEplus033719.raw F4 275.7 156.3 222.8 177.1 261.5 196.6 72 3.3 1 FALSE 1.14E-05 0.0006896 0.695 -250 8573 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREAEMR [K].qREAEMR.[N] N-Term(TMT6plex) 2 Q564F6 Programmed cell death 5 OS=Mus musculus OX=10090 GN=Pdcd5 PE=1 SV=1 D3Z7Q5; Q564F6 Programmed cell death protein 5 OS=Mus musculus OX=10090 GN=Pdcd5 PE=1 SV=1; Programmed cell death 5 OS=Mus musculus OX=10090 GN=Pdcd5 PE=1 SV=1 1 3 3 0.2138 0 1 1 1 383.53989 1148.60511 1148.60436 0.65 0.00025 0/0 0 0 7613543.5 HCD 30 MS2 3.456415 297.6 110 28.4243 5275 5275 5271 QEplus033719.raw F4 370.8 201 318.3 291.9 347.2 256.6 187 2.9 1 FALSE 0.0002909 0.006024 0.478 -250 8579 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDDASASTSQSSR [K].eDDASASTSQSSR.[A] N-Term(TMT6plex) 8 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 0 3 3 0.7578 0 1 1 1 523.91199 1569.72141 1569.71899 1.54 0.00081 0/0 0 0 6111910 HCD 30 MS2 12.31596 145.3 110 28.4268 5276 5276 5271 QEplus033719.raw F4 182.3 104.9 139.9 132.7 173.3 138.5 35 5.12 1 FALSE 1.14E-05 4.99E-10 1.864 -250 8585 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HPHTGDGKEER [K].hPHTGDGkEER.[D] N-Term(TMT6plex); K8(TMT6plex) 2 Q91XC8 Death-associated protein 1 OS=Mus musculus OX=10090 GN=Dap PE=1 SV=3 A0A087WR57; Q91XC8 Death-associated protein 1 OS=Mus musculus OX=10090 GN=Dap PE=1 SV=1; Death-associated protein 1 OS=Mus musculus OX=10090 GN=Dap PE=1 SV=3 1 3 3 0.6188 0 1 1 1 574.31006 1720.91562 1720.9131 1.46 0.00084 0/0 0 0 4966518.5 HCD 30 MS2 12.35847 319.7 110 28.4293 5277 5277 5271 QEplus033719.raw F4 445.6 296.7 244.1 259.8 492.6 179.5 345 4.25 1 FALSE 1.14E-05 4.13E-09 1.69 -250 8599 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SATSDSEATGR [K].sATSDSEATGR.[A] N-Term(TMT6plex) 1 Q99KS2 Neugrin OS=Mus musculus OX=10090 GN=Ngrn PE=2 SV=3 Q99KS2 Neugrin OS=Mus musculus OX=10090 GN=Ngrn PE=2 SV=3 0 2 2 0.7056 0 1 1 1 655.82458 1310.64189 1310.63855 2.55 0.00167 0/0 0 0 2179858.5 HCD 30 MS2 11.54641 142 110 28.4368 5280 5280 5271 QEplus033719.raw F4 164.4 104.9 147.2 137.6 152 145.9 98 3.6 1 FALSE 1.14E-05 4.26E-09 1.687 -250 8608 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSYSTR [K].nSYSTR.[S] N-Term(TMT6plex) 1 Q8K1N4 Spermatogenesis-associated serine-rich protein 2 OS=Mus musculus OX=10090 GN=Spats2 PE=1 SV=1 Q8K1N4 Spermatogenesis-associated serine-rich protein 2 OS=Mus musculus OX=10090 GN=Spats2 PE=1 SV=1 0 2 2 0.4286 0 1 1 1 478.755 956.50273 956.49988 2.99 0.00143 0/0 0 0 2032918.125 HCD 30 MS2 16.05026 179.1 110 28.4393 5281 5281 5271 QEplus033719.raw F4 250.9 126.2 219 146.4 165.5 166.6 40 2.59 1 FALSE 0.002049 0.03611 0.189 -250 8616 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QENGSPAGGDAR [R].qENGSPAGGDAR.[G] N-Term(TMT6plex) 5 Q8R1E1 Lpgat1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lpgat1 PE=2 SV=1 Q8R1E1; Q91YX5; E9QL80; Q6A0A4; Q3UZK0 Lpgat1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lpgat1 PE=2 SV=1; Acyl-CoA:lysophosphatidylglycerol acyltransferase 1 OS=Mus musculus OX=10090 GN=Lpgat1 PE=1 SV=1; Acyl-CoA:lysophosphatidylglycerol acyltransferase 1 OS=Mus musculus OX=10090 GN=Lpgat1 PE=1 SV=1; MKIAA0205 protein (Fragment) OS=Mus musculus OX=10090 GN=Lpgat1 PE=2 SV=1; PlsC domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Lpgat1 PE=2 SV=1 0 2 2 0.7204 0 1 1 1 694.34314 1387.679 1387.67634 1.92 0.00133 0/0 0 0 1205042 HCD 30 MS2 0 53.4 110 28.4467 5283 5283 5282 QEplus033719.raw F4 55.6 43.9 55.7 59.1 55 50.9 88 3.72 1 FALSE 1.14E-05 2.16E-08 1.554 -250 8621 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQSNEHLR [K].qQSNEHLR.[R] N-Term(TMT6plex) 5 Q3ULT2 Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1 A0A1L1SVJ6; A0A1L1SV25; Q3UDJ7; Q3ULT2; Q1A602 Alpha-actinin-4 (Fragment) OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Alpha-actinin-4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1 0 2 2 0.4698 0 1 1 1 620.83417 1240.66106 1240.65956 1.2 0.00075 0/0 0 0 1909451.25 HCD 30 MS2 0 132.7 110 28.4492 5284 5284 5282 QEplus033719.raw F4 172.6 101.5 134.9 136.3 175.1 75.5 190 2.98 1 FALSE 1.14E-05 3.69E-05 0.94 -250 8628 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HPHTGDGKEER [K].hPHTGDGkEER.[D] N-Term(TMT6plex); K8(TMT6plex) 2 Q91XC8 Death-associated protein 1 OS=Mus musculus OX=10090 GN=Dap PE=1 SV=3 A0A087WR57; Q91XC8 Death-associated protein 1 OS=Mus musculus OX=10090 GN=Dap PE=1 SV=1; Death-associated protein 1 OS=Mus musculus OX=10090 GN=Dap PE=1 SV=3 1 4 4 0.359 0 1 1 1 430.98419 1720.91494 1720.9131 1.07 0.00046 0/0 0 0 32483518 HCD 30 MS2 7.717579 490.7 50.503 28.4514 5285 5285 5282 QEplus033719.raw F4 744.6 442.3 380.7 341 736.1 299.8 340 3.76 1 FALSE 1.14E-05 4.39E-05 0.925 -250 8634 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGSCSTIR [K].rGScSTIR.[I] N-Term(TMT6plex); C4(Carbamidomethyl) 10 Q1PG84 PBK1 OS=Mus musculus domesticus OX=10092 GN=Rsl1d1 PE=2 SV=1 Q3TAJ5; Q1PG84; Q3TGI9; Q9CSF9; Q3TS64; Q3TLJ3; Q3TH37; Q3TN25; Q8BVY0; Q3UL54 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; PBK1 OS=Mus musculus domesticus OX=10092 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Ribosomal L1 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rsl1d1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1 1 3 3 0.4814 0 1 1 1 389.2153 1165.63135 1165.63091 0.38 0.00015 0/0 0 0 10532617 HCD 30 MS2 19.11038 275.3 100.923 28.4537 5286 5286 5282 QEplus033719.raw F4 383.6 164.3 347.2 262.7 242.8 250.9 217 3.49 1 FALSE 5.44E-05 0.00218 0.59 -250 8654 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRDPGAVR [R].sRDPGAVR.[N] N-Term(TMT6plex) 7 Q3UDI8 DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=2 SV=1 Q3UDI8; D3Z6N3; D3Z335; D3Z2K9; D3Z0J6; Q61881; Q3V122 DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=2 SV=1; DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=1 SV=1; DNA replication licensing factor MCM7 (Fragment) OS=Mus musculus OX=10090 GN=Mcm7 PE=1 SV=1; DNA replication licensing factor MCM7 (Fragment) OS=Mus musculus OX=10090 GN=Mcm7 PE=1 SV=1; DNA replication licensing factor MCM7 (Fragment) OS=Mus musculus OX=10090 GN=Mcm7 PE=1 SV=1; DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=1 SV=1; DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=2 SV=1 1 3 3 0.4529 0 1 1 1 362.879 1086.62244 1086.62172 0.66 0.00024 0/0 0 0 7364713 HCD 30 MS2 35.68064 348.8 110 28.4612 5289 5289 5282 QEplus033719.raw F4 427.9 331 316.5 222.1 557.1 238.5 215 2.76 1 FALSE 1.14E-05 5.04E-05 0.914 -250 8660 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLEGNHDQHGR [K].nLEGNHDQHGR.[N] N-Term(TMT6plex) 9 A2A9M4 Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=2 F6ZJ55; A2A9M4; A0A0U1RNY4; A2A9M5; A2AW79; Q8R1A4-2; A0A0U1RNK7; E9PX48; Q8R1A4 Dedicator of cytokinesis protein 7 (Fragment) OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=1; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=2; Dedicator of cytokinesis protein 7 (Fragment) OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=1; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=1; Dedicator of cytokinesis protein 7 (Fragment) OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=2; Isoform 2 of Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=1; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=2; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=3 0 3 3 0.6354 0 1 1 1 502.58539 1505.74161 1505.74067 0.63 0.00031 0/0 0 0 3883975.25 HCD 30 MS2 11.04364 177.7 110 28.4637 5290 5290 5282 QEplus033719.raw F4 199.2 159.3 179.6 144.5 223.6 160.1 130 6.39 1 FALSE 1.14E-05 1.85E-11 2.136 -250 8675 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGSGSGSGGYGGDR [R].gGSGSGSGGYGGDR.[S] N-Term(TMT6plex) 2 Q8BQ46 "TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1" Q8BQ46; F6QCI0 "TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1; TATA-box-binding protein-associated factor 15 (Fragment) OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1" 0 2 2 0.7928 0 1 1 1 700.32495 1399.64263 1399.63995 1.91 0.00134 0/0 0 0 1863577.875 HCD 30 MS2 0 145.8 110 28.4687 5292 5292 5282 QEplus033719.raw F4 156.1 160.3 136 109.6 208.2 104.8 28 4.15 1 FALSE 1.14E-05 8.30E-16 2.962 -250 8689 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEGCSTEEGSGGR [K].aEGcSTEEGSGGR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 2 A0A2R8VK76 Cleavage and polyadenylation-specificity factor subunit 1 OS=Mus musculus OX=10090 GN=Cpsf1 PE=1 SV=1 A0A2R8VK76; Q9EPU4 Cleavage and polyadenylation-specificity factor subunit 1 OS=Mus musculus OX=10090 GN=Cpsf1 PE=1 SV=1; Cleavage and polyadenylation specificity factor subunit 1 OS=Mus musculus OX=10090 GN=Cpsf1 PE=1 SV=1 0 2 2 0.9093 0 1 1 1 763.34131 1525.67534 1525.67502 0.21 0.00016 0/0 0 0 1136720.5 HCD 30 MS2 0 53.1 110 28.4786 5295 5295 5293 QEplus033719.raw F4 49.1 45.9 56.9 51.7 72.1 43 13 4.08 1 FALSE 1.14E-05 2.13E-13 2.504 -250 8692 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERETPPR [K].eRETPPR.[F] N-Term(TMT6plex) 3 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q810V5; Q8VIJ6; Q9Z1Q0 "Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1; Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; PTB-associated splicing factor (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1" 1 3 3 0.4219 0 1 1 1 371.87918 1113.62299 1113.62139 1.44 0.00053 0/0 0 0 69318616 HCD 30 MS2 5.585691 273.7 15.93 28.4808 5296 5296 5293 QEplus033719.raw F4 335.4 235.9 275.6 205.9 379.8 209.8 159 2.56 1 FALSE 0.002326 0.04619 0.154 -250 8698 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQGHTEPQP [K].rQGHTEPQP.[-] N-Term(TMT6plex) 5 E9PYH2 Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 PE=1 SV=1 Q91V12-3; E9PYH2; Q91V12-4; Q91V12; Q91V12-2 Isoform C of Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7; Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 PE=1 SV=1; Isoform D of Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7; Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 PE=1 SV=2; Isoform A of Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 1 3 3 0.5731 0 1 1 1 426.89728 1278.67728 1278.67521 1.62 0.00069 0/0 0 0 6350210.5 HCD 30 MS2 17.25698 195.1 110 28.4856 5298 5298 5293 QEplus033719.raw F4 398.6 125.6 158.9 117.2 224.3 145.9 278 2.6 1 FALSE 0.002148 0.04006 0.174 -250 8704 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERETPPR [K].eRETPPR.[F] N-Term(TMT6plex) 3 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q810V5; Q8VIJ6; Q9Z1Q0 "Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1; Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; PTB-associated splicing factor (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1" 1 2 2 0.5689 0 1 1 1 557.31482 1113.62236 1113.62139 0.88 0.00049 0/0 0 0 5493962.5 HCD 30 MS2 11.03974 149.7 110 28.4881 5299 5299 5293 QEplus033719.raw F4 176.3 125.3 155.9 127.1 191.9 121.6 159 2.25 1 FALSE 0.003912 0.07295 0.08 -250 8709 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGGYGGDR [GR].sGGYGGDR.[SG] N-Term(TMT6plex) 2 Q8BQ46 "TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1" Q8BQ46; F6QCI0 "TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1; TATA-box-binding protein-associated factor 15 (Fragment) OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1" 0 2 2 0.2353 0 1 1 1 499.25012 997.49297 997.49004 2.94 0.00146 0/0 0 0 5490176 HCD 30 MS2 29.61382 557.4 110 28.4906 5300 5300 5293 QEplus033719.raw F4 748.9 522.9 662.2 476.4 494.2 440 38 3.06 1 FALSE 0.0001707 0.003867 0.531 -250 8723 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTTASPR [K].tTTASPR.[T] N-Term(TMT6plex) 20 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 Q9QXZ0-3; B1ARU4; Q9CYG3; E9QA63; Q80TZ5; F6RL59; E9QNP1; Q4QQN2; F6RCJ3; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; F6YKN8; Q80ZZ3; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8 Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; MKIAA0465 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=2; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Macf1 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Macf1 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 2 2 0.4693 0 1 1 1 481.77783 962.54839 962.54683 1.62 0.00078 0/0 0 0 2423831.5 HCD 30 MS2 7.429371 265.1 110 28.4956 5302 5302 5293 QEplus033719.raw F4 496.3 101.9 304.3 239.6 135.8 312.7 127 2.28 3 FALSE 0.002064 0.03796 0.182 -250 8738 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SATSDSEATGR [K].sATSDSEATGR.[A] N-Term(TMT6plex) 1 Q99KS2 Neugrin OS=Mus musculus OX=10090 GN=Ngrn PE=2 SV=3 Q99KS2 Neugrin OS=Mus musculus OX=10090 GN=Ngrn PE=2 SV=3 0 2 2 0.6741 0 1 1 1 655.82159 1310.63591 1310.63855 -2.02 -0.00132 0/0 0 0 1253905.375 HCD 30 MS2 8.304731 91.7 110 28.5054 5305 5305 5304 QEplus033719.raw F4 94.2 68.6 99.6 89.6 108.6 89.7 82 3.59 1 FALSE 1.14E-05 4.60E-09 1.681 -250 8745 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGSCSTIR [K].rGScSTIR.[I] N-Term(TMT6plex); C4(Carbamidomethyl) 10 Q1PG84 PBK1 OS=Mus musculus domesticus OX=10092 GN=Rsl1d1 PE=2 SV=1 Q3TAJ5; Q1PG84; Q3TGI9; Q9CSF9; Q3TS64; Q3TLJ3; Q3TH37; Q3TN25; Q8BVY0; Q3UL54 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; PBK1 OS=Mus musculus domesticus OX=10092 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Ribosomal L1 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rsl1d1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1 1 2 2 0.3988 0 1 1 1 583.32001 1165.63274 1165.63091 1.57 0.00092 0/0 0 0 2762169.25 HCD 30 MS2 19.09778 115.8 110 28.508 5306 5306 5304 QEplus033719.raw F4 143.1 73.4 134.3 96.7 135.5 111.8 207 1.73 1 FALSE 0.002886 0.05709 0.122 -250 8749 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DPETSQR [K].dPETSQR.[L] N-Term(TMT6plex) 2 Q9CZN7 "Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" Q9CZN7-2; Q9CZN7 "Isoform 2 of Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2; Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" 0 2 2 0.388 0 1 1 1 531.27545 1061.54363 1061.54247 1.09 0.00058 0/0 0 0 42279820 HCD 30 MS2 15.51193 447.1 27.973 28.5102 5307 5307 5304 QEplus033719.raw F4 746 326.3 510.2 314.9 368 417.3 142 2.5 1 FALSE 0.0006294 0.009617 0.411 -250 8765 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAEELHQR [K].rAEELHQR.[D] N-Term(TMT6plex) 2 Q8VCN9 Tubulin-specific chaperone C OS=Mus musculus OX=10090 GN=Tbcc PE=1 SV=1 Q8VCN9; A0A0R4J0M1 Tubulin-specific chaperone C OS=Mus musculus OX=10090 GN=Tbcc PE=1 SV=1; Tubulin-folding cofactor C OS=Mus musculus OX=10090 GN=Tbcc PE=1 SV=1 1 3 3 0.5315 0 1 1 1 423.24072 1267.70761 1267.70685 0.6 0.00026 0/0 0 0 7534435 HCD 30 MS2 16.84598 186.4 110 28.515 5309 5309 5304 QEplus033719.raw F4 219.4 123.5 182.3 189.1 233.9 170.4 286 3.97 1 FALSE 1.14E-05 7.38E-05 0.882 -250 8768 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRNSVGPSR [R].dRNSVGPSR.[L] N-Term(TMT6plex) 1 Q9D832 DnaJ homolog subfamily B member 4 OS=Mus musculus OX=10090 GN=Dnajb4 PE=1 SV=1 Q9D832 DnaJ homolog subfamily B member 4 OS=Mus musculus OX=10090 GN=Dnajb4 PE=1 SV=1 1 3 3 0.4661 0 1 1 1 406.22525 1216.6612 1216.65956 1.34 0.00054 0/0 0 0 7165175 HCD 30 MS2 53.68031 301 86.857 28.5172 5310 5310 5304 QEplus033719.raw F4 335.2 237.7 311.9 270.9 378.6 271.8 258 3.84 1 FALSE 1.14E-05 5.96E-05 0.9 -250 8773 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CAVNQR [K].cAVNQR.[Q] N-Term(TMT6plex); C1(Carbamidomethyl) 2 B2RSV4 "Splicing factor 3b, subunit 3 OS=Mus musculus OX=10090 GN=Sf3b3 PE=2 SV=1" Q921M3-2; B2RSV4 "Isoform 2 of Splicing factor 3B subunit 3 OS=Mus musculus OX=10090 GN=Sf3b3; Splicing factor 3b, subunit 3 OS=Mus musculus OX=10090 GN=Sf3b3 PE=2 SV=1" 0 2 2 0.2827 0 1 1 1 488.76428 976.52129 976.51957 1.76 0.00086 0/0 0 0 5738346.5 HCD 30 MS2 28.57548 432.7 110 28.5197 5311 5311 5304 QEplus033719.raw F4 659.5 354.6 507.2 313.5 397 364.5 195 1.91 1 FALSE 0.003448 0.06639 0.097 -250 8778 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQEHEMER [K].qQEHEMER.[D] N-Term(TMT6plex) 2 Q3UKS6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Mrpl40 PE=1 SV=1 Q3UKS6; D3Z7C0 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Mrpl40 PE=1 SV=1; 39S ribosomal protein L40, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl40 PE=1 SV=1" 0 3 3 0.5613 0 1 1 1 439.21378 1315.62677 1315.62621 0.42 0.00019 0/0 0 0 4970450.5 HCD 30 MS2 28.99797 255.3 110 28.5222 5312 5312 5304 QEplus033719.raw F4 381.4 163.5 238.6 218 245.1 285.1 46 4.08 1 FALSE 1.14E-05 1.37E-05 1.022 -250 8783 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEANTEPR [K].qEANTEPR.[K] N-Term(TMT6plex) 2 Q8BMA6 Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=2 Q8BMA6; A2AAN2 Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=2; Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=1 0 2 2 0.391 0 1 1 1 587.30756 1173.60784 1173.60613 1.45 0.00085 0/0 0 0 3241766.5 HCD 30 MS2 28.99316 293.1 110 28.5247 5313 5313 5304 QEplus033719.raw F4 345.3 232.1 328.2 239.1 333 281.1 125 3.12 1 FALSE 5.44E-05 0.001772 0.61 -250 8798 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CQQEESQAAR [R].cQQEESQAAR.[IM] N-Term(TMT6plex); C1(Carbamidomethyl) 8 E9PZQ0 Ryanodine receptor 1 OS=Mus musculus OX=10090 GN=Ryr1 PE=1 SV=1 A2AGL3-2; A0A140LJF7; E9PZQ0; A0A1L1SQG7; E9PW34; A0A140LJK7; A2AGL3; K3W4M2 Isoform 2 of Ryanodine receptor 3 OS=Mus musculus OX=10090 GN=Ryr3; Ryanodine receptor 3 OS=Mus musculus OX=10090 GN=Ryr3 PE=1 SV=1; Ryanodine receptor 1 OS=Mus musculus OX=10090 GN=Ryr1 PE=1 SV=1; Ryanodine receptor 1 OS=Mus musculus OX=10090 GN=Ryr1 PE=1 SV=1; Ryanodine receptor 3 OS=Mus musculus OX=10090 GN=Ryr3 PE=1 SV=1; Ryanodine receptor 3 OS=Mus musculus OX=10090 GN=Ryr3 PE=1 SV=1; Ryanodine receptor 3 OS=Mus musculus OX=10090 GN=Ryr3 PE=1 SV=1; Ryanodine receptor 1 OS=Mus musculus OX=10090 GN=Ryr1 PE=1 SV=1 0 2 2 0.6892 0 1 1 1 718.34399 1435.68071 1435.67971 0.7 0.0005 0/0 0 0 3475018 HCD 30 MS2 0 144 110 28.5345 5316 5316 5315 QEplus033719.raw F4 193.2 15.4 92.6 340.5 22.1 200.5 81 3.7 1 FALSE 1.14E-05 3.70E-08 1.509 -250 8806 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQPSSGSSPCR [K].sQPSSGSSPcR.[G] N-Term(TMT6plex); C10(Carbamidomethyl) 1 Q80YS6 Actin filament-associated protein 1 OS=Mus musculus OX=10090 GN=Afap1 PE=1 SV=1 Q80YS6 Actin filament-associated protein 1 OS=Mus musculus OX=10090 GN=Afap1 PE=1 SV=1 0 2 2 0.7148 0 1 1 1 689.83386 1378.66045 1378.65824 1.6 0.0011 0/0 0 0 2475703 HCD 30 MS2 0 94.2 110 28.537 5317 5317 5315 QEplus033719.raw F4 89.3 90.6 93.7 53.3 171.6 66.5 64 3.05 1 FALSE 1.14E-05 2.70E-07 1.345 -250 8814 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAAAHPDSEEQQQR [K].gAAAHPDSEEQQQR.[L] N-Term(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 3 3 0.7941 0 1 1 1 584.95428 1752.8483 1752.84625 1.17 0.00068 0/0 0 0 5056991 HCD 30 MS2 0 91.1 110 28.5443 5320 5320 5315 QEplus033719.raw F4 99.8 97.3 89.3 65.3 129.4 65.3 154 4.76 1 FALSE 1.14E-05 4.51E-13 2.443 -250 8818 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNVAENQSR [R].nNVAENQSR.[V] N-Term(TMT6plex) 2 P30416 Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=5 Q8CBS1; P30416 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Fkbp4 PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=5 0 2 2 0.7177 0 1 1 1 630.82898 1260.65068 1260.64939 1.02 0.00064 0/0 0 0 4732165.5 HCD 30 MS2 0 333.6 110 28.5468 5321 5321 5315 QEplus033719.raw F4 405 276.3 319.5 237.6 504.7 258.2 161 2.94 1 FALSE 1.14E-05 2.33E-05 0.978 -250 8822 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEAYHSR [R].eEAYHSR.[S] N-Term(TMT6plex) 1 Q00PI9 Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Mus musculus OX=10090 GN=Hnrnpul2 PE=1 SV=2 Q00PI9 Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Mus musculus OX=10090 GN=Hnrnpul2 PE=1 SV=2 0 3 3 0.4211 0 1 1 1 374.19162 1120.56031 1120.55845 1.65 0.00062 0/0 0 0 3899841 HCD 30 MS2 50.94188 282.1 110 28.5493 5322 5322 5315 QEplus033719.raw F4 462.5 163.4 295.2 245.3 240.9 285.1 93 3.42 1 FALSE 0.0002419 0.005028 0.501 -250 8834 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TETESHSNMR [K].tETESHSNMR.[C] N-Term(TMT6plex) 3 Q9R0L6 Pericentriolar material 1 protein OS=Mus musculus OX=10090 GN=Pcm1 PE=1 SV=2 Q9R0L6; B2RSW8; Q9R0L6-2 Pericentriolar material 1 protein OS=Mus musculus OX=10090 GN=Pcm1 PE=1 SV=2; Pericentriolar material 1 OS=Mus musculus OX=10090 GN=Pcm1 PE=2 SV=1; Isoform 2 of Pericentriolar material 1 protein OS=Mus musculus OX=10090 GN=Pcm1 0 3 3 0.7309 0 1 1 1 474.22803 1420.66953 1420.66881 0.51 0.00024 0/0 0 0 3101067.75 HCD 30 MS2 21.74086 219.2 110 28.5543 5324 5324 5315 QEplus033719.raw F4 474.3 102.8 174.5 152.7 223.6 187.3 51 4.72 1 FALSE 1.14E-05 1.93E-06 1.183 -250 8840 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QARPSDASAAR [R].qARPSDASAAR.[G] N-Term(TMT6plex) 6 O88286 Protein Wiz OS=Mus musculus OX=10090 GN=Wiz PE=1 SV=2 O88286-2; O88286; A0A494BAG6; O88286-3; F6ZBR8; G5E8J8 Isoform S of Protein Wiz OS=Mus musculus OX=10090 GN=Wiz; Protein Wiz OS=Mus musculus OX=10090 GN=Wiz PE=1 SV=2; Protein Wiz OS=Mus musculus OX=10090 GN=Wiz PE=1 SV=1; Isoform 2 of Protein Wiz OS=Mus musculus OX=10090 GN=Wiz; Protein Wiz OS=Mus musculus OX=10090 GN=Wiz PE=1 SV=3; Protein Wiz OS=Mus musculus OX=10090 GN=Wiz PE=1 SV=1 0 3 3 0.487 0 1 1 1 453.5831 1358.73474 1358.73379 0.7 0.00032 0/0 0 0 2977459.5 HCD 30 MS2 35.30275 127.4 110 28.5568 5325 5325 5315 QEplus033719.raw F4 163.3 104.2 135 83.8 172.2 105.9 314 3.08 1 FALSE 1.14E-05 0.0001227 0.84 -250 8847 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AESTANAGQSDNR [R].aESTANAGQSDNR.[S] N-Term(TMT6plex) 7 E9Q804 Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=3 E9Q804; Q99NH0-2; A0A0G2JDZ9; A0A1W2P6X1; Q99NH0; Q99NH0-3; E9QKG6 Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=3; Isoform 2 of Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17; Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=1; Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=1; Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=2; Isoform 3 of Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17; Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=1 0 2 2 0.8528 0 1 1 1 775.37439 1549.7415 1549.74039 0.72 0.00056 0/0 0 0 2415979 HCD 30 MS2 0 99.7 110 28.5641 5327 5327 5326 QEplus033719.raw F4 98.7 74.3 108.6 73.9 147.4 95.1 74 4.89 1 FALSE 1.14E-05 3.60E-12 2.271 -250 8858 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQENMQR [R].qQENMQR.[Q] N-Term(TMT6plex) 5 Q3THW7 Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1 Q3THW7; Q8BTX5; Q5M9L0; Q3TII2; Q3TIK5 Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1 0 2 2 0.413 0 1 1 1 581.79602 1162.58476 1162.58362 0.98 0.00057 0/0 0 0 18886590 HCD 30 MS2 9.485998 555.1 70.656 28.5689 5329 5329 5326 QEplus033719.raw F4 684.9 396 600 465.2 673.6 511 99 2.47 1 FALSE 0.0007626 0.01071 0.393 -250 8863 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEPADRPGR [R].sEPADRPGR.[V] N-Term(TMT6plex) 3 B2RWW1 Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=2 SV=1 B2RWW1; A0A1D5RLY6; Q8C052 Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=2 SV=1; Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=1 SV=1; Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=1 SV=2 0 3 3 0.4985 0 1 1 1 405.22107 1213.64865 1213.64866 -0.01 0 0/0 0 0 8854901 HCD 30 MS2 39.02384 402.8 101.101 28.5712 5330 5330 5326 QEplus033719.raw F4 429 295.9 438.4 404.1 399.2 449.9 172 3.23 1 FALSE 1.14E-05 7.77E-05 0.878 -250 8879 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGTEHGPGPR [R].dGTEHGPGPR.[A] N-Term(TMT6plex) 1 Q8K3A9 7SK snRNA methylphosphate capping enzyme OS=Mus musculus OX=10090 GN=Mepce PE=1 SV=2 Q8K3A9 7SK snRNA methylphosphate capping enzyme OS=Mus musculus OX=10090 GN=Mepce PE=1 SV=2 0 3 3 0.7326 0 1 1 1 417.88074 1251.62766 1251.62793 -0.22 -0.00009 0/0 0 0 2902584.5 HCD 30 MS2 13.2114 188.6 110 28.5787 5333 5333 5326 QEplus033719.raw F4 245.5 101.8 241.1 160.7 215.1 167.4 138 4.75 1 FALSE 1.14E-05 3.72E-08 1.509 -250 8888 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQGHTEPQP [K].rQGHTEPQP.[-] N-Term(TMT6plex) 5 E9PYH2 Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 PE=1 SV=1 Q91V12-3; E9PYH2; Q91V12-4; Q91V12; Q91V12-2 Isoform C of Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7; Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 PE=1 SV=1; Isoform D of Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7; Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 PE=1 SV=2; Isoform A of Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 1 2 2 0.5698 0 1 1 1 639.84222 1278.67717 1278.67521 1.53 0.00098 0/0 0 0 2871866.75 HCD 30 MS2 0 59 110 28.5812 5334 5334 5326 QEplus033719.raw F4 57.3 51.2 57.2 51 90.8 46.7 275 1.72 1 FALSE 0.002249 0.04402 0.161 -250 8894 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGSAAATSNPHHDNVR [R].gGSAAATSNPHHDNVR.[Y] N-Term(TMT6plex) 7 Q6PCP5 Mitochondrial fission factor OS=Mus musculus OX=10090 GN=Mff PE=1 SV=1 Q6PCP5; F7CTF8; A0A1S6GWF9; Q6PCP5-2; Q6PCP5-3; A0A1S6GWG0; E0CYB9 Mitochondrial fission factor OS=Mus musculus OX=10090 GN=Mff PE=1 SV=1; Mitochondrial fission factor (Fragment) OS=Mus musculus OX=10090 GN=Mff PE=1 SV=1; Mitochondrial fission factor OS=Mus musculus OX=10090 GN=Mff PE=2 SV=1; Isoform 2 of Mitochondrial fission factor OS=Mus musculus OX=10090 GN=Mff; Isoform 3 of Mitochondrial fission factor OS=Mus musculus OX=10090 GN=Mff; Mitochondrial fission factor OS=Mus musculus OX=10090 GN=Mff PE=2 SV=1; Mitochondrial fission factor OS=Mus musculus OX=10090 GN=Mff PE=1 SV=1 0 4 4 0.7898 0 1 1 1 455.73053 1819.90029 1819.89969 0.33 0.00015 0/0 0 0 2732907.25 HCD 30 MS2 7.977436 86.5 110 28.5837 5335 5335 5326 QEplus033719.raw F4 128.9 59.2 80.3 89.9 94.5 66.4 171 5.28 1 FALSE 1.14E-05 4.70E-11 2.059 -250 8907 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQEDTPNQR [R].dQEDTPNQR.[Y] N-Term(TMT6plex) 3 A0A286YDD7 Terminal uridylyltransferase 7 (Fragment) OS=Mus musculus OX=10090 GN=Tut7 PE=1 SV=1 A0A286YDD7; Q5BLK4; E9PUA2 Terminal uridylyltransferase 7 (Fragment) OS=Mus musculus OX=10090 GN=Tut7 PE=1 SV=1; Terminal uridylyltransferase 7 OS=Mus musculus OX=10090 GN=Tut7 PE=1 SV=3; Terminal uridylyltransferase 7 OS=Mus musculus OX=10090 GN=Tut7 PE=1 SV=1 0 2 2 0.7808 0 1 1 1 666.32434 1331.64141 1331.63889 1.89 0.00126 0/0 0 0 1384647.625 HCD 30 MS2 6.683302 84.8 110 28.5935 5338 5338 5337 QEplus033719.raw F4 83.6 76.7 91.2 69.8 97.7 89.7 52 2.92 1 FALSE 1.14E-05 7.31E-05 0.883 -250 8912 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELREHQER [R].eLREHQER.[H] N-Term(TMT6plex) 5 Q7M739 Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1 Q8K2T9; Q7M739; F6ZDS4; F6RX08; Q3UVR0 Tpr protein OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1 1 3 3 0.3993 0 1 1 1 442.5755 1325.71195 1325.71233 -0.29 -0.00013 0/0 0 0 2446639.5 HCD 30 MS2 48.58812 282.9 110 28.596 5339 5339 5337 QEplus033719.raw F4 433.7 201.8 312 201.4 296.4 251.8 261 2.98 1 FALSE 1.14E-05 0.000581 0.709 -250 8930 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAEATAASTSR [R].rAEATAASTSR.[S] N-Term(TMT6plex) 1 Q9ERB0 Synaptosomal-associated protein 29 OS=Mus musculus OX=10090 GN=Snap29 PE=1 SV=1 Q9ERB0 Synaptosomal-associated protein 29 OS=Mus musculus OX=10090 GN=Snap29 PE=1 SV=1 1 3 3 0.7138 0 1 1 1 450.58282 1349.73392 1349.73346 0.34 0.00015 0/0 0 0 6812577 HCD 30 MS2 20.71474 190.6 110 28.6008 5341 5341 5337 QEplus033719.raw F4 293.6 131.6 193.2 146.4 190.9 188 415 5.66 1 FALSE 1.14E-05 1.25E-11 2.168 -250 8935 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HRPLDER [K].hRPLDER.[A] N-Term(TMT6plex) 1 Q8VDD8 WASH complex subunit 1 OS=Mus musculus OX=10090 GN=Washc1 PE=1 SV=1 Q8VDD8 WASH complex subunit 1 OS=Mus musculus OX=10090 GN=Washc1 PE=1 SV=1 0 3 3 0.5347 0 1 1 1 384.55417 1151.64795 1151.64827 -0.28 -0.00011 0/0 0 0 6103042 HCD 30 MS2 66.33148 472.9 110 28.6033 5342 5342 5337 QEplus033719.raw F4 828.7 295.2 442.1 401.1 397 473 261 2.45 1 FALSE 0.001514 0.02278 0.259 -250 8944 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQGGQASEEGADR [K].aQGGQASEEGADR.[N] N-Term(TMT6plex) 1 Q08288 Cell growth-regulating nucleolar protein OS=Mus musculus OX=10090 GN=Lyar PE=1 SV=2 Q08288 Cell growth-regulating nucleolar protein OS=Mus musculus OX=10090 GN=Lyar PE=1 SV=2 0 2 2 0.6526 0 1 1 1 752.86377 1504.72026 1504.71893 0.89 0.00067 0/0 0 0 4404946 HCD 30 MS2 4.365907 104.2 110 28.6083 5344 5344 5337 QEplus033719.raw F4 107.3 100.3 88.2 66.5 173.9 89.2 68 4.49 1 FALSE 1.14E-05 3.34E-13 2.467 -250 8946 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREAEEGVRR [R].qREAEEGVRR.[K] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 2 4 4 0.44 0 1 1 1 365.45471 1458.79702 1458.79745 -0.3 -0.00011 0/0 0 0 3097957 HCD 30 MS2 31.2678 233 110 28.6108 5345 5345 5337 QEplus033719.raw F4 350.6 172.1 220.3 184.2 265.1 205.5 351 4 2 FALSE 1.14E-05 2.44E-06 1.164 -250 8980 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEAGPQGAR [K].gEAGPQGAR.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 2 2 0.3333 0 1 1 1 536.29126 1071.57524 1071.57444 0.75 0.0004 0/0 0 0 68771704 HCD 30 MS2 2.734462 561.5 20.713 28.6279 5351 5351 5348 QEplus033719.raw F4 670.6 470.5 653 523.5 634.7 417 126 2.7 1 FALSE 1.14E-05 0.0002108 0.795 -250 8985 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEERDPPR [R].tEERDPPR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; A0A494B9I0 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Eukaryotic translation initiation factor 3 subunit A (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=1 1 3 3 0.2927 0 1 1 1 410.22104 1228.64856 1228.64833 0.19 0.00008 0/0 0 0 37198192 HCD 30 MS2 33.31082 339.2 26.762 28.6301 5352 5352 5348 QEplus033719.raw F4 419.4 223.9 337.6 329.1 367.3 358.1 164 3.28 1 FALSE 0.0001603 0.003648 0.537 -250 9000 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPDDPSR [K].sPDDPSR.[Y] N-Term(TMT6plex) 2 Q5FW97 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1 Q5FW97; Q6PHC1 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 0 2 2 1 0 1 1 1 501.75684 1002.5064 1002.50535 1.04 0.00052 0/0 0 0 12778539 HCD 30 MS2 4.63062 735.6 110 28.6373 5355 5355 5348 QEplus033719.raw F4 1181.8 549.8 831.5 523.2 658 669.5 42 2.33 1 FALSE 0.0008445 0.01182 0.376 -250 9030 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPTGDRGPR [K].gPTGDRGPR.[G] N-Term(TMT6plex) 3 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 E0CXI2; Q01149; Q3TU64 Collagen alpha-2(I) chain (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 1 3 3 0.4583 0 1 1 1 381.21429 1141.62833 1141.62754 0.7 0.00026 0/0 0 0 120294200 HCD 30 MS2 18.3431 353.7 9.143 28.6568 5362 5362 5359 QEplus033719.raw F4 426.3 230.1 336 328.3 505.7 295.9 147 2.64 1 FALSE 0.001108 0.01448 0.339 -250 9037 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEQEAARR [K].eAEQEAARR.[A] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.5448 0 1 1 1 430.23187 1288.68106 1288.68069 0.29 0.00012 0/0 0 0 17960204 HCD 30 MS2 25.78714 443.6 65.122 28.6591 5363 5363 5359 QEplus033719.raw F4 601.8 306.3 434.1 452.6 486.7 380.2 244 4.46 2 FALSE 1.14E-05 1.27E-07 1.407 -250 9047 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREAEEGVRR [R].qREAEEGVRR.[K] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 2 3 3 0.4317 0 1 1 1 486.93716 1458.79694 1458.79745 -0.35 -0.00017 0/0 0 0 3547586 HCD 30 MS2 14.41575 147.2 110 28.6641 5365 5365 5359 QEplus033719.raw F4 182.5 115.1 141.6 123.3 175 145.9 354 4.1 2 FALSE 1.14E-05 6.93E-06 1.078 -250 9064 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAAAHPDSEEQQQR [K].gAAAHPDSEEQQQR.[L] N-Term(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.8213 0 1 1 1 876.92767 1752.84807 1752.84625 1.04 0.00091 0/0 0 0 2979143.75 HCD 30 MS2 0 81.6 110 28.6691 5367 5367 5359 QEplus033719.raw F4 90.8 86.5 78.8 58.4 118.6 56.6 157 4.7 1 FALSE 1.14E-05 5.57E-15 2.805 -250 9069 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEERDPPR [R].tEERDPPR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; A0A494B9I0 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Eukaryotic translation initiation factor 3 subunit A (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=1 1 2 2 0.5395 0 1 1 1 614.82758 1228.64787 1228.64833 -0.37 -0.00023 0/0 0 0 2878209.75 HCD 30 MS2 23.20614 56.8 110 28.6716 5368 5368 5359 QEplus033719.raw F4 61.1 45.2 59.4 55.1 61.1 59 155 2.15 1 FALSE 0.0003496 0.006687 0.464 -250 9080 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRNEAIR [R].sRNEAIR.[VL] N-Term(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 3 3 0.3868 0 1 1 1 358.87903 1074.62253 1074.62172 0.75 0.00027 0/0 0 0 94907920 HCD 30 MS2 4.673872 244.6 10.407 28.6814 5371 5371 5370 QEplus033719.raw F4 408.8 25 173.7 538.7 50.6 270.8 297 2.87 1 FALSE 0.0008805 0.0122 0.37 -250 9081 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRNEALR [R].sRNEALR.[VL] N-Term(TMT6plex) 4 B2RY26 Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1 Q2TAW4; B2RQQ1; B2RY26; B2RXX9 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1" 1 3 3 0.3868 0 1 2 2 358.87903 1074.62253 1074.62172 0.75 0.00027 0/0 0 0 94907920 HCD 30 MS2 4.673872 244.6 10.407 28.6814 5371 5371 5370 QEplus033719.raw F4 408.8 25 173.7 538.7 50.6 270.8 297 2.87 1 FALSE 0.0008805 0.0122 0.37 -250 9095 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTVEEHR [R].dTVEEHR.[Q] N-Term(TMT6plex) 4 Q4FJZ4 T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1 Q4FJZ4; Q3UDG2; Q3U6U7; P32921 "T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; Tryptophan--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Wars1 PE=1 SV=2" 0 3 3 0.4487 0 1 1 1 372.19479 1114.56983 1114.56902 0.73 0.00027 0/0 0 0 27492664 HCD 30 MS2 53.23209 191.6 26.085 28.6862 5373 5373 5370 QEplus033719.raw F4 219.1 164.1 184 166.6 264.1 151.7 93 3.12 1 FALSE 0.0003211 0.006181 0.475 -250 9110 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTVEEHR [R].dTVEEHR.[Q] N-Term(TMT6plex) 4 Q4FJZ4 T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1 Q4FJZ4; Q3UDG2; Q3U6U7; P32921 "T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; Tryptophan--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Wars1 PE=1 SV=2" 0 2 2 0.3148 0 1 1 1 557.78851 1114.56975 1114.56902 0.66 0.00037 0/0 0 0 4343352 HCD 30 MS2 33.1858 220.8 110 28.6912 5375 5375 5370 QEplus033719.raw F4 277.5 162 241.4 222.1 224.5 197.4 93 2.7 1 FALSE 0.0006869 0.01005 0.404 -250 9125 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEQEAARR [K].eAEQEAARR.[A] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.5156 0 1 1 1 644.8443 1288.68132 1288.68069 0.49 0.00031 0/0 0 0 3615764 HCD 30 MS2 0 141.5 110 28.6962 5377 5377 5370 QEplus033719.raw F4 193.5 105.6 127.9 135.3 156.3 130.1 247 3.2 2 FALSE 1.14E-05 2.73E-06 1.155 -250 9132 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDSTYR [R].gDSTYR.[C] N-Term(TMT6plex) 7 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; A0A668KLG7; B7FAV1; F6XC15; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.4121 0 1 1 1 464.24033 927.47338 927.47333 0.05 0.00002 0/0 0 0 2776786.25 HCD 30 MS2 33.84826 350.3 110 28.6987 5378 5378 5370 QEplus033719.raw F4 569.1 301.7 422.6 214.9 311 282.4 23 1.99 1 FALSE 0.003809 0.0721 0.082 -250 9138 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYGGSQGGGR [R].gYGGSQGGGR.[G] N-Term(TMT6plex) 4 Q8BQ46 "TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1" Q3V452; Q8BQ46; Q3V2Z2; Q3TLE4 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Taf15 PE=2 SV=1; TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Taf15 PE=2 SV=1" 0 2 2 0.5146 0 1 1 1 562.78674 1124.56621 1124.5646 1.43 0.0008 0/0 0 0 2731658.75 HCD 30 MS2 0 167 110 28.7012 5379 5379 5370 QEplus033719.raw F4 196.7 137.5 146.1 129.4 251.7 140.8 101 3.09 1 FALSE 1.14E-05 2.89E-08 1.53 -250 9162 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGSYGSGR [R].dGSYGSGR.[S] N-Term(TMT6plex) 3 Q542V3 Serine/arginine-rich-splicing factor 4 OS=Mus musculus OX=10090 GN=Srsf4 PE=1 SV=1 Q542V3; Q8VE97; Q8K3A8 Serine/arginine-rich-splicing factor 4 OS=Mus musculus OX=10090 GN=Srsf4 PE=1 SV=1; Serine/arginine-rich splicing factor 4 OS=Mus musculus OX=10090 GN=Srsf4 PE=2 SV=1; Sfrs4 protein OS=Mus musculus OX=10090 GN=Srsf4 PE=2 SV=1 0 2 2 0.619 0 1 1 1 514.25238 1027.49748 1027.5006 -3.04 -0.00156 0/0 0 0 1393245 HCD 30 MS2 18.74846 136.3 110 28.7135 5383 5383 5381 QEplus033719.raw F4 161.7 118 157.5 116.8 141.2 122.9 21 2.31 1 FALSE 1.14E-05 0.0003857 0.744 -250 9175 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEADRDTYRR [R].gEADRDTYRR.[S] N-Term(TMT6plex) 4 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" P63325; Q3UW83; A0A338P7K4; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 2 4 4 0.5547 0 1 1 1 367.69305 1467.75039 1467.75017 0.15 0.00005 0/0 0 0 13768782 HCD 30 MS2 7.557086 428.6 74.992 28.7202 5386 5386 5381 QEplus033719.raw F4 413.4 382.4 475.1 369.2 485 446.4 203 3.93 2 FALSE 5.44E-05 0.002079 0.595 -250 9181 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HALDAHQR [R].hALDAHQR.[S] N-Term(TMT6plex) 3 Q9D1K2 V-type proton ATPase subunit F OS=Mus musculus OX=10090 GN=Atp6v1f PE=1 SV=2 Q9D1K2; A0A0N4SVE1; F7B2B4 V-type proton ATPase subunit F OS=Mus musculus OX=10090 GN=Atp6v1f PE=1 SV=2; V-ATPase 14 kDa subunit OS=Mus musculus OX=10090 GN=Atp6v1f PE=1 SV=1; V-ATPase 14 kDa subunit (Fragment) OS=Mus musculus OX=10090 GN=Atp6v1f PE=1 SV=1 0 3 3 0.6337 0 1 1 1 392.8858 1176.64286 1176.64352 -0.56 -0.00022 0/0 0 0 8035930.5 HCD 30 MS2 27.37918 309.6 110 28.7227 5387 5387 5381 QEplus033719.raw F4 501.5 179.5 298.7 302 283.2 292.4 310 4.86 1 FALSE 1.14E-05 2.61E-09 1.728 -250 9190 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEADRDTYRR [R].gEADRDTYRR.[S] N-Term(TMT6plex) 4 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" P63325; Q3UW83; A0A338P7K4; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 2 3 3 0.5718 0 1 1 1 489.92197 1467.75135 1467.75017 0.8 0.00039 0/0 0 0 6201746 HCD 30 MS2 2.182208 342.4 110 28.7252 5388 5388 5381 QEplus033719.raw F4 316.9 320.1 388.2 289.7 386.5 352.7 213 4.04 2 FALSE 0.0008183 0.01116 0.386 -250 9197 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGAVGERGDR [R].dGAVGERGDR.[G] N-Term(TMT6plex) 1 Q3U962 Collagen alpha-2(V) chain OS=Mus musculus OX=10090 GN=Col5a2 PE=1 SV=1 Q3U962 Collagen alpha-2(V) chain OS=Mus musculus OX=10090 GN=Col5a2 PE=1 SV=1 1 3 3 0.2962 0 1 1 1 420.88809 1260.64972 1260.64939 0.26 0.00011 0/0 0 0 5723404 HCD 30 MS2 24.55941 293.4 110 28.7277 5389 5389 5381 QEplus033719.raw F4 461.1 171.5 288.4 251.3 313.6 274.4 179 2.6 1 FALSE 6.52E-05 0.002689 0.569 -250 9204 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMDASDR [R].rMDASDR.[G] N-Term(TMT6plex) 7 P47738 "Aldehyde dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1" P47738; Q3TVM2; A0A0G2JEU1; Q3UJW1; D3YYF3; Q3U9J7; Q3U6I3 "Aldehyde dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1; Aldehyde dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1; Aldehyde dehydrogenase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1" 1 2 2 0.3818 0 1 1 1 540.27747 1079.54766 1079.54651 1.06 0.00057 0/0 0 0 4751503 HCD 30 MS2 13.62793 170.3 110 28.7302 5390 5390 5381 QEplus033719.raw F4 308.1 114.9 191.8 150.2 122.1 134.4 123 2.2 1 FALSE 0.0003996 0.007134 0.455 -250 9212 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAAPGQQR [K].eAAPGQQR.[L] N-Term(TMT6plex) 3 A0A494BA87 Cytosolic iron-sulfur assembly component 3 OS=Mus musculus OX=10090 GN=Ciao3 PE=1 SV=1 Q7TMW6-2; A0A494BA87; Q7TMW6 Isoform 2 of Cytosolic iron-sulfur assembly component 3 OS=Mus musculus OX=10090 GN=Ciao3; Cytosolic iron-sulfur assembly component 3 OS=Mus musculus OX=10090 GN=Ciao3 PE=1 SV=1; Cytosolic iron-sulfur assembly component 3 OS=Mus musculus OX=10090 GN=Ciao3 PE=1 SV=2 0 2 2 0.5719 0 1 1 1 543.2984 1085.58953 1085.59009 -0.52 -0.00028 0/0 0 0 1517655.875 HCD 30 MS2 24.83465 161.7 110 28.7327 5391 5391 5381 QEplus033719.raw F4 225 127.4 175.8 134.6 170.1 137.1 144 2.78 1 FALSE 0.001395 0.01999 0.281 -250 9215 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEQEAAR [K].eAEQEAAR.[R] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5818 0 1 1 1 566.7937 1132.58013 1132.57958 0.48 0.00027 0/0 0 0 17960646 HCD 30 MS2 8.763589 560 88.967 28.74 5393 5393 5392 QEplus033719.raw F4 923.2 380.6 606.3 489.6 489.9 470.4 127 3.18 2 FALSE 1.14E-05 0.0001769 0.81 -250 9223 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMDASDR [R].rMDASDR.[G] N-Term(TMT6plex) 7 P47738 "Aldehyde dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1" P47738; Q3TVM2; A0A0G2JEU1; Q3UJW1; D3YYF3; Q3U9J7; Q3U6I3 "Aldehyde dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1; Aldehyde dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1; Aldehyde dehydrogenase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1" 1 3 3 0.4528 0 1 1 1 360.52051 1079.54697 1079.54651 0.43 0.00015 0/0 0 0 35449976 HCD 30 MS2 11.68583 325.4 35.496 28.7447 5395 5395 5392 QEplus033719.raw F4 420.9 230.9 412.3 290.5 303.6 294 123 3.07 1 FALSE 0.001108 0.01448 0.339 -250 9231 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATVQSR [K].aTVQSR.[E] N-Term(TMT6plex) 7 Q5SX40; Q5SX39 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1 Q5SX40; Q5SX39; Q1WJJ3; Q3UUB1; B2RWX0; Q1WNQ6; Q8BLW0 "Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Skeletal muscle myosin heavy chain II-b transcript variant 8 (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-1 (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1" 0 2 2 0.0909 0 1 1 1 445.76666 890.52605 890.5257 0.4 0.00018 0/0 0 0 8532290 HCD 30 MS2 49.88312 746.6 94.096 28.747 5396 5396 5392 QEplus033719.raw F4 1520.2 255.7 542.1 836.2 247.4 1077.9 86 1.76 2 FALSE 0.00736 0.118 -0.038 -250 9241 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MREESGAR [K-].mREESGAR.[I] N-Term(TMT6plex) 24 Q61990; P57722 Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1;Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3 A0A2R8VHY9; Q61990; Q61990-3; A0A2R8VI71; A0A2R8VHI3; A0A2R8VI25; Q3TF69; B2M1R7; A0A2R8VHN3; Q61990-2; A0A2R8W6L5; Q8CFQ6; Q3TT81; P57722; A0A2R8VI12; A0A2R8VHG2; A0A2R8VKN0; A0A2R8VHP9; P57722-2; A0A2R8VKF0; A0A2R8VI73; E9Q7D8; A0A2R8VHZ0; A0A2R8VJY1 Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 3 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pcbp2 PE=2 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Pcbp3 protein OS=Mus musculus OX=10090 GN=Pcbp3 PE=2 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1 1 3 3 0.4589 0 1 1 1 388.87119 1164.599 1164.59927 -0.23 -0.00009 0/0 0 0 6808948.5 HCD 30 MS2 19.60826 366.9 110 28.7495 5397 5397 5392 QEplus033719.raw F4 583.8 260.9 440.9 303.5 294 318.4 212 3.16 2 FALSE 0.0003996 0.007048 0.457 -250 9269 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSDERPVSGQDRDR [R].sSDERPVSGQDRDR.[D] N-Term(TMT6plex) 1 Q8BIZ6 Smad nuclear-interacting protein 1 OS=Mus musculus OX=10090 GN=Snip1 PE=1 SV=1 Q8BIZ6 Smad nuclear-interacting protein 1 OS=Mus musculus OX=10090 GN=Snip1 PE=1 SV=1 1 4 4 0.5616 0 1 1 1 458.98108 1832.90249 1832.90483 -1.28 -0.00059 0/0 0 0 1012132.125 HCD 30 MS2 39.33106 119.4 110 28.7595 5401 5401 5392 QEplus033719.raw F4 160.7 97.8 141.7 87.9 105.2 123 151 2.92 1 FALSE 0.0009633 0.01304 0.358 -250 9287 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEGESPQAR [R].gEGESPQAR.[A] N-Term(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 2 2 0.7663 0 1 1 1 580.29871 1159.59014 1159.59048 -0.3 -0.00017 0/0 0 0 1838699.75 HCD 30 MS2 16.93549 110 110 28.7693 5404 5404 5403 QEplus033719.raw F4 135.2 79.7 117.2 84.9 136.9 106.1 72 2.61 1 FALSE 1.14E-05 0.0005886 0.708 -250 9291 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEADRDTYRR [R].gEADRDTYRR.[S] N-Term(TMT6plex) 4 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" P63325; Q3UW83; A0A338P7K4; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 2 2 2 0.5188 0 1 1 1 734.37915 1467.75102 1467.75017 0.58 0.00043 0/0 0 0 3347177.5 HCD 30 MS2 0 31.6 110 28.7719 5405 5405 5403 QEplus033719.raw F4 27.5 26.8 41.1 28.1 37.7 28.7 206 2.93 2 FALSE 1.14E-05 8.63E-05 0.869 -250 9319 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTPASGER [K].tTPASGER.[G] N-Term(TMT6plex) 5 Q7M739 Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1 Q8K2T9; Q7M739; F6ZDS4; F6RX08; Q3UVR0 Tpr protein OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1 0 2 2 0.4708 0 1 1 1 524.28595 1047.56462 1047.5632 1.35 0.00071 0/0 0 0 3968508.75 HCD 30 MS2 19.7346 300.5 110 28.7816 5409 5409 5403 QEplus033719.raw F4 523.5 230.2 327.4 226.7 256.5 238.8 248 3.25 1 FALSE 5.44E-05 0.002144 0.592 -250 9325 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYGSSSDSR [R].gYGSSSDSR.[Y] N-Term(TMT6plex) 1 Q9JLJ1 Selenoprotein K OS=Mus musculus OX=10090 GN=Selenok PE=1 SV=3 Q9JLJ1 Selenoprotein K OS=Mus musculus OX=10090 GN=Selenok PE=1 SV=3 0 2 2 0.5427 0 1 1 1 572.77527 1144.54326 1144.5432 0.06 0.00003 0/0 0 0 3112016.75 HCD 30 MS2 31.90508 286.3 110 28.7841 5410 5410 5403 QEplus033719.raw F4 357.2 236.1 313.1 253.5 302.3 255.6 51 2.34 1 FALSE 1.14E-05 0.0008202 0.68 -250 9337 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRPQEEHSPEESERR [R].qRPQEEHSPEESERR.[A] N-Term(TMT6plex) 2 Q3UKS6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Mrpl40 PE=1 SV=1 Q3UKS6; D3Z7C0 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Mrpl40 PE=1 SV=1; 39S ribosomal protein L40, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl40 PE=1 SV=1" 1 4 4 0.5814 0 1 1 1 531.51569 2123.04091 2123.04272 -0.85 -0.00045 0/0 0 0 1441160.25 HCD 30 MS2 21.95099 95 110 28.7891 5412 5412 5403 QEplus033719.raw F4 139.1 72.3 91.6 92.7 90.1 83.9 173 3.01 1 FALSE 1.14E-05 3.17E-07 1.332 -250 9360 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGEPHVTR [R].rGEPHVTR.[R] N-Term(TMT6plex) 4 P62715; P63330 Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Mus musculus OX=10090 GN=Ppp2cb PE=1 SV=1;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Mus musculus OX=10090 GN=Ppp2ca PE=1 SV=1 P62715; Q8BN07; Q8VED4; P63330 Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Mus musculus OX=10090 GN=Ppp2cb PE=1 SV=1; Serine/threonine-protein phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Mus musculus OX=10090 GN=Ppp2ca PE=1 SV=1 1 3 3 0.6271 0 1 1 1 394.22986 1180.67502 1180.67482 0.17 0.00007 0/0 0 0 14342246 HCD 30 MS2 15.09712 230.5 84.729 28.8059 5418 5418 5414 QEplus033719.raw F4 311.9 166.6 202.8 211.4 323.3 167.3 262 3.62 2 FALSE 1.14E-05 1.37E-07 1.402 -250 9374 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERGPGGQQPPQHR [K].eRGPGGQQPPQHR.[V] N-Term(TMT6plex) 1 Q6R891 Neurabin-2 OS=Mus musculus OX=10090 GN=Ppp1r9b PE=1 SV=1 Q6R891 Neurabin-2 OS=Mus musculus OX=10090 GN=Ppp1r9b PE=1 SV=1 1 4 4 0.5337 0 1 1 1 418.97623 1672.88308 1672.88291 0.1 0.00004 0/0 0 0 5664778.5 HCD 30 MS2 44.43639 179.2 110 28.8108 5420 5420 5414 QEplus033719.raw F4 197 125.6 204.8 130.9 222.4 194.4 297 3.26 1 FALSE 1.14E-05 0.0001208 0.841 -250 9392 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEAEAAR [K].aEAEAAR.[E] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.4318 0 1 1 2 473.76221 946.51714 946.51553 1.7 0.00081 0/0 0 0 1599572.875 HCD 30 MS2 39.03704 282.6 110 28.8183 5423 5423 5414 QEplus033719.raw F4 642.8 166.3 267.1 155.5 157 306.7 177 1.76 2 FALSE 0.0002218 0.004543 0.513 -250 9406 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGEPHVTR [R].rGEPHVTR.[R] N-Term(TMT6plex) 4 P62715; P63330 Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Mus musculus OX=10090 GN=Ppp2cb PE=1 SV=1;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Mus musculus OX=10090 GN=Ppp2ca PE=1 SV=1 P62715; Q8BN07; Q8VED4; P63330 Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Mus musculus OX=10090 GN=Ppp2cb PE=1 SV=1; Serine/threonine-protein phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Mus musculus OX=10090 GN=Ppp2ca PE=1 SV=1 1 2 2 0.4354 0 1 1 1 590.84167 1180.67607 1180.67482 1.06 0.00063 0/0 0 0 1320749.875 HCD 30 MS2 0 42.3 110 28.8282 5426 5426 5425 QEplus033719.raw F4 49.4 33.8 34.5 35.3 63.5 37.6 248 2.09 2 FALSE 0.0001187 0.003149 0.553 -250 9417 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESENVR [R].eSENVR.[I] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A2AT70; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.2436 0 1 1 1 481.75894 962.51061 962.51044 0.17 0.00008 0/0 0 0 7739879.5 HCD 30 MS2 9.782276 482.7 110 28.8332 5428 5428 5425 QEplus033719.raw F4 987.7 166.8 442.2 541.6 165.2 592.4 136 2.34 2 FALSE 0.002071 0.03854 0.18 -250 9423 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DCSVQR [R].dcSVQR.[R] N-Term(TMT6plex); C2(Carbamidomethyl) 5 Q5SWU9; Q99MR8 "Acetyl-CoA carboxylase 1 OS=Mus musculus OX=10090 GN=Acaca PE=1 SV=1;Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Mccc1 PE=1 SV=2" Q5SWU9-2; Q5SWU9; Q3TVD9; Q99MR8; A0A0G2JF64 "Isoform 2 of Acetyl-CoA carboxylase 1 OS=Mus musculus OX=10090 GN=Acaca; Acetyl-CoA carboxylase 1 OS=Mus musculus OX=10090 GN=Acaca PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mccc1 PE=2 SV=1; Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Mccc1 PE=1 SV=2; Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Mccc1 PE=1 SV=1" 0 2 2 0.322 0 1 1 1 497.25409 993.5009 993.4985 2.42 0.0012 0/0 0 0 6211837 HCD 30 MS2 10.3193 367.6 110 28.8357 5429 5429 5425 QEplus033719.raw F4 522.4 300.8 439.6 267.6 320.6 354.4 102 2.05 2 FALSE 0.006282 0.1021 0.001 -250 9432 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSQEEVR [K].sSQEEVR.[S] N-Term(TMT6plex) 4 Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 J3QMT0; Q9Z2X1-2; J3QM80; Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=8; Isoform 2 of Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf; Heterogeneous nuclear ribonucleoprotein F (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 0 2 2 0.5489 0 1 1 1 532.28345 1063.55962 1063.55812 1.41 0.00075 0/0 0 0 5142216 HCD 30 MS2 17.12384 382.1 110 28.8382 5430 5430 5425 QEplus033719.raw F4 531.9 341.7 441.4 302.7 384.4 290.6 191 2.66 1 FALSE 0.003793 0.07158 0.084 -250 9436 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDGSCDVR [K].gDGScDVR.[Y] N-Term(TMT6plex); C5(Carbamidomethyl) 7 B9EKP5; Q8VHX6 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1;Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3" Q3U7N9; B7FAV1; B9EKP5; Q8BTM8; Q8VHX6-2; Q8VHX6; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.6798 0 1 1 1 547.75916 1094.51103 1094.50979 1.14 0.00062 0/0 0 0 2660418.5 HCD 30 MS2 20.55127 236.3 110 28.8406 5431 5431 5425 QEplus033719.raw F4 310.4 134.7 275.2 174 287.9 235.7 47 2.53 2 FALSE 1.14E-05 0.0001029 0.855 -250 9439 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAQGSDPQPR [K].qAQGSDPQPR.[C] N-Term(TMT6plex) 9 Q6ZPR5 Sphingomyelin phosphodiesterase 4 OS=Mus musculus OX=10090 GN=Smpd4 PE=1 SV=2 Q6ZPR5; A0A338P695; A0A338P6S3; Q6ZPR5-3; Q6ZPR5-2; A0A338P735; Q6ZPR5-5; Q6ZPR5-4; A0A338P7L1 Sphingomyelin phosphodiesterase 4 OS=Mus musculus OX=10090 GN=Smpd4 PE=1 SV=2; Sphingomyelin phosphodiesterase 4 OS=Mus musculus OX=10090 GN=Smpd4 PE=1 SV=1; Sphingomyelin phosphodiesterase 4 OS=Mus musculus OX=10090 GN=Smpd4 PE=1 SV=1; Isoform 3 of Sphingomyelin phosphodiesterase 4 OS=Mus musculus OX=10090 GN=Smpd4; Isoform 2 of Sphingomyelin phosphodiesterase 4 OS=Mus musculus OX=10090 GN=Smpd4; Sphingomyelin phosphodiesterase 4 OS=Mus musculus OX=10090 GN=Smpd4 PE=1 SV=1; Isoform 5 of Sphingomyelin phosphodiesterase 4 OS=Mus musculus OX=10090 GN=Smpd4; Isoform 4 of Sphingomyelin phosphodiesterase 4 OS=Mus musculus OX=10090 GN=Smpd4; Sphingomyelin phosphodiesterase 4 OS=Mus musculus OX=10090 GN=Smpd4 PE=1 SV=1 0 2 2 0.6826 0 1 1 1 656.84528 1312.68328 1312.68069 1.97 0.00129 0/0 0 0 2067593.125 HCD 30 MS2 0 90.2 110 28.8432 5432 5432 5425 QEplus033719.raw F4 89.1 82.3 97.9 74.7 107.3 89.9 205 2.93 1 FALSE 1.14E-05 2.28E-06 1.169 -250 9447 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNSNSLNR [K].nNSNSLNR.[M] N-Term(TMT6plex) 4 Q0VGB7 Serine/threonine-protein phosphatase 4 regulatory subunit 2 OS=Mus musculus OX=10090 GN=Ppp4r2 PE=1 SV=1 Q0VGB7; A0A0N4SVH3; A0A0R4J0U2; A4QMV1 Serine/threonine-protein phosphatase 4 regulatory subunit 2 OS=Mus musculus OX=10090 GN=Ppp4r2 PE=1 SV=1; Serine/threonine-protein phosphatase 4 regulatory subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Ppp4r2 PE=1 SV=1; Serine/threonine-protein phosphatase 4 regulatory subunit 2 OS=Mus musculus OX=10090 GN=Ppp4r2 PE=1 SV=1; Ppp4r2 protein (Fragment) OS=Mus musculus OX=10090 GN=Ppp4r2 PE=2 SV=1 0 2 2 0.4286 0 1 1 1 574.30487 1147.60246 1147.60171 0.65 0.00038 0/0 0 0 1239149.125 HCD 30 MS2 34.42849 139.1 110 28.8457 5433 5433 5425 QEplus033719.raw F4 189.6 116.8 154.3 111.9 149.3 112.9 167 2.8 1 FALSE 0.0009075 0.0125 0.366 -250 9452 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNEGGNTQPEDQR [K].sNEGGNTQPEDQR.[K] N-Term(TMT6plex) 2 A0A171EBL2 E3 ubiquitin-protein ligase RNF213 OS=Mus musculus OX=10090 GN=Rnf213 PE=1 SV=1 A0A171EBL2; E9Q555 E3 ubiquitin-protein ligase RNF213 OS=Mus musculus OX=10090 GN=Rnf213 PE=1 SV=1; E3 ubiquitin-protein ligase RNF213 OS=Mus musculus OX=10090 GN=Rnf213 PE=1 SV=2 0 2 2 0.7966 0 1 1 1 830.89038 1660.77349 1660.77242 0.64 0.00053 0/0 0 0 1175705.25 HCD 30 MS2 0 44.6 110 28.8482 5434 5434 5425 QEplus033719.raw F4 42.1 56.5 51.6 26.4 50.8 40.2 54 3.54 1 FALSE 1.14E-05 1.27E-11 2.167 -250 9474 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGSDGYGSGR [R].gGSDGYGSGR.[G] N-Term(TMT6plex) 4 O88569 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2 O88569-3; B7ZP22; O88569; O88569-2 Isoform 3 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2; Isoform 2 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 0 2 2 0.6931 0 1 1 1 571.2757 1141.54411 1141.54353 0.51 0.00029 0/0 0 0 17262508 HCD 30 MS2 10.97821 740.2 98.355 28.8603 5438 5438 5436 QEplus033719.raw F4 817.5 669.3 755.9 587.3 1041.3 569.6 48 3.03 1 FALSE 1.14E-05 1.87E-05 0.996 -250 9491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QNSVSSNTSQR [R].qNSVSSNTSQR.[G] N-Term(TMT6plex) 4 Q3UDC3 Target of Myb protein 1 OS=Mus musculus OX=10090 GN=Tom1 PE=1 SV=1 Q3UDC3; A0A1D5RM84; O88746; A0A1D5RM45 Target of Myb protein 1 OS=Mus musculus OX=10090 GN=Tom1 PE=1 SV=1; Target of Myb protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Tom1 PE=1 SV=1; Target of Myb protein 1 OS=Mus musculus OX=10090 GN=Tom1 PE=1 SV=1; Target of Myb protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Tom1 PE=1 SV=1 0 2 2 0.6635 0 1 1 1 718.87 1436.73271 1436.7291 2.52 0.00181 0/0 0 0 1136971.625 HCD 30 MS2 0 109.7 110 28.8678 5441 5441 5436 QEplus033719.raw F4 123.3 65.8 125.9 134.9 73.4 135.1 210 4.25 1 FALSE 1.14E-05 1.31E-09 1.785 -250 9498 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNEGGNTQPEDQR [K].sNEGGNTQPEDQR.[K] N-Term(TMT6plex) 2 A0A171EBL2 E3 ubiquitin-protein ligase RNF213 OS=Mus musculus OX=10090 GN=Rnf213 PE=1 SV=1 A0A171EBL2; E9Q555 E3 ubiquitin-protein ligase RNF213 OS=Mus musculus OX=10090 GN=Rnf213 PE=1 SV=1; E3 ubiquitin-protein ligase RNF213 OS=Mus musculus OX=10090 GN=Rnf213 PE=1 SV=2 0 3 3 0.7051 0 1 1 1 554.26337 1660.77555 1660.77242 1.88 0.00104 0/0 0 0 1210067.75 HCD 30 MS2 28.46848 58.5 110 28.8729 5443 5443 5436 QEplus033719.raw F4 70 49.7 67.5 46 68.5 49.6 57 4.51 1 FALSE 1.14E-05 7.91E-08 1.447 -250 9502 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQQSEVTR [K].sQQSEVTR.[I] N-Term(TMT6plex) 1 Q91VW3 SH3 domain-binding glutamic acid-rich-like protein 3 OS=Mus musculus OX=10090 GN=Sh3bgrl3 PE=1 SV=1 Q91VW3 SH3 domain-binding glutamic acid-rich-like protein 3 OS=Mus musculus OX=10090 GN=Sh3bgrl3 PE=1 SV=1 0 2 2 0.5351 0 1 1 1 582.315 1163.62273 1163.62178 0.81 0.00047 0/0 0 0 12175002 HCD 30 MS2 43.34543 597.5 95.2 28.8751 5444 5444 5436 QEplus033719.raw F4 665.5 612.7 609.2 369.3 939 389.5 269 2.99 1 FALSE 1.14E-05 7.31E-05 0.883 -250 9516 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HRLNPENR [R].hRLNPENR.[T] N-Term(TMT6plex) 1 O70579 Peroxisomal membrane protein PMP34 OS=Mus musculus OX=10090 GN=Slc25a17 PE=1 SV=1 O70579 Peroxisomal membrane protein PMP34 OS=Mus musculus OX=10090 GN=Slc25a17 PE=1 SV=1 1 3 3 0.5349 0 1 1 1 422.2402 1264.70606 1264.70718 -0.89 -0.00037 0/0 0 0 3758830.25 HCD 30 MS2 23.73324 185 110 28.8799 5446 5446 5436 QEplus033719.raw F4 201.2 169.3 221 123.2 227.8 167.5 407 3.01 1 FALSE 0.0001603 0.003707 0.536 -250 9521 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RETQTDSVSR [K].rETQTDSVSR.[Y] N-Term(TMT6plex) 4 Q9DBR7 Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2 Q3TS88; Q9DBR7; A0A1W2P750; Q9DBR7-2 PRKG1_interact domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ppp1r12a PE=2 SV=1; Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2; Protein phosphatase 1 regulatory subunit 12A (Fragment) OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=1; Isoform 2 of Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a 1 3 3 0.625 0 1 1 1 469.91812 1407.73981 1407.73894 0.62 0.00029 0/0 0 0 3180593.75 HCD 30 MS2 9.956707 115.1 110 28.8872 5448 5448 5447 QEplus033719.raw F4 142.2 80.7 124.3 81.3 146.8 115.4 249 4.96 1 FALSE 1.14E-05 2.18E-07 1.363 -250 9528 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGGNSSSSGSGSGSGSGSPSTGSSGSSSSPGAR [K].gGGGNSSSSGSGSGSGSGSPSTGSSGSSSSPGAR.[R] N-Term(TMT6plex) 14 Q8BQK0 TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Asph PE=2 SV=1 Q8BQK0; A2AL85; Q9EQ65; A2AL78; Q9EQ66; Q91WG6; A2AL79; Q8BSY0; Q8BSY0-3; Q3TU40; A2AL81; Q9EQ67; A2AL83; Q8CH79 TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Asph PE=2 SV=1; Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1; Aspartyl beta-hydroxylase 2.8 kb transcript OS=Mus musculus OX=10090 GN=Asph PE=2 SV=1; Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1; Aspartly beta-hydroxylase OS=Mus musculus OX=10090 GN=ASPH PE=3 SV=1; Asph protein OS=Mus musculus OX=10090 GN=Asph PE=2 SV=1; Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1; Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1; Isoform 3 of Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus OX=10090 GN=Asph; Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1; Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1; Aspartyl beta-hydroxylase Humbug splice variant OS=Mus musculus OX=10090 GN=ASPH PE=4 SV=1; Aspartyl/asparaginyl beta-hydroxylase (Fragment) OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1; Junctin-2 OS=Mus musculus OX=10090 GN=Asph PE=2 SV=1 0 3 3 0.8695 0 1 1 1 987.76746 2961.28781 2961.28515 0.9 0.00089 0/0 0 0 3273174.75 HCD 30 MS2 0 14.9 110 28.8897 5449 5449 5447 QEplus033719.raw F4 11 16 15.4 15 17.7 14 19 9.73 1 FALSE 1.14E-05 6.31E-16 4.599 -250 9532 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAGHHELAER [R].qAGHHELAER.[L] N-Term(TMT6plex) 2 Q68FF6 ARF GTPase-activating protein GIT1 OS=Mus musculus OX=10090 GN=Git1 PE=1 SV=1 Q68FF6; Q5F258 ARF GTPase-activating protein GIT1 OS=Mus musculus OX=10090 GN=Git1 PE=1 SV=1; ARF GTPase-activating protein GIT1 OS=Mus musculus OX=10090 GN=Git1 PE=1 SV=1 0 3 3 0.5338 0 1 1 1 459.57932 1376.72339 1376.72323 0.12 0.00006 0/0 0 0 3488132.75 HCD 30 MS2 44.26042 215 110 28.8945 5451 5451 5447 QEplus033719.raw F4 279.6 164.8 240.7 202.9 212.9 189 262 4.29 1 FALSE 1.14E-05 1.27E-08 1.597 -250 9564 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERGPGGQQPPQHR [K].eRGPGGQQPPQHR.[V] N-Term(TMT6plex) 1 Q6R891 Neurabin-2 OS=Mus musculus OX=10090 GN=Ppp1r9b PE=1 SV=1 Q6R891 Neurabin-2 OS=Mus musculus OX=10090 GN=Ppp1r9b PE=1 SV=1 1 3 3 0.3889 0 1 1 1 558.30249 1672.89292 1672.88291 5.98 0.00333 0/0 0 0 3207751.75 HCD 30 MS2 22.1834 188.4 110 28.9095 5457 5457 5447 QEplus033719.raw F4 203.8 184 202.2 154.5 234 151.6 307 1.8 1 FALSE 5.44E-05 0.002547 0.575 -250 9587 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSSSSMTSR [K].gSSSSMTSR.[V] N-Term(TMT6plex) 3 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; Q9JJY2; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin (Fragment) OS=Mus musculus OX=10090 GN=des PE=4 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 2 2 0.7232 0 1 1 1 564.78015 1128.55303 1128.55165 1.22 0.00069 0/0 0 0 61218640 HCD 30 MS2 2.195055 593.7 24.02 28.9216 5461 5461 5458 QEplus033719.raw F4 1102.3 154 540.8 926 160 679.3 55 2.89 1 FALSE 1.14E-05 2.66E-05 0.967 -250 9595 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDRTEERDPPR [K].dDRTEERDPPR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; A0A494B9I0 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Eukaryotic translation initiation factor 3 subunit A (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=1 2 4 4 0.6284 0 1 1 1 404.45633 1614.80349 1614.80333 0.1 0.00004 0/0 0 0 7949771.5 HCD 30 MS2 25.95672 291.7 110 28.924 5462 5462 5458 QEplus033719.raw F4 315.5 153 388.4 211.3 390.7 291.4 151 4.01 1 FALSE 1.14E-05 0.0002668 0.775 -250 9601 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDRTEERDPPR [K].dDRTEERDPPR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; A0A494B9I0 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Eukaryotic translation initiation factor 3 subunit A (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=1 2 3 3 0.6053 0 1 1 1 538.93964 1614.80436 1614.80333 0.64 0.00034 0/0 0 0 4390692.5 HCD 30 MS2 19.37912 128 110 28.9265 5463 5463 5458 QEplus033719.raw F4 171.9 85.5 123.1 99.8 143.9 143.6 153 3.37 1 FALSE 1.14E-05 0.000545 0.715 -250 9608 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGYGGSR [R].dGYGGSR.[D] N-Term(TMT6plex) 4 Q9WV02; Q91VM5 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1;RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" A0A2I3BRL8; Q9WV02; Q91VM5; S4R1F6 "Predicted gene 7324 OS=Mus musculus OX=10090 GN=Gm7324 PE=4 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1" 0 2 2 0.5038 0 1 1 1 470.73877 940.47026 940.46858 1.79 0.00084 0/0 0 0 4187581.25 HCD 30 MS2 31.90152 421.9 110 28.929 5464 5464 5458 QEplus033719.raw F4 524.3 396.9 500 264.7 514.9 330.7 10 2.6 2 FALSE 0.0004091 0.007335 0.452 -250 9616 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECGNAHYQR [R].ecGNAHYQR.[A] N-Term(TMT6plex); C2(Carbamidomethyl) 3 O35465-2 Isoform 2 of Peptidyl-prolyl cis-trans isomerase FKBP8 OS=Mus musculus OX=10090 GN=Fkbp8 O35465; O35465-2; C9K0Z7 Peptidyl-prolyl cis-trans isomerase FKBP8 OS=Mus musculus OX=10090 GN=Fkbp8 PE=1 SV=2; Isoform 2 of Peptidyl-prolyl cis-trans isomerase FKBP8 OS=Mus musculus OX=10090 GN=Fkbp8; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp8 PE=2 SV=1 0 3 3 0.8341 0 1 1 1 455.21747 1363.63785 1363.63745 0.3 0.00013 0/0 0 0 3579029 HCD 30 MS2 24.14746 152.6 110 28.9315 5465 5465 5458 QEplus033719.raw F4 181.4 117.1 146.9 153.2 162 154.9 41 4.58 1 FALSE 1.14E-05 7.75E-10 1.828 -250 9634 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSVSQQR [R].tSVSQQR.[H] N-Term(TMT6plex) 3 A0A0R4J0Q4 Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Loxl1 PE=1 SV=1 A0A0R4J0Q4; Q8BP04; P97873 Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Loxl1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Loxl1 PE=2 SV=1; Lysyl oxidase homolog 1 OS=Mus musculus OX=10090 GN=Loxl1 PE=2 SV=3 0 2 2 0.5763 0 1 1 2 517.79382 1034.58037 1034.57919 1.14 0.00059 0/0 0 0 793893.0625 HCD 30 MS2 15.87555 127.9 110 28.939 5468 5468 5458 QEplus033719.raw F4 229 94.5 173.8 76.4 80.8 113.1 230 2.36 1 FALSE 0.00079 0.01099 0.389 -250 9659 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NGECVNDR [R].nGEcVNDR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 3 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q3TNW1 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1 0 2 2 0.6818 0 1 1 1 596.78265 1192.55803 1192.5578 0.19 0.00012 0/0 0 0 4485117 HCD 30 MS2 0 278.4 110 28.9514 5472 5472 5469 QEplus033719.raw F4 304 150.7 300.8 430.7 167.1 317.1 35 3.3 1 FALSE 1.14E-05 0.000214 0.794 -250 9674 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQEDMNR [R].sQEDMNR.[E] N-Term(TMT6plex) 6 Q3TIH8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zpr1 PE=2 SV=1 Q3TIH8; Q9JJA1; Q3TI08; Q62384; Q3TY03; Q8C8U3 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Zpr1 PE=2 SV=1; Brain cDNA, clone MNCb-6015, similar to Mus musculus zinc finger protein 259 (Zfp259), mRNA OS=Mus musculus OX=10090 GN=Zpr1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Zpr1 PE=2 SV=1; Zinc finger protein ZPR1 OS=Mus musculus OX=10090 GN=Zpr1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zpr1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zpr1 PE=2 SV=1" 0 2 2 0.5163 0 1 1 1 554.76678 1108.52629 1108.52544 0.77 0.00043 0/0 0 0 2485604 HCD 30 MS2 32.33997 185.6 110 28.9563 5474 5474 5469 QEplus033719.raw F4 215.5 154.9 216.4 136.8 212.8 177 42 2.15 1 FALSE 0.0006294 0.009549 0.412 -250 9682 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDRDLSR [K].qDRDLSR.[I] N-Term(TMT6plex) 5 E9Q852 Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=2 E9Q852; E9PYX7; E9Q9C3; Q9QZQ1; Q9QZQ1-2 Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=2; Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=1; Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=1; Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=3; Isoform 1 of Afadin OS=Mus musculus OX=10090 GN=Afdn 1 3 3 0.2314 0 1 1 1 373.54205 1118.61161 1118.61155 0.05 0.00002 0/0 0 0 2092569.5 HCD 30 MS2 19.17127 167.4 110 28.9588 5475 5475 5469 QEplus033719.raw F4 223.6 141.4 181.2 120.2 199.5 138.4 267 2.29 1 FALSE 0.006767 0.1077 -0.014 -250 9702 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGAGTQGGDEAQGQGDDR [K].gGAGTQGGDEAQGQGDDR.[T] N-Term(TMT6plex) 2 Q80VI1 E3 ubiquitin-protein ligase TRIM56 OS=Mus musculus OX=10090 GN=Trim56 PE=1 SV=1 A0A0R4J0Q6; Q80VI1 E3 ubiquitin-protein ligase TRIM56 OS=Mus musculus OX=10090 GN=Trim56 PE=1 SV=1; E3 ubiquitin-protein ligase TRIM56 OS=Mus musculus OX=10090 GN=Trim56 PE=1 SV=1 0 3 3 0.8625 0 1 1 1 635.6236 1904.85624 1904.85319 1.6 0.00102 0/0 0 0 2266000.75 HCD 30 MS2 34.16874 90.1 110 28.9689 5479 5479 5469 QEplus033719.raw F4 135.9 58.8 96.3 106.1 60.5 82.9 23 4.51 1 FALSE 1.14E-05 6.83E-13 2.408 -250 9713 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQSDSEDNVR [K].sQSDSEDNVR.[K] N-Term(TMT6plex) 4 Q8CHG3 GRIP and coiled-coil domain-containing protein 2 OS=Mus musculus OX=10090 GN=Gcc2 PE=1 SV=2 Q8CHG3; B2RSU7; E0CYI9; E9PWI6 GRIP and coiled-coil domain-containing protein 2 OS=Mus musculus OX=10090 GN=Gcc2 PE=1 SV=2; GRIP and coiled-coil domain containing 2 OS=Mus musculus OX=10090 GN=Gcc2 PE=1 SV=1; GRIP and coiled-coil domain-containing protein 2 OS=Mus musculus OX=10090 GN=Gcc2 PE=1 SV=1; GRIP and coiled-coil domain-containing protein 2 OS=Mus musculus OX=10090 GN=Gcc2 PE=1 SV=1 0 2 2 0.72 0 1 1 1 683.32611 1365.64495 1365.64437 0.42 0.00029 0/0 0 0 2004639.375 HCD 30 MS2 13.03908 87.1 110 28.9787 5482 5482 5480 QEplus033719.raw F4 97.9 77.3 94.3 69.6 104.8 78.6 55 2.75 1 FALSE 1.14E-05 5.46E-07 1.287 -250 9722 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQIMHR [K].hQIMHR.[D] N-Term(TMT6plex) 3 Q91YS7 Dual-specificity mitogen-activated protein kinase kinase 2 OS=Mus musculus OX=10090 GN=Map2k2 PE=1 SV=1 Q91YS7; Q63932; Q3UPM3 Dual-specificity mitogen-activated protein kinase kinase 2 OS=Mus musculus OX=10090 GN=Map2k2 PE=1 SV=1; Dual specificity mitogen-activated protein kinase kinase 2 OS=Mus musculus OX=10090 GN=Map2k2 PE=1 SV=2; Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Map2k2 PE=2 SV=1 0 3 3 0.3248 0 1 1 1 350.86588 1050.58307 1050.58283 0.23 0.00008 0/0 0 0 3741581.25 HCD 30 MS2 16.48915 192 110 28.9837 5484 5484 5480 QEplus033719.raw F4 271.7 115.7 189.3 159.5 214 201.9 253 3.14 1 FALSE 1.14E-05 0.0009307 0.668 -250 9733 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDSESPGTQR [R].eDSESPGTQR.[S] N-Term(TMT6plex) 1 P97825 Jupiter microtubule associated homolog 1 OS=Mus musculus OX=10090 GN=Jpt1 PE=1 SV=3 P97825 Jupiter microtubule associated homolog 1 OS=Mus musculus OX=10090 GN=Jpt1 PE=1 SV=3 0 2 2 0.6818 0 1 1 1 667.82324 1334.63921 1334.63855 0.49 0.00033 0/0 0 0 585820.375 HCD 30 MS2 0 84.2 110 28.9887 5486 5486 5480 QEplus033719.raw F4 86.1 52.7 79.6 95.7 83.4 107.5 66 3.74 1 FALSE 1.14E-05 8.89E-07 1.247 -250 9742 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MYHTHR [K].mYHTHR.[R] N-Term(TMT6plex) 6 B9EK95 Myof protein OS=Mus musculus OX=10090 GN=Myof PE=2 SV=1 A0A286YDF5; B9EK95; Q69ZN7-4; E9Q390; A0A286YCZ3; Q69ZN7 Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=1; Myof protein OS=Mus musculus OX=10090 GN=Myof PE=2 SV=1; Isoform 4 of Myoferlin OS=Mus musculus OX=10090 GN=Myof; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=2; Myoferlin (Fragment) OS=Mus musculus OX=10090 GN=Myof PE=1 SV=1; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=2 0 3 3 0.3943 0 1 1 1 358.522 1073.55146 1073.5512 0.24 0.00009 0/0 0 0 4825181 HCD 30 MS2 64.65318 210.4 97.218 28.996 5489 5489 5480 QEplus033719.raw F4 336.6 89.4 186.4 334.3 120.5 195.1 88 2.79 1 FALSE 0.0003905 0.006987 0.458 -250 9756 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQGHTEPQP [K].rQGHTEPQP.[-] N-Term(TMT6plex) 5 E9PYH2 Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 PE=1 SV=1 Q91V12-3; E9PYH2; Q91V12-4; Q91V12; Q91V12-2 Isoform C of Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7; Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 PE=1 SV=1; Isoform D of Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7; Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 PE=1 SV=2; Isoform A of Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 1 3 3 0.4981 0 1 1 1 426.89838 1278.68058 1278.67521 4.19 0.00179 0/0 0 0 1252837.5 HCD 30 MS2 72.44237 118.7 110 29.0058 5492 5492 5491 QEplus033719.raw F4 222.8 65.3 99.7 118.7 117.1 88.6 265 2.63 1 FALSE 0.002015 0.03527 0.193 -250 9764 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDDYRGGGDR [R].dDDYRGGGDR.[Y] N-Term(TMT6plex) 8 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 3 3 0.5611 0 1 1 1 452.21118 1354.61899 1354.61849 0.37 0.00017 0/0 0 0 2870394.25 HCD 30 MS2 30.98094 195.5 110 29.0083 5493 5493 5491 QEplus033719.raw F4 258.9 135.2 189.6 184 220.3 185 38 2.21 1 FALSE 0.001421 0.0203 0.278 -250 9772 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGSDAAASRPR [K].aGSDAAASRPR.[A] N-Term(TMT6plex) 2 P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 Q3UFI4; P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=2 SV=1; 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 0 3 3 0.6409 0 1 1 1 429.90399 1287.69742 1287.69668 0.58 0.00025 0/0 0 0 18298038 HCD 30 MS2 26.97837 512.7 62.315 29.0105 5494 5494 5491 QEplus033719.raw F4 614.2 374.1 505.2 432 644.2 506.6 304 4.01 1 FALSE 1.14E-05 6.83E-09 1.649 -250 9785 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVSDSDTHR [R].eVSDSDTHR.[I] N-Term(TMT6plex) 3 Q3UQS9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1 O55124; Q3UQS9; Q14BI5 M-protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1; Myomesin 2 OS=Mus musculus OX=10090 GN=Myom2 PE=1 SV=1 0 3 3 0.6181 0 1 1 1 425.54407 1274.61765 1274.61742 0.18 0.00007 0/0 0 0 4736923.5 HCD 30 MS2 14.78952 176.4 110 29.0155 5496 5496 5491 QEplus033719.raw F4 238 78.5 151.5 309.6 150.2 130.4 66 4.53 1 FALSE 1.14E-05 2.47E-08 1.543 -250 9790 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEEDSEEAR [K].aEEDSEEAR.[E] N-Term(TMT6plex) 2 Q61081 Hsp90 co-chaperone Cdc37 OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1 Q61081; A0A1L1STC0 Hsp90 co-chaperone Cdc37 OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1; Hsp90 co-chaperone Cdc37 (Fragment) OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1 0 2 2 0.8249 0 1 1 1 632.79736 1264.58745 1264.58546 1.58 0.001 0/0 0 0 1137809.25 HCD 30 MS2 14.79577 132.6 110 29.0181 5497 5497 5491 QEplus033719.raw F4 147.7 103.4 132.2 106.6 186.5 119.5 34 3.54 1 FALSE 1.14E-05 4.27E-07 1.308 -250 9833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGSDAAASRPR [K].aGSDAAASRPR.[A] N-Term(TMT6plex) 2 P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 Q3UFI4; P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=2 SV=1; 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 0 2 2 0.5893 0 1 1 1 644.35254 1287.6978 1287.69668 0.87 0.00056 0/0 0 0 5190973.5 HCD 30 MS2 6.900673 149.8 110 29.0379 5504 5504 5502 QEplus033719.raw F4 163.5 109.9 147.4 129 205.6 143.2 329 3.19 1 FALSE 1.14E-05 3.48E-07 1.324 -250 9843 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGPTRPTAR [R].sGPTRPTAR.[D] N-Term(TMT6plex) 1 B2RWW1 Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=2 SV=1 B2RWW1 Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=2 SV=1 0 3 3 0.6264 0 1 1 1 391.23004 1171.67557 1171.67449 0.93 0.00036 0/0 0 0 12818726 HCD 30 MS2 25.61124 378.1 89.372 29.0401 5505 5505 5502 QEplus033719.raw F4 439.4 254.5 392 371.3 376.4 435.3 248 2.65 1 FALSE 0.001591 0.02474 0.246 -250 9854 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGQTPQER [K].aGQTPQER.[V] N-Term(TMT6plex) 6 Q922J9 Fatty acyl-CoA reductase 1 OS=Mus musculus OX=10090 GN=Far1 PE=1 SV=1 Q922J9-3; Q922J9-4; Q922J9-2; Q922J9; D3Z5W6; D3Z4N9 Isoform 3 of Fatty acyl-CoA reductase 1 OS=Mus musculus OX=10090 GN=Far1; Isoform 4 of Fatty acyl-CoA reductase 1 OS=Mus musculus OX=10090 GN=Far1; Isoform 2 of Fatty acyl-CoA reductase 1 OS=Mus musculus OX=10090 GN=Far1; Fatty acyl-CoA reductase 1 OS=Mus musculus OX=10090 GN=Far1 PE=1 SV=1; Fatty acyl-CoA reductase (Fragment) OS=Mus musculus OX=10090 GN=Far1 PE=1 SV=1; Fatty acyl-CoA reductase (Fragment) OS=Mus musculus OX=10090 GN=Far1 PE=1 SV=8 0 2 2 0.2717 0 1 1 1 558.30536 1115.60344 1115.60065 2.5 0.00139 0/0 0 0 9893181 HCD 30 MS2 13.20988 324.5 110 29.0451 5507 5507 5502 QEplus033719.raw F4 340 315.5 357.6 260 425.4 248.5 142 2.54 1 FALSE 0.0002518 0.005133 0.498 -250 9862 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CEYDGSHR [R].cEYDGSHR.[Y] N-Term(TMT6plex); C1(Carbamidomethyl) 2 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 A0A0R4J0I9; Q91ZX7 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 0 3 3 0.8811 0 1 1 1 418.19116 1252.55893 1252.5578 0.9 0.00038 0/0 0 0 8534242 HCD 30 MS2 34.37936 297.2 107.068 29.0476 5508 5508 5502 QEplus033719.raw F4 379 176.5 315.6 331.6 228.5 351.7 14 3.87 1 FALSE 1.14E-05 1.87E-05 0.996 -250 9867 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSQSPNTATQR [K].dSQSPNTATQR.[I] N-Term(TMT6plex) 5 Q99LG2 Transportin-2 OS=Mus musculus OX=10090 GN=Tnpo2 PE=1 SV=1 Q3U1S0; Q3U316; A0A1B0GT37; E9PV58; Q99LG2 Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Tnpo2 PE=2 SV=1; Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Tnpo2 PE=2 SV=1; Transportin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tnpo2 PE=1 SV=1; Transportin-2 OS=Mus musculus OX=10090 GN=Tnpo2 PE=1 SV=1; Transportin-2 OS=Mus musculus OX=10090 GN=Tnpo2 PE=1 SV=1 0 2 2 0.7059 0 1 1 1 717.36456 1433.72185 1433.7182 2.54 0.00182 0/0 0 0 6784779 HCD 30 MS2 8.351221 197.7 110 29.0501 5509 5509 5502 QEplus033719.raw F4 209.4 158.6 214.2 152.7 248.2 203.3 150 4.25 1 FALSE 1.14E-05 3.18E-06 1.142 -250 9880 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQTCPTCR [R].qQTcPTcR.[M] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl) 5 D3Z1Y1 RING-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Syvn1 PE=1 SV=1 D3Z1Y1; Q9DBY1-2; E9QQ99; Q9DBY1; A0A0R4J1R1 RING-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Syvn1 PE=1 SV=1; Isoform 2 of E3 ubiquitin-protein ligase synoviolin OS=Mus musculus OX=10090 GN=Syvn1; RING-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Syvn1 PE=1 SV=1; E3 ubiquitin-protein ligase synoviolin OS=Mus musculus OX=10090 GN=Syvn1 PE=1 SV=3; RING-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Syvn1 PE=1 SV=1 0 2 2 0.7138 0 1 1 1 640.30823 1279.60918 1279.60846 0.56 0.00036 0/0 0 0 2971165.75 HCD 30 MS2 6.322991 179.9 110 29.0551 5511 5511 5502 QEplus033719.raw F4 173.9 138 182.6 201.6 178.7 204.8 75 2.83 1 FALSE 3.35E-05 0.001262 0.641 -250 9885 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAAAHPDSEEQQQR [K].gAAAHPDSEEQQQR.[L] N-Term(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 3 3 0.7852 0 1 1 1 584.95343 1752.84574 1752.84625 -0.3 -0.00017 0/0 0 0 2374243.25 HCD 30 MS2 25.62123 81.9 110 29.0649 5514 5514 5513 QEplus033719.raw F4 73.7 67.7 104.2 67.9 97.8 80.2 142 4.05 1 FALSE 1.14E-05 5.80E-09 1.662 -250 9892 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HPHVANPR [K].hPHVANPR.[L] N-Term(TMT6plex) 4 A0JLQ7 Pcid2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pcid2 PE=2 SV=2 A0JLQ7; E9Q1H5; E9Q5V9; Q8BFV2 Pcid2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pcid2 PE=2 SV=2; PCI domain-containing protein 2 OS=Mus musculus OX=10090 GN=Pcid2 PE=1 SV=1; PCI domain-containing protein 2 OS=Mus musculus OX=10090 GN=Pcid2 PE=1 SV=1; PCI domain-containing protein 2 OS=Mus musculus OX=10090 GN=Pcid2 PE=1 SV=1 0 3 3 0.5486 0 1 1 1 386.22314 1156.65488 1156.65369 1.03 0.0004 0/0 0 0 4840251.5 HCD 30 MS2 15.26779 136 110 29.0674 5515 5515 5513 QEplus033719.raw F4 169.7 116.7 142 90.6 167.9 129.4 216 2.88 1 FALSE 1.14E-05 0.0002104 0.795 -250 9900 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQNYQR [K].eQNYQR.[W] N-Term(TMT6plex) 6 Q99KF1 Transmembrane emp24 domain-containing protein 9 OS=Mus musculus OX=10090 GN=Tmed9 PE=1 SV=2 Q99KF1; Q8BLM5; Q3TFU8; A0A286YDS5; Q9CZL0; Q3U7N8 Transmembrane emp24 domain-containing protein 9 OS=Mus musculus OX=10090 GN=Tmed9 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmed9 PE=2 SV=1; GOLD domain-containing protein OS=Mus musculus OX=10090 GN=Tmed9 PE=2 SV=1; Transmembrane emp24 domain-containing protein 9 OS=Mus musculus OX=10090 GN=Tmed9 PE=1 SV=1; GOLD domain-containing protein OS=Mus musculus OX=10090 GN=Tmed9 PE=2 SV=1; GOLD domain-containing protein OS=Mus musculus OX=10090 GN=Tmed9 PE=2 SV=1 0 2 2 0.4486 0 1 1 1 533.77832 1066.54936 1066.54789 1.38 0.00074 0/0 0 0 39936032 HCD 30 MS2 6.137454 485.5 31.32 29.0696 5516 5516 5513 QEplus033719.raw F4 525.7 394.2 567 473.2 513.6 439 141 2.14 1 FALSE 0.006429 0.1036 -0.003 -250 9906 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSAESDGMRR [K].nSAESDGMRR.[A] N-Term(TMT6plex) 7 Q3UE92 Xaa-Pro aminopeptidase 1 OS=Mus musculus OX=10090 GN=Xpnpep1 PE=1 SV=1 Q3UE92; Q8VDK8; Q8BKH1; A0A494BBG8; S4R1I3; Q3TL27; Q3UKF5 Xaa-Pro aminopeptidase 1 OS=Mus musculus OX=10090 GN=Xpnpep1 PE=1 SV=1; Xpnpep1 protein (Fragment) OS=Mus musculus OX=10090 GN=Xpnpep1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Xpnpep1 PE=2 SV=2; Xaa-Pro aminopeptidase 1 OS=Mus musculus OX=10090 GN=Xpnpep1 PE=1 SV=1; Xaa-Pro aminopeptidase 1 OS=Mus musculus OX=10090 GN=Xpnpep1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Xpnpep1 PE=2 SV=1; X-prolyl aminopeptidase OS=Mus musculus OX=10090 GN=Xpnpep1 PE=2 SV=1 1 3 3 0.5324 0 1 1 1 451.22473 1351.65964 1351.65858 0.79 0.00035 0/0 0 0 17367214 HCD 30 MS2 5.288837 367 76.792 29.0719 5517 5517 5513 QEplus033719.raw F4 417 253.3 355.6 366.5 433.3 376.5 121 3.7 1 FALSE 1.14E-05 2.96E-08 1.528 -250 9912 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPEGERPAR [K].gPEGERPAR.[F] N-Term(TMT6plex) 5 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" P63325; Q3UW83; A0A338P7K4; Q3U9P0; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; S10_plectin domain-containing protein OS=Mus musculus OX=10090 GN=Rps10 PE=2 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 0 3 3 0.4786 0 1 1 1 399.88968 1197.65448 1197.65375 0.61 0.00024 0/0 0 0 16254021 HCD 30 MS2 31.18122 641.9 59.185 29.0741 5518 5518 5513 QEplus033719.raw F4 1083.7 412.3 572.3 485.4 695.1 602.4 214 3.51 2 FALSE 1.14E-05 4.46E-05 0.924 -250 9953 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNPEGAEDR [R].sNPEGAEDR.[A] N-Term(TMT6plex) 1 Q3UI43 BRISC and BRCA1-A complex member 1 OS=Mus musculus OX=10090 GN=Babam1 PE=1 SV=1 Q3UI43 BRISC and BRCA1-A complex member 1 OS=Mus musculus OX=10090 GN=Babam1 PE=1 SV=1 0 2 2 0.6074 0 1 1 1 602.29388 1203.58049 1203.58031 0.15 0.00009 0/0 0 0 2722767 HCD 30 MS2 6.954375 228.5 110 29.0864 5523 5523 5513 QEplus033719.raw F4 246.2 193.4 249.1 200.8 297.7 183.9 46 3.77 1 FALSE 1.14E-05 9.35E-07 1.243 -250 9986 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSREEVER [R].dSREEVER.[R] N-Term(TMT6plex) 2 P36916 Guanine nucleotide-binding protein-like 1 OS=Mus musculus OX=10090 GN=Gnl1 PE=1 SV=4 P36916; A2VDH5 Guanine nucleotide-binding protein-like 1 OS=Mus musculus OX=10090 GN=Gnl1 PE=1 SV=4; Gnal1 protein (Fragment) OS=Mus musculus OX=10090 GN=Gnl1 PE=2 SV=1 1 3 3 0.4031 0 1 1 1 416.88419 1248.638 1248.63816 -0.12 -0.00005 0/0 0 0 13360900 HCD 30 MS2 47.21505 514.3 58.511 29.1029 5529 5529 5524 QEplus033719.raw F4 853.9 366.8 492.1 309.5 538.8 524.8 170 2.58 1 FALSE 0.000565 0.008694 0.427 -250 9992 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESQQQHGLR [K].eSQQQHGLR.[H] N-Term(TMT6plex) 2 Q8BMA6 Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=2 Q8BMA6; A2AAN2 Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=2; Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=1 0 3 3 0.641 0 1 1 1 437.90372 1311.6966 1311.69668 -0.06 -0.00003 0/0 0 0 11067565 HCD 30 MS2 25.69327 348.3 76.221 29.1052 5530 5530 5524 QEplus033719.raw F4 425.3 307.4 318.5 305.5 507.8 225.2 236 4.54 1 FALSE 1.14E-05 6.99E-06 1.077 -250 9996 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TASDQATTAR [K].tASDQATTAR.[I] N-Term(TMT6plex) 9 Q3UUT0 Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus OX=10090 GN=Eif4e2 PE=1 SV=1 Q3UUT0; G3X9H1; Q8BMB3; Q0P688; D3Z729; D3YUV9; D3Z730; Q9D334; Q80ZJ3 Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus OX=10090 GN=Eif4e2 PE=1 SV=1; Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus OX=10090 GN=Eif4e2 PE=1 SV=1; Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus OX=10090 GN=Eif4e2 PE=1 SV=1; Eukaryotic translation initiation factor 4E member 2 OS=Mus musculus OX=10090 GN=Eif4e2 PE=1 SV=1; Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus OX=10090 GN=Eif4e2 PE=1 SV=1; Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus OX=10090 GN=Eif4e2 PE=1 SV=1; Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus OX=10090 GN=Eif4e2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Eif4e2 PE=2 SV=1; Eif4e2 protein OS=Mus musculus OX=10090 GN=Eif4e2 PE=1 SV=1 0 2 2 0.5587 0 1 1 1 625.83118 1250.65508 1250.65381 1.01 0.00063 0/0 0 0 5901167.5 HCD 30 MS2 12.78824 294.8 110 29.1077 5531 5531 5524 QEplus033719.raw F4 308.2 240.2 304.5 257.6 388.1 270.1 240 3.49 1 FALSE 1.14E-05 5.61E-06 1.095 -250 10005 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPEGERPAR [K].gPEGERPAR.[F] N-Term(TMT6plex) 5 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" P63325; Q3UW83; A0A338P7K4; Q3U9P0; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; S10_plectin domain-containing protein OS=Mus musculus OX=10090 GN=Rps10 PE=2 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 0 2 2 0.601 0 1 1 1 599.33093 1197.65459 1197.65375 0.7 0.00042 0/0 0 0 3707072 HCD 30 MS2 14.62107 292 110 29.1102 5532 5532 5524 QEplus033719.raw F4 295.4 231.5 286.3 258.4 369.2 311.1 201 2.03 2 FALSE 0.00131 0.01784 0.301 -250 10016 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVQTAEERER [K].rVQTAEERER.[E] N-Term(TMT6plex) 4 Q8BGW1 Alpha-ketoglutarate-dependent dioxygenase FTO OS=Mus musculus OX=10090 GN=Fto PE=1 SV=1 Q8BGW1; Q8BGW1-4; Q8BGW1-3; Q8BGW1-2 Alpha-ketoglutarate-dependent dioxygenase FTO OS=Mus musculus OX=10090 GN=Fto PE=1 SV=1; Isoform 4 of Alpha-ketoglutarate-dependent dioxygenase FTO OS=Mus musculus OX=10090 GN=Fto; Isoform 3 of Alpha-ketoglutarate-dependent dioxygenase FTO OS=Mus musculus OX=10090 GN=Fto; Isoform 2 of Alpha-ketoglutarate-dependent dioxygenase FTO OS=Mus musculus OX=10090 GN=Fto 2 4 4 0.538 0 1 1 1 376.46133 1502.82351 1502.82367 -0.11 -0.00004 0/0 0 0 2817976.75 HCD 30 MS2 41.66796 225.9 110 29.1152 5534 5534 5524 QEplus033719.raw F4 312.6 168.5 246.7 175.7 209.1 242.9 333 3.16 1 FALSE 1.14E-05 0.0002168 0.793 -250 10022 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAGGSQER [K].vAGGSQER.[S] N-Term(TMT6plex) 4 Q80TM9 Nischarin OS=Mus musculus OX=10090 GN=Nisch PE=1 SV=2 Q80TM9-3; B7ZN33; Q80TM9-2; Q80TM9 Isoform 3 of Nischarin OS=Mus musculus OX=10090 GN=Nisch; Nisch protein (Fragment) OS=Mus musculus OX=10090 GN=Nisch PE=2 SV=1; Isoform 2 of Nischarin OS=Mus musculus OX=10090 GN=Nisch; Nischarin OS=Mus musculus OX=10090 GN=Nisch PE=1 SV=2 0 2 2 0.0417 2 2 2 516.78638 1032.56548 1032.56354 1.88 0.00097 0/0 0 0 1787849.875 HCD 30 MS2 21.7074 148.7 110 29.125 5537 5537 5535 QEplus033719.raw F4 295.4 78.2 162.4 93 96.6 166.7 263 2.07 1 FALSE 0.003472 0.06739 0.094 -250 10031 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRNDAIR [R].sRNDAIR.[LVI] N-Term(TMT6plex) 4 Q5SX40 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1 Q9ESW6; Q5SX40; G3UW82; B2RWX0 "Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1" 1 3 3 0.4752 0 1 1 1 354.20721 1060.60709 1060.60607 0.96 0.00034 0/0 0 0 5245339.5 HCD 30 MS2 15.07233 307.6 110 29.1347 5541 5541 5535 QEplus033719.raw F4 499 45.9 145.4 770 61.6 323.7 275 3.43 1 FALSE 1.14E-05 0.0008443 0.677 -250 10032 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRNDALR [R].sRNDALR.[LVI] N-Term(TMT6plex) 5 Q5SX39; P13542 Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q5SX39; B1AR69; P13542; Q9JHR4 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2; Myosin heavy chain IIB (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1" 1 3 3 0.4752 0 1 2 2 354.20721 1060.60709 1060.60607 0.96 0.00034 0/0 0 0 5245339.5 HCD 30 MS2 15.07233 307.6 110 29.1347 5541 5541 5535 QEplus033719.raw F4 499 45.9 145.4 770 61.6 323.7 275 3.43 2 FALSE 1.14E-05 0.0008443 0.677 -250 10037 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSEDVR [K].dSEDVR.[V] N-Term(TMT6plex) 6 G3X9Q6 La-related protein 4 OS=Mus musculus OX=10090 GN=Larp4 PE=1 SV=1 G3X9Q6; A0A2R8W6Y5; Q3UT02; Q8BWW4; A0A2R8VKL5; E9Q066 La-related protein 4 OS=Mus musculus OX=10090 GN=Larp4 PE=1 SV=1; La-related protein 4 OS=Mus musculus OX=10090 GN=Larp4 PE=1 SV=1; HTH La-type RNA-binding domain-containing protein OS=Mus musculus OX=10090 GN=Larp4 PE=2 SV=1; La-related protein 4 OS=Mus musculus OX=10090 GN=Larp4 PE=1 SV=2; La-related protein 4 OS=Mus musculus OX=10090 GN=Larp4 PE=1 SV=1; La-related protein 4 OS=Mus musculus OX=10090 GN=Larp4 PE=1 SV=1 0 2 2 0.2153 0 1 1 1 475.2438 949.48033 949.47881 1.61 0.00076 0/0 0 0 3668501.25 HCD 30 MS2 15.78472 289.3 110 29.1372 5542 5542 5535 QEplus033719.raw F4 460 192.8 380.2 168.4 241.1 293.2 77 2.09 1 FALSE 0.003988 0.07395 0.077 -250 10044 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQMPDNR [R].rQMPDNR.[V] N-Term(TMT6plex) 7 E9Q1G8 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2 E9Q1G8; Q8C2A3; E9Q9F5; Q5DTS3; Q3UNN1; O55131; Q3UGE0 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin-7 (Fragment) OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin-7 OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=1; Septin-type G domain-containing protein OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1 1 3 3 0.425 0 1 1 1 382.54019 1145.60602 1145.60469 1.16 0.00044 0/0 0 0 3646422.25 HCD 30 MS2 24.0337 177 110 29.1397 5543 5543 5535 QEplus033719.raw F4 246.6 112.5 192.6 151.1 184.9 174.5 173 2.8 1 FALSE 5.44E-05 0.00176 0.611 -250 10052 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASGGPGGGPR [K].aSGGPGGGPR.[L] N-Term(TMT6plex) 1 Q9ER73 Elongator complex protein 4 OS=Mus musculus OX=10090 GN=Elp4 PE=1 SV=2 Q9ER73 Elongator complex protein 4 OS=Mus musculus OX=10090 GN=Elp4 PE=1 SV=2 0 2 2 0.5738 0 1 1 1 521.28583 1041.56438 1041.56387 0.49 0.00025 0/0 0 0 3113072.75 HCD 30 MS2 25.62874 242.3 110 29.1422 5544 5544 5535 QEplus033719.raw F4 288.2 203.8 263.2 194.5 283.6 220.5 111 3.05 1 FALSE 1.14E-05 1.18E-05 1.034 -250 10060 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QESEQGPCR [R].qESEQGPcR.[R] N-Term(TMT6plex); C8(Carbamidomethyl) 2 Q3UQV0 Insulin-like growth factor-binding protein 5 OS=Mus musculus OX=10090 GN=Igfbp5 PE=1 SV=1 Q3TT49; Q3UQV0 Thyroglobulin type-1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Igfbp5 PE=2 SV=1; Insulin-like growth factor-binding protein 5 OS=Mus musculus OX=10090 GN=Igfbp5 PE=1 SV=1 0 2 2 0.7025 0 1 1 1 660.31488 1319.62248 1319.62113 1.03 0.00068 0/0 0 0 2454105 HCD 30 MS2 0 173.7 110 29.1447 5545 5545 5535 QEplus033719.raw F4 230 62.3 88.6 311.3 161.5 188.5 58 2.79 1 FALSE 5.44E-05 0.002475 0.578 -250 10066 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPDDPSR [K].sPDDPSR.[Y] N-Term(TMT6plex) 2 Q5FW97 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1 Q5FW97; Q6PHC1 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 0 2 2 0.6633 0 1 1 1 501.75687 1002.50646 1002.50535 1.1 0.00055 0/0 0 0 12062966 HCD 30 MS2 29.08887 430.7 110 29.152 5547 5547 5546 QEplus033719.raw F4 629.5 316.4 494.6 322 407.3 414.6 42 1.96 1 FALSE 0.005197 0.08889 0.037 -250 10068 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQQQAEAER [R].aQQQAEAER.[A] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.6016 0 1 1 1 630.33124 1259.6552 1259.65414 0.84 0.00053 0/0 0 0 5716054.5 HCD 30 MS2 0 270.4 110 29.1546 5548 5548 5546 QEplus033719.raw F4 353.5 202.1 289.1 250.8 281.2 245.9 164 3.79 2 FALSE 1.14E-05 5.71E-07 1.284 -250 10080 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIRDNER [K].gIRDNER.[S] N-Term(TMT6plex) 8 A0A0J9YUQ8; P13020-2; Q3SX14 Actin-depolymerizing factor (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1;Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn;TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin A6PWS5; Q3UCW8; Q3U9Q8; A0A0J9YUQ8; P13020-2; Q3TGJ9; P13020; Q3SX14 Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1; Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Gelsolin OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=3; TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin 1 3 3 0.3739 0 1 1 1 363.53867 1088.60144 1088.60099 0.42 0.00015 0/0 0 0 14889722 HCD 30 MS2 28.18948 578.5 67.529 29.1591 5550 5550 5546 QEplus033719.raw F4 701.4 450.9 681.3 487.6 538 611.8 238 2.38 3 TRUE 0.009084 0.1652 -0.103 -250 10111 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAAGACPR [R].sAAGAcPR.[S] N-Term(TMT6plex); C6(Carbamidomethyl) 4 Q496S6 Aven protein OS=Mus musculus OX=10090 GN=Aven PE=2 SV=1 Q496S6; Q496R6; A2AGL5; Q9D9K3 Aven protein OS=Mus musculus OX=10090 GN=Aven PE=2 SV=1; Aven protein (Fragment) OS=Mus musculus OX=10090 GN=Aven PE=2 SV=1; Cell death regulator Aven OS=Mus musculus OX=10090 GN=Aven PE=1 SV=1; Cell death regulator Aven OS=Mus musculus OX=10090 GN=Aven PE=1 SV=2 0 2 2 0.3825 0 1 1 1 509.76776 1018.52825 1018.53013 -1.85 -0.00094 0/0 0 0 2109730 HCD 30 MS2 31.66837 343.5 110 29.1716 5555 5555 5546 QEplus033719.raw F4 539.3 269.1 388.7 270.3 269.8 323.8 218 2.17 1 FALSE 0.001301 0.01775 0.302 -250 10120 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDMEQNDSDNRR [R].gDMEQNDSDNRR.[I] N-Term(TMT6plex) 4 P97379 Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2 PE=1 SV=2 P97379; P97379-2; Q3U931; Q3U6B1 Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2 PE=1 SV=2; Isoform B of Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2; Uncharacterized protein OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1 1 3 3 0.7558 0 1 1 1 555.92017 1665.74594 1665.74483 0.67 0.00037 0/0 0 0 1838000.75 HCD 30 MS2 30.31215 208.3 110 29.1741 5556 5556 5546 QEplus033719.raw F4 235.9 175.7 220.2 167.3 251.3 199.5 22 3.85 1 FALSE 1.14E-05 1.69E-10 1.954 -250 10128 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSSGAGGPATCSR [R].gSSGAGGPATcSR.[C] N-Term(TMT6plex); C11(Carbamidomethyl) 3 Q60669 Receptor protein-tyrosine kinase (Fragment) OS=Mus musculus OX=10090 GN=Ephb3 PE=2 SV=1 Q60669; E0CYA3; P54754 Receptor protein-tyrosine kinase (Fragment) OS=Mus musculus OX=10090 GN=Ephb3 PE=2 SV=1; Receptor protein-tyrosine kinase OS=Mus musculus OX=10090 GN=Ephb3 PE=1 SV=2; Ephrin type-B receptor 3 OS=Mus musculus OX=10090 GN=Ephb3 PE=1 SV=2 0 2 2 0.6826 0 1 1 1 697.33917 1393.67107 1393.66914 1.38 0.00096 0/0 0 0 2820853.5 HCD 30 MS2 0 101.5 110 29.1814 5558 5558 5557 QEplus033719.raw F4 89.3 84.8 114.8 105.4 87.7 127.1 109 4.19 1 FALSE 1.14E-05 3.26E-13 2.469 -250 10135 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGDQGYGSGR [R].gGGDQGYGSGR.[Y] N-Term(TMT6plex) 3 Q8BG13; O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1;RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 Q8BG13; O89086; Q5RJV3 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1; RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1; Rbm3 protein OS=Mus musculus OX=10090 GN=Rbm3 PE=2 SV=1 0 2 2 0.737 0 1 1 1 620.30103 1239.59477 1239.59154 2.61 0.00162 0/0 0 0 1235545 HCD 30 MS2 0 62 110 29.1839 5559 5559 5557 QEplus033719.raw F4 61.5 44.6 71.3 35.3 96.4 62.6 75 2.89 2 FALSE 1.14E-05 8.82E-08 1.438 -250 10141 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDDTADRDNPSTCRR [K].nDDTADRDNPSTcRR.[A] N-Term(TMT6plex); C13(Carbamidomethyl) 3 Q3TW96 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus OX=10090 GN=Uap1l1 PE=1 SV=1 Q3TW96; Q3TW96-2; Q8BVK3 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus OX=10090 GN=Uap1l1 PE=1 SV=1; Isoform 2 of UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus OX=10090 GN=Uap1l1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Uap1l1 PE=2 SV=1 2 4 4 0.7769 0 1 1 1 506.23758 2021.92849 2021.92564 1.41 0.00071 0/0 0 0 14308465 HCD 30 MS2 16.53146 243.8 82.257 29.1862 5560 5560 5557 QEplus033719.raw F4 252.7 184.5 330 251.5 159.4 284.8 52 5.2 1 FALSE 1.14E-05 5.71E-07 1.284 -250 10148 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLRNDEHTRR [K].dLRNDEHTRR.[E] N-Term(TMT6plex) 3 Q9QUI0 Transforming protein RhoA OS=Mus musculus OX=10090 GN=Rhoa PE=1 SV=1 Q9QUI0; Q3TN61; A0A0A6YXF6 Transforming protein RhoA OS=Mus musculus OX=10090 GN=Rhoa PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rhoa PE=2 SV=1; Transforming protein RhoA (Fragment) OS=Mus musculus OX=10090 GN=Rhoa PE=1 SV=1 2 4 4 0.413 0 1 1 1 385.95953 1540.8163 1540.81417 1.39 0.00053 0/0 0 0 11435347 HCD 30 MS2 28.83256 259.1 70.043 29.1884 5561 5561 5557 QEplus033719.raw F4 309.1 264.5 293.8 158 299.9 229.1 300 2.76 1 FALSE 0.0001504 0.003376 0.546 -250 10156 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIRDNER [K].gIRDNER.[S] N-Term(TMT6plex) 8 A0A0J9YUQ8; P13020-2; Q3SX14 Actin-depolymerizing factor (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1;Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn;TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin A6PWS5; Q3UCW8; Q3U9Q8; A0A0J9YUQ8; P13020-2; Q3TGJ9; P13020; Q3SX14 Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1; Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Gelsolin OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=3; TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin 1 2 2 0.3579 0 1 1 1 544.80481 1088.60234 1088.60099 1.25 0.00068 0/0 0 0 6410502 HCD 30 MS2 0 233.8 110 29.1909 5562 5562 5557 QEplus033719.raw F4 308.2 175.4 261.8 236.9 236.9 183.9 258 1.9 3 TRUE 0.003651 0.06972 0.088 -250 10173 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVDECQHSR [R].dVDEcQHSR.[C] N-Term(TMT6plex); C5(Carbamidomethyl) 1 P10493 Nidogen-1 OS=Mus musculus OX=10090 GN=Nid1 PE=1 SV=2 P10493 Nidogen-1 OS=Mus musculus OX=10090 GN=Nid1 PE=1 SV=2 0 3 3 0.8235 0 1 1 1 458.88068 1374.62748 1374.62694 0.39 0.00018 0/0 0 0 4884323.5 HCD 30 MS2 52.17938 444.8 110 29.1959 5564 5564 5557 QEplus033719.raw F4 1106.3 199.4 323.8 439.3 318.9 280.9 23 3.74 1 FALSE 1.14E-05 0.0001232 0.84 -250 10185 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLRNDEHTRR [K].dLRNDEHTRR.[E] N-Term(TMT6plex) 3 Q9QUI0 Transforming protein RhoA OS=Mus musculus OX=10090 GN=Rhoa PE=1 SV=1 Q9QUI0; Q3TN61; A0A0A6YXF6 Transforming protein RhoA OS=Mus musculus OX=10090 GN=Rhoa PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rhoa PE=2 SV=1; Transforming protein RhoA (Fragment) OS=Mus musculus OX=10090 GN=Rhoa PE=1 SV=1 2 3 3 0.5685 0 1 1 1 514.27698 1540.81638 1540.81417 1.44 0.00074 0/0 0 0 4138420 HCD 30 MS2 10.65228 154.5 110 29.2009 5566 5566 5557 QEplus033719.raw F4 164.6 159.8 172 100.3 197.5 132.8 300 3.94 1 FALSE 1.14E-05 3.22E-05 0.951 -250 10196 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDDTADRDNPSTCRR [K].nDDTADRDNPSTcRR.[A] N-Term(TMT6plex); C13(Carbamidomethyl) 3 Q3TW96 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus OX=10090 GN=Uap1l1 PE=1 SV=1 Q3TW96; Q3TW96-2; Q8BVK3 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus OX=10090 GN=Uap1l1 PE=1 SV=1; Isoform 2 of UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus OX=10090 GN=Uap1l1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Uap1l1 PE=2 SV=1 2 3 3 0.7518 0 1 1 1 674.64734 2021.92746 2021.92564 0.9 0.00061 0/0 0 0 3199686.5 HCD 30 MS2 0 57.8 110 29.2107 5569 5569 5568 QEplus033719.raw F4 54 50.4 78.1 60.2 38.2 65.7 49 4.27 1 FALSE 1.14E-05 1.42E-06 1.208 -250 10215 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THLENNR [K].tHLENNR.[F] N-Term(TMT6plex) 8 Q3TWL6 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1 Q3TI61; Q3TWL6; Q3TW71; Q3U9Y8; Q3TIP0; Q8VDM4; Q3TXV1; Q80V77 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1 0 3 3 0.6317 0 1 1 1 371.53918 1112.603 1112.60099 1.81 0.00067 0/0 0 0 14497682 HCD 30 MS2 19.19251 214.5 70.995 29.2222 5574 5574 5568 QEplus033719.raw F4 398.8 103.7 214.7 229.8 137 202.9 159 3.72 1 FALSE 1.14E-05 0.0001329 0.833 -250 10230 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVQDESQR [R].qVQDESQR.[K] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5425 0 1 1 1 609.81793 1218.62859 1218.62759 0.81 0.0005 0/0 0 0 4665787.5 HCD 30 MS2 0 347.5 110 29.2295 5577 5577 5568 QEplus033719.raw F4 446.6 316.5 362.1 331.9 333 294.6 162 3.06 2 FALSE 1.14E-05 0.0008376 0.678 -250 10249 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRNDAIR [R].sRNDAIR.[LVI] N-Term(TMT6plex) 4 Q5SX40 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1 Q9ESW6; Q5SX40; G3UW82; B2RWX0 "Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1" 1 2 2 0.2775 0 1 1 1 530.80731 1060.60735 1060.60607 1.2 0.00064 0/0 0 0 9841419 HCD 30 MS2 7.324503 207.9 110 29.2485 5584 5584 5579 QEplus033719.raw F4 304.6 53.7 105.6 512.3 73.2 198.2 294 1.91 1 FALSE 0.001387 0.01967 0.284 -250 10250 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRNDALR [R].sRNDALR.[LVI] N-Term(TMT6plex) 5 Q5SX39; P13542 Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q5SX39; B1AR69; P13542; Q9JHR4 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2; Myosin heavy chain IIB (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1" 1 2 2 0.2775 0 1 2 2 530.80731 1060.60735 1060.60607 1.2 0.00064 0/0 0 0 9841419 HCD 30 MS2 7.324503 207.9 110 29.2485 5584 5584 5579 QEplus033719.raw F4 304.6 53.7 105.6 512.3 73.2 198.2 294 1.91 2 FALSE 0.001387 0.01967 0.284 -250 10255 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSTTVSSGGR [R].gSTTVSSGGR.[F] N-Term(TMT6plex) 4 Q9ERP3 Tripartite motif-containing protein 54 OS=Mus musculus OX=10090 GN=Trim54 PE=1 SV=1 Q3KNI7; Q9ERP3; Q3KNI8; E9QAT9 Trim54 protein OS=Mus musculus OX=10090 GN=Trim54 PE=2 SV=1; Tripartite motif-containing protein 54 OS=Mus musculus OX=10090 GN=Trim54 PE=1 SV=1; Trim54 protein OS=Mus musculus OX=10090 GN=Trim54 PE=2 SV=1; Tripartite motif-containing protein 54 OS=Mus musculus OX=10090 GN=Trim54 PE=1 SV=1 0 2 2 0.6269 0 1 1 1 569.30731 1137.60735 1137.60613 1.07 0.00061 0/0 0 0 6232350 HCD 30 MS2 4.000536 270.6 110 29.251 5585 5585 5579 QEplus033719.raw F4 426.5 73.4 316 374 79.5 354 185 3.27 1 FALSE 1.14E-05 4.14E-08 1.5 -250 10263 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCQVENGR [K].scQVENGR.[V] N-Term(TMT6plex); C2(Carbamidomethyl) 14 Q8CAQ1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Mbnl1 PE=2 SV=1 A0A0A6YWB0; A0A0A6YXP3; Q8C181; Q8C181-3; Q8CAQ1; Q8CHF5; D0EX61; A0A2K6EDM5; A0A0A6YXE3; Q9JKP5; G3X9Q0; A0A0A6YVV8; Q8C181-2; Q8C181-4 Muscleblind-like protein 1 OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1; Muscleblind-like protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1; Muscleblind-like protein 2 OS=Mus musculus OX=10090 GN=Mbnl2 PE=2 SV=2; Isoform 3 of Muscleblind-like protein 2 OS=Mus musculus OX=10090 GN=Mbnl2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mbnl1 PE=2 SV=1; MKIAA0428 protein (Fragment) OS=Mus musculus OX=10090 GN=Mbnl1 PE=2 SV=1; Muscleblind-like 2 isoform 3 OS=Mus musculus OX=10090 GN=Mbnl2 PE=2 SV=1; Muscleblind-like protein 2 OS=Mus musculus OX=10090 GN=Mbnl2 PE=1 SV=1; Muscleblind-like protein 1 OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1; Muscleblind-like protein 1 OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1; Muscleblind-like protein 1 OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1; Muscleblind-like protein 1 OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1; Isoform 2 of Muscleblind-like protein 2 OS=Mus musculus OX=10090 GN=Mbnl2; Isoform 4 of Muscleblind-like protein 2 OS=Mus musculus OX=10090 GN=Mbnl2 0 2 2 0.5483 0 1 1 1 589.79364 1178.58 1178.57854 1.24 0.00073 0/0 0 0 5046970 HCD 30 MS2 4.27666 336.1 110 29.2536 5586 5586 5579 QEplus033719.raw F4 426.6 290.8 327.9 276.2 438.4 256.5 79 2.9 1 FALSE 0.0003996 0.007039 0.457 -250 10270 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQGNDSASTAPR [R].dQGNDSASTAPR.[S] N-Term(TMT6plex) 8 E9Q0A7 Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=1 Q8C715; Q4KMM3-2; Q4KMM3-4; A0A2R8VI09; Q4KMM3-3; E9Q0A7; A0A2R8W6N3; Q4KMM3 LysM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Oxr1 PE=2 SV=2; Isoform 2 of Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1; Isoform 4 of Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1; Oxidation resistance protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=1; Isoform 3 of Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1; Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=1; Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=1; Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=3 0 2 2 0.8376 0 1 1 1 724.35309 1447.6989 1447.69747 0.99 0.00072 0/0 0 0 4197465.5 HCD 30 MS2 0 150.7 110 29.2586 5588 5588 5579 QEplus033719.raw F4 140.5 142.8 172.4 140.8 148.1 159.7 89 4.74 1 FALSE 1.14E-05 3.22E-11 2.091 -250 10278 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQSPASSEEQR [R].gQSPASSEEQR.[R] N-Term(TMT6plex) 2 Q6P6I6 DNA-directed RNA polymerase II subunit GRINL1A OS=Mus musculus OX=10090 GN=Polr2m PE=2 SV=2 Q6P6I6; Q6P6I6-2 DNA-directed RNA polymerase II subunit GRINL1A OS=Mus musculus OX=10090 GN=Polr2m PE=2 SV=2; Isoform 2 of DNA-directed RNA polymerase II subunit GRINL1A OS=Mus musculus OX=10090 GN=Polr2m 0 2 2 0.526 0 1 1 1 702.85107 1404.69487 1404.69165 2.29 0.00161 0/0 0 0 1172900.125 HCD 30 MS2 0 57.4 110 29.2684 5591 5591 5590 QEplus033719.raw F4 54.5 50.7 65.9 47.5 67.8 57.7 110 3.08 1 FALSE 1.14E-05 4.21E-07 1.309 -250 10292 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EREVEER [R].eREVEER.[L] N-Term(TMT6plex) 8 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 3 3 0.2684 0 1 1 1 392.54602 1175.62351 1175.62178 1.47 0.00058 0/0 0 0 33781136 HCD 30 MS2 37.97086 452.5 31.71 29.2731 5593 5593 5590 QEplus033719.raw F4 785.6 303.7 470.4 378.8 346.7 429.9 228 2.72 1 FALSE 0.001142 0.01537 0.328 -250 10297 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTQRPGEPEEGAR [K].hTQRPGEPEEGAR.[H] N-Term(TMT6plex) 2 P35569 Insulin receptor substrate 1 OS=Mus musculus OX=10090 GN=Irs1 PE=1 SV=1 P35569; Q543V3 Insulin receptor substrate 1 OS=Mus musculus OX=10090 GN=Irs1 PE=1 SV=1; Insulin receptor substrate 1 OS=Mus musculus OX=10090 GN=Irs1 PE=1 SV=1 0 4 4 0.3934 0 1 1 1 423.97101 1692.8622 1692.86151 0.41 0.00017 0/0 0 0 11273823 HCD 30 MS2 48.94628 426.4 81.516 29.2754 5594 5594 5590 QEplus033719.raw F4 681.3 236.3 545.8 251.2 470.7 372.9 239 3.05 1 FALSE 1.14E-05 1.14E-05 1.037 -250 10321 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVDECQHSR [R].dVDEcQHSR.[C] N-Term(TMT6plex); C5(Carbamidomethyl) 1 P10493 Nidogen-1 OS=Mus musculus OX=10090 GN=Nid1 PE=1 SV=2 P10493 Nidogen-1 OS=Mus musculus OX=10090 GN=Nid1 PE=1 SV=2 0 2 2 0.8065 0 1 1 1 687.81952 1374.63176 1374.62694 3.51 0.00241 0/0 0 0 1366900.25 HCD 30 MS2 0 71.2 110 29.2854 5598 5598 5590 QEplus033719.raw F4 79.2 56.9 84.1 66.2 71.5 69.6 19 2.48 1 FALSE 0.0001401 0.003194 0.552 -250 10324 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDMEQNDSDNRR [R].gDMEQNDSDNRR.[I] N-Term(TMT6plex) 4 P97379 Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2 PE=1 SV=2 P97379; P97379-2; Q3U931; Q3U6B1 Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2 PE=1 SV=2; Isoform B of Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2; Uncharacterized protein OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1 1 2 2 0.6533 0 1 1 1 833.37775 1665.74822 1665.74483 2.04 0.0017 0/0 0 0 966113 HCD 30 MS2 0 33.4 110 29.2879 5599 5599 5590 QEplus033719.raw F4 32.7 29.5 28.3 22.4 48.5 39.1 25 3.23 1 FALSE 1.14E-05 1.67E-08 1.575 -250 10333 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRNEAIR [R].sRNEAIR.[VL] N-Term(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 2 2 0.3054 0 1 1 1 537.8161 1074.62493 1074.62172 2.98 0.0016 0/0 0 0 3641223.25 HCD 30 MS2 49.92191 177.8 110 29.2904 5600 5600 5590 QEplus033719.raw F4 280.3 87.7 140.8 263.1 124.1 171.1 329 2.03 1 FALSE 0.003708 0.07076 0.086 -250 10334 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRNEALR [R].sRNEALR.[VL] N-Term(TMT6plex) 4 B2RY26 Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1 Q2TAW4; B2RQQ1; B2RY26; B2RXX9 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1" 1 2 2 0.3054 0 1 2 2 537.8161 1074.62493 1074.62172 2.98 0.0016 0/0 0 0 3641223.25 HCD 30 MS2 49.92191 177.8 110 29.2904 5600 5600 5590 QEplus033719.raw F4 280.3 87.7 140.8 263.1 124.1 171.1 329 2.03 1 FALSE 0.003708 0.07076 0.086 -250 10376 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLSQSQER [K].rLSQSQER.[L] N-Term(TMT6plex) 8 Q7M739 Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1 Q32P08; Q05CS8; Q7M739; F6ZDS4; Q3V1L5; Q8BK71; Q3TZB5; Q8BU18 Tpr protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Tpr protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1 1 3 3 0.6319 0 1 1 1 411.56885 1232.69199 1232.69086 0.91 0.00038 0/0 0 0 4844194.5 HCD 30 MS2 28.9093 293.2 110 29.3102 5607 5607 5601 QEplus033719.raw F4 412.2 155 367.1 260.4 305.7 258.7 350 3.45 1 FALSE 1.14E-05 5.19E-06 1.102 -250 10381 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRQEEQGAQVQR [K].sRQEEQGAQVQR.[L] N-Term(TMT6plex) 3 E9Q7U2 Calcium-binding and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=Calcoco1 PE=1 SV=1 E9Q7U2; A0A2R8VHU8; Q8CGU1 Calcium-binding and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=Calcoco1 PE=1 SV=1; Calcium-binding and coiled-coil domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Calcoco1 PE=1 SV=1; Calcium-binding and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=Calcoco1 PE=1 SV=2 1 3 3 0.6981 0 1 1 1 548.95959 1644.86423 1644.86151 1.65 0.00091 0/0 0 0 3924983.25 HCD 30 MS2 6.7324 129.7 110 29.3127 5608 5608 5601 QEplus033719.raw F4 134.5 97.9 157 119.3 122.8 146.4 255 5.93 1 FALSE 1.14E-05 1.06E-13 2.562 -250 10387 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CACHVCGGR [K].cAcHVcGGR.[E] N-Term(TMT6plex); C1(Carbamidomethyl); C3(Carbamidomethyl); C6(Carbamidomethyl) 2 Q8VDF2 E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus OX=10090 GN=Uhrf1 PE=1 SV=2 Q8VDF2-2; Q8VDF2 Isoform 2 of E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus OX=10090 GN=Uhrf1; E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus OX=10090 GN=Uhrf1 PE=1 SV=2 0 3 3 0.7855 0 1 1 1 435.86511 1305.58078 1305.5812 -0.32 -0.00014 0/0 0 0 2374460.75 HCD 30 MS2 17.30317 131.7 110 29.3152 5609 5609 5601 QEplus033719.raw F4 182.7 81 119.9 90.3 169.2 146.8 14 3.87 1 FALSE 1.14E-05 0.0003788 0.746 -250 10394 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CSDEERPSTSR [R].cSDEERPSTSR.[A] N-Term(TMT6plex); C1(Carbamidomethyl) 2 Q8BM64 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fbxo38 PE=2 SV=1 Q8BM64; Q8BMI0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fbxo38 PE=2 SV=1; F-box only protein 38 OS=Mus musculus OX=10090 GN=Fbxo38 PE=1 SV=1 0 3 3 0.6199 0 1 1 1 518.2467 1552.72556 1552.7223 2.1 0.00109 0/0 0 0 1246962.375 HCD 30 MS2 0 99.3 110 29.3177 5610 5610 5601 QEplus033719.raw F4 123 89.9 97.9 74.2 110.1 101 45 3.42 1 FALSE 1.14E-05 4.11E-05 0.931 -250 10399 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLSQSQER [K].rLSQSQER.[L] N-Term(TMT6plex) 8 Q7M739 Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1 Q32P08; Q05CS8; Q7M739; F6ZDS4; Q3V1L5; Q8BK71; Q3TZB5; Q8BU18 Tpr protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Tpr protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1 1 2 2 0.2788 0 1 1 1 616.85022 1232.69316 1232.69086 1.87 0.00115 0/0 0 0 1002015.313 HCD 30 MS2 0 68 110 29.3202 5611 5611 5601 QEplus033719.raw F4 85.1 58.8 72.2 56.4 72.6 62.7 377 2.08 1 FALSE 0.002225 0.04298 0.164 -250 10407 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRDPEEGGDPGGR [R].sRDPEEGGDPGGR.[A] N-Term(TMT6plex) 2 Q61193 Ral guanine nucleotide dissociation stimulator-like 2 OS=Mus musculus OX=10090 GN=Rgl2 PE=1 SV=2 Q61193; A0A068BD34 Ral guanine nucleotide dissociation stimulator-like 2 OS=Mus musculus OX=10090 GN=Rgl2 PE=1 SV=2; Ral guanine nucleotide dissociation stimulator-like 2 OS=Mus musculus OX=10090 GN=Rgl2 PE=2 SV=1 1 3 3 0.7107 0 1 1 1 519.92126 1557.74924 1557.74548 2.42 0.00125 0/0 0 0 644447.4375 HCD 30 MS2 56.67616 107.1 110 29.3275 5613 5613 5612 QEplus033719.raw F4 114.9 74.4 121.9 72.6 139.1 119.6 83 2.8 1 FALSE 1.14E-05 6.69E-05 0.89 -250 10423 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NADDDRPPR [R].nADDDRPPR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 0 3 3 0.7043 0 1 1 1 428.88794 1284.64927 1284.64939 -0.1 -0.00004 0/0 0 0 19299062 HCD 30 MS2 19.28305 438.5 52.482 29.3345 5616 5616 5612 QEplus033719.raw F4 540.9 346.7 461.8 339.6 511.5 430.2 125 3.28 1 FALSE 1.14E-05 8.14E-07 1.254 -250 10432 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNYNDR [R].tNYNDR.[Y] N-Term(TMT6plex) 5 Q58ET1 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=1 SV=1 Q58ET1; V9GX35; Q5EBG5; Q6P1A9; Q80UT7 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=1 SV=1; 60S ribosomal protein L7a (Fragment) OS=Mus musculus OX=10090 GN=Gm14214 PE=3 SV=1; 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=2 SV=1; 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=2 SV=1; 60S ribosomal protein L7a (Fragment) OS=Mus musculus OX=10090 GN=Rpl7a PE=2 SV=1 0 2 2 0.3902 0 1 1 1 506.25681 1011.50633 1011.50569 0.64 0.00032 0/0 0 0 16455149 HCD 30 MS2 18.61037 569.9 84.845 29.3368 5617 5617 5612 QEplus033719.raw F4 617.2 417.2 717.5 595.6 468.9 602.9 52 2.64 1 FALSE 0.004981 0.08678 0.043 -250 10457 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSEGEGGNSMR [K].sSEGEGGNSMR.[T] N-Term(TMT6plex) 9 Q542P4 55 kDa erythrocyte membrane protein OS=Mus musculus OX=10090 GN=Mpp1 PE=1 SV=1 Q542P4; Q684Q6; A2AN84; B7ZCL8; B7ZCM0; B7ZCL9; D6RFD5; Q3THA8; B7ZCM1 55 kDa erythrocyte membrane protein OS=Mus musculus OX=10090 GN=Mpp1 PE=1 SV=1; 55 kDa erythrocyte membrane protein (Fragment) OS=Mus musculus OX=10090 GN=Mpp1 PE=2 SV=1; 55 kDa erythrocyte membrane protein OS=Mus musculus OX=10090 GN=Mpp1 PE=1 SV=1; 55 kDa erythrocyte membrane protein OS=Mus musculus OX=10090 GN=Mpp1 PE=1 SV=1; 55 kDa erythrocyte membrane protein (Fragment) OS=Mus musculus OX=10090 GN=Mpp1 PE=1 SV=1; 55 kDa erythrocyte membrane protein (Fragment) OS=Mus musculus OX=10090 GN=Mpp1 PE=1 SV=1; 55 kDa erythrocyte membrane protein OS=Mus musculus OX=10090 GN=Mpp1 PE=1 SV=1; PDZ domain-containing protein OS=Mus musculus OX=10090 GN=Mpp1 PE=2 SV=1; 55 kDa erythrocyte membrane protein (Fragment) OS=Mus musculus OX=10090 GN=Mpp1 PE=1 SV=8 0 2 2 0.7473 0 1 1 1 670.31018 1339.61308 1339.61096 1.59 0.00106 0/0 0 0 2019224.875 HCD 30 MS2 0 132.8 110 29.3443 5620 5620 5612 QEplus033719.raw F4 121.8 149.7 154.2 85.4 184.3 101.6 31 3.76 1 FALSE 1.14E-05 1.96E-09 1.752 -250 10462 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNPAMTR [R].dNPAmTR.[G] N-Term(TMT6plex); M5(Oxidation) 6 Q8C2D1 "Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1" Q3U890; Q8C2D1; Q61035; Q8VDX8; Q3UDH1; Q9D094 "Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars1 PE=1 SV=2; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1" 0 2 2 0.299 0 1 1 1 525.26685 1049.52641 1049.52471 1.62 0.00085 0/0 0 0 1144665.5 HCD 30 MS2 0 113 110 29.3468 5621 5621 5612 QEplus033719.raw F4 138.4 86.2 129.8 90.7 133.9 99 146 2.04 1 FALSE 0.004237 0.07818 0.066 -250 10471 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASDEVGDRDHR [R].aSDEVGDRDHR.[R] N-Term(TMT6plex) 7 Q3UXT5 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Txlna PE=2 SV=1 A2ADZ4; A2ADZ3; Q3UXT5; Q8C5K1; Q3UD58; A2ADZ2; Q6PAM1-2 Alpha-taxilin (Fragment) OS=Mus musculus OX=10090 GN=Txlna PE=1 SV=1; Alpha-taxilin (Fragment) OS=Mus musculus OX=10090 GN=Txlna PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Txlna PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Txlna PE=2 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Txlna PE=2 SV=1; Alpha-taxilin (Fragment) OS=Mus musculus OX=10090 GN=Txlna PE=1 SV=1; Isoform 2 of Alpha-taxilin OS=Mus musculus OX=10090 GN=Txlna 1 3 3 0.4804 0 1 1 1 495.91348 1485.72589 1485.72435 1.04 0.00052 0/0 0 0 6773521.5 HCD 30 MS2 18.90218 275.6 110 29.3493 5622 5622 5612 QEplus033719.raw F4 314 211.1 285.6 206.6 380.8 255.4 119 3.06 1 FALSE 1.14E-05 3.89E-05 0.935 -250 10484 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGMEENRR [K].tGMEENRR.[L] N-Term(TMT6plex) 2 Q09XV5 Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus OX=10090 GN=Chd8 PE=1 SV=1 Q09XV5; Q09XV5-2 Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus OX=10090 GN=Chd8 PE=1 SV=1; Isoform 2 of Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus OX=10090 GN=Chd8 1 3 3 0.1822 0 1 1 1 407.87897 1221.62235 1221.62074 1.32 0.00054 0/0 0 0 1970796.875 HCD 30 MS2 51.23074 208.3 110 29.3591 5625 5625 5623 QEplus033719.raw F4 282.7 169.5 219.9 145.6 224.3 207.7 138 2.69 1 FALSE 0.0002518 0.005087 0.499 -250 10493 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHSVEECR [R].aHSVEEcR.[C] N-Term(TMT6plex); C7(Carbamidomethyl) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 3 3 0.7114 0 1 1 1 406.2038 1216.59684 1216.59419 2.18 0.00088 0/0 0 0 38757452 HCD 30 MS2 44.72774 268.4 19.274 29.3613 5626 5626 5623 QEplus033719.raw F4 410.5 228.3 293.4 184.3 242.1 251.7 61 3.43 2 FALSE 0.0002119 0.004327 0.518 -250 10500 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EREVEER [R].eREVEER.[L] N-Term(TMT6plex) 8 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 2 2 0.2152 0 1 1 1 588.31519 1175.62309 1175.62178 1.12 0.00066 0/0 0 0 14353422 HCD 30 MS2 4.467548 178.1 110 29.3638 5627 5627 5623 QEplus033719.raw F4 214.6 116.9 184.4 163.2 216.4 173.1 236 2.23 1 FALSE 0.0005848 0.00874 0.426 -250 10510 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSTPSPR [R].qSTPSPR.[A] N-Term(TMT6plex) 10 Q8C9L6; A2API8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1;Paralemmin A kinase anchor protein OS=Mus musculus OX=10090 GN=Pakap PE=1 SV=1 Q69ZV5; O54931-3; O54931-4; Q8C9L6; A2API8; O54931-2; Q99L95; O54931-5; O54931; F7AA26 MKIAA0920 protein (Fragment) OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1; Isoform 3 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; Isoform 4 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1; Paralemmin A kinase anchor protein OS=Mus musculus OX=10090 GN=Pakap PE=1 SV=1; Isoform 2 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; Akap2 protein OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1; Isoform 5 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2 PE=1 SV=3; Paralemmin A kinase anchor protein (Fragment) OS=Mus musculus OX=10090 GN=Pakap PE=1 SV=1 0 2 2 0.2062 0 1 1 1 501.28271 1001.55815 1001.55772 0.43 0.00021 0/0 0 0 5117291.5 HCD 30 MS2 45.01017 370.8 110 29.3688 5629 5629 5623 QEplus033719.raw F4 419.6 315.3 409.7 231.2 541.3 307.9 130 1.94 2 FALSE 0.001541 0.02323 0.256 -250 10523 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSSVSTCGAGR [K].rSSVSTcGAGR.[L] N-Term(TMT6plex); C7(Carbamidomethyl) 3 A0A3B2WAS6 Kinetochore protein Hec1 OS=Mus musculus OX=10090 GN=Ndc80 PE=1 SV=1 A0A3B2WAS6; A0A3B2WDB5; Q9D0F1 Kinetochore protein Hec1 OS=Mus musculus OX=10090 GN=Ndc80 PE=1 SV=1; Kinetochore protein NDC80 homolog OS=Mus musculus OX=10090 GN=Ndc80 PE=4 SV=1; Kinetochore protein NDC80 homolog OS=Mus musculus OX=10090 GN=Ndc80 PE=1 SV=1 1 3 3 0.5206 0 1 1 1 456.23935 1366.70349 1366.70586 -1.73 -0.00079 0/0 0 0 3606037 HCD 30 MS2 40.70124 157.6 110 29.3739 5631 5631 5623 QEplus033719.raw F4 203.7 101.8 159.6 122.2 178.7 179.7 201 3.4 1 FALSE 2.26E-05 0.001065 0.657 -250 10545 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGSDGYGSGR [R].gGSDGYGSGR.[G] N-Term(TMT6plex) 4 O88569 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2 O88569-3; B7ZP22; O88569; O88569-2 Isoform 3 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2; Isoform 2 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 0 2 2 0.6347 0 1 1 1 571.27539 1141.5435 1141.54353 -0.02 -0.00001 0/0 0 0 2420373.75 HCD 30 MS2 23.46087 143.5 110 29.3887 5636 5636 5634 QEplus033719.raw F4 173.4 105.6 150.3 105.9 215.8 109.9 50 2.71 1 FALSE 1.14E-05 1.74E-06 1.192 -250 10560 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGPPGGGSR [K].aGPPGGGSR.[A] N-Term(TMT6plex) 3 Q6NVF9 Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1 Q6NVF9; H3BJ30; H3BJW3 Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1; Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1; Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1 0 2 2 0.516 0 1 1 1 492.77469 984.5421 984.54241 -0.31 -0.00015 0/0 0 0 3716698.5 HCD 30 MS2 24.66488 366.1 110 29.3959 5639 5639 5634 QEplus033719.raw F4 417 326.9 469.2 288 396.8 298.5 85 2.81 1 FALSE 3.35E-05 0.001309 0.638 -250 10576 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSAPSHSMSSR [R].sSAPSHSMSSR.[R] N-Term(TMT6plex) 4 B1AZP2 Disks large-associated protein 4 OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1 B1AZP2-3; B1AZP2; B7ZNS2; Q3UCF7 Isoform 3 of Disks large-associated protein 4 OS=Mus musculus OX=10090 GN=Dlgap4; Disks large-associated protein 4 OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1; Disks large-associated protein 4 OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Dlgap4 PE=2 SV=1 0 3 3 0.6336 0 1 1 1 454.89267 1362.66346 1362.66333 0.09 0.00004 0/0 0 0 2837532 HCD 30 MS2 18.79649 118.9 110 29.4009 5641 5641 5634 QEplus033719.raw F4 170.7 83 127.3 121 113.8 97.8 73 3.93 1 FALSE 1.14E-05 3.09E-05 0.954 -250 10585 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAVAHCHEADR [K].dAVAHcHEADR.[N] N-Term(TMT6plex); C6(Carbamidomethyl) 1 Q9ERU9 E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 Q9ERU9 E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 0 3 3 0.6607 0 1 1 1 503.90643 1509.70475 1509.70659 -1.22 -0.00061 0/0 0 0 2715362 HCD 30 MS2 21.53007 165.9 110 29.4059 5643 5643 5634 QEplus033719.raw F4 227.8 140.7 174.6 105.7 178.8 168 47 5.04 1 FALSE 1.14E-05 1.99E-10 1.94 -250 10593 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NHDGECTAAPTNR [R].nHDGEcTAAPTNR.[Q] N-Term(TMT6plex); C6(Carbamidomethyl) 1 Q9Z0W3 Nuclear pore complex protein Nup160 OS=Mus musculus OX=10090 GN=Nup160 PE=1 SV=2 Q9Z0W3 Nuclear pore complex protein Nup160 OS=Mus musculus OX=10090 GN=Nup160 PE=1 SV=2 0 3 3 0.7706 0 1 1 1 557.92883 1671.77195 1671.77065 0.78 0.00043 0/0 0 0 2151742.5 HCD 30 MS2 27.1307 119.4 110 29.4084 5644 5644 5634 QEplus033719.raw F4 118.5 94.1 129.4 106.3 157.2 111.1 45 5.1 1 FALSE 1.14E-05 6.81E-11 2.029 -250 10601 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQQSEVTR [K].sQQSEVTR.[I] N-Term(TMT6plex) 1 Q91VW3 SH3 domain-binding glutamic acid-rich-like protein 3 OS=Mus musculus OX=10090 GN=Sh3bgrl3 PE=1 SV=1 Q91VW3 SH3 domain-binding glutamic acid-rich-like protein 3 OS=Mus musculus OX=10090 GN=Sh3bgrl3 PE=1 SV=1 0 2 2 0.4343 0 1 1 1 582.31073 1163.61418 1163.62178 -6.53 -0.0038 0/0 0 0 1518337.25 HCD 30 MS2 72.17983 208.9 110 29.4182 5647 5647 5645 QEplus033719.raw F4 248.2 168.3 217 197.2 235.3 187.6 195 1.98 1 FALSE 0.006568 0.1047 -0.006 -250 10610 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHSVEECR [R].aHSVEEcR.[C] N-Term(TMT6plex); C7(Carbamidomethyl) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.7099 0 1 1 1 608.80121 1216.59514 1216.59419 0.78 0.00048 0/0 0 0 25979412 HCD 30 MS2 13.40121 556.6 75.626 29.4205 5648 5648 5645 QEplus033719.raw F4 564.7 451.9 726.1 675.1 442.4 479.4 64 3.24 2 FALSE 5.44E-05 0.00258 0.573 -250 10631 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHTGEAAAVR [K].sHTGEAAAVR.[G] N-Term(TMT6plex) 3 P59017 Bcl-2-like protein 13 OS=Mus musculus OX=10090 GN=Bcl2l13 PE=1 SV=2 P59017; Q3TNR7; Q3UGC5 Bcl-2-like protein 13 OS=Mus musculus OX=10090 GN=Bcl2l13 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Bcl2l13 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Bcl2l13 PE=2 SV=1 0 3 3 0.607 0 1 1 1 409.89362 1227.66629 1227.66431 1.61 0.00066 0/0 0 0 7882342.5 HCD 30 MS2 14.52533 267.8 110 29.4275 5651 5651 5645 QEplus033719.raw F4 376.7 145.9 283.6 250.2 244.3 306.2 197 5.14 1 FALSE 1.14E-05 2.59E-11 2.108 -250 10637 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAVAHCHEADR [K].dAVAHcHEADR.[N] N-Term(TMT6plex); C6(Carbamidomethyl) 1 Q9ERU9 E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 Q9ERU9 E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 0 4 4 0.6667 0 1 1 1 378.18207 1509.70644 1509.70659 -0.1 -0.00004 0/0 0 0 6985059 HCD 30 MS2 43.13253 253.1 110 29.43 5652 5652 5645 QEplus033719.raw F4 407.2 171 286.3 196.6 183.5 273.8 51 3.57 1 FALSE 1.14E-05 1.57E-07 1.39 -250 10651 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TESCPQGRPAR [R].tEScPQGRPAR.[V] N-Term(TMT6plex); C4(Carbamidomethyl) 2 Q497V5 S1 RNA-binding domain-containing protein 1 OS=Mus musculus OX=10090 GN=Srbd1 PE=2 SV=3 Q497V5; F8WGW3 S1 RNA-binding domain-containing protein 1 OS=Mus musculus OX=10090 GN=Srbd1 PE=2 SV=3; S1 RNA-binding domain-containing protein 1 OS=Mus musculus OX=10090 GN=Srbd1 PE=1 SV=1 0 3 3 0.4794 0 1 1 1 496.59286 1487.76404 1487.75863 3.64 0.00181 0/0 0 0 3730374.5 HCD 30 MS2 36.18782 218.8 110 29.435 5654 5654 5645 QEplus033719.raw F4 326.6 184.5 214 152 262.2 173.5 215 2.67 1 FALSE 1.14E-05 0.0004875 0.724 -250 10666 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQDPQTAGR [K].tQDPQTAGR.[I] N-Term(TMT6plex) 4 D3Z5I1 Zinc finger CCCH-type antiviral protein 1 OS=Mus musculus OX=10090 GN=Zc3hav1 PE=1 SV=1 Q3UPF5; D3Z5I1; Q3UPF5-2; G3X9X5 Zinc finger CCCH-type antiviral protein 1 OS=Mus musculus OX=10090 GN=Zc3hav1 PE=1 SV=1; Zinc finger CCCH-type antiviral protein 1 OS=Mus musculus OX=10090 GN=Zc3hav1 PE=1 SV=1; Isoform 2 of Zinc finger CCCH-type antiviral protein 1 OS=Mus musculus OX=10090 GN=Zc3hav1; Zinc finger CCCH-type antiviral protein 1 OS=Mus musculus OX=10090 GN=Zc3hav1 PE=1 SV=1 0 2 2 0.4109 0 1 1 1 601.82062 1202.63396 1202.63268 1.06 0.00064 0/0 0 0 7687389 HCD 30 MS2 7.989849 261 110 29.4473 5658 5658 5656 QEplus033719.raw F4 270.6 233.8 245.2 197.4 401.7 217.5 178 3.48 1 FALSE 1.14E-05 1.33E-05 1.024 -250 10672 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMSGRPTR [K].gMSGRPTR.[T] N-Term(TMT6plex) 2 Q9CPY7 Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 PE=1 SV=3 Q9CPY7; Q9CPY7-2 Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 PE=1 SV=3; Isoform 2 of Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 0 3 3 0.5202 0 1 1 1 364.2045 1090.59894 1090.59888 0.06 0.00002 0/0 0 0 49914136 HCD 30 MS2 9.736687 435 24.054 29.4496 5659 5659 5656 QEplus033719.raw F4 511.2 307.7 407.5 441.9 594.9 346.8 232 2.48 1 FALSE 0.0008183 0.0113 0.384 -250 10706 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHGNSGMVR [R].aHGNSGMVR.[A] N-Term(TMT6plex) 3 O55142 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2 O55142; Q9DC85; Q8BQV7 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1 0 3 3 0.6333 0 1 1 1 386.54004 1157.60556 1157.60469 0.75 0.00029 0/0 0 0 9994329 HCD 30 MS2 56.05986 260.9 65.611 29.4608 5664 5664 5656 QEplus033719.raw F4 362.7 202.7 255.9 304.4 267.8 172.2 119 4.39 1 FALSE 1.14E-05 2.63E-07 1.348 -250 10713 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLANHGQTR [R].gLANHGQTR.[H] N-Term(TMT6plex) 3 M1VMF6 Metastasis-associated protein MTA1 isoform 9 OS=Mus musculus OX=10090 GN=Mta1 PE=2 SV=1 M1VMF6; M1VHG1; F8WHY8 Metastasis-associated protein MTA1 isoform 9 OS=Mus musculus OX=10090 GN=Mta1 PE=2 SV=1; Metastasis-associated protein MTA1 isoform 1 OS=Mus musculus OX=10090 GN=Mta1 PE=1 SV=1; Metastasis-associated protein MTA1 OS=Mus musculus OX=10090 GN=Mta1 PE=1 SV=1 0 3 3 0.5876 0 1 1 1 394.88989 1182.65512 1182.65408 0.88 0.00035 0/0 0 0 9401242 HCD 30 MS2 18.52706 292.7 110 29.4633 5665 5665 5656 QEplus033719.raw F4 381.2 214 281.4 239.1 388.3 252.4 217 3.88 1 FALSE 1.14E-05 2.55E-05 0.97 -250 10725 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQYQQR [K].aQYQQR.[W] N-Term(TMT6plex) 4 Q3TFE8 Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1 Q3TFE8; Q7TSZ6; Q3UHW8; P70168 Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1; Karyopherin (Importin) beta 1 OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1; Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1; Importin subunit beta-1 OS=Mus musculus OX=10090 GN=Kpnb1 PE=1 SV=2 0 2 2 0.3615 0 1 1 1 511.78323 1022.55919 1022.55806 1.11 0.00057 0/0 0 0 14417736 HCD 30 MS2 1.780937 619.2 110 29.4731 5668 5668 5667 QEplus033719.raw F4 617.3 603.1 798.6 482.8 657.3 556.2 202 2.13 1 FALSE 0.0023 0.04516 0.157 -250 10738 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPEEEDQR [K].sPEEEDQR.[T] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.6644 0 1 1 1 609.79431 1218.58135 1218.57998 1.12 0.00069 0/0 0 0 32014984 HCD 30 MS2 20.74772 594.7 53.34 29.4779 5670 5670 5667 QEplus033719.raw F4 758.4 317.9 643.3 631.5 526.7 690.5 47 2.92 1 FALSE 1.14E-05 0.0006777 0.696 -250 10756 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVTHPR [K].dVTHPR.[M] N-Term(TMT6plex) 5 Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 Q3UJP4; E9Q133; Q3U0I3; Q3TBM6; Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 0 2 2 0.4597 0 1 1 1 477.27234 953.5374 953.5366 0.85 0.0004 0/0 0 0 6057269 HCD 30 MS2 46.79378 634.8 110 29.4904 5675 5675 5667 QEplus033719.raw F4 959 484 697.5 488 654.4 525.8 73 2.11 1 FALSE 0.004508 0.08036 0.06 -250 10767 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHGNSGMVR [R].aHGNSGMVR.[A] N-Term(TMT6plex) 3 O55142 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2 O55142; Q9DC85; Q8BQV7 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1 0 2 2 0.4701 0 1 1 1 579.30646 1157.60564 1157.60469 0.82 0.00047 0/0 0 0 5470401 HCD 30 MS2 19.13628 426.1 110 29.4954 5677 5677 5667 QEplus033719.raw F4 543.3 317.8 373 628.6 511.8 182.1 119 2.68 1 FALSE 1.14E-05 0.0003374 0.756 -250 10775 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAAEQAER [K].eAAEQAER.[S] N-Term(TMT6plex) 1 O54941 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 OS=Mus musculus OX=10090 GN=Smarce1 PE=1 SV=1 O54941 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 OS=Mus musculus OX=10090 GN=Smarce1 PE=1 SV=1 0 2 2 0.5109 0 1 1 1 566.79364 1132.58 1132.57958 0.37 0.00021 0/0 0 0 7483924.5 HCD 30 MS2 0 327.5 110 29.5027 5679 5679 5678 QEplus033719.raw F4 426.6 299.9 370.7 229 396.2 242.8 127 2.76 1 FALSE 1.14E-05 0.0001008 0.856 -250 10791 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHCEEYGR [K].eHcEEYGR.[M] N-Term(TMT6plex); C3(Carbamidomethyl) 2 Q99LF4 RNA-splicing ligase RtcB homolog OS=Mus musculus OX=10090 GN=Rtcb PE=1 SV=1 Q99LF4; Q3TJ01 RNA-splicing ligase RtcB homolog OS=Mus musculus OX=10090 GN=Rtcb PE=1 SV=1; RNA-splicing ligase RtcB homolog OS=Mus musculus OX=10090 GN=Rtcb PE=2 SV=1 0 3 3 0.693 0 1 1 1 436.86618 1308.58399 1308.58402 -0.02 -0.00001 0/0 0 0 19307920 HCD 30 MS2 45.61348 408.5 48.009 29.5097 5682 5682 5678 QEplus033719.raw F4 585.3 262.2 443 430 295 435.5 14 3.55 1 FALSE 0.0001504 0.003271 0.549 -250 10796 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAQSYAER [K].rAQSYAER.[L] N-Term(TMT6plex) 3 Q9D0M1 Phosphoribosyl pyrophosphate synthase-associated protein 1 OS=Mus musculus OX=10090 GN=Prpsap1 PE=1 SV=1 Q9D0M1; B1AT82; Q8BK29 Phosphoribosyl pyrophosphate synthase-associated protein 1 OS=Mus musculus OX=10090 GN=Prpsap1 PE=1 SV=1; Phosphoribosyl pyrophosphate synthase-associated protein 1 OS=Mus musculus OX=10090 GN=Prpsap1 PE=1 SV=1; Pribosyltran_N domain-containing protein OS=Mus musculus OX=10090 GN=Prpsap1 PE=2 SV=1 1 3 3 0.3629 0 1 1 1 403.88971 1209.65458 1209.65375 0.68 0.00028 0/0 0 0 11766645 HCD 30 MS2 22.26068 338.8 99.492 29.512 5683 5683 5678 QEplus033719.raw F4 356.4 260 396.3 265.2 439.8 315 245 3.83 1 FALSE 1.14E-05 1.49E-05 1.014 -250 10809 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGNPGSDGQPGR [R].dGNPGSDGQPGR.[D] N-Term(TMT6plex) 7 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 2 2 0.7003 0 1 1 1 693.33411 1385.66094 1385.66069 0.18 0.00013 0/0 0 0 7249860 HCD 30 MS2 3.484612 182.7 110 29.517 5685 5685 5678 QEplus033719.raw F4 137 197.2 216.6 156.5 147.3 241.7 63 3.47 1 FALSE 1.14E-05 1.09E-10 1.99 -250 10825 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVESTR [K].nVESTR.[T] N-Term(TMT6plex) 1 Q9D1H8 "39S ribosomal protein L53, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl53 PE=1 SV=1" Q9D1H8 "39S ribosomal protein L53, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl53 PE=1 SV=1" 0 2 2 0.3973 0 1 1 1 467.76163 934.51598 934.51553 0.48 0.00023 0/0 0 0 5264642 HCD 30 MS2 13.82136 369.1 110 29.522 5687 5687 5678 QEplus033719.raw F4 627.8 226.4 397.6 327.2 276.2 359.6 118 2.24 1 FALSE 0.001972 0.03399 0.198 -250 10838 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHCEEYGR [K].eHcEEYGR.[M] N-Term(TMT6plex); C3(Carbamidomethyl) 2 Q99LF4 RNA-splicing ligase RtcB homolog OS=Mus musculus OX=10090 GN=Rtcb PE=1 SV=1 Q99LF4; Q3TJ01 RNA-splicing ligase RtcB homolog OS=Mus musculus OX=10090 GN=Rtcb PE=1 SV=1; RNA-splicing ligase RtcB homolog OS=Mus musculus OX=10090 GN=Rtcb PE=2 SV=1 0 2 2 0.7595 0 1 1 1 654.7962 1308.58513 1308.58402 0.85 0.00056 0/0 0 0 3805974.5 HCD 30 MS2 33.25296 191.1 110 29.5318 5690 5690 5689 QEplus033719.raw F4 226 144.4 191.5 187.7 219.3 178 14 3.16 1 FALSE 5.44E-05 0.002152 0.591 -250 10842 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHTGEAAAVR [K].sHTGEAAAVR.[G] N-Term(TMT6plex) 3 P59017 Bcl-2-like protein 13 OS=Mus musculus OX=10090 GN=Bcl2l13 PE=1 SV=2 P59017; Q3TNR7; Q3UGC5 Bcl-2-like protein 13 OS=Mus musculus OX=10090 GN=Bcl2l13 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Bcl2l13 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Bcl2l13 PE=2 SV=1 0 2 2 0.472 0 1 1 1 614.336 1227.66472 1227.66431 0.33 0.0002 0/0 0 0 1338528.5 HCD 30 MS2 38.81646 75.9 110 29.5343 5691 5691 5689 QEplus033719.raw F4 75.4 53.5 73.1 95.3 72 86.1 219 2.5 1 FALSE 1.14E-05 0.0008124 0.68 -250 10848 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEEGVRR [R].eAEEGVRR.[K] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.2446 0 1 1 1 392.21725 1174.63721 1174.63777 -0.47 -0.00018 0/0 0 0 10995597 HCD 30 MS2 23.35675 417.5 84.471 29.5366 5692 5692 5689 QEplus033719.raw F4 575.9 313.5 401.8 392.3 472.2 349.4 291 3.23 2 FALSE 3.35E-05 0.00114 0.65 -250 10855 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCTSDSVR [K].ncTSDSVR.[E] N-Term(TMT6plex); C2(Carbamidomethyl) 8 K7Q751 Non-specific protein-tyrosine kinase OS=Mus musculus OX=10090 GN=Ptk2 PE=2 SV=1 K7Q751; P34152-5; A0A5F8MPY3; P34152-2; P34152-6; P34152-7; P34152-4; P34152 Non-specific protein-tyrosine kinase OS=Mus musculus OX=10090 GN=Ptk2 PE=2 SV=1; Isoform 5 of Focal adhesion kinase 1 OS=Mus musculus OX=10090 GN=Ptk2; Non-specific protein-tyrosine kinase OS=Mus musculus OX=10090 GN=Ptk2 PE=1 SV=1; Isoform 2 of Focal adhesion kinase 1 OS=Mus musculus OX=10090 GN=Ptk2; Isoform 6 of Focal adhesion kinase 1 OS=Mus musculus OX=10090 GN=Ptk2; Isoform 7 of Focal adhesion kinase 1 OS=Mus musculus OX=10090 GN=Ptk2; Isoform 4 of Focal adhesion kinase 1 OS=Mus musculus OX=10090 GN=Ptk2; Focal adhesion kinase 1 OS=Mus musculus OX=10090 GN=Ptk2 PE=1 SV=4 0 2 2 0.6163 0 1 1 1 584.28552 1167.56377 1167.56255 1.04 0.00061 0/0 0 0 7684731.5 HCD 30 MS2 15.39987 349.6 110 29.5416 5694 5694 5689 QEplus033719.raw F4 368.4 306.6 358.9 263.9 506.2 293.5 59 2.45 1 FALSE 6.52E-05 0.002691 0.569 -250 10869 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QMVHGGNQR [R].qMVHGGNQR.[W] N-Term(TMT6plex) 7 A0A1L1STC6 Nesprin-1 OS=Mus musculus OX=10090 GN=Syne1 PE=1 SV=1 Q7TQH5; A0A1L1STC6; Q6PI72; Q6ZWR6-2; Q0VGB8; Q6ZWR6-4; Q6ZWR6 Synaptic nuclear envelope 1 OS=Mus musculus OX=10090 GN=Syne1 PE=2 SV=1; Nesprin-1 OS=Mus musculus OX=10090 GN=Syne1 PE=1 SV=1; Syne1 protein (Fragment) OS=Mus musculus OX=10090 GN=Syne1 PE=2 SV=1; Isoform 2 of Nesprin-1 OS=Mus musculus OX=10090 GN=Syne1; Synaptic nuclear envelope 1 OS=Mus musculus OX=10090 GN=Syne1 PE=2 SV=1; Isoform 4 of Nesprin-1 OS=Mus musculus OX=10090 GN=Syne1; Nesprin-1 OS=Mus musculus OX=10090 GN=Syne1 PE=1 SV=2 0 3 3 0.6143 0 1 1 1 419.22217 1255.65195 1255.6527 -0.6 -0.00025 0/0 0 0 3635731.5 HCD 30 MS2 35.26006 138 110 29.5466 5696 5696 5689 QEplus033719.raw F4 175.7 89.5 138.7 165.4 130.4 128.3 194 3.5 1 FALSE 4.43E-05 0.001545 0.623 -250 10898 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSNSEMTSR [K].nSNSEMTSR.[V] N-Term(TMT6plex) 1 Q9ERU9 E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 Q9ERU9 E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 0 2 2 0.8039 0 1 1 1 627.80145 1254.59563 1254.59458 0.84 0.00052 0/0 0 0 4182050 HCD 30 MS2 12.80426 200.4 110 29.5639 5702 5702 5700 QEplus033719.raw F4 237.3 173 188.5 146.7 295.6 161.1 67 3.06 1 FALSE 1.14E-05 2.30E-05 0.979 -250 10904 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLQQHQAGR [R].gLQQHQAGR.[T] N-Term(TMT6plex) 6 F8WHT5 Protein Mpv17 OS=Mus musculus OX=10090 GN=Mpv17 PE=1 SV=1 F8WHT5; P19258; E9Q1I6; G3UVW1; D3YWI4; A0A0J9YVC7 Protein Mpv17 OS=Mus musculus OX=10090 GN=Mpv17 PE=1 SV=1; Protein Mpv17 OS=Mus musculus OX=10090 GN=Mpv17 PE=1 SV=1; Protein Mpv17 OS=Mus musculus OX=10090 GN=Mpv17 PE=1 SV=1; Protein Mpv17 OS=Mus musculus OX=10090 GN=Mpv17 PE=1 SV=1; Protein Mpv17 OS=Mus musculus OX=10090 GN=Mpv17 PE=1 SV=1; Protein Mpv17 (Fragment) OS=Mus musculus OX=10090 GN=Mpv17 PE=1 SV=1 0 3 3 0.721 0 1 1 1 408.565 1223.68045 1223.68063 -0.15 -0.00006 0/0 0 0 8407073 HCD 30 MS2 52.13987 263.4 110 29.5687 5704 5704 5700 QEplus033719.raw F4 467.7 145.8 253 253 175.3 285.6 355 4.23 1 FALSE 1.14E-05 2.13E-06 1.175 -250 10912 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQENSPGHR [R].vQENSPGHR.[A] N-Term(TMT6plex) 5 Q99JX3 Golgi reassembly-stacking protein 2 OS=Mus musculus OX=10090 GN=Gorasp2 PE=1 SV=3 A2ATI8; Q99JX3; Q3TX06; Q3TIK1; A2ATI6 Golgi reassembly-stacking protein 2 OS=Mus musculus OX=10090 GN=Gorasp2 PE=1 SV=1; Golgi reassembly-stacking protein 2 OS=Mus musculus OX=10090 GN=Gorasp2 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Gorasp2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Gorasp2 PE=2 SV=1; Golgi reassembly-stacking protein 2 OS=Mus musculus OX=10090 GN=Gorasp2 PE=1 SV=1 0 3 3 1 0 1 1 1 418.22482 1252.65992 1252.65956 0.28 0.00012 0/0 0 0 5624757 HCD 30 MS2 19.31189 248.3 110 29.5736 5706 5706 5700 QEplus033719.raw F4 471.1 139 235.7 198.6 240 205.6 187 4.47 1 FALSE 1.14E-05 6.29E-07 1.276 -250 10917 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ACRDVDECQHSR [R].acRDVDEcQHSR.[C] N-Term(TMT6plex); C2(Carbamidomethyl); C8(Carbamidomethyl) 1 P10493 Nidogen-1 OS=Mus musculus OX=10090 GN=Nid1 PE=1 SV=2 P10493 Nidogen-1 OS=Mus musculus OX=10090 GN=Nid1 PE=1 SV=2 1 4 4 0.8044 0 1 1 1 441.20438 1761.79567 1761.79582 -0.08 -0.00004 0/0 0 0 2249230 HCD 30 MS2 4.424754 113.1 110 29.5786 5708 5708 5700 QEplus033719.raw F4 118.6 108.8 145.6 91.9 116.8 96.9 27 4.96 1 FALSE 1.14E-05 2.73E-06 1.154 -250 10921 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEVTGR [R].nEVTGR.[A] N-Term(TMT6plex) 8 Q8VBT9 Tether containing UBX domain for GLUT4 OS=Mus musculus OX=10090 GN=Aspscr1 PE=1 SV=1 Q8VBT9-2; A2ABZ8; A2AC03; Q8VBT9-3; F7CRQ2; Q8VBT9; A2AC05; A2AC02 Isoform 2 of Tether containing UBX domain for GLUT4 OS=Mus musculus OX=10090 GN=Aspscr1; Tether-containing UBX domain for GLUT4 (Fragment) OS=Mus musculus OX=10090 GN=Aspscr1 PE=1 SV=8; Tether-containing UBX domain for GLUT4 (Fragment) OS=Mus musculus OX=10090 GN=Aspscr1 PE=1 SV=1; Isoform 3 of Tether containing UBX domain for GLUT4 OS=Mus musculus OX=10090 GN=Aspscr1; Tether-containing UBX domain for GLUT4 (Fragment) OS=Mus musculus OX=10090 GN=Aspscr1 PE=1 SV=1; Tether containing UBX domain for GLUT4 OS=Mus musculus OX=10090 GN=Aspscr1 PE=1 SV=1; Tether-containing UBX domain for GLUT4 (Fragment) OS=Mus musculus OX=10090 GN=Aspscr1 PE=1 SV=1; Tether-containing UBX domain for GLUT4 (Fragment) OS=Mus musculus OX=10090 GN=Aspscr1 PE=1 SV=1 0 2 2 0.1571 0 1 1 1 452.75562 904.50395 904.50496 -1.11 -0.0005 0/0 0 0 1845429.875 HCD 30 MS2 54.93081 236 110 29.5811 5709 5709 5700 QEplus033719.raw F4 392.9 172.8 276.4 171.6 200.7 201.7 144 2.1 1 FALSE 0.001482 0.02152 0.269 -250 10928 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NALHER [R].nALHER.[A] N-Term(TMT6plex) 11 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" Q3URW8; B9EKJ1; E9Q447; B2RXX6; A3KGU9; Q3V1V5; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.32 0 1 1 1 484.7789 968.55052 968.54749 3.13 0.00151 0/0 0 0 1676670.5 HCD 30 MS2 26.73963 278.3 110 29.5836 5710 5710 5700 QEplus033719.raw F4 427.4 201.2 355.8 270.3 155 260 104 2 2 FALSE 0.008127 0.1373 -0.071 -250 10938 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPEGERPAR [K].gPEGERPAR.[F] N-Term(TMT6plex) 5 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" P63325; Q3UW83; A0A338P7K4; Q3U9P0; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; S10_plectin domain-containing protein OS=Mus musculus OX=10090 GN=Rps10 PE=2 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 0 3 3 0.514 0 1 1 1 399.88953 1197.65403 1197.65375 0.23 0.00009 0/0 0 0 14900876 HCD 30 MS2 21.92523 505.8 86.079 29.5909 5712 5712 5711 QEplus033719.raw F4 826.4 328.4 450.6 402.2 550.9 476.4 228 3.21 2 FALSE 1.14E-05 0.0002812 0.771 -250 10944 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAQSYAER [K].rAQSYAER.[L] N-Term(TMT6plex) 3 Q9D0M1 Phosphoribosyl pyrophosphate synthase-associated protein 1 OS=Mus musculus OX=10090 GN=Prpsap1 PE=1 SV=1 Q9D0M1; B1AT82; Q8BK29 Phosphoribosyl pyrophosphate synthase-associated protein 1 OS=Mus musculus OX=10090 GN=Prpsap1 PE=1 SV=1; Phosphoribosyl pyrophosphate synthase-associated protein 1 OS=Mus musculus OX=10090 GN=Prpsap1 PE=1 SV=1; Pribosyltran_N domain-containing protein OS=Mus musculus OX=10090 GN=Prpsap1 PE=2 SV=1 1 2 2 0.3122 0 1 1 1 605.33093 1209.65459 1209.65375 0.69 0.00042 0/0 0 0 1577569.25 HCD 30 MS2 0 38.9 110 29.5935 5713 5713 5711 QEplus033719.raw F4 37.5 32.4 38.6 30.9 54.4 39.6 245 1.89 1 FALSE 0.009626 0.1837 -0.12 -250 10949 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GESQQEVQR [R].gESQQEVQR.[L] N-Term(TMT6plex) 3 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 E9Q7G0; Q3UNM2; F6ZQA3 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=2 SV=1; Nuclear mitotic apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 0 2 2 0.5279 0 1 1 1 645.336 1289.66472 1289.66471 0.01 0.00001 0/0 0 0 5521003.5 HCD 30 MS2 0 237.5 110 29.596 5714 5714 5711 QEplus033719.raw F4 231.5 259.4 234 139.9 380.4 179.7 219 3.05 1 FALSE 1.14E-05 2.87E-06 1.15 -250 10965 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASGHPGDPESQQR [K].aSGHPGDPESQQR.[L] N-Term(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 3 3 0.7562 0 1 1 1 532.26465 1594.77939 1594.77711 1.43 0.00076 0/0 0 0 4108905 HCD 30 MS2 5.840775 188.4 110 29.6035 5717 5717 5711 QEplus033719.raw F4 227.8 162.6 159.4 148.5 342.5 89.8 127 4.02 1 FALSE 1.14E-05 9.87E-08 1.428 -250 10971 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RHPVVAGGSGEGR [K].rHPVVAGGSGEGR.[K] N-Term(TMT6plex) 3 Z4YJT3 La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1 PE=1 SV=1 Z4YJT3; Q6ZQ58-2; Q6ZQ58 La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1 PE=1 SV=1; Isoform 2 of La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1; La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1 PE=1 SV=3 1 4 4 0.6984 0 1 1 1 377.7132 1507.83095 1507.82909 1.24 0.00047 0/0 0 0 2492864.25 HCD 30 MS2 29.21617 107.1 110 29.606 5718 5718 5711 QEplus033719.raw F4 143 79.2 104.9 77.5 127.2 111.1 421 4.51 1 FALSE 1.14E-05 6.76E-09 1.649 -250 10979 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSTGQCAQPSR [R].tSTGQcAQPSR.[S] N-Term(TMT6plex); C6(Carbamidomethyl) 1 Q0VBA8 Urokinase-type plasminogen activator OS=Mus musculus OX=10090 GN=Plau PE=1 SV=1 Q0VBA8 Urokinase-type plasminogen activator OS=Mus musculus OX=10090 GN=Plau PE=1 SV=1 0 2 2 0.6474 0 1 1 1 711.35419 1421.7011 1421.70044 0.46 0.00033 0/0 0 0 2075196.25 HCD 30 MS2 0 96.8 110 29.6085 5719 5719 5711 QEplus033719.raw F4 88.9 133.7 126.6 57.9 104.9 68.9 140 3.29 1 FALSE 1.14E-05 2.17E-07 1.363 -250 10985 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDGPGPER [R].qDGPGPER.[E] N-Term(TMT6plex) 1 Q69ZQ1 Myogenesis-regulating glycosidase OS=Mus musculus OX=10090 GN=Myorg PE=1 SV=2 Q69ZQ1 Myogenesis-regulating glycosidase OS=Mus musculus OX=10090 GN=Myorg PE=1 SV=2 0 2 2 0.5446 0 1 1 1 542.78314 1084.55901 1084.55845 0.51 0.00028 0/0 0 0 1424867.875 HCD 30 MS2 0 79.7 110 29.611 5720 5720 5711 QEplus033719.raw F4 89.9 36.4 72.8 104.5 66.4 108 96 2.13 1 FALSE 3.35E-05 0.00131 0.638 -250 10990 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHSELQNR [K].eHSELQNR.[L] N-Term(TMT6plex) 1 Q61334 B-cell receptor-associated protein 29 OS=Mus musculus OX=10090 GN=Bcap29 PE=1 SV=1 Q61334 B-cell receptor-associated protein 29 OS=Mus musculus OX=10090 GN=Bcap29 PE=1 SV=1 0 2 2 0.5138 0 1 1 1 621.32483 1241.64238 1241.64358 -0.96 -0.0006 0/0 0 0 1193407.375 HCD 30 MS2 0 51.3 110 29.6135 5721 5721 5711 QEplus033719.raw F4 52.1 34.1 48.5 59.5 60.3 53.6 124 2.53 1 FALSE 5.44E-05 0.002636 0.571 -250 10996 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATQGNTEENPR [K].aTQGNTEENPR.[E] N-Term(TMT6plex) 3 Q8C9B9 Death-inducer obliterator 1 OS=Mus musculus OX=10090 GN=Dido1 PE=1 SV=4 Q8C9B9; Q8C9B9-3; Q8C9B9-2 Death-inducer obliterator 1 OS=Mus musculus OX=10090 GN=Dido1 PE=1 SV=4; Isoform 3 of Death-inducer obliterator 1 OS=Mus musculus OX=10090 GN=Dido1; Isoform 2 of Death-inducer obliterator 1 OS=Mus musculus OX=10090 GN=Dido1 0 2 2 0.5859 0 1 1 1 723.3632 1445.71912 1445.7182 0.64 0.00046 0/0 0 0 0 HCD 30 MS2 26 110 29.6208 5723 5723 5722 QEplus033719.raw F4 24.2 24.7 21.9 18.6 37.6 28.7 102 3.26 1 FALSE 1.14E-05 2.70E-07 1.345 -250 11017 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAARPQEDDC [K].gAARPQEDDc.[-] N-Term(TMT6plex); C10(Carbamidomethyl) 1 F7B6A4 Potassium channel tetramerisation domain-containing 17 (Fragment) OS=Mus musculus OX=10090 GN=Kctd17 PE=1 SV=1 F7B6A4 Potassium channel tetramerisation domain-containing 17 (Fragment) OS=Mus musculus OX=10090 GN=Kctd17 PE=1 SV=1 0 2 2 0.9024 0 1 1 1 674.31201 1347.61675 1347.61604 0.52 0.00035 0/0 0 0 3438713.25 HCD 30 MS2 0 114.5 110 29.6331 5728 5728 5722 QEplus033719.raw F4 118.4 117.6 100.9 55.9 214 80.2 22 2.05 1 FALSE 0.001676 0.02756 0.229 -250 11027 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDNNEVDDR [K].gDNNEVDDR.[G] N-Term(TMT6plex) 3 D3Z5H3 Signal peptidase complex catalytic subunit SEC11 OS=Mus musculus OX=10090 GN=Sec11c PE=1 SV=2 D3Z5H3; A0A494BAT3; Q9D8V7 Signal peptidase complex catalytic subunit SEC11 OS=Mus musculus OX=10090 GN=Sec11c PE=1 SV=2; Signal peptidase complex catalytic subunit SEC11C OS=Mus musculus OX=10090 GN=Sec11c PE=1 SV=1; Signal peptidase complex catalytic subunit SEC11C OS=Mus musculus OX=10090 GN=Sec11c PE=1 SV=3 0 2 2 0.3179 0 1 1 1 631.79431 1262.58135 1262.58104 0.24 0.00015 0/0 0 0 2662051.75 HCD 30 MS2 0 123.6 110 29.6381 5730 5730 5722 QEplus033719.raw F4 141.1 88.6 103.6 131.9 159.9 116.8 26 3.02 1 FALSE 1.14E-05 3.24E-06 1.14 -250 11034 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGNPGSDGQPGR [R].dGNPGSDGQPGR.[D] N-Term(TMT6plex) 7 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 3 3 0.7736 0 1 1 1 462.55844 1385.66077 1385.66069 0.06 0.00003 0/0 0 0 2336563 HCD 30 MS2 12.6524 97.2 110 29.6406 5731 5731 5722 QEplus033719.raw F4 114.6 79.1 118 76.3 90.4 104.6 63 4.24 1 FALSE 1.14E-05 3.58E-05 0.942 -250 11043 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YAEERDR [KR].yAEERDR.[A] N-Term(TMT6plex) 10 Q5SV64; Q8VDD5 Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q80T68; Q5SV64; Q3UH59; Q8VDD5; Q6PB65; Q4KMN4; Q99JJ3; Q61879 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 1 3 3 0.0802 0 1 1 1 389.87003 1167.59552 1167.59557 -0.04 -0.00001 0/0 0 0 23370182 HCD 30 MS2 4.610917 490.3 61.584 29.6505 5734 5734 5733 QEplus033719.raw F4 528 460.4 536.5 365.3 693.5 358.4 155 2.62 2 FALSE 0.001851 0.03144 0.209 -250 11054 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREAEEGVR [R].qREAEEGVR.[R] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.5173 0 1 1 1 434.90378 1302.69678 1302.69634 0.34 0.00015 0/0 0 0 39022312 HCD 30 MS2 4.995626 318.2 34.64 29.6574 5737 5737 5733 QEplus033719.raw F4 332.1 250.6 320.6 289 374.9 342 327 3.75 2 FALSE 1.14E-05 3.73E-05 0.939 -250 11063 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGEGDYR [R].sGEGDYR.[T] N-Term(TMT6plex) 4 Q5SX75 Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha2 PE=1 SV=1 Q5SX75; Q3UQ81; Q60716; Q5SX74 Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha2 PE=1 SV=1; Fe2OG dioxygenase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=P4ha2 PE=2 SV=1; Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus OX=10090 GN=P4ha2 PE=1 SV=1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha2 PE=2 SV=1 0 2 2 0.3043 0 1 1 1 506.74899 1012.49071 1012.4897 0.99 0.0005 0/0 0 0 25089102 HCD 30 MS2 30.83976 588.9 44.35 29.6597 5738 5738 5733 QEplus033719.raw F4 631.1 361.9 479.1 912.7 709.2 439.2 24 1.61 1 FALSE 0.002334 0.04653 0.153 -250 11070 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGMDDDRGPR [R].rGMDDDRGPR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 2 3 3 0.6016 0 1 1 1 468.57162 1403.70032 1403.70111 -0.56 -0.00026 0/0 0 0 4749526 HCD 30 MS2 3.750097 225.9 110 29.6667 5741 5741 5733 QEplus033719.raw F4 299.5 174.3 233.8 168.8 243 236 106 3.64 1 FALSE 1.14E-05 1.24E-05 1.03 -250 11076 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADPDAAHRPR [K].aDPDAAHRPR.[I] N-Term(TMT6plex) 1 Q3TSG4 RNA demethylase ALKBH5 OS=Mus musculus OX=10090 GN=Alkbh5 PE=1 SV=2 Q3TSG4 RNA demethylase ALKBH5 OS=Mus musculus OX=10090 GN=Alkbh5 PE=1 SV=2 0 3 3 0.1697 0 1 1 1 445.57654 1334.71506 1334.71266 1.8 0.0008 0/0 0 0 5624182.5 HCD 30 MS2 15.78317 190.6 110 29.6692 5742 5742 5733 QEplus033719.raw F4 250.6 159.3 205 136.4 219.7 172.4 317 2.71 1 FALSE 0.0003408 0.006448 0.469 -250 11081 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREAEEGVR [R].qREAEEGVR.[R] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.4457 0 1 1 1 651.85211 1302.69695 1302.69634 0.46 0.0003 0/0 0 0 5164346 HCD 30 MS2 0 71.4 110 29.6717 5743 5743 5733 QEplus033719.raw F4 71.6 53.5 71.4 63.3 91.9 76.4 331 2.67 2 FALSE 1.14E-05 0.0006446 0.7 -250 11109 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRDELNR [R].qRDELNR.[A] N-Term(TMT6plex) 8 Q5SW18 Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1 Q3UGR6; Q3TIK0; Q5SW18; Q5SW16; Q3UH92; Q3TUH5; P63005-2; Q3TJG1 Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1; Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1; Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1; Platelet-activating factor acetylhydrolase IB subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Pafah1b1 PE=1 SV=1; Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1; LisH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1; Isoform 2 of Platelet-activating factor acetylhydrolase IB subunit beta OS=Mus musculus OX=10090 GN=Pafah1b1; Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1 1 2 2 0.1553 0 1 1 1 580.32367 1159.64006 1159.6381 1.69 0.00098 0/0 0 0 6018555 HCD 30 MS2 28.0822 217.2 110 29.6865 5748 5748 5744 QEplus033719.raw F4 239.3 163.5 191.5 203 336.7 169.1 252 2.06 1 FALSE 0.004832 0.08468 0.049 -250 11115 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YAEERDR [KR].yAEERDR.[A] N-Term(TMT6plex) 10 Q5SV64; Q8VDD5 Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q80T68; Q5SV64; Q3UH59; Q8VDD5; Q6PB65; Q4KMN4; Q99JJ3; Q61879 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 1 2 2 0.2 0 1 1 1 584.30371 1167.60015 1167.59557 3.92 0.00229 0/0 0 0 5910565 HCD 30 MS2 19.18016 395.2 110 29.6891 5749 5749 5744 QEplus033719.raw F4 407.2 378.6 437.2 302 558 287.9 131 2.3 2 FALSE 0.0023 0.0451 0.157 -250 11123 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEPGEDR [R].eAEPGEDR.[T] N-Term(TMT6plex) 4 Q8CES0 N-alpha-acetyltransferase 30 OS=Mus musculus OX=10090 GN=Naa30 PE=1 SV=2 Q8CES0; E9QMB7; B2RXP7; B7ZWG0 N-alpha-acetyltransferase 30 OS=Mus musculus OX=10090 GN=Naa30 PE=1 SV=2; N-alpha-acetyltransferase 30 OS=Mus musculus OX=10090 GN=Naa30 PE=1 SV=1; Nat12 protein OS=Mus musculus OX=10090 GN=Naa30 PE=2 SV=1; Nat12 protein OS=Mus musculus OX=10090 GN=Naa30 PE=2 SV=1 0 2 2 0.5347 0 1 1 1 566.27826 1131.54924 1131.54795 1.14 0.00065 0/0 0 0 4986056 HCD 30 MS2 15.65839 289.4 110 29.6916 5750 5750 5744 QEplus033719.raw F4 325.3 207.3 299.2 291 295.9 317.8 48 3.31 1 FALSE 1.14E-05 7.92E-05 0.876 -250 11132 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGHEEQQRR [K].lGHEEQQRR.[L] N-Term(TMT6plex) 3 Q3TE95 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rcn2 PE=2 SV=1 Q3TE95; Q8BP39; Q8BP92 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rcn2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rcn2 PE=2 SV=1; Reticulocalbin-2 OS=Mus musculus OX=10090 GN=Rcn2 PE=1 SV=1 1 3 3 0.6925 0 1 1 1 461.25522 1381.7511 1381.74978 0.96 0.00044 0/0 0 0 4519423 HCD 30 MS2 7.813637 268 110 29.6941 5751 5751 5744 QEplus033719.raw F4 341.9 173.6 279.4 266.2 319.7 227.2 316 3.87 1 FALSE 1.14E-05 7.17E-08 1.455 -250 11141 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPGASVHDR [R].gPGASVHDR.[N] N-Term(TMT6plex) 10 Q9Z1R2 Large proline-rich protein BAG6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1 G3UXT8; G3UYZ0; Q3TDL4; A0A1B0GX81; G3V013; Q9Z1R2; G3UZT6; G3UYQ2; Q3UF95; Q8HWH4 BCL2-associated athanogene 6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; Large proline-rich protein BAG6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=8; BCL2-associated athanogene 6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; Large proline-rich protein BAG6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=9; Large proline-rich protein BAG6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=2 SV=1 0 3 3 0.7413 0 1 1 1 375.5386 1124.60126 1124.60099 0.24 0.00009 0/0 0 0 3494616.75 HCD 30 MS2 32.81944 238.9 110 29.6965 5752 5752 5744 QEplus033719.raw F4 288.5 125.1 301.5 227.6 316.6 174.1 129 4.33 1 FALSE 1.14E-05 1.04E-06 1.234 -250 11152 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGMDDDRGPR [R].rGMDDDRGPR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 2 2 2 0.6502 0 1 1 1 702.35364 1403.7 1403.70111 -0.79 -0.00056 0/0 0 0 1240475.625 HCD 30 MS2 0 17.3 110 29.7015 5754 5754 5744 QEplus033719.raw F4 20.1 13.6 18.2 12.9 20.1 18.6 106 2.63 1 FALSE 0.0002218 0.004536 0.513 -250 11157 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEGAAAAER [K].sEGAAAAER.[G] N-Term(TMT6plex) 5 A2AI52 Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus OX=10090 GN=Usp8 PE=1 SV=1 A2AI52; Q3UQ26; Q3TQM7; Q3UZ62; Q80U87 Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus OX=10090 GN=Usp8 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Mus musculus OX=10090 GN=Usp8 PE=2 SV=1; Rhodanese domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Usp8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Usp8 PE=2 SV=1; Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus OX=10090 GN=Usp8 PE=1 SV=2 0 2 2 0.4433 0 1 1 1 545.78821 1090.56914 1090.56902 0.11 0.00006 0/0 0 0 3105813.75 HCD 30 MS2 18.10645 201.5 110 29.7089 5756 5756 5755 QEplus033719.raw F4 271.3 153 215.4 175.4 235.8 157.9 163 2.91 1 FALSE 1.14E-05 1.76E-05 1.001 -250 11168 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRDELNR [R].qRDELNR.[A] N-Term(TMT6plex) 8 Q5SW18 Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1 Q3UGR6; Q3TIK0; Q5SW18; Q5SW16; Q3UH92; Q3TUH5; P63005-2; Q3TJG1 Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1; Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1; Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1; Platelet-activating factor acetylhydrolase IB subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Pafah1b1 PE=1 SV=1; Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1; LisH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1; Isoform 2 of Platelet-activating factor acetylhydrolase IB subunit beta OS=Mus musculus OX=10090 GN=Pafah1b1; Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1 1 3 3 0.2253 0 1 1 1 387.21805 1159.63959 1159.6381 1.29 0.0005 0/0 0 0 51440404 HCD 30 MS2 14.50298 262.9 19.785 29.7159 5759 5759 5755 QEplus033719.raw F4 290.8 204.4 250.5 264.3 349.2 218.2 252 2.53 1 FALSE 0.002636 0.05235 0.135 -250 11176 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDNNAVDDR [K].gDNNAVDDR.[G] N-Term(TMT6plex) 5 D3YWT0 Signal peptidase complex catalytic subunit SEC11 OS=Mus musculus OX=10090 GN=Sec11a PE=1 SV=1 D3YWT0; D3YTS1; Q6PET3; Q9R0P6; D3Z569 Signal peptidase complex catalytic subunit SEC11 OS=Mus musculus OX=10090 GN=Sec11a PE=1 SV=1; Signal peptidase complex catalytic subunit SEC11 OS=Mus musculus OX=10090 GN=Sec11a PE=1 SV=1; Signal peptidase complex catalytic subunit SEC11 (Fragment) OS=Mus musculus OX=10090 GN=Sec11a PE=2 SV=1; Signal peptidase complex catalytic subunit SEC11A OS=Mus musculus OX=10090 GN=Sec11a PE=1 SV=1; Signal peptidase complex catalytic subunit SEC11 OS=Mus musculus OX=10090 GN=Sec11a PE=1 SV=1 0 2 2 0.5503 0 1 1 1 602.79211 1204.57695 1204.57556 1.16 0.0007 0/0 0 0 13022116 HCD 30 MS2 7.881648 502.4 110 29.7184 5760 5760 5755 QEplus033719.raw F4 512.8 412.3 542.7 428.2 645.9 472.6 52 3.18 1 FALSE 1.14E-05 5.25E-06 1.101 -250 11192 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQQPTSASER [R].eQQPTSASER.[Q] N-Term(TMT6plex) 5 Q7M739 Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1 Q8BIX0; Q7M739; F6ZDS4; Q91ZA5; Q3UVR0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nuclear pore complex-associated intranuclear protein TPR (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1 0 2 2 0.6354 0 1 1 1 681.34735 1361.68743 1361.68584 1.17 0.00079 0/0 0 0 8760778 HCD 30 MS2 2.374876 244.7 110 29.7257 5763 5763 5755 QEplus033719.raw F4 263.4 247.6 254.2 157.4 331.8 213.9 129 3.62 1 FALSE 1.14E-05 3.31E-08 1.518 -250 11200 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QESNEYR [K].qESNEYR.[R] N-Term(TMT6plex) 8 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.7925 0 1 1 1 577.78613 1154.56499 1154.56393 0.92 0.00053 0/0 0 0 8496731 HCD 30 MS2 3.42994 694.8 110 29.7282 5764 5764 5755 QEplus033719.raw F4 740.4 672.9 722.7 595.4 892 545.3 63 2.41 2 FALSE 0.001117 0.01469 0.336 -250 11203 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVPEDERR [R].rVPEDERR.[F] N-Term(TMT6plex) 3 Q9D338 "39S ribosomal protein L19, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl19 PE=1 SV=1" Q9D338; Q6P8U3; Q3URF5 "39S ribosomal protein L19, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl19 PE=1 SV=1; Mitochondrial ribosomal protein L19 OS=Mus musculus OX=10090 GN=Mrpl19 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mrpl19 PE=2 SV=1" 2 3 3 0.3718 0 1 1 1 429.24423 1285.71814 1285.71741 0.57 0.00024 0/0 0 0 6570790 HCD 30 MS2 34.70425 277.2 110 29.7307 5765 5765 5755 QEplus033719.raw F4 435.8 158.4 246.6 276.9 324 221.7 275 3.55 1 FALSE 0.0006574 0.01002 0.404 -250 11210 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YGEDNR [R].yGEDNR.[G] N-Term(TMT6plex) 4 Q8BQ46 "TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1" Q3V452; Q8BQ46; Q3V2Z2; Q3TLE4 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Taf15 PE=2 SV=1; TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Taf15 PE=2 SV=1" 0 2 2 0.7415 0 1 1 1 491.74377 982.48027 982.47914 1.15 0.00057 0/0 0 0 13092557 HCD 30 MS2 35.64083 566.2 97.324 29.738 5767 5767 5766 QEplus033719.raw F4 594.4 550.1 586.6 464 755.9 446.4 37 2.36 1 FALSE 0.006267 0.1017 0.002 -250 11231 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAAAGPQGQHEER [R].eAAAGPQGQHEER.[L] N-Term(TMT6plex) 3 B2RWW1 Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=2 SV=1 B2RWW1; A0A1D5RLY6; Q8C052 Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=2 SV=1; Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=1 SV=1; Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=1 SV=2 0 3 3 0.7983 0 1 1 1 536.93622 1608.7941 1608.79276 0.83 0.00045 0/0 0 0 4932377 HCD 30 MS2 3.155846 126.9 110 29.7455 5770 5770 5766 QEplus033719.raw F4 153.4 87.1 131.7 144.3 107.7 137.2 126 5.9 1 FALSE 1.14E-05 4.64E-13 2.44 -250 11236 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEGPGAQR [R].eAEGPGAQR.[A] N-Term(TMT6plex) 4 Q6ZPU9 KIF-binding protein OS=Mus musculus OX=10090 GN=Kifbp PE=1 SV=2 E0CXN7; Q6ZPU9; Q6ZPU9-2; H3BIY2 KIF-binding protein OS=Mus musculus OX=10090 GN=Kifbp PE=1 SV=1; KIF-binding protein OS=Mus musculus OX=10090 GN=Kifbp PE=1 SV=2; Isoform 2 of KIF-binding protein OS=Mus musculus OX=10090 GN=Kifbp; KIF-binding protein OS=Mus musculus OX=10090 GN=Kifbp PE=1 SV=1 0 2 2 0.5352 0 1 1 1 572.30182 1143.59636 1143.59557 0.69 0.0004 0/0 0 0 4712686 HCD 30 MS2 10.48353 305.4 110 29.748 5771 5771 5766 QEplus033719.raw F4 339.6 252.7 275.3 280.2 431.8 253.1 108 2.56 1 FALSE 1.14E-05 3.87E-06 1.126 -250 11246 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDDDEEEAAR [R].nDDDEEEAAR.[E] N-Term(TMT6plex) 9 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; E9QA15; E9Q0M9; D3Z6I7; S4R1T7; E9Q9F3; Q7TMN5; E9QA16; Q3TUS1 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Cald1 protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1 0 2 2 0.934 0 1 1 1 696.80811 1392.60893 1392.60765 0.92 0.00064 0/0 0 0 2500806.5 HCD 30 MS2 0 170.1 110 29.753 5773 5773 5766 QEplus033719.raw F4 159 166.4 180.9 103.4 260.7 150.1 5 4.09 1 FALSE 1.14E-05 1.15E-05 1.036 -250 11248 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASGHPGDPESQQR [K].aSGHPGDPESQQR.[L] N-Term(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.8342 0 1 1 1 797.89215 1594.77703 1594.77711 -0.05 -0.00004 0/0 0 0 2102817 HCD 30 MS2 0 37 110 29.7555 5774 5774 5766 QEplus033719.raw F4 55.9 23.7 29.6 30.2 69.8 12.9 117 3.68 1 FALSE 1.14E-05 1.32E-09 1.784 -250 11256 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEEGVRR [R].eAEEGVRR.[K] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.1418 0 1 1 1 587.82233 1174.63738 1174.63777 -0.33 -0.00019 0/0 0 0 1029526.938 HCD 30 MS2 38.38538 92.9 110 29.7605 5776 5776 5766 QEplus033719.raw F4 109.9 77.5 92.9 86.1 107.9 83.1 331 1.41 2 FALSE 0.001318 0.01813 0.298 -250 11264 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEPAAR [R].eAEPAAR.[E] N-Term(TMT6plex) 1 Q3TIX9 U4/U6.U5 tri-snRNP-associated protein 2 OS=Mus musculus OX=10090 GN=Usp39 PE=1 SV=2 Q3TIX9 U4/U6.U5 tri-snRNP-associated protein 2 OS=Mus musculus OX=10090 GN=Usp39 PE=1 SV=2 0 2 2 0.4807 0 1 1 1 486.76965 972.53203 972.53118 0.88 0.00043 0/0 0 0 8275218.5 HCD 30 MS2 4.43195 419.6 110 29.7678 5778 5778 5777 QEplus033719.raw F4 517.4 372.2 470 346 462.4 349.4 103 2.33 1 FALSE 0.001335 0.0185 0.295 -250 11283 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMEEEER [R].rMEEEER.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.303 0 1 1 1 403.20331 1207.59537 1207.59385 1.26 0.00051 0/0 0 0 16911388 HCD 30 MS2 38.16413 314.4 46.828 29.7748 5781 5781 5777 QEplus033719.raw F4 588.6 187.8 291.3 228.7 267.5 322.3 108 3.3 2 FALSE 0.0002909 0.006043 0.478 -250 11331 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVAGTR [K].nVAGTR.[T] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.1277 0 1 1 1 423.75348 846.49968 846.49948 0.24 0.0001 0/0 0 0 4133650.25 HCD 30 MS2 38.66302 362.4 110 29.7971 5789 5789 5788 QEplus033719.raw F4 814.6 106.1 331.1 324.9 225.9 371.7 59 1.88 2 FALSE 0.003338 0.06473 0.101 -250 11341 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANAPSCDR [K].aNAPScDR.[L] N-Term(TMT6plex); C6(Carbamidomethyl) 13 A0A4Y5WWJ7 Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1 E9Q405; Q9JMH9-6; A0A1C7ZN10; E9QAX2; Q9JMH9-5; Q9JMH9-4; Q9JMH9-1; B2RRE2; A0A4Y5WWJ7; Q9JMH9-2; K3W4L0; Q9JMH9-7; Q9JMH9 Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 6 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 5 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Isoform 4 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Isoform 1 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Myo18a protein OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1; Isoform 2 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 7 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=2 0 2 2 0.681 0 1 1 1 560.27484 1119.54241 1119.54142 0.88 0.00049 0/0 0 0 2330344.75 HCD 30 MS2 0 111.2 110 29.7996 5790 5790 5788 QEplus033719.raw F4 120.1 56.5 120.5 137.5 78.2 154.2 53 2.79 1 FALSE 1.14E-05 0.000479 0.726 -250 11365 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGSGGVASSSESNRDR [K].tGSGGVASSSESNRDR.[R] N-Term(TMT6plex) 5 G3UVU2 Splicing factor 3A subunit 2 OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=1 Q7TN25; D3YW09; G3UVU2; D3Z5A6; Q62203 Sf3a2 protein OS=Mus musculus OX=10090 GN=Sf3a2 PE=2 SV=1; Splicing factor 3A subunit 2 OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=1; Splicing factor 3A subunit 2 OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=1; Splicing factor 3A subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=1; Splicing factor 3A subunit 2 OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=2 1 3 3 0.7125 0 1 1 1 599.2973 1795.87735 1795.8732 2.31 0.00139 0/0 0 0 1729236.25 HCD 30 MS2 12.66007 76.2 110 29.8071 5793 5793 5788 QEplus033719.raw F4 81.3 68.2 85.6 64.8 81 76.2 126 4 1 FALSE 1.14E-05 3.71E-11 2.079 -250 11370 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAEQGGTPTR [K].tAEQGGTPTR.[Y] N-Term(TMT6plex) 5 B1ART2 Vacuolar protein sorting 13D OS=Mus musculus OX=10090 GN=Vps13d PE=1 SV=2 B1ART2; V9GX23; B1ART1; F6XI52; Q6A066 Vacuolar protein sorting 13D OS=Mus musculus OX=10090 GN=Vps13d PE=1 SV=2; Vacuolar protein sorting 13D (Fragment) OS=Mus musculus OX=10090 GN=Vps13d PE=1 SV=1; Vacuolar protein sorting 13D OS=Mus musculus OX=10090 GN=Vps13d PE=1 SV=1; Vacuolar protein sorting 13D (Fragment) OS=Mus musculus OX=10090 GN=Vps13d PE=1 SV=1; MKIAA0453 protein (Fragment) OS=Mus musculus OX=10090 GN=Vps13d PE=2 SV=1 0 2 2 0.5139 0 1 1 1 623.83472 1246.66216 1246.65889 2.62 0.00163 0/0 0 0 1294546 HCD 30 MS2 0 95.9 110 29.8096 5794 5794 5788 QEplus033719.raw F4 108 67.6 91 100.8 112.7 95.3 286 2.51 1 FALSE 1.14E-05 1.41E-05 1.019 -250 11375 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETPTSHSDPR [K].eTPTSHSDPR.[L] N-Term(TMT6plex) 5 Q8BZ53 USP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Usp28 PE=2 SV=1 Q8BZ53; Q5I043; Q8BMT7; A0A1L1SUC4; Q5I043-2 USP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Usp28 PE=2 SV=1; Ubiquitin carboxyl-terminal hydrolase 28 OS=Mus musculus OX=10090 GN=Usp28 PE=1 SV=1; USP domain-containing protein OS=Mus musculus OX=10090 GN=Usp28 PE=2 SV=1; Ubiquitin carboxyl-terminal hydrolase 28 (Fragment) OS=Mus musculus OX=10090 GN=Usp28 PE=1 SV=1; Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 28 OS=Mus musculus OX=10090 GN=Usp28 0 3 3 0.6403 0 1 1 1 452.56281 1355.67386 1355.67527 -1.04 -0.00047 0/0 0 0 1213839.875 HCD 30 MS2 46.82905 151.3 110 29.8121 5795 5795 5788 QEplus033719.raw F4 254.9 102.1 146.6 118.2 134.1 151.8 110 3.03 1 FALSE 0.002064 0.03807 0.182 -250 11400 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QYGSEGR [R].qYGSEGR.[F] N-Term(TMT6plex) 8 Q99KF1; Q8R1V4 Transmembrane emp24 domain-containing protein 9 OS=Mus musculus OX=10090 GN=Tmed9 PE=1 SV=2;Transmembrane emp24 domain-containing protein 4 OS=Mus musculus OX=10090 GN=Tmed4 PE=1 SV=1 Q99KF1; Q8BLM5; Q3TFU8; A0A286YDS5; Q9CZL0; Q5SVW9; Q8R1V4; Q3U7N8 Transmembrane emp24 domain-containing protein 9 OS=Mus musculus OX=10090 GN=Tmed9 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmed9 PE=2 SV=1; GOLD domain-containing protein OS=Mus musculus OX=10090 GN=Tmed9 PE=2 SV=1; Transmembrane emp24 domain-containing protein 9 OS=Mus musculus OX=10090 GN=Tmed9 PE=1 SV=1; GOLD domain-containing protein OS=Mus musculus OX=10090 GN=Tmed9 PE=2 SV=1; Transmembrane emp24 domain-containing protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Tmed4 PE=1 SV=1; Transmembrane emp24 domain-containing protein 4 OS=Mus musculus OX=10090 GN=Tmed4 PE=1 SV=1; GOLD domain-containing protein OS=Mus musculus OX=10090 GN=Tmed9 PE=2 SV=1 0 2 2 0.3852 0 1 1 1 513.26501 1025.52275 1025.52134 1.38 0.00071 0/0 0 0 6678763 HCD 30 MS2 10.91957 492.3 110 29.8294 5801 5801 5799 QEplus033719.raw F4 527.5 411.3 503 500.6 568.7 442.6 88 2.7 2 FALSE 0.0002218 0.004684 0.509 -250 11408 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHAAIR [KR].aHAAIR.[EG-] N-Term(TMT6plex) 4 P47962 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3 Q3THE1; P47962; Q3TKR5; Q3U850 Ribosomal_L18_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3; Ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; Ribosomal_L18_c domain-containing protein OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1 0 2 2 0.1567 0 1 1 1 434.27206 867.53685 867.5362 0.75 0.00033 0/0 0 0 15691077 HCD 30 MS2 39.42896 645.8 75.55 29.8339 5803 5803 5799 QEplus033719.raw F4 1048.5 406.7 772.5 556.6 386.2 704.6 16 2.17 1 FALSE 0.003658 0.06985 0.088 -250 11409 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHAALR [KR].aHAALR.[EG-] N-Term(TMT6plex) 1 G3X8Y9 Pituitary homeobox 2 OS=Mus musculus OX=10090 GN=Pitx2 PE=4 SV=1 0 2 2 0.1567 0 1 2 2 434.27206 867.53685 867.5362 0.75 0.00033 0/0 0 0 15691077 HCD 30 MS2 39.42896 645.8 75.55 29.8339 5803 5803 5799 QEplus033719.raw F4 1048.5 406.7 772.5 556.6 386.2 704.6 16 2.17 1 FALSE 0.003658 0.06985 0.088 -250 11423 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APPSSGSSSSSSSCSSR [K].aPPSSGSSSSSSScSSR.[K] N-Term(TMT6plex); C14(Carbamidomethyl) 1 Q5U4C3 "Splicing factor, arginine/serine-rich 19 OS=Mus musculus OX=10090 GN=Scaf1 PE=1 SV=1" Q5U4C3 "Splicing factor, arginine/serine-rich 19 OS=Mus musculus OX=10090 GN=Scaf1 PE=1 SV=1" 0 3 3 0.8534 0 1 1 1 615.28119 1843.82901 1843.82895 0.03 0.00002 0/0 0 0 855709.3125 HCD 30 MS2 13.49599 20 110 29.8412 5806 5806 5799 QEplus033719.raw F4 15.8 20 23.3 17.1 24.1 19.8 29 4.57 1 FALSE 1.14E-05 6.32E-11 2.035 -250 11431 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGNPGGPGSER [R].dGNPGGPGSER.[G] N-Term(TMT6plex) 1 Q9JHE7 Protein TSSC4 OS=Mus musculus OX=10090 GN=Tssc4 PE=1 SV=1 Q9JHE7 Protein TSSC4 OS=Mus musculus OX=10090 GN=Tssc4 PE=1 SV=1 0 2 2 0.6452 0 1 1 1 636.31464 1271.622 1271.61776 3.33 0.00212 0/0 0 0 644008.375 HCD 30 MS2 0 39.6 110 29.8437 5807 5807 5799 QEplus033719.raw F4 40.4 36.2 36.5 28.2 58 38 79 2.79 1 FALSE 1.14E-05 1.55E-06 1.201 -250 11443 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RHPVVAGGSGEGR [K].rHPVVAGGSGEGR.[K] N-Term(TMT6plex) 3 Z4YJT3 La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1 PE=1 SV=1 Z4YJT3; Q6ZQ58-2; Q6ZQ58 La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1 PE=1 SV=1; Isoform 2 of La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1; La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1 PE=1 SV=3 1 3 3 0.5248 0 1 1 1 503.28122 1507.82911 1507.82909 0.01 0.00001 0/0 0 0 4066953.75 HCD 30 MS2 53.19614 219.5 110 29.8487 5809 5809 5799 QEplus033719.raw F4 264.2 175.2 259.7 172 265.1 181 393 2.42 1 FALSE 0.001744 0.02972 0.218 -250 11450 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGSRGEEEAGQEEGGSR [K].eGSRGEEEAGQEEGGSR.[R] N-Term(TMT6plex) 8 Q4JG03 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1 F6XP90; Q7TMY8-4; Q4JG03; Q7TMY8-3; Q7TMY8; Q7TMY8-2; A2AFQ0; Q8BKX3 E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=1; Isoform 4 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; Isoform 3 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=5; Isoform 2 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=1; UBA domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1 1 3 3 0.7763 0 1 1 1 664.97394 1992.90726 1992.90562 0.82 0.00055 0/0 0 0 3126958.5 HCD 30 MS2 42.23573 86.8 110 29.8562 5811 5811 5810 QEplus033719.raw F4 142.3 55.6 97 77.9 60.9 87.3 41 4.56 1 FALSE 1.14E-05 3.75E-10 1.888 -250 11473 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGESMQPNR [R].rGESMQPNR.[R] N-Term(TMT6plex) 2 Q9Z1D1 Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=1 SV=2 Q9Z1D1; Q3THA0 Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=1 SV=2; Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=2 SV=1 1 3 3 0.4167 0 1 1 1 435.22952 1303.67401 1303.67383 0.14 0.00006 0/0 0 0 13886728 HCD 30 MS2 32.12109 243.2 68.137 29.8632 5814 5814 5810 QEplus033719.raw F4 289.4 177.3 261.7 212.6 253.1 265 188 3.84 1 FALSE 1.14E-05 6.65E-06 1.081 -250 11479 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HADQEIR [R].hADQEIR.[L] N-Term(TMT6plex) 6 Q8C2S9 Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1 Q8C2S9; Q3U7S9; Q9EQK5; E9Q3X0; D3Z2N7; Q3THX5 Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=1 SV=4; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=1 SV=1; Major vault protein (Fragment) OS=Mus musculus OX=10090 GN=Mvp PE=1 SV=2; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1 0 3 3 0.4085 0 1 1 1 366.53519 1097.59101 1097.59009 0.84 0.00031 0/0 0 0 6310058 HCD 30 MS2 28.8383 213.8 110 29.8657 5815 5815 5810 QEplus033719.raw F4 289.7 99.5 270.8 230.9 173.4 218.7 153 3.77 1 FALSE 1.14E-05 3.34E-05 0.948 -250 11487 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDRVPPSR [R].qDRVPPSR.[N] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 1 3 3 0.5188 0 1 1 1 395.2305 1183.67694 1183.67449 2.08 0.00082 0/0 0 0 3713938.5 HCD 30 MS2 51.01177 269 110 29.8682 5816 5816 5810 QEplus033719.raw F4 337.6 189.1 323.1 272 214.8 277.1 228 2.93 3 FALSE 1.14E-05 0.0002929 0.767 -250 11503 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSGGGSSGGSIGGR [R].gSGGGSSGGSIGGR.[G] N-Term(TMT6plex) 1 P04264 "SWISS-PROT:P04264 Tax_Id=9606 Gene_Symbol=KRT1 Keratin, type II cytoskeletal 1" P04264 "SWISS-PROT:P04264 Tax_Id=9606 Gene_Symbol=KRT1 Keratin, type II cytoskeletal 1" 0 2 2 0.7393 0 1 1 1 661.33716 1321.66704 1321.66577 0.96 0.00063 0/0 0 0 1794901.375 HCD 30 MS2 0 130.9 110 29.8757 5819 5819 5810 QEplus033719.raw F4 140.5 123.3 72.3 176.1 164.6 108.7 144 4.22 1 TRUE 1.14E-05 2.21E-15 2.881 -250 11510 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSTITSR [K].rSTITSR.[E] N-Term(TMT6plex) 18 Q64475; Q64525 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3;Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64475; Q8CGP2; Q64525; Q64524; Q8CGP1; P10854; A0JNS9; Q64478; Q8C622; P70696; Q9D2U9; Q8CGP2-2; Q8CBB6; Q6ZWY9; Q8CGP0; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 2-E OS=Mus musculus OX=10090 GN=H2bc21 PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone domain-containing protein OS=Mus musculus OX=10090 GN=H2bc22 PE=2 SV=1; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Histone H2B type 3-A OS=Mus musculus OX=10090 GN=Hist3h2ba PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3; Histone H2B type 3-B OS=Mus musculus OX=10090 GN=H2bu1 PE=1 SV=3; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 1 3 3 0.5095 0 1 1 1 350.54764 1049.62836 1049.62647 1.8 0.00063 0/0 0 0 68565264 HCD 30 MS2 2.503947 181.4 16.572 29.8856 5822 5822 5821 QEplus033719.raw F4 333.8 135 190.2 149 157.2 123.1 79 3.69 2 FALSE 0.001694 0.02785 0.228 -250 11527 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HADQEIR [R].hADQEIR.[L] N-Term(TMT6plex) 6 Q8C2S9 Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1 Q8C2S9; Q3U7S9; Q9EQK5; E9Q3X0; D3Z2N7; Q3THX5 Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=1 SV=4; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=1 SV=1; Major vault protein (Fragment) OS=Mus musculus OX=10090 GN=Mvp PE=1 SV=2; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1 0 2 2 0.3511 0 1 1 1 549.30017 1097.59307 1097.59009 2.71 0.00149 0/0 0 0 2539203.75 HCD 30 MS2 22.47839 187.5 110 29.8956 5826 5826 5821 QEplus033719.raw F4 228.5 102.4 202.7 245.1 162.1 184.3 155 2.62 1 FALSE 4.43E-05 0.001708 0.613 -250 11536 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGESMQPNR [R].rGESMQPNR.[R] N-Term(TMT6plex) 2 Q9Z1D1 Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=1 SV=2 Q9Z1D1; Q3THA0 Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=1 SV=2; Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=2 SV=1 1 2 2 0.4637 0 1 1 1 652.34113 1303.67497 1303.67383 0.88 0.00057 0/0 0 0 1773328.75 HCD 30 MS2 0 42.3 110 29.8981 5827 5827 5821 QEplus033719.raw F4 47.4 35.9 40.9 30.7 59.8 38.8 197 2.48 1 FALSE 0.0004191 0.007436 0.45 -250 11553 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSNSEMTSR [K].nSNSEMTSR.[V] N-Term(TMT6plex) 1 Q9ERU9 E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 Q9ERU9 E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 0 2 2 0.5399 0 1 1 1 627.80591 1254.60454 1254.59458 7.94 0.00498 0/0 0 0 411797.8125 HCD 30 MS2 0 32.1 110 29.9031 5829 5829 5821 QEplus033719.raw F4 43.9 24.7 33.8 21.5 45.4 23.5 76 1.63 1 FALSE 0.009687 0.1878 -0.124 -250 11558 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSVGPSR [R].nSVGPSR.[L] N-Term(TMT6plex) 1 Q9D832 DnaJ homolog subfamily B member 4 OS=Mus musculus OX=10090 GN=Dnajb4 PE=1 SV=1 Q9D832 DnaJ homolog subfamily B member 4 OS=Mus musculus OX=10090 GN=Dnajb4 PE=1 SV=1 0 2 2 0.2827 0 1 1 1 473.26981 945.53234 945.53151 0.87 0.00041 0/0 0 0 2253016.25 HCD 30 MS2 55.6654 241.4 110 29.9056 5830 5830 5821 QEplus033719.raw F4 333.4 170.8 253.4 210 256.9 223.9 127 2.37 1 FALSE 0.0001187 0.003173 0.552 -250 11574 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGGEDDGEDQSAGAR [R].aGGEDDGEDQSAGAR.[C] N-Term(TMT6plex) 1 Q8BIF9 Zinc finger protein 787 OS=Mus musculus OX=10090 GN=Znf787 PE=2 SV=3 Q8BIF9 Zinc finger protein 787 OS=Mus musculus OX=10090 GN=Znf787 PE=2 SV=3 0 2 2 0.802 0 1 1 1 832.37286 1663.73845 1663.7357 1.65 0.00137 0/0 0 0 1793688.625 HCD 30 MS2 0 60.9 110 29.9154 5833 5833 5832 QEplus033719.raw F4 57.4 66.2 68 42.1 76.7 54.8 25 4.95 1 FALSE 1.14E-05 6.31E-16 3.312 -250 11579 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAAAGPQGQHEER [R].eAAAGPQGQHEER.[L] N-Term(TMT6plex) 3 B2RWW1 Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=2 SV=1 B2RWW1; A0A1D5RLY6; Q8C052 Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=2 SV=1; Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=1 SV=1; Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=1 SV=2 0 2 2 0.6122 0 1 1 1 804.90198 1608.79668 1608.79276 2.43 0.00196 0/0 0 0 1045402.625 HCD 30 MS2 0 34.2 110 29.918 5834 5834 5832 QEplus033719.raw F4 27.2 28 41.3 38 29.7 40.7 146 3.92 1 FALSE 1.14E-05 2.40E-10 1.925 -250 11596 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTCPCDTR [K].gTcPcDTR.[L] N-Term(TMT6plex); C3(Carbamidomethyl); C5(Carbamidomethyl) 6 E9Q1X8 Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Mus musculus OX=10090 GN=Cacna2d1 PE=1 SV=2 O08532-3; E9Q1X8; O08532-2; O08532; A0A411ACY8; O08532-4 Isoform 2C of Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Mus musculus OX=10090 GN=Cacna2d1; Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Mus musculus OX=10090 GN=Cacna2d1 PE=1 SV=2; Isoform 2B of Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Mus musculus OX=10090 GN=Cacna2d1; Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Mus musculus OX=10090 GN=Cacna2d1 PE=1 SV=1; Voltage-dependent calcium channel alpha2/delta-1 transcript variant 2 OS=Mus musculus OX=10090 GN=Cacna2d1 PE=2 SV=1; Isoform 2D of Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Mus musculus OX=10090 GN=Cacna2d1 0 2 2 0.4711 0 1 1 1 598.27423 1195.54119 1195.53971 1.24 0.00074 0/0 0 0 9592211 HCD 30 MS2 4.482304 442.2 110 29.925 5837 5837 5832 QEplus033719.raw F4 464.4 229.7 447.1 668.4 248.5 595.2 14 2.42 1 FALSE 0.001591 0.02495 0.245 -250 11602 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRDNQDREENDK [K].dRDNQDREENDk.[D] N-Term(TMT6plex); K12(TMT6plex) 1 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 2 4 4 0.559 0 1 1 1 498.75058 1991.98049 1991.97828 1.11 0.00055 0/0 0 0 7222652.5 HCD 30 MS2 8.540917 297.1 110 29.9275 5838 5838 5832 QEplus033719.raw F4 580.7 153.4 311.4 240.4 212.7 283.9 162 3.56 1 FALSE 1.14E-05 6.85E-06 1.079 -250 11629 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEEYQR [K].nEEYQR.[S] N-Term(TMT6plex) 4 E9Q5K9 YTH domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ythdc1 PE=1 SV=2 E9Q5K9; D6RG95; E9Q5K9-2; E9Q5K9-3 YTH domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ythdc1 PE=1 SV=2; YTH domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ythdc1 PE=1 SV=1; Isoform 2 of YTH domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ythdc1; Isoform 3 of YTH domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ythdc1 0 2 2 0.251 0 1 1 1 534.27002 1067.53276 1067.5319 0.8 0.00043 0/0 0 0 2252672 HCD 30 MS2 0 208.3 110 29.9375 5842 5842 5832 QEplus033719.raw F4 235.6 154 217.2 162.1 298.3 182.8 89 2.47 1 FALSE 0.002956 0.05755 0.121 -250 11660 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAEYQR [K].nAEYQR.[K] N-Term(TMT6plex) 5 P70336 Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1 Q3UMT5; P70336; A0A1Y7VMN0; P70336-2; F8VPK5 Rho-associated protein kinase 2 (Fragment) OS=Mus musculus OX=10090 GN=Rock2 PE=2 SV=1; Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1; Rho-associated protein kinase 2 (Fragment) OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1; Isoform 2 of Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2; Rho-associated protein kinase OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1 0 2 2 0.5115 0 1 1 1 505.26752 1009.52776 1009.52642 1.32 0.00067 0/0 0 0 8295792 HCD 30 MS2 10.69679 429.6 110 29.952 5847 5847 5843 QEplus033719.raw F4 471.6 362.9 436.4 413.2 558.8 334.6 123 2.6 1 FALSE 0.001567 0.0238 0.252 -250 11701 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSGGGSSGGSIGGR [R].gSGGGSSGGSIGGR.[G] N-Term(TMT6plex) 1 P04264 "SWISS-PROT:P04264 Tax_Id=9606 Gene_Symbol=KRT1 Keratin, type II cytoskeletal 1" P04264 "SWISS-PROT:P04264 Tax_Id=9606 Gene_Symbol=KRT1 Keratin, type II cytoskeletal 1" 0 3 3 0.7395 0 1 1 1 441.22623 1321.66413 1321.66577 -1.24 -0.00055 0/0 0 0 3304528.5 HCD 30 MS2 25.97652 198.8 110 29.9645 5852 5852 5843 QEplus033719.raw F4 315.5 127.5 206.3 186.8 191.4 165.1 148 4.99 1 TRUE 1.14E-05 3.43E-10 1.895 -250 11709 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDRGPPQRPR [R].dDRGPPQRPR.[L] N-Term(TMT6plex) 8 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 4 4 0.4988 0 1 1 1 356.44998 1422.7781 1422.77632 1.25 0.00044 0/0 0 0 2986117.25 HCD 30 MS2 14.3757 179.7 110 29.967 5853 5853 5843 QEplus033719.raw F4 212.9 144.9 199.3 138.2 204.4 178.3 365 4.21 1 FALSE 1.14E-05 2.25E-06 1.171 -250 11723 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGSESSVDR [K].tGSESSVDR.[L] N-Term(TMT6plex) 3 Q9QXK3 Coatomer subunit gamma-2 OS=Mus musculus OX=10090 GN=Copg2 PE=1 SV=1 Q9QXK3-3; Q9QXK3; Q9QXK3-4 Isoform 3 of Coatomer subunit gamma-2 OS=Mus musculus OX=10090 GN=Copg2; Coatomer subunit gamma-2 OS=Mus musculus OX=10090 GN=Copg2 PE=1 SV=1; Isoform 4 of Coatomer subunit gamma-2 OS=Mus musculus OX=10090 GN=Copg2 0 2 2 0.5175 0 1 1 1 583.79688 1166.58647 1166.58506 1.21 0.00071 0/0 0 0 6281956.5 HCD 30 MS2 3.841805 273.2 110 29.9768 5856 5856 5854 QEplus033719.raw F4 341 208.7 305.5 284.2 247.4 252.4 126 3.15 1 FALSE 1.14E-05 5.57E-05 0.906 -250 11747 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGASGSSMR [R].eGASGSSMR.[S] N-Term(TMT6plex) 2 Q8BYY4 Tetratricopeptide repeat protein 39B OS=Mus musculus OX=10090 GN=Ttc39b PE=1 SV=1 Q8BYY4; Q8BYY4-2 Tetratricopeptide repeat protein 39B OS=Mus musculus OX=10090 GN=Ttc39b PE=1 SV=1; Isoform 2 of Tetratricopeptide repeat protein 39B OS=Mus musculus OX=10090 GN=Ttc39b 0 2 2 0.4502 0 1 1 1 555.77502 1110.54277 1110.54109 1.52 0.00084 0/0 0 0 3526613.75 HCD 30 MS2 59.72191 233.9 110 29.9843 5859 5859 5854 QEplus033719.raw F4 252.5 203.5 227 223.1 292.7 204.3 85 2.31 1 FALSE 0.001576 0.024 0.251 -250 11760 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDRVPPSR [R].qDRVPPSR.[N] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 1 2 2 0.3061 0 1 1 1 592.34161 1183.67595 1183.67449 1.24 0.00073 0/0 0 0 2905618.5 HCD 30 MS2 20.99496 99.3 110 29.9893 5861 5861 5854 QEplus033719.raw F4 113.1 75.6 113.6 104.4 88.5 100.9 230 1.96 3 FALSE 0.006363 0.1028 -0.001 -250 11784 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENEEGCPER [K].eNEEGcPER.[A] N-Term(TMT6plex); C6(Carbamidomethyl) 1 Q8BGC0 HIV Tat-specific factor 1 homolog OS=Mus musculus OX=10090 GN=Htatsf1 PE=1 SV=1 Q8BGC0 HIV Tat-specific factor 1 homolog OS=Mus musculus OX=10090 GN=Htatsf1 PE=1 SV=1 0 2 2 0.7492 0 1 1 1 674.80438 1348.60149 1348.60006 1.06 0.00071 0/0 0 0 5047525 HCD 30 MS2 6.456983 186.5 110 30.0042 5866 5866 5865 QEplus033719.raw F4 189.7 179.2 171.9 141.4 260.3 176.8 15 2.95 1 FALSE 1.14E-05 9.31E-05 0.863 -250 11794 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDRGPPQRPR [R].dDRGPPQRPR.[L] N-Term(TMT6plex) 8 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 3 3 0.5185 0 1 1 1 474.93066 1422.77744 1422.77632 0.78 0.00037 0/0 0 0 7995492.5 HCD 30 MS2 33.81242 460.3 110 30.0114 5869 5869 5865 QEplus033719.raw F4 601.9 405.5 496.1 321.5 521 416 357 2.97 1 FALSE 0.0003211 0.006311 0.472 -250 11801 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPAHPVR [R].nPAHPVR.[G] N-Term(TMT6plex) 25 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5345 0 1 1 1 510.30103 1019.59477 1019.59478 0 0 0/0 0 0 3456386.75 HCD 30 MS2 35.35149 260.8 110 30.0139 5870 5870 5865 QEplus033719.raw F4 378.4 176.1 278 257.4 243.6 231.2 187 2.32 2 FALSE 0.0002119 0.004328 0.518 -250 11809 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPSNPDR [R].ePSNPDR.[L] N-Term(TMT6plex) 7 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 0 2 2 0.5 0 1 1 1 522.27112 1043.53496 1043.5319 2.93 0.00153 0/0 0 0 3266962.25 HCD 30 MS2 22.40943 305.8 110 30.0164 5871 5871 5865 QEplus033719.raw F4 384.4 227.2 319.3 270.9 324.3 309 88 2.32 1 FALSE 0.001108 0.01455 0.338 -250 11846 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAEGGENTTCER [K].dAEGGENTTcER.[L] N-Term(TMT6plex); C10(Carbamidomethyl) 2 Q6ZWQ0 Nesprin-2 OS=Mus musculus OX=10090 GN=Syne2 PE=1 SV=2 Q6ZWQ0; E9QP46 Nesprin-2 OS=Mus musculus OX=10090 GN=Syne2 PE=1 SV=2; Nesprin-2 OS=Mus musculus OX=10090 GN=Syne2 PE=1 SV=1 0 2 2 0.8157 0 1 1 1 784.3476 1567.68791 1567.68558 1.49 0.00117 0/0 0 0 1042373.5 HCD 30 MS2 9.536743 44.9 110 30.0363 5878 5878 5876 QEplus033719.raw F4 47.7 59.8 44.7 21.8 60.5 35 15 4.07 1 FALSE 1.14E-05 1.62E-12 2.337 -250 11861 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDASDRGR [R].mDASDRGR.[L] N-Term(TMT6plex) 7 P47738 "Aldehyde dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1" P47738; Q3TVM2; A0A0G2JEU1; Q3UJW1; D3YYF3; Q3U9J7; Q3U6I3 "Aldehyde dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1; Aldehyde dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1; Aldehyde dehydrogenase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1" 1 3 3 0.4364 0 1 1 1 379.52707 1136.56665 1136.56797 -1.16 -0.00044 0/0 0 0 9482936 HCD 30 MS2 28.66926 523 91.163 30.0431 5881 5881 5876 QEplus033719.raw F4 631 470.5 629.7 424.2 583.7 399 146 3.46 1 FALSE 1.14E-05 0.0001461 0.826 -250 11869 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQAAYR [K].qQAAYR.[N] N-Term(TMT6plex) 2 Q8BK67 Protein RCC2 OS=Mus musculus OX=10090 GN=Rcc2 PE=1 SV=1 Q8BK67; A2AWQ2 Protein RCC2 OS=Mus musculus OX=10090 GN=Rcc2 PE=1 SV=1; Protein RCC2 (Fragment) OS=Mus musculus OX=10090 GN=Rcc2 PE=1 SV=1 0 2 2 0.5185 0 1 1 1 483.2724 965.53752 965.5366 0.96 0.00046 0/0 0 0 6637526 HCD 30 MS2 16.83828 611.6 110 30.0456 5882 5882 5876 QEplus033719.raw F4 682.5 631.8 744.4 424.8 732.9 452.9 78 1.89 1 FALSE 0.004271 0.07844 0.066 -250 11877 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVTGNNSER [K].eVTGNNSER.[E] N-Term(TMT6plex) 1 Q3UFK8 FERM domain-containing protein 8 OS=Mus musculus OX=10090 GN=Frmd8 PE=1 SV=2 Q3UFK8 FERM domain-containing protein 8 OS=Mus musculus OX=10090 GN=Frmd8 PE=1 SV=2 0 2 2 0.5033 0 1 1 1 617.81415 1234.62102 1234.62251 -1.21 -0.00075 0/0 0 0 1100226.125 HCD 30 MS2 0 90.5 110 30.0506 5884 5884 5876 QEplus033719.raw F4 116.9 84.4 115.9 70.5 86.6 68.9 148 3.02 1 FALSE 1.14E-05 8.44E-07 1.251 -250 11893 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPEEEDQR [K].sPEEEDQR.[T] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.6812 0 1 1 1 609.79547 1218.58367 1218.57998 3.03 0.00184 0/0 0 0 758992.5625 HCD 30 MS2 28.10051 75.5 110 30.0556 5886 5886 5876 QEplus033719.raw F4 80.1 48.8 81.2 68.2 79.4 95.5 52 2.29 1 FALSE 0.001231 0.0166 0.314 -250 11907 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGPPPER [R].gGPPPER.[Q] N-Term(TMT6plex) 6 Q78PY7 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 Q78PY7; Q3UZI3; Q3TW51; Q3TRW3; Q3TJ56; E9Q3E9 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1; Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 0 2 2 0.2079 0 1 1 1 469.76691 938.52654 938.5257 0.9 0.00042 0/0 0 0 30345772 HCD 30 MS2 39.36329 503 29.515 30.0675 5890 5890 5887 QEplus033719.raw F4 620.3 385.5 581.3 418.6 495.9 516.7 34 2.02 1 FALSE 0.004271 0.07842 0.066 -250 11934 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPDGDAASQPR [R].rPDGDAASQPR.[T] N-Term(TMT6plex) 5 Q3TWI1 Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Lox PE=2 SV=1 Q3TWI1; Q3TX90; P28301; Q3TP83; Q3TLP7 Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Lox PE=2 SV=1; Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Lox PE=2 SV=1; Protein-lysine 6-oxidase OS=Mus musculus OX=10090 GN=Lox PE=1 SV=1; Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Lox PE=2 SV=1; Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Lox PE=2 SV=1 0 3 3 0.5762 0 1 1 1 466.91489 1398.73011 1398.72871 1 0.00047 0/0 0 0 6028531.5 HCD 30 MS2 64.11787 299.2 110 30.0748 5893 5893 5887 QEplus033719.raw F4 371.9 238.8 297.7 262.2 347.3 277.1 213 4.53 1 FALSE 1.14E-05 9.09E-10 1.815 -250 11941 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSTSYR [R].dSTSYR.[D] N-Term(TMT6plex) 5 Q501J6 Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1 Q501J6; Q3U741; Q78W10; Q3U6Y5; Q8K392 Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ddx17 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ddx17 PE=2 SV=1; DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 OS=Mus musculus OX=10090 GN=Ddx17 PE=2 SV=2 0 2 2 0.4444 0 1 1 1 479.24625 957.48522 957.48389 1.38 0.00066 0/0 0 0 5407657 HCD 30 MS2 31.78567 534 110 30.0773 5894 5894 5887 QEplus033719.raw F4 580.7 513.6 602.3 330.5 757.5 419.2 25 2.25 1 FALSE 0.002965 0.05774 0.12 -250 11949 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQTNVGQDGR [R].gQTNVGQDGR.[Q] N-Term(TMT6plex) 11 Q3UDN2 Vacuolar protein sorting-associated protein 53 homolog OS=Mus musculus OX=10090 GN=Vps53 PE=2 SV=1 F6Z4G7; Q3UDN2; Q3TX19; Q3TJT1; E9PYD3; E9PXG9; Q3TLZ3; Q8CCB4-2; Q8CCB4; E9PWD1; E9Q648 Vacuolar protein sorting-associated protein 53 homolog (Fragment) OS=Mus musculus OX=10090 GN=Vps53 PE=1 SV=1; Vacuolar protein sorting-associated protein 53 homolog OS=Mus musculus OX=10090 GN=Vps53 PE=2 SV=1; Vacuolar protein sorting-associated protein 53 homolog OS=Mus musculus OX=10090 GN=Vps53 PE=2 SV=1; Vacuolar protein sorting-associated protein 53 homolog OS=Mus musculus OX=10090 GN=Vps53 PE=2 SV=1; Vacuolar protein sorting-associated protein 53 homolog OS=Mus musculus OX=10090 GN=Vps53 PE=1 SV=1; Vacuolar protein sorting-associated protein 53 homolog OS=Mus musculus OX=10090 GN=Vps53 PE=1 SV=1; Vacuolar protein sorting-associated protein 53 homolog OS=Mus musculus OX=10090 GN=Vps53 PE=2 SV=1; Isoform 2 of Vacuolar protein sorting-associated protein 53 homolog OS=Mus musculus OX=10090 GN=Vps53; Vacuolar protein sorting-associated protein 53 homolog OS=Mus musculus OX=10090 GN=Vps53 PE=1 SV=1; Vacuolar protein sorting-associated protein 53 homolog (Fragment) OS=Mus musculus OX=10090 GN=Vps53 PE=1 SV=1; Vacuolar protein sorting-associated protein 53 homolog OS=Mus musculus OX=10090 GN=Vps53 PE=1 SV=1 0 2 2 0.3739 0 1 1 1 630.82721 1260.64714 1260.64939 -1.79 -0.00113 0/0 0 0 3658049.5 HCD 30 MS2 5.478961 239.2 110 30.0798 5895 5895 5887 QEplus033719.raw F4 276.6 201.7 237.3 196.4 293.4 230 169 3.37 1 FALSE 1.14E-05 0.0005586 0.713 -250 11969 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDRGPPQRPR [R].dDRGPPQRPR.[L] N-Term(TMT6plex) 8 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 2 2 0.4826 0 1 1 1 711.89203 1422.77678 1422.77632 0.32 0.00023 0/0 0 0 958895.625 HCD 30 MS2 58.19867 19.3 110 30.0921 5899 5899 5898 QEplus033719.raw F4 22.5 11.9 19.4 17.9 24.3 20.1 353 2.3 1 FALSE 0.001142 0.01533 0.329 -250 11976 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQQQEER [R].vQQQEER.[Q] N-Term(TMT6plex) 6 S4R2U9 Rho guanine nucleotide exchange factor 40 OS=Mus musculus OX=10090 GN=Arhgef40 PE=1 SV=1 Q3UPH7-6; S4R2U9; S4R189; Q3UPH7-3; Q3UPH7-2; Q3UPH7 Isoform 6 of Rho guanine nucleotide exchange factor 40 OS=Mus musculus OX=10090 GN=Arhgef40; Rho guanine nucleotide exchange factor 40 OS=Mus musculus OX=10090 GN=Arhgef40 PE=1 SV=1; Rho guanine nucleotide exchange factor 40 OS=Mus musculus OX=10090 GN=Arhgef40 PE=1 SV=1; Isoform 3 of Rho guanine nucleotide exchange factor 40 OS=Mus musculus OX=10090 GN=Arhgef40; Isoform 2 of Rho guanine nucleotide exchange factor 40 OS=Mus musculus OX=10090 GN=Arhgef40; Rho guanine nucleotide exchange factor 40 OS=Mus musculus OX=10090 GN=Arhgef40 PE=1 SV=1 0 2 2 0.432 0 1 1 1 573.31024 1145.61321 1145.61122 1.74 0.001 0/0 0 0 494661.875 HCD 30 MS2 51.10847 76.6 110 30.0946 5900 5900 5898 QEplus033719.raw F4 101.7 52.3 83.9 65.9 78.9 77 188 2.5 1 FALSE 0.000565 0.008672 0.427 -250 11981 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSAATTDEER [K].dSAATTDEER.[Q] N-Term(TMT6plex) 3 Q3U1J4 DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=2 A0A494B987; Q3ULS8; Q3U1J4 DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=1; DNA damage-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ddb1 PE=2 SV=1; DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=2 0 2 2 0.6997 0 1 1 1 662.31555 1323.62383 1323.62257 0.95 0.00063 0/0 0 0 20578134 HCD 30 MS2 21.47727 522.6 102.873 30.097 5901 5901 5898 QEplus033719.raw F4 575.6 388.3 489.4 552 569.2 561.3 62 3.93 1 FALSE 1.14E-05 4.94E-07 1.296 -250 11985 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAVGNSTR [K].eAVGNSTR.[I] N-Term(TMT6plex) 3 P58389 Serine/threonine-protein phosphatase 2A activator OS=Mus musculus OX=10090 GN=Ptpa PE=1 SV=1 Q8C0E1; A2AWE9; P58389 Serine/threonine-protein phosphatase 2A activator OS=Mus musculus OX=10090 GN=Ptpa PE=2 SV=1; Serine/threonine-protein phosphatase 2A activator OS=Mus musculus OX=10090 GN=Ptpa PE=1 SV=1; Serine/threonine-protein phosphatase 2A activator OS=Mus musculus OX=10090 GN=Ptpa PE=1 SV=1 0 2 2 0.4563 0 1 1 1 531.79138 1062.57549 1062.5741 1.3 0.00069 0/0 0 0 12507510 HCD 30 MS2 6.583978 548.6 110 30.0995 5902 5902 5898 QEplus033719.raw F4 776.6 433.9 646.8 440 554.3 439.9 263 2.63 1 FALSE 1.14E-05 0.0007457 0.688 -250 11993 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDTGEPMGR [R].tDTGEPmGR.[G] N-Term(TMT6plex); M7(Oxidation) 9 P07901 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4 Q3TKB9; P07901; B7ZC50; Q3TKA2; Q3UIF3; A0PJ91; Q8C2A9; Q3TKG0; Q8C5U3 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Heat shock protein HSP 90-alpha (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 0 2 2 0.7196 0 1 1 1 604.79321 1208.57915 1208.57787 1.06 0.00064 0/0 0 0 7665781.5 HCD 30 MS2 13.30107 234.7 110 30.1043 5904 5904 5898 QEplus033719.raw F4 221.2 176.6 385 160 261.1 204.5 73 1.89 1 FALSE 0.0005076 0.007824 0.442 -250 12026 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSEYER [K].sSEYER.[IL] N-Term(TMT6plex) 2 P46737 Lys-63-specific deubiquitinase BRCC36 OS=Mus musculus OX=10090 GN=Brcc3 PE=1 SV=1 P46737; Q7M757 Lys-63-specific deubiquitinase BRCC36 OS=Mus musculus OX=10090 GN=Brcc3 PE=1 SV=1; Lys-63-specific deubiquitinase BRCC36-like OS=Mus musculus OX=10090 GN=C6.1al PE=2 SV=1 0 2 2 0.362 0 1 1 1 500.25162 999.49596 999.49446 1.5 0.00075 0/0 0 0 3230347.5 HCD 30 MS2 0 280.9 110 30.1216 5910 5910 5909 QEplus033719.raw F4 322.4 211.7 303.7 305.5 283.2 258.9 36 2.21 1 FALSE 0.003182 0.06205 0.108 -250 12033 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEQGMSR [R].tEQGMSR.[S] N-Term(TMT6plex) 1 Q5F2E8 Serine/threonine-protein kinase TAO1 OS=Mus musculus OX=10090 GN=Taok1 PE=1 SV=1 Q5F2E8 Serine/threonine-protein kinase TAO1 OS=Mus musculus OX=10090 GN=Taok1 PE=1 SV=1 0 2 2 0.4933 0 1 1 1 519.26642 1037.52556 1037.52471 0.82 0.00043 0/0 0 0 3208631.25 HCD 30 MS2 16.14516 206 110 30.1241 5911 5911 5909 QEplus033719.raw F4 276 144.5 242.8 167.5 209.6 195.4 89 2.25 1 FALSE 0.0002119 0.004419 0.516 -250 12049 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQGGAGAGDDEEED [K].gQGGAGAGDDEEED.[-] N-Term(TMT6plex) 1 Q6ZWN5 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3 Q6ZWN5 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3 0 2 2 1 0 1 1 1 768.31927 1535.63127 1535.6295 1.15 0.00088 0/0 0 0 7967125.5 HCD 30 MS2 0 61.9 110 30.1289 5913 5913 5909 QEplus033719.raw F4 61.8 52.7 65.5 52.4 69 70.1 2 4.09 1 FALSE 1.14E-05 3.27E-07 1.329 -250 12050 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRPIAGQGR [R].gRPIAGQGR.[K] N-Term(TMT6plex) 4 Q9WU84 Copper chaperone for superoxide dismutase OS=Mus musculus OX=10090 GN=Ccs PE=1 SV=1 Q9WU84; A0A494BAJ5; A0A494BB58; A0A494BBF1 Copper chaperone for superoxide dismutase OS=Mus musculus OX=10090 GN=Ccs PE=1 SV=1; Superoxide dismutase [Cu-Zn] OS=Mus musculus OX=10090 GN=Ccs PE=1 SV=1; Copper chaperone for superoxide dismutase OS=Mus musculus OX=10090 GN=Ccs PE=1 SV=1; Copper chaperone for superoxide dismutase OS=Mus musculus OX=10090 GN=Ccs PE=1 SV=1 0 3 3 0.3811 0 1 1 1 380.89835 1140.68048 1140.67991 0.51 0.00019 0/0 0 0 7730946.5 HCD 30 MS2 33.17345 419.7 110 30.1313 5914 5914 5909 QEplus033719.raw F4 839.8 247.4 377.9 303.9 355.3 394.1 118 2.86 1 FALSE 0.001607 0.02523 0.243 -250 12059 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSLDQNRR [R].gSLDQNRR.[L] N-Term(TMT6plex) 5 P51855 Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1 P51855; Q3UEE2; Q8R436; Q3TWM2; H3BKH4 Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1; Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1; Glutathione synthase (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=2 SV=1; Glutathione synthase (Fragment) OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1 1 3 3 0.3745 0 1 1 1 392.22128 1174.6493 1174.649 0.25 0.0001 0/0 0 0 5617271.5 HCD 30 MS2 34.63618 365.9 110 30.1338 5915 5915 5909 QEplus033719.raw F4 545.3 233.8 328.2 366.5 365.1 356.5 322 2.67 1 FALSE 0.001473 0.02142 0.269 -250 12076 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEMNER [R].sEMNER.[N] N-Term(TMT6plex) 3 Q3U055 Procollagen-lysine 5-dioxygenase OS=Mus musculus OX=10090 GN=Plod2 PE=2 SV=1 Q3U055; Q9R0B9; E9Q718 "Procollagen-lysine 5-dioxygenase OS=Mus musculus OX=10090 GN=Plod2 PE=2 SV=1; Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Mus musculus OX=10090 GN=Plod2 PE=1 SV=2; Procollagen-lysine 5-dioxygenase OS=Mus musculus OX=10090 GN=Plod2 PE=1 SV=1" 0 2 2 0.332 0 1 1 1 497.74536 994.48345 994.48251 0.94 0.00047 0/0 0 0 4614496 HCD 30 MS2 11.23791 433.9 110 30.1388 5917 5917 5909 QEplus033719.raw F4 627.4 305.1 486.8 433 376.1 375 61 2.41 1 FALSE 0.004181 0.07656 0.071 -250 12084 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSSCEQR [K].vSScEQR.[L] N-Term(TMT6plex); C4(Carbamidomethyl) 9 Q9ET54-6; Q9ET54 Isoform 6 of Palladin OS=Mus musculus OX=10090 GN=Palld;Palladin OS=Mus musculus OX=10090 GN=Palld PE=1 SV=2 Q8C306; D3Z1J5; Q9ET54-3; Q9ET54-2; Q9ET54-6; Q9ET54; Q9ET54-5; K0BWC3; Q9ET54-4 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Palladin (Fragment) OS=Mus musculus OX=10090 GN=Palld PE=1 SV=1; Isoform 3 of Palladin OS=Mus musculus OX=10090 GN=Palld; Isoform 2 of Palladin OS=Mus musculus OX=10090 GN=Palld; Isoform 6 of Palladin OS=Mus musculus OX=10090 GN=Palld; Palladin OS=Mus musculus OX=10090 GN=Palld PE=1 SV=2; Isoform 5 of Palladin OS=Mus musculus OX=10090 GN=Palld; Palladin isoform OS=Mus musculus OX=10090 GN=Palld PE=2 SV=1; Isoform 4 of Palladin OS=Mus musculus OX=10090 GN=Palld 0 2 2 0.3309 0 1 1 1 547.77716 1094.54704 1094.54617 0.8 0.00044 0/0 0 0 4035023.75 HCD 30 MS2 22.30133 335 110 30.1413 5918 5918 5909 QEplus033719.raw F4 602.2 240.9 371.4 212.3 275.2 307.7 110 2.69 2 FALSE 0.0006574 0.01003 0.404 -250 12090 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AASEQAAANSNSR [R].aASEQAAANSNSR.[D] N-Term(TMT6plex) 1 Q8C3X8 Lipase maturation factor 2 OS=Mus musculus OX=10090 GN=Lmf2 PE=1 SV=1 Q8C3X8 Lipase maturation factor 2 OS=Mus musculus OX=10090 GN=Lmf2 PE=1 SV=1 0 2 2 0.7788 0 1 1 1 753.38 1505.75273 1505.75056 1.44 0.00108 0/0 0 0 3928315 HCD 30 MS2 0 183.1 110 30.1439 5919 5919 5909 QEplus033719.raw F4 172.1 189.5 183.6 137.4 260.9 154.9 163 4.52 1 FALSE 1.14E-05 7.36E-13 2.402 -250 12099 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPDGDAASQPR [R].rPDGDAASQPR.[T] N-Term(TMT6plex) 5 Q3TWI1 Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Lox PE=2 SV=1 Q3TWI1; Q3TX90; P28301; Q3TP83; Q3TLP7 Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Lox PE=2 SV=1; Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Lox PE=2 SV=1; Protein-lysine 6-oxidase OS=Mus musculus OX=10090 GN=Lox PE=1 SV=1; Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Lox PE=2 SV=1; Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Lox PE=2 SV=1 0 2 2 0.4247 0 1 1 1 699.86865 1398.73003 1398.72871 0.95 0.00066 0/0 0 0 1829943.125 HCD 30 MS2 61.10243 33.2 110 30.1512 5921 5921 5920 QEplus033719.raw F4 37 29.5 30.3 30.5 42.2 29.5 213 2.99 1 FALSE 1.14E-05 1.98E-05 0.991 -250 12126 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQHGEVVR [R].aQHGEVVR.[C] N-Term(TMT6plex) 2 A2RRJ4 Exportin 5 OS=Mus musculus OX=10090 GN=Xpo5 PE=2 SV=1 A2RRJ4; Q924C1 Exportin 5 OS=Mus musculus OX=10090 GN=Xpo5 PE=2 SV=1; Exportin-5 OS=Mus musculus OX=10090 GN=Xpo5 PE=1 SV=1 0 3 3 0.136 0 1 1 1 375.55054 1124.63706 1124.63737 -0.28 -0.0001 0/0 0 0 9540982 HCD 30 MS2 9.242566 296.8 110 30.161 5925 5925 5920 QEplus033719.raw F4 402.1 182.9 354.4 227.4 371 243.3 186 3.53 1 FALSE 1.14E-05 1.82E-06 1.188 -250 12142 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEPDESNAR [K].aEPDESNAR.[Y] N-Term(TMT6plex) 2 P61089 Ubiquitin-conjugating enzyme E2 N OS=Mus musculus OX=10090 GN=Ube2n PE=1 SV=1 A0A1W2P7Z3; P61089 Ubiquitin-conjugating enzyme E2 N OS=Mus musculus OX=10090 GN=Ube2n PE=1 SV=1; Ubiquitin-conjugating enzyme E2 N OS=Mus musculus OX=10090 GN=Ube2n PE=1 SV=1 0 2 2 0.6511 0 1 1 1 609.30219 1217.59709 1217.59596 0.93 0.00057 0/0 0 0 7462946 HCD 30 MS2 7.470144 478.5 110 30.1659 5927 5927 5920 QEplus033719.raw F4 529.5 354.4 452.7 432.7 608.3 493.6 53 3.21 1 FALSE 1.14E-05 7.86E-06 1.067 -250 12157 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCSYDSR [K].scSYDSR.[G] N-Term(TMT6plex); C2(Carbamidomethyl) 1 D3Z5I1 Zinc finger CCCH-type antiviral protein 1 OS=Mus musculus OX=10090 GN=Zc3hav1 PE=1 SV=1 D3Z5I1 Zinc finger CCCH-type antiviral protein 1 OS=Mus musculus OX=10090 GN=Zc3hav1 PE=1 SV=1 0 2 2 0.801 0 1 1 1 552.25385 1103.50041 1103.49889 1.38 0.00076 0/0 0 0 4188083.25 HCD 30 MS2 9.638578 238 110 30.1807 5932 5932 5931 QEplus033719.raw F4 218.7 219.8 243.7 217.1 311.8 216.8 7 2.01 1 FALSE 0.002913 0.05727 0.121 -250 12163 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQHQESLR [R].eQHQESLR.[S] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 3 3 0.5804 0 1 1 1 419.22498 1255.66037 1255.65923 0.91 0.00038 0/0 0 0 65554096 HCD 30 MS2 40.7755 198.3 18.291 30.1855 5934 5934 5931 QEplus033719.raw F4 298.7 81.6 186.6 266.9 167.6 188.6 193 4.29 1 FALSE 1.14E-05 4.44E-05 0.924 -250 12168 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AASEQAAANSNSR [R].aASEQAAANSNSR.[D] N-Term(TMT6plex) 1 Q8C3X8 Lipase maturation factor 2 OS=Mus musculus OX=10090 GN=Lmf2 PE=1 SV=1 Q8C3X8 Lipase maturation factor 2 OS=Mus musculus OX=10090 GN=Lmf2 PE=1 SV=1 0 3 3 0.7267 0 1 1 1 502.5889 1505.75214 1505.75056 1.05 0.00053 0/0 0 0 26413284 HCD 30 MS2 25.07773 248.6 71.969 30.1878 5935 5935 5931 QEplus033719.raw F4 395.8 205 280.5 157.6 213.4 239.6 160 4.94 1 FALSE 1.14E-05 2.87E-08 1.53 -250 12193 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSLDQNRR [R].gSLDQNRR.[L] N-Term(TMT6plex) 5 P51855 Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1 P51855; Q3UEE2; Q8R436; Q3TWM2; H3BKH4 Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1; Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1; Glutathione synthase (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=2 SV=1; Glutathione synthase (Fragment) OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1 1 2 2 0.3571 0 1 1 1 587.82849 1174.64971 1174.649 0.6 0.00035 0/0 0 0 2271158.5 HCD 30 MS2 0 145 110 30.1975 5939 5939 5931 QEplus033719.raw F4 174 103.8 146.7 148.6 157.6 139.4 282 2.38 1 FALSE 0.0002814 0.005736 0.484 -250 12202 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STMQQQER [K].sTMQQQER.[D] N-Term(TMT6plex) 5 F7CC56 RB1-inducible coiled-coil protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Rb1cc1 PE=1 SV=1 F7CC56; Q8CHH8; Q9ESK9; F7CCJ3; B2RX00 RB1-inducible coiled-coil protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Rb1cc1 PE=1 SV=1; MKIAA0203 protein (Fragment) OS=Mus musculus OX=10090 GN=Rb1cc1 PE=2 SV=1; RB1-inducible coiled-coil protein 1 OS=Mus musculus OX=10090 GN=Rb1cc1 PE=1 SV=3; RB1-inducible coiled-coil protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Rb1cc1 PE=1 SV=1; RB1-inducible coiled-coil 1 OS=Mus musculus OX=10090 GN=Rb1cc1 PE=2 SV=1 0 2 2 0.6604 0 1 1 1 618.8147 1236.62212 1236.6204 1.39 0.00086 0/0 0 0 2226390.5 HCD 30 MS2 0 134.2 110 30.2 5940 5940 5931 QEplus033719.raw F4 144.6 114.2 141 114.4 173.3 117.6 137 2.65 1 FALSE 1.14E-05 8.15E-05 0.874 -250 12211 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YNDQASSNR [R].yNDQASSNR.[I] N-Term(TMT6plex) 4 Q8BM38 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppp2r3a PE=2 SV=1 Q8BM38; B2RXC8; Q3V1Y6; G3X9E8 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppp2r3a PE=2 SV=1; 3222402P14Rik protein OS=Mus musculus OX=10090 GN=Ppp2r3a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppp2r3a PE=2 SV=1; Protein phosphatase 2, regulatory subunit B'', alpha OS=Mus musculus OX=10090 GN=Ppp2r3a PE=1 SV=1" 0 2 2 0.7093 0 1 1 1 642.31403 1283.62078 1283.61776 2.35 0.00151 0/0 0 0 1642557.125 HCD 30 MS2 27.16175 121.4 110 30.2025 5941 5941 5931 QEplus033719.raw F4 131.5 77 120.8 154.5 130.5 113.9 83 2.89 1 FALSE 1.14E-05 0.0001406 0.829 -250 12216 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAEQSSAAGQDGEAGR [R].qAEQSSAAGQDGEAGR.[M] N-Term(TMT6plex) 1 Q9CPS7 RNA-binding protein PNO1 OS=Mus musculus OX=10090 GN=Pno1 PE=1 SV=1 Q9CPS7 RNA-binding protein PNO1 OS=Mus musculus OX=10090 GN=Pno1 PE=1 SV=1 0 2 2 0.7505 0 1 1 1 895.92889 1790.85051 1790.84665 2.16 0.00193 0/0 0 0 1413393.625 HCD 30 MS2 0 68.8 110 30.2099 5943 5943 5942 QEplus033719.raw F4 57.6 62.3 91.7 46 76.9 78.6 63 5.45 1 FALSE 1.14E-05 6.31E-16 3.006 -250 12223 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQHQESLR [R].eQHQESLR.[S] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.5988 0 1 1 1 628.33356 1255.65984 1255.65923 0.48 0.0003 0/0 0 0 11063984 HCD 30 MS2 4.289134 333.7 110 30.2124 5944 5944 5942 QEplus033719.raw F4 432.5 167.4 311.7 435.5 291.8 363.4 196 3.34 1 FALSE 1.14E-05 0.0001463 0.825 -250 12237 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DPSVHQAR [K].dPSVHQAR.[E] N-Term(TMT6plex) 3 Q91Z38 Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1 Q91Z38; Q3TDF3; A2AJK8 Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Ttc1 PE=2 SV=1; Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1 0 3 3 0.6224 0 1 1 1 380.21091 1138.61817 1138.61664 1.35 0.00051 0/0 0 0 8648722 HCD 30 MS2 45.04556 332.8 110 30.2173 5946 5946 5942 QEplus033719.raw F4 700.1 189.6 305.7 238 289.9 273.6 195 3.84 1 FALSE 1.14E-05 6.57E-06 1.082 -250 12252 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMATSR [K].sMATSR.[R] N-Term(TMT6plex) 10 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; Q3TYI8; B2RXX6; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.206 0 1 1 1 441.23953 881.47179 881.47122 0.65 0.00029 0/0 0 0 4534543.5 HCD 30 MS2 17.11422 403.1 110 30.2223 5948 5948 5942 QEplus033719.raw F4 756 255.9 480.8 283.7 202.5 440 44 1.99 2 FALSE 0.003101 0.06029 0.113 -250 12269 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQLQEQQR [R].rQLQEQQR.[Q] N-Term(TMT6plex) 11 J3QNM3 Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1 J3QNM3; Q03173-3; A0A0A6YW06; Q03173-4; Q03173; Q03173-6; A0A0A6YXC8; E9QKQ9; Q03173-5; E9QLZ9; E9QKR1 Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Isoform 2 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Isoform 3 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=2; Isoform 6 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Isoform 4 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=2 1 3 3 0.5249 0 1 1 1 438.91977 1314.74475 1314.74396 0.6 0.00026 0/0 0 0 2863803.75 HCD 30 MS2 30.06866 190.1 110 30.2273 5950 5950 5942 QEplus033719.raw F4 256.3 101.8 244.5 162.9 198.1 176.9 361 4.02 1 FALSE 1.14E-05 8.83E-07 1.248 -250 12282 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESGADGASTSPR [K].eSGADGASTSPR.[N] N-Term(TMT6plex) 3 A0A0R4J1I2 ADA3 homolog OS=Mus musculus OX=10090 GN=Tada3 PE=1 SV=1 A0A0R4J1I2; Q8R0L9; Q8R0L9-2 ADA3 homolog OS=Mus musculus OX=10090 GN=Tada3 PE=1 SV=1; Transcriptional adapter 3 OS=Mus musculus OX=10090 GN=Tada3 PE=1 SV=1; Isoform 2 of Transcriptional adapter 3 OS=Mus musculus OX=10090 GN=Tada3 0 2 2 0.5964 0 1 1 1 682.33527 1363.66326 1363.6651 -1.35 -0.00092 0/0 0 0 1312258.625 HCD 30 MS2 12.22741 78.5 110 30.2323 5952 5952 5942 QEplus033719.raw F4 74 93 79.7 53.4 109 61.9 84 2.75 1 FALSE 1.14E-05 2.82E-07 1.342 -250 12294 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QESNEYR [K].qESNEYR.[R] N-Term(TMT6plex) 8 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.6071 0 1 1 1 577.78589 1154.5645 1154.56393 0.49 0.00028 0/0 0 0 2532979.25 HCD 30 MS2 11.7003 116.4 110 30.2421 5955 5955 5953 QEplus033719.raw F4 132.9 102.7 119.1 102.3 137.4 104 63 2.24 2 FALSE 0.005349 0.09148 0.03 -250 12299 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALSSQHQAR [R].aLSSQHQAR.[I] N-Term(TMT6plex) 10 P20029 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q3U9G2; Q3U6V3; Q3TUS2; Q3UEM8; Q3U7T8; Q3TI47 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1 0 3 3 0.493 0 1 1 1 409.56516 1226.68091 1226.6803 0.5 0.0002 0/0 0 0 14057751 HCD 30 MS2 40.6711 435.9 79.199 30.2443 5956 5956 5953 QEplus033719.raw F4 1510 310.7 130.1 353.2 210 101.3 256 3.57 1 FALSE 1.14E-05 7.47E-06 1.071 -250 12308 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMHACTAST [K].rMHAcTAST.[-] N-Term(TMT6plex); C5(Carbamidomethyl) 1 Q9ES74 Serine/threonine-protein kinase Nek7 OS=Mus musculus OX=10090 GN=Nek7 PE=1 SV=1 Q9ES74 Serine/threonine-protein kinase Nek7 OS=Mus musculus OX=10090 GN=Nek7 PE=1 SV=1 1 3 3 0.6612 0 1 1 1 421.87616 1263.61393 1263.61354 0.3 0.00013 0/0 0 0 10494714 HCD 30 MS2 29.42555 265.4 110 30.2468 5957 5957 5953 QEplus033719.raw F4 464 168.3 256.4 173.5 236.9 293.6 97 3.69 1 FALSE 0.0002019 0.004032 0.526 -250 12316 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CAQQTVR [R].cAQQTVR.[M] N-Term(TMT6plex); C1(Carbamidomethyl) 3 Q8R2S3 Nucleolar protein 3 (Apoptosis repressor with CARD domain) OS=Mus musculus OX=10090 GN=Nol3 PE=2 SV=1 Q8R2S3; Q9D1X0; Q8C550 Nucleolar protein 3 (Apoptosis repressor with CARD domain) OS=Mus musculus OX=10090 GN=Nol3 PE=2 SV=1; Nucleolar protein 3 OS=Mus musculus OX=10090 GN=Nol3 PE=1 SV=1; CARD domain-containing protein OS=Mus musculus OX=10090 GN=Nol3 PE=2 SV=1 0 2 2 0.5338 0 1 1 1 546.29578 1091.58428 1091.58289 1.27 0.00069 0/0 0 0 5565442.5 HCD 30 MS2 14.35037 391.3 110 30.2518 5959 5959 5953 QEplus033719.raw F4 567 193.1 441.9 441.9 273.2 430.8 239 2.66 1 FALSE 0.0002719 0.005448 0.491 -250 12323 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGSESSQTGASATSGR [R].tGSESSQTGASATSGR.[N] N-Term(TMT6plex) 6 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; Q3TSY9; Q3UGC0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 0 3 3 0.7711 0 1 1 1 571.61377 1712.82676 1712.82485 1.11 0.00064 0/0 0 0 5507192.5 HCD 30 MS2 15.35087 69.6 110 30.2543 5960 5960 5953 QEplus033719.raw F4 68.1 74.1 73.5 59.6 86 56.5 107 6.86 1 FALSE 1.14E-05 1.76E-12 2.33 -250 12329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAEQSSAAGQDGEAGR [R].qAEQSSAAGQDGEAGR.[M] N-Term(TMT6plex) 1 Q9CPS7 RNA-binding protein PNO1 OS=Mus musculus OX=10090 GN=Pno1 PE=1 SV=1 Q9CPS7 RNA-binding protein PNO1 OS=Mus musculus OX=10090 GN=Pno1 PE=1 SV=1 0 3 3 0.8134 0 1 1 1 597.62128 1790.84928 1790.84665 1.47 0.00088 0/0 0 0 5215126.5 HCD 30 MS2 0 47.5 110 30.2568 5961 5961 5953 QEplus033719.raw F4 48.2 39 49.5 52 42.1 54.5 62 5.36 1 FALSE 1.14E-05 2.46E-09 1.733 -250 12353 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGSESSQTGASATSGR [R].tGSESSQTGASATSGR.[N] N-Term(TMT6plex) 6 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; Q3TSY9; Q3UGC0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 0 2 2 0.8 0 1 1 1 856.91675 1712.82622 1712.82485 0.8 0.00068 0/0 0 0 10632879 HCD 30 MS2 3.08734 184.2 110 30.2691 5965 5965 5964 QEplus033719.raw F4 187.3 209.2 194.8 146.2 215.5 152.3 109 4.9 1 FALSE 1.14E-05 6.31E-16 3.186 -250 12360 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGGQTAPASTR [R].eGGQTAPASTR.[L] N-Term(TMT6plex) 1 Q3SX14 TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin Q3SX14 TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin 0 2 2 0.5808 0 1 1 1 652.34412 1303.68096 1303.68036 0.46 0.0003 0/0 0 0 4676662.5 HCD 30 MS2 0 149.9 110 30.2716 5966 5966 5964 QEplus033719.raw F4 153.7 135.5 160.5 161.2 181.9 106.8 244 3.34 1 TRUE 1.14E-05 2.38E-10 1.925 -250 12366 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPVQDHR [R].tPVQDHR.[S] N-Term(TMT6plex) 2 B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 P14873; B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=1 SV=2; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 0 3 3 0.3716 0 1 1 1 361.20248 1081.5929 1081.59517 -2.1 -0.00076 0/0 0 0 14965612 HCD 30 MS2 66.37603 549.8 32.659 30.2739 5967 5967 5964 QEplus033719.raw F4 538.5 182.5 1070.4 452.8 631.4 423.2 188 2.18 1 FALSE 0.00155 0.02339 0.255 -250 12374 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDRGDQVPNR [R].nDRGDQVPNR.[K] N-Term(TMT6plex) 3 Q8CH18 Cell division cycle and apoptosis regulator protein 1 OS=Mus musculus OX=10090 GN=Ccar1 PE=1 SV=1 Q8CH18-2; Q8CH18; Q8CH18-3 Isoform 2 of Cell division cycle and apoptosis regulator protein 1 OS=Mus musculus OX=10090 GN=Ccar1; Cell division cycle and apoptosis regulator protein 1 OS=Mus musculus OX=10090 GN=Ccar1 PE=1 SV=1; Isoform 3 of Cell division cycle and apoptosis regulator protein 1 OS=Mus musculus OX=10090 GN=Ccar1 1 3 3 0.4698 0 1 1 1 467.24548 1399.7219 1399.72395 -1.47 -0.00069 0/0 0 0 9935870 HCD 30 MS2 56.9174 379.8 87.155 30.2761 5968 5968 5964 QEplus033719.raw F4 558.4 315.5 400.3 257.5 378.7 368.4 180 2.81 1 FALSE 0.0001504 0.003299 0.548 -250 12379 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSGPVER [K].sSGPVER.[L] N-Term(TMT6plex) 2 Q8CGB6 Tensin-2 OS=Mus musculus OX=10090 GN=Tns2 PE=1 SV=1 Q8CGB6; Q8CGB6-3 Tensin-2 OS=Mus musculus OX=10090 GN=Tns2 PE=1 SV=1; Isoform 3 of Tensin-2 OS=Mus musculus OX=10090 GN=Tns2 0 2 2 0.2092 0 1 1 1 480.76938 960.53148 960.53118 0.32 0.00015 0/0 0 0 3708185.5 HCD 30 MS2 29.0838 307.5 110 30.2786 5969 5969 5964 QEplus033719.raw F4 448.1 252.1 377.6 246.8 252.7 267.8 235 2.39 1 FALSE 0.0008991 0.0124 0.367 -250 12388 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSAENR [R].vSAENR.[A] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.1943 0 1 1 1 452.75623 904.50517 904.50496 0.24 0.00011 0/0 0 0 3587956.75 HCD 30 MS2 6.472939 270.4 110 30.2811 5970 5970 5964 QEplus033719.raw F4 663.7 68.2 179 277.7 93.2 340.3 144 2.11 2 FALSE 0.005014 0.08699 0.043 -250 12397 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLRQDEHTRR [K].dLRQDEHTRR.[E] N-Term(TMT6plex) 2 Q62159 Rho-related GTP-binding protein RhoC OS=Mus musculus OX=10090 GN=Rhoc PE=1 SV=2 H3BL56; Q62159 Rho-related GTP-binding protein RhoC OS=Mus musculus OX=10090 GN=Rhoc PE=1 SV=1; Rho-related GTP-binding protein RhoC OS=Mus musculus OX=10090 GN=Rhoc PE=1 SV=2 2 3 3 0.5196 0 1 1 1 518.94904 1554.83255 1554.82982 1.76 0.00091 0/0 0 0 2733497.25 HCD 30 MS2 32.6045 167.4 110 30.2836 5971 5971 5964 QEplus033719.raw F4 169.1 142.6 185.4 136.2 210.1 160.7 308 3.31 1 FALSE 6.52E-05 0.002671 0.57 -250 12432 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGAGSEGAPSR [R].aGAGSEGAPSR.[G] N-Term(TMT6plex) 1 A0A5F8MQ82 Chromodomain helicase DNA-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Chd3 PE=1 SV=1 A0A5F8MQ82 Chromodomain helicase DNA-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Chd3 PE=1 SV=1 0 2 2 0.5949 0 1 1 1 594.81274 1188.61821 1188.61703 0.99 0.00059 0/0 0 0 1856146.625 HCD 30 MS2 64.23784 144.2 110 30.301 5977 5977 5975 QEplus033719.raw F4 141.2 150.2 169.9 88.4 180.3 135 146 3.16 1 FALSE 1.14E-05 4.51E-07 1.303 -250 12442 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQPAPPR [K].rQPAPPR.[E] N-Term(TMT6plex) 2 Q9CQM8 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=1 Q4VA28; Q9CQM8 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=2 SV=1; 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=1 1 3 3 0.7346 0 1 1 1 350.88403 1050.63755 1050.63698 0.54 0.00019 0/0 0 0 25632002 HCD 30 MS2 24.22443 229.7 38.251 30.3055 5979 5979 5975 QEplus033719.raw F4 286.6 175.2 229 206.8 265.4 215.4 43 3.09 1 FALSE 1.14E-05 9.27E-05 0.863 -250 12449 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQVCQR [R].aQVcQR.[A] N-Term(TMT6plex); C4(Carbamidomethyl) 4 Q80UL3 Galactokinase 1 OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1 Q80UL3; Q9R0N0; Q9CXZ9; Q9CWW5 Galactokinase 1 OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1; Galactokinase OS=Mus musculus OX=10090 GN=Galk1 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1 0 2 2 0.326 0 1 1 1 495.77194 990.53661 990.53522 1.41 0.0007 0/0 0 0 10512515 HCD 30 MS2 22.96286 483.1 110 30.308 5980 5980 5975 QEplus033719.raw F4 586.1 397.4 683.9 404 255.4 571.6 251 1.81 1 FALSE 0.002258 0.04445 0.159 -250 12463 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSNLQSR [R].sSNLQSR.[S] N-Term(TMT6plex) 7 E9PYJ9; Q9JKS4 LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1;LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1 Q9JKS4-3; E9PYJ9; Q9JKS4-6; Q9JKS4; Q9JKS4-5; Q9JKS4-4; Q9JKS4-2 Isoform 3 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3; LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1; Isoform 6 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3; LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1; Isoform 5 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3; Isoform 4 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3; Isoform 2 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 0 2 2 0.1651 0 1 1 1 510.78568 1020.56407 1020.56354 0.52 0.00027 0/0 0 0 4635484.5 HCD 30 MS2 55.65906 427.6 110 30.3129 5982 5982 5975 QEplus033719.raw F4 696.5 165.7 463 542.4 214.4 483.8 247 2.12 2 FALSE 0.002056 0.03718 0.185 -250 12471 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGGQTAPASTR [R].eGGQTAPASTR.[L] N-Term(TMT6plex) 1 Q3SX14 TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin Q3SX14 TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin 0 3 3 0.196 0 1 1 1 435.23557 1303.69214 1303.68036 9.04 0.00393 0/0 0 0 4238310 HCD 30 MS2 22.73541 211.5 110 30.3154 5983 5983 5975 QEplus033719.raw F4 306.7 137.6 203.6 159.4 255.5 206.1 254 3.01 1 TRUE 0.001429 0.0205 0.277 -250 12481 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPASHDMR [R].gPASHDMR.[G] N-Term(TMT6plex) 1 Q8C7E9 Cleavage stimulation factor subunit 2 tau variant OS=Mus musculus OX=10090 GN=Cstf2t PE=1 SV=2 Q8C7E9 Cleavage stimulation factor subunit 2 tau variant OS=Mus musculus OX=10090 GN=Cstf2t PE=1 SV=2 0 3 3 0.7003 0 1 1 1 367.18866 1099.55143 1099.55159 -0.15 -0.00006 0/0 0 0 4171907.5 HCD 30 MS2 54.31085 283 110 30.3179 5984 5984 5975 QEplus033719.raw F4 536.6 137.3 319.4 192.3 235.6 276.7 58 3.27 1 FALSE 1.14E-05 7.54E-05 0.88 -250 12486 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQTAYQR [K].gQTAYQR.[K] N-Term(TMT6plex) 13 B0R077 Zinc finger MYM-type protein 3 OS=Mus musculus OX=10090 GN=Zmym3 PE=1 SV=1 B0R077; Q9CU65; A2A791; A0A286YDI0; Q3U2E2; Q8CG95; A2A791-2; B1AXS8; Q9JLM4; B1AXS6; F6VYE2; B1AXS7; Q8BZ73 Zinc finger MYM-type protein 3 OS=Mus musculus OX=10090 GN=Zmym3 PE=1 SV=1; Zinc finger MYM-type protein 2 OS=Mus musculus OX=10090 GN=Zmym2 PE=1 SV=3; Zinc finger MYM-type protein 4 OS=Mus musculus OX=10090 GN=Zmym4 PE=1 SV=1; Zinc finger MYM-type protein 5 OS=Mus musculus OX=10090 GN=Zmym5 PE=1 SV=1; Zinc finger MYM-type protein 5 OS=Mus musculus OX=10090 GN=Zmym5 PE=2 SV=2; Zinc finger MYM-type protein 3 OS=Mus musculus OX=10090 GN=Zmym3 PE=1 SV=1; Isoform 2 of Zinc finger MYM-type protein 4 OS=Mus musculus OX=10090 GN=Zmym4; Zinc finger MYM-type protein 3 OS=Mus musculus OX=10090 GN=Zmym3 PE=1 SV=1; Zinc finger MYM-type protein 3 OS=Mus musculus OX=10090 GN=Zmym3 PE=1 SV=1; Zinc finger MYM-type protein 3 OS=Mus musculus OX=10090 GN=Zmym3 PE=1 SV=1; Zinc finger MYM-type protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Zmym4 PE=1 SV=1; Zinc finger MYM-type protein 3 OS=Mus musculus OX=10090 GN=Zmym3 PE=1 SV=1; TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Zmym5 PE=2 SV=1 0 2 2 0.4929 0 1 1 1 526.78925 1052.57121 1052.56862 2.46 0.0013 0/0 0 0 3960121 HCD 30 MS2 45.87617 386.9 110 30.3204 5985 5985 5975 QEplus033719.raw F4 443.8 325.4 418.6 290.8 500.2 342.7 169 2.11 1 FALSE 0.0002218 0.004672 0.509 -250 12514 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEPDESNAR [K].aEPDESNAR.[Y] N-Term(TMT6plex) 2 P61089 Ubiquitin-conjugating enzyme E2 N OS=Mus musculus OX=10090 GN=Ube2n PE=1 SV=1 A0A1W2P7Z3; P61089 Ubiquitin-conjugating enzyme E2 N OS=Mus musculus OX=10090 GN=Ube2n PE=1 SV=1; Ubiquitin-conjugating enzyme E2 N OS=Mus musculus OX=10090 GN=Ube2n PE=1 SV=1 0 3 3 0.6894 0 1 1 1 406.53693 1217.59623 1217.59596 0.22 0.00009 0/0 0 0 9528129 HCD 30 MS2 10.01021 193.2 110 30.3352 5990 5990 5986 QEplus033719.raw F4 212.4 140.5 183.8 162.9 250.7 208.9 55 3.67 1 FALSE 5.44E-05 0.001903 0.603 -250 12548 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GADTNVR [R].gADTNVR.[D] N-Term(TMT6plex) 2 A0A494B9J0 Ankyrin repeat domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ankrd2 PE=1 SV=1 A0A494B9J0; Q9WV06 Ankyrin repeat domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ankrd2 PE=1 SV=1; Ankyrin repeat domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ankrd2 PE=1 SV=3 0 2 2 0.3171 0 1 1 1 481.26764 961.528 961.52642 1.64 0.00079 0/0 0 0 4780493.5 HCD 30 MS2 23.31202 444 110 30.3477 5995 5995 5986 QEplus033719.raw F4 668.7 183.9 578 498.6 175.6 559.4 178 2.46 1 FALSE 5.44E-05 0.001908 0.603 -250 12563 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALSSQHQAR [R].aLSSQHQAR.[I] N-Term(TMT6plex) 10 P20029 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q3U9G2; Q3U6V3; Q3TUS2; Q3UEM8; Q3U7T8; Q3TI47 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1 0 2 2 0.3779 0 1 1 1 613.8443 1226.68132 1226.6803 0.83 0.00051 0/0 0 0 730463.9375 HCD 30 MS2 25.19708 50.2 110 30.3575 5998 5998 5997 QEplus033719.raw F4 63.5 30.9 30.1 91.9 67.7 17 237 2.17 1 FALSE 1.14E-05 3.86E-06 1.126 -250 12578 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MNQGTAR [R].mNQGTAR.[L] N-Term(TMT6plex) 10 Q6ZQ61 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1 A0A494B968; Q6ZQ61; Q4FJT0; A0A494B9B1; A0A494BAZ2; Q3TTX0; Q9R0U5; A0A494B9C9; A0A494B8Y5; Q5BL18 Matrin-3 (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=4 SV=1; MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matr3 protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin-3 (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1; Matrin-3 (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin3 OS=Mus musculus OX=10090 PE=4 SV=1; Small nucleolar RNA host gene 4 (Fragment) OS=Mus musculus OX=10090 GN=Snhg4 PE=4 SV=1; Small nucleolar RNA host gene 4 (Fragment) OS=Mus musculus OX=10090 GN=Snhg4 PE=4 SV=1; Matrin 3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1 0 2 2 0.4922 0 1 1 1 503.76892 1006.53057 1006.53013 0.43 0.00022 0/0 0 0 9947595 HCD 30 MS2 20.36567 530.4 110 30.3625 6000 6000 5997 QEplus033719.raw F4 893.6 388.3 618.5 371.9 384.8 525.5 149 2.58 1 FALSE 0.001318 0.01815 0.298 -250 12606 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSGPESPGR [R].dSGPESPGR.[T] N-Term(TMT6plex) 2 Q52KR3 Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2 PE=1 SV=2 Q52KR3-6; Q52KR3 Isoform 6 of Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2; Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2 PE=1 SV=2 0 2 2 0.6677 0 1 1 1 565.7865 1130.56572 1130.56393 1.58 0.00089 0/0 0 0 3175395 HCD 30 MS2 8.629813 183.9 110 30.3775 6006 6006 5997 QEplus033719.raw F4 215.4 169.3 166.1 180.7 214.5 157.4 51 3.16 1 FALSE 1.14E-05 3.27E-05 0.95 -250 12616 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDRVPPSR [R].qDRVPPSR.[N] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 1 3 3 0.5057 0 1 1 1 395.22977 1183.67475 1183.67449 0.22 0.00009 0/0 0 0 58800536 HCD 30 MS2 29.64655 382 19.984 30.3873 6009 6009 6008 QEplus033719.raw F4 387.8 240.2 496.9 423.4 390.4 353.2 240 2.65 3 FALSE 1.14E-05 0.0001095 0.85 -250 12623 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSGTSGVAQR [K].dSGTSGVAQR.[V] N-Term(TMT6plex) 2 Q3UXU8 CST complex subunit STN1 OS=Mus musculus OX=10090 GN=Stn1 PE=1 SV=1 Q3UXU8; Q8K2X3 CST complex subunit STN1 OS=Mus musculus OX=10090 GN=Stn1 PE=1 SV=1; CST complex subunit STN1 OS=Mus musculus OX=10090 GN=Stn1 PE=1 SV=2 0 2 2 0.6096 0 1 1 1 603.81812 1206.62895 1206.62759 1.13 0.00068 0/0 0 0 5040583.5 HCD 30 MS2 18.36201 223.4 110 30.3898 6010 6010 6008 QEplus033719.raw F4 248.5 203.1 212.5 186.1 283.7 206.6 202 2.92 1 FALSE 1.14E-05 2.67E-08 1.536 -250 12635 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEEMQR [K].nEEMQR.[S] N-Term(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 0 2 2 0.4739 0 1 1 1 518.25891 1035.51055 1035.50906 1.44 0.00074 0/0 0 0 42182376 HCD 30 MS2 15.13969 660 37.268 30.3943 6012 6012 6008 QEplus033719.raw F4 1205 81.8 421.7 1240.5 104.2 906.6 106 2.3 1 FALSE 0.004122 0.07553 0.073 -250 12638 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQPAPPR [K].rQPAPPR.[E] N-Term(TMT6plex) 2 Q9CQM8 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=1 Q4VA28; Q9CQM8 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=2 SV=1; 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=1 1 2 2 0.7452 0 1 1 1 525.82239 1050.6375 1050.63698 0.5 0.00026 0/0 0 0 16891510 HCD 30 MS2 16.96578 264.3 73.639 30.3966 6013 6013 6008 QEplus033719.raw F4 287.9 197.3 290.9 233.4 326.5 250.1 43 2.08 1 FALSE 0.008284 0.1421 -0.077 -250 12646 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGLDDER [R].rGLDDER.[G] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.1456 0 1 1 1 363.86639 1089.58463 1089.585 -0.34 -0.00012 0/0 0 0 9339466 HCD 30 MS2 28.45868 430.9 110 30.3991 6014 6014 6008 QEplus033719.raw F4 481.6 327.2 480 417.5 504.3 375 256 2.06 1 FALSE 0.007367 0.1187 -0.039 -250 12680 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQQEEMR [R].qQQEEMR.[Q] N-Term(TMT6plex) 14 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 Q9QXZ0-3; B1ARU4; E9QA63; A0A0A0MQH5; E9QNP1; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8 Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=6; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 2 2 0.6387 0 1 1 1 589.2959 1177.58452 1177.58329 1.05 0.00062 0/0 0 0 9172082 HCD 30 MS2 18.95252 417.6 110 30.4189 6021 6021 6019 QEplus033719.raw F4 474.9 193.3 504.2 462.2 295 576.2 98 2.74 3 FALSE 0.0002909 0.006015 0.478 -250 12699 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPNPAPGTR [K].rPNPAPGTR.[K] N-Term(TMT6plex) 2 Q8R378 Leucine-rich repeat protein SHOC-2 OS=Mus musculus OX=10090 GN=Shoc2 PE=2 SV=1 Q8R378; O88520 Leucine-rich repeat protein SHOC-2 OS=Mus musculus OX=10090 GN=Shoc2 PE=2 SV=1; Leucine-rich repeat protein SHOC-2 OS=Mus musculus OX=10090 GN=Shoc2 PE=1 SV=2 0 3 3 0.5428 0 1 1 1 398.9017 1194.69056 1194.69047 0.07 0.00003 0/0 0 0 8387066 HCD 30 MS2 25.2965 350.1 110 30.4259 6024 6024 6019 QEplus033719.raw F4 483.3 205.2 357.4 332.7 322.2 400 348 3.39 1 FALSE 1.14E-05 7.55E-07 1.261 -250 12715 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSSSYTR [-R].tSSSYTR.[R] N-Term(TMT6plex) 4 Q9DBR7 Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2 Q3TS88; Q9DBR7; A0A1W2P750; Q9DBR7-2 PRKG1_interact domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ppp1r12a PE=2 SV=1; Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2; Protein phosphatase 1 regulatory subunit 12A (Fragment) OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=1; Isoform 2 of Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a 0 2 2 0.5679 0 1 1 1 515.77283 1030.53838 1030.53665 1.67 0.00086 0/0 0 0 5699926 HCD 30 MS2 45.95321 487.3 110 30.4308 6026 6026 6019 QEplus033719.raw F4 629.3 429.8 575.4 405.6 482.6 401.3 130 2.43 1 FALSE 0.0002218 0.00463 0.51 -250 12727 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETAGSSGSTPEGR [K].eTAGSSGSTPEGR.[E] N-Term(TMT6plex) 3 Q3UM95 Spermatogenesis-defective protein 39 homolog OS=Mus musculus OX=10090 GN=Vipas39 PE=2 SV=1 Q3UM95; Q8BGQ1-2; Q8BGQ1 Spermatogenesis-defective protein 39 homolog OS=Mus musculus OX=10090 GN=Vipas39 PE=2 SV=1; Isoform 2 of Spermatogenesis-defective protein 39 homolog OS=Mus musculus OX=10090 GN=Vipas39; Spermatogenesis-defective protein 39 homolog OS=Mus musculus OX=10090 GN=Vipas39 PE=1 SV=1 0 2 2 0.7825 0 1 1 1 732.86151 1464.71575 1464.71278 2.02 0.00148 0/0 0 0 2486856.25 HCD 30 MS2 8.458287 69.7 110 30.4359 6028 6028 6019 QEplus033719.raw F4 79.7 71.1 68 54 74.9 70.3 125 4.23 1 FALSE 1.14E-05 6.01E-13 2.419 -250 12731 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQSAEAASEQR [K].sQSAEAASEQR.[S] N-Term(TMT6plex) 2 Q6PGL7 WASH complex subunit 2 OS=Mus musculus OX=10090 GN=Washc2 PE=1 SV=1 Q6PGL7; Q6PGL7-2 WASH complex subunit 2 OS=Mus musculus OX=10090 GN=Washc2 PE=1 SV=1; Isoform 2 of WASH complex subunit 2 OS=Mus musculus OX=10090 GN=Washc2 0 2 2 0.5333 0 1 1 1 696.84991 1392.69255 1392.69165 0.65 0.00045 0/0 0 0 1418559 HCD 30 MS2 26.09795 118.1 110 30.4384 6029 6029 6019 QEplus033719.raw F4 126.4 96.5 132.6 99.3 133.2 120.6 123 3.6 1 FALSE 1.14E-05 5.71E-10 1.853 -250 12756 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HHLDGETEEER [K].hHLDGETEEER.[I] N-Term(TMT6plex) 3 P10649 Glutathione S-transferase Mu 1 OS=Mus musculus OX=10090 GN=Gstm1 PE=1 SV=2 F6WHQ7; P10649; A2AE89 Glutathione S-transferase Mu 1 (Fragment) OS=Mus musculus OX=10090 GN=Gstm1 PE=1 SV=1; Glutathione S-transferase Mu 1 OS=Mus musculus OX=10090 GN=Gstm1 PE=1 SV=2; Glutathione transferase OS=Mus musculus OX=10090 GN=Gstm1 PE=1 SV=2 0 3 3 0.7539 0 1 1 1 527.58893 1580.75223 1580.75023 1.27 0.00067 0/0 0 0 35729568 HCD 30 MS2 8.413141 132.7 52.59 30.4525 6034 6034 6030 QEplus033719.raw F4 120.6 134.2 175.4 95.9 137.6 132.5 75 4.47 1 FALSE 1.14E-05 1.13E-11 2.177 -250 12760 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLHDEAR [R].qLHDEAR.[K] N-Term(TMT6plex) 2 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727; A0A286YDJ4 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4; Metavinculin (Fragment) OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=1 0 3 3 0.4079 0 1 1 1 366.53488 1097.59009 1097.59009 0 0 0/0 0 0 20761920 HCD 30 MS2 29.65033 402.6 60.75 30.4547 6035 6035 6030 QEplus033719.raw F4 856.9 212.4 422.7 317 236.8 370 126 3.04 1 FALSE 4.43E-05 0.001449 0.629 -250 12767 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIDNQEHR [K].aIDNQEHR.[R] N-Term(TMT6plex) 2 Q8K2F8 Protein LSM14 homolog A OS=Mus musculus OX=10090 GN=Lsm14a PE=1 SV=1 Q8K2F8; A0A0U1RP90 Protein LSM14 homolog A OS=Mus musculus OX=10090 GN=Lsm14a PE=1 SV=1; Protein LSM14 homolog A (Fragment) OS=Mus musculus OX=10090 GN=Lsm14a PE=1 SV=1 0 3 3 0.656 0 1 1 1 404.54941 1211.63367 1211.63301 0.54 0.00022 0/0 0 0 10491057 HCD 30 MS2 17.36644 295.8 110 30.4572 6036 6036 6030 QEplus033719.raw F4 424.1 194.4 325 250.5 313.7 267.1 188 4.36 1 FALSE 1.14E-05 5.97E-05 0.9 -250 12773 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHQDFSR [R].gHQDFSR.[Q] N-Term(TMT6plex) 1 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 0 2 2 0.4333 0 1 1 1 538.27856 1075.54985 1075.54822 1.52 0.00081 0/0 0 0 5719904.5 HCD 30 MS2 25.03682 442.5 110 30.4597 6037 6037 6030 QEplus033719.raw F4 485.7 334.9 421.5 395.1 695.4 322.4 160 2.4 1 FALSE 0.001903 0.03245 0.205 -250 12785 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HHLDGETEEER [K].hHLDGETEEER.[I] N-Term(TMT6plex) 3 P10649 Glutathione S-transferase Mu 1 OS=Mus musculus OX=10090 GN=Gstm1 PE=1 SV=2 F6WHQ7; P10649; A2AE89 Glutathione S-transferase Mu 1 (Fragment) OS=Mus musculus OX=10090 GN=Gstm1 PE=1 SV=1; Glutathione S-transferase Mu 1 OS=Mus musculus OX=10090 GN=Gstm1 PE=1 SV=2; Glutathione transferase OS=Mus musculus OX=10090 GN=Gstm1 PE=1 SV=2 0 2 2 0.7577 0 1 1 1 790.87915 1580.75102 1580.75023 0.5 0.0004 0/0 0 0 3467551.75 HCD 30 MS2 0 98.9 110 30.4647 6039 6039 6030 QEplus033719.raw F4 86.8 114 135.3 64.4 96.1 96.8 79 3.59 1 FALSE 1.14E-05 5.37E-10 1.858 -250 12789 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NETETAEER [R].nETETAEER.[V] N-Term(TMT6plex) 6 B2RWW2 Golgb1 protein OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1 B2RWW2; E9QAH1; Q571K1; E9PVZ8; Q6PAK0; Q8CGE5 "Golgb1 protein OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1; Golgi autoantigen, golgin subfamily b, macrogolgin 1 OS=Mus musculus OX=10090 GN=Golgb1 PE=1 SV=1; MKIAA4151 protein (Fragment) OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1; Golgi autoantigen, golgin subfamily b, macrogolgin 1 OS=Mus musculus OX=10090 GN=Golgb1 PE=1 SV=1; Golgb1 protein (Fragment) OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1; Golgb1 protein (Fragment) OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1" 0 2 2 0.6545 0 1 1 1 654.31818 1307.62908 1307.62765 1.09 0.00071 0/0 0 0 3324439.5 HCD 30 MS2 10.7372 184 110 30.4672 6040 6040 6030 QEplus033719.raw F4 175.7 169.6 187.7 155.1 223 192.8 68 3.56 1 FALSE 1.14E-05 1.09E-06 1.23 -250 12811 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHQDFSR [R].gHQDFSR.[Q] N-Term(TMT6plex) 1 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 0 3 3 0.6628 0 1 1 1 359.18771 1075.54859 1075.54822 0.34 0.00012 0/0 0 0 64117460 HCD 30 MS2 23.89956 246.8 16.035 30.4793 6044 6044 6041 QEplus033719.raw F4 297.7 163.2 242.5 234.3 340.7 202.4 155 2.61 1 FALSE 0.004222 0.07733 0.068 -250 12823 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEGEVAR [K].sEGEVAR.[C] N-Term(TMT6plex) 2 P50396 Rab GDP dissociation inhibitor alpha OS=Mus musculus OX=10090 GN=Gdi1 PE=1 SV=3 P50396; B7FAU8 Rab GDP dissociation inhibitor alpha OS=Mus musculus OX=10090 GN=Gdi1 PE=1 SV=3; Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi1 PE=1 SV=1 0 2 2 0.2479 0 1 1 1 488.76743 976.52757 976.52609 1.52 0.00074 0/0 0 0 19780234 HCD 30 MS2 7.732465 566.7 71.98 30.4838 6046 6046 6041 QEplus033719.raw F4 809.9 412.8 665.5 458 570.2 483.5 216 2.38 1 FALSE 0.003575 0.0683 0.092 -250 12829 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVEGER [R].eVEGER.[R] N-Term(TMT6plex) 5 Q8C7C3; Q58E70 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1 D3Z6I8; Q8C7C3; Q3TJ53; Q58E70; E9Q7Q3 Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1 0 2 2 0.1184 0 1 1 1 474.25369 947.50011 947.49954 0.6 0.00028 0/0 0 0 14960446 HCD 30 MS2 21.27743 640.6 85.751 30.486 6047 6047 6041 QEplus033719.raw F4 1096 572.2 733.2 414.4 478.5 549.1 144 2.28 2 FALSE 0.002071 0.03837 0.18 -250 12858 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYGSCSR [R].eYGScSR.[H] N-Term(TMT6plex); C5(Carbamidomethyl) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.3778 0 1 1 1 544.25635 1087.50542 1087.50397 1.33 0.00072 0/0 0 0 5715800 HCD 30 MS2 53.3636 681.4 110 30.4956 6051 6051 6041 QEplus033719.raw F4 771.1 549.1 717.9 716.7 763.5 570.2 17 2.25 2 FALSE 0.00315 0.06169 0.109 -250 12864 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDRVPPSR [R].qDRVPPSR.[N] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 1 2 2 0.396 0 1 1 1 592.34137 1183.67546 1183.67449 0.83 0.00049 0/0 0 0 4547689.5 HCD 30 MS2 0 91.6 110 30.503 6053 6053 6052 QEplus033719.raw F4 91.6 69.8 104 114.2 74.6 95.5 227 2.02 3 FALSE 0.0008991 0.01245 0.367 -250 12870 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGTTVASGGR [R].gGTTVASGGR.[F] N-Term(TMT6plex) 2 G3X8Y1 Tripartite motif-containing 55 OS=Mus musculus OX=10090 GN=Trim55 PE=1 SV=1 Q8C6Y1; G3X8Y1 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Trim55 PE=2 SV=1; Tripartite motif-containing 55 OS=Mus musculus OX=10090 GN=Trim55 PE=1 SV=1 0 2 2 0.4645 0 1 1 1 546.30438 1091.60149 1091.60065 0.77 0.00042 0/0 0 0 7552109.5 HCD 30 MS2 15.16626 406.9 110 30.5055 6054 6054 6052 QEplus033719.raw F4 551.5 144.2 471.5 527.3 189.6 557.4 245 2.82 1 FALSE 1.14E-05 7.92E-05 0.876 -250 12886 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTSPSSATRPQR [K].gTSPSSATRPQR.[V] N-Term(TMT6plex) 4 Q8BJ71 Nuclear pore complex protein Nup93 OS=Mus musculus OX=10090 GN=Nup93 PE=1 SV=1 Q8BJ71; Q3TFC8; Q8BJ71-2; A0A1D5RLQ0 Nuclear pore complex protein Nup93 OS=Mus musculus OX=10090 GN=Nup93 PE=1 SV=1; Nuclear pore complex protein Nup93 (Fragment) OS=Mus musculus OX=10090 GN=Nup93 PE=2 SV=1; Isoform 2 of Nuclear pore complex protein Nup93 OS=Mus musculus OX=10090 GN=Nup93; Nuclear pore complex protein Nup93 OS=Mus musculus OX=10090 GN=Nup93 PE=1 SV=1 0 3 3 0.4492 0 1 1 1 491.93759 1473.79822 1473.79712 0.75 0.00037 0/0 0 0 5393513 HCD 30 MS2 29.73245 270.3 110 30.5127 6057 6057 6052 QEplus033719.raw F4 316.4 205.7 303.7 222.9 316.2 256.6 338 3.74 1 FALSE 1.14E-05 2.49E-06 1.162 -250 12892 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQEAQEEER [K].eQEAQEEER.[R] N-Term(TMT6plex) 7 Q6ZQ32 MKIAA0858 protein (Fragment) OS=Mus musculus OX=10090 GN=Lmo7 PE=2 SV=1 Q6ZQ32; F6TFN2; E9PYI7; F6VG99; B7ZN52; E9PYF4; A0T1J8 MKIAA0858 protein (Fragment) OS=Mus musculus OX=10090 GN=Lmo7 PE=2 SV=1; LIM domain only 7 (Fragment) OS=Mus musculus OX=10090 GN=Lmo7 PE=1 SV=1; LIM domain only 7 OS=Mus musculus OX=10090 GN=Lmo7 PE=1 SV=1; LIM domain only 7 (Fragment) OS=Mus musculus OX=10090 GN=Lmo7 PE=1 SV=1; Lmo7 protein OS=Mus musculus OX=10090 GN=Lmo7 PE=2 SV=1; LIM domain only 7 OS=Mus musculus OX=10090 GN=Lmo7 PE=1 SV=1; LIM domain only 7 OS=Mus musculus OX=10090 GN=Lmo7 PE=2 SV=1 0 2 2 0.4957 0 1 1 1 688.82892 1376.65056 1376.64912 1.05 0.00072 0/0 0 0 4779104 HCD 30 MS2 0 122.6 110 30.5152 6058 6058 6052 QEplus033719.raw F4 163.5 76.3 113.6 143.1 106.4 132.8 48 3.51 1 FALSE 1.14E-05 7.97E-07 1.256 -250 12897 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQSAEAASEQR [K].sQSAEAASEQR.[S] N-Term(TMT6plex) 2 Q6PGL7 WASH complex subunit 2 OS=Mus musculus OX=10090 GN=Washc2 PE=1 SV=1 Q6PGL7; Q6PGL7-2 WASH complex subunit 2 OS=Mus musculus OX=10090 GN=Washc2 PE=1 SV=1; Isoform 2 of WASH complex subunit 2 OS=Mus musculus OX=10090 GN=Washc2 0 3 3 0.7403 0 1 1 1 464.90265 1392.69339 1392.69165 1.25 0.00058 0/0 0 0 4428524 HCD 30 MS2 5.290736 102.7 110 30.5177 6059 6059 6052 QEplus033719.raw F4 137.6 65.9 112.5 101 95.2 104.1 127 4.89 1 FALSE 1.14E-05 1.62E-07 1.387 -250 12904 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSPEPQR [R].tSPEPQR.[E] N-Term(TMT6plex) 7 Q9Z1R2 Large proline-rich protein BAG6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1 Q3TDL4; A0A1B0GX81; S4R224; Q9Z1R2; G3UZT6; G3UYQ2; Q3UF95 BCL2-associated athanogene 6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; Large proline-rich protein BAG6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; Large proline-rich protein BAG6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1 0 2 2 0.4469 0 1 1 1 522.28857 1043.56987 1043.56829 1.52 0.00079 0/0 0 0 3277116.5 HCD 30 MS2 29.33748 236.7 110 30.5202 6060 6060 6052 QEplus033719.raw F4 251.8 190.8 237.5 212.1 303.3 224.8 158 2.26 1 FALSE 0.005756 0.0965 0.016 -250 12918 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQGDAPNDPR [R].gQGDAPNDPR.[G] N-Term(TMT6plex) 1 A2AEK1 AlphaCstF-64 variant 4 OS=Mus musculus OX=10090 GN=Cstf2 PE=1 SV=1 A2AEK1 AlphaCstF-64 variant 4 OS=Mus musculus OX=10090 GN=Cstf2 PE=1 SV=1 0 2 2 0.4957 0 1 1 1 628.31512 1255.62297 1255.62284 0.1 0.00006 0/0 0 0 2879094.5 HCD 30 MS2 0 138.4 110 30.5252 6062 6062 6052 QEplus033719.raw F4 147.3 141.5 126.9 122.8 172.7 119.4 111 2.34 1 FALSE 5.44E-05 0.002019 0.598 -250 12931 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIDNQEHR [K].aIDNQEHR.[R] N-Term(TMT6plex) 2 Q8K2F8 Protein LSM14 homolog A OS=Mus musculus OX=10090 GN=Lsm14a PE=1 SV=1 Q8K2F8; A0A0U1RP90 Protein LSM14 homolog A OS=Mus musculus OX=10090 GN=Lsm14a PE=1 SV=1; Protein LSM14 homolog A (Fragment) OS=Mus musculus OX=10090 GN=Lsm14a PE=1 SV=1 0 2 2 0.6482 0 1 1 1 606.32092 1211.63457 1211.63301 1.28 0.00078 0/0 0 0 2799483 HCD 30 MS2 0 161.8 110 30.5351 6065 6065 6063 QEplus033719.raw F4 148.5 90.5 154 126.5 181.3 269.7 177 3.07 1 FALSE 1.14E-05 0.0005026 0.722 -250 12939 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGDRGDRLER [K].aGDRGDRLER.[S] N-Term(TMT6plex) 9 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 Q8R2V4; Q6NZJ6-2; E9Q9E1; Q6PD42; E9PVC5; E9PVC6; A0A0J9YUS5; Q6NZJ6; Q8K0J8 Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 2 3 3 0.2786 0 1 1 1 458.58652 1373.745 1373.74469 0.22 0.0001 0/0 0 0 7638471.5 HCD 30 MS2 20.02799 284.1 110 30.5421 6068 6068 6063 QEplus033719.raw F4 281.7 223.8 286.8 254.5 366.8 291.3 337 3.59 1 FALSE 0.0005556 0.008442 0.431 -250 12951 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAEDDGEEDDD [R].dAEDDGEEDDD.[-] N-Term(TMT6plex) 6 P97822 Acidic leucine-rich nuclear phosphoprotein 32 family member E OS=Mus musculus OX=10090 GN=Anp32e PE=1 SV=2 P97822-2; P97822-3; A0A0G2JEK9; E9Q0X5; P97822; E9Q2G1 Isoform 2 of Acidic leucine-rich nuclear phosphoprotein 32 family member E OS=Mus musculus OX=10090 GN=Anp32e; Isoform 3 of Acidic leucine-rich nuclear phosphoprotein 32 family member E OS=Mus musculus OX=10090 GN=Anp32e; Acidic leucine-rich nuclear phosphoprotein 32 family member E OS=Mus musculus OX=10090 GN=Anp32e PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member E OS=Mus musculus OX=10090 GN=Anp32e PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member E OS=Mus musculus OX=10090 GN=Anp32e PE=1 SV=2; Acidic leucine-rich nuclear phosphoprotein 32 family member E OS=Mus musculus OX=10090 GN=Anp32e PE=1 SV=1 0 2 2 1 0 1 1 1 727.26917 1453.53105 1453.52879 1.56 0.00113 0/0 0 0 4612775 HCD 30 MS2 3.761617 63.7 110 30.5471 6070 6070 6063 QEplus033719.raw F4 63.2 66.3 66.4 37.6 94.6 54.1 1 3.74 1 FALSE 1.14E-05 6.51E-05 0.893 -250 12952 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAAAHTDHLR [R].qAAAHTDHLR.[D] N-Term(TMT6plex) 13 Q8CAQ8; A0A0U1RP81 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1;MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q3U7N2; Q6P8Y5; Q8CAQ8; E9QAY6; Q8CAQ8-2; A0A0U1RP81; Q3TVZ5; Q2YDW0; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1 0 3 3 0.7151 0 1 1 1 450.24786 1348.72904 1348.72831 0.54 0.00024 0/0 0 0 4443118 HCD 30 MS2 15.99368 228 110 30.5496 6071 6071 6063 QEplus033719.raw F4 262 150.7 234.4 252.8 241.8 226.3 299 5.09 2 FALSE 1.14E-05 1.96E-12 2.321 -250 12961 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPEGPQGQR [R].gPEGPQGQR.[G] N-Term(TMT6plex) 1 Q3U962 Collagen alpha-2(V) chain OS=Mus musculus OX=10090 GN=Col5a2 PE=1 SV=1 Q3U962 Collagen alpha-2(V) chain OS=Mus musculus OX=10090 GN=Col5a2 PE=1 SV=1 0 2 2 0.6537 0 1 1 1 577.80963 1154.61199 1154.61155 0.38 0.00022 0/0 0 0 4356868 HCD 30 MS2 18.60679 354.2 110 30.5521 6072 6072 6063 QEplus033719.raw F4 385.9 281.5 363 330.9 461.8 302.4 159 2.57 1 FALSE 1.14E-05 5.11E-06 1.103 -250 12977 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPGSGQVNSSR [K].qPGSGQVNSSR.[Y] N-Term(TMT6plex) 2 Q91YI7 Zfp36l1 protein OS=Mus musculus OX=10090 GN=Zfp36l1 PE=2 SV=1 Q91YI7; P23950 Zfp36l1 protein OS=Mus musculus OX=10090 GN=Zfp36l1 PE=2 SV=1; mRNA decay activator protein ZFP36L1 OS=Mus musculus OX=10090 GN=Zfp36l1 PE=1 SV=1 0 2 2 0.6656 0 1 1 1 673.35541 1345.70354 1345.70216 1.03 0.00069 0/0 0 0 2706542.5 HCD 30 MS2 30.99154 100.5 110 30.5619 6075 6075 6074 QEplus033719.raw F4 113.5 77.9 96.2 75.3 134.4 105.5 202 3.17 1 FALSE 1.14E-05 9.94E-08 1.428 -250 12986 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESDSVSTR [K].eSDSVSTR.[D] N-Term(TMT6plex) 4 Q70FJ1 A-kinase anchor protein 9 OS=Mus musculus OX=10090 GN=Akap9 PE=1 SV=2 Q70FJ1; E9QQ10; Q70FJ1-2; Q70FJ1-3 A-kinase anchor protein 9 OS=Mus musculus OX=10090 GN=Akap9 PE=1 SV=2; A-kinase anchor protein 9 OS=Mus musculus OX=10090 GN=Akap9 PE=1 SV=1; Isoform 2 of A-kinase anchor protein 9 OS=Mus musculus OX=10090 GN=Akap9; Isoform 3 of A-kinase anchor protein 9 OS=Mus musculus OX=10090 GN=Akap9 0 2 2 0.5163 0 1 1 1 555.28735 1109.56743 1109.5636 3.45 0.00192 0/0 0 0 1549030.875 HCD 30 MS2 19.03922 158 110 30.5644 6076 6076 6074 QEplus033719.raw F4 177.6 132.9 171.1 113.1 212.4 140.8 123 2.46 1 FALSE 1.14E-05 0.0004683 0.728 -250 12996 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNYAER [K].gNYAER.[V] N-Term(TMT6plex) 6 Q149V4 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1 Q149V4; Q64522; Q8R1M2; A0A0N4SV66; Q64426; Q6GSS7 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1; Histone H2A type 2-B OS=Mus musculus OX=10090 GN=H2ac21 PE=1 SV=3; Histone H2A.J OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A (Fragment) OS=Mus musculus domesticus OX=10092 GN=H2A PE=2 SV=1; Histone H2A type 2-A OS=Mus musculus OX=10090 GN=Hist2h2aa1 PE=1 SV=3 0 2 2 0.2182 0 1 1 1 469.7489 938.49053 938.48931 1.3 0.00061 0/0 0 0 21915940 HCD 30 MS2 31.32103 829.3 46.385 30.5689 6078 6078 6074 QEplus033719.raw F4 894.9 744.3 925.5 644.3 1116.6 649.9 47 2.2 1 FALSE 0.004749 0.08338 0.052 -250 13006 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CLAQHGR [R].cLAQHGR.[F] N-Term(TMT6plex); C1(Carbamidomethyl) 4 Q3UHT6 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1 Q3UHT6; P19096; Q3TB22; A0A0U1RNJ1 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2; Fatty acid synthase (Fragment) OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=1 0 3 3 0.5349 0 1 1 1 357.52899 1070.57242 1070.57266 -0.23 -0.00008 0/0 0 0 20629512 HCD 30 MS2 40.46147 151.5 58.125 30.5712 6079 6079 6074 QEplus033719.raw F4 272 92.4 158.5 125.5 126.9 133.8 84 3.44 1 FALSE 0.0003496 0.006821 0.462 -250 13012 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAAVAASSSS [K].rAAVAASSSS.[-] N-Term(TMT6plex) 1 Q9D823 60S ribosomal protein L37 OS=Mus musculus OX=10090 GN=Rpl37 PE=1 SV=3 Q9D823 60S ribosomal protein L37 OS=Mus musculus OX=10090 GN=Rpl37 PE=1 SV=3 1 2 2 0.8386 0 1 1 1 568.31787 1135.62847 1135.62687 1.41 0.0008 0/0 0 0 13628371 HCD 30 MS2 12.80214 223.8 110 30.5737 6080 6080 6074 QEplus033719.raw F4 319.2 168.2 262.4 191 200.2 201.6 266 2.54 1 FALSE 0.001117 0.01469 0.336 -250 13029 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAAVEQR [R].nAAVEQR.[L] N-Term(TMT6plex) 6 E9Q3Z5 Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1 E9Q3Z5; E3VVQ8; Q8K4L2; Q8K4L3; Q8K4L3-3; A0A1B0GS91 Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin muscle-specific isoform OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1; Archvillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Isoform 2 of Supervillin OS=Mus musculus OX=10090 GN=Svil; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1 0 2 2 0.3054 0 1 1 1 508.78854 1016.56981 1016.56862 1.17 0.00059 0/0 0 0 9766507 HCD 30 MS2 30.90078 504.2 110 30.5834 6084 6084 6074 QEplus033719.raw F4 695.7 342.9 613.1 436 425.5 512 263 2.39 1 FALSE 7.59E-05 0.00276 0.567 -250 13036 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECPPHTEQR [R].ecPPHTEQR.[Q] N-Term(TMT6plex); C2(Carbamidomethyl) 2 Q3TDL0 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Cops7b PE=2 SV=1 Q3TDL0; Q8BV13 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Cops7b PE=2 SV=1; COP9 signalosome complex subunit 7b OS=Mus musculus OX=10090 GN=Cops7b PE=1 SV=1 0 3 3 0.6362 0 1 1 1 461.56137 1382.66956 1382.66841 0.83 0.00038 0/0 0 0 17280440 HCD 30 MS2 16.43989 317.1 94.066 30.5907 6086 6086 6085 QEplus033719.raw F4 465.3 227.5 352.6 227.8 286 343.5 104 4.59 1 FALSE 1.14E-05 2.66E-08 1.536 -250 13057 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TENAVSR [K].tENAVSR.[M] N-Term(TMT6plex) 3 Q8BU30 "Isoleucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Iars1 PE=1 SV=2" G8DYH0; G8DYK0; Q8BU30 "Isoleucine-tRNA synthetase (Fragment) OS=Mus musculus musculus OX=39442 GN=Iars PE=4 SV=1; Isoleucine-tRNA synthetase (Fragment) OS=Mus musculus castaneus OX=10091 GN=Iars PE=4 SV=1; Isoleucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Iars1 PE=1 SV=2" 0 2 2 0.3158 0 1 1 1 503.28058 1005.55388 1005.55264 1.23 0.00062 0/0 0 0 5990287.5 HCD 30 MS2 33.65864 399.9 110 30.6029 6091 6091 6085 QEplus033719.raw F4 601.2 282.2 466.9 380.4 310.2 358.5 266 2.28 1 FALSE 0.0001603 0.003661 0.537 -250 13066 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AASEAGGPAR [R].aASEAGGPAR.[L] N-Term(TMT6plex) 2 P35569 Insulin receptor substrate 1 OS=Mus musculus OX=10090 GN=Irs1 PE=1 SV=1 P35569; Q543V3 Insulin receptor substrate 1 OS=Mus musculus OX=10090 GN=Irs1 PE=1 SV=1; Insulin receptor substrate 1 OS=Mus musculus OX=10090 GN=Irs1 PE=1 SV=1 0 2 2 0.3832 0 1 1 1 558.30524 1115.6032 1115.60065 2.28 0.00127 0/0 0 0 4375641 HCD 30 MS2 20.81216 262.8 110 30.6054 6092 6092 6085 QEplus033719.raw F4 278.7 248.1 267.8 171.5 401.5 209.3 141 3.21 1 FALSE 1.14E-05 1.53E-08 1.582 -250 13073 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQAGTPASDGSR [R].eQAGTPASDGSR.[G] N-Term(TMT6plex) 5 A0A1Y7VLC3 Junction-mediating and -regulatory protein OS=Mus musculus OX=10090 GN=Jmy PE=1 SV=1 Q9QXM1-2; A0A1Y7VLC3; Q9QXM1; Q9QXM1-3; A0A0R4J0V4 Isoform 2 of Junction-mediating and -regulatory protein OS=Mus musculus OX=10090 GN=Jmy; Junction-mediating and -regulatory protein OS=Mus musculus OX=10090 GN=Jmy PE=1 SV=1; Junction-mediating and -regulatory protein OS=Mus musculus OX=10090 GN=Jmy PE=1 SV=1; Isoform 3 of Junction-mediating and -regulatory protein OS=Mus musculus OX=10090 GN=Jmy; Junction-mediating and -regulatory protein OS=Mus musculus OX=10090 GN=Jmy PE=1 SV=1 0 2 2 0.6459 0 1 1 1 702.8504 1404.69353 1404.69165 1.34 0.00094 0/0 0 0 3709034 HCD 30 MS2 0 78.6 110 30.6079 6093 6093 6085 QEplus033719.raw F4 92 63.5 82.8 67.8 85.6 79.7 110 3.05 1 FALSE 1.14E-05 1.60E-09 1.768 -250 13080 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLRDDRDR [R].dLRDDRDR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; A0A494B9I0 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Eukaryotic translation initiation factor 3 subunit A (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=1 2 3 3 0.3497 0 1 1 1 430.56314 1289.67487 1289.67594 -0.83 -0.00036 0/0 0 0 3274702.25 HCD 30 MS2 46.77588 373.7 110 30.6104 6094 6094 6085 QEplus033719.raw F4 450.7 301.3 472.7 285 364.2 368.2 237 2.86 1 FALSE 0.001567 0.02379 0.252 -250 13093 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CQQCEDQQREEATR [R].cQQcEDQQREEATR.[L] N-Term(TMT6plex); C1(Carbamidomethyl); C4(Carbamidomethyl) 10 H7BX64 Sarcolemmal membrane-associated protein OS=Mus musculus OX=10090 GN=Slmap PE=1 SV=1 Q3URD3-4; Q3URD3-5; H7BX64; F6YCM8; F8WIH0; D3Z7V3; F6UV57; Q3URD3-3; Q3URD3-2; Q3URD3 Isoform 4 of Sarcolemmal membrane-associated protein OS=Mus musculus OX=10090 GN=Slmap; Isoform 5 of Sarcolemmal membrane-associated protein OS=Mus musculus OX=10090 GN=Slmap; Sarcolemmal membrane-associated protein OS=Mus musculus OX=10090 GN=Slmap PE=1 SV=1; Sarcolemmal membrane-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Slmap PE=1 SV=1; Sarcolemmal membrane-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Slmap PE=1 SV=1; Sarcolemmal membrane-associated protein OS=Mus musculus OX=10090 GN=Slmap PE=1 SV=1; Sarcolemmal membrane-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Slmap PE=1 SV=1; Isoform 3 of Sarcolemmal membrane-associated protein OS=Mus musculus OX=10090 GN=Slmap; Isoform 2 of Sarcolemmal membrane-associated protein OS=Mus musculus OX=10090 GN=Slmap; Sarcolemmal membrane-associated protein OS=Mus musculus OX=10090 GN=Slmap PE=1 SV=2 1 3 3 0.706 0 1 1 1 689.6452 2066.92105 2066.91812 1.42 0.00098 0/0 0 0 2898032.5 HCD 30 MS2 7.550261 58.4 110 30.6228 6098 6098 6096 QEplus033719.raw F4 60.1 40.8 68 64.7 50.9 66.1 24 4.66 1 FALSE 1.14E-05 1.08E-11 2.181 -250 13108 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQLQEANR [R].hQLQEANR.[N] N-Term(TMT6plex) 5 A0A0R4J140 Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=1 A0A0R4J140; Q5SW19-3; Z4YLI8; Q6P7U7; Q5SW19 Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=1; Isoform 3 of Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh; Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=1; 1300001I01Rik protein (Fragment) OS=Mus musculus OX=10090 GN=Cluh PE=2 SV=1; Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=2 0 2 2 0.7172 0 1 1 1 612.83673 1224.66619 1224.66465 1.25 0.00077 0/0 0 0 2568265.25 HCD 30 MS2 6.289169 135.4 110 30.6276 6100 6100 6096 QEplus033719.raw F4 155.9 75.7 157.2 117.9 135.3 170.6 236 2.9 1 FALSE 1.14E-05 0.0002611 0.777 -250 13121 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAGAPQATR [R].qAGAPQATR.[Q] N-Term(TMT6plex) 3 O88935-1 Isoform Ib of Synapsin-1 OS=Mus musculus OX=10090 GN=Syn1 O88935-3; O88935-1; O88935 Isoform 3 of Synapsin-1 OS=Mus musculus OX=10090 GN=Syn1; Isoform Ib of Synapsin-1 OS=Mus musculus OX=10090 GN=Syn1; Synapsin-1 OS=Mus musculus OX=10090 GN=Syn1 PE=1 SV=2 0 2 2 0.4561 0 1 1 1 564.82025 1128.63323 1128.63229 0.83 0.00047 0/0 0 0 2364285.25 HCD 30 MS2 8.52303 193.9 110 30.6326 6102 6102 6096 QEplus033719.raw F4 246.8 155.9 175.7 167.8 246.3 171.1 208 2.39 1 FALSE 0.001343 0.01898 0.29 -250 13129 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSQNLNQQQR [R].nSQNLNQQQR.[E] N-Term(TMT6plex) 7 Q8CIG5 Vps8 protein OS=Mus musculus OX=10090 GN=Vps8 PE=2 SV=1 Q0P5W1-2; Q8CIG5; F6ZLN8; D3YUP0; F8WI64; Q0P5W1; Q0P5W1-3 Isoform 2 of Vacuolar protein sorting-associated protein 8 homolog OS=Mus musculus OX=10090 GN=Vps8; Vps8 protein OS=Mus musculus OX=10090 GN=Vps8 PE=2 SV=1; Vacuolar protein sorting-associated protein 8 homolog (Fragment) OS=Mus musculus OX=10090 GN=Vps8 PE=1 SV=1; Vacuolar protein sorting-associated protein 8 homolog OS=Mus musculus OX=10090 GN=Vps8 PE=1 SV=1; Vacuolar protein sorting-associated protein 8 homolog OS=Mus musculus OX=10090 GN=Vps8 PE=1 SV=2; Vacuolar protein sorting-associated protein 8 homolog OS=Mus musculus OX=10090 GN=Vps8 PE=1 SV=1; Isoform 3 of Vacuolar protein sorting-associated protein 8 homolog OS=Mus musculus OX=10090 GN=Vps8 0 2 2 0.4728 0 1 1 1 729.88397 1458.76067 1458.76107 -0.27 -0.0002 0/0 0 0 2136090.75 HCD 30 MS2 0 64.3 110 30.6376 6104 6104 6096 QEplus033719.raw F4 68.7 60.7 69.8 54.1 75.6 57.1 243 2.94 1 FALSE 1.14E-05 2.09E-06 1.177 -250 13147 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSSTSESGDSDNMR [K].sSSTSESGDSDNMR.[I] N-Term(TMT6plex) 6 E9Q804 Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=3 E9Q804; Q99NH0-2; A0A0G2JDZ9; Q3U5I3; Q99NH0; E9QKG6 Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=3; Isoform 2 of Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17; Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=1; ANK_REP_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ankrd17 PE=2 SV=1; Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=2; Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=1 0 2 2 0.9153 0 1 1 1 844.8667 1688.72612 1688.72309 1.8 0.00152 0/0 0 0 959995.125 HCD 30 MS2 0 37.7 110 30.6426 6106 6106 6096 QEplus033719.raw F4 38 37.1 38.4 23.3 57.3 32 11 4.13 1 FALSE 1.14E-05 1.36E-13 2.542 -250 13153 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EESYSR [R].eESYSR.[M] N-Term(TMT6plex) 3 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q810V5; Q8VIJ6; Q7TMH7 "Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1; Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1" 0 2 2 0.6213 0 1 1 1 500.2515 999.49571 999.49446 1.26 0.00063 0/0 0 0 25245300 HCD 30 MS2 4.310282 474.2 51.05 30.6499 6108 6108 6107 QEplus033719.raw F4 483.9 470.9 504.8 368.6 633.5 383.4 36 2.35 1 FALSE 0.006363 0.1027 -0.001 -250 13164 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEADRDTYR [R].gEADRDTYR.[R] N-Term(TMT6plex) 4 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" P63325; Q3UW83; A0A338P7K4; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 1 3 3 0.5611 0 1 1 1 437.88843 1311.65073 1311.64906 1.27 0.00056 0/0 0 0 28171858 HCD 30 MS2 19.20778 509 40.888 30.6547 6110 6110 6107 QEplus033719.raw F4 957.4 312 434.7 402 385.9 562 130 2.62 2 FALSE 0.0006216 0.00924 0.417 -250 13171 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEEGRDMANR [R].sEEGRDMANR.[I] N-Term(TMT6plex) 1 Q62159 Rho-related GTP-binding protein RhoC OS=Mus musculus OX=10090 GN=Rhoc PE=1 SV=2 Q62159 Rho-related GTP-binding protein RhoC OS=Mus musculus OX=10090 GN=Rhoc PE=1 SV=2 1 3 3 0.5392 0 1 1 1 465.22919 1393.67301 1393.66914 2.77 0.00129 0/0 0 0 18547574 HCD 30 MS2 6.955777 421.3 86.453 30.6569 6111 6111 6107 QEplus033719.raw F4 411 426.3 458.1 266.7 605.4 360.2 94 3.32 1 FALSE 5.44E-05 0.001882 0.604 -250 13184 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLASGSTDR [K].rLASGSTDR.[H] N-Term(TMT6plex) 1 Q4V9X1 Ribosome biogenesis protein WDR12 OS=Mus musculus OX=10090 GN=Wdr12 PE=1 SV=1 Q4V9X1 Ribosome biogenesis protein WDR12 OS=Mus musculus OX=10090 GN=Wdr12 PE=1 SV=1 1 3 3 0.4286 0 1 1 1 397.89325 1191.6652 1191.66431 0.74 0.00029 0/0 0 0 10052449 HCD 30 MS2 60.29317 336.9 74.845 30.6614 6113 6113 6107 QEplus033719.raw F4 416.6 249.5 387.6 288 360.8 318.8 385 3.36 1 FALSE 5.44E-05 0.001849 0.606 -250 13192 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDTSGDYR [K].gDTSGDYR.[K] N-Term(TMT6plex) 3 Q7TMN7 Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1 Q7TMN7; F7ANV6; P97429 Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin A4 OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=4 0 2 2 0.572 0 1 1 1 550.26526 1099.52324 1099.52173 1.37 0.00075 0/0 0 0 7883653.5 HCD 30 MS2 23.01623 449.7 110 30.6639 6114 6114 6107 QEplus033719.raw F4 469.8 418.9 533.6 433.4 471.8 371 30 2.43 1 FALSE 0.0003496 0.006628 0.465 -250 13199 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHMQPTHPIR [K].eHmQPTHPIR.[L] N-Term(TMT6plex); M3(Oxidation) 2 P68510; A8IP69 14-3-3 protein eta OS=Mus musculus OX=10090 GN=Ywhah PE=1 SV=2;14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 P68510; A8IP69 14-3-3 protein eta OS=Mus musculus OX=10090 GN=Ywhah PE=1 SV=2; 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 0 4 4 0.5547 0 1 1 1 373.44913 1490.77468 1490.77355 0.76 0.00028 0/0 0 0 6749473 HCD 30 MS2 53.8659 306.1 110 30.6664 6115 6115 6107 QEplus033719.raw F4 504.3 190.8 301.3 270.2 290.4 279.5 256 4.02 2 FALSE 1.14E-05 4.85E-07 1.297 -250 13204 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPSSSQPER [K].tPSSSQPER.[L] N-Term(TMT6plex) 2 Q922U1 U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=1 SV=1 Q922U1; Q3UT19 U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=1 SV=1; Pre-mRNA-splicing factor 3 OS=Mus musculus OX=10090 GN=Prpf3 PE=2 SV=1 0 2 2 0.5277 0 1 1 1 609.32074 1217.6342 1217.63235 1.53 0.00093 0/0 0 0 4577765 HCD 30 MS2 64.17615 327.3 110 30.6689 6116 6116 6107 QEplus033719.raw F4 356.2 288.7 343 283.9 398.6 293.4 184 2.71 1 FALSE 1.14E-05 0.0002621 0.777 -250 13210 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CEGSSVQTR [R].cEGSSVQTR.[T] N-Term(TMT6plex); C1(Carbamidomethyl) 5 Q28194 TREMBL:Q28194 (Bos taurus) Thrombospondin-1 Q28194; Q3TR40; P35441; Q8CGB2; Q80YQ1 TREMBL:Q28194 (Bos taurus) Thrombospondin-1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Thbs1 PE=2 SV=1; Thrombospondin-1 OS=Mus musculus OX=10090 GN=Thbs1 PE=1 SV=1; Thrombospondin 1 OS=Mus musculus OX=10090 GN=Thbs1 PE=2 SV=1; Thrombospondin-1 OS=Mus musculus OX=10090 GN=Thbs1 PE=1 SV=1 0 2 2 0.593 0 1 1 1 626.81189 1252.6165 1252.61532 0.95 0.00059 0/0 0 0 4196164 HCD 30 MS2 12.13875 219.7 110 30.6714 6117 6117 6107 QEplus033719.raw F4 195 163 165.5 144.1 480.2 170.3 108 2.85 1 TRUE 1.14E-05 3.39E-05 0.947 -250 13223 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEADRDTYR [R].gEADRDTYR.[R] N-Term(TMT6plex) 4 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" P63325; Q3UW83; A0A338P7K4; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 1 2 2 0.6754 0 1 1 1 656.32916 1311.65105 1311.64906 1.52 0.001 0/0 0 0 6762197.5 HCD 30 MS2 0 123.7 110 30.6813 6120 6120 6118 QEplus033719.raw F4 168.8 92.1 120.2 119.8 112.2 129.3 130 2.68 2 FALSE 1.14E-05 0.0003877 0.744 -250 13229 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTYEGSR [K].dTYEGSR.[D] N-Term(TMT6plex) 2 Q99P72 Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4 PE=1 SV=2 Q99P72-3; Q99P72 Isoform D of Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4; Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4 PE=1 SV=2 0 2 2 0.6833 0 1 1 1 528.76215 1056.51702 1056.51592 1.04 0.00055 0/0 0 0 28798460 HCD 30 MS2 7.458346 613.5 50.17 30.6835 6121 6121 6118 QEplus033719.raw F4 736.5 202.6 620.1 903.7 403.4 814.4 50 3 1 FALSE 0.0006216 0.009196 0.418 -250 13236 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHAHLDTGR [R].aHAHLDTGR.[R] N-Term(TMT6plex) 3 A1A4T2 Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1 Q8BHN3-3; A1A4T2; Q8BHN3 Isoform 3 of Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab; Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab PE=1 SV=1 0 3 3 0.7015 0 1 1 1 402.88998 1206.6554 1206.65408 1.09 0.00044 0/0 0 0 21040672 HCD 30 MS2 20.72331 287.4 44.242 30.6858 6122 6122 6118 QEplus033719.raw F4 414.2 182.2 322.3 249.1 267.2 289.5 261 4.12 1 FALSE 1.14E-05 8.97E-08 1.436 -250 13245 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRTPAAVR [R].nRTPAAVR.[E] N-Term(TMT6plex) 3 Q9EST5 Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Mus musculus OX=10090 GN=Anp32b PE=1 SV=1 Q9EST5; Q3UW32; Q9EST5-2 Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Mus musculus OX=10090 GN=Anp32b PE=1 SV=1; LRRcap domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Anp32b PE=2 SV=1; Isoform 2 of Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Mus musculus OX=10090 GN=Anp32b 1 3 3 0.4901 0 1 1 1 371.89474 1113.66968 1113.66901 0.61 0.00023 0/0 0 0 19569674 HCD 30 MS2 25.74289 350.9 55.67 30.688 6123 6123 6118 QEplus033719.raw F4 408.9 316 362.7 236.5 492.6 288.7 144 3.55 1 FALSE 7.59E-05 0.002814 0.565 -250 13248 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISTQNRR [K].iSTQNRR.[A] N-Term(TMT6plex) 4 Q3ULJ5 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 Q3ULJ5; Q3U5M8; P14685; Q8BK46 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus OX=10090 GN=Psmd3 PE=1 SV=3; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 1 3 3 0.377 0 1 1 1 368.5546 1103.64923 1103.64827 0.87 0.00032 0/0 0 0 11141354 HCD 30 MS2 24.51677 468.3 86.094 30.6903 6124 6124 6118 QEplus033719.raw F4 514.9 286.2 736.3 463.6 314.9 493.7 304 2.44 1 FALSE 0.003793 0.07182 0.083 -250 13267 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTPAEQER [K].tTPAEQER.[V] N-Term(TMT6plex) 3 Q8BU03 Periodic tryptophan protein 2 homolog OS=Mus musculus OX=10090 GN=Pwp2 PE=1 SV=1 Q8BU03; A1A596; Q8R538 Periodic tryptophan protein 2 homolog OS=Mus musculus OX=10090 GN=Pwp2 PE=1 SV=1; Pwp2 protein OS=Mus musculus OX=10090 GN=Pwp2 PE=2 SV=1; WD-repeat protein p103 OS=Mus musculus OX=10090 GN=Pwp2 PE=2 SV=1 0 2 2 0.5341 0 1 1 1 580.80957 1160.61186 1160.61088 0.85 0.00049 0/0 0 0 6348977 HCD 30 MS2 0 369.3 110 30.6978 6127 6127 6118 QEplus033719.raw F4 424.1 310.1 376.3 297 472.6 335.5 234 2.79 1 FALSE 0.0003408 0.006427 0.47 -250 13271 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAEPCGGAAR [K].gAEPcGGAAR.[G] N-Term(TMT6plex); C5(Carbamidomethyl) 3 Q9D1C1 Ubiquitin-conjugating enzyme E2 C OS=Mus musculus OX=10090 GN=Ube2c PE=1 SV=1 Q9D1C1; Q3UWQ1; A2A4Z1 Ubiquitin-conjugating enzyme E2 C OS=Mus musculus OX=10090 GN=Ube2c PE=1 SV=1; UBC core domain-containing protein OS=Mus musculus OX=10090 GN=Ube2c PE=2 SV=1; Ubiquitin-conjugating enzyme E2 C OS=Mus musculus OX=10090 GN=Ube2c PE=1 SV=1 0 2 2 0.7479 0 1 1 1 587.79596 1174.58464 1174.58362 0.87 0.00051 0/0 0 0 6212612.5 HCD 30 MS2 45.53343 351.4 110 30.7003 6128 6128 6118 QEplus033719.raw F4 402.7 150.3 200.9 157.3 902.4 294.8 76 3.49 1 FALSE 1.14E-05 5.99E-05 0.9 -250 13281 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRESYETCR [R].qRESYETcR.[R] N-Term(TMT6plex); C8(Carbamidomethyl) 1 Q059G7 Mitochondrial ribosomal protein S21 OS=Mus musculus OX=10090 GN=Mrps21 PE=1 SV=1 Q059G7 Mitochondrial ribosomal protein S21 OS=Mus musculus OX=10090 GN=Mrps21 PE=1 SV=1 1 3 3 0.6594 0 1 1 1 486.57263 1457.70334 1457.70044 1.99 0.00097 0/0 0 0 2733627.25 HCD 30 MS2 49.32573 198.4 110 30.7101 6131 6131 6129 QEplus033719.raw F4 214.4 157.9 202.7 191.6 234.7 189.2 68 3.2 1 FALSE 0.002024 0.03533 0.192 -250 13286 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRAEVSQPR [K].nRAEVSQPR.[L] N-Term(TMT6plex) 2 A0A1S6GWH5 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1 A0A1S6GWH5; Q02053 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1; Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus OX=10090 GN=Uba1 PE=1 SV=1 1 3 3 0.4272 0 1 1 1 429.24469 1285.71952 1285.71741 1.64 0.0007 0/0 0 0 100744520 HCD 30 MS2 7.070863 233.7 12.523 30.7124 6132 6132 6129 QEplus033719.raw F4 269.3 177.7 240.7 179.8 292.9 241.8 292 4.12 1 FALSE 1.14E-05 0.0001504 0.823 -250 13293 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDTEEHHLR [K].eDTEEHHLR.[D] N-Term(TMT6plex) 12 O88569; Q3UK83 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2;Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1 O88569-3; B7ZP22; O88569; A0A0N4SUM2; Q3TFB1; Q3UK83; P49312; Q3U7F3; P49312-2; Q3TIK8; Q5EBP8; O88569-2 Isoform 3 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2; Heterogeneous nuclear ribonucleoproteins A2/B1 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=2; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Isoform Short of Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 0 3 3 0.6681 0 1 1 1 465.56741 1394.68769 1394.68617 1.09 0.0005 0/0 0 0 36717748 HCD 30 MS2 26.91329 335.1 33.708 30.7146 6133 6133 6129 QEplus033719.raw F4 350.1 301.1 339.1 246.1 469.9 304.1 122 4.55 2 FALSE 1.14E-05 9.60E-09 1.621 -250 13304 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPVSHPQR [R].tPVSHPQR.[M] N-Term(TMT6plex) 3 A0A1B0GR85 RIKEN cDNA 2900026A02 gene OS=Mus musculus OX=10090 GN=2900026A02Rik PE=1 SV=1 A0A1D5RLN6; A0A1B0GR85; Q8BRV5 RIKEN cDNA 2900026A02 gene OS=Mus musculus OX=10090 GN=2900026A02Rik PE=1 SV=1; RIKEN cDNA 2900026A02 gene OS=Mus musculus OX=10090 GN=2900026A02Rik PE=1 SV=1; Uncharacterized protein KIAA1671 OS=Mus musculus OX=10090 GN=Kiaa1671 PE=2 SV=1 0 3 3 0.6486 0 1 1 1 384.22296 1150.65433 1150.65302 1.14 0.00044 0/0 0 0 11015549 HCD 30 MS2 15.7501 205.5 110 30.7194 6135 6135 6129 QEplus033719.raw F4 244.5 118.8 228.4 195.6 203.2 242.6 273 4.07 1 FALSE 1.14E-05 2.02E-06 1.18 -250 13308 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVDTNQDR [K].nVDTNQDR.[L] N-Term(TMT6plex) 5 Q02819 Nucleobindin-1 OS=Mus musculus OX=10090 GN=Nucb1 PE=1 SV=2 A0A1C7CYU3; Q02819; Q3TCI1; A0A1B0GR41; Q8BRD3 Nucleobindin-1 OS=Mus musculus OX=10090 GN=Nucb1 PE=1 SV=1; Nucleobindin-1 OS=Mus musculus OX=10090 GN=Nucb1 PE=1 SV=2; Nucleobindin-1 (Fragment) OS=Mus musculus OX=10090 GN=Nucb1 PE=2 SV=1; Nucleobindin-1 (Fragment) OS=Mus musculus OX=10090 GN=Nucb1 PE=1 SV=1; Nucleobindin-1 OS=Mus musculus OX=10090 GN=Nucb1 PE=2 SV=1 0 2 2 0.6364 0 1 1 1 595.80237 1190.59746 1190.59629 0.98 0.00058 0/0 0 0 8665162 HCD 30 MS2 13.07128 449.3 110 30.7219 6136 6136 6129 QEplus033719.raw F4 531.3 373 474.4 366.7 566.3 384.1 121 3.08 1 FALSE 1.14E-05 0.0001322 0.834 -250 13314 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRAEVSQPR [K].nRAEVSQPR.[L] N-Term(TMT6plex) 2 A0A1S6GWH5 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1 A0A1S6GWH5; Q02053 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1; Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus OX=10090 GN=Uba1 PE=1 SV=1 1 2 2 0.4177 0 1 1 1 643.36279 1285.71831 1285.71741 0.7 0.00045 0/0 0 0 8397881 HCD 30 MS2 41.46732 166.6 110 30.7244 6137 6137 6129 QEplus033719.raw F4 189.7 147.9 173.4 107.7 230.7 150.3 272 2.37 1 FALSE 0.001335 0.01852 0.294 -250 13328 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDGDSAVGSR [K].dDGDSAVGSR.[L] N-Term(TMT6plex) 5 G5E896 Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=1 A0A0R4J1Q0; Q3UJB9-2; G5E896; Q3UJB9; D6RE33 Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=1; Isoform 2 of Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4; Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=1; Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=2; Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=1 0 2 2 0.6228 0 1 1 1 604.29285 1207.57842 1207.57522 2.64 0.0016 0/0 0 0 6297108 HCD 30 MS2 54.41727 405 110 30.7294 6139 6139 6129 QEplus033719.raw F4 494.8 298.6 386.8 352.9 465.7 431.5 64 3.34 1 FALSE 1.14E-05 0.0001942 0.802 -250 13336 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGSGGVASSSESNR [K].tGSGGVASSSESNR.[D] N-Term(TMT6plex) 5 G3UVU2 Splicing factor 3A subunit 2 OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=1 Q7TN25; D3YW09; G3UVU2; D3Z5A6; Q62203 Sf3a2 protein OS=Mus musculus OX=10090 GN=Sf3a2 PE=2 SV=1; Splicing factor 3A subunit 2 OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=1; Splicing factor 3A subunit 2 OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=1; Splicing factor 3A subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=1; Splicing factor 3A subunit 2 OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=2 0 2 2 0.778 0 1 1 1 762.87756 1524.74785 1524.74514 1.78 0.00135 0/0 0 0 12383158 HCD 30 MS2 1.480328 249.6 110 30.7367 6141 6141 6140 QEplus033719.raw F4 276.1 244.7 263.2 176.2 313.6 224 132 4.82 1 FALSE 1.14E-05 1.23E-15 2.929 -250 13345 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNMNCEER [K].nNMNcEER.[S] N-Term(TMT6plex); C5(Carbamidomethyl) 5 J3KMQ6 RIKEN cDNA 5730455P16 gene OS=Mus musculus OX=10090 GN=5730455P16Rik PE=1 SV=1 J3KMQ6; Q9CYI0; Q3TUY5; B1AQG3; A0PJK9 RIKEN cDNA 5730455P16 gene OS=Mus musculus OX=10090 GN=5730455P16Rik PE=1 SV=1; Protein Njmu-R1 OS=Mus musculus OX=10090 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=5730455P16Rik PE=2 SV=1; RIKEN cDNA 5730455P16 gene (Fragment) OS=Mus musculus OX=10090 GN=5730455P16Rik PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=5730455P16Rik PE=2 SV=1 0 2 2 0.6584 0 1 1 1 648.28802 1295.56877 1295.56699 1.38 0.00089 0/0 0 0 5629349 HCD 30 MS2 11.94271 246.5 110 30.7393 6142 6142 6140 QEplus033719.raw F4 244.4 222.6 258.8 191.3 340.6 221.1 13 2.81 1 FALSE 3.35E-05 0.00129 0.639 -250 13350 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENQGDETQGQQPPQRR [K].eNQGDETQGQQPPQRR.[Y] N-Term(TMT6plex) 6 Q810K5 Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 A2BGG7; Q810K5; Q8BRJ5; P62960; Q71V06; Q60951 Y-box-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=1; Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Y-box-binding protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=3; Y box transcription factor (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1b OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 1 3 3 0.7973 0 1 1 1 699.68164 2097.03037 2097.02707 1.57 0.0011 0/0 0 0 17949054 HCD 30 MS2 0 252.5 110 30.7418 6143 6143 6140 QEplus033719.raw F4 288.8 195.4 258.4 139.2 372.5 260.8 196 5.92 1 FALSE 1.14E-05 6.31E-16 3.583 -250 13371 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRTPAAVR [R].nRTPAAVR.[E] N-Term(TMT6plex) 3 Q9EST5 Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Mus musculus OX=10090 GN=Anp32b PE=1 SV=1 Q9EST5; Q3UW32; Q9EST5-2 Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Mus musculus OX=10090 GN=Anp32b PE=1 SV=1; LRRcap domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Anp32b PE=2 SV=1; Isoform 2 of Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Mus musculus OX=10090 GN=Anp32b 1 2 2 0.37 0 1 1 1 557.33905 1113.67082 1113.66901 1.63 0.00091 0/0 0 0 11899606 HCD 30 MS2 16.95084 296.4 110 30.7488 6146 6146 6140 QEplus033719.raw F4 332.3 282.1 295.6 228.8 403.1 236.6 142 2.27 1 FALSE 0.003109 0.06063 0.112 -250 13375 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGSNQAIR [K].qGSNQAIR.[F] N-Term(TMT6plex) 2 Q8JZU2 "Tricarboxylate transport protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a1 PE=1 SV=1" F6VVY4; Q8JZU2 "Tricarboxylate transport protein, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Slc25a1 PE=1 SV=1; Tricarboxylate transport protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a1 PE=1 SV=1" 0 2 2 0.4667 0 1 1 1 551.81256 1102.61785 1102.61664 1.1 0.0006 0/0 0 0 11136859 HCD 30 MS2 14.27194 480.7 110 30.7513 6147 6147 6140 QEplus033719.raw F4 516.4 437.3 578.4 454.5 472.9 424.6 297 2.85 1 FALSE 1.14E-05 0.0001131 0.847 -250 13382 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HHCAAITPGR [K].hHcAAITPGR.[G] N-Term(TMT6plex); C3(Carbamidomethyl) 4 F8WHM5 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 F8WHM5; Q61543; F6RSH1; Q8BQH1 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=2 SV=1 0 3 3 0.7248 0 1 1 1 450.24213 1348.71183 1348.71055 0.94 0.00042 0/0 0 0 6705857.5 HCD 30 MS2 25.98556 193.4 110 30.7537 6148 6148 6140 QEplus033719.raw F4 216.3 151 219.1 166.2 212 196 254 5.45 1 FALSE 1.14E-05 4.31E-09 1.687 -250 13387 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GATDVDR [K].gATDVDR.[N] N-Term(TMT6plex) 4 A2AKI5 Integrin alpha-V OS=Mus musculus OX=10090 GN=Itgav PE=1 SV=1 A2AKI5; P43406; A0A0F7IQ06; Q3U4C8 Integrin alpha-V OS=Mus musculus OX=10090 GN=Itgav PE=1 SV=1; Integrin alpha-V OS=Mus musculus OX=10090 GN=Itgav PE=1 SV=2; Alpha v integrin OS=Mus musculus OX=10090 GN=Itgav PE=2 SV=1; Integrin_alpha2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Itgav PE=2 SV=1 0 2 2 0.2284 0 1 1 1 481.759 962.51073 962.51044 0.3 0.00014 0/0 0 0 6272537 HCD 30 MS2 19.56822 499.5 110 30.7562 6149 6149 6140 QEplus033719.raw F4 597.8 441.9 551.6 436.9 505.8 462.9 136 2.32 1 FALSE 0.0002419 0.004842 0.505 -250 13394 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GASGTVSSAR [R].gASGTVSSAR.[H] N-Term(TMT6plex) 2 P58801 Receptor-interacting serine/threonine-protein kinase 2 OS=Mus musculus OX=10090 GN=Ripk2 PE=1 SV=1 P58801; V9GXY4 Receptor-interacting serine/threonine-protein kinase 2 OS=Mus musculus OX=10090 GN=Ripk2 PE=1 SV=1; Receptor-interacting serine/threonine-protein kinase 2 OS=Mus musculus OX=10090 GN=Ripk2 PE=1 SV=1 0 2 2 0.5349 0 1 1 1 561.31091 1121.61455 1121.61122 2.97 0.00167 0/0 0 0 4945282.5 HCD 30 MS2 13.45972 251.8 110 30.7587 6150 6150 6140 QEplus033719.raw F4 253.9 229.3 237.9 149.5 483.3 157.2 227 3.01 1 FALSE 1.14E-05 4.43E-07 1.305 -250 13407 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAPSGPQR [R].sAPSGPQR.[A] N-Term(TMT6plex) 1 Q8VED2 Biogenesis of lysosome-related organelles complex 1 subunit 4 OS=Mus musculus OX=10090 GN=Bloc1s4 PE=1 SV=1 Q8VED2 Biogenesis of lysosome-related organelles complex 1 subunit 4 OS=Mus musculus OX=10090 GN=Bloc1s4 PE=1 SV=1 0 2 2 0.3238 0 1 1 1 514.78876 1028.57024 1028.56862 1.57 0.00081 0/0 0 0 2934435 HCD 30 MS2 58.92767 317 110 30.7686 6153 6153 6151 QEplus033719.raw F4 350.7 243.7 334.5 313.4 361 298.7 113 2.1 1 FALSE 0.004559 0.08086 0.059 -250 13414 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETDPGSPR [K].eTDPGSPR.[R] N-Term(TMT6plex) 3 Q8VDJ3 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1 Q8VDJ3; A0A087WP83; Q3V1M8 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1 0 2 2 0.3268 0 1 1 1 544.28406 1087.56084 1087.55812 2.5 0.00136 0/0 0 0 32130048 HCD 30 MS2 22.24917 474 35.746 30.7731 6155 6155 6151 QEplus033719.raw F4 527.3 388.2 474.3 392.1 645.5 416.7 113 2.05 1 FALSE 0.0002814 0.005714 0.485 -250 13420 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSPGPAGRPR [R].tSPGPAGRPR.[K] N-Term(TMT6plex) 2 J3QK52 Nucleolar complex protein 2 homolog OS=Mus musculus OX=10090 GN=Noc2l PE=1 SV=1 J3QK52; Q3UZI6 Nucleolar complex protein 2 homolog OS=Mus musculus OX=10090 GN=Noc2l PE=1 SV=1; Nucleolar complex protein 2 homolog (Fragment) OS=Mus musculus OX=10090 GN=Noc2l PE=2 SV=1 0 3 3 0.6445 0 1 1 1 408.90567 1224.70246 1224.70103 1.16 0.00047 0/0 0 0 16425464 HCD 30 MS2 16.71648 298.2 61.396 30.7753 6156 6156 6151 QEplus033719.raw F4 418.6 249.8 301.8 213.9 312.5 292.4 298 4.22 1 FALSE 1.14E-05 6.34E-08 1.465 -250 13437 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVPDHHPC [K].rVPDHHPc.[-] N-Term(TMT6plex); C8(Carbamidomethyl) 2 Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 Q9JJD8; Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=2 SV=1; CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 1 2 2 0.8517 0 1 1 1 623.81958 1246.63188 1246.63124 0.52 0.00032 0/0 0 0 4515152.5 HCD 30 MS2 0 83.1 110 30.7849 6160 6160 6151 QEplus033719.raw F4 90.8 52.9 95.1 68.7 108.1 83.1 150 2.63 1 FALSE 0.0002909 0.005903 0.481 -250 13449 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAASVR [KR].dAASVR.[AT] N-Term(TMT6plex) 7 P69566 Ran-binding protein 9 OS=Mus musculus OX=10090 GN=Ranbp9 PE=1 SV=1 A0A0R4J0G4; Q9D4H7; P69566-2; A0A1Y7VLX7; P69566; A9UGK3; E9Q5D6 Ran-binding protein 10 OS=Mus musculus OX=10090 GN=Ranbp10 PE=1 SV=1; LON peptidase N-terminal domain and RING finger protein 3 OS=Mus musculus OX=10090 GN=Lonrf3 PE=2 SV=1; Isoform 2 of Ran-binding protein 9 OS=Mus musculus OX=10090 GN=Ranbp9; Ran-binding protein 9 (Fragment) OS=Mus musculus OX=10090 GN=Ranbp9 PE=1 SV=1; Ran-binding protein 9 OS=Mus musculus OX=10090 GN=Ranbp9 PE=1 SV=1; Ran binding protein 10 OS=Mus musculus OX=10090 GN=Ranbp10 PE=2 SV=1; Ran-binding protein 9 OS=Mus musculus OX=10090 GN=Ranbp9 PE=1 SV=1 0 2 2 0.1857 0 1 1 1 424.24597 847.48467 847.4835 1.38 0.00058 0/0 0 0 3985923.25 HCD 30 MS2 30.06228 293.6 110 30.7947 6163 6163 6162 QEplus033719.raw F4 496.2 160.2 357.9 219.8 251.1 276.2 102 2.1 1 FALSE 0.001266 0.01725 0.307 -250 13458 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GETGDDGRDGVGSEGRR [R].gETGDDGRDGVGSEGRR.[G] N-Term(TMT6plex) 5 E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" A0A087WS16; Q05504; J3QQ16; O88493; E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen alpha 3 chain type VI (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Type VI collagen alpha 3 subunit OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" 2 4 4 0.6764 0 1 1 1 487.98767 1948.92885 1948.92702 0.94 0.00046 0/0 0 0 8093178 HCD 30 MS2 48.73382 195.8 110 30.7972 6164 6164 6162 QEplus033719.raw F4 239.5 177.9 203.9 167 217.9 168.4 92 4.45 1 FALSE 1.14E-05 5.69E-14 2.613 -250 13472 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGYRDGPR [R].dGYRDGPR.[R] N-Term(TMT6plex) 7 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 3 3 0.5261 0 1 1 1 388.87045 1164.59681 1164.5959 0.78 0.0003 0/0 0 0 23363100 HCD 30 MS2 36.04932 396 45.494 30.8017 6166 6166 6162 QEplus033719.raw F4 500.5 361.4 411.3 288.9 461.3 352.9 199 2.68 1 FALSE 0.001506 0.02191 0.266 -250 13498 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEEPEER [K].tEEPEER.[K] N-Term(TMT6plex) 1 Q640N1 Adipocyte enhancer-binding protein 1 OS=Mus musculus OX=10090 GN=Aebp1 PE=1 SV=1 Q640N1 Adipocyte enhancer-binding protein 1 OS=Mus musculus OX=10090 GN=Aebp1 PE=1 SV=1 0 2 2 0.4583 0 1 1 1 559.78021 1118.55315 1118.5527 0.4 0.00022 0/0 0 0 2932003 HCD 30 MS2 27.85317 198.2 110 30.8141 6171 6171 6162 QEplus033719.raw F4 186.4 150.7 240.1 188.2 253.3 170.6 75 2.64 1 FALSE 0.001185 0.01603 0.32 -250 13511 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HHCAAITPGR [K].hHcAAITPGR.[G] N-Term(TMT6plex); C3(Carbamidomethyl) 4 F8WHM5 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 F8WHM5; Q61543; F6RSH1; Q8BQH1 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=2 SV=1 0 2 2 0.779 0 1 1 1 674.85999 1348.71269 1348.71055 1.59 0.00107 0/0 0 0 2199018.25 HCD 30 MS2 0 74.5 110 30.824 6174 6174 6173 QEplus033719.raw F4 69.4 70.6 88.9 59.3 86.3 72.4 254 2.76 1 FALSE 1.14E-05 1.09E-06 1.23 -250 13540 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIAEDSDR [K].hIAEDSDR.[K] N-Term(TMT6plex) 7 P58774; A2AIM4; P58774-2 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 Q9D1R6; Q91VH3; P58774; A2AIM4; Q3SX28; P58774-2; Q61344 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1 0 3 3 0.588 0 1 1 1 391.20169 1171.59052 1171.59048 0.03 0.00001 0/0 0 0 8575896 HCD 30 MS2 31.57184 201.4 110 30.8362 6179 6179 6173 QEplus033719.raw F4 272.6 97.2 207.5 284.5 152.1 194.4 97 3.01 3 TRUE 1.14E-05 0.0001465 0.825 -250 13548 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RIGDDDR [R].rIGDDDR.[G] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.1179 0 1 1 1 359.19519 1075.57102 1075.56935 1.55 0.00056 0/0 0 0 6282594.5 HCD 30 MS2 73.80433 357.3 78.849 30.8384 6180 6180 6173 QEplus033719.raw F4 501.1 211.4 346.2 345.5 361.5 378.3 274 2.8 1 FALSE 0.002064 0.03759 0.183 -250 13573 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSSSGAGNVADR [R].gSSSGAGNVADR.[V] N-Term(TMT6plex) 4 A0A0A0MQ80 Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Spata5 PE=1 SV=1 A0A0A0MQ80; B7ZNK9; A0A0G2JFY0; Q3UMC0 Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Spata5 PE=1 SV=1; Spata5 protein OS=Mus musculus OX=10090 GN=Spata5 PE=2 SV=1; ATPase family protein 2 homolog OS=Mus musculus OX=10090 GN=Spata5 PE=1 SV=1; ATPase family protein 2 homolog OS=Mus musculus OX=10090 GN=Spata5 PE=1 SV=2 0 2 2 0.6629 0 1 1 1 653.83197 1306.65666 1306.65487 1.37 0.0009 0/0 0 0 2541859.75 HCD 30 MS2 0 119.2 110 30.846 6183 6183 6173 QEplus033719.raw F4 127.9 104.1 122.1 105 136.7 119.3 158 4.42 1 FALSE 1.14E-05 5.29E-13 2.429 -250 13586 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENQGDETQGQQPPQRR [K].eNQGDETQGQQPPQRR.[Y] N-Term(TMT6plex) 6 Q810K5 Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 A2BGG7; Q810K5; Q8BRJ5; P62960; Q71V06; Q60951 Y-box-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=1; Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Y-box-binding protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=3; Y box transcription factor (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1b OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 1 2 2 0.6623 0 1 1 1 1049.01868 2097.03008 2097.02707 1.43 0.0015 0/0 0 0 972651.4375 HCD 30 MS2 0 9.4 110 30.8558 6186 6186 6184 QEplus033719.raw F4 10.6 11.1 6.5 15.2 13 194 3.02 1 FALSE 1.14E-05 0.0009497 0.667 -250 13597 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIAEDSDR [K].hIAEDSDR.[K] N-Term(TMT6plex) 7 P58774; A2AIM4; P58774-2 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 Q9D1R6; Q91VH3; P58774; A2AIM4; Q3SX28; P58774-2; Q61344 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1 0 2 2 0.6588 0 1 1 1 586.30005 1171.59282 1171.59048 2 0.00117 0/0 0 0 8372067.5 HCD 30 MS2 6.653207 427.6 110 30.8606 6188 6188 6184 QEplus033719.raw F4 628.7 148.6 408.6 673.1 250.7 456.1 78 3.37 3 TRUE 1.14E-05 0.0001034 0.854 -250 13613 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SKEEEQQR [K].skEEEQQR.[L] N-Term(TMT6plex); K2(TMT6plex) 4 P13542 Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; G3UW82; I6L963; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 3 3 0.2822 0 1 1 1 497.94495 1491.82029 1491.81674 2.38 0.00118 0/0 0 0 2895044.75 HCD 30 MS2 40.20652 271.9 110 30.8656 6190 6190 6184 QEplus033719.raw F4 845.8 91.2 160.7 147.6 107 279.4 357 1.63 1 FALSE 0.002309 0.04587 0.155 -250 13619 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GETGDDGRDGVGSEGRR [R].gETGDDGRDGVGSEGRR.[G] N-Term(TMT6plex) 5 E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" A0A087WS16; Q05504; J3QQ16; O88493; E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen alpha 3 chain type VI (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Type VI collagen alpha 3 subunit OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" 2 3 3 0.6041 0 1 1 1 650.31445 1948.92881 1948.92702 0.91 0.00059 0/0 0 0 2659347.75 HCD 30 MS2 0 65.1 110 30.8681 6191 6191 6184 QEplus033719.raw F4 66.2 71.7 56.1 52.8 93.7 50.2 91 3.41 1 FALSE 1.14E-05 7.05E-08 1.456 -250 13626 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPQGGSDAPSGACR [R].rPQGGSDAPSGAcR.[-] N-Term(TMT6plex); C13(Carbamidomethyl) 2 Q9DCK4 Zinc finger protein 414 OS=Mus musculus OX=10090 GN=Znf414 PE=2 SV=1 Q9DCK4-2; Q9DCK4 Isoform 2 of Zinc finger protein 414 OS=Mus musculus OX=10090 GN=Znf414; Zinc finger protein 414 OS=Mus musculus OX=10090 GN=Znf414 PE=2 SV=1 0 3 3 0.4508 0 1 1 1 548.94159 1644.81021 1644.80737 1.73 0.00095 0/0 0 0 2632455.75 HCD 30 MS2 17.35887 98.9 110 30.8706 6192 6192 6184 QEplus033719.raw F4 112.8 92.9 90.1 80.8 132.1 84.8 136 3.86 1 FALSE 1.14E-05 7.61E-10 1.83 -250 13643 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous PTESGSCSTAR [-].pTESGScSTAR.[Q] N-Term(TMT6plex); C7(Carbamidomethyl) 1 H3BK66 WD repeat-containing protein 37 (Fragment) OS=Mus musculus OX=10090 GN=Wdr37 PE=1 SV=1 H3BK66 WD repeat-containing protein 37 (Fragment) OS=Mus musculus OX=10090 GN=Wdr37 PE=1 SV=1 0 2 2 0.796 0 1 1 1 691.33301 1381.65874 1381.65791 0.6 0.00042 0/0 0 0 1086859.125 HCD 30 MS2 0 70.1 110 30.8756 6194 6194 6184 QEplus033719.raw F4 81 49.5 85.1 60.4 69.8 74.7 67 2.5 1 FALSE 1.14E-05 6.67E-06 1.081 -250 13648 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YDDAERR [K].yDDAERR.[F] N-Term(TMT6plex) 14 Q91VK2; Q80T06 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1;Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1 Q8BW50; Q91VK2; P57776-2; D3Z7N2; F6ZFU0; Q80T06; A0A0R4J1E2; D3YY68; E9QN08; A0A0R4J1L2; D3YZT9; P57776-3; P57776; D3YUQ9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Eef1d PE=2 SV=1; Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 2 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 3 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=3; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=8 1 2 2 0.4835 0 1 1 1 577.29498 1153.58269 1153.57992 2.4 0.00139 0/0 0 0 1380037.5 HCD 30 MS2 32.24015 160.6 110 30.883 6196 6196 6195 QEplus033719.raw F4 160.7 108.9 177.1 152.8 216.4 147.5 132 2.42 2 FALSE 0.001567 0.02382 0.252 -250 13663 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETHQQVVSR [K].eTHQQVVSR.[I] N-Term(TMT6plex) 2 Q9R1A1 Sodium-hydrogen exchanger regulatory factor (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1 Q9R1A1; P70441 Sodium-hydrogen exchanger regulatory factor (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Mus musculus OX=10090 GN=Slc9a3r1 PE=1 SV=3 0 3 3 0.6172 0 1 1 1 438.24432 1312.71842 1312.71708 1.02 0.00045 0/0 0 0 14937779 HCD 30 MS2 47.9188 297.5 53.17 30.8875 6198 6198 6195 QEplus033719.raw F4 339.8 274.6 342.2 250.9 257.4 320.2 301 4.18 1 FALSE 1.14E-05 0.0001072 0.851 -250 13677 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YDDAERR [K].yDDAERR.[F] N-Term(TMT6plex) 14 Q91VK2; Q80T06 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1;Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1 Q8BW50; Q91VK2; P57776-2; D3Z7N2; F6ZFU0; Q80T06; A0A0R4J1E2; D3YY68; E9QN08; A0A0R4J1L2; D3YZT9; P57776-3; P57776; D3YUQ9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Eef1d PE=2 SV=1; Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 2 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 3 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=3; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=8 1 3 3 0.6199 0 1 1 1 385.19843 1153.58072 1153.57992 0.7 0.00027 0/0 0 0 9405943 HCD 30 MS2 5.860935 429.2 106.85 30.8924 6200 6200 6195 QEplus033719.raw F4 473.6 308.3 418.5 404.9 519.6 450.3 128 2.92 2 FALSE 1.14E-05 0.0006625 0.698 -250 13694 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YAAENNR [R].yAAENNR.[V] N-Term(TMT6plex) 3 P55264 Adenosine kinase OS=Mus musculus OX=10090 GN=Adk PE=1 SV=2 P55264; P55264-2; Q8BMC5 Adenosine kinase OS=Mus musculus OX=10090 GN=Adk PE=1 SV=2; Isoform Short of Adenosine kinase OS=Mus musculus OX=10090 GN=Adk; Adenosine kinase OS=Mus musculus OX=10090 GN=Adk PE=2 SV=1 0 2 2 0.448 0 1 1 1 533.7785 1066.54973 1066.54789 1.73 0.00092 0/0 0 0 4460301.5 HCD 30 MS2 27.18754 527 110 30.8996 6203 6203 6195 QEplus033719.raw F4 590.6 453.5 561.8 497.7 607.3 450.9 141 2.5 1 FALSE 0.0008268 0.01149 0.381 -250 13699 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQCTVTR [K].dQcTVTR.[T] N-Term(TMT6plex); C3(Carbamidomethyl) 4 A0A087WR85 Lysosomal cobalamin transport escort protein LMBD1 (Fragment) OS=Mus musculus OX=10090 GN=Lmbrd1 PE=4 SV=1 Q8K0B2-3; A0A087WR85; Q8K0B2-2; Q8K0B2 Isoform 3 of Lysosomal cobalamin transport escort protein LMBD1 OS=Mus musculus OX=10090 GN=Lmbrd1; Lysosomal cobalamin transport escort protein LMBD1 (Fragment) OS=Mus musculus OX=10090 GN=Lmbrd1 PE=4 SV=1; Isoform 2 of Lysosomal cobalamin transport escort protein LMBD1 OS=Mus musculus OX=10090 GN=Lmbrd1; Lysosomal cobalamin transport escort protein LMBD1 OS=Mus musculus OX=10090 GN=Lmbrd1 PE=1 SV=1 0 2 2 0.4797 0 1 1 1 554.78473 1108.56218 1108.56182 0.32 0.00018 0/0 0 0 2647201.75 HCD 30 MS2 9.45474 237.1 110 30.9021 6204 6204 6195 QEplus033719.raw F4 263.8 166.5 245.2 270.6 213 263.8 122 2.96 1 FALSE 0.0002518 0.00523 0.496 -250 13707 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HCEDVNECETRR [K].hcEDVNEcETRR.[C] N-Term(TMT6plex); C2(Carbamidomethyl); C8(Carbamidomethyl) 3 P37889 Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 P37889-2; Q99K58; P37889 Isoform 2 of Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2; Fibulin 2 OS=Mus musculus OX=10090 GN=Fbln2 PE=2 SV=1; Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 1 3 3 0.8615 0 1 1 1 611.94421 1833.81809 1833.81695 0.62 0.00038 0/0 0 0 1391824.625 HCD 30 MS2 6.824621 157.4 110 30.9046 6205 6205 6195 QEplus033719.raw F4 180.4 125.1 188 187.4 110.3 153.4 25 5.27 1 FALSE 1.14E-05 4.88E-15 2.816 -250 13714 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDRVPPSR [R].qDRVPPSR.[N] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 1 3 3 0.4854 0 1 1 1 395.23004 1183.67557 1183.67449 0.92 0.00036 0/0 0 0 50951444 HCD 30 MS2 13.72367 277.3 21.023 30.9119 6207 6207 6206 QEplus033719.raw F4 331.1 220.4 324 325.5 181.9 280.7 227 2.74 3 FALSE 1.14E-05 0.0003935 0.743 -250 13728 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQSAGVTR [K].aQSAGVTR.[S] N-Term(TMT6plex) 11 Q8CE80 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1 Q8CE04; P51125-7; A0A338P6J9; Q921U7; P51125-6; Q8CB83; Q8C281; Q8CE80; P51125; P51125-3; P51125-2 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 7 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 6 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=2 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpastatin OS=Mus musculus OX=10090 GN=Cast PE=1 SV=2; Isoform 3 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Isoform 2 of Calpastatin OS=Mus musculus OX=10090 GN=Cast 0 2 2 0.4618 0 1 1 1 509.79672 1018.58617 1018.58427 1.86 0.00095 0/0 0 0 20900706 HCD 30 MS2 31.8387 513.5 48.372 30.9187 6210 6210 6206 QEplus033719.raw F4 625.4 414.5 576.3 449.9 577.7 437.4 336 2.88 1 FALSE 0.0003496 0.006618 0.466 -250 13735 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSHDNTGAR [K].lSHDNTGAR.[Y] N-Term(TMT6plex) 3 Q8K411 "Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1 PE=1 SV=1" Q8K411-2; Q8K411-3; Q8K411 "Isoform 2 of Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1; Isoform 3 of Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1; Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1 PE=1 SV=1" 0 3 3 0.3828 0 1 1 1 400.54929 1199.6333 1199.63301 0.24 0.0001 0/0 0 0 11797911 HCD 30 MS2 15.50972 265.7 107.374 30.9212 6211 6211 6206 QEplus033719.raw F4 358.3 207.5 293.8 232 252.5 250.3 164 4.31 1 FALSE 1.14E-05 4.09E-07 1.311 -250 13759 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQTNNAASASASNST [R].gQTNNAASASASNST.[-] N-Term(TMT6plex) 2 E9QAQ5 Glycogen synthase kinase-3 beta OS=Mus musculus OX=10090 GN=Gsk3b PE=1 SV=1 E9QAQ5; Q9WV60 Glycogen synthase kinase-3 beta OS=Mus musculus OX=10090 GN=Gsk3b PE=1 SV=1; Glycogen synthase kinase-3 beta OS=Mus musculus OX=10090 GN=Gsk3b PE=1 SV=2 0 2 2 0.8312 0 1 1 1 805.38629 1609.76531 1609.76152 2.35 0.00189 0/0 0 0 3280239 HCD 30 MS2 4.818318 17.8 110 30.9282 6214 6214 6206 QEplus033719.raw F4 17.4 12.2 16 17 21.5 22.8 74 3.91 1 FALSE 1.14E-05 7.74E-09 1.638 -250 13779 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVPDHHPC [K].rVPDHHPc.[-] N-Term(TMT6plex); C8(Carbamidomethyl) 2 Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 Q9JJD8; Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=2 SV=1; CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 1 3 3 0.8333 0 1 1 1 416.21548 1246.6319 1246.63124 0.53 0.00022 0/0 0 0 104517736 HCD 30 MS2 6.565856 120.5 10.855 30.9405 6218 6218 6217 QEplus033719.raw F4 153.9 83.6 134.5 114.4 120.7 116 149 2.94 1 FALSE 0.0001504 0.003385 0.545 -250 13786 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YDDAERR [K].yDDAERR.[F] N-Term(TMT6plex) 14 Q91VK2; Q80T06 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1;Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1 Q8BW50; Q91VK2; P57776-2; D3Z7N2; F6ZFU0; Q80T06; A0A0R4J1E2; D3YY68; E9QN08; A0A0R4J1L2; D3YZT9; P57776-3; P57776; D3YUQ9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Eef1d PE=2 SV=1; Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 2 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 3 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=3; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=8 1 2 2 0.5301 0 1 1 1 577.29431 1153.58135 1153.57992 1.24 0.00072 0/0 0 0 6369076 HCD 30 MS2 4.53211 233.2 110 30.943 6219 6219 6217 QEplus033719.raw F4 247.1 154.2 228.7 244.6 301.8 222.8 132 2.66 2 FALSE 0.001125 0.01489 0.334 -250 13791 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HCEDVNECETRR [K].hcEDVNEcETRR.[C] N-Term(TMT6plex); C2(Carbamidomethyl); C8(Carbamidomethyl) 3 P37889 Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 P37889-2; Q99K58; P37889 Isoform 2 of Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2; Fibulin 2 OS=Mus musculus OX=10090 GN=Fbln2 PE=2 SV=1; Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 1 4 4 0.7689 0 1 1 1 459.21017 1833.81887 1833.81695 1.05 0.00048 0/0 0 0 40077104 HCD 30 MS2 7.543927 155.8 48.533 30.9453 6220 6220 6217 QEplus033719.raw F4 169 133.6 179.4 165.3 135.7 151.8 25 5.02 1 FALSE 1.14E-05 1.20E-07 1.412 -250 13797 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQEAIAQNR [K].rQEAIAQNR.[R] N-Term(TMT6plex) 1 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 1 3 3 0.5181 0 1 1 1 438.92004 1314.74558 1314.74396 1.23 0.00054 0/0 0 0 24317218 HCD 30 MS2 16.59224 255.9 46.71 30.9475 6221 6221 6217 QEplus033719.raw F4 284.4 211.2 296.6 201.9 303.2 237.8 358 4.96 1 FALSE 1.14E-05 6.02E-09 1.659 -250 13811 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HAFSGGR [K].hAFSGGR.[D] N-Term(TMT6plex) 4 Q4FJZ4 T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1 Q4FJZ4; Q3UDG2; Q3U6U7; P32921 "T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; Tryptophan--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Wars1 PE=1 SV=2" 0 2 2 0.6432 0 1 1 1 480.7641 960.52092 960.52128 -0.37 -0.00018 0/0 0 0 3374123.5 HCD 30 MS2 34.88736 328.7 110 30.955 6224 6224 6217 QEplus033719.raw F4 455.7 230.3 345.3 404.4 320 216.6 58 1.99 1 FALSE 0.0003408 0.006575 0.467 -250 13819 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQEAIAQNR [K].rQEAIAQNR.[R] N-Term(TMT6plex) 1 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 1 2 2 0.4601 0 1 1 1 657.87665 1314.74602 1314.74396 1.56 0.00103 0/0 0 0 3010761.25 HCD 30 MS2 10.5526 60.7 110 30.9575 6225 6225 6217 QEplus033719.raw F4 62 57 59.7 46.7 81.4 57.4 343 2.13 1 FALSE 1.14E-05 6.55E-05 0.892 -250 13826 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVNGESGESQR [K].eVNGESGESQR.[G] N-Term(TMT6plex) 3 Q496S6 Aven protein OS=Mus musculus OX=10090 GN=Aven PE=2 SV=1 Q496S6; Q496R6; Q9D9K3 Aven protein OS=Mus musculus OX=10090 GN=Aven PE=2 SV=1; Aven protein (Fragment) OS=Mus musculus OX=10090 GN=Aven PE=2 SV=1; Cell death regulator Aven OS=Mus musculus OX=10090 GN=Aven PE=1 SV=2 0 2 2 0.6472 0 1 1 1 710.84961 1420.69194 1420.68657 3.78 0.00269 0/0 0 0 2316838.5 HCD 30 MS2 36.9004 106.8 110 30.96 6226 6226 6217 QEplus033719.raw F4 102.3 101.1 100.5 107.5 119.1 110.1 94 3.43 1 FALSE 1.14E-05 1.25E-07 1.409 -250 13846 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THTLCR [K].tHTLcR.[R] N-Term(TMT6plex); C5(Carbamidomethyl) 1 Q9D823 60S ribosomal protein L37 OS=Mus musculus OX=10090 GN=Rpl37 PE=1 SV=3 Q9D823 60S ribosomal protein L37 OS=Mus musculus OX=10090 GN=Rpl37 PE=1 SV=3 0 2 2 0.3516 0 1 1 1 508.78015 1016.55303 1016.55087 2.13 0.00108 0/0 0 0 47765264 HCD 30 MS2 30.74879 565.4 20.655 30.9746 6231 6231 6228 QEplus033719.raw F4 721.2 384.9 606.7 586.5 575.1 517.9 222 2.19 1 FALSE 0.007474 0.1216 -0.045 -250 13855 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDDTADRDNPSTCR [K].nDDTADRDNPSTcR.[R] N-Term(TMT6plex); C13(Carbamidomethyl) 3 Q3TW96 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus OX=10090 GN=Uap1l1 PE=1 SV=1 Q3TW96; Q3TW96-2; Q8BVK3 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus OX=10090 GN=Uap1l1 PE=1 SV=1; Isoform 2 of UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus OX=10090 GN=Uap1l1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Uap1l1 PE=2 SV=1 1 3 3 0.799 0 1 1 1 622.61383 1865.82694 1865.82453 1.29 0.0008 0/0 0 0 11529584 HCD 30 MS2 7.303212 232.8 110 30.9771 6232 6232 6228 QEplus033719.raw F4 208.9 159.2 317.1 260.8 139.3 311.6 20 4.18 1 FALSE 1.14E-05 9.17E-12 2.194 -250 13862 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEIQNR [K].nEIQNR.[L] N-Term(TMT6plex) 15 A0A4Y5WWJ7 Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1 E9Q405; Q6PER1; Q9JMH9-6; A0A1C7ZN10; E9QAX2; Q9JMH9-5; Q9JMH9-4; Q9JMH9-1; B2RRE2; A0A4Y5WWJ7; Q9JMH9-2; K3W4L0; Q9JMH9-7; Q9JMH9; E9QA74 Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Myo18a protein (Fragment) OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1; Isoform 6 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 5 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Isoform 4 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Isoform 1 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Myo18a protein OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1; Isoform 2 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 7 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=2; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1 0 2 2 0.4428 0 1 1 1 501.78055 1002.55382 1002.55297 0.84 0.00042 0/0 0 0 6675085.5 HCD 30 MS2 17.29985 474.8 110 30.9819 6234 6234 6228 QEplus033719.raw F4 630.2 230.7 515.3 546 357.8 568.9 216 2.01 1 FALSE 0.001736 0.02942 0.219 -250 13871 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRGHREEGEDFSR [K].dRGHREEGEDFSR.[E] N-Term(TMT6plex) 3 Q9QZV4 Histidine-rich Ca2+ binding protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1 Q9QZV4; G5E8J6; B9EIW1 Histidine-rich Ca2+ binding protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1; Histidine-rich calcium-binding protein OS=Mus musculus OX=10090 GN=Hrc PE=1 SV=1; Hrc protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1 2 4 4 0.6717 0 1 1 1 455.47299 1818.87014 1818.86805 1.15 0.00052 0/0 0 0 4924674.5 HCD 30 MS2 9.736227 141.3 110 30.9844 6235 6235 6228 QEplus033719.raw F4 183.8 64.6 162.7 145.3 83.4 208 93 4.66 1 FALSE 1.14E-05 7.88E-09 1.637 -250 13880 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAEQTSVAS [K].rAEQTSVAS.[-] N-Term(TMT6plex) 3 Q9CY73 "39S ribosomal protein L44, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl44 PE=1 SV=3" Q9CY73; Q3UKG1; Q3U9C4 "39S ribosomal protein L44, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl44 PE=1 SV=3; DRBM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Mrpl44 PE=2 SV=1; DRBM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Mrpl44 PE=2 SV=1" 1 2 2 0.4785 0 1 1 1 589.32336 1177.63945 1177.63743 1.72 0.00101 0/0 0 0 3577045.5 HCD 30 MS2 10.66762 99.2 110 30.9894 6237 6237 6228 QEplus033719.raw F4 119.4 72.3 92.8 99.7 113.5 97.4 265 2.09 1 FALSE 0.004724 0.08305 0.053 -250 13906 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQEYEQR [K].sQEYEQR.[L] N-Term(TMT6plex) 1 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 0 2 2 0.3425 0 1 1 1 584.79419 1168.5811 1168.57958 1.3 0.00076 0/0 0 0 93481744 HCD 30 MS2 4.012758 434.6 16.432 31.004 6242 6242 6239 QEplus033719.raw F4 406.5 379.6 416.7 332 702.9 369.6 96 2.54 1 FALSE 0.001117 0.01474 0.336 -250 13915 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGPSGGMR [R].gGPSGGMR.[G] N-Term(TMT6plex) 2 Q571F9 MKIAA4115 protein (Fragment) OS=Mus musculus OX=10090 GN=G3bp1 PE=2 SV=1 Q571F9; P97855 MKIAA4115 protein (Fragment) OS=Mus musculus OX=10090 GN=G3bp1 PE=2 SV=1; Ras GTPase-activating protein-binding protein 1 OS=Mus musculus OX=10090 GN=G3bp1 PE=1 SV=1 0 2 2 0.5772 0 1 1 1 474.25049 947.4937 947.49302 0.72 0.00034 0/0 0 0 23886630 HCD 30 MS2 6.993525 673.7 57.4 31.0062 6243 6243 6239 QEplus033719.raw F4 885.9 470.2 701.1 509.1 878.6 597.1 136 2.72 1 FALSE 1.14E-05 0.0002124 0.794 -250 13927 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAECQR [K].vAEcQR.[K] N-Term(TMT6plex); C4(Carbamidomethyl) 2 Q61081 Hsp90 co-chaperone Cdc37 OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1 Q61081; A0A1L1STC0 Hsp90 co-chaperone Cdc37 OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1; Hsp90 co-chaperone Cdc37 (Fragment) OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1 0 2 2 0.6054 0 1 1 1 496.26379 991.52031 991.51923 1.09 0.00054 0/0 0 0 9380719 HCD 30 MS2 7.636624 479.8 110 31.0135 6246 6246 6239 QEplus033719.raw F4 827.2 338.8 574.7 323.6 351.8 462.7 175 2.23 1 FALSE 0.00257 0.05055 0.14 -250 13935 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTTSTLQR [K].rTTSTLQR.[E] N-Term(TMT6plex) 4 Z4YJF5 Myomesin-1 OS=Mus musculus OX=10090 GN=Myom1 PE=1 SV=1 A0A3B2W4I4; Z4YJF5; Q62234; Q62234-2 Myomesin-1 (Fragment) OS=Mus musculus OX=10090 GN=Myom1 PE=1 SV=1; Myomesin-1 OS=Mus musculus OX=10090 GN=Myom1 PE=1 SV=1; Myomesin-1 OS=Mus musculus OX=10090 GN=Myom1 PE=1 SV=2; Isoform 2 of Myomesin-1 OS=Mus musculus OX=10090 GN=Myom1 1 3 3 0.5206 0 1 1 1 397.90482 1191.69989 1191.7007 -0.68 -0.00027 0/0 0 0 7439384.5 HCD 30 MS2 14.50504 232.1 110 31.0159 6247 6247 6239 QEplus033719.raw F4 335 69.7 179.4 405.7 160 242.5 466 3.88 1 FALSE 0.001038 0.01361 0.351 -250 13943 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGANINR [K].sGANINR.[I] N-Term(TMT6plex) 4 Q8VDJ3 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1 Q8VDJ3; A0PJE9; A0A087WP83; Q3V1M8 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Hdlbp protein (Fragment) OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1; Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1 0 2 2 0.2895 0 1 1 1 480.77539 960.5435 960.54241 1.14 0.00055 0/0 0 0 3255588.5 HCD 30 MS2 36.99728 543.6 110 31.0209 6249 6249 6239 QEplus033719.raw F4 694.6 412.1 596.2 509.6 644.3 404.9 230 1.9 1 FALSE 0.0003496 0.006789 0.462 -250 13956 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REPDDEGEEDD [K].rEPDDEGEEDD.[-] N-Term(TMT6plex) 2 O35381 Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 D3Z7M9; O35381 Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 1 2 2 0.9585 0 1 1 1 767.82117 1534.63506 1534.63426 0.52 0.0004 0/0 0 0 3364275 HCD 30 MS2 0 46.5 110 31.0308 6252 6252 6250 QEplus033719.raw F4 46.3 49.1 44.7 32 62.8 44.4 4 2.41 1 FALSE 1.14E-05 0.0004687 0.728 -250 13965 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSASGYGTR [R].sSASGYGTR.[E] N-Term(TMT6plex) 2 Q8CH25 SAFB-like transcription modulator OS=Mus musculus OX=10090 GN=Sltm PE=1 SV=1 Q8CH25-2; Q8CH25 Isoform 2 of SAFB-like transcription modulator OS=Mus musculus OX=10090 GN=Sltm; SAFB-like transcription modulator OS=Mus musculus OX=10090 GN=Sltm PE=1 SV=1 0 2 2 0.5784 0 1 1 1 557.78851 1114.56975 1114.56902 0.66 0.00037 0/0 0 0 8297328 HCD 30 MS2 10.02895 321.4 110 31.0358 6254 6254 6250 QEplus033719.raw F4 313.8 310.6 344.3 273.7 418.9 267.4 93 2.68 1 FALSE 1.14E-05 3.47E-05 0.945 -250 13974 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNPYCR [R].rNPYcR.[N] N-Term(TMT6plex); C5(Carbamidomethyl) 3 A0A0R4J1Z3 Transmembrane protein 33 OS=Mus musculus OX=10090 GN=Tmem33 PE=1 SV=1 A0A0R4J1Z3; Q9CV90; Q9CR67 Transmembrane protein 33 OS=Mus musculus OX=10090 GN=Tmem33 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmem33 PE=2 SV=1; Transmembrane protein 33 OS=Mus musculus OX=10090 GN=Tmem33 PE=1 SV=1 1 3 3 0.5886 0 1 1 1 365.52936 1094.57352 1094.57266 0.78 0.00029 0/0 0 0 7256277.5 HCD 30 MS2 24.72667 237.4 110 31.0382 6255 6255 6250 QEplus033719.raw F4 233 133.8 227.2 374.1 231.7 224.4 220 2.99 1 FALSE 0.0001603 0.003506 0.542 -250 13981 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EREEDLRR [K].eREEDLRR.[L] N-Term(TMT6plex) 2 Q6NTA4 Ras-related GTP-binding protein B OS=Mus musculus OX=10090 GN=Rragb PE=1 SV=1 Q6NTA4; Q80X95 Ras-related GTP-binding protein B OS=Mus musculus OX=10090 GN=Rragb PE=1 SV=1; Ras-related GTP-binding protein A OS=Mus musculus OX=10090 GN=Rraga PE=1 SV=1 2 3 3 0.0569 0 1 1 1 444.57932 1331.72339 1331.72289 0.38 0.00017 0/0 0 0 6247514 HCD 30 MS2 53.67303 208.8 110 31.0407 6256 6256 6250 QEplus033719.raw F4 258.8 165.8 242.9 155.3 226.6 203.7 300 3.34 1 FALSE 1.14E-05 1.27E-05 1.028 -250 13989 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPDDPAR [K].sPDDPAR.[H] N-Term(TMT6plex) 2 P21550 Beta-enolase OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=3 Q4FK59; P21550 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno3 PE=2 SV=1; Beta-enolase OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=3 0 2 2 0.5251 0 1 1 1 493.75928 986.51128 986.51044 0.85 0.00042 0/0 0 0 4428014 HCD 30 MS2 41.88303 382.4 110 31.0432 6257 6257 6250 QEplus033719.raw F4 502.1 202.9 372 454.7 342.6 419.8 43 2.19 1 FALSE 0.001744 0.02969 0.218 -250 13995 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQTSTDSAPR [K].aQTSTDSAPR.[A] N-Term(TMT6plex) 2 Q3TPQ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Sugp1 PE=2 SV=1 Q3TPQ8; Q8CH02 Uncharacterized protein OS=Mus musculus OX=10090 GN=Sugp1 PE=2 SV=1; SURP and G-patch domain-containing protein 1 OS=Mus musculus OX=10090 GN=Sugp1 PE=1 SV=1 0 2 2 0.4444 0 1 1 1 631.83099 1262.65471 1262.65381 0.71 0.00045 0/0 0 0 4314201.5 HCD 30 MS2 6.567656 128.8 110 31.0458 6258 6258 6250 QEplus033719.raw F4 140.6 118.2 119.7 94.5 179.5 120.5 235 2.88 1 FALSE 1.14E-05 5.18E-06 1.102 -250 14033 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAQEDISR [K].rAQEDISR.[L] N-Term(TMT6plex) 5 Q5DTM8 E3 ubiquitin-protein ligase BRE1A OS=Mus musculus OX=10090 GN=Rnf20 PE=1 SV=2 A0A0X1KG60; Q5DTM8; Q5DTM8-2; A0A0U1RPJ4; Q3U319 E3 ubiquitin protein ligase OS=Mus musculus OX=10090 GN=Rnf40 PE=1 SV=1; E3 ubiquitin-protein ligase BRE1A OS=Mus musculus OX=10090 GN=Rnf20 PE=1 SV=2; Isoform 2 of E3 ubiquitin-protein ligase BRE1A OS=Mus musculus OX=10090 GN=Rnf20; E3 ubiquitin protein ligase OS=Mus musculus OX=10090 GN=Rnf40 PE=1 SV=1; E3 ubiquitin-protein ligase BRE1B OS=Mus musculus OX=10090 GN=Rnf40 PE=1 SV=2 1 3 3 0.4719 0 1 1 1 401.89322 1203.6651 1203.66431 0.66 0.00026 0/0 0 0 10237759 HCD 30 MS2 19.11185 290.7 97.02 31.0652 6265 6265 6261 QEplus033719.raw F4 410.6 243.7 314.8 193.3 306.4 275.6 294 3.92 1 FALSE 1.14E-05 0.000114 0.846 -250 14047 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDRVPPSR [R].qDRVPPSR.[N] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 1 2 2 0.4178 0 1 1 1 592.3407 1183.67412 1183.67449 -0.31 -0.00018 0/0 0 0 3926474 HCD 30 MS2 30.47378 132.3 110 31.0702 6267 6267 6261 QEplus033719.raw F4 123.7 87.3 115.5 112.2 200.5 154.8 248 2.25 3 FALSE 5.44E-05 0.002371 0.582 -250 14053 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVQQSSGPA [K].rVQQSSGPA.[-] N-Term(TMT6plex) 1 P62073 Mitochondrial import inner membrane translocase subunit Tim10 OS=Mus musculus OX=10090 GN=Timm10 PE=1 SV=1 P62073 Mitochondrial import inner membrane translocase subunit Tim10 OS=Mus musculus OX=10090 GN=Timm10 PE=1 SV=1 1 2 2 0.6853 0 1 1 1 579.82556 1158.64385 1158.64285 0.86 0.0005 0/0 0 0 3697384 HCD 30 MS2 16.83268 131.6 110 31.0727 6268 6268 6261 QEplus033719.raw F4 184.9 88.4 140.4 140.7 107.3 128 292 2.51 1 FALSE 0.0002019 0.004236 0.521 -250 14058 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRGHVQPIR [K].gRGHVQPIR.[C] N-Term(TMT6plex) 1 Q497N1 40S ribosomal protein S26 OS=Mus musculus OX=10090 GN=Rps26 PE=1 SV=1 Q497N1 40S ribosomal protein S26 OS=Mus musculus OX=10090 GN=Rps26 PE=1 SV=1 1 2 2 0.4975 0 1 1 1 624.87878 1248.75029 1248.74865 1.31 0.00082 0/0 0 0 2520872.25 HCD 30 MS2 24.99746 56.1 110 31.0753 6269 6269 6261 QEplus033719.raw F4 53.7 51.2 58.9 47.5 63.2 62 500 1.97 1 FALSE 0.00116 0.01547 0.327 -250 14062 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAQEDISR [K].rAQEDISR.[L] N-Term(TMT6plex) 5 Q5DTM8 E3 ubiquitin-protein ligase BRE1A OS=Mus musculus OX=10090 GN=Rnf20 PE=1 SV=2 A0A0X1KG60; Q5DTM8; Q5DTM8-2; A0A0U1RPJ4; Q3U319 E3 ubiquitin protein ligase OS=Mus musculus OX=10090 GN=Rnf40 PE=1 SV=1; E3 ubiquitin-protein ligase BRE1A OS=Mus musculus OX=10090 GN=Rnf20 PE=1 SV=2; Isoform 2 of E3 ubiquitin-protein ligase BRE1A OS=Mus musculus OX=10090 GN=Rnf20; E3 ubiquitin protein ligase OS=Mus musculus OX=10090 GN=Rnf40 PE=1 SV=1; E3 ubiquitin-protein ligase BRE1B OS=Mus musculus OX=10090 GN=Rnf40 PE=1 SV=2 1 2 2 0.3755 0 1 1 1 602.3363 1203.66533 1203.66431 0.84 0.00051 0/0 0 0 1754570.75 HCD 30 MS2 0 53.8 110 31.0778 6270 6270 6261 QEplus033719.raw F4 55.4 46.4 56.3 36.9 74.1 53.8 265 2.69 1 FALSE 7.59E-05 0.002816 0.565 -250 14076 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNYAER [K].gNYAER.[V] N-Term(TMT6plex) 6 Q149V4 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1 Q149V4; Q64522; Q8R1M2; A0A0N4SV66; Q64426; Q6GSS7 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1; Histone H2A type 2-B OS=Mus musculus OX=10090 GN=H2ac21 PE=1 SV=3; Histone H2A.J OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A (Fragment) OS=Mus musculus domesticus OX=10092 GN=H2A PE=2 SV=1; Histone H2A type 2-A OS=Mus musculus OX=10090 GN=Hist2h2aa1 PE=1 SV=3 0 2 2 0.1807 0 1 1 1 469.74887 938.49047 938.48931 1.23 0.00058 0/0 0 0 5820107 HCD 30 MS2 18.77548 402.9 110 31.0876 6273 6273 6272 QEplus033719.raw F4 470.2 326.1 424 280.9 590.2 326 47 2.38 1 FALSE 0.002483 0.04897 0.145 -250 14090 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGAGDSSGAR [R].vGAGDSSGAR.[K] N-Term(TMT6plex) 1 Q9D3B1 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Mus musculus OX=10090 GN=Hacd2 PE=1 SV=1 Q9D3B1 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 OS=Mus musculus OX=10090 GN=Hacd2 PE=1 SV=1 0 2 2 0.6262 0 1 1 1 553.29431 1105.58135 1105.57992 1.29 0.00072 0/0 0 0 18087660 HCD 30 MS2 6.138809 592 110 31.0926 6275 6275 6272 QEplus033719.raw F4 644.9 540.2 698.8 542.2 605.7 520.1 218 3.13 1 FALSE 1.14E-05 2.73E-08 1.534 -250 14097 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TADPSNPGR [K].tADPSNPGR.[H] N-Term(TMT6plex) 1 Q8K1N4 Spermatogenesis-associated serine-rich protein 2 OS=Mus musculus OX=10090 GN=Spats2 PE=1 SV=1 Q8K1N4 Spermatogenesis-associated serine-rich protein 2 OS=Mus musculus OX=10090 GN=Spats2 PE=1 SV=1 0 2 2 0.6902 0 1 1 1 572.302 1143.59673 1143.59557 1.02 0.00058 0/0 0 0 11121181 HCD 30 MS2 0 424.3 110 31.0951 6276 6276 6272 QEplus033719.raw F4 452.7 276.6 453.8 381.5 454.5 526.7 103 2.97 1 FALSE 1.14E-05 2.26E-06 1.17 -250 14100 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AREEGIR [R].aREEGIR.[L] N-Term(TMT6plex) 2 Q02788 Collagen alpha-2(VI) chain OS=Mus musculus OX=10090 GN=Col6a2 PE=1 SV=3 Q02788; D3Z7D5 Collagen alpha-2(VI) chain OS=Mus musculus OX=10090 GN=Col6a2 PE=1 SV=3; Collagen alpha-2(VI) chain OS=Mus musculus OX=10090 GN=Col6a2 PE=1 SV=1 1 2 2 0.3402 0 1 1 1 530.30914 1059.61101 1059.61082 0.18 0.00009 0/0 0 0 6249721 HCD 30 MS2 7.028668 160.7 110 31.0976 6277 6277 6272 QEplus033719.raw F4 195.9 117.3 158.7 141.4 207.8 143 328 2.41 1 FALSE 0.0005556 0.008413 0.432 -250 14108 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVAPSR [K].gVAPSR.[R] N-Term(TMT6plex) 9 Q8BN21; Q8CA60 Serine/threonine-protein kinase VRK2 OS=Mus musculus OX=10090 GN=Vrk2 PE=1 SV=2;Protein kinase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Vrk1 PE=2 SV=1 Q8BN21; Q8CA60; A0A1Y7VMH3; Q80X41-2; Q80X41-5; Q8BN21-2; Q3UWH3; Q3TL56; Q80X41 Serine/threonine-protein kinase VRK2 OS=Mus musculus OX=10090 GN=Vrk2 PE=1 SV=2; Protein kinase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Vrk1 PE=2 SV=1; Serine/threonine-protein kinase VRK1 OS=Mus musculus OX=10090 GN=Vrk1 PE=1 SV=1; Isoform 2 of Serine/threonine-protein kinase VRK1 OS=Mus musculus OX=10090 GN=Vrk1; Isoform 5 of Serine/threonine-protein kinase VRK1 OS=Mus musculus OX=10090 GN=Vrk1; Isoform 2 of Serine/threonine-protein kinase VRK2 OS=Mus musculus OX=10090 GN=Vrk2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vrk1 PE=2 SV=1; Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Vrk1 PE=2 SV=1; Serine/threonine-protein kinase VRK1 OS=Mus musculus OX=10090 GN=Vrk1 PE=1 SV=2 0 2 2 0.1977 0 1 1 1 408.25079 815.49431 815.49367 0.79 0.00032 0/0 0 0 4255984 HCD 30 MS2 11.68139 344.4 110 31.1001 6278 6278 6272 QEplus033719.raw F4 474.6 323.4 348.7 215.3 435.4 269.1 49 1.72 2 FALSE 0.009211 0.1691 -0.107 -250 14117 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CTCVGNGR [R].cTcVGNGR.[G] N-Term(TMT6plex); C1(Carbamidomethyl); C3(Carbamidomethyl) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.7264 0 1 1 1 576.77747 1152.54766 1152.54513 2.19 0.00126 0/0 0 0 4020584.5 HCD 30 MS2 19.15041 362.2 110 31.1026 6279 6279 6272 QEplus033719.raw F4 500.3 239 389.5 520.7 213.7 310.1 64 3.18 3 FALSE 1.14E-05 0.000153 0.822 -250 14124 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASTDGATATDR [K].aSTDGATATDR.[Y] N-Term(TMT6plex) 5 A0A1B0GRU3 Zinc finger CCCH domain-containing protein 4 OS=Mus musculus OX=10090 GN=Zc3h4 PE=1 SV=1 A0A1B0GRU3; Q6ZPZ3-2; E9Q8K8; Q6ZPZ3; Q6PAI8 Zinc finger CCCH domain-containing protein 4 OS=Mus musculus OX=10090 GN=Zc3h4 PE=1 SV=1; Isoform 2 of Zinc finger CCCH domain-containing protein 4 OS=Mus musculus OX=10090 GN=Zc3h4; Zinc finger CCCH domain-containing protein 4 OS=Mus musculus OX=10090 GN=Zc3h4 PE=1 SV=1; Zinc finger CCCH domain-containing protein 4 OS=Mus musculus OX=10090 GN=Zc3h4 PE=1 SV=2; Zc3h4 protein OS=Mus musculus OX=10090 GN=Zc3h4 PE=2 SV=2 0 2 2 0.7199 0 1 1 1 647.82611 1294.64495 1294.64364 1.01 0.00065 0/0 0 0 3934973.75 HCD 30 MS2 0 131.6 110 31.1051 6280 6280 6272 QEplus033719.raw F4 139 126.1 130.8 87.6 191 115.3 100 3.82 1 FALSE 1.14E-05 4.20E-09 1.689 -250 14131 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HCEDVNECETRR [K].hcEDVNEcETRR.[C] N-Term(TMT6plex); C2(Carbamidomethyl); C8(Carbamidomethyl) 3 P37889 Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 P37889-2; Q99K58; P37889 Isoform 2 of Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2; Fibulin 2 OS=Mus musculus OX=10090 GN=Fbln2 PE=2 SV=1; Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 1 2 2 0.8042 0 1 1 1 917.41486 1833.82244 1833.81695 2.99 0.00274 0/0 0 0 858800.1875 HCD 30 MS2 0 13.3 110 31.1077 6281 6281 6272 QEplus033719.raw F4 13.9 10.9 16.7 14.9 10.4 12.9 30 2.4 1 FALSE 0.0003211 0.006198 0.474 -250 14145 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TFHHGVR [R].tFHHGVR.[V] N-Term(TMT6plex) 1 Q9CWU9 Nucleoporin Nup37 OS=Mus musculus OX=10090 GN=Nup37 PE=1 SV=2 Q9CWU9 Nucleoporin Nup37 OS=Mus musculus OX=10090 GN=Nup37 PE=1 SV=2 0 3 3 0.245 0 1 1 1 361.53983 1082.60492 1082.60568 -0.7 -0.00025 0/0 0 0 8623922 HCD 30 MS2 58.27783 257.4 80.344 31.1175 6284 6284 6283 QEplus033719.raw F4 240.4 169 384.2 239.8 363.3 147.9 96 2.49 1 FALSE 0.001744 0.02961 0.218 -250 14189 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSEDMAR [R].sSEDMAR.[E] N-Term(TMT6plex) 3 Q99LD9 Translation initiation factor eIF-2B subunit beta OS=Mus musculus OX=10090 GN=Eif2b2 PE=1 SV=1 Q99LD9; D3Z487; D3Z7J6 Translation initiation factor eIF-2B subunit beta OS=Mus musculus OX=10090 GN=Eif2b2 PE=1 SV=1; Translation initiation factor eIF-2B subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Eif2b2 PE=1 SV=1; Translation initiation factor eIF-2B subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Eif2b2 PE=1 SV=1 0 2 2 0.509 0 1 1 1 512.75134 1024.49541 1024.49308 2.28 0.00117 0/0 0 0 5501261.5 HCD 30 MS2 30.39181 406.1 110 31.132 6290 6290 6283 QEplus033719.raw F4 494.2 294.5 469.1 372.6 424.1 382 60 2.22 1 FALSE 0.0003905 0.007014 0.458 -250 14204 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRGHREEGEDFSR [K].dRGHREEGEDFSR.[E] N-Term(TMT6plex) 3 Q9QZV4 Histidine-rich Ca2+ binding protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1 Q9QZV4; G5E8J6; B9EIW1 Histidine-rich Ca2+ binding protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1; Histidine-rich calcium-binding protein OS=Mus musculus OX=10090 GN=Hrc PE=1 SV=1; Hrc protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1 2 3 3 0.4349 0 1 1 1 606.96191 1818.87119 1818.86805 1.72 0.00105 0/0 0 0 1918665.875 HCD 30 MS2 0 43.7 110 31.137 6292 6292 6283 QEplus033719.raw F4 45.8 25.1 42.2 48.2 32.6 68.3 90 3.15 1 FALSE 1.14E-05 0.0003564 0.751 -250 14220 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAPEHSGPQDTSGGR [K].aAPEHSGPQDTSGGR.[A] N-Term(TMT6plex) 2 Q7TSG2 RNA polymerase II subunit A C-terminal domain phosphatase OS=Mus musculus OX=10090 GN=Ctdp1 PE=1 SV=1 Q7TSG2; Q3U0S4 RNA polymerase II subunit A C-terminal domain phosphatase OS=Mus musculus OX=10090 GN=Ctdp1 PE=1 SV=1; RNA polymerase II subunit A C-terminal domain phosphatase OS=Mus musculus OX=10090 GN=Ctdp1 PE=2 SV=1 0 3 3 0.8194 0 1 1 1 565.94751 1695.82798 1695.82479 1.88 0.00106 0/0 0 0 5700603.5 HCD 30 MS2 2.795153 94 110 31.1494 6296 6296 6294 QEplus033719.raw F4 103.3 85.4 93.9 75.2 128.1 78.1 98 6.09 1 FALSE 1.14E-05 6.31E-16 3.078 -250 14226 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLAAENR [K].hLAAENR.[L] N-Term(TMT6plex) 3 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 A2VCK0; Q8VDD5; A0A2R8VKI5 Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-9 (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=1 0 2 2 0.5467 0 1 1 1 520.29797 1039.58867 1039.58461 3.91 0.00203 0/0 0 0 50060260 HCD 30 MS2 3.823421 578.6 28.499 31.1516 6297 6297 6294 QEplus033719.raw F4 886.5 424.1 680.4 562.4 493.9 424.5 123 2.14 1 FALSE 0.001946 0.03367 0.199 -250 14235 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLRNDEHTR [K].dLRNDEHTR.[R] N-Term(TMT6plex) 3 Q9QUI0 Transforming protein RhoA OS=Mus musculus OX=10090 GN=Rhoa PE=1 SV=1 Q9QUI0; Q3TN61; A0A0A6YXF6 Transforming protein RhoA OS=Mus musculus OX=10090 GN=Rhoa PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rhoa PE=2 SV=1; Transforming protein RhoA (Fragment) OS=Mus musculus OX=10090 GN=Rhoa PE=1 SV=1 1 3 3 0.5413 0 1 1 1 462.2431 1384.71476 1384.71306 1.23 0.00057 0/0 0 0 10012212 HCD 30 MS2 14.71152 333.1 110 31.1541 6298 6298 6294 QEplus033719.raw F4 342.1 257 404.7 250.9 373.6 370 201 3.75 1 FALSE 1.14E-05 4.75E-05 0.919 -250 14241 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSGLSGR [R].qSGLSGR.[Q] N-Term(TMT6plex) 4 Q924Z4 Ceramide synthase 2 OS=Mus musculus OX=10090 GN=Cers2 PE=1 SV=1 Q924Z4; D3Z4M2; D3Z0Z2; D3YTM0 Ceramide synthase 2 OS=Mus musculus OX=10090 GN=Cers2 PE=1 SV=1; Ceramide synthase 2 (Fragment) OS=Mus musculus OX=10090 GN=Cers2 PE=1 SV=1; Ceramide synthase 2 (Fragment) OS=Mus musculus OX=10090 GN=Cers2 PE=1 SV=8; Ceramide synthase 2 (Fragment) OS=Mus musculus OX=10090 GN=Cers2 PE=1 SV=1 0 2 2 0.214 0 1 1 1 467.27124 933.5352 933.53151 3.96 0.00185 0/0 0 0 7333560 HCD 30 MS2 34.73402 557.9 110 31.1566 6299 6299 6294 QEplus033719.raw F4 756 476.8 646 450.8 565.8 452 153 2.43 1 FALSE 0.0009075 0.01253 0.366 -250 14250 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSTPSPER [K].sSTPSPER.[Q] N-Term(TMT6plex) 3 Q8BX70 Vacuolar protein sorting-associated protein 13C OS=Mus musculus OX=10090 GN=Vps13c PE=1 SV=2 Q8BX70-3; Q8BX70-2; Q8BX70 Isoform 3 of Vacuolar protein sorting-associated protein 13C OS=Mus musculus OX=10090 GN=Vps13c; Isoform 2 of Vacuolar protein sorting-associated protein 13C OS=Mus musculus OX=10090 GN=Vps13c; Vacuolar protein sorting-associated protein 13C OS=Mus musculus OX=10090 GN=Vps13c PE=1 SV=2 0 2 2 0.4027 0 1 1 1 545.2923 1089.57732 1089.57377 3.26 0.00177 0/0 0 0 6602097.5 HCD 30 MS2 13.55648 281.4 110 31.1591 6300 6300 6294 QEplus033719.raw F4 301.2 190.3 299 313.8 294.7 289.2 211 2.21 1 FALSE 0.003041 0.05928 0.116 -250 14254 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAQDQHRLER [K].dAQDQHRLER.[A] N-Term(TMT6plex) 3 E9QAT4 Protein transport protein Sec16A OS=Mus musculus OX=10090 GN=Sec16a PE=1 SV=1 E9QAT4; E9QAT4-2; F6T8X6 Protein transport protein Sec16A OS=Mus musculus OX=10090 GN=Sec16a PE=1 SV=1; Isoform 2 of Protein transport protein Sec16A OS=Mus musculus OX=10090 GN=Sec16a; Protein transport protein Sec16A (Fragment) OS=Mus musculus OX=10090 GN=Sec16a PE=1 SV=1 1 4 4 0.5209 0 1 1 1 374.94977 1496.77724 1496.77672 0.35 0.00013 0/0 0 0 6284817 HCD 30 MS2 10.04138 143.2 110 31.1616 6301 6301 6294 QEplus033719.raw F4 193.5 94.8 145.5 96.9 178.8 149.5 271 3.11 1 FALSE 1.14E-05 1.10E-05 1.04 -250 14276 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQPAPPR [K].rQPAPPR.[E] N-Term(TMT6plex) 2 Q9CQM8 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=1 Q4VA28; Q9CQM8 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=2 SV=1; 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=1 1 3 3 0.7052 0 1 1 1 350.88391 1050.63718 1050.63698 0.19 0.00007 0/0 0 0 3719614.25 HCD 30 MS2 38.59404 175 110 31.1691 6304 6304 6294 QEplus033719.raw F4 251.7 128.1 181.1 139.6 195.4 154.2 43 3.63 1 FALSE 0.0008268 0.01135 0.383 -250 14283 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGECAQTIR [K].hGEcAQTIR.[L] N-Term(TMT6plex); C4(Carbamidomethyl) 1 P27612 Phospholipase A-2-activating protein OS=Mus musculus OX=10090 GN=Plaa PE=1 SV=4 P27612 Phospholipase A-2-activating protein OS=Mus musculus OX=10090 GN=Plaa PE=1 SV=4 0 2 2 0.6755 0 1 1 1 650.83514 1300.66301 1300.66293 0.06 0.00004 0/0 0 0 2639908.25 HCD 30 MS2 0 115.5 110 31.1764 6306 6306 6305 QEplus033719.raw F4 126.8 87.7 115.2 115 133.3 115.2 127 2.65 1 FALSE 1.14E-05 2.11E-05 0.986 -250 14295 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTTAAEEAR [R].nTTAAEEAR.[Q] N-Term(TMT6plex) 2 Q8BKC5 Importin-5 OS=Mus musculus OX=10090 GN=Ipo5 PE=1 SV=3 Q3TT04; Q8BKC5 Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Ipo5 PE=2 SV=1; Importin-5 OS=Mus musculus OX=10090 GN=Ipo5 PE=1 SV=3 0 2 2 0.6527 0 1 1 1 596.31244 1191.6176 1191.6167 0.76 0.00045 0/0 0 0 15168326 HCD 30 MS2 4.081284 473.1 95.657 31.1812 6308 6308 6305 QEplus033719.raw F4 590.2 331 431.4 387.4 704.5 394.4 186 3.34 1 FALSE 1.14E-05 1.83E-06 1.187 -250 14302 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGHLCSCAR [K].gGHLcScAR.[N] N-Term(TMT6plex); C5(Carbamidomethyl); C7(Carbamidomethyl) 2 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 A0A0R4J0I9; Q91ZX7 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 0 3 3 0.7008 0 1 1 1 416.20392 1246.5972 1246.59823 -0.82 -0.00034 0/0 0 0 14677915 HCD 30 MS2 57.15141 366.3 47.015 31.1834 6309 6309 6305 QEplus033719.raw F4 691.6 205.3 329.8 332.2 387.5 251.2 51 2.54 1 FALSE 6.52E-05 0.00271 0.569 -250 14317 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QINQEAAHRR [R].qINQEAAHRR.[F] N-Term(TMT6plex) 15 Q641N8 HECT-type E3 ubiquitin transferase (Fragment) OS=Mus musculus OX=10090 GN=Nedd4l PE=2 SV=1 Q641N8; A0A494B9L5; Q8CFI0-2; A0A494B9F0; A0A494BAD8; Q3TQK9; G3X9H8; A0A494BAG2; Q80U03; Q8CFI0; A0A494BA39; A0A494BAX0; A0A494B953; Q8CFI0-3; E9PXB7 HECT-type E3 ubiquitin transferase (Fragment) OS=Mus musculus OX=10090 GN=Nedd4l PE=2 SV=1; E3 ubiquitin-protein ligase OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=1; Isoform 2 of E3 ubiquitin-protein ligase NEDD4-like OS=Mus musculus OX=10090 GN=Nedd4l; E3 ubiquitin-protein ligase OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=1; E3 ubiquitin-protein ligase NEDD4-like (Fragment) OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=1; HECT-type E3 ubiquitin transferase (Fragment) OS=Mus musculus OX=10090 GN=Nedd4l PE=2 SV=1; E3 ubiquitin-protein ligase OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=1; MKIAA0439 protein (Fragment) OS=Mus musculus OX=10090 GN=Nedd4l PE=2 SV=1; E3 ubiquitin-protein ligase NEDD4-like OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=2; E3 ubiquitin-protein ligase OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=1; Isoform 3 of E3 ubiquitin-protein ligase NEDD4-like OS=Mus musculus OX=10090 GN=Nedd4l; E3 ubiquitin-protein ligase OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=2 1 4 4 0.4454 0 1 1 1 363.70633 1451.80349 1451.80287 0.42 0.00015 0/0 0 0 3612644.5 HCD 30 MS2 33.14741 110.3 110 31.1882 6311 6311 6305 QEplus033719.raw F4 133 81.8 99.5 88.5 166.1 92.7 414 3.39 1 FALSE 1.14E-05 0.0005051 0.721 -250 14324 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGEAGVSNASR [R].sGEAGVSNASR.[V] N-Term(TMT6plex) 5 Q05CQ5 Phip protein (Fragment) OS=Mus musculus OX=10090 GN=Phip PE=2 SV=1 Q05CQ5; Q8VDD9; Q8BSJ8; Q05BL7; F8VQ93 Phip protein (Fragment) OS=Mus musculus OX=10090 GN=Phip PE=2 SV=1; PH-interacting protein OS=Mus musculus OX=10090 GN=Phip PE=1 SV=2; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Phip PE=2 SV=2; Phip protein (Fragment) OS=Mus musculus OX=10090 GN=Phip PE=2 SV=1; PH-interacting protein OS=Mus musculus OX=10090 GN=Phip PE=1 SV=1 0 2 2 0.5791 0 1 1 1 632.32806 1263.64885 1263.64906 -0.16 -0.0001 0/0 0 0 2686365.5 HCD 30 MS2 21.22018 112.4 110 31.1908 6312 6312 6305 QEplus033719.raw F4 121.2 110.7 111.6 71.7 164.8 94.5 215 3.16 1 FALSE 1.14E-05 1.52E-10 1.962 -250 14338 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSAATANASSASCSRR [R].sSAATANASSAScSRR.[L] N-Term(TMT6plex); C13(Carbamidomethyl) 1 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 1 3 3 0.7438 0 1 1 1 604.96637 1812.88456 1812.88199 1.42 0.00086 0/0 0 0 2050792.75 HCD 30 MS2 8.506989 75.7 110 31.1958 6314 6314 6305 QEplus033719.raw F4 76.9 57.9 83.4 62.6 112 61.1 127 4.45 1 FALSE 1.14E-05 6.31E-16 3.011 -250 14361 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLRNDEHTR [K].dLRNDEHTR.[R] N-Term(TMT6plex) 3 Q9QUI0 Transforming protein RhoA OS=Mus musculus OX=10090 GN=Rhoa PE=1 SV=1 Q9QUI0; Q3TN61; A0A0A6YXF6 Transforming protein RhoA OS=Mus musculus OX=10090 GN=Rhoa PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rhoa PE=2 SV=1; Transforming protein RhoA (Fragment) OS=Mus musculus OX=10090 GN=Rhoa PE=1 SV=1 1 2 2 0.4829 0 1 1 1 692.86072 1384.71416 1384.71306 0.8 0.00055 0/0 0 0 1952111 HCD 30 MS2 0 27.4 110 31.2081 6318 6318 6316 QEplus033719.raw F4 24.3 25.1 35.2 23.2 30.9 25.5 199 2.63 1 FALSE 0.0009824 0.01315 0.357 -250 14378 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEPVRSEEGR [K].qEPVRSEEGR.[D] N-Term(TMT6plex) 1 Q62159 Rho-related GTP-binding protein RhoC OS=Mus musculus OX=10090 GN=Rhoc PE=1 SV=2 Q62159 Rho-related GTP-binding protein RhoC OS=Mus musculus OX=10090 GN=Rhoc PE=1 SV=2 1 3 3 0.5875 0 1 1 1 472.58667 1415.74546 1415.74402 1.01 0.00048 0/0 0 0 15643439 HCD 30 MS2 12.57058 352.3 83.499 31.2127 6320 6320 6316 QEplus033719.raw F4 382.5 281.4 362.3 259.1 488.2 340 248 3.2 1 FALSE 1.14E-05 3.12E-05 0.954 -250 14385 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVQEAQR [K].aVQEAQR.[A] N-Term(TMT6plex) 2 Q04857 Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 Q99LW4; Q04857 Col6a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col6a1 PE=2 SV=1; Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 0 2 2 0.3741 0 1 1 1 515.79712 1030.58696 1030.58427 2.61 0.00134 0/0 0 0 15454237 HCD 30 MS2 6.22727 614 99.722 31.215 6321 6321 6316 QEplus033719.raw F4 865.9 539.9 666 531.7 585.3 495.2 298 2.7 1 FALSE 0.0002119 0.004462 0.515 -250 14393 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPARPQPERR [R].tPARPQPERR.[A] N-Term(TMT6plex) 1 Q80ZM5 "H1 histone family, member X OS=Mus musculus OX=10090 GN=H1f10 PE=1 SV=1" Q80ZM5 "H1 histone family, member X OS=Mus musculus OX=10090 GN=H1f10 PE=1 SV=1" 1 4 4 0.4667 0 1 1 1 359.96286 1436.82961 1436.82836 0.87 0.00031 0/0 0 0 15259066 HCD 30 MS2 34.81578 298.3 58.028 31.2173 6322 6322 6316 QEplus033719.raw F4 443.8 255.3 303.2 171.7 370.2 245.7 411 2.7 1 FALSE 1.14E-05 1.82E-05 0.998 -250 14401 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEAAASPR [R].aEAAASPR.[AT] N-Term(TMT6plex) 1 D3YZV8 Coiled-coil domain-containing protein 8 homolog OS=Mus musculus OX=10090 GN=Ccdc8 PE=1 SV=2 D3YZV8 Coiled-coil domain-containing protein 8 homolog OS=Mus musculus OX=10090 GN=Ccdc8 PE=1 SV=2 0 2 2 0.2788 0 1 1 1 501.2829 1001.55852 1001.55772 0.79 0.0004 0/0 0 0 5727255.5 HCD 30 MS2 18.15921 433.4 110 31.2197 6323 6323 6316 QEplus033719.raw F4 633.7 316.8 457.1 382.9 377.4 432.7 130 2.26 1 FALSE 0.004038 0.07482 0.075 -250 14412 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGHLCSCAR [K].gGHLcScAR.[N] N-Term(TMT6plex); C5(Carbamidomethyl); C7(Carbamidomethyl) 2 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 A0A0R4J0I9; Q91ZX7 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 0 2 2 0.6897 0 1 1 1 623.80145 1246.59563 1246.59823 -2.08 -0.0013 0/0 0 0 3144243 HCD 30 MS2 16.37001 185.5 110 31.2273 6326 6326 6316 QEplus033719.raw F4 190.5 167.5 189 179.8 279.3 107.2 44 2.61 1 FALSE 1.14E-05 0.0001773 0.809 -250 14431 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEVSSGSER [R].aEVSSGSER.[G] N-Term(TMT6plex) 4 Q9R0Y5 Adenylate kinase isoenzyme 1 OS=Mus musculus OX=10090 GN=Ak1 PE=1 SV=1 A0A0A6YXW8; Q9R0Y5-2; Q9R0Y5; Z4YN97 Nucleoside-diphosphate kinase (Fragment) OS=Mus musculus OX=10090 GN=Ak1 PE=1 SV=1; Isoform 2 of Adenylate kinase isoenzyme 1 OS=Mus musculus OX=10090 GN=Ak1; Adenylate kinase isoenzyme 1 OS=Mus musculus OX=10090 GN=Ak1 PE=1 SV=1; Nucleoside-diphosphate kinase (Fragment) OS=Mus musculus OX=10090 GN=Ak1 PE=1 SV=1 0 2 2 0.5891 0 1 1 1 575.79962 1150.59197 1150.59015 1.58 0.00091 0/0 0 0 138802080 HCD 30 MS2 4.334052 463.6 11.408 31.2394 6330 6330 6327 QEplus033719.raw F4 648.8 184.3 393.2 778.7 281.9 494.8 181 3.31 1 FALSE 1.14E-05 5.23E-06 1.101 -250 14437 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNEQIR [R].sNEQIR.[E] N-Term(TMT6plex) 6 B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 Q4FK88; Q3US43; Q4FJV4; Q3U5N9; A0A494BBD8; B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 0 2 2 0.1452 0 1 1 1 488.27554 975.54381 975.54207 1.78 0.00087 0/0 0 0 32888988 HCD 30 MS2 3.246689 639 44.554 31.2417 6331 6331 6327 QEplus033719.raw F4 743.2 764.4 784.1 403.8 728.3 410.5 211 2.41 1 FALSE 0.002853 0.05576 0.126 -250 14454 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQESVTGR [R].nQESVTGR.[S] N-Term(TMT6plex) 1 Q6DFV1 Condensin-2 complex subunit G2 OS=Mus musculus OX=10090 GN=Ncapg2 PE=1 SV=2 Q6DFV1 Condensin-2 complex subunit G2 OS=Mus musculus OX=10090 GN=Ncapg2 PE=1 SV=2 0 2 2 0.4356 0 1 1 1 560.30225 1119.59722 1119.59557 1.47 0.00082 0/0 0 0 3466908 HCD 30 MS2 24.38689 195.4 110 31.2464 6333 6333 6327 QEplus033719.raw F4 217.7 174.7 162.4 119.9 351.4 146.6 210 2.25 1 FALSE 1.14E-05 0.0007768 0.684 -250 14478 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEPEEQER [R].aEPEEQER.[G] N-Term(TMT6plex) 1 Q0KL01 UBX domain-containing protein 2B OS=Mus musculus OX=10090 GN=Ubxn2b PE=1 SV=2 Q0KL01 UBX domain-containing protein 2B OS=Mus musculus OX=10090 GN=Ubxn2b PE=1 SV=2 0 2 2 0.3185 0 1 1 1 608.80457 1216.60185 1216.60071 0.94 0.00057 0/0 0 0 1414655 HCD 30 MS2 18.8293 143.9 110 31.2539 6336 6336 6327 QEplus033719.raw F4 163.1 116.5 129.6 107.7 209.3 137.4 82 2.92 1 FALSE 5.44E-05 0.002136 0.592 -250 14497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSQGTSAEGSVR [R].nSQGTSAEGSVR.[K] N-Term(TMT6plex) 4 E9QP99 Golgin subfamily A member 3 OS=Mus musculus OX=10090 GN=Golga3 PE=1 SV=1 Q3UZV1; E9QP99; P55937; D3Z0Q8 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Golga3 PE=2 SV=1; Golgin subfamily A member 3 OS=Mus musculus OX=10090 GN=Golga3 PE=1 SV=1; Golgin subfamily A member 3 OS=Mus musculus OX=10090 GN=Golga3 PE=1 SV=3; Golgin subfamily A member 3 (Fragment) OS=Mus musculus OX=10090 GN=Golga3 PE=1 SV=1 0 2 2 0.6832 0 1 1 1 711.36322 1421.71916 1421.7182 0.68 0.00048 0/0 0 0 2333447.75 HCD 30 MS2 8.044525 43.5 110 31.2663 6340 6340 6338 QEplus033719.raw F4 49 33.1 38.9 43.7 43.1 52.9 185 4.04 1 FALSE 1.14E-05 1.96E-11 2.131 -250 14504 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDDYGR [K].tDDYGR.[D] N-Term(TMT6plex) 12 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; Q3TYI8; B2RXX6; Q6PA04; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5; Q58ES7 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1" 0 2 2 0.6025 0 1 1 1 478.23822 955.46916 955.46824 0.97 0.00046 0/0 0 0 21648622 HCD 30 MS2 8.520523 599.4 71.608 31.2685 6341 6341 6338 QEplus033719.raw F4 692 417.9 742.7 515.7 619.8 608 25 2.39 2 FALSE 0.004222 0.07739 0.068 -250 14514 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQEELDR [K].rQEELDR.[G] N-Term(TMT6plex) 4 Q9CW03 Structural maintenance of chromosomes protein 3 OS=Mus musculus OX=10090 GN=Smc3 PE=1 SV=2 Q6PIE1; Q6PFZ4; Q9CW03; Q6P5E5 Structural maintenance of chromosomes protein 1A (Fragment) OS=Mus musculus OX=10090 GN=Smc3 PE=2 SV=1; Smc3 protein OS=Mus musculus OX=10090 GN=Smc3 PE=2 SV=1; Structural maintenance of chromosomes protein 3 OS=Mus musculus OX=10090 GN=Smc3 PE=1 SV=2; Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc3 PE=2 SV=1 1 3 3 0.1886 0 1 1 1 392.21777 1174.63877 1174.63777 0.85 0.00033 0/0 0 0 12628510 HCD 30 MS2 22.69426 316.3 102.469 31.2731 6343 6343 6338 QEplus033719.raw F4 366.2 272.4 332 225.1 428.1 273.9 268 3.34 1 FALSE 1.14E-05 9.22E-05 0.864 -250 14537 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDSMSTTR [K].nDSMSTTR.[T] N-Term(TMT6plex) 3 Q6ZQ38 Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2 Q3UMI9; D3YWC5; Q6ZQ38 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cand1 PE=2 SV=1; Cullin-associated NEDD8-dissociated protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=1; Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2 0 2 2 0.7143 0 1 1 1 570.78046 1140.55364 1140.55165 1.74 0.00099 0/0 0 0 8733060 HCD 30 MS2 21.21029 475.1 110 31.2829 6347 6347 6338 QEplus033719.raw F4 535.3 358.3 487.6 389 654.5 425.7 54 2.8 1 FALSE 0.001456 0.02089 0.274 -250 14545 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGQHYPER [R].eGQHYPER.[H] N-Term(TMT6plex) 2 D3YXK2 Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=2 D3YXK2; S4R1M2 Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=2; Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=1 0 3 3 0.6214 0 1 1 1 415.54593 1244.62323 1244.62212 0.9 0.00037 0/0 0 0 23537034 HCD 30 MS2 55.18891 268.7 44.468 31.2972 6352 6352 6349 QEplus033719.raw F4 400.5 209.1 387.3 170.1 274.8 170.2 111 3.09 1 FALSE 0.0003905 0.006996 0.458 -250 14549 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGVACTQPR [K].rGVAcTQPR.[R] N-Term(TMT6plex); C5(Carbamidomethyl) 5 Q3UKJ6 RNA helicase OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1 A0A0G2JG10; Q497W9; Q3UKJ6; Q3TFE5; Q3UDX4 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1; DEAH (Asp-Glu-Ala-His) box polypeptide 15 OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Dhx15 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Dhx15 PE=2 SV=1 1 3 3 0.544 0 1 1 1 425.23846 1273.70084 1273.69965 0.93 0.0004 0/0 0 0 17450014 HCD 30 MS2 40.65052 406.7 74.01 31.2994 6353 6353 6349 QEplus033719.raw F4 543.1 212.2 502.1 337 500.9 344.9 320 4.43 1 FALSE 1.14E-05 1.63E-06 1.197 -250 14555 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQAEQEEQER [K].aQAEQEEQER.[L] N-Term(TMT6plex) 5 A2AJI0 MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1 A2AJI1; A2AJI0; A2AJI0-2; F6WF36; A8Y5P4 MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1; MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1; Isoform 2 of MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1; MAP7 domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1; MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1 0 2 2 0.4828 0 1 1 1 723.85553 1446.70378 1446.70222 1.08 0.00078 0/0 0 0 11826704 HCD 30 MS2 1.758937 245.3 110 31.302 6354 6354 6349 QEplus033719.raw F4 260.5 171 280.4 206.2 269.8 284.2 92 4.08 1 FALSE 1.14E-05 1.25E-08 1.599 -250 14559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSLQEER [R].rSLQEER.[R] N-Term(TMT6plex) 2 Q9D0I9 "Arginine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Rars1 PE=1 SV=2" Q3TVC5; Q9D0I9 "Arginine--tRNA ligase, cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Rars PE=2 SV=1; Arginine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Rars1 PE=1 SV=2" 1 3 3 0.211 0 1 1 1 382.88611 1146.64377 1146.64285 0.8 0.00031 0/0 0 0 11226844 HCD 30 MS2 20.00322 254.6 90.35 31.3042 6355 6355 6349 QEplus033719.raw F4 412.1 148.7 258.7 208.8 250.2 249 306 3.08 1 FALSE 5.44E-05 0.001743 0.611 -250 14566 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGEVER [R].aGEVER.[D] N-Term(TMT6plex) 31 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q499F9; Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q05CR3; Q9QXS1-9; E9Q9J6; Q9QXS1-5; E9PW24; A0A0R4J221; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; A0A0R4J223; Q8C8S5; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.1916 0 1 1 1 445.25085 889.49443 889.49406 0.42 0.00019 0/0 0 0 10500320 HCD 30 MS2 15.91703 629.4 110 31.3067 6356 6356 6349 QEplus033719.raw F4 1215.5 415.4 686.2 484.9 308.6 665.8 128 2.14 2 FALSE 0.002465 0.04871 0.146 -250 14583 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNHECASINR [R].gNHEcASINR.[I] N-Term(TMT6plex); C5(Carbamidomethyl) 8 P63087; P62137; P62141 Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1ca PE=1 SV=1;Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cb PE=1 SV=3 P63087; P63087-2; P62137; Q3TYF5; P62141; Q3U7K1; A0A0G2JGC1; A0A0G2JFF1 Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1; Isoform 2 of Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cc; Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1ca PE=1 SV=1; Serine/threonine-protein phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Ppp1ca PE=2 SV=1; Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cb PE=1 SV=3; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp1cc PE=2 SV=1; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1; Serine/threonine-protein phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1 0 2 2 0.7768 0 1 1 1 693.84155 1386.67583 1386.67456 0.91 0.00063 0/0 0 0 7317789 HCD 30 MS2 4.511319 230.3 110 31.3142 6359 6359 6349 QEplus033719.raw F4 235.9 214.6 249.3 191.4 295.1 195.5 94 3.36 3 FALSE 1.14E-05 9.63E-08 1.43 -250 14589 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTYQTEPDR [K].hTYQTEPDR.[T] N-Term(TMT6plex) 3 A0A1L1SRX2 AMP deaminase OS=Mus musculus OX=10090 GN=Ampd3 PE=1 SV=1 A0A1L1SRX2; O08739; Q922J7 AMP deaminase OS=Mus musculus OX=10090 GN=Ampd3 PE=1 SV=1; AMP deaminase 3 OS=Mus musculus OX=10090 GN=Ampd3 PE=1 SV=2; AMP deaminase (Fragment) OS=Mus musculus OX=10090 GN=Ampd3 PE=2 SV=1 0 3 3 0.582 0 1 1 1 459.23343 1375.68573 1375.68036 3.91 0.00179 0/0 0 0 3235560 HCD 30 MS2 69.52919 329 110 31.3215 6361 6361 6360 QEplus033719.raw F4 551.4 187.9 375.5 296.5 240.2 322.4 135 3.23 1 FALSE 7.59E-05 0.002779 0.566 -250 14592 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQDSVCR [K].aQDSVcR.[T] N-Term(TMT6plex); C6(Carbamidomethyl) 3 E9Q2X6 Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1 E9Q2X6; Q8CG47; Q6P7V9 Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1; Structural maintenance of chromosomes protein 4 OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1; Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=2 SV=1 0 2 2 0.5324 0 1 1 1 532.77246 1064.53765 1064.53561 1.91 0.00102 0/0 0 0 4849541.5 HCD 30 MS2 15.99798 281 110 31.324 6362 6362 6360 QEplus033719.raw F4 344.4 279 238.3 141.6 503.1 179.6 129 2.16 1 FALSE 0.0001603 0.003741 0.535 -250 14599 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNHECASINR [R].gNHEcASINR.[I] N-Term(TMT6plex); C5(Carbamidomethyl) 8 P63087; P62137; P62141 Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1ca PE=1 SV=1;Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cb PE=1 SV=3 P63087; P63087-2; P62137; Q3TYF5; P62141; Q3U7K1; A0A0G2JGC1; A0A0G2JFF1 Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1; Isoform 2 of Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cc; Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1ca PE=1 SV=1; Serine/threonine-protein phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Ppp1ca PE=2 SV=1; Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cb PE=1 SV=3; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp1cc PE=2 SV=1; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1; Serine/threonine-protein phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1 0 3 3 0.7918 0 1 1 1 462.89722 1386.6771 1386.67456 1.83 0.00085 0/0 0 0 145672448 HCD 30 MS2 24.41347 158.7 7.923 31.3263 6363 6363 6360 QEplus033719.raw F4 164.3 146.9 168 142.5 187.9 142.8 89 4.66 3 FALSE 1.14E-05 1.46E-07 1.396 -250 14602 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KHGGPADEER [K].kHGGPADEER.[H] N-Term(TMT6plex); K1(TMT6plex) 1 P08228 Superoxide dismutase [Cu-Zn] OS=Mus musculus OX=10090 GN=Sod1 PE=1 SV=2 P08228 Superoxide dismutase [Cu-Zn] OS=Mus musculus OX=10090 GN=Sod1 PE=1 SV=2 1 3 3 0.66 0 1 1 1 518.62012 1553.8458 1553.84362 1.4 0.00072 0/0 0 0 17638516 HCD 30 MS2 6.060517 687.3 110 31.3288 6364 6364 6360 QEplus033719.raw F4 1154.1 489.1 698.5 678.3 541.2 562.4 364 3.5 1 FALSE 1.14E-05 4.88E-09 1.676 -250 14610 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CTPSGERPER [R].cTPSGERPER.[R] N-Term(TMT6plex); C1(Carbamidomethyl) 5 A2AJI0 MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1 A2AJI1; A2AJI0; A2AJI0-2; F6WF36; A8Y5P4 MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1; MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1; Isoform 2 of MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1; MAP7 domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1; MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1 0 3 3 0.6094 0 1 1 1 473.24054 1417.70707 1417.70553 1.08 0.00051 0/0 0 0 16070046 HCD 30 MS2 29.64157 634 104.965 31.3312 6365 6365 6360 QEplus033719.raw F4 813.2 478.9 685.8 485 709 632.2 111 3.61 1 FALSE 1.14E-05 9.88E-05 0.858 -250 14615 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QNQALR [K].qNQALR.[L] N-Term(TMT6plex) 5 Q8C2S9 Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1 Q8C2S9; Q3U7S9; Q9EQK5; E9Q3X0; Q3THX5 Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=1 SV=4; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=1 SV=1; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1 0 2 2 0.3615 0 1 1 1 479.78571 958.56413 958.56314 1.03 0.0005 0/0 0 0 14231375 HCD 30 MS2 35.8304 712.7 110 31.3337 6366 6366 6360 QEplus033719.raw F4 963 469.2 787.9 785.2 527.8 743.1 128 2.13 1 FALSE 0.004296 0.07867 0.065 -250 14627 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQDGEINR [K].nQDGEINR.[N] N-Term(TMT6plex) 5 Q8BFU3 RING finger protein 214 OS=Mus musculus OX=10090 GN=Rnf214 PE=1 SV=1 Q8BFU3-5; Q8BFU3; Q8BFU3-3; Q8BFU3-2; Q8BFU3-4 Isoform 5 of RING finger protein 214 OS=Mus musculus OX=10090 GN=Rnf214; RING finger protein 214 OS=Mus musculus OX=10090 GN=Rnf214 PE=1 SV=1; Isoform 3 of RING finger protein 214 OS=Mus musculus OX=10090 GN=Rnf214; Isoform 2 of RING finger protein 214 OS=Mus musculus OX=10090 GN=Rnf214; Isoform 4 of RING finger protein 214 OS=Mus musculus OX=10090 GN=Rnf214 0 2 2 0.6729 0 1 1 1 587.80426 1174.60124 1174.60138 -0.12 -0.00007 0/0 0 0 5445179.5 HCD 30 MS2 36.92898 285.3 110 31.341 6369 6369 6360 QEplus033719.raw F4 314.6 227.7 292.8 225.8 353.8 297.1 116 2.66 1 FALSE 0.003682 0.07062 0.086 -250 14630 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSQGEEVAQR [K].nSQGEEVAQR.[S] N-Term(TMT6plex) 1 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 0 2 2 0.6742 0 1 1 1 673.85059 1346.6939 1346.68617 5.73 0.00386 0/0 0 0 5428023.5 HCD 30 MS2 22.0943 404.3 110 31.3435 6370 6370 6360 QEplus033719.raw F4 406.2 427.5 433 258.1 550.5 350.5 200 3.56 1 FALSE 1.14E-05 4.54E-08 1.492 -250 14636 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGVACTQPR [K].rGVAcTQPR.[R] N-Term(TMT6plex); C5(Carbamidomethyl) 5 Q3UKJ6 RNA helicase OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1 A0A0G2JG10; Q497W9; Q3UKJ6; Q3TFE5; Q3UDX4 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1; DEAH (Asp-Glu-Ala-His) box polypeptide 15 OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Dhx15 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Dhx15 PE=2 SV=1 1 2 2 0.2757 0 1 1 1 637.35413 1273.70098 1273.69965 1.04 0.00066 0/0 0 0 5856294 HCD 30 MS2 15.28714 84 110 31.3508 6372 6372 6371 QEplus033719.raw F4 91.6 74.1 82.6 58.7 119.1 77.8 320 2.14 1 FALSE 0.00459 0.08106 0.059 -250 14643 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQEDGQDSEDGPR [R].aQEDGQDSEDGPR.[G] N-Term(TMT6plex) 4 Q3UMU9 Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2 PE=1 SV=1 Q3UMU9-4; Q3UMU9-3; Q3UMU9-2; Q3UMU9 Isoform 4 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Isoform 3 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Isoform 2 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2 PE=1 SV=1 0 2 2 0.9224 0 1 1 1 816.8692 1632.73113 1632.72989 0.76 0.00062 0/0 0 0 5705374.5 HCD 30 MS2 0 105.4 110 31.3533 6373 6373 6371 QEplus033719.raw F4 101.5 97.1 124.9 78.6 114.6 115.5 25 4.51 1 FALSE 1.14E-05 8.34E-13 2.392 -250 14649 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDGAVAGTR [K].nDGAVAGTR.[Y] N-Term(TMT6plex) 9 Q922J3; Q9Z0H8 CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1;CAP-Gly domain-containing linker protein 2 OS=Mus musculus OX=10090 GN=Clip2 PE=1 SV=2 Q922J3-2; Q922J3; D3Z3M7; Q9Z0H8-2; Q8C0S5; Q9Z0H8; F6RCU2; F8WIA1; D3Z2Z1 Isoform 2 of CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1; CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; Isoform 2 of CAP-Gly domain-containing linker protein 2 OS=Mus musculus OX=10090 GN=Clip2; CAP-Gly domain-containing linker protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; CAP-Gly domain-containing linker protein 2 OS=Mus musculus OX=10090 GN=Clip2 PE=1 SV=2; CAP-Gly domain-containing linker protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1 0 2 2 0.5142 0 1 1 1 545.29651 1089.58574 1089.585 0.68 0.00037 0/0 0 0 11387670 HCD 30 MS2 31.35521 481.6 110 31.3581 6375 6375 6371 QEplus033719.raw F4 543 352.2 479.9 440.4 636.7 437.6 243 2.47 2 FALSE 1.14E-05 0.0007498 0.687 -250 14655 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGAVAADGR [K].gGAVAADGR.[I] N-Term(TMT6plex) 9 E9Q967; Q60838 Segment polarity protein dishevelled homolog DVL-3 OS=Mus musculus OX=10090 GN=Dvl3 PE=1 SV=1;Segment polarity protein dishevelled homolog DVL-2 OS=Mus musculus OX=10090 GN=Dvl2 PE=1 SV=2 E9Q967; P51141; Q60838; Q571M1; Q3V330; Q61062; E9Q150; I6L9H1; Q3TRW4 "Segment polarity protein dishevelled homolog DVL-3 OS=Mus musculus OX=10090 GN=Dvl3 PE=1 SV=1; Segment polarity protein dishevelled homolog DVL-1 OS=Mus musculus OX=10090 GN=Dvl1 PE=1 SV=2; Segment polarity protein dishevelled homolog DVL-2 OS=Mus musculus OX=10090 GN=Dvl2 PE=1 SV=2; MKIAA4029 protein (Fragment) OS=Mus musculus OX=10090 GN=Dvl1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dvl2 PE=2 SV=1; Segment polarity protein dishevelled homolog DVL-3 OS=Mus musculus OX=10090 GN=Dvl3 PE=1 SV=2; Segment polarity protein dishevelled homolog DVL-3 OS=Mus musculus OX=10090 GN=Dvl3 PE=1 SV=1; Dishevelled 2, dsh homolog (Drosophila) OS=Mus musculus OX=10090 GN=Dvl2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dvl1 PE=2 SV=1" 0 2 2 0.518 0 1 1 1 501.77948 1002.55168 1002.55297 -1.29 -0.00065 0/0 0 0 10379713 HCD 30 MS2 42.3156 518.3 75.206 31.3603 6376 6376 6371 QEplus033719.raw F4 781.3 326.5 550.9 495.4 451.2 504.7 243 3.05 2 FALSE 1.14E-05 7.88E-06 1.067 -250 14660 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GREQSLQCR [R].gREQSLQcR.[Y] N-Term(TMT6plex); C8(Carbamidomethyl) 4 Q545X5 Urokinase plasminogen activator surface receptor OS=Mus musculus OX=10090 GN=Plaur PE=2 SV=1 Q545X5; Q3U2D1; P35456-2; A0A0U1RNN0 Urokinase plasminogen activator surface receptor OS=Mus musculus OX=10090 GN=Plaur PE=2 SV=1; Urokinase plasminogen activator surface receptor OS=Mus musculus OX=10090 GN=Plaur PE=2 SV=1; Isoform 2 of Urokinase plasminogen activator surface receptor OS=Mus musculus OX=10090 GN=Plaur; Urokinase plasminogen activator surface receptor OS=Mus musculus OX=10090 GN=Plaur PE=1 SV=1 1 3 3 0.4873 0 1 1 1 454.90897 1362.71234 1362.71095 1.03 0.00047 0/0 0 0 7627482.5 HCD 30 MS2 16.60984 313.8 110 31.3628 6377 6377 6371 QEplus033719.raw F4 322.1 295.3 378.4 175.4 496.6 214.9 285 3.94 1 FALSE 1.14E-05 1.11E-06 1.229 -250 14673 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CESPEEGTR [R].cESPEEGTR.[C] N-Term(TMT6plex); C1(Carbamidomethyl) 3 Q6ZQ73 Cullin-associated NEDD8-dissociated protein 2 OS=Mus musculus OX=10090 GN=Cand2 PE=1 SV=2 Q6ZQ73; Q3TD19; Q3UM57 Cullin-associated NEDD8-dissociated protein 2 OS=Mus musculus OX=10090 GN=Cand2 PE=1 SV=2; TIP120 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Cand2 PE=2 SV=1; TIP120 domain-containing protein OS=Mus musculus OX=10090 GN=Cand2 PE=2 SV=1 0 2 2 0.736 0 1 1 1 647.30151 1293.59575 1293.59425 1.16 0.00075 0/0 0 0 3840736.25 HCD 30 MS2 18.84718 179.6 110 31.3678 6379 6379 6371 QEplus033719.raw F4 198.9 72.3 192.1 237.9 96.4 279.8 35 3.03 1 FALSE 1.14E-05 0.000732 0.689 -250 14678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTGDDSMR [R].vTGDDSmR.[M] N-Term(TMT6plex); M7(Oxidation) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9; F7AVL7 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.6105 0 1 1 1 563.27484 1125.54241 1125.54075 1.47 0.00083 0/0 0 0 3382664.75 HCD 30 MS2 7.266926 225.2 110 31.3703 6380 6380 6371 QEplus033719.raw F4 227.1 220.3 252.6 144.8 321.7 184.7 44 1.9 1 FALSE 0.001736 0.0291 0.221 -250 14684 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNQWHGR [R].sNQWHGR.[S] N-Term(TMT6plex) 1 Q9CQY2 RNA guanine-N7 methyltransferase activating subunit OS=Mus musculus OX=10090 GN=Ramac PE=3 SV=1 Q9CQY2 RNA guanine-N7 methyltransferase activating subunit OS=Mus musculus OX=10090 GN=Ramac PE=3 SV=1 0 3 3 0.4068 0 1 1 1 371.86618 1113.58399 1113.57511 7.98 0.00296 0/0 0 0 3084593 HCD 30 MS2 46.0321 140.3 110 31.3728 6381 6381 6371 QEplus033719.raw F4 172.5 98.1 147.7 142.3 157.1 123.8 123 2.36 1 FALSE 0.0009075 0.01262 0.364 -250 14694 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYPSGEER [R].rYPSGEER.[C] N-Term(TMT6plex) 4 Q3UY05 Complex I-23kD OS=Mus musculus OX=10090 GN=Ndufs8 PE=2 SV=1 Q3UY05; Q8K3J1; Q8VC72; A0A494BAW8 "Complex I-23kD OS=Mus musculus OX=10090 GN=Ndufs8 PE=2 SV=1; NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs8 PE=1 SV=1; Complex I-23kD OS=Mus musculus OX=10090 GN=Ndufs8 PE=2 SV=2; NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Ndufs8 PE=1 SV=1" 1 3 3 0.4585 0 1 1 1 408.21762 1222.63831 1222.63777 0.44 0.00018 0/0 0 0 8578374 HCD 30 MS2 12.78447 201.1 110 31.3801 6383 6383 6382 QEplus033719.raw F4 217.8 156.4 208.6 227.1 182.6 214.1 234 3.49 1 FALSE 5.44E-05 0.002396 0.581 -250 14702 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDEETVR [R].qDEETVR.[K] N-Term(TMT6plex) 1 Q6A028 Switch-associated protein 70 OS=Mus musculus OX=10090 GN=Swap70 PE=1 SV=2 Q6A028 Switch-associated protein 70 OS=Mus musculus OX=10090 GN=Swap70 PE=1 SV=2 0 2 2 0.4218 0 1 1 1 553.289 1105.57073 1105.56868 1.85 0.00102 0/0 0 0 3055574.5 HCD 30 MS2 0 199.7 110 31.3826 6384 6384 6382 QEplus033719.raw F4 191.9 240.6 243.6 156.4 200.5 165.4 176 2.75 1 FALSE 7.59E-05 0.002846 0.564 -250 14740 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQSSSMETR [R].tQSSSMETR.[L] N-Term(TMT6plex) 4 Q8BHL5 Engulfment and cell motility protein 2 OS=Mus musculus OX=10090 GN=Elmo2 PE=1 SV=1 Q8BHL5; Q8BHL5-2; Q8BHL5-3; Q5GMG0 Engulfment and cell motility protein 2 OS=Mus musculus OX=10090 GN=Elmo2 PE=1 SV=1; Isoform 2 of Engulfment and cell motility protein 2 OS=Mus musculus OX=10090 GN=Elmo2; Isoform 3 of Engulfment and cell motility protein 2 OS=Mus musculus OX=10090 GN=Elmo2; Engulfment and cell motility protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Elmo2 PE=1 SV=1 0 2 2 0.757 0 1 1 1 628.31177 1255.61626 1255.61498 1.02 0.00064 0/0 0 0 5508357 HCD 30 MS2 5.821384 210.2 110 31.3967 6390 6390 6382 QEplus033719.raw F4 222.1 187.8 205.5 155.6 317.9 172.4 83 3.21 1 FALSE 1.14E-05 2.82E-06 1.152 -250 14762 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDPVSTR [K].rDPVSTR.[V] N-Term(TMT6plex) 8 Q6PDI5 Proteasome adapter and scaffold protein ECM29 OS=Mus musculus OX=10090 GN=Ecpas PE=1 SV=3 A2ALV6; Q8C2Z1; Q6PDI5-2; A2ALW1; Q8C9Q5; A2ALV7; Q6PDI5; A2ALV8 Proteasome adapter and scaffold protein ECM29 OS=Mus musculus OX=10090 GN=Ecpas PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ecpas PE=2 SV=1; Isoform 2 of Proteasome adapter and scaffold protein ECM29 OS=Mus musculus OX=10090 GN=Ecpas; Proteasome adapter and scaffold protein ECM29 OS=Mus musculus OX=10090 GN=Ecpas PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ecpas PE=2 SV=1; Proteasome adapter and scaffold protein ECM29 (Fragment) OS=Mus musculus OX=10090 GN=Ecpas PE=1 SV=1; Proteasome adapter and scaffold protein ECM29 OS=Mus musculus OX=10090 GN=Ecpas PE=1 SV=3; Proteasome adapter and scaffold protein ECM29 (Fragment) OS=Mus musculus OX=10090 GN=Ecpas PE=1 SV=1 1 3 3 0.5187 0 1 1 1 353.87543 1059.61173 1059.61082 0.85 0.0003 0/0 0 0 16936804 HCD 30 MS2 13.85692 267.7 87.357 31.4113 6395 6395 6393 QEplus033719.raw F4 450 149.9 297.5 209.6 302.6 196.7 342 2.14 1 FALSE 1.14E-05 0.0007271 0.69 -250 14772 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HHTAAFEER [R].hHTAAFEER.[K] N-Term(TMT6plex) 31 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q499F9; Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q05CR3; Q9QXS1-9; E9Q9J6; Q9QXS1-5; E9PW24; A0A0R4J221; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; A0A0R4J223; Q8C8S5; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.5687 0 1 1 1 442.89737 1326.67755 1326.67521 1.76 0.00078 0/0 0 0 8454405 HCD 30 MS2 2.200138 180.7 110 31.4138 6396 6396 6393 QEplus033719.raw F4 246.8 162 186.6 191.7 163.1 134.1 160 3.71 2 FALSE 1.14E-05 8.07E-06 1.065 -250 14782 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVAAGNSCR [K].aVAAGNScR.[Q] N-Term(TMT6plex); C8(Carbamidomethyl) 16 A0A1L1SQ51; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1;Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q71LX4; Q68FD6; A0A1L1SRI1; Q80TM2; A0A1L1SQ51; B2RY15; Q9CS79; Q6PB69; Q8CHG4; Q8CDM9; A0A1L1SQP9; Q0V930; Q3UHS6; Q3TBC3; E9PUM4; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=3; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Tln2 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; MKIAA0320 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.6552 0 1 1 1 567.79907 1134.59087 1134.58871 1.9 0.00108 0/0 0 0 4625666.5 HCD 30 MS2 26.59096 374.4 110 31.4188 6398 6398 6393 QEplus033719.raw F4 531.6 279 382.2 364.8 349.7 339.2 173 2.9 2 FALSE 1.14E-05 1.74E-05 1.002 -250 14788 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSSGISR [R].tSSGISR.[E] N-Term(TMT6plex) 1 Q80VD1 Protein FAM98B OS=Mus musculus OX=10090 GN=Fam98b PE=1 SV=1 Q80VD1 Protein FAM98B OS=Mus musculus OX=10090 GN=Fam98b PE=1 SV=1 0 2 2 0.2308 0 1 1 1 468.77011 936.53295 936.53118 1.89 0.00089 0/0 0 0 4554095.5 HCD 30 MS2 34.6788 447 110 31.4212 6399 6399 6393 QEplus033719.raw F4 667 316.6 523 333.3 478.4 363.9 27 1.95 1 FALSE 0.003759 0.07134 0.084 -250 14820 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGTHNMYR [R].sGTHNMYR.[E] N-Term(TMT6plex) 7 P62717 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1 A0A1D5RME4; Q05CK2; Q3THJ0; A0A1D5RLW5; A0A1D5RM79; A0A1D5RM85; P62717 60S ribosomal protein L18a (Fragment) OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; Rpl18a protein OS=Mus musculus OX=10090 GN=Rpl18a PE=2 SV=1; 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=2 SV=1; 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a (Fragment) OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1 0 3 3 0.6041 0 1 1 1 398.8685 1194.59095 1194.58871 1.87 0.00075 0/0 0 0 1779159.5 HCD 30 MS2 0 157.8 110 31.4312 6403 6403 6393 QEplus033719.raw F4 167.8 137.3 109.3 184.5 248.5 99.4 111 3.41 1 FALSE 7.59E-05 0.00278 0.566 -250 14829 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDRVPPSR [R].qDRVPPSR.[N] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 1 3 3 0.4259 0 1 1 1 395.23013 1183.67585 1183.67449 1.15 0.00045 0/0 0 0 58324284 HCD 30 MS2 15.41496 233.6 20.41 31.4385 6405 6405 6404 QEplus033719.raw F4 263.8 169.2 264.9 289.5 184.1 229.9 230 2.7 3 FALSE 0.0002119 0.004307 0.519 -250 14835 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEGEHIR [K].eEGEHIR.[E] N-Term(TMT6plex) 4 Q8CEC0 Nuclear pore complex protein Nup88 OS=Mus musculus OX=10090 GN=Nup88 PE=1 SV=1 Q8CEC0-3; Q8CEC0; Q8CEC0-2; Q3TM09 Isoform 3 of Nuclear pore complex protein Nup88 OS=Mus musculus OX=10090 GN=Nup88; Nuclear pore complex protein Nup88 OS=Mus musculus OX=10090 GN=Nup88 PE=1 SV=1; Isoform 2 of Nuclear pore complex protein Nup88 OS=Mus musculus OX=10090 GN=Nup88; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nup88 PE=2 SV=1 0 2 2 0.4932 0 1 1 1 549.79144 1098.57561 1098.5741 1.37 0.00075 0/0 0 0 1315413.625 HCD 30 MS2 31.34244 121.4 110 31.441 6406 6406 6404 QEplus033719.raw F4 126.1 96.6 122.3 116.7 140.1 126.4 113 2.19 1 FALSE 0.0002909 0.005892 0.481 -250 14842 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNQITNNQR [K].nNQITNNQR.[I] N-Term(TMT6plex) 4 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 P09041; P09411; S4R2M7; B0LAA9 Phosphoglycerate kinase 2 OS=Mus musculus OX=10090 GN=Pgk2 PE=1 SV=4; Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4; Phosphoglycerate kinase OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=1; Phosphoglycerate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pgk1 PE=2 SV=1 0 2 2 0.645 0 1 1 1 665.85608 1330.70488 1330.70249 1.8 0.0012 0/0 0 0 36660488 HCD 30 MS2 2.053208 538.5 59.676 31.4433 6407 6407 6404 QEplus033719.raw F4 642.7 365.5 464.8 615 614.3 529 232 3.38 1 FALSE 1.14E-05 5.59E-05 0.905 -250 14857 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGSHADAAQER [R].vGSHADAAQER.[A] N-Term(TMT6plex) 1 Q91VJ2 Caveolae-associated protein 3 OS=Mus musculus OX=10090 GN=Cavin3 PE=1 SV=1 Q91VJ2 Caveolae-associated protein 3 OS=Mus musculus OX=10090 GN=Cavin3 PE=1 SV=1 0 3 3 0.6843 0 1 1 1 457.23883 1369.70194 1369.70216 -0.16 -0.00007 0/0 0 0 8917141 HCD 30 MS2 36.94655 326.9 110 31.4481 6409 6409 6404 QEplus033719.raw F4 352.1 328.3 331 230.9 449 270.3 150 4.15 1 FALSE 1.14E-05 6.86E-11 2.028 -250 14865 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDPGDAGPR [R].gDPGDAGPR.[G] N-Term(TMT6plex) 2 Q02788 Collagen alpha-2(VI) chain OS=Mus musculus OX=10090 GN=Col6a2 PE=1 SV=3 Q02788; D3Z7D5 Collagen alpha-2(VI) chain OS=Mus musculus OX=10090 GN=Col6a2 PE=1 SV=3; Collagen alpha-2(VI) chain OS=Mus musculus OX=10090 GN=Col6a2 PE=1 SV=1 0 2 2 0.5563 0 1 1 1 535.77606 1070.54485 1070.5428 1.91 0.00102 0/0 0 0 8031542 HCD 30 MS2 10.79374 422.4 110 31.4506 6410 6410 6404 QEplus033719.raw F4 385.9 459.3 451.4 229.7 604.2 403.8 97 2.93 1 FALSE 1.14E-05 1.46E-05 1.016 -250 14870 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVSAAR [R].eVSAAR.[E] N-Term(TMT6plex) 4 P62814 "V-type proton ATPase subunit B, brain isoform OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=1 SV=1" P62814; A0A1S6GWG6; Q91YH6; Q99KA3 "V-type proton ATPase subunit B, brain isoform OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=1 SV=1; Vacuolar proton pump subunit B OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=2 SV=1; V-type proton ATPase subunit B, kidney isoform OS=Mus musculus OX=10090 GN=Atp6v1b1 PE=1 SV=1; Vacuolar proton pump subunit B (Fragment) OS=Mus musculus OX=10090 GN=Atp6v1b1 PE=2 SV=1" 0 2 2 0.2424 0 1 1 1 431.25354 861.4998 861.49915 0.76 0.00033 0/0 0 0 5813831.5 HCD 30 MS2 62.9384 738.9 110 31.4531 6411 6411 6404 QEplus033719.raw F4 1127.3 460.1 1135.1 507.4 537.7 666 130 1.65 1 FALSE 0.004449 0.0798 0.062 -250 14878 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRLDGTER [R].sRLDGTER.[V] N-Term(TMT6plex) 3 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 Q3U454; A0A0R4J0I9; Q91ZX7 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lrp1 PE=2 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 1 2 2 0.3512 0 1 1 1 581.82385 1162.64043 1162.63777 2.29 0.00133 0/0 0 0 3390861.75 HCD 30 MS2 7.183585 112.1 110 31.4581 6413 6413 6404 QEplus033719.raw F4 119.5 104.1 120.1 96.9 125.3 106.6 280 2.05 1 FALSE 0.005214 0.08904 0.037 -250 14883 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CVTQSER [R].cVTQSER.[G] N-Term(TMT6plex); C1(Carbamidomethyl) 4 P35822 Receptor-type tyrosine-protein phosphatase kappa OS=Mus musculus OX=10090 GN=Ptprk PE=1 SV=1 P35822; Q8C462; B2RRF0; A0A1W2P7Y1 Receptor-type tyrosine-protein phosphatase kappa OS=Mus musculus OX=10090 GN=Ptprk PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Protein-tyrosine-phosphatase OS=Mus musculus OX=10090 GN=Ptprk PE=1 SV=1; Protein-tyrosine-phosphatase OS=Mus musculus OX=10090 GN=Ptprk PE=1 SV=1 0 2 2 0.1208 0 1 1 1 554.78595 1108.56462 1108.56182 2.52 0.0014 0/0 0 0 3369737.75 HCD 30 MS2 35.23045 231.5 110 31.4606 6414 6414 6404 QEplus033719.raw F4 277.1 171.8 232.3 219.9 230.3 257.8 134 2.4 1 FALSE 0.001506 0.0224 0.262 -250 14893 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYPSGEER [R].rYPSGEER.[C] N-Term(TMT6plex) 4 Q3UY05 Complex I-23kD OS=Mus musculus OX=10090 GN=Ndufs8 PE=2 SV=1 Q3UY05; Q8K3J1; Q8VC72; A0A494BAW8 "Complex I-23kD OS=Mus musculus OX=10090 GN=Ndufs8 PE=2 SV=1; NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs8 PE=1 SV=1; Complex I-23kD OS=Mus musculus OX=10090 GN=Ndufs8 PE=2 SV=2; NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Ndufs8 PE=1 SV=1" 1 2 2 0.1894 0 1 1 1 611.82361 1222.63994 1222.63777 1.78 0.00109 0/0 0 0 4977566 HCD 30 MS2 15.50018 92.6 110 31.4679 6416 6416 6415 QEplus033719.raw F4 94.7 74.8 101 96.9 89.3 98.8 233 2.27 1 FALSE 0.001429 0.0206 0.276 -250 14899 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CGESGHLAR [R].cGESGHLAR.[E] N-Term(TMT6plex); C1(Carbamidomethyl) 6 Q3ULK8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=1 Q3ULK8; P53996-2; Q3U5V2; Q9D548; A0A0N4SVS6; P53996 Uncharacterized protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=1; Isoform 2 of Cellular nucleic acid-binding protein OS=Mus musculus OX=10090 GN=Cnbp; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cnbp PE=2 SV=1; Cellular nucleic acid binding-like protein OS=Mus musculus OX=10090 GN=Zcchc13 PE=1 SV=1; Cellular nucleic acid-binding protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=1; Cellular nucleic acid-binding protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=2 0 2 2 0.5647 0 1 1 1 608.30981 1215.61235 1215.61017 1.79 0.00109 0/0 0 0 2493575 HCD 30 MS2 8.082223 133.1 110 31.4704 6417 6417 6415 QEplus033719.raw F4 179.1 99.5 106.3 118.3 228 67.6 89 2.32 1 FALSE 1.14E-05 1.05E-05 1.043 -250 14907 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CGESGHLAR [R].cGESGHLAR.[E] N-Term(TMT6plex); C1(Carbamidomethyl) 6 Q3ULK8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=1 Q3ULK8; P53996-2; Q3U5V2; Q9D548; A0A0N4SVS6; P53996 Uncharacterized protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=1; Isoform 2 of Cellular nucleic acid-binding protein OS=Mus musculus OX=10090 GN=Cnbp; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cnbp PE=2 SV=1; Cellular nucleic acid binding-like protein OS=Mus musculus OX=10090 GN=Zcchc13 PE=1 SV=1; Cellular nucleic acid-binding protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=1; Cellular nucleic acid-binding protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=2 0 3 3 0.6711 0 1 1 1 405.87527 1215.61127 1215.61017 0.9 0.00037 0/0 0 0 22080808 HCD 30 MS2 30.88931 212.2 48.792 31.4727 6418 6418 6415 QEplus033719.raw F4 288.1 168.3 179.4 190.1 337.4 110.1 85 4.47 1 FALSE 1.14E-05 6.03E-07 1.279 -250 14922 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TREEYEAR [R].tREEYEAR.[L] N-Term(TMT6plex) 1 Q9Z277 Tyrosine-protein kinase BAZ1B OS=Mus musculus OX=10090 GN=Baz1b PE=1 SV=2 Q9Z277 Tyrosine-protein kinase BAZ1B OS=Mus musculus OX=10090 GN=Baz1b PE=1 SV=2 1 3 3 0.4391 0 1 1 1 428.22397 1282.65735 1282.65889 -1.2 -0.00051 0/0 0 0 9466820 HCD 30 MS2 38.1025 373.7 86.975 31.4797 6421 6421 6415 QEplus033719.raw F4 445.9 327.4 425 272.2 433.8 338 165 3.12 1 FALSE 2.26E-05 0.0009747 0.664 -250 14940 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGSHADAAQER [R].vGSHADAAQER.[A] N-Term(TMT6plex) 1 Q91VJ2 Caveolae-associated protein 3 OS=Mus musculus OX=10090 GN=Cavin3 PE=1 SV=1 Q91VJ2 Caveolae-associated protein 3 OS=Mus musculus OX=10090 GN=Cavin3 PE=1 SV=1 0 2 2 0.6987 0 1 1 1 685.35565 1369.70403 1369.70216 1.37 0.00094 0/0 0 0 2902531.75 HCD 30 MS2 14.03788 115.6 110 31.4872 6424 6424 6415 QEplus033719.raw F4 111.1 148 107.3 83.8 165.3 78.1 166 3.02 1 FALSE 1.14E-05 5.76E-09 1.663 -250 14946 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSLGNSQR [K].qSLGNSQR.[E] N-Term(TMT6plex) 1 B6YY24 Skeletal muscle cells re-entry induced OS=Mus musculus OX=10090 GN=Fam91a1 PE=1 SV=1 B6YY24 Skeletal muscle cells re-entry induced OS=Mus musculus OX=10090 GN=Fam91a1 PE=1 SV=1 0 2 2 0.1615 0 1 1 1 559.80988 1118.61247 1118.61155 0.83 0.00046 0/0 0 0 2139586 HCD 30 MS2 52.58412 185.5 110 31.4897 6425 6425 6415 QEplus033719.raw F4 207.2 158.8 190.2 141.6 242.3 172.7 285 1.3 1 FALSE 0.002233 0.04327 0.163 -250 14958 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAEVNQNER [K].gAEVNQNER.[Y] N-Term(TMT6plex) 2 Q9QZK2 Breast cancer anti-estrogen resistance protein 3 homolog OS=Mus musculus OX=10090 GN=Bcar3 PE=1 SV=1 Q9QZK2-2; Q9QZK2 Isoform 2 of Breast cancer anti-estrogen resistance protein 3 homolog OS=Mus musculus OX=10090 GN=Bcar3; Breast cancer anti-estrogen resistance protein 3 homolog OS=Mus musculus OX=10090 GN=Bcar3 PE=1 SV=1 0 2 2 0.5364 0 1 1 1 623.32355 1245.63982 1245.63849 1.06 0.00066 0/0 0 0 1429345.5 HCD 30 MS2 11.94591 103.8 110 31.4996 6428 6428 6426 QEplus033719.raw F4 100.2 94.9 100.9 65.9 174.9 85.9 133 3.02 1 FALSE 1.14E-05 8.76E-07 1.248 -250 14973 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHQRPTLR [K].eHQRPTLR.[R] N-Term(TMT6plex) 4 O09161 Calsequestrin-2 OS=Mus musculus OX=10090 GN=Casq2 PE=1 SV=3 E9PZ67; O09161; B9EHC7; F6QYE1 Calsequestrin (Fragment) OS=Mus musculus OX=10090 GN=Casq2 PE=1 SV=1; Calsequestrin-2 OS=Mus musculus OX=10090 GN=Casq2 PE=1 SV=3; Calsequestrin OS=Mus musculus OX=10090 GN=Casq2 PE=2 SV=1; Calsequestrin OS=Mus musculus OX=10090 GN=Casq2 PE=1 SV=1 0 3 3 0.3472 0 1 1 1 422.58115 1265.72889 1265.72758 1.03 0.00043 0/0 0 0 20402188 HCD 30 MS2 7.267455 337.2 70.349 31.504 6430 6430 6426 QEplus033719.raw F4 392.4 68.9 327.6 590.1 79.1 565.1 419 2.65 1 FALSE 0.0001603 0.003578 0.539 -250 14982 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGPGDRDPPSRGEESR [R].aGPGDRDPPSRGEESR.[R] N-Term(TMT6plex) 3 Q3TA75 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Fxr2 PE=2 SV=1 Q9WVR4; Q6P5B5; Q3TA75 Fragile X mental retardation syndrome-related protein 2 OS=Mus musculus OX=10090 GN=Fxr2 PE=1 SV=1; Fragile X mental retardation syndrome-related protein 2 OS=Mus musculus OX=10090 GN=Fxr2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Fxr2 PE=2 SV=1 2 4 4 0.5965 0 1 1 1 478.74249 1911.94814 1911.94703 0.58 0.00028 0/0 0 0 17856414 HCD 30 MS2 15.61793 328.2 74.428 31.5063 6431 6431 6426 QEplus033719.raw F4 328.2 272.2 373.4 305.3 332.1 358 193 3.47 1 FALSE 1.14E-05 8.23E-06 1.063 -250 15013 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGSQGQCTQVR [R].tGSQGQcTQVR.[V] N-Term(TMT6plex); C7(Carbamidomethyl) 2 G3UYV7 40S ribosomal protein S28 (Fragment) OS=Mus musculus OX=10090 GN=Rps28 PE=1 SV=1 G3UYV7; P62858 40S ribosomal protein S28 (Fragment) OS=Mus musculus OX=10090 GN=Rps28 PE=1 SV=1; 40S ribosomal protein S28 OS=Mus musculus OX=10090 GN=Rps28 PE=1 SV=1 0 2 2 0.6702 0 1 1 1 725.86798 1450.72869 1450.72699 1.17 0.00085 0/0 0 0 9075427 HCD 30 MS2 2.538998 407.1 110 31.5158 6435 6435 6426 QEplus033719.raw F4 455.7 352.8 426.7 306.3 474.4 426.7 174 3.82 1 FALSE 1.14E-05 6.89E-10 1.838 -250 15027 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGPGDRDPPSRGEESR [R].aGPGDRDPPSRGEESR.[R] N-Term(TMT6plex) 3 Q3TA75 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Fxr2 PE=2 SV=1 Q9WVR4; Q6P5B5; Q3TA75 Fragile X mental retardation syndrome-related protein 2 OS=Mus musculus OX=10090 GN=Fxr2 PE=1 SV=1; Fragile X mental retardation syndrome-related protein 2 OS=Mus musculus OX=10090 GN=Fxr2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Fxr2 PE=2 SV=1 2 3 3 0.6418 0 1 1 1 637.98792 1911.94919 1911.94703 1.13 0.00072 0/0 0 0 5714534.5 HCD 30 MS2 16.64552 71.2 110 31.5256 6438 6438 6437 QEplus033719.raw F4 76.9 62.4 75.8 58.8 83.9 69.4 194 2.68 1 FALSE 1.14E-05 0.0001254 0.838 -250 15032 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QENESSYDR [K].qENESSYDR.[R] N-Term(TMT6plex) 3 Q8VDM6 Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus OX=10090 GN=Hnrnpul1 PE=1 SV=1 Q8VDM6; Q8VDM6-3; Q8VDM6-2 Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus OX=10090 GN=Hnrnpul1 PE=1 SV=1; Isoform 3 of Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus OX=10090 GN=Hnrnpul1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus OX=10090 GN=Hnrnpul1 0 2 2 0.6496 0 1 1 1 678.81519 1356.62309 1356.6229 0.14 0.0001 0/0 0 0 4418291.5 HCD 30 MS2 0 136.9 110 31.5281 6439 6439 6437 QEplus033719.raw F4 132.7 124.3 152.1 120 152 140.5 31 3.51 1 FALSE 1.14E-05 1.50E-06 1.204 -250 15037 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSQGEEVAQR [K].nSQGEEVAQR.[S] N-Term(TMT6plex) 1 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 0 2 2 0.6743 0 1 1 1 673.84698 1346.68669 1346.68617 0.39 0.00026 0/0 0 0 94998248 HCD 30 MS2 2.461742 369 24.641 31.5304 6440 6440 6437 QEplus033719.raw F4 359.5 408.8 387.8 240.4 507.3 310.2 172 3.5 1 FALSE 1.14E-05 1.18E-07 1.413 -250 15042 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRLDGTER [R].sRLDGTER.[V] N-Term(TMT6plex) 3 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 Q3U454; A0A0R4J0I9; Q91ZX7 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lrp1 PE=2 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 1 3 3 0.2429 0 1 1 1 388.21759 1162.63822 1162.63777 0.39 0.00015 0/0 0 0 52590172 HCD 30 MS2 30.04577 314.3 21.914 31.5327 6441 6441 6437 QEplus033719.raw F4 433.5 251.2 337.8 240.7 304.1 318.6 296 3.17 1 FALSE 0.001359 0.01932 0.287 -250 15048 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQAGMRPR [K].tQAGMRPR.[A] N-Term(TMT6plex) 6 Q60847 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3 Q60847; Q60847-3; E9PX70; Q60847-5; Q60847-4; Q60847-2 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3; Isoform 3 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1; Isoform 5 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 4 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 2 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 0 3 3 0.4448 0 1 1 1 382.55219 1145.642 1145.64108 0.81 0.00031 0/0 0 0 35656868 HCD 30 MS2 28.56281 478.4 33.213 31.5349 6442 6442 6437 QEplus033719.raw F4 543.3 294.1 485.2 234.2 1008.4 304.9 344 3.26 1 FALSE 1.14E-05 0.000534 0.717 -250 15053 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHNPAGNR [K].vHNPAGNR.[H] N-Term(TMT6plex) 2 Q3ULB1 Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1 Q3ULB1; Q921W7 Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=2 0 3 3 0.6389 0 1 1 1 365.20731 1093.60736 1093.60641 0.88 0.00032 0/0 0 0 16625613 HCD 30 MS2 31.42986 232.9 62.296 31.5371 6443 6443 6437 QEplus033719.raw F4 414 147.9 209.1 178.6 257.6 190.4 144 3.24 1 FALSE 0.00131 0.01788 0.301 -250 15063 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRDNMVR [K].dRDNMVR.[N] N-Term(TMT6plex) 7 Q6Q477 Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1 Q6Q477-2; Q6Q477; D1FNM9; D1FNM8; H2BL43; E9Q828; F7AAP4 Isoform 2 of Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4; Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=2 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=2 SV=2; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=2 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1 1 3 3 0.0226 2 2 2 378.86813 1134.58985 1134.58871 1.01 0.00038 0/0 0 0 13789988 HCD 30 MS2 24.49452 305.1 84.298 31.5394 6444 6444 6437 QEplus033719.raw F4 353.1 195 315 295.6 362.1 309.7 176 2.6 1 FALSE 0.003472 0.06729 0.095 -250 15068 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLREEQQR [K].qLREEQQR.[Q] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.4925 0 1 1 1 439.24808 1315.72968 1315.72798 1.29 0.00057 0/0 0 0 11109342 HCD 30 MS2 14.12576 552.3 110 31.5419 6445 6445 6437 QEplus033719.raw F4 688.1 381.6 537.5 534.5 671 501.4 334 2.66 2 FALSE 0.0001504 0.00329 0.548 -250 15078 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEASGCSR [R].vEASGcSR.[R] N-Term(TMT6plex); C6(Carbamidomethyl) 5 A0A1W2P6H1 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2 A0A1W2P6H1; H7BX05; A2AAJ9; E9QQ96; Z4YJE4 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Obscurin OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3 0 2 2 0.6 0 1 1 1 547.77881 1094.55034 1094.54617 3.81 0.00208 0/0 0 0 4654053.5 HCD 30 MS2 53.05338 418 110 31.5444 6446 6446 6437 QEplus033719.raw F4 545.6 239.9 387.2 501.7 386.5 447.1 115 2.65 1 FALSE 6.52E-05 0.002677 0.57 -250 15086 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETCQGMR [R].eTcQGMR.[H] N-Term(TMT6plex); C3(Carbamidomethyl) 1 Q8CFI7 DNA-directed RNA polymerase II subunit RPB2 OS=Mus musculus OX=10090 GN=Polr2b PE=1 SV=2 Q8CFI7 DNA-directed RNA polymerase II subunit RPB2 OS=Mus musculus OX=10090 GN=Polr2b PE=1 SV=2 0 2 2 0.6364 0 1 1 1 555.76599 1110.52471 1110.52333 1.24 0.00069 0/0 0 0 4446579 HCD 30 MS2 20.04791 335.6 110 31.5469 6447 6447 6437 QEplus033719.raw F4 360.1 294.4 361.4 274.7 448 274.7 47 2.97 1 FALSE 0.0001813 0.003982 0.528 -250 15100 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNQWHGR [R].sNQWHGR.[S] N-Term(TMT6plex) 1 Q9CQY2 RNA guanine-N7 methyltransferase activating subunit OS=Mus musculus OX=10090 GN=Ramac PE=3 SV=1 Q9CQY2 RNA guanine-N7 methyltransferase activating subunit OS=Mus musculus OX=10090 GN=Ramac PE=3 SV=1 0 3 3 0.3983 0 1 1 1 371.86523 1113.58115 1113.57511 5.43 0.00201 0/0 0 0 1322970.5 HCD 30 MS2 76.27132 131.8 110 31.5567 6450 6450 6448 QEplus033719.raw F4 172 94.8 126.4 125.9 154.5 117.2 102 2.41 1 FALSE 0.001152 0.01543 0.327 -250 15107 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGSQGQCTQVR [R].tGSQGQcTQVR.[V] N-Term(TMT6plex); C7(Carbamidomethyl) 2 G3UYV7 40S ribosomal protein S28 (Fragment) OS=Mus musculus OX=10090 GN=Rps28 PE=1 SV=1 G3UYV7; P62858 40S ribosomal protein S28 (Fragment) OS=Mus musculus OX=10090 GN=Rps28 PE=1 SV=1; 40S ribosomal protein S28 OS=Mus musculus OX=10090 GN=Rps28 PE=1 SV=1 0 3 3 0.7554 0 1 1 1 484.24738 1450.72757 1450.72699 0.4 0.00019 0/0 0 0 37104788 HCD 30 MS2 6.126774 181 45.172 31.5589 6451 6451 6448 QEplus033719.raw F4 226.5 125.4 174.3 173.1 190.2 196.2 160 5.07 1 FALSE 1.14E-05 4.10E-07 1.311 -250 15129 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGEQDHR [R].iGEQDHR.[V] N-Term(TMT6plex) 6 G5E8U9 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 OS=Mus musculus OX=10090 GN=Bnip2 PE=1 SV=1 G5E8U9; Q91VL0; Q9D632; Q3TTX3; Q3TWC8; O54940 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 OS=Mus musculus OX=10090 GN=Bnip2 PE=1 SV=1; BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 OS=Mus musculus OX=10090 GN=Bnip2 PE=1 SV=1; CRAL-TRIO domain-containing protein OS=Mus musculus OX=10090 GN=Bnip2 PE=2 SV=1; CRAL-TRIO domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Bnip2 PE=2 SV=1; CRAL-TRIO domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Bnip2 PE=2 SV=1; BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 OS=Mus musculus OX=10090 GN=Bnip2 PE=1 SV=2 0 3 3 0.3293 0 1 1 1 361.86322 1083.57511 1083.57444 0.62 0.00022 0/0 0 0 8286124.5 HCD 30 MS2 21.26247 220.3 110 31.5684 6455 6455 6448 QEplus033719.raw F4 331.1 125.2 233.5 197.1 226.4 208.2 124 3.28 1 FALSE 1.14E-05 0.0008629 0.675 -250 15134 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERIDTR [K].eRIDTR.[N] N-Term(TMT6plex) 8 P20029 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q3U9G2; Q3U6V3; Q3U7T8; Q3TI47 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1 1 2 2 0.105 0 1 1 1 509.7966 1018.58592 1018.58427 1.62 0.00083 0/0 0 0 5811719 HCD 30 MS2 29.06836 261.5 110 31.5709 6456 6456 6448 QEplus033719.raw F4 322.8 173.6 284.7 267.5 273.1 247 336 1.81 1 FALSE 0.001607 0.02521 0.243 -250 15142 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHSEDAIR [R].aHSEDAIR.[N] N-Term(TMT6plex) 2 P97930 Thymidylate kinase OS=Mus musculus OX=10090 GN=Dtymk PE=1 SV=2 P97930; D3Z3R3 Thymidylate kinase OS=Mus musculus OX=10090 GN=Dtymk PE=1 SV=2; dTMP kinase OS=Mus musculus OX=10090 GN=Dtymk PE=1 SV=1 0 3 3 0.6565 0 1 1 1 376.53809 1127.5997 1127.60065 -0.84 -0.00032 0/0 0 0 5538273 HCD 30 MS2 54.82627 292.8 110 31.5734 6457 6457 6448 QEplus033719.raw F4 331.1 232.2 331.1 226.1 357.8 278.5 143 3.61 1 FALSE 1.14E-05 4.71E-06 1.109 -250 15151 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHQRPTLR [K].eHQRPTLR.[R] N-Term(TMT6plex) 4 O09161 Calsequestrin-2 OS=Mus musculus OX=10090 GN=Casq2 PE=1 SV=3 E9PZ67; O09161; B9EHC7; F6QYE1 Calsequestrin (Fragment) OS=Mus musculus OX=10090 GN=Casq2 PE=1 SV=1; Calsequestrin-2 OS=Mus musculus OX=10090 GN=Casq2 PE=1 SV=3; Calsequestrin OS=Mus musculus OX=10090 GN=Casq2 PE=2 SV=1; Calsequestrin OS=Mus musculus OX=10090 GN=Casq2 PE=1 SV=1 0 2 2 0.262 0 1 1 1 633.3678 1265.72832 1265.72758 0.58 0.00037 0/0 0 0 4097133 HCD 30 MS2 4.898587 92.3 110 31.5759 6458 6458 6448 QEplus033719.raw F4 102.7 36 85.9 155.6 36.9 136.8 432 1.87 1 FALSE 0.009405 0.1768 -0.114 -250 15155 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDRVPPSR [R].qDRVPPSR.[N] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 1 2 2 0.4135 0 1 1 1 592.34161 1183.67595 1183.67449 1.24 0.00073 0/0 0 0 5085842.5 HCD 30 MS2 0 100.2 110 31.5833 6460 6460 6459 QEplus033719.raw F4 105.2 82.2 111.1 108 85.5 109.4 230 2.08 3 FALSE 0.001506 0.0224 0.262 -250 15165 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQTSHANLR [R].aQTSHANLR.[A] N-Term(TMT6plex) 4 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0; Q8C7E8 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 0 3 3 0.5355 0 1 1 1 409.56534 1226.68146 1226.6803 0.95 0.00039 0/0 0 0 70630840 HCD 30 MS2 6.217219 167.7 17.18 31.588 6462 6462 6459 QEplus033719.raw F4 178.5 138.8 167.7 148.9 241.3 131.1 218 4.65 1 FALSE 1.14E-05 9.51E-08 1.431 -250 15172 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQTIEER [R].rQTIEER.[K] N-Term(TMT6plex) 6 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3UEK3; Q6A0B9; Q3TKF9; Q3UL99; Q3UM46 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; MKIAA0139 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.5205 0 1 1 1 387.5582 1160.66004 1160.6585 1.32 0.00051 0/0 0 0 55909372 HCD 30 MS2 50.30223 278.5 20.544 31.5903 6463 6463 6459 QEplus033719.raw F4 442.1 198.8 274.2 219.4 274.6 262.1 355 3.17 1 FALSE 1.14E-05 0.0001407 0.829 -250 15175 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDQGPVGR [R].gDQGPVGR.[T] N-Term(TMT6plex) 5 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q91VL4; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Col1a2 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.3825 0 1 1 1 507.78101 1014.55474 1014.55297 1.74 0.00088 0/0 0 0 18479686 HCD 30 MS2 29.08675 667.8 64.405 31.5925 6464 6464 6459 QEplus033719.raw F4 740.5 549 662 626.4 846.4 582.2 103 2.51 1 FALSE 5.44E-05 0.002124 0.593 -250 15180 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAPGPGGHTG [K].tAPGPGGHTG.[-] N-Term(TMT6plex) 3 Q8C9L6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1 O54931-3; Q8C9L6; Q99L95 Isoform 3 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1; Akap2 protein OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1 0 2 2 0.7148 0 1 1 1 540.78577 1080.56426 1080.56354 0.66 0.00036 0/0 0 0 18358196 HCD 30 MS2 35.54025 347.4 59.307 31.5948 6465 6465 6459 QEplus033719.raw F4 369.6 258.5 345.8 316.1 529.2 265.4 172 2.56 1 FALSE 1.14E-05 7.85E-05 0.877 -250 15189 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSEEVVR [K].rSEEVVR.[L] N-Term(TMT6plex) 2 Q9DBG9 Tax1-binding protein 3 OS=Mus musculus OX=10090 GN=Tax1bp3 PE=1 SV=1 B1AUD9; Q9DBG9 Tax1-binding protein 3 OS=Mus musculus OX=10090 GN=Tax1bp3 PE=1 SV=1; Tax1-binding protein 3 OS=Mus musculus OX=10090 GN=Tax1bp3 PE=1 SV=1 1 3 3 0.2463 0 1 1 1 368.55081 1103.63788 1103.63704 0.77 0.00028 0/0 0 0 15385126 HCD 30 MS2 34.21092 375.8 74.149 31.5993 6467 6467 6459 QEplus033719.raw F4 442.3 235.3 411.1 329 464.3 372.7 318 3.41 1 FALSE 3.35E-05 0.001174 0.648 -250 15195 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQTIEER [R].rQTIEER.[K] N-Term(TMT6plex) 6 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3UEK3; Q6A0B9; Q3TKF9; Q3UL99; Q3UM46 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; MKIAA0139 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 2 2 0.4118 0 1 1 1 580.83356 1160.65984 1160.6585 1.15 0.00067 0/0 0 0 12556735 HCD 30 MS2 6.814064 169.1 110 31.6018 6468 6468 6459 QEplus033719.raw F4 176.6 128.8 162.2 149.4 232.9 165 350 2.21 1 FALSE 0.00736 0.1182 -0.038 -250 15206 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQEVEER [R].qQEVEER.[Q] N-Term(TMT6plex) 1 D3Z0M9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx23 PE=1 SV=1 D3Z0M9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx23 PE=1 SV=1 0 2 2 0.2788 0 1 1 1 573.80243 1146.59758 1146.59523 2.05 0.00117 0/0 0 0 13083909 HCD 30 MS2 34.48949 496.9 109.941 31.6116 6471 6471 6470 QEplus033719.raw F4 508.3 449 464.4 343.9 800.7 414.9 203 2.69 1 FALSE 0.0001707 0.00389 0.53 -250 15214 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPTEEER [R].ePTEEER.[A] N-Term(TMT6plex) 4 Q80U88 Eukaryotic translation initiation factor 4H (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0038 PE=4 SV=3 Q80U88; Q9WUK2-2; Q3V244; Q9WUK2 Eukaryotic translation initiation factor 4H (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0038 PE=4 SV=3; Isoform Short of Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h; Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h PE=2 SV=1; Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h PE=1 SV=3 0 2 2 0.2672 0 1 1 1 559.78052 1118.55376 1118.5527 0.95 0.00053 0/0 0 0 10659162 HCD 30 MS2 3.320302 305.1 110 31.6141 6472 6472 6470 QEplus033719.raw F4 333.6 240.9 307 248.4 410.1 290.5 92 2.47 1 FALSE 0.0002518 0.005161 0.497 -250 15217 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHEAQDAGYR [R].aHEAQDAGYR.[M] N-Term(TMT6plex) 13 E0CZ78; B2RRX2 Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp3cb PE=1 SV=1;Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp3ca PE=2 SV=1 Q3UXV4; Q9D5R5; E9Q6P2; E0CZ78; Q80XK0; P48455; P48453-2; B2RRX2; G3X8U7; P63328-2; A0A6B9EQU3; P48453; A0A2I3BPC5 Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp3cb PE=2 SV=1; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp3cc PE=2 SV=1; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp3cb PE=1 SV=1; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp3cb PE=1 SV=1; Serine/threonine-protein phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Ppp3cc PE=2 SV=1; Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform OS=Mus musculus OX=10090 GN=Ppp3cc PE=1 SV=1; Isoform 1 of Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Mus musculus OX=10090 GN=Ppp3cb; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp3ca PE=2 SV=1; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp3cb PE=1 SV=1; Isoform 2 of Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Mus musculus OX=10090 GN=Ppp3ca; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp3cb PE=2 SV=1; Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Mus musculus OX=10090 GN=Ppp3cb PE=1 SV=2; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp3cc PE=1 SV=1 0 3 3 0.7909 0 1 1 1 449.56 1346.66544 1346.66504 0.29 0.00013 0/0 0 0 36522596 HCD 30 MS2 44.0141 398.3 34.865 31.6164 6473 6473 6470 QEplus033719.raw F4 507.1 285 437.3 342.1 425.6 392.5 101 4.16 2 FALSE 1.14E-05 2.01E-06 1.18 -250 15225 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAQDSSSYR [R].eAQDSSSYR.[R] N-Term(TMT6plex) 3 Q543N3 LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 A2A6H0; Q543N3; A2A6G9 LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 0 2 2 0.676 0 1 1 1 636.30817 1271.60906 1271.60652 1.99 0.00127 0/0 0 0 15555048 HCD 30 MS2 13.27067 485.8 110 31.6189 6474 6474 6470 QEplus033719.raw F4 464.8 568.3 524.1 316.6 664 376.8 57 3.21 1 FALSE 1.14E-05 5.62E-05 0.905 -250 15230 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQTSHANLR [R].aQTSHANLR.[A] N-Term(TMT6plex) 4 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0; Q8C7E8 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.5282 0 1 1 1 613.84448 1226.68169 1226.6803 1.13 0.00069 0/0 0 0 9686054 HCD 30 MS2 4.205751 303.5 110 31.6214 6475 6475 6470 QEplus033719.raw F4 285.8 258.9 308.6 282.7 459.8 225.1 218 3.01 1 FALSE 1.14E-05 3.01E-06 1.147 -250 15239 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSEEVVR [K].rSEEVVR.[L] N-Term(TMT6plex) 2 Q9DBG9 Tax1-binding protein 3 OS=Mus musculus OX=10090 GN=Tax1bp3 PE=1 SV=1 B1AUD9; Q9DBG9 Tax1-binding protein 3 OS=Mus musculus OX=10090 GN=Tax1bp3 PE=1 SV=1; Tax1-binding protein 3 OS=Mus musculus OX=10090 GN=Tax1bp3 PE=1 SV=1 1 2 2 0.2249 0 1 1 1 552.32288 1103.63848 1103.63704 1.3 0.00072 0/0 0 0 6673626.5 HCD 30 MS2 31.42433 145.3 110 31.6239 6476 6476 6470 QEplus033719.raw F4 147.8 114.3 130.6 110.5 241.7 126.6 313 2.49 1 FALSE 0.00155 0.02341 0.255 -250 15260 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHSEDAIR [R].aHSEDAIR.[N] N-Term(TMT6plex) 2 P97930 Thymidylate kinase OS=Mus musculus OX=10090 GN=Dtymk PE=1 SV=2 P97930; D3Z3R3 Thymidylate kinase OS=Mus musculus OX=10090 GN=Dtymk PE=1 SV=2; dTMP kinase OS=Mus musculus OX=10090 GN=Dtymk PE=1 SV=1 0 2 2 0.5882 0 1 1 1 564.30469 1127.6021 1127.60065 1.28 0.00072 0/0 0 0 3896961.5 HCD 30 MS2 36.58288 250.9 110 31.6314 6479 6479 6470 QEplus033719.raw F4 265.5 202.1 251.6 186 414.4 185.9 132 2.89 1 FALSE 1.14E-05 0.00025 0.781 -250 15273 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGVACTQPR [K].rGVAcTQPR.[R] N-Term(TMT6plex); C5(Carbamidomethyl) 5 Q3UKJ6 RNA helicase OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1 A0A0G2JG10; Q497W9; Q3UKJ6; Q3TFE5; Q3UDX4 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1; DEAH (Asp-Glu-Ala-His) box polypeptide 15 OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Dhx15 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Dhx15 PE=2 SV=1 1 3 3 0.3255 0 1 1 1 425.23618 1273.69397 1273.69965 -4.46 -0.00189 0/0 0 0 2035672.25 HCD 30 MS2 71.7029 283.7 110 31.6412 6482 6482 6481 QEplus033719.raw F4 367.2 158.7 367.3 229 295.7 284.5 347 2.98 1 FALSE 0.00299 0.0583 0.119 -250 15290 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVQADQERER [K].aVQADQERER.[Q] N-Term(TMT6plex) 1 Q922Q8 Leucine-rich repeat-containing protein 59 OS=Mus musculus OX=10090 GN=Lrrc59 PE=1 SV=1 Q922Q8 Leucine-rich repeat-containing protein 59 OS=Mus musculus OX=10090 GN=Lrrc59 PE=1 SV=1 1 3 3 0.6402 0 1 1 1 477.59045 1430.75681 1430.75492 1.32 0.00063 0/0 0 0 52779704 HCD 30 MS2 3.972286 339.9 24.474 31.6459 6484 6484 6481 QEplus033719.raw F4 314.2 346.3 368.8 239.5 432.2 338.1 260 4.53 1 FALSE 1.14E-05 4.55E-09 1.682 -250 15298 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSEGEVTGR [R].nSEGEVTGR.[V] N-Term(TMT6plex) 1 Q9EQ83 Gamma-sarcoglycan OS=Mus musculus OX=10090 GN=Sgcg PE=1 SV=1 Q9EQ83 Gamma-sarcoglycan OS=Mus musculus OX=10090 GN=Sgcg PE=1 SV=1 0 2 2 0.5581 0 1 1 1 589.30408 1177.60088 1177.60105 -0.14 -0.00008 0/0 0 0 6152221 HCD 30 MS2 4.25218 221.4 110 31.6507 6486 6486 6481 QEplus033719.raw F4 274.4 64.2 197.2 348.9 130.4 313.5 165 2.58 1 FALSE 1.14E-05 3.68E-05 0.94 -250 15307 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELDGERERR [R].eLDGERERR.[E] N-Term(TMT6plex) 1 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 2 3 3 0.4412 0 1 1 1 463.5867 1388.74555 1388.74436 0.86 0.0004 0/0 0 0 5782686 HCD 30 MS2 37.11899 367.8 110 31.6557 6488 6488 6481 QEplus033719.raw F4 434.1 345.7 372.4 214.3 561.3 279 291 3.06 1 FALSE 1.14E-05 0.000257 0.778 -250 15311 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVQADQERER [K].aVQADQERER.[Q] N-Term(TMT6plex) 1 Q922Q8 Leucine-rich repeat-containing protein 59 OS=Mus musculus OX=10090 GN=Lrrc59 PE=1 SV=1 Q922Q8 Leucine-rich repeat-containing protein 59 OS=Mus musculus OX=10090 GN=Lrrc59 PE=1 SV=1 1 2 2 0.5725 0 1 1 1 715.88202 1430.75676 1430.75492 1.29 0.00092 0/0 0 0 4885657 HCD 30 MS2 0 89.4 110 31.6583 6489 6489 6481 QEplus033719.raw F4 85.2 98.1 98.5 56.6 117.1 81 260 3.86 1 FALSE 1.14E-05 1.94E-08 1.562 -250 15318 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHNPAGNR [K].vHNPAGNR.[H] N-Term(TMT6plex) 2 Q3ULB1 Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1 Q3ULB1; Q921W7 Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=2 0 2 2 0.472 0 1 1 1 547.30664 1093.606 1093.60641 -0.37 -0.0002 0/0 0 0 4237185 HCD 30 MS2 43.73407 271.5 110 31.6608 6490 6490 6481 QEplus033719.raw F4 281.8 222.2 306.9 217.3 363.6 237 152 2.14 1 FALSE 5.44E-05 0.001737 0.612 -250 15328 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSSGLGGR [R].sSSGLGGR.[A] N-Term(TMT6plex) 4 Q9WV02 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1" A2AFI3; Q9WV02-2; Q9WV02; S4R1F6 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; Isoform 2 of RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1" 0 2 2 0.4422 0 1 1 1 475.26767 949.52806 949.52642 1.73 0.00082 0/0 0 0 6110253 HCD 30 MS2 23.69558 402 110 31.6706 6493 6493 6492 QEplus033719.raw F4 530.4 327.6 465.3 302.5 429.3 356.9 150 2.51 1 FALSE 0.0001813 0.003977 0.528 -250 15336 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VCHANPSER [K].vcHANPSER.[A] N-Term(TMT6plex); C2(Carbamidomethyl) 1 Q9JIF7 Coatomer subunit beta OS=Mus musculus OX=10090 GN=Copb1 PE=1 SV=1 Q9JIF7 Coatomer subunit beta OS=Mus musculus OX=10090 GN=Copb1 PE=1 SV=1 0 2 2 0.6842 0 1 1 1 649.8269 1298.64653 1298.64728 -0.58 -0.00038 0/0 0 0 2586368.5 HCD 30 MS2 0 103.8 110 31.6731 6494 6494 6492 QEplus033719.raw F4 111.9 87 95.8 94.2 151.2 82.4 107 2.28 1 FALSE 4.43E-05 0.001432 0.63 -250 15348 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSLPNSR [R].hSLPNSR.[I] N-Term(TMT6plex) 3 Q3UGW4 ATP-dependent Clp protease proteolytic subunit (Fragment) OS=Mus musculus OX=10090 GN=Clpp PE=2 SV=1 Q3UGW4; O88696; Q8CF81 "ATP-dependent Clp protease proteolytic subunit (Fragment) OS=Mus musculus OX=10090 GN=Clpp PE=2 SV=1; ATP-dependent Clp protease proteolytic subunit, mitochondrial OS=Mus musculus OX=10090 GN=Clpp PE=1 SV=1; ATP-dependent Clp protease proteolytic subunit OS=Mus musculus OX=10090 GN=Clpp PE=2 SV=1" 0 2 2 0.3654 0 1 1 1 520.2962 1039.58513 1039.58461 0.5 0.00026 0/0 0 0 5392495.5 HCD 30 MS2 46.64628 434.7 110 31.6778 6496 6496 6492 QEplus033719.raw F4 496.6 347.6 468 465.5 460.4 370.1 122 2.08 1 FALSE 0.002056 0.03679 0.187 -250 15371 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADGAGDEAAER [R].aDGAGDEAAER.[T] N-Term(TMT6plex) 3 B9EIV8 "Solute carrier family 12, member 7 OS=Mus musculus OX=10090 GN=Slc12a7 PE=2 SV=1" A0A1Y7VMP9; B9EIV8; Q9WVL3-2 "Solute carrier family 12 member 7 OS=Mus musculus OX=10090 GN=Slc12a7 PE=1 SV=1; Solute carrier family 12, member 7 OS=Mus musculus OX=10090 GN=Slc12a7 PE=2 SV=1; Isoform 2 of Solute carrier family 12 member 7 OS=Mus musculus OX=10090 GN=Slc12a7" 0 2 2 0.7062 0 1 1 1 645.81091 1290.61455 1290.61234 1.71 0.00111 0/0 0 0 1564677.5 HCD 30 MS2 21.01025 57 110 31.6905 6501 6501 6492 QEplus033719.raw F4 59.3 47.8 55.9 40.7 84.7 53.4 41 3.37 1 FALSE 1.14E-05 0.000125 0.839 -250 15375 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETADQEPER [K].eTADQEPER.[S] N-Term(TMT6plex) 1 Q921N6 Probable ATP-dependent RNA helicase DDX27 OS=Mus musculus OX=10090 GN=Ddx27 PE=1 SV=3 Q921N6 Probable ATP-dependent RNA helicase DDX27 OS=Mus musculus OX=10090 GN=Ddx27 PE=1 SV=3 0 2 2 0.6805 0 1 1 1 652.32336 1303.63945 1303.63274 5.15 0.00336 0/0 0 0 1532905.375 HCD 30 MS2 0 72 110 31.6931 6502 6502 6492 QEplus033719.raw F4 90.5 51.6 69.8 40 94.9 84.9 64 3.13 1 FALSE 1.14E-05 5.59E-07 1.285 -250 15397 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YSAQGER [K].ySAQGER.[Q] N-Term(TMT6plex) 1 Q9D1M4 Eukaryotic translation elongation factor 1 epsilon-1 OS=Mus musculus OX=10090 GN=Eef1e1 PE=1 SV=1 Q9D1M4 Eukaryotic translation elongation factor 1 epsilon-1 OS=Mus musculus OX=10090 GN=Eef1e1 PE=1 SV=1 0 2 2 0.5221 0 1 1 1 520.27246 1039.53765 1039.53699 0.63 0.00033 0/0 0 0 5584240.5 HCD 30 MS2 51.33566 561.4 110 31.7124 6509 6509 6503 QEplus033719.raw F4 597.9 442.4 610.6 579.1 582.2 556 70 2.72 1 FALSE 0.0002119 0.004322 0.518 -250 15415 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVECAR [K].nVEcAR.[V] N-Term(TMT6plex); C4(Carbamidomethyl) 1 Q921W0 Charged multivesicular body protein 1a OS=Mus musculus OX=10090 GN=Chmp1a PE=1 SV=1 Q921W0 Charged multivesicular body protein 1a OS=Mus musculus OX=10090 GN=Chmp1a PE=1 SV=1 0 2 2 0.366 0 1 1 1 489.2558 977.50432 977.50358 0.76 0.00037 0/0 0 0 10717250 HCD 30 MS2 33.48243 545.5 110 31.7224 6513 6513 6503 QEplus033719.raw F4 789.1 397 652.1 459.5 452.4 522.7 153 1.94 1 FALSE 0.002056 0.03746 0.184 -250 15435 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNQITNNQR [K].nNQITNNQR.[I] N-Term(TMT6plex) 4 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 P09041; P09411; S4R2M7; B0LAA9 Phosphoglycerate kinase 2 OS=Mus musculus OX=10090 GN=Pgk2 PE=1 SV=4; Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4; Phosphoglycerate kinase OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=1; Phosphoglycerate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pgk1 PE=2 SV=1 0 2 2 0.651 0 1 1 1 665.85541 1330.70354 1330.70249 0.79 0.00052 0/0 0 0 67968832 HCD 30 MS2 0 25.977 31.7346 6517 6517 6514 QEplus033719.raw F4 248 2.98 1 FALSE 1.14E-05 8.75E-05 0.868 -250 15441 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EASTTVR [K].eASTTVR.[V] N-Term(TMT6plex) 1 Q6GQT9 Nodal modulator 1 OS=Mus musculus OX=10090 GN=Nomo1 PE=1 SV=1 Q6GQT9 Nodal modulator 1 OS=Mus musculus OX=10090 GN=Nomo1 PE=1 SV=1 0 2 2 0.3992 0 1 1 1 496.78284 992.5584 992.55739 1.01 0.0005 0/0 0 0 5947505.5 HCD 30 MS2 23.32813 369.9 110 31.737 6518 6518 6514 QEplus033719.raw F4 525.2 252.2 444.3 349.6 294.9 353.2 84 2.43 1 FALSE 0.001101 0.01419 0.343 -250 15447 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETQTDSVSR [R].eTQTDSVSR.[Y] N-Term(TMT6plex) 4 Q9DBR7 Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2 Q3TS88; Q9DBR7; A0A1W2P750; Q9DBR7-2 PRKG1_interact domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ppp1r12a PE=2 SV=1; Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2; Protein phosphatase 1 regulatory subunit 12A (Fragment) OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=1; Isoform 2 of Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a 0 2 2 0.5467 0 1 1 1 626.32349 1251.6397 1251.63783 1.49 0.00094 0/0 0 0 5439649.5 HCD 30 MS2 0 233.9 110 31.7396 6519 6519 6514 QEplus033719.raw F4 240.6 207.7 257.8 191.2 285.4 220.8 153 2.89 1 FALSE 1.14E-05 2.73E-06 1.155 -250 15454 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTFEQNSR [K].hTFEQNSR.[I] N-Term(TMT6plex) 2 E9QAT4 Protein transport protein Sec16A OS=Mus musculus OX=10090 GN=Sec16a PE=1 SV=1 E9QAT4; E9QAT4-2 Protein transport protein Sec16A OS=Mus musculus OX=10090 GN=Sec16a PE=1 SV=1; Isoform 2 of Protein transport protein Sec16A OS=Mus musculus OX=10090 GN=Sec16a 0 3 3 0.67 0 1 1 1 416.54953 1247.63404 1247.63301 0.82 0.00034 0/0 0 0 4918250.5 HCD 30 MS2 43.70246 269.5 110 31.742 6520 6520 6514 QEplus033719.raw F4 757.9 119.5 194.3 177.4 202.8 164.9 145 2.97 1 FALSE 5.44E-05 0.001986 0.599 -250 15477 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSECVNTR [K].dSEcVNTR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 4 O08999 Latent-transforming growth factor beta-binding protein 2 OS=Mus musculus OX=10090 GN=Ltbp2 PE=1 SV=2 O08999; Q0VD84; E9Q1D6; E9QNQ3 Latent-transforming growth factor beta-binding protein 2 OS=Mus musculus OX=10090 GN=Ltbp2 PE=1 SV=2; Latent-transforming growth factor beta-binding protein 2 OS=Mus musculus OX=10090 GN=Ltbp2 PE=1 SV=1; Latent-transforming growth factor beta-binding protein 2 OS=Mus musculus OX=10090 GN=Ltbp2 PE=1 SV=1; Latent-transforming growth factor beta-binding protein 2 OS=Mus musculus OX=10090 GN=Ltbp2 PE=1 SV=1 0 2 2 0.4015 0 1 1 1 605.28979 1209.57231 1209.57312 -0.66 -0.0004 0/0 0 0 1248015.625 HCD 30 MS2 49.64885 120.9 110 31.7496 6523 6523 6514 QEplus033719.raw F4 152 84.7 138.4 120.4 99.8 129.9 47 2.69 1 FALSE 1.14E-05 0.0001387 0.83 -250 15510 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEEAEREER [R].eAEEAEREER.[K] N-Term(TMT6plex) 1 Q80WW9 DDRGK domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ddrgk1 PE=1 SV=2 Q80WW9 DDRGK domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ddrgk1 PE=1 SV=2 1 3 3 0.5718 0 1 1 1 492.90933 1476.71344 1476.71278 0.45 0.00022 0/0 0 0 11527934 HCD 30 MS2 24.21778 360.6 110 31.7664 6529 6529 6525 QEplus033719.raw F4 333.7 293.3 375.9 356.3 385.5 419 86 3.41 1 FALSE 1.14E-05 1.92E-05 0.994 -250 15516 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMAQEER [R].gMAQEER.[L] N-Term(TMT6plex) 8 Q3UVN0 RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1 Q3TPL7; Q8VDW0-2; Q3U837; Q3UVN0; Q3TIE4; Q3T9L0; Q8VDW0; Q3UAF1 RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; Isoform 2 of ATP-dependent RNA helicase DDX39A OS=Mus musculus OX=10090 GN=Ddx39a; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; ATP-dependent RNA helicase DDX39A OS=Mus musculus OX=10090 GN=Ddx39a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1 0 2 2 0.3677 0 1 1 1 525.26636 1049.52544 1049.52471 0.69 0.00036 0/0 0 0 8876995 HCD 30 MS2 47.38903 711.5 103.986 31.7688 6530 6530 6525 QEplus033719.raw F4 857.9 640.8 741.1 485.5 941.5 602.1 122 2.23 1 FALSE 0.0006216 0.009222 0.417 -250 15522 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRQPVEAGAR [K].dRQPVEAGAR.[F] N-Term(TMT6plex) 5 A0A1W2P6H1 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2 A0A1W2P6H1; H7BX05; A2AAJ9; E9QQ96; Z4YJE4 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Obscurin OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3 1 3 3 0.6014 0 1 1 1 443.24765 1327.7284 1327.72798 0.32 0.00014 0/0 0 0 8013628 HCD 30 MS2 17.06811 242.2 110 31.7713 6531 6531 6525 QEplus033719.raw F4 327.1 84.4 220.4 362.2 114.2 345 272 4.34 1 FALSE 1.14E-05 1.26E-08 1.598 -250 15535 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TKEEEQQR [K].tkEEEQQR.[L] N-Term(TMT6plex); K2(TMT6plex) 3 Q5SX40; Q5SX39 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1 Q5SX40; Q5SX39; B2RWX0 "Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1" 1 3 3 0.5167 0 1 1 1 502.61652 1505.835 1505.83239 1.73 0.00087 0/0 0 0 6712166 HCD 30 MS2 35.34849 502.2 110 31.7763 6533 6533 6525 QEplus033719.raw F4 1741.3 91.4 176.7 376.4 130.5 497 421 2.4 2 FALSE 5.44E-05 0.00209 0.594 -250 15543 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHREEMEVR [R].sHREEMEVR.[V] N-Term(TMT6plex) 2 Q08024-2 Isoform 2 of Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb Q3UYR3; Q08024-2 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cbfb PE=2 SV=1; Isoform 2 of Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb 1 3 3 0.5667 0 1 1 1 467.90909 1401.71271 1401.71061 1.5 0.0007 0/0 0 0 6403738.5 HCD 30 MS2 17.00556 278.5 110 31.7788 6534 6534 6525 QEplus033719.raw F4 327.9 235.5 351.3 229.9 256.2 270.1 169 3.3 1 FALSE 1.14E-05 9.40E-06 1.053 -250 15549 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNNLNREDAEAR [K].rNNLNREDAEAR.[I] N-Term(TMT6plex) 2 Q8BHC4 Dephospho-CoA kinase domain-containing protein OS=Mus musculus OX=10090 GN=Dcakd PE=1 SV=1 Q6PDP7; Q8BHC4 Dcakd protein (Fragment) OS=Mus musculus OX=10090 GN=Dcakd PE=2 SV=1; Dephospho-CoA kinase domain-containing protein OS=Mus musculus OX=10090 GN=Dcakd PE=1 SV=1 2 3 3 0.6049 0 1 1 1 562.96667 1686.88547 1686.88331 1.28 0.00072 0/0 0 0 5156775.5 HCD 30 MS2 9.734403 98.8 110 31.7813 6535 6535 6525 QEplus033719.raw F4 104.1 84.4 114.6 73.5 108.1 108.2 246 2.86 1 FALSE 5.44E-05 0.001823 0.607 -250 15554 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQVDTQDQAR [K].sQVDTQDQAR.[R] N-Term(TMT6plex) 2 Q3U186 "Probable arginine--tRNA ligase, mitochondrial OS=Mus musculus OX=10090 GN=Rars2 PE=1 SV=1" A2AT41; Q3U186 "Probable arginine--tRNA ligase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Rars2 PE=1 SV=1; Probable arginine--tRNA ligase, mitochondrial OS=Mus musculus OX=10090 GN=Rars2 PE=1 SV=1" 0 2 2 0.6908 0 1 1 1 688.85315 1376.69902 1376.69674 1.66 0.00114 0/0 0 0 7327030.5 HCD 30 MS2 2.694259 185.4 110 31.7886 6537 6537 6536 QEplus033719.raw F4 187.2 154.8 194.2 198.6 159 218.8 175 3.59 1 FALSE 1.14E-05 1.22E-08 1.601 -250 15561 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NENPNGPTEGSDR [R].nENPNGPTEGSDR.[S] N-Term(TMT6plex) 2 P61793 Lysophosphatidic acid receptor 1 OS=Mus musculus OX=10090 GN=Lpar1 PE=1 SV=1 P61793; P61793-2 Lysophosphatidic acid receptor 1 OS=Mus musculus OX=10090 GN=Lpar1 PE=1 SV=1; Isoform 2 of Lysophosphatidic acid receptor 1 OS=Mus musculus OX=10090 GN=Lpar1 0 2 2 0.7024 0 1 1 1 808.38055 1615.75383 1615.75096 1.78 0.00144 0/0 0 0 2765906.5 HCD 30 MS2 0 72.4 110 31.7912 6538 6538 6536 QEplus033719.raw F4 64.5 70.3 99.8 69.4 41 89.5 52 3.73 1 FALSE 1.14E-05 1.28E-09 1.787 -250 15566 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGLDDER [R].rGLDDER.[G] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.5049 0 1 1 1 363.86682 1089.58591 1089.585 0.83 0.0003 0/0 0 0 18963998 HCD 30 MS2 15.66392 239.7 54.865 31.7934 6539 6539 6536 QEplus033719.raw F4 284.3 180.5 223.3 230.8 272.6 246.5 267 3.09 1 FALSE 2.26E-05 0.001078 0.655 -250 15580 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIDTHTHR [R].dIDTHTHR.[I] N-Term(TMT6plex) 2 Q810A7 ATP-dependent RNA helicase DDX42 OS=Mus musculus OX=10090 GN=Ddx42 PE=1 SV=3 Q810A7; Q810A7-2 ATP-dependent RNA helicase DDX42 OS=Mus musculus OX=10090 GN=Ddx42 PE=1 SV=3; Isoform 2 of ATP-dependent RNA helicase DDX42 OS=Mus musculus OX=10090 GN=Ddx42 0 3 3 0.737 0 1 1 1 408.54965 1223.6344 1223.63301 1.13 0.00046 0/0 0 0 13757499 HCD 30 MS2 8.600972 287.2 110 31.7982 6541 6541 6536 QEplus033719.raw F4 328.9 225.1 291.2 232.8 385.3 260.1 158 4.22 1 FALSE 1.14E-05 5.51E-06 1.097 -250 15589 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVDDDSDER [K].dVDDDSDER.[V] N-Term(TMT6plex) 3 Q6P542 ATP-binding cassette sub-family F member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=1 SV=1 Q6P542; Q5RL55; A1A4B8 "ATP-binding cassette sub-family F member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=1 SV=1; ATP-binding cassette, sub-family F (GCN20), member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=2 SV=1; Abcf1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abcf1 PE=2 SV=1" 0 2 2 1 0 1 1 1 647.78418 1294.56108 1294.55963 1.12 0.00072 0/0 0 0 12262580 HCD 30 MS2 8.547723 456.1 110 31.8007 6542 6542 6536 QEplus033719.raw F4 459.7 351.2 467.4 392.5 523.9 541.9 5 3.88 1 FALSE 1.14E-05 5.44E-06 1.098 -250 15600 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EREQQIEEHR [R].eREQQIEEHR.[R] N-Term(TMT6plex) 4 A0A0R4J1E3 Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1 Q9QXS6-3; Q9QXS6; A0A0R4J1E3; Q9QXS6-2 Isoform E2 of Drebrin OS=Mus musculus OX=10090 GN=Dbn1; Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=4; Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1; Isoform A2 of Drebrin OS=Mus musculus OX=10090 GN=Dbn1 1 3 3 0.703 0 1 1 1 528.27667 1582.81546 1582.8135 1.24 0.00066 0/0 0 0 6765454.5 HCD 30 MS2 18.61345 232.1 110 31.8056 6544 6544 6536 QEplus033719.raw F4 245 168.9 291.3 185.2 256.7 245.3 241 5.32 1 FALSE 1.14E-05 1.61E-10 1.958 -250 15612 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QYETAR [K].qYETAR.[H] N-Term(TMT6plex) 4 Q8BKT7 THO complex subunit 5 homolog OS=Mus musculus OX=10090 GN=Thoc5 PE=1 SV=2 Q5SVF9; Q5SVF8; Q8BKT7; A0A0R4J0J6 THO complex subunit 5 homolog OS=Mus musculus OX=10090 GN=Thoc5 PE=1 SV=1; THO complex subunit 5 homolog (Fragment) OS=Mus musculus OX=10090 GN=Thoc5 PE=1 SV=8; THO complex subunit 5 homolog OS=Mus musculus OX=10090 GN=Thoc5 PE=1 SV=2; THO complex subunit 5 homolog OS=Mus musculus OX=10090 GN=Thoc5 PE=1 SV=1 0 2 2 0.535 0 1 1 1 498.77005 996.53282 996.53118 1.65 0.00082 0/0 0 0 4233391.5 HCD 30 MS2 43.78859 435.1 110 31.8106 6546 6546 6536 QEplus033719.raw F4 468.1 364.8 459.8 366.9 546.2 405.1 73 2 1 FALSE 0.002056 0.03691 0.186 -250 15633 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEGNDHIER [K].aEGNDHIER.[A] N-Term(TMT6plex) 1 Q6GQT9 Nodal modulator 1 OS=Mus musculus OX=10090 GN=Nomo1 PE=1 SV=1 Q6GQT9 Nodal modulator 1 OS=Mus musculus OX=10090 GN=Nomo1 PE=1 SV=1 0 3 3 0.7146 0 1 1 1 423.88489 1269.64011 1269.63849 1.27 0.00054 0/0 0 0 28903478 HCD 30 MS2 14.73433 330 44.042 31.8227 6550 6550 6547 QEplus033719.raw F4 426.4 222.7 320.2 313.3 331.6 366 124 4.8 1 FALSE 1.14E-05 2.16E-06 1.174 -250 15640 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQELTHQEHR [R].qQELTHQEHR.[V] N-Term(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 4 4 0.5663 0 1 1 1 384.45401 1534.79421 1534.79237 1.2 0.00046 0/0 0 0 22481334 HCD 30 MS2 16.13893 153.4 48.788 31.8249 6551 6551 6547 QEplus033719.raw F4 176.8 111.1 167.3 123.4 188.7 152.9 232 3.62 1 FALSE 1.14E-05 0.0001937 0.802 -250 15660 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQELTHQEHR [R].qQELTHQEHR.[V] N-Term(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 3 3 0.6882 0 1 1 1 512.26971 1534.79459 1534.79237 1.45 0.00074 0/0 0 0 12982947 HCD 30 MS2 10.24907 357.2 110 31.8342 6555 6555 6547 QEplus033719.raw F4 363.7 286.3 390.1 289.8 447.4 366 245 6.19 1 FALSE 1.14E-05 4.68E-13 2.439 -250 15669 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAPGEPR [R].gAPGEPR.[R] N-Term(TMT6plex) 2 Q9JI99 Sphingosine-1-phosphate phosphatase 1 OS=Mus musculus OX=10090 GN=Sgpp1 PE=1 SV=1 Q9JI99; A0A1W2P6K9 Sphingosine-1-phosphate phosphatase 1 OS=Mus musculus OX=10090 GN=Sgpp1 PE=1 SV=1; Sphingosine-1-phosphate phosphatase 1 OS=Mus musculus OX=10090 GN=Sgpp1 PE=1 SV=1 0 2 2 0.3081 0 1 1 1 456.75922 912.51116 912.51005 1.22 0.00055 0/0 0 0 7801938 HCD 30 MS2 46.95305 554.9 110 31.8367 6556 6556 6547 QEplus033719.raw F4 536.9 463.9 577.6 442.8 791.6 516.8 22 1.85 1 FALSE 0.004724 0.08307 0.053 -250 15671 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVASGAAR [R].eVASGAAR.[I] N-Term(TMT6plex) 11 Q3UIX8; A0A0J9YUM4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctbp2 PE=2 SV=1;C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1 PE=1 SV=1 A0A0J9YTW3; O88712-2; Q3UIX8; P56546; A0A0J9YUM4; Q91YZ2; A0A0J9YU62; O88712-3; P56546-2; E9PWQ9; O88712 C-terminal-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ctbp1 PE=1 SV=1; Isoform 2 of C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctbp2 PE=2 SV=1; C-terminal-binding protein 2 OS=Mus musculus OX=10090 GN=Ctbp2 PE=1 SV=2; C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1 PE=1 SV=1; C-terminal-binding protein 2 OS=Mus musculus OX=10090 GN=Ctbp2 PE=1 SV=1; C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1 PE=1 SV=1; Isoform 3 of C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1; Isoform 2 of C-terminal-binding protein 2 OS=Mus musculus OX=10090 GN=Ctbp2; C-terminal-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Ctbp2 PE=1 SV=1; C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1 PE=1 SV=2 0 2 2 0.3897 0 1 1 1 495.28271 989.55815 989.55772 0.43 0.00021 0/0 0 0 6392772 HCD 30 MS2 19.95412 547.5 110 31.8392 6557 6557 6547 QEplus033719.raw F4 815.8 425.7 621.8 444 510.1 467.6 215 2.72 2 FALSE 1.14E-05 0.0002644 0.776 -250 15676 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGAPTQADSR [R].tGAPTQADSR.[G] N-Term(TMT6plex) 1 Q64152 Transcription factor BTF3 OS=Mus musculus OX=10090 GN=Btf3 PE=1 SV=3 Q64152 Transcription factor BTF3 OS=Mus musculus OX=10090 GN=Btf3 PE=1 SV=3 0 2 2 0.5892 0 1 1 1 616.82629 1232.64531 1232.64324 1.68 0.00103 0/0 0 0 4497643 HCD 30 MS2 6.134341 173.6 110 31.849 6560 6560 6558 QEplus033719.raw F4 187.5 160.6 168.5 124 228.2 172.8 192 2.41 1 FALSE 0.0002909 0.00586 0.482 -250 15689 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYNGGVGR [R].rYNGGVGR.[C] N-Term(TMT6plex) 5 Q80V08 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1 Q80V08; Q9CPR4; Q6ZWZ7; Q6PHZ1; Q505B1 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=1 SV=3; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=1 SV=1; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1; 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1 1 3 3 0.4862 0 1 1 1 369.87921 1107.62308 1107.62206 0.93 0.00034 0/0 0 0 21708156 HCD 30 MS2 8.949527 220.3 68.493 31.8535 6562 6562 6558 QEplus033719.raw F4 231.7 170.5 228.6 228.4 253.9 209 182 3.25 1 FALSE 0.0005556 0.008591 0.428 -250 15697 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGEQISR [R].gGEQISR.[I] N-Term(TMT6plex) 14 A2AJ72; A0A0G2JFY5 Far upstream element (FUSE)-binding protein 3 OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1;Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1 A2AJ72; A0A0G2JFY5; Q91WJ8-2; Q3TIX6; A0A0G2JGW9; Q0P6B2; A0A0G2JG00; A0A0G2JFK2; Q3TUE1; Q91WJ8; Q3UUU2; Q3ULP9; A0A0A6YY39; Q3TIS5 Far upstream element (FUSE)-binding protein 3 OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Isoform 2 of Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1; Far upstream element (FUSE)-binding protein 3 OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element (FUSE) binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=2 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fubp3 PE=2 SV=1; Far upstream element (FUSE)-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fubp1 PE=2 SV=1 0 2 2 0.3125 0 1 1 1 488.27512 975.54296 975.54207 0.9 0.00044 0/0 0 0 21095554 HCD 30 MS2 27.43 730.1 71.216 31.8558 6563 6563 6558 QEplus033719.raw F4 854.4 627.3 723.4 621.3 956.9 597.1 167 2.08 2 FALSE 0.0003312 0.006384 0.47 -250 15705 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVGTHIR [K].rVGTHIR.[A] N-Term(TMT6plex) 3 Q6ZWZ4 60S ribosomal protein L36 OS=Mus musculus OX=10090 GN=Rpl36 PE=1 SV=1 Q6ZWZ4; P47964; Q5M9L1 60S ribosomal protein L36 OS=Mus musculus OX=10090 GN=Rpl36 PE=1 SV=1; 60S ribosomal protein L36 OS=Mus musculus OX=10090 GN=Rpl36 PE=1 SV=2; 60S ribosomal protein L36 OS=Mus musculus OX=10090 GN=Rpl36 PE=2 SV=1 1 3 3 0.3417 0 1 1 1 356.55966 1067.66443 1067.66353 0.85 0.0003 0/0 0 0 12642561 HCD 30 MS2 14.13595 323.9 110 31.8605 6565 6565 6558 QEplus033719.raw F4 377.8 221.5 352.6 293 411 287.8 21 3.57 1 FALSE 0.001301 0.01776 0.302 -250 15715 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGPSEVR [K].gGPSEVR.[E] N-Term(TMT6plex) 10 Q9JLM8 Serine/threonine-protein kinase DCLK1 OS=Mus musculus OX=10090 GN=Dclk1 PE=1 SV=1 Q9JLM8; Q9JLM8-2; Q3UGP0; Q80VB6; Q9JLM7; A0A0G2JGQ6; A3KN70; Q8CHG1; Q8BRN4; Q8VDT3 Serine/threonine-protein kinase DCLK1 OS=Mus musculus OX=10090 GN=Dclk1 PE=1 SV=1; Isoform 2 of Serine/threonine-protein kinase DCLK1 OS=Mus musculus OX=10090 GN=Dclk1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dclk1 PE=2 SV=1; Dclk1 protein OS=Mus musculus OX=10090 GN=Dclk1 PE=1 SV=1; Doublecortin-like protein OS=Mus musculus OX=10090 GN=Dclk1 PE=2 SV=1; Serine/threonine-protein kinase DCLK1 OS=Mus musculus OX=10090 GN=Dclk1 PE=1 SV=1; Dclk1 protein OS=Mus musculus OX=10090 GN=Dclk1 PE=2 SV=1; MKIAA0369 protein (Fragment) OS=Mus musculus OX=10090 GN=Dclk1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dclk1 PE=2 SV=1; Dclk1 protein OS=Mus musculus OX=10090 GN=Dclk1 PE=2 SV=1 0 2 2 0.3684 0 1 1 1 465.76456 930.52184 930.52061 1.32 0.00061 0/0 0 0 10081450 HCD 30 MS2 28.3691 669.9 100.566 31.8628 6566 6566 6558 QEplus033719.raw F4 909.7 236.2 674.7 884.3 419.1 895.4 123 2.28 1 FALSE 0.00155 0.02347 0.254 -250 15728 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVEAGNTGR [R].qVEAGNTGR.[V] N-Term(TMT6plex) 5 F6W2Q5 Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1 F6W2Q5; H3BJB8; Q5JC28; P42567; H3BK65 Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1; Epidermal growth factor receptor substrate 15 (Fragment) OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1; Epidermal growth factor receptor pathway substrate 15 isoform B OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1; Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1; Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1 0 2 2 0.5857 0 1 1 1 580.81531 1160.62334 1160.62212 1.05 0.00061 0/0 0 0 6397508 HCD 30 MS2 42.93517 327.4 110 31.8752 6570 6570 6569 QEplus033719.raw F4 379.8 240.9 324.3 296.1 420.5 302.6 253 3.21 1 FALSE 1.14E-05 3.95E-07 1.314 -250 15735 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEYCQTR [K].gEYcQTR.[Y] N-Term(TMT6plex); C4(Carbamidomethyl) 3 O35730 E3 ubiquitin-protein ligase RING1 OS=Mus musculus OX=10090 GN=Ring1 PE=1 SV=2 O35730; O35730-2; A0A068BFS4 E3 ubiquitin-protein ligase RING1 OS=Mus musculus OX=10090 GN=Ring1 PE=1 SV=2; Isoform 2 of E3 ubiquitin-protein ligase RING1 OS=Mus musculus OX=10090 GN=Ring1; E3 ubiquitin-protein ligase RING1 OS=Mus musculus OX=10090 GN=Ring1 PE=2 SV=1 0 2 2 0.6607 0 1 1 1 571.77753 1142.54778 1142.54617 1.4 0.0008 0/0 0 0 4321204 HCD 30 MS2 18.05477 257.9 110 31.8777 6571 6571 6569 QEplus033719.raw F4 258.9 263.5 251.8 210 339.7 223.3 52 2.24 1 FALSE 0.003928 0.07312 0.08 -250 15741 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGLDDER [R].rGLDDER.[G] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 2 2 0.2933 0 1 1 1 545.297 1089.58672 1089.585 1.57 0.00086 0/0 0 0 9787830 HCD 30 MS2 13.72335 259.3 110 31.8802 6572 6572 6569 QEplus033719.raw F4 317.3 200.8 268.9 238.4 269.9 260.6 267 2.25 1 FALSE 0.001293 0.01764 0.303 -250 15748 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQAEAQHDR [K].mQAEAQHDR.[E] N-Term(TMT6plex) 1 Q5F2E8 Serine/threonine-protein kinase TAO1 OS=Mus musculus OX=10090 GN=Taok1 PE=1 SV=1 Q5F2E8 Serine/threonine-protein kinase TAO1 OS=Mus musculus OX=10090 GN=Taok1 PE=1 SV=1 0 3 3 0.6061 0 1 1 1 438.88599 1314.64341 1314.6422 0.92 0.0004 0/0 0 0 8005133 HCD 30 MS2 56.44259 359.6 102.397 31.8825 6573 6573 6569 QEplus033719.raw F4 467.5 270.3 361.4 340.3 379.1 338.9 96 4.29 1 FALSE 1.14E-05 2.80E-05 0.962 -250 15754 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGQAALER [K].rGQAALER.[L] N-Term(TMT6plex) 7 A0A1B0GS68 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Gm45713 PE=2 SV=1 A0A1B0GS68; A0A1B0GTA1; A0A1B0GSC2; P19253; A0A1B0GT00; A0A1B0GSQ6; A0A1B0GSB2 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Gm45713 PE=2 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=4; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1 1 3 3 0.5783 0 1 1 1 377.22675 1129.66568 1129.66392 1.56 0.00059 0/0 0 0 6555350.5 HCD 30 MS2 31.58728 244.8 110 31.885 6574 6574 6569 QEplus033719.raw F4 311.1 181.4 242.5 208.9 263.5 261.5 284 3.96 1 FALSE 1.14E-05 1.73E-05 1.002 -250 15758 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQELTHQEHR [R].qQELTHQEHR.[V] N-Term(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 2 2 0.6371 0 1 1 1 767.90076 1534.79424 1534.79237 1.22 0.00093 0/0 0 0 6416152.5 HCD 30 MS2 0 143.2 110 31.8876 6575 6575 6569 QEplus033719.raw F4 160.7 107.8 145.5 121.5 170 153.6 232 3.94 1 FALSE 1.14E-05 2.25E-08 1.55 -250 15764 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSAPGGGNK [K].rSAPGGGNk.[V] N-Term(TMT6plex); K9(TMT6plex) 9 Q5SQB7 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1 Q5SQB7; Q5SQB0; Q8BSZ3; Q5BL09; Q5U438; Q9DAY9; Q3UDA7; Q5SQB5; Q3U536 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Npm1 protein OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1 1 3 3 0.2372 0 1 1 1 434.59518 1301.771 1301.769 1.53 0.00067 0/0 0 0 4022095.25 HCD 30 MS2 61.13544 353.5 110 31.8901 6576 6576 6569 QEplus033719.raw F4 722.7 195.4 351.3 229.3 267.7 354.6 358 2.53 1 FALSE 0.001559 0.02364 0.253 -250 15791 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEASRQEEQQRK [K].sEASRQEEQQRk.[AV] N-Term(TMT6plex); K12(TMT6plex) 4 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0; Q8C7E8 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 2 3 3 0.4175 0 1 1 1 645.35364 1934.04636 1934.04557 0.41 0.00026 0/0 0 0 2266696 HCD 30 MS2 24.90133 59.4 110 31.8976 6579 6579 6569 QEplus033719.raw F4 63.8 49.5 61.2 47.3 80.4 54.2 430 1.94 1 FALSE 0.0008445 0.01162 0.379 -250 15805 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HNQRPTFR [K].hNQRPTFR.[Q] N-Term(TMT6plex) 7 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; B7FAV1; F6XC15; B9EKP5; Q8BTM8-2; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Isoform 2 of Filamin-A OS=Mus musculus OX=10090 GN=Flna; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.4925 0 1 1 1 428.90958 1284.71418 1284.71227 1.49 0.00064 0/0 0 0 7007352.5 HCD 30 MS2 4.489355 316.3 110 31.9099 6583 6583 6580 QEplus033719.raw F4 327.9 300.3 360.7 202.1 418.9 287.6 262 2.66 1 FALSE 0.00079 0.01087 0.39 -250 15818 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSCSTIR [R].gScSTIR.[I] N-Term(TMT6plex); C3(Carbamidomethyl) 10 Q1PG84 PBK1 OS=Mus musculus domesticus OX=10092 GN=Rsl1d1 PE=2 SV=1 Q3TAJ5; Q1PG84; Q3TGI9; Q9CSF9; Q3TS64; Q3TLJ3; Q3TH37; Q3TN25; Q8BVY0; Q3UL54 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; PBK1 OS=Mus musculus domesticus OX=10092 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Ribosomal L1 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rsl1d1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1 0 2 2 0.4977 0 1 1 1 505.26935 1009.53142 1009.5298 1.61 0.00081 0/0 0 0 5127863.5 HCD 30 MS2 38.34985 414.4 110 31.9149 6585 6585 6580 QEplus033719.raw F4 465.4 349.7 487.4 389 466.1 328.6 114 2.21 1 FALSE 0.0005556 0.008551 0.429 -250 15846 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TCIHTNGR [R].tcIHTNGR.[V] N-Term(TMT6plex); C2(Carbamidomethyl) 4 P10605 Cathepsin B OS=Mus musculus OX=10090 GN=Ctsb PE=1 SV=2 P10605; Q6LAF6; Q3TC17; Q3TVS6 Cathepsin B OS=Mus musculus OX=10090 GN=Ctsb PE=1 SV=2; Cathepsin B (Fragment) OS=Mus musculus OX=10090 GN=Ctsb PE=2 SV=1; Cathepsin B OS=Mus musculus OX=10090 GN=Ctsb PE=2 SV=1; Cathepsin B OS=Mus musculus OX=10090 GN=Ctsb PE=2 SV=1 0 2 2 0.6828 0 1 1 1 594.31207 1187.61687 1187.61526 1.36 0.00081 0/0 0 0 3081078.5 HCD 30 MS2 23.26904 175.2 110 31.9249 6589 6589 6580 QEplus033719.raw F4 217.7 137.6 176.1 164.7 200.9 154.1 119 2.68 1 FALSE 1.14E-05 0.0004898 0.724 -250 15857 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HHLQDDVR [R].hHLQDDVR.[V] N-Term(TMT6plex) 1 Q8BWM0 Prostaglandin E synthase 2 OS=Mus musculus OX=10090 GN=Ptges2 PE=1 SV=3 Q8BWM0 Prostaglandin E synthase 2 OS=Mus musculus OX=10090 GN=Ptges2 PE=1 SV=3 0 3 3 0.6317 0 1 1 1 416.89465 1248.66941 1248.66465 3.81 0.00159 0/0 0 0 2948005.25 HCD 30 MS2 38.77882 206.4 110 31.9347 6592 6592 6591 QEplus033719.raw F4 432.8 108.4 174.9 159.5 189 173.6 238 3.15 1 FALSE 1.14E-05 3.55E-05 0.943 -250 15864 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSDENSSIGR [R].nSDENSSIGR.[A] N-Term(TMT6plex) 7 E9Q3Y4 Lipopolysaccharide-responsive and beige-like anchor protein OS=Mus musculus OX=10090 GN=Lrba PE=1 SV=1 E9Q3Y4; A0A0A6YXL6; A0A0A6YXX3; Q9ESE1-2; A0A1D5RM41; Q9ESE1-3; Q9ESE1 Lipopolysaccharide-responsive and beige-like anchor protein OS=Mus musculus OX=10090 GN=Lrba PE=1 SV=1; Lipopolysaccharide-responsive and beige-like anchor protein OS=Mus musculus OX=10090 GN=Lrba PE=1 SV=1; Lipopolysaccharide-responsive and beige-like anchor protein OS=Mus musculus OX=10090 GN=Lrba PE=1 SV=1; Isoform 2 of Lipopolysaccharide-responsive and beige-like anchor protein OS=Mus musculus OX=10090 GN=Lrba; Lipopolysaccharide-responsive and beige-like anchor protein (Fragment) OS=Mus musculus OX=10090 GN=Lrba PE=1 SV=1; Isoform 3 of Lipopolysaccharide-responsive and beige-like anchor protein OS=Mus musculus OX=10090 GN=Lrba; Lipopolysaccharide-responsive and beige-like anchor protein OS=Mus musculus OX=10090 GN=Lrba PE=1 SV=1 0 2 2 0.6094 0 1 1 1 654.32263 1307.63799 1307.63889 -0.69 -0.00045 0/0 0 0 759618.8125 HCD 30 MS2 66.67383 74.1 110 31.9372 6593 6593 6591 QEplus033719.raw F4 89.5 46.3 70.7 69.6 78.1 90.7 91 3.2 1 FALSE 1.14E-05 2.54E-09 1.73 -250 15870 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETVATR [K].eTVATR.[V] N-Term(TMT6plex) 2 Q9DBG5 Perilipin-3 OS=Mus musculus OX=10090 GN=Plin3 PE=1 SV=1 Q9DBG5; Q2XSQ4 Perilipin-3 OS=Mus musculus OX=10090 GN=Plin3 PE=1 SV=1; Perilipin OS=Mus musculus OX=10090 GN=Plin3 PE=2 SV=1 0 2 2 0.2454 0 1 1 1 453.26675 905.52623 905.52536 0.96 0.00043 0/0 0 0 23909094 HCD 30 MS2 33.57738 590.5 34.433 31.9417 6595 6595 6591 QEplus033719.raw F4 798.7 402 760.7 454 649.2 478.2 93 2.16 1 FALSE 0.003851 0.07257 0.081 -250 15883 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPISETR [K].rPISETR.[F] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.4306 0 1 1 1 363.21909 1087.6427 1087.64212 0.53 0.00019 0/0 0 0 20080286 HCD 30 MS2 9.413471 228.5 59.881 31.9463 6597 6597 6591 QEplus033719.raw F4 292 82.9 180.1 437.1 102.2 276.8 257 2.88 2 FALSE 0.001284 0.01744 0.305 -250 15902 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGQAALER [K].rGQAALER.[L] N-Term(TMT6plex) 7 A0A1B0GS68 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Gm45713 PE=2 SV=1 A0A1B0GS68; A0A1B0GTA1; A0A1B0GSC2; P19253; A0A1B0GT00; A0A1B0GSQ6; A0A1B0GSB2 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Gm45713 PE=2 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=4; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1 1 2 2 0.3084 0 1 1 1 565.33643 1129.66557 1129.66392 1.46 0.00083 0/0 0 0 12122191 HCD 30 MS2 19.10981 227.3 110 31.9533 6600 6600 6591 QEplus033719.raw F4 248.9 154.8 244 206.4 282.1 227.7 284 2.27 1 FALSE 0.003006 0.05869 0.118 -250 15906 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAQEVGER [R].gAQEVGER.[L] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.2551 0 1 1 1 537.7915 1074.57573 1074.5741 1.52 0.00081 0/0 0 0 257243200 HCD 30 MS2 2.518777 445.8 5.483 31.9628 6603 6603 6602 QEplus033719.raw F4 498.1 337.6 448.4 432.8 555.2 402.7 220 2.94 2 FALSE 1.14E-05 0.0005705 0.711 -250 15913 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDRVPPSR [R].qDRVPPSR.[N] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 1 3 3 0.5105 0 1 1 1 395.22986 1183.67502 1183.67449 0.45 0.00018 0/0 0 0 39175456 HCD 30 MS2 16.93924 279.8 28.765 31.9651 6604 6604 6602 QEplus033719.raw F4 353.5 216.5 319.4 324.3 197 268.2 240 2.86 3 FALSE 5.44E-05 0.002136 0.592 -250 15921 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGSPGAEGSPGR [R].eGSPGAEGSPGR.[D] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087; Q99LL6 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4; Col1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1 0 2 2 0.7095 0 1 1 1 665.33423 1329.66118 1329.65962 1.17 0.00078 0/0 0 0 69982608 HCD 30 MS2 2.219387 354.7 31.066 31.9673 6605 6605 6602 QEplus033719.raw F4 293.7 386 468.1 134.9 456.9 388.7 83 3.27 1 FALSE 1.14E-05 1.47E-05 1.016 -250 15927 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGDGGSLGSGSR [R].sGDGGSLGSGSR.[S] N-Term(TMT6plex) 3 Q4VAA2 Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3 PE=1 SV=2 Q4VAA2-2; Q4VAA2; A0A087WNP6 Isoform 2 of Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3; Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3 PE=1 SV=2; Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3 PE=1 SV=1 0 2 2 0.7072 0 1 1 1 633.3186 1265.62993 1265.62832 1.27 0.0008 0/0 0 0 24762566 HCD 30 MS2 2.055406 552.3 87.468 31.9696 6606 6606 6602 QEplus033719.raw F4 593 397.6 595.1 497.1 605.8 625.5 121 3.62 1 FALSE 1.14E-05 2.47E-07 1.353 -250 15935 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEEGVR [R].eAEEGVR.[R] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.316 0 1 1 1 509.77252 1018.53777 1018.53665 1.09 0.00056 0/0 0 0 24350582 HCD 30 MS2 10.71734 648.9 47.933 31.9719 6607 6607 6602 QEplus033719.raw F4 779.7 509 650.3 618.1 769.5 566.8 232 2.69 2 FALSE 0.0006574 0.009981 0.405 -250 15949 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLHEVGR [K].rLHEVGR.[T] N-Term(TMT6plex) 2 Q3U5H8 Heme oxygenase (biliverdin-producing) (Fragment) OS=Mus musculus OX=10090 GN=Hmox1 PE=2 SV=1 Q3U5H8; Q3U5U6 Heme oxygenase (biliverdin-producing) (Fragment) OS=Mus musculus OX=10090 GN=Hmox1 PE=2 SV=1; Heme oxygenase OS=Mus musculus OX=10090 GN=Hmox1 PE=1 SV=1 1 3 3 0.2972 0 1 1 1 365.89142 1095.6597 1095.65844 1.15 0.00042 0/0 0 0 9168983 HCD 30 MS2 40.03319 188.4 76.109 31.9764 6609 6609 6602 QEplus033719.raw F4 230.9 126.4 193.5 188.8 215.7 175.4 72 2.86 1 FALSE 0.001395 0.01996 0.281 -250 15959 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSRPIDTSR [K].gSRPIDTSR.[L] N-Term(TMT6plex) 8 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 Q6NZJ6-2; E9Q9E1; Q6PD42; E9PVC5; E9PVC6; A0A0J9YUS5; Q6NZJ6; Q8K0J8 Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 0 3 3 0.5646 0 1 1 1 406.56519 1217.681 1217.67996 0.85 0.00035 0/0 0 0 5765423 HCD 30 MS2 29.12146 340.2 110 31.9814 6611 6611 6602 QEplus033719.raw F4 275.9 283.8 424.2 251.7 375.7 429.8 311 2.94 1 FALSE 5.44E-05 0.001768 0.61 -250 15968 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSANTQVVR [R].rSANTQVVR.[E] N-Term(TMT6plex) 6 Q8BQW4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Arhgap1 PE=2 SV=1 Q8BQW4; A0A2X0SSA9; Q5FWK3; Q91Z04; Q8C5A0; A2AH25 Uncharacterized protein OS=Mus musculus OX=10090 GN=Arhgap1 PE=2 SV=1; ARHGAP1 (Fragment) OS=Mus musculus OX=10090 GN=ARHGAP1 PE=4 SV=1; Rho GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Arhgap1 PE=1 SV=1; Arhgap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Arhgap1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Arhgap1 PE=2 SV=1; Rho GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Arhgap1 PE=1 SV=1 1 3 3 0.5709 0 1 1 1 420.58441 1259.73868 1259.73815 0.42 0.00018 0/0 0 0 6944242 HCD 30 MS2 37.21676 219.9 110 31.9912 6614 6614 6613 QEplus033719.raw F4 306.4 148.3 234.4 176.1 217.9 236.1 418 4.94 1 FALSE 1.14E-05 3.29E-06 1.139 -250 15973 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HNQRPTFR [K].hNQRPTFR.[Q] N-Term(TMT6plex) 7 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; B7FAV1; F6XC15; B9EKP5; Q8BTM8-2; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Isoform 2 of Filamin-A OS=Mus musculus OX=10090 GN=Flna; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.5464 0 1 1 1 642.86035 1284.71343 1284.71227 0.9 0.00058 0/0 0 0 5262902.5 HCD 30 MS2 13.06663 133.4 110 31.9937 6615 6615 6613 QEplus033719.raw F4 136.2 122.4 158.3 108.6 140.9 133.8 263 1.94 1 FALSE 0.007592 0.1243 -0.05 -250 15985 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTEGQQER [K].vTEGQQER.[L] N-Term(TMT6plex) 3 Q5EBP9 Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 Q62318-2; Q5EBP9; Q3UDN8 Isoform 2 of Transcription intermediary factor 1-beta OS=Mus musculus OX=10090 GN=Trim28; Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 0 2 2 0.6008 0 1 1 1 588.31531 1175.62334 1175.62178 1.32 0.00078 0/0 0 0 22356734 HCD 30 MS2 2.345185 588.8 99.146 31.9986 6617 6617 6613 QEplus033719.raw F4 704.2 553.4 650.8 439 728.4 457 228 2.43 1 FALSE 1.14E-05 0.0003498 0.753 -250 15998 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTLNSSSR [R].qTLNSSSR.[K] N-Term(TMT6plex) 3 A0A0R4J0X8 Rho guanine nucleotide exchange factor 7 OS=Mus musculus OX=10090 GN=Arhgef7 PE=1 SV=1 Q9ES28-4; Q9ES28-2; A0A0R4J0X8 Isoform D of Rho guanine nucleotide exchange factor 7 OS=Mus musculus OX=10090 GN=Arhgef7; Isoform A of Rho guanine nucleotide exchange factor 7 OS=Mus musculus OX=10090 GN=Arhgef7; Rho guanine nucleotide exchange factor 7 OS=Mus musculus OX=10090 GN=Arhgef7 PE=1 SV=1 0 2 2 0.572 0 1 1 1 561.30975 1121.61223 1121.61122 0.9 0.00051 0/0 0 0 6025814.5 HCD 30 MS2 34.35509 293.8 110 32.0033 6619 6619 6613 QEplus033719.raw F4 370.2 215.3 290.5 278.3 313.1 295.6 237 2.64 1 FALSE 5.44E-05 0.002315 0.584 -250 16035 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVCAQR [R].eVcAQR.[D] N-Term(TMT6plex); C3(Carbamidomethyl) 4 A0A6I8MWZ0 Peptidylprolyl isomerase (Fragment) OS=Mus musculus OX=10090 GN=Fkbp15 PE=1 SV=1 Q6P9Q6-2; A0A6I8MWZ0; B2RQ18; Q6P9Q6 Isoform B of FK506-binding protein 15 OS=Mus musculus OX=10090 GN=Fkbp15; Peptidylprolyl isomerase (Fragment) OS=Mus musculus OX=10090 GN=Fkbp15 PE=1 SV=1; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp15 PE=2 SV=1; FK506-binding protein 15 OS=Mus musculus OX=10090 GN=Fkbp15 PE=1 SV=2 0 2 2 0.2293 0 1 1 1 496.26404 991.5208 991.51923 1.58 0.00078 0/0 0 0 1973600.25 HCD 30 MS2 43.96939 217.1 110 32.0231 6626 6626 6624 QEplus033719.raw F4 313.9 158.5 253.2 177.1 203 196.9 186 2.05 1 FALSE 0.003928 0.07342 0.079 -250 16049 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGSPGAEGSPGR [R].eGSPGAEGSPGR.[D] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087; Q99LL6 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4; Col1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1 0 3 3 0.7616 0 1 1 1 443.89182 1329.66089 1329.65962 0.95 0.00042 0/0 0 0 15258799 HCD 30 MS2 15.56633 236.2 84.861 32.0301 6629 6629 6624 QEplus033719.raw F4 279.9 203.4 249.9 188.2 250.7 245.3 83 4.74 1 FALSE 1.14E-05 1.17E-10 1.984 -250 16054 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQYTTGR [R].sQYTTGR.[G] N-Term(TMT6plex) 3 Q3UDI8 DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=2 SV=1 Q3UDI8; Q61881; Q3V122 DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=2 SV=1; DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=1 SV=1; DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=2 SV=1 0 2 2 0.6535 0 1 1 1 521.28101 1041.55474 1041.55264 2.01 0.00105 0/0 0 0 11530210 HCD 30 MS2 32.49306 654.8 110 32.035 6631 6631 6624 QEplus033719.raw F4 687.1 671 590.8 408.3 1126.8 444.6 135 2.54 1 FALSE 0.001421 0.02039 0.278 -250 16061 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASNYQSTTR [R].aSNYQSTTR.[V] N-Term(TMT6plex) 2 Q8BTU1 Cilia- and flagella-associated protein 20 OS=Mus musculus OX=10090 GN=Cfap20 PE=1 SV=1 Q8BTU1-2; Q8BTU1 Isoform 2 of Cilia- and flagella-associated protein 20 OS=Mus musculus OX=10090 GN=Cfap20; Cilia- and flagella-associated protein 20 OS=Mus musculus OX=10090 GN=Cfap20 PE=1 SV=1 0 2 2 0.7276 0 1 1 1 628.82593 1256.64458 1256.64324 1.06 0.00067 0/0 0 0 6266720 HCD 30 MS2 0 222.1 110 32.0375 6632 6632 6624 QEplus033719.raw F4 185.3 238.3 254.6 156.9 322.1 175.6 130 2.9 1 FALSE 1.14E-05 3.80E-05 0.937 -250 16069 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAADDYNR [K].sAADDYNR.[I] N-Term(TMT6plex) 3 Q6P8X1 Sorting nexin-6 OS=Mus musculus OX=10090 GN=Snx6 PE=1 SV=2 Q8R0Z4; A0A1W2P701; Q6P8X1 Snx6 protein OS=Mus musculus OX=10090 GN=Snx6 PE=2 SV=1; Sorting nexin-6 OS=Mus musculus OX=10090 GN=Snx6 PE=1 SV=1; Sorting nexin-6 OS=Mus musculus OX=10090 GN=Snx6 PE=1 SV=2 0 2 2 0.7286 0 1 1 1 570.77844 1140.54961 1140.54828 1.16 0.00066 0/0 0 0 5671944.5 HCD 30 MS2 0 404.7 110 32.04 6633 6633 6624 QEplus033719.raw F4 415.7 398.6 456.2 337.5 469.5 350.8 56 2.69 1 FALSE 1.14E-05 0.0003063 0.764 -250 16077 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLQEAHR [K].qLQEAHR.[D] N-Term(TMT6plex) 4 E9Q6R7 Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 O08614; A0A1W2P7C0; Q61636; E9Q6R7 Cytoskeletal protein OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1; G-utrophin (Predicted protein) OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1; Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 0 3 3 0.4323 0 1 1 1 370.87918 1110.62299 1110.62172 1.14 0.00042 0/0 0 0 5393039 HCD 30 MS2 37.04959 187.6 110 32.0425 6634 6634 6624 QEplus033719.raw F4 194.9 153.6 201.6 172.2 212.7 190.6 166 3.1 1 FALSE 1.14E-05 0.00057 0.711 -250 16085 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGSQGQCTQVR [R].tGSQGQcTQVR.[V] N-Term(TMT6plex); C7(Carbamidomethyl) 2 G3UYV7 40S ribosomal protein S28 (Fragment) OS=Mus musculus OX=10090 GN=Rps28 PE=1 SV=1 G3UYV7; P62858 40S ribosomal protein S28 (Fragment) OS=Mus musculus OX=10090 GN=Rps28 PE=1 SV=1; 40S ribosomal protein S28 OS=Mus musculus OX=10090 GN=Rps28 PE=1 SV=1 0 2 2 0.6291 0 1 1 1 725.86792 1450.72856 1450.72699 1.08 0.00079 0/0 0 0 6108517 HCD 30 MS2 4.580814 171.3 110 32.0498 6636 6636 6635 QEplus033719.raw F4 174.9 137.3 179 131.8 201.7 203.1 175 3.64 1 FALSE 1.14E-05 4.54E-10 1.872 -250 16099 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGTSPGTPNR [R].aGTSPGTPNR.[I] N-Term(TMT6plex) 3 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 Q3U454; A0A0R4J0I9; Q91ZX7 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lrp1 PE=2 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 0 2 2 0.6548 0 1 1 1 593.82312 1186.63896 1186.63777 1.01 0.0006 0/0 0 0 8036759 HCD 30 MS2 5.878647 343.8 110 32.0573 6639 6639 6635 QEplus033719.raw F4 308.3 337.6 395.1 279.6 417.7 324.5 190 2.81 1 FALSE 1.14E-05 0.0004882 0.724 -250 16114 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGGICDCQTSR [K].hGGIcDcQTSR.[D] N-Term(TMT6plex); C5(Carbamidomethyl); C7(Carbamidomethyl) 6 Q3TTM6 Alpha-MPP OS=Mus musculus OX=10090 GN=Pmpca PE=2 SV=1 Q8BK51; Q3TTM6; Q3TY06; Q9DC61; Q3UDE0; A2AIW9 Alpha-MPP OS=Mus musculus OX=10090 GN=Pmpca PE=2 SV=1; Alpha-MPP OS=Mus musculus OX=10090 GN=Pmpca PE=2 SV=1; Alpha-MPP (Fragment) OS=Mus musculus OX=10090 GN=Pmpca PE=2 SV=1; Mitochondrial-processing peptidase subunit alpha OS=Mus musculus OX=10090 GN=Pmpca PE=1 SV=1; Alpha-MPP (Fragment) OS=Mus musculus OX=10090 GN=Pmpca PE=2 SV=1; Alpha-MPP OS=Mus musculus OX=10090 GN=Pmpca PE=1 SV=1 0 3 3 0.8767 0 1 1 1 507.23676 1519.69571 1519.69431 0.92 0.00047 0/0 0 0 5989356.5 HCD 30 MS2 34.61313 172.4 110 32.0623 6641 6641 6635 QEplus033719.raw F4 208.6 128.8 171.2 190.9 185.5 149.6 34 5.11 1 FALSE 1.14E-05 7.14E-10 1.835 -250 16120 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRNVATPR [K].dRNVATPR.[D] N-Term(TMT6plex) 11 Q3UYH9; Q9WUB3 "Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1;Glycogen phosphorylase, muscle form OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=3" Q3UYH9; Q9ET01; E9PUM3; Q3TJQ7; Q8BLV0; Q3V3U0; Q9WUB3; Q3TFQ8; Q91WP9; Q3UGT5; Q8CI94 "Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Glycogen phosphorylase, liver form OS=Mus musculus OX=10090 GN=Pygl PE=1 SV=4; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygl PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Pygl PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Glycogen phosphorylase, muscle form OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=3; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygl PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Glycogen phosphorylase, brain form OS=Mus musculus OX=10090 GN=Pygb PE=1 SV=3" 1 2 2 0.4573 0 1 1 1 579.33331 1157.65935 1157.65884 0.44 0.00026 0/0 0 0 5636914.5 HCD 30 MS2 11.42653 143.7 110 32.0649 6642 6642 6635 QEplus033719.raw F4 178.8 75.8 121.2 190.3 121.7 174.6 195 2.34 2 FALSE 0.007405 0.1198 -0.041 -250 16125 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSSDNISR [K].tSSDNISR.[M] N-Term(TMT6plex) 1 Q8K2Q0 COMM domain-containing protein 9 OS=Mus musculus OX=10090 GN=Commd9 PE=1 SV=3 Q8K2Q0 COMM domain-containing protein 9 OS=Mus musculus OX=10090 GN=Commd9 PE=1 SV=3 0 2 2 0.5382 0 1 1 1 554.79303 1108.57878 1108.57958 -0.72 -0.0004 0/0 0 0 5105749 HCD 30 MS2 31.1992 444.3 110 32.0674 6643 6643 6635 QEplus033719.raw F4 567.1 333.6 472.7 405.9 504.3 382.4 173 2.75 1 FALSE 1.14E-05 7.25E-05 0.884 -250 16134 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSTIENTRR [R].nSTIENTRR.[H] N-Term(TMT6plex) 6 Q0VER3 Mothers against decapentaplegic homolog OS=Mus musculus OX=10090 GN=Smad9 PE=2 SV=1 P70340; Q9CRR7; P97454; Q0VER3; Q8C3Y6; Q3UVC6 Mothers against decapentaplegic homolog 1 OS=Mus musculus OX=10090 GN=Smad1 PE=1 SV=2; Mothers against decapentaplegic homolog (Fragment) OS=Mus musculus OX=10090 GN=Smad5 PE=2 SV=1; Mothers against decapentaplegic homolog 5 OS=Mus musculus OX=10090 GN=Smad5 PE=1 SV=2; Mothers against decapentaplegic homolog OS=Mus musculus OX=10090 GN=Smad9 PE=2 SV=1; Mothers against decapentaplegic homolog OS=Mus musculus OX=10090 GN=Smad1 PE=1 SV=1; Mothers against decapentaplegic homolog OS=Mus musculus OX=10090 GN=Smad9 PE=2 SV=1 1 3 3 0.5505 0 1 1 1 440.57944 1319.72376 1319.72289 0.66 0.00029 0/0 0 0 3384350.5 HCD 30 MS2 15.72576 246.2 110 32.0699 6644 6644 6635 QEplus033719.raw F4 254.3 210.1 278.5 196.2 311.3 226.7 372 4.16 1 FALSE 1.14E-05 1.34E-06 1.213 -250 16147 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REEEIR [KR].rEEEIR.[EK] N-Term(TMT6plex) 2 Q6A049; B2RT41 "MKIAA0546 protein (Fragment) OS=Mus musculus OX=10090 GN=Zfc3h1 PE=2 SV=1; Zinc finger, C3H1-type-containing OS=Mus musculus OX=10090 GN=Zfc3h1 PE=1 SV=1" 1 3 3 0.1577 0 1 1 3 354.20233 1060.59244 1060.59484 -2.26 -0.0008 0/0 0 0 9330414 HCD 30 MS2 35.75553 306.2 82.919 32.0797 6647 6647 6646 QEplus033719.raw F4 379 195.1 277.6 228.4 501.1 255.9 421 2.41 1 FALSE 0.0009075 0.01247 0.366 -250 16148 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REEELR [KR].rEEELR.[EK] N-Term(TMT6plex) 9 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1; Q9QXN3; Q3V203; Q6A0B9; Q9QXN3-2; A0A0B4J1F9; Q3UJV0; Q3UM46 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; Activating signal cointegrator 1 OS=Mus musculus OX=10090 GN=Trip4 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tchh PE=2 SV=1; MKIAA0139 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; Isoform 2 of Activating signal cointegrator 1 OS=Mus musculus OX=10090 GN=Trip4; Trichohyalin OS=Mus musculus OX=10090 GN=Tchh PE=1 SV=1; ASCH domain-containing protein OS=Mus musculus OX=10090 GN=Trip4 PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.1577 0 1 2 2 354.20233 1060.59244 1060.59484 -2.26 -0.0008 0/0 0 0 9330414 HCD 30 MS2 35.75553 306.2 82.919 32.0797 6647 6647 6646 QEplus033719.raw F4 379 195.1 277.6 228.4 501.1 255.9 421 2.41 1 FALSE 0.0009075 0.01247 0.366 -250 16168 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQPAEPR [R].tQPAEPR.[A] N-Term(TMT6plex) 2 Q3TJX6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Utp18 PE=2 SV=1 Q3TJX6; Q5SSI6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Utp18 PE=2 SV=1; U3 small nucleolar RNA-associated protein 18 homolog OS=Mus musculus OX=10090 GN=Utp18 PE=1 SV=1 0 2 2 0.5307 0 1 1 1 514.29071 1027.57414 1027.57337 0.75 0.00038 0/0 0 0 12149868 HCD 30 MS2 21.8936 573.4 110 32.087 6650 6650 6646 QEplus033719.raw F4 642.2 447.3 618.4 463.9 701.1 567.6 96 2.28 1 FALSE 0.003583 0.06856 0.091 -250 16172 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSRPIDTSR [K].gSRPIDTSR.[L] N-Term(TMT6plex) 8 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 Q6NZJ6-2; E9Q9E1; Q6PD42; E9PVC5; E9PVC6; A0A0J9YUS5; Q6NZJ6; Q8K0J8 Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 0 2 2 0.3907 0 1 1 1 609.34436 1217.68144 1217.67996 1.21 0.00074 0/0 0 0 8786046 HCD 30 MS2 16.79772 145.3 110 32.0895 6651 6651 6646 QEplus033719.raw F4 125.9 117.6 173.8 118.7 166 170 322 2.15 1 FALSE 0.001108 0.01454 0.338 -250 16188 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTADVTR [R].gTADVTR.[D] N-Term(TMT6plex) 4 P17809 "Solute carrier family 2, facilitated glucose transporter member 1 OS=Mus musculus OX=10090 GN=Slc2a1 PE=1 SV=4" P17809; Q3TD17; Q3U2J2; Q8BTM5 "Solute carrier family 2, facilitated glucose transporter member 1 OS=Mus musculus OX=10090 GN=Slc2a1 PE=1 SV=4; Glucose transporter type 1, erythrocyte/brain OS=Mus musculus OX=10090 GN=Slc2a1 PE=2 SV=1; Glucose transporter type 1, erythrocyte/brain OS=Mus musculus OX=10090 GN=Slc2a1 PE=2 SV=1; MFS domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Slc2a1 PE=2 SV=1" 0 2 2 0.1773 0 1 1 2 474.76962 948.53197 948.53118 0.84 0.0004 0/0 0 0 6763864.5 HCD 30 MS2 21.0964 556.8 110 32.0945 6653 6653 6646 QEplus033719.raw F4 739.5 375.9 580.8 550 573.7 521.1 158 2.2 1 FALSE 0.0002419 0.004962 0.502 -250 16192 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HCEDVNECETR [K].hcEDVNEcETR.[R] N-Term(TMT6plex); C2(Carbamidomethyl); C8(Carbamidomethyl) 3 P37889 Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 P37889-2; Q99K58; P37889 Isoform 2 of Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2; Fibulin 2 OS=Mus musculus OX=10090 GN=Fbln2 PE=2 SV=1; Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 0 3 3 0.9194 0 1 1 1 559.91083 1677.71793 1677.71583 1.25 0.0007 0/0 0 0 6362009.5 HCD 30 MS2 30.52409 275.5 110 32.0969 6654 6654 6646 QEplus033719.raw F4 409.6 175.2 247.8 242.1 334.1 244.4 6 5.09 1 FALSE 1.14E-05 6.84E-08 1.459 -250 16206 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YQDHEEEDDGDSDEDSHTHR [R].yQDHEEEDDGDSDEDSHTHR.[V] N-Term(TMT6plex) 3 Q9QZV4 Histidine-rich Ca2+ binding protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1 Q9QZV4; G5E8J6; B9EIW1 Histidine-rich Ca2+ binding protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1; Histidine-rich calcium-binding protein OS=Mus musculus OX=10090 GN=Hrc PE=1 SV=1; Hrc protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1 0 4 4 1 0 1 1 1 662.01776 2645.04922 2645.04575 1.31 0.00087 0/0 0 0 2183175.75 HCD 30 MS2 0 26.7 110 32.1093 6658 6658 6657 QEplus033719.raw F4 30.6 9.7 23.5 54.3 15.3 26.9 1 9.26 1 FALSE 1.14E-05 6.31E-16 4.441 -250 16211 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGHEEQQR [K].lGHEEQQR.[R] N-Term(TMT6plex) 3 Q3TE95 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rcn2 PE=2 SV=1 Q3TE95; Q8BP39; Q8BP92 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rcn2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rcn2 PE=2 SV=1; Reticulocalbin-2 OS=Mus musculus OX=10090 GN=Rcn2 PE=1 SV=1 0 3 3 0.6226 0 1 1 1 409.22104 1225.64856 1225.64866 -0.08 -0.00003 0/0 0 0 30082136 HCD 30 MS2 23.42292 263 47.339 32.114 6660 6660 6657 QEplus033719.raw F4 406 158.5 250.9 288 230.5 244.2 193 4.16 1 FALSE 1.14E-05 3.36E-07 1.327 -250 16221 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHYNCEHSK [K].qHYNcEHSk.[I] N-Term(TMT6plex); C5(Carbamidomethyl); K9(TMT6plex) 7 Q3TWG9; A0A140LHR4 Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1;Serpin H1 (Fragment) OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=1 Q8BVU9; Q3TJK3; Q3TWG9; Q8BV87; Q3TMD2; A0A140LHR4; P19324 Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Serpin H1 (Fragment) OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=1; Serpin H1 OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=3 0 4 4 0.6946 0 1 1 1 415.96234 1660.82754 1660.82659 0.57 0.00024 0/0 0 0 18586372 HCD 30 MS2 34.51369 449.1 63.609 32.1163 6661 6661 6657 QEplus033719.raw F4 922.9 251.7 405.7 444.8 356.7 312.7 175 3.34 2 FALSE 1.14E-05 3.01E-06 1.146 -250 16242 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETRPGSGQPVR [R].eTRPGSGQPVR.[F] N-Term(TMT6plex) 6 Q8VCR7 Protein ABHD14B OS=Mus musculus OX=10090 GN=Abhd14b PE=1 SV=1 A0A087WPF8; Q8VCR7; A0A087WP24; E9QN99; A0A087WRJ2; A0A087WSR2 Protein ABHD14B (Fragment) OS=Mus musculus OX=10090 GN=Abhd14b PE=1 SV=1; Protein ABHD14B OS=Mus musculus OX=10090 GN=Abhd14b PE=1 SV=1; Protein ABHD14B (Fragment) OS=Mus musculus OX=10090 GN=Abhd14b PE=1 SV=1; Protein ABHD14B OS=Mus musculus OX=10090 GN=Abhd14b PE=1 SV=1; Protein ABHD14B (Fragment) OS=Mus musculus OX=10090 GN=Abhd14b PE=1 SV=1; Protein ABHD14B (Fragment) OS=Mus musculus OX=10090 GN=Abhd14b PE=1 SV=1 0 3 3 0.6061 0 1 1 1 471.59912 1412.78281 1412.78074 1.46 0.00069 0/0 0 0 6011667 HCD 30 MS2 17.117 209.7 110 32.1235 6664 6664 6657 QEplus033719.raw F4 209.9 203.3 246 154.6 239.4 205 312 3.96 1 FALSE 1.14E-05 3.11E-05 0.954 -250 16258 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQATQYQR [K].sQATQYQR.[A] N-Term(TMT6plex) 5 G3XA09 Apoptotic protease-activating factor 1 OS=Mus musculus OX=10090 GN=Apaf1 PE=1 SV=1 G3XA09; Q80VR5; O88879-2; Q5DU30; O88879 Apoptotic protease-activating factor 1 OS=Mus musculus OX=10090 GN=Apaf1 PE=1 SV=1; Apaf1 protein OS=Mus musculus OX=10090 GN=Apaf1 PE=1 SV=1; Isoform 2 of Apoptotic protease-activating factor 1 OS=Mus musculus OX=10090 GN=Apaf1; Apoptotic protease-activating factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Apaf1 PE=2 SV=1; Apoptotic protease-activating factor 1 OS=Mus musculus OX=10090 GN=Apaf1 PE=1 SV=3 0 2 2 0.6485 0 1 1 1 605.82312 1210.63896 1210.63777 0.99 0.0006 0/0 0 0 3117842.5 HCD 30 MS2 18.1846 167 110 32.131 6667 6667 6657 QEplus033719.raw F4 168.6 161.9 181.6 131.4 192.7 166 228 2.93 1 FALSE 1.14E-05 6.52E-05 0.893 -250 16267 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQQEVADR [K].eQQEVADR.[L] N-Term(TMT6plex) 2 Q80YU9 Retinoblastoma binding protein 9 OS=Mus musculus OX=10090 GN=Rbbp9 PE=2 SV=1 Q80YU9; A2AN96 Retinoblastoma binding protein 9 OS=Mus musculus OX=10090 GN=Rbbp9 PE=2 SV=1; Retinoblastoma binding protein 9 OS=Mus musculus OX=10090 GN=Rbbp9 PE=1 SV=1 0 2 2 0.4748 0 1 1 1 602.31305 1203.61882 1203.6167 1.77 0.00106 0/0 0 0 2168520 HCD 30 MS2 0 148.1 110 32.1384 6669 6669 6668 QEplus033719.raw F4 164.1 112.8 148.2 153.6 150.5 159.4 130 3.18 1 FALSE 1.14E-05 7.85E-05 0.877 -250 16274 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDYAAGQSHR [R].eDYAAGQSHR.[N] N-Term(TMT6plex) 3 P97868 E3 ubiquitin-protein ligase RBBP6 OS=Mus musculus OX=10090 GN=Rbbp6 PE=1 SV=5 P97868; P97868-2; A0A338P6W1 E3 ubiquitin-protein ligase RBBP6 OS=Mus musculus OX=10090 GN=Rbbp6 PE=1 SV=5; Isoform 2 of E3 ubiquitin-protein ligase RBBP6 OS=Mus musculus OX=10090 GN=Rbbp6; E3 ubiquitin-protein ligase RBBP6 (Fragment) OS=Mus musculus OX=10090 GN=Rbbp6 PE=1 SV=1 0 3 3 0.6144 0 1 1 1 454.89182 1362.66089 1362.65996 0.69 0.00031 0/0 0 0 1173166.875 HCD 30 MS2 63.92765 168 110 32.1409 6670 6670 6668 QEplus033719.raw F4 196.4 102 216.2 146.8 204.4 142.2 77 3.06 1 FALSE 1.14E-05 2.25E-05 0.98 -250 16280 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSTPSGPVR [K].rSTPSGPVR.[S] N-Term(TMT6plex) 2 Q91VM5 "RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" A0A2I3BRL8; Q91VM5 "Predicted gene 7324 OS=Mus musculus OX=10090 GN=Gm7324 PE=4 SV=1; RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" 1 3 3 0.5475 0 1 1 1 395.90158 1185.69019 1185.69014 0.05 0.00002 0/0 0 0 61543148 HCD 30 MS2 25.7042 215.8 15.572 32.1431 6671 6671 6668 QEplus033719.raw F4 267.7 180.9 242.2 206.7 196.9 200.1 314 3.58 1 FALSE 0.0001813 0.003992 0.527 -250 16284 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVLEGHDR [K].hVLEGHDR.[G] N-Term(TMT6plex) 4 Q8CIE6 Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2 Q63ZW9; Q8CIE6; F8WHL2; Q8BTF0 Copa protein (Fragment) OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1 0 3 3 0.6812 0 1 1 1 397.88614 1191.64386 1191.64319 0.57 0.00023 0/0 0 0 37693120 HCD 30 MS2 45.73798 216.8 29.835 32.1454 6672 6672 6668 QEplus033719.raw F4 353.7 108.7 208.2 185.2 290.6 154.4 234 3.67 1 FALSE 1.14E-05 6.45E-06 1.084 -250 16291 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAPPPTR [R].dAPPPTR.[A] N-Term(TMT6plex) 8 A2RS68 U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 A0A1B0GRR8; A0A1B0GRV8; A0A1B0GR69; A2RS68; Q9CR32; Q7TT81; A0A1B0GR44; Q6ZWP0 U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=3; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 0 2 2 0.5714 0 1 1 1 491.77991 982.55254 982.55191 0.64 0.00031 0/0 0 0 10608750 HCD 30 MS2 18.15086 499.9 110 32.1479 6673 6673 6668 QEplus033719.raw F4 554.6 427.1 527 418 580.5 492.2 51 2.24 1 FALSE 0.005628 0.09469 0.021 -250 16307 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRNDLDDPER [R].rRNDLDDPER.[G] N-Term(TMT6plex) 2 B2RSV4 "Splicing factor 3b, subunit 3 OS=Mus musculus OX=10090 GN=Sf3b3 PE=2 SV=1" Q921M3-2; B2RSV4 "Isoform 2 of Splicing factor 3B subunit 3 OS=Mus musculus OX=10090 GN=Sf3b3; Splicing factor 3b, subunit 3 OS=Mus musculus OX=10090 GN=Sf3b3 PE=2 SV=1" 2 4 4 0.4492 0 1 1 1 379.45236 1514.78762 1514.78728 0.22 0.00008 0/0 0 0 6901281 HCD 30 MS2 37.10021 165.8 110 32.1528 6675 6675 6668 QEplus033719.raw F4 191 141.2 164.1 129.8 202.5 166 207 3.74 1 FALSE 1.14E-05 0.0002238 0.79 -250 16310 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVLEGHDR [K].hVLEGHDR.[G] N-Term(TMT6plex) 4 Q8CIE6 Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2 Q63ZW9; Q8CIE6; F8WHL2; Q8BTF0 Copa protein (Fragment) OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1 0 2 2 0.6021 0 1 1 1 596.32666 1191.64604 1191.64319 2.4 0.00143 0/0 0 0 4974104 HCD 30 MS2 11.31934 295.5 110 32.1554 6676 6676 6668 QEplus033719.raw F4 349.6 228.3 273.7 264.2 391.4 265.5 282 2.89 1 FALSE 1.14E-05 8.36E-05 0.872 -250 16330 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVQADQERER [K].aVQADQERER.[Q] N-Term(TMT6plex) 1 Q922Q8 Leucine-rich repeat-containing protein 59 OS=Mus musculus OX=10090 GN=Lrrc59 PE=1 SV=1 Q922Q8 Leucine-rich repeat-containing protein 59 OS=Mus musculus OX=10090 GN=Lrrc59 PE=1 SV=1 1 3 3 0.6448 0 1 1 1 477.58997 1430.75534 1430.75492 0.3 0.00014 0/0 0 0 3651253.75 HCD 30 MS2 20.41591 214.3 110 32.1677 6680 6680 6679 QEplus033719.raw F4 259.1 183.3 229.9 159.1 256.2 198.3 259 3.66 1 FALSE 1.14E-05 1.12E-06 1.228 -250 16341 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGDGGSLGSGSR [R].sGDGGSLGSGSR.[S] N-Term(TMT6plex) 3 Q4VAA2 Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3 PE=1 SV=2 Q4VAA2-2; Q4VAA2; A0A087WNP6 Isoform 2 of Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3; Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3 PE=1 SV=2; Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3 PE=1 SV=1 0 2 2 0.7066 0 1 1 1 633.32257 1265.63786 1265.62832 7.54 0.00477 0/0 0 0 37400076 HCD 30 MS2 3.342778 398.1 50.617 32.1725 6682 6682 6679 QEplus033719.raw F4 410.2 334.6 397.7 303.5 566.4 375.9 141 2.59 1 FALSE 1.14E-05 0.0007683 0.685 -250 16374 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYEEDGSR [K].eYEEDGSR.[A] N-Term(TMT6plex) 2 Q8R5C5 Beta-centractin OS=Mus musculus OX=10090 GN=Actr1b PE=1 SV=1 Q8R1B2; Q8R5C5 Actr1b protein (Fragment) OS=Mus musculus OX=10090 GN=Actr1b PE=2 SV=1; Beta-centractin OS=Mus musculus OX=10090 GN=Actr1b PE=1 SV=1 0 2 2 0.6634 0 1 1 1 607.28058 1213.55388 1213.55343 0.37 0.00023 0/0 0 0 10938023 HCD 30 MS2 9.242689 500.8 110 32.1841 6687 6687 6679 QEplus033719.raw F4 520.3 414.6 494.2 429.1 682.9 463.8 25 3.03 1 FALSE 1.14E-05 0.000831 0.678 -250 16391 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNDSSVPR [R].sNDSSVPR.[N] N-Term(TMT6plex) 1 Q8BRF7 Sec1 family domain-containing protein 1 OS=Mus musculus OX=10090 GN=Scfd1 PE=1 SV=1 Q8BRF7 Sec1 family domain-containing protein 1 OS=Mus musculus OX=10090 GN=Scfd1 PE=1 SV=1 0 2 2 0.6054 0 1 1 1 545.78851 1090.56975 1090.56902 0.67 0.00037 0/0 0 0 3554613 HCD 30 MS2 16.94968 346.5 110 32.1891 6689 6689 6679 QEplus033719.raw F4 386.9 290 362.6 267.3 453.2 319.3 182 2.99 1 FALSE 0.0006294 0.009369 0.415 -250 16397 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HCEDVNECETR [K].hcEDVNEcETR.[R] N-Term(TMT6plex); C2(Carbamidomethyl); C8(Carbamidomethyl) 3 P37889 Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 P37889-2; Q99K58; P37889 Isoform 2 of Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2; Fibulin 2 OS=Mus musculus OX=10090 GN=Fbln2 PE=2 SV=1; Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 0 2 2 0.9523 0 1 1 1 839.36212 1677.71697 1677.71583 0.67 0.00057 0/0 0 0 4533217 HCD 30 MS2 0 125.2 110 32.1964 6691 6691 6690 QEplus033719.raw F4 133.9 95.6 137.6 155.2 92 136.7 6 3.98 1 FALSE 1.14E-05 1.19E-07 1.413 -250 16414 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MATEQGR [K].mATEQGR.[M] N-Term(TMT6plex) 1 P24527 Leukotriene A-4 hydrolase OS=Mus musculus OX=10090 GN=Lta4h PE=1 SV=4 P24527 Leukotriene A-4 hydrolase OS=Mus musculus OX=10090 GN=Lta4h PE=1 SV=4 0 2 2 0.3534 0 1 1 1 511.26898 1021.53069 1021.5298 0.87 0.00045 0/0 0 0 25937458 HCD 30 MS2 13.46545 573.5 56.269 32.2038 6694 6694 6690 QEplus033719.raw F4 669.5 480.1 712 470.5 590.9 517.8 142 2.49 1 FALSE 0.001541 0.02335 0.255 -250 16422 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTSEAATPNR [K].tTSEAATPNR.[Y] N-Term(TMT6plex) 3 Q3UQS9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1 O55124; Q3UQS9; Q14BI5 M-protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1; Myomesin 2 OS=Mus musculus OX=10090 GN=Myom2 PE=1 SV=1 0 2 2 0.6994 0 1 1 1 638.83875 1276.67021 1276.66946 0.59 0.00038 0/0 0 0 6974995.5 HCD 30 MS2 3.335024 292 110 32.2063 6695 6695 6690 QEplus033719.raw F4 389.6 24.9 164.5 671.9 52.4 448.4 248 3.16 1 FALSE 1.14E-05 7.29E-06 1.073 -250 16438 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETGDDYR [R].eTGDDYR.[T] N-Term(TMT6plex) 2 Q9DAR7 m7GpppX diphosphatase OS=Mus musculus OX=10090 GN=Dcps PE=1 SV=1 Q3TBW9; Q9DAR7 DCS-1 OS=Mus musculus OX=10090 GN=Dcps PE=1 SV=1; m7GpppX diphosphatase OS=Mus musculus OX=10090 GN=Dcps PE=1 SV=1 0 2 2 0.5365 0 1 1 1 542.76001 1084.51274 1084.51083 1.76 0.00095 0/0 0 0 3878070.25 HCD 30 MS2 36.81974 379.6 110 32.2138 6698 6698 6690 QEplus033719.raw F4 413.2 370.3 383.1 275.5 508.2 327.1 34 2.33 1 FALSE 0.001117 0.01476 0.336 -250 16451 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQTEVDR [K].aQTEVDR.[L] N-Term(TMT6plex) 9 F8VPM7 ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1 F8VPM7; V9GWT6; Q99MI1-2; V9GXP8; V9GXL1; V9GXF0; V9GXH3; V9GX53; Q99MI1 ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; Isoform 2 of ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1; ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; ELKS/Rab6-interacting/CAST family member 1 (Fragment) OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1 0 2 2 0.3885 0 1 1 1 524.28516 1047.56304 1047.5632 -0.16 -0.00008 0/0 0 0 4116009.25 HCD 30 MS2 38.11523 368.1 110 32.2261 6702 6702 6701 QEplus033719.raw F4 418.1 291 399.1 320 430.9 349.8 202 2.78 1 FALSE 0.0005174 0.008083 0.438 -250 16461 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVETEDNR [K].aVETEDNR.[S] N-Term(TMT6plex) 5 Q6NV99 "HAUS augmin-like complex, subunit 6 OS=Mus musculus OX=10090 GN=Haus6 PE=1 SV=1" Q6NV99; Q6P252; Q69ZG0; Q8CB73; Q8BP50 "HAUS augmin-like complex, subunit 6 OS=Mus musculus OX=10090 GN=Haus6 PE=1 SV=1; 6230416J20Rik protein (Fragment) OS=Mus musculus OX=10090 GN=Haus6 PE=2 SV=1; MKIAA1574 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA1574 PE=4 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Haus6 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Haus6 PE=2 SV=1" 0 2 2 0.2634 0 1 1 1 581.80017 1162.59307 1162.59015 2.51 0.00146 0/0 0 0 1158771.5 HCD 30 MS2 27.77699 157.5 110 32.2286 6703 6703 6701 QEplus033719.raw F4 198.5 124.1 164.2 137 174.7 146.3 132 1.86 1 FALSE 0.0003012 0.006064 0.477 -250 16468 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RADDNATIR [R].rADDNATIR.[V] N-Term(TMT6plex) 2 Q9Z1D1 Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=1 SV=2 Q9Z1D1; Q3THA0 Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=1 SV=2; Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=2 SV=1 1 3 3 0.6491 0 1 1 1 420.90033 1260.68644 1260.68578 0.52 0.00022 0/0 0 0 26870210 HCD 30 MS2 29.05651 373.9 39.634 32.2309 6704 6704 6701 QEplus033719.raw F4 615.4 184.1 419.8 336.6 217.6 469.9 323 4.36 1 FALSE 1.14E-05 1.90E-06 1.185 -250 16475 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNDALR [RK].nNDALR.[Q] N-Term(TMT6plex) 10 Q3TWV0; Q3V2C6; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A0A0A6YWC8; Q3TWV0; Q3V2C6; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; P31001; Q3TFD9; Q5FWJ3 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.133 0 1 1 1 466.2623 931.51732 931.51586 1.57 0.00073 0/0 0 0 17360216 HCD 30 MS2 21.24571 853.8 101.261 32.2332 6705 6705 6701 QEplus033719.raw F4 1529.3 541 844.8 747.9 768.3 691.3 126 2.03 3 FALSE 0.004707 0.08291 0.054 -250 16492 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STSQDVEAR [K].sTSQDVEAR.[Q] N-Term(TMT6plex) 5 Q3TI30 Uncharacterized protein OS=Mus musculus OX=10090 GN=Wdr75 PE=2 SV=1 Q3TI30; Q3TQZ0; Q3THS2; Q9CRF5; Q3U821 Uncharacterized protein OS=Mus musculus OX=10090 GN=Wdr75 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr75 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Wdr75 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr75 PE=2 SV=1; WD repeat-containing protein 75 OS=Mus musculus OX=10090 GN=Wdr75 PE=1 SV=1 0 2 2 0.5065 0 1 1 1 611.31885 1221.63042 1221.62726 2.59 0.00158 0/0 0 0 5632851 HCD 30 MS2 25.62435 315.3 110 32.2381 6707 6707 6701 QEplus033719.raw F4 318.7 296 325 239.3 424.8 287.8 201 3.1 1 FALSE 1.14E-05 2.16E-05 0.984 -250 16504 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RADDNATIR [R].rADDNATIR.[V] N-Term(TMT6plex) 2 Q9Z1D1 Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=1 SV=2 Q9Z1D1; Q3THA0 Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=1 SV=2; Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=2 SV=1 1 2 2 0.619 0 1 1 1 630.84821 1260.68913 1260.68578 2.66 0.00168 0/0 0 0 3268402.25 HCD 30 MS2 20.39435 106.3 110 32.2431 6709 6709 6701 QEplus033719.raw F4 109.9 85.2 115.4 73.6 148.7 105 316 2.94 1 FALSE 1.14E-05 9.38E-07 1.243 -250 16520 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTQEGSSADDTGDTEGR [K].tTQEGSSADDTGDTEGR.[Q] N-Term(TMT6plex) 3 Q61687 Transcriptional regulator ATRX OS=Mus musculus OX=10090 GN=Atrx PE=1 SV=3 Q8BSH0; Q61687; F6RDB7 DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Atrx PE=2 SV=1; Transcriptional regulator ATRX OS=Mus musculus OX=10090 GN=Atrx PE=1 SV=3; DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Atrx PE=1 SV=2 0 2 2 0.7526 0 1 1 1 978.43658 1955.86589 1955.86275 1.61 0.00157 0/0 0 0 1710096.125 HCD 30 MS2 0 33.7 110 32.2555 6713 6713 6712 QEplus033719.raw F4 37 33.6 35.7 24.4 42.3 29.2 21 1.94 1 FALSE 1.14E-05 6.88E-11 2.028 -250 16549 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTEGQQER [K].vTEGQQER.[L] N-Term(TMT6plex) 3 Q5EBP9 Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 Q62318-2; Q5EBP9; Q3UDN8 Isoform 2 of Transcription intermediary factor 1-beta OS=Mus musculus OX=10090 GN=Trim28; Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 0 2 2 0.3226 0 1 1 1 588.31964 1175.63201 1175.62178 8.7 0.00511 0/0 0 0 20466534 HCD 30 MS2 5.892179 500 67.999 32.267 6718 6718 6712 QEplus033719.raw F4 506.6 344.2 437.3 627.4 578.3 506.4 270 1.24 1 FALSE 0.00192 0.03275 0.203 -250 16555 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVQADQER [K].aVQADQER.[E] N-Term(TMT6plex) 1 Q922Q8 Leucine-rich repeat-containing protein 59 OS=Mus musculus OX=10090 GN=Lrrc59 PE=1 SV=1 Q922Q8 Leucine-rich repeat-containing protein 59 OS=Mus musculus OX=10090 GN=Lrrc59 PE=1 SV=1 0 2 2 0.2803 0 1 1 1 573.31024 1145.61321 1145.61122 1.74 0.001 0/0 0 0 20275618 HCD 30 MS2 20.51667 735.2 97.817 32.2693 6719 6719 6712 QEplus033719.raw F4 707.7 633.9 800.8 662.2 914.1 692.2 188 2.89 1 FALSE 1.14E-05 0.0001455 0.826 -250 16574 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LNQNSR [K].lNQNSR.[S] N-Term(TMT6plex) 1 Q3UIG0 Eukaryotic translation initiation factor 3 subunit E OS=Mus musculus OX=10090 GN=Eif3e PE=1 SV=1 Q3UIG0 Eukaryotic translation initiation factor 3 subunit E OS=Mus musculus OX=10090 GN=Eif3e PE=1 SV=1 0 2 2 0.2486 0 1 1 1 480.77469 960.5421 960.54241 -0.32 -0.00015 0/0 0 0 9735018 HCD 30 MS2 50.92878 644.5 93.262 32.2763 6722 6722 6712 QEplus033719.raw F4 870 453.8 747.6 560.6 591.3 643.9 230 1.81 1 FALSE 0.002869 0.05641 0.124 -250 16593 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QASELRR [R].qASELRR.[L] N-Term(TMT6plex) 3 A0A571BDS0 Xin actin-binding repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Xirp1 PE=1 SV=2 A0A571BDS0; O70373; E9QQ93 Xin actin-binding repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Xirp1 PE=1 SV=2; Xin actin-binding repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Xirp1 PE=1 SV=2; Xin actin-binding repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Xirp1 PE=1 SV=2 1 3 3 0.1857 0 1 1 1 363.55099 1088.63843 1088.63737 0.97 0.00035 0/0 0 0 8465320 HCD 30 MS2 28.73488 274.9 110 32.2862 6725 6725 6723 QEplus033719.raw F4 331.4 167.7 280 337.8 213.9 318.6 330 3.5 1 FALSE 0.0001707 0.003918 0.529 -250 16602 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVDPNSR [K].gVDPNSR.[N] N-Term(TMT6plex) 1 P97825 Jupiter microtubule associated homolog 1 OS=Mus musculus OX=10090 GN=Jpt1 PE=1 SV=3 P97825 Jupiter microtubule associated homolog 1 OS=Mus musculus OX=10090 GN=Jpt1 PE=1 SV=3 0 2 2 0.5189 0 1 1 1 487.26776 973.52825 973.52642 1.87 0.00091 0/0 0 0 65688700 HCD 30 MS2 13.96018 550.5 20.814 32.2884 6726 6726 6723 QEplus033719.raw F4 737.8 338.7 557.5 484.7 574.4 609.7 136 2.64 1 FALSE 0.0002719 0.005425 0.491 -250 16610 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YAEEDR [K].yAEEDR.[R] N-Term(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 0 2 2 0.2923 0 1 1 1 506.25162 1011.49596 1011.49446 1.49 0.00075 0/0 0 0 55062716 HCD 30 MS2 9.717951 661.7 25.928 32.2907 6727 6727 6723 QEplus033719.raw F4 675 502.2 699.2 795.8 617.6 680.2 57 2.6 1 FALSE 0.004382 0.07931 0.063 -250 16615 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQIVGSR [R].hQIVGSR.[L] N-Term(TMT6plex) 3 E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; E9PZ16; Q2XQV0 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Perlecan (Fragment) OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1 0 2 2 0.4167 0 1 1 1 513.30713 1025.60698 1025.60534 1.6 0.00082 0/0 0 0 22373880 HCD 30 MS2 23.67863 558.5 46.105 32.2952 6729 6729 6723 QEplus033719.raw F4 576.3 425.8 682.7 666.3 501.7 498.5 87 2.28 1 FALSE 0.001456 0.02096 0.273 -250 16647 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEMQSAGSQR [K].qEMQSAGSQR.[G] N-Term(TMT6plex) 10 Q5FB19 Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1 Q8BG05-2; Q5U3M2; Q58E39; Q6PFA7; Q3UZG3; Q5FB19; V9GX38; A2AL12; Q6P6I7; A2AL13 Isoform 2 of Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3; Hnrpa3 protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Hnrpa3 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Hnrpa3 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Predicted gene 17190 OS=Mus musculus OX=10090 GN=Gm17190 PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1; Hnrpa3 protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A3 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1 0 2 2 0.5194 0 1 1 1 675.83618 1350.66509 1350.66333 1.3 0.00088 0/0 0 0 7099242 HCD 30 MS2 16.75968 185.6 110 32.312 6735 6735 6734 QEplus033719.raw F4 206.1 147.2 178 132.2 280.1 170.2 114 3.6 1 FALSE 1.14E-05 1.87E-06 1.186 -250 16656 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENQPESPSAR [K].eNQPESPSAR.[G] N-Term(TMT6plex) 2 A2BE28 Ribosomal biogenesis protein LAS1L OS=Mus musculus OX=10090 GN=Las1l PE=1 SV=1 A2BE28-2; A2BE28 Isoform 2 of Ribosomal biogenesis protein LAS1L OS=Mus musculus OX=10090 GN=Las1l; Ribosomal biogenesis protein LAS1L OS=Mus musculus OX=10090 GN=Las1l PE=1 SV=1 0 2 2 0.7044 0 1 1 1 672.34216 1343.67705 1343.67527 1.32 0.00089 0/0 0 0 4263159 HCD 30 MS2 0 141.6 110 32.3145 6736 6736 6734 QEplus033719.raw F4 140.7 132.7 161.7 119.8 149.1 145.4 113 3.18 1 FALSE 1.14E-05 7.74E-07 1.259 -250 16679 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMEQNPR [K].sMEQNPR.[R] N-Term(TMT6plex) 2 Q7TPV4 Myb-binding protein 1A OS=Mus musculus OX=10090 GN=Mybbp1a PE=1 SV=2 A0JLT5; Q7TPV4 Mybbp1a protein (Fragment) OS=Mus musculus OX=10090 GN=Mybbp1a PE=2 SV=1; Myb-binding protein 1A OS=Mus musculus OX=10090 GN=Mybbp1a PE=1 SV=2 0 2 2 0.6204 0 1 1 1 545.78143 1090.55559 1090.55126 3.97 0.00217 0/0 0 0 27465536 HCD 30 MS2 7.553611 530.8 32.074 32.3235 6740 6740 6734 QEplus033719.raw F4 527 458.7 559.4 393.3 728.5 517.9 123 2.45 1 FALSE 0.001988 0.03485 0.194 -250 16683 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EREEIAR [K].eREEIAR.[Q] N-Term(TMT6plex) 5 Q91W39 Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1 Q8BX12; Q69ZE0; Q91W39; B7ZC24; B7ZC23 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ncoa5 PE=2 SV=1; MKIAA1637 protein (Fragment) OS=Mus musculus OX=10090 GN=Ncoa5 PE=2 SV=1; Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1; Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1; Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1 1 3 3 0.3077 0 1 1 1 377.88202 1131.6315 1131.63195 -0.4 -0.00015 0/0 0 0 22708644 HCD 30 MS2 30.8232 288.6 38.537 32.3258 6741 6741 6734 QEplus033719.raw F4 273 242.7 311.3 253.3 352.3 299 395 2.99 1 FALSE 0.005276 0.09029 0.033 -250 16690 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERETAIR [K].eRETAIR.[Q] N-Term(TMT6plex) 3 Q3TDG9 t-SNARE coiled-coil homology domain-containing protein OS=Mus musculus OX=10090 GN=Stx12 PE=2 SV=1 Q3TDG9; Q9ER00; Q3TIL5 t-SNARE coiled-coil homology domain-containing protein OS=Mus musculus OX=10090 GN=Stx12 PE=2 SV=1; Syntaxin-12 OS=Mus musculus OX=10090 GN=Stx12 PE=1 SV=1; t-SNARE coiled-coil homology domain-containing protein OS=Mus musculus OX=10090 GN=Stx12 PE=2 SV=1 1 3 3 0.3279 0 1 1 1 368.55066 1103.63742 1103.63704 0.35 0.00013 0/0 0 0 21940926 HCD 30 MS2 16.61749 283.4 46.222 32.328 6742 6742 6734 QEplus033719.raw F4 366.6 143.7 253.3 295.9 376.6 264.2 318 3.08 1 FALSE 0.0006294 0.009396 0.414 -250 16704 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQPEEPAGR [K].gQPEEPAGR.[A] N-Term(TMT6plex) 3 Q3UZ63 zf-CCCH_3 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Zc3h11a PE=2 SV=1 Q3UZ63; Q3TIV2; Q6NZF1 zf-CCCH_3 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Zc3h11a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zc3h11a PE=2 SV=1; Zinc finger CCCH domain-containing protein 11A OS=Mus musculus OX=10090 GN=Zc3h11a PE=1 SV=1 0 2 2 0.6242 0 1 1 1 585.31006 1169.61284 1169.61122 1.39 0.00081 0/0 0 0 6283882.5 HCD 30 MS2 21.08921 246.1 110 32.3399 6746 6746 6745 QEplus033719.raw F4 244.4 248.8 270 190.9 288.8 234 175 3.3 1 FALSE 1.14E-05 5.75E-05 0.903 -250 16707 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EASSQPESSDANTSS [K].eASSQPESSDANTSS.[-] N-Term(TMT6plex) 1 O70139 cAMP-dependent protein kinase inhibitor gamma OS=Mus musculus OX=10090 GN=Pkig PE=1 SV=1 O70139 cAMP-dependent protein kinase inhibitor gamma OS=Mus musculus OX=10090 GN=Pkig PE=1 SV=1 0 2 2 0.8458 0 1 1 1 863.3855 1725.76372 1725.76125 1.43 0.00124 0/0 0 0 6751056 HCD 30 MS2 0 36.8 110 32.3424 6747 6747 6745 QEplus033719.raw F4 37.2 16.3 44 37.1 30 56 25 4.15 1 FALSE 1.14E-05 6.32E-07 1.275 -250 16717 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMDDDRGPR [R].gMDDDRGPR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.6635 0 1 1 1 416.53873 1247.60163 1247.6 1.3 0.00054 0/0 0 0 38522588 HCD 30 MS2 40.76657 411.5 26.517 32.3469 6749 6749 6745 QEplus033719.raw F4 546 312.6 421.5 352.7 417.8 418.3 69 3.18 1 FALSE 0.0006294 0.009479 0.413 -250 16731 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNEQESMAR [K].gNEQESMAR.[L] N-Term(TMT6plex) 4 P14576 Signal recognition particle 54 kDa protein OS=Mus musculus OX=10090 GN=Srp54 PE=1 SV=2 Q8C1Y6; E9PXC0; P14576; Q99JZ9 Signal recognition particle 54 kDa protein OS=Mus musculus OX=10090 GN=Srp54c PE=2 SV=1; Signal recognition particle 54 kDa protein OS=Mus musculus OX=10090 GN=Srp54c PE=1 SV=1; Signal recognition particle 54 kDa protein OS=Mus musculus OX=10090 GN=Srp54 PE=1 SV=2; Signal recognition particle 54 kDa protein OS=Mus musculus OX=10090 GN=Srp54c PE=2 SV=1 0 2 2 0.6531 0 1 1 1 625.8042 1250.60112 1250.59967 1.16 0.00073 0/0 0 0 10959838 HCD 30 MS2 6.522186 435.8 110 32.3539 6752 6752 6745 QEplus033719.raw F4 441.7 392.4 470.1 337.8 528.9 443.8 59 3.2 1 FALSE 1.14E-05 9.53E-06 1.051 -250 16737 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSCVGADDR [R].dScVGADDR.[S] N-Term(TMT6plex); C3(Carbamidomethyl) 1 Q91WK1 SPRY domain-containing protein 4 OS=Mus musculus OX=10090 GN=Spryd4 PE=1 SV=1 Q91WK1 SPRY domain-containing protein 4 OS=Mus musculus OX=10090 GN=Spryd4 PE=1 SV=1 0 2 2 0.7565 0 1 1 1 612.28082 1223.55437 1223.55238 1.62 0.00099 0/0 0 0 10306639 HCD 30 MS2 43.26868 448.7 110 32.3565 6753 6753 6745 QEplus033719.raw F4 468.8 252.3 440.9 600.3 312.8 617.2 20 3.08 1 FALSE 1.14E-05 7.80E-06 1.068 -250 16745 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFGGPVHHQAQR [R].rFGGPVHHQAQR.[F] N-Term(TMT6plex) 7 Q8BM84 ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1 Q3TT05; Q3UFF9; Q8BTQ1; Q8BM84; P70372; Q8BVF8; Q8BW03 ELAV-like protein (Fragment) OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein (Fragment) OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein 1 OS=Mus musculus OX=10090 GN=Elavl1 PE=1 SV=2; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1 1 4 4 0.5704 0 1 1 1 405.47791 1618.88979 1618.88761 1.35 0.00055 0/0 0 0 7695861.5 HCD 30 MS2 51.50204 306.4 110 32.3589 6754 6754 6745 QEplus033719.raw F4 388.8 180.2 252.1 142.9 463.7 410.9 433 2.84 1 FALSE 1.14E-05 0.0004787 0.726 -250 16766 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGVCPSH [R].dGVcPSH.[-] N-Term(TMT6plex); C4(Carbamidomethyl) 2 Q8VEH6 COBW domain-containing protein 1 OS=Mus musculus OX=10090 GN=Cbwd1 PE=1 SV=1 Q8VEH6; Q8VEH6-2 COBW domain-containing protein 1 OS=Mus musculus OX=10090 GN=Cbwd1 PE=1 SV=1; Isoform 2 of COBW domain-containing protein 1 OS=Mus musculus OX=10090 GN=Cbwd1 0 2 2 0.7866 0 1 1 1 500.74014 1000.47301 1000.47195 1.06 0.00053 0/0 0 0 4385348.5 HCD 30 MS2 33.82629 155.7 110 32.3713 6758 6758 6756 QEplus033719.raw F4 167.8 110.8 165.8 155.5 162.9 171.2 11 2.53 1 FALSE 0.001567 0.02393 0.251 -250 16772 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNLRPSNSGR [K].gNLRPSNSGR.[A] N-Term(TMT6plex) 2 Q6A009 E3 ubiquitin-protein ligase listerin OS=Mus musculus OX=10090 GN=Ltn1 PE=1 SV=3 Q14B86; Q6A009 E3 ubiquitin-protein ligase listerin OS=Mus musculus OX=10090 GN=Ltn1 PE=1 SV=1; E3 ubiquitin-protein ligase listerin OS=Mus musculus OX=10090 GN=Ltn1 PE=1 SV=3 0 3 3 0.1691 0 1 1 1 429.57599 1286.71341 1286.71266 0.58 0.00025 0/0 0 0 9724323 HCD 30 MS2 14.30121 323.7 110 32.3805 6762 6762 6756 QEplus033719.raw F4 430.5 243.1 328.4 263.9 378.7 297.7 299 2.78 1 FALSE 0.001395 0.01996 0.281 -250 16797 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGPGGPQEASR [R].dGPGGPQEASR.[D] N-Term(TMT6plex) 1 Q8BTW9 Serine/threonine-protein kinase PAK 4 OS=Mus musculus OX=10090 GN=Pak4 PE=1 SV=1 Q8BTW9 Serine/threonine-protein kinase PAK 4 OS=Mus musculus OX=10090 GN=Pak4 PE=1 SV=1 0 2 2 0.7038 0 1 1 1 650.3291 1299.65093 1299.64906 1.44 0.00093 0/0 0 0 3232820 HCD 30 MS2 0 96.6 110 32.3905 6766 6766 6756 QEplus033719.raw F4 83.5 85.3 104.3 66.5 121.8 118.4 83 3.14 1 FALSE 1.14E-05 4.41E-10 1.875 -250 16819 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGNVTCER [K].dGNVTcER.[E] N-Term(TMT6plex); C6(Carbamidomethyl) 1 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 0 2 2 0.5188 0 1 1 1 590.28534 1179.5634 1179.56255 0.72 0.00043 0/0 0 0 33606380 HCD 30 MS2 1.581086 543.1 46.858 32.4049 6771 6771 6767 QEplus033719.raw F4 544.1 486.2 575 329.5 841.2 482.4 47 2.66 1 FALSE 2.26E-05 0.0009923 0.663 -250 16825 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGERDVEVER [R].hGERDVEVER.[W] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 4 4 0.5394 0 1 1 1 364.4444 1454.75576 1454.75492 0.58 0.00021 0/0 0 0 31640634 HCD 30 MS2 18.90066 121.7 32.922 32.4071 6772 6772 6767 QEplus033719.raw F4 138.4 99.4 130.7 97 142.5 122.5 211 4.06 2 FALSE 1.14E-05 2.38E-06 1.166 -250 16833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEVAAR [K].eEVAAR.[M] N-Term(TMT6plex) 11 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" Q3URW8; B9EKJ1; E9Q447; B2RXX6; A3KGU9; Q3V1V5; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.3216 0 1 1 2 452.25745 903.50762 903.50971 -2.32 -0.00105 0/0 0 0 20010242 HCD 30 MS2 53.61773 466.9 30.329 32.4094 6773 6773 6767 QEplus033719.raw F4 691.9 357.8 570.5 354.6 425.9 400.5 175 2.27 2 FALSE 0.003134 0.06086 0.112 -250 16838 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVAQQEAQR [K].qVAQQEAQR.[A] N-Term(TMT6plex) 1 O35129 Prohibitin-2 OS=Mus musculus OX=10090 GN=Phb2 PE=1 SV=1 O35129 Prohibitin-2 OS=Mus musculus OX=10090 GN=Phb2 PE=1 SV=1 0 2 2 0.5609 0 1 1 1 643.85522 1286.70317 1286.70143 1.36 0.00087 0/0 0 0 10530980 HCD 30 MS2 22.81053 437.5 110 32.4119 6774 6774 6767 QEplus033719.raw F4 459.7 367.5 473.3 446.8 422.1 455.8 295 3.53 1 FALSE 1.14E-05 6.59E-07 1.272 -250 16848 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGAADVDGR [K].gGAADVDGR.[L] N-Term(TMT6plex) 6 E9Q852 Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=2 A0A668KLE6; E9Q852; E9PYX7; E9Q9C3; Q9QZQ1; Q9QZQ1-2 Afadin (Fragment) OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=1; Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=2; Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=1; Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=1; Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=3; Isoform 1 of Afadin OS=Mus musculus OX=10090 GN=Afdn 0 2 2 0.449 0 1 1 1 523.77582 1046.54436 1046.5428 1.49 0.00078 0/0 0 0 8746077 HCD 30 MS2 17.88618 466.1 110 32.4144 6775 6775 6767 QEplus033719.raw F4 510.9 447.2 475.9 333.5 659.6 369.5 125 3.14 1 FALSE 1.14E-05 1.66E-05 1.005 -250 16866 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RASSQSSAGAMTCR [K].rASSQSSAGAMTcR.[L] N-Term(TMT6plex); C13(Carbamidomethyl) 3 Q3UQS9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1 O55124; Q3UQS9; Q14BI5 M-protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1; Myomesin 2 OS=Mus musculus OX=10090 GN=Myom2 PE=1 SV=1 1 3 3 0.8109 0 1 1 1 566.94635 1698.8245 1698.8213 1.88 0.00106 0/0 0 0 6621505 HCD 30 MS2 20.34186 134.4 110 32.4194 6777 6777 6767 QEplus033719.raw F4 163.1 59.2 103.1 212 80 189.2 94 6.4 1 FALSE 1.14E-05 6.31E-16 3.164 -250 16871 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSAATANASSASCSR [R].sSAATANASSAScSR.[R] N-Term(TMT6plex); C13(Carbamidomethyl) 1 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 0 2 2 0.743 0 1 1 1 828.89478 1656.78227 1656.78088 0.84 0.0007 0/0 0 0 10917692 HCD 30 MS2 0 186 110 32.4267 6779 6779 6778 QEplus033719.raw F4 166.2 151.5 188.2 150.6 257.5 202.1 69 5.33 1 FALSE 1.14E-05 9.42E-16 2.951 -250 16878 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEASGCSR [R].mEASGcSR.[R] N-Term(TMT6plex); C6(Carbamidomethyl) 5 A0A1W2P6H1 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2 A0A1W2P6H1; H7BX05; A2AAJ9; E9QQ96; Z4YJE4 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Obscurin OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3 0 2 2 0.7876 0 1 1 1 563.76294 1126.5186 1126.51824 0.32 0.00018 0/0 0 0 5002821 HCD 30 MS2 13.54851 267.4 110 32.4292 6780 6780 6778 QEplus033719.raw F4 340.9 84.2 234.6 468.1 130.1 346.8 22 2.59 1 FALSE 0.001702 0.02803 0.227 -250 16883 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSAATANASSASCSR [R].sSAATANASSAScSR.[R] N-Term(TMT6plex); C13(Carbamidomethyl) 1 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 0 3 3 0.75 0 1 1 1 552.93225 1656.7822 1656.78088 0.8 0.00044 0/0 0 0 22926830 HCD 30 MS2 14.11593 122.8 90.4 32.4314 6781 6781 6778 QEplus033719.raw F4 142.7 108.4 114.6 104.3 161.7 105.3 70 5.68 1 FALSE 1.14E-05 1.00E-10 1.997 -250 16923 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGERDVEVER [R].hGERDVEVER.[W] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.6101 0 1 1 1 727.88226 1454.75725 1454.75492 1.6 0.00116 0/0 0 0 2898709.75 HCD 30 MS2 13.10453 49.5 110 32.446 6787 6787 6778 QEplus033719.raw F4 55.8 42.1 52.6 29.2 66 51.3 230 3.18 2 FALSE 1.14E-05 1.45E-07 1.397 -250 16939 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDEDVEDR [K].qDEDVEDR.[R] N-Term(TMT6plex) 8 B7ZNY3 Pard3 protein OS=Mus musculus OX=10090 GN=Pard3 PE=1 SV=1 B7ZNY3; E0CXL4; E0CY24; Q99NH2; B2RUK1; G3XA13; A5D6P2; F6S7Z1 Pard3 protein OS=Mus musculus OX=10090 GN=Pard3 PE=1 SV=1; Partitioning defective 3 homolog OS=Mus musculus OX=10090 GN=Pard3 PE=1 SV=1; Partitioning defective 3 homolog OS=Mus musculus OX=10090 GN=Pard3 PE=1 SV=1; Partitioning defective 3 homolog OS=Mus musculus OX=10090 GN=Pard3 PE=1 SV=2; Pard3 protein OS=Mus musculus OX=10090 GN=Pard3 PE=2 SV=1; Partitioning defective 3 homolog OS=Mus musculus OX=10090 GN=Pard3 PE=1 SV=1; Par-3 (Partitioning defective 3) homolog (C. elegans) OS=Mus musculus OX=10090 GN=Pard3 PE=1 SV=1; Partitioning defective 3 homolog (Fragment) OS=Mus musculus OX=10090 GN=Pard3 PE=1 SV=1 0 2 2 0.6562 0 1 1 1 617.79004 1234.5728 1234.57489 -1.69 -0.00104 0/0 0 0 1295220.5 HCD 30 MS2 38.11622 110 110 32.4558 6790 6790 6789 QEplus033719.raw F4 119.7 94 125.4 87.1 117 117.1 23 3.17 1 FALSE 1.14E-05 0.0001778 0.809 -250 16943 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDAEDDPER [R].eDAEDDPER.[T] N-Term(TMT6plex) 4 Q8BH74 Nuclear pore complex protein Nup107 OS=Mus musculus OX=10090 GN=Nup107 PE=1 SV=1 Q8BH74; Q3TT06; Q569X8; E9Q4V9 Nuclear pore complex protein Nup107 OS=Mus musculus OX=10090 GN=Nup107 PE=1 SV=1; Nuclear pore complex protein OS=Mus musculus OX=10090 GN=Nup107 PE=2 SV=1; Nuclear pore complex protein OS=Mus musculus OX=10090 GN=Nup107 PE=2 SV=1; Nuclear pore complex protein OS=Mus musculus OX=10090 GN=Nup107 PE=1 SV=1 0 2 2 0.722 0 1 1 1 652.79126 1304.57524 1304.58037 -3.93 -0.00256 0/0 0 0 587611.9375 HCD 30 MS2 63.44405 58.3 110 32.4583 6791 6791 6789 QEplus033719.raw F4 68.8 46.8 53 43.7 75.4 61.9 14 2.23 1 FALSE 0.001473 0.02128 0.271 -250 16947 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QANMEER [K].qANMEER.[K] N-Term(TMT6plex) 6 A0A0J9YUQ8; P13020-2 Actin-depolymerizing factor (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1;Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn Q3UCW8; Q3U9Q8; A0A0J9YUQ8; P13020-2; Q3TGJ9; P13020 Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1; Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Gelsolin OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=3 0 2 2 0.4625 0 1 1 1 553.7771 1106.54692 1106.54617 0.68 0.00037 0/0 0 0 50579304 HCD 30 MS2 31.11284 553.6 30.601 32.4606 6792 6792 6789 QEplus033719.raw F4 587 478.6 590.3 515.7 658.5 491.6 93 2.53 2 FALSE 0.0007816 0.01085 0.391 -250 16952 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVAQQEAQR [K].qVAQQEAQR.[A] N-Term(TMT6plex) 1 O35129 Prohibitin-2 OS=Mus musculus OX=10090 GN=Phb2 PE=1 SV=1 O35129 Prohibitin-2 OS=Mus musculus OX=10090 GN=Phb2 PE=1 SV=1 0 3 3 0.4824 0 1 1 1 429.57257 1286.70316 1286.70143 1.35 0.00058 0/0 0 0 16277803 HCD 30 MS2 11.91111 170.6 76.753 32.4651 6794 6794 6789 QEplus033719.raw F4 207.7 142.4 170.7 147.6 186.9 168.3 295 3.69 1 FALSE 1.14E-05 0.0004788 0.726 -250 16960 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNSNDDNIR [K].tNSNDDNIR.[A] N-Term(TMT6plex) 3 Q8BKT7 THO complex subunit 5 homolog OS=Mus musculus OX=10090 GN=Thoc5 PE=1 SV=2 Q5SVF9; Q8BKT7; A0A0R4J0J6 THO complex subunit 5 homolog OS=Mus musculus OX=10090 GN=Thoc5 PE=1 SV=1; THO complex subunit 5 homolog OS=Mus musculus OX=10090 GN=Thoc5 PE=1 SV=2; THO complex subunit 5 homolog OS=Mus musculus OX=10090 GN=Thoc5 PE=1 SV=1 0 2 2 0.472 0 1 1 1 639.31854 1277.62981 1277.62832 1.16 0.00074 0/0 0 0 7304603.5 HCD 30 MS2 34.40295 321.7 110 32.4676 6795 6795 6789 QEplus033719.raw F4 350.2 231.1 289.5 372 332.5 355 119 3.22 1 FALSE 1.14E-05 1.53E-06 1.202 -250 16967 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QYEAER [R].qYEAER.[N] N-Term(TMT6plex) 11 O35638 Cohesin subunit SA-2 OS=Mus musculus OX=10090 GN=Stag2 PE=1 SV=3 D6RHQ7; F8WHU7; O35638; Q3TG33; Q3TYZ1; D6REF2; Q8C818; Q3UKR7; A2AFF6; O70576; Q9D3E6 Cohesin subunit SA-1 OS=Mus musculus OX=10090 GN=Stag1 PE=1 SV=1; Cohesin subunit SA-1 OS=Mus musculus OX=10090 GN=Stag1 PE=1 SV=1; Cohesin subunit SA-2 OS=Mus musculus OX=10090 GN=Stag2 PE=1 SV=3; SCD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Stag2 PE=2 SV=1; SCD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Stag3 PE=2 SV=1; Cohesin subunit SA-1 OS=Mus musculus OX=10090 GN=Stag1 PE=1 SV=1; SCD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Stag1 PE=2 SV=1; SCD domain-containing protein OS=Mus musculus OX=10090 GN=Stag3 PE=2 SV=1; Cohesin subunit SA-2 OS=Mus musculus OX=10090 GN=Stag2 PE=1 SV=1; Cohesin subunit SA-3 OS=Mus musculus OX=10090 GN=Stag3 PE=1 SV=2; Cohesin subunit SA-1 OS=Mus musculus OX=10090 GN=Stag1 PE=1 SV=3 0 2 2 0.2512 0 1 1 1 512.76575 1024.52422 1024.52609 -1.83 -0.00094 0/0 0 0 6999587.5 HCD 30 MS2 44.84043 524.2 110 32.4701 6796 6796 6789 QEplus033719.raw F4 497.6 535.7 492.2 449.1 718.1 452.4 89 2.15 1 FALSE 0.005488 0.09295 0.026 -250 16975 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTDASSSTLR [K].rTDASSSTLR.[R] N-Term(TMT6plex) 7 A0A5H1ZRL7 Transformation-related protein 53-binding protein 1 OS=Mus musculus OX=10090 GN=Trp53bp1 PE=1 SV=1 P70399-6; Q8C0U1; P70399-5; Q3V1P7; A0A5H1ZRL7; Q8BZ87; P70399 Isoform 3 of TP53-binding protein 1 OS=Mus musculus OX=10090 GN=Tp53bp1; BRCT domain-containing protein OS=Mus musculus OX=10090 GN=Trp53bp1 PE=2 SV=1; Isoform 2 of TP53-binding protein 1 OS=Mus musculus OX=10090 GN=Tp53bp1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Trp53bp1 PE=2 SV=1; Transformation-related protein 53-binding protein 1 OS=Mus musculus OX=10090 GN=Trp53bp1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Trp53bp1 PE=2 SV=1; TP53-binding protein 1 OS=Mus musculus OX=10090 GN=Tp53bp1 PE=1 SV=3 1 3 3 0.6078 0 1 1 1 441.57974 1322.72467 1322.72256 1.6 0.00071 0/0 0 0 6925030 HCD 30 MS2 48.53217 383.2 110 32.4726 6797 6797 6789 QEplus033719.raw F4 513.6 242.9 458.6 382.8 288.2 413.4 360 4.08 1 FALSE 1.14E-05 3.59E-08 1.512 -250 16990 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERELGSSAR [R].eRELGSSAR.[F] N-Term(TMT6plex) 2 Q8N7N5 DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8 PE=1 SV=1 Q8N7N5-2; Q8N7N5 Isoform 2 of DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8; DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8 PE=1 SV=1 1 3 3 0.4143 0 1 1 1 411.89697 1233.67636 1233.67488 1.2 0.0005 0/0 0 0 5151403.5 HCD 30 MS2 21.68506 282.9 110 32.4776 6799 6799 6789 QEplus033719.raw F4 411.7 194.5 295.4 230.3 303.4 262.3 336 3.21 1 FALSE 1.14E-05 0.000509 0.721 -250 17021 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGERDVEVER [R].hGERDVEVER.[W] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.6389 0 1 1 1 485.59 1454.75544 1454.75492 0.35 0.00017 0/0 0 0 36354584 HCD 30 MS2 3.439034 373.7 52.36 32.4919 6804 6804 6800 QEplus033719.raw F4 397.5 361.1 422.2 270 435.2 356 208 3.96 2 FALSE 1.14E-05 1.67E-08 1.575 -250 17075 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQVTGQSAR [K].aQVTGQSAR.[K] N-Term(TMT6plex) 1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 0 2 2 0.6113 0 1 1 1 573.82654 1146.6458 1146.64285 2.57 0.00147 0/0 0 0 84002672 HCD 30 MS2 13.38646 472.1 14.104 32.5184 6814 6814 6811 QEplus033719.raw F4 474.1 367.7 519.7 470.4 562.7 437.7 285 3.19 1 FALSE 1.14E-05 5.55E-06 1.096 -250 17085 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVDPDGRR [R].eVDPDGRR.[T] N-Term(TMT6plex) 7 E9PUD2 Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1 E9PUD2; Q8K1M6-3; A0A2U3TZ67; Q8K1M6-4; Q8K1M6; Q8K1M6-2; Q3U4P3 Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1; Isoform 3 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1; Isoform 4 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=2; Isoform 2 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein (Fragment) OS=Mus musculus OX=10090 GN=Dnm1l PE=2 SV=1 1 3 3 0.6168 0 1 1 1 391.54584 1172.62296 1172.62212 0.72 0.00028 0/0 0 0 26794094 HCD 30 MS2 47.01558 310.6 46.753 32.5206 6815 6815 6811 QEplus033719.raw F4 350.3 230.4 312.9 322.5 330.8 316.5 150 2.74 1 FALSE 5.44E-05 0.002237 0.588 -250 17120 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDEGTYR [K].tDEGTYR.[C] N-Term(TMT6plex) 9 E9QB01; A0A0A6YY47 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2;Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 E9QB01; P13595-3; P13595-2; A0A0A6YWU2; P13595-4; A0A0A6YY91; A0A0A6YY47; P13595; E9Q589 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2; Isoform 3 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Isoform 2 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Isoform 4 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 (Fragment) OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=3; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 0 2 2 0.5502 0 1 1 1 535.76996 1070.53264 1070.53157 1 0.00054 0/0 0 0 5187363 HCD 30 MS2 45.69089 595.5 110 32.5354 6821 6821 6811 QEplus033719.raw F4 734.9 346.9 617.1 622.6 602.7 648.8 66 2.49 2 FALSE 0.0003408 0.006503 0.468 -250 17141 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGSAGGPGTPR [K].eGSAGGPGTPR.[T] N-Term(TMT6plex) 7 D3YVS1; D3Z3Q3 Smoothelin OS=Mus musculus OX=10090 GN=Smtn PE=1 SV=1;Smoothelin OS=Mus musculus OX=10090 GN=Smtn PE=1 SV=1 D3YVS1; D3Z3Q3; Q921U8; Q921U8-2; Q9D7A0; Q921U8-4; Q921U8-3 Smoothelin OS=Mus musculus OX=10090 GN=Smtn PE=1 SV=1; Smoothelin OS=Mus musculus OX=10090 GN=Smtn PE=1 SV=1; Smoothelin OS=Mus musculus OX=10090 GN=Smtn PE=1 SV=2; Isoform L2 of Smoothelin OS=Mus musculus OX=10090 GN=Smtn; Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 GN=Smtn PE=2 SV=1; Isoform S2 of Smoothelin OS=Mus musculus OX=10090 GN=Smtn; Isoform S1 of Smoothelin OS=Mus musculus OX=10090 GN=Smtn 0 2 2 0.6179 0 1 1 1 607.82056 1214.63384 1214.63268 0.95 0.00058 0/0 0 0 7527279 HCD 30 MS2 8.10295 301.8 110 32.5499 6826 6826 6822 QEplus033719.raw F4 353.4 133.7 384.5 277.2 154 508.1 115 2.8 2 FALSE 1.14E-05 3.84E-08 1.506 -250 17151 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQMTETR [K].sQMTETR.[E] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.6353 0 1 1 1 541.27997 1081.55266 1081.55092 1.6 0.00087 0/0 0 0 6557055 HCD 30 MS2 25.86425 495.7 110 32.5549 6828 6828 6822 QEplus033719.raw F4 637.4 127.6 339.3 981.3 210.6 677.7 111 2.66 2 FALSE 0.000108 0.003086 0.555 -250 17158 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GETGDDGRDGVGSEGR [R].gETGDDGRDGVGSEGR.[R] N-Term(TMT6plex) 5 E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" A0A087WS16; Q05504; J3QQ16; O88493; E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen alpha 3 chain type VI (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Type VI collagen alpha 3 subunit OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" 1 3 3 0.6704 0 1 1 1 598.28027 1792.82627 1792.82591 0.2 0.00012 0/0 0 0 4470199.5 HCD 30 MS2 0 177.2 110 32.5574 6829 6829 6822 QEplus033719.raw F4 195.7 176.2 172.7 146.8 223.2 148.6 39 3.61 1 FALSE 1.14E-05 2.45E-11 2.113 -250 17194 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRGFGSEGSR [K].gRGFGSEGSR.[A] N-Term(TMT6plex) 1 Q9CWZ3-2 Isoform 2 of RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a Q9CWZ3-2 Isoform 2 of RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a 1 3 3 0.6328 0 1 1 1 413.55319 1238.64502 1238.64391 0.9 0.00037 0/0 0 0 21200752 HCD 30 MS2 9.028363 251.3 59.85 32.577 6836 6836 6833 QEplus033719.raw F4 225.2 225.1 288.7 159 374.7 235.2 189 3.35 1 FALSE 1.14E-05 0.0004866 0.725 -250 17209 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTTQVQGGTAEHRPR [K].gTTQVQGGTAEHRPR.[N] N-Term(TMT6plex) 5 B9EJ77 Tanc1 protein OS=Mus musculus OX=10090 GN=Tanc1 PE=2 SV=1 Q80YQ9; B9EJ77; E9QAF9; Q0VGY8; Q8CHA0 Tanc1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tanc1 PE=2 SV=2; Tanc1 protein OS=Mus musculus OX=10090 GN=Tanc1 PE=2 SV=1; Protein TANC1 OS=Mus musculus OX=10090 GN=Tanc1 PE=1 SV=1; Protein TANC1 OS=Mus musculus OX=10090 GN=Tanc1 PE=1 SV=2; MKIAA1728 protein (Fragment) OS=Mus musculus OX=10090 GN=Tanc1 PE=2 SV=1 0 4 4 0.6496 0 1 1 1 456.74777 1823.96926 1823.96737 1.03 0.00047 0/0 0 0 10340106 HCD 30 MS2 5.400517 163.1 103.93 32.5842 6839 6839 6833 QEplus033719.raw F4 178.8 138 184.7 118.6 194.6 164.1 376 5.48 1 FALSE 1.14E-05 1.56E-08 1.581 -250 17215 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEERQDEHGYISR [K].hEERQDEHGYISR.[C] N-Term(TMT6plex) 5 Q545F4 Heat shock 27 kDa protein OS=Mus musculus OX=10090 GN=Hspb1 PE=2 SV=1 Q9Z2L2; Q545F4; D3YZ06; P14602-3; P14602-2 Truncated hsp25 (Fragment) OS=Mus musculus OX=10090 GN=Hspb1 PE=2 SV=1; Heat shock 27 kDa protein OS=Mus musculus OX=10090 GN=Hspb1 PE=2 SV=1; Heat shock protein beta-1 OS=Mus musculus OX=10090 GN=Hspb1 PE=1 SV=1; Isoform C of Heat shock protein beta-1 OS=Mus musculus OX=10090 GN=Hspb1; Isoform B of Heat shock protein beta-1 OS=Mus musculus OX=10090 GN=Hspb1 1 4 4 0.5738 0 1 1 1 471.98474 1884.91713 1884.915 1.13 0.00053 0/0 0 0 7526599 HCD 30 MS2 16.70235 229.4 110 32.5867 6840 6840 6833 QEplus033719.raw F4 269.8 149.5 299.6 187.9 207 262.6 144 5.49 1 FALSE 1.14E-05 5.06E-10 1.863 -250 17243 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQDSMSSDTAR [R].sQDSMSSDTAR.[T] N-Term(TMT6plex) 3 Q3UI57 DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=1 SV=1 Q3UI57; Q3ULD6; Q3UZH2 DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=2 SV=1 0 2 2 0.7523 0 1 1 1 707.32843 1413.64958 1413.64774 1.31 0.00092 0/0 0 0 9938325 HCD 30 MS2 0 204.5 110 32.604 6846 6846 6844 QEplus033719.raw F4 199.4 262.5 175.5 91.4 357.2 140.9 39 3.31 1 FALSE 1.14E-05 2.89E-09 1.72 -250 17258 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSAGPMR [K].gSAGPMR.[L] N-Term(TMT6plex) 7 Q3UXT6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1 E9Q8F0; Q3UXT6; Q8VH51; Q0VGU9; F7AA45; Q8VH51-2; B7ZD61 RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1; RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2; Rbm39 protein OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1; RNA-binding protein 39 (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=1; Isoform 2 of RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39; RNA-binding protein 39 (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=1 0 2 2 0.3122 0 1 1 1 452.74701 904.48674 904.4872 -0.51 -0.00023 0/0 0 0 31044598 HCD 30 MS2 28.98248 539 31.391 32.6085 6848 6848 6844 QEplus033719.raw F4 678.9 463.1 627.5 431.2 600.6 432.6 56 2.21 1 FALSE 0.001177 0.01577 0.323 -250 17266 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASEPAGGPR [K].aSEPAGGPR.[R] N-Term(TMT6plex) 8 Q7TQH0 Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1 J3QP59; Q7TQH0-3; Q7TQH0; Q7TQH0-2; E9Q5Q0; Q3TGG2; Q3TYH7; A0A0U1RPL0 Ataxin-2-like protein (Fragment) OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=8; Isoform 3 of Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l; Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1; Isoform 2 of Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l; Ataxin-2-like protein (Fragment) OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=2; Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1; LsmAD domain-containing protein OS=Mus musculus OX=10090 GN=Atxn2l PE=2 SV=1; Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1 0 2 2 0.5382 0 1 1 1 535.79425 1070.58122 1070.57919 1.9 0.00102 0/0 0 0 28527666 HCD 30 MS2 41.5928 545.7 35.822 32.6108 6849 6849 6844 QEplus033719.raw F4 575.1 379.5 546.1 530.9 626.9 615.6 130 2.49 1 FALSE 1.14E-05 3.57E-05 0.942 -250 17272 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATVNQDTR [R].aTVNQDTR.[L] N-Term(TMT6plex) 5 Q922B2 "Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars1 PE=1 SV=2" Q922B2; Q3TMC5; Q3TF87; Q3UJQ3; Q8BK18 "Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars1 PE=1 SV=2; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1" 0 2 2 0.5878 0 1 1 1 567.30994 1133.6126 1133.61122 1.22 0.00069 0/0 0 0 25141034 HCD 30 MS2 26.37314 489.3 50.486 32.6131 6850 6850 6844 QEplus033719.raw F4 512.6 335.1 498.3 525.8 463.5 600.6 262 2.62 1 FALSE 1.14E-05 0.0001435 0.827 -250 17321 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAVEAER [K].sAVEAER.[L] N-Term(TMT6plex) 5 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q99LY0; Q91YQ5; Q5RKP4; Q3U900; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 0 2 2 0.296 0 1 1 1 495.77539 990.5435 990.54174 1.78 0.00088 0/0 0 0 16852170 HCD 30 MS2 44.99191 498.6 45.226 32.6394 6860 6860 6855 QEplus033719.raw F4 551.3 408.9 536.2 442.4 626.7 425.9 300 2.23 1 FALSE 0.0002419 0.004999 0.501 -250 17329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AATSYR [R].aATSYR.[L] N-Term(TMT6plex) 7 Q60847 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3 Q60847; Q60847-3; E9PX70; Q3TNZ7; Q60847-5; Q60847-4; Q60847-2 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3; Isoform 3 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=1; Isoform 5 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 4 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 2 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 0 2 2 0.2546 0 1 1 1 449.2547 897.50212 897.49915 3.32 0.00149 0/0 0 0 9624176 HCD 30 MS2 38.72757 661.8 110 32.6419 6861 6861 6855 QEplus033719.raw F4 599.1 576.5 693.6 330 1306.9 464.7 62 2.16 1 FALSE 0.004641 0.08207 0.056 -250 17336 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGESQLR [K].qGESQLR.[I] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.2765 0 1 1 1 523.79376 1046.58025 1046.57919 1.01 0.00053 0/0 0 0 7351598 HCD 30 MS2 20.18436 567.7 110 32.6444 6862 6862 6855 QEplus033719.raw F4 701.3 167.1 395.5 1121 257.9 763.5 299 2.17 2 FALSE 0.001421 0.02038 0.278 -250 17356 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HFGAGGNQR [K].hFGAGGNQR.[I] N-Term(TMT6plex) 4 Q3TRJ1 Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=1 SV=1 Q3TRJ1; Q3UQJ1; Q3TKU6; Q3TJ43 Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1; Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1; Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1 0 2 2 0.4559 0 1 1 1 586.81354 1172.6198 1172.61222 6.46 0.00379 0/0 0 0 5123688 HCD 30 MS2 22.23698 292.9 110 32.6519 6865 6865 6855 QEplus033719.raw F4 348.2 198.1 291.9 281.8 353.6 283.5 131 2.72 1 FALSE 1.14E-05 0.0001039 0.854 -250 17372 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGQGPPPPR [R].gGQGPPPPR.[R] N-Term(TMT6plex) 3 Q5DTJ4 MKIAA4178 protein (Fragment) OS=Mus musculus OX=10090 GN=Prrc2a PE=2 SV=1 G3UX48; Q5DTJ4; Q7TSC1 Protein PRRC2A OS=Mus musculus OX=10090 GN=Prrc2a PE=1 SV=1; MKIAA4178 protein (Fragment) OS=Mus musculus OX=10090 GN=Prrc2a PE=2 SV=1; Protein PRRC2A OS=Mus musculus OX=10090 GN=Prrc2a PE=1 SV=1 0 2 2 0.4278 0 1 1 1 546.31158 1091.61589 1091.61591 -0.01 -0.00001 0/0 0 0 1654602.25 HCD 30 MS2 57.65802 256.1 110 32.6618 6868 6868 6866 QEplus033719.raw F4 261.1 217.9 259.7 216.5 341 240.5 239 1.87 1 FALSE 5.44E-05 0.002377 0.582 -250 17398 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HFGAGGNQR [K].hFGAGGNQR.[I] N-Term(TMT6plex) 4 Q3TRJ1 Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=1 SV=1 Q3TRJ1; Q3UQJ1; Q3TKU6; Q3TJ43 Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1; Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1; Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1 0 3 3 0.5599 0 1 1 1 391.54349 1172.61591 1172.61222 3.15 0.00123 0/0 0 0 45343340 HCD 30 MS2 18.26641 193.3 23.366 32.6685 6871 6871 6866 QEplus033719.raw F4 210.7 144.1 191 179.6 232.8 201.8 123 3.84 1 FALSE 1.14E-05 9.76E-07 1.239 -250 17404 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERPQDVDQR [K].eRPQDVDQR.[E] N-Term(TMT6plex) 6 Q8BS26 Uncharacterized protein OS=Mus musculus OX=10090 GN=Akt1 PE=2 SV=1 D3Z783; Q8BS26; P31750; X2CUM2; D3YYP9; D3YXX3 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Akt1 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Akt1 PE=2 SV=1; RAC-alpha serine/threonine-protein kinase OS=Mus musculus OX=10090 GN=Akt1 PE=1 SV=2; Akt1m protein (Fragment) OS=Mus musculus OX=10090 GN=Akt1 PE=2 SV=1; RAC-alpha serine/threonine-protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Akt1 PE=1 SV=1; RAC-alpha serine/threonine-protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Akt1 PE=1 SV=2 0 3 3 0.2528 0 1 1 1 457.91138 1371.71958 1371.71781 1.29 0.00059 0/0 0 0 14912018 HCD 30 MS2 31.70765 418 75.536 32.6708 6872 6872 6866 QEplus033719.raw F4 489.8 364.5 477.2 333.5 452.9 390.1 200 3.52 1 FALSE 1.14E-05 2.12E-05 0.985 -250 17411 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIQGHQPR [K].eIQGHQPR.[I] N-Term(TMT6plex) 3 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q62261; A0A0A0MQG2; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 3 3 0.7159 0 1 1 1 398.55817 1193.65995 1193.65884 0.93 0.00037 0/0 0 0 9646527 HCD 30 MS2 7.386339 281.9 110 32.6732 6873 6873 6866 QEplus033719.raw F4 317.7 200 318 260.3 309.5 285.9 270 4.33 2 FALSE 1.14E-05 1.07E-06 1.232 -250 17420 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LREQGTESR [K].lREQGTESR.[S] N-Term(TMT6plex) 10 Q3UR33; Q61033; Q61029-2 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1;Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4;Isoform Delta of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo" Q3UR33; Q3U7B3; Q61029; Q3U955; Q61033; Q61029-4; Q61033-2; Q78WP6; Q61029-3; Q61029-2 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4; Isoform Gamma of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo; Isoform Zeta of Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo; LEM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Isoform Epsilon of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo; Isoform Delta of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo" 1 2 2 0.3591 0 1 1 1 652.86078 1304.71428 1304.71199 1.75 0.00114 0/0 0 0 5071653 HCD 30 MS2 17.47042 100.4 110 32.6808 6876 6876 6866 QEplus033719.raw F4 86.2 84.5 106.2 83.2 150.2 92.2 337 2.2 3 FALSE 1.14E-05 0.0002601 0.777 -250 17424 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDRVPPSR [R].qDRVPPSR.[N] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 1 2 2 0.3588 0 1 1 1 592.34229 1183.67729 1183.67449 2.37 0.0014 0/0 0 0 3008013 HCD 30 MS2 52.57711 180.9 110 32.6881 6878 6878 6877 QEplus033719.raw F4 172.6 157.7 215 186.5 173.6 179.7 236 1.7 3 FALSE 0.005156 0.08833 0.039 -250 17433 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EETSGNYDSR [K].eETSGNYDSR.[N] N-Term(TMT6plex) 7 E9PV41 Protein diaphanous homolog 1 OS=Mus musculus OX=10090 GN=Diaph1 PE=1 SV=1 E9PV41; O08808; Q5DTQ4; D3Z074; F6XC54; Q3US76; E9PXV7 Protein diaphanous homolog 1 OS=Mus musculus OX=10090 GN=Diaph1 PE=1 SV=1; Protein diaphanous homolog 1 OS=Mus musculus OX=10090 GN=Diaph1 PE=1 SV=1; MKIAA4062 protein (Fragment) OS=Mus musculus OX=10090 GN=Diaph1 PE=2 SV=1; Protein diaphanous homolog 1 OS=Mus musculus OX=10090 GN=Diaph1 PE=1 SV=2; Protein diaphanous homolog 1 OS=Mus musculus OX=10090 GN=Diaph1 PE=1 SV=1; GBD/FH3 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Diaph1 PE=1 SV=1; Protein diaphanous homolog 1 OS=Mus musculus OX=10090 GN=Diaph1 PE=1 SV=1 0 2 2 0.7587 0 1 1 1 693.82166 1386.63603 1386.63347 1.85 0.00128 0/0 0 0 3613719.75 HCD 30 MS2 21.10976 139.5 110 32.6906 6879 6879 6877 QEplus033719.raw F4 143.5 118.3 148.3 127.9 153.2 145.7 28 3.15 1 FALSE 1.14E-05 6.88E-06 1.078 -250 17437 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGGSLPSR [K].rGGSLPSR.[H] N-Term(TMT6plex) 3 E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; E9PZ16; Q2XQV0 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Perlecan (Fragment) OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1 1 3 3 0.3846 0 1 1 1 353.54764 1058.62836 1058.62681 1.47 0.00052 0/0 0 0 102755960 HCD 30 MS2 5.097633 194.1 9.804 32.6929 6880 6880 6877 QEplus033719.raw F4 233.2 151.7 249.6 186.5 133.7 209.7 276 3.38 1 FALSE 0.0002814 0.005734 0.484 -250 17445 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MAAAGGGGGGGR [K].mAAAGGGGGGGR.[Y] N-Term(TMT6plex) 4 G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 Q8R081; Q8BI42; Q3UMT7; G5E924 Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 0 2 2 0.7262 0 1 1 1 574.29639 1147.5855 1147.58396 1.34 0.00077 0/0 0 0 40406356 HCD 30 MS2 42.32084 485.3 22.639 32.6951 6881 6881 6877 QEplus033719.raw F4 523.9 459.2 554.4 390 585.8 398.4 139 3.36 1 FALSE 1.14E-05 1.25E-07 1.409 -250 17451 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSFSQHAR [R].sSFSQHAR.[T] N-Term(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 0 3 3 0.5731 0 1 1 1 383.53888 1148.60208 1148.60099 0.96 0.00037 0/0 0 0 25124046 HCD 30 MS2 31.72109 279.8 32.425 32.6974 6882 6882 6877 QEplus033719.raw F4 310.3 182.6 197.1 298.6 496.1 194 237 4.31 1 FALSE 1.14E-05 0.0009029 0.671 -250 17464 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAQELER [R].rAQELER.[V] N-Term(TMT6plex) 5 A0A1Y7VN19 Dehydrogenase/reductase SDR family member 7 (Fragment) OS=Mus musculus OX=10090 GN=Dhrs7 PE=1 SV=1 A0A140LIS8; A0A1Y7VN19; Q9CXR1; A0A1Y7VJD4; A0A1Y7VLS1 Predicted gene 4756 OS=Mus musculus OX=10090 GN=Gm4756 PE=3 SV=1; Dehydrogenase/reductase SDR family member 7 (Fragment) OS=Mus musculus OX=10090 GN=Dhrs7 PE=1 SV=1; Dehydrogenase/reductase SDR family member 7 OS=Mus musculus OX=10090 GN=Dhrs7 PE=1 SV=2; Predicted gene 4756 (Fragment) OS=Mus musculus OX=10090 GN=Gm4756 PE=4 SV=1; Dehydrogenase/reductase SDR family member 7 OS=Mus musculus OX=10090 GN=Dhrs7 PE=1 SV=1 1 3 3 0.0595 0 1 1 1 377.55426 1130.64823 1130.64794 0.26 0.0001 0/0 0 0 19183782 HCD 30 MS2 39.3054 342.1 60.703 32.7019 6884 6884 6877 QEplus033719.raw F4 478.7 268.6 336.5 268.8 375.8 324 328 2.52 1 FALSE 0.001591 0.02475 0.246 -250 17480 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STYEDQGAR [K].sTYEDQGAR.[Q] N-Term(TMT6plex) 1 Q3UK51 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ptcd3 PE=2 SV=1 Q3UK51 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ptcd3 PE=2 SV=1 0 2 2 0.7242 0 1 1 1 628.31042 1255.61357 1255.61161 1.56 0.00098 0/0 0 0 15330134 HCD 30 MS2 2.17293 409.5 110 32.7067 6886 6886 6877 QEplus033719.raw F4 395.8 333.1 454.1 463.7 353.3 456.7 77 3.3 1 FALSE 1.14E-05 4.81E-06 1.108 -250 17484 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAATSGPAPR [K].gAATSGPAPR.[G] N-Term(TMT6plex) 3 A0A0R4J0B4 CMP-N-acetylneuraminic acid synthase OS=Mus musculus OX=10090 GN=Cmas PE=1 SV=1 A0A0R4J0B4; A0A0N4SWC3; A0A0N4SW65 CMP-N-acetylneuraminic acid synthase OS=Mus musculus OX=10090 GN=Cmas PE=1 SV=1; N-acylneuraminate cytidylyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Cmas PE=1 SV=1; N-acylneuraminate cytidylyltransferase OS=Mus musculus OX=10090 GN=Cmas PE=1 SV=1 0 2 2 0.5351 0 1 1 1 557.31628 1113.62529 1113.62139 3.51 0.00195 0/0 0 0 9324939 HCD 30 MS2 12.83346 306.3 110 32.7092 6887 6887 6877 QEplus033719.raw F4 325.9 225.1 299.8 326.9 334.3 326.1 157 2.71 1 FALSE 1.14E-05 5.17E-06 1.102 -250 17498 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGGAASPATEGR [R].dGGAASPATEGR.[G] N-Term(TMT6plex) 18 E9Q6L0 CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2 E9Q6L0; Q80TV8-2; A0A087WNW8; Q80TV8; A0A087WQ31; A0A087WRK0; E9QNY9; E9QKH0; A5D6Q8; A0A0A6YXZ1; A0A087WQ95; B2RY22; A0A087WS18; A0A087WP42; A0A087WRE8; J3QP81; A0A0A6YWK1; A0A087WQF1 CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; Isoform 2 of CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; Clasp1 protein OS=Mus musculus OX=10090 GN=Clasp1 PE=2 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; Clasp1 protein OS=Mus musculus OX=10090 GN=Clasp1 PE=2 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2 0 2 2 0.7604 0 1 1 1 659.33392 1317.66057 1317.65962 0.72 0.00047 0/0 0 0 8118578 HCD 30 MS2 18.64737 279 110 32.719 6890 6890 6888 QEplus033719.raw F4 306.6 213.7 307.1 252.5 294.2 299.9 135 4.34 1 FALSE 1.14E-05 6.45E-12 2.223 -250 17513 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDTSGHFQR [R].sDTSGHFQR.[L] N-Term(TMT6plex) 2 P97384 Annexin A11 OS=Mus musculus OX=10090 GN=Anxa11 PE=1 SV=2 P97384; D3Z7U0 Annexin A11 OS=Mus musculus OX=10090 GN=Anxa11 PE=1 SV=2; Annexin OS=Mus musculus OX=10090 GN=Anxa11 PE=1 SV=1 0 3 3 0.7039 0 1 1 1 421.88129 1263.62931 1263.62793 1.09 0.00046 0/0 0 0 17782436 HCD 30 MS2 67.26257 353.8 61.283 32.7235 6892 6892 6888 QEplus033719.raw F4 476.5 265.8 324.2 428.2 371.2 257 138 4.93 1 FALSE 1.14E-05 2.09E-08 1.556 -250 17528 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HFGAGGNQR [K].hFGAGGNQR.[I] N-Term(TMT6plex) 4 Q3TRJ1 Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=1 SV=1 Q3TRJ1; Q3UQJ1; Q3TKU6; Q3TJ43 Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1; Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1; Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1 0 2 2 0.4981 0 1 1 1 586.81055 1172.61382 1172.61222 1.36 0.0008 0/0 0 0 10071071 HCD 30 MS2 8.944057 340.1 110 32.7283 6894 6894 6888 QEplus033719.raw F4 388.2 228 332.9 328.3 421.6 341.6 121 2.61 1 FALSE 1.14E-05 3.16E-05 0.952 -250 17536 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQNYCESR [K].eQNYcESR.[Y] N-Term(TMT6plex); C5(Carbamidomethyl) 4 D3Z4J5 Golgi to ER traffic protein 4 homolog (Fragment) OS=Mus musculus OX=10090 GN=Get4 PE=1 SV=1 Q9D1H7-2; D3Z4J5; Q9D1H7; D3Z7S0 Isoform 2 of Golgi to ER traffic protein 4 homolog OS=Mus musculus OX=10090 GN=Get4; Golgi to ER traffic protein 4 homolog (Fragment) OS=Mus musculus OX=10090 GN=Get4 PE=1 SV=1; Golgi to ER traffic protein 4 homolog OS=Mus musculus OX=10090 GN=Get4 PE=1 SV=2; Golgi to ER traffic protein 4 homolog (Fragment) OS=Mus musculus OX=10090 GN=Get4 PE=1 SV=1 0 2 2 0.6565 0 1 1 1 657.80212 1314.59697 1314.59458 1.82 0.0012 0/0 0 0 10031684 HCD 30 MS2 6.649484 293.2 110 32.7308 6895 6895 6888 QEplus033719.raw F4 296.3 251.9 300.5 275.4 349.3 285.9 20 2.94 1 FALSE 0.0006126 0.009054 0.42 -250 17550 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADLDHQR [K].aDLDHQR.[Q] N-Term(TMT6plex) 3 P62071 Ras-related protein R-Ras2 OS=Mus musculus OX=10090 GN=Rras2 PE=1 SV=1 P62071; Q9CTF6; A0A1B0GRT5 Ras-related protein R-Ras2 OS=Mus musculus OX=10090 GN=Rras2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rras2 PE=2 SV=1; Ras-related protein R-Ras2 OS=Mus musculus OX=10090 GN=Rras2 PE=1 SV=1 0 3 3 0.5335 0 1 1 1 361.86343 1083.57575 1083.57444 1.21 0.00044 0/0 0 0 9726289 HCD 30 MS2 14.87347 424.2 110 32.7358 6897 6897 6888 QEplus033719.raw F4 571.8 281.2 438.6 401.7 444 408 139 3.28 1 FALSE 1.14E-05 0.0003245 0.759 -250 17569 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARGGNIGDGGGAADR [K].aRGGNIGDGGGAADR.[V] N-Term(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 1 3 3 0.8176 0 1 1 1 524.94019 1572.806 1572.804 1.28 0.00067 0/0 0 0 47083876 HCD 30 MS2 6.955463 385 41.858 32.7503 6902 6902 6899 QEplus033719.raw F4 385 308 432.9 363.9 421.8 398.5 210 4.77 1 FALSE 1.14E-05 5.20E-14 2.621 -250 17572 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEGSESAPEGQAQQR [K].nEGSESAPEGQAQQR.[R] N-Term(TMT6plex) 5 Q810K5 Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 A2BGG7; Q810K5; P62960; Q71V06; Q60951 Y-box-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=1; Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Y-box-binding protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=3; Y box transcription factor (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1b OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 0 3 3 0.8271 0 1 1 1 606.29291 1816.86417 1816.8623 1.03 0.00062 0/0 0 0 21283472 HCD 30 MS2 3.917677 113.4 99.939 32.7526 6903 6903 6899 QEplus033719.raw F4 112 104.8 126.6 77.1 144.5 115.2 75 5.9 1 FALSE 1.14E-05 2.88E-12 2.29 -250 17577 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRDDGLSAAAR [K].rRDDGLSAAAR.[K] N-Term(TMT6plex) 6 P84102 Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=1 SV=1 A2ARQ4; P84102; D6RCY2; D6RIP7; A2ARQ2; Q58DZ4 Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=1 SV=1; Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=1 SV=1; Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=1 SV=1; Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=1 SV=1; Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=1 SV=1; Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=2 SV=1 2 3 3 0.5408 0 1 1 1 472.93445 1416.78879 1416.78689 1.34 0.00063 0/0 0 0 17535360 HCD 30 MS2 35.63953 279 77.233 32.7549 6904 6904 6899 QEplus033719.raw F4 353.6 223.1 298.8 191.6 339.7 267 371 3.31 1 FALSE 7.59E-05 0.002821 0.564 -250 17585 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEAQANQQA [K].eAEAQANQQA.[-] N-Term(TMT6plex) 1 Q9JJU8 SH3 domain-binding glutamic acid-rich-like protein OS=Mus musculus OX=10090 GN=Sh3bgrl PE=1 SV=1 Q9JJU8 SH3 domain-binding glutamic acid-rich-like protein OS=Mus musculus OX=10090 GN=Sh3bgrl PE=1 SV=1 0 2 2 0.723 0 1 1 1 644.82129 1288.6353 1288.63307 1.73 0.00111 0/0 0 0 16230155 HCD 30 MS2 24.93522 199.7 110 32.7574 6905 6905 6899 QEplus033719.raw F4 192 170.1 223.5 162.9 245.8 203.8 70 2.96 1 FALSE 0.001142 0.01537 0.328 -250 17601 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSTPVR [R].tSTPVR.[SL] N-Term(TMT6plex) 8 Q3TRX4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Palm PE=2 SV=1 Q6ZQE7; Q3TRX4; Q9Z0P4; Q3UP94; Q9Z0P4-2; Q91WF5; Q3UZP7; Q8CB16 MKIAA0270 protein (Fragment) OS=Mus musculus OX=10090 GN=Palm PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Palm PE=2 SV=1; Paralemmin-1 OS=Mus musculus OX=10090 GN=Palm PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Gm10374 PE=2 SV=1; Isoform 2 of Paralemmin-1 OS=Mus musculus OX=10090 GN=Palm; Palm protein OS=Mus musculus OX=10090 GN=Palm PE=2 SV=1; Paralemmin-1 OS=Mus musculus OX=10090 GN=Palm PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Palm PE=2 SV=1 0 2 2 0.2828 0 1 1 1 445.27017 889.53307 889.53045 2.95 0.00131 0/0 0 0 13201877 HCD 30 MS2 25.4508 691.7 110 32.7622 6907 6907 6899 QEplus033719.raw F4 895.2 575.3 790.5 590.2 710.5 588.5 150 1.98 1 FALSE 0.002258 0.04445 0.159 -250 17609 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIQGHQPR [K].eIQGHQPR.[I] N-Term(TMT6plex) 3 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q62261; A0A0A0MQG2; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 2 2 0.6782 0 1 1 1 597.3338 1193.66033 1193.65884 1.25 0.00075 0/0 0 0 9235500 HCD 30 MS2 12.84377 334.9 110 32.7647 6908 6908 6899 QEplus033719.raw F4 378.8 238 384.6 301.4 351.4 355.2 270 2.61 2 FALSE 1.14E-05 0.0007271 0.69 -250 17612 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CCNSCEDVR [K].ccNScEDVR.[E] N-Term(TMT6plex); C1(Carbamidomethyl); C2(Carbamidomethyl); C5(Carbamidomethyl) 4 F6UIS1 Endoplasmic reticulum-Golgi intermediate compartment protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Ergic3 PE=1 SV=8 F6UIS1; Q9CQE7-2; F6RK81; Q9CQE7 Endoplasmic reticulum-Golgi intermediate compartment protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Ergic3 PE=1 SV=8; Isoform 2 of Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Mus musculus OX=10090 GN=Ergic3; Endoplasmic reticulum-Golgi intermediate compartment protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Ergic3 PE=1 SV=1; Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Mus musculus OX=10090 GN=Ergic3 PE=1 SV=1 0 2 2 1 0 1 1 1 714.79797 1428.58867 1428.58674 1.35 0.00097 0/0 0 0 7223134 HCD 30 MS2 0 134.6 110 32.7672 6909 6909 6899 QEplus033719.raw F4 125.2 115.5 162.7 125.3 129 149.6 4 3.51 1 FALSE 1.14E-05 1.49E-05 1.015 -250 17613 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEGSESAPEGQAQQR [K].nEGSESAPEGQAQQR.[R] N-Term(TMT6plex) 5 Q810K5 Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 A2BGG7; Q810K5; P62960; Q71V06; Q60951 Y-box-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=1; Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Y-box-binding protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=3; Y box transcription factor (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1b OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 0 2 2 0.7757 0 1 1 1 908.93646 1816.86565 1816.8623 1.84 0.00167 0/0 0 0 11732996 HCD 30 MS2 4.666424 239.9 110 32.7746 6911 6911 6910 QEplus033719.raw F4 251.1 224.1 257.4 155.5 323.2 228 76 5.26 1 FALSE 1.14E-05 1.37E-15 2.921 -250 17619 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHRPGPIGNER [K].eHRPGPIGNER.[S] N-Term(TMT6plex) 6 F8WHT3 Protein PRRC2B OS=Mus musculus OX=10090 GN=Prrc2b PE=1 SV=1 F8WHT3; Q7TPM1-2; F7AYW2; Q7TPM1; F6Q3E1; Q80TY7 Protein PRRC2B OS=Mus musculus OX=10090 GN=Prrc2b PE=1 SV=1; Isoform 2 of Protein PRRC2B OS=Mus musculus OX=10090 GN=Prrc2b; Protein PRRC2B (Fragment) OS=Mus musculus OX=10090 GN=Prrc2b PE=1 SV=1; Protein PRRC2B OS=Mus musculus OX=10090 GN=Prrc2b PE=1 SV=1; Protein PRRC2B (Fragment) OS=Mus musculus OX=10090 GN=Prrc2b PE=1 SV=1; MKIAA0515 protein (Fragment) OS=Mus musculus OX=10090 GN=Prrc2b PE=2 SV=1 0 4 4 0.4784 0 1 1 1 373.45633 1490.80349 1490.80254 0.64 0.00024 0/0 0 0 5872960 HCD 30 MS2 55.32664 301.4 110 32.777 6912 6912 6910 QEplus033719.raw F4 441.9 155.2 305.3 325.6 229.1 351.4 358 2.32 1 FALSE 0.002233 0.04327 0.163 -250 17626 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEVPGRR [R].eEVPGRR.[G] N-Term(TMT6plex) 4 P62814 "V-type proton ATPase subunit B, brain isoform OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=1 SV=1" P62814; A0A1S6GWG6; Q91YH6; Q99KA3 "V-type proton ATPase subunit B, brain isoform OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=1 SV=1; Vacuolar proton pump subunit B OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=2 SV=1; V-type proton ATPase subunit B, kidney isoform OS=Mus musculus OX=10090 GN=Atp6v1b1 PE=1 SV=1; Vacuolar proton pump subunit B (Fragment) OS=Mus musculus OX=10090 GN=Atp6v1b1 PE=2 SV=1" 1 3 3 0.5307 0 1 1 1 357.8754 1071.61164 1071.61082 0.76 0.00027 0/0 0 0 38255244 HCD 30 MS2 7.75097 323.5 31.934 32.7793 6913 6913 6910 QEplus033719.raw F4 390.8 239.4 346 316 298.3 350.5 158 3.09 1 FALSE 9.73E-05 0.002895 0.562 -250 17629 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FNENNRR [R].fNENNRR.[VL] N-Term(TMT6plex) 4 Q3V471 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1 Q3V471; Q61357; P16110; Q8C253 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1; Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1; Galectin-3 OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=3; Galectin OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=1 1 3 3 0.6069 0 1 1 1 393.5463 1178.62433 1178.62278 1.31 0.00052 0/0 0 0 36688080 HCD 30 MS2 26.40621 571.1 37.892 32.7815 6914 6914 6910 QEplus033719.raw F4 815.2 489.2 576.8 545.6 551.7 447.9 209 2.62 1 FALSE 0.002628 0.05192 0.136 -250 17645 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTCACQEHR [R].vTcAcQEHR.[T] N-Term(TMT6plex); C3(Carbamidomethyl); C5(Carbamidomethyl) 4 Q0PD20 Rab34 OS=Mus musculus OX=10090 GN=Rab34 PE=1 SV=1 B1AQD4; Q0PD20; Q64008; B1AQD3 Ras-related protein Rab-34 (Fragment) OS=Mus musculus OX=10090 GN=Rab34 PE=1 SV=1; Rab34 OS=Mus musculus OX=10090 GN=Rab34 PE=1 SV=1; Ras-related protein Rab-34 OS=Mus musculus OX=10090 GN=Rab34 PE=1 SV=2; Ras-related protein Rab-34 OS=Mus musculus OX=10090 GN=Rab34 PE=1 SV=1 0 3 3 0.7952 0 1 1 1 463.89099 1389.65842 1389.65647 1.4 0.00065 0/0 0 0 19932856 HCD 30 MS2 21.87315 295.1 68.315 32.786 6916 6916 6910 QEplus033719.raw F4 308.7 230.5 282.2 288 392.5 268.4 42 4.98 1 FALSE 1.14E-05 1.09E-06 1.23 -250 17661 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHRPPCAQEAPR [R].eHRPPcAQEAPR.[N] N-Term(TMT6plex); C6(Carbamidomethyl) 3 Q64337-2 Isoform 2 of Sequestosome-1 OS=Mus musculus OX=10090 GN=Sqstm1 D3YZJ1; Q64337; Q64337-2 Sequestosome-1 OS=Mus musculus OX=10090 GN=Sqstm1 PE=1 SV=1; Sequestosome-1 OS=Mus musculus OX=10090 GN=Sqstm1 PE=1 SV=1; Isoform 2 of Sequestosome-1 OS=Mus musculus OX=10090 GN=Sqstm1 0 4 4 0.6789 0 1 1 1 419.96808 1676.85048 1676.84884 0.98 0.00041 0/0 0 0 17025638 HCD 30 MS2 33.80341 286.9 85.196 32.7905 6918 6918 6910 QEplus033719.raw F4 297.6 268.1 355.2 202.9 338.8 258.5 197 4.92 1 FALSE 1.14E-05 9.06E-09 1.625 -250 17675 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ACQEDDVR [K].acQEDDVR.[L] N-Term(TMT6plex); C2(Carbamidomethyl) 3 A0A4X7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ints3 PE=2 SV=1 A0A4X7; A0A0G2JFJ6; Q7TPD0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ints3 PE=2 SV=1; Integrator complex subunit 3 OS=Mus musculus OX=10090 GN=Ints3 PE=1 SV=1; Integrator complex subunit 3 OS=Mus musculus OX=10090 GN=Ints3 PE=1 SV=2 0 2 2 0.6594 0 1 1 1 611.29053 1221.57378 1221.57312 0.54 0.00033 0/0 0 0 6369620 HCD 30 MS2 7.730041 209.8 110 32.7953 6920 6920 6910 QEplus033719.raw F4 220.4 199 222.8 160.1 257.6 198.8 38 2.76 1 FALSE 0.00165 0.02677 0.234 -250 17681 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TRDALQR [R].tRDALQR.[S] N-Term(TMT6plex) 4 Q8C2S9 Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1 Q8C2S9; Q9EQK5; E9Q3X0; Q3THX5 Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=1 SV=4; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=1 SV=1; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1 1 3 3 0.3875 0 1 1 1 363.55096 1088.63834 1088.63737 0.89 0.00032 0/0 0 0 13964080 HCD 30 MS2 7.45511 336.8 110 32.8026 6922 6922 6921 QEplus033719.raw F4 423 215.9 346 351.8 310.2 374 337 2.71 1 FALSE 0.0003496 0.006617 0.466 -250 17688 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMYEQQR [K].rMYEQQR.[D] N-Term(TMT6plex) 1 Q9D7S9 Charged multivesicular body protein 5 OS=Mus musculus OX=10090 GN=Chmp5 PE=1 SV=1 Q9D7S9 Charged multivesicular body protein 5 OS=Mus musculus OX=10090 GN=Chmp5 PE=1 SV=1 1 2 2 0.572 0 1 1 1 620.32745 1239.64763 1239.64656 0.87 0.00054 0/0 0 0 6337900.5 HCD 30 MS2 30.81342 213.6 110 32.8051 6923 6923 6921 QEplus033719.raw F4 221.4 179.9 230.2 197.6 238.6 213.6 161 2.5 1 FALSE 0.008243 0.1409 -0.076 -250 17696 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGQPCMDHDR [K].dGQPcMDHDR.[Q] N-Term(TMT6plex); C5(Carbamidomethyl) 2 Q8BMJ2 "Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2" Q6ZPT2; Q8BMJ2 "Leucyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1; Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2" 0 3 3 0.8104 0 1 1 1 487.21408 1459.62769 1459.62556 1.46 0.00071 0/0 0 0 23578498 HCD 30 MS2 39.19816 265.3 60.898 32.8074 6924 6924 6921 QEplus033719.raw F4 262.3 217.5 259.4 287.3 278.5 287 13 4.22 1 FALSE 1.14E-05 1.88E-06 1.185 -250 17709 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FNENNRR [R].fNENNRR.[VL] N-Term(TMT6plex) 4 Q3V471 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1 Q3V471; Q61357; P16110; Q8C253 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1; Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1; Galectin-3 OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=3; Galectin OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=1 1 2 2 0.4118 0 1 1 1 589.8161 1178.62493 1178.62278 1.82 0.00107 0/0 0 0 10904060 HCD 30 MS2 19.53854 394.9 110 32.8122 6926 6926 6921 QEplus033719.raw F4 403.5 384.8 425.8 372.4 443.7 339 236 2.04 1 FALSE 0.001541 0.02315 0.257 -250 17716 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENQQAANGPNQPSAR [K].eNQQAANGPNQPSAR.[R] N-Term(TMT6plex) 6 Q9JKB3; Q68G78 Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3 PE=1 SV=2;Csda protein OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1 Q9JKB3; Q61478; Q68G78; Q9JKB3-2; Q8BPG0; Q64369 Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3 PE=1 SV=2; DbpA murine homologue OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1; Csda protein OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1; Isoform 2 of Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3; CSD domain-containing protein OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1; Y-box binding protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2bp3 PE=2 SV=1 0 2 2 0.7208 0 1 1 1 905.9549 1810.90251 1810.89935 1.75 0.00158 0/0 0 0 8023919.5 HCD 30 MS2 2.297083 135.2 110 32.8147 6927 6927 6921 QEplus033719.raw F4 157.2 76.1 140.5 139.3 122.8 175 187 5.3 2 FALSE 1.14E-05 4.64E-15 2.82 -250 17729 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARGGNIGDGGGAADR [K].aRGGNIGDGGGAADR.[V] N-Term(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 1 2 2 0.6612 0 1 1 1 786.90674 1572.8062 1572.804 1.4 0.0011 0/0 0 0 7192807 HCD 30 MS2 0 48.5 110 32.8197 6929 6929 6921 QEplus033719.raw F4 46.4 46.5 53.5 30.4 61.4 52.8 210 3.07 1 FALSE 1.14E-05 1.73E-09 1.762 -250 17751 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRDDGLSAAAR [K].rRDDGLSAAAR.[K] N-Term(TMT6plex) 6 P84102 Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=1 SV=1 A2ARQ4; P84102; D6RCY2; D6RIP7; A2ARQ2; Q58DZ4 Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=1 SV=1; Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=1 SV=1; Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=1 SV=1; Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=1 SV=1; Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=1 SV=1; Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=2 SV=1 2 2 2 0.234 0 1 1 1 708.89734 1416.7874 1416.78689 0.36 0.00026 0/0 0 0 2958052.5 HCD 30 MS2 14.50631 39.7 110 32.8321 6933 6933 6932 QEplus033719.raw F4 37.1 46.3 38 24.9 56.7 35.1 373 2.65 1 FALSE 1.14E-05 0.0003476 0.753 -250 17760 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECVGASNQNCR [K].ecVGASNQNcR.[T] N-Term(TMT6plex); C2(Carbamidomethyl); C10(Carbamidomethyl) 1 Q99J27 Acetyl-coenzyme A transporter 1 OS=Mus musculus OX=10090 GN=Slc33a1 PE=1 SV=1 Q99J27 Acetyl-coenzyme A transporter 1 OS=Mus musculus OX=10090 GN=Slc33a1 PE=1 SV=1 0 2 2 0.8608 0 1 1 1 762.34912 1523.69097 1523.68923 1.14 0.00087 0/0 0 0 3788216.5 HCD 30 MS2 0 115.6 110 32.8346 6934 6934 6932 QEplus033719.raw F4 103.4 98.1 123.7 93.9 141.1 133.4 35 3.88 1 FALSE 1.14E-05 3.13E-09 1.713 -250 17774 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NATSVAGR [K].nATSVAGR.[Y] N-Term(TMT6plex) 3 Q925I1 ATPase family AAA domain-containing protein 3 OS=Mus musculus OX=10090 GN=Atad3 PE=1 SV=1 Q925I1-2; H3BK90; Q925I1 "Isoform 2 of ATPase family AAA domain-containing protein 3 OS=Mus musculus OX=10090 GN=Atad3; ATPase family, AAA domain-containing 3A (Fragment) OS=Mus musculus OX=10090 GN=Atad3a PE=1 SV=1; ATPase family AAA domain-containing protein 3 OS=Mus musculus OX=10090 GN=Atad3 PE=1 SV=1" 0 2 2 0.193 0 1 1 1 502.78903 1004.57079 1004.56862 2.15 0.00108 0/0 0 0 28398492 HCD 30 MS2 28.45789 567.9 40.405 32.8391 6936 6936 6932 QEplus033719.raw F4 625.1 414.8 594.8 579.5 604.8 588.2 300 2.28 1 FALSE 1.14E-05 0.0001329 0.833 -250 17783 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATSQSSIR [K].aTSQSSIR.[Q] N-Term(TMT6plex) 1 Q8VBT0 Thioredoxin-related transmembrane protein 1 OS=Mus musculus OX=10090 GN=Tmx1 PE=1 SV=1 Q8VBT0 Thioredoxin-related transmembrane protein 1 OS=Mus musculus OX=10090 GN=Tmx1 PE=1 SV=1 0 2 2 0.0486 0 1 1 1 539.80701 1078.60674 1078.6054 1.24 0.00067 0/0 0 0 18544364 HCD 30 MS2 26.62911 571.1 66.527 32.8414 6937 6937 6932 QEplus033719.raw F4 573.4 544 617.3 472 750.1 469.6 234 2.88 1 FALSE 0.0005556 0.008493 0.43 -250 17796 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHRPPCAQEAPR [R].eHRPPcAQEAPR.[N] N-Term(TMT6plex); C6(Carbamidomethyl) 3 Q64337-2 Isoform 2 of Sequestosome-1 OS=Mus musculus OX=10090 GN=Sqstm1 D3YZJ1; Q64337; Q64337-2 Sequestosome-1 OS=Mus musculus OX=10090 GN=Sqstm1 PE=1 SV=1; Sequestosome-1 OS=Mus musculus OX=10090 GN=Sqstm1 PE=1 SV=1; Isoform 2 of Sequestosome-1 OS=Mus musculus OX=10090 GN=Sqstm1 0 3 3 0.648 0 1 1 1 559.62195 1676.85129 1676.84884 1.46 0.00082 0/0 0 0 11926972 HCD 30 MS2 28.84003 366.1 110 32.8463 6939 6939 6932 QEplus033719.raw F4 358.2 308.3 477.2 299.3 382.2 371.4 202 3.75 1 FALSE 1.14E-05 1.10E-08 1.609 -250 17803 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSEARPGR [R].vSEARPGR.[-] N-Term(TMT6plex) 1 Q99JY4 TraB domain-containing protein OS=Mus musculus OX=10090 GN=Trabd PE=1 SV=1 Q99JY4 TraB domain-containing protein OS=Mus musculus OX=10090 GN=Trabd PE=1 SV=1 0 3 3 0.5473 0 1 1 1 367.55109 1100.63871 1100.63737 1.21 0.00044 0/0 0 0 10532416 HCD 30 MS2 71.31098 606.9 77.659 32.8486 6940 6940 6932 QEplus033719.raw F4 919.4 379.1 795.2 436.8 535.5 575.6 276 2.43 1 FALSE 0.0001707 0.003951 0.529 -250 17817 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLGGDDEER [R].rLGGDDEER.[E] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.5644 0 1 1 1 425.88803 1275.64954 1275.64906 0.38 0.00016 0/0 0 0 10048085 HCD 30 MS2 28.98524 338.7 91.735 32.8531 6942 6942 6932 QEplus033719.raw F4 409.3 226.2 401.7 330.5 298.1 366.5 165 4.27 1 FALSE 1.14E-05 4.27E-05 0.928 -250 17828 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAAEEAEEAR [R].rAAEEAEEAR.[E] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.7268 0 1 1 1 680.85541 1360.70354 1360.70182 1.26 0.00086 0/0 0 0 12642408 HCD 30 MS2 4.5934 87.2 110 32.8629 6945 6945 6943 QEplus033719.raw F4 93.3 68.5 94.1 81.8 78.4 106.9 196 3.66 2 FALSE 1.14E-05 4.19E-08 1.499 -250 17834 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGGSLPAR [K].rGGSLPAR.[H] N-Term(TMT6plex) 3 E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 1 2 2 0.0923 0 1 1 1 521.82031 1042.63335 1042.63189 1.4 0.00073 0/0 0 0 26560740 HCD 30 MS2 4.458555 196.3 49.562 32.8652 6946 6946 6943 QEplus033719.raw F4 186.1 162.5 236.5 210.6 170.5 211.7 164 1.95 1 FALSE 0.003575 0.06852 0.091 -250 17850 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENDGFHR [K].eNDGFHR.[F] N-Term(TMT6plex) 3 Q3U055 Procollagen-lysine 5-dioxygenase OS=Mus musculus OX=10090 GN=Plod2 PE=2 SV=1 Q3U055; Q9R0B9; E9Q718 "Procollagen-lysine 5-dioxygenase OS=Mus musculus OX=10090 GN=Plod2 PE=2 SV=1; Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Mus musculus OX=10090 GN=Plod2 PE=1 SV=2; Procollagen-lysine 5-dioxygenase OS=Mus musculus OX=10090 GN=Plod2 PE=1 SV=1" 0 3 3 0.7171 0 1 1 1 368.51965 1103.54441 1103.54314 1.15 0.00042 0/0 0 0 18109520 HCD 30 MS2 31.52585 358.9 49.468 32.8697 6948 6948 6943 QEplus033719.raw F4 374.7 261.1 432.9 321.6 416.3 346.6 60 3.57 1 FALSE 0.0006294 0.009589 0.411 -250 17879 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEPQNPGANSAR [K].nEPQNPGANSAR.[G] N-Term(TMT6plex) 1 Q9CQD1 Ras-related protein Rab-5A OS=Mus musculus OX=10090 GN=Rab5a PE=1 SV=1 Q9CQD1 Ras-related protein Rab-5A OS=Mus musculus OX=10090 GN=Rab5a PE=1 SV=1 0 2 2 0.7531 0 1 1 1 742.37726 1483.74724 1483.74508 1.45 0.00108 0/0 0 0 4677775 HCD 30 MS2 48.68109 104.3 110 32.8795 6952 6952 6943 QEplus033719.raw F4 106 87.7 130 90.7 86.8 124.4 161 3.24 1 FALSE 1.14E-05 4.99E-11 2.054 -250 17882 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVASPSR [K].nVASPSR.[I] N-Term(TMT6plex) 6 H7BX01 "Dynamin-like 120 kDa protein, form S1 OS=Mus musculus OX=10090 GN=Opa1 PE=1 SV=1" Q8BK99; H7BX01; P58281-2; E0CXD1; Q80TX7; P58281 "Dynamin-like 120 kDa protein, form S1 OS=Mus musculus OX=10090 GN=Opa1 PE=2 SV=1; Dynamin-like 120 kDa protein, form S1 OS=Mus musculus OX=10090 GN=Opa1 PE=1 SV=1; Isoform 2 of Dynamin-like 120 kDa protein, mitochondrial OS=Mus musculus OX=10090 GN=Opa1; Dynamin-like 120 kDa protein, form S1 OS=Mus musculus OX=10090 GN=Opa1 PE=1 SV=1; Dynamin-like 120 kDa protein, form S1 (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0567 PE=4 SV=1; Dynamin-like 120 kDa protein, mitochondrial OS=Mus musculus OX=10090 GN=Opa1 PE=1 SV=1" 0 2 2 0.4101 0 1 1 1 480.27789 959.54851 959.54716 1.41 0.00067 0/0 0 0 4536681.5 HCD 30 MS2 43.95144 345.3 110 32.882 6953 6953 6943 QEplus033719.raw F4 427.9 234.7 345 299 411 354 151 1.78 1 FALSE 0.001591 0.02444 0.248 -250 17907 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGPGPAGPR [R].gGPGPAGPR.[G] N-Term(TMT6plex) 8 Q7TT32; P04258 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1;SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain" Q8BKY2; Q7TT32; Q5DTG2; P04258; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 2 2 0.6226 0 1 1 1 497.78568 994.56407 994.56314 0.93 0.00046 0/0 0 0 36407080 HCD 30 MS2 38.31487 616.2 30.163 32.8941 6957 6957 6954 QEplus033719.raw F4 650.7 514.6 620.8 783.2 438.2 689.8 118 2.65 2 TRUE 0.001028 0.01341 0.353 -250 17913 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGTTDVTR [K].dGTTDVTR.[T] N-Term(TMT6plex) 8 Q3UE92 Xaa-Pro aminopeptidase 1 OS=Mus musculus OX=10090 GN=Xpnpep1 PE=1 SV=1 Q3UE92; Q8VDK8; Q8BKH1; A0A494BBG8; S4R1I3; Q8BV43; Q3TL27; Q3UKF5 Xaa-Pro aminopeptidase 1 OS=Mus musculus OX=10090 GN=Xpnpep1 PE=1 SV=1; Xpnpep1 protein (Fragment) OS=Mus musculus OX=10090 GN=Xpnpep1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Xpnpep1 PE=2 SV=2; Xaa-Pro aminopeptidase 1 OS=Mus musculus OX=10090 GN=Xpnpep1 PE=1 SV=1; Xaa-Pro aminopeptidase 1 OS=Mus musculus OX=10090 GN=Xpnpep1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Xpnpep1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Xpnpep1 PE=2 SV=1; X-prolyl aminopeptidase OS=Mus musculus OX=10090 GN=Xpnpep1 PE=2 SV=1 0 2 2 0.2075 0 1 1 1 547.28741 1093.56755 1093.56868 -1.03 -0.00057 0/0 0 0 9704429 HCD 30 MS2 8.519498 465.4 110 32.8966 6958 6958 6954 QEplus033719.raw F4 569.9 310.7 452.1 440 556.2 463.6 166 2.65 1 FALSE 1.14E-05 0.0003278 0.758 -250 17935 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAHVTDPR [K].nAHVTDPR.[V] N-Term(TMT6plex) 1 Q9CQZ5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Mus musculus OX=10090 GN=Ndufa6 PE=1 SV=1 Q9CQZ5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Mus musculus OX=10090 GN=Ndufa6 PE=1 SV=1 0 2 2 0.5024 0 1 1 1 569.81274 1138.61821 1138.61664 1.38 0.00079 0/0 0 0 3477699.5 HCD 30 MS2 55.80732 238.7 110 32.9041 6961 6961 6954 QEplus033719.raw F4 295.6 171.8 277.7 235.2 241.3 210.6 195 2.05 1 FALSE 0.001567 0.02396 0.251 -250 17942 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QNNVPQESR [K].qNNVPQESR.[F] N-Term(TMT6plex) 5 H3BK33 Mediator complex subunit 23 (Fragment) OS=Mus musculus OX=10090 GN=Med23 PE=1 SV=1 Q80YQ2-2; H3BK33; Q80YQ2; E9QNV2; F8WJB0 Isoform 2 of Mediator of RNA polymerase II transcription subunit 23 OS=Mus musculus OX=10090 GN=Med23; Mediator complex subunit 23 (Fragment) OS=Mus musculus OX=10090 GN=Med23 PE=1 SV=1; Mediator of RNA polymerase II transcription subunit 23 OS=Mus musculus OX=10090 GN=Med23 PE=1 SV=2; Mediator complex subunit 23 OS=Mus musculus OX=10090 GN=Med23 PE=1 SV=1; Mediator complex subunit 23 OS=Mus musculus OX=10090 GN=Med23 PE=1 SV=1 0 2 2 0.6062 0 1 1 1 650.8443 1300.68132 1300.68069 0.48 0.00031 0/0 0 0 2581872.5 HCD 30 MS2 9.851675 114.3 110 32.9066 6962 6962 6954 QEplus033719.raw F4 94.7 112.5 120.4 84.3 144.5 129.1 168 2.92 1 FALSE 1.14E-05 8.43E-06 1.062 -250 17963 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMFGGSGTSSRPSSNR [R].rmFGGSGTSSRPSSNR.[S] N-Term(TMT6plex); M2(Oxidation) 8 Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; A2AKJ2; Q3U6S1; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 1 4 4 0.6094 0 1 1 1 482.99475 1928.95717 1928.95582 0.7 0.00034 0/0 0 0 6770016 HCD 30 MS2 4.880431 153.7 110 32.9214 6967 6967 6965 QEplus033719.raw F4 176.4 115.9 174.2 136.3 159.8 159.5 184 2.97 1 FALSE 0.0003408 0.006564 0.467 -250 17969 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGSSLPAR [RK].rGSSLPAR.[RH] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 Q3UZW1; B1B0C7; E9PZ16; Q05793 Uncharacterized protein OS=Mus musculus OX=10090 GN=Gm10353 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 1 3 3 0.3169 0 1 1 1 358.21918 1072.64298 1072.64246 0.49 0.00017 0/0 0 0 60727936 HCD 30 MS2 19.98058 182.1 15.566 32.9237 6968 6968 6965 QEplus033719.raw F4 194.3 150.8 207.6 177.9 146 216.2 235 3.25 2 FALSE 1.14E-05 4.16E-05 0.93 -250 17983 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAAPPPAASGHR [K].gAAPPPAASGHR.[E] N-Term(TMT6plex) 3 A2ARP8 Microtubule-associated protein 1A OS=Mus musculus OX=10090 GN=Map1a PE=1 SV=1 A2ARP8; Q9QYR6; Q9QYR6-2 Microtubule-associated protein 1A OS=Mus musculus OX=10090 GN=Map1a PE=1 SV=1; Microtubule-associated protein 1A OS=Mus musculus OX=10090 GN=Map1a PE=1 SV=2; Isoform 2 of Microtubule-associated protein 1A OS=Mus musculus OX=10090 GN=Map1a 0 3 3 0.6293 0 1 1 1 439.91241 1317.72269 1317.7225 0.15 0.00006 0/0 0 0 7345877.5 HCD 30 MS2 72.86011 380.3 91.068 32.9306 6971 6971 6965 QEplus033719.raw F4 515.2 322.8 407.4 280.5 428.1 327.8 288 3.48 1 FALSE 1.14E-05 6.20E-05 0.897 -250 18007 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENQGDETQGQQPPQR [K].eNQGDETQGQQPPQR.[RQ] N-Term(TMT6plex) 7 Q810K5 Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 A2BGG7; Q810K5; Q8BRJ5; Q60950; P62960; Q71V06; Q60951 Y-box-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=1; Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1a OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Y-box-binding protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=3; Y box transcription factor (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1b OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 0 3 3 0.828 0 1 1 1 647.64728 1940.92728 1940.92596 0.68 0.00044 0/0 0 0 3245046.5 HCD 30 MS2 0 59.8 110 32.9381 6974 6974 6965 QEplus033719.raw F4 61 44.2 57.2 48 84.2 64.1 114 6.51 1 FALSE 1.14E-05 3.66E-14 2.65 -250 18031 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGSSLPAR [RK].rGSSLPAR.[RH] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 Q3UZW1; B1B0C7; E9PZ16; Q05793 Uncharacterized protein OS=Mus musculus OX=10090 GN=Gm10353 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 1 2 2 0.3364 0 1 1 1 536.82599 1072.6447 1072.64246 2.09 0.00112 0/0 0 0 10663536 HCD 30 MS2 8.381065 255.8 110 32.9552 6980 6980 6976 QEplus033719.raw F4 277.3 210.4 314.8 243.3 223.4 265.9 271 2.2 2 FALSE 0.003793 0.0718 0.083 -250 18041 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQLQER [K].nQLQER.[D] N-Term(TMT6plex) 3 Q5BKS5 Hook homolog 3 (Drosophila) OS=Mus musculus OX=10090 GN=Hook3 PE=2 SV=1 Q3UUZ6; Q5BKS5; Q8BUK6 HOOK domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hook3 PE=2 SV=1; Hook homolog 3 (Drosophila) OS=Mus musculus OX=10090 GN=Hook3 PE=2 SV=1; Protein Hook homolog 3 OS=Mus musculus OX=10090 GN=Hook3 PE=1 SV=2 0 2 2 0.1714 0 1 1 1 508.78867 1016.57005 1016.56862 1.41 0.00072 0/0 0 0 6424251.5 HCD 30 MS2 11.90286 429.5 110 32.9577 6981 6981 6976 QEplus033719.raw F4 603.8 276.7 358.8 370.4 638.7 328.6 263 2.45 1 FALSE 0.001719 0.02897 0.222 -250 18057 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVEGEASCNSR [K].qVEGEAScNSR.[K] N-Term(TMT6plex); C8(Carbamidomethyl) 5 Q8N9S3 Activator of 90 kDa heat shock protein ATPase homolog 2 OS=Mus musculus OX=10090 GN=Ahsa2 PE=1 SV=2 Q8N9S3; Q8N9S3-3; A2AF82; Q8N9S3-2; F6S1R2 Activator of 90 kDa heat shock protein ATPase homolog 2 OS=Mus musculus OX=10090 GN=Ahsa2 PE=1 SV=2; Isoform 3 of Activator of 90 kDa heat shock protein ATPase homolog 2 OS=Mus musculus OX=10090 GN=Ahsa2; Activator of 90 kDa heat shock protein ATPase homolog 2 (Fragment) OS=Mus musculus OX=10090 GN=Ahsa2 PE=1 SV=1; Isoform 2 of Activator of 90 kDa heat shock protein ATPase homolog 2 OS=Mus musculus OX=10090 GN=Ahsa2; Activator of 90 kDa heat shock protein ATPase homolog 2 (Fragment) OS=Mus musculus OX=10090 GN=Ahsa2 PE=1 SV=1 0 2 2 0.7535 0 1 1 1 733.35077 1465.69426 1465.69027 2.72 0.00199 0/0 0 0 2242719.75 HCD 30 MS2 9.096707 86.7 110 32.9627 6983 6983 6976 QEplus033719.raw F4 87 60.9 90.9 93.2 88.1 100.1 75 3.53 1 FALSE 1.14E-05 1.29E-09 1.786 -250 18068 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CESNTVTQSR [K].cESNTVTQSR.[L] N-Term(TMT6plex); C1(Carbamidomethyl) 3 F8VQ05 FRY-like transcription coactivator OS=Mus musculus OX=10090 GN=Fryl PE=1 SV=1 F6Q1V8; F8VQ05; Q8BIA1 FRY-like transcription coactivator (Fragment) OS=Mus musculus OX=10090 GN=Fryl PE=1 SV=2; FRY-like transcription coactivator OS=Mus musculus OX=10090 GN=Fryl PE=1 SV=1; MOR2-PAG1_N domain-containing protein OS=Mus musculus OX=10090 GN=Fryl PE=2 SV=1 0 2 2 0.6216 0 1 1 1 705.8476 1410.68791 1410.68446 2.45 0.00173 0/0 0 0 1334932.125 HCD 30 MS2 19.83049 52.5 110 32.9677 6985 6985 6976 QEplus033719.raw F4 54.4 43.2 57.7 47.2 58 54.7 85 2.59 1 FALSE 1.14E-05 4.70E-07 1.3 -250 18073 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENQGDETQGQQPPQR [K].eNQGDETQGQQPPQR.[RQ] N-Term(TMT6plex) 7 Q810K5 Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 A2BGG7; Q810K5; Q8BRJ5; Q60950; P62960; Q71V06; Q60951 Y-box-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=1; Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1a OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Y-box-binding protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=3; Y box transcription factor (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1b OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 0 2 2 0.8037 0 1 1 1 970.96918 1940.93108 1940.92596 2.64 0.00256 0/0 0 0 1054052.125 HCD 30 MS2 0 52.3 110 32.9703 6986 6986 6976 QEplus033719.raw F4 50.8 34 58.3 42 70.1 58.9 114 4.84 1 FALSE 1.14E-05 1.23E-15 2.929 -250 18093 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDIHAGGGGAR [K].eDIHAGGGGAR.[A] N-Term(TMT6plex) 1 Q9CX86 Heterogeneous nuclear ribonucleoprotein A0 OS=Mus musculus OX=10090 GN=Hnrnpa0 PE=1 SV=1 Q9CX86 Heterogeneous nuclear ribonucleoprotein A0 OS=Mus musculus OX=10090 GN=Hnrnpa0 PE=1 SV=1 0 3 3 0.623 0 1 1 1 423.55667 1268.65546 1268.65448 0.77 0.00033 0/0 0 0 40886472 HCD 30 MS2 25.54535 333.1 30.421 32.9846 6991 6991 6987 QEplus033719.raw F4 422.6 285.2 365.5 279.9 353.7 291.6 164 3.05 1 FALSE 1.14E-05 8.30E-07 1.253 -250 18099 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVQHNCQLHR [K].eVQHNcQLHR.[I] N-Term(TMT6plex); C6(Carbamidomethyl) 4 Q0PNF0 Gulp-2 OS=Mus musculus OX=10090 GN=Gulp1 PE=2 SV=1 E0CXC5; Q8K2A1-2; Q0PNF0; Q8K2A1 PTB domain-containing engulfment adapter protein 1 OS=Mus musculus OX=10090 GN=Gulp1 PE=1 SV=1; Isoform 2 of PTB domain-containing engulfment adapter protein 1 OS=Mus musculus OX=10090 GN=Gulp1; Gulp-2 OS=Mus musculus OX=10090 GN=Gulp1 PE=2 SV=1; PTB domain-containing engulfment adapter protein 1 OS=Mus musculus OX=10090 GN=Gulp1 PE=1 SV=1 0 4 4 0.5601 0 1 1 1 388.20251 1549.78823 1549.78551 1.75 0.00068 0/0 0 0 31739282 HCD 30 MS2 54.26923 242.9 20.834 32.9869 6992 6992 6987 QEplus033719.raw F4 393.1 177.2 258.9 185.7 193.3 249.3 183 3.41 1 FALSE 5.44E-05 0.002193 0.59 -250 18118 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SISQQSGAR [K].sISQQSGAR.[I] N-Term(TMT6plex) 10 A0A0G2JFY5 Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1 A0A0G2JFY5; A0A0G2JG96; Q91WJ8-2; A0A0G2JGW9; Q0P6B2; A0A0G2JG00; Q3TUE1; Q91WJ8; Q3UUU2; Q3TIS5 Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Isoform 2 of Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element (FUSE) binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=2 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fubp1 PE=2 SV=1 0 2 2 0.5287 0 1 1 1 581.82294 1162.6386 1162.63777 0.72 0.00042 0/0 0 0 6913061 HCD 30 MS2 32.15376 660 110 32.9941 6995 6995 6987 QEplus033719.raw F4 696.9 606.6 675.6 497.5 930.3 553.1 297 3.48 1 FALSE 1.14E-05 9.42E-06 1.052 -250 18141 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEEQAVR [K].aEEQAVR.[Q] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.2 0 1 1 1 516.28864 1031.56999 1031.56829 1.65 0.00085 0/0 0 0 96055136 HCD 30 MS2 3.106015 422.8 12.705 33.0062 6999 6999 6998 QEplus033719.raw F4 532.1 300.9 426.1 406 478.8 393 312 2.5 2 FALSE 0.0003211 0.006266 0.473 -250 18159 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATNVCTR [K].aTNVcTR.[F] N-Term(TMT6plex); C5(Carbamidomethyl) 3 Q91ZW3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Mus musculus OX=10090 GN=Smarca5 PE=1 SV=1 B2RT32; Q3URV3; Q91ZW3 "Predicted gene, OTTMUSG00000010105 OS=Mus musculus OX=10090 GN=Gm13034 PE=2 SV=1; Helicase ATP-binding domain-containing protein OS=Mus musculus OX=10090 GN=Gm13034 PE=2 SV=1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Mus musculus OX=10090 GN=Smarca5 PE=1 SV=1" 0 2 2 0.4875 0 1 1 1 525.78229 1050.5573 1050.55634 0.91 0.00048 0/0 0 0 20317704 HCD 30 MS2 31.96986 682.5 89.733 33.0107 7001 7001 6998 QEplus033719.raw F4 745.2 579.1 779.6 484.8 932.4 573.9 167 2.4 1 FALSE 0.0003996 0.007195 0.454 -250 18174 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDIHAGGGGAR [K].eDIHAGGGGAR.[A] N-Term(TMT6plex) 1 Q9CX86 Heterogeneous nuclear ribonucleoprotein A0 OS=Mus musculus OX=10090 GN=Hnrnpa0 PE=1 SV=1 Q9CX86 Heterogeneous nuclear ribonucleoprotein A0 OS=Mus musculus OX=10090 GN=Hnrnpa0 PE=1 SV=1 0 2 2 0.5874 0 1 1 1 634.83179 1268.6563 1268.65448 1.43 0.00091 0/0 0 0 10187910 HCD 30 MS2 4.54563 374.6 110 33.02 7005 7005 6998 QEplus033719.raw F4 375.8 348.4 364.7 274.5 523.4 360.5 159 2.86 1 FALSE 1.14E-05 3.29E-07 1.329 -250 18178 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIQHHLR [K].sIQHHLR.[T] N-Term(TMT6plex) 4 Q9CR26 Vacuolar protein sorting-associated protein VTA1 homolog OS=Mus musculus OX=10090 GN=Vta1 PE=1 SV=1 Q3V4B3; F8WJC2; F6W5Q8; Q9CR26 Vta1 domain-containing protein OS=Mus musculus OX=10090 GN=Vta1 PE=2 SV=1; Vacuolar protein sorting-associated protein VTA1 homolog OS=Mus musculus OX=10090 GN=Vta1 PE=1 SV=1; Vacuolar protein sorting-associated protein VTA1 homolog (Fragment) OS=Mus musculus OX=10090 GN=Vta1 PE=1 SV=8; Vacuolar protein sorting-associated protein VTA1 homolog OS=Mus musculus OX=10090 GN=Vta1 PE=1 SV=1 0 3 3 0.1469 0 1 1 1 373.89294 1119.66428 1119.65844 5.21 0.00195 0/0 0 0 3276843.5 HCD 30 MS2 78.84678 406.9 110 33.0225 7006 7006 6998 QEplus033719.raw F4 615 245.6 431.6 377.6 340.5 431.3 162 2.86 1 FALSE 7.59E-05 0.002795 0.565 -250 18188 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDDNSAANNSANEK [R].rDDNSAANNSANEk.[E] N-Term(TMT6plex); K14(TMT6plex) 7 A0JNY7 "Eukaryotic translation initiation factor 4, gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=2 SV=1" A0JNY7; F7DAB1; F6TW20; Q62448; Q62448-2; F7CBP1; G3XA17 "Eukaryotic translation initiation factor 4, gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 2 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g2 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 2 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g2 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=1 SV=2; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2; Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=1 SV=1" 1 3 3 0.7982 0 1 1 1 655.33246 1963.98282 1963.98337 -0.28 -0.00018 0/0 0 0 2154526.75 HCD 30 MS2 25.02137 135.7 110 33.025 7007 7007 6998 QEplus033719.raw F4 186.6 99.9 147.5 89.5 144.7 146.2 221 5.5 1 FALSE 1.14E-05 7.05E-16 2.977 -250 18223 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENEALRR [K].eNEALRR.[H] N-Term(TMT6plex) 4 Q8BH60 Golgi-associated PDZ and coiled-coil motif-containing protein OS=Mus musculus OX=10090 GN=Gopc PE=1 SV=1 Q8BH60; Q8BH60-2; A0A1W2P7V0; K3W4Q9 Golgi-associated PDZ and coiled-coil motif-containing protein OS=Mus musculus OX=10090 GN=Gopc PE=1 SV=1; Isoform 2 of Golgi-associated PDZ and coiled-coil motif-containing protein OS=Mus musculus OX=10090 GN=Gopc; Golgi-associated PDZ and coiled-coil motif-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gopc PE=1 SV=1; Golgi-associated PDZ and coiled-coil motif-containing protein OS=Mus musculus OX=10090 GN=Gopc PE=1 SV=1 1 3 3 0.2295 0 1 1 1 372.88278 1116.63379 1116.63229 1.35 0.0005 0/0 0 0 7175432.5 HCD 30 MS2 21.06634 331.1 110 33.0466 7015 7015 7009 QEplus033719.raw F4 430.4 256.7 331.6 265.2 389.1 313.8 335 3.05 1 FALSE 5.44E-05 0.001843 0.606 -250 18230 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDDDEEEAARER [R].nDDDEEEAARER.[R] N-Term(TMT6plex) 9 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; E9QA15; E9Q0M9; D3Z6I7; S4R1T7; E9Q9F3; Q7TMN5; E9QA16; Q3TUS1 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Cald1 protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1 1 3 3 0.7055 0 1 1 1 559.92249 1677.7529 1677.75135 0.92 0.00052 0/0 0 0 7158499.5 HCD 30 MS2 66.43389 534.3 110 33.0491 7016 7016 7009 QEplus033719.raw F4 487.7 482.3 572.9 460.8 691.5 510.7 27 4.21 1 FALSE 1.14E-05 1.02E-08 1.615 -250 18236 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQAYQER [R].eQAYQER.[R] N-Term(TMT6plex) 2 A2AQA7 RNA helicase aquarius OS=Mus musculus OX=10090 GN=Aqr PE=1 SV=1 A2AQA7; Q8CFQ3 RNA helicase aquarius OS=Mus musculus OX=10090 GN=Aqr PE=1 SV=1; RNA helicase aquarius OS=Mus musculus OX=10090 GN=Aqr PE=1 SV=2 0 2 2 0.5062 0 1 1 1 576.79578 1152.58428 1152.58467 -0.34 -0.0002 0/0 0 0 5024660 HCD 30 MS2 40.03495 399.7 110 33.0516 7017 7017 7009 QEplus033719.raw F4 397 337.9 419.6 409.1 414.1 420.7 91 2.43 1 FALSE 0.001541 0.02314 0.257 -250 18265 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRAEDLNTR [R].sRAEDLNTR.[V] N-Term(TMT6plex) 2 D3YZZ5 Transmembrane p24-trafficking protein 7 OS=Mus musculus OX=10090 GN=Tmed7 PE=1 SV=1 E9Q7G1; D3YZZ5 Transmembrane p24-trafficking protein 7 OS=Mus musculus OX=10090 GN=Tmed7 PE=1 SV=1; Transmembrane p24-trafficking protein 7 OS=Mus musculus OX=10090 GN=Tmed7 PE=1 SV=1 1 3 3 0.5376 0 1 1 1 430.90387 1290.69706 1290.69634 0.55 0.00024 0/0 0 0 52039952 HCD 30 MS2 45.55249 387.9 15.866 33.0687 7023 7023 7020 QEplus033719.raw F4 496.3 286.8 465.1 348.6 352.8 377.8 334 3.59 1 FALSE 1.14E-05 0.000762 0.686 -250 18278 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVEEAER [K].qVEEAER.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.3929 0 1 1 1 545.29156 1089.57585 1089.57377 1.91 0.00104 0/0 0 0 47008752 HCD 30 MS2 8.767772 548.9 29.38 33.0732 7025 7025 7020 QEplus033719.raw F4 670.3 374.8 526.8 505 675.7 541 211 2.8 2 FALSE 0.0004191 0.007442 0.449 -250 18290 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHYAYDCHR [K].gHYAYDcHR.[Y] N-Term(TMT6plex); C7(Carbamidomethyl) 8 Q8BL97 Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1 Q8BL97; A0A3Q4L393; Q8BL97-4; A0A3Q4L335; A0A3Q4EGP0; Q8BL97-3; A0A3Q4EH04; Q3THA6 Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Serine/arginine-rich-splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Isoform 4 of Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7; Serine/arginine-rich-splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Serine/arginine-rich-splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Isoform 3 of Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7; Serine/arginine-rich-splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Srsf7 PE=2 SV=1 0 3 3 0.6422 0 1 1 1 469.88608 1407.64368 1407.64253 0.81 0.00038 0/0 0 0 8010867 HCD 30 MS2 42.23163 354.3 110 33.0802 7028 7028 7020 QEplus033719.raw F4 351.5 324.3 398 302 420.6 329.5 39 4.08 1 FALSE 1.14E-05 2.52E-06 1.161 -250 18296 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEVCSAR [K].eEVcSAR.[T] N-Term(TMT6plex); C4(Carbamidomethyl) 4 F8VQB6 Unconventional myosin-X OS=Mus musculus OX=10090 GN=Myo10 PE=1 SV=1 F8VQB6; F8VQB6-2; E9Q5G1; Q80TR9 Unconventional myosin-X OS=Mus musculus OX=10090 GN=Myo10 PE=1 SV=1; Isoform Headless of Unconventional myosin-X OS=Mus musculus OX=10090 GN=Myo10; Unconventional myosin-X OS=Mus musculus OX=10090 GN=Myo10 PE=1 SV=1; MKIAA0799 protein (Fragment) OS=Mus musculus OX=10090 GN=Myo10 PE=2 SV=1 0 2 2 0.4015 0 1 1 1 540.27026 1079.53325 1079.53527 -1.87 -0.00101 0/0 0 0 3622260.75 HCD 30 MS2 35.85172 359.4 110 33.0827 7029 7029 7020 QEplus033719.raw F4 365.4 231.6 376.4 415.8 356.4 410.9 89 2.74 1 FALSE 0.0003211 0.006328 0.472 -250 18302 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLGDQSSSR [R].gLGDQSSSR.[T] N-Term(TMT6plex) 17 A0A1L7NR37 Arg/Abl-binding protein 2 OS=Mus musculus OX=10090 GN=Sorbs2 PE=2 SV=1 A0A1L7NR37; A0A0R4J1X5; Q3UTJ2; A0A0R4J1T1; A0A0R4J1W0; F6V513; Q3UTJ2-4; Q3UTJ2-2; B7ZWM6; B2RXQ9; F6ZWT0; B9EKP8; D3Z080; A0A0S3CWK3; Q3UTJ2-5; Z4YJR7; Q3UTJ2-3 Arg/Abl-binding protein 2 OS=Mus musculus OX=10090 GN=Sorbs2 PE=2 SV=1; Sorbin and SH3 domain-containing protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Sorbs2 PE=1 SV=1; Sorbin and SH3 domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sorbs2 PE=1 SV=2; Sorbin and SH3 domain-containing protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Sorbs2 PE=1 SV=1; Sorbin and SH3 domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sorbs2 PE=1 SV=1; Sorbin and SH3 domain-containing protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Sorbs2 PE=1 SV=8; Isoform 4 of Sorbin and SH3 domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sorbs2; Isoform 2 of Sorbin and SH3 domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sorbs2; Sorbin and SH3 domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sorbs2 PE=1 SV=1; Sorbin and SH3 domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sorbs2 PE=1 SV=1; Sorbin and SH3 domain-containing protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Sorbs2 PE=1 SV=8; Sorbin and SH3 domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sorbs2 PE=1 SV=1; Sorbin and SH3 domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sorbs2 PE=1 SV=1; NArgBP2 OS=Mus musculus OX=10090 GN=Sorbs2 PE=2 SV=1; Isoform 5 of Sorbin and SH3 domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sorbs2; Sorbin and SH3 domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sorbs2 PE=1 SV=1; Isoform 3 of Sorbin and SH3 domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sorbs2 0 2 2 0.5191 0 1 1 1 568.2998 1135.59233 1135.59048 1.63 0.00093 0/0 0 0 2867516.25 HCD 30 MS2 16.06153 281.5 110 33.0852 7030 7030 7020 QEplus033719.raw F4 329.4 132.4 294.4 326.2 243 363.7 184 2.62 1 FALSE 1.14E-05 1.52E-05 1.013 -250 18321 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQEHILR [K].hQEHILR.[F] N-Term(TMT6plex) 3 Q5EBP9 Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 Q62318-2; Q5EBP9; Q3UDN8 Isoform 2 of Transcription intermediary factor 1-beta OS=Mus musculus OX=10090 GN=Trim28; Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 0 3 3 0.5345 0 1 1 1 387.89484 1161.66996 1161.66901 0.82 0.00032 0/0 0 0 53915112 HCD 30 MS2 18.67216 203.6 19.607 33.0973 7034 7034 7031 QEplus033719.raw F4 253.9 184.2 224.7 147.7 190.3 221.1 247 4.06 1 FALSE 1.14E-05 0.0005537 0.714 -250 18336 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAQSTAMNR [R].aAQSTAMNR.[H] N-Term(TMT6plex) 1 P46460 Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Nsf PE=1 SV=2 P46460 Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Nsf PE=1 SV=2 0 2 2 0.6687 0 1 1 1 589.81165 1178.61601 1178.61492 0.93 0.00055 0/0 0 0 35270576 HCD 30 MS2 3.233714 404.2 42.271 33.1018 7036 7036 7031 QEplus033719.raw F4 376.9 407.8 439.9 321.8 503 375.9 174 3.26 1 FALSE 1.14E-05 4.96E-06 1.105 -250 18346 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIHDADSEAR [K].gIHDADSEAR.[I] N-Term(TMT6plex) 17 E9Q6L0 CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2 E9Q6L0; Q80TV8-2; A0A087WNW8; Q80TV8; A0A087WQ31; A0A087WRK0; E9QNY9; E9QKH0; A5D6Q8; A0A0A6YXZ1; A0A087WQ95; B2RY22; A0A087WS18; A0A087WP42; A0A087WRE8; J3QP81; A0A087WQF1 CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; Isoform 2 of CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; Clasp1 protein OS=Mus musculus OX=10090 GN=Clasp1 PE=2 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; Clasp1 protein OS=Mus musculus OX=10090 GN=Clasp1 PE=2 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2 0 3 3 0.7092 0 1 1 1 433.88818 1299.65 1299.64906 0.72 0.00031 0/0 0 0 13461259 HCD 30 MS2 31.84447 291.5 87.918 33.1041 7037 7037 7031 QEplus033719.raw F4 319.9 247.2 315.2 238 367.3 261.2 88 4.47 1 FALSE 1.14E-05 9.54E-07 1.241 -250 18351 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMEADERDR [K].eMEADERDR.[K] N-Term(TMT6plex) 2 B2RY56 RNA-binding protein 25 OS=Mus musculus OX=10090 GN=Rbm25 PE=1 SV=2 B2RY56; S4R2B0 RNA-binding protein 25 OS=Mus musculus OX=10090 GN=Rbm25 PE=1 SV=2; RNA-binding protein 25 (Fragment) OS=Mus musculus OX=10090 GN=Rbm25 PE=1 SV=1 1 3 3 0.553 0 1 1 1 460.55219 1379.642 1379.64226 -0.19 -0.00009 0/0 0 0 11182541 HCD 30 MS2 28.97766 599.5 110 33.1066 7038 7038 7031 QEplus033719.raw F4 669.7 550 664.8 479.8 666 566.5 33 3.49 1 FALSE 1.14E-05 4.50E-06 1.113 -250 18376 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDPNNYRPR [R-].rDPNNYRPR.[I] N-Term(TMT6plex) 5 Q6NXX7 Abce1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1 Q6NXX7; Q8C2N8; Q3TJM9; Q3UHY8; Q3TIU8 Abce1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1 1 4 4 0.635 0 1 1 1 354.94727 1416.76723 1416.76576 1.04 0.00037 0/0 0 0 8250256 HCD 30 MS2 23.0542 158.8 64.959 33.1136 7041 7041 7031 QEplus033719.raw F4 174.1 123.1 172.3 122.5 157.1 203.5 321 4.11 1 FALSE 1.14E-05 0.0004301 0.735 -250 18388 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VCASDTR [R].vcASDTR.[A] N-Term(TMT6plex); C2(Carbamidomethyl) 3 A0JLQ7 Pcid2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pcid2 PE=2 SV=2 A0JLQ7; Q8BNM3; Q8BFV2 Pcid2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pcid2 PE=2 SV=2; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Pcid2 PE=2 SV=1; PCI domain-containing protein 2 OS=Mus musculus OX=10090 GN=Pcid2 PE=1 SV=1 0 2 2 0.5588 0 1 1 1 519.26587 1037.52446 1037.52471 -0.24 -0.00012 0/0 0 0 5538803.5 HCD 30 MS2 12.4674 291.2 110 33.1234 7044 7044 7042 QEplus033719.raw F4 314.7 246.3 340.5 225.5 357.9 262.2 88 2.38 1 FALSE 0.001894 0.03232 0.205 -250 18398 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGSAAQTR [R].vGSAAQTR.[A] N-Term(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 0 2 2 0.5221 0 1 1 1 509.79593 1018.58458 1018.58427 0.3 0.00015 0/0 0 0 16664135 HCD 30 MS2 15.86402 823.9 110 33.1281 7046 7046 7042 QEplus033719.raw F4 1425.8 461.6 881.2 901 503.8 770.2 319 2.72 1 FALSE 1.14E-05 0.000207 0.796 -250 18407 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRAEDLNTR [R].sRAEDLNTR.[V] N-Term(TMT6plex) 2 D3YZZ5 Transmembrane p24-trafficking protein 7 OS=Mus musculus OX=10090 GN=Tmed7 PE=1 SV=1 E9Q7G1; D3YZZ5 Transmembrane p24-trafficking protein 7 OS=Mus musculus OX=10090 GN=Tmed7 PE=1 SV=1; Transmembrane p24-trafficking protein 7 OS=Mus musculus OX=10090 GN=Tmed7 PE=1 SV=1 1 2 2 0.378 0 1 1 1 645.85205 1290.69682 1290.69634 0.37 0.00024 0/0 0 0 8771976 HCD 30 MS2 23.04126 105.4 110 33.1331 7048 7048 7042 QEplus033719.raw F4 104.4 92.2 111.5 97.2 118.6 108.4 319 2.54 1 FALSE 0.0001813 0.003967 0.528 -250 18415 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDYSTAQR [K].dDYSTAQR.[I] N-Term(TMT6plex) 3 A0JLQ7 Pcid2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pcid2 PE=2 SV=2 A0JLQ7; Q8BNM3; Q8BFV2 Pcid2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pcid2 PE=2 SV=2; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Pcid2 PE=2 SV=1; PCI domain-containing protein 2 OS=Mus musculus OX=10090 GN=Pcid2 PE=1 SV=1 0 2 2 0.5833 0 1 1 1 592.79248 1184.57768 1184.5745 2.69 0.00159 0/0 0 0 4832754 HCD 30 MS2 37.42539 272.4 110 33.1356 7049 7049 7042 QEplus033719.raw F4 264.3 240.4 295.6 209.7 328.4 295.8 56 2.88 1 FALSE 3.35E-05 0.001174 0.648 -250 18423 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQQQAATSESSNQSETSVR [R].rQQQAATSESSNQSETSVR.[R] N-Term(TMT6plex) 3 Q4JG03 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1 Q4JG03; Q7TMY8; A2AFQ0 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=5; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=1 1 3 3 0.821 0 1 1 1 775.05402 2323.1475 2323.14356 1.69 0.00131 0/0 0 0 2282167 HCD 30 MS2 0 12.6 110 33.1381 7050 7050 7042 QEplus033719.raw F4 13.6 9.4 17 11.3 11.1 13.4 216 6.37 1 FALSE 1.14E-05 6.31E-16 4.355 -250 18431 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GENGTLSR [K].gENGTLSR.[E] N-Term(TMT6plex) 2 P61022 Calcineurin B homologous protein 1 OS=Mus musculus OX=10090 GN=Chp1 PE=1 SV=2 P61022; B0R091 Calcineurin B homologous protein 1 OS=Mus musculus OX=10090 GN=Chp1 PE=1 SV=2; Calcineurin B homologous protein 1 OS=Mus musculus OX=10090 GN=Chp1 PE=1 SV=1 0 2 2 0.2635 0 1 1 1 531.79211 1062.57695 1062.5741 2.68 0.00142 0/0 0 0 3412331 HCD 30 MS2 48.71406 364.1 110 33.1406 7051 7051 7042 QEplus033719.raw F4 411.2 312.9 384 325.6 414.9 336.2 263 1.48 1 FALSE 0.0004888 0.007681 0.445 -250 18440 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQPPSSAASR [R].aQPPSSAASR.[V] N-Term(TMT6plex) 18 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 D6RCH1; D3YWY7; Q3UZD9; Q8BUW8; Q6NZJ6-2; A0PJB5; E9Q9E1; D3YWM1; Q3UQI5; Q3UYM6; E9Q770; D3YWC6; E9PVC5; E9PVC6; A0A338P758; D3Z439; Q6NZJ6; Q3UTK0 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 0 2 2 0.2975 0 1 1 1 600.83142 1200.65557 1200.65342 1.79 0.00107 0/0 0 0 1185817.625 HCD 30 MS2 19.78522 80.8 110 33.1432 7052 7052 7042 QEplus033719.raw F4 92.5 66 86.5 68.7 82.5 88.5 206 2.42 1 FALSE 0.001473 0.0214 0.27 -250 18448 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVQADQER [K].aVQADQER.[E] N-Term(TMT6plex) 1 Q922Q8 Leucine-rich repeat-containing protein 59 OS=Mus musculus OX=10090 GN=Lrrc59 PE=1 SV=1 Q922Q8 Leucine-rich repeat-containing protein 59 OS=Mus musculus OX=10090 GN=Lrrc59 PE=1 SV=1 0 2 2 0.067 0 1 1 1 573.31018 1145.61308 1145.61122 1.63 0.00093 0/0 0 0 2300227.25 HCD 30 MS2 21.59046 174.8 110 33.1505 7054 7054 7053 QEplus033719.raw F4 169.8 160.8 187.9 194.2 148.3 187.8 188 2.24 1 FALSE 1.14E-05 0.000508 0.721 -250 18464 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDDDEEEAARER [R].nDDDEEEAARER.[R] N-Term(TMT6plex) 9 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; E9QA15; E9Q0M9; D3Z6I7; S4R1T7; E9Q9F3; Q7TMN5; E9QA16; Q3TUS1 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Cald1 protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1 1 2 2 0.8201 0 1 1 1 839.38049 1677.75371 1677.75135 1.41 0.00118 0/0 0 0 5625196 HCD 30 MS2 0 87.7 110 33.16 7058 7058 7053 QEplus033719.raw F4 82.3 93.6 102.4 46.8 139.2 62 27 4.28 1 FALSE 1.14E-05 1.44E-06 1.207 -250 18492 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAQQRPEEVR [K].aAQQRPEEVR.[D] N-Term(TMT6plex) 11 Q3THP1 Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1 A0A494B918; Q8BYF3; Q99KK7; Q3THP1; Q6NXZ0; Q3UDD5; Q3UDF3; Q3UDY7; A0A494BBC1; Q8BU29; A0A494BBB3 Dipeptidyl peptidase 3 (Fragment) OS=Mus musculus OX=10090 GN=Dpp3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=1 SV=2; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=1 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 (Fragment) OS=Mus musculus OX=10090 GN=Dpp3 PE=1 SV=1 0 2 2 0.4783 0 1 1 1 706.89569 1412.78411 1412.78074 2.38 0.00168 0/0 0 0 2067625.875 HCD 30 MS2 0 43.5 110 33.17 7062 7062 7053 QEplus033719.raw F4 45.6 37.5 41.9 35 43.6 57.2 332 2.53 1 FALSE 0.001001 0.01326 0.355 -250 18495 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIHDADSEAR [K].gIHDADSEAR.[I] N-Term(TMT6plex) 17 E9Q6L0 CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2 E9Q6L0; Q80TV8-2; A0A087WNW8; Q80TV8; A0A087WQ31; A0A087WRK0; E9QNY9; E9QKH0; A5D6Q8; A0A0A6YXZ1; A0A087WQ95; B2RY22; A0A087WS18; A0A087WP42; A0A087WRE8; J3QP81; A0A087WQF1 CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; Isoform 2 of CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; Clasp1 protein OS=Mus musculus OX=10090 GN=Clasp1 PE=2 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; Clasp1 protein OS=Mus musculus OX=10090 GN=Clasp1 PE=2 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2 0 2 2 0.7049 0 1 1 1 650.32678 1299.64629 1299.64906 -2.13 -0.00139 0/0 0 0 904064.3125 HCD 30 MS2 70.8689 85.7 110 33.1725 7063 7063 7053 QEplus033719.raw F4 85.2 60.9 90.7 81.4 87.3 108.5 83 3.66 1 FALSE 1.14E-05 3.33E-08 1.518 -250 18501 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHYAYDCHR [K].gHYAYDcHR.[Y] N-Term(TMT6plex); C7(Carbamidomethyl) 8 Q8BL97 Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1 Q8BL97; A0A3Q4L393; Q8BL97-4; A0A3Q4L335; A0A3Q4EGP0; Q8BL97-3; A0A3Q4EH04; Q3THA6 Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Serine/arginine-rich-splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Isoform 4 of Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7; Serine/arginine-rich-splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Serine/arginine-rich-splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Isoform 3 of Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7; Serine/arginine-rich-splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Srsf7 PE=2 SV=1 0 2 2 0.6438 0 1 1 1 704.32538 1407.64348 1407.64253 0.67 0.00047 0/0 0 0 980102.3125 HCD 30 MS2 0 30.2 110 33.1798 7065 7065 7064 QEplus033719.raw F4 30.5 30.6 27.6 21.8 38.8 31.7 39 2.92 1 FALSE 1.14E-05 4.04E-05 0.932 -250 18507 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AINQAGSR [K].aINQAGSR.[SN] N-Term(TMT6plex) 10 O70583 E3 ubiquitin-protein ligase Midline-1 OS=Mus musculus OX=10090 GN=Mid1 PE=1 SV=2 O70583-3; O70583; O70583-2; Q3TVH5; B1AVF5; Q6PD02; B1AUZ9; B1AV01; B1AVF4; Q9QUS6 Isoform 3 of E3 ubiquitin-protein ligase Midline-1 OS=Mus musculus OX=10090 GN=Mid1; E3 ubiquitin-protein ligase Midline-1 OS=Mus musculus OX=10090 GN=Mid1 PE=1 SV=2; Isoform 2 of E3 ubiquitin-protein ligase Midline-1 OS=Mus musculus OX=10090 GN=Mid1; E3 ubiquitin-protein ligase Midline-1 OS=Mus musculus OX=10090 GN=Mid1 PE=2 SV=1; RING-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Mid2 PE=1 SV=1; E3 ubiquitin-protein ligase Midline-1 OS=Mus musculus OX=10090 GN=Mid1 PE=1 SV=1; E3 ubiquitin-protein ligase Midline-1 OS=Mus musculus OX=10090 GN=Mid1 PE=1 SV=1; E3 ubiquitin-protein ligase Midline-1 OS=Mus musculus OX=10090 GN=Mid1 PE=1 SV=1; RING-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Mid2 PE=1 SV=1; Probable E3 ubiquitin-protein ligase MID2 OS=Mus musculus OX=10090 GN=Mid2 PE=2 SV=2 0 2 2 0.0833 0 1 1 1 523.3017 1045.59612 1045.59517 0.9 0.00047 0/0 0 0 13913336 HCD 30 MS2 12.0399 399.4 110 33.1823 7066 7066 7064 QEplus033719.raw F4 465.6 257.2 439.1 421 379.3 433.9 317 2.16 1 FALSE 1.14E-05 0.0001039 0.854 -250 18521 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAQQRPEEVR [K].aAQQRPEEVR.[D] N-Term(TMT6plex) 11 Q3THP1 Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1 A0A494B918; Q8BYF3; Q99KK7; Q3THP1; Q6NXZ0; Q3UDD5; Q3UDF3; Q3UDY7; A0A494BBC1; Q8BU29; A0A494BBB3 Dipeptidyl peptidase 3 (Fragment) OS=Mus musculus OX=10090 GN=Dpp3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=1 SV=2; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=1 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 (Fragment) OS=Mus musculus OX=10090 GN=Dpp3 PE=1 SV=1 0 3 3 0.5664 0 1 1 1 471.59869 1412.78153 1412.78074 0.56 0.00026 0/0 0 0 43461416 HCD 30 MS2 3.578022 318.8 32.064 33.1868 7068 7068 7064 QEplus033719.raw F4 305.8 246.5 348.5 301.5 287.4 422.9 297 3.39 1 FALSE 5.44E-05 0.001786 0.609 -250 18534 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDRVPPSR [R].qDRVPPSR.[N] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 1 3 3 0.4585 0 1 1 1 395.23016 1183.67594 1183.67449 1.23 0.00048 0/0 0 0 26240068 HCD 30 MS2 33.88377 312.9 40.979 33.1913 7070 7070 7064 QEplus033719.raw F4 363.3 256.5 370.2 339.4 258.9 288.9 230 2.77 3 FALSE 1.14E-05 5.67E-05 0.904 -250 18541 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NESGIER [K].nESGIER.[C] N-Term(TMT6plex) 5 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.3487 0 1 1 1 517.27795 1033.54863 1033.54755 1.04 0.00054 0/0 0 0 18762048 HCD 30 MS2 18.49137 553.5 67.324 33.1936 7071 7071 7064 QEplus033719.raw F4 634.2 176.9 461.2 987 261.4 800.4 191 2.38 2 FALSE 0.0004191 0.007416 0.45 -250 18563 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPERPPAR [R].tPERPPAR.[I] N-Term(TMT6plex) 1 Q1XH17 Tripartite motif-containing protein 72 OS=Mus musculus OX=10090 GN=Trim72 PE=1 SV=1 Q1XH17 Tripartite motif-containing protein 72 OS=Mus musculus OX=10090 GN=Trim72 PE=1 SV=1 0 3 3 0.4644 0 1 1 1 384.8945 1152.66895 1152.66867 0.24 0.00009 0/0 0 0 45837236 HCD 30 MS2 17.27053 257.8 25.179 33.2082 7076 7076 7075 QEplus033719.raw F4 365.5 48.6 201.4 451.7 60.5 418.9 275 2.95 1 FALSE 0.0008718 0.01202 0.373 -250 18569 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTEEGSSEDRVGQR [R].dTEEGSSEDRVGQR.[G] N-Term(TMT6plex) 4 B1ARU4 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 B1ARU4; E9QA63; Q9QXZ0; E9PVY8 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 1 3 3 0.5941 0 1 1 1 598.62103 1793.84854 1793.84631 1.24 0.00074 0/0 0 0 4910310.5 HCD 30 MS2 0 101.1 110 33.2107 7077 7077 7075 QEplus033719.raw F4 112.1 55.5 143.8 90.9 59.8 144.6 95 3.72 1 FALSE 1.14E-05 1.49E-10 1.964 -250 18586 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGGAQNR [K].iGGAQNR.[N] N-Term(TMT6plex) 1 P34884 Macrophage migration inhibitory factor OS=Mus musculus OX=10090 GN=Mif PE=1 SV=2 P34884 Macrophage migration inhibitory factor OS=Mus musculus OX=10090 GN=Mif PE=1 SV=2 0 2 2 0.3386 0 1 1 1 472.77771 944.54814 944.54749 0.69 0.00032 0/0 0 0 66636396 HCD 30 MS2 28.3768 689.6 23.07 33.2152 7079 7079 7075 QEplus033719.raw F4 1348.4 403.2 678 679.8 375.1 653.3 151 1.89 1 FALSE 0.002853 0.05578 0.126 -250 18596 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGAPTAGPGSR [R].sGAPTAGPGSR.[G] N-Term(TMT6plex) 6 P80315 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3 G3UYW5; P80315; G3UXF3; Q3TII0; G5E839; G3UXG2 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1 0 2 2 0.7183 0 1 1 1 593.82288 1186.63848 1186.63777 0.6 0.00035 0/0 0 0 53219176 HCD 30 MS2 5.414374 493.6 29.895 33.2175 7080 7080 7075 QEplus033719.raw F4 504.7 390.6 540.2 418.2 555.4 552.7 192 3.23 1 FALSE 1.14E-05 2.72E-07 1.345 -250 18627 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CMCTCNR [R].cMcTcNR.[C] N-Term(TMT6plex); C1(Carbamidomethyl); C3(Carbamidomethyl); C5(Carbamidomethyl) 4 A0A494BBK2 Mitochondrial Rho GTPase 1 (Fragment) OS=Mus musculus OX=10090 GN=Rhot1 PE=1 SV=1 A0A494BBK2; Q8BG51-4; Q8BG51-3; F7ASU3 Mitochondrial Rho GTPase 1 (Fragment) OS=Mus musculus OX=10090 GN=Rhot1 PE=1 SV=1; Isoform 4 of Mitochondrial Rho GTPase 1 OS=Mus musculus OX=10090 GN=Rhot1; Isoform 3 of Mitochondrial Rho GTPase 1 OS=Mus musculus OX=10090 GN=Rhot1; Mitochondrial Rho GTPase 1 (Fragment) OS=Mus musculus OX=10090 GN=Rhot1 PE=1 SV=1 0 2 2 0.8182 0 1 1 1 615.7569 1230.50652 1230.50492 1.3 0.0008 0/0 0 0 1462056.5 HCD 30 MS2 18.24872 116.8 110 33.2297 7085 7085 7075 QEplus033719.raw F4 138.2 89.7 126 107.8 119.4 119.9 5 2.09 1 FALSE 0.002056 0.03669 0.187 -250 18632 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGLDDDRGPR [R].rGLDDDRGPR.[R] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 2 3 3 0.6023 0 1 1 1 462.58658 1385.74518 1385.74469 0.35 0.00016 0/0 0 0 24267150 HCD 30 MS2 6.577722 211.2 52.105 33.2371 7087 7087 7086 QEplus033719.raw F4 205 161.2 233.5 179.8 259.1 228.7 275 3.47 1 FALSE 1.14E-05 1.82E-06 1.188 -250 18636 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DPAAEAR [K].dPAAEAR.[M] N-Term(TMT6plex) 5 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q99LY0; Q91YQ5; Q5RKP4; Q3U900; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 0 2 2 0.1423 0 1 1 1 479.76151 958.51573 958.51553 0.22 0.0001 0/0 0 0 6504073.5 HCD 30 MS2 45.0112 364.2 110 33.2396 7088 7088 7086 QEplus033719.raw F4 501.5 218.6 348.4 341.9 374.5 400.4 75 2.46 1 FALSE 0.001177 0.01589 0.322 -250 18642 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYGGGGYGR [R].rYGGGGYGR.[R] N-Term(TMT6plex) 2 Q8C671 Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=2 SV=1 Q8C671; Q62093 Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=2 SV=1; Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=1 SV=4 1 3 3 0.6657 0 1 1 1 391.21088 1171.61808 1171.61697 0.94 0.00037 0/0 0 0 17766160 HCD 30 MS2 36.17539 274.1 55.072 33.2441 7090 7090 7086 QEplus033719.raw F4 285.9 262 325.7 222.6 310.7 237.6 115 3.59 1 FALSE 1.14E-05 0.0006268 0.703 -250 18651 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIQEERDER [K].qIQEERDER.[H] N-Term(TMT6plex) 4 Q6NV83 U2 snRNP-associated SURP motif-containing protein OS=Mus musculus OX=10090 GN=U2surp PE=1 SV=3 Q6NV83; A0A087WRG2; Q6NV83-3; Q6NV83-2 U2 snRNP-associated SURP motif-containing protein OS=Mus musculus OX=10090 GN=U2surp PE=1 SV=3; U2 snRNP-associated SURP motif-containing protein OS=Mus musculus OX=10090 GN=U2surp PE=1 SV=1; Isoform 3 of U2 snRNP-associated SURP motif-containing protein OS=Mus musculus OX=10090 GN=U2surp; Isoform 2 of U2 snRNP-associated SURP motif-containing protein OS=Mus musculus OX=10090 GN=U2surp 1 3 3 0.4048 0 1 1 1 477.91797 1431.73935 1431.73894 0.29 0.00014 0/0 0 0 7804188.5 HCD 30 MS2 7.999178 344.2 110 33.249 7092 7092 7086 QEplus033719.raw F4 356.5 357.9 358.5 238.2 462.2 291.6 227 3.31 1 FALSE 1.14E-05 0.0002321 0.787 -250 18669 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVGAEER [K].dVGAEER.[G] N-Term(TMT6plex) 3 Q3U422 Complex I-9kD OS=Mus musculus OX=10090 GN=Ndufv3 PE=1 SV=1 Q3U422; Q3U4K3; Q91WP8 Complex I-9kD OS=Mus musculus OX=10090 GN=Ndufv3 PE=1 SV=1; Complex I-9kD (Fragment) OS=Mus musculus OX=10090 GN=Ndufv3 PE=2 SV=1; Complex I-9kD OS=Mus musculus OX=10090 GN=Ndufv3 PE=2 SV=1 0 2 2 0.2283 0 1 1 1 502.76437 1004.52147 1004.521 0.46 0.00023 0/0 0 0 4876333 HCD 30 MS2 41.0949 610.2 110 33.2565 7095 7095 7086 QEplus033719.raw F4 676.3 454 614 593 759.5 564.2 129 2.19 1 FALSE 0.007001 0.1108 -0.022 -250 18696 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSEGPQGVR [R].gSEGPQGVR.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 2 2 0.4248 0 1 1 1 558.30463 1115.60198 1115.60065 1.19 0.00066 0/0 0 0 210739376 HCD 30 MS2 3.799246 324.8 7.227 33.2711 7100 7100 7097 QEplus033719.raw F4 299 251 333.2 345.2 344.6 375.6 141 2.66 1 FALSE 1.14E-05 6.27E-05 0.896 -250 18702 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQLSSGER [R].sQLSSGER.[C] N-Term(TMT6plex) 1 Q3UGS4 Mapk-regulated corepressor-interacting protein 1 OS=Mus musculus OX=10090 GN=Mcrip1 PE=1 SV=1 Q3UGS4 Mapk-regulated corepressor-interacting protein 1 OS=Mus musculus OX=10090 GN=Mcrip1 PE=1 SV=1 0 2 2 0.5661 0 1 1 1 546.79669 1092.58611 1092.58467 1.32 0.00072 0/0 0 0 41928740 HCD 30 MS2 19.67056 511 42.542 33.2756 7102 7102 7097 QEplus033719.raw F4 520.4 398.9 540.5 419.9 711.6 475 229 2.95 1 FALSE 1.14E-05 0.0001139 0.846 -250 18711 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSHGVAQVR [R].dSHGVAQVR.[F] N-Term(TMT6plex) 2 Q5BLJ7 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1 Q921R2; Q5BLJ7 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1; 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1 0 3 3 0.6382 0 1 1 1 399.88962 1197.6543 1197.65375 0.46 0.00018 0/0 0 0 38035272 HCD 30 MS2 4.432914 193.2 35.172 33.2779 7103 7103 7097 QEplus033719.raw F4 234 162.9 202.6 157 202.7 199.8 211 3.87 1 FALSE 1.14E-05 1.05E-08 1.613 -250 18718 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAADGYQR [K].eAADGYQR.[C] N-Term(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 2 2 0.5932 0 1 1 1 569.78864 1138.56999 1138.56902 0.86 0.00049 0/0 0 0 31959630 HCD 30 MS2 10.79629 566.1 39.122 33.2801 7104 7104 7097 QEplus033719.raw F4 663.2 466.2 604.5 470.3 620.2 572.3 94 3.22 1 FALSE 1.14E-05 0.0002228 0.79 -250 18724 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHLGNVHDQDN [K].sHLGNVHDQDN.[-] N-Term(TMT6plex) 4 Q6P8I4 PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1 F8WI88; D3YWA4; Q3KQH9; Q6P8I4 PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1; PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1; PEST proteolytic signal-containing nuclear protein (Fragment) OS=Mus musculus OX=10090 GN=Pcnp PE=2 SV=1; PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1 0 3 3 0.7956 0 1 1 1 488.90637 1464.70456 1464.70288 1.15 0.00056 0/0 0 0 26480564 HCD 30 MS2 32.58872 335.9 71.74 33.2824 7105 7105 7097 QEplus033719.raw F4 387.4 198.3 338.4 430.6 283.6 377.2 94 4.11 1 FALSE 1.14E-05 1.53E-07 1.392 -250 18758 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETHQDELGR [K].eTHQDELGR.[M] N-Term(TMT6plex) 2 B2RTE5 Coiled-coil domain containing 102A OS=Mus musculus OX=10090 GN=Ccdc102a PE=1 SV=1 B2RTE5; A4FUJ5 Coiled-coil domain containing 102A OS=Mus musculus OX=10090 GN=Ccdc102a PE=1 SV=1; Ccdc102a protein (Fragment) OS=Mus musculus OX=10090 GN=Ccdc102a PE=2 SV=1 0 3 3 0.5546 0 1 1 1 438.56058 1313.66718 1313.66471 1.88 0.00082 0/0 0 0 9793676 HCD 30 MS2 58.58728 442.1 110 33.297 7110 7110 7108 QEplus033719.raw F4 693.3 299.5 402.6 334.7 564.9 357.5 118 3.48 1 FALSE 0.0002119 0.004307 0.519 -250 18776 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRLEEAGR [R].qRLEEAGR.[A] N-Term(TMT6plex) 2 Q3U5N4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Adprh PE=1 SV=1 Q9CTF5; Q3U5N4 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Adprh PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Adprh PE=1 SV=1 1 3 3 0.2857 0 1 1 1 396.56168 1187.67047 1187.6694 0.9 0.00036 0/0 0 0 29181960 HCD 30 MS2 47.7931 261.5 23.661 33.3015 7112 7112 7108 QEplus033719.raw F4 284.1 180.3 262.1 251.2 284.5 306.6 316 2.87 1 FALSE 0.0008805 0.01228 0.369 -250 18784 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNENIQR [R].tNENIQR.[F] N-Term(TMT6plex) 3 E9PYG6 RAS p21 protein activator 1 OS=Mus musculus OX=10090 GN=Rasa1 PE=1 SV=1 E9PYG6; Q91YX7; Q3V090 RAS p21 protein activator 1 OS=Mus musculus OX=10090 GN=Rasa1 PE=1 SV=1; RAS p21 protein activator 1 OS=Mus musculus OX=10090 GN=Rasa1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rasa1 PE=2 SV=1 0 2 2 0.1411 0 1 1 1 552.30469 1103.6021 1103.60065 1.31 0.00072 0/0 0 0 16994734 HCD 30 MS2 12.09489 669.8 101.458 33.3039 7113 7113 7108 QEplus033719.raw F4 667.9 595.8 716.9 565.5 839.3 633.6 252 2.41 1 FALSE 0.001506 0.02205 0.265 -250 18794 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSHGVAQVR [R].dSHGVAQVR.[F] N-Term(TMT6plex) 2 Q5BLJ7 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1 Q921R2; Q5BLJ7 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1; 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1 0 2 2 0.4849 0 1 1 1 599.33075 1197.65422 1197.65375 0.39 0.00024 0/0 0 0 14564003 HCD 30 MS2 22.85344 592.4 110 33.3064 7114 7114 7108 QEplus033719.raw F4 595.9 521.9 668.1 509.1 632.1 627.4 211 2.99 1 FALSE 1.14E-05 1.60E-06 1.199 -250 18801 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSYTPTTSR [R].hSYTPTTSR.[S] N-Term(TMT6plex) 18 E9Q9C7 Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1 E9Q030; E9Q9C7; E9QK41; E9Q9D2; Q8K4G5-3; Q8K4G5-2; E9Q9D1; Q8K4G5; Q3TAG5; B9EIV0; E9Q9C4; E9Q9C1; E9Q9C0; Q8K4G5-4; Q3UP03; E9Q9Q7; Q8K278; E9Q9C2 Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Isoform 3 of Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1; Isoform 2 of Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ablim1 PE=2 SV=1; Ablim1 protein OS=Mus musculus OX=10090 GN=Ablim1 PE=2 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Isoform 4 of Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ablim1 PE=2 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Ablim1 protein OS=Mus musculus OX=10090 GN=Ablim1 PE=2 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1 0 3 3 0.5894 0 1 1 1 426.89334 1278.66547 1278.66398 1.17 0.0005 0/0 0 0 10809422 HCD 30 MS2 24.89512 184.7 98.369 33.3087 7115 7115 7108 QEplus033719.raw F4 241.6 109.7 189 201.1 152.2 214.5 221 3.58 1 FALSE 1.14E-05 0.0002227 0.79 -250 18809 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLQEQQR [R].qLQEQQR.[Q] N-Term(TMT6plex) 11 J3QNM3 Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1 J3QNM3; Q03173-3; A0A0A6YW06; Q03173-4; Q03173; Q03173-6; A0A0A6YXC8; E9QKQ9; Q03173-5; E9QLZ9; E9QKR1 Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Isoform 2 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Isoform 3 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=2; Isoform 6 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Isoform 4 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=2 0 2 2 0.5018 0 1 1 1 579.82538 1158.64348 1158.64285 0.54 0.00031 0/0 0 0 10561281 HCD 30 MS2 8.915192 517.8 110 33.3112 7116 7116 7108 QEplus033719.raw F4 616.2 303.3 588.1 478.8 570.4 550.3 295 2.77 1 FALSE 0.0009633 0.01298 0.359 -250 18817 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENLGGNSR [RK].eNLGGNSR.[T] N-Term(TMT6plex) 20 A0A5F8MPF0 Kinesin-like protein KIF1B OS=Mus musculus OX=10090 GN=Kif1b PE=1 SV=1 A0A5F8MPF0; Q6TA13; Q3UH16; A2AH75; Q6P5H4; Q8VI89; P33173; Q60575; E9Q9G6; Q6A011; Q3UY61; Q5DTN3; E9Q9B0; E9QAN4; G3UW47; O35071; A0A087WQE8; Q60575-3; Q60575-2; Q3V3Y9 Kinesin-like protein KIF1B OS=Mus musculus OX=10090 GN=Kif1b PE=1 SV=1; Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Kif1a PE=2 SV=1; Kinesin-like protein KIF1B OS=Mus musculus OX=10090 GN=Kif1b PE=1 SV=1; Kif1a protein OS=Mus musculus OX=10090 GN=Kif1a PE=2 SV=1; Kinesin superfamily protein 1C OS=Mus musculus OX=10090 GN=Kif1c PE=2 SV=1; Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=2; Kinesin-like protein KIF1B OS=Mus musculus OX=10090 GN=Kif1b PE=1 SV=2; Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=1; MKIAA0706 protein (Fragment) OS=Mus musculus OX=10090 GN=Kif1c PE=2 SV=1; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif1b PE=2 SV=1; MKIAA4102 protein (Fragment) OS=Mus musculus OX=10090 GN=Kif1a PE=2 SV=1; Kinesin-like protein KIF1C OS=Mus musculus OX=10090 GN=Kif1c PE=1 SV=1; Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=1; Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=1; Kinesin-like protein KIF1C OS=Mus musculus OX=10090 GN=Kif1c PE=1 SV=2; Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=1; Isoform 3 of Kinesin-like protein KIF1B OS=Mus musculus OX=10090 GN=Kif1b; Isoform 2 of Kinesin-like protein KIF1B OS=Mus musculus OX=10090 GN=Kif1b; Kinesin-like protein OS=Mus musculus OX=10090 GN=Kif1c PE=1 SV=1 0 2 2 0.523 0 1 1 1 538.28912 1075.57097 1075.56935 1.51 0.00081 0/0 0 0 9354532 HCD 30 MS2 11.41717 441.7 110 33.3137 7117 7117 7108 QEplus033719.raw F4 504.8 322.3 463.4 408.6 534 416.9 274 3.04 1 FALSE 1.14E-05 0.0005853 0.709 -250 18830 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYGGGGYGR [R].rYGGGGYGR.[R] N-Term(TMT6plex) 2 Q8C671 Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=2 SV=1 Q8C671; Q62093 Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=2 SV=1; Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=1 SV=4 1 2 2 0.5196 0 1 1 1 586.31317 1171.61907 1171.61697 1.79 0.00105 0/0 0 0 7757904 HCD 30 MS2 0 195.5 110 33.3235 7120 7120 7119 QEplus033719.raw F4 187.4 203.3 224 147 229 182.5 115 1.79 1 FALSE 0.001632 0.02666 0.234 -250 18838 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRPETGRPRPK [R].sRPETGRPRPk.[-G] N-Term(TMT6plex); K11(TMT6plex) 6 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" A0A338P731; P63325; Q3UW83; A0A338P7K4; Q3U9P0; A0A3B2W864 "40S ribosomal protein S10 (Fragment) OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; S10_plectin domain-containing protein OS=Mus musculus OX=10090 GN=Rps10 PE=2 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 0 4 4 0.5526 0 1 1 1 435.51691 1739.0458 1739.04406 1 0.00044 0/0 0 0 14982798 HCD 30 MS2 9.352848 429.2 109.05 33.326 7121 7121 7119 QEplus033719.raw F4 459.4 370.4 477.6 362.1 476.3 429.2 284 3.33 2 FALSE 0.001591 0.02451 0.247 -250 18855 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVSSSSYRR [R].sVSSSSYRR.[M] N-Term(TMT6plex) 9 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; Q3TWV0; A2AKJ2; Q3U6S1; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 1 3 3 0.5491 0 1 1 1 419.89691 1257.67618 1257.67488 1.04 0.00043 0/0 0 0 16257976 HCD 30 MS2 20.94412 487.8 76.49 33.335 7125 7125 7119 QEplus033719.raw F4 539.2 504.6 516.2 315.7 746.9 304.4 178 3.77 2 FALSE 1.14E-05 5.48E-07 1.287 -250 18883 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSIADR [K].qSIADR.[Q] N-Term(TMT6plex) 2 E9Q6R7 Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 O08614; E9Q6R7 Cytoskeletal protein OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 0 2 2 0.2269 0 1 1 1 459.76361 918.51995 918.52061 -0.72 -0.00033 0/0 0 0 11554124 HCD 30 MS2 19.02595 587 75.655 33.3445 7129 7129 7119 QEplus033719.raw F4 739.7 401.5 653.9 571.7 562.3 592.8 201 2.16 1 FALSE 0.00459 0.08151 0.057 -250 18893 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEQDHSVR [K].mEQDHSVR.[R] N-Term(TMT6plex) 4 A1A553 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Stk10 PE=2 SV=1 A1A553; Q5DTS2; O55098; Q3UG53 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Stk10 PE=2 SV=1; Non-specific serine/threonine protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Stk10 PE=2 SV=1; Serine/threonine-protein kinase 10 OS=Mus musculus OX=10090 GN=Stk10 PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Stk10 PE=2 SV=1 0 3 3 0.6 0 1 1 1 410.87454 1230.60907 1230.60984 -0.62 -0.00025 0/0 0 0 2439306.75 HCD 30 MS2 49.3508 286.8 110 33.3518 7131 7131 7130 QEplus033719.raw F4 424.7 213.4 292.8 221.9 310.3 257.5 59 3.3 1 FALSE 0.0005556 0.00839 0.432 -250 18906 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIAEDADR [K].hIAEDADR.[K] N-Term(TMT6plex) 18 E9Q456; G5E8R2; G5E8R1; E9Q450 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 E9Q456; E9Q455; G5E8R2; E9Q453; G5E8R1; Q8BSH3; E9Q452; F8WID5; A2RRI1; E9Q454; E9Q448; E9Q450; G5E8R0; Q564G1; B7ZNL3; Q8BP43; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 0 3 3 0.3912 0 1 1 1 385.87033 1155.59644 1155.59557 0.76 0.00029 0/0 0 0 117205520 HCD 30 MS2 15.18806 161.9 9.534 33.3588 7134 7134 7130 QEplus033719.raw F4 196.1 85.5 150.9 199.4 139.6 199.8 120 3.4 4 FALSE 5.44E-05 0.001838 0.606 -250 18915 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HAEELER [K].hAEELER.[L] N-Term(TMT6plex) 2 Q8BMA6 Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=2 Q8BMA6; A2AAN2 Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=2; Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=1 0 3 3 0.6172 0 1 1 1 371.53528 1112.59128 1112.58975 1.37 0.00051 0/0 0 0 52996656 HCD 30 MS2 7.640613 133.4 24.954 33.361 7135 7135 7130 QEplus033719.raw F4 136.7 107.2 135.2 108 169.7 143.9 140 3.37 1 FALSE 1.14E-05 0.0004468 0.732 -250 18924 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIAEDADR [K].hIAEDADR.[K] N-Term(TMT6plex) 18 E9Q456; G5E8R2; G5E8R1; E9Q450 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 E9Q456; E9Q455; G5E8R2; E9Q453; G5E8R1; Q8BSH3; E9Q452; F8WID5; A2RRI1; E9Q454; E9Q448; E9Q450; G5E8R0; Q564G1; B7ZNL3; Q8BP43; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 0 2 2 0.413 0 1 1 1 578.30219 1155.59709 1155.59557 1.32 0.00076 0/0 0 0 37418444 HCD 30 MS2 3.530101 621.7 42.928 33.3633 7136 7136 7130 QEplus033719.raw F4 662.2 481.6 600.1 630.9 727.2 628.1 114 2.93 4 FALSE 1.14E-05 0.0003796 0.746 -250 18934 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REELER [KR].rEELER.[VAI] N-Term(TMT6plex) 14 P17879; Q3UL36 Heat shock 70 kDa protein 1B OS=Mus musculus OX=10090 GN=Hspa1b PE=1 SV=3;Arginine and glutamate-rich protein 1 OS=Mus musculus OX=10090 GN=Arglu1 PE=1 SV=2 O88688; A0A0G2JFF2; Q61696; Q6ZPN3; A0A0G2JDI2; E9PUB6; Q3TAI8; E9Q9T0; A1E2B8; Q6NSP6; B9EKY2; P17879; Q3UL36; Q61698 Heat shock protein 70 (Fragment) OS=Mus musculus OX=10090 GN=Hsp70.3 PE=3 SV=1; Fibrosin-like 1 OS=Mus musculus OX=10090 GN=Fbrsl1 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Mus musculus OX=10090 GN=Hspa1a PE=1 SV=2; MKIAA1545 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA1545 PE=4 SV=1; Fibrosin-like 1 OS=Mus musculus OX=10090 GN=Fbrsl1 PE=1 SV=5; Fibrosin-like 1 OS=Mus musculus OX=10090 GN=Fbrsl1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Fibrosin-like 1 OS=Mus musculus OX=10090 GN=Fbrsl1 PE=1 SV=1; Inducible heat shock protein 70 OS=Mus musculus OX=10090 PE=3 SV=1; 2410025L10Rik protein (Fragment) OS=Mus musculus OX=10090 GN=Fbrsl1 PE=2 SV=1; 2410025L10Rik protein OS=Mus musculus OX=10090 GN=Fbrsl1 PE=2 SV=1; Heat shock 70 kDa protein 1B OS=Mus musculus OX=10090 GN=Hspa1b PE=1 SV=3; Arginine and glutamate-rich protein 1 OS=Mus musculus OX=10090 GN=Arglu1 PE=1 SV=2; Heat shock protein (hsp68) (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 1 3 3 0.1853 0 1 1 2 354.20389 1060.59711 1060.59484 2.14 0.00076 0/0 0 0 20605056 HCD 30 MS2 27.88883 227.8 58.673 33.3655 7137 7137 7130 QEplus033719.raw F4 231.4 173.9 236.1 167.7 280.6 277.3 372 2.59 2 FALSE 0.001506 0.02206 0.264 -250 18942 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETEPVSR [R].eTEPVSR.[Q] N-Term(TMT6plex) 5 Q3UE92 Xaa-Pro aminopeptidase 1 OS=Mus musculus OX=10090 GN=Xpnpep1 PE=1 SV=1 Q3UE92; Q8VDK8; Q8BKH1; Q8BV43; Q3UKF5 Xaa-Pro aminopeptidase 1 OS=Mus musculus OX=10090 GN=Xpnpep1 PE=1 SV=1; Xpnpep1 protein (Fragment) OS=Mus musculus OX=10090 GN=Xpnpep1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Xpnpep1 PE=2 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Xpnpep1 PE=2 SV=1; X-prolyl aminopeptidase OS=Mus musculus OX=10090 GN=Xpnpep1 PE=2 SV=1 0 2 2 0.376 0 1 1 1 523.78833 1046.56938 1046.56795 1.37 0.00071 0/0 0 0 13335685 HCD 30 MS2 10.08335 670.2 110 33.368 7138 7138 7130 QEplus033719.raw F4 768 508.2 677.3 644 753.1 670.8 323 2.58 1 FALSE 0.0003496 0.006645 0.465 -250 18949 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPGVSEQQR [K].qPGVSEQQR.[H] N-Term(TMT6plex) 3 Q9R190 Metastasis-associated protein MTA2 OS=Mus musculus OX=10090 GN=Mta2 PE=1 SV=1 Q3TZP3; Q9R190; Q3UDZ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Mta2 PE=2 SV=1; Metastasis-associated protein MTA2 OS=Mus musculus OX=10090 GN=Mta2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Mta2 PE=2 SV=1 0 2 2 0.2787 0 1 1 1 629.34174 1257.6762 1257.67488 1.05 0.00066 0/0 0 0 9964942 HCD 30 MS2 22.05323 310.5 110 33.3706 7139 7139 7130 QEplus033719.raw F4 334.1 300.5 320.9 193.1 415.2 299.4 178 2.44 1 FALSE 1.14E-05 0.0001726 0.812 -250 18965 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYCTQSER [R].aYcTQSER.[H] N-Term(TMT6plex); C3(Carbamidomethyl) 2 Q8CFX1 GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus OX=10090 GN=H6pd PE=1 SV=2 Q8CFX1; A2A7A7 GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus OX=10090 GN=H6pd PE=1 SV=2; GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus OX=10090 GN=H6pd PE=1 SV=1 0 2 2 0.2753 0 1 1 1 622.30084 1243.59441 1243.59385 0.45 0.00028 0/0 0 0 9209234 HCD 30 MS2 53.51156 524.1 110 33.3829 7143 7143 7141 QEplus033719.raw F4 508.5 490.1 595.2 458.9 588.6 503.5 49 1.78 1 FALSE 5.44E-05 0.00173 0.612 -250 18982 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAAYAAR [R].sAAYAAR.[W] N-Term(TMT6plex) 8 Q99J57 S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=1 SV=1 A0A0U1RNT6; Q91X83; Q99J57; Q3UAP7; A0A0U1RNK6; Q3TSS0; Q3TED1; Q3UZA2 S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=1 SV=1; S-adenosylmethionine synthase isoform type-1 OS=Mus musculus OX=10090 GN=Mat1a PE=1 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=1 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=2 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=1 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=2 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=2 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=2 SV=1 0 2 2 0.0942 0 1 1 1 469.76688 938.52648 938.5257 0.83 0.00039 0/0 0 0 40394256 HCD 30 MS2 4.81959 581.9 35.363 33.3874 7145 7145 7141 QEplus033719.raw F4 627.1 405.3 651.9 583.1 682.6 541.7 34 2.23 1 FALSE 0.001533 0.02305 0.257 -250 19027 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHDLGHMMR [K].qHDLGHmMR.[C] N-Term(TMT6plex); M7(Oxidation) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.0595 0 1 1 1 457.22672 1369.66559 1369.66664 -0.77 -0.00035 0/0 0 0 5672981.5 HCD 30 MS2 30.01267 258.8 110 33.4018 7151 7151 7141 QEplus033719.raw F4 298.7 188.5 299.8 214.4 279.7 271.7 81 3.7 3 FALSE 1.14E-05 2.20E-05 0.982 -250 19036 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDPGPQGPR [K].gDPGPQGPR.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 2 2 0.533 0 1 1 1 555.30243 1109.59758 1109.59009 6.75 0.00375 0/0 0 0 10886713 HCD 30 MS2 42.67984 485.4 110 33.4091 7153 7153 7152 QEplus033719.raw F4 470.9 397.2 544.6 426.4 575.7 497.8 155 2.27 1 FALSE 0.001464 0.02124 0.271 -250 19041 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIENAR [K].qIENAR.[M] N-Term(TMT6plex) 4 Q3TW74 "C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1" Q3UZH3; A0A1W2P733; Q3TW74; Q922D8 "C-1-tetrahydrofolate synthase, cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=1 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=1 SV=4" 0 2 2 0.1841 0 1 1 1 480.27762 959.54796 959.54716 0.83 0.0004 0/0 0 0 17313070 HCD 30 MS2 14.19884 758 110 33.4116 7154 7154 7152 QEplus033719.raw F4 1031.4 590.1 827 666.7 732.1 701 151 2.39 1 FALSE 0.002071 0.03852 0.18 -250 19050 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAQPASAEPR [R].sAQPASAEPR.[Q] N-Term(TMT6plex) 4 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; F6SX70; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Talin-1 (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.6892 0 1 1 1 621.83606 1242.66484 1242.66398 0.69 0.00043 0/0 0 0 27378742 HCD 30 MS2 17.8577 433.8 50.917 33.4161 7156 7156 7152 QEplus033719.raw F4 458.5 392.5 484.5 339.4 536.3 391.9 186 3.25 1 FALSE 1.14E-05 9.21E-05 0.864 -250 19065 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRESEQAR [R].lRESEQAR.[A] N-Term(TMT6plex) 9 H3BJU7 Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1 H3BJU7; H3BKH9; Q60875; Q60875-5; H3BJX8; H3BJ40; H3BJ45; A0A2X0SFE2; Q60875-4 Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=4; Isoform 5 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=2; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Guanine nucleotide exchange factor H1 (Fragment) OS=Mus musculus OX=10090 GN=ARHGEF2 PE=4 SV=1; Isoform 4 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2 1 3 3 0.381 0 1 1 1 406.56445 1217.67881 1217.67996 -0.95 -0.00039 0/0 0 0 17799834 HCD 30 MS2 7.060157 313.5 80.368 33.4206 7158 7158 7152 QEplus033719.raw F4 328.4 232.4 334.5 277.3 396.6 311.8 341 3.57 1 FALSE 1.14E-05 0.0005303 0.717 -250 19079 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRPETGRPRPK [R].sRPETGRPRPk.[-G] N-Term(TMT6plex); K11(TMT6plex) 6 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" A0A338P731; P63325; Q3UW83; A0A338P7K4; Q3U9P0; A0A3B2W864 "40S ribosomal protein S10 (Fragment) OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; S10_plectin domain-containing protein OS=Mus musculus OX=10090 GN=Rps10 PE=2 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 0 3 3 0.1446 0 1 1 1 580.35321 1739.04508 1739.04406 0.59 0.00034 0/0 0 0 14618524 HCD 30 MS2 50.75706 380.2 67.977 33.4251 7160 7160 7152 QEplus033719.raw F4 418.9 257.1 408.4 359.7 432.4 404.9 289 1.66 2 FALSE 0.006674 0.1058 -0.009 -250 19103 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGGDSGNVDDDCER [K].aGGDSGNVDDDcER.[V] N-Term(TMT6plex); C12(Carbamidomethyl) 3 A0A1L1SV73 Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus OX=10090 GN=Usp47 PE=1 SV=1 Q8BY87-2; A0A1L1SV73; Q8BY87 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus OX=10090 GN=Usp47; Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus OX=10090 GN=Usp47 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus OX=10090 GN=Usp47 PE=1 SV=2 0 2 2 0.9349 0 1 1 1 848.35876 1695.71025 1695.70777 1.46 0.00124 0/0 0 0 7954359 HCD 30 MS2 0 177.9 110 33.4375 7164 7164 7163 QEplus033719.raw F4 179.2 169.1 187 151.4 218.2 162.8 6 4.61 1 FALSE 1.14E-05 7.55E-14 2.59 -250 19106 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AESVQGGETR [K].aESVQGGETR.[I] N-Term(TMT6plex) 9 A0A494B8X2 E3 ubiquitin-protein ligase RNF14 (Fragment) OS=Mus musculus OX=10090 GN=Rnf14 PE=1 SV=1 A0A494B8X2; Q9JI90; Q9JI90-2; A0A494BBK5; A0A494BAP8; A0A494B9N7; A0A494B9U7; A0A494B9F3; A0A494BBA9 E3 ubiquitin-protein ligase RNF14 (Fragment) OS=Mus musculus OX=10090 GN=Rnf14 PE=1 SV=1; E3 ubiquitin-protein ligase RNF14 OS=Mus musculus OX=10090 GN=Rnf14 PE=1 SV=2; Isoform 2 of E3 ubiquitin-protein ligase RNF14 OS=Mus musculus OX=10090 GN=Rnf14; E3 ubiquitin-protein ligase RNF14 (Fragment) OS=Mus musculus OX=10090 GN=Rnf14 PE=1 SV=1; E3 ubiquitin-protein ligase RNF14 (Fragment) OS=Mus musculus OX=10090 GN=Rnf14 PE=1 SV=1; E3 ubiquitin-protein ligase RNF14 (Fragment) OS=Mus musculus OX=10090 GN=Rnf14 PE=1 SV=1; E3 ubiquitin-protein ligase RNF14 (Fragment) OS=Mus musculus OX=10090 GN=Rnf14 PE=1 SV=1; E3 ubiquitin-protein ligase RNF14 (Fragment) OS=Mus musculus OX=10090 GN=Rnf14 PE=1 SV=1; E3 ubiquitin-protein ligase RNF14 (Fragment) OS=Mus musculus OX=10090 GN=Rnf14 PE=1 SV=1 0 2 2 0.236 0 1 1 1 631.83032 1262.65337 1262.65381 -0.35 -0.00022 0/0 0 0 7251242 HCD 30 MS2 0 228.5 110 33.44 7165 7165 7163 QEplus033719.raw F4 239.8 167.9 241.6 206.4 250.8 264.6 230 2.67 1 FALSE 1.14E-05 5.18E-07 1.292 -250 19111 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEVAESR [R].aEVAESR.[A] N-Term(TMT6plex) 4 A2AIM4; P58774-2 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 Q91VH3; A2AIM4; Q3SX28; P58774-2 Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 0 2 2 0.4291 0 1 1 1 495.77475 990.54222 990.54174 0.49 0.00024 0/0 0 0 27609936 HCD 30 MS2 15.73209 556.9 52.79 33.4422 7166 7166 7163 QEplus033719.raw F4 680 533.8 527.1 270.7 1015 314.8 238 2.54 2 TRUE 9.73E-05 0.002987 0.559 -250 19141 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQHIQQPR [R].tQHIQQPR.[K] N-Term(TMT6plex) 3 Q91XC8 Death-associated protein 1 OS=Mus musculus OX=10090 GN=Dap PE=1 SV=3 A0A087WR57; A0A087WRC6; Q91XC8 Death-associated protein 1 OS=Mus musculus OX=10090 GN=Dap PE=1 SV=1; Death-associated protein 1 OS=Mus musculus OX=10090 GN=Dap PE=1 SV=1; Death-associated protein 1 OS=Mus musculus OX=10090 GN=Dap PE=1 SV=3 0 3 3 0.3608 0 1 1 1 412.90524 1236.70118 1236.70103 0.11 0.00005 0/0 0 0 8363350 HCD 30 MS2 57.47896 307.6 110 33.4521 7170 7170 7163 QEplus033719.raw F4 329.7 241.2 322.7 263.2 369 319.8 414 4.24 1 FALSE 1.14E-05 5.66E-06 1.094 -250 19146 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAAPPSER [K].tAAPPSER.[V] N-Term(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 2 2 0.2195 0 1 1 1 529.2959 1057.58452 1057.58394 0.55 0.00029 0/0 0 0 8305310 HCD 30 MS2 0 487.6 110 33.4546 7171 7171 7163 QEplus033719.raw F4 606.4 123.1 473.2 738.3 157.4 827.4 112 2.46 1 FALSE 0.0005556 0.008381 0.432 -250 19167 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVMEHR [K].eVMEHR.[FL] N-Term(TMT6plex) 16 B1ARU4; F7ACR9; A0A571BGC6; Q3TY95 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1 F8WHG5; Q9QXZ0-3; B1ARU4; E9QA63; Q8CE74; E9QNP1; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8; Q3TY95 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1; Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Akt2 PE=2 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1 0 2 2 0.3122 0 1 1 1 515.2713 1029.53533 1029.53488 0.43 0.00022 0/0 0 0 3247495.75 HCD 30 MS2 50.64472 285 110 33.4669 7175 7175 7174 QEplus033719.raw F4 302.9 222.9 311.6 343 174.6 355.2 57 1.89 4 FALSE 0.005756 0.09647 0.016 -250 19178 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CCCVADR [R].cccVADR.[T] N-Term(TMT6plex); C1(Carbamidomethyl); C2(Carbamidomethyl); C3(Carbamidomethyl) 3 Q8K2B3 "Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Mus musculus OX=10090 GN=Sdha PE=1 SV=1" Q8K2B3; A0A1Y7VJ55; Q6IWE1 "Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Mus musculus OX=10090 GN=Sdha PE=1 SV=1; Flavoprotein subunit of complex II (Fragment) OS=Mus musculus OX=10090 GN=Sdha PE=1 SV=1; Succinate dehydrogenase subunit A (Fragment) OS=Mus musculus OX=10090 GN=Sdha PE=2 SV=1" 0 2 2 0.7943 0 1 1 1 585.25775 1169.50823 1169.5063 1.65 0.00096 0/0 0 0 12386048 HCD 30 MS2 0 560.4 110 33.4765 7179 7179 7174 QEplus033719.raw F4 590.4 440.7 566.5 580.4 545.7 638.5 8 2.82 1 FALSE 0.001395 0.0199 0.282 -250 19183 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IRGGSEGGCPR [R].iRGGSEGGcPR.[G] N-Term(TMT6plex); C9(Carbamidomethyl) 1 Q9ESP1 Stromal cell-derived factor 2-like protein 1 OS=Mus musculus OX=10090 GN=Sdf2l1 PE=1 SV=2 Q9ESP1 Stromal cell-derived factor 2-like protein 1 OS=Mus musculus OX=10090 GN=Sdf2l1 PE=1 SV=2 1 3 3 0.6818 0 1 1 1 458.90866 1374.71143 1374.71095 0.35 0.00016 0/0 0 0 5938937 HCD 30 MS2 21.499 301.6 110 33.4815 7181 7181 7174 QEplus033719.raw F4 377.3 241.5 306.8 245.8 335.9 302.5 196 3.96 1 FALSE 1.14E-05 4.89E-06 1.106 -250 19194 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSMDPSCTR [R].rSMDPScTR.[S] N-Term(TMT6plex); C7(Carbamidomethyl) 1 Q0VE46 Myadm protein OS=Mus musculus OX=10090 GN=Myadm PE=1 SV=1 Q0VE46 Myadm protein OS=Mus musculus OX=10090 GN=Myadm PE=1 SV=1 1 2 2 0.4198 0 1 1 1 669.82745 1338.64763 1338.64557 1.54 0.00103 0/0 0 0 2895855.5 HCD 30 MS2 17.55791 71.7 110 33.4891 7184 7184 7174 QEplus033719.raw F4 65.4 70.6 79 58.1 81.9 75.4 96 2.62 1 FALSE 0.0004292 0.007481 0.449 -250 19202 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQSATQPASPAR [K].sQSATQPASPAR.[S] N-Term(TMT6plex) 1 Q8K1E6 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Mus musculus OX=10090 GN=Alkbh3 PE=1 SV=1 Q8K1E6 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Mus musculus OX=10090 GN=Alkbh3 PE=1 SV=1 0 2 2 0.5648 0 1 1 1 715.38361 1429.75994 1429.75967 0.18 0.00013 0/0 0 0 4451982 HCD 30 MS2 36.21981 171.9 110 33.4989 7187 7187 7185 QEplus033719.raw F4 170.2 163.7 198.7 138.3 177.6 182.8 269 3.86 1 FALSE 1.14E-05 8.00E-11 2.015 -250 19209 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STDSIR [R].sTDSIR.[L] N-Term(TMT6plex) 1 Q6ZQ38 Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2 Q6ZQ38 Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2 0 2 2 0.1091 0 1 1 1 454.25671 907.50615 907.50463 1.68 0.00076 0/0 0 0 20765722 HCD 30 MS2 30.01585 534.5 52.028 33.5011 7188 7188 7185 QEplus033719.raw F4 677.4 404.6 608.3 445 595.1 476.9 49 2.2 1 FALSE 0.003422 0.06629 0.097 -250 19228 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAYSPR [R].qAYSPR.[R] N-Term(TMT6plex) 4 Q569Z6 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1 Q569Z6; Q8BZN7; Q8R353; Q8BV76 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Thrap3 protein OS=Mus musculus OX=10090 GN=Thrap3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Thrap3 PE=2 SV=1 0 2 2 0.4595 0 1 1 1 475.76718 950.52709 950.5257 1.46 0.0007 0/0 0 0 5675107.5 HCD 30 MS2 27.8177 410.1 110 33.5084 7191 7191 7185 QEplus033719.raw F4 403.1 417.5 481.2 332.2 434.5 392 130 1.85 1 FALSE 0.005628 0.09467 0.021 -250 19238 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSDVEQTAR [K].sSDVEQTAR.[G] N-Term(TMT6plex) 7 B2RXQ4 Nek1 protein OS=Mus musculus OX=10090 GN=Nek1 PE=1 SV=1 B2RXQ4; B7ZWK0; Q69Z74; Q811L2; P51954; Q3UXI0; B2RXX0 Nek1 protein OS=Mus musculus OX=10090 GN=Nek1 PE=1 SV=1; Nek1 protein OS=Mus musculus OX=10090 GN=Nek1 PE=1 SV=1; MKIAA1901 protein (Fragment) OS=Mus musculus OX=10090 GN=Nek1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nek1 PE=2 SV=1; Serine/threonine-protein kinase Nek1 OS=Mus musculus OX=10090 GN=Nek1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nek1 PE=2 SV=1; Nek1 protein OS=Mus musculus OX=10090 GN=Nek1 PE=1 SV=1 0 2 2 0.4387 0 1 1 1 611.31793 1221.62859 1221.62726 1.09 0.00066 0/0 0 0 3414232.25 HCD 30 MS2 12.77272 122 110 33.5159 7194 7194 7185 QEplus033719.raw F4 128.6 101.4 121.5 110.8 142.9 126.9 195 3.26 1 FALSE 1.14E-05 3.52E-06 1.134 -250 19246 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPGTNGEGEEEAR [R].qPGTNGEGEEEAR.[D] N-Term(TMT6plex) 2 B7ZP20 Ankyrin repeat and FYVE domain containing 1 OS=Mus musculus OX=10090 GN=Ankfy1 PE=2 SV=1 B7ZP20; Q810B6 Ankyrin repeat and FYVE domain containing 1 OS=Mus musculus OX=10090 GN=Ankfy1 PE=2 SV=1; Rabankyrin-5 OS=Mus musculus OX=10090 GN=Ankfy1 PE=1 SV=2 0 2 2 0.8371 0 1 1 1 801.88184 1602.7564 1602.75571 0.43 0.00034 0/0 0 0 2840927.5 HCD 30 MS2 11.78679 46 110 33.5185 7195 7195 7185 QEplus033719.raw F4 41.7 40.8 52.1 47.2 44.6 49.4 53 3.99 1 FALSE 1.14E-05 6.39E-08 1.464 -250 19253 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPARPQPER [R].tPARPQPER.[R] N-Term(TMT6plex) 1 Q80ZM5 "H1 histone family, member X OS=Mus musculus OX=10090 GN=H1f10 PE=1 SV=1" Q80ZM5 "H1 histone family, member X OS=Mus musculus OX=10090 GN=H1f10 PE=1 SV=1" 0 3 3 0.4691 0 1 1 1 427.58102 1280.72852 1280.72725 0.99 0.00042 0/0 0 0 6159716 HCD 30 MS2 28.61571 257.7 110 33.5258 7197 7197 7196 QEplus033719.raw F4 348.1 239.3 230.6 187.8 319.4 220.9 377 2.75 1 FALSE 5.44E-05 0.002111 0.593 -250 19265 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISQEGQR [R].iSQEGQR.[M] N-Term(TMT6plex) 2 Q8BMS1 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1" Q8BMS1; Q3TB39 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1; 3HCDH_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hadha PE=2 SV=1" 0 2 2 0.1471 0 1 1 1 523.79205 1046.57683 1046.57919 -2.25 -0.00118 0/0 0 0 69471696 HCD 30 MS2 2.977318 491.5 18.064 33.5306 7199 7199 7196 QEplus033719.raw F4 577.9 342 507.2 573.1 430.5 518.5 381 2.38 1 FALSE 0.0008445 0.0117 0.378 -250 19273 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TADGRPQEVGR [R].tADGRPQEVGR.[V] N-Term(TMT6plex) 3 Q80YP5 Integrin alpha 5 (Fibronectin receptor alpha) OS=Mus musculus OX=10090 GN=Itga5 PE=2 SV=1 Q3U7M6; Q80YP5; P11688 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Itga5 PE=2 SV=1; Integrin alpha 5 (Fibronectin receptor alpha) OS=Mus musculus OX=10090 GN=Itga5 PE=2 SV=1; Integrin alpha-5 OS=Mus musculus OX=10090 GN=Itga5 PE=1 SV=3 0 3 3 0.5562 0 1 1 1 472.2587 1414.76154 1414.76001 1.08 0.00051 0/0 0 0 29951594 HCD 30 MS2 30.97959 646.1 65.651 33.5328 7200 7200 7196 QEplus033719.raw F4 756.1 524.8 696 504.6 831.2 564.1 296 3.65 1 FALSE 1.14E-05 4.84E-05 0.917 -250 19299 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEERAEVAESR [R].sEERAEVAESR.[A] N-Term(TMT6plex) 4 A2AIM4; P58774-2 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 Q91VH3; A2AIM4; Q3SX28; P58774-2 Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 1 3 3 0.6075 0 1 1 1 497.92609 1491.76371 1491.76007 2.44 0.00121 0/0 0 0 10172589 HCD 30 MS2 30.00436 651.2 110 33.5422 7204 7204 7196 QEplus033719.raw F4 631.7 697.7 636.5 380.6 1101.8 458.6 199 4.28 2 TRUE 1.14E-05 1.57E-06 1.2 -250 19306 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGSEIEGGR [R].gGSEIEGGR.[M] N-Term(TMT6plex) 18 E9Q6L0 CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2 E9Q6L0; Q80TV8-2; A0A087WNW8; Q80TV8; A0A087WQ31; A0A087WRK0; E9QNY9; E9QKH0; A5D6Q8; A0A0A6YXZ1; A0A087WQ95; B2RY22; A0A087WS18; A0A087WP42; A0A087WRE8; J3QP81; A0A0A6YWK1; A0A087WQF1 CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; Isoform 2 of CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; Clasp1 protein OS=Mus musculus OX=10090 GN=Clasp1 PE=2 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; Clasp1 protein OS=Mus musculus OX=10090 GN=Clasp1 PE=2 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2 0 2 2 0.3646 0 1 1 1 545.78912 1090.57097 1090.56902 1.79 0.00098 0/0 0 0 7644187.5 HCD 30 MS2 11.97417 467.3 110 33.5447 7205 7205 7196 QEplus033719.raw F4 524.2 311.9 488.1 415.9 517 546.9 202 2.88 1 FALSE 1.14E-05 2.88E-06 1.15 -250 19311 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIQESR [K].dIQESR.[K] N-Term(TMT6plex) 3 Q8BI84 Transport and Golgi organization protein 1 homolog OS=Mus musculus OX=10090 GN=Mia3 PE=1 SV=2 Q8BI84; Q8BI84-2; A0A0R4J2D3 Transport and Golgi organization protein 1 homolog OS=Mus musculus OX=10090 GN=Mia3 PE=1 SV=2; Isoform 2 of Transport and Golgi organization protein 1 homolog OS=Mus musculus OX=10090 GN=Mia3; Transport and Golgi organization protein 1 homolog OS=Mus musculus OX=10090 GN=Mia3 PE=1 SV=3 0 2 2 0.257 0 1 1 1 488.76669 976.52611 976.52609 0.02 0.00001 0/0 0 0 6956455.5 HCD 30 MS2 33.33904 591.8 110 33.5472 7206 7206 7196 QEplus033719.raw F4 710.5 451.1 630.9 499.9 687.1 571.2 180 2.49 1 FALSE 0.002056 0.03741 0.184 -250 19317 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSEYTQAR [K].qSEYTQAR.[E] N-Term(TMT6plex) 1 Q7TQ48-1 Isoform 2 of Sarcalumenin OS=Mus musculus OX=10090 GN=Srl Q7TQ48-1 Isoform 2 of Sarcalumenin OS=Mus musculus OX=10090 GN=Srl 0 2 2 0.6429 0 1 1 1 606.31531 1211.62334 1211.62178 1.29 0.00078 0/0 0 0 16792444 HCD 30 MS2 9.707994 484.2 110 33.5545 7208 7208 7207 QEplus033719.raw F4 549.6 121.5 421.3 921.5 143 748.2 173 2.66 1 FALSE 1.14E-05 0.0004397 0.733 -250 19326 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRQALEGR [K].dRQALEGR.[I] N-Term(TMT6plex) 9 A3KG38 NF-kappa-B essential modulator (Fragment) OS=Mus musculus OX=10090 GN=Ikbkg PE=1 SV=1 A3KG38; A3KG40; Q3UG24; E9Q2Y3; Q8VC91; Q7TSS3; A3KG41; A3KG44; O88522 NF-kappa-B essential modulator (Fragment) OS=Mus musculus OX=10090 GN=Ikbkg PE=1 SV=1; NF-kappa-B essential modulator (Fragment) OS=Mus musculus OX=10090 GN=Ikbkg PE=1 SV=1; NEMO domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ikbkg PE=2 SV=1; NF-kappa-B essential modulator OS=Mus musculus OX=10090 GN=Ikbkg PE=1 SV=1; Ikbkg protein OS=Mus musculus OX=10090 GN=Ikbkg PE=1 SV=1; Inhibitor of kappaB kinase gamma OS=Mus musculus OX=10090 GN=Ikbkg PE=1 SV=1; NF-kappa-B essential modulator (Fragment) OS=Mus musculus OX=10090 GN=Ikbkg PE=1 SV=1; NF-kappa-B essential modulator (Fragment) OS=Mus musculus OX=10090 GN=Ikbkg PE=1 SV=1; NF-kappa-B essential modulator OS=Mus musculus OX=10090 GN=Ikbkg PE=1 SV=2 1 3 3 0.4498 0 1 1 1 391.88992 1173.65522 1173.65375 1.25 0.00049 0/0 0 0 5190458.5 HCD 30 MS2 41.1903 396 110 33.557 7209 7209 7207 QEplus033719.raw F4 561.5 279 431.4 327.9 359.9 416.1 298 3.29 1 FALSE 1.14E-05 0.0004959 0.723 -250 19333 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEQERQEQEER [R].mEQERQEQEER.[E] N-Term(TMT6plex) 5 A0A0R4J1E3 Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1 F7CPL2; Q9QXS6-3; Q9QXS6; A0A0R4J1E3; Q9QXS6-2 Drebrin (Fragment) OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1; Isoform E2 of Drebrin OS=Mus musculus OX=10090 GN=Dbn1; Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=4; Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1; Isoform A2 of Drebrin OS=Mus musculus OX=10090 GN=Dbn1 1 3 3 0.6167 0 1 1 1 574.27631 1720.81437 1720.81218 1.27 0.00073 0/0 0 0 37259856 HCD 30 MS2 3.1792 330.4 53.307 33.5593 7210 7210 7207 QEplus033719.raw F4 361.9 263.7 421 221.6 384.4 329.5 86 3.6 1 FALSE 1.14E-05 1.01E-05 1.046 -250 19338 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQQTIGAR [R].nQQTIGAR.[K] N-Term(TMT6plex) 3 A0A087WQS2 Basic leucine zipper and W2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1 A0A087WQS2; Q9CQC6; A0A087WPF9 Basic leucine zipper and W2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1; Basic leucine zipper and W2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1; Basic leucine zipper and W2 domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1 0 2 2 0.4624 0 1 1 1 558.82251 1116.63774 1116.63229 4.89 0.00273 0/0 0 0 24190450 HCD 30 MS2 38.31384 448.4 37.855 33.5615 7211 7211 7207 QEplus033719.raw F4 429.6 378.6 486.1 351.9 578 466.4 397 2.79 1 FALSE 1.14E-05 5.82E-05 0.902 -250 19352 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLDDSANRR [R].tLDDSANRR.[I] N-Term(TMT6plex) 3 P54822 Adenylosuccinate lyase OS=Mus musculus OX=10090 GN=Adsl PE=1 SV=2 E9Q3T7; P54822; E9Q242 Adenylosuccinase OS=Mus musculus OX=10090 GN=Adsl PE=1 SV=1; Adenylosuccinate lyase OS=Mus musculus OX=10090 GN=Adsl PE=1 SV=2; Adenylosuccinate lyase OS=Mus musculus OX=10090 GN=Adsl PE=1 SV=1 1 3 3 0.562 0 1 1 1 426.23151 1276.67997 1276.68069 -0.57 -0.00024 0/0 0 0 16920096 HCD 30 MS2 19.17972 498.4 66.114 33.5661 7213 7213 7207 QEplus033719.raw F4 534.5 397.9 506.5 467.2 528.4 555.9 255 3.47 1 FALSE 1.14E-05 4.39E-07 1.305 -250 19371 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TRFDDDDRR [R].tRFDDDDRR.[R] N-Term(TMT6plex) 5 P32067 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 P32067; Q3TG93; Q9CYB9; Q8BTU4; F6SXM5 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; HTH La-type RNA-binding domain-containing protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Lupus La protein homolog (Fragment) OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 2 4 4 0.5015 0 1 1 1 356.9328 1424.70937 1424.70797 0.98 0.00035 0/0 0 0 8712686 HCD 30 MS2 22.72965 366.5 110 33.5733 7216 7216 7207 QEplus033719.raw F4 443.9 330 389 234.2 440.1 362 133 3.35 1 FALSE 1.14E-05 0.0008321 0.678 -250 19385 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATSQPPNSSEAGR [R].aTSQPPNSSEAGR.[K] N-Term(TMT6plex) 6 Q6PB99 Ena/VASP-like protein OS=Mus musculus OX=10090 GN=Evl PE=2 SV=1 Q6PB99; A0A1Y7VJA2; E9PVP4; P70429-2; P70429; F8WJB9 Ena/VASP-like protein OS=Mus musculus OX=10090 GN=Evl PE=2 SV=1; Ena/VASP-like protein (Fragment) OS=Mus musculus OX=10090 GN=Evl PE=1 SV=1; Ena/VASP-like protein OS=Mus musculus OX=10090 GN=Evl PE=1 SV=1; Isoform 1 of Ena/VASP-like protein OS=Mus musculus OX=10090 GN=Evl; Ena/VASP-like protein OS=Mus musculus OX=10090 GN=Evl PE=1 SV=2; Ena/VASP-like protein OS=Mus musculus OX=10090 GN=Evl PE=1 SV=1 0 2 2 0.7234 0 1 1 1 765.89093 1530.77458 1530.77096 2.36 0.00181 0/0 0 0 2314818.75 HCD 30 MS2 0 51.2 110 33.5856 7220 7220 7218 QEplus033719.raw F4 49.1 45.5 58.1 41.4 58.6 54.7 178 3.76 1 FALSE 1.14E-05 3.29E-11 2.089 -250 19393 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNAEDTMR [R].sNAEDTMR.[S] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.6897 0 1 1 1 576.78027 1152.55327 1152.55165 1.4 0.00081 0/0 0 0 117858224 HCD 30 MS2 4.184437 533 13.996 33.5879 7221 7221 7218 QEplus033719.raw F4 603.2 431.4 526.1 479.2 610.9 547.3 77 2.9 2 FALSE 2.26E-05 0.0009734 0.665 -250 19401 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVSGPER [K].qVSGPER.[T] N-Term(TMT6plex) 1 Q52L78 Alpha(B)-crystallin OS=Mus musculus OX=10090 GN=Cryab PE=1 SV=1 Q52L78 Alpha(B)-crystallin OS=Mus musculus OX=10090 GN=Cryab PE=1 SV=1 0 2 2 0.3555 0 1 1 1 501.28268 1001.55809 1001.55772 0.37 0.00018 0/0 0 0 114268256 HCD 30 MS2 31.15794 585.3 9.905 33.5902 7222 7222 7218 QEplus033719.raw F4 820.6 239.1 605.9 741.1 358.8 746.1 130 2.11 1 FALSE 0.003058 0.0598 0.115 -250 19407 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSLRDESQR [R].dSLRDESQR.[K] N-Term(TMT6plex) 2 E9Q2S9 Coiled-coil domain-containing protein 43 OS=Mus musculus OX=10090 GN=Ccdc43 PE=1 SV=1 E9Q2S9; Q9CR29 Coiled-coil domain-containing protein 43 OS=Mus musculus OX=10090 GN=Ccdc43 PE=1 SV=1; Coiled-coil domain-containing protein 43 OS=Mus musculus OX=10090 GN=Ccdc43 PE=1 SV=1 1 3 3 0.5727 0 1 1 1 445.5672 1334.68705 1334.68617 0.65 0.00029 0/0 0 0 32012074 HCD 30 MS2 15.30216 373.9 43.36 33.5924 7223 7223 7218 QEplus033719.raw F4 442.7 276 402.2 353.2 304.3 464.7 196 3.37 1 FALSE 3.35E-05 0.001298 0.639 -250 19429 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TADGRPQEVGR [R].tADGRPQEVGR.[V] N-Term(TMT6plex) 3 Q80YP5 Integrin alpha 5 (Fibronectin receptor alpha) OS=Mus musculus OX=10090 GN=Itga5 PE=2 SV=1 Q3U7M6; Q80YP5; P11688 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Itga5 PE=2 SV=1; Integrin alpha 5 (Fibronectin receptor alpha) OS=Mus musculus OX=10090 GN=Itga5 PE=2 SV=1; Integrin alpha-5 OS=Mus musculus OX=10090 GN=Itga5 PE=1 SV=3 0 2 2 0.4601 0 1 1 1 707.88422 1414.76116 1414.76001 0.81 0.00058 0/0 0 0 5711275.5 HCD 30 MS2 0 71.7 110 33.6045 7228 7228 7218 QEplus033719.raw F4 74.2 58.8 82.1 44.5 103.1 67.8 287 2.13 1 FALSE 0.000262 0.005358 0.493 -250 19444 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQQEMEEDQR [R].qQQEMEEDQR.[W] N-Term(TMT6plex) 8 K7Q751 Non-specific protein-tyrosine kinase OS=Mus musculus OX=10090 GN=Ptk2 PE=2 SV=1 K7Q751; P34152-5; A0A5F8MPY3; P34152-9; P34152-2; P34152-6; P34152-4; P34152 Non-specific protein-tyrosine kinase OS=Mus musculus OX=10090 GN=Ptk2 PE=2 SV=1; Isoform 5 of Focal adhesion kinase 1 OS=Mus musculus OX=10090 GN=Ptk2; Non-specific protein-tyrosine kinase OS=Mus musculus OX=10090 GN=Ptk2 PE=1 SV=1; Isoform 9 of Focal adhesion kinase 1 OS=Mus musculus OX=10090 GN=Ptk2; Isoform 2 of Focal adhesion kinase 1 OS=Mus musculus OX=10090 GN=Ptk2; Isoform 6 of Focal adhesion kinase 1 OS=Mus musculus OX=10090 GN=Ptk2; Isoform 4 of Focal adhesion kinase 1 OS=Mus musculus OX=10090 GN=Ptk2; Focal adhesion kinase 1 OS=Mus musculus OX=10090 GN=Ptk2 PE=1 SV=4 0 2 2 0.7664 0 1 1 1 775.36041 1549.71355 1549.7114 1.39 0.00107 0/0 0 0 4671113.5 HCD 30 MS2 0 92.8 110 33.6143 7231 7231 7229 QEplus033719.raw F4 89.4 89 106.2 71.2 109.7 91.4 35 3.51 1 FALSE 1.14E-05 1.29E-07 1.406 -250 19451 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQHIQQPR [R].tQHIQQPR.[K] N-Term(TMT6plex) 3 Q91XC8 Death-associated protein 1 OS=Mus musculus OX=10090 GN=Dap PE=1 SV=3 A0A087WR57; A0A087WRC6; Q91XC8 Death-associated protein 1 OS=Mus musculus OX=10090 GN=Dap PE=1 SV=1; Death-associated protein 1 OS=Mus musculus OX=10090 GN=Dap PE=1 SV=1; Death-associated protein 1 OS=Mus musculus OX=10090 GN=Dap PE=1 SV=3 0 2 2 0.6014 0 1 1 1 618.85455 1236.70183 1236.70103 0.64 0.0004 0/0 0 0 44485408 HCD 30 MS2 11.24678 478 46.868 33.6188 7233 7233 7229 QEplus033719.raw F4 467.2 457.4 467.5 331.9 769.1 375.2 427 2.96 1 FALSE 0.001327 0.01826 0.297 -250 19457 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGSGNFGGGR [R].sGSGNFGGGR.[G] N-Term(TMT6plex) 8 Q3UK83 Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1 P70370; Q3TFB1; Q3UK83; P49312; Q3U7F3; P49312-2; Q3TIK8; Q5EBP8 HnRNP A1 (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=2; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Isoform Short of Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=1 0 2 2 0.5609 0 1 1 1 562.78662 1124.56597 1124.5646 1.21 0.00068 0/0 0 0 19994884 HCD 30 MS2 14.84404 642.3 92.077 33.6211 7234 7234 7229 QEplus033719.raw F4 656.2 473.2 553.8 413.5 1163.2 594.2 101 3.12 1 FALSE 1.14E-05 1.09E-07 1.421 -250 19466 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCDSLNNR [R].scDSLNNR.[C] N-Term(TMT6plex); C2(Carbamidomethyl) 5 Q28194 TREMBL:Q28194 (Bos taurus) Thrombospondin-1 Q28194; Q3TR40; P35441; Q8CGB2; Q80YQ1 TREMBL:Q28194 (Bos taurus) Thrombospondin-1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Thbs1 PE=2 SV=1; Thrombospondin-1 OS=Mus musculus OX=10090 GN=Thbs1 PE=1 SV=1; Thrombospondin 1 OS=Mus musculus OX=10090 GN=Thbs1 PE=2 SV=1; Thrombospondin-1 OS=Mus musculus OX=10090 GN=Thbs1 PE=1 SV=1 0 2 2 0.6398 0 1 1 1 597.79108 1194.57488 1194.57345 1.19 0.00071 0/0 0 0 14090536 HCD 30 MS2 0 393.1 110 33.6236 7235 7235 7229 QEplus033719.raw F4 373.4 293.5 296.8 257.8 806.4 330.8 50 2.61 1 TRUE 0.0001707 0.003929 0.529 -250 19473 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLDDSANRR [R].tLDDSANRR.[I] N-Term(TMT6plex) 3 P54822 Adenylosuccinate lyase OS=Mus musculus OX=10090 GN=Adsl PE=1 SV=2 E9Q3T7; P54822; E9Q242 Adenylosuccinase OS=Mus musculus OX=10090 GN=Adsl PE=1 SV=1; Adenylosuccinate lyase OS=Mus musculus OX=10090 GN=Adsl PE=1 SV=2; Adenylosuccinate lyase OS=Mus musculus OX=10090 GN=Adsl PE=1 SV=1 1 2 2 0.4221 0 1 1 1 638.8446 1276.68193 1276.68069 0.97 0.00062 0/0 0 0 8906112 HCD 30 MS2 4.326072 226.6 110 33.6261 7236 7236 7229 QEplus033719.raw F4 235.5 177 227.1 225.5 224.5 270.2 265 3.08 1 FALSE 1.14E-05 0.0001084 0.85 -250 19489 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDPGEAGPQGDQGR [R].gDPGEAGPQGDQGR.[E] N-Term(TMT6plex) 1 Q04857 Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 Q04857 Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 0 2 2 0.8168 0 1 1 1 785.3772 1569.74712 1569.74548 1.04 0.00082 0/0 0 0 6989348 HCD 30 MS2 0 179.1 110 33.6312 7238 7238 7229 QEplus033719.raw F4 155.4 202.1 187.1 119.4 242.4 168.3 66 4.04 1 FALSE 1.14E-05 1.36E-15 2.921 -250 19497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEEESQSQGR [R].mEEESQSQGR.[D] N-Term(TMT6plex) 2 Q9CU62 Structural maintenance of chromosomes protein 1A OS=Mus musculus OX=10090 GN=Smc1a PE=1 SV=4 A0JLM6; Q9CU62 Structural maintenance of chromosomes protein 1A (Fragment) OS=Mus musculus OX=10090 GN=Smc1a PE=2 SV=1; Structural maintenance of chromosomes protein 1A OS=Mus musculus OX=10090 GN=Smc1a PE=1 SV=4 0 2 2 0.8354 0 1 1 1 705.33032 1409.65337 1409.65282 0.39 0.00027 0/0 0 0 6201279.5 HCD 30 MS2 5.482416 190.3 110 33.6337 7239 7239 7229 QEplus033719.raw F4 186.8 206.2 201.3 117.5 267.6 162.3 37 3.22 1 FALSE 1.14E-05 1.50E-06 1.204 -250 19501 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HPQGEQMYRR [R].hPQGEQMYRR.[V] N-Term(TMT6plex) 31 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q499F9; Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q05CR3; Q9QXS1-9; E9Q9J6; Q9QXS1-5; E9PW24; A0A0R4J221; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; A0A0R4J223; Q8C8S5; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 4 4 0.2325 0 1 1 1 383.45035 1530.77956 1530.7797 -0.09 -0.00003 0/0 0 0 2962778.75 HCD 30 MS2 64.63953 383.5 106.903 33.6434 7242 7242 7240 QEplus033719.raw F4 564.5 267.2 423.8 367.1 317.4 360.8 199 2.28 2 FALSE 0.001658 0.02737 0.23 -250 19509 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGADEERAETAR [K].aGADEERAETAR.[L] N-Term(TMT6plex) 4 Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 A0A1W2P7B7; Q9JJD8; Q542X7; A0A1W2P6Q3 T-complex protein 1 subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1; CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=2 SV=1; CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1; T-complex protein 1 subunit beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 1 3 3 0.671 0 1 1 1 502.2569 1504.75614 1504.75531 0.55 0.00027 0/0 0 0 95655264 HCD 30 MS2 25.27845 454.6 12.417 33.6456 7243 7243 7240 QEplus033719.raw F4 518.1 335.6 521.3 392.2 478.7 482 161 4.62 1 FALSE 1.14E-05 1.90E-07 1.374 -250 19532 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDNLTR [K].sDNLTR.[A] N-Term(TMT6plex) 1 Q9JHW2 Omega-amidase NIT2 OS=Mus musculus OX=10090 GN=Nit2 PE=1 SV=1 Q9JHW2 Omega-amidase NIT2 OS=Mus musculus OX=10090 GN=Nit2 PE=1 SV=1 0 2 2 0.3486 0 1 1 1 467.76251 934.51775 934.51553 2.38 0.00111 0/0 0 0 11387797 HCD 30 MS2 14.54851 622 110 33.6571 7248 7248 7240 QEplus033719.raw F4 817.1 452.6 681.3 606.3 600.7 574.2 144 2.18 1 FALSE 0.00198 0.03447 0.196 -250 19556 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESTNSMETR [K].eSTNSMETR.[F] N-Term(TMT6plex) 3 P61759 Prefoldin subunit 3 OS=Mus musculus OX=10090 GN=Vbp1 PE=1 SV=2 P61759; A3KMJ8; Q3TIR6 Prefoldin subunit 3 OS=Mus musculus OX=10090 GN=Vbp1 PE=1 SV=2; Vbp1 protein (Fragment) OS=Mus musculus OX=10090 GN=Vbp1 PE=2 SV=1; Prefoldin subunit 3 OS=Mus musculus OX=10090 GN=Vbp1 PE=1 SV=1 0 2 2 0.6657 0 1 1 1 642.30902 1283.61077 1283.6099 0.68 0.00043 0/0 0 0 19207012 HCD 30 MS2 23.58996 466.5 80.981 33.6695 7252 7252 7251 QEplus033719.raw F4 559.6 351.2 453.2 417.1 505.4 512.3 54 3.35 1 FALSE 1.14E-05 6.03E-05 0.899 -250 19564 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGADEERAETAR [K].aGADEERAETAR.[L] N-Term(TMT6plex) 4 Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 A0A1W2P7B7; Q9JJD8; Q542X7; A0A1W2P6Q3 T-complex protein 1 subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1; CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=2 SV=1; CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1; T-complex protein 1 subunit beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 1 2 2 0.6201 0 1 1 1 752.88245 1504.75762 1504.75531 1.53 0.00115 0/0 0 0 11385214 HCD 30 MS2 2.144962 108.7 110 33.672 7253 7253 7251 QEplus033719.raw F4 114.4 98.7 124.5 80.2 135.7 98.9 153 3.08 1 FALSE 1.14E-05 2.32E-09 1.738 -250 19571 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHPGLAGAR [R].gHPGLAGAR.[G] N-Term(TMT6plex) 4 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 3 3 0.4329 0 1 1 1 355.54395 1064.61728 1064.61624 0.98 0.00035 0/0 0 0 91968680 HCD 30 MS2 10.06118 200.6 13.511 33.6743 7254 7254 7251 QEplus033719.raw F4 189.8 199.1 243.4 89.6 282.9 198.6 90 2.98 1 FALSE 1.14E-05 7.84E-07 1.257 -250 19580 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGNFGGSR [K].sGNFGGSR.[N] N-Term(TMT6plex) 5 O88569 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2 O88569-3; B7ZP22; O88569; A0A0N4SUM2; O88569-2 Isoform 3 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2; Heterogeneous nuclear ribonucleoproteins A2/B1 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 0 2 2 0.5694 0 1 1 1 505.76477 1010.52226 1010.52167 0.58 0.0003 0/0 0 0 85734128 HCD 30 MS2 4.430475 743.8 15.485 33.6765 7255 7255 7251 QEplus033719.raw F4 854.3 621.9 770.3 599.5 984.5 632.3 103 2.88 1 FALSE 1.14E-05 0.0007348 0.689 -250 19589 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGISETR [K].gGISETR.[I] N-Term(TMT6plex) 51 F7BUB8; O70318; Q9WV92-2 Protein 4.1 (Fragment) OS=Mus musculus OX=10090 GN=Epb41 PE=1 SV=1;Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2;Isoform 2 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 Q811B2; Q9WV92; F7BUB8; A7MCX4; A2A842; Q7TPN6; A2A841; Q9WV92-7; B6ZHC3; B6ZHC6; Q3U0G7; B6ZHC8; P48193-2; O70318; A0A3B2WD96; A0A1W2P7I2; Q9WV92-4; Q3V048; Q9WV92-5; Q80UE5; F6S4K9; A0A068WAQ5; Q8BSR4; A0A1W2P6H2; Q80UE3; D0VYV7; Q80UE4; Q9WV92-3; B6ZHC5; B6ZHD1; D0VYV6; B6ZHC7; Q9WV92-2; V6BQR3; F7CR30; Q9WV92-8; A0A286YD84; Q8BT38; A7YY80; A0A286YDY4; A2A839; A0A5F8MPR1; P48193; A0A068WAZ7; Q3UNQ6; B6ZHC2; Q9WV92-6; A0A5F8MPE1; A0A571BEG4; A0A3B2WBE1; A2A838 Epb4.1l2 protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Protein 4.1 (Fragment) OS=Mus musculus OX=10090 GN=Epb41 PE=1 SV=1; Epb4.1l3 protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Band 4.1 OS=Mus musculus OX=10090 GN=Epb41 PE=1 SV=1; Epb4.1l2 protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1 OS=Mus musculus OX=10090 GN=Epb41 PE=1 SV=1; Isoform 7 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Protein 4.1R (Fragment) OS=Mus musculus OX=10090 GN=Epb41 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; 4_1_CTD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41 PE=2 SV=1; Band 4.1 OS=Mus musculus OX=10090 GN=Epb41 PE=2 SV=1; Isoform 2 of Protein 4.1 OS=Mus musculus OX=10090 GN=Epb41; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Isoform 4 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Epb41 PE=2 SV=1; Isoform 5 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Protein 4.1 (Fragment) OS=Mus musculus OX=10090 GN=Epb41 PE=1 SV=1; Band 4.1 (Fragment) OS=Mus musculus OX=10090 GN=Epb41 PE=2 SV=1; 4_1_CTD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Protein 4.1G OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 3 isoform C OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Isoform 3 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Isoform 2 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; 60kDa 4.1B MEF cell isoform (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Protein 4.1 (Fragment) OS=Mus musculus OX=10090 GN=Epb41 PE=1 SV=1; Isoform 8 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Band 4.1-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; 4_1_CTD domain-containing protein OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; 130kDa Protein 4.1B MEF cell isoform OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Band 4.1-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Band 4.1 OS=Mus musculus OX=10090 GN=Epb41 PE=1 SV=1; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Protein 4.1 OS=Mus musculus OX=10090 GN=Epb41 PE=1 SV=2; Band 4.1 (Fragment) OS=Mus musculus OX=10090 GN=Epb41 PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Protein 4.1R (Fragment) OS=Mus musculus OX=10090 GN=Epb41 PE=2 SV=1; Isoform 6 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Band 4.1 OS=Mus musculus OX=10090 GN=Epb41 PE=1 SV=1; Band 4.1-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Band 4.1 (Fragment) OS=Mus musculus OX=10090 GN=Epb41 PE=1 SV=1 0 2 2 0.2488 0 1 1 1 474.76984 948.5324 948.53118 1.29 0.00061 0/0 0 0 84696696 HCD 30 MS2 4.766548 601.4 17.533 33.6788 7256 7256 7251 QEplus033719.raw F4 615.1 603.1 663.9 423 814.8 488.7 158 2.13 3 FALSE 0.0008718 0.01188 0.375 -250 19594 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVAGEDGR [R].aAVAGEDGR.[M] N-Term(TMT6plex) 8 Q9Z204-2; Q9Z204-3 Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc;Isoform 3 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc Q3U6P5; Q9Z204; Q9Z204-5; Q9Z204-2; A0A2I3BQH3; Q9Z204-4; Q9Z204-3; A0A2I3BRM6 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Hnrnpc PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc PE=1 SV=1; Isoform 5 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Heterogeneous nuclear ribonucleoproteins C1/C2 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpc PE=1 SV=1; Isoform 4 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform 3 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Heterogeneous nuclear ribonucleoproteins C1/C2 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpc PE=1 SV=1 0 2 2 0.5853 0 1 1 1 537.79077 1074.57427 1074.5741 0.15 0.00008 0/0 0 0 15184160 HCD 30 MS2 5.805169 781.4 101.619 33.6811 7257 7257 7251 QEplus033719.raw F4 783.6 793 842.3 539.3 1047.4 683.1 152 3.4 2 FALSE 1.14E-05 1.05E-05 1.043 -250 19604 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHPGLAGAR [R].gHPGLAGAR.[G] N-Term(TMT6plex) 4 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.4194 0 1 1 1 532.81219 1064.61711 1064.61624 0.82 0.00044 0/0 0 0 13983178 HCD 30 MS2 6.302384 657.5 110 33.6859 7259 7259 7251 QEplus033719.raw F4 617.1 654.3 748.4 309.1 962.9 652.9 90 2.79 1 FALSE 1.14E-05 7.93E-06 1.067 -250 19618 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARIEAENR [K].aRIEAENR.[A] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.2263 0 1 1 1 594.34119 1187.6751 1187.6694 4.8 0.00285 0/0 0 0 11345759 HCD 30 MS2 43.65521 380.8 110 33.6909 7261 7261 7251 QEplus033719.raw F4 341.2 336.4 413.4 314.3 453.1 426.4 357 2.43 2 FALSE 0.002123 0.03965 0.176 -250 19661 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQMAAAR [R].dQMAAAR.[G] N-Term(TMT6plex) 4 Q545R0 "Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1" A0A494BAD0; Q6NV50; Q3TGQ3; Q545R0 "Catenin alpha-1 (Fragment) OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1; Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctnna1 PE=2 SV=1; Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1" 0 2 2 0.4591 0 1 1 1 496.26349 991.5197 991.51923 0.47 0.00024 0/0 0 0 26549812 HCD 30 MS2 22.91808 722.3 55.567 33.7097 7268 7268 7262 QEplus033719.raw F4 803.2 502.5 793.3 609.3 875.6 749.7 174 2.57 1 FALSE 0.0002518 0.0052 0.496 -250 19671 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDPGEAGPQGDQGR [R].gDPGEAGPQGDQGR.[E] N-Term(TMT6plex) 1 Q04857 Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 Q04857 Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 0 3 3 0.8202 0 1 1 1 523.92047 1569.74686 1569.74548 0.88 0.00046 0/0 0 0 19101338 HCD 30 MS2 28.01303 500.1 93.088 33.712 7269 7269 7262 QEplus033719.raw F4 565.2 351.7 475.3 538.7 588.8 480.8 68 4.95 1 FALSE 1.14E-05 1.76E-09 1.76 -250 19681 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADHGEPIGR [R].aDHGEPIGR.[G] N-Term(TMT6plex) 1 Q71LX8 Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q71LX8 Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 0 3 3 0.64 0 1 1 1 394.21423 1180.62815 1180.6272 0.8 0.00032 0/0 0 0 14923274 HCD 30 MS2 33.07134 257.9 58.379 33.7142 7270 7270 7262 QEplus033719.raw F4 294.3 209.5 256 208.6 305.5 273.2 228 3.75 1 FALSE 1.14E-05 2.79E-07 1.343 -250 19687 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGADGVMR [K].rGADGVMR.[T] N-Term(TMT6plex) 8 Q570Z8 MKIAA4114 protein (Fragment) OS=Mus musculus OX=10090 GN=Picalm PE=2 SV=1 Q570Z8; Q7M6Y3; Q7M6Y3-5; Q7M6Y3-6; Q7M6Y3-4; A0A140LHQ8; Q7M6Y3-2; Q7M6Y3-3 MKIAA4114 protein (Fragment) OS=Mus musculus OX=10090 GN=Picalm PE=2 SV=1; Phosphatidylinositol-binding clathrin assembly protein OS=Mus musculus OX=10090 GN=Picalm PE=1 SV=1; Isoform 5 of Phosphatidylinositol-binding clathrin assembly protein OS=Mus musculus OX=10090 GN=Picalm; Isoform 6 of Phosphatidylinositol-binding clathrin assembly protein OS=Mus musculus OX=10090 GN=Picalm; Isoform 4 of Phosphatidylinositol-binding clathrin assembly protein OS=Mus musculus OX=10090 GN=Picalm; Phosphatidylinositol-binding clathrin assembly protein (Fragment) OS=Mus musculus OX=10090 GN=Picalm PE=1 SV=1; Isoform 2 of Phosphatidylinositol-binding clathrin assembly protein OS=Mus musculus OX=10090 GN=Picalm; Isoform 3 of Phosphatidylinositol-binding clathrin assembly protein OS=Mus musculus OX=10090 GN=Picalm 1 3 3 0.4006 0 1 1 1 364.20392 1090.5972 1090.59888 -1.54 -0.00056 0/0 0 0 9927890 HCD 30 MS2 27.95183 373.7 110 33.7167 7271 7271 7262 QEplus033719.raw F4 553.7 237.8 365.5 316.3 377.4 391.4 295 3.57 1 FALSE 1.14E-05 0.000121 0.841 -250 19696 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLAGEDR [R].qLAGEDR.[K] N-Term(TMT6plex) 4 Q0VGN2 Myt1l protein OS=Mus musculus OX=10090 GN=Myt1l PE=2 SV=1 P97500-4; P97500-2; Q0VGN2; P97500 Isoform 4 of Myelin transcription factor 1-like protein OS=Mus musculus OX=10090 GN=Myt1l; Isoform 2 of Myelin transcription factor 1-like protein OS=Mus musculus OX=10090 GN=Myt1l; Myt1l protein OS=Mus musculus OX=10090 GN=Myt1l PE=2 SV=1; Myelin transcription factor 1-like protein OS=Mus musculus OX=10090 GN=Myt1l PE=1 SV=3 0 2 2 0 2 2 2 509.2796 1017.55193 1017.55264 -0.7 -0.00036 0/0 0 0 9787634 HCD 30 MS2 26.38481 646.4 110 33.7192 7272 7272 7262 QEplus033719.raw F4 782.3 462.9 655.2 573.5 793.3 610.9 174 2.46 1 FALSE 0.005139 0.0883 0.039 -250 19703 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESDSEHVPR [R].eSDSEHVPR.[D] N-Term(TMT6plex) 35 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q61595-2; A0A087WPY8; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WR91; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin (Fragment) OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 3 3 0.6014 0 1 1 1 428.88492 1284.6402 1284.63816 1.59 0.00068 0/0 0 0 3783991.5 HCD 30 MS2 63.2703 389.5 110 33.729 7275 7275 7273 QEplus033719.raw F4 687.5 271 342.9 328.5 380.1 326.8 116 4.24 1 FALSE 1.14E-05 4.24E-06 1.118 -250 19711 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REALEQR [R].rEALEQR.[L] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 1 3 3 0.145 0 1 1 1 377.55426 1130.64823 1130.64794 0.26 0.0001 0/0 0 0 46767132 HCD 30 MS2 40.59595 328.8 18.815 33.7312 7276 7276 7273 QEplus033719.raw F4 392.8 237.6 352.3 263.3 397.6 329 328 3.31 1 FALSE 0.0008805 0.01223 0.37 -250 19717 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVSEPR [K].gVSEPR.[E] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.3023 0 1 1 1 437.25333 873.49938 873.49915 0.26 0.00011 0/0 0 0 20938680 HCD 30 MS2 53.19225 520 55.663 33.7335 7277 7277 7273 QEplus033719.raw F4 694.6 173.4 418.1 986.7 230.7 616.3 102 1.72 2 FALSE 0.004228 0.07813 0.066 -250 19726 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REALEQR [R].rEALEQR.[L] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 1 2 2 0.0609 0 1 1 1 565.82764 1130.648 1130.64794 0.05 0.00003 0/0 0 0 9556282 HCD 30 MS2 19.68797 248.9 110 33.7382 7279 7279 7273 QEplus033719.raw F4 298.6 169.9 248.8 249 244.7 282.1 394 2.3 1 FALSE 0.001438 0.02082 0.274 -250 19732 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRPGPPGTAGAR [R].gRPGPPGTAGAR.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 3 3 0.5691 0 1 1 1 441.58789 1322.74912 1322.74905 0.05 0.00002 0/0 0 0 8837691 HCD 30 MS2 30.54033 322.1 110 33.7407 7280 7280 7273 QEplus033719.raw F4 327.7 309.4 373.5 195.7 386.5 339.8 440 3.62 1 FALSE 1.14E-05 3.34E-06 1.138 -250 19741 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADHGEPIGR [R].aDHGEPIGR.[G] N-Term(TMT6plex) 1 Q71LX8 Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q71LX8 Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 0 2 2 0.6486 0 1 1 1 590.81769 1180.6281 1180.6272 0.76 0.00045 0/0 0 0 6771051 HCD 30 MS2 9.654364 446 110 33.7457 7282 7282 7273 QEplus033719.raw F4 472.8 347.4 481.6 363.2 517.6 493.3 228 2.76 1 FALSE 1.14E-05 3.23E-06 1.141 -250 19761 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGGAAASVPR [R].aGGAAASVPR.[A] N-Term(TMT6plex) 1 A2AM80 "Family with sequence similarity 43, member B OS=Mus musculus OX=10090 GN=Fam43b PE=4 SV=1" A2AM80 "Family with sequence similarity 43, member B OS=Mus musculus OX=10090 GN=Fam43b PE=4 SV=1" 0 2 2 0.25 0 1 1 1 543.31622 1085.62517 1085.62647 -1.2 -0.00065 0/0 0 0 4050391 HCD 30 MS2 48.75348 278.8 110 33.7578 7286 7286 7284 QEplus033719.raw F4 580.4 124.7 171.6 292.2 321.8 182 193 1.92 1 FALSE 0.004972 0.08665 0.043 -250 19814 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGRDREEPASK [R].dGRDREEPASk.[H] N-Term(TMT6plex); K11(TMT6plex) 5 P32067 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 P32067; Q3TG93; Q9CYB9; Q8BTU4; F6SXM5 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; HTH La-type RNA-binding domain-containing protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Lupus La protein homolog (Fragment) OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 2 3 3 0.4708 0 1 1 1 573.31219 1717.92203 1717.92333 -0.76 -0.00043 0/0 0 0 3871572.75 HCD 30 MS2 27.9507 191.5 110 33.7749 7293 7293 7284 QEplus033719.raw F4 247.1 153.8 211.8 133.8 242 160.2 375 2.57 1 FALSE 5.44E-05 0.001994 0.599 -250 19826 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDLESR [K].sDLESR.[R] N-Term(TMT6plex) 8 P53994 Ras-related protein Rab-2A OS=Mus musculus OX=10090 GN=Rab2a PE=1 SV=1 Q6PDZ3; Q8BXY4; P53994; Q6P7T7; P59279; Q5U628; Q9DB48; Q3TEG7 "RAB2A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab2a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab2a PE=2 SV=1; Ras-related protein Rab-2A OS=Mus musculus OX=10090 GN=Rab2a PE=1 SV=1; Rab2b protein OS=Mus musculus OX=10090 GN=Rab2b PE=2 SV=1; Ras-related protein Rab-2B OS=Mus musculus OX=10090 GN=Rab2b PE=1 SV=1; RAB2B, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab2b PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab2b PE=2 SV=1; Ras-related protein Rab-2B OS=Mus musculus OX=10090 GN=Rab2b PE=1 SV=1" 0 2 2 0.1723 0 1 1 1 468.25381 935.50035 935.49954 0.87 0.00041 0/0 0 0 19208910 HCD 30 MS2 26.95523 542.6 55.432 33.7847 7296 7296 7295 QEplus033719.raw F4 657.9 441.4 633.6 494.9 552.3 475.3 97 2.38 1 FALSE 0.002334 0.04658 0.152 -250 19836 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRDYSGSQGGYDR [R].sRDYSGSQGGYDR.[Y] N-Term(TMT6plex) 1 O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 1 3 3 0.7104 0 1 1 1 559.59918 1676.78299 1676.78259 0.24 0.00013 0/0 0 0 16453599 HCD 30 MS2 21.65147 294.2 88.751 33.7894 7298 7298 7295 QEplus033719.raw F4 294.2 305 330.2 181.1 412.3 242.1 62 5.11 1 FALSE 1.14E-05 5.47E-12 2.237 -250 19841 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEEEER [R].mEEEER.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.1829 0 1 1 1 526.25067 1051.49407 1051.49274 1.26 0.00066 0/0 0 0 9944758 HCD 30 MS2 19.45004 558.3 110 33.7919 7299 7299 7295 QEplus033719.raw F4 751.2 403 550.7 515.6 596.2 533.3 73 2.46 2 FALSE 0.0023 0.04512 0.157 -250 19859 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDQALTEEHAR [R].rDQALTEEHAR.[Q] N-Term(TMT6plex) 3 A1BN54; Q7TPR4 Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1;Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 Q99LJ3; A1BN54; Q7TPR4 Actn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Actn1 PE=2 SV=1; Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1; Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 1 3 3 0.6591 0 1 1 1 518.94464 1554.81937 1554.81858 0.51 0.00026 0/0 0 0 7143193 HCD 30 MS2 5.653156 172.7 110 33.7969 7301 7301 7295 QEplus033719.raw F4 177.9 149.3 191 128.9 227.4 161.6 256 5.72 2 FALSE 1.14E-05 6.10E-14 2.607 -250 19885 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGHVTER [K].vGHVTER.[T] N-Term(TMT6plex) 6 Q3UXT6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1 E9Q8F0; Q3UXT6; Q8VH51; Q0VGU9; F7AA45; Q8VH51-2 RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1; RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2; Rbm39 protein OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1; RNA-binding protein 39 (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=1; Isoform 2 of RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 0 2 2 0.4238 0 1 1 1 513.79852 1026.58977 1026.58936 0.4 0.00021 0/0 0 0 2594633.25 HCD 30 MS2 14.43693 261.2 110 33.8069 7305 7305 7295 QEplus033719.raw F4 346.4 203.2 271.9 261.1 299.6 185.1 89 2.69 1 FALSE 0.001736 0.02932 0.22 -250 19895 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQPPSSAASR [R].aQPPSSAASR.[V] N-Term(TMT6plex) 18 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 D6RCH1; D3YWY7; Q3UZD9; Q8BUW8; Q6NZJ6-2; A0PJB5; E9Q9E1; D3YWM1; Q3UQI5; Q3UYM6; E9Q770; D3YWC6; E9PVC5; E9PVC6; A0A338P758; D3Z439; Q6NZJ6; Q3UTK0 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 0 2 2 0.5089 0 1 1 1 600.83081 1200.65434 1200.65342 0.77 0.00046 0/0 0 0 15075178 HCD 30 MS2 7.019659 410.9 110 33.8142 7307 7307 7306 QEplus033719.raw F4 410 295.5 453.1 350.5 449.7 506.7 204 3.36 1 FALSE 1.14E-05 7.78E-06 1.068 -250 19904 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLQEETSQR [K].rLQEETSQR.[Q] N-Term(TMT6plex) 5 Q8K1N2 Pleckstrin homology-like domain family B member 2 OS=Mus musculus OX=10090 GN=Phldb2 PE=1 SV=2 F6QU68; Q8K1N2; Q8BZE3; Q8K1N2-2; D3Z069 Pleckstrin homology-like domain family B member 2 (Fragment) OS=Mus musculus OX=10090 GN=Phldb2 PE=1 SV=1; Pleckstrin homology-like domain family B member 2 OS=Mus musculus OX=10090 GN=Phldb2 PE=1 SV=2; PH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Phldb2 PE=2 SV=1; Isoform 2 of Pleckstrin homology-like domain family B member 2 OS=Mus musculus OX=10090 GN=Phldb2; Pleckstrin homology-like domain family B member 2 (Fragment) OS=Mus musculus OX=10090 GN=Phldb2 PE=1 SV=1 1 2 2 0.6054 0 1 1 1 688.37872 1375.75017 1375.74911 0.77 0.00053 0/0 0 0 2805639 HCD 30 MS2 20.60991 43.7 110 33.8167 7308 7308 7306 QEplus033719.raw F4 46.6 44.3 51.4 23.6 56.5 40 353 2.99 1 FALSE 1.14E-05 2.96E-05 0.958 -250 19921 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVPNCGR [K].nVPNcGR.[G] N-Term(TMT6plex); C5(Carbamidomethyl) 4 ENSEMBL:ENSBTAP00000016046 (Bos taurus) similar to fibulin-1 C isoform 1 B2CQD6; Q3TWK8; ENSEMBL:ENSBTAP00000016046; Q08879-2 Fibulin-1 OS=Mus musculus OX=10090 GN=Fbln1 PE=2 SV=1; Fibulin-1 OS=Mus musculus OX=10090 GN=Fbln1 PE=2 SV=1; (Bos taurus) similar to fibulin-1 C isoform 1; Isoform C of Fibulin-1 OS=Mus musculus OX=10090 GN=Fbln1 0 2 2 0.7175 0 1 1 1 523.27478 1045.54228 1045.54103 1.2 0.00063 0/0 0 0 35141916 HCD 30 MS2 5.966638 502.3 38.246 33.8213 7310 7310 7306 QEplus033719.raw F4 490.2 441.1 426.8 275.9 1096.7 283.2 126 2.23 1 TRUE 0.0008445 0.01173 0.377 -250 19924 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDTSGHFER [R].sDTSGHFER.[L] N-Term(TMT6plex) 7 Q922A2 Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1 Q922A2; Q3UYL7; Q07076; Q3TJ49; A0A2C9F2D2; Q8BP75; Q8CCV9 Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1; Annexin A7 OS=Mus musculus OX=10090 GN=Anxa7 PE=1 SV=2; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1 0 3 3 0.6452 0 1 1 1 422.20898 1264.6124 1264.61194 0.36 0.00015 0/0 0 0 24333030 HCD 30 MS2 25.2341 234.5 44.969 33.8235 7311 7311 7306 QEplus033719.raw F4 272.6 203.5 213.9 298.2 270 149 76 4.2 1 FALSE 1.14E-05 4.65E-08 1.49 -250 19929 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVIQEGR [K].rVIQEGR.[G] N-Term(TMT6plex) 2 O08915 AH receptor-interacting protein OS=Mus musculus OX=10090 GN=Aip PE=1 SV=1 D3YW40; O08915 AH receptor-interacting protein (Fragment) OS=Mus musculus OX=10090 GN=Aip PE=1 SV=1; AH receptor-interacting protein OS=Mus musculus OX=10090 GN=Aip PE=1 SV=1 1 3 3 0.476 0 1 1 1 362.89087 1086.65805 1086.65811 -0.05 -0.00002 0/0 0 0 24051664 HCD 30 MS2 30.5125 204.9 39.635 33.8258 7312 7312 7306 QEplus033719.raw F4 241.5 157.6 211.8 166.1 235.1 217 194 3.13 1 FALSE 0.002973 0.0578 0.12 -250 19938 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVVSQR [K].aVVSQR.[L] N-Term(TMT6plex) 6 Q3UBU0 HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1 Q3TUD6; Q3UBU0; Q91V38; Q8CCY5; F7C312; P08113 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Heat shock protein 90, beta (Grp94), member 1 OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Endoplasmin (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=1; Endoplasmin OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=2" 0 2 2 0.2521 0 1 1 1 444.7778 888.54833 888.54643 2.13 0.00095 0/0 0 0 15567206 HCD 30 MS2 53.88183 606.5 46.277 33.828 7313 7313 7306 QEplus033719.raw F4 727.7 537 667.1 506 670.6 530.4 68 2.34 1 FALSE 0.002056 0.03705 0.185 -250 19948 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HHAISAK [K].hHAISAk.[L] N-Term(TMT6plex); K7(TMT6plex) 2 Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 Q3TXE5; Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 0 3 3 0.6735 0 1 1 1 407.92026 1221.74622 1221.74681 -0.48 -0.0002 0/0 0 0 12829831 HCD 30 MS2 27.01617 408.8 77.15 33.8303 7314 7314 7306 QEplus033719.raw F4 830.8 225.6 348.7 327.7 397.2 322.5 274 2.91 1 FALSE 0.0006035 0.008927 0.422 -250 19962 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEQEAERR [R].mEQEAERR.[R] N-Term(TMT6plex) 3 B2RY56 RNA-binding protein 25 OS=Mus musculus OX=10090 GN=Rbm25 PE=1 SV=2 B2RY56; Q8BU35; S4R2B0 RNA-binding protein 25 OS=Mus musculus OX=10090 GN=Rbm25 PE=1 SV=2; PWI domain-containing protein OS=Mus musculus OX=10090 GN=Rbm25 PE=2 SV=1; RNA-binding protein 25 (Fragment) OS=Mus musculus OX=10090 GN=Rbm25 PE=1 SV=1 1 3 3 0.4074 0 1 1 1 426.55405 1277.64759 1277.64695 0.5 0.00021 0/0 0 0 8902356 HCD 30 MS2 55.12365 477.8 95.178 33.835 7316 7316 7306 QEplus033719.raw F4 533.7 375.8 504 413.6 533.1 506.7 188 3.51 1 FALSE 4.43E-05 0.001491 0.626 -250 19969 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEMASASSSQR [K].qEMASASSSQR.[G] N-Term(TMT6plex) 7 Q3UK83 Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1 B7ZWG9; Q3TFB1; Q3UK83; P49312; Q3U7F3; P49312-2; Q5EBP8 Hnrnpa1l2 protein OS=Mus musculus OX=10090 GN=Hnrnpa1l2 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=2; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Isoform Short of Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=1 0 2 2 0.5526 0 1 1 1 705.84692 1410.68657 1410.68446 1.5 0.00106 0/0 0 0 5081762 HCD 30 MS2 8.016387 144.6 110 33.8423 7318 7318 7317 QEplus033719.raw F4 142.7 124.9 145.7 83.9 223.1 147.1 95 3.42 1 FALSE 1.14E-05 3.78E-09 1.697 -250 19987 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAGVPSR [R].sAGVPSR.[V-] N-Term(TMT6plex) 16 Q8K144 Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1 E9QMW9; Q3TQW3; E9PZ39; P17225; Q8K144; Q8R509; Q3UBR5; E9Q0W3; Q922I7; Q8C2R5; Q8BGJ5; Q5RJV5; Q6NZB8; Q3U5I2; Q3T984; Q80T07 Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=2; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypirimidine tract binding protein OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1 0 2 2 0.1488 0 1 1 1 451.76636 902.52544 902.5257 -0.29 -0.00013 0/0 0 0 138153888 HCD 30 MS2 2.582577 531.9 10.133 33.8493 7321 7321 7317 QEplus033719.raw F4 546.1 587.4 519.4 319.4 811.3 408 171 2.15 1 FALSE 0.001177 0.01594 0.321 -250 19995 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDQALTEEHAR [R].rDQALTEEHAR.[Q] N-Term(TMT6plex) 3 A1BN54; Q7TPR4 Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1;Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 Q99LJ3; A1BN54; Q7TPR4 Actn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Actn1 PE=2 SV=1; Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1; Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 1 4 4 0.6029 0 1 1 1 389.46066 1554.82082 1554.81858 1.44 0.00056 0/0 0 0 59630096 HCD 30 MS2 9.047132 136.3 21.225 33.8516 7322 7322 7317 QEplus033719.raw F4 178.9 111.3 150 108.4 136.2 132.8 266 6.17 2 FALSE 1.14E-05 1.56E-11 2.15 -250 19999 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQRPEAIR [R].gQRPEAIR.[T] N-Term(TMT6plex) 1 Q8BH64 EH domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ehd2 PE=1 SV=1 Q8BH64 EH domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ehd2 PE=1 SV=1 0 3 3 0.3391 0 1 1 1 385.89844 1155.68076 1155.67957 1.03 0.0004 0/0 0 0 21424154 HCD 30 MS2 31.8852 286.4 45.594 33.8538 7323 7323 7317 QEplus033719.raw F4 275.2 324.9 301.8 170.9 386.7 259.1 166 3.45 1 FALSE 0.000108 0.003042 0.557 -250 20008 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGESEFSR [R].rGESEFSR.[L] N-Term(TMT6plex) 3 V9GXX7 DNA repair protein SWI5 homolog (Fragment) OS=Mus musculus OX=10090 GN=Swi5 PE=1 SV=1 A2AN40; V9GXX7; A0A0A0MQ99 DNA repair protein SWI5 homolog OS=Mus musculus OX=10090 GN=Swi5 PE=1 SV=3; DNA repair protein SWI5 homolog (Fragment) OS=Mus musculus OX=10090 GN=Swi5 PE=1 SV=1; DNA repair protein SWI5 homolog OS=Mus musculus OX=10090 GN=Swi5 PE=1 SV=2 1 3 3 0.6349 0 1 1 1 399.54504 1196.62058 1196.62212 -1.28 -0.00051 0/0 0 0 14501231 HCD 30 MS2 61.09074 179.3 62.202 33.8584 7325 7325 7317 QEplus033719.raw F4 186.1 146.2 199.8 132.7 214.8 196.4 188 3.04 1 FALSE 1.14E-05 0.0005063 0.721 -250 20012 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQQEAEAAQR [R].aQQEAEAAQR.[L] N-Term(TMT6plex) 1 Q9D1E6 Tubulin-folding cofactor B OS=Mus musculus OX=10090 GN=Tbcb PE=1 SV=2 Q9D1E6 Tubulin-folding cofactor B OS=Mus musculus OX=10090 GN=Tbcb PE=1 SV=2 0 2 2 0.5714 0 1 1 1 665.85046 1330.69365 1330.69126 1.8 0.0012 0/0 0 0 4710804.5 HCD 30 MS2 7.085985 207.3 110 33.8632 7327 7327 7317 QEplus033719.raw F4 210.6 181.7 169.2 161 322.4 198.7 169 3.71 1 FALSE 1.14E-05 1.08E-08 1.611 -250 20018 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DMAEAR [R].dMAEAR.[E] N-Term(TMT6plex) 5 Q3THC1 26S proteasome non-ATPase regulatory subunit 9 OS=Mus musculus OX=10090 GN=Psmd9 PE=2 SV=1 Q3THC1; Q9CR00; A0A0G2JGN6; Q3ULI3; Q9CZZ4 26S proteasome non-ATPase regulatory subunit 9 OS=Mus musculus OX=10090 GN=Psmd9 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 9 OS=Mus musculus OX=10090 GN=Psmd9 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 9 (Fragment) OS=Mus musculus OX=10090 GN=Psmd9 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psmd9 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 9 OS=Mus musculus OX=10090 GN=Psmd9 PE=2 SV=1 0 2 2 0.2622 0 1 1 1 461.23654 921.46581 921.46613 -0.35 -0.00016 0/0 0 0 27559432 HCD 30 MS2 10.01922 585.4 57.595 33.8705 7329 7329 7328 QEplus033719.raw F4 668.7 483.6 657.1 472.9 684.1 546.1 36 2.25 1 FALSE 0.005586 0.09423 0.022 -250 20028 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIQNTGDR [K].eIQNTGDR.[L] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.1958 0 1 1 1 581.30695 1161.60661 1161.60613 0.42 0.00024 0/0 0 0 8748769 HCD 30 MS2 0 384.1 110 33.873 7330 7330 7328 QEplus033719.raw F4 432.3 327.7 373.2 350.1 477.9 343.2 188 2.86 2 FALSE 1.14E-05 0.0001594 0.818 -250 20033 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLEDGR [K].qLEDGR.[T] N-Term(TMT6plex) 18 P62984; P62983 Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2;Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2 E9Q5F6; P62984; Q922Z8; Q922B0; Q3TH47; Q5SX22; E9Q4P0; P62983; Q78XY9; E9Q9J0; Q8R0Z9; B0LAC2; Q8C2K3; Q8VC46; A5JUZ1; A0A0A6YW67; E9QNP0; P0CG50 Polyubiquitin-C (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=1; Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Polyubiquitin-B (Fragment) OS=Mus musculus OX=10090 GN=Ubb PE=4 SV=2; KxDL motif-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2; Ubiquitin B OS=Mus musculus OX=10090 GN=Ubb PE=2 SV=1; 60S ribosomal protein L40 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=3 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiquitin A-52 residue ribosomal protein fusion product 1 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubb-ps PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiqutin subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Predicted pseudogene 8797 OS=Mus musculus OX=10090 GN=Gm8797 PE=4 SV=1; 60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Polyubiquitin-C OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=2 0 2 2 0.3468 0 1 1 1 473.76166 946.51604 946.51553 0.54 0.00026 0/0 0 0 67648904 HCD 30 MS2 14.44139 600.3 20.395 33.8753 7331 7331 7328 QEplus033719.raw F4 697.8 477.7 603.6 486.6 745.5 590.4 177 2.22 2 FALSE 0.002343 0.04678 0.152 -250 20038 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPPGSSSAGTQSSTSNR [K].tPPGSSSAGTQSSTSNR.[L] N-Term(TMT6plex) 3 Q9DBR7 Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2 Q3TS88; Q9DBR7; Q9DBR7-2 PRKG1_interact domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ppp1r12a PE=2 SV=1; Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2; Isoform 2 of Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a 0 3 3 0.794 0 1 1 1 617.6402 1850.90604 1850.90416 1.01 0.00063 0/0 0 0 11999379 HCD 30 MS2 0 85.3 110 33.8778 7332 7332 7328 QEplus033719.raw F4 91.7 70 92.1 67.5 107.2 83.2 148 6.7 1 FALSE 1.14E-05 2.85E-11 2.101 -250 20046 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVAQQEAER [K].qVAQQEAER.[A] N-Term(TMT6plex) 2 P67778 Prohibitin OS=Mus musculus OX=10090 GN=Phb PE=1 SV=1 P67778; Q5SQG5 Prohibitin OS=Mus musculus OX=10090 GN=Phb PE=1 SV=1; Prohibitin (Fragment) OS=Mus musculus OX=10090 GN=Phb PE=1 SV=1 0 2 2 0.5821 0 1 1 1 644.34698 1287.68669 1287.68544 0.97 0.00062 0/0 0 0 10283938 HCD 30 MS2 7.77961 367.6 110 33.8828 7334 7334 7328 QEplus033719.raw F4 387.9 305.2 421 367.1 316.3 408.1 261 3.35 1 FALSE 1.14E-05 9.21E-07 1.244 -250 20053 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRPGPPGTAGAR [R].gRPGPPGTAGAR.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 2 2 0.3415 0 1 1 1 661.87817 1322.74907 1322.74905 0.02 0.00001 0/0 0 0 3773778 HCD 30 MS2 0 55.6 110 33.8853 7335 7335 7328 QEplus033719.raw F4 55.8 56 67.8 25.2 67.9 60.8 440 2.05 1 FALSE 1.14E-05 7.36E-05 0.882 -250 20062 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRGFGSEEGSR [K].gRGFGSEEGSR.[A] N-Term(TMT6plex) 2 A0A0G2JFX7 RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a PE=1 SV=1 A0A0G2JFX7; Q9CWZ3 RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a PE=1 SV=1; RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a PE=1 SV=4 1 3 3 0.6875 0 1 1 1 456.56641 1367.68467 1367.68651 -1.35 -0.00061 0/0 0 0 2352269 HCD 30 MS2 59.33352 211.2 110 33.8878 7336 7336 7328 QEplus033719.raw F4 230 181.8 244.8 163.8 231.6 215.1 143 4.16 1 FALSE 1.14E-05 2.41E-07 1.355 -250 20080 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRDYSGSQGGYDR [R].sRDYSGSQGGYDR.[Y] N-Term(TMT6plex) 1 O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 1 2 2 0.6429 0 1 1 1 838.89569 1676.78411 1676.78259 0.9 0.00076 0/0 0 0 5327365.5 HCD 30 MS2 0 41 110 33.9002 7340 7340 7339 QEplus033719.raw F4 37.1 48.5 46.9 20.7 62.4 30.1 61 2.66 1 FALSE 1.14E-05 2.01E-05 0.99 -250 20087 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDQALTEEHAR [R].rDQALTEEHAR.[Q] N-Term(TMT6plex) 3 A1BN54; Q7TPR4 Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1;Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 Q99LJ3; A1BN54; Q7TPR4 Actn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Actn1 PE=2 SV=1; Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1; Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 1 2 2 0.6481 0 1 1 1 777.91345 1554.81963 1554.81858 0.67 0.00052 0/0 0 0 4865413.5 HCD 30 MS2 0 32.5 110 33.9027 7341 7341 7339 QEplus033719.raw F4 31.4 33.3 36.1 20.7 39.3 34.3 262 3.78 2 FALSE 1.14E-05 7.55E-08 1.45 -250 20092 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELDGERER [R].eLDGERER.[R] N-Term(TMT6plex) 1 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 1 3 3 0.3935 0 1 1 1 411.55252 1232.64301 1232.64324 -0.19 -0.00008 0/0 0 0 35283132 HCD 30 MS2 15.2286 431.6 42.549 33.905 7342 7342 7339 QEplus033719.raw F4 469.8 419.1 394 272.9 706.7 327.3 209 2.77 1 FALSE 1.14E-05 0.0009162 0.67 -250 20099 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSHGVAQVR [R].dSHGVAQVR.[F] N-Term(TMT6plex) 2 Q5BLJ7 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1 Q921R2; Q5BLJ7 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1; 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1 0 3 3 0.6574 0 1 1 1 399.88995 1197.65531 1197.65375 1.3 0.00052 0/0 0 0 7189632.5 HCD 30 MS2 39.21369 231.4 110 33.9074 7343 7343 7339 QEplus033719.raw F4 267.7 183.4 256.8 168.6 263 249 200 3.24 1 FALSE 1.14E-05 9.45E-07 1.242 -250 20104 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRGEEDADGSK [K].dRGEEDADGSk.[T] N-Term(TMT6plex); K11(TMT6plex) 15 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 Q3UZD9; Q6NZJ6-2; A0PJB5; A0A0J9YVC1; E9Q9E1; Q3UQI5; Q3UYM6; E9Q770; E9PVC5; E9PVC6; A0A0J9YUS5; A0A0J9YUC1; Q6EVH9; Q6NZJ6; Q3UTK0 MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; eIF4GI protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 1 3 3 0.6078 0 1 1 1 546.27795 1636.81931 1636.81786 0.88 0.00048 0/0 0 0 4502287 HCD 30 MS2 55.80077 237.4 110 33.9099 7344 7344 7339 QEplus033719.raw F4 399.8 145.8 260.9 195.1 186.3 236.4 174 3.34 1 FALSE 1.14E-05 2.03E-06 1.179 -250 20110 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REPLPSRR [R].rEPLPSRR.[D] N-Term(TMT6plex) 6 Q9WV02; Q91VM5 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1;RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" A2AFI3; Q9WV02-2; A0A2I3BRL8; Q9WV02; Q91VM5; S4R1F6 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; Isoform 2 of RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx; Predicted gene 7324 OS=Mus musculus OX=10090 GN=Gm7324 PE=4 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1" 2 3 3 0.2311 0 1 1 1 413.92084 1239.74796 1239.74832 -0.29 -0.00012 0/0 0 0 8336804.5 HCD 30 MS2 53.6216 182.8 77.186 33.9122 7345 7345 7339 QEplus033719.raw F4 187.5 165 183.1 143.7 253.2 164.5 239 2.64 2 FALSE 0.001591 0.02491 0.245 -250 20122 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPPGSSSAGTQSSTSNR [K].tPPGSSSAGTQSSTSNR.[L] N-Term(TMT6plex) 3 Q9DBR7 Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2 Q3TS88; Q9DBR7; Q9DBR7-2 PRKG1_interact domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ppp1r12a PE=2 SV=1; Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2; Isoform 2 of Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a 0 2 2 0.7797 0 1 1 1 925.95624 1850.9052 1850.90416 0.56 0.00052 0/0 0 0 3762335 HCD 30 MS2 0 52.9 110 33.9172 7347 7347 7339 QEplus033719.raw F4 52.7 44.5 65.9 42.4 62.1 49.6 145 3.95 1 FALSE 1.14E-05 6.31E-16 3.358 -250 20130 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MRAESTANAGQSDNR [R].mRAESTANAGQSDNR.[S] N-Term(TMT6plex) 7 E9Q804 Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=3 E9Q804; Q99NH0-2; A0A0G2JDZ9; A0A1W2P6X1; Q99NH0; Q99NH0-3; E9QKG6 Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=3; Isoform 2 of Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17; Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=1; Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=1; Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=2; Isoform 3 of Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17; Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=1 1 3 3 0.7408 0 1 1 1 612.96527 1836.88126 1836.88199 -0.4 -0.00024 0/0 0 0 2434864.25 HCD 30 MS2 0 67.1 110 33.9197 7348 7348 7339 QEplus033719.raw F4 69.9 62.9 71.4 47.5 82.6 68.4 88 5.71 1 FALSE 1.14E-05 4.14E-15 2.829 -250 20146 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSEDSSAEDKDR [K].nSEDSSAEDkDR.[M] N-Term(TMT6plex); K10(TMT6plex) 2 E9PX53 Serine/threonine-protein phosphatase 4 regulatory subunit 1 OS=Mus musculus OX=10090 GN=Ppp4r1 PE=1 SV=1 E9PX53; E9QPR5 Serine/threonine-protein phosphatase 4 regulatory subunit 1 OS=Mus musculus OX=10090 GN=Ppp4r1 PE=1 SV=1; Serine/threonine-protein phosphatase 4 regulatory subunit 1 OS=Mus musculus OX=10090 GN=Ppp4r1 PE=1 SV=1 1 3 3 0.4583 0 1 1 1 604.29669 1810.87552 1810.88192 -3.53 -0.00213 0/0 0 0 2353060.5 HCD 30 MS2 0 90.8 110 33.9321 7352 7352 7350 QEplus033719.raw F4 95.6 89.9 107.3 82.1 95.8 74.1 109 2.64 1 FALSE 1.14E-05 6.55E-05 0.892 -250 20151 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQRPEAIR [R].gQRPEAIR.[T] N-Term(TMT6plex) 1 Q8BH64 EH domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ehd2 PE=1 SV=1 Q8BH64 EH domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ehd2 PE=1 SV=1 0 2 2 0.1163 0 1 1 1 578.34357 1155.67986 1155.67957 0.25 0.00014 0/0 0 0 9170353 HCD 30 MS2 11.24119 215.9 110 33.9346 7353 7353 7350 QEplus033719.raw F4 197.8 228.5 221.1 160.8 279.4 207.7 183 1.72 1 FALSE 0.0006383 0.009788 0.408 -250 20160 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPEEVNR [R].gPEEVNR.[L] N-Term(TMT6plex) 1 Q9DBJ3 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 OS=Mus musculus OX=10090 GN=Baiap2l1 PE=1 SV=1 Q9DBJ3 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 OS=Mus musculus OX=10090 GN=Baiap2l1 PE=1 SV=1 0 2 2 0.2736 0 1 1 1 515.2807 1029.55412 1029.55264 1.44 0.00074 0/0 0 0 3823775.5 HCD 30 MS2 49.21403 450.3 110 33.9371 7354 7354 7350 QEplus033719.raw F4 583.7 184.6 381.6 544.6 593.1 414.2 159 2.01 1 FALSE 0.002869 0.05616 0.124 -250 20178 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAEGCSTEEGSGGR [K].kAEGcSTEEGSGGR.[G] N-Term(TMT6plex); K1(TMT6plex); C5(Carbamidomethyl) 2 A0A2R8VK76 Cleavage and polyadenylation-specificity factor subunit 1 OS=Mus musculus OX=10090 GN=Cpsf1 PE=1 SV=1 A0A2R8VK76; Q9EPU4 Cleavage and polyadenylation-specificity factor subunit 1 OS=Mus musculus OX=10090 GN=Cpsf1 PE=1 SV=1; Cleavage and polyadenylation specificity factor subunit 1 OS=Mus musculus OX=10090 GN=Cpsf1 PE=1 SV=1 1 3 3 0.788 0 1 1 1 628.31665 1882.9354 1882.93291 1.32 0.00083 0/0 0 0 1826251.75 HCD 30 MS2 0 111.1 110 33.9421 7356 7356 7350 QEplus033719.raw F4 119.3 95 122.9 93.9 149.5 86 162 3.49 1 FALSE 1.14E-05 2.72E-12 2.294 -250 20185 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAGSDAAASRPR [K].kAGSDAAASRPR.[A] N-Term(TMT6plex); K1(TMT6plex) 2 P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 Q3UFI4; P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=2 SV=1; 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 1 3 3 0.626 0 1 1 1 548.99017 1644.95597 1644.95457 0.85 0.00046 0/0 0 0 8675315 HCD 30 MS2 28.66784 383.6 110 33.9446 7357 7357 7350 QEplus033719.raw F4 423.6 327.4 387.8 372.7 459.7 330.4 441 3.85 1 FALSE 1.14E-05 1.55E-08 1.581 -250 20193 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHVLTR [R].qHVLTR.[I] N-Term(TMT6plex) 10 Q5DTP7 DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Chd4 PE=2 SV=1 Q8BL30; E9PYU4; Q5DTP7; E9QAS5; Q6PDQ2; A2A8L1; E9PYL1; F6WR45; Q99JM0; E9QAS4 DUF1086 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Chd5 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Chd5 PE=1 SV=1; DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Chd4 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1; Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1; Chromodomain-helicase-DNA-binding protein 5 OS=Mus musculus OX=10090 GN=Chd5 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Chd5 PE=1 SV=1; Chromodomain-helicase-DNA-binding protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1; Chd4 protein (Fragment) OS=Mus musculus OX=10090 GN=Chd4 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1 0 2 2 0.3465 0 1 1 1 491.80334 982.59941 982.59953 -0.12 -0.00006 0/0 0 0 7812170.5 HCD 30 MS2 43.54455 420.4 110 33.9471 7358 7358 7350 QEplus033719.raw F4 396.6 376.5 455.3 339.1 575.7 378.9 48 2.02 1 FALSE 0.002439 0.04856 0.146 -250 20202 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGAPTAGPGSR [R].sGAPTAGPGSR.[G] N-Term(TMT6plex) 6 P80315 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3 G3UYW5; P80315; G3UXF3; Q3TII0; G5E839; G3UXG2 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1 0 2 2 0.6677 0 1 1 1 593.82196 1186.63664 1186.63777 -0.94 -0.00056 0/0 0 0 2922554.75 HCD 30 MS2 11.80579 144.6 110 33.9496 7359 7359 7350 QEplus033719.raw F4 138.3 107.2 153 116 168.4 184.7 179 3.16 1 FALSE 1.14E-05 0.0008563 0.676 -250 20210 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSEAGSSTPTTSTR [R].dSEAGSSTPTTSTR.[S] N-Term(TMT6plex) 8 Q3TKT4 Transcription activator BRG1 OS=Mus musculus OX=10090 GN=Smarca4 PE=1 SV=1 Q8R569; Q3UI73; G3UX35; Q3TKT4; Q8R0K1; A0A0R4J170; Q3TKT4-2; Q3URH5 Smarca4 protein (Fragment) OS=Mus musculus OX=10090 GN=Smarca4 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Smarca4 PE=2 SV=1; Transcription activator BRG1 (Fragment) OS=Mus musculus OX=10090 GN=Smarca4 PE=1 SV=1; Transcription activator BRG1 OS=Mus musculus OX=10090 GN=Smarca4 PE=1 SV=1; Smarca4 protein (Fragment) OS=Mus musculus OX=10090 GN=Smarca4 PE=2 SV=1; Transcription activator BRG1 OS=Mus musculus OX=10090 GN=Smarca4 PE=1 SV=1; Isoform 2 of Transcription activator BRG1 OS=Mus musculus OX=10090 GN=Smarca4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Smarca4 PE=2 SV=1 0 2 2 0.7188 0 1 1 1 813.39349 1625.77971 1625.78159 -1.16 -0.00094 0/0 0 0 2797344 HCD 30 MS2 0 64.1 110 33.9521 7360 7360 7350 QEplus033719.raw F4 57.3 74 73.5 39 88.8 51.7 98 3.84 1 FALSE 1.14E-05 4.13E-11 2.07 -250 20215 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESQELR [R].eSQELR.[SQ] N-Term(TMT6plex) 4 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q80U19-2; Q6P5H2-2; Q80U19 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Disheveled-associated activator of morphogenesis 2 OS=Mus musculus OX=10090 GN=Daam2; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes; Disheveled-associated activator of morphogenesis 2 OS=Mus musculus OX=10090 GN=Daam2 PE=1 SV=4 0 2 2 0.0718 0 1 1 2 495.77444 990.54161 990.54174 -0.13 -0.00006 0/0 0 0 78858536 HCD 30 MS2 40.38483 506.8 11.875 33.9594 7362 7362 7361 QEplus033719.raw F4 583.9 296.3 537.6 506.7 482.6 633.6 248 2.09 1 FALSE 0.007467 0.1212 -0.044 -250 20221 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGSAAQTR [R].vGSAAQTR.[A] N-Term(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 0 2 2 0.2167 0 1 1 1 509.79535 1018.58342 1018.58427 -0.84 -0.00043 0/0 0 0 1614628.125 HCD 30 MS2 74.10758 345.6 110 33.9619 7363 7363 7361 QEplus033719.raw F4 510 161.4 328.4 356.6 273.5 443.9 349 1.8 1 FALSE 0.000262 0.005296 0.494 -250 20231 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APPAGEDTR [K].aPPAGEDTR.[Q] N-Term(TMT6plex) 1 Q1XH17 Tripartite motif-containing protein 72 OS=Mus musculus OX=10090 GN=Trim72 PE=1 SV=1 Q1XH17 Tripartite motif-containing protein 72 OS=Mus musculus OX=10090 GN=Trim72 PE=1 SV=1 0 2 2 0.2733 0 1 1 1 571.8042 1142.60112 1142.60032 0.7 0.0004 0/0 0 0 13967875 HCD 30 MS2 7.522631 401.8 110 33.9644 7364 7364 7361 QEplus033719.raw F4 586.3 78.8 276 729.3 133.7 606.4 134 3.11 1 FALSE 0.0003496 0.006848 0.461 -250 20236 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYEEDGAR [K].eYEEDGAR.[S] N-Term(TMT6plex) 1 P61164 Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1 P61164 Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1 0 2 2 0.7101 0 1 1 1 599.28339 1197.5595 1197.55851 0.82 0.00049 0/0 0 0 9163486 HCD 30 MS2 25.14333 593.7 110 33.9694 7366 7366 7361 QEplus033719.raw F4 596.8 517.2 599.1 459.8 795.9 593.4 33 3.38 1 FALSE 5.44E-05 0.001751 0.611 -250 20280 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSEAGSSTPTTSTR [R].dSEAGSSTPTTSTR.[S] N-Term(TMT6plex) 8 Q3TKT4 Transcription activator BRG1 OS=Mus musculus OX=10090 GN=Smarca4 PE=1 SV=1 Q8R569; Q3UI73; G3UX35; Q3TKT4; Q8R0K1; A0A0R4J170; Q3TKT4-2; Q3URH5 Smarca4 protein (Fragment) OS=Mus musculus OX=10090 GN=Smarca4 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Smarca4 PE=2 SV=1; Transcription activator BRG1 (Fragment) OS=Mus musculus OX=10090 GN=Smarca4 PE=1 SV=1; Transcription activator BRG1 OS=Mus musculus OX=10090 GN=Smarca4 PE=1 SV=1; Smarca4 protein (Fragment) OS=Mus musculus OX=10090 GN=Smarca4 PE=2 SV=1; Transcription activator BRG1 OS=Mus musculus OX=10090 GN=Smarca4 PE=1 SV=1; Isoform 2 of Transcription activator BRG1 OS=Mus musculus OX=10090 GN=Smarca4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Smarca4 PE=2 SV=1 0 3 3 0.7257 0 1 1 1 542.59827 1625.78025 1625.78159 -0.83 -0.00045 0/0 0 0 3205543.75 HCD 30 MS2 37.30058 82.2 110 33.9917 7374 7374 7372 QEplus033719.raw F4 95.9 69.5 85.7 74 87.5 80.6 98 5.25 1 FALSE 1.14E-05 2.00E-11 2.13 -250 20300 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVNNVTSER [R].rVNNVTSER.[L] N-Term(TMT6plex) 5 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; A0A571BF46; A2AQB2; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 1 3 3 0.5086 0 1 1 1 435.24811 1303.72977 1303.72798 1.38 0.0006 0/0 0 0 11937192 HCD 30 MS2 27.00419 291 110 33.9987 7377 7377 7372 QEplus033719.raw F4 329.6 147.8 274.1 363.8 213.5 417.1 444 4.09 1 FALSE 1.14E-05 1.86E-06 1.186 -250 20307 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVPSER [K].nVPSER.[I] N-Term(TMT6plex) 2 A0A3Q4L2Q3 "Poly(A) RNA polymerase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Mtpap PE=1 SV=1" A0A3Q4L2Q3; Q9D0D3 "Poly(A) RNA polymerase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Mtpap PE=1 SV=1; Poly(A) RNA polymerase, mitochondrial OS=Mus musculus OX=10090 GN=Mtpap PE=1 SV=1" 0 2 2 0.3978 0 1 1 1 465.76389 930.52049 930.52061 -0.12 -0.00006 0/0 0 0 5058605.5 HCD 30 MS2 14.18447 397.7 110 34.0012 7378 7378 7372 QEplus033719.raw F4 453.8 286 444.1 413.4 397.9 390.8 123 1.86 1 FALSE 0.002148 0.04079 0.172 -250 20318 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YEAACNR [R].yEAAcNR.[L] N-Term(TMT6plex); C5(Carbamidomethyl) 2 Q9CS46 PPM-type phosphatase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ilkap PE=2 SV=1 Q9CS46; Q8R0F6 PPM-type phosphatase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ilkap PE=2 SV=1; Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Mus musculus OX=10090 GN=Ilkap PE=1 SV=1 0 2 2 0.6872 0 1 1 1 556.77167 1112.53606 1112.53561 0.4 0.00022 0/0 0 0 4161457 HCD 30 MS2 10.2654 276 110 34.0062 7380 7380 7372 QEplus033719.raw F4 296.8 242.1 271.4 217.4 380.8 247.7 62 2.27 1 FALSE 0.001395 0.01994 0.282 -250 20335 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAGSDAAASRPR [K].kAGSDAAASRPR.[A] N-Term(TMT6plex); K1(TMT6plex) 2 P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 Q3UFI4; P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=2 SV=1; 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 1 2 2 0.5547 0 1 1 1 822.98102 1644.95476 1644.95457 0.11 0.00009 0/0 0 0 3768659.5 HCD 30 MS2 0 53.5 110 34.021 7385 7385 7383 QEplus033719.raw F4 54.3 36.6 64.7 62.7 55.9 46.9 452 2.56 1 FALSE 1.14E-05 3.09E-06 1.144 -250 20350 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGNPGSDGPPGR [R].dGNPGSDGPPGR.[D] N-Term(TMT6plex) 5 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q91VL4; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Col1a2 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.7798 0 1 1 1 677.83203 1354.65679 1354.65487 1.41 0.00096 0/0 0 0 6986007.5 HCD 30 MS2 0 166.9 110 34.0258 7387 7387 7383 QEplus033719.raw F4 147.6 174.6 219.2 73.5 202.1 184.5 86 3.27 1 FALSE 1.14E-05 5.38E-08 1.478 -250 20357 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTNADRDNLTR [R].gTNADRDNLTR.[R] N-Term(TMT6plex) 3 Q9D089 Uncharacterized protein OS=Mus musculus OX=10090 GN=Casp6 PE=2 SV=1 Q9D089; Q99M47; O08738 Uncharacterized protein OS=Mus musculus OX=10090 GN=Casp6 PE=2 SV=1; Caspase 6 OS=Mus musculus OX=10090 GN=Casp6 PE=2 SV=1; Caspase-6 OS=Mus musculus OX=10090 GN=Casp6 PE=1 SV=1 1 3 3 0.4676 0 1 1 1 487.92545 1461.76178 1461.76073 0.72 0.00035 0/0 0 0 5153831.5 HCD 30 MS2 35.84884 316.3 110 34.0283 7388 7388 7383 QEplus033719.raw F4 345.7 272.5 340.3 244.3 382.3 312.8 243 3.55 1 FALSE 1.14E-05 1.46E-06 1.206 -250 20363 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAVESGQADDER [K].sAVESGQADDER.[V] N-Term(TMT6plex) 3 Q61249 Immunoglobulin-binding protein 1 OS=Mus musculus OX=10090 GN=Igbp1 PE=1 SV=1 Q9QZ29; Q61249; A0A0B4J1F7 Immunoglobulin-binding protein 1b OS=Mus musculus OX=10090 GN=Igbp1b PE=1 SV=1; Immunoglobulin-binding protein 1 OS=Mus musculus OX=10090 GN=Igbp1 PE=1 SV=1; Immunoglobulin-binding protein 1b OS=Mus musculus OX=10090 GN=Igbp1b PE=1 SV=1 0 2 2 0.7456 0 1 1 1 746.85754 1492.70781 1492.7077 0.08 0.00006 0/0 0 0 4682432 HCD 30 MS2 0 101.8 110 34.0308 7389 7389 7383 QEplus033719.raw F4 97.2 83.3 115.3 92.1 95.7 127.3 66 4.01 1 FALSE 1.14E-05 1.44E-11 2.157 -250 20377 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGAPTAGPGSR [R].sGAPTAGPGSR.[G] N-Term(TMT6plex) 6 P80315 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3 G3UYW5; P80315; G3UXF3; Q3TII0; G5E839; G3UXG2 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1 0 2 2 0.6732 0 1 1 1 593.81866 1186.63005 1186.63777 -6.5 -0.00386 0/0 0 0 2612257.5 HCD 30 MS2 19.16223 187.4 110 34.0383 7392 7392 7383 QEplus033719.raw F4 202.7 103.5 199.2 190.4 175.2 253.3 165 2.54 1 FALSE 3.35E-05 0.001334 0.636 -250 20383 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EELESHR [K].eELESHR.[A] N-Term(TMT6plex) 25 D3Y273 Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=2 D3Y273; F8VQC9; A0A286YCX8; Q8BTY2; J9RDH0; Q8BTY2-2; J9S4N6; A0A286YD46; A0A286YDK8; I1VGT4; J9RZB2; E3UVT9; I1VGT5; E3UVT8; A0A286YCX2; A0A286YCS4; I1VGT6; U3RF68; J9S7F7; H6WZ45; J9RV59; D3Y272; J7H931; H6WZF5; A0A286YDJ7 Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=2; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=2; Sodium bicarbonate cotransporter 3 OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=2; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Isoform 2 of Sodium bicarbonate cotransporter 3 OS=Mus musculus OX=10090 GN=Slc4a7; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=2 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=2; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=2; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=2 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=2; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=2 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=2 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=2 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein (Fragment) OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=2 0 2 2 0.4847 0 1 1 1 564.79828 1128.58928 1128.58467 4.09 0.00231 0/0 0 0 1841740.5 HCD 30 MS2 46.38797 199.2 110 34.0408 7393 7393 7383 QEplus033719.raw F4 214 118.6 192 178.6 242.4 249.5 138 1.96 1 FALSE 0.001658 0.02723 0.231 -250 20390 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVNNVTSER [R].rVNNVTSER.[L] N-Term(TMT6plex) 5 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; A0A571BF46; A2AQB2; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 1 2 2 0.3357 0 1 1 1 652.36798 1303.72869 1303.72798 0.54 0.00035 0/0 0 0 2350890 HCD 30 MS2 0 45.2 110 34.0481 7395 7395 7394 QEplus033719.raw F4 44.4 24.2 39.6 60.5 30.9 71.3 418 2.8 1 FALSE 1.14E-05 1.33E-06 1.214 -250 20400 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAGSDAAASRPR [K].kAGSDAAASRPR.[A] N-Term(TMT6plex); K1(TMT6plex) 2 P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 Q3UFI4; P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=2 SV=1; 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 1 4 4 0.6593 0 1 1 1 411.99426 1644.95522 1644.95457 0.39 0.00016 0/0 0 0 267833344 HCD 30 MS2 39.424 493.7 4.469 34.0526 7397 7397 7394 QEplus033719.raw F4 501.1 386.7 511.5 472 691.4 399.5 454 3.61 1 FALSE 1.14E-05 1.58E-05 1.01 -250 20409 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YEEHVR [K].yEEHVR.[E] N-Term(TMT6plex) 5 Q80W39 "Splicing factor 3b, subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1" Q80W39; Q3UAI4; Q3UBH2; Q8BL33; Q3UJB0 "Splicing factor 3b, subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; SAP domain-containing protein OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; SAP domain-containing protein OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; PSP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; Splicing factor 3b, subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=1 SV=1" 0 3 3 0.1529 0 1 1 1 354.52432 1061.55841 1061.55772 0.65 0.00023 0/0 0 0 19913234 HCD 30 MS2 4.472368 229.8 64.124 34.0549 7398 7398 7394 QEplus033719.raw F4 247.9 200.8 229.6 176.2 309.9 214.2 192 3.4 1 FALSE 1.14E-05 0.000607 0.706 -250 20414 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPSAAPAR [K].ePSAAPAR.[K] N-Term(TMT6plex) 4 Q0GNC1 Inverted formin-2 OS=Mus musculus OX=10090 GN=Inf2 PE=1 SV=1 Q0GNC1; E9QLA5; Q0GNC1-3; A0A1Y7VM80 Inverted formin-2 OS=Mus musculus OX=10090 GN=Inf2 PE=1 SV=1; Inverted formin-2 OS=Mus musculus OX=10090 GN=Inf2 PE=1 SV=1; Isoform 2 of Inverted formin-2 OS=Mus musculus OX=10090 GN=Inf2; Inverted formin-2 (Fragment) OS=Mus musculus OX=10090 GN=Inf2 PE=1 SV=1 0 2 2 0.4603 0 1 1 1 514.29071 1027.57414 1027.57337 0.75 0.00038 0/0 0 0 18230870 HCD 30 MS2 4.309213 544.8 110 34.0574 7399 7399 7394 QEplus033719.raw F4 556 485.3 487.3 390.8 849.2 500.3 96 2.52 1 FALSE 1.14E-05 0.0002657 0.776 -250 20417 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDSARPGAHAK [R].eDSARPGAHAk.[V] N-Term(TMT6plex); K11(TMT6plex) 1 Q9CX86 Heterogeneous nuclear ribonucleoprotein A0 OS=Mus musculus OX=10090 GN=Hnrnpa0 PE=1 SV=1 Q9CX86 Heterogeneous nuclear ribonucleoprotein A0 OS=Mus musculus OX=10090 GN=Hnrnpa0 PE=1 SV=1 0 4 4 0.6084 0 1 1 1 399.97641 1596.88381 1596.88582 -1.26 -0.0005 0/0 0 0 13628541 HCD 30 MS2 19.01086 379.8 77.245 34.0596 7400 7400 7394 QEplus033719.raw F4 904.7 238.2 330.3 310.7 243.1 251.6 366 4.06 1 FALSE 1.14E-05 1.13E-06 1.227 -250 20430 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EELESHR [K].eELESHR.[A] N-Term(TMT6plex) 25 D3Y273 Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=2 D3Y273; F8VQC9; A0A286YCX8; Q8BTY2; J9RDH0; Q8BTY2-2; J9S4N6; A0A286YD46; A0A286YDK8; I1VGT4; J9RZB2; E3UVT9; I1VGT5; E3UVT8; A0A286YCX2; A0A286YCS4; I1VGT6; U3RF68; J9S7F7; H6WZ45; J9RV59; D3Y272; J7H931; H6WZF5; A0A286YDJ7 Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=2; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=2; Sodium bicarbonate cotransporter 3 OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=2; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Isoform 2 of Sodium bicarbonate cotransporter 3 OS=Mus musculus OX=10090 GN=Slc4a7; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=2 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=2; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=2; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=2 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=2; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=2 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=2 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=2 SV=1; Anion exchange protein OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=1; Anion exchange protein (Fragment) OS=Mus musculus OX=10090 GN=Slc4a7 PE=1 SV=2 0 3 3 0.5569 0 1 1 1 376.86694 1128.58628 1128.58467 1.43 0.00054 0/0 0 0 7018583.5 HCD 30 MS2 37.56761 323.4 110 34.0646 7402 7402 7394 QEplus033719.raw F4 470.2 215.9 339.1 298.9 282.9 333.1 120 3.34 1 FALSE 1.14E-05 0.0005649 0.712 -250 20435 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTQESIQR [K].qTQESIQR.[F] N-Term(TMT6plex) 4 D3YXF2 Putative monooxygenase p33MONOX (Fragment) OS=Mus musculus OX=10090 GN=4833439L19Rik PE=1 SV=1 D3YXF2; Q9DBN4-3; D3Z1F7; Q9DBN4 Putative monooxygenase p33MONOX (Fragment) OS=Mus musculus OX=10090 GN=4833439L19Rik PE=1 SV=1; Isoform 3 of Putative monooxygenase p33MONOX OS=Mus musculus OX=10090 GN=P33monox; Putative monooxygenase p33MONOX OS=Mus musculus OX=10090 GN=4833439L19Rik PE=1 SV=1; Putative monooxygenase p33MONOX OS=Mus musculus OX=10090 GN=P33monox PE=1 SV=1 0 2 2 0.3948 0 1 1 1 609.83539 1218.6635 1218.66398 -0.39 -0.00024 0/0 0 0 3525881.5 HCD 30 MS2 14.95104 156.7 110 34.0671 7403 7403 7394 QEplus033719.raw F4 158.5 107.8 182.7 138.4 151.4 201.3 341 3.09 1 FALSE 1.14E-05 2.38E-05 0.976 -250 20443 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQTAEK [K].nQTAEk.[E] N-Term(TMT6plex); K6(TMT6plex) 15 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 0 2 2 0.3832 0 1 1 1 574.83844 1148.6696 1148.66756 1.78 0.00102 0/0 0 0 3142505.25 HCD 30 MS2 41.28267 327.4 110 34.0697 7404 7404 7394 QEplus033719.raw F4 369.3 184.5 313.2 219.7 424.3 453.5 340 2.14 1 FALSE 0.004165 0.07634 0.071 -250 20451 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RASAGECLR [K].rASAGEcLR.[H] N-Term(TMT6plex); C7(Carbamidomethyl) 6 A0A0R4J124 SRSF protein kinase 2 OS=Mus musculus OX=10090 GN=Srpk2 PE=1 SV=1 A0A0R4J124; Q3UF35; Q8CEC7; Q8CBI1; Q8C9R8; O54781 SRSF protein kinase 2 OS=Mus musculus OX=10090 GN=Srpk2 PE=1 SV=1; Protein kinase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Srpk2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Srpk2 PE=2 SV=1; Protein kinase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Srpk2 PE=2 SV=1; Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Srpk2 PE=2 SV=1; SRSF protein kinase 2 OS=Mus musculus OX=10090 GN=Srpk2 PE=1 SV=2 1 3 3 0.4987 0 1 1 1 416.89395 1248.6673 1248.66802 -0.58 -0.00024 0/0 0 0 4625797 HCD 30 MS2 36.67005 375.6 110 34.0769 7406 7406 7405 QEplus033719.raw F4 604.8 252.8 391.1 314 353.3 337.4 276 3.89 1 FALSE 3.35E-05 0.001144 0.65 -250 20458 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQSEGRPCEYNSR [R].aQSEGRPcEYNSR.[I] N-Term(TMT6plex); C8(Carbamidomethyl) 1 Q3TX21 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ccn1 PE=2 SV=1 Q3TX21 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ccn1 PE=2 SV=1 0 3 3 0.6711 0 1 1 1 594.9527 1782.84354 1782.83906 2.51 0.00149 0/0 0 0 1878583 HCD 30 MS2 25.12163 149.3 110 34.0795 7407 7407 7405 QEplus033719.raw F4 166.9 108.1 128.6 124.4 239.4 128.3 78 3.74 1 FALSE 1.14E-05 1.95E-07 1.372 -250 20465 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERPEREPK [K].eRPEREPk.[L] N-Term(TMT6plex); K8(TMT6plex) 7 Q8R550-3 Isoform 3 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1 Q8R550-4; Q8R550-3; Q8R550; E9Q0C1; Q3TSX2; Q8R550-5; Q3TA88 Isoform 4 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1; Isoform 3 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1; SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=1 SV=1; SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=1 SV=1; SH3 domain-containing protein OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=2 SV=1; Isoform 5 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=2 SV=1 1 4 4 0.3562 0 1 1 1 375.47464 1498.87673 1498.8742 1.69 0.00063 0/0 0 0 22195884 HCD 30 MS2 17.41719 311 43.38 34.0817 7408 7408 7405 QEplus033719.raw F4 456.1 260.4 361 291.7 256.3 240.4 341 2.33 1 FALSE 0.005189 0.08875 0.038 -250 20486 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDATVQTER [K].qDATVQTER.[G] N-Term(TMT6plex) 4 A0A5H1ZRL7 Transformation-related protein 53-binding protein 1 OS=Mus musculus OX=10090 GN=Trp53bp1 PE=1 SV=1 P70399-6; P70399-5; A0A5H1ZRL7; P70399 Isoform 3 of TP53-binding protein 1 OS=Mus musculus OX=10090 GN=Tp53bp1; Isoform 2 of TP53-binding protein 1 OS=Mus musculus OX=10090 GN=Tp53bp1; Transformation-related protein 53-binding protein 1 OS=Mus musculus OX=10090 GN=Trp53bp1 PE=1 SV=1; TP53-binding protein 1 OS=Mus musculus OX=10090 GN=Tp53bp1 PE=1 SV=3 0 2 2 0.5296 0 1 1 1 638.83917 1276.67107 1276.66946 1.26 0.0008 0/0 0 0 7453794.5 HCD 30 MS2 4.663062 235.7 110 34.0888 7411 7411 7405 QEplus033719.raw F4 227.7 188.2 261.4 212.3 227.9 296.8 234 3.21 1 FALSE 1.14E-05 1.22E-06 1.221 -250 20497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVACTER [R].dVAcTER.[R] N-Term(TMT6plex); C4(Carbamidomethyl) 7 A0A7R7YCL1 GDNF receptor alpha 1e OS=Mus musculus OX=10090 GN=GFRalpha-1 PE=2 SV=1 A0A7R7YCL1; A0A097BVN3; D6RDD4; P97785-2; P97785; A0A7R7T1T1; A0A7R7YCZ3 GDNF receptor alpha 1e OS=Mus musculus OX=10090 GN=GFRalpha-1 PE=2 SV=1; GDNF family receptor alpha OS=Mus musculus OX=10090 GN=Gfra1 PE=2 SV=1; GDNF family receptor alpha-1 OS=Mus musculus OX=10090 GN=Gfra1 PE=1 SV=1; Isoform 2 of GDNF family receptor alpha-1 OS=Mus musculus OX=10090 GN=Gfra1; GDNF family receptor alpha-1 OS=Mus musculus OX=10090 GN=Gfra1 PE=1 SV=2; GDNF receptor alpha 1d OS=Mus musculus OX=10090 GN=GFRalpha-1 PE=2 SV=1; GDNF receptor alpha 1c OS=Mus musculus OX=10090 GN=GFRalpha-1 PE=2 SV=1 0 2 2 0.3682 0 1 1 1 540.27222 1079.53716 1079.53527 1.74 0.00094 0/0 0 0 3359651 HCD 30 MS2 41.67655 251.9 110 34.0938 7413 7413 7405 QEplus033719.raw F4 243.7 289.3 312.1 136.6 366.3 163.7 114 2.58 1 FALSE 6.52E-05 0.002668 0.57 -250 20516 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDSARPGAHAK [R].eDSARPGAHAk.[V] N-Term(TMT6plex); K11(TMT6plex) 1 Q9CX86 Heterogeneous nuclear ribonucleoprotein A0 OS=Mus musculus OX=10090 GN=Hnrnpa0 PE=1 SV=1 Q9CX86 Heterogeneous nuclear ribonucleoprotein A0 OS=Mus musculus OX=10090 GN=Hnrnpa0 PE=1 SV=1 0 3 3 0.5933 0 1 1 1 532.96759 1596.88822 1596.88582 1.5 0.0008 0/0 0 0 7674765.5 HCD 30 MS2 16.02476 493.9 110 34.1057 7417 7417 7416 QEplus033719.raw F4 980.8 303.1 443.2 411.6 390.2 434.2 363 3.27 1 FALSE 1.14E-05 0.0001869 0.805 -250 20525 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELDGERER [R].eLDGERER.[R] N-Term(TMT6plex) 1 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 1 2 2 0.2068 0 1 1 1 616.82599 1232.6447 1232.64324 1.18 0.00073 0/0 0 0 24819320 HCD 30 MS2 4.062172 387.5 91.809 34.1105 7419 7419 7416 QEplus033719.raw F4 401 352.8 349 305.2 596.6 320.5 190 2.66 1 FALSE 0.000108 0.003073 0.556 -250 20533 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDAPVR [R].eDAPVR.[W] N-Term(TMT6plex) 3 D3YYU8 Obscurin-like protein 1 OS=Mus musculus OX=10090 GN=Obsl1 PE=1 SV=1 Q80TU8; D3YYU8; A0A0A0MQG1 MKIAA0657 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0657 PE=4 SV=3; Obscurin-like protein 1 OS=Mus musculus OX=10090 GN=Obsl1 PE=1 SV=1; Obscurin-like protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Obsl1 PE=1 SV=1 0 2 2 0.1027 0 1 1 1 458.25912 915.51097 915.50971 1.38 0.00063 0/0 0 0 14118095 HCD 30 MS2 52.2117 642.1 90.613 34.1128 7420 7420 7416 QEplus033719.raw F4 772 401.1 607.7 777.6 576.4 717.8 85 1.85 1 FALSE 0.005667 0.09515 0.02 -250 20545 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHPPEDPR [R].aHPPEDPR.[L] N-Term(TMT6plex) 5 D3Z5N6 Zinc finger protein ubi-d4 OS=Mus musculus OX=10090 GN=Dpf2 PE=1 SV=1 F8WIP7; D3Z5N6; Q3UKV4; Q61103; A0A494BBF7 Zinc finger protein ubi-d4 (Fragment) OS=Mus musculus OX=10090 GN=Dpf2 PE=1 SV=1; Zinc finger protein ubi-d4 OS=Mus musculus OX=10090 GN=Dpf2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dpf2 PE=2 SV=1; Zinc finger protein ubi-d4 OS=Mus musculus OX=10090 GN=Dpf2 PE=1 SV=1; Zinc finger protein ubi-d4 (Fragment) OS=Mus musculus OX=10090 GN=Dpf2 PE=1 SV=1 0 3 3 0.2083 0 1 1 1 383.20663 1147.60535 1147.60574 -0.34 -0.00013 0/0 0 0 4424910.5 HCD 30 MS2 43.478 231.1 110 34.1178 7422 7422 7416 QEplus033719.raw F4 343.8 162.6 238 180.5 227.3 234.7 199 2.4 1 FALSE 0.001615 0.02621 0.237 -250 20559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGPPPPPR [R].rGPPPPPR.[S] N-Term(TMT6plex) 2 Q91VM5 "RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" A0A2I3BRL8; Q91VM5 "Predicted gene 7324 OS=Mus musculus OX=10090 GN=Gm7324 PE=4 SV=1; RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" 1 2 2 0.2821 0 1 1 1 551.83893 1102.67058 1102.66828 2.09 0.00115 0/0 0 0 3471917.75 HCD 30 MS2 71.80824 322.3 110 34.1228 7424 7424 7416 QEplus033719.raw F4 473 256.8 306.2 200 398.9 298.9 205 1.95 1 FALSE 0.001125 0.01487 0.334 -250 20569 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPPSETEGSDGR [R].sPPSETEGSDGR.[F] N-Term(TMT6plex) 1 Q91XU3 Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma OS=Mus musculus OX=10090 GN=Pip4k2c PE=1 SV=1 Q91XU3 Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma OS=Mus musculus OX=10090 GN=Pip4k2c PE=1 SV=1 0 2 2 0.6014 0 1 1 1 724.34729 1447.6873 1447.68623 0.74 0.00054 0/0 0 0 3141782.5 HCD 30 MS2 0 69.6 110 34.1253 7425 7425 7416 QEplus033719.raw F4 66.5 71.8 89.7 41.6 81.1 67.2 54 2.91 1 FALSE 1.14E-05 1.97E-05 0.991 -250 20577 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QATVEEDQR [K].qATVEEDQR.[I] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.6431 0 1 1 1 652.83655 1304.66582 1304.66437 1.11 0.00072 0/0 0 0 4271291.5 HCD 30 MS2 13.03451 152.8 110 34.1351 7428 7428 7427 QEplus033719.raw F4 181.6 21.5 100.6 315.4 33 264.5 155 3.25 2 FALSE 1.14E-05 4.46E-06 1.114 -250 20585 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDNNMPVTAR [K].dDNNmPVTAR.[V] N-Term(TMT6plex); M5(Oxidation) 1 O08709 Peroxiredoxin-6 OS=Mus musculus OX=10090 GN=Prdx6 PE=1 SV=3 O08709 Peroxiredoxin-6 OS=Mus musculus OX=10090 GN=Prdx6 PE=1 SV=3 0 2 2 0.586 0 1 1 1 689.33594 1377.6646 1377.66299 1.16 0.0008 0/0 0 0 2197424.75 HCD 30 MS2 0 47.9 110 34.1376 7429 7429 7427 QEplus033719.raw F4 51 33 56.4 34.1 57.5 55.4 73 2.15 1 FALSE 0.001824 0.03111 0.211 -250 20594 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQGQNLAR [K].eQGQNLAR.[Q] N-Term(TMT6plex) 8 C5H0E8; Q52L50 Rap1A-retro1 OS=Mus musculus OX=10090 GN=Gm9392 PE=2 SV=1;RAS related protein 1b OS=Mus musculus OX=10090 GN=Rap1b PE=1 SV=1 C5H0E8; Q3V3W9; Q52L50; C5H0E9; A0A0G2JDL9; Q3U7U8; P62835; A0A0G2JE52 Rap1A-retro1 OS=Mus musculus OX=10090 GN=Gm9392 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rap1a PE=2 SV=1; RAS related protein 1b OS=Mus musculus OX=10090 GN=Rap1b PE=1 SV=1; Rap1A-retro2 OS=Mus musculus OX=10090 GN=Rap1a PE=2 SV=1; Ras-related protein Rap-1A OS=Mus musculus OX=10090 GN=Rap1a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rap1a PE=2 SV=1; Ras-related protein Rap-1A OS=Mus musculus OX=10090 GN=Rap1a PE=1 SV=1; Ras-related protein Rap-1A OS=Mus musculus OX=10090 GN=Rap1a PE=1 SV=1 0 2 2 0.5185 0 1 1 1 572.81824 1144.6292 1144.6272 1.74 0.001 0/0 0 0 116886792 HCD 30 MS2 21.1372 421.6 10.419 34.1399 7430 7430 7427 QEplus033719.raw F4 436.1 334.3 424.5 455.2 397.1 482.4 259 2.7 2 FALSE 5.44E-05 0.002555 0.574 -250 20598 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MNTNPSR [R].mNTNPSR.[G] N-Term(TMT6plex) 10 A0A1B0GS68 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Gm45713 PE=2 SV=1 A0A1B0GS68; A0A1B0GRH1; A0A1B0GTA1; Q3TDS9; A0A1B0GSC2; P19253; A0A1B0GSJ2; A0A1B0GT00; A0A1B0GSQ6; A0A1B0GSB2 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Gm45713 PE=2 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=2 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=4; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1 0 2 2 0.3684 0 1 1 1 524.77466 1048.54204 1048.54069 1.28 0.00067 0/0 0 0 44758824 HCD 30 MS2 8.737905 628.7 32.803 34.1421 7431 7431 7427 QEplus033719.raw F4 611.7 547.5 692.8 568.5 696.2 655.4 185 2.09 1 FALSE 0.001231 0.01666 0.313 -250 20603 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERPEREPK [K].eRPEREPk.[L] N-Term(TMT6plex); K8(TMT6plex) 7 Q8R550-3 Isoform 3 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1 Q8R550-4; Q8R550-3; Q8R550; E9Q0C1; Q3TSX2; Q8R550-5; Q3TA88 Isoform 4 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1; Isoform 3 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1; SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=1 SV=1; SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=1 SV=1; SH3 domain-containing protein OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=2 SV=1; Isoform 5 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=2 SV=1 1 3 3 0.4286 0 1 1 1 500.29672 1498.87561 1498.8742 0.95 0.00047 0/0 0 0 14456593 HCD 30 MS2 17.03137 409.2 110 34.1469 7433 7433 7427 QEplus033719.raw F4 532.1 334.7 451.5 397.2 386.4 353.2 323 2.03 1 FALSE 0.001011 0.01328 0.355 -250 20611 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRAPDSGAEVER [K].nRAPDSGAEVER.[E] N-Term(TMT6plex) 3 A2ARP8 Microtubule-associated protein 1A OS=Mus musculus OX=10090 GN=Map1a PE=1 SV=1 A2ARP8; Q9QYR6; Q9QYR6-2 Microtubule-associated protein 1A OS=Mus musculus OX=10090 GN=Map1a PE=1 SV=1; Microtubule-associated protein 1A OS=Mus musculus OX=10090 GN=Map1a PE=1 SV=2; Isoform 2 of Microtubule-associated protein 1A OS=Mus musculus OX=10090 GN=Map1a 1 3 3 0.4838 0 1 1 1 510.60123 1529.78913 1529.78695 1.42 0.00073 0/0 0 0 13402479 HCD 30 MS2 43.04126 436 110 34.1494 7434 7434 7427 QEplus033719.raw F4 535.3 208.4 413.4 533.7 298.2 627.3 214 4.01 1 FALSE 1.14E-05 2.11E-11 2.125 -250 20624 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELRSEAER [K].eLRSEAER.[L] N-Term(TMT6plex) 4 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 Q91W16; E9Q7G0; Q3UNM2; F6ZQA3 Numa1 protein OS=Mus musculus OX=10090 GN=Numa1 PE=2 SV=1; Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=2 SV=1; Nuclear mitotic apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 1 3 3 0.365 0 1 1 1 406.89355 1218.66611 1218.66398 1.75 0.00071 0/0 0 0 6420081.5 HCD 30 MS2 36.76159 373.1 110 34.1544 7436 7436 7427 QEplus033719.raw F4 429.9 362 408.8 252.6 478.9 306.2 293 2.74 1 FALSE 0.0002518 0.005113 0.499 -250 20629 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQQVEAAQR [R].dQQVEAAQR.[T] N-Term(TMT6plex) 1 Q9CQV4 Reticulophagy regulator 3 OS=Mus musculus OX=10090 GN=Retreg3 PE=1 SV=1 Q9CQV4 Reticulophagy regulator 3 OS=Mus musculus OX=10090 GN=Retreg3 PE=1 SV=1 0 2 2 0.5596 0 1 1 1 637.33966 1273.67204 1273.66979 1.77 0.00113 0/0 0 0 4475292 HCD 30 MS2 42.55336 222.5 110 34.1569 7437 7437 7427 QEplus033719.raw F4 220.5 180.9 245.9 181.9 249.2 256.6 221 3.27 1 FALSE 1.14E-05 5.98E-07 1.28 -250 20634 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HYQIHR [K].hYQIHR.[I] N-Term(TMT6plex) 3 Q99ME9 GTP-binding protein 4 OS=Mus musculus OX=10090 GN=Gtpbp4 PE=1 SV=3 Q3UR29; Q99ME9; Q3TPJ4 Nucleolar GTP-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Gtpbp4 PE=2 SV=1; GTP-binding protein 4 OS=Mus musculus OX=10090 GN=Gtpbp4 PE=1 SV=3; Nucleolar GTP-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Gtpbp4 PE=2 SV=1 0 3 3 0.3633 0 1 1 1 361.54037 1082.60657 1082.60568 0.83 0.0003 0/0 0 0 5931643 HCD 30 MS2 23.25548 179.9 110 34.1642 7439 7439 7438 QEplus033719.raw F4 246.1 122.7 186.9 137.6 184.2 202.2 125 2.89 1 FALSE 0.001787 0.03093 0.212 -250 20659 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGSISSSPSR [K].sGSISSSPSR.[R] N-Term(TMT6plex) 3 Q3U9G9 Delta(14)-sterol reductase LBR OS=Mus musculus OX=10090 GN=Lbr PE=1 SV=2 Q3U9G9; A0A0A6YW01; A0A0A6YXT6 Delta(14)-sterol reductase LBR OS=Mus musculus OX=10090 GN=Lbr PE=1 SV=2; Delta(14)-sterol reductase LBR (Fragment) OS=Mus musculus OX=10090 GN=Lbr PE=1 SV=1; Delta(14)-sterol reductase LBR (Fragment) OS=Mus musculus OX=10090 GN=Lbr PE=1 SV=1 0 2 2 0.6228 0 1 1 1 597.32062 1193.63396 1193.63235 1.35 0.00081 0/0 0 0 20512816 HCD 30 MS2 2.564603 445.7 88.676 34.1733 7443 7443 7438 QEplus033719.raw F4 376.9 606.2 512.4 247.2 578.7 352.6 253 2.81 1 FALSE 1.14E-05 1.28E-07 1.407 -250 20667 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DFSHTGR [K].dFSHTGR.[G] N-Term(TMT6plex) 6 Q921D5 DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1 Q921D5; Q9D077; P49717; Q8C1Z0; Q5DTS8; Q3UA65 DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1; DNA replication licensing factor MCM4 OS=Mus musculus OX=10090 GN=Mcm4 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1; DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1 0 3 3 0.5529 0 1 1 1 350.18448 1048.53888 1048.53732 1.49 0.00052 0/0 0 0 18145576 HCD 30 MS2 6.916201 305.5 66.608 34.1755 7444 7444 7438 QEplus033719.raw F4 356.9 315 263.8 152.4 507.6 237.2 191 3.4 1 FALSE 1.14E-05 0.0003676 0.748 -250 20684 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNANLCR [K].gNANLcR.[A] N-Term(TMT6plex); C6(Carbamidomethyl) 2 B7ZP20 Ankyrin repeat and FYVE domain containing 1 OS=Mus musculus OX=10090 GN=Ankfy1 PE=2 SV=1 B7ZP20; Q810B6 Ankyrin repeat and FYVE domain containing 1 OS=Mus musculus OX=10090 GN=Ankfy1 PE=2 SV=1; Rabankyrin-5 OS=Mus musculus OX=10090 GN=Ankfy1 PE=1 SV=2 0 2 2 0.3871 0 1 1 1 517.27423 1033.54119 1033.54103 0.15 0.00008 0/0 0 0 13355908 HCD 30 MS2 26.82859 874.3 110 34.1828 7447 7447 7438 QEplus033719.raw F4 969.1 728.4 881.8 747.4 1168.7 750.7 169 2.17 1 FALSE 0.008526 0.1506 -0.088 -250 20692 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HPVTVAR [R].hPVTVAR.[A] N-Term(TMT6plex) 15 G3XA35 Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1 Q8BS97; Q4VA91; E9QMK3; E9PYH0; Q8C9U7; Q3TNR6; G3XA35; Q62059; Q05CR7; E9QMK2; Q3TQ47; Q62059-4; Q62059-2; Q62059-3; Q3UXS4 Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Versican OS=Mus musculus OX=10090 GN=Vcan PE=2 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Vcan PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Vcan PE=2 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=2; Vcan protein (Fragment) OS=Mus musculus OX=10090 GN=Vcan PE=2 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Vcan PE=2 SV=1; Isoform V3 of Versican core protein OS=Mus musculus OX=10090 GN=Vcan; Isoform V1 of Versican core protein OS=Mus musculus OX=10090 GN=Vcan; Isoform V2 of Versican core protein OS=Mus musculus OX=10090 GN=Vcan; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Vcan PE=2 SV=1 0 2 2 0.2189 0 1 1 1 504.81165 1008.61601 1008.61518 0.83 0.00042 0/0 0 0 12501878 HCD 30 MS2 34.66972 618.9 110 34.1853 7448 7448 7438 QEplus033719.raw F4 655.2 474.8 639 617.9 715.3 611.3 59 2.01 1 FALSE 0.0009633 0.013 0.359 -250 20748 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSSDNNTNTLGR [R].sSSDNNTNTLGR.[N] N-Term(TMT6plex) 3 F8WIE5 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Hectd1 PE=1 SV=1 Q69ZR2; F8WIE5; Q3UQY6 E3 ubiquitin-protein ligase HECTD1 OS=Mus musculus OX=10090 GN=Hectd1 PE=1 SV=2; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Hectd1 PE=1 SV=1; MIB/HERC2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hectd1 PE=2 SV=1 0 2 2 0.6318 0 1 1 1 747.87073 1494.73418 1494.73458 -0.27 -0.0002 0/0 0 0 3739074.5 HCD 30 MS2 31.69749 105.9 110 34.2089 7457 7457 7449 QEplus033719.raw F4 105 78.8 106.9 90.7 126.6 127.4 105 2.77 1 FALSE 1.14E-05 2.21E-08 1.552 -250 20753 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSSASSTAER [R].vSSASSTAER.[G] N-Term(TMT6plex) 5 E9Q852 Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=2 E9Q852; E9PYX7; E9Q9C3; Q9QZQ1; Q9QZQ1-2 Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=2; Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=1; Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=1; Afadin OS=Mus musculus OX=10090 GN=Afdn PE=1 SV=3; Isoform 1 of Afadin OS=Mus musculus OX=10090 GN=Afdn 0 2 2 0.6647 0 1 1 1 612.32654 1223.6458 1223.64291 2.36 0.00144 0/0 0 0 2761520.25 HCD 30 MS2 12.96852 182 110 34.2114 7458 7458 7449 QEplus033719.raw F4 188.8 184 190.3 134.3 251.4 143.1 185 3.4 1 FALSE 1.14E-05 8.02E-07 1.256 -250 20762 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQSTGEGEAQR [K].vQSTGEGEAQR.[Y] N-Term(TMT6plex) 1 B6YY24 Skeletal muscle cells re-entry induced OS=Mus musculus OX=10090 GN=Fam91a1 PE=1 SV=1 B6YY24 Skeletal muscle cells re-entry induced OS=Mus musculus OX=10090 GN=Fam91a1 PE=1 SV=1 0 2 2 0.6293 0 1 1 1 695.86176 1390.71623 1390.71239 2.77 0.00192 0/0 0 0 3075383 HCD 30 MS2 14.65073 118.3 110 34.214 7459 7459 7449 QEplus033719.raw F4 120 106.8 127.9 95.4 143.5 116 207 3.48 1 FALSE 1.14E-05 1.01E-10 1.996 -250 20771 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DCEAEVR [KR].dcEAEVR.[A] N-Term(TMT6plex); C2(Carbamidomethyl) 11 Q76MZ3 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=3 Q7TMX2; H3BKU1; Q8C2E1; Q3TTF6; H3BIV7; H3BLE7; Q76MZ3; Q8BIX1; Q7TNP2; H3BLQ0; G3UWS4 "Protein phosphatase 2 (Formerly 2A), regulatory subunit A (PR 65), alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppp2r1a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppp2r1b PE=2 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=2; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1" 0 2 2 0.3797 0 1 1 1 554.26959 1107.53191 1107.53019 1.55 0.00086 0/0 0 0 117689264 HCD 30 MS2 3.063779 482 13.778 34.2213 7461 7461 7460 QEplus033719.raw F4 500.5 421.8 495.6 401.1 593.8 479.2 80 2.66 1 FALSE 0.00116 0.01561 0.325 -250 20801 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENSNFR [K].eNSNFR.[L] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.3738 0 1 1 1 498.25943 995.51158 995.51077 0.81 0.0004 0/0 0 0 14314312 HCD 30 MS2 14.80628 725.2 110 34.2356 7467 7467 7460 QEplus033719.raw F4 951.5 185.5 514.3 1456.6 276.4 966.7 71 2.14 2 FALSE 0.005131 0.08817 0.039 -250 20809 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YGPPSRR [R].yGPPSRR.[S] N-Term(TMT6plex) 6 H7BX95 Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1 F7AI47; Q6PDM2-2; Q6PDM2-3; H7BX95; Q6PDM2; F6QXN3 Serine/arginine-rich-splicing factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1; Isoform 2 of Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1; Isoform 3 of Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1; Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1; Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=3; Serine/arginine-rich-splicing factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1 1 3 3 0.5556 0 1 1 1 354.54034 1061.60648 1061.60534 1.07 0.00038 0/0 0 0 12223036 HCD 30 MS2 41.4245 381.3 90.843 34.2378 7468 7468 7460 QEplus033719.raw F4 397.4 379.8 467.9 250.8 432.3 359.5 355 2.43 1 FALSE 0.001101 0.01428 0.342 -250 20816 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQLTQNR [R].nQLTQNR.[G] N-Term(TMT6plex) 2 Q9R190 Metastasis-associated protein MTA2 OS=Mus musculus OX=10090 GN=Mta2 PE=1 SV=1 Q3TZP3; Q9R190 Uncharacterized protein OS=Mus musculus OX=10090 GN=Mta2 PE=2 SV=1; Metastasis-associated protein MTA2 OS=Mus musculus OX=10090 GN=Mta2 PE=1 SV=1 0 2 2 0.1883 0 1 1 1 551.81299 1102.6187 1102.61664 1.87 0.00103 0/0 0 0 10202797 HCD 30 MS2 67.20956 522 73.497 34.2401 7469 7469 7460 QEplus033719.raw F4 763.4 437.8 504.6 320.4 564.4 541.4 297 2.39 1 FALSE 0.001185 0.01618 0.319 -250 20823 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DCPGDEDRVR [R].dcPGDEDRVR.[W] N-Term(TMT6plex); C2(Carbamidomethyl) 1 Q9JIG7 Coiled-coil domain-containing protein 22 OS=Mus musculus OX=10090 GN=Ccdc22 PE=1 SV=1 Q9JIG7 Coiled-coil domain-containing protein 22 OS=Mus musculus OX=10090 GN=Ccdc22 PE=1 SV=1 1 3 3 0.4959 0 1 1 1 483.23141 1447.67969 1447.67971 -0.01 -0.00001 0/0 0 0 2928175.25 HCD 30 MS2 82.33922 267.6 110 34.2426 7470 7470 7460 QEplus033719.raw F4 356.4 143 264.4 291.1 233.5 317.3 42 2.46 1 FALSE 0.0006294 0.009658 0.41 -250 20830 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRPGPPGTAGAR [R].gRPGPPGTAGAR.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 3 3 0.5405 0 1 1 1 441.58829 1322.75031 1322.74905 0.95 0.00042 0/0 0 0 75038040 HCD 30 MS2 6.300723 193.2 14.165 34.2499 7472 7472 7471 QEplus033719.raw F4 173.7 220.8 241.9 63.7 251.2 208 455 4.2 1 FALSE 1.14E-05 6.92E-08 1.458 -250 20838 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADHGEPIGR [R].aDHGEPIGR.[G] N-Term(TMT6plex) 1 Q71LX8 Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q71LX8 Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 0 3 3 0.5976 0 1 1 1 394.21457 1180.62915 1180.6272 1.65 0.00065 0/0 0 0 59532748 HCD 30 MS2 45.34565 240.8 11.102 34.2521 7473 7473 7471 QEplus033719.raw F4 327.3 186.4 234.9 205.5 281.2 209.8 237 3.33 1 FALSE 1.14E-05 3.05E-05 0.955 -250 20844 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVYSSSR [R].nVYSSSR.[Y] N-Term(TMT6plex) 7 Q3UXS8 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf10 PE=2 SV=1 Q9R0U0-2; Q3UXS8; Q3UDH7; Q3UYX6; Q3TFP0; Q9R0U0; Q3UA07 Isoform 2 of Serine/arginine-rich splicing factor 10 OS=Mus musculus OX=10090 GN=Srsf10; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf10 PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf10 PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf10 PE=2 SV=1; Serine/arginine-rich-splicing factor 10 OS=Mus musculus OX=10090 GN=Srsf10 PE=1 SV=1; Serine/arginine-rich splicing factor 10 OS=Mus musculus OX=10090 GN=Srsf10 PE=1 SV=2; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf10 PE=2 SV=1 0 2 2 0.6017 0 1 1 1 521.28107 1041.55486 1041.55264 2.13 0.00111 0/0 0 0 29390032 HCD 30 MS2 12.05887 622.2 62.173 34.2544 7474 7474 7471 QEplus033719.raw F4 613.9 603.8 655.7 473.6 866.9 519.5 135 2.41 1 FALSE 0.0005556 0.008338 0.433 -250 20852 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQLDER [K].qQLDER.[L] N-Term(TMT6plex) 5 P13541; B2RY26 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1 P13541; G3UW82; I6L963; B2RY26; B2RXX9 "Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1" 0 2 2 0.0732 0 1 1 2 509.28085 1017.55443 1017.55264 1.76 0.0009 0/0 0 0 21591724 HCD 30 MS2 5.074022 656.1 66.223 34.2589 7476 7476 7471 QEplus033719.raw F4 902.9 148.1 469.4 1226.1 175.9 1014.1 273 2.46 2 FALSE 0.002006 0.03521 0.193 -250 20861 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANVEEER [R].aNVEEER.[A] N-Term(TMT6plex) 2 Q8K2M0 "39S ribosomal protein L38, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl38 PE=1 SV=2" Q8K2M0; Q8K2M0-2 "39S ribosomal protein L38, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl38 PE=1 SV=2; Isoform 2 of 39S ribosomal protein L38, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl38" 0 2 2 0.2599 0 1 1 1 538.2821 1075.55693 1075.55812 -1.1 -0.00059 0/0 0 0 15870804 HCD 30 MS2 38.75265 901.5 104.941 34.2613 7477 7477 7471 QEplus033719.raw F4 932.6 746 945.2 856.2 1032.8 896.1 157 2.27 1 FALSE 0.0004091 0.007364 0.451 -250 20864 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEDNLRR [K].eAEDNLRR.[E] N-Term(TMT6plex) 6 A0A498WGK2 Asparagine--tRNA ligase OS=Mus musculus OX=10090 GN=Nars PE=1 SV=1 A0A498WGK2; A0A494B996; Q8BP47; A0A494BB89; A0A494BAW6; A0A494B927 "Asparagine--tRNA ligase OS=Mus musculus OX=10090 GN=Nars PE=1 SV=1; Asparaginyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Nars PE=1 SV=1; Asparagine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=NARS1 PE=1 SV=2; Asparaginyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Nars PE=1 SV=1; Asparaginyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Nars PE=1 SV=1; Asparaginyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Nars PE=1 SV=1" 1 2 2 0.3852 0 1 1 1 616.33466 1231.66203 1231.65923 2.28 0.0014 0/0 0 0 14454789 HCD 30 MS2 14.95686 372.5 110 34.2638 7478 7478 7471 QEplus033719.raw F4 413.6 307.7 379.3 349.1 401.4 383.7 273 2.83 1 FALSE 1.14E-05 0.0002493 0.781 -250 20869 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGTCPVCR [K].sGTcPVcR.[RC] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl) 9 B1AXU4 E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus OX=10090 GN=Pja1 PE=1 SV=1 Q80U04; O55176-4; B1AXU4; Q3UXQ1; Q80U04-2; B1AXU3; O55176; O55176-2; A0JLS7 E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus OX=10090 GN=Pja2 PE=1 SV=2; Isoform 3 of E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus OX=10090 GN=Pja1; E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus OX=10090 GN=Pja1 PE=1 SV=1; RING-type domain-containing protein OS=Mus musculus OX=10090 GN=Pja1 PE=2 SV=1; Isoform 2 of E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus OX=10090 GN=Pja2; E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus OX=10090 GN=Pja1 PE=1 SV=1; E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus OX=10090 GN=Pja1 PE=1 SV=3; Isoform 2 of E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus OX=10090 GN=Pja1; Pja1 protein (Fragment) OS=Mus musculus OX=10090 GN=Pja1 PE=2 SV=1 0 2 2 0.5273 0 1 1 1 583.28674 1165.56621 1165.56553 0.58 0.00034 0/0 0 0 9879216 HCD 30 MS2 4.124207 421.1 110 34.2663 7479 7479 7471 QEplus033719.raw F4 425.6 328 466 332.9 465.8 508.5 70 2.2 1 FALSE 0.0002814 0.005705 0.485 -250 20877 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQEDDLNR [K].sQEDDLNR.[A] N-Term(TMT6plex) 5 Q60902 Epidermal growth factor receptor substrate 15-like 1 OS=Mus musculus OX=10090 GN=Eps15l1 PE=1 SV=3 Q60902-4; Q60902-3; Q60902-2; Q60902; A0A1D5RLS1 Isoform 4 of Epidermal growth factor receptor substrate 15-like 1 OS=Mus musculus OX=10090 GN=Eps15l1; Isoform 3 of Epidermal growth factor receptor substrate 15-like 1 OS=Mus musculus OX=10090 GN=Eps15l1; Isoform 2 of Epidermal growth factor receptor substrate 15-like 1 OS=Mus musculus OX=10090 GN=Eps15l1; Epidermal growth factor receptor substrate 15-like 1 OS=Mus musculus OX=10090 GN=Eps15l1 PE=1 SV=3; Epidermal growth factor receptor substrate 15-like 1 OS=Mus musculus OX=10090 GN=Eps15l1 PE=1 SV=1 0 2 2 0.5977 0 1 1 1 603.30304 1205.5988 1205.59596 2.36 0.00142 0/0 0 0 7876481.5 HCD 30 MS2 14.00712 444.5 110 34.2688 7480 7480 7471 QEplus033719.raw F4 442.8 424.4 479.7 323 556.9 440.1 111 2.66 1 FALSE 1.14E-05 0.0002884 0.769 -250 20885 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RALEAER [K].rALEAER.[YQ] N-Term(TMT6plex) 12 A0A0N4SUU0 "Pleckstrin homology domain-containing, family A member 5 (Fragment) OS=Mus musculus OX=10090 GN=Plekha5 PE=1 SV=1" A0A0N4SUU0; A0A0N4SW19; E9Q6H8; Q8CIA7; F8VQ70; Q6ZPK1; B2RXS3; A0A0N4SWD7; A0A0N4SUV0; Q69ZJ3; Q8BKW5; Q501L8 "Pleckstrin homology domain-containing, family A member 5 (Fragment) OS=Mus musculus OX=10090 GN=Plekha5 PE=1 SV=1; Pleckstrin homology domain-containing, family A member 5 OS=Mus musculus OX=10090 GN=Plekha5 PE=1 SV=1; Pleckstrin homology domain-containing, family A member 5 OS=Mus musculus OX=10090 GN=Plekha5 PE=1 SV=1; Plekha5 protein OS=Mus musculus OX=10090 GN=Plekha5 PE=2 SV=1; S phase cyclin A-associated protein in the ER OS=Mus musculus OX=10090 GN=Scaper PE=1 SV=1; MKIAA1686 protein (Fragment) OS=Mus musculus OX=10090 GN=Plekha5 PE=2 SV=1; S phase cyclin A-associated protein in the ER OS=Mus musculus OX=10090 GN=Scaper PE=1 SV=1; Pleckstrin homology domain-containing, family A member 5 (Fragment) OS=Mus musculus OX=10090 GN=Plekha5 PE=1 SV=1; Pleckstrin homology domain-containing, family A member 5 OS=Mus musculus OX=10090 GN=Plekha5 PE=1 SV=1; MKIAA1454 protein (Fragment) OS=Mus musculus OX=10090 GN=Scaper PE=2 SV=1; U1-type domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Scaper PE=2 SV=1; Scaper protein (Fragment) OS=Mus musculus OX=10090 GN=Scaper PE=2 SV=1" 1 3 3 0.1559 0 1 1 1 358.54709 1073.62671 1073.62647 0.22 0.00008 0/0 0 0 6078388.5 HCD 30 MS2 51.26991 303.2 110 34.2713 7481 7481 7471 QEplus033719.raw F4 465.5 209.5 298.9 218.8 294 332.5 264 2.95 1 FALSE 0.002173 0.04136 0.17 -250 20903 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADHGEPIGR [R].aDHGEPIGR.[G] N-Term(TMT6plex) 1 Q71LX8 Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q71LX8 Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 0 2 2 0.5227 0 1 1 1 590.81616 1180.62505 1180.6272 -1.82 -0.00108 0/0 0 0 6550988.5 HCD 30 MS2 67.1898 520.9 110 34.2811 7484 7484 7482 QEplus033719.raw F4 487.8 491.7 592.9 459.7 575.1 518.1 225 2.2 1 FALSE 0.0003312 0.006357 0.471 -250 20916 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGRHPQGEQMYR [K].dGRHPQGEQMYR.[R] N-Term(TMT6plex) 31 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q499F9; Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q05CR3; Q9QXS1-9; E9Q9J6; Q9QXS1-5; E9PW24; A0A0R4J221; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; A0A0R4J223; Q8C8S5; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.6506 0 1 1 1 568.28082 1702.82792 1702.8281 -0.11 -0.00006 0/0 0 0 12696220 HCD 30 MS2 34.06741 374.7 110 34.2859 7486 7486 7482 QEplus033719.raw F4 386.6 324.9 425.2 336.8 393.9 380.8 114 4.35 2 FALSE 1.14E-05 1.15E-05 1.036 -250 20925 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGQICSDR [K].dGQIcSDR.[G] N-Term(TMT6plex); C5(Carbamidomethyl) 5 G5E8F8 Integrin beta OS=Mus musculus OX=10090 GN=Itgb5 PE=1 SV=1 G5E8F8; A0A338P795; Q6PE70; O70309; O70309-2 Integrin beta OS=Mus musculus OX=10090 GN=Itgb5 PE=1 SV=1; Integrin beta OS=Mus musculus OX=10090 GN=Itgb5 PE=1 SV=1; Integrin beta OS=Mus musculus OX=10090 GN=Itgb5 PE=1 SV=1; Integrin beta-5 OS=Mus musculus OX=10090 GN=Itgb5 PE=1 SV=2; Isoform Beta-5B of Integrin beta-5 OS=Mus musculus OX=10090 GN=Itgb5 0 2 2 0.5277 0 1 1 1 590.28552 1179.56377 1179.56255 1.03 0.00061 0/0 0 0 9394870 HCD 30 MS2 45.23355 468.4 110 34.2884 7487 7487 7482 QEplus033719.raw F4 437.3 483 530.3 388.5 507 464.1 47 2.71 1 FALSE 1.14E-05 0.0003626 0.749 -250 20931 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEQERQEQEERER [R].mEQERQEQEERER.[R] N-Term(TMT6plex) 5 A0A0R4J1E3 Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1 F7CPL2; Q9QXS6-3; Q9QXS6; A0A0R4J1E3; Q9QXS6-2 Drebrin (Fragment) OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1; Isoform E2 of Drebrin OS=Mus musculus OX=10090 GN=Dbn1; Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=4; Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1; Isoform A2 of Drebrin OS=Mus musculus OX=10090 GN=Dbn1 2 4 4 0.5333 0 1 1 1 502.24481 2005.95742 2005.95588 0.77 0.00038 0/0 0 0 8590886 HCD 30 MS2 19.70558 347.7 110 34.2909 7488 7488 7482 QEplus033719.raw F4 394.5 275.8 409.6 258.2 416.5 331.8 103 3.75 1 FALSE 1.14E-05 1.28E-05 1.027 -250 20939 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPATLQR [R].rPATLQR.[K] N-Term(TMT6plex) 2 Q8R5A6 TBC1 domain family member 22A OS=Mus musculus OX=10090 GN=Tbc1d22a PE=1 SV=3 Q8R5A6-2; Q8R5A6 Isoform 2 of TBC1 domain family member 22A OS=Mus musculus OX=10090 GN=Tbc1d22a; TBC1 domain family member 22A OS=Mus musculus OX=10090 GN=Tbc1d22a PE=1 SV=3 0 3 3 0.4795 0 1 1 1 357.55966 1070.66443 1070.66319 1.16 0.00041 0/0 0 0 9001096 HCD 30 MS2 54.92471 221.2 110 34.2934 7489 7489 7482 QEplus033719.raw F4 252.3 171.9 243.1 201 220.4 238.3 138 3.17 1 FALSE 0.001506 0.02261 0.26 -250 20950 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QESTVATER [K].qESTVATER.[Q] N-Term(TMT6plex) 3 Q3TUQ5 Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=1 Q3TUQ5; O35691; Q9CV89 Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=1; Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=4; Pinin (Fragment) OS=Mus musculus OX=10090 GN=Pnn PE=2 SV=1 0 2 2 0.3072 0 1 1 1 625.33368 1249.66008 1249.65856 1.22 0.00076 0/0 0 0 4836901.5 HCD 30 MS2 37.23875 219.1 110 34.2984 7491 7491 7482 QEplus033719.raw F4 231.7 176.5 217.2 149.7 316.6 223.2 257 2.93 1 FALSE 1.14E-05 1.08E-06 1.231 -250 20967 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQEMDSQVR [K].rQEMDSQVR.[V] N-Term(TMT6plex) 2 Q8VD75 Huntingtin-interacting protein 1 OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=2 A0A0J9YUA3; Q8VD75 Huntingtin-interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=1; Huntingtin-interacting protein 1 OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=2 1 2 2 0.5741 0 1 1 1 689.3595 1377.71172 1377.71061 0.8 0.00055 0/0 0 0 1901482.625 HCD 30 MS2 0 42.8 110 34.3107 7495 7495 7493 QEplus033719.raw F4 42.9 30.2 53 37.6 39.4 53.8 250 2.7 1 FALSE 1.14E-05 2.83E-05 0.962 -250 20984 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGRHPQGEQMYR [K].dGRHPQGEQMYR.[R] N-Term(TMT6plex) 31 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q499F9; Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q05CR3; Q9QXS1-9; E9Q9J6; Q9QXS1-5; E9PW24; A0A0R4J221; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; A0A0R4J223; Q8C8S5; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 4 4 0.695 0 1 1 1 426.46262 1702.82863 1702.8281 0.31 0.00013 0/0 0 0 38294316 HCD 30 MS2 26.90499 159.3 31.098 34.3175 7498 7498 7493 QEplus033719.raw F4 177.7 140.5 174.9 142.1 169 151.6 116 5.41 2 FALSE 1.14E-05 1.63E-06 1.197 -250 20995 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGQDPYAR [R].sGQDPYAR.[N] N-Term(TMT6plex) 4 Q3UM52 Polypeptide N-acetylgalactosaminyltransferase (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 Q3UM52; Q6PB93-2; Q6PB93; Q3UA32 Polypeptide N-acetylgalactosaminyltransferase (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Isoform 2 of Polypeptide N-acetylgalactosaminyltransferase 2 OS=Mus musculus OX=10090 GN=Galnt2; Polypeptide N-acetylgalactosaminyltransferase 2 OS=Mus musculus OX=10090 GN=Galnt2 PE=1 SV=1; Polypeptide N-acetylgalactosaminyltransferase (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.5059 0 1 1 1 561.79108 1122.57488 1122.5741 0.69 0.00039 0/0 0 0 9151215 HCD 30 MS2 33.94289 479.7 110 34.3225 7500 7500 7493 QEplus033719.raw F4 438.5 418.3 502 421.5 623.4 474.6 160 2.55 1 FALSE 5.44E-05 0.002037 0.597 -250 21002 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAEDAGPAQTR [R].aAEDAGPAQTR.[A] N-Term(TMT6plex) 1 Q3UXJ3 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpll PE=2 SV=1 Q3UXJ3 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpll PE=2 SV=1 0 2 2 0.3819 0 1 1 1 658.34357 1315.67986 1315.68036 -0.38 -0.00025 0/0 0 0 6884436 HCD 30 MS2 10.56083 149.7 110 34.325 7501 7501 7493 QEplus033719.raw F4 152.7 154.6 155.7 108.9 184.7 141.3 131 3.43 1 FALSE 1.14E-05 1.63E-09 1.767 -250 21018 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNMALQR [K].dNmALQR.[V] N-Term(TMT6plex); M3(Oxidation) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 0 2 2 0.0663 0 1 1 1 546.78735 1092.56743 1092.56691 0.48 0.00026 0/0 0 0 4031945.75 HCD 30 MS2 29.85141 331.3 110 34.33 7503 7503 7493 QEplus033719.raw F4 350.6 224.8 380.4 289.4 319.4 423.2 162 1.66 1 FALSE 0.002056 0.03702 0.186 -250 21028 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQTGVGDQTTQNTR [R].sQTGVGDQTTQNTR.[L] N-Term(TMT6plex) 3 O35382 Exocyst complex component 4 OS=Mus musculus OX=10090 GN=Exoc4 PE=1 SV=2 O35382; Q8CEG7; Q69ZD1 Exocyst complex component 4 OS=Mus musculus OX=10090 GN=Exoc4 PE=1 SV=2; Exocyst complex component Sec8 OS=Mus musculus OX=10090 GN=Exoc4 PE=2 SV=1; Exocyst complex component Sec8 (Fragment) OS=Mus musculus OX=10090 GN=Exoc4 PE=2 SV=1 0 2 2 0.668 0 1 1 1 861.43597 1721.86467 1721.86157 1.8 0.00155 0/0 0 0 4528514 HCD 30 MS2 0 117.2 110 34.3373 7505 7505 7504 QEplus033719.raw F4 110.2 91.9 134.1 108.3 109.3 149.6 222 5.06 1 FALSE 1.14E-05 2.74E-14 2.673 -250 21037 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGNFGGSR [K].sGNFGGSR.[N] N-Term(TMT6plex) 5 O88569 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2 O88569-3; B7ZP22; O88569; A0A0N4SUM2; O88569-2 Isoform 3 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2; Heterogeneous nuclear ribonucleoproteins A2/B1 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 0 2 2 0.4204 0 1 1 1 505.76559 1010.52391 1010.52167 2.22 0.00112 0/0 0 0 3080236.75 HCD 30 MS2 44.61343 343.9 110 34.3398 7506 7506 7504 QEplus033719.raw F4 460.8 256.8 330.7 330 370.6 314.2 105 2.45 1 FALSE 0.001134 0.01499 0.333 -250 21051 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVAGEPGR [R].gVAGEPGR.[D] N-Term(TMT6plex) 8 Q7TT32; P04258 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1;SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain" Q8BKY2; Q7TT32; Q5DTG2; P04258; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 2 2 0.464 0 1 1 1 486.27737 971.54747 971.54716 0.32 0.00016 0/0 0 0 25302658 HCD 30 MS2 14.27191 587.7 55.429 34.3443 7508 7508 7504 QEplus033719.raw F4 525 582.2 643.2 434.1 608.2 733.6 91 2.5 2 TRUE 4.43E-05 0.001663 0.616 -250 21064 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYDESGSPR [K].nYDESGSPR.[R] N-Term(TMT6plex) 4 P61202 COP9 signalosome complex subunit 2 OS=Mus musculus OX=10090 GN=Cops2 PE=1 SV=1 P61202; A2AQE4; P61202-2; Q3UK65 COP9 signalosome complex subunit 2 OS=Mus musculus OX=10090 GN=Cops2 PE=1 SV=1; COP9 signalosome complex subunit 2 OS=Mus musculus OX=10090 GN=Cops2 PE=1 SV=1; Isoform 2 of COP9 signalosome complex subunit 2 OS=Mus musculus OX=10090 GN=Cops2; COP9 signalosome complex subunit 2 OS=Mus musculus OX=10090 GN=Cops2 PE=2 SV=1 0 2 2 0.3113 0 1 1 1 627.30249 1253.5977 1253.59596 1.39 0.00087 0/0 0 0 10776770 HCD 30 MS2 4.071158 490.1 110 34.3514 7511 7511 7504 QEplus033719.raw F4 542.1 405.9 533.9 410.3 550.9 497.4 60 2.12 1 FALSE 1.14E-05 0.0008578 0.676 -250 21071 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGNFGGR [KR].gGNFGGR.[SG] N-Term(TMT6plex) 13 Q3UK83; Q5FB19 Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1;Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1 B7ZWG9; Q8BG05-2; Q3TFB1; Q3UK83; Q5U3M2; P49312; Q58E39; Q6PFA7; Q3TIK8; Q5EBP8; Q5FB19; A2AL12; A2AL13 Hnrnpa1l2 protein OS=Mus musculus OX=10090 GN=Hnrnpa1l2 PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Hnrpa3 protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=2; Hnrpa3 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Hnrpa3 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein A3 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1 0 2 2 0.113 0 1 1 1 447.24106 893.47484 893.47908 -4.75 -0.00212 0/0 0 0 9694813 HCD 30 MS2 32.29424 714.7 105.189 34.3538 7512 7512 7504 QEplus033719.raw F4 845.2 621.2 866.6 538 824.7 592.2 55 1.77 2 FALSE 0.006841 0.1085 -0.016 -250 21079 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVAEQEER [R].eVAEQEER.[L] N-Term(TMT6plex) 6 J3QNT7 Epsin-2 OS=Mus musculus OX=10090 GN=Epn2 PE=1 SV=1 Q8CHU3-2; J3QNT7; F7CUV7; Q5NCM6; Q69ZS5; Q5NCM5 Isoform 2 of Epsin-2 OS=Mus musculus OX=10090 GN=Epn2; Epsin-2 OS=Mus musculus OX=10090 GN=Epn2 PE=1 SV=1; Epsin-2 (Fragment) OS=Mus musculus OX=10090 GN=Epn2 PE=1 SV=1; Epsin-2 OS=Mus musculus OX=10090 GN=Epn2 PE=1 SV=1; MKIAA1065 protein (Fragment) OS=Mus musculus OX=10090 GN=Epn2 PE=2 SV=1; Epsin-2 OS=Mus musculus OX=10090 GN=Epn2 PE=1 SV=1 0 2 2 0.4311 0 1 1 1 609.81262 1218.61797 1218.61636 1.32 0.0008 0/0 0 0 7396085.5 HCD 30 MS2 4.953019 258.6 110 34.3563 7513 7513 7504 QEplus033719.raw F4 252.1 271.3 272.4 208.4 303.9 243.6 131 3.41 1 FALSE 1.14E-05 4.47E-05 0.924 -250 21085 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAELRR [KR].eAELRR.[ML] N-Term(TMT6plex) 8 P42208 Septin-2 OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=2 G3UYQ0; Q9Z104; E9Q2W1; P42208; F7AVN4; E9Q3V6; Q05DT2; Q3U1X5 Septin-2 (Fragment) OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related OS=Mus musculus OX=10090 GN=Hmg20b PE=1 SV=1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (Fragment) OS=Mus musculus OX=10090 GN=Hmg20b PE=1 SV=1; Septin-2 OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=2; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (Fragment) OS=Mus musculus OX=10090 GN=Hmg20b PE=1 SV=1; Septin-2 OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=1; Hmg20b protein OS=Mus musculus OX=10090 GN=Hmg20b PE=1 SV=1; HMG box domain-containing protein OS=Mus musculus OX=10090 GN=Hmg20b PE=2 SV=1 1 2 2 0.0146 0 1 1 2 501.79932 1002.59136 1002.58936 1.99 0.001 0/0 0 0 6422527 HCD 30 MS2 57.93996 472.9 110 34.3588 7514 7514 7504 QEplus033719.raw F4 566 357.2 478.7 413.2 557.7 464.7 295 2.06 1 FALSE 0.006077 0.0998 0.007 -250 21110 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPTYRPR [R].nPTYRPR.[F] N-Term(TMT6plex) 5 Q9JKB3; Q68G78 Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3 PE=1 SV=2;Csda protein OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1 Q9JKB3; Q61478; Q68G78; Q9JKB3-2; Q8BPG0 Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3 PE=1 SV=2; DbpA murine homologue OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1; Csda protein OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1; Isoform 2 of Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3; CSD domain-containing protein OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1 0 3 3 0.4291 0 1 1 1 378.2189 1132.64215 1132.64246 -0.27 -0.0001 0/0 0 0 115168704 HCD 30 MS2 21.47709 256.9 8.964 34.3731 7519 7519 7515 QEplus033719.raw F4 285 162.4 283.4 251.7 268.1 290.9 272 2.82 2 FALSE 0.0002518 0.005061 0.5 -250 21130 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AATPAETCR [K].aATPAETcR.[D] N-Term(TMT6plex); C8(Carbamidomethyl) 2 Q3UZ39 Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=2 Q3UZ39-3; Q3UZ39 Isoform 3 of Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1; Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=2 0 2 2 0.6008 0 1 1 1 603.30841 1205.60954 1205.61459 -4.18 -0.00252 0/0 0 0 11446559 HCD 30 MS2 0 544.1 96.156 34.3799 7522 7522 7515 QEplus033719.raw F4 569.3 519.6 549.1 370.1 772.3 484 135 2.63 1 FALSE 0.0002323 0.004742 0.508 -250 21155 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAAANPENEDQQQR [K].gAAANPENEDQQQR.[L] N-Term(TMT6plex) 6 A0A1L1SQ51 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1 Q71LX4; Q68FD6; A0A1L1SQ51; B2RY15; E9PUM4; Q3TN69 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=3; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1 0 2 2 0.8132 0 1 1 1 878.92438 1756.84148 1756.84117 0.18 0.00015 0/0 0 0 5067307 HCD 30 MS2 0 94.4 110 34.3945 7527 7527 7526 QEplus033719.raw F4 100.6 73 92.5 84.6 130.9 84.6 103 4.71 1 FALSE 1.14E-05 4.89E-15 2.816 -250 21172 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YSSNVR [K].ySSNVR.[A] N-Term(TMT6plex) 7 Q91YE8 Synaptopodin-2 OS=Mus musculus OX=10090 GN=Synpo2 PE=1 SV=2 Q91YE8-2; B2RY03; Q91YE8; E9Q1U2; D3YVV9; A0A498WGE8; A0A0G2JDM5 Isoform 2 of Synaptopodin-2 OS=Mus musculus OX=10090 GN=Synpo2; Synaptopodin 2 OS=Mus musculus OX=10090 GN=Synpo2 PE=2 SV=1; Synaptopodin-2 OS=Mus musculus OX=10090 GN=Synpo2 PE=1 SV=2; Synaptopodin-2 OS=Mus musculus OX=10090 GN=Synpo2 PE=1 SV=1; Synaptopodin-2 OS=Mus musculus OX=10090 GN=Synpo2 PE=1 SV=1; Synaptopodin-2 OS=Mus musculus OX=10090 GN=Synpo2 PE=1 SV=1; Synaptopodin-2 (Fragment) OS=Mus musculus OX=10090 GN=Synpo2 PE=1 SV=1 0 2 2 0.5444 0 1 1 1 477.76422 954.52117 954.52061 0.58 0.00028 0/0 0 0 8907297 HCD 30 MS2 25.54091 571.6 110 34.4017 7530 7530 7526 QEplus033719.raw F4 599.4 243.2 668.1 719.5 363.1 836.3 22 1.8 1 FALSE 0.005276 0.09005 0.034 -250 21181 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KASGHPGDPESQQR [K].kASGHPGDPESQQR.[L] N-Term(TMT6plex); K1(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 1 3 3 0.7878 0 1 1 1 651.35028 1952.03629 1952.03501 0.66 0.00043 0/0 0 0 8027460.5 HCD 30 MS2 0 114.5 110 34.4043 7531 7531 7526 QEplus033719.raw F4 119.1 107.3 101.2 103.5 205.7 50.4 365 4.43 1 FALSE 1.14E-05 6.31E-16 3.032 -250 21193 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAAANPENEDQQQR [K].gAAANPENEDQQQR.[L] N-Term(TMT6plex) 6 A0A1L1SQ51 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1 Q71LX4; Q68FD6; A0A1L1SQ51; B2RY15; E9PUM4; Q3TN69 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=3; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1 0 3 3 0.756 0 1 1 1 586.28467 1756.83945 1756.84117 -0.98 -0.00057 0/0 0 0 6455381 HCD 30 MS2 19.73836 95.1 110 34.4093 7533 7533 7526 QEplus033719.raw F4 110.2 71.1 96.9 75.7 120 96.5 104 4.55 1 FALSE 1.14E-05 3.15E-08 1.522 -250 21220 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TKEPAGENGR [R].tkEPAGENGR.[R] N-Term(TMT6plex); K2(TMT6plex) 2 Q05DV1 NADPH--hemoprotein reductase OS=Mus musculus OX=10090 GN=Por PE=1 SV=1 Q05DV1; P37040 NADPH--hemoprotein reductase OS=Mus musculus OX=10090 GN=Por PE=1 SV=1; NADPH--cytochrome P450 reductase OS=Mus musculus OX=10090 GN=Por PE=1 SV=2 1 3 3 0.3058 0 1 1 1 506.28787 1516.84906 1516.84838 0.45 0.00023 0/0 0 0 2928264.75 HCD 30 MS2 68.45988 298.6 110 34.4241 7538 7538 7537 QEplus033719.raw F4 392.3 220.5 325.5 276.9 304 272.3 386 2.42 1 FALSE 4.43E-05 0.001666 0.616 -250 21229 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGTSSGAGGSITR [R].sGTSSGAGGSITR.[G] N-Term(TMT6plex) 8 Q9WU42 Nuclear receptor corepressor 2 OS=Mus musculus OX=10090 GN=Ncor2 PE=1 SV=3 Q9WU42; E9Q9V3; Q9WU42-2; D3Z2J5; E9Q701; E9PY55; F6Z4B2; F8VQL9 Nuclear receptor corepressor 2 OS=Mus musculus OX=10090 GN=Ncor2 PE=1 SV=3; Nuclear receptor corepressor 2 OS=Mus musculus OX=10090 GN=Ncor2 PE=1 SV=1; Isoform Beta of Nuclear receptor corepressor 2 OS=Mus musculus OX=10090 GN=Ncor2; Nuclear receptor corepressor 2 (Fragment) OS=Mus musculus OX=10090 GN=Ncor2 PE=1 SV=1; Nuclear receptor corepressor 2 OS=Mus musculus OX=10090 GN=Ncor2 PE=1 SV=1; Nuclear receptor corepressor 2 OS=Mus musculus OX=10090 GN=Ncor2 PE=1 SV=1; Nuclear receptor corepressor 2 (Fragment) OS=Mus musculus OX=10090 GN=Ncor2 PE=1 SV=1; Nuclear receptor corepressor 2 OS=Mus musculus OX=10090 GN=Ncor2 PE=1 SV=1 0 2 2 0.7176 0 1 1 1 683.85956 1366.71184 1366.71239 -0.4 -0.00027 0/0 0 0 6060829 HCD 30 MS2 0 107.3 110 34.4267 7539 7539 7537 QEplus033719.raw F4 113.8 111.5 111.7 74.5 136.2 96.2 217 4.25 1 FALSE 1.14E-05 3.83E-14 2.646 -250 21238 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQEHMR [K].mQEHMR.[I] N-Term(TMT6plex) 2 Q8K4Z5 Splicing factor 3A subunit 1 OS=Mus musculus OX=10090 GN=Sf3a1 PE=1 SV=1 Q3TVM1; Q8K4Z5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Sf3a1 PE=2 SV=1; Splicing factor 3A subunit 1 OS=Mus musculus OX=10090 GN=Sf3a1 PE=1 SV=1 0 3 3 0.5458 0 1 1 1 354.17944 1060.52378 1060.52294 0.79 0.00028 0/0 0 0 19356498 HCD 30 MS2 47.2483 280.8 49.526 34.4312 7541 7541 7537 QEplus033719.raw F4 253.4 284.2 348.2 209.9 331.6 257.3 44 2.95 1 FALSE 0.003109 0.06056 0.112 -250 21243 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGIAGSR [K].tGIAGSR.[E] N-Term(TMT6plex) 1 Q99L88 Beta-1-syntrophin OS=Mus musculus OX=10090 GN=Sntb1 PE=1 SV=4 Q99L88 Beta-1-syntrophin OS=Mus musculus OX=10090 GN=Sntb1 PE=1 SV=4 0 2 2 0.2207 0 1 1 1 445.76886 890.53044 890.5257 5.33 0.00237 0/0 0 0 12165705 HCD 30 MS2 45.34272 580.4 42.707 34.4334 7542 7542 7537 QEplus033719.raw F4 708.4 410.1 672.8 543.5 524.8 623.1 107 2.13 1 FALSE 0.008863 0.157 -0.095 -250 21260 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AATPAETCR [K].aATPAETcR.[D] N-Term(TMT6plex); C8(Carbamidomethyl) 2 Q3UZ39 Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=2 Q3UZ39-3; Q3UZ39 Isoform 3 of Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1; Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=2 0 2 2 0.5802 0 1 1 1 603.31219 1205.61711 1205.61459 2.09 0.00126 0/0 0 0 10310426 HCD 30 MS2 0 379.4 110 34.4382 7544 7544 7537 QEplus033719.raw F4 364.8 363.9 371.1 264.3 567.4 345 161 2.93 1 FALSE 4.43E-05 0.001564 0.622 -250 21266 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSTCQMCGER [K].sSTcQMcGER.[F] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl) 1 Q9CQ88 Tetraspanin-31 OS=Mus musculus OX=10090 GN=Tspan31 PE=1 SV=1 Q9CQ88 Tetraspanin-31 OS=Mus musculus OX=10090 GN=Tspan31 PE=1 SV=1 0 2 2 0.8802 0 1 1 1 722.81226 1444.61724 1444.61803 -0.55 -0.0004 0/0 0 0 2711736.25 HCD 30 MS2 0 159.4 110 34.4407 7545 7545 7537 QEplus033719.raw F4 142.4 143.8 167.2 114.3 236.4 152.1 7 4.09 1 FALSE 1.14E-05 8.24E-08 1.443 -250 21269 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSVYDTTNR [K].hSVYDTTNR.[T] N-Term(TMT6plex) 8 S4R1P5 Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=1 Q91ZU6-3; Q91ZU6-4; Q91ZU6-2; S4R1Y6; E9Q9X1; A0A087WSP0; Q91ZU6; S4R1P5 Isoform 3 of Dystonin OS=Mus musculus OX=10090 GN=Dst; Isoform 4 of Dystonin OS=Mus musculus OX=10090 GN=Dst; Isoform 1 of Dystonin OS=Mus musculus OX=10090 GN=Dst; Dystonin (Fragment) OS=Mus musculus OX=10090 GN=Dst PE=1 SV=2; Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=2; Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=1; Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=2; Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=1 0 2 2 0.3938 0 1 1 1 661.33997 1321.67266 1321.66979 2.16 0.00143 0/0 0 0 2499275.5 HCD 30 MS2 15.04263 112.7 110 34.4432 7546 7546 7537 QEplus033719.raw F4 127.1 96.7 110.7 109.7 115.9 116.2 169 2.59 1 FALSE 5.44E-05 0.001987 0.599 -250 21277 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VATQCTCR [K].vATQcTcR.[K] N-Term(TMT6plex); C5(Carbamidomethyl); C7(Carbamidomethyl) 3 Q91VY5 Lysine-specific demethylase 4B OS=Mus musculus OX=10090 GN=Kdm4b PE=2 SV=1 Q91VY5-2; Q91VY5; B0V2M9 Isoform 2 of Lysine-specific demethylase 4B OS=Mus musculus OX=10090 GN=Kdm4b; Lysine-specific demethylase 4B OS=Mus musculus OX=10090 GN=Kdm4b PE=2 SV=1; [Histone H3]-trimethyl-L-lysine(9) demethylase OS=Mus musculus OX=10090 GN=Kdm4b PE=1 SV=1 0 2 2 0.5692 0 1 1 1 612.80646 1224.60564 1224.60264 2.45 0.0015 0/0 0 0 1241999.375 HCD 30 MS2 34.1107 141.1 110 34.4457 7547 7547 7537 QEplus033719.raw F4 137.6 130.4 158.6 110.9 180.2 129 108 1.95 1 FALSE 0.0009259 0.0127 0.363 -250 21286 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENQESLR [K].eNQESLR.[S] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.5741 0 1 1 1 552.79559 1104.58391 1104.58467 -0.69 -0.00038 0/0 0 0 207717264 HCD 30 MS2 25.10077 605 9.318 34.4553 7550 7550 7548 QEplus033719.raw F4 693.4 339.7 667.2 601.1 551.7 776.7 216 2.7 1 FALSE 0.0008805 0.0122 0.37 -250 21311 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLESSQAR [K].qLESSQAR.[K] N-Term(TMT6plex) 4 A2AN08 E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1 A2AN08-3; A2AN08-5; F6SSP6; A2AN08 Isoform 3 of E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4; Isoform 5 of E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4; E3 ubiquitin-protein ligase UBR4 (Fragment) OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1; E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1 0 2 2 0.44 0 1 1 1 574.31696 1147.62663 1147.62687 -0.2 -0.00012 0/0 0 0 13729031 HCD 30 MS2 12.67635 554.8 110 34.4646 7554 7554 7548 QEplus033719.raw F4 548.6 451.7 547.5 508.9 659.7 612.2 305 3 1 FALSE 1.14E-05 0.0001022 0.855 -250 21331 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHSEVAQVR [K].aHSEVAQVR.[S] N-Term(TMT6plex) 2 Q9EP71 Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1 Q9EP71; A0A2I3BPY7 Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1; Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1 0 2 2 0.6656 0 1 1 1 613.34625 1225.68523 1225.68505 0.15 0.00009 0/0 0 0 1260175 HCD 30 MS2 30.69546 157.1 110 34.4721 7557 7557 7548 QEplus033719.raw F4 143.9 162.6 158.7 113.1 219.8 144.7 253 3.05 1 FALSE 1.14E-05 1.20E-06 1.223 -250 21340 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KASGHPGDPESQQR [K].kASGHPGDPESQQR.[L] N-Term(TMT6plex); K1(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 1 4 4 0.7107 0 1 1 1 488.76477 1952.03725 1952.03501 1.15 0.00056 0/0 0 0 14845180 HCD 30 MS2 13.12715 262.5 87.103 34.4743 7558 7558 7548 QEplus033719.raw F4 279.7 224.3 274.2 229.5 400.1 167 364 4.39 1 FALSE 1.14E-05 1.53E-08 1.582 -250 21346 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APPAGEDTR [K].aPPAGEDTR.[Q] N-Term(TMT6plex) 1 Q1XH17 Tripartite motif-containing protein 72 OS=Mus musculus OX=10090 GN=Trim72 PE=1 SV=1 Q1XH17 Tripartite motif-containing protein 72 OS=Mus musculus OX=10090 GN=Trim72 PE=1 SV=1 0 2 2 0.2402 0 1 1 1 571.80444 1142.60161 1142.60032 1.13 0.00065 0/0 0 0 8825547 HCD 30 MS2 41.59262 383.7 110 34.4816 7560 7560 7559 QEplus033719.raw F4 413.2 211.9 402.5 517.6 283.9 472.9 133 2.54 1 FALSE 0.000108 0.00308 0.555 -250 21351 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDQTQR [K].iDQTQR.[K] N-Term(TMT6plex) 3 Q99JX4 Eukaryotic translation initiation factor 3 subunit M OS=Mus musculus OX=10090 GN=Eif3m PE=1 SV=1 A2A702; Q99JX4; A2A701 Eukaryotic translation initiation factor 3 subunit M OS=Mus musculus OX=10090 GN=Eif3m PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit M OS=Mus musculus OX=10090 GN=Eif3m PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit M (Fragment) OS=Mus musculus OX=10090 GN=Eif3m PE=1 SV=1 0 2 2 0.1423 0 1 1 1 495.28192 989.55657 989.55772 -1.17 -0.00058 0/0 0 0 7149498.5 HCD 30 MS2 30.36511 568.6 110 34.4841 7561 7561 7559 QEplus033719.raw F4 666.3 412.3 670.5 496 560 606.8 223 2.53 1 FALSE 0.002258 0.04442 0.159 -250 21361 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLCHIR [RK].rLcHIR.[G] N-Term(TMT6plex); C3(Carbamidomethyl) 18 J3QNT6; Q8BMJ3 "Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad15 PE=3 SV=1;Eukaryotic translation initiation factor 1A, X-chromosomal OS=Mus musculus OX=10090 GN=Eif1ax PE=2 SV=3" A0A494BB95; J3QNT6; A0A1Y7VJE9; A0A1Y7VK80; Q8BMJ3; J3QQ02; Q3UC76; F6YNI8; Q4FJR7; J3QPI8; A0A1Y7VNG9; Q3UJQ5; A0A1Y7VLT7; Q3TQZ4; Q3UTA4; Q8BX20; J3QMW5; Q3UT53 "Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1a PE=1 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad15 PE=3 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad13 PE=3 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad12 PE=3 SV=1; Eukaryotic translation initiation factor 1A, X-chromosomal OS=Mus musculus OX=10090 GN=Eif1ax PE=2 SV=3; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad11 PE=1 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1a PE=2 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad19 PE=3 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1a PE=2 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad16 PE=3 SV=1; Eukaryotic translation initiation factor 1A domain-containing 18 OS=Mus musculus OX=10090 GN=Eif1ad18 PE=3 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad4 PE=2 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad4 PE=3 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad3 PE=2 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad10 PE=2 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad7 PE=2 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad17 PE=3 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad2 PE=2 SV=1" 1 3 3 0.3556 0 1 1 1 361.88565 1083.6424 1083.64068 1.58 0.00057 0/0 0 0 22665940 HCD 30 MS2 23.44843 322.6 49.47 34.4864 7562 7562 7559 QEplus033719.raw F4 594.6 216 308.7 211.4 248.1 357 121 3.15 2 FALSE 0.001185 0.01601 0.321 -250 21367 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGSESSIDR [K].tGSESSIDR.[L] N-Term(TMT6plex) 1 Q9QZE5 Coatomer subunit gamma-1 OS=Mus musculus OX=10090 GN=Copg1 PE=1 SV=1 Q9QZE5 Coatomer subunit gamma-1 OS=Mus musculus OX=10090 GN=Copg1 PE=1 SV=1 0 2 2 0.5977 0 1 1 1 590.80389 1180.60051 1180.60071 -0.17 -0.0001 0/0 0 0 13092795 HCD 30 MS2 16.35371 615.8 110 34.4889 7563 7563 7559 QEplus033719.raw F4 644.3 561.9 626.3 505.9 773.3 583.3 136 2.61 1 FALSE 1.14E-05 8.03E-06 1.065 -250 21376 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RALDDTAR [R].rALDDTAR.[E] N-Term(TMT6plex) 2 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 P14733; Q8C553 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3; IF rod domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Lmnb1 PE=2 SV=1 1 3 3 0.4028 0 1 1 1 382.88577 1146.64276 1146.64285 -0.08 -0.00003 0/0 0 0 11249570 HCD 30 MS2 20.16836 335.5 103.174 34.4938 7565 7565 7559 QEplus033719.raw F4 509.5 249.1 335.7 214.1 390.3 314.1 336 4.32 1 FALSE 1.14E-05 2.52E-06 1.161 -250 21391 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTIEER [R].qTIEER.[K] N-Term(TMT6plex) 6 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3UEK3; Q6A0B9; Q3TKF9; Q3UL99; Q3UM46 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; MKIAA0139 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 0 2 2 0.0837 0 1 1 1 502.78317 1004.55907 1004.55739 1.67 0.00084 0/0 0 0 7524335.5 HCD 30 MS2 62.94486 659.1 110 34.4988 7567 7567 7559 QEplus033719.raw F4 760.3 424.8 619.7 574.7 702.1 873.2 315 2.03 1 FALSE 0.004198 0.07683 0.07 -250 21412 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YESCTSAGR [K].yEScTSAGR.[N] N-Term(TMT6plex); C4(Carbamidomethyl) 2 P33434 72 kDa type IV collagenase OS=Mus musculus OX=10090 GN=Mmp2 PE=1 SV=1 P33434-2; P33434 Isoform 2 of 72 kDa type IV collagenase OS=Mus musculus OX=10090 GN=Mmp2; 72 kDa type IV collagenase OS=Mus musculus OX=10090 GN=Mmp2 PE=1 SV=1 0 2 2 0.6902 0 1 1 1 630.29877 1259.59026 1259.58877 1.18 0.00075 0/0 0 0 847540.3125 HCD 30 MS2 81.28085 139.5 110 34.5136 7572 7572 7570 QEplus033719.raw F4 134.8 125.4 184.2 129.2 129.9 133.8 25 2.55 1 FALSE 1.14E-05 0.000595 0.707 -250 21421 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNEDEDSPNK [K].rNEDEDSPNk.[L] N-Term(TMT6plex); K10(TMT6plex) 3 P62900 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1 P62900; Q9CY93; A0A0A6YX26 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=2 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1 1 3 3 0.7647 0 1 1 1 554.62042 1661.84671 1661.8495 -1.68 -0.00093 0/0 0 0 50515672 HCD 30 MS2 14.7827 451.9 31.968 34.5181 7574 7574 7570 QEplus033719.raw F4 776.8 259.4 510.7 360.9 326.5 477.4 175 4.42 1 FALSE 1.14E-05 7.15E-11 2.025 -250 21426 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTVQQADE [K].gTVQQADE.[-] N-Term(TMT6plex) 5 Q5EBQ6 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=1 A0A140T8T4; A0A0G2JES3; S4R1R7; Q5M9J5; Q5EBQ6 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9-ps6 PE=3 SV=1; 60S ribosomal protein L9 (Fragment) OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=1; 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9-ps1 PE=3 SV=1; 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=2 SV=1; 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=1 0 2 2 0.8029 0 1 1 1 538.77594 1076.5446 1076.54213 2.29 0.00123 0/0 0 0 32675774 HCD 30 MS2 14.46688 217.3 44.915 34.5204 7575 7575 7570 QEplus033719.raw F4 244.5 162.1 232.3 163.1 274.6 227.1 148 2.79 1 FALSE 0.0002518 0.005138 0.498 -250 21441 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHQHEEIQNVR [K].eHQHEEIQNVR.[N] N-Term(TMT6plex) 4 Q91YH5 Atlastin-3 OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1 A0A494BAX8; Q91YH5; Q91YH5-2; E9PYT3 Atlastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1; Atlastin-3 OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1; Isoform 2 of Atlastin-3 OS=Mus musculus OX=10090 GN=Atl3; Atlastin-3 OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1 0 4 4 0.6324 0 1 1 1 412.71603 1647.84231 1647.84005 1.37 0.00056 0/0 0 0 11628595 HCD 30 MS2 50.56863 248.1 70.116 34.5249 7577 7577 7570 QEplus033719.raw F4 274.1 196.7 271.8 206.7 290.9 248.6 226 4.38 1 FALSE 1.14E-05 8.22E-06 1.064 -250 21457 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELEQQR [K].eLEQQR.[E] N-Term(TMT6plex) 6 A0A0A0MQ79 Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1 A0A0A0MQ79; S4R294; S4R2E2; S4R2J9; Q3TLH4; Q3TLH4-5 Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C (Fragment) OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=2; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=3; Isoform 5 of Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c 0 2 2 0.1346 0 1 1 3 516.28857 1031.56987 1031.56829 1.53 0.00079 0/0 0 0 6826077 HCD 30 MS2 50.80412 625.1 110 34.5299 7579 7579 7570 QEplus033719.raw F4 714.9 460.1 615.3 483 811.9 665.4 312 2.08 1 FALSE 0.001615 0.02632 0.236 -250 21471 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLSEDR [K].nLSEDR.[LH] N-Term(TMT6plex) 10 Q3TN39 Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1 Q3TN39; A0A0U1RPQ7; Q60849; P10852; Q8BG79-2; Q3U144; P10852-2; A0A0U1RPK4; Q8BTJ9; Q8BG79 Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; 4F2 cell-surface antigen heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; CD98 heavy chain OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; Isoform 2 of CWF19-like protein 2 OS=Mus musculus OX=10090 GN=Cwf19l2; Aamy domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; Isoform 2 of 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2; 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; CWF19-like protein 2 OS=Mus musculus OX=10090 GN=Cwf19l2 PE=1 SV=1 0 2 2 0.3197 0 1 1 1 481.7597 962.51213 962.51044 1.76 0.00085 0/0 0 0 13689127 HCD 30 MS2 23.96254 626 110 34.5397 7582 7582 7581 QEplus033719.raw F4 793.4 465.8 619.6 593 721.5 563 174 2.44 1 FALSE 0.001744 0.02964 0.218 -250 21476 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QADHPKPSACR [R].qADHPkPSAcR.[N] N-Term(TMT6plex); K6(TMT6plex); C10(Carbamidomethyl) 1 Q4FJM2 Cyclin-dependent kinase inhibitor 1B OS=Mus musculus OX=10090 GN=Cdkn1b PE=2 SV=1 Q4FJM2 Cyclin-dependent kinase inhibitor 1B OS=Mus musculus OX=10090 GN=Cdkn1b PE=2 SV=1 0 3 3 0.5 0 1 1 1 575.64771 1724.92856 1724.92664 1.11 0.00064 0/0 0 0 2595806.5 HCD 30 MS2 18.28821 230.6 110 34.5422 7583 7583 7581 QEplus033719.raw F4 242.4 203.1 228.7 200.4 309.3 199.8 366 3.26 1 FALSE 1.14E-05 3.48E-05 0.945 -250 21483 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YNADEAR [K].yNADEAR.[S] N-Term(TMT6plex) 4 Q8BMJ3 "Eukaryotic translation initiation factor 1A, X-chromosomal OS=Mus musculus OX=10090 GN=Eif1ax PE=2 SV=3" A0A494BB95; Q8BMJ3; Q3UC76; Q4FJR7 "Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1a PE=1 SV=1; Eukaryotic translation initiation factor 1A, X-chromosomal OS=Mus musculus OX=10090 GN=Eif1ax PE=2 SV=3; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1a PE=2 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1a PE=2 SV=1" 0 2 2 0.5665 0 1 1 1 534.27063 1067.53398 1067.5319 1.95 0.00104 0/0 0 0 159398976 HCD 30 MS2 23.16731 583.4 7.935 34.5444 7584 7584 7581 QEplus033719.raw F4 572.6 536.3 627.4 467.3 694.5 602.1 93 2.63 1 FALSE 0.001134 0.01515 0.331 -250 21494 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQEEERERR [K].lQEEERERR.[D] N-Term(TMT6plex) 3 Q8BT90 40S ribosomal protein S17 (Fragment) OS=Mus musculus OX=10090 GN=Rps17 PE=2 SV=1 Q8BT90; Q5M9L7; Q3TK12 40S ribosomal protein S17 (Fragment) OS=Mus musculus OX=10090 GN=Rps17 PE=2 SV=1; 40S ribosomal protein S17 OS=Mus musculus OX=10090 GN=Rps17 PE=1 SV=1; 40S ribosomal protein S17 OS=Mus musculus OX=10090 GN=Rps17 PE=2 SV=1 2 4 4 0.5315 0 1 1 1 369.20517 1473.79885 1473.79712 1.17 0.00043 0/0 0 0 22400090 HCD 30 MS2 19.69946 261.3 50.036 34.5489 7586 7586 7581 QEplus033719.raw F4 291.6 232.4 289 178.2 348.9 227.5 341 4.44 1 FALSE 1.14E-05 7.67E-05 0.879 -250 21499 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNNLTDR [K].sNNLTDR.[I] N-Term(TMT6plex) 3 Q9WVG6 Histone-arginine methyltransferase CARM1 OS=Mus musculus OX=10090 GN=Carm1 PE=1 SV=2 Q9WVG6; Q9WVG6-2; D3YUP1 Histone-arginine methyltransferase CARM1 OS=Mus musculus OX=10090 GN=Carm1 PE=1 SV=2; Isoform 2 of Histone-arginine methyltransferase CARM1 OS=Mus musculus OX=10090 GN=Carm1; Coactivator-associated arginine methyltransferase 1 OS=Mus musculus OX=10090 GN=Carm1 PE=1 SV=1 0 2 2 0.262 0 1 1 1 524.78583 1048.56438 1048.55845 5.65 0.00296 0/0 0 0 21071098 HCD 30 MS2 12.18309 548.8 43.632 34.5512 7587 7587 7581 QEplus033719.raw F4 559.3 488.6 562.4 452.3 724.6 505.6 268 2.29 1 FALSE 0.001222 0.01652 0.315 -250 21521 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTNDSLMR [K].gTNDSLmR.[Q] N-Term(TMT6plex); M7(Oxidation) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 2 2 0.5029 0 1 1 1 569.79004 1138.5728 1138.57239 0.36 0.00021 0/0 0 0 8259227.5 HCD 30 MS2 50.4734 484.8 110 34.5586 7590 7590 7581 QEplus033719.raw F4 575.4 170.6 476.4 667 236.7 782.9 86 1.71 1 FALSE 0.002998 0.05846 0.118 -250 21546 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SFNQGR [R].sFNQGR.[I] N-Term(TMT6plex) 1 P70444 BH3-interacting domain death agonist OS=Mus musculus OX=10090 GN=Bid PE=1 SV=2 P70444 BH3-interacting domain death agonist OS=Mus musculus OX=10090 GN=Bid PE=1 SV=2 0 2 2 0.2826 0 1 1 1 469.25677 937.50627 937.50529 1.04 0.00049 0/0 0 0 33275092 HCD 30 MS2 27.53653 643.1 38.141 34.5732 7595 7595 7592 QEplus033719.raw F4 711.2 452.9 650.3 642.1 727.3 674.7 76 2.3 1 FALSE 0.00403 0.07461 0.076 -250 21556 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSTIVCHNR [K].qSTIVcHNR.[V] N-Term(TMT6plex); C6(Carbamidomethyl) 3 Q3U1J4 DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=2 Q91YC8; A0A494BAF6; Q3U1J4 DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=2 SV=1; DNA damage-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=1; DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=2 0 3 3 0.7579 0 1 1 1 448.57339 1343.70563 1343.70513 0.37 0.00017 0/0 0 0 25689832 HCD 30 MS2 57.30643 279.7 44.013 34.5755 7596 7596 7592 QEplus033719.raw F4 328.4 201.8 301.2 261.2 328.4 257.1 191 5.08 1 FALSE 1.14E-05 4.38E-07 1.305 -250 21567 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIAEEADR [K].hIAEEADR.[K] N-Term(TMT6plex) 11 Q8C7C3; Q58E70; E9Q5J9; A0A0R4J1P2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1 D3Z6I8; Q8C7C3; Q3TJ53; Q58E70; D3Z2H9; E9Q5J9; A0A0R4J1P2; P21107; Q8K0Z5; D3YVR0; E9Q7Q3 "Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin 3, related sequence 7 OS=Mus musculus OX=10090 GN=Tpm3-rs7 PE=3 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=3; Tropomyosin 3, gamma OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin alpha-3 chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1" 0 3 3 0.6349 0 1 1 1 390.54208 1169.6117 1169.61122 0.41 0.00016 0/0 0 0 17530898 HCD 30 MS2 74.32446 412.2 57.924 34.5801 7598 7598 7592 QEplus033719.raw F4 507.6 343.4 431.7 365.8 466.7 357.9 170 3.15 4 FALSE 4.43E-05 0.00171 0.613 -250 21577 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYQQEVDR [KR].rYQQEVDR.[I] N-Term(TMT6plex) 5 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 Q61768; Q3TY51; P28738; P33175; Q8CHF1 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3; Kinesin-like protein OS=Mus musculus OX=10090 PE=2 SV=1; Kinesin heavy chain isoform 5C OS=Mus musculus OX=10090 GN=Kif5c PE=1 SV=3; Kinesin heavy chain isoform 5A OS=Mus musculus OX=10090 GN=Kif5a PE=1 SV=3; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0531 PE=2 SV=1 1 3 3 0.5483 0 1 1 1 441.57227 1322.70224 1322.70143 0.62 0.00027 0/0 0 0 10312188 HCD 30 MS2 55.16388 534.3 106.842 34.5826 7599 7599 7592 QEplus033719.raw F4 596.5 378.5 593.5 486.5 491.9 659 294 3.83 1 FALSE 1.14E-05 0.0001151 0.845 -250 21584 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQDADERDSTENQHK [K].tQDADERDSTENQHk.[A] N-Term(TMT6plex); K15(TMT6plex) 5 A2AI52 Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus OX=10090 GN=Usp8 PE=1 SV=1 A2AI52; Q3UQ26; Q3TQM7; Q3UZ62; Q80U87 Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus OX=10090 GN=Usp8 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Mus musculus OX=10090 GN=Usp8 PE=2 SV=1; Rhodanese domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Usp8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Usp8 PE=2 SV=1; Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus OX=10090 GN=Usp8 PE=1 SV=2 1 4 4 0.6545 0 1 1 1 558.77783 2232.0895 2232.08929 0.09 0.00005 0/0 0 0 3701380.25 HCD 30 MS2 28.23751 209.8 110 34.5851 7600 7600 7592 QEplus033719.raw F4 230.3 171.1 217 159.9 304.8 175.8 147 3.3 1 FALSE 1.14E-05 1.77E-05 1 -250 21600 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSSFSGGDGR [R].nSSFSGGDGR.[V] N-Term(TMT6plex) 3 A0A087WPK3 Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=1 A0A087WPK3; A0A087WNU6; A6H5U5 Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=1; Leucine-rich repeat flightless-interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=1; Lrrfip1 protein OS=Mus musculus OX=10090 GN=Lrrfip1 PE=2 SV=1 0 2 2 0.7564 0 1 1 1 606.79407 1212.58086 1212.58064 0.18 0.00011 0/0 0 0 3218649.75 HCD 30 MS2 19.92066 205.3 110 34.5999 7605 7605 7603 QEplus033719.raw F4 285.9 57.3 181.4 292.6 85.9 328.7 78 3.9 1 FALSE 1.14E-05 1.16E-07 1.415 -250 21609 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPYGGGRPGR [R].sPYGGGRPGR.[V] N-Term(TMT6plex) 1 Q6ZWN5 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3 Q6ZWN5 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3 0 3 3 0.574 0 1 1 1 411.56161 1232.67029 1232.66973 0.45 0.00019 0/0 0 0 60695992 HCD 30 MS2 32.02884 402.4 14.439 34.6021 7606 7606 7603 QEplus033719.raw F4 403.2 334.8 449.4 350.2 448.8 428.2 283 3.85 1 FALSE 1.14E-05 2.83E-05 0.962 -250 21618 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALHGAQTSDEER [K].aLHGAQTSDEER.[F] N-Term(TMT6plex) 2 Q9D8T7 "SRA stem-loop-interacting RNA-binding protein, mitochondrial OS=Mus musculus OX=10090 GN=Slirp PE=1 SV=2" Q9D8T7; F8WHU8 "SRA stem-loop-interacting RNA-binding protein, mitochondrial OS=Mus musculus OX=10090 GN=Slirp PE=1 SV=2; SRA stem-loop-interacting RNA-binding protein, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Slirp PE=1 SV=1" 0 3 3 0.8459 0 1 1 1 514.92932 1542.77341 1542.77096 1.59 0.00082 0/0 0 0 47679656 HCD 30 MS2 4.243462 137.4 41.107 34.6044 7607 7607 7603 QEplus033719.raw F4 148.4 95.3 158.4 148.5 126.5 147.5 149 5.58 1 FALSE 1.14E-05 2.08E-10 1.936 -250 21630 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQEEERERR [K].lQEEERERR.[D] N-Term(TMT6plex) 3 Q8BT90 40S ribosomal protein S17 (Fragment) OS=Mus musculus OX=10090 GN=Rps17 PE=2 SV=1 Q8BT90; Q5M9L7; Q3TK12 40S ribosomal protein S17 (Fragment) OS=Mus musculus OX=10090 GN=Rps17 PE=2 SV=1; 40S ribosomal protein S17 OS=Mus musculus OX=10090 GN=Rps17 PE=1 SV=1; 40S ribosomal protein S17 OS=Mus musculus OX=10090 GN=Rps17 PE=2 SV=1 2 3 3 0.4706 0 1 1 1 491.93793 1473.79923 1473.79712 1.43 0.0007 0/0 0 0 17180832 HCD 30 MS2 40.17105 674.5 102.308 34.609 7609 7609 7603 QEplus033719.raw F4 715 633.6 629.8 446.2 1057.7 564.8 339 3.57 1 FALSE 1.14E-05 0.0001323 0.834 -250 21657 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGMATAEGNR [R].gGMATAEGNR.[A] N-Term(TMT6plex) 1 Q8VE18 Protein SMG8 OS=Mus musculus OX=10090 GN=Smg8 PE=1 SV=1 Q8VE18 Protein SMG8 OS=Mus musculus OX=10090 GN=Smg8 PE=1 SV=1 0 2 2 0.5798 0 1 1 1 596.79993 1192.59258 1192.59419 -1.35 -0.0008 0/0 0 0 5653100.5 HCD 30 MS2 6.242488 338.6 110 34.619 7613 7613 7603 QEplus033719.raw F4 435.3 242.2 345 301.6 367.8 339.9 135 2.38 1 FALSE 0.0001603 0.003603 0.539 -250 21663 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYQQEVDR [KR].rYQQEVDR.[I] N-Term(TMT6plex) 5 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 Q61768; Q3TY51; P28738; P33175; Q8CHF1 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3; Kinesin-like protein OS=Mus musculus OX=10090 PE=2 SV=1; Kinesin heavy chain isoform 5C OS=Mus musculus OX=10090 GN=Kif5c PE=1 SV=3; Kinesin heavy chain isoform 5A OS=Mus musculus OX=10090 GN=Kif5a PE=1 SV=3; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0531 PE=2 SV=1 1 2 2 0.4864 0 1 1 1 661.8562 1322.70513 1322.70143 2.8 0.00185 0/0 0 0 5346182.5 HCD 30 MS2 0 93.5 110 34.6264 7615 7615 7614 QEplus033719.raw F4 108.3 67.5 98.5 84.1 93.1 109.6 293 2.57 1 FALSE 0.001877 0.03168 0.208 -250 21672 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALHGAQTSDEER [K].aLHGAQTSDEER.[F] N-Term(TMT6plex) 2 Q9D8T7 "SRA stem-loop-interacting RNA-binding protein, mitochondrial OS=Mus musculus OX=10090 GN=Slirp PE=1 SV=2" Q9D8T7; F8WHU8 "SRA stem-loop-interacting RNA-binding protein, mitochondrial OS=Mus musculus OX=10090 GN=Slirp PE=1 SV=2; SRA stem-loop-interacting RNA-binding protein, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Slirp PE=1 SV=1" 0 2 2 0.7934 0 1 1 1 771.8902 1542.77312 1542.77096 1.4 0.00108 0/0 0 0 6700235.5 HCD 30 MS2 0 104.9 110 34.6289 7616 7616 7614 QEplus033719.raw F4 116.1 81.2 116.9 123.7 82.6 109.2 146 4.84 1 FALSE 1.14E-05 1.29E-12 2.356 -250 21678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSAEGEAR [K].vSAEGEAR.[S] N-Term(TMT6plex) 2 B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 P14873; B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=1 SV=2; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 0 2 2 0.4493 0 1 1 1 524.28552 1047.56377 1047.5632 0.54 0.00028 0/0 0 0 24615872 HCD 30 MS2 26.87797 520.4 33.267 34.6334 7618 7618 7614 QEplus033719.raw F4 542 392.5 522.6 466.4 647.3 551.6 201 2.76 1 FALSE 5.44E-05 0.002014 0.598 -250 21693 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THEAQIQEMR [K].tHEAQIQEmR.[Q] N-Term(TMT6plex); M9(Oxidation) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 3 3 0.7046 0 1 1 1 496.58759 1487.7482 1487.74739 0.54 0.00027 0/0 0 0 12238614 HCD 30 MS2 20.68935 317 110 34.6382 7620 7620 7614 QEplus033719.raw F4 331.1 262.4 356.8 236.3 381.5 334 156 4.13 1 FALSE 1.14E-05 4.18E-06 1.119 -250 21701 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRGPTPTATGPR [K].sRGPTPTATGPR.[E] N-Term(TMT6plex) 4 A2AJI0 MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1 A2AJI1; A2AJI0; A2AJI0-2; A8Y5P4 MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1; MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1; Isoform 2 of MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1; MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1 1 3 3 0.6453 0 1 1 1 476.2709 1426.79816 1426.79639 1.24 0.00059 0/0 0 0 11298125 HCD 30 MS2 32.91277 363.5 110 34.6407 7621 7621 7614 QEplus033719.raw F4 388.7 270.5 432.2 282.5 408.9 398 330 4.06 1 FALSE 1.14E-05 1.39E-08 1.59 -250 21705 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSTIVCHNR [K].qSTIVcHNR.[V] N-Term(TMT6plex); C6(Carbamidomethyl) 3 Q3U1J4 DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=2 Q91YC8; A0A494BAF6; Q3U1J4 DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=2 SV=1; DNA damage-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=1; DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=2 0 2 2 0.6808 0 1 1 1 672.35706 1343.70683 1343.70513 1.27 0.00085 0/0 0 0 7218779.5 HCD 30 MS2 0 193.7 110 34.6432 7622 7622 7614 QEplus033719.raw F4 213.8 152.7 207.5 185.4 230 173 199 3.07 1 FALSE 1.14E-05 9.56E-06 1.051 -250 21718 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DHAGVMGESNR [K].dHAGVMGESNR.[L] N-Term(TMT6plex) 5 Q8BKH0 Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1 E9Q912-3; Q8BKH0; E9Q912-2; E9Q912; A0A0G2JGC8 Isoform 3 of Rap1 GTPase-GDP dissociation stimulator 1 OS=Mus musculus OX=10090 GN=Rap1gds1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Isoform 2 of Rap1 GTPase-GDP dissociation stimulator 1 OS=Mus musculus OX=10090 GN=Rap1gds1; Rap1 GTPase-GDP dissociation stimulator 1 OS=Mus musculus OX=10090 GN=Rap1gds1 PE=2 SV=1; Rap1 GTPase-GDP dissociation stimulator 1 OS=Mus musculus OX=10090 GN=Rap1gds1 PE=1 SV=1 0 2 2 0.7464 0 1 1 1 701.34119 1401.6751 1401.67423 0.62 0.00043 0/0 0 0 2064940.375 HCD 30 MS2 25.30921 62.3 110 34.6482 7624 7624 7614 QEplus033719.raw F4 69.9 55.4 60.8 45.3 99.3 43 60 3.51 1 FALSE 1.14E-05 3.09E-08 1.524 -250 21733 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAPGPQGPR [R].gAPGPQGPR.[G] N-Term(TMT6plex) 7 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 2 2 0.1882 0 1 1 1 533.30463 1065.60198 1065.60026 1.61 0.00086 0/0 0 0 96535960 HCD 30 MS2 28.48821 475.7 12.176 34.66 7628 7628 7625 QEplus033719.raw F4 416.2 574.1 560.4 259.5 495.9 548.3 156 2.71 1 FALSE 1.14E-05 2.74E-05 0.964 -250 21749 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIAEEADR [K].hIAEEADR.[K] N-Term(TMT6plex) 11 Q8C7C3; Q58E70; E9Q5J9; A0A0R4J1P2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1 D3Z6I8; Q8C7C3; Q3TJ53; Q58E70; D3Z2H9; E9Q5J9; A0A0R4J1P2; P21107; Q8K0Z5; D3YVR0; E9Q7Q3 "Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin 3, related sequence 7 OS=Mus musculus OX=10090 GN=Tpm3-rs7 PE=3 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=3; Tropomyosin 3, gamma OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin alpha-3 chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1" 0 2 2 0.6442 0 1 1 1 585.30988 1169.61247 1169.61122 1.08 0.00063 0/0 0 0 39797568 HCD 30 MS2 7.096701 477.1 33.405 34.6668 7631 7631 7625 QEplus033719.raw F4 488.6 460.6 448.2 419.6 642.1 403.5 176 3.26 4 FALSE 1.14E-05 0.0002101 0.795 -250 21771 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DPEAAEAR [K].dPEAAEAR.[R] N-Term(TMT6plex) 4 G3XA35 Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1 E9PYH0; G3XA35; Q62059; Q62059-2 Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=2; Isoform V1 of Versican core protein OS=Mus musculus OX=10090 GN=Vcan 0 2 2 0.4474 0 1 1 1 544.28241 1087.55754 1087.55812 -0.53 -0.00029 0/0 0 0 6242815 HCD 30 MS2 39.11587 375.8 110 34.6741 7634 7634 7625 QEplus033719.raw F4 398.3 285.1 361.6 277.4 525.3 407 86 2.28 1 FALSE 2.26E-05 0.001014 0.661 -250 21778 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHSLASPR [K].eHSLASPR.[E] N-Term(TMT6plex) 2 Q8R1N0 Zinc finger protein 830 OS=Mus musculus OX=10090 GN=Znf830 PE=1 SV=1 Q8R1N0; F8QZ85 Zinc finger protein 830 OS=Mus musculus OX=10090 GN=Znf830 PE=1 SV=1; Coiled-coil domain-containing protein 16 OS=Mus musculus OX=10090 GN=Zfp830 PE=4 SV=1 0 3 3 0.4332 0 1 1 1 375.87891 1125.62217 1125.62139 0.69 0.00026 0/0 0 0 4417098 HCD 30 MS2 48.73507 236.2 110 34.6766 7635 7635 7625 QEplus033719.raw F4 304.8 180.8 247.9 176.6 248.1 259.1 156 2.77 1 FALSE 0.0005556 0.008467 0.431 -250 21783 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNLNREDAEAR [R].nNLNREDAEAR.[I] N-Term(TMT6plex) 2 Q8BHC4 Dephospho-CoA kinase domain-containing protein OS=Mus musculus OX=10090 GN=Dcakd PE=1 SV=1 Q6PDP7; Q8BHC4 Dcakd protein (Fragment) OS=Mus musculus OX=10090 GN=Dcakd PE=2 SV=1; Dephospho-CoA kinase domain-containing protein OS=Mus musculus OX=10090 GN=Dcakd PE=1 SV=1 1 3 3 0.3889 0 1 1 1 510.93289 1530.78412 1530.7822 1.26 0.00064 0/0 0 0 19119030 HCD 30 MS2 25.55706 741.6 105.963 34.6839 7637 7637 7636 QEplus033719.raw F4 784.2 692.8 846.2 647.6 777.6 701 211 3.24 1 FALSE 1.14E-05 6.03E-05 0.899 -250 21792 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHTCFNR [RK].aHTcFNR.[LI] N-Term(TMT6plex); C4(Carbamidomethyl) 31 Q641N8; P46935 HECT-type E3 ubiquitin transferase (Fragment) OS=Mus musculus OX=10090 GN=Nedd4l PE=2 SV=1;E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus OX=10090 GN=Nedd4 PE=1 SV=3 Q8K4P8; Q8BSC0; Q641N8; Q80WX3; Q8BQD5; A0A494B9L5; A0A1Y7VJ05; Q9CUN6; Q8CFI0-2; P46935; A0A494B9F0; Q9CSE3; Q3TQK9; G3X9H8; A2A5Z6; A2A5Z6-2; A0A494BAG2; Q8CFI0; A0A571BDN7; A0A494BA39; A0A494BAX0; Q8K4P8-2; A0A494BAE4; A0A494B953; E9Q4K9; Q6I6G8; A0JNZ0; Q8CFI0-3; E9PXB7; E9PYU8; Q6P066 E3 ubiquitin-protein ligase HECW1 OS=Mus musculus OX=10090 GN=Hecw1 PE=1 SV=3; HECT domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Smurf1 PE=2 SV=1; HECT-type E3 ubiquitin transferase (Fragment) OS=Mus musculus OX=10090 GN=Nedd4l PE=2 SV=1; Smurf2 protein (Fragment) OS=Mus musculus OX=10090 GN=Smurf2 PE=2 SV=1; HECT domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hecw2 PE=2 SV=1; E3 ubiquitin-protein ligase OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=1; HECT-type E3 ubiquitin transferase (Fragment) OS=Mus musculus OX=10090 GN=Hecw1 PE=1 SV=1; E3 ubiquitin-protein ligase SMURF1 OS=Mus musculus OX=10090 GN=Smurf1 PE=1 SV=2; Isoform 2 of E3 ubiquitin-protein ligase NEDD4-like OS=Mus musculus OX=10090 GN=Nedd4l; E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus OX=10090 GN=Nedd4 PE=1 SV=3; E3 ubiquitin-protein ligase OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=1; HECT domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Smurf2 PE=2 SV=1; HECT-type E3 ubiquitin transferase (Fragment) OS=Mus musculus OX=10090 GN=Nedd4l PE=2 SV=1; E3 ubiquitin-protein ligase OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=1; E3 ubiquitin-protein ligase SMURF2 OS=Mus musculus OX=10090 GN=Smurf2 PE=1 SV=1; Isoform 2 of E3 ubiquitin-protein ligase SMURF2 OS=Mus musculus OX=10090 GN=Smurf2; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=1; E3 ubiquitin-protein ligase NEDD4-like OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=2; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Nedd4 PE=1 SV=1; E3 ubiquitin-protein ligase OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=1; Isoform 2 of E3 ubiquitin-protein ligase HECW1 OS=Mus musculus OX=10090 GN=Hecw1; HECT-type E3 ubiquitin transferase (Fragment) OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=1; E3 ubiquitin-protein ligase OS=Mus musculus OX=10090 GN=Smurf1 PE=1 SV=1; E3 ubiquitin-protein ligase HECW2 OS=Mus musculus OX=10090 GN=Hecw2 PE=1 SV=1; Nedd4 protein OS=Mus musculus OX=10090 GN=Nedd4 PE=2 SV=1; Isoform 3 of E3 ubiquitin-protein ligase NEDD4-like OS=Mus musculus OX=10090 GN=Nedd4l; E3 ubiquitin-protein ligase OS=Mus musculus OX=10090 GN=Nedd4l PE=1 SV=2; E3 ubiquitin-protein ligase OS=Mus musculus OX=10090 GN=Smurf1 PE=1 SV=1; Smurf2 protein (Fragment) OS=Mus musculus OX=10090 GN=Smurf2 PE=2 SV=1 0 3 3 0.672 0 1 1 1 378.86118 1134.56897 1134.56758 1.23 0.00047 0/0 0 0 55344228 HCD 30 MS2 17.40157 203.3 18.218 34.6908 7640 7640 7636 QEplus033719.raw F4 208.2 179.3 235.8 143.3 257.3 196.1 135 3.14 2 FALSE 0.001997 0.0352 0.193 -250 21808 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFDTDR [K].rFDTDR.[S] N-Term(TMT6plex) 3 A0A0R4IZW8 Calcium-activated neutral proteinase small subunit OS=Mus musculus OX=10090 GN=Capns1 PE=1 SV=1 O88456; A0A0R4IZW8; A0A0R4J1C2 Calpain small subunit 1 OS=Mus musculus OX=10090 GN=Capns1 PE=1 SV=1; Calcium-activated neutral proteinase small subunit OS=Mus musculus OX=10090 GN=Capns1 PE=1 SV=1; Calcium-activated neutral proteinase small subunit OS=Mus musculus OX=10090 GN=Capns1 PE=1 SV=1 1 2 2 0.2372 0 1 1 1 519.78088 1038.55449 1038.55297 1.46 0.00076 0/0 0 0 22848940 HCD 30 MS2 2.052271 386.7 87.025 34.6954 7642 7642 7636 QEplus033719.raw F4 424.7 298.7 372.7 346.4 453.5 424 171 2.15 1 FALSE 0.004245 0.07821 0.066 -250 21814 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEPQNAAGAPGR [K].nEPQNAAGAPGR.[T] N-Term(TMT6plex) 3 P35278 Ras-related protein Rab-5C OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=2 P35278; Q3TCT9; Q8C266 Ras-related protein Rab-5C OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab5c PE=2 SV=1; Ras-related protein Rab-5C OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=1 0 2 2 0.6989 0 1 1 1 705.86871 1410.73015 1410.72871 1.02 0.00072 0/0 0 0 5684161 HCD 30 MS2 37.94153 205 110 34.6979 7643 7643 7636 QEplus033719.raw F4 200.4 171.7 261.8 152.3 212.1 231.9 190 3.72 1 FALSE 1.14E-05 8.18E-09 1.634 -250 21826 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDTGAGHR [K].lDTGAGHR.[R] N-Term(TMT6plex) 1 Q6PDY2 2-aminoethanethiol dioxygenase OS=Mus musculus OX=10090 GN=Ado PE=1 SV=2 Q6PDY2 2-aminoethanethiol dioxygenase OS=Mus musculus OX=10090 GN=Ado PE=1 SV=2 0 2 2 0.2535 0 1 1 1 528.2948 1055.58232 1055.57952 2.65 0.0014 0/0 0 0 3566706.25 HCD 30 MS2 10.95693 227.9 110 34.7029 7645 7645 7636 QEplus033719.raw F4 284.5 173.1 212 193.3 329 175.4 153 2.17 1 FALSE 0.0002218 0.004659 0.51 -250 21833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THEAQIQEMR [K].tHEAQIQEmR.[Q] N-Term(TMT6plex); M9(Oxidation) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 2 2 0.6227 0 1 1 1 744.37909 1487.7509 1487.74739 2.36 0.00175 0/0 0 0 2195076.5 HCD 30 MS2 0 86.7 110 34.7054 7646 7646 7636 QEplus033719.raw F4 94.5 72 88.7 56.7 106.8 101.7 183 2.73 1 FALSE 1.14E-05 6.92E-05 0.888 -250 21842 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEPQNAAGAPGR [K].nEPQNAAGAPGR.[T] N-Term(TMT6plex) 3 P35278 Ras-related protein Rab-5C OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=2 P35278; Q3TCT9; Q8C266 Ras-related protein Rab-5C OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab5c PE=2 SV=1; Ras-related protein Rab-5C OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=1 0 3 3 0.6087 0 1 1 1 470.91486 1410.73001 1410.72871 0.93 0.00044 0/0 0 0 1298128.375 HCD 30 MS2 90.76865 282.7 110 34.7127 7648 7648 7647 QEplus033719.raw F4 331.6 203.7 294.2 258.3 326 282.5 190 3.45 1 FALSE 1.14E-05 0.0001007 0.857 -250 21847 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQPAPAQPR [R].aQPAPAQPR.[V] N-Term(TMT6plex) 1 Q91YE3 Egl nine homolog 1 OS=Mus musculus OX=10090 GN=Egln1 PE=1 SV=2 Q91YE3 Egl nine homolog 1 OS=Mus musculus OX=10090 GN=Egln1 PE=1 SV=2 0 2 2 0.5095 0 1 1 1 582.83838 1164.66948 1164.66867 0.69 0.0004 0/0 0 0 3632106.75 HCD 30 MS2 49.76173 311.7 110 34.7152 7649 7649 7647 QEplus033719.raw F4 359 241.3 335.7 258.3 353.9 322.2 343 2.1 1 FALSE 0.001335 0.01847 0.295 -250 21863 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGDRYEDRYDR [R].gGGDRYEDRYDR.[R] N-Term(TMT6plex) 8 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 2 3 3 0.606 0 1 1 1 563.27319 1687.80503 1687.79858 3.82 0.00215 0/0 0 0 4312518.5 HCD 30 MS2 9.690672 210.5 110 34.7225 7652 7652 7647 QEplus033719.raw F4 188.2 189.1 260.3 187.4 197.1 240.7 79 4.34 1 FALSE 1.14E-05 3.94E-05 0.934 -250 21869 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDTCVQAR [K].eDTcVQAR.[L] N-Term(TMT6plex); C4(Carbamidomethyl) 5 A0A1L1SV84 Kinetochore protein Spc24 OS=Mus musculus OX=10090 GN=Spc24 PE=1 SV=1 Q9D083-3; A0A1L1SV84; Q9D083-2; Q9D083; Q14BA9 Isoform 3 of Kinetochore protein Spc24 OS=Mus musculus OX=10090 GN=Spc24; Kinetochore protein Spc24 OS=Mus musculus OX=10090 GN=Spc24 PE=1 SV=1; Isoform 2 of Kinetochore protein Spc24 OS=Mus musculus OX=10090 GN=Spc24; Kinetochore protein Spc24 OS=Mus musculus OX=10090 GN=Spc24 PE=1 SV=1; Kinetochore protein Spc24 OS=Mus musculus OX=10090 GN=Spc24 PE=2 SV=1 0 2 2 0.5839 0 1 1 1 604.30219 1207.59709 1207.59385 2.68 0.00162 0/0 0 0 2806191.25 HCD 30 MS2 0 145.9 110 34.725 7653 7653 7647 QEplus033719.raw F4 160.5 86.9 86.7 85.8 328.1 127.3 112 2.74 1 FALSE 1.14E-05 6.44E-05 0.894 -250 21908 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEGSEIR [K].aEGSEIR.[L] N-Term(TMT6plex) 13 P09103 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2 P09103; Q3URP6; Q3TWE3; Q3U738; Q3TT76; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; Q3UA23; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 0 2 2 0.2271 0 1 1 1 495.77533 990.54338 990.54174 1.66 0.00082 0/0 0 0 194165232 HCD 30 MS2 3.909681 570.2 7.65 34.7468 7661 7661 7658 QEplus033719.raw F4 606.7 436.8 529.9 496.9 834.4 516.3 280 2.07 1 FALSE 0.007947 0.1324 -0.063 -250 21916 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPYGGGRPGR [R].sPYGGGRPGR.[V] N-Term(TMT6plex) 1 Q6ZWN5 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3 Q6ZWN5 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3 0 2 2 0.5068 0 1 1 1 616.83972 1232.67217 1232.66973 1.97 0.00122 0/0 0 0 60380752 HCD 30 MS2 1.587361 256.2 26.27 34.7491 7662 7662 7658 QEplus033719.raw F4 253 231.3 297.1 210.2 269.8 275.9 274 2.21 1 FALSE 0.001607 0.02553 0.241 -250 21923 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSYAQHQQVR [K].tSYAQHQQVR.[Q] N-Term(TMT6plex) 5 P97351 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3 Q3UJU5; P97351; Q3U5P8; Q3UAC2; Q9D1S3 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1 0 3 3 0.6934 0 1 1 1 482.92725 1446.76719 1446.76509 1.45 0.0007 0/0 0 0 37087596 HCD 30 MS2 9.15974 252.4 35.697 34.7514 7663 7663 7658 QEplus033719.raw F4 270.4 218.8 242.9 261.7 363.2 157.4 278 5.12 1 FALSE 1.14E-05 2.63E-08 1.537 -250 21928 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QATYTTTR [R].qATYTTTR.[L] N-Term(TMT6plex) 4 Q5SX53 Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc25a11 PE=1 SV=1 Q5SX53; Q5SX46; Q9CTC7; Q5SX48 Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc25a11 PE=1 SV=1; Mitochondrial 2-oxoglutarate/malate carrier protein (Fragment) OS=Mus musculus OX=10090 GN=Slc25a11 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Slc25a11 PE=2 SV=1; Mitochondrial 2-oxoglutarate/malate carrier protein (Fragment) OS=Mus musculus OX=10090 GN=Slc25a11 PE=1 SV=1 0 2 2 0.4417 0 1 1 1 585.81946 1170.63164 1170.63162 0.02 0.00001 0/0 0 0 36490232 HCD 30 MS2 45.22089 456.7 23.241 34.7537 7664 7664 7658 QEplus033719.raw F4 465.8 363.4 443.8 499.3 524.2 443.7 183 2.4 1 FALSE 1.14E-05 0.0009161 0.67 -250 21938 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVSENSR [R].vVSENSR.[Q] N-Term(TMT6plex) 1 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 0 2 2 0.306 0 1 1 1 510.28845 1019.56963 1019.56829 1.31 0.00067 0/0 0 0 13848883 HCD 30 MS2 32.49667 828.8 110 34.7584 7666 7666 7658 QEplus033719.raw F4 920.3 655.4 898.5 779.6 934.2 784.8 305 2.32 1 FALSE 0.001541 0.02324 0.256 -250 21947 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSSEQELR [K].sSSEQELR.[I] N-Term(TMT6plex) 2 Q9JK48 Endophilin-B1 OS=Mus musculus OX=10090 GN=Sh3glb1 PE=1 SV=1 Q9JK48-3; Q9JK48 Isoform 3 of Endophilin-B1 OS=Mus musculus OX=10090 GN=Sh3glb1; Endophilin-B1 OS=Mus musculus OX=10090 GN=Sh3glb1 PE=1 SV=1 0 2 2 0.5341 0 1 1 1 582.80731 1164.60735 1164.6058 1.33 0.00078 0/0 0 0 8721127 HCD 30 MS2 39.59908 569.5 110 34.7609 7667 7667 7658 QEplus033719.raw F4 631.1 416.8 654.9 495.5 625.8 593.1 216 2.79 1 FALSE 1.14E-05 6.69E-05 0.89 -250 21960 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HITDEADR [K].hITDEADR.[K] N-Term(TMT6plex) 2 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 A0A571BEU1; Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 0 2 2 0.6549 0 1 1 1 593.30743 1185.60759 1185.60613 1.23 0.00073 0/0 0 0 6621559 HCD 30 MS2 0 305.7 110 34.7708 7670 7670 7669 QEplus033719.raw F4 332.9 305.7 266.8 215 540.8 173.3 103 2.84 1 FALSE 1.14E-05 0.0001847 0.806 -250 21981 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVAAGCR [R].aAVAAGcR.[Q] N-Term(TMT6plex); C7(Carbamidomethyl) 2 Q9CPY7 Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 PE=1 SV=3 Q9CPY7; Q9CPY7-2 Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 PE=1 SV=3; Isoform 2 of Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 0 2 2 0.4206 0 1 1 1 502.78064 1004.554 1004.55087 3.12 0.00157 0/0 0 0 74758288 HCD 30 MS2 4.344355 454.2 17.769 34.7823 7675 7675 7669 QEplus033719.raw F4 440.5 354.8 475.3 424.8 610.3 419.4 237 2.52 1 FALSE 1.14E-05 0.0004995 0.722 -250 21996 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQQVLDR [R].rQQVLDR.[Y] N-Term(TMT6plex) 12 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" Q3URW8; B9EKJ1; E9Q447; A3KGU4; B2RXX6; A3KGU9; Q3V1V5; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 1 3 3 0.1667 0 1 1 1 381.8985 1143.68094 1143.67957 1.2 0.00046 0/0 0 0 18539324 HCD 30 MS2 67.38446 342.6 39.028 34.7868 7677 7677 7669 QEplus033719.raw F4 494.3 229.2 328.7 327.3 329 347.2 274 2.82 2 FALSE 1.14E-05 0.0008518 0.676 -250 22004 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAAVVQTAR [K].rAAVVQTAR.[E] N-Term(TMT6plex) 2 Q8CGY6 Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b PE=1 SV=1 Q8CGY6; Q8CGY6-2 Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b PE=1 SV=1; Isoform 2 of Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b 1 3 3 0.5922 0 1 1 1 400.91803 1200.73954 1200.73742 1.76 0.00071 0/0 0 0 13465863 HCD 30 MS2 18.8476 300.8 110 34.7893 7678 7678 7669 QEplus033719.raw F4 343.4 126.4 329.4 358.2 153 494.3 271 4.61 1 FALSE 1.14E-05 3.33E-08 1.518 -250 22011 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAPAAGR [R].vAPAAGR.[A] N-Term(TMT6plex) 3 B9EJ37 SH3 and PX domains 2B OS=Mus musculus OX=10090 GN=Sh3pxd2b PE=2 SV=1 B9EJ37; A2AAY5; A0A5F8MPP7 SH3 and PX domains 2B OS=Mus musculus OX=10090 GN=Sh3pxd2b PE=2 SV=1; SH3 and PX domain-containing protein 2B OS=Mus musculus OX=10090 GN=Sh3pxd2b PE=1 SV=1; SH3 and PX domain-containing protein 2B OS=Mus musculus OX=10090 GN=Sh3pxd2b PE=1 SV=1 0 2 2 0.3403 0 1 1 1 435.77209 870.53691 870.53587 1.2 0.00052 0/0 0 0 9559003 HCD 30 MS2 39.42236 480.8 110 34.7918 7679 7679 7669 QEplus033719.raw F4 495.3 392.8 555.8 378.6 557.9 504.1 28 2.38 1 FALSE 0.003067 0.05981 0.115 -250 22021 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPEGIER [R].rPEGIER.[Q] N-Term(TMT6plex) 3 Q8VDP2 STING ER exit protein OS=Mus musculus OX=10090 GN=Steep1 PE=1 SV=1 Q8VDP2; Z4YLD0; Q8VDP2-2 STING ER exit protein OS=Mus musculus OX=10090 GN=Steep1 PE=1 SV=1; STING ER exit protein OS=Mus musculus OX=10090 GN=C330007P06Rik PE=1 SV=1; Isoform 2 of STING ER exit protein OS=Mus musculus OX=10090 GN=Steep1 0 3 3 0.1468 0 1 1 1 362.54681 1085.62589 1085.62647 -0.54 -0.00019 0/0 0 0 3678951.25 HCD 30 MS2 63.45502 327.3 110 34.7991 7681 7681 7680 QEplus033719.raw F4 556.4 245.1 356.5 207.2 268.8 330 155 2.52 1 FALSE 0.003015 0.05905 0.117 -250 22029 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQEEEAR [K].mQEEEAR.[K] N-Term(TMT6plex) 4 Q80U72 Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib PE=1 SV=2 Q80U72-4; Q80U72-2; Q80U72-3; Q80U72 Isoform 4 of Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib; Isoform 2 of Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib; Isoform 3 of Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib; Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib PE=1 SV=2 0 2 2 0.3094 0 1 1 1 561.27716 1121.54704 1121.54584 1.07 0.0006 0/0 0 0 10151023 HCD 30 MS2 24.72775 407.2 110 34.8016 7682 7682 7680 QEplus033719.raw F4 452.7 253 549.7 375.7 250.2 561.9 91 2.65 1 FALSE 0.0001919 0.004005 0.527 -250 22034 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGNVAGDSK [R].rGNVAGDSk.[N] N-Term(TMT6plex); K9(TMT6plex) 4 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 P10126; Q3UZQ3; Q3UA81; Q3TII3 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1 1 3 3 0.5886 0 1 1 1 454.60208 1361.79169 1361.79013 1.14 0.00052 0/0 0 0 46419872 HCD 30 MS2 40.25772 577.1 29.733 34.8038 7683 7683 7680 QEplus033719.raw F4 1823.4 214.7 361 201.1 283.5 578.7 587 3.67 1 FALSE 1.14E-05 7.41E-07 1.262 -250 22039 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASGVPER [R].aSGVPER.[L] N-Term(TMT6plex) 2 Q3UDE2 Tubulin--tyrosine ligase-like protein 12 OS=Mus musculus OX=10090 GN=Ttll12 PE=1 SV=1 Q3UDE2; F2Z423 Tubulin--tyrosine ligase-like protein 12 OS=Mus musculus OX=10090 GN=Ttll12 PE=1 SV=1; Tubulin--tyrosine ligase-like protein 12 OS=Mus musculus OX=10090 GN=Ttll12 PE=1 SV=1 0 2 2 0.3989 0 1 1 1 472.77219 944.5371 944.53626 0.88 0.00042 0/0 0 0 15146850 HCD 30 MS2 22.77938 742.8 110 34.8063 7684 7684 7680 QEplus033719.raw F4 758.3 623 802.8 631.9 842.5 798.4 147 1.88 1 FALSE 0.0007151 0.01035 0.399 -250 22045 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSYAQHQQVR [K].tSYAQHQQVR.[Q] N-Term(TMT6plex) 5 P97351 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3 Q3UJU5; P97351; Q3U5P8; Q3UAC2; Q9D1S3 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1 0 2 2 0.7442 0 1 1 1 723.88763 1446.76799 1446.76509 2 0.00145 0/0 0 0 8544649 HCD 30 MS2 2.879859 221.1 110 34.8088 7685 7685 7680 QEplus033719.raw F4 240.2 213.1 208.6 241.6 341.5 81.3 273 3.87 1 FALSE 1.14E-05 1.19E-07 1.413 -250 22051 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPSVSQSQASR [K].sPSVSQSQASR.[V] N-Term(TMT6plex) 5 Q9Z103 Activity-dependent neuroprotector homeobox protein OS=Mus musculus OX=10090 GN=Adnp PE=1 SV=2 Q9Z103; Q5RKY4; Q6ZQ47; Q5BL11; Q3UYC8 Activity-dependent neuroprotector homeobox protein OS=Mus musculus OX=10090 GN=Adnp PE=1 SV=2; Adnp protein (Fragment) OS=Mus musculus OX=10090 GN=Adnp PE=2 SV=1; MKIAA0784 protein (Fragment) OS=Mus musculus OX=10090 GN=Adnp PE=2 SV=1; Adnp protein (Fragment) OS=Mus musculus OX=10090 GN=Adnp PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Adnp PE=2 SV=1 0 2 2 0.6228 0 1 1 1 681.86346 1362.71965 1362.71747 1.6 0.00109 0/0 0 0 8540592 HCD 30 MS2 31.48905 269.9 110 34.8114 7686 7686 7680 QEplus033719.raw F4 595.4 186.6 217.6 131.7 235.5 252.7 295 2.81 1 FALSE 1.14E-05 9.25E-06 1.054 -250 22061 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPPGPESQSR [R].gPPGPESQSR.[A] N-Term(TMT6plex) 2 Q91W39 Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1 Q91W39; B7ZC24 Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1; Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1 0 2 2 0.5243 0 1 1 1 620.82892 1240.65056 1240.64833 1.8 0.00112 0/0 0 0 6932052.5 HCD 30 MS2 15.62327 241.3 110 34.8139 7687 7687 7680 QEplus033719.raw F4 228.4 215.6 266.9 156.9 297.1 282.9 187 3.09 1 FALSE 0.0003211 0.006193 0.474 -250 22071 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQAASGENGGDAR [K].vQAASGENGGDAR.[Q] N-Term(TMT6plex) 2 Q3B7Z2 Oxysterol-binding protein 1 OS=Mus musculus OX=10090 GN=Osbp PE=1 SV=3 Q3B7Z2; Q3B7Z2-2 Oxysterol-binding protein 1 OS=Mus musculus OX=10090 GN=Osbp PE=1 SV=3; Isoform 2 of Oxysterol-binding protein 1 OS=Mus musculus OX=10090 GN=Osbp 0 2 2 0.6869 0 1 1 1 730.87012 1460.73296 1460.7291 2.64 0.00193 0/0 0 0 6099154 HCD 30 MS2 12.85633 141.9 110 34.8164 7688 7688 7680 QEplus033719.raw F4 146.7 119.1 154.2 126.6 144 161.1 131 4.44 1 FALSE 1.14E-05 3.74E-13 2.458 -250 22079 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAAVVQTAR [K].rAAVVQTAR.[E] N-Term(TMT6plex) 2 Q8CGY6 Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b PE=1 SV=1 Q8CGY6; Q8CGY6-2 Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b PE=1 SV=1; Isoform 2 of Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b 1 2 2 0.5812 0 1 1 1 600.87268 1200.73808 1200.73742 0.55 0.00033 0/0 0 0 5124211.5 HCD 30 MS2 9.998086 167.9 110 34.8189 7689 7689 7680 QEplus033719.raw F4 186.5 76.8 168.6 186.4 129.7 259.6 277 2.34 1 FALSE 0.001125 0.01495 0.333 -250 22086 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQQPACR [R].vQQPAcR.[EK] N-Term(TMT6plex); C6(Carbamidomethyl) 2 P01030 SWISS-PROT:P01030 (Bos taurus) similar to Complement C4-A precursor ENSEMBL:ENSBTAP00000007350; P01030 (Bos taurus) similar to Complement C4-A precursor; SWISS-PROT:P01030 (Bos taurus) similar to Complement C4-A precursor 0 2 2 0.3704 0 1 1 1 544.29877 1087.59026 1087.58798 2.1 0.00114 0/0 0 0 3833249.5 HCD 30 MS2 20.24162 279.6 110 34.8214 7690 7690 7680 QEplus033719.raw F4 284.6 128.4 163.4 128.7 818.3 154.3 205 2.16 1 TRUE 0.00165 0.0269 0.233 -250 22093 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENQGVYR [K].eNQGVYR.[A] N-Term(TMT6plex) 1 A2ABU4 Myomesin-3 OS=Mus musculus OX=10090 GN=Myom3 PE=1 SV=1 A2ABU4 Myomesin-3 OS=Mus musculus OX=10090 GN=Myom3 PE=1 SV=1 0 2 2 0.4973 0 1 1 1 547.79279 1094.57829 1094.57919 -0.82 -0.00045 0/0 0 0 9734933 HCD 30 MS2 35.33383 335 110 34.8287 7692 7692 7691 QEplus033719.raw F4 363.2 96 262.3 646.6 146.4 495.7 218 1.85 1 FALSE 0.0002518 0.005203 0.496 -250 22097 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPAGPQGPR [R].gPAGPQGPR.[G] N-Term(TMT6plex) 3 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087; Q99LL6 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4; Col1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1 0 3 3 0.0364 0 1 1 1 355.87186 1065.60102 1065.60026 0.71 0.00025 0/0 0 0 31524976 HCD 30 MS2 6.116181 153.2 40.081 34.8334 7694 7694 7691 QEplus033719.raw F4 193.5 108.3 152.6 134.5 169 161.1 144 3.3 1 FALSE 0.001108 0.01444 0.34 -250 22113 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEHLCTQR [K].eEHLcTQR.[M] N-Term(TMT6plex); C5(Carbamidomethyl) 5 Q58E70; E9Q5J9 Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1 Q3TJ53; Q58E70; D3Z2H9; E9Q5J9; Q8K0Z5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin 3, related sequence 7 OS=Mus musculus OX=10090 GN=Tpm3-rs7 PE=3 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 3, gamma OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1" 0 3 3 0.4932 0 1 1 1 434.55408 1301.64768 1301.64695 0.56 0.00024 0/0 0 0 24814970 HCD 30 MS2 26.39607 386.6 62.04 34.838 7696 7696 7691 QEplus033719.raw F4 445.2 347.5 388.5 287.1 500.2 351 100 3.65 2 FALSE 1.14E-05 0.0004347 0.734 -250 22122 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRAEDDMK [K].rRAEDDMk.[K] N-Term(TMT6plex); K8(TMT6plex) 35 Z4YKH8 "Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1" Q9QZ47-11; Z4YKH8; A0A0R4J1B0; A0A0R4J1B1; Z4YKF8; Z4YKG8; A0A0R4J1A8; Q8R563; Q9QZ47-4; Q9QZ47; Z4YJU0; Q9QZ47-8; F6RL36; A2A6I8; A2A6J0; A2A6I0; A2A6H6; Q9QZ47-13; A2A6I3; Z4YKD9; Q9QZ47-14; Q9QZ47-3; Q9QZ47-5; Q9QZ47-10; Z4YNB2; Q9QZ47-2; Z4YKG3; Q9QZ47-7; J3QP61; Z4YKE7; A2A6J1; Q9QZ47-12; Q9QZ47-9; A2A6I5; Q9QZ47-6 "Isoform B3e16 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnnt3 PE=2 SV=1; Isoform A4e17 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=3; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Isoform B2e17 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Troponin T, fast skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Isoform B4e16 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Isoform 14 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Isoform A3e17 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Isoform A5e17 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Isoform B3e17 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Isoform A2e17 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Isoform B1e16 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Isoform B4e17 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Isoform B2e16 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Isoform A6e17 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3" 2 4 4 0.382 0 1 1 1 370.45956 1478.81643 1478.81497 0.99 0.00036 0/0 0 0 12039062 HCD 30 MS2 10.90233 414.1 96.416 34.8425 7698 7698 7691 QEplus033719.raw F4 782.4 83 349.6 675.3 116.9 477.6 454 3.22 1 FALSE 0.0002719 0.005408 0.492 -250 22132 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQQVLDR [R].rQQVLDR.[Y] N-Term(TMT6plex) 12 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" Q3URW8; B9EKJ1; E9Q447; A3KGU4; B2RXX6; A3KGU9; Q3V1V5; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 1 2 2 0.346 0 1 1 1 572.34406 1143.68083 1143.67957 1.1 0.00063 0/0 0 0 8781027 HCD 30 MS2 26.09854 220.1 110 34.8474 7700 7700 7691 QEplus033719.raw F4 215.8 188.5 239.5 184.7 247.9 244.1 274 2.37 2 FALSE 0.001213 0.01641 0.316 -250 22142 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QNPATQNAPR [K].qNPATQNAPR.[L] N-Term(TMT6plex) 14 A0A4Y5WWJ7 Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1 E9Q405; Q9JMH9-6; A0A1C7ZN10; E9QAX2; Q9JMH9-5; Q9JMH9-4; Q9JMH9-1; B2RRE2; A0A4Y5WWJ7; Q9JMH9-2; K3W4L0; Q9JMH9-7; Q9JMH9; E9QA74 Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 6 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 5 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Isoform 4 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Isoform 1 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Myo18a protein OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1; Isoform 2 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 7 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=2; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1 0 2 2 0.7308 0 1 1 1 663.36072 1325.71416 1325.71233 1.38 0.00092 0/0 0 0 7644954 HCD 30 MS2 7.864166 186.6 110 34.85 7701 7701 7691 QEplus033719.raw F4 205.5 98 206.9 192.4 137.9 278.9 266 3.38 1 FALSE 1.14E-05 1.20E-07 1.412 -250 22171 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAPSSEER [K].vAPSSEER.[N] N-Term(TMT6plex) 2 Q9R0X4 "Acyl-coenzyme A thioesterase 9, mitochondrial OS=Mus musculus OX=10090 GN=Acot9 PE=1 SV=1" Q32MW3; Q9R0X4 "Acyl-coenzyme A thioesterase 10, mitochondrial OS=Mus musculus OX=10090 GN=Acot10 PE=2 SV=1; Acyl-coenzyme A thioesterase 9, mitochondrial OS=Mus musculus OX=10090 GN=Acot9 PE=1 SV=1" 0 2 2 0.4188 0 1 1 1 552.29895 1103.59062 1103.58942 1.09 0.0006 0/0 0 0 27205846 HCD 30 MS2 37.20962 618.5 41.223 34.8688 7708 7708 7702 QEplus033719.raw F4 641.2 524.2 649.3 610.9 623.2 662 231 3.2 1 FALSE 1.14E-05 5.82E-05 0.902 -250 22178 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHTPTHPGTLNQR [R].gHTPTHPGTLNQR.[Q] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 3 3 0.7005 0 1 1 1 548.96442 1644.8787 1644.87677 1.17 0.00064 0/0 0 0 18478484 HCD 30 MS2 3.743808 220.8 109.875 34.8713 7709 7709 7702 QEplus033719.raw F4 227.6 162.2 255.9 280.8 167.5 230.6 288 5.91 2 FALSE 1.14E-05 1.57E-10 1.96 -250 22187 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGVSSR [KR].vGVSSR.[IR] N-Term(TMT6plex) 8 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; Q3UGC3; E9QA15; Q3TNM4; E9Q0M9; D3Z6I7; S4R1T7; E9QA16 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 0 2 2 0.2489 0 1 1 1 417.25565 833.50401 833.50423 -0.26 -0.00011 0/0 0 0 17432598 HCD 30 MS2 62.54021 777.6 36.127 34.8758 7711 7711 7702 QEplus033719.raw F4 976.1 563.8 765.1 607.4 1181.1 572.4 53 2.21 1 FALSE 0.005789 0.09694 0.015 -250 22205 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEEEEER [R].vEEEEER.[NC] N-Term(TMT6plex) 9 Q5SV64; Q8VDD5 Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q80T68; A2VCK0; Q5SV64; Q3UH59; Q8VDD5; A0A2R8VKI5; Q8BLI1; Q4KMN4; Q61879 MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-9 (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 0 2 2 0.1941 0 1 1 1 574.78613 1148.56499 1148.56326 1.5 0.00086 0/0 0 0 25777192 HCD 30 MS2 6.654375 685.2 78.29 34.8899 7716 7716 7713 QEplus033719.raw F4 744.1 637.1 694 526.7 952.9 556.2 109 3.04 2 FALSE 0.0002719 0.00544 0.491 -250 22220 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQAGANTRPCPS [R].aQAGANTRPcPS.[-] N-Term(TMT6plex); C10(Carbamidomethyl) 5 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; E9PZ16; Q52KG8; Q5RKM8; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Hspg2 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Hspg2 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.8333 0 1 1 1 729.87061 1458.73393 1458.73208 1.27 0.00093 0/0 0 0 14901829 HCD 30 MS2 0 248.4 110 34.8948 7718 7718 7713 QEplus033719.raw F4 216 280.5 348.2 238.5 159.9 247.1 158 3.72 2 FALSE 1.14E-05 1.07E-07 1.422 -250 22226 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEHLCTQR [K].eEHLcTQR.[M] N-Term(TMT6plex); C5(Carbamidomethyl) 5 Q58E70; E9Q5J9 Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1 Q3TJ53; Q58E70; D3Z2H9; E9Q5J9; Q8K0Z5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin 3, related sequence 7 OS=Mus musculus OX=10090 GN=Tpm3-rs7 PE=3 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 3, gamma OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1" 0 2 2 0.416 0 1 1 1 651.32751 1301.64775 1301.64695 0.62 0.0004 0/0 0 0 14162546 HCD 30 MS2 3.59075 395 110 34.8973 7719 7719 7713 QEplus033719.raw F4 409.3 417.6 393.5 238.7 605.8 305.1 100 2.62 2 FALSE 0.0003496 0.006867 0.461 -250 22243 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TREFEDRDR [R].tREFEDRDR.[S] N-Term(TMT6plex) 4 Q08024; Q08024-2 Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb PE=1 SV=1;Isoform 2 of Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb Q3UYR3; Q08024; Q08024-4; Q08024-2 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cbfb PE=2 SV=1; Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb PE=1 SV=1; Isoform 4 of Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb; Isoform 2 of Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb 2 4 4 0.2054 0 1 1 1 363.94052 1452.74026 1452.73927 0.68 0.00025 0/0 0 0 6038146 HCD 30 MS2 46.76507 301.4 110 34.9048 7722 7722 7713 QEplus033719.raw F4 378.1 249.6 336.5 235.9 288.1 320.3 173 3.31 2 FALSE 0.0002419 0.004922 0.503 -250 22251 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSQEDLQDR [K].nSQEDLQDR.[H] N-Term(TMT6plex) 4 A2AEC2 Transcription elongation factor A protein-like 3 (Fragment) OS=Mus musculus OX=10090 GN=Tceal3 PE=1 SV=1 A2AEC2; Q8CCT4; Q8R0A5; Q9DB24 Transcription elongation factor A protein-like 3 (Fragment) OS=Mus musculus OX=10090 GN=Tceal3 PE=1 SV=1; Transcription elongation factor A protein-like 5 OS=Mus musculus OX=10090 GN=Tceal5 PE=1 SV=1; Transcription elongation factor A protein-like 3 OS=Mus musculus OX=10090 GN=Tceal3 PE=1 SV=2; Transcription elongation factor A (SII)-like 6 OS=Mus musculus OX=10090 GN=Tceal6 PE=1 SV=1 0 2 2 0.519 0 1 1 1 667.33173 1333.65618 1333.65454 1.23 0.00082 0/0 0 0 5026345 HCD 30 MS2 8.922759 176.2 110 34.9074 7723 7723 7713 QEplus033719.raw F4 244.9 26 149.6 317.7 40.7 278.2 94 3.43 1 FALSE 1.14E-05 8.19E-07 1.254 -250 22285 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVQTDHNAVQR [K].tVQTDHNAVQR.[H] N-Term(TMT6plex) 4 P22892 AP-1 complex subunit gamma-1 OS=Mus musculus OX=10090 GN=Ap1g1 PE=1 SV=3 Q8CC03; Q8CBB7; Q3UKX8; P22892 GAE domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ap1g1 PE=2 SV=1; AP-1 complex subunit gamma OS=Mus musculus OX=10090 GN=Ap1g1 PE=1 SV=1; AP-1 complex subunit gamma OS=Mus musculus OX=10090 GN=Ap1g1 PE=2 SV=1; AP-1 complex subunit gamma-1 OS=Mus musculus OX=10090 GN=Ap1g1 PE=1 SV=3 0 3 3 0.7071 0 1 1 1 499.9375 1497.79795 1497.79712 0.55 0.00028 0/0 0 0 17225860 HCD 30 MS2 19.97006 366.2 110 34.9242 7729 7729 7724 QEplus033719.raw F4 413.7 330.7 366.1 284.7 449.9 352.2 286 5.53 1 FALSE 1.14E-05 4.59E-09 1.681 -250 22291 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPNVCGSR [KR].gPNVcGSR.[YF] N-Term(TMT6plex); C5(Carbamidomethyl) 4 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q60784; Q61555 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Fibrillin-1 (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-2 OS=Mus musculus OX=10090 GN=Fbn2 PE=1 SV=2 0 2 2 0.4489 0 1 1 1 538.27911 1075.55095 1075.55159 -0.6 -0.00032 0/0 0 0 16631527 HCD 30 MS2 15.56203 678.2 63.871 34.9264 7730 7730 7724 QEplus033719.raw F4 701.2 464.4 740 838.1 541.6 783.9 149 1.76 1 FALSE 0.00198 0.03444 0.196 -250 22329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMQPTHPIR [K].emQPTHPIR.[L] N-Term(TMT6plex); M2(Oxidation) 6 P68254; Q9CQV8; P63101 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq PE=1 SV=1;14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3;14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 P68254; Q9CQV8-2; Q9CQV8; Q3UA58; P68254-2; P63101 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq PE=1 SV=1; Isoform Short of 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab; 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3; 14_3_3 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=2 SV=1; Isoform 2 of 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq; 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 0 2 2 0.6269 0 1 1 1 677.36316 1353.71904 1353.71464 3.25 0.0022 0/0 0 0 4446469 HCD 30 MS2 0 95.7 110 34.9435 7736 7736 7735 QEplus033719.raw F4 105.4 85.2 109.5 67.9 114.2 92 240 2.6 3 FALSE 0.0007056 0.01019 0.401 -250 22332 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRDPQLCR [R].sRDPQLcR.[H] N-Term(TMT6plex); C7(Carbamidomethyl) 4 Q3UE06 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nploc4 PE=2 SV=1 P60670-2; Q3UE06; P60670; Q3UDU9 Isoform 2 of Nuclear protein localization protein 4 homolog OS=Mus musculus OX=10090 GN=Nploc4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nploc4 PE=2 SV=1; Nuclear protein localization protein 4 homolog OS=Mus musculus OX=10090 GN=Nploc4 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nploc4 PE=2 SV=1 1 2 2 0.4737 0 1 1 1 630.83862 1260.66997 1260.66802 1.55 0.00097 0/0 0 0 2976256.75 HCD 30 MS2 55.07653 112.7 110 34.946 7737 7737 7735 QEplus033719.raw F4 204.9 54.6 81.1 107.5 153.3 74.9 253 1.9 1 FALSE 0.003058 0.05968 0.115 -250 22349 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHGAVAVER [K].eHGAVAVER.[V] N-Term(TMT6plex) 4 Q3UVN5 NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1 Q9CZ44-2; Q3UVN5; Q9CZ44; A2AT02 Isoform 2 of NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=1 SV=1; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=1 SV=1 0 3 3 0.6156 0 1 1 1 399.55795 1196.65931 1196.6585 0.67 0.00027 0/0 0 0 72820976 HCD 30 MS2 13.23298 181.9 17.917 34.9527 7740 7740 7735 QEplus033719.raw F4 175.6 166.6 206.5 149.2 213.8 179.6 261 4.5 1 FALSE 1.14E-05 1.21E-07 1.411 -250 22372 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEAEASRQ [K].vEAEASRQ.[-] N-Term(TMT6plex) 4 Q3TBL2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nab2 PE=2 SV=1 Q8BSC5; Q3TBL2; Q61127; Q3TYF1 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nab2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nab2 PE=2 SV=1; NGFI-A-binding protein 2 OS=Mus musculus OX=10090 GN=Nab2 PE=1 SV=2; NGFI-A-binding protein 2 OS=Mus musculus OX=10090 GN=Nab2 PE=1 SV=1 1 2 2 0.2991 0 1 1 1 559.80438 1118.60149 1118.60032 1.05 0.00059 0/0 0 0 8908960 HCD 30 MS2 55.56795 459.3 110 34.9597 7743 7743 7735 QEplus033719.raw F4 526.5 428.5 472.4 339.5 603 386 277 2.24 1 FALSE 0.005048 0.08722 0.042 -250 22389 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGNIGDGGGAADR [R].gGNIGDGGGAADR.[V] N-Term(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 0 2 2 0.6746 0 1 1 1 673.33752 1345.66777 1345.66577 1.49 0.001 0/0 0 0 6548159 HCD 30 MS2 0 194.8 110 34.9648 7745 7745 7735 QEplus033719.raw F4 201 151.8 215 188 185.1 228 118 4.64 1 FALSE 1.14E-05 4.05E-14 2.641 -250 22409 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHTPTHPGTLNQR [R].gHTPTHPGTLNQR.[Q] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 4 4 0.6078 0 1 1 1 411.97516 1644.8788 1644.87677 1.24 0.00051 0/0 0 0 82260944 HCD 30 MS2 27.29862 190.6 16.842 34.9768 7749 7749 7746 QEplus033719.raw F4 212.3 160.2 238.3 179 166.8 187.2 288 5.61 2 FALSE 1.14E-05 4.19E-06 1.119 -250 22416 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMQPTHPIR [K].emQPTHPIR.[L] N-Term(TMT6plex); M2(Oxidation) 6 P68254; Q9CQV8; P63101 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq PE=1 SV=1;14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3;14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 P68254; Q9CQV8-2; Q9CQV8; Q3UA58; P68254-2; P63101 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq PE=1 SV=1; Isoform Short of 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab; 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3; 14_3_3 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=2 SV=1; Isoform 2 of 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq; 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 0 3 3 0.6708 0 1 1 1 451.90967 1353.71445 1353.71464 -0.14 -0.00006 0/0 0 0 43748828 HCD 30 MS2 18.6147 234.6 30.209 34.9791 7750 7750 7746 QEplus033719.raw F4 251.8 201.9 255 177.7 317.2 203.8 243 4.07 3 FALSE 1.14E-05 0.0008968 0.672 -250 22420 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHGAVAVER [K].eHGAVAVER.[V] N-Term(TMT6plex) 4 Q3UVN5 NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1 Q9CZ44-2; Q3UVN5; Q9CZ44; A2AT02 Isoform 2 of NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=1 SV=1; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=1 SV=1 0 2 2 0.5063 0 1 1 1 598.83337 1196.65947 1196.6585 0.81 0.00049 0/0 0 0 12863270 HCD 30 MS2 10.11141 396.2 110 34.9816 7751 7751 7746 QEplus033719.raw F4 399.3 350.2 437.3 329.4 417.7 443.5 261 3.18 1 FALSE 1.14E-05 1.92E-06 1.184 -250 22435 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLGEDSQR [K].gLGEDSQR.[S] N-Term(TMT6plex) 7 Q3TBQ3 Alpha-mann_mid domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Man2c1 PE=2 SV=1 Q3TBQ3; A0A1S6GWG9; Q91W89; F8WIE1; Q8BWY6; E9PYM7; Q3TAW2 Alpha-mann_mid domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Man2c1 PE=2 SV=1; Alpha-mannosidase OS=Mus musculus OX=10090 GN=Man2c1 PE=2 SV=1; Alpha-mannosidase 2C1 OS=Mus musculus OX=10090 GN=Man2c1 PE=1 SV=1; Alpha-mannosidase OS=Mus musculus OX=10090 GN=Man2c1 PE=1 SV=1; Alpha-mannosidase OS=Mus musculus OX=10090 GN=Man2c1 PE=2 SV=1; Alpha-mannosidase 2C1 (Fragment) OS=Mus musculus OX=10090 GN=Man2c1 PE=1 SV=1; Glyco_hydro_38N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Man2c1 PE=2 SV=1 0 2 2 0.5103 0 1 1 1 545.79028 1090.57329 1090.56902 3.92 0.00214 0/0 0 0 6913586.5 HCD 30 MS2 18.27884 537.5 110 34.9891 7754 7754 7746 QEplus033719.raw F4 527.3 440.4 599 461.4 652.6 544.3 187 2.43 1 FALSE 1.14E-05 0.0001631 0.816 -250 22442 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RHLLTQR [K].rHLLTQR.[A] N-Term(TMT6plex) 3 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 Q99PV0; Q3UNG1; B7ZC27 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Prpf8 PE=2 SV=1; Pre-mRNA-processing-splicing factor 8 (Fragment) OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=1 1 3 3 0.3529 0 1 1 1 384.91089 1152.71811 1152.71629 1.58 0.00061 0/0 0 0 6609712.5 HCD 30 MS2 70.76651 213.4 110 34.9916 7755 7755 7746 QEplus033719.raw F4 249 165.6 234.5 174.1 228 229.4 39 3.06 1 FALSE 1.14E-05 0.0001139 0.846 -250 22451 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYEEEER [K].eYEEEER.[K] N-Term(TMT6plex) 2 Q61081 Hsp90 co-chaperone Cdc37 OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1 Q61081; A0A1L1STC0 Hsp90 co-chaperone Cdc37 OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1; Hsp90 co-chaperone Cdc37 (Fragment) OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1 0 2 2 0.6141 0 1 1 1 606.78351 1212.55974 1212.55818 1.29 0.00078 0/0 0 0 5980867.5 HCD 30 MS2 0 387.2 110 34.9941 7756 7756 7746 QEplus033719.raw F4 383.6 356.7 430.8 313.5 466.5 372.3 37 2.98 1 FALSE 0.0003408 0.006405 0.47 -250 22480 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQLQTTR [R].qQLQTTR.[Q] N-Term(TMT6plex) 3 Q99KP6 Pre-mRNA-processing factor 19 OS=Mus musculus OX=10090 GN=Prpf19 PE=1 SV=1 Q99KP6; Q99KP6-2; Q99KP6-3 Pre-mRNA-processing factor 19 OS=Mus musculus OX=10090 GN=Prpf19 PE=1 SV=1; Isoform 2 of Pre-mRNA-processing factor 19 OS=Mus musculus OX=10090 GN=Prpf19; Isoform 3 of Pre-mRNA-processing factor 19 OS=Mus musculus OX=10090 GN=Prpf19 0 2 2 0.485 0 1 1 1 552.32257 1103.63786 1103.63704 0.75 0.00041 0/0 0 0 89585960 HCD 30 MS2 51.63911 442.9 10.016 35.0084 7761 7761 7757 QEplus033719.raw F4 460.1 368.3 457.7 413.3 478.9 479.3 318 2 1 FALSE 0.001607 0.02533 0.242 -250 22490 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAHDAFR [R].eAHDAFR.[S] N-Term(TMT6plex) 12 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; Q3TYI8; B2RXX6; Q6PA04; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5; Q58ES7 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1" 0 3 3 0.5263 0 1 1 1 358.85623 1074.55414 1074.55297 1.09 0.00039 0/0 0 0 68631416 HCD 30 MS2 54.68935 231.7 10.305 35.0107 7762 7762 7757 QEplus033719.raw F4 313.9 167.3 243.4 195.4 222.1 248.2 127 2.47 2 FALSE 0.00116 0.01548 0.327 -250 22504 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQEDQLSR [R].sQEDQLSR.[R] N-Term(TMT6plex) 1 Q921W0 Charged multivesicular body protein 1a OS=Mus musculus OX=10090 GN=Chmp1a PE=1 SV=1 Q921W0 Charged multivesicular body protein 1a OS=Mus musculus OX=10090 GN=Chmp1a PE=1 SV=1 0 2 2 0.4565 0 1 1 1 596.31177 1191.61626 1191.6167 -0.37 -0.00022 0/0 0 0 5583313.5 HCD 30 MS2 0 344.1 110 35.0154 7764 7764 7757 QEplus033719.raw F4 360 279.9 379.9 288.5 384.6 371.5 176 2.76 1 FALSE 1.14E-05 0.000241 0.784 -250 22517 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MSEEAER [R].mSEEAER.[Q] N-Term(TMT6plex) 2 Q3TVY3 Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1 Q3TVY3; Q8BR63 Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Protein FAM177A1 OS=Mus musculus OX=10090 GN=Fam177a1 PE=1 SV=1 0 2 2 0.0952 0 1 1 1 540.76306 1080.51885 1080.51929 -0.41 -0.00022 0/0 0 0 3406944.75 HCD 30 MS2 66.27372 415.5 110 35.0205 7766 7766 7757 QEplus033719.raw F4 439.1 196.6 393.7 601.6 288 574.3 66 1.47 1 FALSE 0.00459 0.08129 0.058 -250 22523 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSSEQQGAEG [K].vSSEQQGAEG.[-] N-Term(TMT6plex) 2 G3XA22 rRNA-processing protein UTP23 homolog OS=Mus musculus OX=10090 GN=Utp23 PE=1 SV=1 G3XA22; Q9CX11 rRNA-processing protein UTP23 homolog OS=Mus musculus OX=10090 GN=Utp23 PE=1 SV=1; rRNA-processing protein UTP23 homolog OS=Mus musculus OX=10090 GN=Utp23 PE=2 SV=1 0 2 2 0.831 0 1 1 1 610.80103 1220.59477 1220.59563 -0.7 -0.00043 0/0 0 0 2071416.625 HCD 30 MS2 0 87.3 110 35.023 7767 7767 7757 QEplus033719.raw F4 106.1 53.9 84.4 73.1 89.9 116.5 68 2.84 1 FALSE 0.0006216 0.009218 0.417 -250 22530 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEVSQPR [R].aEVSQPR.[L] N-Term(TMT6plex) 2 A0A1S6GWH5 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1 A0A1S6GWH5; Q02053 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1; Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus OX=10090 GN=Uba1 PE=1 SV=1 0 2 2 0.4317 0 1 1 1 508.29071 1015.57414 1015.57337 0.76 0.00038 0/0 0 0 27438402 HCD 30 MS2 3.20824 630.7 55.213 35.0303 7769 7769 7768 QEplus033719.raw F4 684.3 513.5 610.9 604.5 724 646.9 155 2.27 1 FALSE 0.001473 0.02143 0.269 -250 22545 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MCHNINR [R].mcHNINR.[V] N-Term(TMT6plex); C2(Carbamidomethyl) 1 B2RRH9 Glutamine amidotransferase OS=Mus musculus OX=10090 GN=Gmps PE=1 SV=1 B2RRH9 Glutamine amidotransferase OS=Mus musculus OX=10090 GN=Gmps PE=1 SV=1 0 3 3 0.5839 0 1 1 1 391.86545 1173.58179 1173.58185 -0.05 -0.00002 0/0 0 0 11639296 HCD 30 MS2 78.81491 473.7 64.896 35.0373 7772 7772 7768 QEplus033719.raw F4 577.5 374.7 513.5 394.9 513.3 468.4 64 2.74 1 FALSE 0.002115 0.03935 0.177 -250 22570 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVDPQGQR [K].eVDPQGQR.[T] N-Term(TMT6plex) 7 P39053 Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=2 P39053; P39053-3; A0A0J9YUN4; P39053-4; A0A0J9YUE9; P39053-5; P39053-6 Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=2; Isoform 3 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=1; Isoform 4 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=1; Isoform 5 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1; Isoform 6 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1 0 2 2 0.5925 0 1 1 1 579.30933 1157.61138 1157.61122 0.14 0.00008 0/0 0 0 4994237 HCD 30 MS2 21.21536 300.1 110 35.0473 7776 7776 7768 QEplus033719.raw F4 326.3 307.9 326.5 253.4 289 297.8 141 3.19 1 FALSE 1.14E-05 0.0008219 0.679 -250 22583 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVQTDHNAVQR [K].tVQTDHNAVQR.[H] N-Term(TMT6plex) 4 P22892 AP-1 complex subunit gamma-1 OS=Mus musculus OX=10090 GN=Ap1g1 PE=1 SV=3 Q8CC03; Q8CBB7; Q3UKX8; P22892 GAE domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ap1g1 PE=2 SV=1; AP-1 complex subunit gamma OS=Mus musculus OX=10090 GN=Ap1g1 PE=1 SV=1; AP-1 complex subunit gamma OS=Mus musculus OX=10090 GN=Ap1g1 PE=2 SV=1; AP-1 complex subunit gamma-1 OS=Mus musculus OX=10090 GN=Ap1g1 PE=1 SV=3 0 2 2 0.5685 0 1 1 1 749.4046 1497.80193 1497.79712 3.21 0.0024 0/0 0 0 2223352.5 HCD 30 MS2 0 56.8 110 35.0523 7778 7778 7768 QEplus033719.raw F4 59.6 49.5 60.4 47.7 67.4 56.1 298 3.87 1 FALSE 1.14E-05 1.55E-11 2.151 -250 22602 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELHPGAAR [K].eLHPGAAR.[S] N-Term(TMT6plex) 5 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.4847 0 1 1 1 360.54333 1079.61545 1079.61591 -0.42 -0.00015 0/0 0 0 33687152 HCD 30 MS2 14.54008 176.9 30.787 35.0644 7782 7782 7779 QEplus033719.raw F4 215.2 70.7 166.2 251.3 91.4 266.9 196 2.95 2 FALSE 1.14E-05 0.0009566 0.666 -250 22648 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLGSDTR [K].nLGSDTR.[Y] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.3125 0 1 1 1 496.27325 991.53923 991.53699 2.26 0.00112 0/0 0 0 35570664 HCD 30 MS2 34.4424 560.6 36.344 35.0789 7788 7788 7779 QEplus033719.raw F4 654.4 217.2 418.3 907.2 473.8 692.4 192 2.08 2 FALSE 0.001395 0.01997 0.281 -250 22671 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATNNSLER [R].aTNNSLER.[A] N-Term(TMT6plex) 2 P56399 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 P56399; Q3U4W8 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 0 2 2 0.3598 0 1 1 1 567.3103 1133.61333 1133.61122 1.86 0.00106 0/0 0 0 11562093 HCD 30 MS2 51.59311 558 110 35.0912 7792 7792 7790 QEplus033719.raw F4 647 326.2 600 367.9 657.1 750 254 1.89 1 FALSE 0.002552 0.05009 0.142 -250 22692 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEAASQVQER [K].gEAASQVQER.[Q] N-Term(TMT6plex) 9 S4R1P5 Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=1 Q6ZQ59; Q91ZU6-3; Q91ZU6-4; Q91ZU6-2; A0A1D5RLZ3; E9Q9X1; A0A087WSP0; Q91ZU6; S4R1P5 MKIAA0728 protein (Fragment) OS=Mus musculus OX=10090 GN=Dst PE=2 SV=1; Isoform 3 of Dystonin OS=Mus musculus OX=10090 GN=Dst; Isoform 4 of Dystonin OS=Mus musculus OX=10090 GN=Dst; Isoform 1 of Dystonin OS=Mus musculus OX=10090 GN=Dst; Dystonin (Fragment) OS=Mus musculus OX=10090 GN=Dst PE=1 SV=1; Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=2; Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=1; Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=2; Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=1 0 2 2 0.5089 0 1 1 1 652.34631 1303.68535 1303.68036 3.83 0.0025 0/0 0 0 7608056.5 HCD 30 MS2 28.83623 264.6 110 35.0983 7795 7795 7790 QEplus033719.raw F4 299.6 212.2 268.7 228.5 272.9 305.5 233 3.36 1 FALSE 1.14E-05 2.75E-07 1.344 -250 22699 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MCHNINR [R].mcHNINR.[V] N-Term(TMT6plex); C2(Carbamidomethyl) 1 B2RRH9 Glutamine amidotransferase OS=Mus musculus OX=10090 GN=Gmps PE=1 SV=1 B2RRH9 Glutamine amidotransferase OS=Mus musculus OX=10090 GN=Gmps PE=1 SV=1 0 2 2 0.6057 0 1 1 1 587.2951 1173.58293 1173.58185 0.92 0.00054 0/0 0 0 5040395.5 HCD 30 MS2 29.25241 273.7 110 35.1008 7796 7796 7790 QEplus033719.raw F4 273.3 237.3 284.1 199.9 352.2 295.3 60 2.46 1 FALSE 0.001903 0.03256 0.204 -250 22710 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CLSSEQR [R].cLSSEQR.[L] N-Term(TMT6plex); C1(Carbamidomethyl) 2 A0A668KL65 Sorbin and SH3 domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Sorbs1 PE=1 SV=1 A0A668KL65; A0A5F8MPJ2 Sorbin and SH3 domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Sorbs1 PE=1 SV=1; Sorbin and SH3 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Sorbs1 PE=1 SV=1 0 2 2 0.2626 0 1 1 1 554.78357 1108.55986 1108.56182 -1.77 -0.00098 0/0 0 0 1891752.625 HCD 30 MS2 61.23131 203.5 110 35.1083 7799 7799 7790 QEplus033719.raw F4 252.4 96.1 177.9 257.9 184.7 251.9 137 1.79 1 FALSE 0.002216 0.04271 0.165 -250 22718 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCPNDCSNQGQCVSGR [R].scPNDcSNQGQcVSGR.[C] N-Term(TMT6plex); C2(Carbamidomethyl); C6(Carbamidomethyl); C12(Carbamidomethyl) 8 Q80YX1 Tenascin OS=Mus musculus OX=10090 GN=Tnc PE=1 SV=1 Q80YX1-4; Q80YX1; Q148T4; Q148T5; Q80YX1-2; Q80YX1-3; Q80YX1-5; Q80YX0 Isoform 4 of Tenascin OS=Mus musculus OX=10090 GN=Tnc; Tenascin OS=Mus musculus OX=10090 GN=Tnc PE=1 SV=1; Tnc protein OS=Mus musculus OX=10090 GN=Tnc PE=2 SV=1; Tnc protein OS=Mus musculus OX=10090 GN=Tnc PE=2 SV=1; Isoform 2 of Tenascin OS=Mus musculus OX=10090 GN=Tnc; Isoform 3 of Tenascin OS=Mus musculus OX=10090 GN=Tnc; Isoform 5 of Tenascin OS=Mus musculus OX=10090 GN=Tnc; Tenascin OS=Mus musculus OX=10090 GN=Tnc PE=1 SV=1 0 3 3 0.8112 0 1 1 1 685.6283 2054.87033 2054.86397 3.1 0.00212 0/0 0 0 1534338.375 HCD 30 MS2 0 38.3 110 35.1108 7800 7800 7790 QEplus033719.raw F4 46.8 25 40.5 27.6 39.8 50.2 13 4.98 1 FALSE 1.14E-05 6.09E-10 1.848 -250 22724 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIATSQNR [K].tIATSQNR.[I] N-Term(TMT6plex) 2 O35129 Prohibitin-2 OS=Mus musculus OX=10090 GN=Phb2 PE=1 SV=1 F6QPR1; O35129 Prohibitin (Fragment) OS=Mus musculus OX=10090 GN=Phb2 PE=1 SV=1; Prohibitin-2 OS=Mus musculus OX=10090 GN=Phb2 PE=1 SV=1 0 2 2 0.4158 0 1 1 1 560.3205 1119.63371 1119.63195 1.57 0.00088 0/0 0 0 46956076 HCD 30 MS2 18.64468 471.6 39.951 35.1181 7802 7802 7801 QEplus033719.raw F4 483.7 373.1 492.3 487.6 499.4 493.8 285 2.91 1 FALSE 1.14E-05 0.0001438 0.827 -250 22754 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQPVAPR [K].sQPVAPR.[A] N-Term(TMT6plex) 3 A0A0R4J139 Peptide-methionine (R)-S-oxide reductase OS=Mus musculus OX=10090 GN=Msrb3 PE=1 SV=1 D3YUC9; A0A0R4J139; Q8BU85 "L-methionine (R)-S-oxide reductase OS=Mus musculus OX=10090 GN=Msrb3 PE=1 SV=1; Peptide-methionine (R)-S-oxide reductase OS=Mus musculus OX=10090 GN=Msrb3 PE=1 SV=1; Methionine-R-sulfoxide reductase B3, mitochondrial OS=Mus musculus OX=10090 GN=Msrb3 PE=1 SV=2" 0 2 2 0.4807 0 1 1 1 492.29593 983.58458 983.58355 1.05 0.00052 0/0 0 0 23118994 HCD 30 MS2 24.07052 524 73.494 35.1296 7807 7807 7801 QEplus033719.raw F4 536.6 413.1 541.5 313.9 860.9 477.7 105 2.33 1 FALSE 0.00116 0.01551 0.327 -250 22781 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDNEQLAR [K].qDNEQLAR.[S] N-Term(TMT6plex) 2 A2A5R2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Mus musculus OX=10090 GN=Arfgef2 PE=1 SV=1 A2A5R2; Q3U2F2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Mus musculus OX=10090 GN=Arfgef2 PE=1 SV=1; SEC7 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Arfgef2 PE=2 SV=1 0 2 2 0.538 0 1 1 1 601.82098 1202.63469 1202.63268 1.67 0.00101 0/0 0 0 4076173.25 HCD 30 MS2 0 250.6 110 35.1397 7811 7811 7801 QEplus033719.raw F4 260.7 188.3 284.3 204.7 288.2 277.2 178 3.03 1 FALSE 1.14E-05 8.41E-05 0.871 -250 22791 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLDDER [R].gLDDER.[G] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 0 2 2 0.4106 0 1 1 1 467.24658 933.48589 933.48389 2.14 0.001 0/0 0 0 41142044 HCD 30 MS2 40.28513 522.4 16.568 35.1492 7814 7814 7812 QEplus033719.raw F4 540.7 439.2 529.5 423.9 715 485.8 118 2.07 1 FALSE 0.006697 0.1063 -0.011 -250 22803 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NFQAAHR [R].nFQAAHR.[R] N-Term(TMT6plex) 4 Q99JF8 PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1 PE=1 SV=1 Q99JF8; Q99JF8-2; A2BI12; F6W677 PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1 PE=1 SV=1; Isoform 2 of PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1; PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1 PE=1 SV=1; PC4 and SFRS1-interacting protein (Fragment) OS=Mus musculus OX=10090 GN=Psip1 PE=1 SV=1 0 3 3 0.5955 0 1 1 1 358.20035 1072.58649 1072.58494 1.44 0.00052 0/0 0 0 24186146 HCD 30 MS2 51.34763 192.3 47.578 35.156 7817 7817 7812 QEplus033719.raw F4 214.4 166.4 232.1 138 231.3 171.4 164 3.09 1 FALSE 1.14E-05 0.0003308 0.757 -250 22832 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQGAITER [K].sQGAITER.[L] N-Term(TMT6plex) 2 Q99KK1 Receptor expression-enhancing protein 3 OS=Mus musculus OX=10090 GN=Reep3 PE=1 SV=1 Q99KK1; A0A1W2P8A8 Receptor expression-enhancing protein 3 OS=Mus musculus OX=10090 GN=Reep3 PE=1 SV=1; Receptor expression-enhancing protein OS=Mus musculus OX=10090 GN=Reep3 PE=1 SV=1 0 2 2 0.1856 0 1 1 1 545.80756 1090.60784 1090.6054 2.23 0.00122 0/0 0 0 6887335 HCD 30 MS2 61.93957 628 110 35.1677 7822 7822 7812 QEplus033719.raw F4 605.2 542.7 695 478.3 807.8 638.7 262 1.67 1 FALSE 0.009555 0.1816 -0.119 -250 22839 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAPGPQGPR [R].gAPGPQGPR.[G] N-Term(TMT6plex) 7 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 2 2 0.0035 0 1 1 1 533.30475 1065.60222 1065.60026 1.84 0.00098 0/0 0 0 24876632 HCD 30 MS2 4.522531 579.9 67.73 35.175 7824 7824 7823 QEplus033719.raw F4 543.4 521.1 653.3 501.2 614.9 645.3 164 2.83 1 FALSE 3.35E-05 0.001392 0.632 -250 22848 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNHHEENISSK [K].nNHHEENISSk.[M] N-Term(TMT6plex); K11(TMT6plex) 10 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; Q3TYI8; B2RXX6; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 3 3 0.6739 0 1 1 1 589.64368 1766.91648 1766.91858 -1.19 -0.0007 0/0 0 0 2718910.25 HCD 30 MS2 80.18127 268.9 110 35.1775 7825 7825 7823 QEplus033719.raw F4 322.2 219.7 277.7 253.6 316.4 223.9 265 4.14 2 FALSE 1.14E-05 7.65E-10 1.829 -250 22856 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RKLESSESR [K].rkLESSESR.[S] N-Term(TMT6plex); K2(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 2 4 4 0.5756 0 1 1 1 388.23203 1549.90627 1549.90623 0.03 0.00001 0/0 0 0 55848244 HCD 30 MS2 17.98449 301.9 20.231 35.1798 7826 7826 7823 QEplus033719.raw F4 410.2 178.6 342.2 292.6 304.8 283.2 473 3.11 1 FALSE 0.00079 0.01107 0.387 -250 22860 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIAEGR [K].tIAEGR.[R] N-Term(TMT6plex) 5 Q9D104 Signal recognition particle 19 kDa protein OS=Mus musculus OX=10090 GN=Srp19 PE=1 SV=1 Q9CRF7; Q9D104; Q9D7A6; D6RHP8; G5E8T3 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Srp19 PE=2 SV=1; Signal recognition particle 19 kDa protein OS=Mus musculus OX=10090 GN=Srp19 PE=1 SV=1; Signal recognition particle 19 kDa protein OS=Mus musculus OX=10090 GN=Srp19 PE=1 SV=1; Signal recognition particle 19 kDa protein OS=Mus musculus OX=10090 GN=Srp19 PE=1 SV=1; Signal recognition particle 19 kDa protein OS=Mus musculus OX=10090 GN=Srp19 PE=1 SV=1 0 2 2 0.2542 0 1 1 2 438.26157 875.51586 875.5148 1.21 0.00053 0/0 0 0 35501320 HCD 30 MS2 24.3609 540.8 30.739 35.182 7827 7827 7823 QEplus033719.raw F4 621.5 415.4 603.2 490 612.2 502.6 154 2.36 1 FALSE 0.00237 0.04714 0.151 -250 22878 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEEERTPNHDGGK [R].tEEERTPNHDGGk.[H] N-Term(TMT6plex); K13(TMT6plex) 5 E9QB01; A0A0A6YY47 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2;Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 E9QB01; P13595-2; A0A0A6YY91; A0A0A6YY47; P13595 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2; Isoform 2 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 (Fragment) OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=3 1 4 4 0.5635 0 1 1 1 482.75296 1927.99001 1927.98739 1.36 0.00066 0/0 0 0 11296329 HCD 30 MS2 18.34503 507.9 76.002 35.1866 7829 7829 7823 QEplus033719.raw F4 548 355.9 501.6 443.9 744 454 273 3.78 2 FALSE 1.14E-05 0.0004735 0.727 -250 22886 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QCVAEGSPQR [R].qcVAEGSPQR.[V] N-Term(TMT6plex); C2(Carbamidomethyl) 1 P10493 Nidogen-1 OS=Mus musculus OX=10090 GN=Nid1 PE=1 SV=2 P10493 Nidogen-1 OS=Mus musculus OX=10090 GN=Nid1 PE=1 SV=2 0 2 2 0.6763 0 1 1 1 680.84662 1360.68596 1360.68406 1.39 0.00095 0/0 0 0 8055466.5 HCD 30 MS2 24.41172 244.2 110 35.1891 7830 7830 7823 QEplus033719.raw F4 271.3 224 317.3 238.4 196.9 217.5 132 3.12 1 FALSE 1.14E-05 3.48E-07 1.325 -250 22900 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RKLESSESR [K].rkLESSESR.[S] N-Term(TMT6plex); K2(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 2 2 2 0.5975 0 1 1 1 775.45874 1549.9102 1549.90623 2.57 0.00199 0/0 0 0 4132477.5 HCD 30 MS2 0 46.2 110 35.1941 7832 7832 7823 QEplus033719.raw F4 49 35.6 57.5 47.6 45.5 42.2 522 2.36 1 FALSE 0.001938 0.03323 0.201 -250 22959 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIHECQQR [K].vIHEcQQR.[M] N-Term(TMT6plex); C5(Carbamidomethyl) 4 Q571A2 MKIAA4106 protein (Fragment) OS=Mus musculus OX=10090 GN=Cul2 PE=2 SV=1 E0CYT5; Q571A2; Q9D4H8; Q9D4H8-2 Cullin-2 (Fragment) OS=Mus musculus OX=10090 GN=Cul2 PE=1 SV=1; MKIAA4106 protein (Fragment) OS=Mus musculus OX=10090 GN=Cul2 PE=2 SV=1; Cullin-2 OS=Mus musculus OX=10090 GN=Cul2 PE=1 SV=2; Isoform 2 of Cullin-2 OS=Mus musculus OX=10090 GN=Cul2 0 3 3 0.6899 0 1 1 1 433.5665 1298.68494 1298.68367 0.98 0.00042 0/0 0 0 24408294 HCD 30 MS2 26.37255 316.9 49.044 35.2243 7844 7844 7834 QEplus033719.raw F4 340.9 258.3 337.7 287.1 361.9 315.5 189 3.16 1 FALSE 1.14E-05 6.51E-05 0.893 -250 22966 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGTRFER [K].tGTRFER.[V] N-Term(TMT6plex) 3 Q8BJY1 26S proteasome non-ATPase regulatory subunit 5 OS=Mus musculus OX=10090 GN=Psmd5 PE=1 SV=4 Q921U5; Q8BJY1; F7BA91 Psmd5 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmd5 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 5 OS=Mus musculus OX=10090 GN=Psmd5 PE=1 SV=4; 26S proteasome non-ATPase regulatory subunit 5 (Fragment) OS=Mus musculus OX=10090 GN=Psmd5 PE=1 SV=1 1 3 3 0.3244 0 1 1 1 365.87561 1095.61228 1095.61082 1.33 0.00049 0/0 0 0 21803992 HCD 30 MS2 12.8609 395.3 47.841 35.2315 7846 7846 7845 QEplus033719.raw F4 437.1 329.4 405 328.2 505.5 366.5 148 2.25 1 FALSE 0.002309 0.04587 0.155 -250 22999 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVHYDR [K].aAVHYDR.[S] N-Term(TMT6plex) 2 O08583 THO complex subunit 4 OS=Mus musculus OX=10090 GN=Alyref PE=1 SV=3 O08583-2; O08583 Isoform 2 of THO complex subunit 4 OS=Mus musculus OX=10090 GN=Alyref; THO complex subunit 4 OS=Mus musculus OX=10090 GN=Alyref PE=1 SV=3 0 3 3 0.6811 0 1 1 1 354.19656 1060.57514 1060.57371 1.35 0.00048 0/0 0 0 24942534 HCD 30 MS2 17.18451 282.1 55.303 35.2428 7851 7851 7845 QEplus033719.raw F4 345 237.4 280.8 215.2 335.7 278.3 311 3.23 1 FALSE 0.0001504 0.003264 0.549 -250 23009 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEIACR [R].gEIAcR.[V] N-Term(TMT6plex); C5(Carbamidomethyl) 4 Q3UGC8; Q99MR8 "Propanoyl-CoA:carbon dioxide ligase subunit alpha OS=Mus musculus OX=10090 GN=Pcca PE=1 SV=1;Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Mccc1 PE=1 SV=2" A0A0G2JFQ5; Q3UGC8; D3YZC0; Q99MR8 "Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Mccc1 PE=1 SV=1; Propanoyl-CoA:carbon dioxide ligase subunit alpha OS=Mus musculus OX=10090 GN=Pcca PE=1 SV=1; Propionyl-CoA carboxylase alpha chain, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Pcca PE=1 SV=1; Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Mccc1 PE=1 SV=2" 0 2 2 0.1706 0 1 1 1 467.75317 934.49907 934.49777 1.4 0.00065 0/0 0 0 24310622 HCD 30 MS2 39.15905 545.6 31.377 35.245 7852 7852 7845 QEplus033719.raw F4 598.1 395.8 565.4 522.6 648.7 542.8 108 1.7 2 FALSE 0.004038 0.07477 0.075 -250 23028 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQQALSR [R].eQQALSR.[E] N-Term(TMT6plex) 1 Q8K297 Procollagen galactosyltransferase 1 OS=Mus musculus OX=10090 GN=Colgalt1 PE=1 SV=2 Q8K297 Procollagen galactosyltransferase 1 OS=Mus musculus OX=10090 GN=Colgalt1 PE=1 SV=2 0 2 2 0.4 0 1 1 1 530.80249 1060.5977 1060.59484 2.7 0.00143 0/0 0 0 14380911 HCD 30 MS2 9.481124 786.2 104.12 35.2519 7855 7855 7845 QEplus033719.raw F4 747.5 732.3 800.4 714.9 901 820.8 372 2.45 1 FALSE 0.000262 0.005261 0.495 -250 23034 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DMNTQENATR [R].dMNTQENATR.[A] N-Term(TMT6plex) 1 Q9DC29 ATP-binding cassette sub-family B member 6 OS=Mus musculus OX=10090 GN=Abcb6 PE=1 SV=1 Q9DC29 ATP-binding cassette sub-family B member 6 OS=Mus musculus OX=10090 GN=Abcb6 PE=1 SV=1 0 2 2 0.5368 0 1 1 1 704.83911 1408.67095 1408.66881 1.52 0.00107 0/0 0 0 12503622 HCD 30 MS2 1.670089 233 110 35.2593 7857 7857 7856 QEplus033719.raw F4 251.4 153.6 246 285 141.4 320.6 76 3.26 1 FALSE 1.14E-05 3.11E-07 1.334 -250 23055 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGAPPVR [K].sGAPPVR.[S] N-Term(TMT6plex) 2 Q8R4R6 Nucleoporin NUP35 OS=Mus musculus OX=10090 GN=Nup35 PE=1 SV=2 A2ATJ2; Q8R4R6 Nucleoporin NUP35 (Fragment) OS=Mus musculus OX=10090 GN=Nup35 PE=1 SV=1; Nucleoporin NUP35 OS=Mus musculus OX=10090 GN=Nup35 PE=1 SV=2 0 2 2 0.4863 0 1 1 1 456.77704 912.5468 912.54643 0.4 0.00018 0/0 0 0 11088765 HCD 30 MS2 35.71148 552.3 110 35.2668 7860 7860 7856 QEplus033719.raw F4 708.7 395.3 495.4 495.8 723.8 495 38 1.83 1 FALSE 0.001744 0.02973 0.218 -250 23060 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQAVQESER [R].aQAVQESER.[L] N-Term(TMT6plex) 10 F6RYD0 Pleckstrin homology-like domain family B member 1 (Fragment) OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1 Q6PDH0-2; F6RYD0; E9PWW4; E9Q307; E9PWB1; F7B296; F6RUK9; D3Z0X5; D3Z4N0; Q6PDH0 Isoform 2 of Pleckstrin homology-like domain family B member 1 OS=Mus musculus OX=10090 GN=Phldb1; Pleckstrin homology-like domain family B member 1 (Fragment) OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1; Pleckstrin homology-like domain family B member 1 OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1; Pleckstrin homology-like domain family B member 1 OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1; Pleckstrin homology-like domain family B member 1 OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1; Pleckstrin homology-like domain family B member 1 (Fragment) OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=9; Pleckstrin homology-like domain family B member 1 (Fragment) OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1; Pleckstrin homology-like domain family B member 1 OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1; Pleckstrin homology-like domain family B member 1 OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1; Pleckstrin homology-like domain family B member 1 OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1 0 2 2 0.68 0 1 1 1 623.83392 1246.66057 1246.65889 1.34 0.00084 0/0 0 0 7834344 HCD 30 MS2 4.919281 306.9 110 35.2693 7861 7861 7856 QEplus033719.raw F4 301 285.2 306 235.5 386.4 327.5 262 3.25 1 FALSE 1.14E-05 7.07E-07 1.266 -250 23067 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPTAQAAPR [K].sPTAQAAPR.[I] N-Term(TMT6plex) 1 Q9QYS9-6 Isoform 6 of Protein quaking OS=Mus musculus OX=10090 GN=Qki Q9QYS9-6 Isoform 6 of Protein quaking OS=Mus musculus OX=10090 GN=Qki 0 2 2 0.5608 0 1 1 1 564.32288 1127.63848 1127.63704 1.28 0.00072 0/0 0 0 7815529 HCD 30 MS2 43.83366 354.3 110 35.2718 7862 7862 7856 QEplus033719.raw F4 409.4 178.4 374.7 430.4 264.2 468.8 145 2.55 1 FALSE 1.14E-05 0.0002377 0.785 -250 23077 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MTTEEQQQR [K].mTTEEQQQR.[H] N-Term(TMT6plex) 2 Q8R3Y8 Interferon regulatory factor 2-binding protein 1 OS=Mus musculus OX=10090 GN=Irf2bp1 PE=1 SV=2 Q8R3Y8-2; Q8R3Y8 Isoform 2 of Interferon regulatory factor 2-binding protein 1 OS=Mus musculus OX=10090 GN=Irf2bp1; Interferon regulatory factor 2-binding protein 1 OS=Mus musculus OX=10090 GN=Irf2bp1 PE=1 SV=2 0 2 2 0.7357 0 1 1 1 690.34253 1379.67778 1379.67864 -0.62 -0.00043 0/0 0 0 5831634 HCD 30 MS2 23.96528 191.9 110 35.2743 7863 7863 7856 QEplus033719.raw F4 168 214.9 205.7 123.8 247.3 191.9 115 3.33 1 FALSE 1.14E-05 1.89E-06 1.185 -250 23082 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CEDNCIR [R].cEDNcIR.[G] N-Term(TMT6plex); C1(Carbamidomethyl); C5(Carbamidomethyl) 4 A0A0A0MQ68 "Glutaryl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gcdh PE=1 SV=1" A0A0A0MQ68; A0A1S6GWJ2; Q8BVD4; Q60759 "Glutaryl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gcdh PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Gcdh PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Gcdh PE=2 SV=1; Glutaryl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gcdh PE=1 SV=2" 0 2 2 0.4439 0 1 1 1 598.27466 1195.54204 1195.53971 1.95 0.00117 0/0 0 0 5812880.5 HCD 30 MS2 54.99554 445 110 35.2768 7864 7864 7856 QEplus033719.raw F4 502.4 289.2 471.1 435.7 355 616.5 14 2.23 1 FALSE 0.009892 0.1942 -0.129 -250 23088 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQDGGNPPR [K].vQDGGNPPR.[A] N-Term(TMT6plex) 5 F7BJK1 Protocadherin 1 (Fragment) OS=Mus musculus OX=10090 GN=Pcdh1 PE=1 SV=1 F7BJK1; Q8CFX3; E0CXD4; Q2TJH4; Q8QZT6 Protocadherin 1 (Fragment) OS=Mus musculus OX=10090 GN=Pcdh1 PE=1 SV=1; Protocadherin 1 OS=Mus musculus OX=10090 GN=Pcdh1 PE=1 SV=1; Protocadherin 1 OS=Mus musculus OX=10090 GN=Pcdh1 PE=1 SV=1; Protocadherin 1 (Fragment) OS=Mus musculus OX=10090 GN=Pcdh1 PE=2 SV=1; Pcdh1 protein (Fragment) OS=Mus musculus OX=10090 GN=Pcdh1 PE=2 SV=1 0 2 2 0.6513 0 1 1 1 584.81732 1168.62737 1168.6272 0.14 0.00008 0/0 0 0 4090001.75 HCD 30 MS2 0 198.8 110 35.2793 7865 7865 7856 QEplus033719.raw F4 201 150.3 211.4 204.7 216.1 209.5 200 2.61 1 FALSE 1.14E-05 9.78E-05 0.859 -250 23105 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHEWAR [K].aHEWAR.[A] N-Term(TMT6plex) 2 Q9CZC8 Secernin-1 OS=Mus musculus OX=10090 GN=Scrn1 PE=1 SV=1 A0A0N4SWD0; Q9CZC8 Secernin-1 (Fragment) OS=Mus musculus OX=10090 GN=Scrn1 PE=1 SV=1; Secernin-1 OS=Mus musculus OX=10090 GN=Scrn1 PE=1 SV=1 0 2 2 0.4143 0 1 1 1 499.7731 998.53893 998.53693 2 0.001 0/0 0 0 1300388.125 HCD 30 MS2 41.28618 250.5 110 35.2891 7868 7868 7867 QEplus033719.raw F4 272.1 182.6 267 212 294 275.1 78 2.1 1 FALSE 0.004449 0.07992 0.062 -250 23121 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSDVMR [K].qSDVMR.[F] N-Term(TMT6plex) 3 Q5M8Q0 Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1 Q5M8Q0; Q3U7D2; B8JKK2 Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1; Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1; Ribosomal protein L15 (Fragment) OS=Mus musculus OX=10090 GN=Rpl15 PE=1 SV=1 0 2 2 0.2765 0 1 1 1 482.75781 964.50835 964.50833 0.02 0.00001 0/0 0 0 138238912 HCD 30 MS2 8.913393 530.3 9.638 35.2937 7870 7870 7867 QEplus033719.raw F4 566.5 385.8 554.4 501.3 629 544.9 130 2.17 1 FALSE 0.003817 0.07231 0.082 -250 23149 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HWDQNER [R].hWDQNER.[Y] N-Term(TMT6plex) 8 Q3TN39 Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1 Q3TN39; Q60849; P10852; Q3TIP1; Q3U144; P10852-2; A0A0U1RPK4; Q8BTJ9 Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; CD98 heavy chain OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; Aamy domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; Isoform 2 of 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2; 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1 0 3 3 0.659 0 1 1 1 405.20242 1213.59272 1213.59115 1.29 0.00052 0/0 0 0 37579912 HCD 30 MS2 40.13443 300.1 26.384 35.3027 7874 7874 7867 QEplus033719.raw F4 409.7 209.6 276.7 254.8 408.9 241.1 54 2.61 1 FALSE 0.0006966 0.0101 0.403 -250 23155 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRDGYSYGSR [R].dRDGYSYGSR.[MS] N-Term(TMT6plex) 2 Q3TWW8 Serine/arginine-rich splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1 A0A0A6YXX6; Q3TWW8 Serine/arginine-rich-splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1; Serine/arginine-rich splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1 1 3 3 0.627 0 1 1 1 468.89563 1404.67234 1404.67052 1.29 0.0006 0/0 0 0 22502820 HCD 30 MS2 28.33626 612.6 92.741 35.3049 7875 7875 7867 QEplus033719.raw F4 621.1 496.6 688.8 540.6 699.3 629.2 69 4.29 1 FALSE 1.14E-05 3.02E-05 0.956 -250 23172 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVHYDR [K].aAVHYDR.[S] N-Term(TMT6plex) 2 O08583 THO complex subunit 4 OS=Mus musculus OX=10090 GN=Alyref PE=1 SV=3 O08583-2; O08583 Isoform 2 of THO complex subunit 4 OS=Mus musculus OX=10090 GN=Alyref; THO complex subunit 4 OS=Mus musculus OX=10090 GN=Alyref PE=1 SV=3 0 2 2 0.5294 0 1 1 1 530.789 1060.57073 1060.57371 -2.81 -0.00149 0/0 0 0 20042198 HCD 30 MS2 12.23474 533.3 47.802 35.317 7879 7879 7878 QEplus033719.raw F4 414 564.6 570.6 404.8 694.8 551 201 2.55 1 FALSE 0.001266 0.01731 0.307 -250 23181 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGSSGDAPER [K].vGSSGDAPER.[S] N-Term(TMT6plex) 3 B2RQ68 Luzp1 protein OS=Mus musculus OX=10090 GN=Luzp1 PE=2 SV=1 B2RQ68; Q6KAP6; B7ZW89 Luzp1 protein OS=Mus musculus OX=10090 GN=Luzp1 PE=2 SV=1; MFLJ00226 protein (Fragment) OS=Mus musculus OX=10090 GN=mFLJ00226 PE=4 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Luzp1 PE=2 SV=1 0 2 2 0.5714 0 1 1 1 602.31274 1203.61821 1203.6167 1.26 0.00076 0/0 0 0 10500487 HCD 30 MS2 41.55611 475 110 35.3195 7880 7880 7878 QEplus033719.raw F4 478.9 400 484.9 379.6 588.8 518 136 2.45 1 FALSE 1.14E-05 1.32E-05 1.025 -250 23204 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNQEESGMEAR [K].dNQEESGMEAR.[N] N-Term(TMT6plex) 1 Q80W54 CAAX prenyl protease 1 homolog OS=Mus musculus OX=10090 GN=Zmpste24 PE=1 SV=2 Q80W54 CAAX prenyl protease 1 homolog OS=Mus musculus OX=10090 GN=Zmpste24 PE=1 SV=2 0 2 2 0.7221 0 1 1 1 747.83899 1494.6707 1494.6692 1 0.00075 0/0 0 0 12678988 HCD 30 MS2 11.91619 236.1 110 35.3311 7885 7885 7878 QEplus033719.raw F4 227.3 179.9 248.7 205.7 274.4 280.8 29 4.39 1 FALSE 1.14E-05 1.31E-09 1.785 -250 23215 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVYSDR [R].sVYSDR.[Y] N-Term(TMT6plex) 8 P43346 Deoxycytidine kinase OS=Mus musculus OX=10090 GN=Dck PE=1 SV=1 Q9QX60-2; P43346; A0A0U1RPX3; Q9QX60; Q80US6; Q91XI5; Q3TKB4; Q504N4 "Isoform 2 of Deoxyguanosine kinase, mitochondrial OS=Mus musculus OX=10090 GN=Dguok; Deoxycytidine kinase OS=Mus musculus OX=10090 GN=Dck PE=1 SV=1; Deoxyguanosine kinase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Dguok PE=1 SV=1; Deoxyguanosine kinase, mitochondrial OS=Mus musculus OX=10090 GN=Dguok PE=1 SV=3; Deoxycytidine kinase OS=Mus musculus OX=10090 GN=Dck PE=2 SV=2; Deoxyguanosine kinase 3 OS=Mus musculus OX=10090 GN=Dguok PE=2 SV=1; dNK domain-containing protein OS=Mus musculus OX=10090 GN=Dguok PE=2 SV=1; Deoxyguanosine kinase, mitochondrial OS=Mus musculus OX=10090 GN=Dguok PE=1 SV=1" 0 2 2 0.4727 0 1 1 1 478.25659 955.50591 955.50463 1.34 0.00064 0/0 0 0 6930030.5 HCD 30 MS2 38.93306 543.6 110 35.3361 7887 7887 7878 QEplus033719.raw F4 529.6 432.5 573.1 489.4 655.3 582 36 2.56 1 FALSE 0.002157 0.04087 0.171 -250 23220 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TETQEK [K].tETQEk.[N] N-Term(TMT6plex); K6(TMT6plex) 5 P20065 Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x PE=1 SV=1 P20065-2; A0A0N4SVF0; P20065; A6H6H4; P21752 Isoform Short of Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x; Thymosin beta-10 OS=Mus musculus OX=10090 GN=Tmsb10 PE=1 SV=1; Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x PE=1 SV=1; Thymosin beta OS=Mus musculus OX=10090 GN=Tmsb10 PE=1 SV=1; SWISS-PROT:P21752 (Bos taurus) Thymosin beta-9 0 2 2 0.4365 0 1 1 1 597.34241 1193.67754 1193.67779 -0.21 -0.00013 0/0 0 0 5516331 HCD 30 MS2 50.4971 589.4 110 35.3386 7888 7888 7878 QEplus033719.raw F4 781.9 308.1 594.9 387.1 532.2 932.4 254 1.97 1 TRUE 0.007328 0.1174 -0.037 -250 23237 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPDSTANVR [R].sPDSTANVR.[I] N-Term(TMT6plex) 4 Q91Z67 SLIT-ROBO Rho GTPase-activating protein 2 OS=Mus musculus OX=10090 GN=Srgap2 PE=1 SV=2 Q91Z67; A0A087WNM1; A0A2X0SZ45; A0A087WSQ1 SLIT-ROBO Rho GTPase-activating protein 2 OS=Mus musculus OX=10090 GN=Srgap2 PE=1 SV=2; SLIT-ROBO Rho GTPase-activating protein 2 OS=Mus musculus OX=10090 GN=Srgap2 PE=1 SV=1; SRGAP2 (Fragment) OS=Mus musculus OX=10090 GN=SRGAP2 PE=4 SV=1; SLIT-ROBO Rho GTPase-activating protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Srgap2 PE=1 SV=1 0 2 2 0.52 0 1 1 1 588.31702 1175.62676 1175.62178 4.23 0.00249 0/0 0 0 6568345.5 HCD 30 MS2 19.42588 366.7 110 35.3484 7891 7891 7889 QEplus033719.raw F4 369.3 326.1 407 288.7 416.9 392.2 233 2.5 1 FALSE 3.35E-05 0.001288 0.639 -250 23244 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous INHEGEVNR [K].iNHEGEVNR.[A] N-Term(TMT6plex) 8 Q8C5H3; Q60972 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Rbbp7 PE=2 SV=1;Histone-binding protein RBBP4 OS=Mus musculus OX=10090 GN=Rbbp4 PE=1 SV=5 Q8C5H3; Q3UX53; Q3UJI2; Q60973; A2AFJ1; A2AFI9; Q60972; F6ZLC6 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Rbbp7 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Rbbp7 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Rbbp7 PE=2 SV=1; Histone-binding protein RBBP7 OS=Mus musculus OX=10090 GN=Rbbp7 PE=1 SV=1; Histone-binding protein RBBP7 OS=Mus musculus OX=10090 GN=Rbbp7 PE=1 SV=1; Histone-binding protein RBBP7 OS=Mus musculus OX=10090 GN=Rbbp7 PE=1 SV=1; Histone-binding protein RBBP4 OS=Mus musculus OX=10090 GN=Rbbp4 PE=1 SV=5; Histone-binding protein RBBP7 (Fragment) OS=Mus musculus OX=10090 GN=Rbbp7 PE=1 SV=8 0 3 3 0.5258 0 1 1 1 432.90045 1296.6868 1296.68578 0.79 0.00034 0/0 0 0 76868824 HCD 30 MS2 4.623557 236.8 16.73 35.3529 7893 7893 7889 QEplus033719.raw F4 264.2 212.7 244.6 185 305.4 208.8 299 4.45 2 FALSE 1.14E-05 4.49E-06 1.114 -250 23254 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAPDQEVR [K].sAPDQEVR.[I] N-Term(TMT6plex) 2 Q543P7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Arl3 PE=1 SV=1 Q543P7; A0A494BAJ6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Arl3 PE=1 SV=1; ADP-ribosylation factor-like protein 3 OS=Mus musculus OX=10090 GN=Arl3 PE=1 SV=1 0 2 2 0.6263 0 1 1 1 565.80438 1130.60149 1130.60032 1.04 0.00059 0/0 0 0 19920034 HCD 30 MS2 16.65913 618 110 35.3554 7894 7894 7889 QEplus033719.raw F4 627.4 617.8 637.6 421.7 813.3 589.9 187 2.89 1 FALSE 1.14E-05 7.22E-05 0.884 -250 23264 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REFEER [R].rEFEER.[H] N-Term(TMT6plex) 3 Q99J99 3-mercaptopyruvate sulfurtransferase OS=Mus musculus OX=10090 GN=Mpst PE=1 SV=4 A0A2R8VHE5; A0A2R8VHT1; Q99J99 3-mercaptopyruvate sulfurtransferase (Fragment) OS=Mus musculus OX=10090 GN=Mpst PE=1 SV=1; 3-mercaptopyruvate sulfurtransferase (Fragment) OS=Mus musculus OX=10090 GN=Mpst PE=1 SV=1; 3-mercaptopyruvate sulfurtransferase OS=Mus musculus OX=10090 GN=Mpst PE=1 SV=4 1 3 3 0.2456 0 1 1 1 365.53189 1094.58112 1094.57919 1.76 0.00064 0/0 0 0 13778821 HCD 30 MS2 67.85168 443.4 51.774 35.3601 7896 7896 7889 QEplus033719.raw F4 463.2 384.2 497.4 358.3 532.7 424.6 213 2.85 1 FALSE 0.00219 0.04241 0.166 -250 23273 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous INHEGEVNR [K].iNHEGEVNR.[A] N-Term(TMT6plex) 8 Q8C5H3; Q60972 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Rbbp7 PE=2 SV=1;Histone-binding protein RBBP4 OS=Mus musculus OX=10090 GN=Rbbp4 PE=1 SV=5 Q8C5H3; Q3UX53; Q3UJI2; Q60973; A2AFJ1; A2AFI9; Q60972; F6ZLC6 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Rbbp7 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Rbbp7 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Rbbp7 PE=2 SV=1; Histone-binding protein RBBP7 OS=Mus musculus OX=10090 GN=Rbbp7 PE=1 SV=1; Histone-binding protein RBBP7 OS=Mus musculus OX=10090 GN=Rbbp7 PE=1 SV=1; Histone-binding protein RBBP7 OS=Mus musculus OX=10090 GN=Rbbp7 PE=1 SV=1; Histone-binding protein RBBP4 OS=Mus musculus OX=10090 GN=Rbbp4 PE=1 SV=5; Histone-binding protein RBBP7 (Fragment) OS=Mus musculus OX=10090 GN=Rbbp7 PE=1 SV=8 0 2 2 0.5172 0 1 1 1 648.84729 1296.6873 1296.68578 1.18 0.00076 0/0 0 0 10654371 HCD 30 MS2 11.0508 340.9 110 35.3627 7897 7897 7889 QEplus033719.raw F4 358.2 347.9 336.8 217.3 478.2 306.8 284 3.19 2 FALSE 1.14E-05 1.52E-06 1.203 -250 23283 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDNTLNQR [K].tDNTLNQR.[A] N-Term(TMT6plex) 4 Q91Z31 Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 PE=1 SV=2 Q91Z31; A0A0G2JGW0; Q3V328; Q91Z31-2 Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 PE=1 SV=2; Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 PE=1 SV=1; Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 PE=1 SV=1; Isoform 2 of Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 0 2 2 0.4392 0 1 1 1 595.82037 1190.63347 1190.63268 0.66 0.0004 0/0 0 0 9938574 HCD 30 MS2 19.21317 481.6 110 35.3652 7898 7898 7889 QEplus033719.raw F4 499.1 418.8 428.3 334.5 758.1 450.9 237 2.55 1 FALSE 1.14E-05 0.0002488 0.781 -250 23297 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAEEAEEAR [R].aAEEAEEAR.[E] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.4441 0 1 1 1 602.80408 1204.60088 1204.60071 0.14 0.00008 0/0 0 0 22484182 HCD 30 MS2 35.38024 452.8 68.974 35.3771 7902 7902 7900 QEplus033719.raw F4 442.5 326.8 443.3 428.5 543.1 532.4 117 3.04 2 FALSE 1.14E-05 4.65E-05 0.921 -250 23318 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTGVVTR [R].gTGVVTR.[R] N-Term(TMT6plex) 6 E9PUD2 Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1 E9PUD2; Q8K1M6-3; Q8K1M6; Q8K1M6-5; Q8K1M6-2; Q3U4P3 Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1; Isoform 3 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=2; Isoform 5 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Isoform 2 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein (Fragment) OS=Mus musculus OX=10090 GN=Dnm1l PE=2 SV=1 0 2 2 0.108 0 1 1 1 459.78369 918.56011 918.557 3.39 0.00155 0/0 0 0 26638260 HCD 30 MS2 48.86419 564.8 30.748 35.3861 7906 7906 7900 QEplus033719.raw F4 639.9 393.4 565.2 620.2 603.4 566.8 124 2.13 1 FALSE 0.001275 0.01742 0.305 -250 23352 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAGTATQMR [K].sAGTATQMR.[Q] N-Term(TMT6plex) 3 Q61337 Bcl2-associated agonist of cell death OS=Mus musculus OX=10090 GN=Bad PE=1 SV=1 Q61337; Q3U9H3; Q3TFU7 Bcl2-associated agonist of cell death OS=Mus musculus OX=10090 GN=Bad PE=1 SV=1; Bcl2-associated agonist of cell death OS=Mus musculus OX=10090 GN=Bad PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bad PE=2 SV=1 0 2 2 0.5774 0 1 1 1 576.30652 1151.60576 1151.60402 1.51 0.00087 0/0 0 0 5883093 HCD 30 MS2 50.5 381.1 110 35.4056 7913 7913 7911 QEplus033719.raw F4 375.2 331 402.2 296.1 471.7 410.6 154 2.39 1 FALSE 1.14E-05 0.0007412 0.688 -250 23361 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAADAVR [R].dAADAVR.[E] N-Term(TMT6plex) 3 P84104 Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3 PE=1 SV=1 P84104-2; P84104; Q9D6W4 Isoform Short of Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3; Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3 PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf3 PE=2 SV=1 0 2 2 0.2617 0 1 1 1 473.76215 946.51702 946.51553 1.57 0.00075 0/0 0 0 85066752 HCD 30 MS2 15.4748 488.3 14.151 35.4078 7914 7914 7911 QEplus033719.raw F4 540.3 383.8 495 440 546 524.4 177 2.14 1 FALSE 0.001248 0.01686 0.311 -250 23368 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEHEETSAIR [K].eEHEETSAIR.[V] N-Term(TMT6plex) 1 Q6NXL1 "Sec24-related gene family, member D (S. cerevisiae) OS=Mus musculus OX=10090 GN=Sec24d PE=1 SV=1" Q6NXL1 "Sec24-related gene family, member D (S. cerevisiae) OS=Mus musculus OX=10090 GN=Sec24d PE=1 SV=1" 0 3 3 0.7629 0 1 1 1 477.24286 1429.71402 1429.71205 1.38 0.00066 0/0 0 0 7745701 HCD 30 MS2 12.20564 302.8 110 35.4129 7916 7916 7911 QEplus033719.raw F4 339.5 221.7 294.9 276.8 400.8 283.3 110 4.64 1 FALSE 1.14E-05 3.58E-07 1.322 -250 23375 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEAAAATPQR [R].tEAAAATPQR.[S] N-Term(TMT6plex) 3 A6H663 BCL2-associated athanogene 3 OS=Mus musculus OX=10090 GN=Bag3 PE=2 SV=1 Q3TAM9; A6H663; Q9JLV1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Bag3 PE=2 SV=1; BCL2-associated athanogene 3 OS=Mus musculus OX=10090 GN=Bag3 PE=2 SV=1; BAG family molecular chaperone regulator 3 OS=Mus musculus OX=10090 GN=Bag3 PE=1 SV=2 0 2 2 1 0 1 1 1 622.84381 1244.68035 1244.67963 0.57 0.00036 0/0 0 0 8177426.5 HCD 30 MS2 6.149086 281.1 110 35.4154 7917 7917 7911 QEplus033719.raw F4 299.6 215.8 291.3 260.6 280.3 339.2 310 3.28 1 FALSE 1.14E-05 1.39E-08 1.59 -250 23376 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQQEEMMR [R].rQQEEMMR.[R] N-Term(TMT6plex) 6 Q3TMM5; Q3UM20 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1 Q3TMM5; Q3TTV7; Q3TFC2; Q3UM20; Q3TF40; Q99K48 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Non-POU domain-containing octamer-binding protein OS=Mus musculus OX=10090 GN=Nono PE=1 SV=3 1 2 2 0.5862 0 1 1 1 668.83771 1336.66814 1336.66631 1.37 0.00092 0/0 0 0 4151666.5 HCD 30 MS2 0 112.1 110 35.4179 7918 7918 7911 QEplus033719.raw F4 116.2 106.8 109.8 85.1 138.9 116.1 122 2.9 2 FALSE 0.0005944 0.008766 0.425 -250 23382 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEEAQPAAGTDQR [R].aEEAQPAAGTDQR.[H] N-Term(TMT6plex) 1 Q3UXJ3 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpll PE=2 SV=1 Q3UXJ3 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpll PE=2 SV=1 0 2 2 0.7877 0 1 1 1 786.89441 1572.78154 1572.78153 0.01 0.00001 0/0 0 0 1681149.25 HCD 30 MS2 0 81.5 110 35.4204 7919 7919 7911 QEplus033719.raw F4 83.9 82.2 87 53 105.3 77.5 140 4.38 1 FALSE 1.14E-05 1.83E-13 2.517 -250 23392 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATLGETHR [K].aTLGETHR.[L] N-Term(TMT6plex) 2 A0A0G2JDK2 Glucosylceramidase OS=Mus musculus OX=10090 GN=Gba PE=1 SV=1 A0A0G2JDK2; P17439 Glucosylceramidase OS=Mus musculus OX=10090 GN=Gba PE=1 SV=1; Lysosomal acid glucosylceramidase OS=Mus musculus OX=10090 GN=Gba PE=1 SV=1 0 3 3 0.6272 0 1 1 1 371.87903 1113.62253 1113.62139 1.03 0.00038 0/0 0 0 17904334 HCD 30 MS2 52.20969 179.1 43.563 35.4249 7921 7921 7911 QEplus033719.raw F4 200.9 128 178.8 191.6 155.1 219.9 159 3.38 1 FALSE 1.14E-05 0.0001044 0.853 -250 23408 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGSECPDR [R].vGSEcPDR.[L] N-Term(TMT6plex); C5(Carbamidomethyl) 5 Q99LF8 Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1 Q99LF8; Q3TUS5; Q3UX16; Q3TSA5; Q6PHQ9 Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; PABC domain-containing protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; PABC domain-containing protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1 0 2 2 0.1379 0 1 1 1 574.78387 1148.56047 1148.55674 3.25 0.00187 0/0 0 0 21654888 HCD 30 MS2 10.96209 834.3 110 35.4347 7924 7924 7922 QEplus033719.raw F4 876.3 661.3 899.4 754.5 901.6 912.4 64 2.32 1 FALSE 0.0006869 0.01004 0.404 -250 23417 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDQEVVR [R].nDQEVVR.[S] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.4145 0 1 1 1 544.79919 1088.59111 1088.58975 1.25 0.00068 0/0 0 0 70885824 HCD 30 MS2 17.15606 460.4 19.554 35.4392 7926 7926 7922 QEplus033719.raw F4 550.2 220.6 467.5 533.6 324.2 666.1 255 2.75 1 FALSE 0.0005556 0.008554 0.429 -250 23424 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLDSQTR [K].tLDSQTR.[T] N-Term(TMT6plex) 11 Q9Z1R2 Large proline-rich protein BAG6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1 S4R183; G3UXT8; G3UYZ0; Q3TDL4; A0A1B0GX81; G3V013; Q9Z1R2; G3UZT6; G3UYQ2; Q3UF95; Q8HWH4 Large proline-rich protein BAG6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; Large proline-rich protein BAG6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=8; BCL2-associated athanogene 6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; Large proline-rich protein BAG6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=9; Large proline-rich protein BAG6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=2 SV=1 0 2 2 0.4538 0 1 1 1 525.2937 1049.58013 1049.57885 1.21 0.00064 0/0 0 0 22333204 HCD 30 MS2 26.29167 728.3 75.458 35.4437 7928 7928 7922 QEplus033719.raw F4 820.8 567.2 670 622.9 986.4 702.2 227 2.49 1 FALSE 0.001134 0.01508 0.332 -250 23451 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TRSDIVSR [R].tRSDIVSR.[A] N-Term(TMT6plex) 6 Q922R8 Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=3 Q3TML0; Q922R8; F7DBQ0; Q3THH1; Q9DAB4; Q3TJL8 Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=1; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=3; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=1; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=2 SV=1; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=2 SV=1; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=2 SV=1 1 2 2 0.1379 0 1 1 1 581.84088 1162.67449 1162.67415 0.29 0.00017 0/0 0 0 6430031.5 HCD 30 MS2 30.26762 275.7 110 35.4535 7932 7932 7922 QEplus033719.raw F4 294.6 218.6 277.3 219.8 352.5 291.4 382 1.74 1 FALSE 0.003448 0.06652 0.097 -250 23476 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQQEEMMR [R].rQQEEMMR.[R] N-Term(TMT6plex) 6 Q3TMM5; Q3UM20 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1 Q3TMM5; Q3TTV7; Q3TFC2; Q3UM20; Q3TF40; Q99K48 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Non-POU domain-containing octamer-binding protein OS=Mus musculus OX=10090 GN=Nono PE=1 SV=3 1 3 3 0.6458 0 1 1 1 446.22748 1336.66788 1336.66631 1.18 0.00053 0/0 0 0 89167952 HCD 30 MS2 31.13254 263.8 11.868 35.4656 7936 7936 7933 QEplus033719.raw F4 279.4 231.6 300.7 219.4 296.8 254.8 128 4.63 2 FALSE 1.14E-05 1.10E-05 1.04 -250 23491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVAGPR [R].tAVAGPR.[A] N-Term(TMT6plex) 9 A0A087WQ94 Tensin 1 (Fragment) OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1 Q7TSV1; A0A087WQ94; E9Q0S6; A0A087WQM0; A0A6I8MWZ2; A0A087WRU0; A0A1D5RM59; Q3U0Q9; A0A087WQS0 Tns1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tns1 PE=2 SV=1; Tensin 1 (Fragment) OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; Tensin 1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; Tensin 1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; Tensin 1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; Tensin 1 (Fragment) OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; Tensin 1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; SH2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tns1 PE=2 SV=1; Tensin 1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1 0 2 2 0.4492 0 1 1 1 450.77707 900.54686 900.54643 0.48 0.00022 0/0 0 0 19477946 HCD 30 MS2 29.39805 734 109.108 35.4703 7938 7938 7933 QEplus033719.raw F4 809 499.3 707.5 714.9 908.7 764.6 89 2.36 1 FALSE 0.0008363 0.01156 0.38 -250 23496 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQAPPVR [K].qQAPPVR.[N] N-Term(TMT6plex) 1 O08553 Dihydropyrimidinase-related protein 2 OS=Mus musculus OX=10090 GN=Dpysl2 PE=1 SV=2 O08553 Dihydropyrimidinase-related protein 2 OS=Mus musculus OX=10090 GN=Dpysl2 PE=1 SV=2 0 2 2 0.5045 0 1 1 1 512.80927 1024.61125 1024.61009 1.13 0.00058 0/0 0 0 18279570 HCD 30 MS2 20.39714 555.5 63.01 35.4725 7939 7939 7933 QEplus033719.raw F4 556.3 540.8 543.7 315.9 927.2 448.9 130 2.2 1 FALSE 0.0006383 0.009762 0.408 -250 23513 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENAEEYR [R].eNAEEYR.[R] N-Term(TMT6plex) 5 Q3V1T4 Prolyl 3-hydroxylase 1 OS=Mus musculus OX=10090 GN=P3h1 PE=1 SV=2 Q3V1T4; Q3V1T4-2; A2A7Q5; A6PW84; Q3V1T4-3 Prolyl 3-hydroxylase 1 OS=Mus musculus OX=10090 GN=P3h1 PE=1 SV=2; Isoform 2 of Prolyl 3-hydroxylase 1 OS=Mus musculus OX=10090 GN=P3h1; Procollagen-proline 3-dioxygenase OS=Mus musculus OX=10090 GN=P3h1 PE=1 SV=1; Procollagen-proline 3-dioxygenase OS=Mus musculus OX=10090 GN=P3h1 PE=1 SV=1; Isoform 3 of Prolyl 3-hydroxylase 1 OS=Mus musculus OX=10090 GN=P3h1 0 2 2 0.4228 0 1 1 1 570.28052 1139.55376 1139.55303 0.64 0.00036 0/0 0 0 11545962 HCD 30 MS2 7.118685 494.8 110 35.4798 7942 7942 7933 QEplus033719.raw F4 489.9 429 524.3 448.2 580.2 497.3 76 2.72 1 FALSE 0.0004091 0.007312 0.452 -250 23534 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAEITR [R].qAEITR.[L] N-Term(TMT6plex) 6 Q9JK48 Endophilin-B1 OS=Mus musculus OX=10090 GN=Sh3glb1 PE=1 SV=1 Q9JK48-3; A0A0G2JE45; Q9JK48; A0A0G2JEC4; Q9JK48-2; A0A0G2JF57 Isoform 3 of Endophilin-B1 OS=Mus musculus OX=10090 GN=Sh3glb1; Endophilin-B1 (Fragment) OS=Mus musculus OX=10090 GN=Sh3glb1 PE=1 SV=1; Endophilin-B1 OS=Mus musculus OX=10090 GN=Sh3glb1 PE=1 SV=1; Endophilin-B1 OS=Mus musculus OX=10090 GN=Sh3glb1 PE=1 SV=1; Isoform 2 of Endophilin-B1 OS=Mus musculus OX=10090 GN=Sh3glb1; Endophilin-B1 (Fragment) OS=Mus musculus OX=10090 GN=Sh3glb1 PE=1 SV=1 0 2 2 0.2667 0 1 1 2 473.78 946.55272 946.55191 0.86 0.00041 0/0 0 0 64719248 HCD 30 MS2 33.81755 602.7 16.678 35.4944 7947 7947 7944 QEplus033719.raw F4 691.1 389.5 672 563.9 647.3 652.6 163 2.25 1 FALSE 0.003674 0.0704 0.087 -250 23540 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRVTVQER [K].dRVTVQER.[E] N-Term(TMT6plex) 1 C0HKD9 Microfibrillar-associated protein 1B OS=Mus musculus OX=10090 GN=Mfap1b PE=1 SV=1 C0HKD9 Microfibrillar-associated protein 1B OS=Mus musculus OX=10090 GN=Mfap1b PE=1 SV=1 1 3 3 0.5285 0 1 1 1 411.23734 1231.69745 1231.69561 1.49 0.00061 0/0 0 0 17643510 HCD 30 MS2 17.90819 366.4 74.549 35.4966 7948 7948 7944 QEplus033719.raw F4 398.9 305.2 392.9 302.6 409.2 389.4 344 3.86 1 FALSE 1.14E-05 0.0007125 0.692 -250 23549 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYASQR [K].vYASQR.[M] N-Term(TMT6plex) 2 Q9D8E6 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3 Q9D8E6; Q9CSM5 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3; 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=2 SV=2 0 2 2 0.3394 0 1 1 1 476.77487 952.54247 952.54135 1.18 0.00056 0/0 0 0 13537091 HCD 30 MS2 56.83601 827.5 56.889 35.4989 7949 7949 7944 QEplus033719.raw F4 902.5 629.3 867.8 762.2 994.5 808.9 51 2.21 1 FALSE 0.003075 0.05996 0.114 -250 23566 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQQSQTAY [R].qQQSQTAY.[-] N-Term(TMT6plex) 2 Q8R1B4 Eukaryotic translation initiation factor 3 subunit C OS=Mus musculus OX=10090 GN=Eif3c PE=1 SV=1 Q8R1B4; Q66JU1 Eukaryotic translation initiation factor 3 subunit C OS=Mus musculus OX=10090 GN=Eif3c PE=1 SV=1; Eif3c protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3c PE=2 SV=1 0 2 2 0.7705 0 1 1 1 591.80292 1182.59856 1182.59523 2.81 0.00166 0/0 0 0 9077753 HCD 30 MS2 41.8875 277.7 110 35.5037 7951 7951 7944 QEplus033719.raw F4 278.1 223.5 298.9 286.4 274.6 304.8 115 2.92 1 FALSE 0.001359 0.01933 0.287 -250 23571 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALEDGGQR [K].aLEDGGQR.[S] N-Term(TMT6plex) 15 A0A0N4SV80 Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Zfp638 PE=1 SV=1 Q3TQM2; Q61464-4; Q3TZK9; A0A0N4SV80; Q3TQ35; Q61464; A0A0N4SVM8; Q61464-2; A0A0N4SVI8; E9QML5; Q3TNM0; E9QKZ7; Q61464-7; Q61464-5; A0A0N4SV38 RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Zfp638 PE=2 SV=1; Isoform 4 of Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Znf638; Zinc finger protein 638 (Fragment) OS=Mus musculus OX=10090 GN=Zfp638 PE=1 SV=1; Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Zfp638 PE=1 SV=1; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Zfp638 PE=2 SV=1; Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Znf638 PE=1 SV=2; Zinc finger protein 638 (Fragment) OS=Mus musculus OX=10090 GN=Zfp638 PE=1 SV=1; Isoform 2 of Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Znf638; Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Zfp638 PE=1 SV=1; Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Zfp638 PE=1 SV=2; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Zfp638 PE=2 SV=1; Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Zfp638 PE=1 SV=1; Isoform 6 of Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Znf638; Isoform 5 of Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Znf638; Zinc finger protein 638 OS=Mus musculus OX=10090 GN=Zfp638 PE=1 SV=1 0 2 2 0.2364 0 1 1 1 537.79187 1074.57646 1074.5741 2.2 0.00118 0/0 0 0 8612055 HCD 30 MS2 17.41264 482.8 110 35.5062 7952 7952 7944 QEplus033719.raw F4 503.9 432.8 483.3 374.8 625.9 476.3 220 2.75 1 FALSE 1.14E-05 6.14E-05 0.897 -250 23576 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPDDEGEEDD [R].ePDDEGEEDD.[-] N-Term(TMT6plex) 2 O35381 Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 D3Z7M9; O35381 Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 0 2 2 1 0 1 1 1 689.77191 1378.53655 1378.53314 2.47 0.0017 0/0 0 0 4524581 HCD 30 MS2 0 67.6 110 35.5087 7953 7953 7944 QEplus033719.raw F4 66.5 61.7 81.2 52.1 77 67.2 1 3.35 1 FALSE 5.44E-05 0.002176 0.59 -250 23584 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HWDQNER [R].hWDQNER.[Y] N-Term(TMT6plex) 8 Q3TN39 Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1 Q3TN39; Q60849; P10852; Q3TIP1; Q3U144; P10852-2; A0A0U1RPK4; Q8BTJ9 Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; CD98 heavy chain OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; Aamy domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; Isoform 2 of 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2; 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1 0 2 2 0.7333 0 1 1 1 607.30176 1213.59624 1213.59115 4.19 0.00254 0/0 0 0 1268148.625 HCD 30 MS2 0 170.2 110 35.5185 7956 7956 7955 QEplus033719.raw F4 181.1 130.4 178.6 159.1 198.5 173.6 53 2.25 1 FALSE 0.001702 0.02803 0.227 -250 23596 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YHTVNGHNCEVR [K].yHTVNGHNcEVR.[K] N-Term(TMT6plex); C9(Carbamidomethyl) 9 Q3UK83 Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1 B7ZWG9; V9GXF8; Q3TFB1; Q3UK83; P49312; Q3U7F3; P49312-2; Q3TIK8; Q5EBP8 Hnrnpa1l2 protein OS=Mus musculus OX=10090 GN=Hnrnpa1l2 PE=2 SV=1; Predicted gene 5269 OS=Mus musculus OX=10090 GN=Gm5269 PE=1 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=2; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Isoform Short of Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=1 0 4 4 0.7971 0 1 1 1 429.46274 1714.82912 1714.8281 0.59 0.00025 0/0 0 0 38240656 HCD 30 MS2 40.43926 289.7 31.734 35.5278 7960 7960 7955 QEplus033719.raw F4 537.9 115.5 312.9 272.8 150.9 348 121 4.83 1 FALSE 1.14E-05 1.83E-09 1.757 -250 23623 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLQCPR [K].rLQcPR.[V] N-Term(TMT6plex); C4(Carbamidomethyl) 1 Q8CG76 Aflatoxin B1 aldehyde reductase member 2 OS=Mus musculus OX=10090 GN=Akr7a2 PE=1 SV=3 Q8CG76 Aflatoxin B1 aldehyde reductase member 2 OS=Mus musculus OX=10090 GN=Akr7a2 PE=1 SV=3 1 3 3 0.4656 0 1 1 1 353.54193 1058.61124 1058.60905 2.07 0.00073 0/0 0 0 14559037 HCD 30 MS2 51.67752 227.5 51.1 35.5368 7964 7964 7955 QEplus033719.raw F4 273.2 154.1 247.8 216.8 222.4 250.7 260 2.62 1 FALSE 0.002688 0.05355 0.132 -250 23630 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HAIPSTER [R].hAIPSTER.[G] N-Term(TMT6plex) 2 Q6A0A2 La-related protein 4B OS=Mus musculus OX=10090 GN=Larp4b PE=1 SV=2 Q6A0A2-3; Q6A0A2 Isoform 3 of La-related protein 4B OS=Mus musculus OX=10090 GN=Larp4b; La-related protein 4B OS=Mus musculus OX=10090 GN=Larp4b PE=1 SV=2 0 3 3 0.36 0 1 1 1 380.55029 1139.63633 1139.63704 -0.62 -0.00024 0/0 0 0 6234546 HCD 30 MS2 43.09874 345.7 110 35.5393 7965 7965 7955 QEplus033719.raw F4 597.9 186.5 330.9 298.1 334.4 326.6 174 2.5 1 FALSE 0.0004793 0.007646 0.446 -250 23640 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLEEQR [K].nLEEQR.[E] N-Term(TMT6plex) 5 Q6Y5D8 Rho GTPase-activating protein 10 OS=Mus musculus OX=10090 GN=Arhgap10 PE=1 SV=2 Q6Y5D8; Q8C9L7; Q9CTN7; Q6Y5D8-3; Q6Y5D8-2 Rho GTPase-activating protein 10 OS=Mus musculus OX=10090 GN=Arhgap10 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Arhgap10 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Arhgap10 PE=2 SV=3; Isoform 3 of Rho GTPase-activating protein 10 OS=Mus musculus OX=10090 GN=Arhgap10; Isoform 2 of Rho GTPase-activating protein 10 OS=Mus musculus OX=10090 GN=Arhgap10 0 2 2 0.0896 0 1 1 1 509.2818 1017.55632 1017.55264 3.62 0.00184 0/0 0 0 5380665.5 HCD 30 MS2 46.88007 545 110 35.5466 7967 7967 7966 QEplus033719.raw F4 669.9 406.1 495.6 509.3 668 520.8 257 2.01 1 FALSE 0.002662 0.05304 0.133 -250 23649 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGNIGDGGGAADR [R].gGNIGDGGGAADR.[V] N-Term(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 0 2 2 0.6738 0 1 1 1 673.33716 1345.66704 1345.66577 0.94 0.00063 0/0 0 0 18523626 HCD 30 MS2 0 426.3 110 35.5491 7968 7968 7966 QEplus033719.raw F4 477 354.2 477 367.2 426.2 456.4 115 4.69 1 FALSE 1.14E-05 3.22E-14 2.66 -250 23655 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGGGGGGGGSWGGR [K].sGGGGGGGGSWGGR.[S] N-Term(TMT6plex) 1 Q9CX86 Heterogeneous nuclear ribonucleoprotein A0 OS=Mus musculus OX=10090 GN=Hnrnpa0 PE=1 SV=1 Q9CX86 Heterogeneous nuclear ribonucleoprotein A0 OS=Mus musculus OX=10090 GN=Hnrnpa0 PE=1 SV=1 0 2 2 0.673 0 1 1 1 667.82471 1334.64214 1334.63989 1.68 0.00112 0/0 0 0 113455688 HCD 30 MS2 2.557015 497.9 21.337 35.5514 7969 7969 7966 QEplus033719.raw F4 512.1 502.3 518.1 337.4 682.4 435.4 74 4.19 1 FALSE 1.14E-05 3.25E-10 1.9 -250 23662 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVPDSER [R].aVPDSER.[V] N-Term(TMT6plex) 3 Q9CQR6 Serine/threonine-protein phosphatase 6 catalytic subunit OS=Mus musculus OX=10090 GN=Ppp6c PE=1 SV=1 Q9CQR6; Q9CVB2; A0A0N4SVL9 Serine/threonine-protein phosphatase 6 catalytic subunit OS=Mus musculus OX=10090 GN=Ppp6c PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ppp6c PE=2 SV=1; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp6c PE=1 SV=1 0 2 2 0.3319 0 1 1 1 501.77533 1002.54338 1002.54174 1.64 0.00082 0/0 0 0 19229550 HCD 30 MS2 45.20265 617.1 46.677 35.5536 7970 7970 7966 QEplus033719.raw F4 642 481.6 601.1 519.1 883.6 575.3 310 2.32 1 FALSE 0.001658 0.02745 0.23 -250 23671 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLAHADEAR [R].sLAHADEAR.[G] N-Term(TMT6plex) 14 A0A4Y5WWJ7 Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1 E9Q405; Q9JMH9-6; A0A1C7ZN10; E9QAX2; Q9JMH9-5; Q9JMH9-4; Q9JMH9-1; B2RRE2; A0A4Y5WWJ7; Q9JMH9-2; K3W4L0; Q9JMH9-7; Q9JMH9; E9QA74 Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 6 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 5 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Isoform 4 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Isoform 1 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Myo18a protein OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1; Isoform 2 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 7 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=2; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1 0 3 3 0.0612 0 1 1 1 400.2182 1198.64005 1198.63777 1.9 0.00076 0/0 0 0 12914866 HCD 30 MS2 53.35245 328.3 51.945 35.5559 7971 7971 7966 QEplus033719.raw F4 422.8 215.5 302.2 322.6 360 346.9 156 2.94 1 FALSE 0.000108 0.003075 0.556 -250 23680 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDPNTGR [K].mDPNTGR.[S] N-Term(TMT6plex) 5 Q544Z3 S1 protein D2 OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1 Q9D6G1; Q80XR6; Q544Z3; Q20BD0; Q3TMZ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; S1 protein D2 OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1 0 2 2 0.3103 0 1 1 1 510.26178 1019.51628 1019.51415 2.1 0.00107 0/0 0 0 12775268 HCD 30 MS2 20.49541 955.1 110 35.5584 7972 7972 7966 QEplus033719.raw F4 1104.1 840.7 886.3 682.1 1373 844.5 150 2.9 1 FALSE 7.59E-05 0.002813 0.565 -250 23715 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YHTVNGHNCEVR [K].yHTVNGHNcEVR.[K] N-Term(TMT6plex); C9(Carbamidomethyl) 9 Q3UK83 Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1 B7ZWG9; V9GXF8; Q3TFB1; Q3UK83; P49312; Q3U7F3; P49312-2; Q3TIK8; Q5EBP8 Hnrnpa1l2 protein OS=Mus musculus OX=10090 GN=Hnrnpa1l2 PE=2 SV=1; Predicted gene 5269 OS=Mus musculus OX=10090 GN=Gm5269 PE=1 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=2; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Isoform Short of Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=1 0 2 2 0.7526 0 1 1 1 857.92163 1714.83599 1714.8281 4.6 0.00394 0/0 0 0 1406888.375 HCD 30 MS2 0 48.9 110 35.5782 7979 7979 7977 QEplus033719.raw F4 57.5 52.7 46 39.7 57.8 39.6 136 3.8 1 FALSE 1.14E-05 3.36E-09 1.707 -250 23721 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTGAPDAGQE [R].qTGAPDAGQE.[-] N-Term(TMT6plex) 4 Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 Q3UJP4; E9Q133; F6ZVG8; Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; T-complex protein 1 subunit gamma (Fragment) OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 0 2 2 0.8495 0 1 1 1 601.79736 1202.58745 1202.58506 1.99 0.00119 0/0 0 0 74334368 HCD 30 MS2 2.688367 110.9 20.163 35.5805 7980 7980 7977 QEplus033719.raw F4 116.1 96.8 122.1 89.8 114.5 126.1 58 3.19 1 FALSE 1.14E-05 2.00E-05 0.99 -250 23726 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DPVQCSR [K].dPVQcSR.[D] N-Term(TMT6plex); C5(Carbamidomethyl) 6 Q99LX0 Parkinson disease protein 7 homolog OS=Mus musculus OX=10090 GN=Park7 PE=1 SV=1 A2A816; Q99LX0; A2A817; A2A815; D3K2X3; A2A813 "Parkinson disease protein 7 homolog (Fragment) OS=Mus musculus OX=10090 GN=Park7 PE=1 SV=1; Parkinson disease protein 7 homolog OS=Mus musculus OX=10090 GN=Park7 PE=1 SV=1; Parkinson disease protein 7 homolog (Fragment) OS=Mus musculus OX=10090 GN=Park7 PE=1 SV=1; Maillard deglycase (Fragment) OS=Mus musculus OX=10090 GN=Park7 PE=1 SV=8; Truncated DJ-1 variant SV4,5DEL OS=Mus musculus OX=10090 GN=Park7 PE=2 SV=1; Maillard deglycase OS=Mus musculus OX=10090 GN=Park7 PE=1 SV=1" 0 2 2 0.5366 0 1 1 1 545.78052 1090.55376 1090.55126 2.29 0.00125 0/0 0 0 56749144 HCD 30 MS2 18.54605 490 22.831 35.5827 7981 7981 7977 QEplus033719.raw F4 581.3 317.2 470.3 445.8 555.5 569.7 129 2.46 1 FALSE 0.0009075 0.01261 0.364 -250 23730 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGLGQSSER [K].dGLGQSSER.[E] N-Term(TMT6plex) 2 Q3UZ39 Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=2 Q3UZ39-3; Q3UZ39 Isoform 3 of Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1; Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=2 0 2 2 0.5363 0 1 1 1 589.30566 1177.60405 1177.60105 2.55 0.0015 0/0 0 0 22242838 HCD 30 MS2 18.37143 565.8 89.946 35.585 7982 7982 7977 QEplus033719.raw F4 573.9 584.5 573 311.2 875.4 476.6 157 2.89 1 FALSE 1.14E-05 4.49E-06 1.113 -250 23740 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASPDYER [K].aSPDYER.[I] N-Term(TMT6plex) 9 Q8C3C9 Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a2 PE=2 SV=1 Q8C3C9; B1AV77; Q99PH3; P47740; Q3U7B5; B1ATI0; Q99PH4; Q8BQ93; Q8C5J1 Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a2 PE=2 SV=1; Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a2 PE=1 SV=1; Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a2 PE=3 SV=1; Aldehyde dehydrogenase family 3 member A2 OS=Mus musculus OX=10090 GN=Aldh3a2 PE=1 SV=2; Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a2 PE=2 SV=1; Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a2 PE=1 SV=1; Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a2 PE=3 SV=1; Aldehyde dehydrogenase OS=Mus musculus OX=10090 PE=2 SV=1; Aldehyde dehydrogenase OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.4262 0 1 1 1 533.7749 1066.54253 1066.53665 5.51 0.00294 0/0 0 0 19593628 HCD 30 MS2 25.65408 653.4 45.192 35.5873 7983 7983 7977 QEplus033719.raw F4 638.7 625.7 732 545.4 716.7 662.1 153 2.37 1 FALSE 0.007576 0.1239 -0.049 -250 23747 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPVCANR [R].nPVcANR.[K] N-Term(TMT6plex); C4(Carbamidomethyl) 3 Q3ULG5 DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1 Q3ULG5; Q3UC10; P97311 DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=2 SV=1; DNA replication licensing factor MCM6 OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1 0 2 2 0.5333 0 1 1 1 530.28284 1059.5584 1059.55668 1.62 0.00086 0/0 0 0 13548307 HCD 30 MS2 35.61512 660.5 110 35.5898 7984 7984 7977 QEplus033719.raw F4 636 685.7 624.8 458.4 1023.5 534.7 147 2.1 1 FALSE 0.0005076 0.007987 0.439 -250 23770 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEQEEYAR [R].tEQEEYAR.[Q] N-Term(TMT6plex) 3 Q3UQ84 "Threonine--tRNA ligase, mitochondrial OS=Mus musculus OX=10090 GN=Tars2 PE=1 SV=1" Q3UQ84; E9Q7H6; Q922A3 "Threonine--tRNA ligase, mitochondrial OS=Mus musculus OX=10090 GN=Tars2 PE=1 SV=1; Threonyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Tars2 PE=1 SV=1; Threonyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Tars2 PE=1 SV=1" 0 2 2 0.6029 0 1 1 1 627.81323 1254.61919 1254.61636 2.25 0.00141 0/0 0 0 3689740 HCD 30 MS2 0 192.1 110 35.5973 7987 7987 7977 QEplus033719.raw F4 216.4 157.5 200.2 192.3 198.9 187.5 81 3.45 1 FALSE 1.14E-05 3.99E-05 0.933 -250 23777 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEGEIAR [K].sEGEIAR.[C] N-Term(TMT6plex) 7 Q3UPA3 Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1 Q3UUX9; Q3UPA3; Q3TIY6; Q61598-2; Q3UC72; A0A1Y7VL99; Q61598 Rab GDP dissociation inhibitor OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Rab GDP dissociation inhibitor OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Isoform 2 of Rab GDP dissociation inhibitor beta OS=Mus musculus OX=10090 GN=Gdi2; Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Mus musculus OX=10090 GN=Gdi2 PE=1 SV=1 0 2 2 0.1143 0 1 1 1 495.77271 990.53813 990.54174 -3.64 -0.0018 0/0 0 0 17992450 HCD 30 MS2 46.517 546.4 30.139 35.6046 7989 7989 7988 QEplus033719.raw F4 659.3 362.1 544.3 592.1 586.6 534.2 248 1.75 1 FALSE 0.00439 0.07935 0.063 -250 23785 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPGPSGPQPR [R].nPGPSGPQPR.[D] N-Term(TMT6plex) 3 Q3TDG9 t-SNARE coiled-coil homology domain-containing protein OS=Mus musculus OX=10090 GN=Stx12 PE=2 SV=1 Q3TDG9; Q9ER00; Q3TIL5 t-SNARE coiled-coil homology domain-containing protein OS=Mus musculus OX=10090 GN=Stx12 PE=2 SV=1; Syntaxin-12 OS=Mus musculus OX=10090 GN=Stx12 PE=1 SV=1; t-SNARE coiled-coil homology domain-containing protein OS=Mus musculus OX=10090 GN=Stx12 PE=2 SV=1 0 2 2 0.7956 0 1 1 1 618.34015 1235.67302 1235.6694 2.93 0.00181 0/0 0 0 5011855 HCD 30 MS2 9.328144 206.6 110 35.6071 7990 7990 7988 QEplus033719.raw F4 215.9 168 225.6 162.7 220.4 247 307 2.74 1 FALSE 2.26E-05 0.001111 0.653 -250 23787 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENQEVVR [K].eNQEVVR.[S] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.4867 0 1 1 1 551.8075 1102.60771 1102.6054 2.1 0.00116 0/0 0 0 56808392 HCD 30 MS2 8.674223 590.1 26.221 35.6093 7991 7991 7988 QEplus033719.raw F4 669 373.7 671.5 562.8 496.9 766.8 281 2.63 1 FALSE 0.0002909 0.006018 0.478 -250 23799 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGNIGDGGGAADR [R].gGNIGDGGGAADR.[V] N-Term(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 0 3 3 0.7356 0 1 1 1 449.22729 1345.66733 1345.66577 1.16 0.00052 0/0 0 0 13325382 HCD 30 MS2 55.51765 335.6 65.679 35.6206 7996 7996 7988 QEplus033719.raw F4 453.4 262.2 351.3 271.6 329.1 346 117 4.35 1 FALSE 1.14E-05 1.88E-07 1.375 -250 23820 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYSDRDGYGR [R].gYSDRDGYGR.[D] N-Term(TMT6plex) 4 Q9WV02 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1" A2AFI3; Q9WV02-2; Q9WV02; S4R1F6 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; Isoform 2 of RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1" 1 3 3 0.4239 0 1 1 1 458.89224 1374.66217 1374.65996 1.61 0.00074 0/0 0 0 10434635 HCD 30 MS2 45.33869 832.8 110 35.6327 8000 8000 7999 QEplus033719.raw F4 931.3 709.1 873.7 637.8 1022.8 821.9 71 2.76 1 FALSE 0.0006294 0.009662 0.41 -250 23826 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HAVSEGTK [K].hAVSEGTk.[A] N-Term(TMT6plex); K8(TMT6plex) 17 Q64475; Q64525 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3;Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64475; Q8CGP2; Q64525; Q64524; Q8CGP1; P10854; A0JNS9; Q64478; P70696; Q9D2U9; Q8CGP2-2; Q8CBB6; Q6ZWY9; Q8CGP0; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 2-E OS=Mus musculus OX=10090 GN=H2bc21 PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Histone H2B type 3-A OS=Mus musculus OX=10090 GN=Hist3h2ba PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3; Histone H2B type 3-B OS=Mus musculus OX=10090 GN=H2bu1 PE=1 SV=3; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 0 2 2 0.6121 0 1 1 1 643.87811 1286.74895 1286.74687 1.61 0.00104 0/0 0 0 16668633 HCD 30 MS2 7.970639 627.8 110 35.6352 8001 8001 7999 QEplus033719.raw F4 2089 365.9 454.4 245.9 226.3 385.5 395 2.81 2 FALSE 1.14E-05 0.0001275 0.837 -250 23842 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HAVSEGTK [K].hAVSEGTk.[A] N-Term(TMT6plex); K8(TMT6plex) 17 Q64475; Q64525 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3;Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64475; Q8CGP2; Q64525; Q64524; Q8CGP1; P10854; A0JNS9; Q64478; P70696; Q9D2U9; Q8CGP2-2; Q8CBB6; Q6ZWY9; Q8CGP0; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 2-E OS=Mus musculus OX=10090 GN=H2bc21 PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Histone H2B type 3-A OS=Mus musculus OX=10090 GN=Hist3h2ba PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3; Histone H2B type 3-B OS=Mus musculus OX=10090 GN=H2bu1 PE=1 SV=3; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 0 3 3 0.5812 0 1 1 1 429.58762 1286.74829 1286.74687 1.11 0.00047 0/0 0 0 111101944 HCD 30 MS2 33.6999 527.4 12.521 35.6397 8003 8003 7999 QEplus033719.raw F4 1679.1 287.1 391.1 246.6 212.1 348.2 397 3.82 2 FALSE 1.14E-05 9.05E-05 0.865 -250 23865 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRAEASLER [R].nRAEASLER.[A] N-Term(TMT6plex) 2 Q9R1T2 SUMO-activating enzyme subunit 1 OS=Mus musculus OX=10090 GN=Sae1 PE=1 SV=1 Q9R1T2; Q9R1T2-2 SUMO-activating enzyme subunit 1 OS=Mus musculus OX=10090 GN=Sae1 PE=1 SV=1; Isoform 2 of SUMO-activating enzyme subunit 1 OS=Mus musculus OX=10090 GN=Sae1 1 3 3 0.4085 0 1 1 1 425.57236 1274.70252 1274.70143 0.86 0.00036 0/0 0 0 36253312 HCD 30 MS2 35.8586 393.1 27.841 35.6465 8006 8006 7999 QEplus033719.raw F4 402.7 339.5 442.7 278.8 524.4 370.5 333 4.26 1 FALSE 1.14E-05 0.0002239 0.79 -250 23880 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEGSCPAR [K].mEGScPAR.[W] N-Term(TMT6plex); C5(Carbamidomethyl) 2 Q62351 Transferrin receptor protein 1 OS=Mus musculus OX=10090 GN=Tfrc PE=1 SV=1 Q8C872; Q62351 Transferrin receptor protein 1 OS=Mus musculus OX=10090 GN=Tfrc PE=1 SV=1; Transferrin receptor protein 1 OS=Mus musculus OX=10090 GN=Tfrc PE=1 SV=1 0 2 2 0.6346 0 1 1 1 568.77374 1136.54021 1136.53898 1.08 0.00061 0/0 0 0 20003966 HCD 30 MS2 4.219635 697 110 35.6608 8011 8011 8010 QEplus033719.raw F4 807.6 377 614.5 1009.6 493.5 879.9 46 2.6 1 FALSE 1.14E-05 0.0008324 0.678 -250 23886 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETEGFRR [K].eTEGFRR.[F] N-Term(TMT6plex) 5 Q3UE11 Procollagen-lysine 5-dioxygenase OS=Mus musculus OX=10090 PE=2 SV=1 Q3UE11; Q3TZN4; A8Y5E6; Q9R0E2; Q3V2R7 "Procollagen-lysine 5-dioxygenase OS=Mus musculus OX=10090 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Plod1 PE=2 SV=1; Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Mus musculus OX=10090 GN=Plod1 PE=1 SV=1; Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Mus musculus OX=10090 GN=Plod1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Plod1 PE=2 SV=1" 1 2 2 0.2488 0 1 1 1 562.30573 1123.60417 1123.60574 -1.39 -0.00078 0/0 0 0 4161067 HCD 30 MS2 33.1748 382.1 110 35.6633 8012 8012 8010 QEplus033719.raw F4 410.5 335 414.9 297.9 462.4 371.7 240 2.13 1 FALSE 0.006298 0.1024 0 -250 23890 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTSLETRR [K].dTSLETRR.[H] N-Term(TMT6plex) 1 Q9CWJ9 Bifunctional purine biosynthesis protein ATIC OS=Mus musculus OX=10090 GN=Atic PE=1 SV=2 Q9CWJ9 Bifunctional purine biosynthesis protein ATIC OS=Mus musculus OX=10090 GN=Atic PE=1 SV=2 1 3 3 0.4295 0 1 1 1 402.8931 1206.66474 1206.66398 0.63 0.00025 0/0 0 0 41946644 HCD 30 MS2 44.20679 443.4 22.211 35.6655 8013 8013 8010 QEplus033719.raw F4 569.3 364.2 488.5 344.6 461.5 432 355 2.98 1 FALSE 1.14E-05 0.0004813 0.725 -250 23905 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQAAVPR [K].gQAAVPR.[K] N-Term(TMT6plex) 2 A0A0G2JFH2 Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 A0A0G2JFH2; Q60638 Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=2 SV=1 0 2 2 0.2476 0 1 1 1 464.28293 927.55858 927.55733 1.35 0.00062 0/0 0 0 25808808 HCD 30 MS2 39.6814 638.7 53.114 35.67 8015 8015 8010 QEplus033719.raw F4 755.8 206.7 606.9 1003.8 295.4 963.7 36 2.1 1 FALSE 0.001607 0.02569 0.24 -250 23942 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLQEEDR [R].qLQEEDR.[G] N-Term(TMT6plex) 1 Q3UMR5 "Calcium uniporter protein, mitochondrial OS=Mus musculus OX=10090 GN=Mcu PE=1 SV=2" Q3UMR5 "Calcium uniporter protein, mitochondrial OS=Mus musculus OX=10090 GN=Mcu PE=1 SV=2" 0 2 2 0.2034 0 1 1 1 573.80188 1146.59648 1146.59523 1.09 0.00063 0/0 0 0 9231650 HCD 30 MS2 45.42992 407.7 110 35.6821 8020 8020 8010 QEplus033719.raw F4 414.9 236 384.5 572.6 311.1 526.9 206 2.95 1 FALSE 5.44E-05 0.001947 0.601 -250 23950 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRAEASLER [R].nRAEASLER.[A] N-Term(TMT6plex) 2 Q9R1T2 SUMO-activating enzyme subunit 1 OS=Mus musculus OX=10090 GN=Sae1 PE=1 SV=1 Q9R1T2; Q9R1T2-2 SUMO-activating enzyme subunit 1 OS=Mus musculus OX=10090 GN=Sae1 PE=1 SV=1; Isoform 2 of SUMO-activating enzyme subunit 1 OS=Mus musculus OX=10090 GN=Sae1 1 2 2 0.5744 0 1 1 1 637.85681 1274.70635 1274.70143 3.86 0.00246 0/0 0 0 5829140.5 HCD 30 MS2 4.79758 163.2 110 35.6894 8022 8022 8021 QEplus033719.raw F4 162.6 148.1 177.2 133.6 190.3 167.6 317 2.89 1 FALSE 0.0006126 0.009042 0.42 -250 23955 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGVEAK [K].hGVEAk.[N] N-Term(TMT6plex); K6(TMT6plex) 3 Q9D1D4 Transmembrane emp24 domain-containing protein 10 OS=Mus musculus OX=10090 GN=Tmed10 PE=1 SV=1 Q9D1D4; A0A1Y7VM54; Q9D1D4-2 Transmembrane emp24 domain-containing protein 10 OS=Mus musculus OX=10090 GN=Tmed10 PE=1 SV=1; Transmembrane emp24 domain-containing protein 10 OS=Mus musculus OX=10090 GN=Tmed10 PE=1 SV=1; Isoform 2 of Transmembrane emp24 domain-containing protein 10 OS=Mus musculus OX=10090 GN=Tmed10 0 3 3 0.1736 0 1 1 1 366.89444 1098.66877 1098.66716 1.46 0.00053 0/0 0 0 5008823.5 HCD 30 MS2 66.19938 484.2 110 35.6919 8023 8023 8021 QEplus033719.raw F4 1107.1 260.5 441.5 279.3 363.8 453.1 113 2.88 1 FALSE 0.0003803 0.006966 0.459 -250 23964 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RACCFAR [R].rAccFAR.[V] N-Term(TMT6plex); C3(Carbamidomethyl); C4(Carbamidomethyl) 1 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 1 3 3 0.6614 0 1 1 1 390.53436 1169.58854 1169.58693 1.37 0.00053 0/0 0 0 82753544 HCD 30 MS2 36.9035 473.6 11.41 35.6964 8025 8025 8021 QEplus033719.raw F4 710.3 239.3 449.5 627.7 206.9 607.8 98 3.16 1 FALSE 0.001074 0.01392 0.346 -250 23980 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MHVEQER [R].mHVEQER.[R] N-Term(TMT6plex) 2 D3YXK2 Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=2 D3YXK2; S4R1M2 Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=2; Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=1 0 3 3 0.6396 0 1 1 1 386.5365 1157.59494 1157.59346 1.28 0.0005 0/0 0 0 42474784 HCD 30 MS2 17.91729 206.6 22.147 35.7031 8028 8028 8021 QEplus033719.raw F4 211.1 158.1 228.8 141.6 271.8 227.9 101 3.33 1 FALSE 5.44E-05 0.002161 0.591 -250 23986 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AASGALR [K].aASGALR.[N] N-Term(TMT6plex) 20 P30999 Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2 D3Z2H7; P30999-2; E9Q906; Q3TPD1; E9Q905; D3Z2H2; P30999; E9Q8Z9; G3X9V2; E9Q903; E9Q986; E9Q8Z8; E9Q901; E9Q8Z6; P30999-3; E9Q904; E9Q8Z5; E9Q8Z4; D3Z7H6; E9Q907 Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Isoform 2 of Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Isoform 3 of Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1 0 2 2 0.1694 0 1 1 1 437.76932 874.53136 874.53078 0.66 0.00029 0/0 0 0 31039300 HCD 30 MS2 16.48369 653.2 47.858 35.7054 8029 8029 8021 QEplus033719.raw F4 785 567.1 769.4 522.1 730.2 545.4 67 2.42 1 FALSE 0.001359 0.01931 0.287 -250 24005 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RACCFAR [R].rAccFAR.[V] N-Term(TMT6plex); C3(Carbamidomethyl); C4(Carbamidomethyl) 1 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 1 2 2 0.4881 0 1 1 1 585.29706 1169.58684 1169.58693 -0.08 -0.00005 0/0 0 0 14394959 HCD 30 MS2 12.89193 390.9 110 35.7197 8034 8034 8032 QEplus033719.raw F4 511.3 146.8 332.6 605.4 163.5 585.8 95 1.68 1 FALSE 0.008074 0.135 -0.067 -250 24010 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TRDFTSSR [K].tRDFTSSR.[M] N-Term(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 2 2 0.4308 0 1 1 1 599.8233 1198.63933 1198.63777 1.31 0.00078 0/0 0 0 65516456 HCD 30 MS2 3.299006 213.4 25.922 35.722 8035 8035 8032 QEplus033719.raw F4 263.2 33.8 164.8 414.5 32.5 371.6 160 1.95 1 FALSE 0.001719 0.02886 0.222 -250 24025 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGMTHIVR [K].aGmTHIVR.[E] N-Term(TMT6plex); M3(Oxidation) 7 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB15; Q3UB90; Q3U9L3; A0A087WQK0; P27659; A0A087WNS0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 (Fragment) OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=1 0 3 3 0.3816 0 1 1 1 377.21741 1129.63767 1129.63493 2.42 0.00091 0/0 0 0 22096618 HCD 30 MS2 32.78929 247.9 43.17 35.7265 8037 8037 8032 QEplus033719.raw F4 335.6 173.1 249.7 209 284 236.1 241 2.83 1 FALSE 0.0001707 0.003903 0.53 -250 24030 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLGHHIGAR [K].qLGHHIGAR.[NGA] N-Term(TMT6plex) 7 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; Q62411; F6RDH3; Q62412; A0A571BF46; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=1 SV=8; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 3 3 0.6608 0 1 1 1 406.57373 1217.70664 1217.70645 0.15 0.00006 0/0 0 0 18638498 HCD 30 MS2 33.2292 351.1 54.115 35.7287 8038 8038 8032 QEplus033719.raw F4 411.8 173.4 331.7 446.6 263.8 479.3 373 3.95 1 FALSE 1.14E-05 4.99E-06 1.105 -250 24038 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTENARPSGEK [K].qTENARPSGEk.[E] N-Term(TMT6plex); K11(TMT6plex) 5 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q8CD09; Q9ERG0; Q8C7S2; Q8C3R7; Q8BT15 LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 0 3 3 0.6028 0 1 1 1 558.97803 1674.91953 1674.91752 1.2 0.00067 0/0 0 0 13323775 HCD 30 MS2 5.820693 646 110 35.7312 8039 8039 8032 QEplus033719.raw F4 915.6 451.7 857.1 458.5 614.9 578.2 384 2.82 1 FALSE 1.14E-05 7.77E-07 1.258 -250 24044 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GETGLRGDTGNTGR [K].gETGLRGDTGNTGR.[D] N-Term(TMT6plex) 4 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 1 3 3 0.4944 0 1 1 1 540.6156 1619.83225 1619.82988 1.46 0.00079 0/0 0 0 12448778 HCD 30 MS2 0 486.6 110 35.7337 8040 8040 8032 QEplus033719.raw F4 513.6 418.4 512.5 450.4 576.8 447.7 231 3.56 1 FALSE 1.14E-05 3.02E-06 1.146 -250 24051 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVQPTSEER [K].sVQPTSEER.[I] N-Term(TMT6plex) 6 Q80UG5 Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 A2A6U5; Q80UG5-3; Q80UG5; A2A6U3; Q80UG5-2; Q3TDR9 Septin-9 (Fragment) OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Isoform 3 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Isoform 2 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-type G domain-containing protein OS=Mus musculus OX=10090 GN=Septin9 PE=2 SV=1 0 2 2 0.5797 0 1 1 1 631.33398 1261.66069 1261.65856 1.69 0.00107 0/0 0 0 9996231 HCD 30 MS2 16.77409 399 110 35.7363 8041 8041 8032 QEplus033719.raw F4 404.3 409.6 468.2 288.2 439.1 384.5 196 3.45 1 FALSE 1.14E-05 1.18E-06 1.223 -250 24064 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHVQPIR [R].gHVQPIR.[C] N-Term(TMT6plex) 1 Q497N1 40S ribosomal protein S26 OS=Mus musculus OX=10090 GN=Rps26 PE=1 SV=1 Q497N1 40S ribosomal protein S26 OS=Mus musculus OX=10090 GN=Rps26 PE=1 SV=1 0 2 2 0.2811 0 1 1 1 518.31763 1035.62798 1035.62608 1.83 0.00095 0/0 0 0 23071620 HCD 30 MS2 36.28064 663.9 60.826 35.746 8044 8044 8043 QEplus033719.raw F4 719 503.8 643.4 591.2 821.6 704.2 95 2.17 1 FALSE 0.001615 0.02606 0.238 -250 24082 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNPAMTR [R].dNPAMTR.[G] N-Term(TMT6plex) 6 Q8C2D1 "Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1" Q3U890; Q8C2D1; Q61035; Q8VDX8; Q3UDH1; Q9D094 "Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars1 PE=1 SV=2; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1" 0 2 2 0.4378 0 1 1 1 517.26929 1033.5313 1033.5298 1.45 0.00075 0/0 0 0 26663278 HCD 30 MS2 29.63553 649.6 66.349 35.7508 8046 8046 8043 QEplus033719.raw F4 1024 466.9 618.1 503.8 663.8 621.3 168 2.17 1 FALSE 0.0006035 0.008985 0.421 -250 24092 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HAVVVGR [R].hAVVVGR.[S] N-Term(TMT6plex) 5 Q3TW74 "C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1" Q8BY49; Q8BXX7; Q3UZH3; Q3TW74; Q922D8 "Methenyltetrahydrofolate cyclohydrolase (Fragment) OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=2; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=1 SV=4" 0 2 2 0.5533 0 1 1 1 483.80655 966.60582 966.60462 1.25 0.0006 0/0 0 0 10810401 HCD 30 MS2 33.54365 697.8 110 35.7533 8047 8047 8043 QEplus033719.raw F4 702.8 566.2 754.4 540.2 915.1 707.9 35 2.44 1 FALSE 0.0006126 0.009063 0.42 -250 24099 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGPEGNDIRR [K].eGPEGNDIRR.[T] N-Term(TMT6plex) 2 A2AE27 AMP deaminase OS=Mus musculus OX=10090 GN=Ampd2 PE=1 SV=1 A2AE27; Q9DBT5 AMP deaminase OS=Mus musculus OX=10090 GN=Ampd2 PE=1 SV=1; AMP deaminase 2 OS=Mus musculus OX=10090 GN=Ampd2 PE=1 SV=1 1 3 3 0.4605 0 1 1 1 457.91138 1371.71958 1371.71781 1.29 0.00059 0/0 0 0 9458977 HCD 30 MS2 28.87018 470 110 35.7558 8048 8048 8043 QEplus033719.raw F4 527.4 372.1 493.4 344.7 583.1 499.3 200 3.8 1 FALSE 1.14E-05 4.45E-09 1.684 -250 24107 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTASPSVR [K].tTASPSVR.[L] N-Term(TMT6plex) 2 A2AWA9 Rab GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Rabgap1 PE=1 SV=1 A2AWA9; A2AWA9-2 Rab GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Rabgap1 PE=1 SV=1; Isoform 2 of Rab GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Rabgap1 0 2 2 0.397 0 1 1 1 524.30402 1047.60076 1047.59959 1.11 0.00058 0/0 0 0 8823254 HCD 30 MS2 28.13732 572.3 110 35.7583 8049 8049 8043 QEplus033719.raw F4 618.1 468.2 607.3 473.2 653.4 613.4 247 2.67 1 FALSE 0.0008183 0.0113 0.384 -250 24135 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDTDSDTQDANDSSCK [R].rDTDSDTQDANDSSck.[S] N-Term(TMT6plex); C15(Carbamidomethyl); K16(TMT6plex) 11 B1AZP2 Disks large-associated protein 4 OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1 B1AZP2-3; I1E4X0; E9PUF2; F6YMR0; B1AZP2; B7ZNS2; Q3UCF7; B1AZP2-2; H3BL90; H3BKJ0; H3BJW9 Isoform 3 of Disks large-associated protein 4 OS=Mus musculus OX=10090 GN=Dlgap4; Disks large-associated protein 4 OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1; Disks large-associated protein 4 OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1; Disks large-associated protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=2; Disks large-associated protein 4 OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1; Disks large-associated protein 4 OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Dlgap4 PE=2 SV=1; Isoform 2 of Disks large-associated protein 4 OS=Mus musculus OX=10090 GN=Dlgap4; Disks large-associated protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1; Disks large-associated protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1; Disks large-associated protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1 1 3 3 0.7851 0 1 1 1 758.35077 2273.03775 2273.0352 1.12 0.00085 0/0 0 0 4587445 HCD 30 MS2 16.30841 94 110 35.7658 8052 8052 8043 QEplus033719.raw F4 88.4 55.2 122.5 98.7 54.2 145.1 45 6.05 1 FALSE 1.14E-05 6.31E-16 3.45 -250 24140 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVDNPPR [K].aVDNPPR.[G] N-Term(TMT6plex) 1 Q9D706 RNA polymerase II-associated protein 3 OS=Mus musculus OX=10090 GN=Rpap3 PE=1 SV=1 Q9D706 RNA polymerase II-associated protein 3 OS=Mus musculus OX=10090 GN=Rpap3 PE=1 SV=1 0 2 2 0.1459 0 1 1 1 499.28577 997.56426 997.56281 1.45 0.00072 0/0 0 0 6504730 HCD 30 MS2 33.61156 536.6 110 35.7683 8053 8053 8043 QEplus033719.raw F4 540.6 507 591.1 471.9 561.2 548 120 2.33 1 FALSE 0.0005076 0.008054 0.438 -250 24167 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEERPTQNEK [K].gEERPTQNEk.[R] N-Term(TMT6plex); K10(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; A0A3Q4EH91; Q9D0E1-2; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 3 3 0.5747 0 1 1 1 549.30286 1645.89402 1645.89097 1.85 0.00102 0/0 0 0 61885396 HCD 30 MS2 3.145595 692.1 30.79 35.7803 8057 8057 8054 QEplus033719.raw F4 830.7 622.3 744.2 634.4 776.6 544.4 395 2.61 1 FALSE 1.14E-05 3.08E-05 0.955 -250 24186 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEIEQER [K].gEIEQER.[LI] N-Term(TMT6plex) 10 G5E829 Plasma membrane calcium-transporting ATPase 1 OS=Mus musculus OX=10090 GN=Atp2b1 PE=1 SV=1 Q0VF54; Q0VF55; Q8K314; Q3UHH0; A2ALL9; G5E829; F8WHB1; Q3UHJ3; S4R1C4; Q8C048 Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b3 PE=2 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b3 PE=1 SV=1; Atp2b1 protein (Fragment) OS=Mus musculus OX=10090 GN=Atp2b1 PE=2 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b2 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b3 PE=1 SV=1; Plasma membrane calcium-transporting ATPase 1 OS=Mus musculus OX=10090 GN=Atp2b1 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b2 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b2 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b2 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b3 PE=1 SV=1 0 2 2 0.0736 0 1 1 1 545.29102 1089.57475 1089.57377 0.91 0.00049 0/0 0 0 22000174 HCD 30 MS2 15.04001 637 76.648 35.7871 8060 8060 8054 QEplus033719.raw F4 594.7 524.6 739.8 656.1 582.7 723.9 215 2.58 1 FALSE 0.0002909 0.005898 0.481 -250 24203 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEDNIR [K].eAEDNIR.[ER] N-Term(TMT6plex) 4 Q9CQF7 Prefoldin 1 OS=Mus musculus OX=10090 GN=Pfdn1 PE=1 SV=1 A0A494BAH5; Q9CQF7; Q8R3R9; Q9CWM4 Prefoldin subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Pfdn1 PE=1 SV=1; Prefoldin 1 OS=Mus musculus OX=10090 GN=Pfdn1 PE=1 SV=1; Prefoldin 1 OS=Mus musculus OX=10090 GN=Pfdn1 PE=2 SV=1; Prefoldin subunit 1 OS=Mus musculus OX=10090 GN=Pfdn1 PE=1 SV=1 0 2 2 0.4672 0 1 1 1 538.28351 1075.55974 1075.55812 1.51 0.00081 0/0 0 0 9534710 HCD 30 MS2 39.88691 958 110 35.7943 8063 8063 8054 QEplus033719.raw F4 1021.2 818.9 975.3 833.1 1081.2 1018.5 216 2.59 1 FALSE 0.0001603 0.003772 0.534 -250 24204 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEDNLR [K].eAEDNLR.[ER] N-Term(TMT6plex) 6 A0A498WGK2 Asparagine--tRNA ligase OS=Mus musculus OX=10090 GN=Nars PE=1 SV=1 A0A498WGK2; A0A494B996; Q8BP47; A0A494BB89; A0A494BAW6; A0A494B927 "Asparagine--tRNA ligase OS=Mus musculus OX=10090 GN=Nars PE=1 SV=1; Asparaginyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Nars PE=1 SV=1; Asparagine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=NARS1 PE=1 SV=2; Asparaginyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Nars PE=1 SV=1; Asparaginyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Nars PE=1 SV=1; Asparaginyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Nars PE=1 SV=1" 0 2 2 0.4672 0 1 2 2 538.28351 1075.55974 1075.55812 1.51 0.00081 0/0 0 0 9534710 HCD 30 MS2 39.88691 958 110 35.7943 8063 8063 8054 QEplus033719.raw F4 1021.2 818.9 975.3 833.1 1081.2 1018.5 216 2.59 1 FALSE 0.0001603 0.003772 0.534 -250 24212 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEFEHSETR [K].gEFEHSETR.[E] N-Term(TMT6plex) 4 Q3ULB0 RNA-binding motif protein 6 OS=Mus musculus OX=10090 GN=Rbm6 PE=1 SV=1 Q3ULB0; Q5DTS4; O88720; S4R1W5 RNA-binding motif protein 6 OS=Mus musculus OX=10090 GN=Rbm6 PE=1 SV=1; MKIAA4015 protein (Fragment) OS=Mus musculus OX=10090 GN=Rbm6 PE=2 SV=1; RNA binding protein OS=Mus musculus OX=10090 GN=Rbm6 PE=2 SV=2; RNA-binding motif protein 6 OS=Mus musculus OX=10090 GN=Rbm6 PE=1 SV=1 0 3 3 0.5016 0 1 1 1 440.88516 1320.64093 1320.63816 2.1 0.00092 0/0 0 0 4178289.25 HCD 30 MS2 64.18993 478.7 110 35.7968 8064 8064 8054 QEplus033719.raw F4 583 353.2 442.8 436 619.4 437.9 88 3.07 1 FALSE 4.43E-05 0.001419 0.631 -250 24228 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NGPPPCPR [K].nGPPPcPR.[L] N-Term(TMT6plex); C6(Carbamidomethyl) 3 Q61191 Host cell factor 1 OS=Mus musculus OX=10090 GN=Hcfc1 PE=1 SV=2 Q3USQ6; Q61191; B1AUX2 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hcfc1 PE=2 SV=1; Host cell factor 1 OS=Mus musculus OX=10090 GN=Hcfc1 PE=1 SV=2; Host cell factor 1 OS=Mus musculus OX=10090 GN=Hcfc1 PE=1 SV=1 0 2 2 0.6125 0 1 1 1 562.30084 1123.59441 1123.58798 5.72 0.00321 0/0 0 0 4673959.5 HCD 30 MS2 48.4993 421.5 110 35.8066 8067 8067 8065 QEplus033719.raw F4 497.6 360.8 447.6 331.9 490.4 400.8 161 2.4 1 FALSE 0.001177 0.01582 0.323 -250 24236 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGNIGDGGGAADR [R].gGNIGDGGGAADR.[V] N-Term(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 0 3 3 0.6913 0 1 1 1 449.22501 1345.66047 1345.66577 -3.94 -0.00177 0/0 0 0 32388838 HCD 30 MS2 49.73561 368.8 32.82 35.8089 8068 8068 8065 QEplus033719.raw F4 372.5 373.1 418.4 250.3 457.6 340.9 83 4.47 1 FALSE 1.14E-05 2.94E-06 1.148 -250 24244 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDNTFR [K].gDNTFR.[C] N-Term(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.4724 0 1 1 1 469.74939 938.4915 938.48931 2.34 0.0011 0/0 0 0 21364286 HCD 30 MS2 10.46751 709.4 58.394 35.8112 8069 8069 8065 QEplus033719.raw F4 1037.5 261.6 612.1 924 551.1 870.4 55 1.99 1 FALSE 0.00459 0.08137 0.058 -250 24254 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GETGLRGDTGNTGR [K].gETGLRGDTGNTGR.[D] N-Term(TMT6plex) 4 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 1 2 2 0.3056 0 1 1 1 810.41809 1619.82891 1619.82988 -0.6 -0.00049 0/0 0 0 8845276 HCD 30 MS2 0 73.2 110 35.8159 8071 8071 8065 QEplus033719.raw F4 71.1 56.9 79.7 67.5 87.4 76.8 227 2.52 1 FALSE 1.14E-05 2.01E-09 1.75 -250 24271 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSQITQQSTNQSR [K].gSQITQQSTNQSR.[N] N-Term(TMT6plex) 3 Q99J95 Cyclin-dependent kinase 9 OS=Mus musculus OX=10090 GN=Cdk9 PE=1 SV=1 Q99J95-3; Q99J95; Q99J95-2 Isoform 3 of Cyclin-dependent kinase 9 OS=Mus musculus OX=10090 GN=Cdk9; Cyclin-dependent kinase 9 OS=Mus musculus OX=10090 GN=Cdk9 PE=1 SV=1; Isoform 2 of Cyclin-dependent kinase 9 OS=Mus musculus OX=10090 GN=Cdk9 0 2 2 0.628 0 1 1 1 832.42609 1663.8449 1663.85609 -6.73 -0.0056 0/0 0 0 5651674.5 HCD 30 MS2 17.26106 151.5 110 35.8235 8074 8074 8065 QEplus033719.raw F4 145.8 133.2 167.1 124.8 201.4 136.6 204 2.5 1 FALSE 1.14E-05 8.29E-11 2.012 -250 24279 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNVNDGVAQSTR [K].sNVNDGVAQSTR.[I] N-Term(TMT6plex) 3 P17751 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5 H7BXC3; P17751; P17751-2 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=1; Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5; Isoform 2 of Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 0 2 2 0.7548 0 1 1 1 738.88391 1476.76055 1476.7604 0.1 0.00007 0/0 0 0 5387949 HCD 30 MS2 20.16528 148 110 35.826 8075 8075 8065 QEplus033719.raw F4 156.7 101.6 140.6 177.2 124.2 187.9 213 5.22 1 FALSE 1.14E-05 1.09E-11 2.18 -250 24287 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHYDGIR [R].sHYDGIR.[S] N-Term(TMT6plex) 3 P58404 Striatin-4 OS=Mus musculus OX=10090 GN=Strn4 PE=1 SV=2 P58404; Q3U3S0; P58404-2 Striatin-4 OS=Mus musculus OX=10090 GN=Strn4 PE=1 SV=2; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Strn4 PE=2 SV=1; Isoform 2 of Striatin-4 OS=Mus musculus OX=10090 GN=Strn4 0 3 3 0.5096 0 1 1 1 359.52798 1076.5694 1076.56862 0.72 0.00026 0/0 0 0 5524876 HCD 30 MS2 63.12919 605.1 110 35.8333 8077 8077 8076 QEplus033719.raw F4 890.7 301.9 659.7 501.5 667.5 609.6 253 2.61 1 FALSE 0.001335 0.01867 0.293 -250 24295 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTSCPGCR [K].vTScPGcR.[K] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl) 2 Q8VE19 GATOR complex protein MIOS OS=Mus musculus OX=10090 GN=Mios PE=1 SV=2 Q8VE19; Q8BV62 GATOR complex protein MIOS OS=Mus musculus OX=10090 GN=Mios PE=1 SV=2; zinc_ribbon_16 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Mios PE=2 SV=1 0 2 2 0.6798 0 1 1 1 583.28613 1165.56499 1165.56553 -0.46 -0.00027 0/0 0 0 2729317.25 HCD 30 MS2 26.63596 269.8 110 35.8358 8078 8078 8076 QEplus033719.raw F4 308.2 207.3 292 248.6 294.5 267.9 74 2.28 1 FALSE 0.003182 0.06252 0.107 -250 24303 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGNYSER [R].kGNYSER.[V] N-Term(TMT6plex); K1(TMT6plex) 6 Q8BFU2 Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3 Q8BFU2; C0HKE5; Q8CGP5; A0AUV1; Q8CGP7; Q8CGP6 Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3; Histone H2A type 1-G OS=Mus musculus OX=10090 GN=H2ac11 PE=1 SV=1; Histone H2A type 1-F OS=Mus musculus OX=10090 GN=Hist1h2af PE=1 SV=3; Histone H2A (Fragment) OS=Mus musculus OX=10090 GN=H2ac12 PE=2 SV=1; Histone H2A type 1-K OS=Mus musculus OX=10090 GN=H2ac15 PE=1 SV=3; Histone H2A type 1-H OS=Mus musculus OX=10090 GN=H2ac12 PE=1 SV=3 1 3 3 0.3383 0 1 1 1 437.91919 1311.74302 1311.74212 0.68 0.0003 0/0 0 0 127021832 HCD 30 MS2 23.86359 673 8.88 35.8381 8079 8079 8076 QEplus033719.raw F4 1464.2 547.2 713.1 495.7 358.2 459.9 315 2.01 1 FALSE 0.006396 0.1033 -0.002 -250 24310 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERQEAEEAK [K].eRQEAEEAk.[E] N-Term(TMT6plex); K9(TMT6plex) 3 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4; Q3TZQ2 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 1 3 3 0.5829 0 1 1 1 516.61969 1547.84452 1547.84296 1.01 0.00052 0/0 0 0 44296492 HCD 30 MS2 14.08202 667.8 29.612 35.8403 8080 8080 8076 QEplus033719.raw F4 1385.8 438.8 647.5 516.9 459.7 557.8 390 3.86 1 FALSE 1.14E-05 3.07E-06 1.145 -250 24315 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTNESLER [RK].gTNESLER.[Q-] N-Term(TMT6plex) 11 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 P03995; A0MTM0; A0A0A6YWC8; Q3TWV0; P03995-2; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Glial fibrillary acidic protein OS=Mus musculus OX=10090 GN=Gfap PE=1 SV=4; Glial fibrillary acidic protein (Fragment) OS=Mus musculus OX=10090 GN=Gfap PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Isoform 2 of Glial fibrillary acidic protein OS=Mus musculus OX=10090 GN=Gfap; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.2894 0 1 1 1 567.8017 1134.59612 1134.59523 0.78 0.00044 0/0 0 0 38473228 HCD 30 MS2 20.68391 829.8 53.494 35.8426 8081 8081 8076 QEplus033719.raw F4 868.6 753.8 827.1 725.1 966.2 837.8 226 3.11 2 FALSE 1.14E-05 0.0002981 0.766 -250 24324 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VKDEPQRR [K].vkDEPQRR.[S] N-Term(TMT6plex); K2(TMT6plex) 6 Q5XK38 Hmgn2 protein OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1 Q5XK38; A3KGL9; Q58E57; F6W687; Q5BL14; B7ZCQ3 Hmgn2 protein OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; Non-histone chromosomal protein HMG-17 OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; High mobility group nucleosomal binding domain 2 OS=Mus musculus OX=10090 GN=Hmgn2 PE=2 SV=1; Non-histone chromosomal protein HMG-17 (Fragment) OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; High mobility group nucleosomal binding domain 2 OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; Non-histone chromosomal protein HMG-17 OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1 2 4 4 0.2324 0 1 1 1 372.22849 1485.89211 1485.89018 1.3 0.00048 0/0 0 0 26556136 HCD 30 MS2 52.50919 436.9 25.687 35.8448 8082 8082 8076 QEplus033719.raw F4 647.3 324.6 408.8 346.3 535.1 359.6 333 2.41 1 FALSE 0.007275 0.1164 -0.034 -250 24337 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQHPNPLR [R].gQHPNPLR.[E] N-Term(TMT6plex) 2 Q3TJC2 SGNH_hydro domain-containing protein OS=Mus musculus OX=10090 GN=Pafah1b3 PE=1 SV=1 Q3TJC2; D3Z7E6 SGNH_hydro domain-containing protein OS=Mus musculus OX=10090 GN=Pafah1b3 PE=1 SV=1; Platelet-activating factor acetylhydrolase IB subunit alpha1 OS=Mus musculus OX=10090 GN=Pafah1b3 PE=1 SV=1 0 3 3 0.2737 0 1 1 1 383.22321 1147.65506 1147.65336 1.49 0.00057 0/0 0 0 25820986 HCD 30 MS2 21.47755 365.5 54.237 35.8493 8084 8084 8076 QEplus033719.raw F4 401.2 284.7 405.8 335.1 399.4 366.9 257 3.69 1 FALSE 1.14E-05 0.0004067 0.74 -250 24343 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGNYSER [R].kGNYSER.[V] N-Term(TMT6plex); K1(TMT6plex) 6 Q8BFU2 Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3 Q8BFU2; C0HKE5; Q8CGP5; A0AUV1; Q8CGP7; Q8CGP6 Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3; Histone H2A type 1-G OS=Mus musculus OX=10090 GN=H2ac11 PE=1 SV=1; Histone H2A type 1-F OS=Mus musculus OX=10090 GN=Hist1h2af PE=1 SV=3; Histone H2A (Fragment) OS=Mus musculus OX=10090 GN=H2ac12 PE=2 SV=1; Histone H2A type 1-K OS=Mus musculus OX=10090 GN=H2ac15 PE=1 SV=3; Histone H2A type 1-H OS=Mus musculus OX=10090 GN=H2ac12 PE=1 SV=3 1 2 2 0.328 0 1 1 1 656.37524 1311.74321 1311.74212 0.83 0.00055 0/0 0 0 14694030 HCD 30 MS2 14.12724 524.3 110 35.8519 8085 8085 8076 QEplus033719.raw F4 1188.9 451.5 570.8 314.3 244.9 375.1 315 1.89 1 FALSE 0.008598 0.1518 -0.089 -250 24351 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDEGHPFR [K].sDEGHPFR.[A] N-Term(TMT6plex) 6 Q99P72 Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4 PE=1 SV=2 Q8K3G7; Q99P72-3; Q99P72; Q99P72-4; Q99P72-1; Q99P72-5 Reticulon OS=Mus musculus OX=10090 GN=Rtn4 PE=2 SV=1; Isoform D of Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4; Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4 PE=1 SV=2; Isoform B2 of Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4; Isoform C of Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4; Isoform B of Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4 0 2 2 0.6853 0 1 1 1 587.29718 1173.58708 1173.585 1.77 0.00104 0/0 0 0 6456610 HCD 30 MS2 19.36488 448.6 110 35.8544 8086 8086 8076 QEplus033719.raw F4 560.1 342.9 405.6 579.5 509.5 293.9 65 2.32 1 FALSE 1.14E-05 0.0005465 0.715 -250 24357 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSSGASSSSFSSSR [R].qSSGASSSSFSSSR.[A] N-Term(TMT6plex) 3 B9EKE9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1 B9EKE9; B7ZWF1; Q3TQX5 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=1 0 2 2 0.8027 0 1 1 1 795.88251 1590.75774 1590.75571 1.28 0.00101 0/0 0 0 10008825 HCD 30 MS2 0 231.4 110 35.8617 8088 8088 8087 QEplus033719.raw F4 229.8 266.3 264.5 157.5 278.5 192.1 67 4.51 1 FALSE 1.14E-05 1.87E-13 2.515 -250 24362 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAHLYR [R].qAHLYR.[G] N-Term(TMT6plex) 2 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm 0 2 2 0.3812 0 1 1 1 508.79617 1016.58507 1016.58388 1.17 0.00059 0/0 0 0 137812560 HCD 30 MS2 3.715155 552.8 10.493 35.8665 8090 8090 8087 QEplus033719.raw F4 520.3 468.9 543.9 546.6 683.2 554.1 377 2.23 2 FALSE 0.004131 0.07599 0.072 -250 24387 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVEDEATR [K].aVEDEATR.[G] N-Term(TMT6plex) 11 A0A1L1SQ51 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1 Q71LX4; Q68FD6; A0A1L1SRI1; A0A1L1SQ51; B2RY15; Q9CS79; Q6PB69; Q8CHG4; Q8CDM9; A0A1L1SQP9; E9PUM4 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=3; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Tln2 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; MKIAA0320 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1 0 2 2 0.5775 0 1 1 1 560.29645 1119.58562 1119.58433 1.15 0.00064 0/0 0 0 18926888 HCD 30 MS2 15.50536 532.5 98.217 35.8733 8093 8093 8087 QEplus033719.raw F4 557.2 367.3 528.1 468.9 722.4 551.2 231 2.84 1 FALSE 1.14E-05 0.0004292 0.735 -250 24393 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDGAPSR [K].mDGAPSR.[V] N-Term(TMT6plex) 4 Q91Z31 Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 PE=1 SV=2 Q91Z31; A0A0G2JGW0; Q3V328; Q91Z31-2 Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 PE=1 SV=2; Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 PE=1 SV=1; Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 PE=1 SV=1; Isoform 2 of Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 0 2 2 0.5446 0 1 1 1 481.75027 962.49327 962.49268 0.61 0.0003 0/0 0 0 12221994 HCD 30 MS2 37.00572 811.8 110 35.8758 8094 8094 8087 QEplus033719.raw F4 863.7 711 791.7 593.5 1156 755 79 2.24 1 FALSE 0.001473 0.02145 0.269 -250 24404 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEERPTQNEK [K].gEERPTQNEk.[R] N-Term(TMT6plex); K10(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; A0A3Q4EH91; Q9D0E1-2; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 2 2 0.5516 0 1 1 1 823.45026 1645.89324 1645.89097 1.38 0.00113 0/0 0 0 4209424 HCD 30 MS2 7.422179 120.7 110 35.8806 8096 8096 8087 QEplus033719.raw F4 144.5 100.5 126.7 115.5 139.3 97.4 395 2.52 1 FALSE 1.14E-05 0.0002554 0.779 -250 24411 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERQEAEEAK [K].eRQEAEEAk.[E] N-Term(TMT6plex); K9(TMT6plex) 3 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4; Q3TZQ2 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 1 2 2 0.5118 0 1 1 1 774.4245 1547.84172 1547.84296 -0.8 -0.00062 0/0 0 0 3653695.5 HCD 30 MS2 7.258127 149.1 110 35.8831 8097 8097 8087 QEplus033719.raw F4 326.3 92.4 138.8 115 89.9 132.5 388 2.54 1 FALSE 1.14E-05 0.000448 0.732 -250 24432 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDEGHPFR [K].sDEGHPFR.[A] N-Term(TMT6plex) 6 Q99P72 Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4 PE=1 SV=2 Q8K3G7; Q99P72-3; Q99P72; Q99P72-4; Q99P72-1; Q99P72-5 Reticulon OS=Mus musculus OX=10090 GN=Rtn4 PE=2 SV=1; Isoform D of Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4; Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4 PE=1 SV=2; Isoform B2 of Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4; Isoform C of Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4; Isoform B of Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4 0 3 3 0.635 0 1 1 1 391.867 1173.58646 1173.585 1.24 0.00049 0/0 0 0 108906072 HCD 30 MS2 14.78845 302.3 10.765 35.8952 8101 8101 8098 QEplus033719.raw F4 375.2 218.1 285.1 362.6 333.1 239.4 65 3.37 1 FALSE 2.26E-05 0.001002 0.662 -250 24449 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVPQCPSGR [K].rVPQcPSGR.[V] N-Term(TMT6plex); C5(Carbamidomethyl) 5 Q9JKV1 Proteasomal ubiquitin receptor ADRM1 OS=Mus musculus OX=10090 GN=Adrm1 PE=1 SV=2 Q9JKV1; Q8VCI8; D3YUD8; A0A0A6YVU8; A0A1S6GWG3 Proteasomal ubiquitin receptor ADRM1 OS=Mus musculus OX=10090 GN=Adrm1 PE=1 SV=2; Adrm1 protein OS=Mus musculus OX=10090 GN=Adrm1 PE=2 SV=1; Predicted pseudogene 9774 OS=Mus musculus OX=10090 GN=Gm9774 PE=3 SV=3; Predicted pseudogene 9774 OS=Mus musculus OX=10090 GN=Gm9774 PE=3 SV=1; RPN13_C domain-containing protein OS=Mus musculus OX=10090 GN=Adrm1 PE=2 SV=1 1 3 3 0.6063 0 1 1 1 429.23907 1285.70267 1285.69965 2.35 0.00101 0/0 0 0 83472448 HCD 30 MS2 35.57343 251.3 11.658 35.8997 8103 8103 8098 QEplus033719.raw F4 411.7 167.2 239.2 184.3 231.5 273.8 201 4.14 1 FALSE 1.14E-05 1.59E-06 1.199 -250 24469 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSSGASSSSFSSSR [R].qSSGASSSSFSSSR.[A] N-Term(TMT6plex) 3 B9EKE9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1 B9EKE9; B7ZWF1; Q3TQX5 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=1 0 3 3 0.8 0 1 1 1 530.92413 1590.75785 1590.75571 1.34 0.00071 0/0 0 0 8118134.5 HCD 30 MS2 2.785957 164.4 110 35.9067 8106 8106 8098 QEplus033719.raw F4 179.7 136.3 172.7 125.4 194.4 177.8 67 4.8 1 FALSE 1.14E-05 1.63E-10 1.957 -250 24475 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPNDYSQAR [K].gPNDYSQAR.[N] N-Term(TMT6plex) 6 Q8K2H5 "Melanoma antigen, family D, 1 OS=Mus musculus OX=10090 GN=Maged1 PE=2 SV=1" Q91W72; Q8K2H5; Q3UIL5; Q9QYH6; Q571N9; Q3UXM3 "Maged1 protein OS=Mus musculus OX=10090 GN=Maged1 PE=2 SV=1; Melanoma antigen, family D, 1 OS=Mus musculus OX=10090 GN=Maged1 PE=2 SV=1; MAGE domain-containing protein OS=Mus musculus OX=10090 GN=Maged1 PE=2 SV=1; Melanoma-associated antigen D1 OS=Mus musculus OX=10090 GN=Maged1 PE=1 SV=1; MFLJ00163 protein (Fragment) OS=Mus musculus OX=10090 GN=Maged1 PE=2 SV=1; MAGE domain-containing protein OS=Mus musculus OX=10090 GN=Maged1 PE=2 SV=1" 0 2 2 0.6996 0 1 1 1 618.81287 1236.61846 1236.61703 1.15 0.00071 0/0 0 0 8100541.5 HCD 30 MS2 27.21995 366.3 110 35.9092 8107 8107 8098 QEplus033719.raw F4 366.4 282.2 461 294.2 365.8 428.3 154 2.63 1 FALSE 1.14E-05 3.58E-05 0.942 -250 24480 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLHSCSVR [R].tLHScSVR.[F] N-Term(TMT6plex); C5(Carbamidomethyl) 1 Q9JIF7 Coatomer subunit beta OS=Mus musculus OX=10090 GN=Copb1 PE=1 SV=1 Q9JIF7 Coatomer subunit beta OS=Mus musculus OX=10090 GN=Copb1 PE=1 SV=1 0 2 2 0.4338 0 1 1 1 594.82269 1188.63811 1188.63566 2.06 0.00123 0/0 0 0 5677440.5 HCD 30 MS2 23.00605 342.2 110 35.9117 8108 8108 8098 QEplus033719.raw F4 519.9 272.5 294.4 290.2 422.4 253.5 240 2.72 1 FALSE 0.0002419 0.004828 0.505 -250 24496 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQIEEQR [K].qQIEEQR.[SV] N-Term(TMT6plex) 3 G3UYU4 Flotillin OS=Mus musculus OX=10090 GN=Flot1 PE=1 SV=1 G3UYU4; Q3TJS0; O08917 Flotillin OS=Mus musculus OX=10090 GN=Flot1 PE=1 SV=1; Flotillin OS=Mus musculus OX=10090 GN=Flot1 PE=2 SV=1; Flotillin-1 OS=Mus musculus OX=10090 GN=Flot1 PE=1 SV=1 0 2 2 0.4029 0 1 1 1 580.31787 1159.62847 1159.62687 1.38 0.0008 0/0 0 0 5433130.5 HCD 30 MS2 5.164296 285.5 110 35.9216 8111 8111 8109 QEplus033719.raw F4 295.8 301.8 278.7 145 449.2 242.7 224 2.73 1 FALSE 7.59E-05 0.002792 0.566 -250 24497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQLEEQR [K].qQLEEQR.[SV] N-Term(TMT6plex) 4 E9QA15; Q8VD79; F6T2Z7; F6QLP8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; H-caldesmon (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 0 2 2 0.4029 0 1 2 2 580.31787 1159.62847 1159.62687 1.38 0.0008 0/0 0 0 5433130.5 HCD 30 MS2 5.164296 285.5 110 35.9216 8111 8111 8109 QEplus033719.raw F4 295.8 301.8 278.7 145 449.2 242.7 224 2.73 0 FALSE 7.59E-05 0.002792 0.566 -250 24505 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNTESVK [K].rNTESVk.[G] N-Term(TMT6plex); K7(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 3 3 0.411 0 1 1 1 431.26303 1291.77454 1291.77342 0.87 0.00037 0/0 0 0 75476920 HCD 30 MS2 53.14048 366.6 9.939 35.9238 8112 8112 8109 QEplus033719.raw F4 1116.4 130.7 208.6 220.2 161.6 362 407 2.19 1 FALSE 0.001877 0.0317 0.208 -250 24513 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLHSCSVR [R].tLHScSVR.[F] N-Term(TMT6plex); C5(Carbamidomethyl) 1 Q9JIF7 Coatomer subunit beta OS=Mus musculus OX=10090 GN=Copb1 PE=1 SV=1 Q9JIF7 Coatomer subunit beta OS=Mus musculus OX=10090 GN=Copb1 PE=1 SV=1 0 3 3 0.5048 0 1 1 1 396.88373 1188.63663 1188.63566 0.82 0.00032 0/0 0 0 47107304 HCD 30 MS2 26.8047 344.1 19.752 35.9261 8113 8113 8109 QEplus033719.raw F4 911.2 156.3 229.8 226.2 231.7 309.1 240 3.13 1 FALSE 0.001092 0.01411 0.344 -250 24530 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IEAENR [R].iEAENR.[A] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.211 0 1 1 1 480.76935 960.53142 960.53118 0.25 0.00012 0/0 0 0 25014110 HCD 30 MS2 16.17718 896.8 76.876 35.9306 8115 8115 8109 QEplus033719.raw F4 1066.4 757.3 977.7 827.1 898.5 853.8 235 2.18 2 FALSE 0.005081 0.08759 0.041 -250 24535 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VKDEPQRR [K].vkDEPQRR.[S] N-Term(TMT6plex); K2(TMT6plex) 6 Q5XK38 Hmgn2 protein OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1 Q5XK38; A3KGL9; Q58E57; F6W687; Q5BL14; B7ZCQ3 Hmgn2 protein OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; Non-histone chromosomal protein HMG-17 OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; High mobility group nucleosomal binding domain 2 OS=Mus musculus OX=10090 GN=Hmgn2 PE=2 SV=1; Non-histone chromosomal protein HMG-17 (Fragment) OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; High mobility group nucleosomal binding domain 2 OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; Non-histone chromosomal protein HMG-17 OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1 2 3 3 0.5352 0 1 1 1 495.96875 1485.8917 1485.89018 1.02 0.00051 0/0 0 0 18257540 HCD 30 MS2 39.72723 718.6 73.176 35.9329 8116 8116 8109 QEplus033719.raw F4 1059 536.1 682.7 623.6 808 602.5 312 3.27 1 FALSE 1.14E-05 2.86E-05 0.961 -250 24543 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVPQCPSGR [K].rVPQcPSGR.[V] N-Term(TMT6plex); C5(Carbamidomethyl) 5 Q9JKV1 Proteasomal ubiquitin receptor ADRM1 OS=Mus musculus OX=10090 GN=Adrm1 PE=1 SV=2 Q9JKV1; Q8VCI8; D3YUD8; A0A0A6YVU8; A0A1S6GWG3 Proteasomal ubiquitin receptor ADRM1 OS=Mus musculus OX=10090 GN=Adrm1 PE=1 SV=2; Adrm1 protein OS=Mus musculus OX=10090 GN=Adrm1 PE=2 SV=1; Predicted pseudogene 9774 OS=Mus musculus OX=10090 GN=Gm9774 PE=3 SV=3; Predicted pseudogene 9774 OS=Mus musculus OX=10090 GN=Gm9774 PE=3 SV=1; RPN13_C domain-containing protein OS=Mus musculus OX=10090 GN=Adrm1 PE=2 SV=1 1 2 2 0.3987 0 1 1 1 643.35626 1285.70525 1285.69965 4.35 0.0028 0/0 0 0 8590332 HCD 30 MS2 42.38157 296.9 110 35.9354 8117 8117 8109 QEplus033719.raw F4 424.3 227 315.1 240.6 259.1 315.5 234 1.53 1 FALSE 0.005254 0.08954 0.035 -250 24549 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSVSDNDIR [R].rSVSDNDIR.[K] N-Term(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 1 2 2 0.4353 0 1 1 1 645.85266 1290.69805 1290.69634 1.32 0.00085 0/0 0 0 8319388.5 HCD 30 MS2 34.22745 193.9 110 35.9379 8118 8118 8109 QEplus033719.raw F4 438.9 106.7 157.5 139.6 128.3 192.7 317 2.78 1 FALSE 5.44E-05 0.002406 0.58 -250 24561 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQHPNPLR [R].gQHPNPLR.[E] N-Term(TMT6plex) 2 Q3TJC2 SGNH_hydro domain-containing protein OS=Mus musculus OX=10090 GN=Pafah1b3 PE=1 SV=1 Q3TJC2; D3Z7E6 SGNH_hydro domain-containing protein OS=Mus musculus OX=10090 GN=Pafah1b3 PE=1 SV=1; Platelet-activating factor acetylhydrolase IB subunit alpha1 OS=Mus musculus OX=10090 GN=Pafah1b3 PE=1 SV=1 0 2 2 0.4154 0 1 1 1 574.3299 1147.65251 1147.65336 -0.73 -0.00042 0/0 0 0 4463155 HCD 30 MS2 24.93008 280.5 110 35.9477 8121 8121 8120 QEplus033719.raw F4 297.3 255.6 293.4 239.5 318.8 278.4 264 1.95 1 FALSE 0.001213 0.01634 0.317 -250 24567 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSVSDNDIR [R].rSVSDNDIR.[K] N-Term(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 1 3 3 0.5143 0 1 1 1 430.90433 1290.69843 1290.69634 1.62 0.0007 0/0 0 0 125762376 HCD 30 MS2 26.69433 282.6 8.754 35.9525 8123 8123 8120 QEplus033719.raw F4 648.9 144.5 226 203.1 179 293.9 317 3.85 1 FALSE 1.14E-05 2.44E-05 0.974 -250 24588 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQRPESFR [K].gQRPESFR.[E] N-Term(TMT6plex) 1 Q8VD00 Sigma intracellular receptor 2 OS=Mus musculus OX=10090 GN=Tmem97 PE=1 SV=1 Q8VD00 Sigma intracellular receptor 2 OS=Mus musculus OX=10090 GN=Tmem97 PE=1 SV=1 0 2 2 0.3085 0 1 1 1 603.33289 1205.65849 1205.65884 -0.28 -0.00017 0/0 0 0 4263515.5 HCD 30 MS2 35.84702 244.7 110 35.9668 8129 8129 8120 QEplus033719.raw F4 258.1 199.4 265.4 239.3 245.9 260.3 319 1.88 1 FALSE 0.004131 0.07602 0.072 -250 24596 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QICCCSR [K].qIcccSR.[V] N-Term(TMT6plex); C3(Carbamidomethyl); C4(Carbamidomethyl); C5(Carbamidomethyl) 11 O08999; D3Z598 Latent-transforming growth factor beta-binding protein 2 OS=Mus musculus OX=10090 GN=Ltbp2 PE=1 SV=2;Latent-transforming growth factor beta-binding protein 4 OS=Mus musculus OX=10090 GN=Ltbp4 PE=1 SV=1 O08999; D3Z598; Q8K4G1; Q0VD84; E9QPS5; E9Q1D6; E9QNQ3; Q8K4G1-2; B2RU79; Q3UGU1; Q8K4G1-3 Latent-transforming growth factor beta-binding protein 2 OS=Mus musculus OX=10090 GN=Ltbp2 PE=1 SV=2; Latent-transforming growth factor beta-binding protein 4 OS=Mus musculus OX=10090 GN=Ltbp4 PE=1 SV=1; Latent-transforming growth factor beta-binding protein 4 OS=Mus musculus OX=10090 GN=Ltbp4 PE=1 SV=2; Latent-transforming growth factor beta-binding protein 2 OS=Mus musculus OX=10090 GN=Ltbp2 PE=1 SV=1; Latent-transforming growth factor beta-binding protein 4 OS=Mus musculus OX=10090 GN=Ltbp4 PE=1 SV=1; Latent-transforming growth factor beta-binding protein 2 OS=Mus musculus OX=10090 GN=Ltbp2 PE=1 SV=1; Latent-transforming growth factor beta-binding protein 2 OS=Mus musculus OX=10090 GN=Ltbp2 PE=1 SV=1; Isoform 2 of Latent-transforming growth factor beta-binding protein 4 OS=Mus musculus OX=10090 GN=Ltbp4; Latent transforming growth factor beta binding protein 4 OS=Mus musculus OX=10090 GN=Ltbp4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ltbp4 PE=2 SV=1; Isoform 3 of Latent-transforming growth factor beta-binding protein 4 OS=Mus musculus OX=10090 GN=Ltbp4 0 2 2 0.6547 0 1 1 1 606.77759 1212.5479 1212.5485 -0.49 -0.0003 0/0 0 0 3866041.5 HCD 30 MS2 11.3307 227.4 110 35.9693 8130 8130 8120 QEplus033719.raw F4 234.4 117.9 243.8 316.1 171.1 281 22 2.23 2 FALSE 0.001351 0.01918 0.288 -250 24603 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSQITQQSTNQSR [K].gSQITQQSTNQSR.[N] N-Term(TMT6plex) 3 Q99J95 Cyclin-dependent kinase 9 OS=Mus musculus OX=10090 GN=Cdk9 PE=1 SV=1 Q99J95-3; Q99J95; Q99J95-2 Isoform 3 of Cyclin-dependent kinase 9 OS=Mus musculus OX=10090 GN=Cdk9; Cyclin-dependent kinase 9 OS=Mus musculus OX=10090 GN=Cdk9 PE=1 SV=1; Isoform 2 of Cyclin-dependent kinase 9 OS=Mus musculus OX=10090 GN=Cdk9 0 2 2 0.7256 0 1 1 1 832.43176 1663.85625 1663.85609 0.09 0.00008 0/0 0 0 2527458.75 HCD 30 MS2 34.84277 101.7 110 35.9766 8132 8132 8131 QEplus033719.raw F4 107.8 99.3 125 75.5 107.3 95.2 237 4.41 1 FALSE 1.14E-05 7.80E-14 2.587 -250 24620 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQRPESFR [K].gQRPESFR.[E] N-Term(TMT6plex) 1 Q8VD00 Sigma intracellular receptor 2 OS=Mus musculus OX=10090 GN=Tmem97 PE=1 SV=1 Q8VD00 Sigma intracellular receptor 2 OS=Mus musculus OX=10090 GN=Tmem97 PE=1 SV=1 0 3 3 0.3034 0 1 1 1 402.55789 1205.65912 1205.65884 0.24 0.0001 0/0 0 0 55354256 HCD 30 MS2 30.28279 432.8 21.967 35.9812 8134 8134 8131 QEplus033719.raw F4 432.1 382 486.6 382.4 428.5 485 319 2.67 1 FALSE 0.002586 0.05083 0.14 -250 24627 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLENHAR [R].vLENHAR.[G] N-Term(TMT6plex) 2 Q3UPL0 Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2 Q3UPL0; Q3UPL0-2 Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2; Isoform 2 of Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a 0 3 3 0.4593 0 1 1 1 356.54367 1067.61646 1067.61591 0.52 0.00018 0/0 0 0 37383472 HCD 30 MS2 65.72426 375 23.993 35.9834 8135 8135 8131 QEplus033719.raw F4 413.9 300.6 378.1 346.8 475.8 335 83 3.44 1 FALSE 0.0004091 0.007279 0.453 -250 24631 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FHQQGAPR [R].fHQQGAPR.[A] N-Term(TMT6plex) 1 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 0 2 2 0.6401 0 1 1 1 585.32233 1169.63738 1169.63771 -0.28 -0.00016 0/0 0 0 18462068 HCD 30 MS2 9.30598 641.6 110 35.9859 8136 8136 8131 QEplus033719.raw F4 635.1 655.7 653.6 436.5 876.2 592.3 194 2.89 1 FALSE 3.35E-05 0.001236 0.643 -250 24648 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLENHAR [R].vLENHAR.[G] N-Term(TMT6plex) 2 Q3UPL0 Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2 Q3UPL0; Q3UPL0-2 Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2; Isoform 2 of Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a 0 2 2 0.5451 0 1 1 1 534.31293 1067.61858 1067.61591 2.5 0.00133 0/0 0 0 7469174.5 HCD 30 MS2 52.40646 809 110 35.9934 8139 8139 8131 QEplus033719.raw F4 906.3 603.3 795.8 783.5 968.4 796.9 150 2.33 1 FALSE 0.0002218 0.004517 0.513 -250 24654 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HHQEALSTK [K].hHQEALSTk.[E] N-Term(TMT6plex); K9(TMT6plex) 2 Q7TPV4 Myb-binding protein 1A OS=Mus musculus OX=10090 GN=Mybbp1a PE=1 SV=2 Q3TLF6; Q7TPV4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Mybbp1a PE=2 SV=1; Myb-binding protein 1A OS=Mus musculus OX=10090 GN=Mybbp1a PE=1 SV=2 0 3 3 0.6744 0 1 1 1 503.62509 1508.86072 1508.85855 1.44 0.00072 0/0 0 0 4763531 HCD 30 MS2 57.76133 408.5 110 35.9959 8140 8140 8131 QEplus033719.raw F4 433.6 293.8 401.4 382.2 551.5 388.6 415 3.87 1 FALSE 1.14E-05 1.64E-06 1.197 -250 24662 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STLCCQR [K].sTLccQR.[S] N-Term(TMT6plex); C4(Carbamidomethyl); C5(Carbamidomethyl) 3 A0A140LJJ5 A-kinase anchor protein 13 OS=Mus musculus OX=10090 GN=Akap13 PE=1 SV=1 A0A140LJJ5; E9Q394; E9Q394-2 A-kinase anchor protein 13 OS=Mus musculus OX=10090 GN=Akap13 PE=1 SV=1; A-kinase anchor protein 13 OS=Mus musculus OX=10090 GN=Akap13 PE=1 SV=1; Isoform 2 of A-kinase anchor protein 13 OS=Mus musculus OX=10090 GN=Akap13 0 2 2 0.466 0 1 1 1 577.28735 1153.56743 1153.56553 1.65 0.00095 0/0 0 0 4625358 HCD 30 MS2 0 253.7 110 36.0057 8143 8143 8142 QEplus033719.raw F4 287.8 172.7 264.2 208.8 298.1 290.5 65 1.91 1 FALSE 0.001001 0.01322 0.356 -250 24678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VKEDPDGEHARR [K].vkEDPDGEHARR.[A] N-Term(TMT6plex); K2(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; A0A3Q4EH91; Q9D0E1-2; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 2 5 5 0.6264 0 1 1 1 374.21011 1867.02146 1867.01863 1.52 0.00057 0/0 0 0 11756650 HCD 30 MS2 19.13397 389.6 76.031 36.0105 8145 8145 8142 QEplus033719.raw F4 503.5 344.2 433.7 279 433 344.2 409 2.73 1 FALSE 0.001541 0.02336 0.255 -250 24707 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQAPPVR [K].qQAPPVR.[N] N-Term(TMT6plex) 1 O08553 Dihydropyrimidinase-related protein 2 OS=Mus musculus OX=10090 GN=Dpysl2 PE=1 SV=2 O08553 Dihydropyrimidinase-related protein 2 OS=Mus musculus OX=10090 GN=Dpysl2 PE=1 SV=2 0 2 2 0.396 0 1 1 1 512.80975 1024.61223 1024.61009 2.08 0.00107 0/0 0 0 1599673.625 HCD 30 MS2 40.91526 235.5 110 36.0205 8149 8149 8142 QEplus033719.raw F4 245.8 195.2 265.2 213.3 242.5 251 140 1.49 1 FALSE 0.007528 0.123 -0.048 -250 24730 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLTSAGR [R].gLTSAGR.[K] N-Term(TMT6plex) 2 Q5M8Q0 Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1 Q5M8Q0; Q3U7D2 Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1; Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1 0 2 2 0.3926 0 1 1 1 445.76642 890.52556 890.5257 -0.15 -0.00007 0/0 0 0 11652383 HCD 30 MS2 62.72081 757 42.294 36.0273 8152 8152 8142 QEplus033719.raw F4 844.8 576.6 770.5 710.8 873.8 765.7 86 2.7 1 FALSE 0.0001603 0.003831 0.532 -250 24741 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VKEDPDGEHARR [K].vkEDPDGEHARR.[A] N-Term(TMT6plex); K2(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; A0A3Q4EH91; Q9D0E1-2; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 2 3 3 0.6436 0 1 1 1 623.01135 1867.0195 1867.01863 0.47 0.00029 0/0 0 0 2745875.75 HCD 30 MS2 0 126.8 110 36.0371 8155 8155 8153 QEplus033719.raw F4 120.1 135 143.6 93.2 152 117.2 400 4.04 1 FALSE 1.14E-05 1.58E-09 1.769 -250 24754 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HYCESVRPR [R].hYcESVRPR.[C] N-Term(TMT6plex); C3(Carbamidomethyl) 2 Q8BVZ6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Lmcd1 PE=2 SV=1 Q8BVZ6; Q3TVW6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Lmcd1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lmcd1 PE=1 SV=1 0 4 4 0.5065 0 1 1 1 358.93845 1432.73195 1432.73168 0.19 0.00007 0/0 0 0 5016451 HCD 30 MS2 36.55953 210.3 110 36.0463 8159 8159 8153 QEplus033719.raw F4 250.7 166.1 223.4 161.2 246.1 214.4 213 3.08 1 FALSE 0.001092 0.01417 0.343 -250 24783 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETHAFGRD [K].eTHAFGRD.[-] N-Term(TMT6plex) 2 Q91V76 Ester hydrolase C11orf54 homolog OS=Mus musculus OX=10090 PE=1 SV=1 A0A1L1SSF8; Q91V76 RIKEN cDNA 4931406C07 gene OS=Mus musculus OX=10090 GN=4931406C07Rik PE=1 SV=1; Ester hydrolase C11orf54 homolog OS=Mus musculus OX=10090 PE=1 SV=1 1 2 2 0.5508 0 1 1 1 581.29474 1161.5822 1161.585 -2.41 -0.0014 0/0 0 0 2768334.5 HCD 30 MS2 18.03954 221.7 110 36.0563 8163 8163 8153 QEplus033719.raw F4 227.5 182.6 236.1 180.8 272 231 80 2.36 1 FALSE 0.001607 0.0251 0.244 -250 24789 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TRDFTSSR [K].tRDFTSSR.[M] N-Term(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 3 3 0.4286 0 1 1 1 400.21762 1198.63831 1198.63777 0.45 0.00018 0/0 0 0 15540825 HCD 30 MS2 18.5435 447.4 74.874 36.0636 8165 8165 8164 QEplus033719.raw F4 607.4 207.8 398.6 569.7 343.3 557.8 169 2.03 1 FALSE 0.007237 0.1149 -0.031 -250 24795 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGNIGDGGGAADR [R].gGNIGDGGGAADR.[V] N-Term(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 0 2 2 0.6312 0 1 1 1 673.33673 1345.66619 1345.66577 0.31 0.00021 0/0 0 0 5012920.5 HCD 30 MS2 0 210.1 110 36.0662 8166 8166 8164 QEplus033719.raw F4 233.2 172.9 229.8 189.4 219.6 215.6 95 4.04 1 FALSE 1.14E-05 7.38E-14 2.592 -250 24831 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQECVEECR [R].gQEcVEEcR.[V] N-Term(TMT6plex); C4(Carbamidomethyl); C8(Carbamidomethyl) 3 P70424 Receptor tyrosine-protein kinase erbB-2 OS=Mus musculus OX=10090 GN=Erbb2 PE=1 SV=3 P70424; Q80Y89; Q8C0E7 Receptor tyrosine-protein kinase erbB-2 OS=Mus musculus OX=10090 GN=Erbb2 PE=1 SV=3; Receptor protein-tyrosine kinase OS=Mus musculus OX=10090 GN=Erbb2 PE=2 SV=1; Protein kinase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Erbb2 PE=2 SV=1 0 2 2 0.6958 0 1 1 1 698.31384 1395.62041 1395.61942 0.71 0.0005 0/0 0 0 2678379.75 HCD 30 MS2 0 113.9 110 36.0782 8171 8171 8164 QEplus033719.raw F4 127.9 89.9 123.8 91.5 101.7 148.9 18 3.32 1 FALSE 1.14E-05 1.90E-05 0.994 -250 24835 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALAEGQQR [R].aLAEGQQR.[G] N-Term(TMT6plex) 5 G5E896 Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=1 A0A0R4J1Q0; Q3UJB9-2; G5E896; Q3UJB9; D6RE33 Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=1; Isoform 2 of Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4; Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=1; Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=2; Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=1 0 2 2 0.4591 0 1 1 1 551.31494 1101.62261 1101.62139 1.11 0.00061 0/0 0 0 20136296 HCD 30 MS2 19.55954 791.6 97.969 36.0805 8172 8172 8164 QEplus033719.raw F4 780.8 673.4 833.5 745.2 879.3 837.5 271 2.81 1 FALSE 1.14E-05 0.0006621 0.698 -250 24851 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQPPTSPEGR [R].sQPPTSPEGR.[A] N-Term(TMT6plex) 2 E9Q6R7 Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 O08614; E9Q6R7 Cytoskeletal protein OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 0 2 2 0.5318 0 1 1 1 642.84082 1284.67436 1284.67454 -0.14 -0.00009 0/0 0 0 10546784 HCD 30 MS2 0 208.2 110 36.0853 8174 8174 8164 QEplus033719.raw F4 206 166.4 233.9 184.7 198.5 259.6 200 3.46 1 FALSE 1.14E-05 0.0009274 0.669 -250 24867 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDPNTGR [K].mDPNTGR.[S] N-Term(TMT6plex) 5 Q544Z3 S1 protein D2 OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1 Q9D6G1; Q80XR6; Q544Z3; Q20BD0; Q3TMZ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; S1 protein D2 OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1 0 2 2 0.2415 0 1 1 1 510.26273 1019.51818 1019.51415 3.95 0.00201 0/0 0 0 3902705.5 HCD 30 MS2 54.18538 473.6 110 36.0951 8177 8177 8175 QEplus033719.raw F4 496.2 416.9 453.2 376.3 681.6 417.2 144 2.36 1 FALSE 0.0001603 0.003572 0.54 -250 24879 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FHQQGAPR [R].fHQQGAPR.[A] N-Term(TMT6plex) 1 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 0 3 3 0.5476 0 1 1 1 390.55078 1169.63779 1169.63771 0.07 0.00003 0/0 0 0 82548488 HCD 30 MS2 15.72145 205.4 15.496 36.0996 8179 8179 8175 QEplus033719.raw F4 217.3 180.3 200.8 169.4 266.8 197.8 185 3.47 1 FALSE 0.0004091 0.007347 0.451 -250 24905 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VKEDPDGEHARR [K].vkEDPDGEHARR.[A] N-Term(TMT6plex); K2(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; A0A3Q4EH91; Q9D0E1-2; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 2 4 4 0.6207 0 1 1 1 467.51059 1867.02053 1867.01863 1.02 0.00047 0/0 0 0 28696506 HCD 30 MS2 18.84391 542 39.874 36.1063 8182 8182 8175 QEplus033719.raw F4 529.9 513.9 574.9 440.6 670.7 522.2 402 3.48 1 FALSE 3.35E-05 0.001145 0.65 -250 24912 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MTTDEGTGGR [R].mTTDEGTGGR.[G] N-Term(TMT6plex) 7 Q61398 Procollagen C-endopeptidase enhancer 1 OS=Mus musculus OX=10090 GN=Pcolce PE=1 SV=2 A0A0G2JE29; D3YWH0; Q3UN82; D3YZE3; Q61398; Q3TX39; D3YUE2 Procollagen C-endopeptidase enhancer 1 (Fragment) OS=Mus musculus OX=10090 GN=Pcolce PE=1 SV=1; Procollagen C-endopeptidase enhancer 1 (Fragment) OS=Mus musculus OX=10090 GN=Pcolce PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pcolce PE=2 SV=1; Procollagen C-endopeptidase enhancer 1 (Fragment) OS=Mus musculus OX=10090 GN=Pcolce PE=1 SV=1; Procollagen C-endopeptidase enhancer 1 OS=Mus musculus OX=10090 GN=Pcolce PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pcolce PE=2 SV=1; Procollagen C-endopeptidase enhancer 1 OS=Mus musculus OX=10090 GN=Pcolce PE=1 SV=1 0 2 2 0.6259 0 1 1 1 627.30322 1253.59917 1253.59933 -0.13 -0.00008 0/0 0 0 21195904 HCD 30 MS2 6.120259 513.5 70.212 36.1086 8183 8183 8175 QEplus033719.raw F4 506.2 499.7 570.3 452.9 581.1 470.6 69 2.78 1 FALSE 1.14E-05 7.22E-07 1.264 -250 24922 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDDFRR [R].eDDFRR.[V] N-Term(TMT6plex) 2 Q9CZN7 "Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" Q9CZN7-2; Q9CZN7 "Isoform 2 of Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2; Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" 1 2 2 0.0556 0 1 1 1 533.77808 1066.54888 1066.54789 0.93 0.00049 0/0 0 0 10075950 HCD 30 MS2 44.15728 600.2 110 36.1111 8184 8184 8175 QEplus033719.raw F4 634.2 499.1 622.3 562.9 667.5 615.4 137 2.16 1 FALSE 0.002465 0.04871 0.146 -250 24927 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SADTQSISR [K].sADTQSISR.[N] N-Term(TMT6plex) 2 Q64521 "Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=2" Q64521; A2AQR0 "Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=2; Glycerol-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=1" 0 2 2 0.5168 0 1 1 1 597.3194 1193.63152 1193.63235 -0.69 -0.00041 0/0 0 0 8271179 HCD 30 MS2 5.724643 490.9 110 36.1136 8185 8185 8175 QEplus033719.raw F4 469.2 521.5 552.8 415.5 505.2 481.4 254 2.98 1 FALSE 1.14E-05 4.13E-06 1.12 -250 24942 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPTQSYR [K].tPTQSYR.[H] N-Term(TMT6plex) 1 Q9D6U8 Protein FAM162A OS=Mus musculus OX=10090 GN=Fam162a PE=1 SV=1 Q9D6U8 Protein FAM162A OS=Mus musculus OX=10090 GN=Fam162a PE=1 SV=1 0 2 2 0.4308 0 1 1 1 541.29639 1081.5855 1081.58394 1.44 0.00078 0/0 0 0 13843575 HCD 30 MS2 12.60215 616.3 110 36.1234 8188 8188 8186 QEplus033719.raw F4 650.2 434.9 636.5 802 559 615 184 1.95 1 FALSE 0.002948 0.05745 0.121 -250 24951 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDPGYEGER [R].gDPGYEGER.[G] N-Term(TMT6plex) 1 Q04857 Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 Q04857 Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 0 2 2 0.588 0 1 1 1 604.79114 1208.575 1208.5745 0.42 0.00025 0/0 0 0 11667057 HCD 30 MS2 10.12945 494.6 110 36.1282 8190 8190 8186 QEplus033719.raw F4 486.1 527.6 533.1 380.8 623.1 417.2 60 3.01 1 FALSE 1.14E-05 5.84E-06 1.092 -250 24956 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQVQSNR [R].vQVQSNR.[E] N-Term(TMT6plex) 16 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 F6XCT0; Q9QXZ0-3; B1ARU4; F6SHS0; E9QA63; E9QNP1; Q3UPG9; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; A0A5F8MP99; Q9QXZ0; A0A0A0MQA6; A0A571BF93; E9PVY8 Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 2 2 0.5535 0 1 1 1 530.30896 1059.61064 1059.61082 -0.17 -0.00009 0/0 0 0 11375386 HCD 30 MS2 7.970403 484.2 110 36.1307 8191 8191 8186 QEplus033719.raw F4 547.9 202.6 523.4 580.3 308.7 742.5 328 2.15 3 FALSE 0.0003408 0.006407 0.47 -250 24965 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSAVPSDGQAR [K].gSAVPSDGQAR.[E] N-Term(TMT6plex) 4 Q9D032 Single-stranded DNA-binding protein 3 OS=Mus musculus OX=10090 GN=Ssbp3 PE=1 SV=2 Q9D032; Q9D032-2; B1AS37; B1AS34 Single-stranded DNA-binding protein 3 OS=Mus musculus OX=10090 GN=Ssbp3 PE=1 SV=2; Isoform 2 of Single-stranded DNA-binding protein 3 OS=Mus musculus OX=10090 GN=Ssbp3; Single-stranded DNA-binding protein 3 OS=Mus musculus OX=10090 GN=Ssbp3 PE=1 SV=1; Single-stranded DNA-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Ssbp3 PE=1 SV=8 0 2 2 0.7244 0 1 1 1 637.33868 1273.67009 1273.66979 0.23 0.00015 0/0 0 0 9593803 HCD 30 MS2 0 251.9 110 36.1332 8192 8192 8186 QEplus033719.raw F4 228.5 260.7 280.2 134.3 341.2 266.2 224 3.12 1 FALSE 1.14E-05 4.01E-10 1.883 -250 24978 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNQTTTDNLR [K].nNQTTTDNLR.[Q] N-Term(TMT6plex) 10 A0A1L1SS47 CCR4-NOT transcription complex subunit 10 OS=Mus musculus OX=10090 GN=Cnot10 PE=1 SV=1 A0A1L1SS47; A0A5F8MPB8; A0A1L1SQF2; Q8BH15-4; A0A1L1SSE2; Q8BH15-5; Q8BH15-3; Q8BH15-2; Q8BH15; A0A1L1SQA7 CCR4-NOT transcription complex subunit 10 OS=Mus musculus OX=10090 GN=Cnot10 PE=1 SV=1; CCR4-NOT transcription complex subunit 10 (Fragment) OS=Mus musculus OX=10090 GN=Cnot10 PE=1 SV=1; CCR4-NOT transcription complex subunit 10 OS=Mus musculus OX=10090 GN=Cnot10 PE=1 SV=1; Isoform 4 of CCR4-NOT transcription complex subunit 10 OS=Mus musculus OX=10090 GN=Cnot10; CCR4-NOT transcription complex subunit 10 OS=Mus musculus OX=10090 GN=Cnot10 PE=1 SV=1; Isoform 5 of CCR4-NOT transcription complex subunit 10 OS=Mus musculus OX=10090 GN=Cnot10; Isoform 3 of CCR4-NOT transcription complex subunit 10 OS=Mus musculus OX=10090 GN=Cnot10; Isoform 2 of CCR4-NOT transcription complex subunit 10 OS=Mus musculus OX=10090 GN=Cnot10; CCR4-NOT transcription complex subunit 10 OS=Mus musculus OX=10090 GN=Cnot10 PE=1 SV=1; CCR4-NOT transcription complex subunit 10 OS=Mus musculus OX=10090 GN=Cnot10 PE=1 SV=1 0 2 2 0.6835 0 1 1 1 703.36499 1405.7227 1405.72329 -0.41 -0.00029 0/0 0 0 4606216.5 HCD 30 MS2 0 125 110 36.1382 8194 8194 8186 QEplus033719.raw F4 125.8 114.1 135.2 96.2 150.3 128.3 221 3.57 1 FALSE 1.14E-05 1.03E-06 1.235 -250 24985 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQEEELRR [R].eQEEELRR.[L] N-Term(TMT6plex) 4 Q3UMU9 Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2 PE=1 SV=1 Q3UMU9-4; Q3UMU9-3; Q3UMU9-2; Q3UMU9 Isoform 4 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Isoform 3 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Isoform 2 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2 PE=1 SV=1 1 2 2 0.0522 0 1 1 1 659.35193 1317.69658 1317.69601 0.43 0.00029 0/0 0 0 2113371.75 HCD 30 MS2 0 101.2 110 36.1407 8195 8195 8186 QEplus033719.raw F4 112.1 89.9 112.7 73.3 114.2 105.2 275 2.3 1 FALSE 1.14E-05 0.0004686 0.728 -250 25004 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MTDQQAEAR [-].mTDQQAEAR.[S] N-Term(TMT6plex) 2 P20801 "Troponin C, skeletal muscle OS=Mus musculus OX=10090 GN=Tnnc2 PE=1 SV=2" P20801; Q3UZY7 "Troponin C, skeletal muscle OS=Mus musculus OX=10090 GN=Tnnc2 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tnnc2 PE=2 SV=1" 0 2 2 0.4765 0 1 1 1 639.81897 1278.63066 1278.63097 -0.24 -0.00015 0/0 0 0 7596205 HCD 30 MS2 13.80348 269.8 110 36.1528 8199 8199 8197 QEplus033719.raw F4 275.7 139.2 339.4 299.4 145.7 419.4 115 3.61 1 FALSE 1.14E-05 5.25E-06 1.101 -250 25011 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSPVTAR [R].tSPVTAR.[T] N-Term(TMT6plex) 3 Q3UI57 DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=1 SV=1 Q3UI57; Q3ULD6; Q3UZH2 DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=2 SV=1 0 2 2 0.375 0 1 1 1 480.78772 960.56816 960.56756 0.63 0.0003 0/0 0 0 16418217 HCD 30 MS2 49.34666 727 80.705 36.1551 8200 8200 8197 QEplus033719.raw F4 775.8 722.3 673.6 475.9 1132.4 582.1 208 1.84 1 FALSE 0.002056 0.03678 0.187 -250 25042 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIMDQR [R].hIMDQR.[S] N-Term(TMT6plex) 3 Q569Z5 Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus OX=10090 GN=Ddx46 PE=1 SV=2 Q569Z5; F8WHR6; Q569Z5-2 Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus OX=10090 GN=Ddx46 PE=1 SV=2; RNA helicase OS=Mus musculus OX=10090 GN=Ddx46 PE=1 SV=1; Isoform 2 of Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus OX=10090 GN=Ddx46 0 2 2 0.5321 0 1 1 1 514.77783 1028.54839 1028.55086 -2.41 -0.00124 0/0 0 0 4465285.5 HCD 30 MS2 0 371.5 110 36.1673 8205 8205 8197 QEplus033719.raw F4 371.1 348.8 401.6 294.3 444.4 368.6 120 2.18 1 FALSE 0.004038 0.07479 0.075 -250 25048 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRSEAEAARR [R].lRSEAEAARR.[A] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 2 3 3 0.3834 0 1 1 1 463.2724 1387.80265 1387.79673 4.27 0.00197 0/0 0 0 3873604.75 HCD 30 MS2 36.86714 270.3 110 36.1698 8206 8206 8197 QEplus033719.raw F4 297.8 214.9 271 194.2 366.4 277.6 334 3.26 2 FALSE 0.001955 0.03384 0.199 -250 25078 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGPPGPAGPEGR [K].rGPPGPAGPEGR.[Q] N-Term(TMT6plex) 2 B1AWB9; O88207-2 "Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1;Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1" B1AWB9; O88207-2 "Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1; Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1" 1 3 3 0.6828 0 1 1 1 459.59143 1376.75974 1376.75961 0.09 0.00004 0/0 0 0 27459640 HCD 30 MS2 14.10122 267.7 43.936 36.1844 8211 8211 8208 QEplus033719.raw F4 286.9 200.5 261.7 223 384.2 249.9 396 5.17 2 FALSE 1.14E-05 3.38E-14 2.656 -250 25085 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPSAPAPR [R].gPSAPAPR.[V] N-Term(TMT6plex) 4 Q3TIB7 Gamma-tubulin complex component OS=Mus musculus OX=10090 GN=Tubgcp2 PE=2 SV=1 Q3TIB7; A0A1B0GR08; Q3UIT6; Q921G8 Gamma-tubulin complex component OS=Mus musculus OX=10090 GN=Tubgcp2 PE=2 SV=1; Gamma-tubulin complex component (Fragment) OS=Mus musculus OX=10090 GN=Tubgcp2 PE=1 SV=1; Gamma-tubulin complex component OS=Mus musculus OX=10090 GN=Tubgcp2 PE=2 SV=1; Gamma-tubulin complex component 2 OS=Mus musculus OX=10090 GN=Tubgcp2 PE=1 SV=2 0 2 2 0.2251 0 1 1 1 491.28757 981.56786 981.5679 -0.04 -0.00002 0/0 0 0 15591261 HCD 30 MS2 3.183942 673.4 106.088 36.1868 8212 8212 8208 QEplus033719.raw F4 798 311.8 476.4 1343 506.5 605 68 1.91 1 FALSE 0.002981 0.05799 0.119 -250 25099 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSLLEHSR [R].hSLLEHSR.[E] N-Term(TMT6plex) 3 Q7TPV4 Myb-binding protein 1A OS=Mus musculus OX=10090 GN=Mybbp1a PE=1 SV=2 A0JLT5; Q3TLF6; Q7TPV4 Mybbp1a protein (Fragment) OS=Mus musculus OX=10090 GN=Mybbp1a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mybbp1a PE=2 SV=1; Myb-binding protein 1A OS=Mus musculus OX=10090 GN=Mybbp1a PE=1 SV=2 0 3 3 0.6083 0 1 1 1 403.23038 1207.67658 1207.67449 1.73 0.0007 0/0 0 0 11317955 HCD 30 MS2 50.99916 314 77.088 36.1915 8214 8214 8208 QEplus033719.raw F4 401.9 242.6 315.8 289.7 330.4 303.4 380 4.57 1 FALSE 1.14E-05 1.64E-06 1.196 -250 25108 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQNAEQIR [R].dQNAEQIR.[L] N-Term(TMT6plex) 2 Q80YG4 SEC63 OS=Mus musculus OX=10090 GN=Sec63 PE=2 SV=1 Q80YG4; Q8VHE0 SEC63 OS=Mus musculus OX=10090 GN=Sec63 PE=2 SV=1; Translocation protein SEC63 homolog OS=Mus musculus OX=10090 GN=Sec63 PE=1 SV=4 0 2 2 0.6151 0 1 1 1 601.81934 1202.6314 1202.63268 -1.07 -0.00064 0/0 0 0 8378937 HCD 30 MS2 8.313413 456.8 110 36.1941 8215 8215 8208 QEplus033719.raw F4 454.4 438.5 487.2 366.5 567.8 426.6 174 3.04 1 FALSE 1.14E-05 0.0001348 0.832 -250 25114 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSAITQR [K].dSAITQR.[Y] N-Term(TMT6plex) 4 A0A0R4J1Y3 Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Mus musculus OX=10090 GN=Osgep PE=1 SV=1 A0A0R4J1Y3; Q58EU1; E0CYN9; Q3UQ67 Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Mus musculus OX=10090 GN=Osgep PE=1 SV=1; Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Mus musculus OX=10090 GN=Osgep PE=2 SV=1; N6-L-threonylcarbamoyladenine synthase OS=Mus musculus OX=10090 GN=Osgep PE=1 SV=1; Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Mus musculus OX=10090 GN=Osgep PE=2 SV=1 0 2 2 0.3333 0 1 1 1 510.28824 1019.5692 1019.56829 0.89 0.00046 0/0 0 0 8228903.5 HCD 30 MS2 32.39953 600.9 110 36.1966 8216 8216 8208 QEplus033719.raw F4 641.7 512.4 569.9 517.3 786.3 577.9 291 2.52 1 FALSE 0.0002814 0.005683 0.485 -250 25137 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VPSQEDSR [R].vPSQEDSR.[A] N-Term(TMT6plex) 1 Q9JIG7 Coiled-coil domain-containing protein 22 OS=Mus musculus OX=10090 GN=Ccdc22 PE=1 SV=1 Q9JIG7 Coiled-coil domain-containing protein 22 OS=Mus musculus OX=10090 GN=Ccdc22 PE=1 SV=1 0 2 2 0.6627 0 1 1 1 573.8009 1146.59453 1146.59523 -0.61 -0.00035 0/0 0 0 9549751 HCD 30 MS2 0 315.9 110 36.2089 8220 8220 8219 QEplus033719.raw F4 320.5 253.7 324.2 280.4 360 356.6 153 2.49 1 FALSE 1.14E-05 0.0001677 0.814 -250 25147 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DREIMR [K].dREIMR.[H] N-Term(TMT6plex) 6 D3YUM1 "NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1" D3YXX5; D3Z1U9; D3Z0K1; D3YUM1; Q91YT0; A0A494BAS8 "NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1; NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1; NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1; NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1; NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1; NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1" 1 3 3 0.3206 0 1 1 1 350.19745 1048.57779 1048.57708 0.68 0.00024 0/0 0 0 13223553 HCD 30 MS2 12.52843 447.7 93.482 36.2159 8223 8223 8219 QEplus033719.raw F4 530.7 309.1 432.1 475 424.7 514.5 226 2.62 1 FALSE 0.002413 0.04802 0.148 -250 25163 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAGNQNFR [R].aAGNQNFR.[N] N-Term(TMT6plex) 1 Q9CYG7 Mitochondrial import receptor subunit TOM34 OS=Mus musculus OX=10090 GN=Tomm34 PE=1 SV=1 Q9CYG7 Mitochondrial import receptor subunit TOM34 OS=Mus musculus OX=10090 GN=Tomm34 PE=1 SV=1 0 2 2 0.6345 0 1 1 1 553.79889 1106.5905 1106.59042 0.07 0.00004 0/0 0 0 6442159.5 HCD 30 MS2 11.47688 532.2 110 36.2207 8225 8225 8219 QEplus033719.raw F4 528.3 400.3 527.5 521.5 522.1 693.7 232 2.9 1 FALSE 1.14E-05 0.000417 0.738 -250 25172 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YASSVR [K].yASSVR.[S] N-Term(TMT6plex) 7 Q99LF8 Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1 Q99LF8; Q3TUS5; Q91YZ8; A3KFU5; Q3TSA5; A3KFU8; Q6PHQ9 Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; PABC domain-containing protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; PABC domain-containing protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1 0 2 2 0.3204 0 1 1 1 456.26169 911.5161 911.5148 1.43 0.00065 0/0 0 0 5398034 HCD 30 MS2 39.14369 553.6 110 36.2232 8226 8226 8219 QEplus033719.raw F4 566.1 339.8 638.7 538.3 576.7 662 33 2.06 1 FALSE 0.003608 0.0691 0.09 -250 25180 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FGGPVHHQAQR [R].fGGPVHHQAQR.[F] N-Term(TMT6plex) 7 Q8BM84 ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1 Q3TT05; Q3UFF9; Q8BTQ1; Q8BM84; P70372; Q8BVF8; Q8BW03 ELAV-like protein (Fragment) OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein (Fragment) OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein 1 OS=Mus musculus OX=10090 GN=Elavl1 PE=1 SV=2; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1 0 3 3 0.7618 0 1 1 1 488.2663 1462.78434 1462.7865 -1.48 -0.00072 0/0 0 0 4726009 HCD 30 MS2 30.65228 311.1 110 36.2257 8227 8227 8219 QEplus033719.raw F4 338.2 260.5 327.8 245.7 367.3 326.9 320 5.5 1 FALSE 1.14E-05 3.34E-12 2.277 -250 25199 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRLEAEAGR [K].qRLEAEAGR.[F] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.4764 0 1 1 1 629.85651 1258.70574 1258.70651 -0.62 -0.00039 0/0 0 0 9422753 HCD 30 MS2 15.45398 207.1 110 36.2307 8229 8229 8219 QEplus033719.raw F4 219.1 198.1 226.8 180.6 210.3 207.7 380 2.75 2 FALSE 1.14E-05 0.0004437 0.732 -250 25213 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGSGGSYGGGGSGGGYGGGSGSR [R].gGSGGSYGGGGSGGGYGGGSGSR.[G] N-Term(TMT6plex) 1 P35527 "SWISS-PROT:P35527 Tax_Id=9606 Gene_Symbol=KRT9 Keratin, type I cytoskeletal 9" P35527 "SWISS-PROT:P35527 Tax_Id=9606 Gene_Symbol=KRT9 Keratin, type I cytoskeletal 9" 0 3 3 0.8918 0 1 1 1 674.30328 2020.8953 2020.89064 2.31 0.00155 0/0 0 0 7436298 HCD 30 MS2 0 80.8 110 36.2405 8232 8232 8230 QEplus033719.raw F4 79 77.3 71.3 80.2 96.5 80.3 12 7.58 1 TRUE 1.14E-05 6.31E-16 3.946 -250 25216 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAGEASR [R].iAGEASR.[L] N-Term(TMT6plex) 4 Q64525 Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64525; P10854; Q64478; Q6ZWY9 Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3 0 2 2 0.1625 0 1 1 1 466.77243 932.53758 932.53626 1.42 0.00066 0/0 0 0 668248896 HCD 30 MS2 2.982634 561.5 2.097 36.2428 8233 8233 8230 QEplus033719.raw F4 653.3 625.2 586.5 380.6 771.4 351.8 216 2.4 1 FALSE 0.001134 0.01515 0.331 -250 25221 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSETGENIR [K].dSETGENIR.[Q] N-Term(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 0 2 2 0.7327 0 1 1 1 625.31525 1249.62322 1249.62217 0.83 0.00052 0/0 0 0 100055224 HCD 30 MS2 2.921006 445.5 21.819 36.245 8234 8234 8230 QEplus033719.raw F4 459.7 299 512.2 448.9 391 561.9 113 3.33 1 FALSE 1.14E-05 2.11E-05 0.986 -250 25227 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPDTIRR [R].tPDTIRR.[F] N-Term(TMT6plex) 5 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 Q80U89; Q68FD5; Q5SXR6; Q3U0H2; Q3TYQ2 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; Clathrin-link domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1; Clathrin-link domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1 1 3 3 0.1801 0 1 1 1 363.21915 1087.64289 1087.64212 0.7 0.00025 0/0 0 0 51143848 HCD 30 MS2 14.99316 370.5 19.651 36.2473 8235 8235 8230 QEplus033719.raw F4 403.8 306.7 370.2 271.9 524.9 345.3 257 2.72 1 FALSE 0.0002019 0.004084 0.525 -250 25240 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MHPQYSR [K].mHPQYSR.[R] N-Term(TMT6plex) 9 G3UVV4 Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1 Q3UE51; Q3TTB4; G3UVV4; Q3TJE3; P17710; P17710-2; P17710-4; Q6GQU1; Q3UPC4 Hexokinase (Fragment) OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase (Fragment) OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=3; Isoform HK1-SB of Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1; Isoform HK1-SC of Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1 0 3 3 0.3957 0 1 1 1 383.20099 1147.58841 1147.58798 0.38 0.00014 0/0 0 0 18599396 HCD 30 MS2 24.19225 301.7 72.168 36.2518 8237 8237 8230 QEplus033719.raw F4 303.7 244.4 350.7 304.1 301.8 305.4 175 2.78 1 FALSE 0.002853 0.05592 0.125 -250 25255 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MTEEECR [K].mTEEEcR.[G] N-Term(TMT6plex); C6(Carbamidomethyl) 8 Q02789 Voltage-dependent L-type calcium channel subunit alpha-1S OS=Mus musculus OX=10090 GN=Cacna1s PE=1 SV=2 Q02789; E9QPX8; Q02789-2; Q3UQQ0; E9Q7B5; F7CNJ1; F8VQE0; Q3UPG8 Voltage-dependent L-type calcium channel subunit alpha-1S OS=Mus musculus OX=10090 GN=Cacna1s PE=1 SV=2; Voltage-dependent L-type calcium channel subunit alpha OS=Mus musculus OX=10090 GN=Cacna1s PE=1 SV=1; Isoform 2 of Voltage-dependent L-type calcium channel subunit alpha-1S OS=Mus musculus OX=10090 GN=Cacna1s; Voltage-dependent L-type calcium channel subunit alpha OS=Mus musculus OX=10090 GN=Cacna1s PE=2 SV=1; Voltage-dependent L-type calcium channel subunit alpha OS=Mus musculus OX=10090 GN=Cacna1s PE=1 SV=1; Voltage-dependent L-type calcium channel subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Cacna1s PE=1 SV=1; Voltage-dependent L-type calcium channel subunit alpha OS=Mus musculus OX=10090 GN=Cacna1s PE=1 SV=1; Voltage-dependent L-type calcium channel subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Cacna1s PE=2 SV=1 0 2 2 0.7354 0 1 1 1 592.2677 1183.52812 1183.52847 -0.3 -0.00018 0/0 0 0 4906101.5 HCD 30 MS2 36.92747 401.1 110 36.2568 8239 8239 8230 QEplus033719.raw F4 489.7 175.9 340.4 574 270.1 556.8 20 2.23 1 FALSE 0.001886 0.03187 0.208 -250 25271 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCCIGCR [R].nccIGcR.[S] N-Term(TMT6plex); C2(Carbamidomethyl); C3(Carbamidomethyl); C6(Carbamidomethyl) 3 Q8C2N0 DNA polymerase OS=Mus musculus OX=10090 GN=Pold1 PE=2 SV=1 Q8C2N0; Q91VT0; P52431 DNA polymerase OS=Mus musculus OX=10090 GN=Pold1 PE=2 SV=1; DNA polymerase OS=Mus musculus OX=10090 GN=Pold1 PE=2 SV=1; DNA polymerase delta catalytic subunit OS=Mus musculus OX=10090 GN=Pold1 PE=1 SV=2 0 2 2 0.5142 0 1 1 1 584.7644 1168.52153 1168.52228 -0.64 -0.00038 0/0 0 0 3144184 HCD 30 MS2 24.37982 179.3 110 36.2666 8242 8242 8241 QEplus033719.raw F4 184.1 197 163.8 109.4 276 145.3 17 2.82 1 FALSE 0.001903 0.03235 0.205 -250 25276 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEGDDGPDVR [K].qEGDDGPDVR.[G] N-Term(TMT6plex) 7 Q3UHC1 Rap guanine nucleotide exchange factor (GEF) 1 OS=Mus musculus OX=10090 GN=Rapgef1 PE=1 SV=1 Q3UHC1; Q3UGX8; F6ZDE5; Q91ZZ2; A0A5F8MPI9; A1L338; Q8C5V7 Rap guanine nucleotide exchange factor (GEF) 1 OS=Mus musculus OX=10090 GN=Rapgef1 PE=1 SV=1; Rap guanine nucleotide exchange factor (GEF) 1 OS=Mus musculus OX=10090 GN=Rapgef1 PE=1 SV=1; Rap guanine nucleotide exchange factor (GEF) 1 (Fragment) OS=Mus musculus OX=10090 GN=Rapgef1 PE=1 SV=1; Guanine nucleotide exchange factor OS=Mus musculus OX=10090 GN=Rapgef1 PE=1 SV=1; Rap guanine nucleotide exchange factor (GEF) 1 OS=Mus musculus OX=10090 GN=Rapgef1 PE=1 SV=1; Rap guanine nucleotide exchange factor (GEF) 1 OS=Mus musculus OX=10090 GN=Rapgef1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rapgef1 PE=2 SV=1 0 2 2 0.7906 0 1 1 1 658.81726 1316.62724 1316.62799 -0.56 -0.00037 0/0 0 0 1787350.25 HCD 30 MS2 37.26647 140 110 36.2691 8243 8243 8241 QEplus033719.raw F4 176.9 108.1 175.8 95.4 140.4 143.7 47 3.2 1 FALSE 1.14E-05 5.08E-05 0.913 -250 25286 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVAEEAAR [K].qVAEEAAR.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.4665 0 1 1 1 551.80701 1102.60674 1102.6054 1.21 0.00067 0/0 0 0 22484856 HCD 30 MS2 28.97764 810.6 82.549 36.2736 8245 8245 8241 QEplus033719.raw F4 914.2 679.8 785 747.1 931.4 805.9 281 3.28 2 FALSE 1.14E-05 7.19E-05 0.884 -250 25308 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDGDSFR [K].qDGDSFR.[M] N-Term(TMT6plex) 1 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 2 2 0.5576 0 1 1 1 527.26263 1053.51799 1053.51625 1.65 0.00087 0/0 0 0 6538127 HCD 30 MS2 0 548.3 110 36.2831 8249 8249 8241 QEplus033719.raw F4 646.8 364.9 545.7 516.5 562.2 653.9 55 2.78 1 FALSE 0.003405 0.06582 0.099 -250 25335 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FGGPVHHQAQR [R].fGGPVHHQAQR.[F] N-Term(TMT6plex) 7 Q8BM84 ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1 Q3TT05; Q3UFF9; Q8BTQ1; Q8BM84; P70372; Q8BVF8; Q8BW03 ELAV-like protein (Fragment) OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein (Fragment) OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein 1 OS=Mus musculus OX=10090 GN=Elavl1 PE=1 SV=2; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1 0 2 2 0.731 0 1 1 1 731.89893 1462.79057 1462.7865 2.79 0.00204 0/0 0 0 2860630 HCD 30 MS2 0 110.8 110 36.2977 8254 8254 8252 QEplus033719.raw F4 112.5 102.6 129.5 70.7 130.1 119.3 341 4.2 1 FALSE 1.14E-05 6.55E-11 2.032 -250 25344 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQDTSAHLER [K].eQDTSAHLER.[M] N-Term(TMT6plex) 19 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; Q56A77; Q9ESW6; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; B2RWX0; B2RQQ1; Q3UW38; B1AR69; B2RY26; A2AQP0; B2RXX9; M0QWL0; Q3TT35; P13542; Q9JHR4 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myh4 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myosin_tail_1 domain-containing protein OS=Mus musculus OX=10090 GN=Myh13 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-7B OS=Mus musculus OX=10090 GN=Myh7b PE=3 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Myh13 PE=4 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2; Myosin heavy chain IIB (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1" 0 3 3 0.7519 0 1 1 1 472.24173 1414.71064 1414.71239 -1.24 -0.00058 0/0 0 0 46443196 HCD 30 MS2 28.97121 346.9 33.96 36.3 8255 8255 8252 QEplus033719.raw F4 434 127.9 256.1 733.3 194 336 129 5.4 5 FALSE 1.14E-05 3.39E-09 1.706 -250 25367 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TENSTLTR [R].tENSTLTR.[E] N-Term(TMT6plex) 33 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 2 2 0.2949 0 1 1 1 575.81683 1150.62639 1150.62653 -0.12 -0.00007 0/0 0 0 7128978.5 HCD 30 MS2 28.61588 479.6 110 36.3093 8259 8259 8252 QEplus033719.raw F4 472.9 365.4 515.9 450 475 598.3 266 2.95 1 FALSE 1.14E-05 4.82E-05 0.918 -250 25375 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLEEQNAR [K].qLEEQNAR.[L] N-Term(TMT6plex) 9 E9Q586 Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1 E9Q3M3; E9Q586; O08788-2; D3YX34; Q3T9V8; O08788; Q6NZM3; Q3TB96; Q3TRF1 Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Isoform 2 of Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=3; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1; CAP-Gly domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1 0 2 2 0.4882 0 1 1 1 608.83002 1216.65276 1216.64833 3.64 0.00221 0/0 0 0 4696652 HCD 30 MS2 14.146 323.6 110 36.3118 8260 8260 8252 QEplus033719.raw F4 354.4 289.8 321 267.2 402.6 306.6 270 2.97 1 FALSE 1.14E-05 0.0003625 0.75 -250 25383 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQDTSAHLER [K].eQDTSAHLER.[M] N-Term(TMT6plex) 19 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; Q56A77; Q9ESW6; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; B2RWX0; B2RQQ1; Q3UW38; B1AR69; B2RY26; A2AQP0; B2RXX9; M0QWL0; Q3TT35; P13542; Q9JHR4 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myh4 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myosin_tail_1 domain-containing protein OS=Mus musculus OX=10090 GN=Myh13 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-7B OS=Mus musculus OX=10090 GN=Myh7b PE=3 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Myh13 PE=4 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2; Myosin heavy chain IIB (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1" 0 2 2 0.6569 0 1 1 1 707.85992 1414.71257 1414.71239 0.13 0.00009 0/0 0 0 3786342.75 HCD 30 MS2 8.342103 152.5 110 36.3143 8261 8261 8252 QEplus033719.raw F4 217.8 26.4 93.6 417.1 40.7 119.5 127 3.41 5 FALSE 1.14E-05 2.87E-08 1.53 -250 25394 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQGELER [K].dQGELER.[Q] N-Term(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q8VDD5; Q8BIE2 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 0 2 2 0.3373 0 1 1 1 538.28473 1075.56218 1075.55812 3.78 0.00203 0/0 0 0 513401952 HCD 30 MS2 22.98987 452.1 2.265 36.3241 8264 8264 8263 QEplus033719.raw F4 439.6 456.5 496.6 315.5 592.2 412.1 202 2.55 1 FALSE 0.007275 0.1163 -0.034 -250 25403 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAAHHYGAQCDK [K].aAAHHYGAQcDk.[T] N-Term(TMT6plex); C10(Carbamidomethyl); K12(TMT6plex) 2 A0A1S6GWI0 Complex I-19kD OS=Mus musculus OX=10090 GN=Ndufa8 PE=2 SV=1 A0A1S6GWI0; Q9DCJ5 Complex I-19kD OS=Mus musculus OX=10090 GN=Ndufa8 PE=2 SV=1; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Mus musculus OX=10090 GN=Ndufa8 PE=1 SV=3 0 4 4 0.3745 0 1 1 1 447.48193 1786.9059 1786.90591 0 0 0/0 0 0 11282165 HCD 30 MS2 77.14732 407.2 52.301 36.3264 8265 8265 8263 QEplus033719.raw F4 424 283.2 412.4 425 523.6 374.8 199 2.35 1 FALSE 1.14E-05 0.0007146 0.692 -250 25410 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FGGPVHHQAQR [R].fGGPVHHQAQR.[F] N-Term(TMT6plex) 7 Q8BM84 ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1 Q3TT05; Q3UFF9; Q8BTQ1; Q8BM84; P70372; Q8BVF8; Q8BW03 ELAV-like protein (Fragment) OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein (Fragment) OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein 1 OS=Mus musculus OX=10090 GN=Elavl1 PE=1 SV=2; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1 0 4 4 0.7013 0 1 1 1 366.45224 1462.78713 1462.7865 0.43 0.00016 0/0 0 0 65767344 HCD 30 MS2 27.86606 147.3 15.253 36.3286 8266 8266 8263 QEplus033719.raw F4 156 119.4 168.6 111.8 167 161 335 4.52 1 FALSE 1.14E-05 2.16E-08 1.553 -250 25417 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVLHSAR [K].nVLHSAR.[L] N-Term(TMT6plex) 3 P97807 "Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh PE=1 SV=3" H3BKG7; P97807; P97807-2 "Fumarate hydratase 1 (Fragment) OS=Mus musculus OX=10090 GN=Fh1 PE=1 SV=1; Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh PE=1 SV=3; Isoform Cytoplasmic of Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh" 0 2 2 0.6484 0 1 1 1 513.3067 1025.60613 1025.60534 0.76 0.00039 0/0 0 0 21590572 HCD 30 MS2 10.46457 643.7 87.707 36.3309 8267 8267 8263 QEplus033719.raw F4 678.6 479 646.7 726.4 714.7 616.9 62 2.73 1 FALSE 0.00131 0.01801 0.299 -250 25422 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLDQCR [K].dLDQcR.[D] N-Term(TMT6plex); C5(Carbamidomethyl) 2 Q3UF30 Calpactin I light chain OS=Mus musculus OX=10090 GN=S100a10 PE=2 SV=1 Q3UF30; Q3TC45 Calpactin I light chain OS=Mus musculus OX=10090 GN=S100a10 PE=2 SV=1; Calpactin I light chain OS=Mus musculus OX=10090 GN=S100a10 PE=1 SV=1 0 2 2 0.0972 0 1 1 1 518.25787 1035.50847 1035.50906 -0.57 -0.00029 0/0 0 0 12904263 HCD 30 MS2 18.62079 769.7 110 36.3334 8268 8268 8263 QEplus033719.raw F4 814 750.4 789.4 597.5 962.1 704.7 82 2.16 1 FALSE 0.004699 0.0827 0.054 -250 25436 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISRPGDSDDSR [K].iSRPGDSDDSR.[S] N-Term(TMT6plex) 7 G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 G3UY56; Q8R081; G3UY38; Q8BI42; Q3UMT7; G3UYY3; G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 0 3 3 0.6353 0 1 1 1 478.57718 1433.71698 1433.7182 -0.85 -0.00041 0/0 0 0 10274107 HCD 30 MS2 24.30933 497.7 110 36.3381 8270 8270 8263 QEplus033719.raw F4 448.8 459.3 538.6 361.3 718.7 459.5 155 3.51 1 FALSE 6.52E-05 0.002711 0.568 -250 25442 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AESGLSDR [R].aESGLSDR.[K] N-Term(TMT6plex) 1 Q80ZW2 Protein THEM6 OS=Mus musculus OX=10090 GN=Them6 PE=1 SV=1 Q80ZW2 Protein THEM6 OS=Mus musculus OX=10090 GN=Them6 PE=1 SV=1 0 2 2 0.4833 0 1 1 1 532.28259 1063.55791 1063.55812 -0.2 -0.0001 0/0 0 0 8689049 HCD 30 MS2 15.32542 359.2 110 36.3429 8272 8272 8263 QEplus033719.raw F4 366.5 345 344.8 288.1 479.3 331.7 174 2.69 1 FALSE 0.0003408 0.006445 0.469 -250 25454 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTNESLER [RK].gTNESLER.[Q-] N-Term(TMT6plex) 11 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 P03995; A0MTM0; A0A0A6YWC8; Q3TWV0; P03995-2; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Glial fibrillary acidic protein OS=Mus musculus OX=10090 GN=Gfap PE=1 SV=4; Glial fibrillary acidic protein (Fragment) OS=Mus musculus OX=10090 GN=Gfap PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Isoform 2 of Glial fibrillary acidic protein OS=Mus musculus OX=10090 GN=Gfap; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.3129 0 1 1 1 567.8017 1134.59612 1134.59523 0.78 0.00044 0/0 0 0 234693472 HCD 30 MS2 2.630979 341.2 5.467 36.3524 8275 8275 8274 QEplus033719.raw F4 337.6 352 364.3 235.5 463.3 294.6 226 3.1 2 FALSE 1.14E-05 0.0005239 0.718 -250 25463 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QESLQER [R].qESLQER.[K] N-Term(TMT6plex) 4 I6L970 Aup1 protein OS=Mus musculus OX=10090 GN=Aup1 PE=2 SV=1 I6L970; Q3TAZ9; Q3U3K9; Q3TBX5 Aup1 protein OS=Mus musculus OX=10090 GN=Aup1 PE=2 SV=1; CUE domain-containing protein OS=Mus musculus OX=10090 GN=Aup1 PE=2 SV=1; Lipid droplet-regulating VLDL assembly factor AUP1 OS=Mus musculus OX=10090 GN=Aup1 PE=1 SV=1; CUE domain-containing protein OS=Mus musculus OX=10090 GN=Aup1 PE=2 SV=1 0 2 2 0.2435 0 1 1 1 559.80341 1118.59953 1118.60032 -0.7 -0.00039 0/0 0 0 6086186.5 HCD 30 MS2 0 308.4 110 36.3549 8276 8276 8274 QEplus033719.raw F4 304.1 260 310.9 267.3 347.4 361 254 2.71 1 FALSE 0.0002419 0.004879 0.504 -250 25471 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EREAELGAR [K].eREAELGAR.[A] N-Term(TMT6plex) 4 P29341 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2 P29341; Q3U8U8; Q8BN32; Q99KL3 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1 1 3 3 0.4181 0 1 1 1 420.57037 1259.69657 1259.69053 4.79 0.00201 0/0 0 0 145089696 HCD 30 MS2 37.89172 231.7 5.376 36.3571 8277 8277 8274 QEplus033719.raw F4 219.7 207.2 264.2 189.4 260.8 248.9 310 3.54 1 FALSE 1.14E-05 1.31E-05 1.025 -250 25477 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YGGSVGSR [K].yGGSVGSR.[S] N-Term(TMT6plex) 2 A0A498WFS2 UBX domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ubxn1 PE=1 SV=1 A0A498WFS2; Q922Y1 UBX domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ubxn1 PE=1 SV=1; UBX domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ubxn1 PE=1 SV=1 0 2 2 0.6047 0 1 1 1 506.27512 1011.54296 1011.54207 0.87 0.00044 0/0 0 0 10054646 HCD 30 MS2 37.77821 706.9 110 36.3596 8278 8278 8274 QEplus033719.raw F4 764.2 588.4 728 611.6 831.5 717.8 97 2.58 1 FALSE 0.002071 0.03857 0.18 -250 25484 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTEGLR [R].dTEGLR.[E] N-Term(TMT6plex) 2 O35082 Klotho OS=Mus musculus OX=10090 GN=Kl PE=1 SV=2 O35082-2; O35082 Isoform 2 of Klotho OS=Mus musculus OX=10090 GN=Kl; Klotho OS=Mus musculus OX=10090 GN=Kl PE=1 SV=2 0 2 2 0.133 0 1 1 1 460.25757 919.50786 919.50463 3.52 0.00162 0/0 0 0 8763633 HCD 30 MS2 43.85782 696.6 110 36.3621 8279 8279 8274 QEplus033719.raw F4 781.7 492.9 784.8 835.1 596.4 688.9 181 2.18 1 FALSE 0.005381 0.0917 0.03 -250 25492 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANSQDSLASR [R].aNSQDSLASR.[D] N-Term(TMT6plex) 3 B2RWW1 Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=2 SV=1 B2RWW1; A0A1D5RLY6; Q8C052 Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=2 SV=1; Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=1 SV=1; Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=1 SV=2 0 2 2 0.5656 0 1 1 1 639.33685 1277.66643 1277.66471 1.35 0.00086 0/0 0 0 4500996 HCD 30 MS2 12.10031 220.9 110 36.3647 8280 8280 8274 QEplus033719.raw F4 214.6 186.7 259.7 178 221.5 264.9 236 3.66 1 FALSE 1.14E-05 2.05E-05 0.988 -250 25498 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISRPGDSDDSR [K].iSRPGDSDDSR.[S] N-Term(TMT6plex) 7 G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 G3UY56; Q8R081; G3UY38; Q8BI42; Q3UMT7; G3UYY3; G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 0 2 2 0.6278 0 1 1 1 717.36359 1433.7199 1433.7182 1.18 0.00085 0/0 0 0 2286239.75 HCD 30 MS2 0 28.9 110 36.3672 8281 8281 8274 QEplus033719.raw F4 24.8 31.9 36.4 24 29.1 27.1 156 3.17 1 FALSE 1.14E-05 5.68E-06 1.094 -250 25505 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGSGGSYGGGGSGGGYGGGSGSR [R].gGSGGSYGGGGSGGGYGGGSGSR.[G] N-Term(TMT6plex) 1 P35527 "SWISS-PROT:P35527 Tax_Id=9606 Gene_Symbol=KRT9 Keratin, type I cytoskeletal 9" P35527 "SWISS-PROT:P35527 Tax_Id=9606 Gene_Symbol=KRT9 Keratin, type I cytoskeletal 9" 0 2 2 0.9672 0 1 1 1 1010.94971 2020.89214 2020.89064 0.74 0.00075 0/0 0 0 1787730.25 HCD 30 MS2 0 39.6 110 36.3697 8282 8282 8274 QEplus033719.raw F4 30.6 51.4 24 55.2 46.3 30.2 12 5.19 1 TRUE 1.14E-05 6.31E-16 4.351 -250 25514 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGAAGLGGGGSR [R].sGAAGLGGGGSR.[S] N-Term(TMT6plex) 1 S4R1M9 Oxysterol-binding protein-related protein 10 OS=Mus musculus OX=10090 GN=Osbpl10 PE=1 SV=1 S4R1M9 Oxysterol-binding protein-related protein 10 OS=Mus musculus OX=10090 GN=Osbpl10 PE=1 SV=1 0 2 2 0.4792 0 1 1 1 588.32031 1175.63335 1175.63301 0.28 0.00017 0/0 0 0 1290566.625 HCD 30 MS2 0 120.5 110 36.3747 8284 8284 8274 QEplus033719.raw F4 131.9 109.6 127.6 100.6 132.4 121 267 2.88 1 FALSE 1.14E-05 2.75E-07 1.344 -250 25540 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EREAELGAR [K].eREAELGAR.[A] N-Term(TMT6plex) 4 P29341 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2 P29341; Q3U8U8; Q8BN32; Q99KL3 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1 1 2 2 0.3247 0 1 1 1 630.34918 1259.69109 1259.69053 0.44 0.00028 0/0 0 0 22512058 HCD 30 MS2 33.5324 278.1 91.296 36.3916 8289 8289 8287 QEplus033719.raw F4 266.1 258.8 300.9 228.1 308 307 358 2.31 1 FALSE 1.14E-05 0.000393 0.743 -250 25545 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQGELER [K].dQGELER.[Q] N-Term(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q8VDD5; Q8BIE2 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 0 2 2 0.3536 0 1 1 1 538.28345 1075.55962 1075.55812 1.39 0.00075 0/0 0 0 686048832 HCD 30 MS2 5.442568 404.4 2.009 36.3939 8290 8290 8287 QEplus033719.raw F4 385.6 419.2 459.9 268.7 520.1 372.7 216 2.63 1 FALSE 0.00819 0.1393 -0.073 -250 25574 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERHCGELK [K].eRHcGELk.[R] N-Term(TMT6plex); C4(Carbamidomethyl); K8(TMT6plex) 8 A2AUD5 Tumor protein D54 OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1 F6VQ81; A2AUD5; Q9CZ22; V9GWU5; Q9CYZ2; Q8BKP1; Q3TAI4; Q3TUJ9 Tumor protein D54 (Fragment) OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1; Tumor protein D54 OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpd52l2 PE=2 SV=1; Tumor protein D54 (Fragment) OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=8; Tumor protein D54 OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1; Tumor protein D54 OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1; Tumor protein D54 OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1; Tumor protein D54 OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1 1 3 3 0.4198 0 1 1 1 496.27921 1486.82306 1486.82005 2.02 0.001 0/0 0 0 4428219 HCD 30 MS2 0 473.1 110 36.4032 8294 8294 8287 QEplus033719.raw F4 640.6 318.2 465 508.5 494.9 411.7 363 2.43 1 FALSE 0.001514 0.02289 0.258 -250 25581 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HNLCGETEEER [K].hNLcGETEEER.[I] N-Term(TMT6plex); C4(Carbamidomethyl) 13 D3YX76 Glutathione S-transferase OS=Mus musculus OX=10090 GN=Gstm2 PE=1 SV=1 G5E8M7; D3YZ29; D3YVP6; D3YX76; Q9D5J8; P15626; E9QAC8; Q6PJ91; P19639; O35660; D3YVP9; D3YVP5; Q80W21 Glutathione transferase OS=Mus musculus OX=10090 GN=Gstm6 PE=1 SV=1; Glutathione S-transferase Mu 7 (Fragment) OS=Mus musculus OX=10090 GN=Gstm7 PE=1 SV=1; Glutathione S-transferase Mu 7 OS=Mus musculus OX=10090 GN=Gstm7 PE=1 SV=2; Glutathione S-transferase OS=Mus musculus OX=10090 GN=Gstm2 PE=1 SV=1; Glutathione transferase OS=Mus musculus OX=10090 GN=Gstm6 PE=2 SV=1; Glutathione S-transferase Mu 2 OS=Mus musculus OX=10090 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Mu 7 (Fragment) OS=Mus musculus OX=10090 GN=Gstm7 PE=1 SV=1; Glutathione transferase OS=Mus musculus OX=10090 GN=Gstm7 PE=2 SV=1; Glutathione S-transferase Mu 3 OS=Mus musculus OX=10090 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 6 OS=Mus musculus OX=10090 GN=Gstm6 PE=1 SV=4; Glutathione S-transferase (Fragment) OS=Mus musculus OX=10090 GN=Gstm6 PE=1 SV=1; Glutathione transferase OS=Mus musculus OX=10090 GN=Gstm7 PE=1 SV=1; Glutathione S-transferase Mu 7 OS=Mus musculus OX=10090 GN=Gstm7 PE=1 SV=1 0 3 3 0.7199 0 1 1 1 534.91864 1602.74137 1602.73795 2.13 0.00114 0/0 0 0 4686649 HCD 30 MS2 32.86984 175.4 110 36.4057 8295 8295 8287 QEplus033719.raw F4 209.1 120.3 178.1 129.3 234.3 181.3 44 3.82 1 FALSE 1.14E-05 4.89E-08 1.486 -250 25599 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGVSVR [K].gGVSVR.[L] N-Term(TMT6plex) 5 A0A075B6D7 Inositol-polyphosphate 5-phosphatase OS=Mus musculus OX=10090 GN=Inpp5j PE=1 SV=1 A0A075B6D7; A0PJC0; V9GXL7; Q3TBW1; P59644 "Inositol-polyphosphate 5-phosphatase OS=Mus musculus OX=10090 GN=Inpp5j PE=1 SV=1; Inositol-polyphosphate 5-phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Inpp5j PE=2 SV=1; Inositol-polyphosphate 5-phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Inpp5j PE=1 SV=1; Inositol-polyphosphate 5-phosphatase OS=Mus musculus OX=10090 GN=Inpp5j PE=2 SV=1; Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A OS=Mus musculus OX=10090 GN=Inpp5j PE=1 SV=2" 0 2 2 0.2132 0 1 1 1 402.25067 803.49407 803.49367 0.5 0.0002 0/0 0 0 11393397 HCD 30 MS2 61.90319 584.3 81.798 36.4104 8297 8297 8287 QEplus033719.raw F4 955.4 339.1 524 611 617.1 459.3 41 1.97 1 FALSE 0.003321 0.06446 0.102 -250 25609 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQPLYR [R].rQPLYR.[F] N-Term(TMT6plex) 5 Q69ZP5 MKIAA1181 protein (Fragment) OS=Mus musculus OX=10090 GN=Ergic1 PE=2 SV=1 Q69ZP5; A0A494BAK4; Q4FK22; F6SLP4; A0A494BAW5 MKIAA1181 protein (Fragment) OS=Mus musculus OX=10090 GN=Ergic1 PE=2 SV=1; Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Mus musculus OX=10090 GN=Ergic1 PE=1 SV=1; 1200007D18Rik protein OS=Mus musculus OX=10090 GN=Ergic1 PE=1 SV=1; Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Mus musculus OX=10090 GN=Ergic1 PE=1 SV=2; Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Mus musculus OX=10090 GN=Ergic1 PE=1 SV=1 1 3 3 0.3416 0 1 1 1 354.552 1061.64145 1061.64173 -0.26 -0.00009 0/0 0 0 5309614.5 HCD 30 MS2 66.32783 230 110 36.4177 8299 8299 8298 QEplus033719.raw F4 320.6 169.3 219.3 199.1 213.7 257.9 176 2.81 1 FALSE 0.001719 0.02897 0.222 -250 25620 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSEDTIR [K].tSEDTIR.[L] N-Term(TMT6plex) 1 Q9D6S7 "Ribosome-recycling factor, mitochondrial OS=Mus musculus OX=10090 GN=Mrrf PE=1 SV=1" Q9D6S7 "Ribosome-recycling factor, mitochondrial OS=Mus musculus OX=10090 GN=Mrrf PE=1 SV=1" 0 2 2 0.3908 0 1 1 1 525.78534 1050.5634 1050.56287 0.51 0.00027 0/0 0 0 17657998 HCD 30 MS2 14.06754 655.1 110 36.425 8302 8302 8298 QEplus033719.raw F4 661.4 475.8 694.8 721.6 646.7 730.2 153 2.38 1 FALSE 0.001335 0.01845 0.295 -250 25638 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNDSLAAR [K].dNDSLAAR.[L] N-Term(TMT6plex) 5 Q3TWN8 Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1 Q3TWN8; Q3UZ27; Q9Z110; Q9Z110-2; Q3UGW8 Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1; Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=1 SV=2; Isoform Short of Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1; Gamma-glutamyl kinase (Fragment) OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1 0 2 2 0.4807 0 1 1 1 545.78772 1090.56816 1090.56902 -0.78 -0.00043 0/0 0 0 7936745 HCD 30 MS2 62.13798 753.9 110 36.4325 8305 8305 8298 QEplus033719.raw F4 805.4 632.2 817 641.3 850.5 776.9 190 2.85 1 FALSE 1.14E-05 8.87E-05 0.867 -250 25662 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YNGGVGR [R].yNGGVGR.[C] N-Term(TMT6plex) 5 Q80V08 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1 Q80V08; Q9CPR4; Q6ZWZ7; Q6PHZ1; Q505B1 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=1 SV=3; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=1 SV=1; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1; 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1 0 2 2 0.291 0 1 1 1 476.26288 951.51848 951.52095 -2.59 -0.00123 0/0 0 0 5355849.5 HCD 30 MS2 54.91909 571.8 110 36.4399 8308 8308 8298 QEplus033719.raw F4 672.9 471.4 564.9 483.3 668 570.1 140 1.89 1 FALSE 0.002343 0.04682 0.152 -250 25670 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITCTSR [R].iTcTSR.[N] N-Term(TMT6plex); C3(Carbamidomethyl) 14 P11276; A0A087WSN6; A0A087WQW8; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; B9EHT6; A0A087WR50; Q3UGY5; Q4KL80; A0A087WSN6; A0A087WQW8; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.375 0 1 1 1 483.76563 966.52397 966.52398 -0.01 0 0/0 0 0 230813872 HCD 30 MS2 2.496753 436.4 5.847 36.4472 8310 8310 8309 QEplus033719.raw F4 374.5 353.1 576.5 628.2 254 431.9 110 2.32 4 FALSE 0.007237 0.1151 -0.032 -250 25678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPGNQTPSPR [R].tPGNQTPSPR.[N] N-Term(TMT6plex) 2 Q8R4Z6 RNA helicase OS=Mus musculus OX=10090 GN=Ddx20 PE=2 SV=1 Q8R4Z6; Q9JJY4 RNA helicase OS=Mus musculus OX=10090 GN=Ddx20 PE=2 SV=1; Probable ATP-dependent RNA helicase DDX20 OS=Mus musculus OX=10090 GN=Ddx20 PE=1 SV=2 0 2 2 0.6047 0 1 1 1 642.34937 1283.69145 1283.69053 0.72 0.00046 0/0 0 0 2683453.75 HCD 30 MS2 59.65014 141 110 36.4497 8311 8311 8309 QEplus033719.raw F4 145.2 112.1 143.8 111.4 182.4 151.1 231 2.58 1 FALSE 1.14E-05 0.0003396 0.755 -250 25695 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPHSFQSR [K].ePHSFQSR.[L] N-Term(TMT6plex) 4 Q9JK81 MYG1 exonuclease OS=Mus musculus OX=10090 GN=Myg1 PE=1 SV=1 Q8R038; F8WGG3; F7A3N3; Q9JK81 Melanocyte proliferating gene 1 OS=Mus musculus OX=10090 GN=Myg1 PE=2 SV=1; MYG1 exonuclease (Fragment) OS=Mus musculus OX=10090 GN=Myg1 PE=1 SV=1; MYG1 exonuclease (Fragment) OS=Mus musculus OX=10090 GN=Myg1 PE=1 SV=1; MYG1 exonuclease OS=Mus musculus OX=10090 GN=Myg1 PE=1 SV=1 0 3 3 0.5682 0 1 1 1 406.21387 1216.62705 1216.6272 -0.13 -0.00005 0/0 0 0 28045552 HCD 30 MS2 41.28832 248.1 32.932 36.4542 8313 8313 8309 QEplus033719.raw F4 283 188.2 269.1 287 252.1 209.3 152 3.08 1 FALSE 1.14E-05 0.0007571 0.687 -250 25710 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADEPMEH [K].aDEPMEH.[-] N-Term(TMT6plex) 3 Q3TS44 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 A0A1B0GS70; Q8BTU5; Q3TS44 Proteasome subunit alpha type-1 OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 0 2 2 0.9478 0 1 1 1 529.24451 1057.48174 1057.48218 -0.42 -0.00022 0/0 0 0 7053673.5 HCD 30 MS2 0 287.2 110 36.464 8317 8317 8309 QEplus033719.raw F4 324.1 211.1 273.9 258.5 349.5 306.1 11 2.68 1 FALSE 0.001343 0.01889 0.291 -250 25724 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPGNQTPSPR [R].tPGNQTPSPR.[N] N-Term(TMT6plex) 2 Q8R4Z6 RNA helicase OS=Mus musculus OX=10090 GN=Ddx20 PE=2 SV=1 Q8R4Z6; Q9JJY4 RNA helicase OS=Mus musculus OX=10090 GN=Ddx20 PE=2 SV=1; Probable ATP-dependent RNA helicase DDX20 OS=Mus musculus OX=10090 GN=Ddx20 PE=1 SV=2 0 2 2 0.5765 0 1 1 1 642.34979 1283.69231 1283.69053 1.39 0.00089 0/0 0 0 4478168.5 HCD 30 MS2 17.03998 201.3 110 36.4763 8321 8321 8320 QEplus033719.raw F4 209.2 161.5 218.7 145.2 256.4 216.6 217 2.81 1 FALSE 0.0002814 0.005757 0.484 -250 25730 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HNLCGETEEER [K].hNLcGETEEER.[I] N-Term(TMT6plex); C4(Carbamidomethyl) 13 D3YX76 Glutathione S-transferase OS=Mus musculus OX=10090 GN=Gstm2 PE=1 SV=1 G5E8M7; D3YZ29; D3YVP6; D3YX76; Q9D5J8; P15626; E9QAC8; Q6PJ91; P19639; O35660; D3YVP9; D3YVP5; Q80W21 Glutathione transferase OS=Mus musculus OX=10090 GN=Gstm6 PE=1 SV=1; Glutathione S-transferase Mu 7 (Fragment) OS=Mus musculus OX=10090 GN=Gstm7 PE=1 SV=1; Glutathione S-transferase Mu 7 OS=Mus musculus OX=10090 GN=Gstm7 PE=1 SV=2; Glutathione S-transferase OS=Mus musculus OX=10090 GN=Gstm2 PE=1 SV=1; Glutathione transferase OS=Mus musculus OX=10090 GN=Gstm6 PE=2 SV=1; Glutathione S-transferase Mu 2 OS=Mus musculus OX=10090 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Mu 7 (Fragment) OS=Mus musculus OX=10090 GN=Gstm7 PE=1 SV=1; Glutathione transferase OS=Mus musculus OX=10090 GN=Gstm7 PE=2 SV=1; Glutathione S-transferase Mu 3 OS=Mus musculus OX=10090 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 6 OS=Mus musculus OX=10090 GN=Gstm6 PE=1 SV=4; Glutathione S-transferase (Fragment) OS=Mus musculus OX=10090 GN=Gstm6 PE=1 SV=1; Glutathione transferase OS=Mus musculus OX=10090 GN=Gstm7 PE=1 SV=1; Glutathione S-transferase Mu 7 OS=Mus musculus OX=10090 GN=Gstm7 PE=1 SV=1 0 2 2 0.7804 0 1 1 1 801.87311 1602.73894 1602.73795 0.62 0.00049 0/0 0 0 1435217 HCD 30 MS2 0 58.6 110 36.4788 8322 8322 8320 QEplus033719.raw F4 60.1 49.3 62.2 48 58.8 73.3 41 3.87 1 FALSE 1.14E-05 1.56E-08 1.581 -250 25738 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAPTPQPSR [K].qAPTPQPSR.[R] N-Term(TMT6plex) 3 H3BLG8 Protein CUSTOS (Fragment) OS=Mus musculus OX=10090 GN=2210016L21Rik PE=1 SV=1 H3BLG8; Q3UY34; A0A0R4J099 Protein CUSTOS (Fragment) OS=Mus musculus OX=10090 GN=2210016L21Rik PE=1 SV=1; Protein CUSTOS OS=Mus musculus OX=10090 GN=Custos PE=2 SV=1; Protein CUSTOS OS=Mus musculus OX=10090 GN=2210016L21Rik PE=1 SV=1 0 2 2 0.3833 0 1 1 1 605.84064 1210.674 1210.67415 -0.13 -0.00008 0/0 0 0 2239898.75 HCD 30 MS2 16.27261 133.4 110 36.4836 8324 8324 8320 QEplus033719.raw F4 140.9 104 146.2 105 149.5 155 305 2.27 1 FALSE 0.002056 0.03668 0.187 -250 25761 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQGGDGYYGR [K].sQGGDGYYGR.[E] N-Term(TMT6plex) 10 P70335; P70336 Rho-associated protein kinase 1 OS=Mus musculus OX=10090 GN=Rock1 PE=1 SV=1;Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1 Q3UMT5; A0A3Q4EGR2; P70335-2; P70335; P70336; A0A1Y7VMN0; P70336-2; F8VPK5; Q3TR46; A0A3Q4L2X0 Rho-associated protein kinase 2 (Fragment) OS=Mus musculus OX=10090 GN=Rock2 PE=2 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Rock1 PE=1 SV=1; Isoform 2 of Rho-associated protein kinase 1 OS=Mus musculus OX=10090 GN=Rock1; Rho-associated protein kinase 1 OS=Mus musculus OX=10090 GN=Rock1 PE=1 SV=1; Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1; Rho-associated protein kinase 2 (Fragment) OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1; Isoform 2 of Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2; Rho-associated protein kinase OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rock2 PE=2 SV=1; Rho-associated protein kinase 1 (Fragment) OS=Mus musculus OX=10090 GN=Rock1 PE=1 SV=1 0 2 2 0.7262 0 1 1 1 644.80951 1288.61174 1288.61194 -0.16 -0.0001 0/0 0 0 3390251.75 HCD 30 MS2 29.5413 211.6 110 36.4909 8327 8327 8320 QEplus033719.raw F4 183 179.3 430.2 138.1 201.2 137.9 46 3.25 2 FALSE 1.14E-05 3.08E-07 1.334 -250 25773 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVEDCEHR [K].mVEDcEHR.[L] N-Term(TMT6plex); C5(Carbamidomethyl) 2 F8WHM5 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 F8WHM5; Q61543 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 0 2 2 0.7228 0 1 1 1 652.79858 1304.58989 1304.59247 -1.98 -0.00129 0/0 0 0 2120344.5 HCD 30 MS2 0 126 110 36.4959 8329 8329 8320 QEplus033719.raw F4 125.7 107.3 130.9 100.4 147.7 144.1 24 2.85 1 FALSE 1.14E-05 0.0009195 0.67 -250 25788 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEEEQQTGGQQK [R].gEEEQQTGGQQk.[Q] N-Term(TMT6plex); K12(TMT6plex) 1 Q91WM2 Haloacid dehalogenase-like hydrolase domain-containing 5 OS=Mus musculus OX=10090 GN=Hdhd5 PE=1 SV=1 Q91WM2 Haloacid dehalogenase-like hydrolase domain-containing 5 OS=Mus musculus OX=10090 GN=Hdhd5 PE=1 SV=1 0 3 3 0.7251 0 1 1 1 592.9765 1776.91495 1776.91283 1.2 0.00071 0/0 0 0 1278938.25 HCD 30 MS2 0 110 110 36.5082 8333 8333 8331 QEplus033719.raw F4 105.3 84.8 94.9 110.1 119.2 145.5 252 3.42 1 FALSE 1.14E-05 2.86E-06 1.151 -250 25794 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAGEALR [R].qAGEALR.[Q] N-Term(TMT6plex) 1 Q9D7E4 UPF0449 protein C19orf25 homolog OS=Mus musculus OX=10090 PE=1 SV=1 Q9D7E4 UPF0449 protein C19orf25 homolog OS=Mus musculus OX=10090 PE=1 SV=1 0 2 2 0.0503 0 1 1 1 487.28455 973.56182 973.56281 -1.02 -0.0005 0/0 0 0 4888161.5 HCD 30 MS2 57.13374 515.5 110 36.5107 8334 8334 8331 QEplus033719.raw F4 625.2 361.3 526.1 415.9 596.5 567.9 169 1.59 1 FALSE 0.002071 0.03838 0.18 -250 25803 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDAGYSEPR [K].nDAGYSEPR.[E] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.6952 0 1 1 1 619.3056 1237.60393 1237.60105 2.33 0.00144 0/0 0 0 8273264 HCD 30 MS2 0 380.7 110 36.5132 8335 8335 8331 QEplus033719.raw F4 433.3 163.6 323.7 598.6 199.4 565.5 100 3.15 2 FALSE 0.0005556 0.008491 0.43 -250 25813 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESRYEEEEEQSR [R].eSRYEEEEEQSR.[S] N-Term(TMT6plex) 2 G3X956 FACT complex subunit OS=Mus musculus OX=10090 GN=Supt16 PE=1 SV=1 G3X956; Q920B9 FACT complex subunit OS=Mus musculus OX=10090 GN=Supt16 PE=1 SV=1; FACT complex subunit SPT16 OS=Mus musculus OX=10090 GN=Supt16h PE=1 SV=2 1 3 3 0.6458 0 1 1 1 600.61328 1799.82529 1799.82452 0.43 0.00026 0/0 0 0 7906396.5 HCD 30 MS2 0 155.1 110 36.5157 8336 8336 8331 QEplus033719.raw F4 168.2 170.8 172 103 177.9 138.6 56 4.63 1 FALSE 1.14E-05 3.09E-09 1.714 -250 25828 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFTDEESR [K].rFTDEESR.[V] N-Term(TMT6plex) 11 Q8K019 Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=2 Q8K019; A0A087WRN1; F8WI22; Q3TRC6; Q8K019-3; Q8K019-2; A0A087WQA0; Q3UR37; Q3UDL9; Q05C67; Q3TSZ0 Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=2; Bcl-2-associated transcription factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1; Isoform 3 of Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1; Isoform 2 of Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1; Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1; Bclaf1 protein (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1 1 2 2 0.3496 0 1 1 1 634.82672 1268.64617 1268.64324 2.3 0.00146 0/0 0 0 5022057.5 HCD 30 MS2 46.42254 200.7 110 36.5232 8339 8339 8331 QEplus033719.raw F4 110.1 84.5 101.7 75.5 134.2 698.4 163 2.66 1 FALSE 0.001142 0.0153 0.329 -250 25832 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDGHMVTAR [K].eDGHMVTAR.[Q] N-Term(TMT6plex) 2 Q922Q1 Mitochondrial amidoxime reducing component 2 OS=Mus musculus OX=10090 GN=Mtarc2 PE=1 SV=1 E0CZH6; Q922Q1 Mitochondrial amidoxime reducing component 2 (Fragment) OS=Mus musculus OX=10090 GN=Mtarc2 PE=1 SV=1; Mitochondrial amidoxime reducing component 2 OS=Mus musculus OX=10090 GN=Mtarc2 PE=1 SV=1 0 2 2 0.6069 0 1 1 1 622.81616 1244.62505 1244.62549 -0.35 -0.00022 0/0 0 0 4097825 HCD 30 MS2 0 171.2 110 36.5257 8340 8340 8331 QEplus033719.raw F4 174.7 132.7 175.2 184.1 158.5 201.8 120 2.9 1 FALSE 1.14E-05 3.23E-06 1.141 -250 25837 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TISESTSR [K].tISESTSR.[R] N-Term(TMT6plex) 3 E9Q784 Zinc finger CCCH domain-containing protein 13 OS=Mus musculus OX=10090 GN=Zc3h13 PE=1 SV=1 Q9CXN5; E9Q784; A0A2I3BPQ5 C3H1-type domain-containing protein OS=Mus musculus OX=10090 GN=Zc3h13 PE=2 SV=1; Zinc finger CCCH domain-containing protein 13 OS=Mus musculus OX=10090 GN=Zc3h13 PE=1 SV=1; Zinc finger CCCH domain-containing protein 13 OS=Mus musculus OX=10090 GN=Zc3h13 PE=1 SV=1 0 2 2 0.4425 0 1 1 1 555.30457 1109.60185 1109.59998 1.69 0.00094 0/0 0 0 3849728.75 HCD 30 MS2 61.21674 282 110 36.5282 8341 8341 8331 QEplus033719.raw F4 312.2 230.6 301.1 220.6 344.9 282.3 154 1.74 1 FALSE 0.0006035 0.008905 0.423 -250 25844 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGDQVR [K].vGDQVR.[L] N-Term(TMT6plex) 6 Q6XMP4 Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1 Q6XMP4; Q8R346; Q8BGQ7; Q6PDM7; Q3TZ32; Q3UD67 "Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=2; Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1" 0 2 2 0.2127 0 1 1 1 451.76703 902.52678 902.5257 1.2 0.00054 0/0 0 0 116090824 HCD 30 MS2 5.907745 551 13.445 36.5355 8343 8343 8342 QEplus033719.raw F4 668.7 413.3 555 471.5 728 469.3 171 2.21 1 FALSE 0.004038 0.07475 0.075 -250 25877 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEVPGR [R].eEVPGR.[SR] N-Term(TMT6plex) 10 P62814 "V-type proton ATPase subunit B, brain isoform OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=1 SV=1" Q8BP86; Q8BP86-2; Q8BP86-3; P62814; Q05D51; F7D5X7; A0A1S6GWG6; Q91YH6; Q99KA3; A2AIV6 "snRNA-activating protein complex subunit 4 OS=Mus musculus OX=10090 GN=Snapc4 PE=1 SV=2; Isoform 2 of snRNA-activating protein complex subunit 4 OS=Mus musculus OX=10090 GN=Snapc4; Isoform 3 of snRNA-activating protein complex subunit 4 OS=Mus musculus OX=10090 GN=Snapc4; V-type proton ATPase subunit B, brain isoform OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=1 SV=1; Snapc4 protein (Fragment) OS=Mus musculus OX=10090 GN=Snapc4 PE=2 SV=1; snRNA-activating protein complex subunit 4 (Fragment) OS=Mus musculus OX=10090 GN=Snapc4 PE=1 SV=1; Vacuolar proton pump subunit B OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=2 SV=1; V-type proton ATPase subunit B, kidney isoform OS=Mus musculus OX=10090 GN=Atp6v1b1 PE=1 SV=1; Vacuolar proton pump subunit B (Fragment) OS=Mus musculus OX=10090 GN=Atp6v1b1 PE=2 SV=1; snRNA-activating protein complex subunit 4 OS=Mus musculus OX=10090 GN=Snapc4 PE=1 SV=1" 0 2 2 0.0884 0 1 1 1 458.25952 915.51177 915.50971 2.24 0.00103 0/0 0 0 16288893 HCD 30 MS2 55.48783 610 69.181 36.5471 8348 8348 8342 QEplus033719.raw F4 683 445.1 636.4 568.4 698.6 628.4 85 2.15 1 FALSE 0.002064 0.03789 0.182 -250 25882 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECCVTAGGR [R].eccVTAGGR.[D] N-Term(TMT6plex); C2(Carbamidomethyl); C3(Carbamidomethyl) 1 Q91WM3 U3 small nucleolar RNA-interacting protein 2 OS=Mus musculus OX=10090 GN=Rrp9 PE=1 SV=1 Q91WM3 U3 small nucleolar RNA-interacting protein 2 OS=Mus musculus OX=10090 GN=Rrp9 PE=1 SV=1 0 2 2 0.6625 0 1 1 1 619.7923 1238.57732 1238.58191 -3.71 -0.00229 0/0 0 0 13116733 HCD 30 MS2 30.97327 626.1 110 36.5496 8349 8349 8342 QEplus033719.raw F4 678.5 334.1 589.7 871.6 410.8 871.7 51 2.4 1 FALSE 1.14E-05 4.29E-05 0.927 -250 25909 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IENHEGVR [K].iENHEGVR.[R] N-Term(TMT6plex) 2 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm 0 3 3 0.5442 0 1 1 1 394.88602 1182.6435 1182.64285 0.55 0.00022 0/0 0 0 50930536 HCD 30 MS2 15.51969 311.3 23.912 36.5692 8356 8356 8353 QEplus033719.raw F4 346.7 270.6 309.8 280.8 379.9 280.3 228 3.51 2 FALSE 1.14E-05 0.0003561 0.751 -250 25916 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SACGVCPGR [K].sAcGVcPGR.[L] N-Term(TMT6plex); C3(Carbamidomethyl); C6(Carbamidomethyl) 3 Q9D1R9 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=2 A0A0G2JGY8; Q9D1R9; A0A0G2JEY6 60S ribosomal protein L34 (Fragment) OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=4; 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=2; 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=1 0 2 2 0.5533 0 1 1 1 596.79382 1192.58037 1192.57643 3.31 0.00197 0/0 0 0 9064272 HCD 30 MS2 43.03136 664.9 110 36.5717 8357 8357 8353 QEplus033719.raw F4 653.8 591.8 740.8 543.9 715.6 743.6 75 2.44 1 FALSE 1.14E-05 0.0006375 0.701 -250 25920 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GKNEEMQR [R].gkNEEMQR.[S] N-Term(TMT6plex); K2(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 2 2 0.6667 0 1 1 1 725.3988 1449.79033 1449.78842 1.32 0.00096 0/0 0 0 3582583.25 HCD 30 MS2 0 153.9 110 36.5742 8358 8358 8353 QEplus033719.raw F4 291.3 22.3 98.8 332.5 18 160.3 429 2.67 1 FALSE 1.14E-05 0.0005143 0.72 -250 25926 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDGDHDCADGSDEK [K].cDGDHDcADGSDEk.[D] N-Term(TMT6plex); C1(Carbamidomethyl); C7(Carbamidomethyl); K14(TMT6plex) 2 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 A0A0R4J0I9; Q91ZX7 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 0 3 3 0.9412 0 1 1 1 680.2879 2038.84916 2038.84825 0.44 0.0003 0/0 0 0 1556297 HCD 30 MS2 0 102.1 110 36.5767 8359 8359 8353 QEplus033719.raw F4 98.2 96.3 111.6 86.4 124 96.2 6 4.42 1 FALSE 1.14E-05 5.72E-11 2.043 -250 25928 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IENHEGVR [K].iENHEGVR.[R] N-Term(TMT6plex) 2 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm 0 2 2 0.5231 0 1 1 1 591.82532 1182.64336 1182.64285 0.43 0.00025 0/0 0 0 7618870 HCD 30 MS2 10.62374 530.8 110 36.5792 8360 8360 8353 QEplus033719.raw F4 602.6 436.4 501.7 501.3 659.2 483.7 237 2.81 2 FALSE 1.14E-05 0.0001952 0.801 -250 25934 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQGGAGEGLSR [K].dQGGAGEGLSR.[N] N-Term(TMT6plex) 9 G3UZE9 Microtubule-associated protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Map2 PE=1 SV=1 G3UZE9; B2KGT5; A0A668KLC6; Q80ZL4; P20357; Q80X35; E9Q8Y2; Q3URJ7; Q3TLQ0 Microtubule-associated protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Map2 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map2 PE=2 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map2 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map2 PE=1 SV=1; Microtubule-associated protein 2 OS=Mus musculus OX=10090 GN=Map2 PE=1 SV=2; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map2 PE=1 SV=1; Microtubule-associated protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Map2 PE=1 SV=8; MAP2_projctn domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Map2 PE=2 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map2 PE=1 SV=1 0 2 2 0.7243 0 1 1 1 638.32935 1275.65141 1275.64906 1.85 0.00118 0/0 0 0 5841702.5 HCD 30 MS2 0 225.6 110 36.5818 8361 8361 8353 QEplus033719.raw F4 234.2 179.1 238.1 191.8 263.4 247.1 152 3.41 1 FALSE 1.14E-05 3.16E-09 1.712 -250 25956 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HAVSEGTK [K].hAVSEGTk.[A] N-Term(TMT6plex); K8(TMT6plex) 17 Q64475; Q64525 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3;Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64475; Q8CGP2; Q64525; Q64524; Q8CGP1; P10854; A0JNS9; Q64478; P70696; Q9D2U9; Q8CGP2-2; Q8CBB6; Q6ZWY9; Q8CGP0; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 2-E OS=Mus musculus OX=10090 GN=H2bc21 PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Histone H2B type 3-A OS=Mus musculus OX=10090 GN=Hist3h2ba PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3; Histone H2B type 3-B OS=Mus musculus OX=10090 GN=H2bu1 PE=1 SV=3; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 0 3 3 0.1009 0 1 1 1 429.58743 1286.74775 1286.74687 0.68 0.00029 0/0 0 0 1204750.375 HCD 30 MS2 89.02698 392.5 110 36.5941 8365 8365 8364 QEplus033719.raw F4 567 267.2 423.4 333.3 327 437.4 422 2.18 2 FALSE 1.14E-05 0.0001669 0.814 -250 25971 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSSAGFDR [R].gSSAGFDR.[H] N-Term(TMT6plex) 2 Q9QUM9 Proteasome subunit alpha type-6 OS=Mus musculus OX=10090 GN=Psma6 PE=1 SV=1 Q9QUM9; E0CYT2 Proteasome subunit alpha type-6 OS=Mus musculus OX=10090 GN=Psma6 PE=1 SV=1; Proteasome subunit alpha type-6 OS=Mus musculus OX=10090 GN=Psma6 PE=1 SV=1 0 2 2 0.4329 0 1 1 1 513.26526 1025.52324 1025.52134 1.85 0.00095 0/0 0 0 98649648 HCD 30 MS2 10.78829 583.6 13.084 36.5988 8367 8367 8364 QEplus033719.raw F4 583.8 496.1 613.8 506.1 687.9 614 88 2.31 1 FALSE 3.35E-05 0.001253 0.642 -250 25978 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVEDCEHR [K].mVEDcEHR.[L] N-Term(TMT6plex); C5(Carbamidomethyl) 2 F8WHM5 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 F8WHM5; Q61543 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 0 3 3 0.7837 0 1 1 1 435.5361 1304.59375 1304.59247 0.98 0.00043 0/0 0 0 55921616 HCD 30 MS2 18.26246 265.9 28.806 36.6011 8368 8368 8364 QEplus033719.raw F4 263.9 229.3 285.1 192.4 335.3 289.5 22 4.53 1 FALSE 1.14E-05 1.67E-05 1.005 -250 26004 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLCGCR [R].tLcGcR.[V] N-Term(TMT6plex); C3(Carbamidomethyl); C5(Carbamidomethyl) 3 P84104 Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3 PE=1 SV=1 P84104-2; P84104; Q9D6W4 Isoform Short of Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3; Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3 PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf3 PE=2 SV=1 0 2 2 0.3853 0 1 1 1 498.25217 995.49706 995.49639 0.67 0.00033 0/0 0 0 10109510 HCD 30 MS2 23.37357 872.3 110 36.6104 8372 8372 8364 QEplus033719.raw F4 965.5 801.1 920.8 657.9 1128 760.7 69 2.31 1 FALSE 0.003142 0.06122 0.111 -250 26014 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VPCGQNTR [R].vPcGQNTR.[F] N-Term(TMT6plex); C3(Carbamidomethyl) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.5258 0 1 1 1 580.80591 1160.60454 1160.60436 0.16 0.00009 0/0 0 0 9854047 HCD 30 MS2 27.81247 496 110 36.6129 8373 8373 8364 QEplus033719.raw F4 606.5 195.6 379.9 884 271.7 638.6 196 2.13 2 FALSE 0.001142 0.01521 0.33 -250 26034 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELGHNQAASASAQR [R].eLGHNQAASASAQR.[E] N-Term(TMT6plex) 1 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 0 3 3 0.7237 0 1 1 1 556.9588 1668.86185 1668.86151 0.2 0.00011 0/0 0 0 13823793 HCD 30 MS2 2.976603 178.1 110 36.6252 8377 8377 8375 QEplus033719.raw F4 178.9 174.1 199.6 144.5 246 125.6 231 5.14 1 FALSE 1.14E-05 8.32E-11 2.012 -250 26041 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GKNEEMQR [R].gkNEEMQR.[S] N-Term(TMT6plex); K2(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 3 3 0.5 0 1 1 1 483.93454 1449.78907 1449.78842 0.45 0.00022 0/0 0 0 150614624 HCD 30 MS2 12.26377 883.5 12.912 36.6274 8378 8378 8375 QEplus033719.raw F4 1711.3 114.9 588.7 1909.1 80.7 896 428 2.44 1 FALSE 0.001833 0.03128 0.21 -250 26048 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMQEEVAR [R].rMQEEVAR.[R] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.5711 0 1 1 1 416.56274 1247.67368 1247.67277 0.73 0.0003 0/0 0 0 102765584 HCD 30 MS2 17.03007 233.6 12.252 36.6297 8379 8379 8375 QEplus033719.raw F4 261.3 194.2 242.2 208.5 263 232.6 274 4.29 2 FALSE 1.14E-05 2.90E-05 0.959 -250 26061 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMQEEVAR [R].rMQEEVAR.[R] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.6115 0 1 1 1 624.34045 1247.67363 1247.67277 0.69 0.00043 0/0 0 0 16539306 HCD 30 MS2 2.269184 201.4 110 36.6344 8381 8381 8375 QEplus033719.raw F4 204.6 175.9 220.4 176.2 211.5 219.9 274 2.96 2 FALSE 4.43E-05 0.001687 0.615 -250 26070 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRPVVAAQAR [K].sRPVVAAQAR.[G] N-Term(TMT6plex) 2 E9PU96 Nucleolar pre-ribosomal-associated protein 1 OS=Mus musculus OX=10090 GN=Urb1 PE=1 SV=1 E9PU96; Q571H0 Nucleolar pre-ribosomal-associated protein 1 OS=Mus musculus OX=10090 GN=Urb1 PE=1 SV=1; Nucleolar pre-ribosomal-associated protein 1 OS=Mus musculus OX=10090 GN=Urb1 PE=1 SV=2 0 3 3 0.5433 0 1 1 1 428.59839 1283.78061 1283.77453 4.74 0.00203 0/0 0 0 5450026.5 HCD 30 MS2 42.65667 356.6 110 36.6394 8383 8383 8375 QEplus033719.raw F4 405 290.5 383 308 341.7 411.4 249 4.16 1 FALSE 1.14E-05 8.51E-06 1.061 -250 26076 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELSQDSTGR [K].eLSQDSTGR.[V] N-Term(TMT6plex) 2 P97355 Spermine synthase OS=Mus musculus OX=10090 GN=Sms PE=1 SV=1 P97355; E9PZ58 Spermine synthase OS=Mus musculus OX=10090 GN=Sms PE=1 SV=1; Spermine synthase OS=Mus musculus OX=10090 GN=Sms PE=1 SV=1 0 2 2 0.5714 0 1 1 1 611.31732 1221.62737 1221.62726 0.09 0.00005 0/0 0 0 3650748 HCD 30 MS2 13.175 214.2 110 36.6419 8384 8384 8375 QEplus033719.raw F4 232.7 165.2 209.1 231.6 230.3 216.3 188 2.8 1 FALSE 1.14E-05 1.10E-06 1.23 -250 26087 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVSSSSYR [R].sVSSSSYR.[R] N-Term(TMT6plex) 9 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; Q3TWV0; A2AKJ2; Q3U6S1; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.6861 0 1 1 1 551.29132 1101.57536 1101.57377 1.45 0.0008 0/0 0 0 274898272 HCD 30 MS2 2.868026 532.8 6.145 36.6518 8387 8387 8386 QEplus033719.raw F4 553.7 586.4 565 391 701.6 399.2 130 2.74 2 FALSE 4.43E-05 0.001692 0.614 -250 26101 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCAQALR [K].gcAQALR.[G] N-Term(TMT6plex); C2(Carbamidomethyl) 5 Q3TF14 Adenosylhomocysteinase OS=Mus musculus OX=10090 GN=Ahcy PE=1 SV=1 Q3U4D1; Q8BPI7; Q3U5U5; Q3TF14; Q5M9P0 Adenosylhomocysteinase OS=Mus musculus OX=10090 PE=2 SV=1; Adenosylhomocysteinase (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Adenosylhomocysteinase OS=Mus musculus OX=10090 PE=2 SV=1; Adenosylhomocysteinase OS=Mus musculus OX=10090 GN=Ahcy PE=1 SV=1; Adenosylhomocysteinase OS=Mus musculus OX=10090 GN=Ahcy PE=2 SV=1 0 2 2 0.287 0 1 1 1 502.78006 1004.55284 1004.55087 1.97 0.00099 0/0 0 0 19607764 HCD 30 MS2 17.44117 681.6 62.002 36.6565 8389 8389 8386 QEplus033719.raw F4 693.3 596.5 699.9 596.5 841.2 662.4 262 2.23 1 FALSE 0.0002814 0.005688 0.485 -250 26113 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPAGQQDEDTDK [R].rPAGQQDEDTDk.[L] N-Term(TMT6plex); K12(TMT6plex) 4 Q91W06 V-type proton ATPase subunit a OS=Mus musculus OX=10090 GN=Tcirg1 PE=2 SV=1 Q91W06; Q9JL12; Q9JHF5; Q9CTA9 V-type proton ATPase subunit a OS=Mus musculus OX=10090 GN=Tcirg1 PE=2 SV=1; V-type proton ATPase subunit a OS=Mus musculus OX=10090 GN=Tcirg1 PE=2 SV=1; V-type proton ATPase subunit a OS=Mus musculus OX=10090 GN=Tcirg1 PE=1 SV=1; V-type proton ATPase subunit a (Fragment) OS=Mus musculus OX=10090 GN=Tcirg1 PE=2 SV=1 0 3 3 0.6134 0 1 1 1 606.65179 1817.94083 1817.93938 0.8 0.00048 0/0 0 0 3721055 HCD 30 MS2 7.885499 209.1 110 36.6616 8391 8391 8386 QEplus033719.raw F4 225.4 146.6 253.9 217.1 200.5 211 274 4.32 1 FALSE 1.14E-05 3.23E-09 1.71 -250 26122 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSPTNLANR [K].rSPTNLANR.[Q] N-Term(TMT6plex) 5 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; E9PZ16; Q52KG8; Q5RKM8; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Hspg2 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Hspg2 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 1 2 2 0.4233 0 1 1 1 629.36597 1257.72466 1257.7225 1.72 0.00108 0/0 0 0 8290683.5 HCD 30 MS2 0 142.3 110 36.6641 8392 8392 8386 QEplus033719.raw F4 145.5 130 169 125.7 126.1 157.3 391 2.15 2 FALSE 0.00293 0.05733 0.121 -250 26128 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEEEAAR [R-].mEEEAAR.[L] N-Term(TMT6plex) 6 G3UWR2 GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1 G3UYR9; G3UZX7; G3UWR2; Q6Y7W8-2; G3UYG6; Q6Y7W8 GRB10-interacting GYF protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; GRB10-interacting GYF protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; Isoform 2 of GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2; GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=2 0 2 2 0.4797 0 1 1 1 532.76617 1064.52507 1064.52438 0.65 0.00035 0/0 0 0 4860705.5 HCD 30 MS2 46.14449 523.2 110 36.6666 8393 8393 8386 QEplus033719.raw F4 658.3 348.1 542.5 387.3 560.7 642.4 120 2.71 1 FALSE 5.44E-05 0.00263 0.572 -250 26147 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHEATLEAR [K].aHEATLEAR.[A] N-Term(TMT6plex) 8 F8VPM7 ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1 F8VPM7; V9GWT6; Q99MI1-2; V9GXP8; V9GXF0; V9GXH3; V9GX53; Q99MI1 ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; Isoform 2 of ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1; ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1 0 2 2 0.6498 0 1 1 1 613.83997 1226.67266 1226.66907 2.93 0.00179 0/0 0 0 1972293.875 HCD 30 MS2 0 92.8 110 36.6742 8396 8396 8386 QEplus033719.raw F4 103.5 71.2 89.4 79 113.5 100.2 248 2.77 1 FALSE 1.14E-05 5.59E-05 0.905 -250 26153 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGGQTESNEEGK [K].dGGQTESNEEGk.[E] N-Term(TMT6plex); K12(TMT6plex) 10 Q80X50 Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1 A0A0G2JDV6; Q80X50-4; Q80X50-3; Q80X50-5; A0A0H2UH17; Q8BJ53; Q80X50-2; Q80X50; Q812D5; Q812D4 Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Isoform 4 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Isoform 3 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Isoform 5 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; UBA domain-containing protein OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1; Isoform 2 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Lingerer protein-2a OS=Mus musculus OX=10090 GN=lig-2a PE=2 SV=1; Lingerer protein-2b OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1 0 2 2 0.8044 0 1 1 1 854.92719 1708.84709 1708.83899 4.74 0.00405 0/0 0 0 2054148.625 HCD 30 MS2 0 98.3 110 36.6815 8398 8398 8397 QEplus033719.raw F4 125.2 84.5 118.6 63.9 105.1 92.3 156 4.09 1 FALSE 1.14E-05 6.76E-13 2.409 -250 26159 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AADVHEVR [K].aADVHEVR.[K] N-Term(TMT6plex) 2 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm 0 3 3 0.3848 0 1 1 1 375.87903 1125.62253 1125.62139 1.02 0.00038 0/0 0 0 53372892 HCD 30 MS2 4.186082 302.6 21.374 36.6886 8401 8401 8397 QEplus033719.raw F4 364.8 251.5 259.2 300.2 332 308.1 155 3.3 2 FALSE 1.14E-05 1.77E-05 1 -250 26165 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQQMVMR [K].eQQmVMR.[G] N-Term(TMT6plex); M4(Oxidation) 5 P61620 Protein transport protein Sec61 subunit alpha isoform 1 OS=Mus musculus OX=10090 GN=Sec61a1 PE=1 SV=2 A0A0A6YVQ7; P61620; Q9CYJ6; Q9JLR1; Q3TJD0 Protein transport protein Sec61 subunit alpha isoform 2 (Fragment) OS=Mus musculus OX=10090 GN=Sec61a2 PE=1 SV=1; Protein transport protein Sec61 subunit alpha isoform 1 OS=Mus musculus OX=10090 GN=Sec61a1 PE=1 SV=2; Protein transport protein Sec61 subunit alpha isoform 2 OS=Mus musculus OX=10090 GN=Sec61a2 PE=1 SV=1; Protein transport protein Sec61 subunit alpha isoform 2 OS=Mus musculus OX=10090 GN=Sec61a2 PE=2 SV=3; Plug_translocon domain-containing protein OS=Mus musculus OX=10090 GN=Sec61a1 PE=2 SV=1 0 2 2 0.3077 0 1 1 1 583.79913 1166.59099 1166.58593 4.34 0.00253 0/0 0 0 2189748.5 HCD 30 MS2 20.71329 207 110 36.6981 8405 8405 8397 QEplus033719.raw F4 226.3 165.6 209.9 200.5 215.7 224.2 141 1.82 1 FALSE 0.004228 0.07776 0.067 -250 26187 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLQTSQDAR [K].gLQTSQDAR.[F] N-Term(TMT6plex) 2 B2MWM9 Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 Q3UWP8; B2MWM9 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Calr PE=2 SV=1; Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 0 2 2 0.5213 0 1 1 1 602.82813 1204.64897 1204.64833 0.53 0.00032 0/0 0 0 78752224 HCD 30 MS2 4.567351 267.1 21.056 36.7104 8409 8409 8408 QEplus033719.raw F4 252.4 222 274.4 215.2 345.8 292.8 306 3.05 1 FALSE 1.14E-05 2.41E-06 1.165 -250 26216 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AADVHEVR [K].aADVHEVR.[K] N-Term(TMT6plex) 2 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm 0 2 2 0.4896 0 1 1 1 563.31458 1125.62187 1125.62139 0.43 0.00024 0/0 0 0 17585378 HCD 30 MS2 5.395611 679.6 105.276 36.722 8414 8414 8408 QEplus033719.raw F4 775.7 552.2 655.1 663.2 718.9 712.7 156 2.88 2 FALSE 1.14E-05 0.0001767 0.81 -250 26222 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RASDNLVR [K].rASDNLVR.[A] N-Term(TMT6plex) 10 A0A1L1SQ51 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1 Q68FD6; A0A1L1SRI1; A0A1L1SQ51; B2RY15; Q9CS79; Q6PB69; Q8CHG4; Q8CDM9; A0A1L1SQP9; E9PUM4 Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Tln2 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; MKIAA0320 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1 1 3 3 0.4613 0 1 1 1 387.23032 1159.6764 1159.67449 1.65 0.00064 0/0 0 0 15812630 HCD 30 MS2 20.90462 331 110 36.7245 8415 8415 8408 QEplus033719.raw F4 351.8 233.6 369.1 266.1 432.9 332.3 286 4.01 1 FALSE 1.14E-05 4.97E-06 1.105 -250 26229 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGEEQQR [K].lGEEQQR.[Q] N-Term(TMT6plex) 1 Q8K3X4 Probable E3 ubiquitin-protein ligase IRF2BPL OS=Mus musculus OX=10090 GN=Irf2bpl PE=1 SV=1 Q8K3X4 Probable E3 ubiquitin-protein ligase IRF2BPL OS=Mus musculus OX=10090 GN=Irf2bpl PE=1 SV=1 0 2 2 0.1516 0 1 1 1 544.79913 1088.59099 1088.58975 1.14 0.00062 0/0 0 0 13488341 HCD 30 MS2 15.24973 638.3 110 36.727 8416 8416 8408 QEplus033719.raw F4 639 584.3 658.6 512.5 802.9 632.6 255 2.44 1 FALSE 0.0002719 0.005486 0.49 -250 26238 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALQQCSQAR [K].aLQQcSQAR.[E] N-Term(TMT6plex); C5(Carbamidomethyl) 2 A2AST1 Coiled-coil domain-containing 141 OS=Mus musculus OX=10090 GN=Ccdc141 PE=1 SV=1 A2AST1; E9Q8Q6 Coiled-coil domain-containing 141 OS=Mus musculus OX=10090 GN=Ccdc141 PE=1 SV=1; Coiled-coil domain-containing 141 OS=Mus musculus OX=10090 GN=Ccdc141 PE=1 SV=2 0 2 2 0.5159 0 1 1 1 645.8432 1290.67912 1290.67858 0.42 0.00027 0/0 0 0 6362292.5 HCD 30 MS2 15.14736 242.6 110 36.7295 8417 8417 8408 QEplus033719.raw F4 273.8 119.7 269.1 313.2 138.8 340.7 245 3.45 1 FALSE 1.14E-05 6.00E-07 1.28 -250 26245 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EADPEVR [R].eADPEVR.[S] N-Term(TMT6plex) 1 Q8VI75 Importin-4 OS=Mus musculus OX=10090 GN=Ipo4 PE=1 SV=1 Q8VI75 Importin-4 OS=Mus musculus OX=10090 GN=Ipo4 PE=1 SV=1 0 2 2 0.5621 0 1 1 1 522.78192 1044.55657 1044.5523 4.08 0.00213 0/0 0 0 5881739.5 HCD 30 MS2 42.95806 482.9 110 36.732 8418 8418 8408 QEplus033719.raw F4 558.6 342.6 452.1 477.6 545.9 520.7 143 2.9 1 FALSE 0.0008183 0.01134 0.383 -250 26249 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIDGEEQR [K].aIDGEEQR.[A] N-Term(TMT6plex) 4 Q61687 Transcriptional regulator ATRX OS=Mus musculus OX=10090 GN=Atrx PE=1 SV=3 Q8BSH0; Q61687; F6RDB7; A0A0G2JFA5 DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Atrx PE=2 SV=1; Transcriptional regulator ATRX OS=Mus musculus OX=10090 GN=Atrx PE=1 SV=3; DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Atrx PE=1 SV=2; DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Atrx PE=1 SV=1 0 2 2 0.3468 0 1 1 1 573.80121 1146.59514 1146.59523 -0.08 -0.00005 0/0 0 0 2784343.75 HCD 30 MS2 26.46197 284.3 110 36.7393 8420 8420 8419 QEplus033719.raw F4 276.7 282 269.5 218.9 366.3 292.3 183 2.48 1 FALSE 1.14E-05 0.0008382 0.678 -250 26255 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AFNSNNEQR [K].aFNSNNEQR.[T] N-Term(TMT6plex) 2 G3X9K3 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Mus musculus OX=10090 GN=Arfgef1 PE=1 SV=1 G3X9K3; Q8R3I7 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Mus musculus OX=10090 GN=Arfgef1 PE=1 SV=1; Arfgef1 protein (Fragment) OS=Mus musculus OX=10090 GN=Arfgef1 PE=2 SV=1 0 2 2 0.6866 0 1 1 1 654.82837 1308.64946 1308.64939 0.05 0.00003 0/0 0 0 3604492.25 HCD 30 MS2 0 168 110 36.7418 8421 8421 8419 QEplus033719.raw F4 177.9 133.1 175.4 141 197.1 183.3 118 3.51 1 FALSE 1.14E-05 1.38E-06 1.211 -250 26281 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTNEDSQNR [K].lTNEDSQNR.[Q] N-Term(TMT6plex) 4 E0CYH7 Filamin A-interacting protein 1-like OS=Mus musculus OX=10090 GN=Filip1l PE=1 SV=1 E0CYH7; Q6P6L0; E0CYM1; Q6P6L0-3 Filamin A-interacting protein 1-like OS=Mus musculus OX=10090 GN=Filip1l PE=1 SV=1; Filamin A-interacting protein 1-like OS=Mus musculus OX=10090 GN=Filip1l PE=1 SV=2; Filamin A-interacting protein 1-like OS=Mus musculus OX=10090 GN=Filip1l PE=1 SV=1; Isoform 3 of Filamin A-interacting protein 1-like OS=Mus musculus OX=10090 GN=Filip1l 0 2 2 0.6395 0 1 1 1 653.3327 1305.65813 1305.65962 -1.14 -0.00075 0/0 0 0 5295598 HCD 30 MS2 24.00683 214.8 110 36.7513 8425 8425 8419 QEplus033719.raw F4 250.6 180.8 185.3 147.5 343.1 181.4 141 2.94 1 FALSE 1.14E-05 2.51E-05 0.971 -250 26289 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEDTSAGTGDPPR [K].eEDTSAGTGDPPR.[K] N-Term(TMT6plex) 4 P56399 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 P56399; Q3U4W8; D3Z4K7; D3YYA5 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase 5 (Fragment) OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=8; Ubiquitin carboxyl-terminal hydrolase 5 (Fragment) OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 0 2 2 0.7784 0 1 1 1 780.8714 1560.73552 1560.73391 1.03 0.00081 0/0 0 0 5144022 HCD 30 MS2 11.52949 127 110 36.7539 8426 8426 8419 QEplus033719.raw F4 132.2 99.8 139.9 112.8 135.2 142 56 3.7 1 FALSE 1.14E-05 1.72E-09 1.762 -250 26294 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSNTLEQTAER [R].hSNTLEQTAER.[D] N-Term(TMT6plex) 3 E9Q7M2 "TSC22 domain family, member 2 OS=Mus musculus OX=10090 GN=Tsc22d2 PE=1 SV=1" Q3V1I7; E9Q7M2; A0A0G2JFZ4 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tsc22d2 PE=2 SV=1; TSC22 domain family, member 2 OS=Mus musculus OX=10090 GN=Tsc22d2 PE=1 SV=1; TSC22 domain family, member 2 OS=Mus musculus OX=10090 GN=Tsc22d2 PE=1 SV=1" 0 3 3 0.7629 0 1 1 1 505.59756 1514.77814 1514.77605 1.38 0.0007 0/0 0 0 4596617.5 HCD 30 MS2 14.87433 216.3 110 36.7564 8427 8427 8419 QEplus033719.raw F4 253.9 157.8 213.8 209.2 249.5 213.6 193 4.47 1 FALSE 1.14E-05 5.36E-08 1.479 -250 26301 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIQSNQPER [K].aIQSNQPER.[A] N-Term(TMT6plex) 3 D6RHR9 DnaJ homolog subfamily B member 12 OS=Mus musculus OX=10090 GN=Dnajb12 PE=1 SV=1 D6RHR9; Q9QYI4; Q8C4C9 DnaJ homolog subfamily B member 12 OS=Mus musculus OX=10090 GN=Dnajb12 PE=1 SV=1; DnaJ homolog subfamily B member 12 OS=Mus musculus OX=10090 GN=Dnajb12 PE=1 SV=2; DnaJ homolog subfamily B member 12 OS=Mus musculus OX=10090 GN=Dnajb12 PE=1 SV=1 0 2 2 0.6585 0 1 1 1 636.34906 1271.69084 1271.69053 0.25 0.00016 0/0 0 0 3604393.25 HCD 30 MS2 0 165.9 110 36.7589 8428 8428 8419 QEplus033719.raw F4 151.2 119.4 164.7 137.2 172.2 251 222 2.84 1 FALSE 1.14E-05 1.38E-06 1.211 -250 26311 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAGEASR [R].iAGEASR.[L] N-Term(TMT6plex) 4 Q64525 Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64525; P10854; Q64478; Q6ZWY9 Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3 0 2 2 0.1844 0 1 1 1 466.77209 932.53691 932.53626 0.7 0.00033 0/0 0 0 66361464 HCD 30 MS2 20.67738 544.9 15.999 36.7687 8431 8431 8430 QEplus033719.raw F4 597.5 551.3 583.8 380.5 776.8 379.7 216 2.44 1 FALSE 0.001125 0.01495 0.333 -250 26321 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EELQDR [K].eELQDR.[L] N-Term(TMT6plex) 2 Q91WQ3 "Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3" Q91WQ3; A2A7S7 "Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3; Tyrosine--tRNA ligase OS=Mus musculus OX=10090 GN=Yars PE=1 SV=1" 0 2 2 0.2422 0 1 1 1 509.77237 1018.53746 1018.53665 0.79 0.0004 0/0 0 0 39168768 HCD 30 MS2 18.43358 589.3 33.396 36.7734 8433 8433 8430 QEplus033719.raw F4 695.2 394.1 562.9 584.4 646.2 653.1 178 2.23 1 FALSE 0.002869 0.05655 0.123 -250 26327 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEAVGEQAR [K].aEAVGEQAR.[G] N-Term(TMT6plex) 2 Q8JZQ9 Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=1 SV=1 Q8JZQ9; Q8CIJ3 Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=2 SV=1 0 2 2 0.523 0 1 1 1 580.31854 1159.62981 1159.62687 2.54 0.00147 0/0 0 0 16198033 HCD 30 MS2 18.40179 718.4 101.57 36.7783 8435 8435 8430 QEplus033719.raw F4 766.9 568.3 689 653.2 803.6 829.4 222 3.04 1 FALSE 1.14E-05 0.0003172 0.761 -250 26338 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVDADEEDSR [K].dVDADEEDSR.[K] N-Term(TMT6plex) 2 Q99L45 Eukaryotic translation initiation factor 2 subunit 2 OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1 E0CXJ3; Q99L45 Eukaryotic translation initiation factor 2 subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1; Eukaryotic translation initiation factor 2 subunit 2 OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1 0 2 2 0.8963 0 1 1 1 690.30811 1379.60893 1379.6124 -2.51 -0.00173 0/0 0 0 5637861 HCD 30 MS2 26.55643 215.2 110 36.7833 8437 8437 8430 QEplus033719.raw F4 223.5 170.6 237.2 175.1 241.5 243.4 17 3.76 1 FALSE 1.14E-05 0.0001049 0.853 -250 26343 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYEEPDR [K].gYEEPDR.[Y] N-Term(TMT6plex) 2 Q62351 Transferrin receptor protein 1 OS=Mus musculus OX=10090 GN=Tfrc PE=1 SV=1 Q8C872; Q62351 Transferrin receptor protein 1 OS=Mus musculus OX=10090 GN=Tfrc PE=1 SV=1; Transferrin receptor protein 1 OS=Mus musculus OX=10090 GN=Tfrc PE=1 SV=1 0 2 2 0.3493 0 1 1 1 547.77094 1094.53459 1094.53157 2.76 0.00151 0/0 0 0 5507921 HCD 30 MS2 17.88926 407.8 110 36.7858 8438 8438 8430 QEplus033719.raw F4 451.5 198.6 373.9 563.8 301 558 85 2.72 1 FALSE 0.0001707 0.003934 0.529 -250 26354 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARPATASAPATSS [R].aRPATASAPATSS.[-] N-Term(TMT6plex) 2 Q6KAQ0 MFLJ00211 protein (Fragment) OS=Mus musculus OX=10090 GN=Nsmce3 PE=2 SV=1 Q6KAQ0; Q9CPR8 MFLJ00211 protein (Fragment) OS=Mus musculus OX=10090 GN=Nsmce3 PE=2 SV=1; Non-structural maintenance of chromosomes element 3 homolog OS=Mus musculus OX=10090 GN=Nsmce3 PE=1 SV=1 0 2 2 0.7615 0 1 1 1 708.88733 1416.76738 1416.76442 2.09 0.00148 0/0 0 0 2292389.5 HCD 30 MS2 21.41005 58.2 110 36.7908 8440 8440 8430 QEplus033719.raw F4 68.2 31.2 51 77 61.7 59.9 321 2.6 1 FALSE 1.14E-05 0.0001627 0.817 -250 26374 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTYVER [K].gTYVER.[D] N-Term(TMT6plex) 3 Q62189 U1 small nuclear ribonucleoprotein A OS=Mus musculus OX=10090 GN=Snrpa PE=1 SV=3 Q9CXX7; Q62189; D3Z0S6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Snrpa PE=2 SV=1; U1 small nuclear ribonucleoprotein A OS=Mus musculus OX=10090 GN=Snrpa PE=1 SV=3; U1 small nuclear ribonucleoprotein A (Fragment) OS=Mus musculus OX=10090 GN=Snrpa PE=1 SV=1 0 2 2 0.2933 0 1 1 1 477.26663 953.52599 953.52536 0.66 0.00031 0/0 0 0 46285156 HCD 30 MS2 10.0497 569.9 28.266 36.8074 8446 8446 8441 QEplus033719.raw F4 499 552 594.8 449.8 769.1 554.8 87 2.25 1 FALSE 0.00459 0.08158 0.057 -250 26416 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDQGFR [R].eDQGFR.[L] N-Term(TMT6plex) 1 D3Z0M9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx23 PE=1 SV=1 D3Z0M9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx23 PE=1 SV=1 0 2 2 0.163 0 1 1 1 490.75397 980.50066 980.49988 0.8 0.00039 0/0 0 0 7713098 HCD 30 MS2 35.62519 563.1 110 36.8196 8451 8451 8441 QEplus033719.raw F4 599.4 465.2 521.4 577.7 638 577.1 98 2.27 1 FALSE 0.002343 0.04677 0.152 -250 26420 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLQTSQDAR [K].gLQTSQDAR.[F] N-Term(TMT6plex) 2 B2MWM9 Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 Q3UWP8; B2MWM9 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Calr PE=2 SV=1; Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 0 3 3 0.6352 0 1 1 1 402.22083 1204.64792 1204.64833 -0.34 -0.00014 0/0 0 0 7259729 HCD 30 MS2 33.58249 297.9 110 36.8269 8453 8453 8452 QEplus033719.raw F4 382.8 231.7 313.9 242 315.8 301.4 320 3.18 1 FALSE 3.35E-05 0.001219 0.644 -250 26434 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNQKPEVR [K].rNQkPEVR.[K] N-Term(TMT6plex); K4(TMT6plex) 2 Q3UW40 TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1 Q3UW40; Q8BP67 TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1; 60S ribosomal protein L24 OS=Mus musculus OX=10090 GN=Rpl24 PE=1 SV=2 1 4 4 0.4149 0 1 1 1 371.98242 1484.90786 1484.90617 1.14 0.00042 0/0 0 0 13719456 HCD 30 MS2 28.5238 318.4 73.199 36.8317 8455 8455 8452 QEplus033719.raw F4 416.3 210 331.7 358.5 305.5 288.1 276 2.41 1 FALSE 0.0005076 0.007915 0.441 -250 26450 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESVTTDAGR [K].eSVTTDAGR.[Y] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.5568 0 1 1 1 582.80725 1164.60723 1164.6058 1.23 0.00071 0/0 0 0 5370780.5 HCD 30 MS2 22.5463 385.3 110 36.8392 8458 8458 8452 QEplus033719.raw F4 419.2 150.9 282 647.5 248.2 564.3 216 2.73 2 FALSE 1.14E-05 1.24E-06 1.22 -250 26465 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGGTGLER [R].aGGTGLER.[G] N-Term(TMT6plex) 3 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q3UXJ8; Q8VHX6-2; Q8VHX6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flnc PE=2 SV=1; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.2252 0 1 1 1 495.28299 989.5587 989.55772 0.99 0.00049 0/0 0 0 43773852 HCD 30 MS2 12.37844 782.7 33.719 36.8439 8460 8460 8452 QEplus033719.raw F4 854.6 394.9 866.3 991.3 516.3 1072.8 215 2.22 1 FALSE 0.0006035 0.008963 0.422 -250 26491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLDQCR [K].dLDQcR.[D] N-Term(TMT6plex); C5(Carbamidomethyl) 2 Q3UF30 Calpactin I light chain OS=Mus musculus OX=10090 GN=S100a10 PE=2 SV=1 Q3UF30; Q3TC45 Calpactin I light chain OS=Mus musculus OX=10090 GN=S100a10 PE=2 SV=1; Calpactin I light chain OS=Mus musculus OX=10090 GN=S100a10 PE=1 SV=1 0 2 2 0.107 0 1 1 1 518.25861 1035.50994 1035.50906 0.85 0.00044 0/0 0 0 19391458 HCD 30 MS2 2.637549 698 105.558 36.8562 8464 8464 8463 QEplus033719.raw F4 666.2 668.3 760.4 519.7 932.3 640.9 80 2.15 1 FALSE 0.003658 0.06992 0.088 -250 26498 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTAGAQPR [K].vTAGAQPR.[A] N-Term(TMT6plex) 2 Q3UCV8 Ubiquitin thioesterase otulin OS=Mus musculus OX=10090 GN=Otulin PE=1 SV=1 Q3UCV8; A0A2I3BQB7 Ubiquitin thioesterase otulin OS=Mus musculus OX=10090 GN=Otulin PE=1 SV=1; Ubiquitin thioesterase otulin OS=Mus musculus OX=10090 GN=Otulin PE=1 SV=1 0 2 2 0.3712 0 1 1 1 514.80646 1028.60564 1028.60501 0.61 0.00031 0/0 0 0 7429037.5 HCD 30 MS2 20.00453 440.4 110 36.8587 8465 8465 8463 QEplus033719.raw F4 448.3 372.4 455.1 374.1 552.9 439.8 136 2.64 1 FALSE 1.14E-05 0.0007783 0.684 -250 26506 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISATGR [R].iSATGR.[G] N-Term(TMT6plex) 2 P26443 "Glutamate dehydrogenase 1, mitochondrial OS=Mus musculus OX=10090 GN=Glud1 PE=1 SV=1" P26443; Q3TSQ7 "Glutamate dehydrogenase 1, mitochondrial OS=Mus musculus OX=10090 GN=Glud1 PE=1 SV=1; Glutamate dehydrogenase (NAD(P)(+)) (Fragment) OS=Mus musculus OX=10090 GN=Glud1 PE=2 SV=1" 0 2 2 0.0714 0 1 1 1 417.25601 833.50475 833.50423 0.62 0.00026 0/0 0 0 22679980 HCD 30 MS2 50.25664 666.9 38.674 36.861 8466 8466 8463 QEplus033719.raw F4 713.6 585.4 712.1 627.1 742.8 620.7 53 1.96 1 FALSE 0.002869 0.0565 0.124 -250 26516 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSGLESSEAR [R].sSGLESSEAR.[Q] N-Term(TMT6plex) 2 Q99K28 ADP-ribosylation factor GTPase-activating protein 2 OS=Mus musculus OX=10090 GN=Arfgap2 PE=1 SV=1 Q99K28-2; Q99K28 Isoform 2 of ADP-ribosylation factor GTPase-activating protein 2 OS=Mus musculus OX=10090 GN=Arfgap2; ADP-ribosylation factor GTPase-activating protein 2 OS=Mus musculus OX=10090 GN=Arfgap2 PE=1 SV=1 0 2 2 0.4706 0 1 1 1 626.32251 1251.63774 1251.63783 -0.07 -0.00004 0/0 0 0 7824771.5 HCD 30 MS2 11.97112 312.9 110 36.8635 8467 8467 8463 QEplus033719.raw F4 306.8 256.1 354.6 243.3 374.6 342.1 144 3.4 1 FALSE 1.14E-05 4.04E-07 1.312 -250 26524 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SATEQSGTGIR [K].sATEQSGTGIR.[S] N-Term(TMT6plex) 3 B1AU25 "Apoptosis-inducing factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Aifm1 PE=1 SV=1" B1AU25; Q9Z0X1; Q2QKE3 "Apoptosis-inducing factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Aifm1 PE=1 SV=1; Apoptosis-inducing factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Aifm1 PE=1 SV=1; Apoptosis-inducing factor short isoform 1 OS=Mus musculus OX=10090 GN=Pdcd8 PE=2 SV=1" 0 2 2 0.6124 0 1 1 1 668.35754 1335.70781 1335.70657 0.93 0.00062 0/0 0 0 6574914.5 HCD 30 MS2 0 227.8 110 36.866 8468 8468 8463 QEplus033719.raw F4 236.5 201.6 261.2 223.4 203 241.1 296 4.18 1 FALSE 1.14E-05 1.80E-10 1.948 -250 26531 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVNTTQK [R].rVNTTQk.[R] N-Term(TMT6plex); K7(TMT6plex) 2 Q9D8E6 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3 Q9D8E6; Q9CSM5 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3; 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=2 SV=2 1 3 3 0.3295 0 1 1 1 435.60623 1304.80414 1304.80505 -0.7 -0.0003 0/0 0 0 6445175.5 HCD 30 MS2 39.32467 385.9 110 36.8685 8469 8469 8463 QEplus033719.raw F4 1161.6 158.1 236.1 161.5 246.3 352.1 417 2.61 1 FALSE 0.001584 0.0242 0.25 -250 26560 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTNESLER [RK].gTNESLER.[Q-] N-Term(TMT6plex) 11 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 P03995; A0MTM0; A0A0A6YWC8; Q3TWV0; P03995-2; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Glial fibrillary acidic protein OS=Mus musculus OX=10090 GN=Gfap PE=1 SV=4; Glial fibrillary acidic protein (Fragment) OS=Mus musculus OX=10090 GN=Gfap PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Isoform 2 of Glial fibrillary acidic protein OS=Mus musculus OX=10090 GN=Gfap; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.2957 0 1 1 1 567.80133 1134.59538 1134.59523 0.13 0.00008 0/0 0 0 18874388 HCD 30 MS2 12.47065 519.3 92.271 36.8858 8475 8475 8474 QEplus033719.raw F4 501.4 533.4 530.6 373.9 687.5 488.9 219 3.01 2 FALSE 1.14E-05 0.0001334 0.833 -250 26569 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVDDDPNTAR [K].sVDDDPNTAR.[C] N-Term(TMT6plex) 5 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; A0A571BF46; A2AQB2; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 2 2 0.7248 0 1 1 1 659.8255 1318.64372 1318.64364 0.06 0.00004 0/0 0 0 9760540 HCD 30 MS2 0 277.4 110 36.8883 8476 8476 8474 QEplus033719.raw F4 289.4 122.5 265 415.7 146 425.6 85 3.27 1 FALSE 1.14E-05 3.03E-07 1.336 -250 26577 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGVLTHGR [K].qGVLTHGR.[V] N-Term(TMT6plex) 3 Q5BLK1 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1 Q3TL53; Q5BLK1; Q8BT09 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1 0 3 3 0.6455 0 1 1 1 366.21924 1096.64316 1096.64246 0.64 0.00023 0/0 0 0 42310356 HCD 30 MS2 30.64507 205.8 26.634 36.8906 8477 8477 8474 QEplus033719.raw F4 234.5 164.4 229.3 141.1 276.6 189.1 173 3.78 1 FALSE 1.14E-05 0.0001499 0.823 -250 26585 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDAGDR [K].iDAGDR.[F] N-Term(TMT6plex) 1 Q3TJD7 PDZ and LIM domain protein 7 OS=Mus musculus OX=10090 GN=Pdlim7 PE=1 SV=1 Q3TJD7 PDZ and LIM domain protein 7 OS=Mus musculus OX=10090 GN=Pdlim7 PE=1 SV=1 0 2 2 0.2537 0 1 1 1 438.24298 875.47869 875.47841 0.31 0.00014 0/0 0 0 12498734 HCD 30 MS2 65.33756 533.8 55.818 36.8973 8480 8480 8474 QEplus033719.raw F4 619.7 402.7 537.1 528 617.7 497.3 110 2.05 1 FALSE 0.002552 0.05016 0.142 -250 26593 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASPDTPPER [R].aSPDTPPER.[V] N-Term(TMT6plex) 5 E9PVA8 eIF-2-alpha kinase activator GCN1 OS=Mus musculus OX=10090 GN=Gcn1 PE=1 SV=1 Q640Q4; Q3U3Z4; E9PVA8; Q3UHQ5; Q8CHH7 Gcn1l1 protein (Fragment) OS=Mus musculus OX=10090 GN=Gcn1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Gcn1 PE=2 SV=1; eIF-2-alpha kinase activator GCN1 OS=Mus musculus OX=10090 GN=Gcn1 PE=1 SV=1; TOG domain-containing protein OS=Mus musculus OX=10090 GN=Gcn1 PE=2 SV=1; MKIAA0219 protein (Fragment) OS=Mus musculus OX=10090 GN=Gcn1 PE=2 SV=1 0 2 2 0.5336 0 1 1 1 599.81555 1198.62383 1198.62653 -2.26 -0.00135 0/0 0 0 2949981.25 HCD 30 MS2 47.16014 283.3 110 36.9021 8482 8482 8474 QEplus033719.raw F4 292.7 242 315.2 236.2 299.9 313.7 144 2.83 1 FALSE 0.001083 0.0141 0.344 -250 26601 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAQCQDQSSR [R].lAQcQDQSSR.[HL] N-Term(TMT6plex); C4(Carbamidomethyl) 2 A0A0R4J086 Olfactomedin-like protein 3 OS=Mus musculus OX=10090 GN=Olfml3 PE=1 SV=1 A0A0R4J086; Q8BK62 Olfactomedin-like protein 3 OS=Mus musculus OX=10090 GN=Olfml3 PE=1 SV=1; Olfactomedin-like protein 3 OS=Mus musculus OX=10090 GN=Olfml3 PE=2 SV=2 0 2 2 0.7375 0 1 1 1 711.35413 1421.70098 1421.70044 0.37 0.00027 0/0 0 0 1439428 HCD 30 MS2 0 73.2 110 36.9046 8483 8483 8474 QEplus033719.raw F4 62.6 51.4 96.7 82.3 68.5 77.6 140 3.01 1 FALSE 1.14E-05 4.60E-07 1.301 -250 26610 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQGELER [K].dQGELER.[Q] N-Term(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q8VDD5; Q8BIE2 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 0 2 2 0.3056 0 1 1 1 538.28278 1075.55828 1075.55812 0.15 0.00008 0/0 0 0 7239728 HCD 30 MS2 47.50951 532.6 110 36.9144 8486 8486 8485 QEplus033719.raw F4 637.7 525.5 561.6 394.2 640.6 436.2 143 2.16 1 FALSE 0.009806 0.1909 -0.126 -250 26632 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGFRPSR [K].dGFRPSR.[S] N-Term(TMT6plex) 2 Q62351 Transferrin receptor protein 1 OS=Mus musculus OX=10090 GN=Tfrc PE=1 SV=1 Q8C872; Q62351 Transferrin receptor protein 1 OS=Mus musculus OX=10090 GN=Tfrc PE=1 SV=1; Transferrin receptor protein 1 OS=Mus musculus OX=10090 GN=Tfrc PE=1 SV=1 0 3 3 0.3843 0 1 1 1 355.19986 1063.58503 1063.58461 0.39 0.00014 0/0 0 0 30728126 HCD 30 MS2 47.01634 468 27.686 36.9214 8489 8489 8485 QEplus033719.raw F4 523.2 302.7 470.1 520 518.2 473.9 248 2.68 1 FALSE 0.002334 0.04666 0.152 -250 26641 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLAAAR [K].qLAAAR.[G] N-Term(TMT6plex) 10 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; Q3TYI8; B2RXX6; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.2386 0 1 1 1 429.77167 858.53606 858.53587 0.22 0.0001 0/0 0 0 29345706 HCD 30 MS2 16.9503 646.8 54.485 36.9237 8490 8490 8485 QEplus033719.raw F4 777.6 457 732.5 610.6 645.5 657.7 37 1.97 2 FALSE 0.005708 0.09579 0.018 -250 26651 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FHHTIGGSR [K].fHHTIGGSR.[R] N-Term(TMT6plex) 2 Q5M8Q0 Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1 Q5M8Q0; Q3U7D2 Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1; Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1 0 3 3 0.5507 0 1 1 1 414.22974 1240.67466 1240.67482 -0.13 -0.00005 0/0 0 0 16330747 HCD 30 MS2 27.71313 358.5 95.236 36.9259 8491 8491 8485 QEplus033719.raw F4 425.7 303 277.3 384.8 543.4 216.5 237 2.96 1 FALSE 1.14E-05 0.0008627 0.675 -250 26656 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEDTSAGTGDPPR [K].eEDTSAGTGDPPR.[K] N-Term(TMT6plex) 4 P56399 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 P56399; Q3U4W8; D3Z4K7; D3YYA5 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase 5 (Fragment) OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=8; Ubiquitin carboxyl-terminal hydrolase 5 (Fragment) OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 0 3 3 0.6713 0 1 1 1 520.91608 1560.73368 1560.73391 -0.15 -0.00008 0/0 0 0 10544870 HCD 30 MS2 0 172.8 110 36.9284 8492 8492 8485 QEplus033719.raw F4 182.2 137.4 194.5 172.3 187.2 163.2 55 4.35 1 FALSE 1.14E-05 1.10E-06 1.23 -250 26686 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVPSTER [K].dVPSTER.[M] N-Term(TMT6plex) 7 Q9DBH1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubtf PE=2 SV=1 Q9DBH1; Q05DS1; A2AWT7; P25976; A2AWT6; P25976-2; A2AWT5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubtf PE=2 SV=1; Ubtf protein (Fragment) OS=Mus musculus OX=10090 GN=Ubtf PE=2 SV=1; Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf PE=1 SV=1; Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf PE=1 SV=1; Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf PE=1 SV=1; Isoform UBF2 of Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf; Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf PE=1 SV=1 0 2 2 0.3519 0 1 1 1 516.78052 1032.55376 1032.5523 1.41 0.00073 0/0 0 0 19505222 HCD 30 MS2 0 655.5 110 36.9457 8498 8498 8496 QEplus033719.raw F4 679.6 684.2 665.9 465.4 828 610.1 300 2.7 1 FALSE 0.0002119 0.004339 0.518 -250 26707 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEDAYTSR [R].aEDAYTSR.[L] N-Term(TMT6plex) 5 A0A0R4J140 Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=1 A0A0R4J140; Q5SW19-2; Q5SW19-3; Z4YLI8; Q5SW19 Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=1; Isoform 2 of Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh; Isoform 3 of Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh; Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=1; Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=2 0 2 2 0.3463 0 1 1 1 571.28839 1141.56951 1141.56868 0.72 0.00041 0/0 0 0 7048066 HCD 30 MS2 0 380.5 110 36.9527 8501 8501 8496 QEplus033719.raw F4 384.2 269.1 461.2 327.7 368.1 472.8 68 2.83 1 FALSE 4.43E-05 0.00145 0.629 -250 26720 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YEEEEEQSR [R].yEEEEEQSR.[S] N-Term(TMT6plex) 2 G3X956 FACT complex subunit OS=Mus musculus OX=10090 GN=Supt16 PE=1 SV=1 G3X956; Q920B9 FACT complex subunit OS=Mus musculus OX=10090 GN=Supt16 PE=1 SV=1; FACT complex subunit SPT16 OS=Mus musculus OX=10090 GN=Supt16h PE=1 SV=2 0 2 2 0.6546 0 1 1 1 714.32916 1427.65105 1427.64878 1.59 0.00113 0/0 0 0 3019167.75 HCD 30 MS2 0 164 110 36.9578 8503 8503 8496 QEplus033719.raw F4 158.1 191.9 164.4 125.2 201.8 142.7 33 3.59 1 FALSE 1.14E-05 2.73E-05 0.964 -250 26735 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDDYRGGGDRYEDR [R].dDDYRGGGDRYEDR.[Y] N-Term(TMT6plex) 8 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 2 4 4 0.6136 0 1 1 1 480.21909 1917.85451 1917.85246 1.07 0.00051 0/0 0 0 5191661.5 HCD 30 MS2 24.77068 292.7 110 36.9625 8505 8505 8496 QEplus033719.raw F4 294.8 270.5 345.2 245.1 296.9 303.8 21 2.64 1 FALSE 0.0007816 0.01079 0.392 -250 26774 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVVTTGQR [K].gVVTTGQR.[D] N-Term(TMT6plex) 2 Q69ZJ6 MKIAA1436 protein (Fragment) OS=Mus musculus OX=10090 GN=Ptgfrn PE=2 SV=1 Q69ZJ6; Q9WV91 MKIAA1436 protein (Fragment) OS=Mus musculus OX=10090 GN=Ptgfrn PE=2 SV=1; Prostaglandin F2 receptor negative regulator OS=Mus musculus OX=10090 GN=Ptgfrn PE=1 SV=2 0 2 2 0.5475 0 1 1 1 523.81189 1046.6165 1046.61557 0.89 0.00046 0/0 0 0 4245681 HCD 30 MS2 50.28267 504.4 110 36.9843 8513 8513 8507 QEplus033719.raw F4 522.1 397.6 549.4 454.3 562.6 540.7 245 2.63 1 FALSE 1.14E-05 5.52E-05 0.906 -250 26788 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTCGANAK [K].dTcGANAk.[Q] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 1 O54962 Barrier-to-autointegration factor OS=Mus musculus OX=10090 GN=Banf1 PE=1 SV=1 O54962 Barrier-to-autointegration factor OS=Mus musculus OX=10090 GN=Banf1 PE=1 SV=1 0 2 2 0.4405 0 1 1 1 647.8457 1294.68413 1294.68256 1.21 0.00079 0/0 0 0 1575374 HCD 30 MS2 18.19769 191.5 110 36.9894 8515 8515 8507 QEplus033719.raw F4 206 133.5 201.4 161.5 153 293.4 257 2.52 1 FALSE 0.000262 0.005358 0.493 -250 26796 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSQLAQDER [R].qSQLAQDER.[V] N-Term(TMT6plex) 6 Q9ES00 Ubiquitin conjugation factor E4 B OS=Mus musculus OX=10090 GN=Ube4b PE=1 SV=3 Q9ES00; A0A571BD95; Q80TU3; A0A5F8MP95; Q6NWW1; G3UZD6 "Ubiquitin conjugation factor E4 B OS=Mus musculus OX=10090 GN=Ube4b PE=1 SV=3; Ubiquitin conjugation factor E4 B OS=Mus musculus OX=10090 GN=Ube4b PE=1 SV=1; MKIAA0684 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0684 PE=2 SV=1; Ubiquitin conjugation factor E4 B OS=Mus musculus OX=10090 GN=Ube4b PE=1 SV=1; Ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) OS=Mus musculus OX=10090 GN=Ube4b PE=2 SV=1; Ubiquitin conjugation factor E4 B OS=Mus musculus OX=10090 GN=Ube4b PE=1 SV=1" 0 2 2 0.4885 0 1 1 1 652.34644 1303.68559 1303.68036 4.02 0.00262 0/0 0 0 5360008 HCD 30 MS2 15.30349 289.9 110 36.9919 8516 8516 8507 QEplus033719.raw F4 309.9 273.4 314.9 199.6 358 283.6 233 2.62 1 FALSE 1.14E-05 2.70E-06 1.155 -250 26809 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTVHTQNDMER [K].dTVHTQNDMER.[L] N-Term(TMT6plex) 1 Q9WTU0 Lysine-specific demethylase PHF2 OS=Mus musculus OX=10090 GN=Phf2 PE=1 SV=2 Q9WTU0 Lysine-specific demethylase PHF2 OS=Mus musculus OX=10090 GN=Phf2 PE=1 SV=2 0 3 3 0.7894 0 1 1 1 525.58569 1574.74253 1574.74304 -0.32 -0.00017 0/0 0 0 3324874.25 HCD 30 MS2 63.16613 169.6 110 37.0017 8519 8519 8518 QEplus033719.raw F4 208.5 117.5 173.7 129.3 197.6 190.8 48 4.32 1 FALSE 1.14E-05 5.93E-07 1.281 -250 26824 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SANSPDGK [K].sANSPDGk.[K] N-Term(TMT6plex); K8(TMT6plex) 14 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q8C153; P58252; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3UZ14; Q3TK17; Q3TLB1; Q3TWX1; Q3TX47 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 0 2 2 0.5227 0 1 1 1 617.34656 1233.68584 1233.68394 1.54 0.00095 0/0 0 0 4354083.5 HCD 30 MS2 0 317.3 110 37.0067 8521 8521 8518 QEplus033719.raw F4 630.9 110.9 277 164.7 177 543.5 332 2.2 1 FALSE 0.0001603 0.003663 0.537 -250 26829 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APPASQPAQDGGR [R].aPPASQPAQDGGR.[S] N-Term(TMT6plex) 2 Q80UY1 Carnosine N-methyltransferase OS=Mus musculus OX=10090 GN=Carnmt1 PE=1 SV=1 A0A494BA54; Q80UY1 Carnosine N-methyltransferase OS=Mus musculus OX=10090 GN=Carnmt1 PE=1 SV=1; Carnosine N-methyltransferase OS=Mus musculus OX=10090 GN=Carnmt1 PE=1 SV=1 0 2 2 0.5692 0 1 1 1 740.88971 1480.77214 1480.77057 1.06 0.00079 0/0 0 0 2326170 HCD 30 MS2 0 52 110 37.0092 8522 8522 8518 QEplus033719.raw F4 53.4 48.1 47.2 43.5 68.2 51.7 247 2.53 1 FALSE 1.14E-05 5.23E-06 1.101 -250 26858 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQENEQIGR [K].aQENEQIGR.[V] N-Term(TMT6plex) 5 Q80Y98 Phospholipase DDHD2 OS=Mus musculus OX=10090 GN=Ddhd2 PE=1 SV=3 Q80Y98; A0A1B0GSA5; A0A1B0GS27; Q80Y98-3; Q80Y98-2 Phospholipase DDHD2 OS=Mus musculus OX=10090 GN=Ddhd2 PE=1 SV=3; Phospholipase DDHD2 OS=Mus musculus OX=10090 GN=Ddhd2 PE=1 SV=2; Phospholipase DDHD2 OS=Mus musculus OX=10090 GN=Ddhd2 PE=1 SV=1; Isoform 3 of Phospholipase DDHD2 OS=Mus musculus OX=10090 GN=Ddhd2; Isoform 2 of Phospholipase DDHD2 OS=Mus musculus OX=10090 GN=Ddhd2 0 2 2 0.6994 0 1 1 1 637.3385 1273.66973 1273.66979 -0.05 -0.00003 0/0 0 0 3937394.25 HCD 30 MS2 19.15626 194.5 110 37.0214 8527 8527 8518 QEplus033719.raw F4 206.8 161.6 204.8 138.5 232.6 222.7 224 3.46 1 FALSE 1.14E-05 4.79E-06 1.108 -250 26869 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQQEQQLAR [R].qQQEQQLAR.[M] N-Term(TMT6plex) 7 Q1LZM4 Tnrc6b protein (Fragment) OS=Mus musculus OX=10090 GN=Tnrc6b PE=2 SV=1 Q8BXV9; Q1LZM4; Q8BKI2; Q8BWL0; Q3TRH0; A0A2I3BRG1; Q3TRK2 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tnrc6b PE=2 SV=1; Tnrc6b protein (Fragment) OS=Mus musculus OX=10090 GN=Tnrc6b PE=2 SV=1; Trinucleotide repeat-containing gene 6B protein OS=Mus musculus OX=10090 GN=Tnrc6b PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tnrc6b PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tnrc6b PE=2 SV=1; Trinucleotide repeat-containing gene 6B protein (Fragment) OS=Mus musculus OX=10090 GN=Tnrc6b PE=1 SV=1; TNRC6-PABC_bdg domain-containing protein OS=Mus musculus OX=10090 GN=Tnrc6b PE=2 SV=1 0 2 2 0.6147 0 1 1 1 679.3739 1357.74053 1357.73854 1.46 0.00099 0/0 0 0 4704711 HCD 30 MS2 9.071027 154.8 110 37.0338 8531 8531 8529 QEplus033719.raw F4 154.4 142.1 180.3 111.5 157.5 182.7 283 3.4 1 FALSE 1.14E-05 9.55E-07 1.241 -250 26877 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGVLTHGR [K].qGVLTHGR.[V] N-Term(TMT6plex) 3 Q5BLK1 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1 Q3TL53; Q5BLK1; Q8BT09 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.6314 0 1 1 1 548.82629 1096.64531 1096.64246 2.6 0.00143 0/0 0 0 63050048 HCD 30 MS2 2.919503 519.4 23.661 37.0383 8533 8533 8529 QEplus033719.raw F4 521.3 423.5 556.9 446.4 608.7 559.4 171 2.55 1 FALSE 0.0002218 0.004708 0.508 -250 26884 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APSTSDSVR [R].aPSTSDSVR.[L] N-Term(TMT6plex) 4 Q3UWX7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tcea1 PE=2 SV=1 P10711-2; E9PYD5; Q3UPE0; Q3UWX7 Isoform 1 of Transcription elongation factor A protein 1 OS=Mus musculus OX=10090 GN=Tcea1; Transcription elongation factor A protein 1 OS=Mus musculus OX=10090 GN=Tcea1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tcea1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tcea1 PE=2 SV=1 0 2 2 0.6525 0 1 1 1 574.80927 1148.61125 1148.61088 0.32 0.00019 0/0 0 0 48851372 HCD 30 MS2 18.9073 457.7 32.49 37.0406 8534 8534 8529 QEplus033719.raw F4 479.6 445.4 446.1 318 659 398.2 230 3.05 1 FALSE 1.14E-05 0.0001554 0.82 -250 26891 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAAEAYR [K].eAAEAYR.[A] N-Term(TMT6plex) 4 G3X8Y3 "N-alpha-acetyltransferase 15, NatA auxiliary subunit OS=Mus musculus OX=10090 GN=Naa15 PE=1 SV=1" A0A0A6YW80; G3X8Y3; Q80UM3; Q8K2S4 "N-alpha-acetyltransferase 15, NatA auxiliary subunit OS=Mus musculus OX=10090 GN=Naa15 PE=1 SV=1; N-alpha-acetyltransferase 15, NatA auxiliary subunit OS=Mus musculus OX=10090 GN=Naa15 PE=1 SV=1; N-alpha-acetyltransferase 15, NatA auxiliary subunit OS=Mus musculus OX=10090 GN=Naa15 PE=1 SV=1; Narg1 protein OS=Mus musculus OX=10090 GN=Naa15 PE=2 SV=1" 0 2 2 0.5339 0 1 1 1 519.77496 1038.54265 1038.54174 0.88 0.00046 0/0 0 0 22002556 HCD 30 MS2 6.440969 798.7 89.944 37.0428 8535 8535 8529 QEplus033719.raw F4 794.5 661.8 839.8 652.2 1050.4 793.2 128 2.36 1 FALSE 0.0003496 0.006889 0.46 -250 26899 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSPDTLRR [R].tSPDTLRR.[V] N-Term(TMT6plex) 3 Q8C671 Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=2 SV=1 Q06477; Q8C671; Q62093 IFN-response element binding factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Srsf2 PE=2 SV=1; Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=2 SV=1; Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=1 SV=4 1 3 3 0.4866 0 1 1 1 392.22968 1174.67447 1174.67415 0.27 0.00011 0/0 0 0 20715162 HCD 30 MS2 26.74745 468.6 57.994 37.0451 8536 8536 8529 QEplus033719.raw F4 592.6 432.7 470.4 312.6 557.5 445.8 375 3.35 1 FALSE 1.14E-05 0.0001925 0.803 -250 26923 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANEALR [K].aNEALR.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.1502 0 1 1 1 451.76685 902.52641 902.5257 0.8 0.00036 0/0 0 0 102314240 HCD 30 MS2 6.574075 462.6 13.681 37.0594 8541 8541 8540 QEplus033719.raw F4 511.9 355.4 481.3 440.7 549.4 436.8 171 2.13 2 FALSE 0.005838 0.09734 0.014 -250 26931 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRVGAPGPAGAR [R].gRVGAPGPAGAR.[G] N-Term(TMT6plex) 3 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 1 3 3 0.6476 0 1 1 1 432.25769 1294.75852 1294.75413 3.39 0.00146 0/0 0 0 8984085 HCD 30 MS2 54.04764 467.3 110 37.0619 8542 8542 8540 QEplus033719.raw F4 527.2 409.8 459.4 274.9 696.8 435.5 323 4.54 1 FALSE 1.14E-05 1.74E-07 1.381 -250 26938 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QALEAR [RK].qALEAR.[LA] N-Term(TMT6plex) 9 Q5BKQ9 "Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 11 OS=Mus musculus OX=10090 GN=Psmd11 PE=1 SV=1" Q8K2N7; Q5BKQ9; Q497E8; Q3UWW9; Q7TMI0; Q3THG2; Q3T052; G3UZ33; Q8BK73 "Psmd11 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmd11 PE=2 SV=1; Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 11 OS=Mus musculus OX=10090 GN=Psmd11 PE=1 SV=1; Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 11 OS=Mus musculus OX=10090 GN=Psmd11 PE=2 SV=1; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd11 PE=2 SV=1; Psmd11 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmd11 PE=2 SV=1; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd11 PE=2 SV=1; TREMBL:Q3T052;Q5EA67 (Bos taurus) Inter-alpha (Globulin) inhibitor H4; 26S proteasome non-ATPase regulatory subunit 11 (Fragment) OS=Mus musculus OX=10090 GN=Psmd11 PE=1 SV=1; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd11 PE=2 SV=1" 0 2 2 0.12 0 1 1 1 458.7746 916.54192 916.54135 0.62 0.00029 0/0 0 0 34597312 HCD 30 MS2 14.13825 754.4 56.226 37.0642 8543 8543 8540 QEplus033719.raw F4 809.8 592.3 724.5 710.5 935.4 753.8 226 2 1 TRUE 0.001938 0.03332 0.201 -250 26956 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVAAPQDGSPR [K].rVAAPQDGSPR.[A] N-Term(TMT6plex) 2 Q80VJ2 Steroid receptor RNA activator 1 OS=Mus musculus OX=10090 GN=Sra1 PE=1 SV=3 Q80VJ2; G3X8R2 Steroid receptor RNA activator 1 OS=Mus musculus OX=10090 GN=Sra1 PE=1 SV=3; Steroid receptor RNA activator 1 (Fragment) OS=Mus musculus OX=10090 GN=Sra1 PE=1 SV=1 1 3 3 0.6902 0 1 1 1 461.59546 1382.77182 1382.77018 1.19 0.00055 0/0 0 0 14693683 HCD 30 MS2 20.51464 355.9 110 37.0689 8545 8545 8540 QEplus033719.raw F4 412.3 280 354.2 321.1 396.2 371.8 355 5.1 1 FALSE 1.14E-05 4.36E-12 2.255 -250 26981 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGEDEAVCAR [R].gGEDEAVcAR.[S] N-Term(TMT6plex); C8(Carbamidomethyl) 3 B2RWW1 Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=2 SV=1 B2RWW1; A0A1D5RLY6; Q8C052 Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=2 SV=1; Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=1 SV=1; Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=1 SV=2 0 2 2 0.6529 0 1 1 1 646.80835 1292.60942 1292.61023 -0.62 -0.0004 0/0 0 0 2405624.25 HCD 30 MS2 16.93783 162.9 110 37.0789 8549 8549 8540 QEplus033719.raw F4 179.9 118 184.5 159.7 141.4 193.9 50 3.14 1 FALSE 1.14E-05 7.35E-06 1.073 -250 26996 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SACGVCPGR [K].sAcGVcPGR.[L] N-Term(TMT6plex); C3(Carbamidomethyl); C6(Carbamidomethyl) 3 Q9D1R9 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=2 A0A0G2JGY8; Q9D1R9; A0A0G2JEY6 60S ribosomal protein L34 (Fragment) OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=4; 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=2; 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=1 0 2 2 0.5725 0 1 1 1 596.79279 1192.57829 1192.57643 1.56 0.00093 0/0 0 0 57632460 HCD 30 MS2 8.220338 384.4 21.316 37.0887 8552 8552 8551 QEplus033719.raw F4 347.1 321.7 448.9 348.8 388.2 451.5 70 2.76 1 FALSE 1.14E-05 0.0004251 0.736 -250 27001 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IENHEGVR [K].iENHEGVR.[R] N-Term(TMT6plex) 2 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm 0 3 3 0.5446 0 1 1 1 394.88611 1182.64377 1182.64285 0.78 0.00031 0/0 0 0 33763016 HCD 30 MS2 30.77225 318.9 25.83 37.091 8553 8553 8551 QEplus033719.raw F4 669.4 207.6 275.8 206.3 286.4 267.6 234 3.36 2 FALSE 1.14E-05 0.0007002 0.693 -250 27007 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IASEASR [R].iASEASR.[L] N-Term(TMT6plex) 12 Q64475 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3 Q64475; Q8CGP2; Q8CGP1; A0JNS9; P70696; Q9D2U9; Q8CGP2-2; Q8CBB6; Q8CGP0; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Histone H2B type 3-A OS=Mus musculus OX=10090 GN=Hist3h2ba PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 3-B OS=Mus musculus OX=10090 GN=H2bu1 PE=1 SV=3; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 0 2 2 0.3971 0 1 1 1 481.77798 962.54869 962.54683 1.94 0.00093 0/0 0 0 243619328 HCD 30 MS2 2.089829 612.6 6.133 37.0933 8554 8554 8551 QEplus033719.raw F4 734.3 700.6 656.7 364 842.9 377.3 160 2.72 1 FALSE 0.001177 0.01572 0.324 -250 27015 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLACAR [R].qLAcAR.[I] N-Term(TMT6plex); C4(Carbamidomethyl) 2 Q99LF4 RNA-splicing ligase RtcB homolog OS=Mus musculus OX=10090 GN=Rtcb PE=1 SV=1 Q99LF4; Q3TJ01 RNA-splicing ligase RtcB homolog OS=Mus musculus OX=10090 GN=Rtcb PE=1 SV=1; RNA-splicing ligase RtcB homolog OS=Mus musculus OX=10090 GN=Rtcb PE=2 SV=1 0 2 2 0.3446 0 1 1 1 474.26895 947.53063 947.5294 1.29 0.00061 0/0 0 0 47591324 HCD 30 MS2 12.24536 633.7 29.452 37.0978 8556 8556 8551 QEplus033719.raw F4 674.8 466.6 662.4 596.9 800.5 601.2 210 1.77 1 FALSE 0.005488 0.09296 0.026 -250 27025 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAYVSR [R-].dAYVSR.[L] N-Term(TMT6plex) 8 Q3UB84; Q3TXK9 Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1;Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1 P47791-2; Q91Z57; Q3UB84; Q3UAS7; Q3U9R7; P47791; Q3TXK9; Q3TWI5 "Isoform Cytoplasmic of Glutathione reductase, mitochondrial OS=Mus musculus OX=10090 GN=Gsr; Glutathione-disulfide reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1; Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1; Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1; Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1; Glutathione reductase, mitochondrial OS=Mus musculus OX=10090 GN=Gsr PE=1 SV=3; Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1; Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1" 0 2 2 0.1542 0 1 1 1 470.25912 939.51097 939.50971 1.34 0.00063 0/0 0 0 43855496 HCD 30 MS2 3.926676 550.1 32.237 37.1 8557 8557 8551 QEplus033719.raw F4 539.9 621.3 628.4 409.1 609.4 492.4 49 2.53 2 FALSE 0.005254 0.08959 0.035 -250 27033 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDEHGYISR [R].qDEHGYISR.[C] N-Term(TMT6plex) 5 Q545F4 Heat shock 27 kDa protein OS=Mus musculus OX=10090 GN=Hspb1 PE=2 SV=1 Q9Z2L2; Q545F4; D3YZ06; P14602-3; P14602-2 Truncated hsp25 (Fragment) OS=Mus musculus OX=10090 GN=Hspb1 PE=2 SV=1; Heat shock 27 kDa protein OS=Mus musculus OX=10090 GN=Hspb1 PE=2 SV=1; Heat shock protein beta-1 OS=Mus musculus OX=10090 GN=Hspb1 PE=1 SV=1; Isoform C of Heat shock protein beta-1 OS=Mus musculus OX=10090 GN=Hspb1; Isoform B of Heat shock protein beta-1 OS=Mus musculus OX=10090 GN=Hspb1 0 3 3 0.6923 0 1 1 1 445.22858 1333.67118 1333.66979 1.04 0.00046 0/0 0 0 31326538 HCD 30 MS2 44.80267 643.9 49.501 37.1023 8558 8558 8551 QEplus033719.raw F4 711.9 477.7 678.7 617.3 699.9 677.8 162 4.16 1 FALSE 1.14E-05 5.42E-06 1.098 -250 27044 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQGGYGGSSSSSSYGSGR [R].nQGGYGGSSSSSSYGSGR.[R] N-Term(TMT6plex) 6 Q3UK83 Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1 Q3TFB1; Q3UK83; P49312; Q3U7F3; Q3TIK8; Q5EBP8 Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=2; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=1 0 3 3 0.8806 0 1 1 1 641.95978 1923.86478 1923.86303 0.91 0.00058 0/0 0 0 6125936.5 HCD 30 MS2 19.98239 101.7 110 37.1071 8560 8560 8551 QEplus033719.raw F4 93.8 94.9 111.6 95.5 117.5 96.8 34 6.45 1 FALSE 1.14E-05 6.31E-16 3.29 -250 27054 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARVEVER [K].aRVEVER.[D] N-Term(TMT6plex) 9 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 1 3 3 0.3187 0 1 1 1 363.21927 1087.64325 1087.64212 1.04 0.00038 0/0 0 0 192033200 HCD 30 MS2 9.766311 332.1 7.472 37.1169 8563 8563 8562 QEplus033719.raw F4 288.9 369 360 216.4 437.4 320.9 285 2.73 2 FALSE 0.007222 0.1145 -0.03 -250 27063 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQGGYGGSSSSSSYGSGR [R].nQGGYGGSSSSSSYGSGR.[R] N-Term(TMT6plex) 6 Q3UK83 Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1 Q3TFB1; Q3UK83; P49312; Q3U7F3; Q3TIK8; Q5EBP8 Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=2; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=1 0 2 2 0.9282 0 1 1 1 962.43573 1923.86418 1923.86303 0.6 0.00058 0/0 0 0 8602005 HCD 30 MS2 15.1589 49.6 110 37.1194 8564 8564 8562 QEplus033719.raw F4 40.7 53.2 52.7 36.2 77.4 37.2 34 5.71 1 FALSE 1.14E-05 6.31E-16 3.786 -250 27070 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECDNALR [K].ecDNALR.[EQ] N-Term(TMT6plex); C2(Carbamidomethyl) 12 A0A1L1SQ51; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1;Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q71LX4; Q68FD6; A0A1L1SRI1; Q80TM2; A0A1L1SQ51; B2RY15; Q8CHG4; Q8CDM9; Q0V930; Q3UHS6; E9PUM4; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=3; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; MKIAA0320 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.6638 0 1 1 1 553.77679 1106.54631 1106.54617 0.13 0.00007 0/0 0 0 63144876 HCD 30 MS2 13.56685 539 19.675 37.1239 8566 8566 8562 QEplus033719.raw F4 607.6 456.3 540.8 405.4 765.6 458.2 76 2.35 2 FALSE 0.002233 0.04308 0.164 -250 27076 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQQAITEHR [K].aQQAITEHR.[E] N-Term(TMT6plex) 1 Q80ZS3 "28S ribosomal protein S26, mitochondrial OS=Mus musculus OX=10090 GN=Mrps26 PE=1 SV=1" Q80ZS3 "28S ribosomal protein S26, mitochondrial OS=Mus musculus OX=10090 GN=Mrps26 PE=1 SV=1" 0 3 3 0.6696 0 1 1 1 428.24017 1282.70597 1282.70651 -0.43 -0.00018 0/0 0 0 23069950 HCD 30 MS2 17.56729 246.3 81.107 37.1262 8567 8567 8562 QEplus033719.raw F4 255.3 196.6 286.9 198.6 264.2 276.3 276 4.54 1 FALSE 1.14E-05 1.48E-07 1.395 -250 27081 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDGFDSR [R].gDGFDSR.[G] N-Term(TMT6plex) 9 A0A0N4SV32 Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1 A0A0N4SV40; A0A0N4SV32; Q9CY58-3; Q9CY58-4; Q3V274; Q3UJK2; Q9CY58; Q9CY58-2; Q3UMP4 Plasminogen activator inhibitor 1 RNA-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Isoform 3 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Isoform 4 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; HABP4_PAI-RBP1 domain-containing protein OS=Mus musculus OX=10090 GN=Serbp1 PE=2 SV=1; HABP4_PAI-RBP1 domain-containing protein OS=Mus musculus OX=10090 GN=Serbp1 PE=2 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=2; Isoform 2 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1 0 2 2 0.5625 0 1 1 1 491.7428 982.47832 982.47914 -0.84 -0.00041 0/0 0 0 14585024 HCD 30 MS2 45.3246 952.2 82.688 37.1284 8568 8568 8562 QEplus033719.raw F4 1099.1 598.7 972.3 857.6 1116.7 1068.8 36 2.24 1 FALSE 0.001736 0.02949 0.219 -250 27096 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDYEVDGR [K].rDYEVDGR.[D] N-Term(TMT6plex) 22 Q3UP61 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dlg1 PE=2 SV=1 Q91XM9-7; Q91XM9-2; Q91XM9-6; Q811D0-2; Q91XM9; Q3UP61; H7BWY4; A0A338P6J0; A0A2L2P595; Q811D0; Q91XM9-3; A0A2L2P590; A0A571BEK3; Q811D0-3; E9Q9H0; D3YUZ8; D3YWU0; D3Z3B8; Q91XM9-4; A0A571BEZ4; E9Q2L2; Q91XM9-8 Isoform 7 of Disks large homolog 2 OS=Mus musculus OX=10090 GN=Dlg2; Isoform 2 of Disks large homolog 2 OS=Mus musculus OX=10090 GN=Dlg2; Isoform 6 of Disks large homolog 2 OS=Mus musculus OX=10090 GN=Dlg2; Isoform 2 of Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1; Disks large homolog 2 OS=Mus musculus OX=10090 GN=Dlg2 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dlg1 PE=2 SV=1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1; Disks large homolog 2 OS=Mus musculus OX=10090 GN=Dlg2 PE=1 SV=2; Discs large MAGUK scaffold protein 2 eta OS=Mus musculus OX=10090 GN=Dlg2 PE=2 SV=1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1; Isoform 3 of Disks large homolog 2 OS=Mus musculus OX=10090 GN=Dlg2; Discs large MAGUK scaffold protein 2 gamma OS=Mus musculus OX=10090 GN=Dlg2 PE=2 SV=1; Disks large homolog 2 OS=Mus musculus OX=10090 GN=Dlg2 PE=1 SV=1; Isoform 3 of Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1; Disks large homolog 2 OS=Mus musculus OX=10090 GN=Dlg2 PE=1 SV=1; Disks large homolog 2 OS=Mus musculus OX=10090 GN=Dlg2 PE=1 SV=1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1; Isoform 4 of Disks large homolog 2 OS=Mus musculus OX=10090 GN=Dlg2; Disks large homolog 2 OS=Mus musculus OX=10090 GN=Dlg2 PE=1 SV=1; Disks large homolog 2 OS=Mus musculus OX=10090 GN=Dlg2 PE=1 SV=1; Isoform 8 of Disks large homolog 2 OS=Mus musculus OX=10090 GN=Dlg2 1 3 3 0.497 0 1 1 1 413.54916 1238.63294 1238.63268 0.21 0.00009 0/0 0 0 10860337 HCD 30 MS2 45.38978 519.1 110 37.1332 8570 8570 8562 QEplus033719.raw F4 539.3 426.1 627.4 434.4 561.6 525.6 194 3.38 1 FALSE 0.001142 0.01523 0.33 -250 27104 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQPPAEEEEGER [K].gQPPAEEEEGER.[A] N-Term(TMT6plex) 5 A0A1B0GRU3 Zinc finger CCCH domain-containing protein 4 OS=Mus musculus OX=10090 GN=Zc3h4 PE=1 SV=1 A0A1B0GRU3; Q6ZPZ3-2; E9Q8K8; Q6ZPZ3; Q6PAI8 Zinc finger CCCH domain-containing protein 4 OS=Mus musculus OX=10090 GN=Zc3h4 PE=1 SV=1; Isoform 2 of Zinc finger CCCH domain-containing protein 4 OS=Mus musculus OX=10090 GN=Zc3h4; Zinc finger CCCH domain-containing protein 4 OS=Mus musculus OX=10090 GN=Zc3h4 PE=1 SV=1; Zinc finger CCCH domain-containing protein 4 OS=Mus musculus OX=10090 GN=Zc3h4 PE=1 SV=2; Zc3h4 protein OS=Mus musculus OX=10090 GN=Zc3h4 PE=2 SV=2 0 2 2 0.7673 0 1 1 1 778.87384 1556.7404 1556.739 0.9 0.0007 0/0 0 0 3038590.75 HCD 30 MS2 0 72.4 110 37.1357 8571 8571 8562 QEplus033719.raw F4 76.2 80.7 74.7 42 93.6 67 69 4.04 1 FALSE 1.14E-05 7.18E-10 1.834 -250 27111 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSQEDSEDSEEK [K].nSQEDSEDSEEk.[D] N-Term(TMT6plex); K12(TMT6plex) 2 A0A087WRY3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Mus musculus OX=10090 GN=Nucks1 PE=1 SV=1 A0A087WRY3; Q80XU3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Mus musculus OX=10090 GN=Nucks1 PE=1 SV=1; Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Mus musculus OX=10090 GN=Nucks1 PE=1 SV=1 0 3 3 0.7745 0 1 1 1 618.95929 1854.86332 1854.86052 1.51 0.00093 0/0 0 0 2961864.75 HCD 30 MS2 0 202 110 37.1382 8572 8572 8562 QEplus033719.raw F4 238.8 143.3 201 126.2 273.4 229.5 62 4.08 1 FALSE 1.14E-05 4.65E-09 1.68 -250 27119 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQDNAAPETPSPR [R].rQDNAAPETPSPR.[R] N-Term(TMT6plex) 2 O35929 GTP-binding protein REM 1 OS=Mus musculus OX=10090 GN=Rem1 PE=1 SV=1 O35929; B2RWZ4 GTP-binding protein REM 1 OS=Mus musculus OX=10090 GN=Rem1 PE=1 SV=1; GTP-binding protein OS=Mus musculus OX=10090 GN=Rem1 PE=2 SV=1 1 3 3 0.7416 0 1 1 1 556.62659 1667.86521 1667.86626 -0.63 -0.00035 0/0 0 0 1635968.375 HCD 30 MS2 18.19891 114.8 110 37.1455 8574 8574 8573 QEplus033719.raw F4 140.2 89 114.3 100.1 131.9 113.3 263 5.07 1 FALSE 1.14E-05 9.93E-12 2.187 -250 27125 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EANQQQQFNR [R].eANQQQQFNR.[N] N-Term(TMT6plex) 11 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" Q3URW8; B9EKJ1; E9Q447; B2RXX6; A3KGU9; Q3V1V5; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.5738 0 1 1 1 746.37903 1491.75078 1491.75017 0.41 0.00031 0/0 0 0 5636976 HCD 30 MS2 9.316616 167.4 110 37.148 8575 8575 8573 QEplus033719.raw F4 186.2 140.7 202.3 142.2 145.4 187.8 168 3.66 2 FALSE 1.14E-05 2.39E-07 1.356 -250 27139 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARQEFEER [K].aRQEFEER.[M] N-Term(TMT6plex) 2 Q9CU62 Structural maintenance of chromosomes protein 1A OS=Mus musculus OX=10090 GN=Smc1a PE=1 SV=4 A0JLM6; Q9CU62 Structural maintenance of chromosomes protein 1A (Fragment) OS=Mus musculus OX=10090 GN=Smc1a PE=2 SV=1; Structural maintenance of chromosomes protein 1A OS=Mus musculus OX=10090 GN=Smc1a PE=1 SV=4 1 3 3 0.4444 0 1 1 1 431.89673 1293.67563 1293.67488 0.58 0.00025 0/0 0 0 19750352 HCD 30 MS2 42.41712 342.9 51.678 37.1548 8578 8578 8573 QEplus033719.raw F4 426.5 346.6 358.6 207.6 428.8 289 257 3.96 1 FALSE 1.14E-05 0.0001466 0.825 -250 27161 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDPNDQAQR [K].mDPNDQAQR.[D] N-Term(TMT6plex) 3 Q8BHL5 Engulfment and cell motility protein 2 OS=Mus musculus OX=10090 GN=Elmo2 PE=1 SV=1 Q8BHL5; Q8BHL5-2; Q8BHL5-3 Engulfment and cell motility protein 2 OS=Mus musculus OX=10090 GN=Elmo2 PE=1 SV=1; Isoform 2 of Engulfment and cell motility protein 2 OS=Mus musculus OX=10090 GN=Elmo2; Isoform 3 of Engulfment and cell motility protein 2 OS=Mus musculus OX=10090 GN=Elmo2 0 2 2 0.5962 0 1 1 1 652.31732 1303.62737 1303.62621 0.88 0.00058 0/0 0 0 6265504 HCD 30 MS2 44.65515 218.4 110 37.1623 8581 8581 8573 QEplus033719.raw F4 215 211.9 233.8 143.4 289.8 216.3 53 2.6 1 FALSE 0.0002719 0.00545 0.491 -250 27175 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAGGSGGAGGGEQNGQEEK [K].sAGGSGGAGGGEQNGQEEk.[W] N-Term(TMT6plex); K19(TMT6plex) 5 E9Q3M0 Mothers against decapentaplegic homolog OS=Mus musculus OX=10090 GN=Smad2 PE=1 SV=1 Q62432-2; E9Q3M0; E9Q5P9; Q62432; E9PXA8 Isoform Short of Mothers against decapentaplegic homolog 2 OS=Mus musculus OX=10090 GN=Smad2; Mothers against decapentaplegic homolog OS=Mus musculus OX=10090 GN=Smad2 PE=1 SV=1; Mothers against decapentaplegic homolog 2 (Fragment) OS=Mus musculus OX=10090 GN=Smad2 PE=1 SV=1; Mothers against decapentaplegic homolog 2 OS=Mus musculus OX=10090 GN=Smad2 PE=1 SV=2; Mothers against decapentaplegic homolog 2 (Fragment) OS=Mus musculus OX=10090 GN=Smad2 PE=1 SV=1 0 3 3 0.8051 0 1 1 1 712.35181 2135.04087 2135.03652 2.03 0.00145 0/0 0 0 1489336.125 HCD 30 MS2 0 52.3 110 37.1673 8583 8583 8573 QEplus033719.raw F4 57.1 46 54.9 35.3 73.1 47.2 170 5.85 1 FALSE 1.14E-05 2.03E-15 2.888 -250 27183 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVSSSSYR [R].sVSSSSYR.[R] N-Term(TMT6plex) 9 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; Q3TWV0; A2AKJ2; Q3U6S1; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.6135 0 1 1 1 551.29077 1101.57427 1101.57377 0.45 0.00025 0/0 0 0 98866632 HCD 30 MS2 6.77072 400.4 12.918 37.1746 8585 8585 8584 QEplus033719.raw F4 376.6 426.7 409.5 295.7 563.4 330.6 105 2.51 2 FALSE 5.44E-05 0.001859 0.605 -250 27191 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARQEFEER [K].aRQEFEER.[M] N-Term(TMT6plex) 2 Q9CU62 Structural maintenance of chromosomes protein 1A OS=Mus musculus OX=10090 GN=Smc1a PE=1 SV=4 A0JLM6; Q9CU62 Structural maintenance of chromosomes protein 1A (Fragment) OS=Mus musculus OX=10090 GN=Smc1a PE=2 SV=1; Structural maintenance of chromosomes protein 1A OS=Mus musculus OX=10090 GN=Smc1a PE=1 SV=4 1 2 2 0.0915 0 1 1 1 647.34076 1293.67424 1293.67488 -0.49 -0.00032 0/0 0 0 2518070.5 HCD 30 MS2 56.52813 146.2 110 37.1772 8586 8586 8584 QEplus033719.raw F4 162.3 127.4 157.5 100.2 179 150.5 228 1.64 1 FALSE 0.004914 0.08605 0.045 -250 27206 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVLATHSR [R].qVLATHSR.[K] N-Term(TMT6plex) 4 Q3TTM6 Alpha-MPP OS=Mus musculus OX=10090 GN=Pmpca PE=2 SV=1 Q3TTM6; Q3TY06; Q9DC61; Q3UDE0 Alpha-MPP OS=Mus musculus OX=10090 GN=Pmpca PE=2 SV=1; Alpha-MPP (Fragment) OS=Mus musculus OX=10090 GN=Pmpca PE=2 SV=1; Mitochondrial-processing peptidase subunit alpha OS=Mus musculus OX=10090 GN=Pmpca PE=1 SV=1; Alpha-MPP (Fragment) OS=Mus musculus OX=10090 GN=Pmpca PE=2 SV=1 0 3 3 0.5622 0 1 1 1 380.89438 1140.66858 1140.66867 -0.08 -0.00003 0/0 0 0 15384567 HCD 30 MS2 49.27102 376.3 53.266 37.1839 8589 8589 8584 QEplus033719.raw F4 780.5 150.4 226.1 431.2 425.1 244.6 190 3.7 1 FALSE 1.14E-05 2.14E-05 0.985 -250 27224 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECTDAAMR [K].ecTDAAMR.[A] N-Term(TMT6plex); C2(Carbamidomethyl) 6 Q8BH79 Anoctamin-10 OS=Mus musculus OX=10090 GN=Ano10 PE=1 SV=1 Q8BH79; Q8BH79-3; A0A1L1SS60; A0A1L1SR14; Q8BH79-2; Q8BH79-4 Anoctamin-10 OS=Mus musculus OX=10090 GN=Ano10 PE=1 SV=1; Isoform 3 of Anoctamin-10 OS=Mus musculus OX=10090 GN=Ano10; Anoctamin OS=Mus musculus OX=10090 GN=Ano10 PE=1 SV=1; Anoctamin-10 OS=Mus musculus OX=10090 GN=Ano10 PE=1 SV=1; Isoform 2 of Anoctamin-10 OS=Mus musculus OX=10090 GN=Ano10; Isoform 4 of Anoctamin-10 OS=Mus musculus OX=10090 GN=Ano10 0 2 2 0.5292 0 1 1 1 591.77594 1182.5446 1182.54446 0.12 0.00007 0/0 0 0 8112719 HCD 30 MS2 35.12301 473.7 110 37.1889 8591 8591 8584 QEplus033719.raw F4 552.9 364.6 508.8 410.5 510.3 494.9 30 2.57 1 FALSE 1.14E-05 0.0006974 0.694 -250 27232 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATPQGVTR [R].aTPQGVTR.[R] N-Term(TMT6plex) 5 G3X9Q6 La-related protein 4 OS=Mus musculus OX=10090 GN=Larp4 PE=1 SV=1 G3X9Q6; Q3UT02; Q8BWW4; A0A2R8VKL5; E9Q066 La-related protein 4 OS=Mus musculus OX=10090 GN=Larp4 PE=1 SV=1; HTH La-type RNA-binding domain-containing protein OS=Mus musculus OX=10090 GN=Larp4 PE=2 SV=1; La-related protein 4 OS=Mus musculus OX=10090 GN=Larp4 PE=1 SV=2; La-related protein 4 OS=Mus musculus OX=10090 GN=Larp4 PE=1 SV=1; La-related protein 4 OS=Mus musculus OX=10090 GN=Larp4 PE=1 SV=1 0 2 2 0.53 0 1 1 1 529.81165 1058.61601 1058.61557 0.42 0.00022 0/0 0 0 7514959.5 HCD 30 MS2 17.07293 431.1 110 37.1914 8592 8592 8584 QEplus033719.raw F4 415.8 378.8 508.5 276.2 492.7 514.8 172 2.83 1 FALSE 0.001894 0.03223 0.206 -250 27261 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQNEQTER [K].lQNEQTER.[K] N-Term(TMT6plex) 34 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q6A0E9; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; MKIAA0004 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0004 PE=4 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 2 2 0.4887 0 1 1 1 623.83417 1246.66106 1246.65889 1.74 0.00108 0/0 0 0 4936026.5 HCD 30 MS2 0 203.7 110 37.2063 8597 8597 8595 QEplus033719.raw F4 224.6 168.4 212.4 183.1 226.3 207.4 257 3.09 1 FALSE 1.14E-05 8.36E-05 0.872 -250 27267 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DREAAEGLGSHER [K].dREAAEGLGSHER.[A] N-Term(TMT6plex) 4 O08529 Calpain-2 catalytic subunit OS=Mus musculus OX=10090 GN=Capn2 PE=1 SV=4 Q3U3A8; Q8BPV9; O08529; Q3U8S5 Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1; Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1; Calpain-2 catalytic subunit OS=Mus musculus OX=10090 GN=Capn2 PE=1 SV=4; Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1 1 4 4 0.7788 0 1 1 1 414.71304 1655.83034 1655.82988 0.28 0.00012 0/0 0 0 33824644 HCD 30 MS2 6.962218 147.1 44.401 37.2085 8598 8598 8595 QEplus033719.raw F4 160 143.4 149.2 111.2 188.4 130.7 173 5.29 1 FALSE 1.14E-05 5.67E-12 2.234 -250 27272 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIGAAR [RK].eIGAAR.[LRS] N-Term(TMT6plex) 1 Q8QZU5 Ttpa protein (Fragment) OS=Mus musculus OX=10090 GN=Ttpa PE=2 SV=1 0 2 2 0.0693 0 1 1 1 423.25565 845.50401 845.50423 -0.26 -0.00011 0/0 0 0 29076382 HCD 30 MS2 27.50952 511.1 31.988 37.2108 8599 8599 8595 QEplus033719.raw F4 592.3 415.4 509.5 422.8 654.1 472.6 119 2.31 2 FALSE 0.002611 0.05165 0.137 -250 27273 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELGAAR [RK].eLGAAR.[LRS] N-Term(TMT6plex) 5 Q8BZR9; Q3UKJ7 Nuclear cap-binding protein subunit 3 OS=Mus musculus OX=10090 GN=Ncbp3 PE=1 SV=1;WD40 repeat-containing protein SMU1 OS=Mus musculus OX=10090 GN=Smu1 PE=2 SV=2 Q8BZR9; Q7TPS9; Q3UKJ7; Q3TLD7; Q3UKJ7-2 Nuclear cap-binding protein subunit 3 OS=Mus musculus OX=10090 GN=Ncbp3 PE=1 SV=1; Nuclear cap-binding protein subunit 3 (Fragment) OS=Mus musculus OX=10090 GN=Ncbp3 PE=2 SV=1; WD40 repeat-containing protein SMU1 OS=Mus musculus OX=10090 GN=Smu1 PE=2 SV=2; Nuclear cap-binding protein subunit 3 (Fragment) OS=Mus musculus OX=10090 GN=Ncbp3 PE=2 SV=1; Isoform 2 of WD40 repeat-containing protein SMU1 OS=Mus musculus OX=10090 GN=Smu1 0 2 2 0.0693 0 1 2 2 423.25565 845.50401 845.50423 -0.26 -0.00011 0/0 0 0 29076382 HCD 30 MS2 27.50952 511.1 31.988 37.2108 8599 8599 8595 QEplus033719.raw F4 592.3 415.4 509.5 422.8 654.1 472.6 119 2.31 2 FALSE 0.002611 0.05165 0.137 -250 27297 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGESELNR [K].eGESELNR.[I] N-Term(TMT6plex) 1 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 0 2 2 0.417 0 1 1 1 581.79901 1162.59075 1162.59015 0.52 0.0003 0/0 0 0 13456241 HCD 30 MS2 28.75022 652.9 110 37.2178 8602 8602 8595 QEplus033719.raw F4 634.6 582.6 700.6 480.2 914.8 604.6 135 2.47 1 FALSE 0.000108 0.00309 0.555 -250 27305 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDEHGYISR [R].qDEHGYISR.[C] N-Term(TMT6plex) 5 Q545F4 Heat shock 27 kDa protein OS=Mus musculus OX=10090 GN=Hspb1 PE=2 SV=1 Q9Z2L2; Q545F4; D3YZ06; P14602-3; P14602-2 Truncated hsp25 (Fragment) OS=Mus musculus OX=10090 GN=Hspb1 PE=2 SV=1; Heat shock 27 kDa protein OS=Mus musculus OX=10090 GN=Hspb1 PE=2 SV=1; Heat shock protein beta-1 OS=Mus musculus OX=10090 GN=Hspb1 PE=1 SV=1; Isoform C of Heat shock protein beta-1 OS=Mus musculus OX=10090 GN=Hspb1; Isoform B of Heat shock protein beta-1 OS=Mus musculus OX=10090 GN=Hspb1 0 2 2 0.6387 0 1 1 1 667.33789 1333.6685 1333.66979 -0.97 -0.00064 0/0 0 0 6016647.5 HCD 30 MS2 16.34396 213.1 110 37.2226 8604 8604 8595 QEplus033719.raw F4 265.6 143.4 203.4 231.7 208.7 225.9 150 3.1 1 FALSE 1.14E-05 2.32E-05 0.978 -250 27313 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNVATETTTR [R].sNVATETTTR.[H] N-Term(TMT6plex) 5 D3Z3Q3 Smoothelin OS=Mus musculus OX=10090 GN=Smtn PE=1 SV=1 D3Z3Q3; Q921U8; Q921U8-2; Q921U8-4; Q921U8-3 Smoothelin OS=Mus musculus OX=10090 GN=Smtn PE=1 SV=1; Smoothelin OS=Mus musculus OX=10090 GN=Smtn PE=1 SV=2; Isoform L2 of Smoothelin OS=Mus musculus OX=10090 GN=Smtn; Isoform S2 of Smoothelin OS=Mus musculus OX=10090 GN=Smtn; Isoform S1 of Smoothelin OS=Mus musculus OX=10090 GN=Smtn 0 2 2 0.5665 0 1 1 1 654.85236 1308.69744 1308.69567 1.35 0.00088 0/0 0 0 5357072.5 HCD 30 MS2 14.1335 240.7 110 37.2251 8605 8605 8595 QEplus033719.raw F4 257.9 156.6 324.7 199.5 167.2 338.4 302 3.46 1 FALSE 1.14E-05 1.82E-07 1.378 -250 27322 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLQTSQDAR [K].gLQTSQDAR.[F] N-Term(TMT6plex) 2 B2MWM9 Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 Q3UWP8; B2MWM9 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Calr PE=2 SV=1; Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 0 2 2 0.5048 0 1 1 1 602.828 1204.64873 1204.64833 0.33 0.0002 0/0 0 0 22845778 HCD 30 MS2 19.80953 291.4 46.246 37.2324 8607 8607 8606 QEplus033719.raw F4 263.6 236.3 311.4 253 361.9 322 303 3.15 1 FALSE 1.14E-05 3.53E-06 1.133 -250 27329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EANQQQQFNR [R].eANQQQQFNR.[N] N-Term(TMT6plex) 11 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" Q3URW8; B9EKJ1; E9Q447; B2RXX6; A3KGU9; Q3V1V5; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 3 3 0.5736 0 1 1 1 497.92197 1491.75135 1491.75017 0.79 0.00039 0/0 0 0 14011340 HCD 30 MS2 14.61603 430.2 93.926 37.2372 8609 8609 8606 QEplus033719.raw F4 500.8 321.1 449.4 338.4 510.3 461.2 169 3.33 2 FALSE 3.35E-05 0.001345 0.636 -250 27369 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNNGAPGNDGAK [R].gNNGAPGNDGAk.[G] N-Term(TMT6plex); K12(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 2 2 1 0 1 1 1 765.40765 1529.80803 1529.80724 0.52 0.0004 0/0 0 0 2984327.75 HCD 30 MS2 0 146.4 110 37.2621 8618 8618 8617 QEplus033719.raw F4 243.5 99.9 203.8 97.8 100.7 132.8 250 3.68 1 FALSE 1.14E-05 9.88E-10 1.808 -250 27377 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VMSTQR [R].vMSTQR.[VK] N-Term(TMT6plex) 8 P29341; Q99KW3 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2;TRIO and F-actin-binding protein OS=Mus musculus OX=10090 GN=Triobp PE=1 SV=3 P29341; Q3U8U8; Q99KW3-5; Q99KW3-2; Q99KW3; Q99KW3-4; Q8BN32; Q99KL3 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Isoform 5 of TRIO and F-actin-binding protein OS=Mus musculus OX=10090 GN=Triobp; Isoform 2 of TRIO and F-actin-binding protein OS=Mus musculus OX=10090 GN=Triobp; TRIO and F-actin-binding protein OS=Mus musculus OX=10090 GN=Triobp PE=1 SV=3; Isoform 4 of TRIO and F-actin-binding protein OS=Mus musculus OX=10090 GN=Triobp; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1 0 2 2 0.3304 0 1 1 1 475.76932 950.53136 950.52907 2.41 0.00115 0/0 0 0 8891993 HCD 30 MS2 6.849461 615 110 37.2671 8620 8620 8617 QEplus033719.raw F4 731 450.8 675.7 532.6 722.5 577.5 139 2.3 2 FALSE 0.005229 0.08935 0.036 -250 27387 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASPEMSDR [R].aSPEMSDR.[I] N-Term(TMT6plex) 8 F8VPM7 ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1 F8VPM7; V9GWT6; Q99MI1-2; V9GXP8; V9GXF0; V9GXH3; V9GX53; Q99MI1 ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; Isoform 2 of ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1; ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1; ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus OX=10090 GN=Erc1 PE=1 SV=1 0 2 2 0.6013 0 1 1 1 561.27716 1121.54704 1121.54584 1.07 0.0006 0/0 0 0 7024800 HCD 30 MS2 0 419.2 110 37.2696 8621 8621 8617 QEplus033719.raw F4 432.1 394.6 451.6 335.5 499.3 402.3 91 3.01 1 FALSE 1.14E-05 0.0003211 0.76 -250 27395 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRDVQDESYR [K].dRDVQDESYR.[L] N-Term(TMT6plex) 6 H7BX59 tRNA pseudouridine synthase A OS=Mus musculus OX=10090 GN=Pus1 PE=1 SV=1 Q9WU56-2; H7BX59; Q9WU56-3; Q9WU56-4; Q3TT85; Q9WU56 Isoform 2 of tRNA pseudouridine synthase A OS=Mus musculus OX=10090 GN=Pus1; tRNA pseudouridine synthase A OS=Mus musculus OX=10090 GN=Pus1 PE=1 SV=1; Isoform 3 of tRNA pseudouridine synthase A OS=Mus musculus OX=10090 GN=Pus1; Isoform 4 of tRNA pseudouridine synthase A OS=Mus musculus OX=10090 GN=Pus1; PseudoU_synth_1 domain-containing protein OS=Mus musculus OX=10090 GN=Pus1 PE=2 SV=1; tRNA pseudouridine synthase A OS=Mus musculus OX=10090 GN=Pus1 PE=1 SV=2 1 3 3 0.5982 0 1 1 1 504.58093 1511.72824 1511.72877 -0.34 -0.00017 0/0 0 0 5391519.5 HCD 30 MS2 56.78844 310.4 110 37.2721 8622 8622 8617 QEplus033719.raw F4 405.8 243.7 349 249.3 308.3 306.5 95 4.33 1 FALSE 1.14E-05 6.17E-06 1.087 -250 27403 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENAELAR [R].eNAELAR.[A] N-Term(TMT6plex) 2 Q69ZA9 MKIAA1766 protein (Fragment) OS=Mus musculus OX=10090 GN=Sbf2 PE=2 SV=1 Q69ZA9; Q80ZM6 MKIAA1766 protein (Fragment) OS=Mus musculus OX=10090 GN=Sbf2 PE=2 SV=1; Sbf2 protein (Fragment) OS=Mus musculus OX=10090 GN=Sbf2 PE=2 SV=1 0 2 2 0.2166 0 1 1 1 516.2865 1031.56572 1031.56829 -2.49 -0.00128 0/0 0 0 12343755 HCD 30 MS2 50.41855 843.6 95.798 37.2744 8623 8623 8617 QEplus033719.raw F4 1679.5 370.9 517 655.4 1371.4 467.2 245 2.17 1 FALSE 0.004881 0.08534 0.047 -250 27411 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVLATHSR [R].qVLATHSR.[K] N-Term(TMT6plex) 4 Q3TTM6 Alpha-MPP OS=Mus musculus OX=10090 GN=Pmpca PE=2 SV=1 Q3TTM6; Q3TY06; Q9DC61; Q3UDE0 Alpha-MPP OS=Mus musculus OX=10090 GN=Pmpca PE=2 SV=1; Alpha-MPP (Fragment) OS=Mus musculus OX=10090 GN=Pmpca PE=2 SV=1; Mitochondrial-processing peptidase subunit alpha OS=Mus musculus OX=10090 GN=Pmpca PE=1 SV=1; Alpha-MPP (Fragment) OS=Mus musculus OX=10090 GN=Pmpca PE=2 SV=1 0 2 2 0.3476 0 1 1 1 570.83887 1140.67046 1140.66867 1.57 0.00089 0/0 0 0 3523368 HCD 30 MS2 61.47682 326.3 110 37.2769 8624 8624 8617 QEplus033719.raw F4 342.9 188.2 328 343.2 293.8 461.6 185 2.1 1 FALSE 0.001028 0.0135 0.352 -250 27419 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DREAAEGLGSHER [K].dREAAEGLGSHER.[A] N-Term(TMT6plex) 4 O08529 Calpain-2 catalytic subunit OS=Mus musculus OX=10090 GN=Capn2 PE=1 SV=4 Q3U3A8; Q8BPV9; O08529; Q3U8S5 Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1; Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1; Calpain-2 catalytic subunit OS=Mus musculus OX=10090 GN=Capn2 PE=1 SV=4; Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1 1 2 2 0.6724 0 1 1 1 828.4187 1655.83013 1655.82988 0.15 0.00012 0/0 0 0 2252319.5 HCD 30 MS2 0 21.7 110 37.2794 8625 8625 8617 QEplus033719.raw F4 23.6 18.7 25.1 14.2 25.5 22.9 171 4.09 1 FALSE 1.14E-05 8.67E-08 1.439 -250 27431 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASSQSSAGAMTCR [R].aSSQSSAGAMTcR.[L] N-Term(TMT6plex); C12(Carbamidomethyl) 3 Q3UQS9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1 O55124; Q3UQS9; Q14BI5 M-protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1; Myomesin 2 OS=Mus musculus OX=10090 GN=Myom2 PE=1 SV=1 0 2 2 0.7556 0 1 1 1 771.86304 1542.7188 1542.72019 -0.9 -0.0007 0/0 0 0 2199479.75 HCD 30 MS2 0 46.6 110 37.2845 8627 8627 8617 QEplus033719.raw F4 53.7 14.5 32.5 94.2 17 67.6 62 3.6 1 FALSE 1.14E-05 1.42E-12 2.348 -250 27435 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CCTKPESER [R].ccTkPESER.[M] N-Term(TMT6plex); C1(Carbamidomethyl); C2(Carbamidomethyl); K4(TMT6plex) 1 P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor 0 2 2 0.4491 0 1 1 1 812.91357 1624.81987 1624.81873 0.7 0.00057 0/0 0 0 2583151.75 HCD 30 MS2 0 102.3 110 37.2943 8630 8630 8628 QEplus033719.raw F4 112.3 29.3 40.8 27.4 374.5 29.5 177 2.16 1 TRUE 0.002079 0.03896 0.178 -250 27439 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CHEGGQSYK [R].cHEGGQSYk.[I] N-Term(TMT6plex); C1(Carbamidomethyl); K9(TMT6plex) 14 P11276; A0A087WSN6; A0A087WQW8; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; B9EHT6; A0A087WR50; Q3UGY5; Q4KL80; A0A087WSN6; A0A087WQW8; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.8354 0 1 1 1 508.59433 1523.76844 1523.76768 0.49 0.00025 0/0 0 0 36005316 HCD 30 MS2 33.95776 828.2 61.968 37.2966 8631 8631 8628 QEplus033719.raw F4 1047.4 631.5 728.6 1323.2 789 449.5 182 4.07 4 FALSE 1.14E-05 1.73E-08 1.572 -250 27446 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAEAGSR [K].iAEAGSR.[M] N-Term(TMT6plex) 7 Q545R0 "Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1" Q61301-2; Q6NV50; E0CXB9; Q3TGQ3; Q61301-3; Q545R0; Q61301 "Isoform 2 of Catenin alpha-2 OS=Mus musculus OX=10090 GN=Ctnna2; Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=2 SV=1; Alpha N-catenin OS=Mus musculus OX=10090 GN=Ctnna2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctnna1 PE=2 SV=1; Isoform 3 of Catenin alpha-2 OS=Mus musculus OX=10090 GN=Ctnna2; Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1; Catenin alpha-2 OS=Mus musculus OX=10090 GN=Ctnna2 PE=1 SV=3" 0 2 2 0.0053 2 2 2 466.77225 932.53722 932.53626 1.03 0.00048 0/0 0 0 25445220 HCD 30 MS2 66.6767 654.7 31.086 37.2989 8632 8632 8628 QEplus033719.raw F4 684.9 616.6 721.4 515.4 800.1 589.5 216 1.86 1 FALSE 0.004449 0.0799 0.062 -250 27454 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CHEGGQSYK [R].cHEGGQSYk.[I] N-Term(TMT6plex); C1(Carbamidomethyl); K9(TMT6plex) 14 P11276; A0A087WSN6; A0A087WQW8; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; B9EHT6; A0A087WR50; Q3UGY5; Q4KL80; A0A087WSN6; A0A087WQW8; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.7762 0 1 1 1 762.38885 1523.77043 1523.76768 1.8 0.00138 0/0 0 0 1812551.625 HCD 30 MS2 0 181.1 110 37.3014 8633 8633 8628 QEplus033719.raw F4 242.4 140.2 156.4 332.7 142.1 72.5 184 3.53 4 FALSE 1.14E-05 5.90E-05 0.901 -250 27460 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARVDVER [R].aRVDVER.[D] N-Term(TMT6plex) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 1 3 3 0.3133 0 1 1 1 358.547 1073.62644 1073.62647 -0.03 -0.00001 0/0 0 0 8939528 HCD 30 MS2 30.54642 381.1 110 37.3039 8634 8634 8628 QEplus033719.raw F4 470.7 193.4 392.1 471.2 205.1 553.8 264 2.49 1 FALSE 0.005254 0.08962 0.035 -250 27488 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ACHQLHQEGK [R].acHQLHQEGk.[F] N-Term(TMT6plex); C2(Carbamidomethyl); K10(TMT6plex) 1 Q8CG76 Aflatoxin B1 aldehyde reductase member 2 OS=Mus musculus OX=10090 GN=Akr7a2 PE=1 SV=3 Q8CG76 Aflatoxin B1 aldehyde reductase member 2 OS=Mus musculus OX=10090 GN=Akr7a2 PE=1 SV=3 0 3 3 0.6302 0 1 1 1 555.96924 1665.89316 1665.88953 2.18 0.00121 0/0 0 0 1452368.5 HCD 30 MS2 68.48855 221.1 110 37.3237 8641 8641 8639 QEplus033719.raw F4 238 151.9 237.3 256.2 233.2 209.9 361 4.3 1 FALSE 1.14E-05 2.59E-08 1.539 -250 27496 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DREAAEGLGSHER [K].dREAAEGLGSHER.[A] N-Term(TMT6plex) 4 O08529 Calpain-2 catalytic subunit OS=Mus musculus OX=10090 GN=Capn2 PE=1 SV=4 Q3U3A8; Q8BPV9; O08529; Q3U8S5 Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1; Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1; Calpain-2 catalytic subunit OS=Mus musculus OX=10090 GN=Capn2 PE=1 SV=4; Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1 1 3 3 0.805 0 1 1 1 552.6153 1655.83133 1655.82988 0.88 0.00049 0/0 0 0 43463012 HCD 30 MS2 14.12389 217.7 33.138 37.326 8642 8642 8639 QEplus033719.raw F4 223.5 231.5 236.1 156.7 260.8 197.7 172 7.18 1 FALSE 1.14E-05 6.31E-16 3.628 -250 27502 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDSGYR [RK].vDSGYR.[SV] N-Term(TMT6plex) 8 A0A0A0MQ68; A1A4T2 "Glutaryl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gcdh PE=1 SV=1;Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1" A0A0A0MQ68; Q8BHN3-3; A0A1S6GWJ2; A1A4T2; Q3UE86; Q8BVD4; Q60759; Q8BHN3 "Glutaryl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gcdh PE=1 SV=1; Isoform 3 of Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab; Uncharacterized protein OS=Mus musculus OX=10090 GN=Gcdh PE=2 SV=1; Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Gal_mutarotas_2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Gcdh PE=2 SV=1; Glutaryl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gcdh PE=1 SV=2; Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab PE=1 SV=1" 0 2 2 0.2463 0 1 1 1 463.25159 925.4959 925.49406 1.98 0.00092 0/0 0 0 13348836 HCD 30 MS2 9.03232 852.2 110 37.3285 8643 8643 8639 QEplus033719.raw F4 894.6 686.2 904.3 806.3 946.2 875.8 51 2.03 2 FALSE 0.005439 0.0925 0.027 -250 27519 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETTGSESDGGDSSSTK [R].eTTGSESDGGDSSSTk.[S] N-Term(TMT6plex); K16(TMT6plex) 6 Q8R550-3 Isoform 3 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1 Q8R550-8; Q8R550-3; Q8R550; E9Q0C1; B1AZ85; Q3TA88 Isoform 8 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1; Isoform 3 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1; SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=1 SV=1; SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=1 SV=1; SH3 domain-containing kinase-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=2 SV=1 0 3 3 0.842 0 1 1 1 668.32007 2002.94565 2002.94531 0.17 0.00011 0/0 0 0 5560517 HCD 30 MS2 12.59132 225.6 110 37.3335 8645 8645 8639 QEplus033719.raw F4 225.3 183.6 255.9 190.3 266.1 232.5 84 5.38 1 FALSE 1.14E-05 2.13E-11 2.124 -250 27530 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNRDNTAGVYAR [R].dNRDNTAGVYAR.[R] N-Term(TMT6plex) 2 P55288 Cadherin-11 OS=Mus musculus OX=10090 GN=Cdh11 PE=1 SV=1 P55288; Q8C7Q6 Cadherin-11 OS=Mus musculus OX=10090 GN=Cdh11 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cdh11 PE=2 SV=1 1 3 3 0.6776 0 1 1 1 527.60406 1580.79764 1580.79785 -0.13 -0.00007 0/0 0 0 3423658.25 HCD 30 MS2 22.67322 179.8 110 37.3385 8647 8647 8639 QEplus033719.raw F4 195.1 128.2 167.8 169.4 244.4 173.6 184 4.9 1 FALSE 1.14E-05 1.41E-06 1.209 -250 27539 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KREPDDEGEEDD [R].kREPDDEGEEDD.[-] N-Term(TMT6plex); K1(TMT6plex) 2 O35381 Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 D3Z7M9; O35381 Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 2 3 3 0.6756 0 1 1 1 631.30316 1891.89493 1891.89215 1.47 0.00093 0/0 0 0 3341359.75 HCD 30 MS2 22.32504 122.9 110 37.341 8648 8648 8639 QEplus033719.raw F4 136.7 138.4 124.5 99.4 134.1 104.6 77 2.62 1 FALSE 0.001591 0.02493 0.245 -250 27547 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNQKPEVR [K].rNQkPEVR.[K] N-Term(TMT6plex); K4(TMT6plex) 2 Q3UW40 TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1 Q3UW40; Q8BP67 TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1; 60S ribosomal protein L24 OS=Mus musculus OX=10090 GN=Rpl24 PE=1 SV=2 1 4 4 0.3887 0 1 1 1 371.98157 1484.90444 1484.90617 -1.16 -0.00043 0/0 0 0 4155908.25 HCD 30 MS2 28.78873 269.3 110 37.3508 8651 8651 8650 QEplus033719.raw F4 367.5 196.7 286.4 266.3 255.4 243.5 245 2.47 1 FALSE 0.0006294 0.009672 0.41 -250 27567 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAQELAR [K].qAQELAR.[S] N-Term(TMT6plex) 3 Q3U2W7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Kras PE=2 SV=1 Q3U2W7; P32883; Q5J7N1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Kras PE=2 SV=1; GTPase KRas OS=Mus musculus OX=10090 GN=Kras PE=1 SV=1; Kras protein OS=Mus musculus OX=10090 GN=Kras PE=2 SV=1 0 2 2 0.3426 0 1 1 1 522.80402 1044.60076 1044.59992 0.8 0.00042 0/0 0 0 13412939 HCD 30 MS2 33.66459 784.4 110 37.3581 8654 8654 8650 QEplus033719.raw F4 722.8 775.5 842.1 590.5 992.9 782.4 289 2.51 1 FALSE 0.0001603 0.003658 0.537 -250 27588 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALHVNNDR [R].aLHVNNDR.[A] N-Term(TMT6plex) 1 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 0 3 3 0.3881 0 1 1 1 389.88705 1167.64661 1167.64319 2.93 0.00114 0/0 0 0 18975516 HCD 30 MS2 39.63223 208.4 63.174 37.3653 8657 8657 8650 QEplus033719.raw F4 246 187.5 225 162.9 238.2 191.1 232 2.86 1 FALSE 0.0002719 0.005456 0.491 -250 27611 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LASCSDDR [R].lAScSDDR.[T] N-Term(TMT6plex); C4(Carbamidomethyl) 2 Q99KN2 Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Mus musculus OX=10090 GN=Ciao1 PE=1 SV=1 Q99KN2; G3UYR5 Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Mus musculus OX=10090 GN=Ciao1 PE=1 SV=1; Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Mus musculus OX=10090 GN=Ciao1 PE=1 SV=1 0 2 2 0.6561 0 1 1 1 576.7807 1152.55412 1152.55165 2.14 0.00124 0/0 0 0 9300918 HCD 30 MS2 0 474.2 110 37.3728 8660 8660 8650 QEplus033719.raw F4 475.6 412.7 482 426.7 543.8 504.1 75 3.46 1 FALSE 1.14E-05 5.78E-05 0.902 -250 27619 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQQAHSEVK [K].eQQAHSEVk.[A] N-Term(TMT6plex); K9(TMT6plex) 5 A0A1W2P6H1 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2 A0A1W2P6H1; H7BX05; A2AAJ9; E9QQ96; Z4YJE4 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Obscurin OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3 0 3 3 0.5992 0 1 1 1 505.28391 1513.83716 1513.83748 -0.21 -0.00011 0/0 0 0 10690813 HCD 30 MS2 27.75362 512.9 110 37.3801 8662 8662 8661 QEplus033719.raw F4 1030.2 235.3 424.3 528.7 337.2 521.9 341 4.99 1 FALSE 1.14E-05 4.10E-09 1.691 -250 27628 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAPINSDSQGR [R].sAPINSDSQGR.[C] N-Term(TMT6plex) 1 Q3UJ95 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pip4k2b PE=1 SV=1 Q3UJ95 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pip4k2b PE=1 SV=1 0 2 2 0.755 0 1 1 1 680.8551 1360.70293 1360.70182 0.81 0.00055 0/0 0 0 11787621 HCD 30 MS2 0 254.4 110 37.3827 8663 8663 8661 QEplus033719.raw F4 281.1 207.3 280.3 242.2 199.2 316.2 186 3.47 1 FALSE 1.14E-05 3.76E-09 1.698 -250 27639 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YSGGNYR [R].ySGGNYR.[D] N-Term(TMT6plex) 2 Q8BG13; O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1;RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 Q8BG13; O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1; RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 0 2 2 0.5426 0 1 1 1 523.26727 1045.52727 1045.52642 0.81 0.00042 0/0 0 0 32263348 HCD 30 MS2 42.61984 717.7 33.077 37.3872 8665 8665 8661 QEplus033719.raw F4 637.9 737.8 777.6 516.9 985.9 649.9 57 2.23 2 FALSE 0.003674 0.07035 0.087 -250 27652 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AANFENHSGR [R].aANFENHSGR.[L] N-Term(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 3 3 0.6858 0 1 1 1 444.56046 1331.66681 1331.66538 1.08 0.00048 0/0 0 0 21163556 HCD 30 MS2 17.13046 515.5 70.604 37.3917 8667 8667 8661 QEplus033719.raw F4 625 414.7 546.9 430.1 595.3 480.8 127 4.52 1 FALSE 1.14E-05 4.09E-06 1.121 -250 27657 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHAALEPR [R].eHAALEPR.[H] N-Term(TMT6plex) 1 Q99KI0 "Aconitate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Aco2 PE=1 SV=1" Q99KI0 "Aconitate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Aco2 PE=1 SV=1" 0 3 3 0.5639 0 1 1 1 384.5506 1151.63724 1151.63704 0.18 0.00007 0/0 0 0 7524965 HCD 30 MS2 47.11527 371.8 109.394 37.3966 8669 8669 8661 QEplus033719.raw F4 405.1 287.7 408.5 342 416.1 371.4 251 3.99 1 FALSE 1.14E-05 2.05E-05 0.988 -250 27664 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLEDEACR [R].rLEDEAcR.[A] N-Term(TMT6plex); C7(Carbamidomethyl) 4 F8VQB6 Unconventional myosin-X OS=Mus musculus OX=10090 GN=Myo10 PE=1 SV=1 F8VQB6; F8VQB6-2; E9Q5G1; Q80TR9 Unconventional myosin-X OS=Mus musculus OX=10090 GN=Myo10 PE=1 SV=1; Isoform Headless of Unconventional myosin-X OS=Mus musculus OX=10090 GN=Myo10; Unconventional myosin-X OS=Mus musculus OX=10090 GN=Myo10 PE=1 SV=1; MKIAA0799 protein (Fragment) OS=Mus musculus OX=10090 GN=Myo10 PE=2 SV=1 1 2 2 0.5323 0 1 1 1 639.32892 1277.65056 1277.64695 2.83 0.0018 0/0 0 0 2219898.5 HCD 30 MS2 0 170.8 110 37.3992 8670 8670 8661 QEplus033719.raw F4 165.8 164.7 187.8 124.7 209.9 171.8 169 1.86 1 FALSE 0.001894 0.03226 0.206 -250 27687 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGVLTHGR [K].qGVLTHGR.[V] N-Term(TMT6plex) 3 Q5BLK1 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1 Q3TL53; Q5BLK1; Q8BT09 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1 0 3 3 0.7374 0 1 1 1 366.21854 1096.64106 1096.64246 -1.28 -0.00047 0/0 0 0 14515181 HCD 30 MS2 23.41027 242.1 94.328 37.4112 8674 8674 8672 QEplus033719.raw F4 264.8 221.3 249.9 184.9 274.2 257.2 181 3.96 1 FALSE 1.14E-05 6.71E-06 1.08 -250 27696 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESLADR [K].eSLADR.[A] N-Term(TMT6plex) 1 Q00PI9 Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Mus musculus OX=10090 GN=Hnrnpul2 PE=1 SV=2 Q00PI9 Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Mus musculus OX=10090 GN=Hnrnpul2 PE=1 SV=2 0 2 2 0.213 0 1 1 1 460.25641 919.50554 919.50463 0.99 0.00046 0/0 0 0 71098368 HCD 30 MS2 6.522073 594.7 20.166 37.4157 8676 8676 8672 QEplus033719.raw F4 613.4 540.8 602.7 495.4 756.7 559.4 156 2.3 1 FALSE 0.002732 0.05411 0.13 -250 27700 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNEVLDR [R].rNEVLDR.[W] N-Term(TMT6plex) 9 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; B2RXX6; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 1 3 3 0.2602 0 1 1 1 377.55432 1130.64841 1130.64794 0.42 0.00016 0/0 0 0 28551474 HCD 30 MS2 29.41253 348.5 38.189 37.418 8677 8677 8672 QEplus033719.raw F4 340.4 258.7 419.5 321.5 347.3 403.8 354 3.42 2 FALSE 1.14E-05 0.0002204 0.791 -250 27709 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STSTPTSPGPR [K].sTSTPTSPGPR.[T] N-Term(TMT6plex) 7 Q7TQH0 Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1 Q7TQH0-3; Q7TQH0; Q7TQH0-2; E9Q5Q0; Q3TGG2; Q3TYH7; A0A0U1RPL0 Isoform 3 of Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l; Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1; Isoform 2 of Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l; Ataxin-2-like protein (Fragment) OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=2; Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1; LsmAD domain-containing protein OS=Mus musculus OX=10090 GN=Atxn2l PE=2 SV=1; Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1 0 2 2 0.7323 0 1 1 1 658.85455 1316.70183 1316.70076 0.81 0.00054 0/0 0 0 13521972 HCD 30 MS2 3.251347 377 110 37.4205 8678 8678 8672 QEplus033719.raw F4 384.5 346.5 407.7 278.1 463.2 382.1 284 3.25 1 FALSE 1.14E-05 5.10E-05 0.913 -250 27718 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSVVTSSSSR [R].dSVVTSSSSR.[S] N-Term(TMT6plex) 7 Q8R5G0 Nidogen 2 protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1 Q8C6Z2; Q8R5G0; A0A286YCQ5; Q3US45; Q3TPN0; Q8CFA3; O88322 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen 2 protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen-2 (Fragment) OS=Mus musculus OX=10090 GN=Nid2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen-2 OS=Mus musculus OX=10090 GN=NID-2 PE=4 SV=1; Nidogen-2 OS=Mus musculus OX=10090 GN=Nid2 PE=1 SV=2 0 2 2 0.6637 0 1 1 1 627.33118 1253.65508 1253.65348 1.28 0.0008 0/0 0 0 12152359 HCD 30 MS2 25.37712 536.9 110 37.423 8679 8679 8672 QEplus033719.raw F4 539.4 491.9 700.1 504.5 460.1 525.6 219 3.36 1 FALSE 1.14E-05 1.18E-07 1.414 -250 27730 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QFSSASSQQR [K].qFSSASSQQR.[Q] N-Term(TMT6plex) 5 A4FUS0 Eif2b3 protein OS=Mus musculus OX=10090 GN=Eif2b3 PE=2 SV=1 A4FUS0; B1AUN2; Q3UKV0; B1AUN3; A0AUM9 "Eif2b3 protein OS=Mus musculus OX=10090 GN=Eif2b3 PE=2 SV=1; Eukaryotic translation initiation factor 2B, subunit 3 OS=Mus musculus OX=10090 GN=Eif2b3 PE=1 SV=1; Eukaryotic translation initiation factor 2B, subunit 3 OS=Mus musculus OX=10090 GN=Eif2b3 PE=1 SV=1; Eukaryotic translation initiation factor 2B, subunit 3 OS=Mus musculus OX=10090 GN=Eif2b3 PE=1 SV=1; Eif2b3 protein OS=Mus musculus OX=10090 GN=Eif2b3 PE=2 SV=2" 0 2 2 0.7466 0 1 1 1 677.8504 1354.69353 1354.69126 1.68 0.00114 0/0 0 0 7742078.5 HCD 30 MS2 0 300.2 110 37.428 8681 8681 8672 QEplus033719.raw F4 317.5 249.7 342.2 254.5 297.7 339.5 207 3.71 1 FALSE 1.14E-05 2.45E-07 1.353 -250 27743 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSDEVYR [K].qSDEVYR.[R] N-Term(TMT6plex) 2 E9QJV4 Pre-mRNA-processing factor 39 OS=Mus musculus OX=10090 GN=Prpf39 PE=1 SV=1 E9QJV4; Q8K2Z2 Pre-mRNA-processing factor 39 OS=Mus musculus OX=10090 GN=Prpf39 PE=1 SV=1; Pre-mRNA-processing factor 39 OS=Mus musculus OX=10090 GN=Prpf39 PE=1 SV=3 0 2 2 0.4128 0 1 1 1 563.2901 1125.57292 1125.57377 -0.75 -0.00042 0/0 0 0 1224439.625 HCD 30 MS2 50.48891 311.1 110 37.4379 8684 8684 8683 QEplus033719.raw F4 318.8 231.6 335.9 301.1 326.3 352.8 83 1.72 1 FALSE 0.001284 0.01744 0.305 -250 27750 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDQCDYACR [K].cDQcDYAcR.[Q] N-Term(TMT6plex); C1(Carbamidomethyl); C4(Carbamidomethyl); C8(Carbamidomethyl) 3 Q3UYZ8 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ctcf PE=2 SV=1 Q3UYZ8; Q3USR8; Q61164 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ctcf PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ctcf PE=2 SV=1; Transcriptional repressor CTCF OS=Mus musculus OX=10090 GN=Ctcf PE=1 SV=2 0 2 2 1 0 1 1 1 738.79828 1476.58928 1476.58674 1.72 0.00127 0/0 0 0 2478372 HCD 30 MS2 0 119.9 110 37.4404 8685 8685 8683 QEplus033719.raw F4 116.2 129.3 130.8 94.2 145.9 103.1 1 3.27 1 FALSE 0.0005556 0.008493 0.43 -250 27757 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DANSSVMR [R].dANSSVMR.[F] N-Term(TMT6plex) 5 Q6P2B1 Transportin-3 OS=Mus musculus OX=10090 GN=Tnpo3 PE=1 SV=1 F6TDZ2; Q6P2B1; Q571K5; Q6P2B1-2; Q6DI95 Transportin-3 (Fragment) OS=Mus musculus OX=10090 GN=Tnpo3 PE=1 SV=1; Transportin-3 OS=Mus musculus OX=10090 GN=Tnpo3 PE=1 SV=1; MKIAA4133 protein (Fragment) OS=Mus musculus OX=10090 GN=Tnpo3 PE=2 SV=1; Isoform 2 of Transportin-3 OS=Mus musculus OX=10090 GN=Tnpo3; Transportin 3 OS=Mus musculus OX=10090 GN=Tnpo3 PE=2 SV=1 0 2 2 0.4801 0 1 1 1 554.78552 1108.56377 1108.56182 1.75 0.00097 0/0 0 0 16286065 HCD 30 MS2 3.230049 695.2 110 37.4451 8687 8687 8683 QEplus033719.raw F4 697.5 641.9 741.4 540.7 864.2 685.3 134 2.77 1 FALSE 0.0005076 0.007941 0.44 -250 27774 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AANFENHSGR [R].aANFENHSGR.[L] N-Term(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 2 2 0.7443 0 1 1 1 666.3371 1331.66692 1331.66538 1.16 0.00077 0/0 0 0 14742694 HCD 30 MS2 5.866946 466.1 110 37.4499 8689 8689 8683 QEplus033719.raw F4 440.3 417.3 551.2 363.2 540.5 484 129 3.52 1 FALSE 1.14E-05 1.12E-05 1.038 -250 27781 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EREENVK [K].eREENVk.[A] N-Term(TMT6plex); K7(TMT6plex) 4 Q6ZQ73; Q6ZQ38 Cullin-associated NEDD8-dissociated protein 2 OS=Mus musculus OX=10090 GN=Cand2 PE=1 SV=2;Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2 Q6ZQ73; Q3UMI9; Q6ZQ38; Q3UM57 Cullin-associated NEDD8-dissociated protein 2 OS=Mus musculus OX=10090 GN=Cand2 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cand1 PE=2 SV=1; Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2; TIP120 domain-containing protein OS=Mus musculus OX=10090 GN=Cand2 PE=2 SV=1 1 3 3 0.385 0 1 1 1 454.59833 1361.78043 1361.7789 1.12 0.00051 0/0 0 0 9063776 HCD 30 MS2 29.82403 566.6 110 37.4524 8690 8690 8683 QEplus033719.raw F4 1199.1 314.8 549.2 385 400.5 551 495 2 2 FALSE 0.001607 0.02582 0.239 -250 27786 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDGSTNAQSR [R].lDGSTNAQSR.[K] N-Term(TMT6plex) 3 Q61687 Transcriptional regulator ATRX OS=Mus musculus OX=10090 GN=Atrx PE=1 SV=3 Q61687; Q3TSV4; Q3UZ76 Transcriptional regulator ATRX OS=Mus musculus OX=10090 GN=Atrx PE=1 SV=3; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Atrx PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Atrx PE=2 SV=1 0 2 2 0.6553 0 1 1 1 639.3363 1277.66533 1277.66471 0.49 0.00031 0/0 0 0 5070502.5 HCD 30 MS2 0 241 110 37.4549 8691 8691 8683 QEplus033719.raw F4 241 240.9 247.8 181.3 310.1 224.7 251 2.64 1 FALSE 1.14E-05 5.93E-07 1.28 -250 27802 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNTVNTMR [K].nNTVNTMR.[L] N-Term(TMT6plex) 5 Q3UYH9 "Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1" Q3UYH9; Q3V3U0; Q3TFQ8; Q3UGT5; Q8CI94 "Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Glycogen phosphorylase, brain form OS=Mus musculus OX=10090 GN=Pygb PE=1 SV=3" 0 2 2 0.6408 0 1 1 1 589.81116 1178.61504 1178.61492 0.1 0.00006 0/0 0 0 25077002 HCD 30 MS2 29.51988 552 52.856 37.4595 8693 8693 8683 QEplus033719.raw F4 546.5 515.2 551.8 449.5 682 566.8 209 2.84 1 FALSE 1.14E-05 0.0002171 0.793 -250 27816 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQEAEVGESR [R].aQEAEVGESR.[V] N-Term(TMT6plex) 2 E9QP49; Q99MS7 EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1;EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1 E9QP49; Q99MS7 EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1; EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1 0 2 2 0.073 0 1 1 1 652.83563 1304.66399 1304.66437 -0.3 -0.00019 0/0 0 0 20588832 HCD 30 MS2 12.34681 538.5 110 37.4693 8696 8696 8694 QEplus033719.raw F4 622.1 366.1 520.7 534 546.1 642.3 163 3.15 2 FALSE 1.14E-05 1.71E-05 1.003 -250 27822 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVEAPR [R].gVEAPR.[A] N-Term(TMT6plex) 1 Q9ER38 Torsin-3A OS=Mus musculus OX=10090 GN=Tor3a PE=1 SV=2 Q9ER38 Torsin-3A OS=Mus musculus OX=10090 GN=Tor3a PE=1 SV=2 0 2 2 0.1923 0 1 1 1 429.25632 857.50536 857.50423 1.31 0.00056 0/0 0 0 41609840 HCD 30 MS2 20.71377 533 33.027 37.4761 8699 8699 8694 QEplus033719.raw F4 647.9 386.3 526.3 556.7 544.7 535.8 79 1.82 1 FALSE 0.004296 0.07871 0.065 -250 27829 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTSGLER [R].dTSGLER.[S] N-Term(TMT6plex) 2 Q3TUQ5 Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=1 Q3TUQ5; O35691 Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=1; Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=4 0 2 2 0.3806 0 1 1 1 503.772 1006.53673 1006.53665 0.07 0.00004 0/0 0 0 33460624 HCD 30 MS2 19.52746 633.2 41.107 37.4783 8700 8700 8694 QEplus033719.raw F4 630 562.7 689.1 517.9 749.8 649.8 156 2.68 1 FALSE 0.0002719 0.005497 0.49 -250 27835 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHAALEPR [R].eHAALEPR.[H] N-Term(TMT6plex) 1 Q99KI0 "Aconitate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Aco2 PE=1 SV=1" Q99KI0 "Aconitate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Aco2 PE=1 SV=1" 0 2 2 0.3893 0 1 1 1 576.323 1151.63872 1151.63704 1.46 0.00084 0/0 0 0 26127218 HCD 30 MS2 22.64398 646.1 74.553 37.4806 8701 8701 8694 QEplus033719.raw F4 701.6 477.1 680.9 693.4 581.5 741.9 277 2.62 1 FALSE 0.001074 0.01377 0.348 -250 27841 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESCDSALR [R].eScDSALR.[A] N-Term(TMT6plex); C3(Carbamidomethyl) 5 P47753 F-actin-capping protein subunit alpha-1 OS=Mus musculus OX=10090 GN=Capza1 PE=1 SV=4 P47753; Q5RKN9; Q3UJV2; Q3TLJ0; Q3UAS2 F-actin-capping protein subunit alpha-1 OS=Mus musculus OX=10090 GN=Capza1 PE=1 SV=4; F-actin-capping protein subunit alpha OS=Mus musculus OX=10090 GN=Capza1 PE=1 SV=1; F-actin-capping protein subunit alpha OS=Mus musculus OX=10090 GN=Capza1 PE=2 SV=1; F-actin-capping protein subunit alpha OS=Mus musculus OX=10090 GN=Capza1 PE=2 SV=1; F-actin-capping protein subunit alpha OS=Mus musculus OX=10090 GN=Capza1 PE=2 SV=1 0 2 2 0.4861 0 1 1 1 583.7879 1166.56853 1166.5673 1.05 0.00061 0/0 0 0 20487014 HCD 30 MS2 45.54279 554.8 34.497 37.4829 8702 8702 8694 QEplus033719.raw F4 565.6 502.6 617.6 411 724.1 508 97 2.51 1 FALSE 0.001266 0.01729 0.307 -250 27857 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLEEEQR [K].sLEEEQR.[A] N-Term(TMT6plex) 8 A0A0R4J0X8 Rho guanine nucleotide exchange factor 7 OS=Mus musculus OX=10090 GN=Arhgef7 PE=1 SV=1 Q9ES28; Q9ES28-7; D3Z0V2; Q9ES28-3; Q9ES28-4; Q9ES28-8; Q9ES28-2; A0A0R4J0X8 Rho guanine nucleotide exchange factor 7 OS=Mus musculus OX=10090 GN=Arhgef7 PE=1 SV=2; Isoform G of Rho guanine nucleotide exchange factor 7 OS=Mus musculus OX=10090 GN=Arhgef7; Rho guanine nucleotide exchange factor 7 (Fragment) OS=Mus musculus OX=10090 GN=Arhgef7 PE=1 SV=2; Isoform C of Rho guanine nucleotide exchange factor 7 OS=Mus musculus OX=10090 GN=Arhgef7; Isoform D of Rho guanine nucleotide exchange factor 7 OS=Mus musculus OX=10090 GN=Arhgef7; Isoform H of Rho guanine nucleotide exchange factor 7 OS=Mus musculus OX=10090 GN=Arhgef7; Isoform A of Rho guanine nucleotide exchange factor 7 OS=Mus musculus OX=10090 GN=Arhgef7; Rho guanine nucleotide exchange factor 7 OS=Mus musculus OX=10090 GN=Arhgef7 PE=1 SV=1 0 2 2 0.0406 0 1 1 1 560.29663 1119.58599 1119.58433 1.48 0.00083 0/0 0 0 10012613 HCD 30 MS2 21.19021 528.8 110 37.4876 8704 8704 8694 QEplus033719.raw F4 560.7 388.3 556.8 461.9 548.1 656.8 217 2.71 1 FALSE 0.001343 0.01891 0.291 -250 27865 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETTENIR [R].eTTENIR.[V] N-Term(TMT6plex) 2 Q91VA6 Polymerase delta-interacting protein 2 OS=Mus musculus OX=10090 GN=Poldip2 PE=1 SV=1 F6SQH7; Q91VA6 Polymerase delta-interacting protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Poldip2 PE=1 SV=1; Polymerase delta-interacting protein 2 OS=Mus musculus OX=10090 GN=Poldip2 PE=1 SV=1 0 2 2 0.3407 0 1 1 1 546.30109 1091.5949 1091.58942 5.02 0.00274 0/0 0 0 3598638 HCD 30 MS2 85.99199 700.9 110 37.4949 8706 8706 8705 QEplus033719.raw F4 696.9 561 716.4 591.2 843.4 796.2 236 1.82 1 FALSE 0.002628 0.05181 0.137 -250 27870 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQEEERER [K].lQEEERER.[R] N-Term(TMT6plex) 3 Q8BT90 40S ribosomal protein S17 (Fragment) OS=Mus musculus OX=10090 GN=Rps17 PE=2 SV=1 Q8BT90; Q5M9L7; Q3TK12 40S ribosomal protein S17 (Fragment) OS=Mus musculus OX=10090 GN=Rps17 PE=2 SV=1; 40S ribosomal protein S17 OS=Mus musculus OX=10090 GN=Rps17 PE=1 SV=1; 40S ribosomal protein S17 OS=Mus musculus OX=10090 GN=Rps17 PE=2 SV=1 1 3 3 0.4203 0 1 1 1 439.90414 1317.69788 1317.69601 1.42 0.00062 0/0 0 0 197062832 HCD 30 MS2 8.509013 417.3 7.125 37.4994 8708 8708 8705 QEplus033719.raw F4 401.8 352.7 434.2 358.5 494.2 462.6 260 3.64 1 FALSE 3.35E-05 0.0012 0.646 -250 27875 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNPVVR [K].sNPVVR.[T] N-Term(TMT6plex) 4 Q9DCN2 NADH-cytochrome b5 reductase 3 OS=Mus musculus OX=10090 GN=Cyb5r3 PE=1 SV=3 Q9DCN2-2; Q9DCN2; Q9CY59; F2Z456 Isoform 2 of NADH-cytochrome b5 reductase 3 OS=Mus musculus OX=10090 GN=Cyb5r3; NADH-cytochrome b5 reductase 3 OS=Mus musculus OX=10090 GN=Cyb5r3 PE=1 SV=3; NADH-cytochrome b5 reductase OS=Mus musculus OX=10090 GN=Cyb5r3 PE=2 SV=1; NADH-cytochrome b5 reductase OS=Mus musculus OX=10090 GN=Cyb5r3 PE=1 SV=1 0 2 2 0.3302 0 1 1 1 450.77704 900.5468 900.54643 0.41 0.00018 0/0 0 0 99414352 HCD 30 MS2 8.010448 563 13.337 37.5017 8709 8709 8705 QEplus033719.raw F4 632.9 349.4 521 702.8 552 619.7 89 2.15 1 FALSE 0.00736 0.1181 -0.038 -250 27880 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPLGTQQNPAR [K].rPLGTQQNPAR.[T] N-Term(TMT6plex) 4 B1AWB9; O88207-2 "Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1;Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1" A3KGE7; B1AWB9; O88207-2; A0A5F8MQ70 "Collagen alpha-1(V) chain (Fragment) OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1; Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1; Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1; Collagen alpha-1(V) chain (Fragment) OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1" 0 3 3 0.7166 0 1 1 1 489.61789 1466.83911 1466.83892 0.13 0.00006 0/0 0 0 48452504 HCD 30 MS2 36.2702 489.5 32.62 37.504 8710 8710 8705 QEplus033719.raw F4 487.9 412.9 530.1 386.8 595.8 523.4 392 4.87 2 FALSE 1.14E-05 8.49E-09 1.631 -250 27887 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STPSGPVR [R].sTPSGPVR.[S] N-Term(TMT6plex) 2 Q91VM5 "RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" A0A2I3BRL8; Q91VM5 "Predicted gene 7324 OS=Mus musculus OX=10090 GN=Gm7324 PE=4 SV=1; RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" 0 2 2 0.6489 0 1 1 1 515.29858 1029.58989 1029.58902 0.84 0.00043 0/0 0 0 42242936 HCD 30 MS2 31.69598 522.7 29.301 37.5062 8711 8711 8705 QEplus033719.raw F4 526.6 565.1 572.9 438 556.5 477.2 190 2.82 1 FALSE 0.002071 0.03851 0.18 -250 27899 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YYGGGNEGGR [R].yYGGGNEGGR.[A] N-Term(TMT6plex) 4 G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 Q8R081; Q8BI42; Q3UMT7; G5E924 Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 0 2 2 0.8105 0 1 1 1 629.80475 1258.60222 1258.60138 0.67 0.00042 0/0 0 0 37845732 HCD 30 MS2 6.002544 699.4 38.49 37.5108 8713 8713 8705 QEplus033719.raw F4 648.8 796.1 831.2 515.4 794 610.9 47 3.06 1 FALSE 1.14E-05 7.92E-06 1.067 -250 27912 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFVESR [K].rFVESR.[D] N-Term(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 1 2 2 0.25 0 1 1 1 511.80164 1022.59599 1022.59444 1.52 0.00078 0/0 0 0 9719514 HCD 30 MS2 26.99476 424.1 110 37.5226 8717 8717 8716 QEplus033719.raw F4 452 246.1 395.4 514.7 395.5 540.7 141 1.88 2 FALSE 0.009941 0.1958 -0.13 -250 27916 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSALCDR [R].sSALcDR.[H] N-Term(TMT6plex); C5(Carbamidomethyl) 2 F6RV17 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Mus musculus OX=10090 GN=Ppp2r2d PE=1 SV=2 F6RV17; Q925E7 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Mus musculus OX=10090 GN=Ppp2r2d PE=1 SV=2; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Mus musculus OX=10090 GN=Ppp2r2d PE=1 SV=1 0 2 2 0.4669 0 1 1 1 519.26587 1037.52446 1037.52471 -0.24 -0.00012 0/0 0 0 6614135 HCD 30 MS2 21.24052 617.2 110 37.525 8718 8718 8716 QEplus033719.raw F4 634.3 489.9 612.8 493.3 805.5 667.3 88 2.42 1 FALSE 0.001632 0.02664 0.234 -250 27933 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGGSTETGR [R].iGGSTETGR.[H] N-Term(TMT6plex) 11 Q3TUR1 Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1 Q3TUR1; Q3UA28; Q3TG02; Q3U573; Q8BWT4; Q3U9H4; Q5U412; Q3U547; Q8BMP9; A0A1S6GWK0; Q3TVN9 Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1 0 2 2 0.5894 0 1 1 1 553.8045 1106.60173 1106.60032 1.28 0.00071 0/0 0 0 17396190 HCD 30 MS2 22.63475 874.2 110 37.532 8721 8721 8716 QEplus033719.raw F4 854.4 788.8 894.1 743.5 1122.7 841.6 265 3.02 1 FALSE 1.14E-05 3.34E-06 1.138 -250 27949 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MFGGSGTSSRPSSNR [R].mFGGSGTSSRPSSNR.[S] N-Term(TMT6plex); M1(Oxidation) 8 Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; A2AKJ2; Q3U6S1; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 3 3 0.6869 0 1 1 1 591.62335 1772.8555 1772.85471 0.45 0.00026 0/0 0 0 11074218 HCD 30 MS2 10.47845 405.9 110 37.537 8723 8723 8716 QEplus033719.raw F4 426.2 421.6 464.4 292.1 488.4 342.7 97 2.97 1 FALSE 0.0008183 0.0112 0.385 -250 27953 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVSTPANQR [K].eVSTPANQR.[R] N-Term(TMT6plex) 4 Q60847 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3 Q60847; E9PX70; Q60847-5; Q60847-2 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3; Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1; Isoform 5 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 2 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 0 2 2 0.5442 0 1 1 1 615.83569 1230.66411 1230.66398 0.11 0.00006 0/0 0 0 5840896.5 HCD 30 MS2 0 275.3 110 37.5395 8724 8724 8716 QEplus033719.raw F4 277.7 237.1 222.4 130.2 589.3 194.8 304 2.94 1 FALSE 1.14E-05 2.88E-06 1.15 -250 27958 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPLGTQQNPAR [K].rPLGTQQNPAR.[T] N-Term(TMT6plex) 4 B1AWB9; O88207-2 "Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1;Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1" A3KGE7; B1AWB9; O88207-2; A0A5F8MQ70 "Collagen alpha-1(V) chain (Fragment) OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1; Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1; Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1; Collagen alpha-1(V) chain (Fragment) OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1" 0 2 2 0.5365 0 1 1 1 733.92322 1466.83916 1466.83892 0.16 0.00012 0/0 0 0 4591607 HCD 30 MS2 0 67.1 110 37.5421 8725 8725 8716 QEplus033719.raw F4 65.6 54.6 68.6 55.2 80.6 77.9 392 3.15 2 FALSE 1.14E-05 4.66E-05 0.92 -250 27964 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVQDESQRK [R].qVQDESQRk.[R] N-Term(TMT6plex); K9(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.5736 0 1 1 1 525.96716 1575.88694 1575.88549 0.92 0.00048 0/0 0 0 3014960.75 HCD 30 MS2 31.99849 504.1 110 37.5446 8726 8726 8716 QEplus033719.raw F4 755 327.4 533.1 504.7 442.3 462.4 465 3.87 2 FALSE 1.14E-05 1.39E-06 1.21 -250 27974 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMPQEER [R].gMPQEER.[L] N-Term(TMT6plex) 2 Q9Z1N5 Spliceosome RNA helicase Ddx39b OS=Mus musculus OX=10090 GN=Ddx39b PE=1 SV=1 Q9Z1N5; A0A1S6GWH2 Spliceosome RNA helicase Ddx39b OS=Mus musculus OX=10090 GN=Ddx39b PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39b PE=2 SV=1 0 2 2 0.5805 0 1 1 1 538.2746 1075.54192 1075.54036 1.45 0.00078 0/0 0 0 144899440 HCD 30 MS2 9.604921 599.6 9.469 37.5589 8731 8731 8727 QEplus033719.raw F4 588 549.8 658.7 444.7 712.6 643.7 94 2.36 1 FALSE 0.001456 0.02104 0.272 -250 27984 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDAANNYAR [K].eDAANNYAR.[G] N-Term(TMT6plex) 12 P68369; Q52L87; A0A0A0MQA5 Tubulin alpha-1A chain OS=Mus musculus OX=10090 GN=Tuba1a PE=1 SV=1;Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=1 SV=1;Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1 A0A087WRB4; Q5FW91; Q3TIZ0; Q9JJZ2; A0A2R8VHF3; P68369; P05213; A0A087WQS4; Q52L87; A0A0A0MQA5; O89052; P68368 Tubulin alpha-4A chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba3a PE=1 SV=1; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=2 SV=1; Tubulin alpha-8 chain OS=Mus musculus OX=10090 GN=Tuba8 PE=1 SV=1; Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Gm49450 PE=3 SV=1; Tubulin alpha-1A chain OS=Mus musculus OX=10090 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Mus musculus OX=10090 GN=Tuba1b PE=1 SV=2; Tubulin alpha-4A chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=1 SV=1; Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1; Alpha-tubulin (Fragment) OS=Mus musculus OX=10090 GN=Tuba1b PE=2 SV=1; Tubulin alpha-4A chain OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1 0 2 2 0.5105 0 1 1 1 626.81018 1252.61308 1252.61194 0.91 0.00057 0/0 0 0 90499896 HCD 30 MS2 54.5206 614.9 18.693 37.5634 8733 8733 8727 QEplus033719.raw F4 657.4 543.6 711 533.2 663.8 580.4 113 3.33 3 FALSE 1.14E-05 5.02E-06 1.104 -250 28001 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQEEERER [K].lQEEERER.[R] N-Term(TMT6plex) 3 Q8BT90 40S ribosomal protein S17 (Fragment) OS=Mus musculus OX=10090 GN=Rps17 PE=2 SV=1 Q8BT90; Q5M9L7; Q3TK12 40S ribosomal protein S17 (Fragment) OS=Mus musculus OX=10090 GN=Rps17 PE=2 SV=1; 40S ribosomal protein S17 OS=Mus musculus OX=10090 GN=Rps17 PE=1 SV=1; 40S ribosomal protein S17 OS=Mus musculus OX=10090 GN=Rps17 PE=2 SV=1 1 2 2 0.3973 0 1 1 1 659.35266 1317.69805 1317.69601 1.55 0.00102 0/0 0 0 46932256 HCD 30 MS2 15.29407 332.5 47.706 37.5679 8735 8735 8727 QEplus033719.raw F4 329.1 298.7 352.6 269.5 377.2 368 251 2.97 1 FALSE 1.14E-05 0.000541 0.715 -250 28006 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADPSQDVR [R].aDPSQDVR.[V] N-Term(TMT6plex) 3 Q04857 Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 Q99LW4; Q04857; B0LAD9 Col6a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col6a1 PE=2 SV=1; Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1; Procollagen type VI alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Col6a1 PE=2 SV=1 0 2 2 0.4784 0 1 1 1 558.79596 1116.58464 1116.58467 -0.02 -0.00001 0/0 0 0 26604128 HCD 30 MS2 21.82523 530.2 47.236 37.5725 8737 8737 8727 QEplus033719.raw F4 519.9 521.4 561.1 377.4 687.9 513.2 109 2.55 1 FALSE 2.26E-05 0.0009724 0.665 -250 28028 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQIASEQSSR [R].eQIASEQSSR.[L] N-Term(TMT6plex) 3 Q3ULN6 Sacchrp_dh_NADP domain-containing protein OS=Mus musculus OX=10090 GN=Sccpdh PE=2 SV=1 Q3ULN6; J3QNN5; Q8R127 Sacchrp_dh_NADP domain-containing protein OS=Mus musculus OX=10090 GN=Sccpdh PE=2 SV=1; Saccharopine dehydrogenase-like oxidoreductase OS=Mus musculus OX=10090 GN=Sccpdh PE=1 SV=1; Saccharopine dehydrogenase-like oxidoreductase OS=Mus musculus OX=10090 GN=Sccpdh PE=1 SV=1 0 2 2 0.4637 0 1 1 1 682.35486 1363.70244 1363.70149 0.7 0.00048 0/0 0 0 16960058 HCD 30 MS2 14.58742 388.5 96.986 37.5888 8743 8743 8738 QEplus033719.raw F4 436.3 224.2 368.3 532.5 249.5 520.3 205 3.58 1 FALSE 1.14E-05 3.14E-07 1.333 -250 28032 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMGPPVGGHR [R].rMGPPVGGHR.[R] N-Term(TMT6plex) 4 G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 Q8R081; G3UY38; Q3UMT7; G5E924 Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 1 3 3 0.7183 0 1 1 1 431.57898 1292.72239 1292.72072 1.28 0.00055 0/0 0 0 12335668 HCD 30 MS2 13.88838 429.9 110 37.5913 8744 8744 8738 QEplus033719.raw F4 518.7 336.8 473.4 334.9 478 437.6 349 4.65 1 FALSE 1.14E-05 0.0001145 0.846 -250 28036 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGDAPAAGEDA [K].gGDAPAAGEDA.[-] N-Term(TMT6plex) 2 P62852 40S ribosomal protein S25 OS=Mus musculus OX=10090 GN=Rps25 PE=1 SV=1 A0A1L1SQA8; P62852 40S ribosomal protein S25 OS=Mus musculus OX=10090 GN=Rps25 PE=1 SV=1; 40S ribosomal protein S25 OS=Mus musculus OX=10090 GN=Rps25 PE=1 SV=1 0 2 2 0.8591 0 1 1 1 580.27563 1159.54399 1159.54286 0.98 0.00057 0/0 0 0 11210912 HCD 30 MS2 13.40478 423 110 37.5938 8745 8745 8738 QEplus033719.raw F4 462.9 337.4 446.8 437.1 371.9 481.7 23 2.91 1 FALSE 1.14E-05 0.0001042 0.854 -250 28041 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYDRGYDSR [R].dYDRGYDSR.[I] N-Term(TMT6plex) 8 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 2 2 0.6513 0 1 1 1 688.32654 1375.6458 1375.64397 1.33 0.00091 0/0 0 0 3871228.75 HCD 30 MS2 36.40611 113.8 110 37.5963 8746 8746 8738 QEplus033719.raw F4 117.8 101.6 113.4 75.7 182.7 91.4 33 2.38 1 FALSE 0.0004888 0.00779 0.443 -250 28058 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IASEASR [R].iASEASR.[L] N-Term(TMT6plex) 12 Q64475 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3 Q64475; Q8CGP2; Q8CGP1; A0JNS9; P70696; Q9D2U9; Q8CGP2-2; Q8CBB6; Q8CGP0; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Histone H2B type 3-A OS=Mus musculus OX=10090 GN=Hist3h2ba PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 3-B OS=Mus musculus OX=10090 GN=H2bu1 PE=1 SV=3; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 0 2 2 0.3603 0 1 1 1 481.77719 962.54711 962.54683 0.29 0.00014 0/0 0 0 81440624 HCD 30 MS2 11.94676 510.8 14.988 37.6087 8750 8750 8749 QEplus033719.raw F4 559.3 521.4 566.8 349.7 697.7 369.9 127 2.72 1 FALSE 0.0006383 0.009789 0.408 -250 28066 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAAGSADR [K].iAAGSADR.[F] N-Term(TMT6plex) 1 Q6PE01 U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus OX=10090 GN=Snrnp40 PE=1 SV=1 Q6PE01 U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus OX=10090 GN=Snrnp40 PE=1 SV=1 0 2 2 0.2614 0 1 1 1 495.28308 989.55889 989.55772 1.17 0.00058 0/0 0 0 44864756 HCD 30 MS2 28.66706 546.3 22.502 37.6109 8751 8751 8749 QEplus033719.raw F4 561.6 497.2 557.1 454.4 716.8 490.8 215 2.41 1 FALSE 5.44E-05 0.002318 0.584 -250 28075 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EECPAVR [K].eEcPAVR.[L] N-Term(TMT6plex); C3(Carbamidomethyl) 13 P09103 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2 P09103; Q3URP6; Q3TWE3; Q3U738; Q3TT76; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; Q3UA23; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 0 2 2 0.5415 0 1 1 1 545.28192 1089.55657 1089.55601 0.51 0.00028 0/0 0 0 189752048 HCD 30 MS2 36.83482 587.8 6.29 37.6132 8752 8752 8749 QEplus033719.raw F4 597.5 492.1 627.4 487.4 726.5 595.6 104 2.05 1 FALSE 0.004254 0.07831 0.066 -250 28082 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTAQEVDTYRR [R].rTAQEVDTYRR.[S] N-Term(TMT6plex) 10 Q5U222 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1 B1ARC0; Q3UXW3; Q5U222; Q3V0Z8; B1ARB9; O35662; A1L333; S4R1I6; Q61656; Q8BTS0 RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=8; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=8; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Hlr1 PE=4 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 2 4 4 0.6509 0 1 1 1 406.72516 1623.8788 1623.87643 1.46 0.00059 0/0 0 0 42848736 HCD 30 MS2 11.48443 227.2 44.885 37.6154 8753 8753 8749 QEplus033719.raw F4 243.1 217.1 264.5 168.8 257.6 212.3 395 4.64 1 FALSE 1.14E-05 3.74E-10 1.888 -250 28087 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SASADLSR [K].sASADLSR.[S] N-Term(TMT6plex) 10 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; A0A0G2JFT4; A0A0G2JG35; A0A140T8T5; P27546-3; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 2 2 0.2056 0 1 1 1 518.2854 1035.56352 1035.5632 0.31 0.00016 0/0 0 0 27860036 HCD 30 MS2 8.863231 658.2 34.046 37.6177 8754 8754 8749 QEplus033719.raw F4 682.1 528.7 676.5 559.6 844.7 657.5 207 2.48 2 FALSE 1.14E-05 0.0003869 0.744 -250 28095 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAALAQGR [K].qAALAQGR.[A] N-Term(TMT6plex) 1 Q6P9Q4 FH1/FH2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Fhod1 PE=1 SV=3 Q6P9Q4 FH1/FH2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Fhod1 PE=1 SV=3 0 2 2 0.1345 0 1 1 1 522.31256 1043.61785 1043.61591 1.86 0.00097 0/0 0 0 15521948 HCD 30 MS2 28.93334 804.5 110 37.6224 8756 8756 8749 QEplus033719.raw F4 897.6 748.6 820.9 494.7 1168.6 696.7 265 2.75 1 FALSE 1.14E-05 0.0003963 0.742 -250 28110 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQGFGSR [K].eQGFGSR.[Q] N-Term(TMT6plex) 1 Q6ZQH8 Nucleoporin NUP188 OS=Mus musculus OX=10090 GN=Nup188 PE=1 SV=2 Q6ZQH8 Nucleoporin NUP188 OS=Mus musculus OX=10090 GN=Nup188 PE=1 SV=2 0 2 2 0.2265 0 1 1 1 505.26663 1009.52599 1009.52642 -0.43 -0.00022 0/0 0 0 7972122 HCD 30 MS2 34.83921 860.9 110 37.6275 8758 8758 8749 QEplus033719.raw F4 944.7 487.2 802.5 1120.4 691.9 1118.9 100 1.81 1 FALSE 0.00171 0.02847 0.224 -250 28122 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARVEVER [K].aRVEVER.[D] N-Term(TMT6plex) 9 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 1 3 3 0.2655 0 1 1 1 363.21912 1087.6428 1087.64212 0.62 0.00022 0/0 0 0 54991212 HCD 30 MS2 17.39985 317.8 19.843 37.6373 8761 8761 8760 QEplus033719.raw F4 250.2 274.9 327.4 200 561.6 292.6 257 2.75 2 FALSE 0.0015 0.02163 0.268 -250 28131 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SACGVCPGR [K].sAcGVcPGR.[L] N-Term(TMT6plex); C3(Carbamidomethyl); C6(Carbamidomethyl) 3 Q9D1R9 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=2 A0A0G2JGY8; Q9D1R9; A0A0G2JEY6 60S ribosomal protein L34 (Fragment) OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=4; 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=2; 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=1 0 2 2 0.4857 0 1 1 1 596.79285 1192.57842 1192.57643 1.67 0.00099 0/0 0 0 2359833.75 HCD 30 MS2 34.72018 266.7 110 37.6398 8762 8762 8760 QEplus033719.raw F4 279.4 193.5 286.7 220.7 285.9 333.9 70 2.45 1 FALSE 1.14E-05 0.0008004 0.682 -250 28140 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTAQEVDTYRR [R].rTAQEVDTYRR.[S] N-Term(TMT6plex) 10 Q5U222 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1 B1ARC0; Q3UXW3; Q5U222; Q3V0Z8; B1ARB9; O35662; A1L333; S4R1I6; Q61656; Q8BTS0 RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=8; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=8; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Hlr1 PE=4 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 2 3 3 0.5357 0 1 1 1 541.96472 1623.87961 1623.87643 1.96 0.00106 0/0 0 0 24114996 HCD 30 MS2 19.982 410.5 84.796 37.6488 8766 8766 8760 QEplus033719.raw F4 456.5 365.3 436.1 295.1 566.3 343.5 392 4.48 1 FALSE 1.14E-05 8.50E-10 1.82 -250 28158 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAPSGPVR [R].sAPSGPVR.[S] N-Term(TMT6plex) 4 Q9WV02 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1" A2AFI3; Q9WV02-2; Q9WV02; S4R1F6 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; Isoform 2 of RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1" 0 2 2 0.5498 0 1 1 1 500.29303 999.57878 999.57846 0.32 0.00016 0/0 0 0 17059386 HCD 30 MS2 55.46539 842.1 93.459 37.6533 8768 8768 8760 QEplus033719.raw F4 856 791.8 875.7 725.2 952.4 851.7 94 2.51 1 FALSE 3.35E-05 0.001159 0.649 -250 28168 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDAANNYAR [K].eDAANNYAR.[G] N-Term(TMT6plex) 12 P68369; Q52L87; A0A0A0MQA5 Tubulin alpha-1A chain OS=Mus musculus OX=10090 GN=Tuba1a PE=1 SV=1;Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=1 SV=1;Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1 A0A087WRB4; Q5FW91; Q3TIZ0; Q9JJZ2; A0A2R8VHF3; P68369; P05213; A0A087WQS4; Q52L87; A0A0A0MQA5; O89052; P68368 Tubulin alpha-4A chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba3a PE=1 SV=1; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=2 SV=1; Tubulin alpha-8 chain OS=Mus musculus OX=10090 GN=Tuba8 PE=1 SV=1; Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Gm49450 PE=3 SV=1; Tubulin alpha-1A chain OS=Mus musculus OX=10090 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Mus musculus OX=10090 GN=Tuba1b PE=1 SV=2; Tubulin alpha-4A chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=1 SV=1; Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1; Alpha-tubulin (Fragment) OS=Mus musculus OX=10090 GN=Tuba1b PE=2 SV=1; Tubulin alpha-4A chain OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1 0 3 3 0.649 0 1 1 1 418.20886 1252.61203 1252.61194 0.07 0.00003 0/0 0 0 8671703 HCD 30 MS2 43.34013 355 110 37.6583 8770 8770 8760 QEplus033719.raw F4 391 252.8 360.7 302.6 435.1 387.9 116 3.39 3 FALSE 5.44E-05 0.001921 0.602 -250 28173 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ACCTLR [R].accTLR.[L] N-Term(TMT6plex); C2(Carbamidomethyl); C3(Carbamidomethyl) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.3613 0 1 1 1 505.25867 1009.51006 1009.51204 -1.96 -0.00099 0/0 0 0 16027300 HCD 30 MS2 17.58627 873.3 91.854 37.6656 8772 8772 8771 QEplus033719.raw F4 902.4 404.8 748.6 1348.7 564.7 1270.8 118 1.91 2 FALSE 0.007528 0.1231 -0.048 -250 28179 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADGTATAPPPR [K].aDGTATAPPPR.[S] N-Term(TMT6plex) 11 Q4JG03 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1 F6XP90; Q7TMY8-4; Q4JG03; Q3TNP1; Q7TMY8-3; Q8C0G8; F6UYC1; Q7TMY8; Q7TMY8-2; A2AFQ0; Q8BKX3 E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=1; Isoform 4 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; Isoform 3 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=1; E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=5; Isoform 2 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=1; UBA domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1 0 2 2 0.6677 0 1 1 1 641.85181 1282.69634 1282.69528 0.82 0.00053 0/0 0 0 4864846.5 HCD 30 MS2 15.69462 165.9 110 37.6681 8773 8773 8771 QEplus033719.raw F4 172.2 138.2 182 141.9 175.3 185.7 298 3.22 1 FALSE 1.14E-05 3.28E-09 1.709 -250 28224 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSSRDPEPAMR [K].dSSRDPEPAMR.[S] N-Term(TMT6plex) 2 A0A0R4J0T8 ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Arfgap3 PE=1 SV=1 A0A0R4J0T8; Q9D8S3 ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Arfgap3 PE=1 SV=1; ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Arfgap3 PE=1 SV=2 1 3 3 0.5933 0 1 1 1 497.24747 1489.72785 1489.72666 0.8 0.0004 0/0 0 0 14289155 HCD 30 MS2 30.66366 517.2 110 37.6819 8779 8779 8771 QEplus033719.raw F4 550.2 406.4 538.4 432.7 653 522.7 77 3.86 1 FALSE 1.14E-05 2.59E-07 1.349 -250 28231 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTGNIGQER [R].dTGNIGQER.[V] N-Term(TMT6plex) 4 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q3TTX2; Q62261; A0A0A0MQG2; Q62261-2 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 2 2 0.5754 0 1 1 1 609.81763 1218.62798 1218.62759 0.31 0.00019 0/0 0 0 5559280.5 HCD 30 MS2 16.4513 355.3 110 37.6844 8780 8780 8771 QEplus033719.raw F4 396.2 280.3 408.4 272.6 345 429 181 3.25 2 FALSE 1.14E-05 2.37E-05 0.976 -250 28247 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSYGNGGAMR [K].gSYGNGGAMR.[V] N-Term(TMT6plex) 2 Q8CG72 ADP-ribose glycohydrolase ARH3 OS=Mus musculus OX=10090 GN=Adprs PE=1 SV=1 Q8CG72; Q8CG72-2 ADP-ribose glycohydrolase ARH3 OS=Mus musculus OX=10090 GN=Adprs PE=1 SV=1; Isoform 2 of ADP-ribose glycohydrolase ARH3 OS=Mus musculus OX=10090 GN=Adprs 0 2 2 0.4873 0 1 1 1 599.79529 1198.5833 1198.58362 -0.27 -0.00016 0/0 0 0 2566884.5 HCD 30 MS2 0 152.2 110 37.6968 8784 8784 8782 QEplus033719.raw F4 163.2 120.5 174.6 115.4 160 179.6 72 1.97 1 FALSE 0.002526 0.04981 0.143 -250 28287 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHPQPPPAQNQNQVR [K].qHPQPPPAQNQNQVR.[S] N-Term(TMT6plex) 5 Q8CBM0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1 Q8CBM0; Q3TCR9; Q8CD55; Q62523; Q7TQE2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Zyxin OS=Mus musculus OX=10090 GN=Zyx PE=1 SV=2; Zyx protein OS=Mus musculus OX=10090 GN=Zyx PE=1 SV=1 0 3 3 0.7558 0 1 1 1 656.68408 1968.03769 1968.03612 0.8 0.00052 0/0 0 0 6930781 HCD 30 MS2 25.31486 86.4 110 37.7109 8790 8790 8782 QEplus033719.raw F4 85.9 95.3 94.6 61.9 102.9 77.5 320 4.75 1 FALSE 1.14E-05 2.87E-09 1.72 -250 28293 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TMTPAEREENQR [K].tMTPAEREENQR.[M] N-Term(TMT6plex) 8 Q6P9L3 Bptf protein OS=Mus musculus OX=10090 GN=Bptf PE=2 SV=1 Q6P9L3; Q3TMJ3; Q8VDN7; E9Q6A7; Q3UPA6; E5D6T0; A2A655; A2A654 Bptf protein OS=Mus musculus OX=10090 GN=Bptf PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bptf PE=2 SV=1; Bptf protein (Fragment) OS=Mus musculus OX=10090 GN=Bptf PE=2 SV=1; Bromodomain PHD finger transcription factor OS=Mus musculus OX=10090 GN=Bptf PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bptf PE=2 SV=1; Bromodomain PHD finger transcription factor splice variant OS=Mus musculus OX=10090 GN=Bptf PE=2 SV=1; Bromodomain PHD finger transcription factor OS=Mus musculus OX=10090 GN=Bptf PE=1 SV=1; Bromodomain PHD finger transcription factor OS=Mus musculus OX=10090 GN=Bptf PE=1 SV=1 1 3 3 0.5406 0 1 1 1 564.28192 1690.83121 1690.838 -4.01 -0.00226 0/0 0 0 2188260.5 HCD 30 MS2 31.73608 179 110 37.7134 8791 8791 8782 QEplus033719.raw F4 173.6 145 195.8 151.7 209.7 198.1 149 2.83 1 FALSE 1.14E-05 0.0006727 0.697 -250 28301 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QNSSSSDSGGSIVR [R].qNSSSSDSGGSIVR.[D] N-Term(TMT6plex) 3 Q3U2Z5 SH3 domain-containing protein OS=Mus musculus OX=10090 GN=Eps8 PE=2 SV=1 Q3U2Z5; Q08509; Q3TMV3 SH3 domain-containing protein OS=Mus musculus OX=10090 GN=Eps8 PE=2 SV=1; Epidermal growth factor receptor kinase substrate 8 OS=Mus musculus OX=10090 GN=Eps8 PE=1 SV=2; SH3 domain-containing protein OS=Mus musculus OX=10090 GN=Eps8 PE=2 SV=1 0 2 2 0.7021 0 1 1 1 805.40485 1609.80242 1609.79791 2.8 0.00225 0/0 0 0 2167853.75 HCD 30 MS2 0 76.4 110 37.7159 8792 8792 8782 QEplus033719.raw F4 71.7 126.8 81.3 38.6 96.4 43.6 156 4.7 1 FALSE 1.14E-05 2.07E-13 2.507 -250 28311 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVHSNDGTQTAR [R].lVHSNDGTQTAR.[T] N-Term(TMT6plex) 5 D3Z3Q3 Smoothelin OS=Mus musculus OX=10090 GN=Smtn PE=1 SV=1 D3Z3Q3; Q921U8; Q921U8-2; Q921U8-4; Q921U8-3 Smoothelin OS=Mus musculus OX=10090 GN=Smtn PE=1 SV=1; Smoothelin OS=Mus musculus OX=10090 GN=Smtn PE=1 SV=2; Isoform L2 of Smoothelin OS=Mus musculus OX=10090 GN=Smtn; Isoform S2 of Smoothelin OS=Mus musculus OX=10090 GN=Smtn; Isoform S1 of Smoothelin OS=Mus musculus OX=10090 GN=Smtn 0 3 3 0.7828 0 1 1 1 509.9415 1527.80994 1527.80768 1.48 0.00075 0/0 0 0 10199426 HCD 30 MS2 8.677418 317.7 110 37.7232 8794 8794 8793 QEplus033719.raw F4 369.6 203.7 311.9 383.9 258.8 378.4 291 4.65 1 FALSE 1.14E-05 2.35E-08 1.547 -250 28318 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELGETQR [R].eLGETQR.[R] N-Term(TMT6plex) 5 A0A0G2JGL8 RNA helicase OS=Mus musculus OX=10090 GN=Dhx30 PE=1 SV=1 A0A0G2JGL8; Q99PU8-2; Q99PU8-3; Q80TP6; Q99PU8 RNA helicase OS=Mus musculus OX=10090 GN=Dhx30 PE=1 SV=1; Isoform 2 of ATP-dependent RNA helicase DHX30 OS=Mus musculus OX=10090 GN=Dhx30; Isoform 3 of ATP-dependent RNA helicase DHX30 OS=Mus musculus OX=10090 GN=Dhx30; MKIAA0890 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0890 PE=4 SV=3; ATP-dependent RNA helicase DHX30 OS=Mus musculus OX=10090 GN=Dhx30 PE=1 SV=1 0 2 2 0.2435 0 1 1 1 531.29303 1061.57878 1061.57885 -0.07 -0.00004 0/0 0 0 4978123 HCD 30 MS2 53.95853 583.2 110 37.7257 8795 8795 8793 QEplus033719.raw F4 580 472.7 585.6 617.4 634.3 609.5 237 2.3 1 FALSE 0.000565 0.008675 0.427 -250 28324 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAAEMGK [K].eAAEmGk.[G] N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex) 7 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; P62631; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Mus musculus OX=10090 GN=Eef1a2 PE=1 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 0 2 2 0.4144 0 1 1 1 605.33234 1209.6574 1209.65495 2.03 0.00123 0/0 0 0 12573357 HCD 30 MS2 22.42818 580.7 110 37.7305 8797 8797 8793 QEplus033719.raw F4 867 410.3 714.9 422.8 528.7 540.5 270 1.81 1 FALSE 0.001514 0.02285 0.259 -250 28330 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELGETQR [R].eLGETQR.[R] N-Term(TMT6plex) 5 A0A0G2JGL8 RNA helicase OS=Mus musculus OX=10090 GN=Dhx30 PE=1 SV=1 A0A0G2JGL8; Q99PU8-2; Q99PU8-3; Q80TP6; Q99PU8 RNA helicase OS=Mus musculus OX=10090 GN=Dhx30 PE=1 SV=1; Isoform 2 of ATP-dependent RNA helicase DHX30 OS=Mus musculus OX=10090 GN=Dhx30; Isoform 3 of ATP-dependent RNA helicase DHX30 OS=Mus musculus OX=10090 GN=Dhx30; MKIAA0890 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0890 PE=4 SV=3; ATP-dependent RNA helicase DHX30 OS=Mus musculus OX=10090 GN=Dhx30 PE=1 SV=1 0 2 2 0.2995 0 1 1 1 531.29303 1061.57878 1061.57885 -0.07 -0.00004 0/0 0 0 4978123 HCD 30 MS2 53.95853 583.2 110 37.7355 8799 8799 8793 QEplus033719.raw F4 580 472.7 585.6 617.4 634.3 609.5 237 2.17 1 FALSE 0.001177 0.01592 0.322 -250 28336 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTHPHFVR [KR].tTHPHFVR.[C] N-Term(TMT6plex) 6 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 Q2TAW4; P13541; B2RQQ1; Q5BKR0; Q6P8P3; Q3UQQ3 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh6 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myh6 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1" 0 2 2 0.5118 0 1 1 1 612.34662 1223.68596 1223.68466 1.07 0.00065 0/0 0 0 4065437.75 HCD 30 MS2 0 273.4 110 37.738 8800 8800 8793 QEplus033719.raw F4 342.9 61.4 256.1 488.1 88.6 403 288 2.54 1 FALSE 1.14E-05 0.0001705 0.813 -250 28352 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSPGCQVASNPR [R].nSPGcQVASNPR.[Q] N-Term(TMT6plex); C5(Carbamidomethyl) 2 Q9DBR1 5'-3' exoribonuclease 2 OS=Mus musculus OX=10090 GN=Xrn2 PE=1 SV=1 Q9DBR1; Q9DBR1-2 5'-3' exoribonuclease 2 OS=Mus musculus OX=10090 GN=Xrn2 PE=1 SV=1; Isoform 2 of 5'-3' exoribonuclease 2 OS=Mus musculus OX=10090 GN=Xrn2 0 2 2 0.7101 0 1 1 1 758.38214 1515.75701 1515.75354 2.29 0.00173 0/0 0 0 1147166 HCD 30 MS2 0 94 110 37.743 8802 8802 8793 QEplus033719.raw F4 94.7 90.9 103.2 56.7 123.4 94.8 152 4.45 1 FALSE 1.14E-05 2.66E-11 2.106 -250 28359 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATLNAR [K].aTLNAR.[T] N-Term(TMT6plex) 4 Q3ULG5 DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1 Q3ULG5; Q3UC10; Q8C5L1; P97311 DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=2 SV=1; DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Mcm6 PE=2 SV=1; DNA replication licensing factor MCM6 OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1 0 2 2 0.1886 0 1 1 1 437.76947 874.53166 874.53078 1.01 0.00044 0/0 0 0 31442896 HCD 30 MS2 49.12384 473.5 27.834 37.7453 8803 8803 8793 QEplus033719.raw F4 521.6 413.9 428.9 405.6 683.9 387.4 67 2.28 1 FALSE 0.002662 0.05303 0.133 -250 28379 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPGAAVGR [K].tPGAAVGR.[S] N-Term(TMT6plex) 8 Q71FD7 Filamin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Fblim1 PE=1 SV=2 Q71FD7; A2ADE6; A2ADE8; A2ADE7; A2ADF1; A2ADF2; A2ADE9; A2ADE5 Filamin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Fblim1 PE=1 SV=2; Filamin-binding LIM protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Fblim1 PE=1 SV=1; Filamin-binding LIM protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Fblim1 PE=1 SV=1; Filamin-binding LIM protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Fblim1 PE=1 SV=1; Filamin-binding LIM protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Fblim1 PE=1 SV=8; Filamin-binding LIM protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Fblim1 PE=1 SV=1; Filamin-binding LIM protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Fblim1 PE=1 SV=1; Filamin-binding LIM protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Fblim1 PE=1 SV=1 0 2 2 0.3757 0 1 1 1 479.28796 957.56865 957.5679 0.79 0.00038 0/0 0 0 23048940 HCD 30 MS2 42.05154 448.8 42.89 37.7549 8806 8806 8804 QEplus033719.raw F4 483.8 430.8 497.9 297.6 496.9 485.9 108 1.89 1 FALSE 0.001028 0.01331 0.355 -250 28396 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSSFNTGR [R].sSSFNTGR.[I] N-Term(TMT6plex) 1 Q8K0C9 "GDP-mannose 4,6 dehydratase OS=Mus musculus OX=10090 GN=Gmds PE=1 SV=1" Q8K0C9 "GDP-mannose 4,6 dehydratase OS=Mus musculus OX=10090 GN=Gmds PE=1 SV=1" 0 2 2 0.569 0 1 1 1 542.78394 1084.56059 1084.55845 1.97 0.00107 0/0 0 0 32019886 HCD 30 MS2 22.08605 594.9 43.91 37.7616 8809 8809 8804 QEplus033719.raw F4 562.2 579 648.5 433.9 757.5 588.1 102 2.9 1 FALSE 5.44E-05 0.001957 0.601 -250 28431 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRRPEGASNETERD [K].lRRPEGASNETERD.[-] N-Term(TMT6plex) 2 Q9R0A0 Peroxisomal membrane protein PEX14 OS=Mus musculus OX=10090 GN=Pex14 PE=1 SV=1 Q9R0A0; Q9QX52 Peroxisomal membrane protein PEX14 OS=Mus musculus OX=10090 GN=Pex14 PE=1 SV=1; Peroxin-14 (Fragment) OS=Mus musculus OX=10090 GN=Pex14 PE=3 SV=1 2 3 3 0.4721 0 1 1 1 620.32562 1858.96231 1858.95687 2.93 0.00182 0/0 0 0 2068842.125 HCD 30 MS2 0 126.7 110 37.7739 8814 8814 8804 QEplus033719.raw F4 138.9 95.5 120.5 93.6 186.9 125 294 2.69 1 FALSE 0.001142 0.0152 0.33 -250 28436 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GFGSEGSR [R].gFGSEGSR.[A] N-Term(TMT6plex) 1 Q9CWZ3-2 Isoform 2 of RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a Q9CWZ3-2 Isoform 2 of RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a 0 2 2 0.4268 0 1 1 1 513.26514 1025.523 1025.52134 1.62 0.00083 0/0 0 0 16916284 HCD 30 MS2 24.37615 679.8 91.231 37.7812 8816 8816 8815 QEplus033719.raw F4 659.1 615.8 689.9 561.9 830.2 722.1 88 2.46 1 FALSE 0.0002419 0.004857 0.505 -250 28445 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPQVGDR [K].tPQVGDR.[V] N-Term(TMT6plex) 4 Q8CH18 Cell division cycle and apoptosis regulator protein 1 OS=Mus musculus OX=10090 GN=Ccar1 PE=1 SV=1 Q8CH18-2; Q8CH18; A0A1W2P765; Q8CH18-3 Isoform 2 of Cell division cycle and apoptosis regulator protein 1 OS=Mus musculus OX=10090 GN=Ccar1; Cell division cycle and apoptosis regulator protein 1 OS=Mus musculus OX=10090 GN=Ccar1 PE=1 SV=1; Cell division cycle and apoptosis regulator protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ccar1 PE=1 SV=1; Isoform 3 of Cell division cycle and apoptosis regulator protein 1 OS=Mus musculus OX=10090 GN=Ccar1 0 2 2 0.3671 0 1 1 1 501.2829 1001.55852 1001.55772 0.79 0.0004 0/0 0 0 9911087 HCD 30 MS2 40.2424 595.8 110 37.7837 8817 8817 8815 QEplus033719.raw F4 654.5 489.6 615 451.2 745.8 618.9 130 2.07 1 FALSE 0.004923 0.0861 0.045 -250 28469 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STVPGSDPQR [R].sTVPGSDPQR.[S] N-Term(TMT6plex) 1 Q9D9H8 UPF0565 protein C2orf69 homolog OS=Mus musculus OX=10090 PE=2 SV=3 Q9D9H8 UPF0565 protein C2orf69 homolog OS=Mus musculus OX=10090 PE=2 SV=3 0 2 2 0.5161 0 1 1 1 636.84021 1272.67314 1272.67454 -1.1 -0.0007 0/0 0 0 3619466.25 HCD 30 MS2 0 145.9 110 37.7983 8823 8823 8815 QEplus033719.raw F4 159.1 124.9 144.8 112.7 171.3 162.3 180 2.79 1 FALSE 0.002696 0.05385 0.131 -250 28486 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAENPPSGSVR [R].sAENPPSGSVR.[K] N-Term(TMT6plex) 7 Q3U6G8 Mortality factor 4-like protein 2 OS=Mus musculus OX=10090 GN=Morf4l2 PE=2 SV=1 Q3U6G8; A2AEB3; A2AEB4; Q3TXN7; Q9R0Q4; Q3TME1; A2AEB5 Mortality factor 4-like protein 2 OS=Mus musculus OX=10090 GN=Morf4l2 PE=2 SV=1; Mortality factor 4-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Morf4l2 PE=1 SV=1; Mortality factor 4-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Morf4l2 PE=1 SV=8; Mortality factor 4-like protein 2 OS=Mus musculus OX=10090 GN=Morf4l2 PE=2 SV=1; Mortality factor 4-like protein 2 OS=Mus musculus OX=10090 GN=Morf4l2 PE=1 SV=1; Mortality factor 4-like protein 2 OS=Mus musculus OX=10090 GN=Morf4l2 PE=2 SV=1; Mortality factor 4-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Morf4l2 PE=1 SV=1 0 2 2 0.4276 0 1 1 1 665.35187 1329.69646 1329.69601 0.34 0.00023 0/0 0 0 2686810.5 HCD 30 MS2 48.24071 225.3 110 37.8033 8825 8825 8815 QEplus033719.raw F4 195.1 215.3 234.2 164.7 274.7 267.6 191 3.04 1 FALSE 1.14E-05 2.30E-06 1.169 -250 28493 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGGATER [K].iGGATER.[M] N-Term(TMT6plex) 2 P97807 "Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh PE=1 SV=3" P97807; P97807-2 "Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh PE=1 SV=3; Isoform Cytoplasmic of Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh" 0 2 2 0.1055 0 1 1 1 466.77338 932.53948 932.53626 3.45 0.00161 0/0 0 0 20980130 HCD 30 MS2 27.28556 585.7 38.599 37.8106 8827 8827 8826 QEplus033719.raw F4 599.3 470.4 597 562.5 746.2 538.9 279 1.99 1 FALSE 0.002199 0.0425 0.166 -250 28503 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESCDSALR [R].eScDSALR.[A] N-Term(TMT6plex); C3(Carbamidomethyl) 5 P47753 F-actin-capping protein subunit alpha-1 OS=Mus musculus OX=10090 GN=Capza1 PE=1 SV=4 P47753; Q5RKN9; Q3UJV2; Q3TLJ0; Q3UAS2 F-actin-capping protein subunit alpha-1 OS=Mus musculus OX=10090 GN=Capza1 PE=1 SV=4; F-actin-capping protein subunit alpha OS=Mus musculus OX=10090 GN=Capza1 PE=1 SV=1; F-actin-capping protein subunit alpha OS=Mus musculus OX=10090 GN=Capza1 PE=2 SV=1; F-actin-capping protein subunit alpha OS=Mus musculus OX=10090 GN=Capza1 PE=2 SV=1; F-actin-capping protein subunit alpha OS=Mus musculus OX=10090 GN=Capza1 PE=2 SV=1 0 2 2 0.5 0 1 1 1 583.78668 1166.56609 1166.5673 -1.04 -0.00061 0/0 0 0 1775628.25 HCD 30 MS2 55.6539 277.9 110 37.8131 8828 8828 8826 QEplus033719.raw F4 288.3 223.5 271.8 214.1 396 274 83 2.4 1 FALSE 0.001421 0.02037 0.278 -250 28508 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTHPHFVR [KR].tTHPHFVR.[C] N-Term(TMT6plex) 6 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 Q2TAW4; P13541; B2RQQ1; Q5BKR0; Q6P8P3; Q3UQQ3 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh6 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myh6 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1" 0 3 3 0.619 0 1 1 1 408.56686 1223.68604 1223.68466 1.13 0.00046 0/0 0 0 155771344 HCD 30 MS2 6.06052 213.3 7.951 37.8154 8829 8829 8826 QEplus033719.raw F4 243.7 68 194.2 388.6 75.3 310.3 288 3.57 1 FALSE 1.14E-05 9.20E-05 0.864 -250 28517 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLTEGTR [K].qLTEGTR.[L] N-Term(TMT6plex) 4 A0A3Q4EBK4 Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1 Q6P1B9; O08539-2; A0A3Q4EBK4; O08539 Bin1 protein OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Isoform 2 of Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1; Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1 0 2 2 0.464 0 1 1 1 517.29633 1033.58537 1033.58394 1.39 0.00072 0/0 0 0 96321328 HCD 30 MS2 14.64046 629.1 14.045 37.8176 8830 8830 8826 QEplus033719.raw F4 808.4 284.1 624.8 854.9 387.1 815.3 255 2.5 1 FALSE 0.0005556 0.008263 0.434 -250 28526 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DELQSER [K].dELQSER.[N] N-Term(TMT6plex) 4 Q9CW03 Structural maintenance of chromosomes protein 3 OS=Mus musculus OX=10090 GN=Smc3 PE=1 SV=2 Q3UNU2; Q6PIE1; Q9CW03; Q6P5E5 Chondroitin sulfate proteoglycan 6 (Fragment) OS=Mus musculus OX=10090 GN=Smc3 PE=2 SV=1; Structural maintenance of chromosomes protein 1A (Fragment) OS=Mus musculus OX=10090 GN=Smc3 PE=2 SV=1; Structural maintenance of chromosomes protein 3 OS=Mus musculus OX=10090 GN=Smc3 PE=1 SV=2; Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc3 PE=2 SV=1 0 2 2 0.3297 0 1 1 1 553.28827 1105.56926 1105.56868 0.52 0.00029 0/0 0 0 7106930.5 HCD 30 MS2 45.67546 509.5 110 37.8224 8832 8832 8826 QEplus033719.raw F4 529.8 448.3 524.1 354.4 690.5 509.7 170 2.79 1 FALSE 5.44E-05 0.002098 0.594 -250 28535 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTNESLER [RK].gTNESLER.[Q-] N-Term(TMT6plex) 11 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 P03995; A0MTM0; A0A0A6YWC8; Q3TWV0; P03995-2; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Glial fibrillary acidic protein OS=Mus musculus OX=10090 GN=Gfap PE=1 SV=4; Glial fibrillary acidic protein (Fragment) OS=Mus musculus OX=10090 GN=Gfap PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Isoform 2 of Glial fibrillary acidic protein OS=Mus musculus OX=10090 GN=Gfap; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.2508 0 1 1 1 567.80212 1134.59697 1134.59523 1.53 0.00087 0/0 0 0 5031670 HCD 30 MS2 0 296.6 110 37.8274 8834 8834 8826 QEplus033719.raw F4 289.1 291.8 310.4 208.4 391.9 288.3 227 2.95 2 FALSE 1.14E-05 5.44E-05 0.907 -250 28549 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTQSVSGQDGSSQRPTPTR [R].gTQSVSGQDGSSQRPTPTR.[I] N-Term(TMT6plex) 2 Q059P4 Filamin-A-interacting protein 1 OS=Mus musculus OX=10090 GN=Filip1 PE=1 SV=1 Q059P4; A0A5F8MPD6 Filamin-A-interacting protein 1 OS=Mus musculus OX=10090 GN=Filip1 PE=1 SV=1; Filamin-A-interacting protein 1 OS=Mus musculus OX=10090 GN=Filip1 PE=1 SV=1 0 3 3 0.6846 0 1 1 1 725.70337 2175.09555 2175.09515 0.19 0.00013 0/0 0 0 2529585.5 HCD 30 MS2 0 56.4 110 37.8324 8836 8836 8826 QEplus033719.raw F4 61.9 24.7 66.4 71.2 24.8 89.5 239 4.47 1 FALSE 1.14E-05 5.27E-12 2.24 -250 28554 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDPVTGR [K].tDPVTGR.[S] N-Term(TMT6plex) 3 F6VQH5 Heterogeneous nuclear ribonucleoprotein D-like (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpdl PE=1 SV=1 F6VQH5; Q9Z130; D3YTQ3 Heterogeneous nuclear ribonucleoprotein D-like (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpdl PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein D-like OS=Mus musculus OX=10090 GN=Hnrnpdl PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein D-like OS=Mus musculus OX=10090 GN=Hnrnpdl PE=1 SV=1 0 2 2 0.289 0 1 1 1 487.77747 974.54766 974.54683 0.85 0.00041 0/0 0 0 151082464 HCD 30 MS2 52.20856 476.2 6.987 37.8397 8838 8838 8837 QEplus033719.raw F4 496.5 415.1 495.3 375.1 596.9 478.4 261 2.18 1 FALSE 0.001591 0.02469 0.246 -250 28560 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGATGGLSGGESR [R].sGATGGLSGGESR.[A] N-Term(TMT6plex) 1 Q9CXS4 Centromere protein V OS=Mus musculus OX=10090 GN=Cenpv PE=1 SV=2 Q9CXS4 Centromere protein V OS=Mus musculus OX=10090 GN=Cenpv PE=1 SV=2 0 2 2 0.581 0 1 1 1 682.85297 1364.69866 1364.69674 1.41 0.00096 0/0 0 0 3261256.25 HCD 30 MS2 21.71083 131.2 110 37.8422 8839 8839 8837 QEplus033719.raw F4 126.7 98.5 149.3 130.8 131 150.6 210 4.32 1 FALSE 1.14E-05 6.45E-12 2.223 -250 28570 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGSGVER [R].mGSGVER.[M] N-Term(TMT6plex) 8 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; Q9D0E1-2; Q3TQ66; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 2 2 0.3559 0 1 1 1 482.75824 964.5092 964.50833 0.9 0.00044 0/0 0 0 52693460 HCD 30 MS2 20.52683 608.3 21.962 37.8445 8840 8840 8837 QEplus033719.raw F4 568.8 621.1 669.4 446.3 791.1 553 130 2.22 1 FALSE 0.001903 0.03245 0.205 -250 28580 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSPGCQVASNPR [R].nSPGcQVASNPR.[Q] N-Term(TMT6plex); C5(Carbamidomethyl) 2 Q9DBR1 5'-3' exoribonuclease 2 OS=Mus musculus OX=10090 GN=Xrn2 PE=1 SV=1 Q9DBR1; Q9DBR1-2 5'-3' exoribonuclease 2 OS=Mus musculus OX=10090 GN=Xrn2 PE=1 SV=1; Isoform 2 of 5'-3' exoribonuclease 2 OS=Mus musculus OX=10090 GN=Xrn2 0 3 3 0.7529 0 1 1 1 505.92325 1515.75519 1515.75354 1.09 0.00055 0/0 0 0 9920745 HCD 30 MS2 39.58596 463.1 110 37.847 8841 8841 8837 QEplus033719.raw F4 469.9 319.9 463.7 484.9 502.7 537.8 140 4.25 1 FALSE 1.14E-05 1.66E-05 1.006 -250 28593 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADGSQMAEER [R].aDGSQMAEER.[I] N-Term(TMT6plex) 1 Q6PHQ8 "N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Mus musculus OX=10090 GN=Naa35 PE=1 SV=1" Q6PHQ8 "N-alpha-acetyltransferase 35, NatC auxiliary subunit OS=Mus musculus OX=10090 GN=Naa35 PE=1 SV=1" 0 2 2 0.635 0 1 1 1 661.81494 1322.62261 1322.62079 1.37 0.00091 0/0 0 0 5141478 HCD 30 MS2 22.38596 296.3 110 37.852 8843 8843 8837 QEplus033719.raw F4 278.4 243.2 298.4 310.2 345.1 302.4 33 3.37 1 FALSE 1.14E-05 2.86E-05 0.961 -250 28601 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HDVTCTVSGGGR [R].hDVTcTVSGGGR.[S] N-Term(TMT6plex); C5(Carbamidomethyl) 4 Q9D7N3 "28S ribosomal protein S9, mitochondrial OS=Mus musculus OX=10090 GN=Mrps9 PE=1 SV=3" Q78IX0; Q9ER89; Q9D7N3; A0A1S6GWG5 "Mrps9 protein OS=Mus musculus OX=10090 GN=Mrps9 PE=2 SV=1; Muscle protein 637 OS=Mus musculus OX=10090 GN=Mrps9 PE=2 SV=1; 28S ribosomal protein S9, mitochondrial OS=Mus musculus OX=10090 GN=Mrps9 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mrps9 PE=2 SV=1" 0 2 2 0.8226 0 1 1 1 737.86859 1474.72991 1474.72699 1.98 0.00146 0/0 0 0 1968830 HCD 30 MS2 0 96 110 37.8545 8844 8844 8837 QEplus033719.raw F4 105.7 78.6 100.2 95.7 101.3 94.7 132 3.1 1 FALSE 1.14E-05 1.59E-09 1.769 -250 28604 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVEDAEDRETR [K].sVEDAEDRETR.[K] N-Term(TMT6plex) 1 Q9JJF9 Signal peptide peptidase-like 2A OS=Mus musculus OX=10090 GN=Sppl2a PE=1 SV=2 Q9JJF9 Signal peptide peptidase-like 2A OS=Mus musculus OX=10090 GN=Sppl2a PE=1 SV=2 1 3 3 0.6254 0 1 1 1 512.58832 1535.7504 1535.74989 0.33 0.00017 0/0 0 0 8348988 HCD 30 MS2 0 369.8 110 37.857 8845 8845 8837 QEplus033719.raw F4 367.2 353.9 396.7 333.2 380 387.6 105 3.47 1 FALSE 1.14E-05 1.57E-05 1.01 -250 28610 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HPIQVSR [R].hPIQVSR.[R] N-Term(TMT6plex) 3 Q925I1 ATPase family AAA domain-containing protein 3 OS=Mus musculus OX=10090 GN=Atad3 PE=1 SV=1 Q925I1-2; H3BK90; Q925I1 "Isoform 2 of ATPase family AAA domain-containing protein 3 OS=Mus musculus OX=10090 GN=Atad3; ATPase family, AAA domain-containing 3A (Fragment) OS=Mus musculus OX=10090 GN=Atad3a PE=1 SV=1; ATPase family AAA domain-containing protein 3 OS=Mus musculus OX=10090 GN=Atad3 PE=1 SV=1" 0 3 3 0.2205 0 1 1 1 355.88376 1065.63672 1065.63664 0.07 0.00003 0/0 0 0 6593701.5 HCD 30 MS2 42.21865 370.5 110 37.8595 8846 8846 8837 QEplus033719.raw F4 524.4 230.5 367.3 374.7 387.3 338.5 78 2.63 1 FALSE 0.00079 0.01102 0.388 -250 28624 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGGYQPSDEHK [R].hGGYQPSDEHk.[T] N-Term(TMT6plex); K11(TMT6plex) 1 Q04447 Creatine kinase B-type OS=Mus musculus OX=10090 GN=Ckb PE=1 SV=1 Q04447 Creatine kinase B-type OS=Mus musculus OX=10090 GN=Ckb PE=1 SV=1 0 3 3 0.7062 0 1 1 1 571.63068 1712.87748 1712.87565 1.06 0.00061 0/0 0 0 5803013.5 HCD 30 MS2 0 243.6 110 37.8693 8849 8849 8848 QEplus033719.raw F4 328.6 110.8 224.8 374.7 164.1 258.6 249 5.31 1 FALSE 1.14E-05 1.65E-10 1.956 -250 28634 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSTAVGVR [K].gSTAVGVR.[G] N-Term(TMT6plex) 4 Q542H2 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma7 PE=1 SV=1 Q3TN31; Q542H2; Q3UIT9; A0A338P7D7 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma7 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma7 PE=1 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma7 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma7 PE=1 SV=1 0 2 2 0.1505 0 1 1 1 488.29315 975.57903 975.57846 0.58 0.00028 0/0 0 0 134855232 HCD 30 MS2 48.85841 566 6.176 37.8741 8851 8851 8848 QEplus033719.raw F4 581.5 472.7 572.4 464.4 714.8 590.4 99 1.86 1 FALSE 0.0006294 0.00966 0.41 -250 28642 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KHEGFER [R].kHEGFER.[D] N-Term(TMT6plex); K1(TMT6plex) 9 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; B2RXX6; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 1 3 3 0.4018 0 1 1 1 454.26328 1360.77527 1360.77375 1.12 0.00051 0/0 0 0 12090861 HCD 30 MS2 57.47787 725 110 37.8788 8853 8853 8848 QEplus033719.raw F4 753.8 506.7 753.7 784.2 853.7 697.8 446 2.24 2 FALSE 0.0002019 0.004062 0.525 -250 28658 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CGEELGR [K].cGEELGR.[L] N-Term(TMT6plex); C1(Carbamidomethyl) 8 Q9CX56 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=1 SV=2 Q9CX56; Q3TG45; Q99JB5; Q3TW90; Q9CPS5; Q3TI95; Q8BKP5; Q3TVY0 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=1 SV=2; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=1 SV=2; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=2 SV=1 0 2 2 0.5645 0 1 1 1 525.26343 1049.51958 1049.52471 -4.89 -0.00257 0/0 0 0 3713469.5 HCD 30 MS2 35.20375 606.3 110 37.8836 8855 8855 8848 QEplus033719.raw F4 771.4 425 596.3 525.6 694.6 625.1 118 1.86 1 FALSE 0.001607 0.02514 0.243 -250 28663 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAREEAEEK [R].eAREEAEEk.[S] N-Term(TMT6plex); K9(TMT6plex) 2 P34022 Ran-specific GTPase-activating protein OS=Mus musculus OX=10090 GN=Ranbp1 PE=1 SV=2 P34022; H7BX22 Ran-specific GTPase-activating protein OS=Mus musculus OX=10090 GN=Ranbp1 PE=1 SV=2; Ran-specific GTPase-activating protein OS=Mus musculus OX=10090 GN=Ranbp1 PE=1 SV=1 1 2 2 0.479 0 1 1 1 774.91821 1548.82915 1548.82697 1.41 0.00109 0/0 0 0 3665761.25 HCD 30 MS2 0 101.3 110 37.8884 8857 8857 8848 QEplus033719.raw F4 173.8 75.1 117.2 75.4 83.4 83 310 2.38 1 FALSE 1.14E-05 1.84E-05 0.997 -250 28689 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSSSPSLR [K].dSSSPSLR.[S] N-Term(TMT6plex) 1 Q9JLN9 Serine/threonine-protein kinase mTOR OS=Mus musculus OX=10090 GN=Mtor PE=1 SV=2 Q9JLN9 Serine/threonine-protein kinase mTOR OS=Mus musculus OX=10090 GN=Mtor PE=1 SV=2 0 2 2 0.3268 0 1 1 1 539.29089 1077.57451 1077.57377 0.69 0.00037 0/0 0 0 6352251 HCD 30 MS2 29.38159 513.2 110 37.908 8863 8863 8861 QEplus033719.raw F4 510.6 397.1 551.4 483.5 547.7 588.6 228 2.57 1 FALSE 0.001185 0.01603 0.32 -250 28698 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTSEDTSSGSPPK [K].rTSEDTSSGSPPk.[K] N-Term(TMT6plex); K13(TMT6plex) 2 Q3UYQ4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Api5 PE=2 SV=1 Q3UYQ4; O35841 Uncharacterized protein OS=Mus musculus OX=10090 GN=Api5 PE=2 SV=1; Apoptosis inhibitor 5 OS=Mus musculus OX=10090 GN=Api5 PE=1 SV=2 1 3 3 0.6135 0 1 1 1 602.99219 1806.96201 1806.95978 1.24 0.00074 0/0 0 0 13672316 HCD 30 MS2 21.01197 308.8 110 37.9105 8864 8864 8861 QEplus033719.raw F4 319 262.3 341.6 248.6 370.1 311.1 346 5.2 1 FALSE 1.14E-05 4.66E-13 2.44 -250 28728 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGPPPSSGMSSR [R].sGPPPSSGMSSR.[V] N-Term(TMT6plex) 7 V9GXJ1 "Predicted gene, 28036 OS=Mus musculus OX=10090 GN=Gm28036 PE=4 SV=1" V9GXJ1; Q8R4X3; Q6ZQ53; B7ZCQ0; B7ZCP9; B7ZCQ1; F6YJB6 "Predicted gene, 28036 OS=Mus musculus OX=10090 GN=Gm28036 PE=4 SV=1; RNA-binding protein 12 OS=Mus musculus OX=10090 GN=Rbm12 PE=1 SV=3; MKIAA0765 protein (Fragment) OS=Mus musculus OX=10090 GN=Cpne1 PE=2 SV=1; RNA-binding protein 12 (Fragment) OS=Mus musculus OX=10090 GN=Rbm12 PE=4 SV=1; RNA-binding protein 12 (Fragment) OS=Mus musculus OX=10090 GN=Rbm12 PE=4 SV=1; RNA-binding protein 12 (Fragment) OS=Mus musculus OX=10090 GN=Rbm12 PE=4 SV=8; Predicted gene, 28036 (Fragment) OS=Mus musculus OX=10090 GN=Gm28036 PE=4 SV=1" 0 2 2 0.5447 0 1 1 1 688.34595 1375.68462 1375.68373 0.65 0.00044 0/0 0 0 1672146 HCD 30 MS2 0 101.7 110 37.9228 8869 8869 8861 QEplus033719.raw F4 115.1 100.4 111.1 67.6 119 96.9 123 3.58 1 FALSE 1.14E-05 9.23E-07 1.244 -250 28754 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEAQSVEQER [K].qEAQSVEQER.[H] N-Term(TMT6plex) 3 Q3TSB2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zbed3 PE=2 SV=1 Q3TSB2; Q3UTC5; Q9D0L1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zbed3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zbed3 PE=2 SV=1; Zinc finger BED domain-containing protein 3 OS=Mus musculus OX=10090 GN=Zbed3 PE=1 SV=1 0 2 2 0.6063 0 1 1 1 716.86694 1432.72661 1432.72295 2.55 0.00183 0/0 0 0 1535317.125 HCD 30 MS2 0 57.6 110 37.9375 8874 8874 8872 QEplus033719.raw F4 66.8 52.6 52.8 37.5 82.6 53.6 189 3.48 1 FALSE 1.14E-05 8.38E-08 1.442 -250 28768 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGENFR [K].tGENFR.[L] N-Term(TMT6plex) 4 P62702 "40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2" V9GWY0; Q545F8; P62702; Q3UXQ6 "40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Gm15013 PE=3 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1; 40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1" 0 2 2 0.3929 0 1 1 1 476.7569 952.50652 952.50496 1.63 0.00078 0/0 0 0 20466176 HCD 30 MS2 19.87511 937.5 68.674 37.942 8876 8876 8872 QEplus033719.raw F4 979.7 772.5 1003.6 796.8 1038.6 1033.8 48 2.24 1 FALSE 0.003497 0.06758 0.094 -250 28785 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDSADLR [R].cDSADLR.[H] N-Term(TMT6plex); C1(Carbamidomethyl) 9 Q8K019 Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=2 Q8K019; A0A087WRN1; F8WI22; Q8K019-3; Q8K019-2; A0A087WQA0; Q3UR37; Q3UDL9; Q3TSZ0 Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=2; Bcl-2-associated transcription factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Isoform 3 of Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1; Isoform 2 of Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1; Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1 0 2 2 0.568 0 1 1 1 533.26471 1065.52214 1065.51962 2.36 0.00126 0/0 0 0 12864194 HCD 30 MS2 31.67638 740.9 110 37.9513 8880 8880 8872 QEplus033719.raw F4 781.2 657.9 787.9 620.7 830.4 767.4 92 2.5 1 FALSE 0.0002518 0.005224 0.496 -250 28793 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERDVENPDEPR [K].eRDVENPDEPR.[E] N-Term(TMT6plex) 4 A0A0A6YWM5 Rab3 GTPase-activating protein non-catalytic subunit OS=Mus musculus OX=10090 GN=Rab3gap2 PE=1 SV=1 A0A0A6YWM5; E9QKE4; Q3UEY3; Q8BMG7 Rab3 GTPase-activating protein non-catalytic subunit OS=Mus musculus OX=10090 GN=Rab3gap2 PE=1 SV=1; Rab3 GTPase-activating protein non-catalytic subunit OS=Mus musculus OX=10090 GN=Rab3gap2 PE=1 SV=1; RAB3GAP2_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rab3gap2 PE=2 SV=1; Rab3 GTPase-activating protein non-catalytic subunit OS=Mus musculus OX=10090 GN=Rab3gap2 PE=1 SV=2 1 3 3 0.7398 0 1 1 1 528.93207 1584.78165 1584.78153 0.08 0.00004 0/0 0 0 3553365.5 HCD 30 MS2 14.29527 244.6 110 37.9537 8881 8881 8872 QEplus033719.raw F4 261.5 183.6 248.3 236 269.9 268.2 139 4.65 1 FALSE 1.14E-05 3.05E-09 1.715 -250 28796 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDPPPPGMR [R].rDPPPPGMR.[E] N-Term(TMT6plex) 4 Q80U72 Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib PE=1 SV=2 Q80U72-4; Q80U72-2; Q80U72-3; Q80U72 Isoform 4 of Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib; Isoform 2 of Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib; Isoform 3 of Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib; Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib PE=1 SV=2 1 3 3 0.512 0 1 1 1 417.89972 1251.6846 1251.68294 1.33 0.00055 0/0 0 0 3282367.75 HCD 30 MS2 61.74278 378.2 110 37.9562 8882 8882 8872 QEplus033719.raw F4 485.5 234.1 423.5 372.5 371.9 381.5 242 3.32 1 FALSE 1.14E-05 0.0007143 0.692 -250 28813 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHAAEHTLR [K].vHAAEHTLR.[N] N-Term(TMT6plex) 1 Q8VE47 Ubiquitin-like modifier-activating enzyme 5 OS=Mus musculus OX=10090 GN=Uba5 PE=1 SV=2 Q8VE47 Ubiquitin-like modifier-activating enzyme 5 OS=Mus musculus OX=10090 GN=Uba5 PE=1 SV=2 0 2 2 0.5059 0 1 1 1 631.86243 1262.71758 1262.71668 0.71 0.00045 0/0 0 0 1164052.875 HCD 30 MS2 62.04357 154.3 110 37.9661 8885 8885 8883 QEplus033719.raw F4 156.7 141.2 175.9 118.9 176.4 156.9 458 2.55 1 FALSE 1.14E-05 0.0009244 0.669 -250 28822 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EELEEEHR [K].eELEEEHR.[VI] N-Term(TMT6plex) 2 Q9CZH7 Matrix-remodeling-associated protein 7 OS=Mus musculus OX=10090 GN=Mxra7 PE=1 SV=2 Q9CZH7; Q9D1T2 Matrix-remodeling-associated protein 7 OS=Mus musculus OX=10090 GN=Mxra7 PE=1 SV=2; Matrix-remodeling-associated protein 7 OS=Mus musculus OX=10090 GN=Mxra7 PE=1 SV=1 0 3 3 0.7114 0 1 1 1 433.88419 1299.638 1299.63783 0.14 0.00006 0/0 0 0 26974788 HCD 30 MS2 22.02427 608.1 66.469 37.9683 8886 8886 8883 QEplus033719.raw F4 830.5 422.1 559.1 582 718.2 536.6 82 3.43 1 FALSE 1.14E-05 0.0005504 0.714 -250 28835 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSLQTSSTR [K].tSLQTSSTR.[I] N-Term(TMT6plex) 3 E9QMN5 Transcriptional repressor p66 alpha OS=Mus musculus OX=10090 GN=Gatad2a PE=1 SV=1 E9QMN5; Q8CHY6; A0A1I7Q4G8 Transcriptional repressor p66 alpha OS=Mus musculus OX=10090 GN=Gatad2a PE=1 SV=1; Transcriptional repressor p66 alpha OS=Mus musculus OX=10090 GN=Gatad2a PE=1 SV=2; Transcriptional repressor p66 alpha OS=Mus musculus OX=10090 GN=Gatad2a PE=1 SV=1 0 2 2 0.5663 0 1 1 1 605.33545 1209.66362 1209.66365 -0.02 -0.00001 0/0 0 0 17007392 HCD 30 MS2 27.86945 529.9 110 37.9731 8888 8888 8883 QEplus033719.raw F4 594.2 475.8 575.3 370.7 672.7 490.6 271 2.79 1 FALSE 3.35E-05 0.001187 0.647 -250 28842 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQLQSHGVQAR [R].gQLQSHGVQAR.[E] N-Term(TMT6plex) 5 Q99KG3 RNA-binding protein 10 OS=Mus musculus OX=10090 GN=Rbm10 PE=1 SV=1 Q99KG3; Q99KG3-2; Q566J0; Q8BY56; Q99KG3-3 RNA-binding protein 10 OS=Mus musculus OX=10090 GN=Rbm10 PE=1 SV=1; Isoform 2 of RNA-binding protein 10 OS=Mus musculus OX=10090 GN=Rbm10; Rbm10 protein (Fragment) OS=Mus musculus OX=10090 GN=Rbm10 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rbm10 PE=2 SV=1; Isoform 3 of RNA-binding protein 10 OS=Mus musculus OX=10090 GN=Rbm10 0 3 3 0.5733 0 1 1 1 470.59885 1409.78199 1409.78108 0.65 0.0003 0/0 0 0 12676693 HCD 30 MS2 40.7435 622.2 110 37.9756 8889 8889 8883 QEplus033719.raw F4 624.9 458.3 676.4 652.9 614.5 706.2 370 4.64 1 FALSE 1.14E-05 6.76E-09 1.649 -250 28877 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCPVVR [RK].scPVVR.[SM] N-Term(TMT6plex); C2(Carbamidomethyl) 6 Q6NXX7; Q68FL6 "Abce1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1;Methionine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Mars1 PE=1 SV=1" E9QB02; Q6NXX7; Q3TJM9; Q68FL6; Q3UHY8; Q3TIU8 "Methionine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Mars1 PE=1 SV=1; Abce1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1; Methionine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Mars1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1" 0 2 2 0.2653 0 1 1 1 473.77133 946.53539 946.53415 1.3 0.00062 0/0 0 0 56461360 HCD 30 MS2 11.92222 519.6 18.644 37.9929 8895 8895 8894 QEplus033719.raw F4 569 361.2 492.1 501.4 626.1 568 197 1.96 2 FALSE 0.003658 0.07008 0.087 -250 28892 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLVAEGHR [R].gLVAEGHR.[L] N-Term(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 3 3 0.5127 0 1 1 1 356.5437 1067.61655 1067.61591 0.6 0.00021 0/0 0 0 60318940 HCD 30 MS2 19.72187 131.2 17.8 37.9976 8897 8897 8894 QEplus033719.raw F4 150.3 98 144.2 118.6 130.7 145.6 127 3.55 1 FALSE 1.14E-05 9.02E-05 0.866 -250 28907 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVEYSSGR [R].nVEYSSGR.[N] N-Term(TMT6plex) 1 Q9WV35 C->U-editing enzyme APOBEC-2 OS=Mus musculus OX=10090 GN=Apobec2 PE=1 SV=1 Q9WV35 C->U-editing enzyme APOBEC-2 OS=Mus musculus OX=10090 GN=Apobec2 PE=1 SV=1 0 2 2 0.7466 0 1 1 1 570.79694 1140.5866 1140.58467 1.69 0.00096 0/0 0 0 39362532 HCD 30 MS2 11.83331 830.4 54.955 38.0022 8899 8899 8894 QEplus033719.raw F4 1041.7 254 699.6 1363.5 361 1262.4 129 2.92 1 FALSE 0.0001707 0.003921 0.529 -250 28911 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQLEGAR [K].dQLEGAR.[Q] N-Term(TMT6plex) 4 Q8VE91-1 Isoform 1 of Reticulophagy regulator 1 OS=Mus musculus OX=10090 GN=Retreg1 Q8VE91-2; Q8VE91-3; Q8VE91-1; Q8VE91 Isoform 2 of Reticulophagy regulator 1 OS=Mus musculus OX=10090 GN=Retreg1; Isoform 3 of Reticulophagy regulator 1 OS=Mus musculus OX=10090 GN=Retreg1; Isoform 1 of Reticulophagy regulator 1 OS=Mus musculus OX=10090 GN=Retreg1; Reticulophagy regulator 1 OS=Mus musculus OX=10090 GN=Retreg1 PE=1 SV=2 0 2 2 0.1217 0 1 1 1 509.28027 1017.55327 1017.55264 0.62 0.00032 0/0 0 0 22746642 HCD 30 MS2 7.255304 794.2 76.073 38.0067 8901 8901 8894 QEplus033719.raw F4 844.8 541.5 843.2 729.6 1003.6 802.8 171 1.89 1 FALSE 0.00315 0.0617 0.109 -250 28928 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TMYSQDR [K].tMYSQDR.[H] N-Term(TMT6plex) 1 Q9CXW2 "28S ribosomal protein S22, mitochondrial OS=Mus musculus OX=10090 GN=Mrps22 PE=1 SV=1" Q9CXW2 "28S ribosomal protein S22, mitochondrial OS=Mus musculus OX=10090 GN=Mrps22 PE=1 SV=1" 0 2 2 0.6796 0 1 1 1 565.28009 1129.5529 1129.55092 1.75 0.00099 0/0 0 0 5812579.5 HCD 30 MS2 0 501.9 110 38.0117 8903 8903 8894 QEplus033719.raw F4 511.2 448.2 554.5 509 455.7 532.5 40 2.84 1 FALSE 0.0006294 0.009325 0.416 -250 28944 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDDGGSPIR [K].qDDGGSPIR.[H] N-Term(TMT6plex) 8 E9QB01; A0A0A6YY47 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2;Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 E9QB01; Q6LBT4; P13595-3; P13595-2; A0A0A6YY91; A0A0A6YY47; P13595; E9Q589 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2; Ncam gene exon 13 for neural cell adhesion molecule (NCAM) (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Isoform 3 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Isoform 2 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 (Fragment) OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=3; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 0 2 2 0.4368 0 1 1 1 587.30756 1173.60784 1173.60613 1.45 0.00085 0/0 0 0 8646056 HCD 30 MS2 29.84443 519.1 110 38.0215 8906 8906 8905 QEplus033719.raw F4 559.1 348.9 606.2 494 488.9 617.6 125 2.77 2 FALSE 1.14E-05 0.0002373 0.785 -250 28955 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YVGEGAR [K].yVGEGAR.[M] N-Term(TMT6plex) 4 Q8BVQ9 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=1 SV=1 Q3UIH5; Q3U5V3; Q8BVQ9; P46471 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=1 SV=1; 26S proteasome regulatory subunit 7 OS=Mus musculus OX=10090 GN=Psmc2 PE=1 SV=5 0 2 2 0.361 0 1 1 1 490.77188 980.53649 980.53626 0.23 0.00011 0/0 0 0 33622668 HCD 30 MS2 8.655948 714.5 41.48 38.0263 8908 8908 8905 QEplus033719.raw F4 786 605.1 747 673.5 731.7 743.5 111 2.41 1 FALSE 0.001607 0.02554 0.241 -250 28964 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLVAEGHR [R].gLVAEGHR.[L] N-Term(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 2 2 0.5 0 1 1 1 534.31219 1067.61711 1067.61591 1.13 0.0006 0/0 0 0 21868678 HCD 30 MS2 31.90606 973.4 84.586 38.0285 8909 8909 8905 QEplus033719.raw F4 979.8 826.7 1040.7 801 1128.8 1063.3 150 2.88 1 FALSE 1.14E-05 0.0001689 0.813 -250 28973 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQEDLAR [K].eQEDLAR.[G] N-Term(TMT6plex) 2 A0A0R4J0T8 ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Arfgap3 PE=1 SV=1 A0A0R4J0T8; Q9D8S3 ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Arfgap3 PE=1 SV=1; ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Arfgap3 PE=1 SV=2 0 2 2 0.3563 0 1 1 1 545.29034 1089.57341 1089.57377 -0.33 -0.00018 0/0 0 0 12710263 HCD 30 MS2 4.716671 765.6 110 38.031 8910 8910 8905 QEplus033719.raw F4 798.6 611.9 781.7 615.8 969.9 815.8 156 2.47 1 FALSE 0.001615 0.02604 0.238 -250 28985 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAVECCPNCR [K].gAVEccPNcR.[G] N-Term(TMT6plex); C5(Carbamidomethyl); C6(Carbamidomethyl); C9(Carbamidomethyl) 4 P63037 DnaJ homolog subfamily A member 1 OS=Mus musculus OX=10090 GN=Dnaja1 PE=1 SV=1 P63037; Q3TK61; B1AXY1; B1AXY0 DnaJ homolog subfamily A member 1 OS=Mus musculus OX=10090 GN=Dnaja1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja1 PE=2 SV=1; DnaJ homolog subfamily A member 1 (Fragment) OS=Mus musculus OX=10090 GN=Dnaja1 PE=1 SV=1; DnaJ homolog subfamily A member 1 (Fragment) OS=Mus musculus OX=10090 GN=Dnaja1 PE=1 SV=1 0 2 2 0.9289 0 1 1 1 726.32452 1451.64177 1451.63911 1.84 0.00133 0/0 0 0 7046055 HCD 30 MS2 6.474134 282.6 110 38.036 8912 8912 8905 QEplus033719.raw F4 290.4 255.4 306.9 207.3 322.5 313.1 10 3.8 1 FALSE 1.14E-05 1.92E-05 0.994 -250 28989 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRGDYDGIGGRGDR [R].gRGDYDGIGGRGDR.[S] N-Term(TMT6plex) 3 B9EKE9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1 B9EKE9; B7ZWF1; Q3TQX5 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=1 2 4 4 0.4762 0 1 1 1 420.71628 1679.84328 1679.84111 1.29 0.00054 0/0 0 0 46613656 HCD 30 MS2 45.6182 319.9 31.876 38.0383 8913 8913 8905 QEplus033719.raw F4 536.2 190.5 290.4 326.7 326.1 249.4 167 1.89 1 FALSE 0.001736 0.02932 0.22 -250 28994 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTEDKQDADDQENGSGER [R].qTEDkQDADDQENGSGER.[N] N-Term(TMT6plex); K5(TMT6plex) 3 Q8CI11 Guanine nucleotide-binding protein-like 3 OS=Mus musculus OX=10090 GN=Gnl3 PE=1 SV=2 A0A2I3BR32; Q8CI11; Q3TK27 Guanine nucleotide-binding protein-like 3 (Fragment) OS=Mus musculus OX=10090 GN=Gnl3 PE=1 SV=1; Guanine nucleotide-binding protein-like 3 OS=Mus musculus OX=10090 GN=Gnl3 PE=1 SV=2; Guanine nucleotide-binding protein-like 3 OS=Mus musculus OX=10090 GN=Gnl3 PE=2 SV=1 1 3 3 0.7146 0 1 1 1 827.39301 2480.16446 2480.15374 4.32 0.00358 0/0 0 0 3134405.5 HCD 30 MS2 0 135.9 110 38.0408 8914 8914 8905 QEplus033719.raw F4 127.4 132.4 173.3 93.6 143.6 145 123 4.45 1 FALSE 1.14E-05 4.85E-15 2.816 -250 29003 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLADHAR [R].vLADHAR.[T] N-Term(TMT6plex) 4 Q6XMP4 Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1 Q6XMP4; Q8BGQ7; Q3TZ32; Q3UD67 "Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1" 0 2 2 0.3498 0 1 1 1 505.80081 1010.59435 1010.59444 -0.1 -0.00005 0/0 0 0 4980433 HCD 30 MS2 54.05789 738 110 38.0433 8915 8915 8905 QEplus033719.raw F4 750.5 568.7 781.2 690.6 882.2 754.9 112 2.23 1 FALSE 0.0009075 0.01246 0.367 -250 29013 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MFGGSGTSSRPSSNR [R].mFGGSGTSSRPSSNR.[S] N-Term(TMT6plex); M1(Oxidation) 8 Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; A2AKJ2; Q3U6S1; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 3 3 0.6106 0 1 1 1 591.62341 1772.85569 1772.85471 0.55 0.00032 0/0 0 0 20160818 HCD 30 MS2 14.40444 401.4 110 38.0506 8917 8917 8916 QEplus033719.raw F4 409.8 398.6 482.9 272.6 467.6 376.9 99 2.26 1 FALSE 1.14E-05 0.000147 0.825 -250 29017 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRIPVNNR [K].gRIPVNNR.[F] N-Term(TMT6plex) 2 O08749 "Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Dld PE=1 SV=2" O08749; Q3TIE8 "Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Dld PE=1 SV=2; Dihydrolipoyl dehydrogenase OS=Mus musculus OX=10090 GN=Dld PE=2 SV=1" 1 3 3 0.542 0 1 1 1 385.57019 1154.69602 1154.69556 0.4 0.00015 0/0 0 0 105141712 HCD 30 MS2 30.01955 295.4 10.738 38.0551 8919 8919 8916 QEplus033719.raw F4 429.2 219.2 290.9 296.5 235.3 301.5 94 2.62 1 FALSE 0.001506 0.02264 0.26 -250 29050 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLTHENVQR [R].qLTHENVQR.[K] N-Term(TMT6plex) 1 Q9D554 Splicing factor 3A subunit 3 OS=Mus musculus OX=10090 GN=Sf3a3 PE=1 SV=2 Q9D554 Splicing factor 3A subunit 3 OS=Mus musculus OX=10090 GN=Sf3a3 PE=1 SV=2 0 3 3 0.63 0 1 1 1 451.91998 1353.7454 1353.74363 1.31 0.00059 0/0 0 0 11475744 HCD 30 MS2 27.23854 450.6 98.408 38.071 8926 8926 8916 QEplus033719.raw F4 506.1 385.2 469.2 362.1 538.3 442.8 316 5 1 FALSE 1.14E-05 2.69E-08 1.536 -250 29056 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDAANNYAR [K].eDAANNYAR.[G] N-Term(TMT6plex) 12 P68369; Q52L87; A0A0A0MQA5 Tubulin alpha-1A chain OS=Mus musculus OX=10090 GN=Tuba1a PE=1 SV=1;Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=1 SV=1;Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1 A0A087WRB4; Q5FW91; Q3TIZ0; Q9JJZ2; A0A2R8VHF3; P68369; P05213; A0A087WQS4; Q52L87; A0A0A0MQA5; O89052; P68368 Tubulin alpha-4A chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba3a PE=1 SV=1; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=2 SV=1; Tubulin alpha-8 chain OS=Mus musculus OX=10090 GN=Tuba8 PE=1 SV=1; Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Gm49450 PE=3 SV=1; Tubulin alpha-1A chain OS=Mus musculus OX=10090 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Mus musculus OX=10090 GN=Tuba1b PE=1 SV=2; Tubulin alpha-4A chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=1 SV=1; Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1; Alpha-tubulin (Fragment) OS=Mus musculus OX=10090 GN=Tuba1b PE=2 SV=1; Tubulin alpha-4A chain OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1 0 2 2 0.7107 0 1 1 1 626.81049 1252.6137 1252.61194 1.4 0.00088 0/0 0 0 15697440 HCD 30 MS2 8.727111 503.7 110 38.0808 8929 8929 8927 QEplus033719.raw F4 481.4 413.5 529.8 445.4 617.6 534.8 108 3.18 3 FALSE 1.14E-05 3.94E-06 1.124 -250 29069 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGERPSLR [R].eGERPSLR.[L] N-Term(TMT6plex) 1 Q99JX4 Eukaryotic translation initiation factor 3 subunit M OS=Mus musculus OX=10090 GN=Eif3m PE=1 SV=1 Q99JX4 Eukaryotic translation initiation factor 3 subunit M OS=Mus musculus OX=10090 GN=Eif3m PE=1 SV=1 0 3 3 0.3826 0 1 1 1 391.5578 1172.65885 1172.6585 0.3 0.00012 0/0 0 0 16402665 HCD 30 MS2 39.96769 481.5 52.026 38.0856 8931 8931 8927 QEplus033719.raw F4 528.2 383.8 539.8 428.7 523.9 484.4 315 2.98 1 FALSE 0.0002019 0.004137 0.523 -250 29080 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGQGGAGAGDDEEED [K].kGQGGAGAGDDEEED.[-] N-Term(TMT6plex); K1(TMT6plex) 1 Q6ZWN5 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3 Q6ZWN5 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3 1 3 3 0.8716 0 1 1 1 631.63452 1892.88901 1892.8874 0.85 0.00054 0/0 0 0 8214490.5 HCD 30 MS2 0 294.9 110 38.0903 8933 8933 8927 QEplus033719.raw F4 309.5 269.4 288.8 245.4 362.3 293.9 70 4.44 1 FALSE 1.14E-05 3.37E-10 1.897 -250 29085 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARAEEAEAQKR [R].aRAEEAEAQkR.[Q] N-Term(TMT6plex); K10(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 2 3 3 0.5822 0 1 1 1 572.9967 1716.97556 1716.9757 -0.08 -0.00005 0/0 0 0 8718163 HCD 30 MS2 13.28001 291.5 110 38.0928 8934 8934 8927 QEplus033719.raw F4 291.6 254.3 288.6 305.4 330.8 278.3 478 3.04 2 FALSE 1.14E-05 1.91E-08 1.564 -250 29091 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DPDVTER [K].dPDVTER.[R] N-Term(TMT6plex) 8 E9Q3Z5 Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1 E9Q3Z5; E3VVQ8; A1A5A1; Q8K4L2; Q8K4L3; Q8K4L3-3; A0A1B0GS91; Q8C9L0 Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin muscle-specific isoform OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1; Svil protein OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1; Archvillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Isoform 2 of Supervillin OS=Mus musculus OX=10090 GN=Svil; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Svil protein OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1 0 2 2 0.3827 0 1 1 1 530.77777 1060.54827 1060.54722 0.99 0.00052 0/0 0 0 7786686.5 HCD 30 MS2 29.02048 483.7 110 38.0953 8935 8935 8927 QEplus033719.raw F4 545.6 338.6 507.4 423.9 507.5 579.4 148 2.43 1 FALSE 0.0001707 0.003866 0.531 -250 29098 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGQGGAGAGDDEEED [K].kGQGGAGAGDDEEED.[-] N-Term(TMT6plex); K1(TMT6plex) 1 Q6ZWN5 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3 Q6ZWN5 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3 1 2 2 0.8333 0 1 1 1 946.9494 1892.89153 1892.8874 2.18 0.00206 0/0 0 0 6086291 HCD 30 MS2 0 292.1 110 38.0979 8936 8936 8927 QEplus033719.raw F4 309 263.6 294.9 234.7 347.6 302.8 69 3.18 1 FALSE 1.14E-05 9.42E-10 1.812 -250 29104 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEEEAEVR [K].tEEEAEVR.[E] N-Term(TMT6plex) 2 Q3TUQ5 Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=1 Q3TUQ5; O35691 Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=1; Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=4 0 2 2 0.5876 0 1 1 1 596.30725 1191.60723 1191.60546 1.48 0.00088 0/0 0 0 6508751 HCD 30 MS2 46.81928 496.6 110 38.1004 8937 8937 8927 QEplus033719.raw F4 527.2 446.3 531.9 417.5 537.2 519.7 171 2.91 1 FALSE 1.14E-05 0.0001145 0.846 -250 29117 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDSSQEAEAQANCR [K].tDSSQEAEAQANcR.[V] N-Term(TMT6plex); C13(Carbamidomethyl) 2 A2RRJ4 Exportin 5 OS=Mus musculus OX=10090 GN=Xpo5 PE=2 SV=1 A2RRJ4; Q924C1 Exportin 5 OS=Mus musculus OX=10090 GN=Xpo5 PE=2 SV=1; Exportin-5 OS=Mus musculus OX=10090 GN=Xpo5 PE=1 SV=1 0 3 3 0.8376 0 1 1 1 599.2746 1795.80924 1795.80782 0.79 0.00047 0/0 0 0 7399944 HCD 30 MS2 7.699221 97.6 110 38.1102 8940 8940 8938 QEplus033719.raw F4 109.3 70.8 98 74.7 114 118.6 19 5.42 1 FALSE 1.14E-05 5.05E-09 1.674 -250 29125 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LATCSSDR [R].lATcSSDR.[S] N-Term(TMT6plex); C4(Carbamidomethyl) 1 Q9D1M0 Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3 Q9D1M0 Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3 0 2 2 0.7055 0 1 1 1 569.79059 1138.5739 1138.57239 1.33 0.00076 0/0 0 0 90167696 HCD 30 MS2 5.588602 478.1 17.037 38.1124 8941 8941 8938 QEplus033719.raw F4 454.4 405 520.9 380.5 637.7 470.3 95 3.09 1 FALSE 1.14E-05 0.0005533 0.714 -250 29133 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEEAPGHRPTTNPNASK [K].hEEAPGHRPTTNPNASk.[F] N-Term(TMT6plex); K17(TMT6plex) 1 P97315 Cysteine and glycine-rich protein 1 OS=Mus musculus OX=10090 GN=Csrp1 PE=1 SV=3 P97315 Cysteine and glycine-rich protein 1 OS=Mus musculus OX=10090 GN=Csrp1 PE=1 SV=3 0 5 5 0.6259 0 1 1 1 461.04868 2301.21427 2301.21001 1.85 0.00085 0/0 0 0 50955688 HCD 30 MS2 10.85876 310.6 20.751 38.1147 8942 8942 8938 QEplus033719.raw F4 335.1 295 362.1 207.8 399.9 263.8 386 5.4 1 FALSE 1.14E-05 1.19E-05 1.033 -250 29145 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVCEQR [K].mVcEQR.[L] N-Term(TMT6plex); C3(Carbamidomethyl) 1 P22935 Cellular retinoic acid-binding protein 2 OS=Mus musculus OX=10090 GN=Crabp2 PE=2 SV=2 P22935 Cellular retinoic acid-binding protein 2 OS=Mus musculus OX=10090 GN=Crabp2 PE=2 SV=2 0 2 2 0.381 0 1 1 1 526.26556 1051.52385 1051.5226 1.19 0.00062 0/0 0 0 28409928 HCD 30 MS2 27.4787 883.5 68.884 38.1192 8944 8944 8938 QEplus033719.raw F4 880.1 384.1 978.7 1261.3 478.6 1318 114 2.31 1 FALSE 0.003278 0.0638 0.104 -250 29158 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESNVQEVR [K].eSNVQEVR.[C] N-Term(TMT6plex) 4 P62715; P63330 Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Mus musculus OX=10090 GN=Ppp2cb PE=1 SV=1;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Mus musculus OX=10090 GN=Ppp2ca PE=1 SV=1 P62715; Q8BN07; Q8VED4; P63330 Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Mus musculus OX=10090 GN=Ppp2cb PE=1 SV=1; Serine/threonine-protein phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Mus musculus OX=10090 GN=Ppp2ca PE=1 SV=1 0 2 2 0.424 0 1 1 1 595.32257 1189.63786 1189.63743 0.36 0.00022 0/0 0 0 8781231 HCD 30 MS2 32.26038 511.6 110 38.124 8946 8946 8938 QEplus033719.raw F4 565.4 428.8 525.7 400.4 622.5 526.6 265 2.83 2 FALSE 1.14E-05 0.0001012 0.856 -250 29165 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPAGPGTADSQRPR [R].tPAGPGTADSQRPR.[E] N-Term(TMT6plex) 4 B9EJ77 Tanc1 protein OS=Mus musculus OX=10090 GN=Tanc1 PE=2 SV=1 B9EJ77; E9QAF9; Q0VGY8-2; Q0VGY8 Tanc1 protein OS=Mus musculus OX=10090 GN=Tanc1 PE=2 SV=1; Protein TANC1 OS=Mus musculus OX=10090 GN=Tanc1 PE=1 SV=1; Isoform 2 of Protein TANC1 OS=Mus musculus OX=10090 GN=Tanc1; Protein TANC1 OS=Mus musculus OX=10090 GN=Tanc1 PE=1 SV=2 0 3 3 0.5934 0 1 1 1 547.29523 1639.87113 1639.87135 -0.13 -0.00007 0/0 0 0 8134647 HCD 30 MS2 35.84905 320 110 38.1265 8947 8947 8938 QEplus033719.raw F4 312.8 282.8 363.2 263.2 375.4 322.9 342 4.55 1 FALSE 1.14E-05 2.44E-15 2.873 -250 29175 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASSIEAR [K].aSSIEAR.[Q] N-Term(TMT6plex) 1 P57759 Endoplasmic reticulum resident protein 29 OS=Mus musculus OX=10090 GN=Erp29 PE=1 SV=2 P57759 Endoplasmic reticulum resident protein 29 OS=Mus musculus OX=10090 GN=Erp29 PE=1 SV=2 0 2 2 0.2 0 1 1 1 481.77689 962.5465 962.54683 -0.34 -0.00017 0/0 0 0 65820860 HCD 30 MS2 18.93565 509.8 13.951 38.1386 8951 8951 8949 QEplus033719.raw F4 528.4 403.7 533.2 484.9 606.1 502.3 127 2.45 1 FALSE 0.001787 0.03081 0.212 -250 29182 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMDPSCTR [R].sMDPScTR.[S] N-Term(TMT6plex); C6(Carbamidomethyl) 1 Q0VE46 Myadm protein OS=Mus musculus OX=10090 GN=Myadm PE=1 SV=1 Q0VE46 Myadm protein OS=Mus musculus OX=10090 GN=Myadm PE=1 SV=1 0 2 2 0.6385 0 1 1 1 591.77631 1182.54534 1182.54446 0.74 0.00044 0/0 0 0 36698284 HCD 30 MS2 16.9446 521.4 40.881 38.1408 8952 8952 8949 QEplus033719.raw F4 481.7 513 602.4 392.9 555 583.1 30 2.96 1 FALSE 0.0009259 0.01272 0.363 -250 29188 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEEAPGHRPTTNPNASK [K].hEEAPGHRPTTNPNASk.[F] N-Term(TMT6plex); K17(TMT6plex) 1 P97315 Cysteine and glycine-rich protein 1 OS=Mus musculus OX=10090 GN=Csrp1 PE=1 SV=3 P97315 Cysteine and glycine-rich protein 1 OS=Mus musculus OX=10090 GN=Csrp1 PE=1 SV=3 0 4 4 0.6549 0 1 1 1 576.05853 2301.2123 2301.21001 0.99 0.00057 0/0 0 0 27611790 HCD 30 MS2 27.57211 311.5 59.858 38.1431 8953 8953 8949 QEplus033719.raw F4 322.1 308.1 342.3 210.6 412.8 273 390 4.26 1 FALSE 1.14E-05 1.24E-06 1.219 -250 29193 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDTAAAAVR [K].sDTAAAAVR.[Q] N-Term(TMT6plex) 2 A0A1S6GWH5 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1 A0A1S6GWH5; Q02053 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1; Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus OX=10090 GN=Uba1 PE=1 SV=1 0 2 2 0.4164 0 1 1 1 545.80859 1090.60991 1090.6054 4.13 0.00225 0/0 0 0 17063584 HCD 30 MS2 41.75438 671.1 46.274 38.1476 8955 8955 8949 QEplus033719.raw F4 727.6 552.6 688.5 559.3 783.8 714.9 210 2.93 1 FALSE 1.14E-05 8.79E-07 1.248 -250 29208 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGSSGGVIR [R].dGSSGGVIR.[L] N-Term(TMT6plex) 1 Q60692 Proteasome subunit beta type-6 OS=Mus musculus OX=10090 GN=Psmb6 PE=1 SV=3 Q60692 Proteasome subunit beta type-6 OS=Mus musculus OX=10090 GN=Psmb6 PE=1 SV=3 0 2 2 0.5079 0 1 1 1 538.80017 1076.59307 1076.58975 3.08 0.00166 0/0 0 0 12263810 HCD 30 MS2 15.90272 950.5 110 38.1526 8957 8957 8949 QEplus033719.raw F4 1000.9 841.5 998.1 769.9 1084.3 1008.4 260 3.15 1 FALSE 1.14E-05 2.50E-06 1.162 -250 29221 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAVECCPNCR [K].gAVEccPNcR.[G] N-Term(TMT6plex); C5(Carbamidomethyl); C6(Carbamidomethyl); C9(Carbamidomethyl) 4 P63037 DnaJ homolog subfamily A member 1 OS=Mus musculus OX=10090 GN=Dnaja1 PE=1 SV=1 P63037; Q3TK61; B1AXY1; B1AXY0 DnaJ homolog subfamily A member 1 OS=Mus musculus OX=10090 GN=Dnaja1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja1 PE=2 SV=1; DnaJ homolog subfamily A member 1 (Fragment) OS=Mus musculus OX=10090 GN=Dnaja1 PE=1 SV=1; DnaJ homolog subfamily A member 1 (Fragment) OS=Mus musculus OX=10090 GN=Dnaja1 PE=1 SV=1 0 3 3 0.8859 0 1 1 1 484.55145 1451.6398 1451.63911 0.48 0.00023 0/0 0 0 8025272 HCD 30 MS2 50.52721 462.4 110 38.1576 8959 8959 8949 QEplus033719.raw F4 615.1 231.5 339.1 641.1 539.5 408.3 10 3.33 1 FALSE 1.14E-05 0.0006693 0.697 -250 29248 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLRDEGLR [R].hLRDEGLR.[L] N-Term(TMT6plex) 2 Q9WV55 Vesicle-associated membrane protein-associated protein A OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=2 Q9WV55; A0A3B2W837 Vesicle-associated membrane protein-associated protein A OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=2; Vesicle-associated membrane protein-associated protein A (Fragment) OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=1 1 3 3 0.4085 0 1 1 1 408.90567 1224.70246 1224.70103 1.16 0.00047 0/0 0 0 37680884 HCD 30 MS2 42.31296 403.8 21.489 38.1719 8964 8964 8960 QEplus033719.raw F4 438.7 323.3 448.9 405.7 355 450.9 298 3.06 1 FALSE 0.0008718 0.01212 0.371 -250 29264 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MFGGSGTSSR [R].mFGGSGTSSR.[S] N-Term(TMT6plex); M1(Oxidation) 1 Q3TWV0 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 Q3TWV0 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 0 2 2 0.6453 0 1 1 1 616.30188 1231.59648 1231.59385 2.14 0.00132 0/0 0 0 6901453.5 HCD 30 MS2 57.00964 408 110 38.1767 8966 8966 8960 QEplus033719.raw F4 380.3 352.7 468.6 319.2 472.9 454.5 29 1.72 1 FALSE 0.009335 0.1745 -0.112 -250 29272 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTEQER [K].lTEQER.[S] N-Term(TMT6plex) 4 Q6ZPU9 KIF-binding protein OS=Mus musculus OX=10090 GN=Kifbp PE=1 SV=2 E0CXN7; Q6ZPU9; Q6ZPU9-2; H3BIY2 KIF-binding protein OS=Mus musculus OX=10090 GN=Kifbp PE=1 SV=1; KIF-binding protein OS=Mus musculus OX=10090 GN=Kifbp PE=1 SV=2; Isoform 2 of KIF-binding protein OS=Mus musculus OX=10090 GN=Kifbp; KIF-binding protein OS=Mus musculus OX=10090 GN=Kifbp PE=1 SV=1 0 2 2 0.1797 0 1 1 1 502.78281 1004.55834 1004.55739 0.94 0.00047 0/0 0 0 6513741 HCD 30 MS2 34.21194 550.8 110 38.1792 8967 8967 8960 QEplus033719.raw F4 584.5 435.9 577.5 448.3 713.7 544.8 218 2.17 1 FALSE 0.001702 0.02809 0.226 -250 29281 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLRDEGLR [R].hLRDEGLR.[L] N-Term(TMT6plex) 2 Q9WV55 Vesicle-associated membrane protein-associated protein A OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=2 Q9WV55; A0A3B2W837 Vesicle-associated membrane protein-associated protein A OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=2; Vesicle-associated membrane protein-associated protein A (Fragment) OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=1 1 2 2 0.5647 0 1 1 1 612.85443 1224.70159 1224.70103 0.45 0.00028 0/0 0 0 5880785 HCD 30 MS2 29.752 256.6 110 38.1817 8968 8968 8960 QEplus033719.raw F4 266.3 167.4 300 287.3 194.1 324.8 325 2.78 1 FALSE 1.14E-05 0.0001231 0.84 -250 29294 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLTHENVQR [R].qLTHENVQR.[K] N-Term(TMT6plex) 1 Q9D554 Splicing factor 3A subunit 3 OS=Mus musculus OX=10090 GN=Sf3a3 PE=1 SV=2 Q9D554 Splicing factor 3A subunit 3 OS=Mus musculus OX=10090 GN=Sf3a3 PE=1 SV=2 0 2 2 0.6147 0 1 1 1 677.37732 1353.74736 1353.74363 2.76 0.00187 0/0 0 0 3194524.25 HCD 30 MS2 13.68785 146.3 110 38.1867 8970 8970 8960 QEplus033719.raw F4 147.5 134 163.8 107.5 177.8 147 314 3.4 1 FALSE 1.14E-05 4.76E-06 1.109 -250 29303 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDSSQEAEAQANCR [K].tDSSQEAEAQANcR.[V] N-Term(TMT6plex); C13(Carbamidomethyl) 2 A2RRJ4 Exportin 5 OS=Mus musculus OX=10090 GN=Xpo5 PE=2 SV=1 A2RRJ4; Q924C1 Exportin 5 OS=Mus musculus OX=10090 GN=Xpo5 PE=2 SV=1; Exportin-5 OS=Mus musculus OX=10090 GN=Xpo5 PE=1 SV=1 0 2 2 0.9011 0 1 1 1 898.40967 1795.81206 1795.80782 2.36 0.00212 0/0 0 0 1622937.125 HCD 30 MS2 0 63.4 110 38.194 8972 8972 8971 QEplus033719.raw F4 69.8 57.1 66.3 47.9 83.7 55.8 20 4.65 1 FALSE 1.14E-05 7.06E-13 2.405 -250 29309 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQEESIDAR [K].nQEESIDAR.[A] N-Term(TMT6plex) 1 Q9JJ28 Protein flightless-1 homolog OS=Mus musculus OX=10090 GN=Flii PE=1 SV=1 Q9JJ28 Protein flightless-1 homolog OS=Mus musculus OX=10090 GN=Flii PE=1 SV=1 0 2 2 0.5772 0 1 1 1 645.82874 1290.65019 1290.64872 1.14 0.00074 0/0 0 0 13725045 HCD 30 MS2 2.522124 478.8 110 38.1966 8973 8973 8971 QEplus033719.raw F4 496.2 422.2 512.3 374.8 559.9 507.1 119 3.24 1 FALSE 1.14E-05 8.40E-05 0.872 -250 29321 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REPLPSR [R].rEPLPSR.[R] N-Term(TMT6plex) 6 Q9WV02; Q91VM5 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1;RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" A2AFI3; Q9WV02-2; A0A2I3BRL8; Q9WV02; Q91VM5; S4R1F6 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; Isoform 2 of RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx; Predicted gene 7324 OS=Mus musculus OX=10090 GN=Gm7324 PE=4 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1" 1 3 3 0.1217 0 1 1 1 361.88745 1083.6478 1083.64721 0.55 0.0002 0/0 0 0 27286994 HCD 30 MS2 12.50344 321.7 43.819 38.2011 8975 8975 8971 QEplus033719.raw F4 361 289 358.6 260.9 372.3 288.2 96 2.63 2 FALSE 0.002056 0.03731 0.185 -250 29344 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHVLLHR [K].gHVLLHR.[T] N-Term(TMT6plex) 3 Q9CWS0 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Mus musculus OX=10090 GN=Ddah1 PE=1 SV=3" D3YU15; Q9CWS0; Q3UF01 "Dimethylargininase OS=Mus musculus OX=10090 GN=Ddah1 PE=1 SV=1; N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Mus musculus OX=10090 GN=Ddah1 PE=1 SV=3; Dimethylargininase (Fragment) OS=Mus musculus OX=10090 GN=Ddah1 PE=2 SV=1" 0 3 3 0.5 0 1 1 1 354.22479 1060.65982 1060.65771 1.99 0.0007 0/0 0 0 12831384 HCD 30 MS2 35.95718 309.2 108.927 38.208 8978 8978 8971 QEplus033719.raw F4 391.9 216.1 330.2 267.2 326.6 323.1 92 3.26 1 FALSE 1.14E-05 0.0002684 0.775 -250 29354 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YGGGGYGR [R].yGGGGYGR.[R] N-Term(TMT6plex) 2 Q8C671 Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=2 SV=1 Q8C671; Q62093 Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=2 SV=1; Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=1 SV=4 0 2 2 0.5324 0 1 1 1 508.26157 1015.51586 1015.51586 0 0 0/0 0 0 9771132 HCD 30 MS2 35.94624 1084 110 38.2105 8979 8979 8971 QEplus033719.raw F4 1057 1070.4 1220.2 863.6 1179.4 1113.7 49 2.16 1 FALSE 0.0008899 0.01235 0.368 -250 29361 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLEAAQQHR [K].dLEAAQQHR.[S] N-Term(TMT6plex) 1 Q99LJ0 CTTNBP2 N-terminal-like protein OS=Mus musculus OX=10090 GN=Cttnbp2nl PE=1 SV=1 Q99LJ0 CTTNBP2 N-terminal-like protein OS=Mus musculus OX=10090 GN=Cttnbp2nl PE=1 SV=1 0 3 3 0.4827 0 1 1 1 432.90079 1296.68781 1296.68578 1.57 0.00068 0/0 0 0 9706199 HCD 30 MS2 53.17738 740 110 38.213 8980 8980 8971 QEplus033719.raw F4 908.5 554.3 756.9 688.5 833.4 698.4 274 3.75 1 FALSE 1.14E-05 0.0002567 0.779 -250 29367 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASDPESGVAR [K].aSDPESGVAR.[G] N-Term(TMT6plex) 2 Q9D0R4 Probable ATP-dependent RNA helicase DDX56 OS=Mus musculus OX=10090 GN=Ddx56 PE=2 SV=1 Q9D0R4; Q8BK66 Probable ATP-dependent RNA helicase DDX56 OS=Mus musculus OX=10090 GN=Ddx56 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx56 PE=2 SV=1 0 2 2 0.6401 0 1 1 1 609.32074 1217.6342 1217.63235 1.53 0.00093 0/0 0 0 7401439.5 HCD 30 MS2 17.60501 371.9 110 38.2155 8981 8981 8971 QEplus033719.raw F4 446.3 303.1 425.6 251.2 368.7 436.2 184 3.64 1 FALSE 1.14E-05 0.0001487 0.824 -250 29373 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHPQPPPAQNQNQVR [K].qHPQPPPAQNQNQVR.[S] N-Term(TMT6plex) 5 Q8CBM0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1 Q8CBM0; Q3TCR9; Q8CD55; Q62523; Q7TQE2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Zyxin OS=Mus musculus OX=10090 GN=Zyx PE=1 SV=2; Zyx protein OS=Mus musculus OX=10090 GN=Zyx PE=1 SV=1 0 3 3 0.747 0 1 1 1 656.68451 1968.03897 1968.03612 1.45 0.00095 0/0 0 0 30583260 HCD 30 MS2 36.23557 288.3 51.233 38.2229 8983 8983 8982 QEplus033719.raw F4 255.5 306.4 397.2 253.3 234.3 282.8 335 4.19 1 FALSE 1.14E-05 1.82E-08 1.568 -250 29379 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEDETEYGCR [K].sEDETEYGcR.[G] N-Term(TMT6plex); C9(Carbamidomethyl) 4 Q9EQG9 Ceramide transfer protein OS=Mus musculus OX=10090 GN=Cert1 PE=1 SV=1 Q9EQG9; Q9EQG9-3; Q8BSX8; Q9EQG9-2 Ceramide transfer protein OS=Mus musculus OX=10090 GN=Cert1 PE=1 SV=1; Isoform 3 of Ceramide transfer protein OS=Mus musculus OX=10090 GN=Cert1; Ceramide transfer protein OS=Mus musculus OX=10090 GN=Cert1 PE=2 SV=1; Isoform 2 of Ceramide transfer protein OS=Mus musculus OX=10090 GN=Cert1 0 2 2 0.7538 0 1 1 1 737.82098 1474.63469 1474.63175 1.99 0.00147 0/0 0 0 5564838 HCD 30 MS2 5.012074 214.3 110 38.2254 8984 8984 8982 QEplus033719.raw F4 201.6 173.6 233.1 204.4 247.8 225.5 9 3.29 1 FALSE 1.14E-05 9.80E-05 0.859 -250 29418 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTEEVQDTDR [K].tTEEVQDTDR.[Q] N-Term(TMT6plex) 3 Q922S5 Os9 protein (Fragment) OS=Mus musculus OX=10090 GN=Os9 PE=2 SV=1 Q922S5; Q8K2C7; Q8K2C7-2 Os9 protein (Fragment) OS=Mus musculus OX=10090 GN=Os9 PE=2 SV=1; Protein OS-9 OS=Mus musculus OX=10090 GN=Os9 PE=1 SV=2; Isoform 2 of Protein OS-9 OS=Mus musculus OX=10090 GN=Os9 0 2 2 0.6364 0 1 1 1 711.85004 1422.6928 1422.69098 1.27 0.00091 0/0 0 0 6855331.5 HCD 30 MS2 0 202 110 38.2414 8991 8991 8982 QEplus033719.raw F4 206.1 173.6 243.8 179.8 180.7 227.9 111 3.41 1 FALSE 1.14E-05 5.11E-06 1.103 -250 29434 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSPTEDDESAK [K].hSPTEDDESAk.[A] N-Term(TMT6plex); K11(TMT6plex) 2 B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 P14873; B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=1 SV=2; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 0 3 3 0.6767 0 1 1 1 558.61926 1673.84323 1673.83826 2.97 0.00166 0/0 0 0 7610366.5 HCD 30 MS2 35.0456 312.8 110 38.2512 8994 8994 8993 QEplus033719.raw F4 396.8 191.5 298.7 298.1 396.1 295.3 165 5.97 1 FALSE 1.14E-05 8.86E-12 2.197 -250 29450 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEIDAR [R].tEIDAR.[A] N-Term(TMT6plex) 9 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; B2RXX6; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.3093 0 1 1 1 467.26382 933.52037 933.52028 0.1 0.00005 0/0 0 0 100377504 HCD 30 MS2 25.20155 542.6 10.208 38.2583 8997 8997 8993 QEplus033719.raw F4 586.3 394.9 565.8 475 624.3 609.1 171 1.94 2 FALSE 0.005838 0.09724 0.014 -250 29481 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYPPPR [R].gYPPPR.[D] N-Term(TMT6plex) 4 Q9WV02; Q91VM5 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1;RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" A0A2I3BRL8; Q9WV02; Q91VM5; S4R1F6 "Predicted gene 7324 OS=Mus musculus OX=10090 GN=Gm7324 PE=4 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1" 0 2 2 0.3282 0 1 1 1 458.26694 915.5266 915.52497 1.78 0.00082 0/0 0 0 18134796 HCD 30 MS2 55.20049 610.5 58.302 38.2794 9005 9005 9004 QEplus033719.raw F4 642.3 529.5 643.5 400.1 883.9 563.6 94 1.95 2 FALSE 0.008351 0.1453 -0.081 -250 29491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGEDGHPGKPGRPGER [K].aGEDGHPGkPGRPGER.[G] N-Term(TMT6plex); K9(TMT6plex) 4 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 E0CXI2; Q3TUE2; Q01149; Q3TU64 Collagen alpha-2(I) chain (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 4 4 0.5889 0 1 1 1 519.53491 2075.11782 2075.11465 1.52 0.00079 0/0 0 0 8577240 HCD 30 MS2 22.26082 385.5 110 38.2819 9006 9006 9004 QEplus033719.raw F4 358.4 418.7 446.5 216.7 521.4 351.3 432 3.43 1 FALSE 3.35E-05 0.001338 0.636 -250 29498 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARAEEAEAQKR [R].aRAEEAEAQkR.[Q] N-Term(TMT6plex); K10(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 2 4 4 0.4 0 1 1 1 429.99954 1716.97634 1716.9757 0.37 0.00016 0/0 0 0 25982402 HCD 30 MS2 78.79215 507.4 27.576 38.2863 9008 9008 9004 QEplus033719.raw F4 544.7 371.7 507.4 527.6 601.3 491.7 474 2.45 2 FALSE 0.0002419 0.004918 0.503 -250 29507 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESTAGDGPSTVSR [R].eSTAGDGPSTVSR.[L] N-Term(TMT6plex) 3 Q91VX2 Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1 Q91VX2; A2AMY5; A2AMY7 Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1; Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1; Ubiquitin-associated protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1 0 3 3 0.5219 0 1 1 1 498.25363 1492.74634 1492.74408 1.51 0.00075 0/0 0 0 4929485.5 HCD 30 MS2 9.044382 230.4 110 38.2913 9010 9010 9004 QEplus033719.raw F4 257.9 188.8 223.6 202.2 259.3 250.4 191 5.02 1 FALSE 1.14E-05 3.94E-08 1.504 -250 29515 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANNVQEVR [R].aNNVQEVR.[R] N-Term(TMT6plex) 7 Q3URM1 ANK_REP_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Clpb PE=1 SV=1 Q3URM1; E9PY58; Q8CCN6; Q3UGS9; Q9DA85; Q3U3U6; Q3TXD4 ANK_REP_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Clpb PE=1 SV=1; Caseinolytic peptidase B protein homolog OS=Mus musculus OX=10090 GN=Clpb PE=1 SV=1; Caseinolytic peptidase B protein homolog OS=Mus musculus OX=10090 GN=Clpb PE=1 SV=1; ANK_REP_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Clpb PE=2 SV=1; ANK_REP_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Clpb PE=2 SV=1; ANK_REP_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Clpb PE=2 SV=1; ANK_REP_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Clpb PE=2 SV=1 0 2 2 0.4777 0 1 1 1 579.82587 1158.64446 1158.64285 1.39 0.0008 0/0 0 0 4464923 HCD 30 MS2 28.80326 299.1 110 38.2939 9011 9011 9004 QEplus033719.raw F4 309.2 227.4 321.3 273.5 305 358.2 292 2.24 1 FALSE 1.14E-05 9.51E-05 0.861 -250 29526 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRVEASGCSR [K].vRVEASGcSR.[R] N-Term(TMT6plex); C8(Carbamidomethyl) 5 A0A1W2P6H1 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2 A0A1W2P6H1; H7BX05; A2AAJ9; E9QQ96; Z4YJE4 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Obscurin OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3 1 2 2 0.5198 0 1 1 1 675.36169 1349.71611 1349.7157 0.31 0.00021 0/0 0 0 3979144.5 HCD 30 MS2 19.24998 135.7 110 38.2989 9013 9013 9004 QEplus033719.raw F4 150.4 82.5 134.9 157.4 101.1 187.7 315 2.02 1 FALSE 0.0006294 0.009345 0.415 -250 29532 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPAPSGGGGASGDLR [R].rPAPSGGGGASGDLR.[A] N-Term(TMT6plex) 3 P23949 mRNA decay activator protein ZFP36L2 OS=Mus musculus OX=10090 GN=Zfp36l2 PE=1 SV=2 Q9EQL7; P23949; Q9EQL8 TIS11D insertion variant (Fragment) OS=Mus musculus OX=10090 GN=Zfp36l2 PE=2 SV=1; mRNA decay activator protein ZFP36L2 OS=Mus musculus OX=10090 GN=Zfp36l2 PE=1 SV=2; TIS11D deletion variant (Fragment) OS=Mus musculus OX=10090 GN=Zfp36l2 PE=2 SV=1 0 3 3 0.7052 0 1 1 1 528.61987 1583.84507 1583.84513 -0.04 -0.00002 0/0 0 0 3946533.25 HCD 30 MS2 48.88806 254.9 110 38.3014 9014 9014 9004 QEplus033719.raw F4 245.1 196.8 285.2 223.5 252.2 326.4 307 4.41 1 FALSE 1.14E-05 2.46E-15 2.872 -250 29538 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADLQTSSQR [K].aDLQTSSQR.[L] N-Term(TMT6plex) 4 Q3TIR1 Trafficking protein particle complex subunit 13 OS=Mus musculus OX=10090 GN=Trappc13 PE=2 SV=1 Q3TIR1-2; Q3TIR1; J3QNW4; Q3TIR1-3 Isoform 2 of Trafficking protein particle complex subunit 13 OS=Mus musculus OX=10090 GN=Trappc13; Trafficking protein particle complex subunit 13 OS=Mus musculus OX=10090 GN=Trappc13 PE=2 SV=1; Trafficking protein particle complex subunit 13 OS=Mus musculus OX=10090 GN=Trappc13 PE=1 SV=1; Isoform 3 of Trafficking protein particle complex subunit 13 OS=Mus musculus OX=10090 GN=Trappc13 0 2 2 0.6495 0 1 1 1 617.83405 1234.66081 1234.65889 1.55 0.00096 0/0 0 0 5581863 HCD 30 MS2 23.30892 294.9 110 38.3087 9016 9016 9015 QEplus033719.raw F4 330.7 247 336.2 220.8 294.1 340.3 259 3.31 1 FALSE 1.14E-05 7.19E-07 1.265 -250 29551 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSPANQR [K].lSPANQR.[K] N-Term(TMT6plex) 2 Q5EBP9 Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 Q5EBP9; Q3UDN8 Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 0 2 2 0.251 0 1 1 1 507.79895 1014.59062 1014.58936 1.25 0.00063 0/0 0 0 54503544 HCD 30 MS2 47.45472 679.6 17.734 38.3135 9018 9018 9015 QEplus033719.raw F4 599 729.8 800.4 495.4 768.1 685 148 2.55 1 FALSE 0.007759 0.1267 -0.054 -250 29561 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRVEASGCSR [K].vRVEASGcSR.[R] N-Term(TMT6plex); C8(Carbamidomethyl) 5 A0A1W2P6H1 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2 A0A1W2P6H1; H7BX05; A2AAJ9; E9QQ96; Z4YJE4 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Obscurin OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3 1 3 3 0.7017 0 1 1 1 450.57697 1349.71634 1349.7157 0.48 0.00021 0/0 0 0 48211360 HCD 30 MS2 9.999109 314.3 31.367 38.3157 9019 9019 9015 QEplus033719.raw F4 353.1 84.4 305 494.3 120.6 528.4 329 4.09 1 FALSE 1.14E-05 4.21E-07 1.309 -250 29584 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSPTGAAGR [K].vSPTGAAGR.[D] N-Term(TMT6plex) 4 Q80U72 Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib PE=1 SV=2 Q80U72-4; Q80U72-2; Q80U72-3; Q80U72 Isoform 4 of Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib; Isoform 2 of Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib; Isoform 3 of Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib; Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib PE=1 SV=2 0 2 2 0.1707 0 1 1 1 522.80414 1044.601 1044.59992 1.03 0.00054 0/0 0 0 20206406 HCD 30 MS2 1.953102 810.6 110 38.3295 9025 9025 9015 QEplus033719.raw F4 799.6 750.6 865.3 647.9 999.1 801.2 289 2.46 1 FALSE 0.001074 0.01396 0.346 -250 29596 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELHSMGR [R].eLHSMGR.[T] N-Term(TMT6plex) 6 B2RUJ2 Erbb2ip protein OS=Mus musculus OX=10090 GN=Erbin PE=1 SV=1 B2RUJ2; B7ZNY4; Q80TH2-2; B7ZNX6; Q80TH2; Q80TH2-1 Erbb2ip protein OS=Mus musculus OX=10090 GN=Erbin PE=1 SV=1; Erbb2ip protein OS=Mus musculus OX=10090 GN=Erbin PE=2 SV=1; Isoform 2 of Erbin OS=Mus musculus OX=10090 GN=Erbin; Erbb2ip protein OS=Mus musculus OX=10090 GN=Erbin PE=1 SV=1; Erbin OS=Mus musculus OX=10090 GN=Erbin PE=1 SV=3; Isoform 1 of Erbin OS=Mus musculus OX=10090 GN=Erbin 0 3 3 0.3194 0 1 1 1 353.52554 1058.56208 1058.56143 0.61 0.00022 0/0 0 0 7666752 HCD 30 MS2 22.8402 336.7 110 38.3393 9028 9028 9026 QEplus033719.raw F4 477.4 213.7 348.9 258.5 400.6 321.3 108 2.88 1 FALSE 0.0008899 0.01232 0.369 -250 29601 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VANYQR [R].vANYQR.[D] N-Term(TMT6plex) 7 Q3TVZ1 Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1 Q8C6E3; P24270; Q3UF58; Q91XI2; Q3UZE7; Q3TVZ1; Q542K4 Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1; Catalase OS=Mus musculus OX=10090 GN=Cat PE=1 SV=4; Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1; Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1; Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1; Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1; Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1 0 2 2 0.3884 0 1 1 1 490.27991 979.55254 979.55225 0.3 0.00015 0/0 0 0 21808280 HCD 30 MS2 35.82884 925.4 76.985 38.3415 9029 9029 9026 QEplus033719.raw F4 875.8 902.1 1009 797.3 1109.4 858.8 89 2.24 1 FALSE 0.003448 0.06639 0.097 -250 29610 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPHTATLR [K].tPHTATLR.[D] N-Term(TMT6plex) 1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 0 3 3 0.5053 0 1 1 1 375.89102 1125.65851 1125.65777 0.66 0.00025 0/0 0 0 13848401 HCD 30 MS2 17.38578 503.6 68.946 38.3438 9030 9030 9026 QEplus033719.raw F4 704.1 377.5 526.9 370.6 537.8 504.9 154 2.83 1 FALSE 0.00171 0.0287 0.223 -250 29633 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYAVQSGR [K].sYAVQSGR.[W] N-Term(TMT6plex) 3 E9PZQ0 Ryanodine receptor 1 OS=Mus musculus OX=10090 GN=Ryr1 PE=1 SV=1 E9PZQ0; A0A1L1SQG7; K3W4M2 Ryanodine receptor 1 OS=Mus musculus OX=10090 GN=Ryr1 PE=1 SV=1; Ryanodine receptor 1 OS=Mus musculus OX=10090 GN=Ryr1 PE=1 SV=1; Ryanodine receptor 1 OS=Mus musculus OX=10090 GN=Ryr1 PE=1 SV=1 0 2 2 0.3019 0 1 1 1 548.80145 1096.59563 1096.59484 0.72 0.0004 0/0 0 0 6373192.5 HCD 30 MS2 0 524.4 110 38.3508 9033 9033 9026 QEplus033719.raw F4 599.1 225.4 438.3 872.2 359.3 652.4 147 2.12 1 FALSE 5.44E-05 0.001847 0.606 -250 29642 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIEESAR [K].eIEESAR.[C] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.562 0 1 1 1 531.78619 1062.56511 1062.56287 2.11 0.00112 0/0 0 0 5382101.5 HCD 30 MS2 45.66888 573.4 110 38.3533 9034 9034 9026 QEplus033719.raw F4 662.4 276.2 448.8 856.8 439.2 757.1 236 2.74 2 FALSE 5.44E-05 0.002068 0.595 -250 29648 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDSPSCEYSR [K].tDSPScEYSR.[F] N-Term(TMT6plex); C6(Carbamidomethyl) 2 A2RRJ4 Exportin 5 OS=Mus musculus OX=10090 GN=Xpo5 PE=2 SV=1 A2RRJ4; Q924C1 Exportin 5 OS=Mus musculus OX=10090 GN=Xpo5 PE=2 SV=1; Exportin-5 OS=Mus musculus OX=10090 GN=Xpo5 PE=1 SV=1 0 2 2 0.8674 0 1 1 1 715.82556 1430.64385 1430.64192 1.34 0.00096 0/0 0 0 3984728.5 HCD 30 MS2 0 191.9 110 38.3558 9035 9035 9026 QEplus033719.raw F4 168.4 190.4 223.2 136.5 248.1 184.6 22 3.77 1 FALSE 1.14E-05 0.0002764 0.772 -250 29654 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGMTEEAQR [R].aGMTEEAQR.[L] N-Term(TMT6plex) 4 Q8BH74 Nuclear pore complex protein Nup107 OS=Mus musculus OX=10090 GN=Nup107 PE=1 SV=1 Q8BH74; Q3TT06; Q569X8; E9Q4V9 Nuclear pore complex protein Nup107 OS=Mus musculus OX=10090 GN=Nup107 PE=1 SV=1; Nuclear pore complex protein OS=Mus musculus OX=10090 GN=Nup107 PE=2 SV=1; Nuclear pore complex protein OS=Mus musculus OX=10090 GN=Nup107 PE=2 SV=1; Nuclear pore complex protein OS=Mus musculus OX=10090 GN=Nup107 PE=1 SV=1 0 2 2 0.6346 0 1 1 1 611.3075 1221.60771 1221.6095 -1.46 -0.00089 0/0 0 0 4328201.5 HCD 30 MS2 14.79224 400.7 110 38.3583 9036 9036 9026 QEplus033719.raw F4 393 385.2 449.7 317 455.3 404.1 111 3.53 1 FALSE 1.14E-05 1.12E-06 1.228 -250 29663 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLDHLQR [K].rLDHLQR.[A] N-Term(TMT6plex) 1 Q61249 Immunoglobulin-binding protein 1 OS=Mus musculus OX=10090 GN=Igbp1 PE=1 SV=1 Q61249 Immunoglobulin-binding protein 1 OS=Mus musculus OX=10090 GN=Igbp1 PE=1 SV=1 1 2 2 0.2704 0 1 1 1 583.85211 1166.69695 1166.69556 1.19 0.0007 0/0 0 0 1352745 HCD 30 MS2 71.21292 164.8 110 38.3656 9038 9038 9037 QEplus033719.raw F4 160.3 132.6 175 139.8 196 185.1 179 2.33 1 FALSE 5.44E-05 0.002107 0.593 -250 29672 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPHTATLR [K].tPHTATLR.[D] N-Term(TMT6plex) 1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 0 2 2 0.5204 0 1 1 1 563.33411 1125.66094 1125.65777 2.81 0.00158 0/0 0 0 5059112 HCD 30 MS2 29.59072 398.6 110 38.3681 9039 9039 9037 QEplus033719.raw F4 652.9 300 346.1 303.5 409.9 379 140 1.96 1 FALSE 0.001702 0.02793 0.227 -250 29678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTVQMR [K].qTVQMR.[A] N-Term(TMT6plex) 4 Q99LI8 Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=2 Q99LI8; Q3UMA3; Q3TLL4; F6VV02 Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=2; Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=1; Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=2 SV=1; Hepatocyte growth factor-regulated tyrosine kinase substrate (Fragment) OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=2 0 2 2 0.098 0 1 1 1 496.28183 991.55638 991.55562 0.77 0.00038 0/0 0 0 23840968 HCD 30 MS2 12.03934 822.6 78.036 38.3704 9040 9040 9037 QEplus033719.raw F4 974.6 631.4 826.5 722.1 863 918.2 168 2.04 1 FALSE 0.002662 0.053 0.133 -250 29688 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DECPEVR [K].dEcPEVR.[L] N-Term(TMT6plex); C3(Carbamidomethyl) 10 Q76MZ3 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=3 Q7TMX2; H3BKU1; Q8C2E1; Q3TTF6; H3BIV7; H3BLE7; Q76MZ3; Q8BIX1; Q7TNP2; G3UWS4 "Protein phosphatase 2 (Formerly 2A), regulatory subunit A (PR 65), alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppp2r1a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppp2r1b PE=2 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=2; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1" 0 2 2 0.5782 0 1 1 1 567.27728 1133.54729 1133.54584 1.28 0.00072 0/0 0 0 14532741 HCD 30 MS2 29.83634 742.5 110 38.3729 9041 9041 9037 QEplus033719.raw F4 913.7 596 782.4 588.1 814.1 760.5 57 2.75 1 FALSE 0.001607 0.02526 0.243 -250 29696 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCPFHR [K].gcPFHR.[I] N-Term(TMT6plex); C2(Carbamidomethyl) 3 Q9CR16 Peptidyl-prolyl cis-trans isomerase D OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=3 A0A0A6YW70; Q9CR16; Q3UB60 Peptidyl-prolyl cis-trans isomerase D (Fragment) OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase D OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppid PE=2 SV=1 0 2 2 0.4402 0 1 1 1 501.76102 1002.51476 1002.51409 0.67 0.00034 0/0 0 0 12980110 HCD 30 MS2 19.97568 807.7 110 38.3754 9042 9042 9037 QEplus033719.raw F4 869.9 629.5 816.2 606.3 1065.3 859.1 70 1.84 1 FALSE 0.009204 0.1688 -0.107 -250 29710 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDGTETVCTER [R].nDGTETVcTER.[D] N-Term(TMT6plex); C8(Carbamidomethyl) 2 Q3UI98 Uncharacterized protein OS=Mus musculus OX=10090 GN=Gtf3c5 PE=2 SV=1 Q3UI98; Q8R2T8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Gtf3c5 PE=2 SV=1; General transcription factor 3C polypeptide 5 OS=Mus musculus OX=10090 GN=Gtf3c5 PE=2 SV=2 0 2 2 0.7397 0 1 1 1 755.8551 1510.70293 1510.7005 1.61 0.00121 0/0 0 0 3412215.25 HCD 30 MS2 9.87428 94.4 110 38.3804 9044 9044 9037 QEplus033719.raw F4 101.5 81.6 100.7 68.4 119.1 95.3 43 3.88 1 FALSE 1.14E-05 1.67E-07 1.385 -250 29715 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGEDGHPGKPGRPGER [K].aGEDGHPGkPGRPGER.[G] N-Term(TMT6plex); K9(TMT6plex) 4 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 E0CXI2; Q3TUE2; Q01149; Q3TU64 Collagen alpha-2(I) chain (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 5 5 0.5863 0 1 1 1 415.82886 2075.11518 2075.11465 0.25 0.00011 0/0 0 0 40446020 HCD 30 MS2 29.68909 397.6 35.838 38.3827 9045 9045 9037 QEplus033719.raw F4 354.8 452.7 485.4 197.2 530.2 365.4 412 2.49 1 FALSE 0.0002019 0.004028 0.526 -250 29727 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDEMLR [R].rDEMLR.[M] N-Term(TMT6plex) 17 P39053 Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=2 P39053; P39053-3; F6RRH9; E9QLL2; F6TH70; A0A0J9YUN4; P39053-4; F2Z460; Q8BZ98; F6W8Z8; E0CXZ8; Q8BZ98-2; A0A0J9YUS0; Q8BUT2; A0A0J9YUE9; P39053-5; P39053-6 Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=2; Isoform 3 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1; Dynamin-1 (Fragment) OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm3 PE=1 SV=1; Dynamin-1 (Fragment) OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=1; Isoform 4 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1; Dynamin-3 OS=Mus musculus OX=10090 GN=Dnm3 PE=1 SV=1; Dynamin-3 OS=Mus musculus OX=10090 GN=Dnm3 PE=1 SV=1; Dynamin-1 (Fragment) OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=1; Dynamin-3 OS=Mus musculus OX=10090 GN=Dnm3 PE=1 SV=1; Isoform 2 of Dynamin-3 OS=Mus musculus OX=10090 GN=Dnm3; Dynamin-1 (Fragment) OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm3 PE=2 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=1; Isoform 5 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1; Isoform 6 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1 1 3 3 0.3467 0 1 1 1 350.19736 1048.57752 1048.57708 0.42 0.00015 0/0 0 0 13734702 HCD 30 MS2 28.39978 339.3 85.78 38.3872 9047 9047 9037 QEplus033719.raw F4 413.4 277.2 354.7 253.6 343.5 393.2 229 3 1 FALSE 0.001185 0.01624 0.318 -250 29736 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVLTGSADNSCR [K].hVLTGSADNScR.[L] N-Term(TMT6plex); C11(Carbamidomethyl) 3 Q9QZD9 Eukaryotic translation initiation factor 3 subunit I OS=Mus musculus OX=10090 GN=Eif3i PE=1 SV=1 Q9QZD9; Q3T9Y8; A2AE03 Eukaryotic translation initiation factor 3 subunit I OS=Mus musculus OX=10090 GN=Eif3i PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit I OS=Mus musculus OX=10090 GN=Eif3i PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit I (Fragment) OS=Mus musculus OX=10090 GN=Eif3i PE=1 SV=1 0 2 2 0.7254 0 1 1 1 773.38599 1545.7647 1545.76411 0.38 0.0003 0/0 0 0 4621991 HCD 30 MS2 0 112.4 110 38.397 9050 9050 9048 QEplus033719.raw F4 122.8 109.3 114 103 143 82 124 3.46 1 FALSE 1.14E-05 9.82E-11 1.998 -250 29743 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGTLVAER [R].rGTLVAER.[E] N-Term(TMT6plex) 2 Q9WUM3 Coronin-1B OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1 A0A494B9Y4; Q9WUM3 Coronin (Fragment) OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1; Coronin-1B OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1 1 3 3 0.5941 0 1 1 1 377.56665 1130.6854 1130.68432 0.95 0.00036 0/0 0 0 66117704 HCD 30 MS2 18.69922 258.4 16.044 38.4038 9053 9053 9048 QEplus033719.raw F4 323.6 219.1 294.6 197.4 272.8 242.8 322 3.4 1 FALSE 1.14E-05 8.94E-06 1.057 -250 29749 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADSEWRR [K].aDSEWRR.[C] N-Term(TMT6plex) 7 Q8C483 Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1 A2AFS1; Q3U8N1; Q8C483; P26638; Q3U6F6; Q8CEH3; A2AFS0 "Seryl-aminoacyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Sars PE=1 SV=8; Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=2 SV=1; Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1; Serine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Sars1 PE=1 SV=3; Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=2 SV=1; Seryl_tRNA_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sars PE=2 SV=1; Seryl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1" 1 3 3 0.3915 0 1 1 1 383.539 1148.60245 1148.60099 1.28 0.00049 0/0 0 0 53665124 HCD 30 MS2 24.35299 373.4 21.752 38.406 9054 9054 9048 QEplus033719.raw F4 381.2 318.7 402.2 328 428.5 381.9 238 2.81 1 FALSE 0.001169 0.0157 0.324 -250 29754 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQTDFEHR [K].dQTDFEHR.[I] N-Term(TMT6plex) 4 P47857 "ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=3" P47857-3; P47857; Q99K08; P47857-2 "Isoform 3 of ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm; ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=3; ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkm PE=2 SV=1; Isoform 2 of ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm" 0 3 3 0.6881 0 1 1 1 426.20923 1276.61313 1276.61194 0.93 0.0004 0/0 0 0 29758330 HCD 30 MS2 13.91032 296.5 40.89 38.4083 9055 9055 9048 QEplus033719.raw F4 347.7 146.9 276.8 421.3 207.8 378.7 64 4.04 1 FALSE 1.14E-05 1.21E-05 1.031 -250 29759 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADAEEEAATR [R].aDAEEEAATR.[I] N-Term(TMT6plex) 8 A2BFF8 Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1 A2BFF8; D6Q0F6; Q3TPJ8; D6Q0F5; D6Q0F7; A2BFF9; A2BFF5; A2BFF7 Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1; Cytoplasmic dynein intermediate chain 2 isoform 2.2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=2 SV=1; Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1; Cytoplasmic dynein intermediate chain 2 isoform 2.1 OS=Mus musculus OX=10090 GN=Dync1i2 PE=2 SV=1; Cytoplasmic dynein intermediate chain 2 isoform 2.5 OS=Mus musculus OX=10090 GN=Dync1i2 PE=2 SV=1; Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1; Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1; Dynein cytoplasmic 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1 0 2 2 0.4465 0 1 1 1 646.32068 1291.63408 1291.63274 1.04 0.00067 0/0 0 0 15688532 HCD 30 MS2 35.30426 644 110 38.4108 9056 9056 9048 QEplus033719.raw F4 691 519.2 701.7 567.4 692.9 691.7 85 3.27 1 FALSE 1.14E-05 1.78E-07 1.38 -250 29769 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIANQQSR [K].vIANQQSR.[L] N-Term(TMT6plex) 6 Q542P4 55 kDa erythrocyte membrane protein OS=Mus musculus OX=10090 GN=Mpp1 PE=1 SV=1 Q542P4; Q684Q6; A2AN84; B7ZCL8; B7ZCM0; Q3THA8 55 kDa erythrocyte membrane protein OS=Mus musculus OX=10090 GN=Mpp1 PE=1 SV=1; 55 kDa erythrocyte membrane protein (Fragment) OS=Mus musculus OX=10090 GN=Mpp1 PE=2 SV=1; 55 kDa erythrocyte membrane protein OS=Mus musculus OX=10090 GN=Mpp1 PE=1 SV=1; 55 kDa erythrocyte membrane protein OS=Mus musculus OX=10090 GN=Mpp1 PE=1 SV=1; 55 kDa erythrocyte membrane protein (Fragment) OS=Mus musculus OX=10090 GN=Mpp1 PE=1 SV=1; PDZ domain-containing protein OS=Mus musculus OX=10090 GN=Mpp1 PE=2 SV=1 0 2 2 0.523 0 1 1 1 572.83661 1144.66594 1144.66359 2.06 0.00118 0/0 0 0 10504556 HCD 30 MS2 20.95207 574.9 110 38.4158 9058 9058 9048 QEplus033719.raw F4 559.7 598.5 616.3 394.8 757.6 522.3 318 2.83 1 FALSE 1.14E-05 5.63E-05 0.905 -250 29784 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENEGCLQDR [R].eNEGcLQDR.[T] N-Term(TMT6plex); C5(Carbamidomethyl) 3 Q6P1H6 Ankyrin repeat and LEM domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ankle2 PE=1 SV=2 Q6P1H6; Q6P1H6-3; Q6P1H6-2 Ankyrin repeat and LEM domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ankle2 PE=1 SV=2; Isoform 3 of Ankyrin repeat and LEM domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ankle2; Isoform 2 of Ankyrin repeat and LEM domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ankle2 0 2 2 0.5333 0 1 1 1 675.31952 1349.63176 1349.63169 0.05 0.00003 0/0 0 0 3974889.5 HCD 30 MS2 35.53716 206 110 38.4256 9061 9061 9059 QEplus033719.raw F4 250.6 135.4 203.8 219.3 190.7 236.4 48 3.15 1 FALSE 1.14E-05 2.78E-05 0.963 -250 29806 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQTDFEHR [K].dQTDFEHR.[I] N-Term(TMT6plex) 4 P47857 "ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=3" P47857-3; P47857; Q99K08; P47857-2 "Isoform 3 of ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm; ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=3; ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkm PE=2 SV=1; Isoform 2 of ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm" 0 2 2 0.6688 0 1 1 1 638.81097 1276.61467 1276.61194 2.14 0.00136 0/0 0 0 5791703 HCD 30 MS2 26.34332 406.9 110 38.4372 9066 9066 9059 QEplus033719.raw F4 431.8 197.1 343.3 645.7 260.2 563.6 71 3.14 1 FALSE 1.14E-05 0.0002138 0.794 -250 29813 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQGAGGQNMR [R].vQGAGGQNMR.[D] N-Term(TMT6plex) 5 Q3V3N5 Nucleolar GTP-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gnl2 PE=2 SV=1 Q3V3N5; Q99LH1; B1ASC2; P70410; Q3UJL0 Nucleolar GTP-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gnl2 PE=2 SV=1; Nucleolar GTP-binding protein 2 OS=Mus musculus OX=10090 GN=Gnl2 PE=1 SV=2; Nucleolar GTP-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gnl2 PE=1 SV=1; Nucleolar GTP-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gnl2 PE=2 SV=1; Nucleolar GTP-binding protein 2 OS=Mus musculus OX=10090 GN=Gnl2 PE=2 SV=1 0 2 2 0.5975 0 1 1 1 623.83014 1246.653 1246.65237 0.51 0.00032 0/0 0 0 4516842 HCD 30 MS2 9.394135 271.3 110 38.4397 9067 9067 9059 QEplus033719.raw F4 287.9 224.3 274 190.4 338.5 312.9 237 3.18 1 FALSE 1.14E-05 2.23E-07 1.361 -250 29841 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGDFQR [K].eGDFQR.[M] N-Term(TMT6plex) 5 Q3UGT1 Carnitine O-palmitoyltransferase OS=Mus musculus OX=10090 GN=Cpt1a PE=2 SV=1 Q3UGT1; A8ASF5; Q7TQD5; A0A494BAD3; A0A494BAC7 Carnitine O-palmitoyltransferase OS=Mus musculus OX=10090 GN=Cpt1a PE=2 SV=1; Carnitine O-palmitoyltransferase OS=Mus musculus OX=10090 GN=Cpt1a PE=2 SV=1; Carnitine O-palmitoyltransferase OS=Mus musculus OX=10090 GN=Cpt1a PE=1 SV=1; Carnitine O-palmitoyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Cpt1a PE=1 SV=1; Carnitine O-palmitoyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Cpt1a PE=1 SV=1 0 2 2 0.4527 0 1 1 1 490.75424 980.50121 980.49988 1.36 0.00067 0/0 0 0 6956768 HCD 30 MS2 42.77135 791.2 110 38.4517 9071 9071 9070 QEplus033719.raw F4 750 740.4 886.4 631 942.4 796.8 99 2.43 1 FALSE 0.002981 0.05789 0.12 -250 29855 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELAQTTR [K].eLAQTTR.[T] N-Term(TMT6plex) 8 Q6A0F1 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1 Q9CS06; H3BKR8; Q8BVY8; Q3UKQ2; Q6A0F1; H3BL49; P42932; Q9WVS5 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; T-complex protein 1 subunit theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1; T-complex protein 1 subunit theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=3; CCT-theta OS=Mus musculus OX=10090 GN=Cctq PE=3 SV=1 0 2 2 0.5956 0 1 1 1 524.30383 1047.60039 1047.59959 0.76 0.0004 0/0 0 0 34377480 HCD 30 MS2 13.26923 830.6 58.176 38.4588 9074 9074 9070 QEplus033719.raw F4 949.7 648.9 850.4 672.8 934.8 926.7 247 2.72 1 FALSE 0.001335 0.01852 0.294 -250 29860 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDTGEPMGR [R].tDTGEPMGR.[G] N-Term(TMT6plex) 9 P07901 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4 Q3TKB9; P07901; B7ZC50; Q3TKA2; Q3UIF3; A0PJ91; Q8C2A9; Q3TKG0; Q8C5U3 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Heat shock protein HSP 90-alpha (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 0 2 2 0.5699 0 1 1 1 596.79541 1192.58354 1192.58295 0.5 0.0003 0/0 0 0 33617776 HCD 30 MS2 10.62932 648.2 55.601 38.461 9075 9075 9070 QEplus033719.raw F4 683.6 646.2 695.1 422.8 829.8 612 102 2.79 1 FALSE 1.14E-05 2.28E-05 0.979 -250 29876 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQVPVDEAR [R].rQVPVDEAR.[G] N-Term(TMT6plex) 3 Q9JIW9 Ras-related protein Ral-B OS=Mus musculus OX=10090 GN=Ralb PE=1 SV=1 Q9JIW9; Q8CCG5; F6QC68 Ras-related protein Ral-B OS=Mus musculus OX=10090 GN=Ralb PE=1 SV=1; Small monomeric GTPase OS=Mus musculus OX=10090 GN=Ralb PE=2 SV=1; Small monomeric GTPase (Fragment) OS=Mus musculus OX=10090 GN=Ralb PE=1 SV=2 1 3 3 0.5219 0 1 1 1 433.58456 1298.73914 1298.73781 1.02 0.00044 0/0 0 0 18207722 HCD 30 MS2 29.07442 410.2 53.351 38.4656 9077 9077 9070 QEplus033719.raw F4 387.8 339.3 439.7 334.1 518.8 441.3 334 4.33 1 FALSE 1.14E-05 1.75E-10 1.951 -250 29889 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDDLTR [R].cDDLTR.[R] N-Term(TMT6plex); C1(Carbamidomethyl) 4 Q501J6 Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1 Q3TU25; Q501J6; Q3U741; Q501J6-2 RNA helicase OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; Isoform 2 of Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 0 2 2 0.2944 0 1 1 1 504.75311 1008.49895 1008.49816 0.78 0.00039 0/0 0 0 12891037 HCD 30 MS2 25.12796 734.3 110 38.4703 9079 9079 9070 QEplus033719.raw F4 752.9 681.1 784.5 541.1 923.5 722.6 87 1.8 1 FALSE 0.00557 0.09396 0.023 -250 29895 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGENFR [K].tGENFR.[L] N-Term(TMT6plex) 4 P62702 "40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2" V9GWY0; Q545F8; P62702; Q3UXQ6 "40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Gm15013 PE=3 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1; 40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1" 0 2 2 0.369 0 1 1 1 476.75702 952.50676 952.50496 1.89 0.0009 0/0 0 0 12069264 HCD 30 MS2 37.87622 774.9 110 38.4728 9080 9080 9070 QEplus033719.raw F4 783.5 555.4 807.7 605.7 934.2 962.7 55 1.87 1 FALSE 0.003304 0.06413 0.103 -250 29918 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATTASQAK [K].aTTASQAk.[A] N-Term(TMT6plex); K8(TMT6plex) 7 Q3TWG9; A0A140LHR4 Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1;Serpin H1 (Fragment) OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=1 A0A140LHK0; Q8BVU9; Q3TWG9; Q8BV87; Q3TMD2; A0A140LHR4; P19324 Serpin H1 (Fragment) OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Serpin H1 (Fragment) OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=1; Serpin H1 OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=3 0 2 2 0.4799 0 1 1 1 618.37134 1235.7354 1235.73597 -0.46 -0.00029 0/0 0 0 5715374.5 HCD 30 MS2 40.95742 467.1 110 38.4874 9085 9085 9081 QEplus033719.raw F4 669.9 226.8 462.1 301 415.8 727 375 2.98 2 FALSE 1.14E-05 8.02E-05 0.875 -250 29953 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQESGYYDR [R].sQESGYYDR.[M] N-Term(TMT6plex) 7 Q6ZQ61 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1 Q6ZQ61; Q4FJT0; A0A494BAZ2; Q3TTX0; Q9R0U5; Q3TZN1; Q5BL18 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matr3 protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin-3 (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin3 OS=Mus musculus OX=10090 PE=4 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin 3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1 0 2 2 0.7103 0 1 1 1 667.315 1333.62273 1333.62217 0.41 0.00028 0/0 0 0 7067119.5 HCD 30 MS2 9.671229 321 110 38.4972 9089 9089 9081 QEplus033719.raw F4 302.7 314 373.5 270.4 368.3 297 26 3.21 1 FALSE 1.14E-05 7.92E-06 1.067 -250 29955 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSVSPSPAAGR [K].sSVSPSPAAGR.[S] N-Term(TMT6plex) 2 Q80U93 Nuclear pore complex protein Nup214 OS=Mus musculus OX=10090 GN=Nup214 PE=1 SV=2 Q8CHS9; Q80U93 Nup214 protein OS=Mus musculus OX=10090 GN=Nup214 PE=2 SV=2; Nuclear pore complex protein Nup214 OS=Mus musculus OX=10090 GN=Nup214 PE=1 SV=2 0 2 2 0.619 0 1 1 1 622.84393 1244.68059 1244.67963 0.77 0.00048 0/0 0 0 6822477.5 HCD 30 MS2 16.98877 259.9 110 38.4997 9090 9090 9081 QEplus033719.raw F4 276.3 241.6 285.4 174.3 312.3 269.8 279 3.57 1 FALSE 1.14E-05 1.01E-05 1.047 -250 29970 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLAAER [R].tLAAER.[H] N-Term(TMT6plex) 11 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" Q3URW8; B9EKJ1; E9Q447; B2RXX6; A3KGU9; Q3V1V5; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.1354 0 1 1 1 445.26855 889.52983 889.53045 -0.69 -0.00031 0/0 0 0 28671118 HCD 30 MS2 28.75259 690 42.891 38.5095 9093 9093 9092 QEplus033719.raw F4 784.8 476.7 739.8 673.5 740.3 725.1 150 1.92 2 FALSE 0.004139 0.07612 0.072 -250 29995 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEAIER [R].tEAIER.[EA] N-Term(TMT6plex) 5 E3SRG8 Mothers against decapentaplegic homolog OS=Mus musculus OX=10090 GN=Smad4 PE=2 SV=1 E3SRG8; E3SRG7; Q811W8; E3SRH0; P97471 Mothers against decapentaplegic homolog OS=Mus musculus OX=10090 GN=Smad4 PE=2 SV=1; Mothers against decapentaplegic homolog OS=Mus musculus OX=10090 GN=Smad4 PE=2 SV=1; Mothers against decapentaplegic homolog OS=Mus musculus OX=10090 GN=Smad4 PE=3 SV=1; Mothers against decapentaplegic homolog OS=Mus musculus OX=10090 GN=Smad4 PE=2 SV=1; Mothers against decapentaplegic homolog 4 OS=Mus musculus OX=10090 GN=Smad4 PE=1 SV=2 0 2 2 0.2227 0 1 1 3 474.27228 947.53728 947.53593 1.43 0.00068 0/0 0 0 16446166 HCD 30 MS2 22.88879 759.5 86.672 38.5165 9096 9096 9092 QEplus033719.raw F4 849.9 628.1 710.4 557.9 1016.5 794.3 175 2.11 1 FALSE 0.00574 0.09637 0.017 -250 29996 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEALER [R].tEALER.[EA] N-Term(TMT6plex) 4 Q9DCD5-2 Isoform 2 of Tight junction-associated protein 1 OS=Mus musculus OX=10090 GN=Tjap1 Q9DCD5-2; Q9DCD5; A0A286YDX8; A0A286YCJ7 Isoform 2 of Tight junction-associated protein 1 OS=Mus musculus OX=10090 GN=Tjap1; Tight junction-associated protein 1 OS=Mus musculus OX=10090 GN=Tjap1 PE=1 SV=2; Tight junction-associated protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Tjap1 PE=1 SV=1; Tight junction-associated protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Tjap1 PE=1 SV=1 0 2 2 0.2227 0 1 2 2 474.27228 947.53728 947.53593 1.43 0.00068 0/0 0 0 16446166 HCD 30 MS2 22.88879 759.5 86.672 38.5165 9096 9096 9092 QEplus033719.raw F4 849.9 628.1 710.4 557.9 1016.5 794.3 175 2.11 2 FALSE 0.00574 0.09637 0.017 -250 30004 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THELLHR [K].tHELLHR.[M] N-Term(TMT6plex) 3 Q9Z1T1 AP-3 complex subunit beta-1 OS=Mus musculus OX=10090 GN=Ap3b1 PE=1 SV=2 Q3TQ07; Q9Z1T1; A0A338P6V5 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ap3b1 PE=2 SV=1; AP-3 complex subunit beta-1 OS=Mus musculus OX=10090 GN=Ap3b1 PE=1 SV=2; AP-3 complex subunit beta-1 (Fragment) OS=Mus musculus OX=10090 GN=Ap3b1 PE=1 SV=1 0 3 3 0.6272 0 1 1 1 378.8905 1134.65696 1134.65811 -1.01 -0.00038 0/0 0 0 12023477 HCD 30 MS2 63.95045 560.7 64.901 38.5188 9097 9097 9092 QEplus033719.raw F4 982.6 409.9 573.2 464.6 454.1 479.6 239 3.97 1 FALSE 1.14E-05 0.0007616 0.686 -250 30009 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITEASQSSR [R].iTEASQSSR.[H] N-Term(TMT6plex) 3 Q8BWZ3 "N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Mus musculus OX=10090 GN=Naa25 PE=1 SV=1" Q8BWZ3-2; Q8BKH5; Q8BWZ3 "Isoform 2 of N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Mus musculus OX=10090 GN=Naa25; Uncharacterized protein OS=Mus musculus OX=10090 GN=Naa25 PE=2 SV=1; N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Mus musculus OX=10090 GN=Naa25 PE=1 SV=1" 0 2 2 0.38 0 1 1 1 604.32611 1207.64495 1207.648 -2.53 -0.00153 0/0 0 0 9384946 HCD 30 MS2 32.62303 617.7 110 38.5213 9098 9098 9092 QEplus033719.raw F4 629.9 513.6 648.5 530 732.3 651.8 208 2.5 1 FALSE 1.14E-05 0.0006848 0.695 -250 30018 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELECSESR [K].eLEcSESR.[L] N-Term(TMT6plex); C4(Carbamidomethyl) 3 Q059P4 Filamin-A-interacting protein 1 OS=Mus musculus OX=10090 GN=Filip1 PE=1 SV=1 Q9CS72; Q059P4; A0A5F8MPD6 Filamin-A-interacting protein 1 OS=Mus musculus OX=10090 GN=Filip1 PE=1 SV=2; Filamin-A-interacting protein 1 OS=Mus musculus OX=10090 GN=Filip1 PE=1 SV=1; Filamin-A-interacting protein 1 OS=Mus musculus OX=10090 GN=Filip1 PE=1 SV=1 0 2 2 0.4582 0 1 1 1 619.79736 1238.58745 1238.58843 -0.79 -0.00049 0/0 0 0 3862520 HCD 30 MS2 34.40928 272.4 110 38.5238 9099 9099 9092 QEplus033719.raw F4 326 129.2 296.1 299.8 162.7 420.8 54 2.75 1 FALSE 3.35E-05 0.001265 0.641 -250 30024 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHMQPTHPIR [K].eHMQPTHPIR.[L] N-Term(TMT6plex) 2 P68510; A8IP69 14-3-3 protein eta OS=Mus musculus OX=10090 GN=Ywhah PE=1 SV=2;14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 P68510; A8IP69 14-3-3 protein eta OS=Mus musculus OX=10090 GN=Ywhah PE=1 SV=2; 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 0 2 2 0.4634 0 1 1 1 737.89349 1474.77971 1474.77863 0.73 0.00054 0/0 0 0 2408728.25 HCD 30 MS2 0 93.4 110 38.5263 9100 9100 9092 QEplus033719.raw F4 96.7 71.5 110.4 85.6 104.2 92.2 254 3.28 2 FALSE 1.14E-05 6.51E-07 1.273 -250 30031 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STPDSENGSIR [K].sTPDSENGSIR.[E] N-Term(TMT6plex) 1 A8C756 Thyroid adenoma-associated protein homolog OS=Mus musculus OX=10090 GN=Thada PE=1 SV=1 A8C756 Thyroid adenoma-associated protein homolog OS=Mus musculus OX=10090 GN=Thada PE=1 SV=1 0 2 2 0.5655 0 1 1 1 696.35199 1391.6967 1391.6964 0.22 0.00015 0/0 0 0 1624926.75 HCD 30 MS2 0 87.1 110 38.5288 9101 9101 9092 QEplus033719.raw F4 240.2 52.3 50.1 50.6 72.8 56.7 142 2.9 1 FALSE 1.14E-05 0.0002137 0.794 -250 30042 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTELAENR [R].nTELAENR.[G] N-Term(TMT6plex) 4 B9EJ77 Tanc1 protein OS=Mus musculus OX=10090 GN=Tanc1 PE=2 SV=1 B9EJ77; E9QAF9; Q0VGY8-2; Q0VGY8 Tanc1 protein OS=Mus musculus OX=10090 GN=Tanc1 PE=2 SV=1; Protein TANC1 OS=Mus musculus OX=10090 GN=Tanc1 PE=1 SV=1; Isoform 2 of Protein TANC1 OS=Mus musculus OX=10090 GN=Tanc1; Protein TANC1 OS=Mus musculus OX=10090 GN=Tanc1 PE=1 SV=2 0 2 2 0.496 0 1 1 1 588.3147 1175.62212 1175.62178 0.29 0.00017 0/0 0 0 9788437 HCD 30 MS2 23.61569 412 110 38.5384 9104 9104 9103 QEplus033719.raw F4 381.9 405.9 487.5 307.3 500.7 388.6 245 2.52 1 FALSE 1.14E-05 0.000138 0.83 -250 30048 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLVAEGHR [R].gLVAEGHR.[L] N-Term(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 3 3 0.4937 0 1 1 1 356.54358 1067.61618 1067.61591 0.26 0.00009 0/0 0 0 4814790 HCD 30 MS2 45.41463 243.3 110 38.5409 9105 9105 9103 QEplus033719.raw F4 294.5 174 246.4 222.5 269 253.3 84 3.16 1 FALSE 1.14E-05 4.39E-05 0.925 -250 30055 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NGDDGEAGKPGRPGER [K].nGDDGEAGkPGRPGER.[G] N-Term(TMT6plex); K9(TMT6plex) 3 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; Q61022; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Alpha-1 type 1 collagen (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 4 4 0.6631 0 1 1 1 518.2735 2070.07216 2070.07285 -0.33 -0.00017 0/0 0 0 62330440 HCD 30 MS2 2.475026 427.8 19.023 38.5431 9106 9106 9103 QEplus033719.raw F4 369.9 491.4 552.3 132.2 586.2 434.8 328 3.71 1 FALSE 1.14E-05 8.95E-11 2.006 -250 30059 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHMQPTHPIR [K].eHMQPTHPIR.[L] N-Term(TMT6plex) 2 P68510; A8IP69 14-3-3 protein eta OS=Mus musculus OX=10090 GN=Ywhah PE=1 SV=2;14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 P68510; A8IP69 14-3-3 protein eta OS=Mus musculus OX=10090 GN=Ywhah PE=1 SV=2; 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 0 4 4 0.5929 0 1 1 1 369.45117 1474.78286 1474.77863 2.86 0.00106 0/0 0 0 56238788 HCD 30 MS2 12.23561 166.6 18.193 38.5454 9107 9107 9103 QEplus033719.raw F4 191.3 126 179.9 132.5 207.3 162.9 280 5.06 2 FALSE 1.14E-05 5.53E-07 1.286 -250 30092 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPEIQR [K].sPEIQR.[A] N-Term(TMT6plex) 2 Q9D8E6 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3 Q9D8E6; Q9CSM5 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3; 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=2 SV=2 0 2 2 0.4592 0 1 1 1 479.78052 958.55376 958.55191 1.93 0.00092 0/0 0 0 72300264 HCD 30 MS2 4.882025 574.3 18.81 38.5718 9117 9117 9114 QEplus033719.raw F4 625 484.9 601.3 460.6 667.6 606.7 252 2.33 1 FALSE 0.004165 0.07628 0.071 -250 30104 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAPEPETQDAR [K].gAPEPETQDAR.[I] N-Term(TMT6plex) 4 A0A1Y7VM56 "NAD-dependent protein deacylase sirtuin-5, mitochondrial OS=Mus musculus OX=10090 GN=Sirt5 PE=1 SV=1" A0A1Y7VM56; Q8K2C6; A0A1Y7VJY8; A0A1Y7VK33 "NAD-dependent protein deacylase sirtuin-5, mitochondrial OS=Mus musculus OX=10090 GN=Sirt5 PE=1 SV=1; NAD-dependent protein deacylase sirtuin-5, mitochondrial OS=Mus musculus OX=10090 GN=Sirt5 PE=1 SV=1; NAD-dependent protein deacylase sirtuin-5, mitochondrial OS=Mus musculus OX=10090 GN=Sirt5 PE=1 SV=1; NAD-dependent protein deacylase sirtuin-5, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Sirt5 PE=1 SV=1" 0 2 2 0.6801 0 1 1 1 700.35522 1399.70317 1399.70149 1.2 0.00084 0/0 0 0 2272620.5 HCD 30 MS2 0 103.8 110 38.5813 9121 9121 9114 QEplus033719.raw F4 99.4 74.2 121.3 109.5 81.3 137.2 121 3.47 1 FALSE 1.14E-05 1.46E-09 1.776 -250 30124 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGQGGAGAGDDEEED [K].kGQGGAGAGDDEEED.[-] N-Term(TMT6plex); K1(TMT6plex) 1 Q6ZWN5 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3 Q6ZWN5 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3 1 3 3 0.8116 0 1 1 1 631.63367 1892.88645 1892.8874 -0.5 -0.00032 0/0 0 0 4463212.5 HCD 30 MS2 22.73698 172.4 110 38.6012 9127 9127 9126 QEplus033719.raw F4 163.9 153.2 189.8 137.8 215.3 174.1 71 3.98 1 FALSE 1.14E-05 6.41E-09 1.654 -250 30131 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAGTDGSDFQHR [R].aAGTDGSDFQHR.[E] N-Term(TMT6plex) 2 Q5XKN4 Protein jagunal homolog 1 OS=Mus musculus OX=10090 GN=Jagn1 PE=1 SV=2 Q5XKN4; A0A0N4SV89 Protein jagunal homolog 1 OS=Mus musculus OX=10090 GN=Jagn1 PE=1 SV=2; Protein jagunal homolog 1 OS=Mus musculus OX=10090 GN=Jagn1 PE=1 SV=1 0 3 3 0.8249 0 1 1 1 497.57809 1490.71973 1490.71853 0.8 0.0004 0/0 0 0 27604246 HCD 30 MS2 19.50409 289.6 49.524 38.606 9129 9129 9126 QEplus033719.raw F4 340.3 224.2 299.7 295.7 284.5 292.9 86 5.71 1 FALSE 1.14E-05 3.52E-11 2.083 -250 30152 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QACETLR [R].qAcETLR.[D] N-Term(TMT6plex); C3(Carbamidomethyl) 3 D3Z600 PTS1-BP OS=Mus musculus OX=10090 GN=Pex5 PE=1 SV=1 D3Z600; O09012-2; O09012 PTS1-BP OS=Mus musculus OX=10090 GN=Pex5 PE=1 SV=1; Isoform 2 of Peroxisomal targeting signal 1 receptor OS=Mus musculus OX=10090 GN=Pex5; Peroxisomal targeting signal 1 receptor OS=Mus musculus OX=10090 GN=Pex5 PE=1 SV=2 0 2 2 0.3825 0 1 1 1 553.79138 1106.57549 1106.58256 -6.39 -0.00354 0/0 0 0 2556067 HCD 30 MS2 43.74983 368.7 110 38.6158 9133 9133 9126 QEplus033719.raw F4 403.8 300 338.9 373.9 451.6 343.8 193 2.17 1 FALSE 0.001506 0.02225 0.263 -250 30175 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGQGGAGAGDDEEED [K].kGQGGAGAGDDEEED.[-] N-Term(TMT6plex); K1(TMT6plex) 1 Q6ZWN5 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3 Q6ZWN5 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3 1 2 2 0.8432 0 1 1 1 946.94818 1892.88909 1892.8874 0.89 0.00084 0/0 0 0 2330749 HCD 30 MS2 0 91.2 110 38.6307 9138 9138 9137 QEplus033719.raw F4 86.7 71.1 95.3 81.3 113.1 99.5 70 2.87 1 FALSE 1.14E-05 2.46E-09 1.733 -250 30180 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMMQDR [R].sMMQDR.[E] N-Term(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q8VDD5; Q8BIE2 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 0 2 2 0.4706 0 1 1 1 498.74417 996.48107 996.4804 0.67 0.00033 0/0 0 0 19615046 HCD 30 MS2 41.14663 707.4 71.266 38.6355 9140 9140 9137 QEplus033719.raw F4 685.1 654.9 775 594.6 805.4 729.6 31 2.21 1 FALSE 0.009052 0.164 -0.102 -250 30202 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GISQEQCEAR [K].gISQEQcEAR.[G] N-Term(TMT6plex); C7(Carbamidomethyl) 2 P70699 Lysosomal alpha-glucosidase OS=Mus musculus OX=10090 GN=Gaa PE=1 SV=2 P70699; A2AFL3 Lysosomal alpha-glucosidase OS=Mus musculus OX=10090 GN=Gaa PE=1 SV=2; Lysosomal alpha-glucosidase OS=Mus musculus OX=10090 GN=Gaa PE=1 SV=1 0 2 2 0.6552 0 1 1 1 703.84821 1406.68913 1406.68954 -0.29 -0.0002 0/0 0 0 5556093.5 HCD 30 MS2 16.77332 251.9 110 38.6448 9144 9144 9137 QEplus033719.raw F4 250.1 224.6 282.8 223.7 263.2 267.3 115 3.48 1 FALSE 1.14E-05 6.12E-08 1.468 -250 30207 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NGDDGEAGKPGRPGER [K].nGDDGEAGkPGRPGER.[G] N-Term(TMT6plex); K9(TMT6plex) 3 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; Q61022; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Alpha-1 type 1 collagen (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 3 3 0.6628 0 1 1 1 690.69666 2070.07541 2070.07285 1.24 0.00085 0/0 0 0 21450398 HCD 30 MS2 44.46506 244.8 110 38.6473 9145 9145 9137 QEplus033719.raw F4 218 278.9 314.5 76.7 323.2 257.3 335 3.47 1 FALSE 1.14E-05 2.01E-05 0.99 -250 30216 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDTAAAAVR [K].sDTAAAAVR.[Q] N-Term(TMT6plex) 2 A0A1S6GWH5 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1 A0A1S6GWH5; Q02053 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1; Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus OX=10090 GN=Uba1 PE=1 SV=1 0 2 2 0.2483 0 1 1 1 545.80658 1090.60588 1090.6054 0.44 0.00024 0/0 0 0 10707516 HCD 30 MS2 11.17501 456.1 110 38.6596 9149 9149 9148 QEplus033719.raw F4 429.7 429.2 455.7 356.1 597.7 468.2 281 3.02 1 FALSE 1.14E-05 3.80E-05 0.937 -250 30228 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TASLNQRPR [R].tASLNQRPR.[T] N-Term(TMT6plex) 15 Q8CBW3 Abl interactor 1 OS=Mus musculus OX=10090 GN=Abi1 PE=1 SV=3 Q8CBW3; B7ZCU4; Q6AXD3; Q8CBW3-3; B7ZCU5; J3QNK8; B7ZCU3; Q8CBW3-5; B7ZCU0; Q3TMI0; Q3UAH6; Q3TJR5; Q3TPY5; Q3UBL3; B7ZCU2 Abl interactor 1 OS=Mus musculus OX=10090 GN=Abi1 PE=1 SV=3; Abl interactor 1 OS=Mus musculus OX=10090 GN=Abi1 PE=1 SV=1; Abi1 protein OS=Mus musculus OX=10090 GN=Abi1 PE=2 SV=1; Isoform 3 of Abl interactor 1 OS=Mus musculus OX=10090 GN=Abi1; Abl interactor 1 OS=Mus musculus OX=10090 GN=Abi1 PE=1 SV=1; Abl interactor 1 OS=Mus musculus OX=10090 GN=Abi1 PE=1 SV=1; Abl interactor 1 OS=Mus musculus OX=10090 GN=Abi1 PE=1 SV=1; Isoform 5 of Abl interactor 1 OS=Mus musculus OX=10090 GN=Abi1; Abl interactor 1 OS=Mus musculus OX=10090 GN=Abi1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abi1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abi1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abi1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abi1 PE=2 SV=1; SH3 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Abl interactor 1 OS=Mus musculus OX=10090 GN=Abi1 PE=1 SV=1 0 3 3 0.5785 0 1 1 1 424.58447 1271.73886 1271.73815 0.56 0.00024 0/0 0 0 19074384 HCD 30 MS2 11.4641 421 70.716 38.6643 9151 9151 9148 QEplus033719.raw F4 469.5 342.8 461.5 314.5 480.4 457.2 377 3.25 1 FALSE 1.14E-05 1.99E-05 0.991 -250 30246 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDDFNNR [R].eDDFNNR.[L] N-Term(TMT6plex) 6 Q3URM1 ANK_REP_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Clpb PE=1 SV=1 Q3URM1; E9PY58; Q8CCN6; Q3UGS9; Q3U3U6; Q3TXD4 ANK_REP_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Clpb PE=1 SV=1; Caseinolytic peptidase B protein homolog OS=Mus musculus OX=10090 GN=Clpb PE=1 SV=1; Caseinolytic peptidase B protein homolog OS=Mus musculus OX=10090 GN=Clpb PE=1 SV=1; ANK_REP_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Clpb PE=2 SV=1; ANK_REP_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Clpb PE=2 SV=1; ANK_REP_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Clpb PE=2 SV=1 0 2 2 0.6726 0 1 1 1 569.77094 1138.53459 1138.53263 1.72 0.00098 0/0 0 0 3497128.25 HCD 30 MS2 64.38929 272.5 110 38.6718 9154 9154 9148 QEplus033719.raw F4 279.7 210.4 262.2 248.8 310.6 323.1 36 2.26 1 FALSE 0.001266 0.01723 0.307 -250 30267 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSVDGVDSGR [K].qSVDGVDSGR.[G] N-Term(TMT6plex) 1 Q8CB77 Elongin-A OS=Mus musculus OX=10090 GN=Eloa PE=1 SV=3 Q8CB77 Elongin-A OS=Mus musculus OX=10090 GN=Eloa PE=1 SV=3 0 2 2 0.6844 0 1 1 1 624.82208 1248.63689 1248.63816 -1.02 -0.00064 0/0 0 0 3911820.25 HCD 30 MS2 0 227.1 110 38.6794 9157 9157 9148 QEplus033719.raw F4 219.9 221.6 257.3 179.6 232.9 251.6 155 3.39 1 FALSE 1.14E-05 8.83E-06 1.058 -250 30298 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVLTGSADNSCR [K].hVLTGSADNScR.[L] N-Term(TMT6plex); C11(Carbamidomethyl) 3 Q9QZD9 Eukaryotic translation initiation factor 3 subunit I OS=Mus musculus OX=10090 GN=Eif3i PE=1 SV=1 Q9QZD9; Q3T9Y8; A2AE03 Eukaryotic translation initiation factor 3 subunit I OS=Mus musculus OX=10090 GN=Eif3i PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit I OS=Mus musculus OX=10090 GN=Eif3i PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit I (Fragment) OS=Mus musculus OX=10090 GN=Eif3i PE=1 SV=1 0 3 3 0.8119 0 1 1 1 515.92712 1545.76682 1545.76411 1.76 0.0009 0/0 0 0 17956954 HCD 30 MS2 11.67505 366.8 101.91 38.701 9165 9165 9159 QEplus033719.raw F4 402.1 294.3 380 363.9 414.2 346.2 139 4.36 1 FALSE 1.14E-05 2.45E-09 1.733 -250 30307 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISAEDR [R].iSAEDR.[SQ] N-Term(TMT6plex) 2 Q8C9S4 Coiled-coil domain-containing protein 186 OS=Mus musculus OX=10090 GN=Ccdc186 PE=1 SV=2 Q8C9S4; F7CUD4 Coiled-coil domain-containing protein 186 OS=Mus musculus OX=10090 GN=Ccdc186 PE=1 SV=2; Coiled-coil domain-containing protein 186 (Fragment) OS=Mus musculus OX=10090 GN=Ccdc186 PE=1 SV=1 0 2 2 0.2026 0 1 1 1 460.2561 919.50493 919.50463 0.33 0.00015 0/0 0 0 17914390 HCD 30 MS2 22.47296 784.3 67.333 38.7032 9166 9166 9159 QEplus033719.raw F4 766 630 851.3 708 858.8 891.6 156 2.27 1 FALSE 0.005324 0.09109 0.031 -250 30308 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSAEDR [R].lSAEDR.[SQ] N-Term(TMT6plex) 3 Q3TDG9 t-SNARE coiled-coil homology domain-containing protein OS=Mus musculus OX=10090 GN=Stx12 PE=2 SV=1 Q3TDG9; Q9ER00; Q3TIL5 t-SNARE coiled-coil homology domain-containing protein OS=Mus musculus OX=10090 GN=Stx12 PE=2 SV=1; Syntaxin-12 OS=Mus musculus OX=10090 GN=Stx12 PE=1 SV=1; t-SNARE coiled-coil homology domain-containing protein OS=Mus musculus OX=10090 GN=Stx12 PE=2 SV=1 0 2 2 0.2026 0 1 2 2 460.2561 919.50493 919.50463 0.33 0.00015 0/0 0 0 17914390 HCD 30 MS2 22.47296 784.3 67.333 38.7032 9166 9166 9159 QEplus033719.raw F4 766 630 851.3 708 858.8 891.6 156 2.27 1 FALSE 0.005324 0.09109 0.031 -250 30318 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GFGDSSAR [K].gFGDSSAR.[I] N-Term(TMT6plex) 1 Q3US17 Zinc finger protein 48 OS=Mus musculus OX=10090 GN=Znf48 PE=1 SV=2 Q3US17 Zinc finger protein 48 OS=Mus musculus OX=10090 GN=Znf48 PE=1 SV=2 0 2 2 0.296 0 1 1 1 513.26569 1025.5241 1025.52134 2.69 0.00138 0/0 0 0 4013374 HCD 30 MS2 22.55958 387.7 110 38.708 9168 9168 9159 QEplus033719.raw F4 376.5 382.3 434.4 250.3 513.8 368.8 87 2.23 1 FALSE 0.0003496 0.006586 0.466 -250 30344 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQAVQEATR [K].mQAVQEATR.[L] N-Term(TMT6plex); M1(Oxidation) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.4515 0 1 1 1 639.83813 1278.66899 1278.66735 1.28 0.00082 0/0 0 0 4310064.5 HCD 30 MS2 0 182.8 110 38.7201 9172 9172 9170 QEplus033719.raw F4 181.8 144.3 190 165.7 185.6 229.6 225 2.06 2 FALSE 5.44E-05 0.002458 0.578 -250 30353 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAQLER [K].tAQLER.[T] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.1811 0 1 1 1 473.7789 946.55052 946.55191 -1.47 -0.00069 0/0 0 0 26397306 HCD 30 MS2 15.47686 731.5 32.522 38.7268 9175 9175 9170 QEplus033719.raw F4 807.9 609.5 722.9 612.5 915.6 720.5 164 2.43 2 FALSE 0.00459 0.08127 0.058 -250 30362 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIAEDSDRK [K].hIAEDSDRk.[Y] N-Term(TMT6plex); K9(TMT6plex) 7 P58774; A2AIM4; P58774-2 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 Q9D1R6; Q91VH3; P58774; A2AIM4; Q3SX28; P58774-2; Q61344 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1 1 4 4 0.4792 0 1 1 1 382.96805 1528.85036 1528.84838 1.3 0.0005 0/0 0 0 4627514.5 HCD 30 MS2 31.87983 430.9 110 38.7293 9176 9176 9170 QEplus033719.raw F4 849.9 174.7 407.4 514.8 260.3 378.3 389 2.65 3 TRUE 0.0008805 0.0122 0.37 -250 30372 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GENCIAAGR [K].gENcIAAGR.[L] N-Term(TMT6plex); C4(Carbamidomethyl) 4 Q8K009 Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=2 Q8CIF2; D3Z6B9; Q8R0Y6; Q8K009 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l1 PE=2 SV=1; Formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=1; Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l1 PE=1 SV=1; Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=2 0 2 2 0.6656 0 1 1 1 588.802 1176.59673 1176.59927 -2.16 -0.00127 0/0 0 0 5001021.5 HCD 30 MS2 42.60543 571.5 110 38.7318 9177 9177 9170 QEplus033719.raw F4 636 496.6 643.3 483.1 563.6 606.5 147 3.26 1 FALSE 1.14E-05 1.80E-06 1.189 -250 30376 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAVSTPAR [K].eAVSTPAR.[A] N-Term(TMT6plex) 5 Q3TNK7 Coiled-coil domain containing 50 OS=Mus musculus OX=10090 GN=Ccdc50 PE=2 SV=1 Q3TNK7; F6UK66; A0A668KL36; Q810U5-3; Q810U5 Coiled-coil domain containing 50 OS=Mus musculus OX=10090 GN=Ccdc50 PE=2 SV=1; Coiled-coil domain-containing protein 50 (Fragment) OS=Mus musculus OX=10090 GN=Ccdc50 PE=1 SV=1; Coiled-coil domain-containing protein 50 OS=Mus musculus OX=10090 GN=Ccdc50 PE=1 SV=1; Isoform 3 of Coiled-coil domain-containing protein 50 OS=Mus musculus OX=10090 GN=Ccdc50; Coiled-coil domain-containing protein 50 OS=Mus musculus OX=10090 GN=Ccdc50 PE=1 SV=1 0 2 2 0.3125 0 1 1 1 530.30365 1059.60002 1059.59959 0.41 0.00022 0/0 0 0 4602025.5 HCD 30 MS2 35.90166 619.2 110 38.7343 9178 9178 9170 QEplus033719.raw F4 668.4 514.3 641.7 528 747.3 615.2 219 1.92 1 FALSE 0.002123 0.03978 0.175 -250 30389 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHPQPPPAQNQNQVR [K].qHPQPPPAQNQNQVR.[S] N-Term(TMT6plex) 5 Q8CBM0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1 Q8CBM0; Q3TCR9; Q8CD55; Q62523; Q7TQE2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Zyxin OS=Mus musculus OX=10090 GN=Zyx PE=1 SV=2; Zyx protein OS=Mus musculus OX=10090 GN=Zyx PE=1 SV=1 0 3 3 0.7751 0 1 1 1 656.68347 1968.03586 1968.03612 -0.13 -0.00009 0/0 0 0 3453696.5 HCD 30 MS2 0 60.6 110 38.7467 9182 9182 9181 QEplus033719.raw F4 65.8 57.7 60.5 49 68 62.7 331 4.89 1 FALSE 1.14E-05 4.89E-10 1.866 -250 30396 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCEECLR [R].scEEcLR.[N] N-Term(TMT6plex); C2(Carbamidomethyl); C5(Carbamidomethyl) 3 Q3U9U7 PSI domain-containing protein OS=Mus musculus OX=10090 GN=Pttg1ip PE=2 SV=1 E0CXB5; Q3U9U7; Q8R143 Pituitary tumor-transforming gene 1 protein-interacting protein (Fragment) OS=Mus musculus OX=10090 GN=Pttg1ip PE=1 SV=1; PSI domain-containing protein OS=Mus musculus OX=10090 GN=Pttg1ip PE=2 SV=1; Pituitary tumor-transforming gene 1 protein-interacting protein OS=Mus musculus OX=10090 GN=Pttg1ip PE=1 SV=1 0 2 2 0.2318 0 1 1 1 591.77771 1182.54814 1182.54446 3.12 0.00184 0/0 0 0 5235967.5 HCD 30 MS2 0 421.5 110 38.7492 9183 9183 9181 QEplus033719.raw F4 391.1 372.3 571.2 351.9 377.7 464.5 34 2.33 1 FALSE 0.002828 0.05542 0.127 -250 30410 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSGIVTR [R].gSGIVTR.[RC] N-Term(TMT6plex) 31 Q3TCR7; P39053; P39054 Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1;Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=2;Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2 Q3TCR7; P39053; P39053-3; P39054; E9QLL2; A0A0J9YUN4; P39053-4; Q9WVP9; P39054-2; A0A338P7J0; B2ZCP4; P09922; G3X9G4; A0A1D8DGT0; F8WIV5; Q3T9X3; A0A338P725; Q8BZ98; Q9CUM4; B2ZCP5; E9Q0J3; Q8BZ98-2; Q61924; Q3UD61; A0A1D8DGT1; Q8BUT2; Q3TBU6; A0A0J9YUE9; P39053-5; G3UZZ3; P39053-6 Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=2; Isoform 3 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1; Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm3 PE=1 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=1; Isoform 4 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1; Interferon-induced GTP-binding protein Mx2 OS=Mus musculus OX=10090 GN=Mx2 PE=2 SV=2; Isoform 2 of Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2; Protein Mx1 OS=Mus musculus OX=10090 GN=Mx1 PE=3 SV=2; Myxovirus influenza virus resistance protein 1 isoform 1 OS=Mus musculus OX=10090 GN=Mx1 PE=2 SV=1; Interferon-induced GTP-binding protein Mx1 OS=Mus musculus OX=10090 GN=Mx1 PE=1 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; MX2 OS=Mus musculus OX=10090 GN=Mx2 PE=2 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Protein Mx1 OS=Mus musculus OX=10090 GN=Mx1 PE=1 SV=2; Dynamin-3 OS=Mus musculus OX=10090 GN=Dnm3 PE=1 SV=1; Dynamin GTPase (Fragment) OS=Mus musculus OX=10090 GN=Dnm2 PE=2 SV=1; Myxovirus influenza virus resistance protein 1 isoform 2 OS=Mus musculus OX=10090 GN=Mx1 PE=2 SV=1; Protein Mx1 OS=Mus musculus OX=10090 GN=Mx1 PE=1 SV=1; Isoform 2 of Dynamin-3 OS=Mus musculus OX=10090 GN=Dnm3; Interferon-induced Mx2 OS=Mus musculus OX=10090 GN=Mx2 PE=2 SV=1; Protein Mx1 OS=Mus musculus OX=10090 GN=Mx1 PE=5 SV=1; MX1 OS=Mus musculus OX=10090 GN=Mx1 PE=2 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm3 PE=2 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=2 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=1; Isoform 5 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1; Dynamin GTPase (Fragment) OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Isoform 6 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1 0 2 2 0.0966 0 1 1 1 459.78265 918.55803 918.557 1.13 0.00052 0/0 0 0 18266544 HCD 30 MS2 44.77714 557.5 48.469 38.7537 9185 9185 9181 QEplus033719.raw F4 575 472.7 602.7 508.8 601.7 584.3 71 1.76 3 FALSE 0.002064 0.03763 0.183 -250 30438 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SFDAHPR [K].sFDAHPR.[RK] N-Term(TMT6plex) 28 B8X349 JNK-interacting leucine zipper protein long form OS=Mus musculus OX=10090 GN=Spag9 PE=2 SV=1 Q9ESN9-5; B8X349; E9PUD1; E9Q6E0; Q3UYC3; Q9ESN9-4; Q8CHB5; Q9ESN9-6; Q8CAB6; Q58A65-3; Q8C7W0; K3W4S4; Q9ESN9-3; Q6PA03; E9Q6B6; A0A0R4J196; Q58A65; Q58A65-6; Q58A65-2; J3QNR6; Q58A65-5; Q6NV54; Q6P1F1; Q58A65-4; Q9ESN9; Q9ESN9-2; F8WH31; Z4YMB8 Isoform 3a of C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3; JNK-interacting leucine zipper protein long form OS=Mus musculus OX=10090 GN=Spag9 PE=2 SV=1; C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=1; C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=2 SV=1; Isoform 1d of C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3; MKIAA1066 protein (Fragment) OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=2 SV=2; Isoform 1e of C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Isoform 3 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; RH2 domain-containing protein OS=Mus musculus OX=10090 GN=Spag9 PE=2 SV=1; C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=1 SV=1; Isoform 1b of C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3; Spag9 protein (Fragment) OS=Mus musculus OX=10090 GN=Spag9 PE=2 SV=1; C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=1 SV=1; C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=1; C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=2; Isoform 6 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; Isoform 2 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=1 SV=1; Isoform 5 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; Mitogen-activated protein kinase 8 interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=2 SV=1; Mapk8ip3 protein OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=2 SV=1; Isoform 4 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=1 SV=1; Isoform 1a of C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3; C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=2; C-Jun-amino-terminal kinase-interacting protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=1 0 3 3 0.4842 0 1 1 1 353.52325 1058.55521 1058.55806 -2.69 -0.00095 0/0 0 0 3005937.25 HCD 30 MS2 69.19688 460.8 110 38.7634 9189 9189 9181 QEplus033719.raw F4 682.7 281.5 477.6 371 450.6 501.2 94 2.85 1 FALSE 0.002586 0.05097 0.139 -250 30454 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEELGAR [R].aEELGAR.[A] N-Term(TMT6plex) 1 Q3TXK9 Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1 Q3TXK9 Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1 0 2 2 0.0293 0 1 1 1 487.77728 974.54729 974.54683 0.48 0.00023 0/0 0 0 26668508 HCD 30 MS2 17.02128 566.8 49.608 38.7755 9193 9193 9192 QEplus033719.raw F4 695.2 364.9 588.9 662.2 478 611.8 261 2.39 1 FALSE 0.004906 0.08592 0.045 -250 30464 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENQEPLR [K].eNQEPLR.[F] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.5556 0 1 1 1 557.80676 1114.60625 1114.6054 0.76 0.00042 0/0 0 0 18760364 HCD 30 MS2 3.231734 441.2 110 38.7803 9195 9195 9192 QEplus033719.raw F4 471.2 213.7 452.3 497.2 288 724.6 147 2.43 1 FALSE 0.0005174 0.008133 0.437 -250 30474 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLEEENAR [K].gLEEENAR.[L] N-Term(TMT6plex) 1 Q3TVI8 Pre-B-cell leukemia transcription factor-interacting protein 1 OS=Mus musculus OX=10090 GN=Pbxip1 PE=1 SV=2 Q3TVI8 Pre-B-cell leukemia transcription factor-interacting protein 1 OS=Mus musculus OX=10090 GN=Pbxip1 PE=1 SV=2 0 2 2 0.316 0 1 1 1 573.80133 1146.59538 1146.59523 0.13 0.00008 0/0 0 0 6355244.5 HCD 30 MS2 29.8227 477.2 110 38.7853 9197 9197 9192 QEplus033719.raw F4 504 278 469.3 584.1 397.3 630.5 183 2.88 1 FALSE 1.14E-05 0.0004896 0.724 -250 30483 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CVAYNNQSNR [R].cVAYNNQSNR.[L] N-Term(TMT6plex); C1(Carbamidomethyl) 2 Q8R2N2 U3 small nucleolar RNA-associated protein 4 homolog OS=Mus musculus OX=10090 GN=Utp4 PE=2 SV=3 Q8R2N2; Q3UJY3 U3 small nucleolar RNA-associated protein 4 homolog OS=Mus musculus OX=10090 GN=Utp4 PE=2 SV=3; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Utp4 PE=2 SV=1 0 2 2 0.5699 0 1 1 1 727.85608 1454.70488 1454.70078 2.82 0.00205 0/0 0 0 2086700.75 HCD 30 MS2 42.12794 93.7 110 38.7878 9198 9198 9192 QEplus033719.raw F4 101.8 82.5 99.4 69.1 102.9 106.5 93 2.79 1 FALSE 1.14E-05 6.57E-07 1.272 -250 30490 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRSEEERTTEAEK [K].dRSEEERTTEAEk.[N] N-Term(TMT6plex); K13(TMT6plex) 2 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q3UF33 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; ERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 2 4 4 0.5435 0 1 1 1 510.26724 2038.04714 2038.0453 0.9 0.00046 0/0 0 0 21191932 HCD 30 MS2 25.52379 601.8 61.11 38.79 9199 9199 9192 QEplus033719.raw F4 763.5 517.6 581.3 401.5 896.5 450.2 307 4.25 1 FALSE 1.14E-05 1.10E-05 1.039 -250 30504 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEGPADPAPQR [R].qEGPADPAPQR.[E] N-Term(TMT6plex) 6 Q8CD14 ATP-dependent RNA helicase DDX54 OS=Mus musculus OX=10090 GN=Ddx54 PE=2 SV=1 Q8CD14; Q8VDG2; Q8CD39; Q7TPP4; Q8K4L0; Q6IQZ1 ATP-dependent RNA helicase DDX54 OS=Mus musculus OX=10090 GN=Ddx54 PE=2 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx54 PE=2 SV=1; ATP-dependent RNA helicase DDX54 OS=Mus musculus OX=10090 GN=Ddx54 PE=2 SV=1; ATP-dependent RNA helicase DDX54 (Fragment) OS=Mus musculus OX=10090 GN=Ddx54 PE=2 SV=1; ATP-dependent RNA helicase DDX54 OS=Mus musculus OX=10090 GN=Ddx54 PE=1 SV=1; ATP-dependent RNA helicase DDX54 (Fragment) OS=Mus musculus OX=10090 GN=Ddx54 PE=2 SV=1 0 2 2 0.7432 0 1 1 1 697.8667 1394.72612 1394.72256 2.56 0.00178 0/0 0 0 3442053 HCD 30 MS2 0 88.2 110 38.7951 9201 9201 9192 QEplus033719.raw F4 91.9 84.2 100.1 64.1 97.5 91.2 228 3.31 1 FALSE 1.14E-05 1.55E-06 1.201 -250 30511 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAGEAAAPEPR [R].sAGEAAAPEPR.[A] N-Term(TMT6plex) 3 Q3UN10 Wolframin OS=Mus musculus OX=10090 GN=Wfs1 PE=1 SV=1 Q3UN10; P56695; Q80UI9 Wolframin OS=Mus musculus OX=10090 GN=Wfs1 PE=1 SV=1; Wolframin OS=Mus musculus OX=10090 GN=Wfs1 PE=1 SV=1; Wolfram syndrome 1 homolog (Human) OS=Mus musculus OX=10090 GN=Wfs1 PE=2 SV=1 0 2 2 0.7295 0 1 1 1 642.84418 1284.68108 1284.67454 5.09 0.00327 0/0 0 0 4718662.5 HCD 30 MS2 9.119977 234.4 110 38.8049 9204 9204 9203 QEplus033719.raw F4 274.8 92 229.8 302.7 145.5 361.4 232 4.03 1 FALSE 1.14E-05 8.39E-09 1.632 -250 30528 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADLENQR [K].aDLENQR.[Q] N-Term(TMT6plex) 1 P10833 Ras-related protein R-Ras OS=Mus musculus OX=10090 GN=Rras PE=1 SV=1 P10833 Ras-related protein R-Ras OS=Mus musculus OX=10090 GN=Rras PE=1 SV=1 0 2 2 0.2455 0 1 1 1 537.79132 1074.57536 1074.5741 1.17 0.00063 0/0 0 0 26531406 HCD 30 MS2 7.020173 701.1 75.151 38.8142 9208 9208 9203 QEplus033719.raw F4 691.5 646.6 755.6 622.1 749.1 741.6 220 2.77 1 FALSE 0.002586 0.05073 0.14 -250 30554 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSMFHNR [R].nSMFHNR.[H] N-Term(TMT6plex) 13 A0A171KXD3 Protein arginine N-methyltransferase 1 OS=Mus musculus OX=10090 GN=Prmt1 PE=1 SV=1 A0A140LJ70; A0A140LI33; Q3TPF5; A0A171KXD3; Q9JIF0-2; Q9JIF0; A0A140LHS4; A0A140LIF7; Q9CX58; Q9JIF0-3; Q8C2D7; Q80WV6; Q80WB1 Protein arginine N-methyltransferase 1 OS=Mus musculus OX=10090 GN=Prmt1 PE=1 SV=1; Protein arginine N-methyltransferase 1 (Fragment) OS=Mus musculus OX=10090 GN=Prmt1 PE=1 SV=2; Methyltransf_25 domain-containing protein OS=Mus musculus OX=10090 GN=Prmt1 PE=2 SV=1; Protein arginine N-methyltransferase 1 OS=Mus musculus OX=10090 GN=Prmt1 PE=1 SV=1; Isoform 2 of Protein arginine N-methyltransferase 1 OS=Mus musculus OX=10090 GN=Prmt1; Protein arginine N-methyltransferase 1 OS=Mus musculus OX=10090 GN=Prmt1 PE=1 SV=1; Protein arginine N-methyltransferase 1 (Fragment) OS=Mus musculus OX=10090 GN=Prmt1 PE=1 SV=1; Protein arginine N-methyltransferase 1 (Fragment) OS=Mus musculus OX=10090 GN=Prmt1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Prmt1 PE=2 SV=1; Isoform 3 of Protein arginine N-methyltransferase 1 OS=Mus musculus OX=10090 GN=Prmt1; Methyltransf_25 domain-containing protein OS=Mus musculus OX=10090 GN=Prmt1 PE=2 SV=1; Prmt1 protein OS=Mus musculus OX=10090 GN=Prmt1 PE=2 SV=1; Prmt1 protein (Fragment) OS=Mus musculus OX=10090 GN=Prmt1 PE=2 SV=1 0 3 3 0.587 0 1 1 1 378.8598 1134.56485 1134.56758 -2.4 -0.00091 0/0 0 0 5493637.5 HCD 30 MS2 0 318.3 110 38.8237 9212 9212 9203 QEplus033719.raw F4 398.3 215.9 292.6 340 390.9 272.1 93 3.22 1 FALSE 0.001108 0.01456 0.338 -250 30560 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDAGQPGEK [K].gDAGQPGEk.[G] N-Term(TMT6plex); K9(TMT6plex) 7 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 2 2 0.37 0 1 1 1 658.86475 1316.72222 1316.72105 0.88 0.00058 0/0 0 0 1943725.25 HCD 30 MS2 0 166.8 110 38.8262 9213 9213 9203 QEplus033719.raw F4 241 147.5 192.9 97.1 123.8 198.6 341 2.27 1 FALSE 0.0008096 0.01115 0.386 -250 30565 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGRPAATEVK [K].rGRPAATEVk.[I] N-Term(TMT6plex); K10(TMT6plex) 4 Q99JF8 PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1 PE=1 SV=1 Q99JF8; Q05CD2; Q99JF8-2; A2BI12 PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1 PE=1 SV=1; Psip1 protein (Fragment) OS=Mus musculus OX=10090 GN=Psip1 PE=2 SV=1; Isoform 2 of PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1; PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1 PE=1 SV=1 1 3 3 0.5771 0 1 1 1 514.98743 1542.94773 1542.94803 -0.2 -0.0001 0/0 0 0 11904412 HCD 30 MS2 4.818679 557.1 110 38.836 9216 9216 9214 QEplus033719.raw F4 527.7 601.9 560.8 377.6 785.5 489 289 2.53 1 FALSE 0.003802 0.07191 0.083 -250 30571 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPEEIRR [R].tPEEIRR.[I] N-Term(TMT6plex) 8 Q7TMN7 Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1 Q7TMN7; S4R1F2; Q9R0V2; D3Z0S1; A0A0N4SV57; P97429; A0A0N4SW89; Q8BSL2 Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin A4 OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=4; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1 1 3 3 0.2686 0 1 1 1 377.2218 1129.65085 1129.65269 -1.62 -0.00061 0/0 0 0 49019348 HCD 30 MS2 8.406185 381.9 22.576 38.8382 9217 9217 9214 QEplus033719.raw F4 385.4 371 448.7 291.7 413.8 380.6 275 3.09 1 FALSE 1.14E-05 5.33E-05 0.909 -250 30587 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEIQAEQDR [R].sEIQAEQDR.[K] N-Term(TMT6plex) 12 Q8CAQ8; A0A0U1RP81 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1;MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q3U7N2; Q8CAQ8; E9QAY6; Q8CAQ8-2; A0A0U1RP81; Q3TVZ5; Q2YDW0; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1 0 2 2 0.5827 0 1 1 1 652.83655 1304.66582 1304.66437 1.11 0.00072 0/0 0 0 10851245 HCD 30 MS2 0 384 110 38.843 9219 9219 9214 QEplus033719.raw F4 375.6 304.2 418.9 412.5 337.6 455.3 155 3.69 2 FALSE 1.14E-05 1.75E-06 1.191 -250 30607 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DANDPVDDR [R].dANDPVDDR.[H] N-Term(TMT6plex) 2 Q91YR7 Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1 Q91YR7; Q91YR7-2 Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1; Isoform 2 of Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 0 2 2 0.7284 0 1 1 1 623.29938 1245.59148 1245.59087 0.48 0.0003 0/0 0 0 8172565 HCD 30 MS2 0 367.8 110 38.8505 9222 9222 9214 QEplus033719.raw F4 383.2 354.2 402 288.1 424.7 354.7 50 4.05 1 FALSE 1.14E-05 2.00E-05 0.99 -250 30614 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTNDNPECR [R].vTNDNPEcR.[L] N-Term(TMT6plex); C8(Carbamidomethyl) 1 Q3TX21 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ccn1 PE=2 SV=1 Q3TX21 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ccn1 PE=2 SV=1 0 2 2 0.7645 0 1 1 1 667.32196 1333.63664 1333.63678 -0.1 -0.00007 0/0 0 0 4809353 HCD 30 MS2 0 233.9 110 38.853 9223 9223 9214 QEplus033719.raw F4 260.6 187.8 208.2 167.4 390.4 189.1 54 3.27 1 FALSE 1.14E-05 0.0002714 0.774 -250 30622 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AACNLAR [K].aAcNLAR.[L] N-Term(TMT6plex); C3(Carbamidomethyl) 5 Q8C605 ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkp PE=1 SV=1 Q9WUA3-2; Q8C605; Q9WUA3; D3YUA3; Q9D255 "Isoform 2 of ATP-dependent 6-phosphofructokinase, platelet type OS=Mus musculus OX=10090 GN=Pfkp; ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkp PE=1 SV=1; ATP-dependent 6-phosphofructokinase, platelet type OS=Mus musculus OX=10090 GN=Pfkp PE=1 SV=1; ATP-dependent 6-phosphofructokinase, platelet type (Fragment) OS=Mus musculus OX=10090 GN=Pfkp PE=1 SV=1; PFK domain-containing protein OS=Mus musculus OX=10090 GN=Pfkp PE=2 SV=1" 0 2 2 0.4423 0 1 1 1 502.77893 1004.55058 1004.55087 -0.28 -0.00014 0/0 0 0 36777704 HCD 30 MS2 22.46587 525.6 27.645 38.8671 9228 9228 9225 QEplus033719.raw F4 488.8 509.9 543.1 444.7 682.2 485 245 2.6 1 FALSE 0.0005373 0.008187 0.436 -250 30635 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGTLTQNR [K].tGTLTQNR.[M] N-Term(TMT6plex) 16 Q8VDN2 Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1 A0A0G2JGX4; E9QNX7; Q3TXF9; Q8VDN2; Q6ZQ49; Q8VCE0; Q9WV27; Q3UCH8; Q64436; Q8R0E8; Q9Z1W8; Q6PIC6; Q8R3M4; D3YYN7; Q3UHK5; Q91WH7 Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a3 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp4a PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a2 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a3 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-4 OS=Mus musculus OX=10090 GN=Atp1a4 PE=1 SV=3; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Potassium-transporting ATPase alpha chain 1 OS=Mus musculus OX=10090 GN=Atp4a PE=1 SV=3; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a3 PE=2 SV=1; Potassium-transporting ATPase alpha chain 2 OS=Mus musculus OX=10090 GN=Atp12a PE=1 SV=3; Sodium/potassium-transporting ATPase subunit alpha-3 OS=Mus musculus OX=10090 GN=Atp1a3 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a2 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a2 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp4a PE=1 SV=1 0 2 2 0.3646 0 1 1 1 560.32013 1119.63298 1119.63195 0.92 0.00052 0/0 0 0 15001285 HCD 30 MS2 17.38969 627.8 110 38.8721 9230 9230 9225 QEplus033719.raw F4 622.4 431.2 664.5 639.2 628 781.2 291 2.88 1 FALSE 1.14E-05 0.0001388 0.83 -250 30645 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDGSVAGVR [K].nDGSVAGVR.[Y] N-Term(TMT6plex) 7 Q922J3 CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1 Q922J3-2; Q922J3; D3Z3M7; Q8C0S5; F8WIA1; F6RAY2; D3Z2Z1 Isoform 2 of CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1; CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; CAP-Gly domain-containing linker protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; CAP-Gly domain-containing linker protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1 0 2 2 0.5201 0 1 1 1 552.30487 1103.60246 1103.60065 1.64 0.00091 0/0 0 0 12237994 HCD 30 MS2 42.13189 917.3 110 38.8746 9231 9231 9225 QEplus033719.raw F4 924.1 722.3 975.1 873 888.2 1121.2 252 2.73 1 FALSE 0.001293 0.01761 0.303 -250 30650 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQEEEREAIR [K].eQEEEREAIR.[L] N-Term(TMT6plex) 1 P54731 FAS-associated factor 1 OS=Mus musculus OX=10090 GN=Faf1 PE=1 SV=2 P54731 FAS-associated factor 1 OS=Mus musculus OX=10090 GN=Faf1 PE=1 SV=2 1 3 3 0.5012 0 1 1 1 506.59695 1517.77631 1517.77572 0.39 0.0002 0/0 0 0 11029441 HCD 30 MS2 49.86799 758.1 110 38.8771 9232 9232 9225 QEplus033719.raw F4 745.6 661.8 816.4 621.5 915 788.6 185 4.01 1 FALSE 1.14E-05 1.40E-06 1.21 -250 30667 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQLTPGDGHHVNR [K].dQLTPGDGHHVNR.[V] N-Term(TMT6plex) 1 Q8BM72 Heat shock 70 kDa protein 13 OS=Mus musculus OX=10090 GN=Hspa13 PE=1 SV=1 Q8BM72 Heat shock 70 kDa protein 13 OS=Mus musculus OX=10090 GN=Hspa13 PE=1 SV=1 0 4 4 0.5901 0 1 1 1 419.46823 1674.85109 1674.85095 0.09 0.00004 0/0 0 0 3692372.25 HCD 30 MS2 45.27463 425.6 110 38.8821 9234 9234 9225 QEplus033719.raw F4 593.5 304.7 462.9 340.2 389.7 462.7 188 4.66 1 FALSE 1.14E-05 1.40E-05 1.019 -250 30682 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAQSICER [R].eAQSIcER.[V] N-Term(TMT6plex); C6(Carbamidomethyl) 10 Q5SWR1; Q5SVG5 AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=2 SV=1;AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=1 Q8CC13; Q5SWR1; Q5SVG5; O35643; H3BIY9; Q5SVG4; H3BKM0; Q9DBG3; Q3TVN4; Q3U1K9 AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=2 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=2 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=1; AP-1 complex subunit beta-1 OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=2; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1; AP-2 complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=2 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=2 SV=1 0 2 2 0.4854 0 1 1 1 611.30878 1221.61028 1221.6095 0.63 0.00039 0/0 0 0 19453996 HCD 30 MS2 10.3049 493 83.764 38.892 9237 9237 9236 QEplus033719.raw F4 507.2 425.9 525.1 451.7 517.1 530.8 128 3.09 2 FALSE 1.14E-05 0.0001322 0.834 -250 30696 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YAAGVR [K].yAAGVR.[N] N-Term(TMT6plex) 4 P29341 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2 P29341; Q3U8U8; Q8BN32; Q99KL3 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1 0 2 2 0.4919 0 1 1 1 433.25861 865.50994 865.50932 0.71 0.00031 0/0 0 0 46833712 HCD 30 MS2 49.7409 648.6 19.167 38.8989 9240 9240 9236 QEplus033719.raw F4 637.6 586.1 713.5 494.5 863.5 596.4 21 1.85 1 FALSE 0.007721 0.1263 -0.053 -250 30712 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCGYSVR [K].scGYSVR.[F] N-Term(TMT6plex); C2(Carbamidomethyl) 6 E9QNN1 DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1 O70133-2; Q3UR42; O70133-3; E9QNN1; A0A087WPL5; O70133 Isoform 2 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; DEAH box protein 9 (Fragment) OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; Isoform 3 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=2 0 2 2 0.6109 0 1 1 1 529.26892 1057.53057 1057.5298 0.73 0.00038 0/0 0 0 24521704 HCD 30 MS2 34.92037 610.2 41.013 38.9035 9242 9242 9236 QEplus033719.raw F4 594.2 595.2 717.8 474.6 699.7 579.9 62 2.39 1 FALSE 0.00079 0.01092 0.39 -250 30719 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQVEIAQR [R].rQVEIAQR.[E] N-Term(TMT6plex) 2 P16460 Argininosuccinate synthase OS=Mus musculus OX=10090 GN=Ass1 PE=1 SV=1 P16460; Q3UEJ7 Argininosuccinate synthase OS=Mus musculus OX=10090 GN=Ass1 PE=1 SV=1; Argininosuccinate synthase OS=Mus musculus OX=10090 GN=Ass1 PE=2 SV=1 1 3 3 0.2854 0 1 1 1 410.24896 1228.73233 1228.73233 0 0 0/0 0 0 22299238 HCD 30 MS2 10.42277 352.5 57.92 38.9057 9243 9243 9236 QEplus033719.raw F4 358.6 426.8 383.6 244.4 367.1 334.4 349 4.17 1 FALSE 1.14E-05 2.05E-07 1.368 -250 30760 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGRPVNSNCEINNR [R].dGRPVNSNcEINNR.[S] N-Term(TMT6plex); C9(Carbamidomethyl) 3 Q9R0L6 Pericentriolar material 1 protein OS=Mus musculus OX=10090 GN=Pcm1 PE=1 SV=2 Q9R0L6; B2RSW8; Q9R0L6-2 Pericentriolar material 1 protein OS=Mus musculus OX=10090 GN=Pcm1 PE=1 SV=2; Pericentriolar material 1 OS=Mus musculus OX=10090 GN=Pcm1 PE=2 SV=1; Isoform 2 of Pericentriolar material 1 protein OS=Mus musculus OX=10090 GN=Pcm1 0 3 3 0.7525 0 1 1 1 625.31049 1873.9169 1873.91362 1.75 0.00109 0/0 0 0 4864033.5 HCD 30 MS2 15.00522 215.7 110 38.923 9249 9249 9247 QEplus033719.raw F4 218.4 168 229.2 189.2 246.1 243.3 151 4.97 1 FALSE 1.14E-05 4.25E-11 2.068 -250 30785 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRYSAGK [R].dRYSAGk.[R] N-Term(TMT6plex); K7(TMT6plex) 8 Q5U222 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1 Q9CSD9; Q3UXW3; Q5U222; Q3V0Z8; Q921Y3; A1L333; Q61656; Q8BTS0 Helicase C-terminal domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Ddx5 protein OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 1 3 3 0.2315 0 1 1 1 418.91183 1254.72095 1254.72066 0.23 0.0001 0/0 0 0 12483673 HCD 30 MS2 50.55832 781 65.767 38.9298 9252 9252 9247 QEplus033719.raw F4 1258.3 556 816.3 534.5 749.9 770.8 283 2.16 1 FALSE 0.008331 0.1439 -0.079 -250 30802 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRSEEERTTEAEK [K].dRSEEERTTEAEk.[N] N-Term(TMT6plex); K13(TMT6plex) 2 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q3UF33 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; ERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 2 3 3 0.5498 0 1 1 1 680.02002 2038.04551 2038.0453 0.1 0.00007 0/0 0 0 5904191.5 HCD 30 MS2 14.62206 134.2 110 38.9348 9254 9254 9247 QEplus033719.raw F4 154 115.3 135.8 94.7 182.9 122.6 302 3.31 1 FALSE 1.14E-05 1.21E-05 1.032 -250 30817 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTSESTNQR [R].lTSESTNQR.[V] N-Term(TMT6plex) 1 Q8R1V4 Transmembrane emp24 domain-containing protein 4 OS=Mus musculus OX=10090 GN=Tmed4 PE=1 SV=1 Q8R1V4 Transmembrane emp24 domain-containing protein 4 OS=Mus musculus OX=10090 GN=Tmed4 PE=1 SV=1 0 2 2 0.4254 0 1 1 1 632.83899 1264.6707 1264.66946 0.98 0.00062 0/0 0 0 4523043.5 HCD 30 MS2 0 270 110 38.9398 9256 9256 9247 QEplus033719.raw F4 318.6 170.5 252.9 317.9 235.7 324.4 288 3.15 1 FALSE 1.14E-05 1.18E-05 1.034 -250 30827 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FSASSGGGGSR [R].fSASSGGGGSR.[G] N-Term(TMT6plex) 8 A0JNY7 "Eukaryotic translation initiation factor 4, gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=2 SV=1" A0JNY7; F7DAB1; F6TW20; Q62448; F7CHS2; Q62448-2; F7CBP1; G3XA17 "Eukaryotic translation initiation factor 4, gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 2 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g2 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 2 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g2 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=1 SV=2; Eukaryotic translation initiation factor 4 gamma 2 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g2 PE=1 SV=8; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2; Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=1 SV=1" 0 2 2 0.5519 0 1 1 1 599.80457 1198.60185 1198.60138 0.4 0.00024 0/0 0 0 4438005.5 HCD 30 MS2 0 485.9 110 38.9423 9257 9257 9247 QEplus033719.raw F4 478.3 439.3 523.6 387.5 546.1 540.5 109 3.66 1 FALSE 1.14E-05 1.23E-09 1.79 -250 30844 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRAETEQGEQQR [R].lRAETEQGEQQR.[Q] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.659 0 1 1 1 558.63104 1673.87857 1673.87683 1.04 0.00058 0/0 0 0 128023992 HCD 30 MS2 1.359324 185.6 9.429 38.9544 9261 9261 9258 QEplus033719.raw F4 187.5 163 209.8 162.5 197.1 193.5 272 5.19 2 FALSE 1.14E-05 1.86E-11 2.136 -250 30855 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTCSRPDTECK [R].gTcSRPDTEck.[F] N-Term(TMT6plex); C3(Carbamidomethyl); C10(Carbamidomethyl); K11(TMT6plex) 8 Q8CAQ1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Mbnl1 PE=2 SV=1 A0A0A6YWB0; A0A0A6YXP3; Q8CAQ1; Q8CHF5; A0A0A6YXE3; Q9JKP5; G3X9Q0; A0A0A6YVV8 Muscleblind-like protein 1 OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1; Muscleblind-like protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mbnl1 PE=2 SV=1; MKIAA0428 protein (Fragment) OS=Mus musculus OX=10090 GN=Mbnl1 PE=2 SV=1; Muscleblind-like protein 1 OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1; Muscleblind-like protein 1 OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1; Muscleblind-like protein 1 OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1; Muscleblind-like protein 1 OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1 0 3 3 0.7757 0 1 1 1 590.29645 1768.87479 1768.87222 1.45 0.00086 0/0 0 0 37464172 HCD 30 MS2 12.19162 741.6 48.197 38.9589 9263 9263 9258 QEplus033719.raw F4 788.6 767.2 704.6 523.2 1063.5 602.3 142 2.63 1 FALSE 1.14E-05 1.59E-06 1.199 -250 30860 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLETEDTSGSPSR [R].rLETEDTSGSPSR.[A] N-Term(TMT6plex) 3 A0A0R4J0Q5 Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1 Q3V159; A0A0R4J0Q5; P21619 Uncharacterized protein OS=Mus musculus OX=10090 GN=Lmnb2 PE=2 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=2 1 3 3 0.7212 0 1 1 1 555.28717 1663.84696 1663.84486 1.26 0.0007 0/0 0 0 31293608 HCD 30 MS2 8.037283 205.2 56.774 38.9612 9264 9264 9258 QEplus033719.raw F4 229.3 135.7 246.4 220.5 150 249.1 215 5.13 1 FALSE 1.14E-05 6.88E-16 2.979 -250 30866 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGPPMGSR [R].aGPPMGSR.[F] N-Term(TMT6plex) 4 Q80U88 Eukaryotic translation initiation factor 4H (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0038 PE=4 SV=3 Q80U88; Q9WUK2-2; Q3V244; Q9WUK2 Eukaryotic translation initiation factor 4H (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0038 PE=4 SV=3; Isoform Short of Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h; Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h PE=2 SV=1; Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h PE=1 SV=3 0 2 2 0.6194 0 1 1 1 501.27377 1001.54027 1001.53997 0.3 0.00015 0/0 0 0 21573418 HCD 30 MS2 36.68925 610.2 43.644 38.9657 9266 9266 9258 QEplus033719.raw F4 545 592 693.2 410.5 791.2 629.2 105 2.47 1 FALSE 0.001607 0.02548 0.241 -250 30882 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QFSEER [K].qFSEER.[I] N-Term(TMT6plex) 7 Q8C952 Flap endonuclease 1 OS=Mus musculus OX=10090 GN=Fen1 PE=2 SV=1 Q8C952; Q3TGH6; Q99M86; Q91Z50; Q8R069; P39749; Q8C5X6 Flap endonuclease 1 OS=Mus musculus OX=10090 GN=Fen1 PE=2 SV=1; Flap endonuclease 1 OS=Mus musculus OX=10090 GN=Fen1 PE=2 SV=1; Flap endonuclease 1 OS=Mus musculus OX=10090 GN=Fen1 PE=3 SV=1; Flap endonuclease 1 OS=Mus musculus OX=10090 GN=Fen1 PE=1 SV=1; Flap endonuclease 1 OS=Mus musculus OX=10090 GN=Fen1 PE=2 SV=1; Flap endonuclease 1 OS=Mus musculus OX=10090 GN=Fen1 PE=1 SV=1; Flap endonuclease 1 OS=Mus musculus OX=10090 GN=Fen1 PE=2 SV=1 0 2 2 0.2062 0 1 1 1 512.76721 1024.52715 1024.52609 1.03 0.00053 0/0 0 0 20802348 HCD 30 MS2 3.771773 881.5 106.994 38.978 9270 9270 9269 QEplus033719.raw F4 876.4 915.9 770.7 496.4 1516 713.7 103 1.94 1 FALSE 0.003851 0.07259 0.081 -250 30906 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQVEIAQR [R].rQVEIAQR.[E] N-Term(TMT6plex) 2 P16460 Argininosuccinate synthase OS=Mus musculus OX=10090 GN=Ass1 PE=1 SV=1 P16460; Q3UEJ7 Argininosuccinate synthase OS=Mus musculus OX=10090 GN=Ass1 PE=1 SV=1; Argininosuccinate synthase OS=Mus musculus OX=10090 GN=Ass1 PE=2 SV=1 1 2 2 0.2705 0 1 1 1 614.87054 1228.73381 1228.73233 1.2 0.00074 0/0 0 0 19321262 HCD 30 MS2 2.999385 428.8 110 38.9873 9274 9274 9269 QEplus033719.raw F4 416.6 418.8 473.6 400.9 445.6 417.5 314 2.92 1 FALSE 0.0005076 0.007974 0.44 -250 30914 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RATAAECLR [K].rATAAEcLR.[H] N-Term(TMT6plex); C7(Carbamidomethyl) 2 Q3UB06 Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Srpk1 PE=1 SV=1 Q3UB06; Q3US65 Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Srpk1 PE=1 SV=1; Protein kinase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Srpk1 PE=2 SV=1 1 3 3 0.4893 0 1 1 1 426.23816 1276.69992 1276.69932 0.47 0.0002 0/0 0 0 12986495 HCD 30 MS2 34.994 608.7 100.745 38.9897 9275 9275 9269 QEplus033719.raw F4 762.3 404.2 663.6 426.9 753.5 641.7 331 4.19 1 FALSE 1.14E-05 7.15E-05 0.885 -250 30920 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRAETEQGEQQR [R].lRAETEQGEQQR.[Q] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.7426 0 1 1 1 837.44354 1673.87981 1673.87683 1.78 0.00149 0/0 0 0 11100521 HCD 30 MS2 0 85.2 110 38.9922 9276 9276 9269 QEplus033719.raw F4 91.1 75.8 90.3 73.1 89 91.7 293 4.04 2 FALSE 1.14E-05 2.31E-08 1.548 -250 30934 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YNPDEAR [K].yNPDEAR.[SN] N-Term(TMT6plex) 9 J3QNT6 Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad15 PE=3 SV=1 J3QNT6; A0A1Y7VK80; J3QQ02; J3QPI8; A0A1Y7VNG9; Q3UJQ5; Q3TQZ4; Q3UTA4; Q8BX20 Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad15 PE=3 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad12 PE=3 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad11 PE=1 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad16 PE=3 SV=1; Eukaryotic translation initiation factor 1A domain-containing 18 OS=Mus musculus OX=10090 GN=Eif1ad18 PE=3 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad4 PE=2 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad3 PE=2 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad10 PE=2 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad7 PE=2 SV=1 0 2 2 0.4256 0 1 1 1 547.27881 1093.55034 1093.54755 2.55 0.00139 0/0 0 0 7097823.5 HCD 30 MS2 7.979484 384.4 110 38.9972 9278 9278 9269 QEplus033719.raw F4 364.8 349 389 341.4 494.3 367.7 118 2.42 1 FALSE 0.001177 0.01584 0.323 -250 30940 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELAEQTR [R].eLAEQTR.[N] N-Term(TMT6plex) 22 D3YWR3 Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=1 Q80TS3-5; Q80TS3-4; D3YWR3; D3Z4V0; D3Z593; D3YTW7; D3Z4S7; D3YWB1; Q80TS3-2; Q80TS3; D3YVT9; D3Z634; D3Z5M6; K3W4M8; D3Z6H9; D3Z6H7; D3YU23; D3Z3X6; D3Z6J2; Q80TS3-3; Q80TS3-6; D3Z3G4 Isoform 5 of Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3; Isoform 4 of Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3; Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=1; Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=1; Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=1; Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=1; Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=1; Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=1; Isoform 2 of Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3; Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=3; Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=1; Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=1; Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=1; Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=1; Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=1; Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=1; Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=1; Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=1; Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=1; Isoform 3 of Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3; Isoform 6 of Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3; Adhesion G protein-coupled receptor L3 OS=Mus musculus OX=10090 GN=Adgrl3 PE=1 SV=1 0 2 2 0.1462 0 1 1 1 538.30219 1075.59709 1075.5945 2.41 0.00129 0/0 0 0 3850209.75 HCD 30 MS2 62.25163 695.3 110 38.9997 9279 9279 9269 QEplus033719.raw F4 775.5 574.1 747.1 647 687.5 740.8 281 1.71 1 FALSE 0.001762 0.03015 0.216 -250 30944 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEGVAYR [K].gEGVAYR.[G] N-Term(TMT6plex) 18 A0A0N4SWH3; B9EK95 Dysferlin OS=Mus musculus OX=10090 GN=Dysf PE=1 SV=1;Myof protein OS=Mus musculus OX=10090 GN=Myof PE=2 SV=1 A0A0N4SWH3; Q69ZN7-2; A0A286YDF5; A0A0N4SUN3; A0A0N4SVX9; E9Q423; Q9ESD7; B9EK95; Q9ESD7-3; A0A0N4SWG7; Q69ZN7-4; E9Q390; A0A0N4SUJ2; E9PXU9; Q69ZN7; Q9ESD7-2; A0A0N4SV63; E9QL12 Dysferlin OS=Mus musculus OX=10090 GN=Dysf PE=1 SV=1; Isoform 2 of Myoferlin OS=Mus musculus OX=10090 GN=Myof; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=1; Dysferlin OS=Mus musculus OX=10090 GN=Dysf PE=1 SV=1; Dysferlin OS=Mus musculus OX=10090 GN=Dysf PE=1 SV=1; Dysferlin OS=Mus musculus OX=10090 GN=Dysf PE=1 SV=1; Dysferlin OS=Mus musculus OX=10090 GN=Dysf PE=1 SV=3; Myof protein OS=Mus musculus OX=10090 GN=Myof PE=2 SV=1; Isoform 3 of Dysferlin OS=Mus musculus OX=10090 GN=Dysf; Dysferlin OS=Mus musculus OX=10090 GN=Dysf PE=1 SV=1; Isoform 4 of Myoferlin OS=Mus musculus OX=10090 GN=Myof; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=2; Dysferlin OS=Mus musculus OX=10090 GN=Dysf PE=1 SV=1; Dysferlin OS=Mus musculus OX=10090 GN=Dysf PE=1 SV=1; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=2; Isoform 2 of Dysferlin OS=Mus musculus OX=10090 GN=Dysf; Dysferlin OS=Mus musculus OX=10090 GN=Dysf PE=1 SV=1; Dysferlin OS=Mus musculus OX=10090 GN=Dysf PE=1 SV=1 0 2 2 0.2946 0 1 1 1 490.772 980.53673 980.53626 0.48 0.00023 0/0 0 0 13582410 HCD 30 MS2 47.59587 946.7 110 39.007 9281 9281 9280 QEplus033719.raw F4 966.2 694.7 1035.8 759 1118.6 1106 111 2.24 2 FALSE 0.001421 0.02019 0.279 -250 30952 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSFEGAR [R].gSFEGAR.[Y] N-Term(TMT6plex) 2 Q14AX9 "Mannose receptor, C type 2 OS=Mus musculus OX=10090 GN=Mrc2 PE=2 SV=1" Q14AX9; Q64449 "Mannose receptor, C type 2 OS=Mus musculus OX=10090 GN=Mrc2 PE=2 SV=1; C-type mannose receptor 2 OS=Mus musculus OX=10090 GN=Mrc2 PE=1 SV=3" 0 2 2 0.1837 0 1 1 1 476.75659 952.50591 952.50496 0.99 0.00047 0/0 0 0 24513174 HCD 30 MS2 19.87219 1185.8 110 39.0095 9282 9282 9280 QEplus033719.raw F4 1135.7 994.5 1287.1 834.8 1557.1 1305.7 50 2.45 1 FALSE 0.0004888 0.007787 0.443 -250 30981 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTTAQDGHVHR [R].lTTAQDGHVHR.[L] N-Term(TMT6plex) 2 F7AGE9; D3YYU8 Obscurin-like protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Obsl1 PE=1 SV=8;Obscurin-like protein 1 OS=Mus musculus OX=10090 GN=Obsl1 PE=1 SV=1 F7AGE9; D3YYU8 Obscurin-like protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Obsl1 PE=1 SV=8; Obscurin-like protein 1 OS=Mus musculus OX=10090 GN=Obsl1 PE=1 SV=1 0 4 4 0.6292 0 1 1 1 366.70389 1463.79372 1463.79164 1.42 0.00052 0/0 0 0 9118805 HCD 30 MS2 25.25271 367.9 107.652 39.0212 9287 9287 9280 QEplus033719.raw F4 509.7 212.8 375 335.4 326 448.3 359 3.29 2 FALSE 1.14E-05 1.44E-05 1.017 -250 30990 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSYGGPPR [R].dSYGGPPR.[R] N-Term(TMT6plex) 2 Q91VM5 "RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" A0A2I3BRL8; Q91VM5 "Predicted gene 7324 OS=Mus musculus OX=10090 GN=Gm7324 PE=4 SV=1; RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" 0 2 2 0.6279 0 1 1 1 539.28076 1077.55425 1077.55264 1.49 0.0008 0/0 0 0 7896464.5 HCD 30 MS2 38.10131 756.5 110 39.0237 9288 9288 9280 QEplus033719.raw F4 806.1 723.9 830.8 558.8 894.1 725.2 159 2.58 1 FALSE 2.26E-05 0.001019 0.66 -250 31009 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LADGPHGCAGR [R].lADGPHGcAGR.[L] N-Term(TMT6plex); C8(Carbamidomethyl) 1 Q8BV57 Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D OS=Mus musculus OX=10090 GN=Ssc5d PE=1 SV=1 Q8BV57 Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D OS=Mus musculus OX=10090 GN=Ssc5d PE=1 SV=1 0 3 3 0.6131 0 1 1 1 447.22961 1339.67429 1339.67383 0.34 0.00015 0/0 0 0 8023963.5 HCD 30 MS2 17.74009 357.5 110 39.036 9292 9292 9291 QEplus033719.raw F4 339.6 274.2 414.5 341.2 376.1 399.2 143 4.42 1 FALSE 1.14E-05 4.19E-10 1.879 -250 31016 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVPDGDCR [R].eVPDGDcR.[F] N-Term(TMT6plex); C7(Carbamidomethyl) 1 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 0 2 2 0.5236 0 1 1 1 588.78033 1176.55339 1176.55165 1.48 0.00087 0/0 0 0 97816664 HCD 30 MS2 2.859075 538.4 16.091 39.0407 9294 9294 9291 QEplus033719.raw F4 539.5 556.1 625.4 330.9 725.4 452.9 26 2.75 1 FALSE 0.0007056 0.0102 0.401 -250 31031 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTPQGQR [K].lTPQGQR.[D] N-Term(TMT6plex) 5 Q5M9P3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1 D3YUT3; D3Z722; D3Z5R8; Q5M9P3; Q9CZX8 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=2; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=1; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=8; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=3 0 2 2 0.3692 0 1 1 1 514.80682 1028.60637 1028.60501 1.32 0.00068 0/0 0 0 23498426 HCD 30 MS2 20.79527 1053 77.655 39.0498 9298 9298 9291 QEplus033719.raw F4 1058.5 814.8 1089.8 817.3 1294.5 1243.3 153 2.14 1 FALSE 0.0036 0.06897 0.09 -250 31040 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELTASDR [K].eLTASDR.[Y] N-Term(TMT6plex) 5 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.3072 0 1 1 1 510.78128 1020.55528 1020.5523 2.92 0.00149 0/0 0 0 23158180 HCD 30 MS2 33.53514 803.2 53.826 39.052 9299 9299 9291 QEplus033719.raw F4 876.2 331.6 707.6 1168.7 473.7 1261.2 209 2.93 2 FALSE 0.0002323 0.004753 0.507 -250 31048 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLDTTGR [R].tLDTTGR.[M] N-Term(TMT6plex) 6 Q3UGT1 Carnitine O-palmitoyltransferase OS=Mus musculus OX=10090 GN=Cpt1a PE=2 SV=1 Q3UGT1; A8ASF5; A0A494BBF2; Q7TQD5; A0A494BAD3; A0A494BAC7 "Carnitine O-palmitoyltransferase OS=Mus musculus OX=10090 GN=Cpt1a PE=2 SV=1; Carnitine O-palmitoyltransferase OS=Mus musculus OX=10090 GN=Cpt1a PE=2 SV=1; Carnitine O-palmitoyltransferase 1, liver isoform (Fragment) OS=Mus musculus OX=10090 GN=Cpt1a PE=1 SV=1; Carnitine O-palmitoyltransferase OS=Mus musculus OX=10090 GN=Cpt1a PE=1 SV=1; Carnitine O-palmitoyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Cpt1a PE=1 SV=1; Carnitine O-palmitoyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Cpt1a PE=1 SV=1" 0 2 2 0.5391 0 1 1 1 496.7829 992.55852 992.55739 1.14 0.00056 0/0 0 0 18052346 HCD 30 MS2 38.12737 735.8 59.037 39.0543 9300 9300 9291 QEplus033719.raw F4 680.1 701.3 837.4 597 891 708.2 84 2.3 1 FALSE 0.001533 0.02307 0.257 -250 31058 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNVNDGVAQSTR [K].sNVNDGVAQSTR.[I] N-Term(TMT6plex) 3 P17751 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5 H7BXC3; P17751; P17751-2 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=1; Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5; Isoform 2 of Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 0 2 2 0.7715 0 1 1 1 738.88477 1476.76225 1476.7604 1.26 0.00093 0/0 0 0 12614378 HCD 30 MS2 6.814442 437.8 110 39.0568 9301 9301 9291 QEplus033719.raw F4 527.1 271.2 427.2 568.9 335 497.6 221 4.99 1 FALSE 1.14E-05 6.26E-11 2.036 -250 31075 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHGCMANDANTK [R].qHGcMANDANTk.[Y] N-Term(TMT6plex); C4(Carbamidomethyl); K12(TMT6plex) 2 Q99K28 ADP-ribosylation factor GTPase-activating protein 2 OS=Mus musculus OX=10090 GN=Arfgap2 PE=1 SV=1 Q99K28-2; Q99K28 Isoform 2 of ADP-ribosylation factor GTPase-activating protein 2 OS=Mus musculus OX=10090 GN=Arfgap2; ADP-ribosylation factor GTPase-activating protein 2 OS=Mus musculus OX=10090 GN=Arfgap2 PE=1 SV=1 0 3 3 0.8761 0 1 1 1 602.30042 1804.88669 1804.88346 1.79 0.00108 0/0 0 0 10936149 HCD 30 MS2 18.32565 291.7 110 39.0666 9304 9304 9302 QEplus033719.raw F4 296.9 215.5 268.9 284.3 361.3 323.2 149 5.57 1 FALSE 1.14E-05 1.74E-10 1.951 -250 31080 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGEVMR [R].tGEVMR.[I] N-Term(TMT6plex) 3 Q91VD9 "NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs1 PE=1 SV=2" Q3TIU7; Q91VD9; Q3UIQ2 "NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs1 PE=2 SV=1; NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs1 PE=1 SV=2; NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs1 PE=2 SV=1" 0 2 2 0.3836 0 1 1 1 461.25558 921.50389 921.50252 1.49 0.00069 0/0 0 0 82304048 HCD 30 MS2 31.76186 620.5 12.937 39.0689 9305 9305 9302 QEplus033719.raw F4 775.8 404.8 571.2 687 682.8 601.4 124 1.46 1 FALSE 0.00459 0.08161 0.057 -250 31098 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELEECQR [R].eLEEcQR.[N] N-Term(TMT6plex); C5(Carbamidomethyl) 4 Q9WUD1 E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1 Q9WUD1; Q3TYJ0; A0A494BBI6; A0A494BBF6 E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stub1 PE=2 SV=1; E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1; E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1 0 2 2 0.3174 0 1 1 1 596.79651 1192.58574 1192.58295 2.34 0.00139 0/0 0 0 14929455 HCD 30 MS2 13.31625 742 110 39.0759 9308 9308 9302 QEplus033719.raw F4 816.2 693.1 782.4 511.3 906.5 742.3 95 2.3 1 FALSE 0.001719 0.02896 0.222 -250 31105 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVEETVRR [R].tVEETVRR.[L] N-Term(TMT6plex) 3 Q9D0R2 "Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2" Q3U630; Q9D0R2; Q99KJ4 "Threonyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1; Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2; Threonyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1" 1 2 2 0.3163 0 1 1 1 609.85461 1218.70195 1218.70037 1.3 0.00079 0/0 0 0 11864940 HCD 30 MS2 18.06031 394.9 110 39.0784 9309 9309 9302 QEplus033719.raw F4 449.1 336 431.7 314.9 423 414.9 398 2.15 1 FALSE 1.14E-05 0.0009381 0.668 -250 31114 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQSAAVTPSSSTSSAR [R].sQSAAVTPSSSTSSAR.[A] N-Term(TMT6plex) 3 Q9JKV1 Proteasomal ubiquitin receptor ADRM1 OS=Mus musculus OX=10090 GN=Adrm1 PE=1 SV=2 Q9JKV1; A0A0A6YVU8; A0A1S6GWG3 Proteasomal ubiquitin receptor ADRM1 OS=Mus musculus OX=10090 GN=Adrm1 PE=1 SV=2; Predicted pseudogene 9774 OS=Mus musculus OX=10090 GN=Gm9774 PE=3 SV=1; RPN13_C domain-containing protein OS=Mus musculus OX=10090 GN=Adrm1 PE=2 SV=1 0 2 2 0.7723 0 1 1 1 876.95129 1752.89531 1752.89254 1.58 0.00139 0/0 0 0 9345228 HCD 30 MS2 2.71059 243.9 110 39.0809 9310 9310 9302 QEplus033719.raw F4 254.6 199.1 276 215.7 246.5 271.5 244 5.05 1 FALSE 1.14E-05 2.05E-14 2.697 -250 31121 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQSAAVTPSSSTSSAR [R].sQSAAVTPSSSTSSAR.[A] N-Term(TMT6plex) 3 Q9JKV1 Proteasomal ubiquitin receptor ADRM1 OS=Mus musculus OX=10090 GN=Adrm1 PE=1 SV=2 Q9JKV1; A0A0A6YVU8; A0A1S6GWG3 Proteasomal ubiquitin receptor ADRM1 OS=Mus musculus OX=10090 GN=Adrm1 PE=1 SV=2; Predicted pseudogene 9774 OS=Mus musculus OX=10090 GN=Gm9774 PE=3 SV=1; RPN13_C domain-containing protein OS=Mus musculus OX=10090 GN=Adrm1 PE=2 SV=1 0 3 3 0.7595 0 1 1 1 584.97015 1752.89591 1752.89254 1.92 0.00112 0/0 0 0 9170481 HCD 30 MS2 38.72206 330.3 110 39.0834 9311 9311 9302 QEplus033719.raw F4 355.6 211.8 314.5 385.4 369.6 344.9 244 5.82 1 FALSE 1.14E-05 4.64E-12 2.25 -250 31125 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPPSDAVQR [R].nPPSDAVQR.[A] N-Term(TMT6plex) 8 B7ZP42 Cask protein OS=Mus musculus OX=10090 GN=Cask PE=2 SV=1 B7ZP42; O70589; B9EJ23; O70589-4; O70589-2; O70589-5; O70589-3; A0A067XG53 Cask protein OS=Mus musculus OX=10090 GN=Cask PE=2 SV=1; Peripheral plasma membrane protein CASK OS=Mus musculus OX=10090 GN=Cask PE=1 SV=2; Cask protein OS=Mus musculus OX=10090 GN=Cask PE=2 SV=1; Isoform 4 of Peripheral plasma membrane protein CASK OS=Mus musculus OX=10090 GN=Cask; Isoform 2 of Peripheral plasma membrane protein CASK OS=Mus musculus OX=10090 GN=Cask; Isoform 5 of Peripheral plasma membrane protein CASK OS=Mus musculus OX=10090 GN=Cask; Isoform 3 of Peripheral plasma membrane protein CASK OS=Mus musculus OX=10090 GN=Cask; Peripheral plasma membrane protein CASK (Fragment) OS=Mus musculus OX=10090 GN=Cask PE=1 SV=1 0 2 2 0.5103 0 1 1 1 606.83081 1212.65434 1212.65342 0.77 0.00046 0/0 0 0 6654978.5 HCD 30 MS2 8.776342 294.7 110 39.0859 9312 9312 9302 QEplus033719.raw F4 314.1 257.2 320.1 285.3 287 304.7 194 2.92 1 FALSE 5.44E-05 0.001811 0.608 -250 31151 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVEETVRR [R].tVEETVRR.[L] N-Term(TMT6plex) 3 Q9D0R2 "Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2" Q3U630; Q9D0R2; Q99KJ4 "Threonyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1; Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2; Threonyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1" 1 3 3 0.3907 0 1 1 1 406.9057 1218.70255 1218.70037 1.79 0.00073 0/0 0 0 115552480 HCD 30 MS2 9.631872 388.7 10.495 39.098 9316 9316 9313 QEplus033719.raw F4 381.3 263.6 365.3 367 595.2 359.6 384 3.43 1 FALSE 1.14E-05 2.39E-07 1.356 -250 31167 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IYDREQTR [K].iYDREQTR.[Y] N-Term(TMT6plex) 10 Q9JKF1; Q9D408 Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2;Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1 Q9JKF1; A0A0U1RNG5; Q05CQ4; Q3TR56; Q8CGH5; Q9D408; Q8CDW9; Q80UW7; Q3TPD2; Q6ZQK2 Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2; Ras GTPase-activating-like protein IQGAP1 (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2; Iqgap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Iqgap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; IQ motif containing GTPase activating protein 1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; MKIAA0051 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1 1 3 3 0.4826 0 1 1 1 437.24066 1309.70743 1309.70618 0.96 0.00042 0/0 0 0 32401270 HCD 30 MS2 58.87673 516.4 29.964 39.1048 9319 9319 9313 QEplus033719.raw F4 503.4 467.1 533.1 420.9 644.7 529.5 330 2.3 2 FALSE 0.004441 0.07974 0.062 -250 31174 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNVNDGVAQSTR [K].sNVNDGVAQSTR.[I] N-Term(TMT6plex) 3 P17751 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5 H7BXC3; P17751; P17751-2 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=1; Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5; Isoform 2 of Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 0 3 3 0.744 0 1 1 1 492.92554 1476.76206 1476.7604 1.12 0.00055 0/0 0 0 28849718 HCD 30 MS2 20.96639 379.1 68.081 39.107 9320 9320 9313 QEplus033719.raw F4 392.4 283.4 383.7 374.5 412.6 427.7 214 4.96 1 FALSE 1.14E-05 6.68E-08 1.461 -250 31179 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EWQSSQR [K].eWQSSQR.[R] N-Term(TMT6plex) 1 Q8BL66 Early endosome antigen 1 OS=Mus musculus OX=10090 GN=Eea1 PE=1 SV=2 Q8BL66 Early endosome antigen 1 OS=Mus musculus OX=10090 GN=Eea1 PE=1 SV=2 0 2 2 0.1116 0 1 1 1 575.2973 1149.58733 1149.585 2.02 0.00116 0/0 0 0 18942176 HCD 30 MS2 53.02209 829.3 68.912 39.1093 9321 9321 9313 QEplus033719.raw F4 885.6 724.6 885 642.4 1022.1 816 173 2.15 1 FALSE 0.003928 0.07311 0.08 -250 31190 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YINTEHGGSQAR [R].yINTEHGGSQAR.[F] N-Term(TMT6plex) 5 Q3TYS4 Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1 Q3TYS4; Q8CDS4; Q3TIS3; Q9D662; Q3UKB4 Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1; Protein transport protein Sec23B OS=Mus musculus OX=10090 GN=Sec23b PE=1 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1 0 3 3 0.598 0 1 1 1 521.26898 1561.79239 1561.79203 0.23 0.00012 0/0 0 0 15879642 HCD 30 MS2 15.66403 370.9 110 39.1141 9323 9323 9313 QEplus033719.raw F4 408.7 358.4 367.3 291.3 496.7 303 209 5 1 FALSE 1.14E-05 4.22E-09 1.688 -250 31198 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAMVAR [K].dAMVAR.[A] N-Term(TMT6plex) 2 Q93092 Transaldolase OS=Mus musculus OX=10090 GN=Taldo1 PE=1 SV=2 Q93092; A0A1B0GR11 Transaldolase OS=Mus musculus OX=10090 GN=Taldo1 PE=1 SV=2; Transaldolase OS=Mus musculus OX=10090 GN=Taldo1 PE=1 SV=1 0 2 2 0.3478 0 1 1 1 446.25027 891.49327 891.49195 1.48 0.00066 0/0 0 0 37992900 HCD 30 MS2 14.10864 824.7 54.785 39.1214 9325 9325 9324 QEplus033719.raw F4 890.8 687.4 816.2 737.6 931.5 884.4 79 2.3 1 FALSE 0.003058 0.05935 0.116 -250 31222 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDRPQFQNR [K].tDRPQFQNR.[K] N-Term(TMT6plex) 3 Q8VDM6 Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus OX=10090 GN=Hnrnpul1 PE=1 SV=1 Q8VDM6; Q8VDM6-3; Q8VDM6-2 Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus OX=10090 GN=Hnrnpul1 PE=1 SV=1; Isoform 3 of Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus OX=10090 GN=Hnrnpul1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus OX=10090 GN=Hnrnpul1 0 3 3 0.4417 0 1 1 1 464.2511 1390.73874 1390.73888 -0.1 -0.00004 0/0 0 0 41021128 HCD 30 MS2 31.78875 543.6 33.991 39.1306 9329 9329 9324 QEplus033719.raw F4 684.6 430 518 499.6 627.5 502 268 3.69 1 FALSE 1.14E-05 5.38E-06 1.099 -250 31228 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AENSQLTER [R].aENSQLTER.[I] N-Term(TMT6plex) 4 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0; Q8C7E8 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.5043 0 1 1 1 638.83893 1276.67058 1276.66946 0.88 0.00056 0/0 0 0 20568616 HCD 30 MS2 0 637.5 110 39.1331 9330 9330 9324 QEplus033719.raw F4 594.2 647.1 666.8 461.2 860.4 595.2 239 3.45 1 FALSE 0.0002019 0.004023 0.527 -250 31242 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTNESLER [RK].gTNESLER.[Q-] N-Term(TMT6plex) 11 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 P03995; A0MTM0; A0A0A6YWC8; Q3TWV0; P03995-2; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Glial fibrillary acidic protein OS=Mus musculus OX=10090 GN=Gfap PE=1 SV=4; Glial fibrillary acidic protein (Fragment) OS=Mus musculus OX=10090 GN=Gfap PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Isoform 2 of Glial fibrillary acidic protein OS=Mus musculus OX=10090 GN=Gfap; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.3031 0 1 1 1 567.80316 1134.59905 1134.59523 3.36 0.00191 0/0 0 0 9100287 HCD 30 MS2 29.24593 636 110 39.1381 9332 9332 9324 QEplus033719.raw F4 353.3 816.1 349.6 259.8 1487.9 549.2 228 2.54 2 FALSE 1.14E-05 0.000122 0.841 -250 31251 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGQVYTTNTR [R].gGQVYTTNTR.[G] N-Term(TMT6plex) 1 Q6NXL1 "Sec24-related gene family, member D (S. cerevisiae) OS=Mus musculus OX=10090 GN=Sec24d PE=1 SV=1" Q6NXL1 "Sec24-related gene family, member D (S. cerevisiae) OS=Mus musculus OX=10090 GN=Sec24d PE=1 SV=1" 0 2 2 0.665 0 1 1 1 663.35541 1325.70354 1325.70109 1.84 0.00122 0/0 0 0 8915269 HCD 30 MS2 0 414 110 39.1406 9333 9333 9324 QEplus033719.raw F4 412.4 420.4 445.4 280.6 567.6 357.4 265 4.12 1 FALSE 1.14E-05 1.03E-07 1.425 -250 31261 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETICSQDER [K].eTIcSQDER.[I] N-Term(TMT6plex); C4(Carbamidomethyl) 5 Q3TF74 Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1 Q3TF74; Q5PPQ7; Q3TEU8; Q9WUM4; Q3U8F0 Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin-1C OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1 0 2 2 0.493 0 1 1 1 683.82806 1366.64885 1366.64701 1.35 0.00092 0/0 0 0 8886126 HCD 30 MS2 0 366.3 110 39.1431 9334 9334 9324 QEplus033719.raw F4 358 402 398.1 248.2 464.7 326.6 64 3.59 1 FALSE 1.14E-05 3.08E-06 1.145 -250 31268 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETDFEHR [K].eTDFEHR.[M] N-Term(TMT6plex) 2 P12382 "ATP-dependent 6-phosphofructokinase, liver type OS=Mus musculus OX=10090 GN=Pfkl PE=1 SV=4" Q8CD98; P12382 "PFK domain-containing protein OS=Mus musculus OX=10090 GN=Pfkl PE=2 SV=1; ATP-dependent 6-phosphofructokinase, liver type OS=Mus musculus OX=10090 GN=Pfkl PE=1 SV=4" 0 2 2 0.5436 0 1 1 1 581.78918 1162.57109 1162.56902 1.79 0.00104 0/0 0 0 5474875 HCD 30 MS2 47.29955 321.6 110 39.1505 9336 9336 9335 QEplus033719.raw F4 377.8 232.7 299 320 383.9 316.1 70 2.98 1 FALSE 5.44E-05 0.002119 0.593 -250 31278 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHTNATIR [R].vHTNATIR.[N] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.4337 0 1 1 1 570.83887 1140.67046 1140.66867 1.57 0.00089 0/0 0 0 5439273.5 HCD 30 MS2 30.0474 282.3 110 39.153 9337 9337 9335 QEplus033719.raw F4 297.9 126.7 221.8 467 194 386.5 185 2.49 2 FALSE 0.0006216 0.009281 0.416 -250 31285 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLEAER [RK].tLEAER.[QV] N-Term(TMT6plex) 29 Q9JKY5; Q9QXS1-3; Q9QXS1 Huntingtin-interacting protein 1-related protein OS=Mus musculus OX=10090 GN=Hip1r PE=1 SV=2;Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9JKY5; Q9QXS1-14; Q6ZQ77; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; Q80UP1; E9Q3W4; Q6S388; Q6P1F5; Q6S385; Q6S392; Q9D689; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q8BPA2; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Huntingtin-interacting protein 1-related protein OS=Mus musculus OX=10090 GN=Hip1r PE=1 SV=2; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; MKIAA0655 protein (Fragment) OS=Mus musculus OX=10090 GN=Hip1r PE=2 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Hip1r protein (Fragment) OS=Mus musculus OX=10090 GN=Hip1r PE=2 SV=1; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Huntingtin interacting protein 1 related OS=Mus musculus OX=10090 GN=Hip1r PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hip1r PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; I/LWEQ domain-containing protein OS=Mus musculus OX=10090 GN=Hip1r PE=2 SV=1; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.204 0 1 1 2 474.27219 947.5371 947.53593 1.23 0.00058 0/0 0 0 240934832 HCD 30 MS2 15.34178 584.9 5.865 39.1552 9338 9338 9335 QEplus033719.raw F4 637.6 454.6 571.7 538.8 683.1 623.8 175 2.01 3 FALSE 0.007344 0.1179 -0.038 -250 31295 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TALSADR [K].tALSADR.[V] N-Term(TMT6plex) 3 Q9WTI7-3 Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c Q9WTI7; Q9WTI7-3; Q9WTI7-2 Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c PE=1 SV=2; Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Isoform 2 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c 0 2 2 0.2198 0 1 1 1 481.77789 962.54851 962.54683 1.75 0.00084 0/0 0 0 42893964 HCD 30 MS2 45.26944 579.6 20.486 39.1575 9339 9339 9335 QEplus033719.raw F4 594.4 504.1 619.9 514.1 633.7 611.4 160 2.73 1 FALSE 0.0002419 0.005057 0.5 -250 31314 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTGEGTSLR [K].tTGEGTSLR.[G] N-Term(TMT6plex) 4 Q3ULG5 DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1 Q3ULG5; Q3UC10; Q8C5L1; P97311 DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=2 SV=1; DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Mcm6 PE=2 SV=1; DNA replication licensing factor MCM6 OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1 0 2 2 0.5137 0 1 1 1 575.81793 1150.62859 1150.62653 1.79 0.00103 0/0 0 0 20255868 HCD 30 MS2 32.35722 708.7 73.812 39.162 9341 9341 9335 QEplus033719.raw F4 697.2 717.5 700.6 453 1032.1 652 238 2.92 1 FALSE 1.14E-05 2.12E-06 1.175 -250 31320 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REIYDR [K].rEIYDR.[Y] N-Term(TMT6plex) 3 A0A087WR37; Q9QYI5; Q9QYI5-1 DnaJ homolog subfamily B member 2 (Fragment) OS=Mus musculus OX=10090 GN=Dnajb2 PE=1 SV=1; DnaJ homolog subfamily B member 2 OS=Mus musculus OX=10090 GN=Dnajb2 PE=1 SV=3; Isoform 2 of DnaJ homolog subfamily B member 2 OS=Mus musculus OX=10090 GN=Dnajb2 1 3 3 0.1521 0 1 1 1 360.87173 1080.60065 1080.59992 0.67 0.00024 0/0 0 0 8026398.5 HCD 30 MS2 56.68085 470.1 110 39.1645 9342 9342 9335 QEplus033719.raw F4 616.7 356.2 489.3 423 427.9 507.8 146 2.63 1 FALSE 0.001676 0.02757 0.229 -250 31321 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RELYDR [K].rELYDR.[Y] N-Term(TMT6plex) 2 Q3TFF0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja2 PE=2 SV=1 Q3TFF0; Q9QYJ0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja2 PE=2 SV=1; DnaJ homolog subfamily A member 2 OS=Mus musculus OX=10090 GN=Dnaja2 PE=1 SV=1 1 3 3 0.1521 0 1 2 2 360.87173 1080.60065 1080.59992 0.67 0.00024 0/0 0 0 8026398.5 HCD 30 MS2 56.68085 470.1 110 39.1645 9342 9342 9335 QEplus033719.raw F4 616.7 356.2 489.3 423 427.9 507.8 146 2.63 1 FALSE 0.001676 0.02757 0.229 -250 31343 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHTNATIR [R].vHTNATIR.[N] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.6639 0 1 1 1 380.89478 1140.66977 1140.66867 0.97 0.00037 0/0 0 0 29246698 HCD 30 MS2 10.9418 181.7 46.641 39.1791 9347 9347 9346 QEplus033719.raw F4 219.8 100.3 159.8 236.4 130.4 243.6 188 3.6 2 FALSE 1.14E-05 6.98E-05 0.887 -250 31360 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYVTCHTCR [K].eYVTcHTcR.[S] N-Term(TMT6plex); C5(Carbamidomethyl); C8(Carbamidomethyl) 1 Q99L45 Eukaryotic translation initiation factor 2 subunit 2 OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1 Q99L45 Eukaryotic translation initiation factor 2 subunit 2 OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1 0 3 3 0.7084 0 1 1 1 485.56277 1454.67377 1454.67179 1.36 0.00066 0/0 0 0 47505844 HCD 30 MS2 11.31264 239.4 29.647 39.1836 9349 9349 9346 QEplus033719.raw F4 242.9 210.5 261.7 206.1 288.2 227.2 53 4.63 1 FALSE 1.14E-05 1.82E-07 1.378 -250 31383 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIPGGGSGGGGSGSGGGGGGSGGGR [K].qIPGGGSGGGGSGSGGGGGGSGGGR.[S] N-Term(TMT6plex) 2 Q8BMA6 Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=2 Q8BMA6; A2AAN2 Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=2; Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=1 0 3 3 0.8956 0 1 1 1 687.32953 2059.97403 2059.97029 1.82 0.00125 0/0 0 0 7071090 HCD 30 MS2 46.49953 43.2 110 39.1956 9354 9354 9346 QEplus033719.raw F4 49.6 31 52.1 31.2 50.3 45 83 8.24 1 FALSE 1.14E-05 6.31E-16 4.743 -250 31389 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQFSESESR [R].sQFSESESR.[S] N-Term(TMT6plex) 3 A0A1B0GR85 RIKEN cDNA 2900026A02 gene OS=Mus musculus OX=10090 GN=2900026A02Rik PE=1 SV=1 A0A1D5RLN6; A0A1B0GR85; Q8BRV5 RIKEN cDNA 2900026A02 gene OS=Mus musculus OX=10090 GN=2900026A02Rik PE=1 SV=1; RIKEN cDNA 2900026A02 gene OS=Mus musculus OX=10090 GN=2900026A02Rik PE=1 SV=1; Uncharacterized protein KIAA1671 OS=Mus musculus OX=10090 GN=Kiaa1671 PE=2 SV=1 0 2 2 0.5964 0 1 1 1 643.3158 1285.62432 1285.62217 1.66 0.00107 0/0 0 0 3938744.25 HCD 30 MS2 0 175.8 110 39.1982 9355 9355 9346 QEplus033719.raw F4 180.8 118.7 165.1 189.4 161.6 239.4 63 3.37 1 FALSE 1.14E-05 3.39E-05 0.947 -250 31397 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CTQDDINQAR [K].cTQDDINQAR.[S] N-Term(TMT6plex); C1(Carbamidomethyl) 5 Q60902 Epidermal growth factor receptor substrate 15-like 1 OS=Mus musculus OX=10090 GN=Eps15l1 PE=1 SV=3 Q60902-4; Q60902-3; Q60902-2; Q60902; A0A1D5RLS1 Isoform 4 of Epidermal growth factor receptor substrate 15-like 1 OS=Mus musculus OX=10090 GN=Eps15l1; Isoform 3 of Epidermal growth factor receptor substrate 15-like 1 OS=Mus musculus OX=10090 GN=Eps15l1; Isoform 2 of Epidermal growth factor receptor substrate 15-like 1 OS=Mus musculus OX=10090 GN=Eps15l1; Epidermal growth factor receptor substrate 15-like 1 OS=Mus musculus OX=10090 GN=Eps15l1 PE=1 SV=3; Epidermal growth factor receptor substrate 15-like 1 OS=Mus musculus OX=10090 GN=Eps15l1 PE=1 SV=1 0 2 2 0.7041 0 1 1 1 725.35272 1449.69817 1449.69536 1.94 0.00141 0/0 0 0 3713027.75 HCD 30 MS2 0 143.7 110 39.2007 9356 9356 9346 QEplus033719.raw F4 151.6 124.3 159.5 114.1 170.3 142.5 74 3.38 1 FALSE 1.14E-05 4.92E-08 1.486 -250 31403 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYVTCHTCR [K].eYVTcHTcR.[S] N-Term(TMT6plex); C5(Carbamidomethyl); C8(Carbamidomethyl) 1 Q99L45 Eukaryotic translation initiation factor 2 subunit 2 OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1 Q99L45 Eukaryotic translation initiation factor 2 subunit 2 OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1 0 2 2 0.6946 0 1 1 1 727.84058 1454.67388 1454.67179 1.44 0.00105 0/0 0 0 5483279.5 HCD 30 MS2 0 209.4 110 39.208 9358 9358 9357 QEplus033719.raw F4 221.6 181 235 192.8 243.1 182.9 52 3.7 1 FALSE 1.14E-05 3.41E-05 0.946 -250 31407 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IYDREQTR [K].iYDREQTR.[Y] N-Term(TMT6plex) 10 Q9JKF1; Q9D408 Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2;Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1 Q9JKF1; A0A0U1RNG5; Q05CQ4; Q3TR56; Q8CGH5; Q9D408; Q8CDW9; Q80UW7; Q3TPD2; Q6ZQK2 Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2; Ras GTPase-activating-like protein IQGAP1 (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2; Iqgap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Iqgap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; IQ motif containing GTPase activating protein 1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; MKIAA0051 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1 1 2 2 0.2179 0 1 1 1 655.3562 1309.70513 1309.70618 -0.8 -0.00053 0/0 0 0 1510451 HCD 30 MS2 38.36092 128.5 110 39.2105 9359 9359 9357 QEplus033719.raw F4 128.9 119.4 128.3 105.8 165.4 123.2 304 1.56 2 FALSE 0.001248 0.01692 0.311 -250 31450 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AASCLEGDRGR [R].aAScLEGDRGR.[F] N-Term(TMT6plex); C4(Carbamidomethyl) 4 Q9CQ60 6-phosphogluconolactonase OS=Mus musculus OX=10090 GN=Pgls PE=1 SV=1 Q8C6M6; F6X8L5; Q9CQ60; Q8CBG6 Glucosamine_iso domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; 6-phosphogluconolactonase (Fragment) OS=Mus musculus OX=10090 GN=Pgls PE=1 SV=1; 6-phosphogluconolactonase OS=Mus musculus OX=10090 GN=Pgls PE=1 SV=1; 6-phosphogluconolactonase OS=Mus musculus OX=10090 GN=Pgls PE=1 SV=1 1 2 2 0.549 0 1 1 1 710.86298 1420.71868 1420.71643 1.58 0.00112 0/0 0 0 4469444.5 HCD 30 MS2 0 93.2 110 39.2366 9369 9369 9368 QEplus033719.raw F4 86.1 78.6 96.8 78.3 108.1 111.2 177 3.06 1 FALSE 1.14E-05 7.41E-07 1.262 -250 31455 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQVQQDAQSAGGSR [R].sQVQQDAQSAGGSR.[L] N-Term(TMT6plex) 3 A0A3Q4EGK3 Latent-transforming growth factor beta-binding protein 1 OS=Mus musculus OX=10090 GN=Ltbp1 PE=1 SV=1 A0A3Q4EGK3; Q8C6S0; Q8CG19 Latent-transforming growth factor beta-binding protein 1 OS=Mus musculus OX=10090 GN=Ltbp1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ltbp1 PE=2 SV=1; Latent-transforming growth factor beta-binding protein 1 OS=Mus musculus OX=10090 GN=Ltbp1 PE=1 SV=2 0 2 2 0.7569 0 1 1 1 824.41681 1647.82634 1647.82479 0.94 0.00078 0/0 0 0 5520017.5 HCD 30 MS2 6.520644 101 110 39.2391 9370 9370 9368 QEplus033719.raw F4 91.9 90.9 113.1 97.7 97.1 115.4 188 4.36 1 FALSE 1.14E-05 1.69E-14 2.713 -250 31462 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAREPNIDR [R].aAREPNIDR.[S] N-Term(TMT6plex) 7 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 3 3 0.4726 0 1 1 1 424.24017 1270.70597 1270.70651 -0.43 -0.00018 0/0 0 0 30508736 HCD 30 MS2 26.98705 421 37.815 39.2414 9371 9371 9368 QEplus033719.raw F4 352.9 427.7 524.5 290.1 482 449 312 3.83 1 FALSE 0.000108 0.003054 0.556 -250 31479 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTDEGTYR [K].kTDEGTYR.[C] N-Term(TMT6plex); K1(TMT6plex) 9 E9QB01; A0A0A6YY47 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2;Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 E9QB01; P13595-3; P13595-2; A0A0A6YWU2; P13595-4; A0A0A6YY91; A0A0A6YY47; P13595; E9Q589 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2; Isoform 3 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Isoform 2 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Isoform 4 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 (Fragment) OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=3; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 1 3 3 0.4403 0 1 1 1 476.60184 1427.79096 1427.78946 1.05 0.0005 0/0 0 0 23066740 HCD 30 MS2 37.69348 897.4 60.685 39.2481 9374 9374 9368 QEplus033719.raw F4 1041.3 534.8 1042.1 1056.8 798.3 911.3 306 2.43 2 FALSE 0.0005076 0.007871 0.441 -250 31486 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYSGSQGGYDR [R].dYSGSQGGYDR.[Y] N-Term(TMT6plex) 1 O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 0 2 2 0.6238 0 1 1 1 717.32922 1433.65117 1433.64945 1.2 0.00086 0/0 0 0 11057638 HCD 30 MS2 4.109 379.4 110 39.2529 9376 9376 9368 QEplus033719.raw F4 371.4 406.8 412.6 261 516.2 308.4 16 4.28 1 FALSE 1.14E-05 3.89E-08 1.505 -250 31491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESEYVR [K].eSEYVR.[F] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.4318 0 1 1 1 506.2706 1011.53392 1011.53084 3.05 0.00154 0/0 0 0 9857282 HCD 30 MS2 50.1157 998.6 110 39.2554 9377 9377 9368 QEplus033719.raw F4 1663.5 445.4 786.5 1297.7 603.9 1194.3 76 1.76 2 FALSE 0.007237 0.1152 -0.032 -250 31497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVGMSNDGR [K].aVGMSNDGR.[F] N-Term(TMT6plex) 8 Q6SLK2 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk1 PE=2 SV=1 P83741-2; Q3TU87; Q6SLK2; P83741; P83741-3; P83741-5; P83741-6; P83741-4 Isoform 2 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1; Protein kinase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wnk1 PE=2 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk1 PE=2 SV=1; Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1 PE=1 SV=2; Isoform 3 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1; Isoform 5 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1; Isoform 6 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1; Isoform 4 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1 0 2 2 0.6831 0 1 1 1 568.28723 1135.56719 1135.57272 -4.88 -0.00277 0/0 0 0 6341944 HCD 30 MS2 52.52863 604.8 110 39.2579 9378 9378 9368 QEplus033719.raw F4 535.9 566.3 535.6 462.8 843.2 684.8 119 3.44 1 FALSE 1.14E-05 1.07E-06 1.232 -250 31514 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELAQEQAR [K].eLAQEQAR.[R] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5281 0 1 1 1 587.32593 1173.64458 1173.64252 1.76 0.00103 0/0 0 0 181091696 HCD 30 MS2 2.461541 511 8.896 39.27 9382 9382 9379 QEplus033719.raw F4 556.1 446.2 540.4 465.2 529.5 528.4 267 3.2 2 FALSE 1.14E-05 0.0004176 0.738 -250 31521 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALDDTAR [R].aLDDTAR.[E] N-Term(TMT6plex) 2 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 P14733; Q8C553 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3; IF rod domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Lmnb1 PE=2 SV=1 0 2 2 0.2863 0 1 1 1 495.77435 990.54143 990.54174 -0.31 -0.00016 0/0 0 0 16402155 HCD 30 MS2 20.33869 790.8 80.557 39.2745 9384 9384 9379 QEplus033719.raw F4 850 710.8 738 677.1 1053.6 715.5 248 2.34 1 FALSE 0.0002019 0.004024 0.526 -250 31529 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LNEANSDTSR [K].lNEANSDTSR.[E] N-Term(TMT6plex) 2 Q9CT10 Ran-binding protein 3 OS=Mus musculus OX=10090 GN=Ranbp3 PE=1 SV=2 Q9CT10; A0A3B2WCL5 Ran-binding protein 3 OS=Mus musculus OX=10090 GN=Ranbp3 PE=1 SV=2; Ran-binding protein 3 OS=Mus musculus OX=10090 GN=Ranbp3 PE=1 SV=1 0 2 2 0.7116 0 1 1 1 668.33972 1335.67217 1335.67019 1.48 0.00099 0/0 0 0 12976401 HCD 30 MS2 7.106531 388.8 110 39.2771 9385 9385 9379 QEplus033719.raw F4 415.3 381.6 412.3 270.7 493.4 359.3 173 3.71 1 FALSE 1.14E-05 2.67E-06 1.156 -250 31553 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCEAEADRAEVSR [K].gcEAEADRAEVSR.[F] N-Term(TMT6plex); C2(Carbamidomethyl) 1 Q6P5B0 RRP12-like protein OS=Mus musculus OX=10090 GN=Rrp12 PE=1 SV=1 Q6P5B0 RRP12-like protein OS=Mus musculus OX=10090 GN=Rrp12 PE=1 SV=1 1 3 3 0.6292 0 1 1 1 560.27295 1678.80429 1678.80161 1.6 0.00089 0/0 0 0 6289392 HCD 30 MS2 26.77878 417.8 110 39.2846 9388 9388 9379 QEplus033719.raw F4 446 342.3 473.6 360.1 423.6 461.4 95 3.91 1 FALSE 1.14E-05 2.42E-08 1.544 -250 31577 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHSNPNYDK [R].eHSNPNYDk.[T] N-Term(TMT6plex); K9(TMT6plex) 1 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 3 3 0.4622 0 1 1 1 521.27167 1561.80045 1561.80109 -0.41 -0.00021 0/0 0 0 23539004 HCD 30 MS2 10.7256 381.8 61.519 39.2989 9393 9393 9390 QEplus033719.raw F4 401.5 296.6 387.8 402.1 467.9 334.7 227 4.63 1 FALSE 1.14E-05 7.32E-06 1.073 -250 31585 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVGMSNDGR [K].aVGMSNDGR.[F] N-Term(TMT6plex) 8 Q6SLK2 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk1 PE=2 SV=1 P83741-2; Q3TU87; Q6SLK2; P83741; P83741-3; P83741-5; P83741-6; P83741-4 Isoform 2 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1; Protein kinase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wnk1 PE=2 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk1 PE=2 SV=1; Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1 PE=1 SV=2; Isoform 3 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1; Isoform 5 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1; Isoform 6 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1; Isoform 4 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1 0 2 2 0.6277 0 1 1 1 568.29028 1135.57329 1135.57272 0.5 0.00028 0/0 0 0 11158794 HCD 30 MS2 20.17528 684.8 110 39.3014 9394 9394 9390 QEplus033719.raw F4 647.7 600.8 675.8 603.6 790.7 790.5 132 3.25 1 FALSE 1.14E-05 1.48E-06 1.205 -250 31591 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERQDADGQMK [K].eRQDADGQMk.[E] N-Term(TMT6plex); K10(TMT6plex) 5 P70336 Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1 Q6A035; P70336; A0A1Y7VMN0; P70336-2; F8VPK5 Non-specific serine/threonine protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Rock2 PE=2 SV=1; Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1; Rho-associated protein kinase 2 (Fragment) OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1; Isoform 2 of Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2; Rho-associated protein kinase OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1 1 3 3 0.7227 0 1 1 1 545.95593 1635.85324 1635.85248 0.47 0.00026 0/0 0 0 9044378 HCD 30 MS2 24.20328 570.8 110 39.3039 9395 9395 9390 QEplus033719.raw F4 623.3 501.5 577.3 467 756.9 498.8 293 4.4 1 FALSE 1.14E-05 5.63E-10 1.854 -250 31597 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQLTNETSR [K].qQLTNETSR.[I] N-Term(TMT6plex) 2 Q8C3X2 "Coiled-coil domain-containing protein 90B, mitochondrial OS=Mus musculus OX=10090 GN=Ccdc90b PE=1 SV=1" Q8C3X2; Q8C3X2-2 "Coiled-coil domain-containing protein 90B, mitochondrial OS=Mus musculus OX=10090 GN=Ccdc90b PE=1 SV=1; Isoform 2 of Coiled-coil domain-containing protein 90B, mitochondrial OS=Mus musculus OX=10090 GN=Ccdc90b" 0 2 2 0.5748 0 1 1 1 653.35278 1305.69829 1305.69601 1.75 0.00114 0/0 0 0 5437283 HCD 30 MS2 50.79177 341.7 110 39.3064 9396 9396 9390 QEplus033719.raw F4 322.9 312.7 400.8 293.9 341.2 378.8 302 2.54 1 FALSE 1.14E-05 2.04E-05 0.989 -250 31606 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSHEQFR [R].vSHEQFR.[A] N-Term(TMT6plex) 4 Q8BTW9 Serine/threonine-protein kinase PAK 4 OS=Mus musculus OX=10090 GN=Pak4 PE=1 SV=1 Q8C015; Q8K0U2; Q8BTW9; Q8BVB0 Serine/threonine-protein kinase PAK 5 OS=Mus musculus OX=10090 GN=Pak5 PE=1 SV=1; Pak4 protein (Fragment) OS=Mus musculus OX=10090 GN=Pak4 PE=2 SV=1; Serine/threonine-protein kinase PAK 4 OS=Mus musculus OX=10090 GN=Pak4 PE=1 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Pak5 PE=2 SV=1 0 3 3 0.5385 0 1 1 1 377.87494 1131.61026 1131.61082 -0.49 -0.00019 0/0 0 0 4779156 HCD 30 MS2 42.6502 473.3 110 39.3089 9397 9397 9390 QEplus033719.raw F4 558.3 359.8 478.3 394.9 559.8 488.7 292 2.08 1 FALSE 0.001607 0.02532 0.242 -250 31612 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTDEGTYR [K].kTDEGTYR.[C] N-Term(TMT6plex); K1(TMT6plex) 9 E9QB01; A0A0A6YY47 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2;Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 E9QB01; P13595-3; P13595-2; A0A0A6YWU2; P13595-4; A0A0A6YY91; A0A0A6YY47; P13595; E9Q589 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2; Isoform 3 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Isoform 2 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Isoform 4 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 (Fragment) OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=3; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 1 2 2 0.5949 0 1 1 1 714.4007 1427.79411 1427.78946 3.26 0.00233 0/0 0 0 2876537.25 HCD 30 MS2 12.7483 104.3 110 39.3114 9398 9398 9390 QEplus033719.raw F4 126.7 57.8 105 128.1 86.4 122 339 2.37 2 FALSE 0.0008445 0.01175 0.377 -250 31617 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FAGSGNEENR [R].fAGSGNEENR.[N] N-Term(TMT6plex) 3 B2RR26 NHL repeat containing 2 OS=Mus musculus OX=10090 GN=Nhlrc2 PE=1 SV=1 B2RR26; Q8C1S8; Q9CW64 NHL repeat containing 2 OS=Mus musculus OX=10090 GN=Nhlrc2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nhlrc2 PE=2 SV=1; Thioredoxin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Nhlrc2 PE=2 SV=1 0 2 2 0.6975 0 1 1 1 655.31964 1309.63201 1309.63341 -1.07 -0.0007 0/0 0 0 1400441.75 HCD 30 MS2 0 171.1 110 39.3139 9399 9399 9390 QEplus033719.raw F4 172.8 140.2 169.1 160.1 189.1 195 82 3.67 1 FALSE 1.14E-05 4.03E-06 1.122 -250 31623 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSRPSQAAGDNQGDEAK [K].dSRPSQAAGDNQGDEAk.[E] N-Term(TMT6plex); K17(TMT6plex) 4 Q569Z6 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1 Q569Z6; Q8BZN7; Q8R353; Q8BV76 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Thrap3 protein OS=Mus musculus OX=10090 GN=Thrap3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Thrap3 PE=2 SV=1 0 3 3 0.7438 0 1 1 1 735.37115 2204.09891 2204.09437 2.06 0.00151 0/0 0 0 20151430 HCD 30 MS2 0 473.1 110 39.3164 9400 9400 9390 QEplus033719.raw F4 485.6 515.4 520.4 323.2 576.6 417.2 227 5.66 1 FALSE 1.14E-05 6.31E-16 3.867 -250 31630 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CVMTSRPR [R].cVMTSRPR.[G] N-Term(TMT6plex); C1(Carbamidomethyl) 2 D3Z2K2 "28S ribosomal protein S14, mitochondrial OS=Mus musculus OX=10090 GN=Mrps14 PE=1 SV=1" D3Z2K2; Q9CR88 "28S ribosomal protein S14, mitochondrial OS=Mus musculus OX=10090 GN=Mrps14 PE=1 SV=1; 28S ribosomal protein S14, mitochondrial OS=Mus musculus OX=10090 GN=Mrps14 PE=1 SV=1" 0 3 3 0.4725 0 1 1 1 412.55655 1235.65509 1235.65501 0.07 0.00003 0/0 0 0 5758199 HCD 30 MS2 72.45702 909.7 110 39.3237 9402 9402 9401 QEplus033719.raw F4 1258.1 484 900.7 723.5 1203.5 888.6 275 2.18 1 FALSE 0.0006869 0.01007 0.403 -250 31638 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAREPNIDR [R].aAREPNIDR.[S] N-Term(TMT6plex) 7 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 2 2 0.431 0 1 1 1 635.86023 1270.71318 1270.70651 5.25 0.00333 0/0 0 0 8336393.5 HCD 30 MS2 36.44234 308.4 110 39.3262 9403 9403 9401 QEplus033719.raw F4 261.2 295.7 377.8 235.7 319.9 360.4 283 2.32 1 FALSE 0.0001401 0.00321 0.551 -250 31654 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGNAVAVR [R].eGNAVAVR.[L] N-Term(TMT6plex) 3 O55222 Integrin-linked protein kinase OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2 O55222; A0A1B0GRF6; D3YZA5 Integrin-linked protein kinase OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2; Integrin-linked protein kinase OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=1; Integrin-linked protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2 0 2 2 0.4398 0 1 1 1 522.80408 1044.60088 1044.59992 0.91 0.00048 0/0 0 0 40972888 HCD 30 MS2 9.669964 598.5 37.346 39.3307 9405 9405 9401 QEplus033719.raw F4 612.6 576.4 611.9 432.6 803.3 554.2 289 2.66 1 FALSE 4.43E-05 0.001485 0.626 -250 31671 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTSGINPR [K].tTSGINPR.[H] N-Term(TMT6plex) 1 P02777 SWISS-PROT:P02777 (Bos taurus) similar to Platelet factor 4 P02777 SWISS-PROT:P02777 (Bos taurus) similar to Platelet factor 4 0 2 2 0.3682 0 1 1 1 537.80963 1074.61199 1074.61049 1.39 0.00075 0/0 0 0 14022756 HCD 30 MS2 23.32306 927.9 110 39.3355 9407 9407 9401 QEplus033719.raw F4 989.2 437.5 510.1 257.4 2777.5 595.8 327 2.39 1 TRUE 0.002056 0.03701 0.186 -250 31714 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAGEDPEGR [R].vAGEDPEGR.[R] N-Term(TMT6plex) 4 E9Q411 Neuroblastoma-amplified sequence OS=Mus musculus OX=10090 GN=Nbas PE=1 SV=1 E9Q411; Q6GQV6; Q80XK8; Q6PGH6 Neuroblastoma-amplified sequence OS=Mus musculus OX=10090 GN=Nbas PE=1 SV=1; Nbas protein (Fragment) OS=Mus musculus OX=10090 GN=Nbas PE=2 SV=1; Nbas protein (Fragment) OS=Mus musculus OX=10090 GN=Nbas PE=2 SV=1; Nbas protein OS=Mus musculus OX=10090 GN=Nbas PE=2 SV=1 0 2 2 0.5647 0 1 1 1 579.80292 1158.59856 1158.59523 2.87 0.00166 0/0 0 0 3215457.75 HCD 30 MS2 0 291.9 110 39.3553 9414 9414 9412 QEplus033719.raw F4 299.7 224.6 306.4 242.3 342.3 336.4 118 3.17 1 FALSE 1.14E-05 0.0002033 0.798 -250 31720 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGGADVNIR [R].rGGADVNIR.[HT] N-Term(TMT6plex) 4 A2RS68 U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 A0A1B0GR50; A2RS68; Q9CR32; A0A1B0GSX5 U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=3; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1 1 3 3 0.5707 0 1 1 1 396.23383 1186.68692 1186.68538 1.3 0.00051 0/0 0 0 46590592 HCD 30 MS2 24.96296 271.6 28.946 39.3576 9415 9415 9412 QEplus033719.raw F4 336.5 219.8 303.3 185.9 293.5 290.8 286 4.17 1 FALSE 1.14E-05 3.79E-06 1.128 -250 31744 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLNDTEDSGR [K].dLNDTEDSGR.[S] N-Term(TMT6plex) 6 A0A0U1RPM9 DNA-directed RNA polymerase (Fragment) OS=Mus musculus OX=10090 GN=Polr1a PE=1 SV=1 A0A0U1RPM9; Q3UZ02; Q3TUG2; O35134; Q8BNM6; Q3UHI3 DNA-directed RNA polymerase (Fragment) OS=Mus musculus OX=10090 GN=Polr1a PE=1 SV=1; DNA-directed RNA polymerase (Fragment) OS=Mus musculus OX=10090 GN=Polr1a PE=2 SV=1; DNA-directed RNA polymerase subunit (Fragment) OS=Mus musculus OX=10090 GN=Polr1a PE=2 SV=1; DNA-directed RNA polymerase I subunit RPA1 OS=Mus musculus OX=10090 GN=Polr1a PE=1 SV=2; DNA-directed RNA polymerase subunit (Fragment) OS=Mus musculus OX=10090 GN=Polr1a PE=2 SV=1; DNA-directed RNA polymerase subunit OS=Mus musculus OX=10090 GN=Polr1a PE=2 SV=1 0 2 2 0.5483 0 1 1 1 675.82159 1350.63591 1350.63347 1.81 0.00122 0/0 0 0 5638443.5 HCD 30 MS2 10.00118 213.9 110 39.3671 9419 9419 9412 QEplus033719.raw F4 246.4 174.4 231.4 143.6 251.1 236.3 48 3.52 1 FALSE 1.14E-05 2.98E-07 1.337 -250 31803 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYSGSQGGYDR [R].dYSGSQGGYDR.[Y] N-Term(TMT6plex) 1 O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 0 3 3 0.738 0 1 1 1 478.55527 1433.65125 1433.64945 1.25 0.0006 0/0 0 0 6712450.5 HCD 30 MS2 48.71682 433.4 110 39.3957 9430 9430 9423 QEplus033719.raw F4 427.9 270.8 407.7 426.7 580.9 486.3 16 3.13 1 FALSE 0.0006294 0.009686 0.41 -250 31809 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEDTDQSR [R].lEDTDQSR.[L] N-Term(TMT6plex) 3 Q9CXJ1 "Probable glutamate--tRNA ligase, mitochondrial OS=Mus musculus OX=10090 GN=Ears2 PE=1 SV=1" Q9CXJ1; Q8C143; Q6ZPF8 "Probable glutamate--tRNA ligase, mitochondrial OS=Mus musculus OX=10090 GN=Ears2 PE=1 SV=1; tRNA-synt_1c domain-containing protein OS=Mus musculus OX=10090 GN=Ears2 PE=2 SV=1; Glutamyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Ears2 PE=2 SV=1" 0 2 2 0.4605 0 1 1 1 596.80304 1192.5988 1192.60071 -1.6 -0.00095 0/0 0 0 5166916 HCD 30 MS2 33.32158 388 110 39.3982 9431 9431 9423 QEplus033719.raw F4 365.3 304.9 415.6 357.2 440.2 445 131 2.15 1 FALSE 0.00574 0.09637 0.017 -250 31814 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGGADVNIR [R].rGGADVNIR.[HT] N-Term(TMT6plex) 4 A2RS68 U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 A0A1B0GR50; A2RS68; Q9CR32; A0A1B0GSX5 U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=3; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1 1 2 2 0.3585 0 1 1 1 593.84717 1186.68706 1186.68538 1.41 0.00084 0/0 0 0 4769511.5 HCD 30 MS2 24.01928 214.4 110 39.4007 9432 9432 9423 QEplus033719.raw F4 225.6 191.1 239.5 160.8 249.4 220.1 282 2.12 1 FALSE 0.001351 0.01912 0.289 -250 31830 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTEEQLR [K].tTEEQLR.[Q] N-Term(TMT6plex) 5 Q7M739 Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1 Q8K2T9; Q7M739; F6ZDS4; F6RX08; Q3UVR0 Tpr protein OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1 0 2 2 0.3784 0 1 1 1 553.30762 1105.60796 1105.60507 2.61 0.00144 0/0 0 0 15484958 HCD 30 MS2 31.44597 601.2 93.624 39.4105 9435 9435 9434 QEplus033719.raw F4 653.5 558 628.8 467.7 726.5 572.8 212 2.22 1 FALSE 0.00124 0.01669 0.313 -250 31846 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IYPGHGR [K].iYPGHGR.[R] N-Term(TMT6plex) 4 Q3UW40 TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1 Q3UW40; Q8BT08; Q8BP67; Q9CS31 TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1; TRASH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1; 60S ribosomal protein L24 OS=Mus musculus OX=10090 GN=Rpl24 PE=1 SV=2; TRASH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1 0 2 2 0.3367 0 1 1 1 514.79718 1028.58708 1028.58388 3.12 0.0016 0/0 0 0 59882108 HCD 30 MS2 4.227342 607.7 15.818 39.415 9437 9437 9434 QEplus033719.raw F4 471.2 518 674.5 529.4 708.1 744.9 129 1.99 1 FALSE 0.001615 0.02596 0.238 -250 31856 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTSLETR [K].dTSLETR.[R] N-Term(TMT6plex) 1 Q9CWJ9 Bifunctional purine biosynthesis protein ATIC OS=Mus musculus OX=10090 GN=Atic PE=1 SV=2 Q9CWJ9 Bifunctional purine biosynthesis protein ATIC OS=Mus musculus OX=10090 GN=Atic PE=1 SV=2 0 2 2 0.4046 0 1 1 1 525.78589 1050.5645 1050.56287 1.55 0.00082 0/0 0 0 43445512 HCD 30 MS2 12.79511 760.9 47.409 39.4172 9438 9438 9434 QEplus033719.raw F4 784.2 580.8 783.8 724.8 789.5 902.3 154 2.62 1 FALSE 0.0003496 0.006768 0.463 -250 31892 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AATDSTPRGEQSDK [K].aATDSTPRGEQSDk.[G] N-Term(TMT6plex); K14(TMT6plex) 3 Q3TJZ7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Jpt2 PE=2 SV=1 Q3TJZ7; Q6PGH2; Q3U7P4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Jpt2 PE=2 SV=1; Jupiter microtubule associated homolog 2 OS=Mus musculus OX=10090 GN=Jpt2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Jpt2 PE=2 SV=1 1 3 3 0.61 0 1 1 1 641.00757 1921.00815 1921.0027 2.84 0.00182 0/0 0 0 5789807.5 HCD 30 MS2 0 286.1 110 39.4295 9443 9443 9434 QEplus033719.raw F4 319.4 263.6 237.6 135.1 539.9 220.8 348 2.59 1 FALSE 1.14E-05 7.28E-06 1.074 -250 31950 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEYAVR [K].gEYAVR.[A] N-Term(TMT6plex) 3 Q91VR5 ATP-dependent RNA helicase DDX1 OS=Mus musculus OX=10090 GN=Ddx1 PE=1 SV=1 Q91VR5; Q3V1Z7; Q922B8 ATP-dependent RNA helicase DDX1 OS=Mus musculus OX=10090 GN=Ddx1 PE=1 SV=1; ATP-dependent RNA helicase DDX1 OS=Mus musculus OX=10090 GN=Ddx1 PE=2 SV=1; ATP-dependent RNA helicase DDX1 OS=Mus musculus OX=10090 GN=Ddx1 PE=2 SV=1 0 2 2 0.2424 0 1 1 1 462.26157 923.51586 923.5148 1.15 0.00053 0/0 0 0 21970414 HCD 30 MS2 46.71549 681 36.49 39.4529 9452 9452 9445 QEplus033719.raw F4 696.7 563.2 743.6 581.6 815.6 685.5 94 2.31 1 FALSE 0.002853 0.05582 0.125 -250 31972 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YTQVGPDHNR [K].yTQVGPDHNR.[SW] N-Term(TMT6plex) 7 E9QNN1 DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1 O70133-2; Q3UR42; A0A087WRT3; E9QNN1; A0A0R4J2C3; A0A087WPL5; O70133 Isoform 2 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; DEAH box protein 9 (Fragment) OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; ATP-dependent RNA helicase A (Fragment) OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=2 0 2 2 0.6756 0 1 1 1 708.36542 1415.72356 1415.72289 0.47 0.00033 0/0 0 0 6118622 HCD 30 MS2 29.64843 229.6 110 39.4604 9455 9455 9445 QEplus033719.raw F4 207 237.3 254.3 169.6 272.9 236.6 164 2.62 1 FALSE 1.14E-05 0.0001624 0.817 -250 31981 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGDGSCQCHTGYK [R].qGDGScQcHTGYk.[G] N-Term(TMT6plex); C6(Carbamidomethyl); C8(Carbamidomethyl); K13(TMT6plex) 1 Q9CYA0 Protein disulfide isomerase Creld2 OS=Mus musculus OX=10090 GN=Creld2 PE=1 SV=1 Q9CYA0 Protein disulfide isomerase Creld2 OS=Mus musculus OX=10090 GN=Creld2 PE=1 SV=1 0 3 3 0.6944 0 1 1 1 652.64246 1955.91281 1955.9104 1.23 0.0008 0/0 0 0 11282486 HCD 30 MS2 19.68086 387.4 110 39.4702 9458 9458 9456 QEplus033719.raw F4 388.1 360.2 397.2 332.7 521.2 324.7 61 5.04 1 FALSE 1.14E-05 1.35E-12 2.352 -250 31985 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVTGVTR [R].qVTGVTR.[V] N-Term(TMT6plex) 3 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670; Q3UK68; Q60817 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2; NAC-A/B domain-containing protein OS=Mus musculus OX=10090 GN=Naca PE=2 SV=1; Nascent polypeptide-associated complex subunit alpha OS=Mus musculus OX=10090 GN=Naca PE=1 SV=1" 0 2 2 0.3441 0 1 1 1 495.30081 989.59435 989.59411 0.24 0.00012 0/0 0 0 197908736 HCD 30 MS2 32.64246 547.8 5.159 39.4725 9459 9459 9456 QEplus033719.raw F4 578.3 457.1 547.2 453.4 688.2 562.4 153 2.47 1 FALSE 0.001142 0.01521 0.33 -250 31995 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VKEDPDGEHAR [K].vkEDPDGEHAR.[R] N-Term(TMT6plex); K2(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; A0A3Q4EH91; Q9D0E1-2; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 1 4 4 0.6818 0 1 1 1 428.48544 1710.91994 1710.91752 1.42 0.00061 0/0 0 0 86691792 HCD 30 MS2 29.98403 587.7 16.744 39.4747 9460 9460 9456 QEplus033719.raw F4 590.9 556 620.2 488.5 709.8 560.6 373 3.52 1 FALSE 1.14E-05 4.80E-07 1.298 -250 31999 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VKEDPDGEHAR [K].vkEDPDGEHAR.[R] N-Term(TMT6plex); K2(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; A0A3Q4EH91; Q9D0E1-2; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 1 3 3 0.6744 0 1 1 1 570.97803 1710.91953 1710.91752 1.18 0.00067 0/0 0 0 22361070 HCD 30 MS2 30.99791 599.6 58.342 39.4792 9462 9462 9456 QEplus033719.raw F4 595 570.8 661.1 504.1 725.7 541.2 369 3.44 1 FALSE 1.14E-05 1.53E-08 1.582 -250 32007 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLQEDAAR [R].qLQEDAAR.[L] N-Term(TMT6plex) 4 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q3TTX2; Q62261; A0A0A0MQG2; Q62261-2 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 2 2 0.4806 0 1 1 1 580.31897 1159.63066 1159.62687 3.27 0.0019 0/0 0 0 12349066 HCD 30 MS2 14.12344 736.1 110 39.4818 9463 9463 9456 QEplus033719.raw F4 736.7 627.9 868 575.3 763.2 845.6 240 3.1 2 FALSE 1.14E-05 8.34E-05 0.872 -250 32017 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATSGTEHQFCGGR [R].aTSGTEHQFcGGR.[M] N-Term(TMT6plex); C10(Carbamidomethyl) 5 Q61398 Procollagen C-endopeptidase enhancer 1 OS=Mus musculus OX=10090 GN=Pcolce PE=1 SV=2 D3YWH0; Q3UN82; D3YZE3; Q61398; Q3TX39 Procollagen C-endopeptidase enhancer 1 (Fragment) OS=Mus musculus OX=10090 GN=Pcolce PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pcolce PE=2 SV=1; Procollagen C-endopeptidase enhancer 1 (Fragment) OS=Mus musculus OX=10090 GN=Pcolce PE=1 SV=1; Procollagen C-endopeptidase enhancer 1 OS=Mus musculus OX=10090 GN=Pcolce PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pcolce PE=2 SV=1 0 3 3 0.7603 0 1 1 1 546.26208 1636.7717 1636.76992 1.09 0.00059 0/0 0 0 9722347 HCD 30 MS2 34.23102 491.4 110 39.4843 9464 9464 9456 QEplus033719.raw F4 483.1 460.9 533.3 456.2 627.6 387.4 70 6.05 1 FALSE 1.14E-05 4.74E-11 2.059 -250 32025 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IEEGERPDR [R].iEEGERPDR.[A] N-Term(TMT6plex) 7 Q3TFC0 RNA helicase OS=Mus musculus OX=10090 GN=Mov10 PE=2 SV=1 Q3TFC0; P23249; D3YVL0; E9PW39; D3Z3E8; Q3UD86; Q69ZE2 RNA helicase OS=Mus musculus OX=10090 GN=Mov10 PE=2 SV=1; Putative helicase MOV-10 OS=Mus musculus OX=10090 GN=Mov10 PE=1 SV=2; RNA helicase OS=Mus musculus OX=10090 GN=Mov10 PE=1 SV=2; RNA helicase OS=Mus musculus OX=10090 GN=Mov10 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Mov10 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Mov10 PE=2 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Mov10 PE=2 SV=1 0 3 3 0.4167 0 1 1 1 443.90387 1329.69706 1329.69601 0.79 0.00035 0/0 0 0 9631179 HCD 30 MS2 61.84015 730.3 109.385 39.4867 9465 9465 9456 QEplus033719.raw F4 733.7 588.8 805.7 568.6 743.2 942 194 2.52 1 FALSE 0.001117 0.0148 0.335 -250 32029 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGYSYGSR [R].dGYSYGSR.[MS] N-Term(TMT6plex) 2 Q3TWW8 Serine/arginine-rich splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1 A0A0A6YXX6; Q3TWW8 Serine/arginine-rich-splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1; Serine/arginine-rich splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1 0 2 2 0.6107 0 1 1 1 567.2757 1133.54411 1133.54247 1.45 0.00082 0/0 0 0 9376551 HCD 30 MS2 35.74528 713.4 110 39.4892 9466 9466 9456 QEplus033719.raw F4 669.2 730.5 815.2 569.4 829.9 666.1 48 2.8 1 FALSE 1.14E-05 0.0003107 0.762 -250 32036 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YTQVGPDHNR [K].yTQVGPDHNR.[SW] N-Term(TMT6plex) 7 E9QNN1 DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1 O70133-2; Q3UR42; A0A087WRT3; E9QNN1; A0A0R4J2C3; A0A087WPL5; O70133 Isoform 2 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; DEAH box protein 9 (Fragment) OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; ATP-dependent RNA helicase A (Fragment) OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=2 0 3 3 0.6676 0 1 1 1 472.57983 1415.72495 1415.72289 1.45 0.00069 0/0 0 0 63178256 HCD 30 MS2 45.41053 460.6 18.708 39.5011 9470 9470 9467 QEplus033719.raw F4 417.9 399.3 506.2 373 553.7 513.2 170 3.43 1 FALSE 2.26E-05 0.0009835 0.664 -250 32045 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHPEFSTNR [K].gHPEFSTNR.[Q] N-Term(TMT6plex) 2 P56399 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 P56399; Q3U4W8 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 0 3 3 0.6618 0 1 1 1 425.22162 1273.6503 1273.64866 1.29 0.00055 0/0 0 0 18303538 HCD 30 MS2 24.83004 370.4 73.16 39.5056 9472 9472 9467 QEplus033719.raw F4 361.7 340.3 414.1 310.8 426.4 368.9 113 3.4 1 FALSE 7.59E-05 0.002749 0.567 -250 32054 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQTSMGMR [R].sQTSMGMR.[H] N-Term(TMT6plex) 4 Q8VCX5 "Calcium uptake protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Micu1 PE=1 SV=1" Q8VCX5; Q8VCX5-3; Q8VCX5-2; E9Q9E0 "Calcium uptake protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Micu1 PE=1 SV=1; Isoform 3 of Calcium uptake protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Micu1; Isoform 2 of Calcium uptake protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Micu1; Calcium uptake protein 1, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Micu1 PE=1 SV=1" 0 2 2 0.6014 0 1 1 1 563.78156 1126.55583 1126.55463 1.07 0.0006 0/0 0 0 14447074 HCD 30 MS2 10.29087 612.7 110 39.5081 9473 9473 9467 QEplus033719.raw F4 648.6 419.2 661 672.4 544.9 729.9 65 2.96 1 FALSE 1.14E-05 0.0002423 0.783 -250 32062 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DASAPGGPPER [K].dASAPGGPPER.[T] N-Term(TMT6plex) 3 Q7TQ95 Endoplasmic reticulum junction formation protein lunapark OS=Mus musculus OX=10090 GN=Lnpk PE=1 SV=1 Q7TQ95; A2ASM0; A2ASL8 Endoplasmic reticulum junction formation protein lunapark OS=Mus musculus OX=10090 GN=Lnpk PE=1 SV=1; Endoplasmic reticulum junction formation protein lunapark (Fragment) OS=Mus musculus OX=10090 GN=Lnpk PE=1 SV=8; Endoplasmic reticulum junction formation protein lunapark OS=Mus musculus OX=10090 GN=Lnpk PE=1 SV=1 0 2 2 0.6355 0 1 1 1 641.83374 1282.6602 1282.65889 1.02 0.00065 0/0 0 0 10579269 HCD 30 MS2 26.66839 386.9 110 39.5129 9475 9475 9467 QEplus033719.raw F4 387.8 347.4 386 300.1 514.8 385.4 201 3.32 1 FALSE 1.14E-05 9.20E-06 1.054 -250 32071 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMMAACDPR [K].nmMAAcDPR.[H] N-Term(TMT6plex); M2(Oxidation); C6(Carbamidomethyl) 14 Q7TMM9; P99024; P68372; Q9CWF2; Q3UMM1 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1;Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=1 SV=1 Q7TMM9; Q9D6F9; Q9CVR0; Q9ERD7; Q9CUN8; Q80ZV2; Q3U9U3; Q9CRT0; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2; Q3UMM1 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Tubulin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-3 chain OS=Mus musculus OX=10090 GN=Tubb3 PE=1 SV=1; Tubulin_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb6 PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=2 SV=1; Tubulin_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1; Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=1 SV=1 0 2 2 0.1467 0 1 1 1 655.79712 1310.58696 1310.58528 1.28 0.00084 0/0 0 0 9195525 HCD 30 MS2 19.66989 313 110 39.5177 9477 9477 9467 QEplus033719.raw F4 313.2 264.8 365.4 253.4 366.2 315.1 18 1.5 5 FALSE 0.003278 0.06373 0.104 -250 32076 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EALTTR [R].eALTTR.[AQ] N-Term(TMT6plex) 7 C0LQ87; F8WHM5 Syncoilin isoform 2 OS=Mus musculus OX=10090 GN=Sync PE=2 SV=1;Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 C0LQ88; C0LQ87; F8WHM5; Q9EPM5-2; Q61543; Q9EPM5-3; Q9EPM5 Syncoilin isoform 3 OS=Mus musculus OX=10090 GN=Sync PE=2 SV=1; Syncoilin isoform 2 OS=Mus musculus OX=10090 GN=Sync PE=2 SV=1; Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Isoform 2 of Syncoilin OS=Mus musculus OX=10090 GN=Sync; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Isoform 3 of Syncoilin OS=Mus musculus OX=10090 GN=Sync; Syncoilin OS=Mus musculus OX=10090 GN=Sync PE=1 SV=1 0 2 2 0.3971 0 1 1 2 460.2746 919.54192 919.54101 0.99 0.00045 0/0 0 0 53666164 HCD 30 MS2 8.395941 540.3 23.844 39.525 9479 9479 9478 QEplus033719.raw F4 576.4 367 546 585.5 570.6 596.6 86 2.04 2 FALSE 0.004699 0.08254 0.055 -250 32081 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYYASR [R].dYYASR.[S] N-Term(TMT6plex) 2 P60824 Cold-inducible RNA-binding protein OS=Mus musculus OX=10090 GN=Cirbp PE=1 SV=1 P60824; K4DI65 Cold-inducible RNA-binding protein OS=Mus musculus OX=10090 GN=Cirbp PE=1 SV=1; Cold-inducible RNA-binding protein OS=Mus musculus OX=10090 GN=Cirbp PE=1 SV=1 0 2 2 0.3229 0 1 1 1 502.25616 1003.50505 1003.50463 0.42 0.00021 0/0 0 0 3498063.25 HCD 30 MS2 51.53543 643.7 110 39.5275 9480 9480 9478 QEplus033719.raw F4 622 529 689.3 575.9 738.9 707.3 52 2.23 1 FALSE 0.002249 0.04415 0.16 -250 32090 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DACLNAR [R].dAcLNAR.[C] N-Term(TMT6plex); C3(Carbamidomethyl) 3 O55143-2; O55143 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2 O55143-2; O55143; Q5DTI2 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1 0 2 2 0.4248 0 1 1 1 524.77472 1048.54216 1048.54069 1.4 0.00073 0/0 0 0 133038680 HCD 30 MS2 5.230221 585.7 10.363 39.5297 9481 9481 9478 QEplus033719.raw F4 653.1 264.7 506.7 973 340.5 776.1 189 2.66 2 FALSE 0.001108 0.01457 0.338 -250 32096 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IYPGHGR [K].iYPGHGR.[R] N-Term(TMT6plex) 4 Q3UW40 TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1 Q3UW40; Q8BT08; Q8BP67; Q9CS31 TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1; TRASH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1; 60S ribosomal protein L24 OS=Mus musculus OX=10090 GN=Rpl24 PE=1 SV=2; TRASH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1 0 2 2 0.3902 0 1 1 1 514.79419 1028.5811 1028.58388 -2.7 -0.00139 0/0 0 0 26294444 HCD 30 MS2 13.11268 566.8 35.334 39.532 9482 9482 9478 QEplus033719.raw F4 483.3 429 626.7 521.3 613 727.6 92 2.05 1 FALSE 0.001456 0.02099 0.273 -250 32107 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLESSESR [R].kLESSESR.[S] N-Term(TMT6plex); K1(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 1 3 3 0.3611 0 1 1 1 465.2739 1393.80713 1393.80511 1.45 0.00067 0/0 0 0 17826386 HCD 30 MS2 49.02322 860.6 55.262 39.5365 9484 9484 9478 QEplus033719.raw F4 1654.1 555.8 801.6 768.8 702.2 681.3 426 2.52 1 FALSE 0.001231 0.01665 0.314 -250 32129 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MAGDETQPTR [R].mAGDETQPTR.[F] N-Term(TMT6plex) 5 A0A1B0GSB4 Splicing regulatory glutamine/lysine-rich protein 1 OS=Mus musculus OX=10090 GN=Srek1 PE=1 SV=1 A0A1B0GSB4; Q8BZX4; Q8BZX4-2; A0A1B0GSR3; Q6P3Z1 Splicing regulatory glutamine/lysine-rich protein 1 OS=Mus musculus OX=10090 GN=Srek1 PE=1 SV=1; Splicing regulatory glutamine/lysine-rich protein 1 OS=Mus musculus OX=10090 GN=Srek1 PE=2 SV=1; Isoform 2 of Splicing regulatory glutamine/lysine-rich protein 1 OS=Mus musculus OX=10090 GN=Srek1; Splicing regulatory glutamine/lysine-rich protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Srek1 PE=1 SV=1; Sfrs12 protein (Fragment) OS=Mus musculus OX=10090 GN=Srek1 PE=2 SV=1 0 2 2 0.5329 0 1 1 1 667.83331 1334.65935 1334.65718 1.63 0.00108 0/0 0 0 7277175.5 HCD 30 MS2 10.04024 276.4 110 39.544 9487 9487 9478 QEplus033719.raw F4 283.2 285.6 300 208.4 323.9 257.4 133 3.34 1 FALSE 1.14E-05 3.37E-06 1.137 -250 32135 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YTAVQR [K].yTAVQR.[N] N-Term(TMT6plex) 8 O70305; F6U2C2 Ataxin-2 OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1;Ataxin-2 (Fragment) OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1 O70305-3; Q3UX07; A0A286YDU2; O70305; E9QM77; O70305-2; F7B6X4; F6U2C2 Isoform 3 of Ataxin-2 OS=Mus musculus OX=10090 GN=Atxn2; LsmAD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Atxn2 PE=2 SV=1; Ataxin-2 (Fragment) OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1; Ataxin-2 OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1; Ataxin-2 OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1; Isoform 2 of Ataxin-2 OS=Mus musculus OX=10090 GN=Atxn2; Ataxin-2 (Fragment) OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1; Ataxin-2 (Fragment) OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1 0 2 2 0.2619 0 1 1 1 483.78293 966.55858 966.557 1.64 0.00079 0/0 0 0 6964921 HCD 30 MS2 42.47358 925.2 110 39.5465 9488 9488 9478 QEplus033719.raw F4 912.6 724.3 1036.3 742.3 1151.2 984.7 94 1.68 2 FALSE 0.007754 0.1266 -0.054 -250 32145 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLETEQREEQCR [K].qLETEQREEQcR.[E] N-Term(TMT6plex); C11(Carbamidomethyl) 4 Q3UZN6 Phosducin domain-containing protein OS=Mus musculus OX=10090 GN=Pdcl PE=2 SV=1 Q3UZN6; Q923E8; Q9DBX2; A2AVP3 Phosducin domain-containing protein OS=Mus musculus OX=10090 GN=Pdcl PE=2 SV=1; Phosducin-like OS=Mus musculus OX=10090 GN=Pdcl PE=2 SV=1; Phosducin-like protein OS=Mus musculus OX=10090 GN=Pdcl PE=1 SV=1; Phosducin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Pdcl PE=1 SV=1 1 3 3 0.6413 0 1 1 1 612.30243 1834.89273 1834.89149 0.68 0.00041 0/0 0 0 6038230 HCD 30 MS2 12.16402 205.3 110 39.5563 9491 9491 9489 QEplus033719.raw F4 217.4 194.6 228.5 164.5 232.4 194.1 134 3.15 1 FALSE 1.14E-05 3.74E-07 1.318 -250 32178 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEYAEAR [R].eAEYAEAR.[R] N-Term(TMT6plex) 3 A2AA85 SUZ domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Szrd1 PE=1 SV=1 A2AA85; Q6NXN1-2; Q6NXN1 SUZ domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Szrd1 PE=1 SV=1; Isoform 2 of SUZ domain-containing protein 1 OS=Mus musculus OX=10090 GN=Szrd1; SUZ domain-containing protein 1 OS=Mus musculus OX=10090 GN=Szrd1 PE=1 SV=1 0 2 2 0.5898 0 1 1 1 584.29706 1167.58684 1167.58433 2.15 0.00125 0/0 0 0 11561066 HCD 30 MS2 45.35745 701.8 110 39.5701 9497 9497 9489 QEplus033719.raw F4 775.5 560.6 719.3 515.6 931.5 708.5 114 2.95 1 FALSE 1.14E-05 9.16E-05 0.864 -250 32191 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRPGPAGPPGSQGPR [R].gRPGPAGPPGSQGPR.[G] N-Term(TMT6plex) 2 Q3U962 Collagen alpha-2(V) chain OS=Mus musculus OX=10090 GN=Col5a2 PE=1 SV=1 Q3U962; Q8BNA3 Collagen alpha-2(V) chain OS=Mus musculus OX=10090 GN=Col5a2 PE=1 SV=1; VWFC domain-containing protein OS=Mus musculus OX=10090 GN=Col5a2 PE=2 SV=1 0 3 3 0.7593 0 1 1 1 539.63275 1616.8837 1616.88185 1.14 0.00062 0/0 0 0 9698747 HCD 30 MS2 7.231729 356.3 110 39.5751 9499 9499 9489 QEplus033719.raw F4 343.4 372 404.1 168.7 501.1 348.4 387 5.4 1 FALSE 1.14E-05 1.12E-12 2.367 -250 32198 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNVNDGVAQSTR [K].sNVNDGVAQSTR.[I] N-Term(TMT6plex) 3 P17751 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5 H7BXC3; P17751; P17751-2 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=1; Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5; Isoform 2 of Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 0 2 2 0.7539 0 1 1 1 738.88525 1476.76323 1476.7604 1.92 0.00142 0/0 0 0 14213954 HCD 30 MS2 10.56101 302.5 110 39.5824 9501 9501 9500 QEplus033719.raw F4 340.4 191 296.7 361.5 248.3 377.3 225 4.51 1 FALSE 1.14E-05 6.37E-11 2.034 -250 32205 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CSHALIR [R].cSHALIR.[G] N-Term(TMT6plex); C1(Carbamidomethyl) 4 Q99LD8 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1" Q99LD8; A4FUQ8; G3UZR0; O08972 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1; Dimethylargininase (Fragment) OS=Mus musculus OX=10090 GN=Ddah2 PE=2 SV=1; Dimethylargininase (Fragment) OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1; Dimethylargininase OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1" 0 3 3 0.4626 0 1 1 1 362.54153 1085.61005 1085.60871 1.23 0.00045 0/0 0 0 19852262 HCD 30 MS2 41.02609 420.7 57.139 39.5847 9502 9502 9500 QEplus033719.raw F4 575.4 322.3 484.5 311.6 394.9 435.7 148 2.81 1 FALSE 3.35E-05 0.001241 0.643 -250 32213 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDVGQPQPGR [R].eDVGQPQPGR.[E] N-Term(TMT6plex) 2 Q9WVA4 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4 Q9WVA4; A0A0A6YXG6 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4; Transgelin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=1 0 2 2 0.7653 0 1 1 1 656.34705 1311.68682 1311.68544 1.05 0.00069 0/0 0 0 61802232 HCD 30 MS2 40.44233 560.7 32.092 39.5892 9504 9504 9500 QEplus033719.raw F4 578.6 570.9 595.9 378.3 768.9 471.7 220 2.77 1 FALSE 1.14E-05 1.35E-05 1.023 -250 32234 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDQELSSTAR [K].gDQELSSTAR.[L] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.6541 0 1 1 1 646.8385 1292.66973 1292.66437 4.14 0.00268 0/0 0 0 8093596.5 HCD 30 MS2 26.39556 420.4 110 39.5963 9507 9507 9500 QEplus033719.raw F4 484.4 167.2 337.7 708.3 214.5 610.1 209 3.18 2 FALSE 1.14E-05 3.01E-07 1.337 -250 32239 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSAESER [R].lSAESER.[L] N-Term(TMT6plex) 7 B2RQ83 Gem (Nuclear organelle) associated protein 5 OS=Mus musculus OX=10090 GN=Gemin5 PE=2 SV=1 B2RQ83; B7ZN04; E9PUU4; A2AFQ9; Q6KAS0; Q3TR97; Q8BX17 Gem (Nuclear organelle) associated protein 5 OS=Mus musculus OX=10090 GN=Gemin5 PE=2 SV=1; Gemin5 protein OS=Mus musculus OX=10090 GN=Gemin5 PE=2 SV=1; Gem-associated protein 5 OS=Mus musculus OX=10090 GN=Gemin5 PE=1 SV=1; Gem-associated protein 5 OS=Mus musculus OX=10090 GN=Gemin5 PE=1 SV=1; MFLJ00137 protein (Fragment) OS=Mus musculus OX=10090 GN=Gemin5 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gemin5 PE=2 SV=1; Gem-associated protein 5 OS=Mus musculus OX=10090 GN=Gemin5 PE=1 SV=2 0 2 2 0.2015 0 1 1 1 510.77966 1020.55205 1020.5523 -0.25 -0.00013 0/0 0 0 7458445.5 HCD 30 MS2 45.42678 600.8 110 39.5988 9508 9508 9500 QEplus033719.raw F4 641.1 501.9 613.3 503.9 712 632.6 191 2.68 1 FALSE 4.43E-05 0.00154 0.623 -250 32248 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTSYAQHQQVR [R].kTSYAQHQQVR.[Q] N-Term(TMT6plex); K1(TMT6plex) 5 P97351 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3 Q3UJU5; P97351; Q3U5P8; Q3UAC2; Q9D1S3 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1 1 3 3 0.7466 0 1 1 1 602.01294 1804.02427 1804.02299 0.71 0.00043 0/0 0 0 7432601.5 HCD 30 MS2 17.08668 457.1 110 39.6013 9509 9509 9500 QEplus033719.raw F4 449.4 460.4 518.2 461.9 551.1 301.8 467 4.38 1 FALSE 1.14E-05 5.66E-11 2.044 -250 32254 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLESSESR [R].kLESSESR.[S] N-Term(TMT6plex); K1(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 1 2 2 0.2857 0 1 1 1 697.40735 1393.80742 1393.80511 1.65 0.00115 0/0 0 0 7203094 HCD 30 MS2 17.47567 222.7 110 39.6038 9510 9510 9500 QEplus033719.raw F4 494.2 151.3 186.8 186.1 161.8 156.2 423 2.24 1 FALSE 0.0002719 0.005534 0.489 -250 32261 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LNPNASR [R].lNPNASR.[K] N-Term(TMT6plex) 1 Q148S3 RNA-binding protein NOB1 OS=Mus musculus OX=10090 GN=Nob1 PE=2 SV=1 Q148S3 RNA-binding protein NOB1 OS=Mus musculus OX=10090 GN=Nob1 PE=2 SV=1 0 2 2 0.4585 0 1 1 1 500.79077 1000.57427 1000.57371 0.56 0.00028 0/0 0 0 6426947.5 HCD 30 MS2 60.16048 572.1 110 39.6112 9512 9512 9511 QEplus033719.raw F4 575.2 486.7 641.1 423.2 680.9 625.2 98 2.05 1 FALSE 0.00315 0.0617 0.109 -250 32271 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHPEFSTNR [K].gHPEFSTNR.[Q] N-Term(TMT6plex) 2 P56399 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 P56399; Q3U4W8 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 0 2 2 0.6374 0 1 1 1 637.32965 1273.65203 1273.64866 2.64 0.00168 0/0 0 0 3789456.5 HCD 30 MS2 0 257.7 110 39.6137 9513 9513 9511 QEplus033719.raw F4 271.1 227.3 262.8 244.3 310.6 230.3 129 2.62 1 FALSE 1.14E-05 8.27E-06 1.063 -250 32283 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDDSSGSIGRR [K].vDDSSGSIGRR.[Y] N-Term(TMT6plex) 1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 1 3 3 0.6659 0 1 1 1 459.91479 1377.72983 1377.72837 1.06 0.00049 0/0 0 0 49688884 HCD 30 MS2 28.09892 403.4 20.537 39.6227 9517 9517 9511 QEplus033719.raw F4 458.7 345.8 443.2 337.9 465.3 369.6 289 4.37 1 FALSE 1.14E-05 1.48E-09 1.775 -250 32292 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTSYAQHQQVR [R].kTSYAQHQQVR.[Q] N-Term(TMT6plex); K1(TMT6plex) 5 P97351 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3 Q3UJU5; P97351; Q3U5P8; Q3UAC2; Q9D1S3 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1 1 4 4 0.7401 0 1 1 1 451.7616 1804.02456 1804.02299 0.87 0.00039 0/0 0 0 29371272 HCD 30 MS2 15.66346 325.4 33.806 39.6249 9518 9518 9511 QEplus033719.raw F4 311.8 337.6 328.3 336.4 429.2 208.9 469 6.04 1 FALSE 1.14E-05 6.32E-08 1.465 -250 32315 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDVGQPQPGR [R].eDVGQPQPGR.[E] N-Term(TMT6plex) 2 Q9WVA4 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4 Q9WVA4; A0A0A6YXG6 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4; Transgelin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=1 0 3 3 0.6792 0 1 1 1 437.9006 1311.68726 1311.68544 1.38 0.00061 0/0 0 0 18498904 HCD 30 MS2 32.54374 394.8 67.733 39.6317 9521 9521 9511 QEplus033719.raw F4 444 331.7 392.9 339.2 471.8 389 214 3.18 1 FALSE 1.14E-05 0.0001795 0.808 -250 32318 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HYCDSEKPR [R].hYcDSEkPR.[C] N-Term(TMT6plex); C3(Carbamidomethyl); K7(TMT6plex) 8 Q3ULB1 Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1 Q99L61; P47226-2; A2ALC6; P47226; Q3ULB1; Q921W7; Q3V085; B1AXB9 Testin OS=Mus musculus OX=10090 GN=Tes PE=2 SV=1; Isoform TES1 of Testin OS=Mus musculus OX=10090 GN=Tes; Testin OS=Mus musculus OX=10090 GN=Tesl2 PE=3 SV=1; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=2; Testin OS=Mus musculus OX=10090 GN=Tesl1 PE=2 SV=1; Testin OS=Mus musculus OX=10090 GN=Tesl1 PE=1 SV=1 0 4 4 0.6189 0 1 1 1 413.21762 1649.84865 1649.847 1 0.00041 0/0 0 0 16293594 HCD 30 MS2 35.08053 548 98.133 39.639 9523 9523 9522 QEplus033719.raw F4 623.2 503 498.1 485.3 781.7 396.7 259 3.49 1 FALSE 1.14E-05 1.99E-05 0.991 -250 32327 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REPALATR [R].rEPALATR.[D] N-Term(TMT6plex) 3 B2RWW1 Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=2 SV=1 B2RWW1; A0A1D5RLY6; Q8C052 Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=2 SV=1; Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=1 SV=1; Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=1 SV=2 1 3 3 0.5561 0 1 1 1 381.56631 1142.68439 1142.68432 0.06 0.00002 0/0 0 0 13662553 HCD 30 MS2 60.30968 374.9 66.185 39.6412 9524 9524 9522 QEplus033719.raw F4 488.6 257.6 388.1 301.6 357.7 455.5 251 3.83 1 FALSE 1.14E-05 0.0003748 0.747 -250 32337 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEGSDLCDR [K].tEGSDLcDR.[V] N-Term(TMT6plex); C7(Carbamidomethyl) 5 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q99LY0; Q91YQ5; Q5RKP4; Q3U900; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 0 2 2 0.6506 0 1 1 1 641.30164 1281.59599 1281.59425 1.36 0.00087 0/0 0 0 19363672 HCD 30 MS2 16.55697 727.3 110 39.646 9526 9526 9522 QEplus033719.raw F4 704.3 680 818.9 599 852.7 709.1 41 3.52 1 FALSE 1.14E-05 5.24E-06 1.101 -250 32379 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVTYQGQR [K].qVTYQGQR.[V] N-Term(TMT6plex) 6 Q3UDG8 Calcium-activated neutral proteinase 1 OS=Mus musculus OX=10090 GN=Capn1 PE=2 SV=1 Q3UDG8; Q3UF24; Q8C2J1; Q80Y25; Q3TI07; Q3TB79 Calcium-activated neutral proteinase 1 OS=Mus musculus OX=10090 GN=Capn1 PE=2 SV=1; Calcium-activated neutral proteinase 1 (Fragment) OS=Mus musculus OX=10090 GN=Capn1 PE=2 SV=1; Calcium-activated neutral proteinase 1 OS=Mus musculus OX=10090 GN=Capn1 PE=2 SV=1; Calcium-activated neutral proteinase 1 OS=Mus musculus OX=10090 GN=Capn1 PE=2 SV=1; Calcium-activated neutral proteinase 1 OS=Mus musculus OX=10090 GN=Capn1 PE=1 SV=1; Calcium-activated neutral proteinase 1 (Fragment) OS=Mus musculus OX=10090 GN=Capn1 PE=2 SV=1 0 2 2 0.5201 0 1 1 1 604.83826 1208.66924 1208.6585 8.88 0.00537 0/0 0 0 7139365.5 HCD 30 MS2 37.44032 718 110 39.6608 9532 9532 9522 QEplus033719.raw F4 815.8 526.2 746.3 756.8 625.2 837.4 300 2.98 1 FALSE 1.14E-05 0.0004178 0.737 -250 32389 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAEELR [K].tAEELR.[L] N-Term(TMT6plex) 1 Q8VCW8 "Medium-chain acyl-CoA ligase ACSF2, mitochondrial OS=Mus musculus OX=10090 GN=Acsf2 PE=1 SV=1" Q8VCW8 "Medium-chain acyl-CoA ligase ACSF2, mitochondrial OS=Mus musculus OX=10090 GN=Acsf2 PE=1 SV=1" 0 2 2 0.1577 0 1 1 1 474.27191 947.53655 947.53593 0.65 0.00031 0/0 0 0 17204424 HCD 30 MS2 25.4937 843.6 80.9 39.6681 9534 9534 9533 QEplus033719.raw F4 960 675.4 926.7 736.7 821.8 940.8 175 2.22 1 FALSE 0.002249 0.04395 0.161 -250 32398 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSLGTSGETCR [R].gSLGTSGETcR.[C] N-Term(TMT6plex); C10(Carbamidomethyl) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.7302 0 1 1 1 677.33618 1353.66509 1353.66299 1.55 0.00105 0/0 0 0 22134538 HCD 30 MS2 2.28463 500.7 110 39.6706 9535 9535 9533 QEplus033719.raw F4 485.7 466.2 698.9 469.3 344.4 539.9 111 3.41 2 FALSE 1.14E-05 1.78E-08 1.57 -250 32407 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERELEEAR [K].eRELEEAR.[K] N-Term(TMT6plex) 15 A0A1L1SQ51; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1;Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q68FD6; A0A1L1SRI1; Q80TM2; A0A1L1SQ51; B2RY15; Q9CS79; Q6PB69; Q8CHG4; Q8CDM9; A0A1L1SQP9; Q0V930; Q3UHS6; Q3TBC3; E9PUM4; P26039 Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Tln2 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; MKIAA0320 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 1 3 3 0.3245 0 1 1 1 420.89664 1260.67536 1260.67454 0.64 0.00027 0/0 0 0 60557416 HCD 30 MS2 13.1312 395.6 21.507 39.6751 9537 9537 9533 QEplus033719.raw F4 412.5 352.9 451.8 298.9 479.1 378.6 301 3.39 2 FALSE 5.44E-05 0.002562 0.574 -250 32412 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STVPVR [K].sTVPVR.[A] N-Term(TMT6plex) 6 Q3TS38 UDP-glucose 6-dehydrogenase OS=Mus musculus OX=10090 GN=Ugdh PE=1 SV=1 Q3TS38; Q3TJ71; Q3TI06; Q3TJE8; D3YXP9; Q3UIZ1 UDP-glucose 6-dehydrogenase OS=Mus musculus OX=10090 GN=Ugdh PE=1 SV=1; UDP-glucose 6-dehydrogenase OS=Mus musculus OX=10090 GN=Ugdh PE=2 SV=1; UDP-glucose 6-dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ugdh PE=2 SV=1; UDP-glucose 6-dehydrogenase OS=Mus musculus OX=10090 GN=Ugdh PE=2 SV=1; UDP-glucose 6-dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ugdh PE=1 SV=8; UDP-glucose 6-dehydrogenase OS=Mus musculus OX=10090 GN=Ugdh PE=2 SV=1 0 2 2 0.0685 0 1 1 1 444.27963 887.55199 887.55118 0.91 0.0004 0/0 0 0 37837412 HCD 30 MS2 14.52441 687.3 35.053 39.6796 9539 9539 9533 QEplus033719.raw F4 642.5 715.6 720.5 479 944.3 621.8 164 2.19 1 FALSE 0.003708 0.07094 0.085 -250 32428 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGDAEFNR [R].qGDAEFNR.[I] N-Term(TMT6plex) 5 Q3ULT2 Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1 Q3UDJ7; Q3ULT2; Q8BP35; Q61064; Q1A602 Uncharacterized protein OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Alpha-actinin (Fragment) OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1 0 2 2 0.5444 0 1 1 1 583.29449 1165.58171 1165.57992 1.54 0.0009 0/0 0 0 15611431 HCD 30 MS2 0 669.6 110 39.6867 9542 9542 9533 QEplus033719.raw F4 610.4 665.6 783.9 491.7 768.7 697.2 117 2.59 1 FALSE 0.0001401 0.003225 0.551 -250 32435 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERELEEAR [K].eRELEEAR.[K] N-Term(TMT6plex) 15 A0A1L1SQ51; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1;Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q68FD6; A0A1L1SRI1; Q80TM2; A0A1L1SQ51; B2RY15; Q9CS79; Q6PB69; Q8CHG4; Q8CDM9; A0A1L1SQP9; Q0V930; Q3UHS6; Q3TBC3; E9PUM4; P26039 Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Tln2 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; MKIAA0320 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 1 2 2 0.4016 0 1 1 1 630.84131 1260.67534 1260.67454 0.63 0.0004 0/0 0 0 11642357 HCD 30 MS2 20.36364 242.5 110 39.6892 9543 9543 9533 QEplus033719.raw F4 257.9 227 263.2 180.1 274.5 252 301 2.44 2 FALSE 0.0001603 0.003566 0.54 -250 32456 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNCWPR [K].rNcWPR.[V] N-Term(TMT6plex); C3(Carbamidomethyl) 3 P62918 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2 Q3UJS0; P62918; Q3THC7 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1 1 3 3 0.1612 0 1 1 1 373.20157 1117.59015 1117.58865 1.35 0.0005 0/0 0 0 107799896 HCD 30 MS2 37.68364 365.6 9.156 39.7012 9547 9547 9544 QEplus033719.raw F4 448.8 281.2 414 302.4 386.7 360.7 186 2.73 1 FALSE 0.002056 0.03712 0.185 -250 32463 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAHFVR [R].eAHFVR.[T] N-Term(TMT6plex) 3 Q9CQM8 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=1 Q4VA28; Q9CQM8; O09167 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=2 SV=1; 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=1; 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=3 0 2 2 0.3378 0 1 1 1 494.28217 987.55705 987.55733 -0.28 -0.00014 0/0 0 0 98185864 HCD 30 MS2 6.825083 528.1 12.387 39.7035 9548 9548 9544 QEplus033719.raw F4 544 386.7 548.9 610.4 536.4 542.3 168 2.22 1 FALSE 0.005488 0.09299 0.026 -250 32466 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFDAQTGADR [K].rFDAQTGADR.[E] N-Term(TMT6plex) 8 Q569X4 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1 A0A140LIZ5; Q569X4; Q3TJ97; Q52L53; Q3TUN5; Q3UBF0; Q3TFA5; P54775 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=1 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; Psmc4 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 (Fragment) OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome regulatory subunit 6B OS=Mus musculus OX=10090 GN=Psmc4 PE=1 SV=2 1 3 3 0.6005 0 1 1 1 455.90781 1365.70887 1365.70724 1.19 0.00054 0/0 0 0 52452072 HCD 30 MS2 48.10248 480.8 15.421 39.7058 9549 9549 9544 QEplus033719.raw F4 374.2 399.4 608.5 532.8 462.3 507.8 240 3.88 1 FALSE 1.14E-05 1.85E-07 1.377 -250 32472 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQFEDRN [K].aQFEDRN.[-] N-Term(TMT6plex) 2 Q99LT0 Protein dpy-30 homolog OS=Mus musculus OX=10090 GN=Dpy30 PE=1 SV=1 Q99LT0; Q7TQ15 Protein dpy-30 homolog OS=Mus musculus OX=10090 GN=Dpy30 PE=1 SV=1; Dosage compensation-related protein DPY30 OS=Mus musculus OX=10090 GN=Dpy30 PE=2 SV=1 1 2 2 0.5945 0 1 1 1 554.78339 1108.5595 1108.55845 0.94 0.00052 0/0 0 0 34875144 HCD 30 MS2 30.68203 725 44.005 39.708 9550 9550 9544 QEplus033719.raw F4 711 769 762.6 478.3 940.7 688.4 137 2.54 1 FALSE 0.001702 0.02816 0.226 -250 32480 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDAIGPR [R].sDAIGPR.[E] N-Term(TMT6plex) 2 Q78P92 FSHD Region Gene 1 protein OS=Mus musculus OX=10090 GN=Frg1 PE=1 SV=1 Q78P92; Q3V3M3 FSHD Region Gene 1 protein OS=Mus musculus OX=10090 GN=Frg1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Frg1 PE=2 SV=1 0 2 2 0.4906 0 1 1 1 472.77191 944.53655 944.53626 0.3 0.00014 0/0 0 0 17884662 HCD 30 MS2 38.40767 1098.3 110 39.7105 9551 9551 9544 QEplus033719.raw F4 1308.7 991.3 1187.4 826.7 1193.3 1082.7 147 2.12 1 FALSE 0.001762 0.0301 0.216 -250 32503 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSMSETVR [K].nSMSETVR.[L] N-Term(TMT6plex) 2 Q9D0F3 Protein ERGIC-53 OS=Mus musculus OX=10090 GN=Lman1 PE=1 SV=1 Q9D0F3; Q3U944 Protein ERGIC-53 OS=Mus musculus OX=10090 GN=Lman1 PE=1 SV=1; L-type lectin-like domain-containing protein OS=Mus musculus OX=10090 GN=Lman1 PE=2 SV=1 0 2 2 0.6331 0 1 1 1 576.79865 1152.59001 1152.58804 1.71 0.00099 0/0 0 0 14782083 HCD 30 MS2 0 930 110 39.7176 9554 9554 9544 QEplus033719.raw F4 862.4 909.1 1074.3 756 1015.8 962.5 133 2.78 1 FALSE 0.001028 0.01343 0.353 -250 32509 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDDSSGSIGRR [K].vDDSSGSIGRR.[Y] N-Term(TMT6plex) 1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 1 2 2 0.5097 0 1 1 1 689.36884 1377.73039 1377.72837 1.47 0.00101 0/0 0 0 11151423 HCD 30 MS2 0 145.6 110 39.7274 9557 9557 9555 QEplus033719.raw F4 158.3 114.4 160.6 124.5 166.6 148.9 313 3.08 1 FALSE 1.14E-05 3.07E-05 0.955 -250 32521 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELEAER [RK].eLEAER.[QFWS] N-Term(TMT6plex) 13 B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 B7ZNF6; A2A5Z4; A0A1W2P7Y0; O35927-2; P14873; A0A1W2P841; Q9D279; Q8BVV7; Q14B65; B2RQQ5; O35927; E9QKH8; A0A2I3BQV7 Catenin delta-2 OS=Mus musculus OX=10090 GN=Ctnnd2 PE=1 SV=1; Centrosomal protein of 95 kDa (Fragment) OS=Mus musculus OX=10090 GN=Cep95 PE=1 SV=1; Mitotic interactor and substrate of PLK1 (Fragment) OS=Mus musculus OX=10090 GN=Misp PE=1 SV=1; Isoform 2 of Catenin delta-2 OS=Mus musculus OX=10090 GN=Ctnnd2; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=1 SV=2; Mitotic interactor and substrate of PLK1 (Fragment) OS=Mus musculus OX=10090 GN=Misp PE=1 SV=1; Mitotic interactor and substrate of PLK1 OS=Mus musculus OX=10090 GN=Misp PE=1 SV=1; Centrosomal protein of 95 kDa OS=Mus musculus OX=10090 GN=Cep95 PE=1 SV=2; Ccdc45 protein OS=Mus musculus OX=10090 GN=Cep95 PE=1 SV=1; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Catenin delta-2 OS=Mus musculus OX=10090 GN=Ctnnd2 PE=1 SV=1; Catenin delta-2 OS=Mus musculus OX=10090 GN=Ctnnd2 PE=1 SV=1; Catenin delta-2 OS=Mus musculus OX=10090 GN=Ctnnd2 PE=1 SV=1 0 2 2 0.1561 0 1 1 1 488.26941 975.53154 975.53084 0.72 0.00035 0/0 0 0 33010982 HCD 30 MS2 62.35249 674.1 27.167 39.7319 9559 9559 9555 QEplus033719.raw F4 765.5 532.4 671.8 547.2 819 708.4 180 2.37 1 FALSE 0.002758 0.05444 0.129 -250 32533 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQLEEAQR [R].qQLEEAQR.[A] N-Term(TMT6plex) 5 E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" A0A087WS16; Q99K31; J3QQ16; O88493; E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Col6a3 protein (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Type VI collagen alpha 3 subunit OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" 0 2 2 0.585 0 1 1 1 615.83624 1230.66521 1230.66398 1 0.00061 0/0 0 0 15584975 HCD 30 MS2 16.72054 618.8 110 39.7369 9561 9561 9555 QEplus033719.raw F4 676.3 614.3 503.7 523.5 824.3 570.7 285 3.06 1 FALSE 1.14E-05 9.33E-05 0.863 -250 32540 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FQNACR [R].fQNAcR.[D] N-Term(TMT6plex); C5(Carbamidomethyl) 4 Q08024; Q08024-2 Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb PE=1 SV=1;Isoform 2 of Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb Q08024; Q08024-3; Q08024-4; Q08024-2 Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb PE=1 SV=1; Isoform 3 of Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb; Isoform 4 of Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb; Isoform 2 of Core-binding factor subunit beta OS=Mus musculus OX=10090 GN=Cbfb 0 2 2 0.5607 0 1 1 1 512.76416 1024.52104 1024.51957 1.44 0.00074 0/0 0 0 11328197 HCD 30 MS2 28.61777 891.1 110 39.7394 9562 9562 9555 QEplus033719.raw F4 1179.8 651.2 765.2 772.4 1207.6 770.6 117 2.14 2 FALSE 0.002182 0.04183 0.168 -250 32559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDDTQASR [K].lDDTQASR.[K] N-Term(TMT6plex) 3 Q8R3N6 THO complex subunit 1 OS=Mus musculus OX=10090 GN=Thoc1 PE=1 SV=1 Q8R3N6; A0A3Q4EBV8; Q3UTN0 THO complex subunit 1 OS=Mus musculus OX=10090 GN=Thoc1 PE=1 SV=1; THO complex subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Thoc1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Thoc1 PE=2 SV=1 0 2 2 0.4496 0 1 1 1 567.80219 1134.59709 1134.59523 1.64 0.00093 0/0 0 0 7423445 HCD 30 MS2 35.04376 482 110 39.7441 9564 9564 9555 QEplus033719.raw F4 486.9 414.2 498.9 377 594.6 520.2 227 2.78 1 FALSE 1.14E-05 0.0001195 0.842 -250 32568 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TFAQNCR [RK].tFAQNcR.[N] N-Term(TMT6plex); C6(Carbamidomethyl) 6 A2A533 F-box/LRR-repeat protein 20 (Fragment) OS=Mus musculus OX=10090 GN=Fbxl20 PE=1 SV=1 A2A533; Q9CZV8-4; Q9CZV8; Q8BH16; Q9CZV8-3; Q3TQM5 F-box/LRR-repeat protein 20 (Fragment) OS=Mus musculus OX=10090 GN=Fbxl20 PE=1 SV=1; Isoform 2 of F-box/LRR-repeat protein 20 OS=Mus musculus OX=10090 GN=Fbxl20; F-box/LRR-repeat protein 20 OS=Mus musculus OX=10090 GN=Fbxl20 PE=1 SV=3; F-box/LRR-repeat protein 2 OS=Mus musculus OX=10090 GN=Fbxl2 PE=1 SV=1; Isoform 3 of F-box/LRR-repeat protein 20 OS=Mus musculus OX=10090 GN=Fbxl20; F-box domain-containing protein OS=Mus musculus OX=10090 GN=Fbxl2 PE=2 SV=1 0 2 2 0.4866 0 1 1 1 563.28857 1125.56987 1125.56724 2.34 0.00131 0/0 0 0 4974907.5 HCD 30 MS2 17.89653 451.8 110 39.7466 9565 9565 9555 QEplus033719.raw F4 423.9 418.3 506.4 369.1 504.3 488.9 101 2.24 1 FALSE 0.001421 0.02031 0.278 -250 32576 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HYCDSEKPR [R].hYcDSEkPR.[C] N-Term(TMT6plex); C3(Carbamidomethyl); K7(TMT6plex) 8 Q3ULB1 Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1 Q99L61; P47226-2; A2ALC6; P47226; Q3ULB1; Q921W7; Q3V085; B1AXB9 Testin OS=Mus musculus OX=10090 GN=Tes PE=2 SV=1; Isoform TES1 of Testin OS=Mus musculus OX=10090 GN=Tes; Testin OS=Mus musculus OX=10090 GN=Tesl2 PE=3 SV=1; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=2; Testin OS=Mus musculus OX=10090 GN=Tesl1 PE=2 SV=1; Testin OS=Mus musculus OX=10090 GN=Tesl1 PE=1 SV=1 0 3 3 0.6085 0 1 1 1 550.62054 1649.84708 1649.847 0.05 0.00003 0/0 0 0 2769804.75 HCD 30 MS2 38.2409 399 110 39.7539 9567 9567 9566 QEplus033719.raw F4 427.6 308.8 363.1 435.4 452.5 406.8 254 2.81 1 FALSE 1.14E-05 0.0007446 0.688 -250 32584 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFDAQTGADR [K].rFDAQTGADR.[E] N-Term(TMT6plex) 8 Q569X4 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1 A0A140LIZ5; Q569X4; Q3TJ97; Q52L53; Q3TUN5; Q3UBF0; Q3TFA5; P54775 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=1 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; Psmc4 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 (Fragment) OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome regulatory subunit 6B OS=Mus musculus OX=10090 GN=Psmc4 PE=1 SV=2 1 2 2 0.4913 0 1 1 1 683.35632 1365.70537 1365.70724 -1.37 -0.00094 0/0 0 0 5176481.5 HCD 30 MS2 30.05445 226 110 39.7564 9568 9568 9566 QEplus033719.raw F4 197 201.4 259.4 224.5 233 240.9 203 2.3 1 FALSE 9.73E-05 0.002938 0.56 -250 32591 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGDRGETGPAGPSGAPGPAGSR [K].sGDRGETGPAGPSGAPGPAGSR.[G] N-Term(TMT6plex) 1 P04258 SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain P04258 SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain 1 3 3 0.7943 0 1 1 1 723.02881 2167.07187 2167.06894 1.35 0.00098 0/0 0 0 16174259 HCD 30 MS2 5.102767 212.5 110 39.759 9569 9569 9566 QEplus033719.raw F4 218.2 77.3 149 545.3 92.7 192.6 231 7.73 1 TRUE 1.14E-05 6.31E-16 4.207 -250 32606 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APQGTQGSKPAQSSR [K].aPQGTQGSkPAQSSR.[S] N-Term(TMT6plex); K9(TMT6plex) 1 Q8C3W1 Uncharacterized protein C1orf198 homolog OS=Mus musculus OX=10090 PE=1 SV=1 Q8C3W1 Uncharacterized protein C1orf198 homolog OS=Mus musculus OX=10090 PE=1 SV=1 0 3 3 0.5083 0 1 1 1 653.36633 1958.08445 1958.08196 1.27 0.00083 0/0 0 0 10974217 HCD 30 MS2 41.10313 412.9 110 39.7637 9571 9571 9566 QEplus033719.raw F4 434.9 321 467.5 339.4 470 444.7 411 3.01 1 FALSE 1.14E-05 1.80E-09 1.759 -250 32616 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVTYQGQR [K].qVTYQGQR.[V] N-Term(TMT6plex) 6 Q3UDG8 Calcium-activated neutral proteinase 1 OS=Mus musculus OX=10090 GN=Capn1 PE=2 SV=1 Q3UDG8; Q3UF24; Q8C2J1; Q80Y25; Q3TI07; Q3TB79 Calcium-activated neutral proteinase 1 OS=Mus musculus OX=10090 GN=Capn1 PE=2 SV=1; Calcium-activated neutral proteinase 1 (Fragment) OS=Mus musculus OX=10090 GN=Capn1 PE=2 SV=1; Calcium-activated neutral proteinase 1 OS=Mus musculus OX=10090 GN=Capn1 PE=2 SV=1; Calcium-activated neutral proteinase 1 OS=Mus musculus OX=10090 GN=Capn1 PE=2 SV=1; Calcium-activated neutral proteinase 1 OS=Mus musculus OX=10090 GN=Capn1 PE=1 SV=1; Calcium-activated neutral proteinase 1 (Fragment) OS=Mus musculus OX=10090 GN=Capn1 PE=2 SV=1 0 2 2 0.5464 0 1 1 1 604.83423 1208.66118 1208.6585 2.22 0.00134 0/0 0 0 10618239 HCD 30 MS2 55.49324 586.3 110 39.7662 9572 9572 9566 QEplus033719.raw F4 636.2 436.3 654.6 597.4 527 666.5 308 2.91 1 FALSE 1.14E-05 4.25E-05 0.928 -250 32624 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTSYAQHQQVR [R].kTSYAQHQQVR.[Q] N-Term(TMT6plex); K1(TMT6plex) 5 P97351 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3 Q3UJU5; P97351; Q3U5P8; Q3UAC2; Q9D1S3 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1 1 3 3 0.671 0 1 1 1 602.01288 1804.02408 1804.02299 0.61 0.00037 0/0 0 0 7009312.5 HCD 30 MS2 10.38694 400.5 110 39.7687 9573 9573 9566 QEplus033719.raw F4 382.8 380.1 423.2 400.9 526.1 290.1 467 3.89 1 FALSE 1.14E-05 1.15E-09 1.796 -250 32632 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEAALCR [R].qEAALcR.[Q] N-Term(TMT6plex); C6(Carbamidomethyl) 2 Q9EPK5 WW domain-containing transcription regulator protein 1 OS=Mus musculus OX=10090 GN=Wwtr1 PE=1 SV=2 Q9EPK5; Q9EPK5-2 WW domain-containing transcription regulator protein 1 OS=Mus musculus OX=10090 GN=Wwtr1 PE=1 SV=2; Isoform 2 of WW domain-containing transcription regulator protein 1 OS=Mus musculus OX=10090 GN=Wwtr1 0 2 2 0.2371 0 1 1 1 538.7901 1076.57292 1076.57199 0.86 0.00046 0/0 0 0 5705178 HCD 30 MS2 54.48347 582.8 110 39.7712 9574 9574 9566 QEplus033719.raw F4 587.7 507.2 580.7 551.3 714.6 555.2 261 1.94 1 FALSE 0.001169 0.01563 0.325 -250 32642 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGPEGNDIR [K].eGPEGNDIR.[KR] N-Term(TMT6plex) 5 A0A1L1SRX2; A2AE27 AMP deaminase OS=Mus musculus OX=10090 GN=Ampd3 PE=1 SV=1;AMP deaminase OS=Mus musculus OX=10090 GN=Ampd2 PE=1 SV=1 A0A1L1SRX2; A2AE27; O08739; Q9DBT5; Q922J7 AMP deaminase OS=Mus musculus OX=10090 GN=Ampd3 PE=1 SV=1; AMP deaminase OS=Mus musculus OX=10090 GN=Ampd2 PE=1 SV=1; AMP deaminase 3 OS=Mus musculus OX=10090 GN=Ampd3 PE=1 SV=2; AMP deaminase 2 OS=Mus musculus OX=10090 GN=Ampd2 PE=1 SV=1; AMP deaminase (Fragment) OS=Mus musculus OX=10090 GN=Ampd3 PE=2 SV=1 0 2 2 0.6307 0 1 1 1 608.31183 1215.61638 1215.6167 -0.26 -0.00016 0/0 0 0 4536399.5 HCD 30 MS2 13.87671 263.5 110 39.7737 9575 9575 9566 QEplus033719.raw F4 251.2 248.1 285 225.9 294.2 276.6 102 3.06 2 FALSE 1.14E-05 4.47E-05 0.924 -250 32647 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASGAPSGSATAPAER [R].aSGAPSGSATAPAER.[G] N-Term(TMT6plex) 2 A0A5H1ZRL3 Negative elongation factor B OS=Mus musculus OX=10090 GN=Nelfb PE=1 SV=1 A0A5H1ZRL3; Q8C4Y3-3 Negative elongation factor B OS=Mus musculus OX=10090 GN=Nelfb PE=1 SV=1; Isoform 2 of Negative elongation factor B OS=Mus musculus OX=10090 GN=Nelfb 0 2 2 0.6847 0 1 1 1 779.90643 1558.80559 1558.80226 2.13 0.00166 0/0 0 0 3560320 HCD 30 MS2 0 117.7 110 39.7763 9576 9576 9566 QEplus033719.raw F4 106.1 128.9 129.6 76.4 151.8 113.4 241 4.98 1 FALSE 1.14E-05 4.14E-12 2.26 -250 32683 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSMDNR [K].vSMDNR.[L] N-Term(TMT6plex) 3 A0A087WQS2 Basic leucine zipper and W2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1 A0A087WQS2; Q9CQC6; A0A087WPF9 Basic leucine zipper and W2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1; Basic leucine zipper and W2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1; Basic leucine zipper and W2 domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1 0 2 2 0.3004 0 1 1 1 475.75037 950.49346 950.49268 0.81 0.00039 0/0 0 0 39940740 HCD 30 MS2 36.0833 780.9 27.953 39.7928 9582 9582 9577 QEplus033719.raw F4 757.9 685.1 797.5 587 1055.5 802.3 107 2.23 1 FALSE 0.002064 0.03809 0.181 -250 32702 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAQTFSR [R].eAQTFSR.[M] N-Term(TMT6plex) 2 Q9Z277 Tyrosine-protein kinase BAZ1B OS=Mus musculus OX=10090 GN=Baz1b PE=1 SV=2 Q9Z277; Q9Z277-2 Tyrosine-protein kinase BAZ1B OS=Mus musculus OX=10090 GN=Baz1b PE=1 SV=2; Isoform 2 of Tyrosine-protein kinase BAZ1B OS=Mus musculus OX=10090 GN=Baz1b 0 2 2 0.5161 0 1 1 1 534.28851 1067.56975 1067.56829 1.37 0.00073 0/0 0 0 14478605 HCD 30 MS2 10.16764 709.1 110 39.7998 9585 9585 9577 QEplus033719.raw F4 666 655.7 716.9 528.1 989.8 698.2 156 2.79 1 FALSE 0.0002218 0.00469 0.509 -250 32708 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAEEANMER [K].aAEEANMER.[K] N-Term(TMT6plex) 3 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q9ERG0; Q8C7S2; A0A2R8VI67 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=1 0 2 2 0.731 0 1 1 1 625.30652 1249.60576 1249.60442 1.08 0.00067 0/0 0 0 11298089 HCD 30 MS2 18.05255 450.3 110 39.8023 9586 9586 9577 QEplus033719.raw F4 423.3 420.1 590.9 365 359.5 543.2 80 3.16 1 FALSE 1.14E-05 4.41E-05 0.925 -250 32712 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPIETER [R].qPIETER.[S] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.5232 0 1 1 1 551.3092 1101.61113 1101.61015 0.89 0.00049 0/0 0 0 10869208 HCD 30 MS2 20.12498 700.9 110 39.8048 9587 9587 9577 QEplus033719.raw F4 800 298.8 564 1141.8 370 1030.9 298 2.37 2 FALSE 0.0002218 0.004655 0.51 -250 32719 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STDFDR [R].sTDFDR.[T] N-Term(TMT6plex) 9 B7ZCF4 Lysosomal acid phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Acp2 PE=1 SV=1 B7ZCF4; Q3UZN1; F6WRF1; D3YTS9; B7ZCF5; D3YZU0; A0A5F8MPS7; Q3U4F3; P24638 Lysosomal acid phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Acp2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acp2 PE=2 SV=1; Testicular acid phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Acp4 PE=4 SV=3; Testicular acid phosphatase OS=Mus musculus OX=10090 GN=Acp4 PE=1 SV=2; Lysosomal acid phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Acp2 PE=1 SV=1; Testicular acid phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Acp4 PE=4 SV=1; Lysosomal acid phosphatase OS=Mus musculus OX=10090 GN=Acp2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acp2 PE=2 SV=1; Lysosomal acid phosphatase OS=Mus musculus OX=10090 GN=Acp2 PE=1 SV=2 0 2 2 0.3057 0 1 1 1 485.24631 969.48534 969.48389 1.49 0.00072 0/0 0 0 14554158 HCD 30 MS2 25.77917 870.5 110 39.8121 9589 9589 9588 QEplus033719.raw F4 878.3 658.2 953.3 836.9 927.2 968.9 34 2.29 1 FALSE 0.003041 0.05921 0.116 -250 32737 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VISSANR [K].vISSANR.[A] N-Term(TMT6plex) 3 P62918 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2 P62918; Q9Z237; Q3THC7 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2; Ribosomal protein L8 (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1 0 2 2 0.1603 0 1 1 1 488.2934 975.57952 975.57846 1.08 0.00053 0/0 0 0 64240720 HCD 30 MS2 58.862 686.4 9.525 39.819 9592 9592 9588 QEplus033719.raw F4 736.4 520.1 716 577.8 843.1 724.9 99 2.37 1 FALSE 0.002696 0.05386 0.131 -250 32763 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTTGTALR [K].dTTGTALR.[I] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.381 0 1 1 1 532.30164 1063.59599 1063.5945 1.4 0.00075 0/0 0 0 27337072 HCD 30 MS2 26.81468 884.6 76.692 39.8258 9595 9595 9588 QEplus033719.raw F4 1098.6 293.8 673.3 1505.4 369.6 1366.8 203 2.31 2 FALSE 1.14E-05 0.0002303 0.788 -250 32771 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GKAEEQAVR [R].gkAEEQAVR.[Q] N-Term(TMT6plex); K2(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.4697 0 1 1 1 482.62091 1445.84818 1445.84765 0.37 0.00018 0/0 0 0 26515718 HCD 30 MS2 33.69106 1128.2 52.052 39.828 9596 9596 9588 QEplus033719.raw F4 1250.6 900 1108.8 1168.8 1345.7 995.1 489 1.98 2 FALSE 0.001257 0.01713 0.308 -250 32779 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GATRPNGPNTGNK [R].gATRPNGPNTGNk.[I] N-Term(TMT6plex); K13(TMT6plex) 1 Q9CQD1 Ras-related protein Rab-5A OS=Mus musculus OX=10090 GN=Rab5a PE=1 SV=1 Q9CQD1 Ras-related protein Rab-5A OS=Mus musculus OX=10090 GN=Rab5a PE=1 SV=1 0 3 3 0.5845 0 1 1 1 581.328 1741.96946 1741.97095 -0.86 -0.0005 0/0 0 0 19610130 HCD 30 MS2 40.14815 637 77.765 39.8303 9597 9597 9588 QEplus033719.raw F4 646.6 521.7 687.7 614.9 651.6 699.4 397 2.07 1 FALSE 1.14E-05 3.18E-05 0.952 -250 32784 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYEYNR [R].dYEYNR.[Y] N-Term(TMT6plex) 2 Q00PI9 Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Mus musculus OX=10090 GN=Hnrnpul2 PE=1 SV=2 Q00PI9; A0A494BAL6 "Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Mus musculus OX=10090 GN=Hnrnpul2 PE=1 SV=2; Predicted gene, 50139 (Fragment) OS=Mus musculus OX=10090 GN=Gm50139 PE=4 SV=1" 0 2 2 0.6239 0 1 1 1 544.76489 1088.52251 1088.521 1.38 0.00075 0/0 0 0 16763559 HCD 30 MS2 26.02999 983.3 110 39.8328 9598 9598 9588 QEplus033719.raw F4 975.4 969.3 1133.8 870.2 1036.3 914.6 27 2.26 1 FALSE 0.005691 0.09567 0.018 -250 32792 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQQMAAPR [R].tQQMAAPR.[N] N-Term(TMT6plex) 3 Q9DC48 Pre-mRNA-processing factor 17 OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1 Q9DC48; Q3UXN9; Q6P8J8 Pre-mRNA-processing factor 17 OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1; Cdc40 protein OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1 0 2 2 0.3854 0 1 1 1 566.31061 1131.61394 1131.61419 -0.22 -0.00013 0/0 0 0 13025384 HCD 30 MS2 42.13163 800.3 110 39.8401 9600 9600 9599 QEplus033719.raw F4 788.9 728.4 837.5 609 1010.2 828 279 2.05 1 FALSE 0.0005076 0.008042 0.438 -250 32799 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLAEGTAQQR [R].qLAEGTAQQR.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5359 0 1 1 1 665.87152 1330.73577 1330.72764 6.1 0.00406 0/0 0 0 21927854 HCD 30 MS2 4.352953 458.4 110 39.8426 9601 9601 9599 QEplus033719.raw F4 496.2 377.5 426.4 264.7 603.6 582.3 342 2.37 2 FALSE 1.14E-05 3.49E-06 1.134 -250 32815 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MLSDRER [R].mLSDRER.[E] N-Term(TMT6plex) 2 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 P14733; Q8C553 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3; IF rod domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Lmnb1 PE=2 SV=1 1 3 3 0.299 0 1 1 1 379.20831 1135.61039 1135.60911 1.13 0.00043 0/0 0 0 72168744 HCD 30 MS2 28.90419 510.9 18.589 39.8471 9603 9603 9599 QEplus033719.raw F4 528.7 501.5 568 336.4 663.8 467.1 187 3.01 1 FALSE 0.001658 0.0274 0.23 -250 32823 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CGHTNNLRPK [K].cGHTNNLRPk.[K] N-Term(TMT6plex); C1(Carbamidomethyl); K10(TMT6plex) 2 P62984 Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2 P62984; E9QNP0 Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2; 60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1 0 4 4 0.6229 0 1 1 1 414.48642 1654.92385 1654.92116 1.62 0.00067 0/0 0 0 31051388 HCD 30 MS2 31.32033 834.2 61.48 39.8494 9604 9604 9599 QEplus033719.raw F4 902.8 623.5 840.5 699.3 1018.7 920.6 426 3.58 1 FALSE 1.14E-05 1.94E-05 0.993 -250 32844 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATSSTQSLAR [R].aTSSTQSLAR.[L] N-Term(TMT6plex) 4 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 Q91W16; E9Q7G0; Q3UNM2; F6ZQA3 Numa1 protein OS=Mus musculus OX=10090 GN=Numa1 PE=2 SV=1; Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=2 SV=1; Nuclear mitotic apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 0 2 2 0.61 0 1 1 1 625.8493 1250.69133 1250.69019 0.91 0.00057 0/0 0 0 14173681 HCD 30 MS2 37.74921 590 110 39.8564 9607 9607 9599 QEplus033719.raw F4 573.3 656.6 670.8 398.8 700.1 540.3 366 3.59 1 FALSE 1.14E-05 8.09E-09 1.635 -250 32859 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WREEQTER [K].wREEQTER.[L] N-Term(TMT6plex) 7 Q6PFA2 Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1 Q6PFA2; O08585; B1AWD9; B1AWD8; B1AWE0; Q3THU7; B1AWE1 Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain A OS=Mus musculus OX=10090 GN=Clta PE=1 SV=2; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=2 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1 1 2 2 0.5762 0 1 1 1 681.85303 1362.69878 1362.69634 1.79 0.00122 0/0 0 0 5352250.5 HCD 30 MS2 23.76173 175.8 110 39.8614 9609 9609 9599 QEplus033719.raw F4 171.7 153.5 193.7 159.8 183.3 192.7 201 3.02 1 FALSE 1.14E-05 0.0002639 0.776 -250 32871 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WREEQTER [K].wREEQTER.[L] N-Term(TMT6plex) 7 Q6PFA2 Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1 Q6PFA2; O08585; B1AWD9; B1AWD8; B1AWE0; Q3THU7; B1AWE1 Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain A OS=Mus musculus OX=10090 GN=Clta PE=1 SV=2; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=2 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1 1 3 3 0.5659 0 1 1 1 454.90424 1362.69815 1362.69634 1.33 0.0006 0/0 0 0 82026872 HCD 30 MS2 4.331319 399.3 16.012 39.8735 9613 9613 9610 QEplus033719.raw F4 386.3 380.2 464.9 328.3 431.3 404.8 205 3.34 1 FALSE 5.44E-05 0.002664 0.57 -250 32876 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMSVER [KR].sMSVER.[TD] N-Term(TMT6plex) 14 Q5Q9H2; Q8BVQ9 DNA polymerase kappa OS=Mus musculus OX=10090 GN=Polk PE=2 SV=1;26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=1 SV=1 Q5Q9H2; Q5Q9H5; Q3UIH5; Q3U5V3; Q5Q9H8; Q5Q9H1; Q8BVQ9; P46471; Q9QUG2-2; Q9QUG2; Q5Q9H0; A0A1Y7VIV8; Q5Q9H7; Q5Q9H6 DNA polymerase kappa OS=Mus musculus OX=10090 GN=Polk PE=2 SV=1; DNA polymerase kappa OS=Mus musculus OX=10090 GN=Polk PE=1 SV=1; 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=2 SV=1; DNA polymerase kappa OS=Mus musculus OX=10090 GN=Polk PE=2 SV=1; DNA polymerase kappa OS=Mus musculus OX=10090 GN=Polk PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=1 SV=1; 26S proteasome regulatory subunit 7 OS=Mus musculus OX=10090 GN=Psmc2 PE=1 SV=5; Isoform 2 of DNA polymerase kappa OS=Mus musculus OX=10090 GN=Polk; DNA polymerase kappa OS=Mus musculus OX=10090 GN=Polk PE=1 SV=1; DNA polymerase kappa OS=Mus musculus OX=10090 GN=Polk PE=1 SV=1; DNA polymerase kappa OS=Mus musculus OX=10090 GN=Polk PE=1 SV=1; DNA polymerase kappa OS=Mus musculus OX=10090 GN=Polk PE=1 SV=1; DNA polymerase kappa OS=Mus musculus OX=10090 GN=Polk PE=1 SV=1 0 2 2 0.2947 0 1 1 2 469.25314 937.49901 937.49743 1.68 0.00079 0/0 0 0 72557872 HCD 30 MS2 13.91562 714.8 18.138 39.8758 9614 9614 9610 QEplus033719.raw F4 701.7 582.1 760.8 670.1 786.4 788 111 1.9 2 FALSE 0.005214 0.08903 0.037 -250 32886 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RKEDSPNLR [K].rkEDSPNLR.[E] N-Term(TMT6plex); K2(TMT6plex) 2 O09131 Glutathione S-transferase omega-1 OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=2 O09131; A0A494BAB1 Glutathione S-transferase omega-1 OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=2; Glutathione-dependent dehydroascorbate reductase OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=1 2 4 4 0.4272 0 1 1 1 393.9866 1572.92458 1572.92221 1.51 0.00059 0/0 0 0 47936268 HCD 30 MS2 46.78844 395.6 19.798 39.878 9615 9615 9610 QEplus033719.raw F4 437.3 327.2 411.7 406.7 399 391.5 393 3.16 1 FALSE 0.0002119 0.004358 0.517 -250 32892 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAHFVR [R].eAHFVR.[T] N-Term(TMT6plex) 3 Q9CQM8 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=1 Q4VA28; Q9CQM8; O09167 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=2 SV=1; 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=1; 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=3 0 2 2 0.5213 0 1 1 1 494.27963 987.55199 987.55733 -5.41 -0.00267 0/0 0 0 34898536 HCD 30 MS2 30.36206 658.5 21.292 39.8826 9617 9617 9610 QEplus033719.raw F4 659.2 552.4 679.3 592.7 764.1 703.5 165 2.11 1 FALSE 0.007623 0.125 -0.051 -250 32896 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENYIHR [R].eNYIHR.[IWS] N-Term(TMT6plex) 12 Q3UXC2; P10630 RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1;Eukaryotic initiation factor 4A-II OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=2 E9Q561; Q3U8I0; Q3UXC2; P60843; Q3TGK7; Q3TLL6; P10630-2; Q99LR0; Q8BTU6; Q4FZL1; Q3TFG3; P10630 Eukaryotic initiation factor 4A-II OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; Eukaryotic initiation factor 4A-I OS=Mus musculus OX=10090 GN=Eif4a1 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; Isoform 2 of Eukaryotic initiation factor 4A-II OS=Mus musculus OX=10090 GN=Eif4a2; Eif4a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; Eukaryotic initiation factor 4A-II OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=2 0 3 3 0.4015 0 1 1 1 354.19662 1060.57532 1060.57371 1.52 0.00054 0/0 0 0 23273078 HCD 30 MS2 27.20898 357.4 43.63 39.8848 9618 9618 9610 QEplus033719.raw F4 383.7 279.7 401.6 258 432.3 389.2 311 2.59 2 FALSE 0.002148 0.04063 0.172 -250 32901 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEVTEAAR [K].aEVTEAAR.[Q] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.3632 0 1 1 1 538.30438 1075.60149 1075.5945 6.49 0.00349 0/0 0 0 10985960 HCD 30 MS2 41.87772 840.6 110 39.8873 9619 9619 9610 QEplus033719.raw F4 883 696.2 796.5 807 1012.5 848.4 266 2.23 2 FALSE 1.14E-05 0.0005578 0.713 -250 32907 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNSDPAKPGNER [R].dNSDPAkPGNER.[Q] N-Term(TMT6plex); K7(TMT6plex) 4 Q3UMU9 Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2 PE=1 SV=1 Q3UMU9-4; Q3UMU9-3; Q3UMU9-2; Q3UMU9 Isoform 4 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Isoform 3 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Isoform 2 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2 PE=1 SV=1 0 3 3 0.5671 0 1 1 1 586.64526 1757.92124 1757.91825 1.7 0.001 0/0 0 0 9862347 HCD 30 MS2 17.6553 652.5 110 39.8898 9620 9620 9610 QEplus033719.raw F4 692.7 576.1 686.6 520.6 757.2 681.6 292 2.98 1 FALSE 1.14E-05 1.66E-06 1.195 -250 32932 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CGHTNNLRPK [K].cGHTNNLRPk.[K] N-Term(TMT6plex); C1(Carbamidomethyl); K10(TMT6plex) 2 P62984 Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2 P62984; E9QNP0 Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2; 60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1 0 3 3 0.6667 0 1 1 1 552.3125 1654.92295 1654.92116 1.08 0.00059 0/0 0 0 36375916 HCD 30 MS2 23.92553 882.3 50.745 39.9016 9624 9624 9621 QEplus033719.raw F4 983.3 614.5 869.2 917.5 881.8 1027.4 429 3.21 1 FALSE 1.14E-05 6.36E-10 1.844 -250 32941 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RKEDSPNLR [K].rkEDSPNLR.[E] N-Term(TMT6plex); K2(TMT6plex) 2 O09131 Glutathione S-transferase omega-1 OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=2 O09131; A0A494BAB1 Glutathione S-transferase omega-1 OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=2; Glutathione-dependent dehydroascorbate reductase OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=1 2 3 3 0.3667 0 1 1 1 524.97968 1572.92447 1572.92221 1.44 0.00075 0/0 0 0 23476492 HCD 30 MS2 28.11235 863 79.838 39.9039 9625 9625 9621 QEplus033719.raw F4 808.4 803.8 910.4 842.6 890.7 921.9 393 2.1 1 FALSE 0.006061 0.09955 0.008 -250 32947 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISASPQR [R].iSASPQR.[L] N-Term(TMT6plex) 5 Q8CAJ7 Aspartyl aminopeptidase OS=Mus musculus OX=10090 GN=Dnpep PE=2 SV=1 Q8BPW9; Q8CAJ7; Q3TVK3; Q3U3I6; Q9Z2W0 Aspartyl aminopeptidase OS=Mus musculus OX=10090 GN=Dnpep PE=1 SV=1; Aspartyl aminopeptidase OS=Mus musculus OX=10090 GN=Dnpep PE=2 SV=1; Aspartyl aminopeptidase OS=Mus musculus OX=10090 GN=Dnpep PE=1 SV=1; Aspartyl aminopeptidase OS=Mus musculus OX=10090 PE=2 SV=1; Aspartyl aminopeptidase OS=Mus musculus OX=10090 GN=Dnpep PE=1 SV=2 0 2 2 0.2539 0 1 1 1 494.29364 987.58 987.57846 1.56 0.00077 0/0 0 0 21844566 HCD 30 MS2 54.36417 756.8 29.206 39.9061 9626 9626 9621 QEplus033719.raw F4 781.7 639.2 822.6 642 871.6 783.8 313 1.93 1 FALSE 0.003372 0.06519 0.1 -250 32964 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVGVQGDCR [K].tVGVQGDcR.[S] N-Term(TMT6plex); C8(Carbamidomethyl) 1 B2RRH9 Glutamine amidotransferase OS=Mus musculus OX=10090 GN=Gmps PE=1 SV=1 B2RRH9 Glutamine amidotransferase OS=Mus musculus OX=10090 GN=Gmps PE=1 SV=1 0 2 2 0.6748 0 1 1 1 610.81818 1220.62908 1220.62549 2.94 0.00179 0/0 0 0 13110560 HCD 30 MS2 20.1095 811.2 110 39.9109 9628 9628 9621 QEplus033719.raw F4 862.8 704.4 858.9 598 1034.2 808.8 171 2.86 1 FALSE 1.14E-05 0.0001619 0.817 -250 32970 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAEENLDR [K].tAEENLDR.[R] N-Term(TMT6plex) 2 Q64521 "Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=2" Q64521; A2AQR0 "Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=2; Glycerol-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=1" 0 2 2 0.4985 0 1 1 1 588.80725 1176.60723 1176.6058 1.21 0.00071 0/0 0 0 13176982 HCD 30 MS2 11.46896 808.2 110 39.9134 9629 9629 9621 QEplus033719.raw F4 744.5 895.6 942 662.6 802.1 802.6 180 3.37 1 FALSE 1.14E-05 0.0007741 0.685 -250 32975 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDFSSGTSSR [R].dDFSSGTSSR.[S] N-Term(TMT6plex) 2 Q64521 "Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=2" Q64521; A2AQR0 "Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=2; Glycerol-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=1" 0 2 2 0.7552 0 1 1 1 644.30463 1287.60198 1287.60144 0.42 0.00027 0/0 0 0 8462848 HCD 30 MS2 17.56361 394.1 110 39.9159 9630 9630 9621 QEplus033719.raw F4 359.6 419.5 474.3 335.7 358.1 417.2 42 3.39 1 FALSE 1.14E-05 1.67E-07 1.385 -250 32988 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADMETLQR [K].aDmETLQR.[I] N-Term(TMT6plex); M3(Oxidation) 3 Q9D0R2 "Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2" Q3U630; Q9D0R2; Q99KJ4 "Threonyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1; Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2; Threonyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1" 0 2 2 0.4265 0 1 1 1 604.81189 1208.6165 1208.61425 1.86 0.00112 0/0 0 0 4467996.5 HCD 30 MS2 12.20745 302.3 110 39.9257 9633 9633 9632 QEplus033719.raw F4 301.8 234 322.3 301.1 287.6 367 162 2.11 1 FALSE 0.004222 0.07737 0.068 -250 32992 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHEEEIR [K].vHEEEIR.[E] N-Term(TMT6plex) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 2 2 0.2256 0 1 1 1 570.81488 1140.62248 1140.62105 1.25 0.00072 0/0 0 0 13907224 HCD 30 MS2 29.42419 731 110 39.9282 9634 9634 9632 QEplus033719.raw F4 848.3 372.2 719.1 947.5 497.1 1001.7 193 2.97 1 FALSE 0.001343 0.01874 0.292 -250 33000 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLAEGTAQQR [R].qLAEGTAQQR.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.614 0 1 1 1 665.86908 1330.73088 1330.72764 2.43 0.00162 0/0 0 0 91780960 HCD 30 MS2 2.599478 424.6 25.062 39.9305 9635 9635 9632 QEplus033719.raw F4 441 360.7 435.1 349 486.3 475.5 321 3.29 2 FALSE 1.14E-05 1.24E-07 1.41 -250 33006 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHEEEIR [K].vHEEEIR.[E] N-Term(TMT6plex) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 3 3 0.1532 0 1 1 1 380.87894 1140.62226 1140.62105 1.06 0.0004 0/0 0 0 91607144 HCD 30 MS2 11.39472 214.3 13.21 39.9328 9636 9636 9632 QEplus033719.raw F4 258.4 100.4 198.3 277.9 154.2 296.7 193 3.72 1 FALSE 1.14E-05 0.0004204 0.737 -250 33014 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEVTEAAR [K].aEVTEAAR.[Q] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.4502 0 1 1 1 538.3017 1075.59612 1075.5945 1.5 0.00081 0/0 0 0 53353748 HCD 30 MS2 14.15064 673.1 26.493 39.935 9637 9637 9632 QEplus033719.raw F4 729.9 548.5 656.6 581.3 818.5 703.6 279 2.91 2 FALSE 1.14E-05 0.0001211 0.841 -250 33021 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQPWHR [R].dQPWHR.[E] N-Term(TMT6plex) 2 Q9R059 Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=2 F2Z455; Q9R059 Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=1; Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=2 0 3 3 0.4921 0 1 1 1 356.52475 1067.5597 1067.55839 1.22 0.00043 0/0 0 0 37787344 HCD 30 MS2 18.9962 312.9 29.044 39.9373 9638 9638 9632 QEplus033719.raw F4 344.4 277.9 308.1 282.3 347.4 317.4 155 2.52 1 FALSE 0.001903 0.03263 0.204 -250 33027 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYSGYQR [R].dYSGYQR.[D] N-Term(TMT6plex) 7 Q60865 Caprin-1 OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=2 A2BH47; Q3TEY4; Q3TTW8; A1L0T9; Q8CD82; F6YP03; Q60865 Caprin-1 (Fragment) OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=1; Caprin-1_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Caprin1 PE=2 SV=1; Caprin-1_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Caprin1 PE=2 SV=1; Caprin1 protein (Fragment) OS=Mus musculus OX=10090 GN=Caprin1 PE=2 SV=1; Caprin-1_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Caprin1 PE=2 SV=1; Caprin-1 (Fragment) OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=1; Caprin-1 OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=2 0 2 2 0.642 0 1 1 1 559.27808 1117.54888 1117.54755 1.18 0.00066 0/0 0 0 34731136 HCD 30 MS2 30.68532 479.1 33.898 39.9395 9639 9639 9632 QEplus033719.raw F4 437.9 450.6 544.7 333.2 661.8 446.1 43 2.43 1 FALSE 0.001108 0.01451 0.339 -250 33051 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPTEAPADCR [K].tPTEAPADcR.[A] N-Term(TMT6plex); C9(Carbamidomethyl) 10 Q4JG03 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1 Q3TMX4; Q3TL29; Q7TMY8-4; Q4JG03; Q3TNP1; Q7TMY8-3; Q7TMY8; Q7TMY8-2; A2AFQ0; Q8BKX3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; DUF908 domain-containing protein OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; Isoform 4 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; Isoform 3 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=5; Isoform 2 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=1; UBA domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1 0 2 2 0.68 0 1 1 1 673.83362 1346.65996 1346.65718 2.06 0.00139 0/0 0 0 6881983.5 HCD 30 MS2 9.419322 220.2 110 39.9536 9644 9644 9643 QEplus033719.raw F4 227.4 196.7 236.8 194.9 231.8 233.4 96 3 1 FALSE 1.14E-05 8.53E-07 1.25 -250 33058 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQPWHR [R].dQPWHR.[E] N-Term(TMT6plex) 2 Q9R059 Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=2 F2Z455; Q9R059 Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=1; Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=2 0 2 2 0.4252 0 1 1 1 534.28424 1067.5612 1067.55839 2.63 0.00141 0/0 0 0 9974490 HCD 30 MS2 28.71815 614.2 110 39.9561 9645 9645 9643 QEplus033719.raw F4 696.2 516.8 643.9 540.6 657.9 629.9 135 2.14 1 FALSE 0.003058 0.0597 0.115 -250 33075 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HCDLQVR [R].hcDLQVR.[I] N-Term(TMT6plex); C2(Carbamidomethyl) 6 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3UEK3; Q6A0B9; Q3TKF9; Q3UL99; Q3UM46 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; MKIAA0139 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 0 3 3 0.189 0 1 1 1 386.20844 1156.61075 1156.60944 1.13 0.00044 0/0 0 0 50500068 HCD 30 MS2 27.70781 261.8 22.848 39.9606 9647 9647 9643 QEplus033719.raw F4 347.4 191.5 270.5 220.4 272.5 268.5 128 3.44 1 FALSE 5.44E-05 0.002032 0.597 -250 33085 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENYIHR [R].eNYIHR.[IWS] N-Term(TMT6plex) 12 Q3UXC2; P10630 RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1;Eukaryotic initiation factor 4A-II OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=2 E9Q561; Q3U8I0; Q3UXC2; P60843; Q3TGK7; Q3TLL6; P10630-2; Q99LR0; Q8BTU6; Q4FZL1; Q3TFG3; P10630 Eukaryotic initiation factor 4A-II OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; Eukaryotic initiation factor 4A-I OS=Mus musculus OX=10090 GN=Eif4a1 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; Isoform 2 of Eukaryotic initiation factor 4A-II OS=Mus musculus OX=10090 GN=Eif4a2; Eif4a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; Eukaryotic initiation factor 4A-II OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=2 0 2 2 0.3279 0 1 1 1 530.79126 1060.57524 1060.57371 1.45 0.00077 0/0 0 0 39652252 HCD 30 MS2 7.937666 868.3 65.538 39.9629 9648 9648 9643 QEplus033719.raw F4 916.9 715.1 969.2 658.5 938.3 1011.6 311 2.47 2 FALSE 0.002552 0.05012 0.142 -250 33097 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GFGSEEGSR [R].gFGSEEGSR.[A] N-Term(TMT6plex) 2 A0A0G2JFX7 RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a PE=1 SV=1 A0A0G2JFX7; Q9CWZ3 RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a PE=1 SV=1; RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a PE=1 SV=4 0 2 2 0.5563 0 1 1 1 577.7854 1154.56352 1154.56393 -0.35 -0.0002 0/0 0 0 21191656 HCD 30 MS2 15.94269 742.6 92.603 39.9674 9650 9650 9643 QEplus033719.raw F4 750.8 706.5 813.5 562.6 866.4 755.8 69 3.02 1 FALSE 0.0004292 0.00748 0.449 -250 33115 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVPAAQR [R].kVPAAQR.[G] N-Term(TMT6plex); K1(TMT6plex) 5 Q3TEA8 Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1 Q3TEA8; Q3TEA8-3; Z4YKB8; Q3TEA8-2; Z4YKA3 Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1; Isoform 3 of Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3; Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1; Isoform 2 of Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3; Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1 1 3 3 0.3538 0 1 1 1 409.93692 1227.79621 1227.79376 1.99 0.00082 0/0 0 0 13738591 HCD 30 MS2 46.89933 831.7 74.897 39.9721 9652 9652 9643 QEplus033719.raw F4 905.7 755.4 1001 799 765.8 763.4 92 2.6 1 FALSE 0.001318 0.01818 0.298 -250 33132 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRGTPATAGSSGETK [K].dRGTPATAGSSGETk.[K] N-Term(TMT6plex); K15(TMT6plex) 4 Q3UI84 Replication factor C subunit 4 OS=Mus musculus OX=10090 GN=Rfc4 PE=1 SV=1 Q3UI84; Q99J62; D3Z7I8; D6RGM1 Replication factor C subunit 4 OS=Mus musculus OX=10090 GN=Rfc4 PE=1 SV=1; Replication factor C subunit 4 OS=Mus musculus OX=10090 GN=Rfc4 PE=1 SV=1; Replication factor C subunit 4 OS=Mus musculus OX=10090 GN=Rfc4 PE=1 SV=1; Replication factor C subunit 4 (Fragment) OS=Mus musculus OX=10090 GN=Rfc4 PE=1 SV=2 1 3 3 0.7469 0 1 1 1 631.67499 1893.01041 1893.00779 1.38 0.00087 0/0 0 0 6898355.5 HCD 30 MS2 0 301.7 110 39.982 9655 9655 9654 QEplus033719.raw F4 306.2 293 292.1 172.6 448.8 297.2 423 6.48 1 FALSE 1.14E-05 6.31E-16 3.175 -250 33139 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNMQAQQSAVR [R].gNMQAQQSAVR.[L] N-Term(TMT6plex) 1 Q91YU8 Suppressor of SWI4 1 homolog OS=Mus musculus OX=10090 GN=Ppan PE=1 SV=2 Q91YU8 Suppressor of SWI4 1 homolog OS=Mus musculus OX=10090 GN=Ppan PE=1 SV=2 0 2 2 0.6866 0 1 1 1 709.87384 1418.7404 1418.73716 2.29 0.00162 0/0 0 0 6062614.5 HCD 30 MS2 0 189.7 110 39.9845 9656 9656 9654 QEplus033719.raw F4 190.9 184.4 225.6 124.4 230.9 182.3 238 4.18 1 FALSE 1.14E-05 6.03E-10 1.849 -250 33143 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRTPSDVK [R].nRTPSDVk.[E] N-Term(TMT6plex); K8(TMT6plex) 1 O35381 Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 O35381 Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 1 3 3 0.485 0 1 1 1 458.94226 1374.81223 1374.81053 1.23 0.00056 0/0 0 0 43301092 HCD 30 MS2 8.612387 559.3 26.66 39.9867 9657 9657 9654 QEplus033719.raw F4 717.6 448.8 621.4 481 665.2 421.7 534 3.01 1 FALSE 0.001108 0.01431 0.341 -250 33166 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVEHNIR [R].vVEHNIR.[I] N-Term(TMT6plex) 4 Q9D8W5 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=4 Q3U8F5; Q9D8W5; B1AT36; Q3TRH2 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd12 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=4; 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=1 0 2 2 0.4549 0 1 1 1 548.328 1095.64873 1095.64721 1.39 0.00076 0/0 0 0 13839769 HCD 30 MS2 15.516 622.5 110 39.996 9661 9661 9654 QEplus033719.raw F4 634 502.3 611.5 561.5 737.9 687.6 106 2.33 1 FALSE 0.002132 0.03992 0.175 -250 33171 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDASPSSIR [K].sDASPSSIR.[I] N-Term(TMT6plex) 2 P49718 DNA replication licensing factor MCM5 OS=Mus musculus OX=10090 GN=Mcm5 PE=1 SV=2 P49718; Q8BQ03 DNA replication licensing factor MCM5 OS=Mus musculus OX=10090 GN=Mcm5 PE=1 SV=2; DNA helicase OS=Mus musculus OX=10090 GN=Mcm5 PE=2 SV=1 0 2 2 0.3938 0 1 1 1 574.80969 1148.61211 1148.61088 1.07 0.00061 0/0 0 0 10303350 HCD 30 MS2 0 580.9 110 39.9985 9662 9662 9654 QEplus033719.raw F4 583.3 661.9 539.5 321.1 915.5 464 230 2.92 1 FALSE 1.14E-05 0.0001962 0.801 -250 33196 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASSPATSSQGK [K].aSSPATSSQGk.[K] N-Term(TMT6plex); K11(TMT6plex) 11 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5-6; Q3ULC0; Q99PL5-4; Q99PL5-9; Q99PL5-7; Q99PL5; Q99PL5-8; Q99PL5-5; Q99PL5-3; Q99PL5-2 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Isoform RRp15a of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1; Isoform RRp41 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp5.4 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp15b of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; Isoform RRp10 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp16.8 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp47 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp61 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 0 2 2 0.6196 0 1 1 1 739.91681 1478.82634 1478.82149 3.28 0.00242 0/0 0 0 2677125.5 HCD 30 MS2 38.46068 206.1 110 40.0133 9667 9667 9665 QEplus033719.raw F4 233.1 171.3 255.2 189.1 177.6 210.4 461 4.18 1 FALSE 1.14E-05 1.40E-08 1.589 -250 33205 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNDLVR [K].nNDLVR.[K] N-Term(TMT6plex) 5 Q9JHJ0 Tropomodulin-3 OS=Mus musculus OX=10090 GN=Tmod3 PE=1 SV=1 Q9JKK7-3; Q9JKK7; Q9JHJ0; Q3TFA9; Q8C3Z3 Isoform 3 of Tropomodulin-2 OS=Mus musculus OX=10090 GN=Tmod2; Tropomodulin-2 OS=Mus musculus OX=10090 GN=Tmod2 PE=1 SV=2; Tropomodulin-3 OS=Mus musculus OX=10090 GN=Tmod3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmod3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tmod3 PE=2 SV=1 0 2 2 0.1351 0 1 1 1 480.27808 959.54888 959.54716 1.79 0.00086 0/0 0 0 20642296 HCD 30 MS2 29.3871 796.8 64.683 40.0178 9669 9669 9665 QEplus033719.raw F4 749.1 827.4 776.3 621.1 981.7 825 217 2.22 1 FALSE 0.002483 0.04897 0.145 -250 33212 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISASSATR [R].iSASSATR.[E] N-Term(TMT6plex) 7 A0A1D5RMM8 Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=2 A0A0J9YV30; Q3UG90; Q8VI36-2; F8VQ28; Q8VI36; A0A1D5RMM8; Q99LE7 Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=1; Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=2 SV=1; Isoform Alpha of Paxillin OS=Mus musculus OX=10090 GN=Pxn; Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=1; Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=1; Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=2; Paxillin (Fragment) OS=Mus musculus OX=10090 GN=Pxn PE=2 SV=1 0 2 2 0.3717 0 1 1 1 511.298 1021.58873 1021.58394 4.69 0.0024 0/0 0 0 11489407 HCD 30 MS2 58.46363 1010 105.061 40.0203 9670 9670 9665 QEplus033719.raw F4 1077 763.2 1126.5 1007.5 921 1165.1 143 2.69 1 FALSE 5.44E-05 0.001848 0.606 -250 33222 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGTEEEEEEEEQSRR [R].aGTEEEEEEEEQSRR.[D] N-Term(TMT6plex) 3 Q9JK23 Proteasome assembly chaperone 1 OS=Mus musculus OX=10090 GN=Psmg1 PE=1 SV=1 Q9JK23; A0A3B2WB82; A0A3B2W3V4 Proteasome assembly chaperone 1 OS=Mus musculus OX=10090 GN=Psmg1 PE=1 SV=1; Proteasome assembly chaperone 1 OS=Mus musculus OX=10090 GN=Psmg1 PE=1 SV=1; Proteasome assembly chaperone 1 OS=Mus musculus OX=10090 GN=Psmg1 PE=1 SV=1 1 3 3 0.7792 0 1 1 1 679.64636 2036.92453 2036.9206 1.93 0.00131 0/0 0 0 5838754.5 HCD 30 MS2 14.66801 165 110 40.0228 9671 9671 9665 QEplus033719.raw F4 172.4 164.9 178 122.7 203.1 148.8 50 5.57 1 FALSE 1.14E-05 6.31E-16 3.619 -250 33226 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVYQEAR [K].sVYQEAR.[T] N-Term(TMT6plex) 3 A0A1W2P6H1 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2 A0A1W2P6H1; E9QQ96; A2AAJ9-3 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Isoform 3 of Obscurin OS=Mus musculus OX=10090 GN=Obscn 0 2 2 0.4231 0 1 1 1 541.29468 1081.58208 1081.58394 -1.72 -0.00093 0/0 0 0 3264533.75 HCD 30 MS2 34.7322 384.8 110 40.0253 9672 9672 9665 QEplus033719.raw F4 382.9 246.1 400.4 428.5 333 517.9 140 2.6 1 FALSE 0.0005556 0.008512 0.43 -250 33240 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MPDDDGGDR [K].mPDDDGGDR.[I] N-Term(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; Q8BUX4; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.7653 0 1 1 1 603.76788 1206.52849 1206.52583 2.2 0.00133 0/0 0 0 2907142.75 HCD 30 MS2 56.93347 413.5 110 40.0303 9674 9674 9665 QEplus033719.raw F4 420.9 255.6 385.7 560.5 296.2 562.3 6 2.94 2 FALSE 0.0003496 0.006809 0.462 -250 33246 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIDGPHSGR [K].vIDGPHSGR.[E] N-Term(TMT6plex) 2 O55201 Transcription elongation factor SPT5 OS=Mus musculus OX=10090 GN=Supt5h PE=1 SV=1 O55201-2; O55201 Isoform 2 of Transcription elongation factor SPT5 OS=Mus musculus OX=10090 GN=Supt5h; Transcription elongation factor SPT5 OS=Mus musculus OX=10090 GN=Supt5h PE=1 SV=1 0 2 2 0.396 0 1 1 1 583.82764 1166.648 1166.64794 0.05 0.00003 0/0 0 0 816567.0625 HCD 30 MS2 55.47206 270.7 110 40.0402 9677 9677 9676 QEplus033719.raw F4 347.7 202.1 242.1 223.2 355.4 253.9 260 2.02 1 FALSE 0.0005556 0.008372 0.432 -250 33254 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WASEPEHDHR [R].wASEPEHDHR.[K] N-Term(TMT6plex) 2 Q9D0M3 "Cytochrome c1, heme protein, mitochondrial OS=Mus musculus OX=10090 GN=Cyc1 PE=1 SV=1" Q9D0M3; Q9D0M3-2 "Cytochrome c1, heme protein, mitochondrial OS=Mus musculus OX=10090 GN=Cyc1 PE=1 SV=1; Isoform 2 of Cytochrome c1, heme protein, mitochondrial OS=Mus musculus OX=10090 GN=Cyc1" 0 2 2 0.7163 0 1 1 1 746.86157 1492.71587 1492.71306 1.88 0.00141 0/0 0 0 1888944.375 HCD 30 MS2 0 62.4 110 40.0427 9678 9678 9676 QEplus033719.raw F4 63.2 46.8 68.7 80.6 47.6 67.5 88 3.49 1 FALSE 1.14E-05 1.01E-07 1.426 -250 33269 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAENFR [K].tAENFR.[AQ] N-Term(TMT6plex) 13 Q3UAJ1; Q9CR16; Q3UWH9 Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1;Peptidyl-prolyl cis-trans isomerase D OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=3;Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1 Q3UAJ1; Q9CR16; Q3UWH9; Q3UB60; Q5SVY2; Q99KR7; A2BGI9; Q9CZK9; Q9D868; A0A1L1SST0; Q4G0C5; A2BGI8; Q3UY37 "Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase D OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=3; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppid PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase F, mitochondrial OS=Mus musculus OX=10090 GN=Ppif PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase (Fragment) OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1" 0 2 2 0.542 0 1 1 1 483.76462 966.52196 966.52061 1.4 0.00067 0/0 0 0 99873040 HCD 30 MS2 5.588419 882.3 15.871 40.0472 9680 9680 9676 QEplus033719.raw F4 914.7 811 927.6 673.5 1118.8 848 87 2.38 3 FALSE 0.006298 0.1023 0 -250 33277 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHVPEEHPK [K].qHVPEEHPk.[D] N-Term(TMT6plex); K9(TMT6plex) 2 Q8CGY6 Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b PE=1 SV=1 Q8CGY6; Q8CGY6-2 Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b PE=1 SV=1; Isoform 2 of Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b 0 4 4 0.7249 0 1 1 1 390.47437 1558.87563 1558.8742 0.92 0.00036 0/0 0 0 43482348 HCD 30 MS2 11.11471 464.5 33.009 40.0517 9682 9682 9676 QEplus033719.raw F4 523.4 209.8 468.3 565.2 360.5 659.5 406 3.89 1 FALSE 1.14E-05 0.0003104 0.763 -250 33301 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAPKEDDASASTSQSSR [R].sAPkEDDASASTSQSSR.[A] N-Term(TMT6plex); K4(TMT6plex) 8 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 3 3 0.7203 0 1 1 1 728.03888 2182.10208 2182.09879 1.51 0.0011 0/0 0 0 9534905 HCD 30 MS2 0 368.8 110 40.061 9686 9686 9676 QEplus033719.raw F4 362.6 445.1 444.2 303.7 338.1 319.3 271 4.54 1 FALSE 1.14E-05 1.13E-14 2.746 -250 33311 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGAALDQDNR [K].eGAALDQDNR.[A] N-Term(TMT6plex) 3 A2ARP8 Microtubule-associated protein 1A OS=Mus musculus OX=10090 GN=Map1a PE=1 SV=1 A2ARP8; Q9QYR6; Q9QYR6-2 Microtubule-associated protein 1A OS=Mus musculus OX=10090 GN=Map1a PE=1 SV=1; Microtubule-associated protein 1A OS=Mus musculus OX=10090 GN=Map1a PE=1 SV=2; Isoform 2 of Microtubule-associated protein 1A OS=Mus musculus OX=10090 GN=Map1a 0 2 2 0.5538 0 1 1 1 659.33502 1317.66277 1317.65962 2.39 0.00157 0/0 0 0 10640778 HCD 30 MS2 4.445579 363.5 110 40.0708 9689 9689 9687 QEplus033719.raw F4 393.9 275.4 399.3 348.4 361.6 402.6 141 3.72 1 FALSE 1.14E-05 2.65E-08 1.537 -250 33315 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRESITR [R].vRESITR.[T] N-Term(TMT6plex) 1 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 1 3 3 0.3733 0 1 1 1 363.8912 1089.65906 1089.65777 1.18 0.00043 0/0 0 0 38132784 HCD 30 MS2 6.261633 355.9 30.939 40.0731 9690 9690 9687 QEplus033719.raw F4 370.9 365.8 385.6 255.9 482.4 274.6 235 2.92 1 FALSE 0.00079 0.01101 0.388 -250 33335 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVLSCPR [K].rVLScPR.[C] N-Term(TMT6plex); C5(Carbamidomethyl) 2 Q922Q1 Mitochondrial amidoxime reducing component 2 OS=Mus musculus OX=10090 GN=Mtarc2 PE=1 SV=1 E0CZH6; Q922Q1 Mitochondrial amidoxime reducing component 2 (Fragment) OS=Mus musculus OX=10090 GN=Mtarc2 PE=1 SV=1; Mitochondrial amidoxime reducing component 2 OS=Mus musculus OX=10090 GN=Mtarc2 PE=1 SV=1 1 3 3 0.4825 0 1 1 1 372.88934 1116.65348 1116.65091 2.3 0.00085 0/0 0 0 34065636 HCD 30 MS2 40.80704 402.1 27.081 40.0798 9693 9693 9687 QEplus033719.raw F4 509.2 268.3 434.6 365.9 430.6 404.2 307 2.86 1 FALSE 0.002421 0.04811 0.148 -250 33366 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVEHNIR [R].vVEHNIR.[I] N-Term(TMT6plex) 4 Q9D8W5 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=4 Q3U8F5; Q9D8W5; B1AT36; Q3TRH2 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd12 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=4; 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=1 0 3 3 0.4721 0 1 1 1 365.88736 1095.64753 1095.64721 0.29 0.00011 0/0 0 0 8060992.5 HCD 30 MS2 78.34676 780.3 44.363 40.0984 9700 9700 9698 QEplus033719.raw F4 978.9 387 695.5 1093.7 580.7 946.1 104 2.33 1 FALSE 0.001351 0.01916 0.288 -250 33390 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YAVEGR [R].yAVEGR.[D] N-Term(TMT6plex) 4 Q9CPW5 Translocon-associated protein subunit beta OS=Mus musculus OX=10090 GN=Ssr2 PE=1 SV=1 Q9CPW5; A0A0A6YWA8; A0A0A6YVZ1; A0A0A6YXB7 Translocon-associated protein subunit beta OS=Mus musculus OX=10090 GN=Ssr2 PE=1 SV=1; Translocon-associated protein subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Ssr2 PE=1 SV=1; Translocon-associated protein subunit beta OS=Mus musculus OX=10090 GN=Ssr2 PE=1 SV=1; Translocon-associated protein subunit beta OS=Mus musculus OX=10090 GN=Ssr2 PE=1 SV=1 0 2 2 0.3744 0 1 1 1 462.26062 923.51396 923.5148 -0.9 -0.00042 0/0 0 0 22436380 HCD 30 MS2 23.71118 977.9 71.727 40.1052 9703 9703 9698 QEplus033719.raw F4 912.2 877.6 1119.7 886.5 1073.7 997.6 94 2.19 1 FALSE 0.003278 0.06389 0.104 -250 33406 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMGTMNR [K].aMGTMNR.[Q] N-Term(TMT6plex) 1 Q9DB34 Charged multivesicular body protein 2a OS=Mus musculus OX=10090 GN=Chmp2a PE=1 SV=1 Q9DB34 Charged multivesicular body protein 2a OS=Mus musculus OX=10090 GN=Chmp2a PE=1 SV=1 0 2 2 0.5314 0 1 1 1 505.25925 1009.51122 1009.51204 -0.81 -0.00041 0/0 0 0 12996498 HCD 30 MS2 16.53788 1000.4 110 40.1101 9705 9705 9698 QEplus033719.raw F4 1098.2 818.4 1037.3 859.6 1209.4 979.3 112 2.07 1 FALSE 0.0007816 0.01086 0.391 -250 33427 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRESITR [R].vRESITR.[T] N-Term(TMT6plex) 1 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 1 2 2 0.355 0 1 1 1 545.33289 1089.65849 1089.65777 0.66 0.00036 0/0 0 0 8521848 HCD 30 MS2 40.41047 448.2 110 40.1175 9708 9708 9698 QEplus033719.raw F4 483.4 402.7 451.8 359.2 552.9 439.1 242 1.69 1 FALSE 0.002594 0.05136 0.138 -250 33436 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPPPSYGGSSR [R].gPPPSYGGSSR.[Y] N-Term(TMT6plex) 4 Q9WV02; Q91VM5 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1;RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" A0A2I3BRL8; Q9WV02; Q91VM5; S4R1F6 "Predicted gene 7324 OS=Mus musculus OX=10090 GN=Gm7324 PE=4 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1" 0 2 2 0.5926 0 1 1 1 645.83649 1290.6657 1290.66398 1.33 0.00086 0/0 0 0 10075821 HCD 30 MS2 0 358.7 110 40.1248 9710 9710 9709 QEplus033719.raw F4 356.2 375.1 391.6 271 463.2 294.8 199 2.7 2 FALSE 1.14E-05 7.80E-06 1.068 -250 33450 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLAQAAR [R].sLAQAAR.[G] N-Term(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.2562 0 1 1 1 473.28854 945.56981 945.5679 2.03 0.00096 0/0 0 0 58178316 HCD 30 MS2 33.49152 635.2 17.592 40.1319 9713 9713 9709 QEplus033719.raw F4 701.4 520 636.1 537.2 809.8 606.9 149 2.03 1 FALSE 0.008027 0.1341 -0.066 -250 33472 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WVQSHR [K].wVQSHR.[D] N-Term(TMT6plex) 2 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 B9EIU1; Q8CGC7 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4 0 2 2 0.2206 0 1 1 1 521.29407 1041.58086 1041.57913 1.66 0.00086 0/0 0 0 13624588 HCD 30 MS2 15.24862 695.8 110 40.1414 9717 9717 9709 QEplus033719.raw F4 838.4 482.5 661.2 693.4 775.4 723.9 116 2.04 1 FALSE 0.009517 0.1794 -0.117 -250 33480 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQIEPGSR [R].tQIEPGSR.[T] N-Term(TMT6plex) 1 Q8R2Y8 "Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ptrh2 PE=1 SV=1" Q8R2Y8 "Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ptrh2 PE=1 SV=1" 0 2 2 0.4519 0 1 1 1 558.81458 1116.62187 1116.62105 0.74 0.00041 0/0 0 0 13186822 HCD 30 MS2 57.17632 506.4 54.397 40.1436 9718 9718 9709 QEplus033719.raw F4 521.3 431.7 542.5 439.2 557.4 546 356 2.39 1 FALSE 0.0008183 0.01118 0.386 -250 33498 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTDSDTQDANDSSCK [R].dTDSDTQDANDSSck.[S] N-Term(TMT6plex); C14(Carbamidomethyl); K15(TMT6plex) 11 B1AZP2 Disks large-associated protein 4 OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1 B1AZP2-3; I1E4X0; E9PUF2; F6YMR0; B1AZP2; B7ZNS2; Q3UCF7; B1AZP2-2; H3BL90; H3BKJ0; H3BJW9 Isoform 3 of Disks large-associated protein 4 OS=Mus musculus OX=10090 GN=Dlgap4; Disks large-associated protein 4 OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1; Disks large-associated protein 4 OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1; Disks large-associated protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=2; Disks large-associated protein 4 OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1; Disks large-associated protein 4 OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Dlgap4 PE=2 SV=1; Isoform 2 of Disks large-associated protein 4 OS=Mus musculus OX=10090 GN=Dlgap4; Disks large-associated protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1; Disks large-associated protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1; Disks large-associated protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Dlgap4 PE=1 SV=1 0 3 3 0.8708 0 1 1 1 706.31543 2116.93174 2116.93409 -1.11 -0.00079 0/0 0 0 5329740.5 HCD 30 MS2 0 130.7 110 40.156 9722 9722 9720 QEplus033719.raw F4 130.5 80.9 166.8 131.3 84.2 190.2 18 6.19 1 FALSE 1.14E-05 2.19E-11 2.122 -250 33503 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTGIQEMR [K].rTGIQEMR.[E] N-Term(TMT6plex) 6 Q80W39 "Splicing factor 3b, subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1" Q80W39; Q3UAI4; Q3UBH2; Q3UQU5; Q8BL33; Q3UJB0 "Splicing factor 3b, subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; SAP domain-containing protein OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; SAP domain-containing protein OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; SAP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; PSP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; Splicing factor 3b, subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=1 SV=1" 1 3 3 0.5206 0 1 1 1 407.23077 1219.67777 1219.67786 -0.07 -0.00003 0/0 0 0 50695704 HCD 30 MS2 28.29633 250.5 22.63 40.1582 9723 9723 9720 QEplus033719.raw F4 269.6 209.4 272.8 211.8 280 259.3 341 3.15 1 FALSE 1.14E-05 1.85E-05 0.997 -250 33513 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMFGGSGTSSRPSSNR [R].rMFGGSGTSSRPSSNR.[S] N-Term(TMT6plex) 8 Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; A2AKJ2; Q3U6S1; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 1 4 4 0.6271 0 1 1 1 478.99677 1912.96523 1912.96091 2.26 0.00108 0/0 0 0 41961732 HCD 30 MS2 14.63741 281.8 45.642 40.1605 9724 9724 9720 QEplus033719.raw F4 296.3 284.3 309.1 209.6 320.2 271.4 246 4.72 1 FALSE 1.14E-05 1.65E-08 1.576 -250 33520 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASQASQEY [K].aSQASQEY.[-] N-Term(TMT6plex) 1 P27661 Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 P27661 Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 0 2 2 0.6426 0 1 1 1 556.77509 1112.54289 1112.54213 0.68 0.00038 0/0 0 0 37740428 HCD 30 MS2 20.25731 178.4 40.079 40.1627 9725 9725 9720 QEplus033719.raw F4 198 180.4 181.7 119.8 246.7 144 77 2.77 1 FALSE 0.0023 0.04566 0.155 -250 33527 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AELDGSER [R].aELDGSER.[K] N-Term(TMT6plex) 7 Q8R5G0 Nidogen 2 protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1 Q8C6Z2; Q8R5G0; A0A286YCQ5; Q3US45; Q3TPN0; Q8CFA3; O88322 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen 2 protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen-2 (Fragment) OS=Mus musculus OX=10090 GN=Nid2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen-2 OS=Mus musculus OX=10090 GN=NID-2 PE=4 SV=1; Nidogen-2 OS=Mus musculus OX=10090 GN=Nid2 PE=1 SV=2 0 2 2 0.5 0 1 1 1 553.28839 1105.56951 1105.56868 0.74 0.00041 0/0 0 0 37320196 HCD 30 MS2 10.24972 685.8 47.822 40.165 9726 9726 9720 QEplus033719.raw F4 614.5 621.5 889.7 668.2 547.7 773 175 2.76 1 FALSE 1.14E-05 0.0001494 0.824 -250 33533 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVQAMNR [R].aVQAMNR.[I] N-Term(TMT6plex) 3 Q64520 Guanylate kinase OS=Mus musculus OX=10090 GN=Guk1 PE=1 SV=2 Q64520; Q64520-2; E9Q7K1 Guanylate kinase OS=Mus musculus OX=10090 GN=Guk1 PE=1 SV=2; Isoform 2 of Guanylate kinase OS=Mus musculus OX=10090 GN=Guk1; Guanylate kinase OS=Mus musculus OX=10090 GN=Guk1 PE=1 SV=1 0 2 2 0.399 0 1 1 1 509.78619 1018.56511 1018.56652 -1.38 -0.0007 0/0 0 0 24245060 HCD 30 MS2 41.59915 773.7 40.534 40.1673 9727 9727 9720 QEplus033719.raw F4 703.6 653.7 890.1 658.3 803.1 933.3 262 2.03 1 FALSE 0.0004793 0.007604 0.446 -250 33543 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGDEYDNHCGK [K].gGDEYDNHcGk.[E] N-Term(TMT6plex); C9(Carbamidomethyl); K11(TMT6plex) 2 Q3UF03 Uncharacterized protein OS=Mus musculus OX=10090 GN=M6pr PE=2 SV=1 Q3UF03; P24668 Uncharacterized protein OS=Mus musculus OX=10090 GN=M6pr PE=2 SV=1; Cation-dependent mannose-6-phosphate receptor OS=Mus musculus OX=10090 GN=M6pr PE=1 SV=1 0 3 3 0.7704 0 1 1 1 570.60376 1709.79673 1709.79535 0.8 0.00046 0/0 0 0 17322214 HCD 30 MS2 26.60262 801.9 110 40.1698 9728 9728 9720 QEplus033719.raw F4 827 600.9 796.8 844.6 935.4 806.4 45 4.05 1 FALSE 1.14E-05 5.28E-09 1.67 -250 33551 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRPGPVAGHSQMPR [K].gRPGPVAGHSQMPR.[V] N-Term(TMT6plex) 6 Q3UPL0 Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2 S4R1Y8; Q3UPL0; Q3UPL0-2; Q05DS7; S4R2A9; S4R256 Protein transport protein Sec31A (Fragment) OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=1; Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2; Isoform 2 of Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a; Sec31a protein (Fragment) OS=Mus musculus OX=10090 GN=Sec31a PE=2 SV=1; Protein transport protein Sec31A (Fragment) OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=1; Protein transport protein Sec31A (Fragment) OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=1 0 4 4 0.6955 0 1 1 1 419.7309 1675.90175 1675.90121 0.33 0.00014 0/0 0 0 13076875 HCD 30 MS2 35.38003 472.2 99.055 40.1743 9730 9730 9720 QEplus033719.raw F4 517.2 490.7 485.5 416.9 456.4 466.5 394 4.86 1 FALSE 1.14E-05 4.83E-09 1.677 -250 33558 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDDEVVQR [R].tDDEVVQR.[E] N-Term(TMT6plex) 3 Q3UBU0 HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1 Q3UBU0; Q91V38; P08113 "HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Heat shock protein 90, beta (Grp94), member 1 OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Endoplasmin OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=2" 0 2 2 0.5701 0 1 1 1 595.81427 1190.62126 1190.62145 -0.15 -0.00009 0/0 0 0 15382487 HCD 30 MS2 0 500.5 110 40.1816 9732 9732 9731 QEplus033719.raw F4 522.2 413.5 525.1 459.7 530.5 551.8 173 3.14 1 FALSE 1.14E-05 0.0001369 0.831 -250 33566 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGAARPNGPAAGNK [R].gGAARPNGPAAGNk.[I] N-Term(TMT6plex); K14(TMT6plex) 5 P35278 Ras-related protein Rab-5C OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=2 P35278; A2A5F6; Q3TCT9; Q8C266; A2A5F5 Ras-related protein Rab-5C OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=2; Ras-related protein Rab-5C (Fragment) OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=8; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab5c PE=2 SV=1; Ras-related protein Rab-5C OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=1; Ras-related protein Rab-5C (Fragment) OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=1 0 3 3 0.5903 0 1 1 1 565.99335 1695.96549 1695.96547 0.01 0.00001 0/0 0 0 13355664 HCD 30 MS2 6.532142 695.7 110 40.1841 9733 9733 9731 QEplus033719.raw F4 709.9 609.6 802.5 520 782.4 749.9 389 2.88 1 FALSE 1.14E-05 9.82E-07 1.239 -250 33588 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMFGGSGTSSRPSSNR [R].rMFGGSGTSSRPSSNR.[S] N-Term(TMT6plex) 8 Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; A2AKJ2; Q3U6S1; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 1 3 3 0.5833 0 1 1 1 638.3244 1912.95865 1912.96091 -1.18 -0.00075 0/0 0 0 8121177 HCD 30 MS2 0 114.5 110 40.1937 9737 9737 9731 QEplus033719.raw F4 128.9 111.3 121.8 73.9 136.6 114.3 225 2.76 1 FALSE 1.14E-05 2.72E-08 1.535 -250 33591 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDAEEMAQR [K].gDAEEMAQR.[K] N-Term(TMT6plex) 14 O70318 Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2 Q811B2; B6ZHC6; O70318; B6ZHD0; Q80UE5; Q8CGJ6; Q80UE3; A0A1W2P7I4; Q80UE4; A0A1W2P6I5; B6ZHC5; B6ZHC7; Q8C928; Q3UNQ6 Epb4.1l2 protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Epb4.1l2 protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Protein 4.1G OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1 0 2 2 0.5668 0 1 1 1 618.29803 1235.58879 1235.58877 0.02 0.00001 0/0 0 0 8059152.5 HCD 30 MS2 5.355142 400.6 110 40.1962 9738 9738 9731 QEplus033719.raw F4 406.5 362.8 469.2 263.4 502.3 399.6 55 3.37 1 FALSE 1.14E-05 2.35E-06 1.167 -250 33597 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STGDVVAGR [K].sTGDVVAGR.[A] N-Term(TMT6plex) 5 Q3THP1 Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1 Q99KK7; Q3THP1; Q6NXZ0; Q3UDD5; Q8BU29 Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=1 SV=2; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1 0 2 2 0.4484 0 1 1 1 545.80695 1090.60661 1090.6054 1.11 0.00061 0/0 0 0 8019239 HCD 30 MS2 55.2707 614.5 110 40.1987 9739 9739 9731 QEplus033719.raw F4 663.6 498.7 641.5 555.6 671.4 656.2 262 2.81 1 FALSE 1.14E-05 1.75E-06 1.191 -250 33605 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEQAPQNK [K].eEQAPQNk.[I] N-Term(TMT6plex); K8(TMT6plex) 15 A0A1B0GSX0 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1 A0A1B0GQX5; A0A1B0GRS2; A0A1B0GT41; Q3TI99; D3YZQ9; Q3THB4; A0A1B0GRW9; A0A1B0GS79; A0A1B0GRC1; A0A1B0GSR9; Q3TCI7; Q6NXW3; A0A1B0GSX0; A0A1B0GSL7; P06151 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=2; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase A chain (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; Ldha protein OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3 0 2 2 0.6842 0 1 1 1 701.39136 1401.77544 1401.77381 1.16 0.00081 0/0 0 0 7746251.5 HCD 30 MS2 0 415 110 40.2012 9740 9740 9731 QEplus033719.raw F4 852.5 259.5 398.1 346.9 256.4 376.8 331 3.23 1 FALSE 1.14E-05 9.85E-05 0.858 -250 33607 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGQGAFGNMCR [R].sGQGAFGNmcR.[G] N-Term(TMT6plex); M9(Oxidation); C10(Carbamidomethyl) 1 Q9D8E6 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3 Q9D8E6 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3 0 2 2 0.7578 0 1 1 1 715.32965 1429.65203 1429.65138 0.45 0.00032 0/0 0 0 5072543 HCD 30 MS2 0 148.7 110 40.2037 9741 9741 9731 QEplus033719.raw F4 149.7 129.6 182.3 123.4 154.1 152.8 37 2.89 1 FALSE 1.14E-05 1.93E-05 0.993 -250 33626 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECLQTCR [K].ecLQTcR.[T] N-Term(TMT6plex); C2(Carbamidomethyl); C6(Carbamidomethyl) 1 P00978 SWISS-PROT:P00978 (Bos taurus) AMBP protein precursor P00978 SWISS-PROT:P00978 (Bos taurus) AMBP protein precursor 0 2 2 0.5581 0 1 1 1 598.29126 1195.57524 1195.57609 -0.71 -0.00043 0/0 0 0 4054054.25 HCD 30 MS2 0 355.6 110 40.2135 9744 9744 9742 QEplus033719.raw F4 364.8 242.1 340.8 247.8 657.9 280 62 2.15 1 TRUE 0.002225 0.04278 0.165 -250 33632 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDREAQSICER [K].dDREAQSIcER.[V] N-Term(TMT6plex); C9(Carbamidomethyl) 10 Q5SWR1; Q5SVG5 AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=2 SV=1;AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=1 Q8CC13; Q5SWR1; Q5SVG5; O35643; H3BIY9; Q5SVG4; H3BKM0; Q9DBG3; Q3TVN4; Q3U1K9 AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=2 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=2 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=1; AP-1 complex subunit beta-1 OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=2; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1; AP-2 complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=2 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=2 SV=1 1 3 3 0.6913 0 1 1 1 536.59363 1607.76633 1607.7645 1.14 0.00061 0/0 0 0 49506128 HCD 30 MS2 9.700066 372.4 38.006 40.2158 9745 9745 9742 QEplus033719.raw F4 402.3 309.5 392.6 304.5 498.1 327.1 74 4.6 2 FALSE 1.14E-05 1.26E-08 1.598 -250 33638 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMMMQSGR [R].rMMMQSGR.[K] N-Term(TMT6plex) 3 Q8BVI9; P51881 ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a4 PE=2 SV=1;ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3 Q8BVI9; P48962; P51881 ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a4 PE=2 SV=1; ADP/ATP translocase 1 OS=Mus musculus OX=10090 GN=Slc25a4 PE=1 SV=4; ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3 1 3 3 0.4392 0 1 1 1 409.21063 1225.61734 1225.61652 0.67 0.00028 0/0 0 0 34455632 HCD 30 MS2 47.09388 391.1 22.546 40.2181 9746 9746 9742 QEplus033719.raw F4 361 361 436.3 388.3 374.8 425.4 122 3.78 2 FALSE 1.14E-05 9.56E-05 0.861 -250 33648 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGGANYDAQSE [K].aGGANYDAQSE.[-] N-Term(TMT6plex) 1 Q544F6 Cotl1 protein OS=Mus musculus OX=10090 GN=Cotl1 PE=1 SV=1 Q544F6 Cotl1 protein OS=Mus musculus OX=10090 GN=Cotl1 PE=1 SV=1 0 2 2 0.8822 0 1 1 1 656.30548 1311.60369 1311.60144 1.71 0.00112 0/0 0 0 10577745 HCD 30 MS2 19.72459 201.8 110 40.2228 9748 9748 9742 QEplus033719.raw F4 184.6 196.6 228.6 129.5 267.1 204.5 35 3.31 1 FALSE 1.14E-05 8.73E-05 0.868 -250 33665 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEALSR [K].eAEALSR.[T] N-Term(TMT6plex) 2 Q8CHP5 Partner of Y14 and mago OS=Mus musculus OX=10090 GN=Pym1 PE=1 SV=2 Q8CHP5-2; Q8CHP5 Isoform 2 of Partner of Y14 and mago OS=Mus musculus OX=10090 GN=Pym1; Partner of Y14 and mago OS=Mus musculus OX=10090 GN=Pym1 PE=1 SV=2 0 2 2 0.2351 0 1 1 1 502.78302 1004.55876 1004.55739 1.37 0.00069 0/0 0 0 21796514 HCD 30 MS2 51.95189 494.5 38.773 40.2323 9752 9752 9742 QEplus033719.raw F4 498.3 425.8 520.4 427.7 570 524.9 282 2.51 1 FALSE 5.44E-05 0.001894 0.604 -250 33672 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAVESGQADDERVR [K].sAVESGQADDERVR.[E] N-Term(TMT6plex) 3 Q61249 Immunoglobulin-binding protein 1 OS=Mus musculus OX=10090 GN=Igbp1 PE=1 SV=1 Q9QZ29; Q61249; A0A0B4J1F7 Immunoglobulin-binding protein 1b OS=Mus musculus OX=10090 GN=Igbp1b PE=1 SV=1; Immunoglobulin-binding protein 1 OS=Mus musculus OX=10090 GN=Igbp1 PE=1 SV=1; Immunoglobulin-binding protein 1b OS=Mus musculus OX=10090 GN=Igbp1b PE=1 SV=1 1 3 3 0.7496 0 1 1 1 583.29742 1747.87772 1747.87722 0.29 0.00017 0/0 0 0 13801980 HCD 30 MS2 6.083788 289.8 110 40.2396 9754 9754 9753 QEplus033719.raw F4 327.6 250.9 328.3 251.9 300.7 279.3 211 5.95 1 FALSE 1.14E-05 6.31E-16 3.765 -250 33679 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSLDASQGTATGPR [K].hSLDASQGTATGPR.[G] N-Term(TMT6plex) 3 Q8BKZ9 "Pyruvate dehydrogenase protein X component, mitochondrial OS=Mus musculus OX=10090 GN=Pdhx PE=1 SV=1" A2AWH7; A2AWH8; Q8BKZ9 "Pyruvate dehydrogenase protein X component, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Pdhx PE=1 SV=1; Pyruvate dehydrogenase protein X component, mitochondrial OS=Mus musculus OX=10090 GN=Pdhx PE=1 SV=1; Pyruvate dehydrogenase protein X component, mitochondrial OS=Mus musculus OX=10090 GN=Pdhx PE=1 SV=1" 0 3 3 0.583 0 1 1 1 542.95178 1626.84079 1626.83971 0.66 0.00036 0/0 0 0 9082633 HCD 30 MS2 9.239305 265.1 110 40.2421 9755 9755 9753 QEplus033719.raw F4 287.6 158.2 272.1 299.7 282.9 290.3 227 5.3 1 FALSE 1.14E-05 1.24E-11 2.169 -250 33684 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RHTPLSK [K].rHTPLSk.[L] N-Term(TMT6plex); K7(TMT6plex) 10 G3UWX9; P61957 Small ubiquitin-related modifier 3 OS=Mus musculus OX=10090 GN=Sumo3 PE=4 SV=1;Small ubiquitin-related modifier 2 OS=Mus musculus OX=10090 GN=Sumo2 PE=1 SV=1 Q9Z172-2; H7BWX9; G3UWX9; G3UZA7; G3UZ60; Q9Z172; G3UZX6; D3Z794; P61957; G3UWI9 "Isoform 2 of Small ubiquitin-related modifier 3 OS=Mus musculus OX=10090 GN=Sumo3; Small ubiquitin-related modifier 2 OS=Mus musculus OX=10090 GN=Sumo2 PE=1 SV=1; Small ubiquitin-related modifier 3 OS=Mus musculus OX=10090 GN=Sumo3 PE=4 SV=1; Small ubiquitin-related modifier OS=Mus musculus OX=10090 GN=Sumo3 PE=1 SV=1; Predicted gene, 49325 OS=Mus musculus OX=10090 GN=Gm49325 PE=4 SV=1; Small ubiquitin-related modifier 3 OS=Mus musculus OX=10090 GN=Sumo3 PE=1 SV=1; Small ubiquitin-related modifier 3 (Fragment) OS=Mus musculus OX=10090 GN=Sumo3 PE=4 SV=1; Small ubiquitin-related modifier 2 OS=Mus musculus OX=10090 GN=Sumo2 PE=1 SV=1; Small ubiquitin-related modifier 2 OS=Mus musculus OX=10090 GN=Sumo2 PE=1 SV=1; Small ubiquitin-related modifier 3 OS=Mus musculus OX=10090 GN=Sumo3 PE=4 SV=1" 1 3 3 0.5524 0 1 1 1 432.94363 1296.81635 1296.81523 0.87 0.00037 0/0 0 0 49753832 HCD 30 MS2 34.0765 516 20.431 40.2466 9757 9757 9753 QEplus033719.raw F4 593.9 356.8 512.9 594.9 609.4 427.8 175 3.15 2 FALSE 0.000262 0.005268 0.495 -250 33700 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEQAPQNK [K].eEQAPQNk.[I] N-Term(TMT6plex); K8(TMT6plex) 15 A0A1B0GSX0 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1 A0A1B0GQX5; A0A1B0GRS2; A0A1B0GT41; Q3TI99; D3YZQ9; Q3THB4; A0A1B0GRW9; A0A1B0GS79; A0A1B0GRC1; A0A1B0GSR9; Q3TCI7; Q6NXW3; A0A1B0GSX0; A0A1B0GSL7; P06151 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=2; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase A chain (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; Ldha protein OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3 0 3 3 0.6343 0 1 1 1 467.93011 1401.77579 1401.77381 1.41 0.00066 0/0 0 0 23869498 HCD 30 MS2 36.83693 418.5 36.613 40.2534 9760 9760 9753 QEplus033719.raw F4 666.7 235.6 389.2 423.8 336.1 459.5 340 3.09 1 FALSE 0.002015 0.03528 0.193 -250 33717 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQQEELETDHGAGDR [R].qQQEELETDHGAGDR.[S] N-Term(TMT6plex) 1 O54825 Bystin OS=Mus musculus OX=10090 GN=Bysl PE=1 SV=3 O54825 Bystin OS=Mus musculus OX=10090 GN=Bysl PE=1 SV=3 0 3 3 0.8654 0 1 1 1 647.97516 1941.91092 1941.90998 0.49 0.00032 0/0 0 0 5984240 HCD 30 MS2 0 130.4 110 40.2677 9765 9765 9764 QEplus033719.raw F4 147.5 106.5 133.3 98 167.7 129.4 71 6.54 1 FALSE 1.14E-05 6.31E-16 3.144 -250 33722 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDELTR [R].cDELTR.[K] N-Term(TMT6plex); C1(Carbamidomethyl) 8 Q5U222 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1 Q9CSD9; Q3UXW3; Q5U222; Q3V0Z8; A1L333; S4R1I6; Q61656; Q8BTS0 Helicase C-terminal domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 0 2 2 0.5093 0 1 1 1 511.76108 1022.51488 1022.51381 1.04 0.00053 0/0 0 0 22118094 HCD 30 MS2 17.13542 899.6 110 40.2727 9767 9767 9764 QEplus033719.raw F4 916.4 846.9 1007.4 670 1021.3 935.5 131 2.14 1 FALSE 0.002705 0.05397 0.131 -250 33729 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMMMQSGR [R].rMMMQSGR.[K] N-Term(TMT6plex) 3 Q8BVI9; P51881 ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a4 PE=2 SV=1;ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3 Q8BVI9; P48962; P51881 ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a4 PE=2 SV=1; ADP/ATP translocase 1 OS=Mus musculus OX=10090 GN=Slc25a4 PE=1 SV=4; ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3 1 2 2 0.5209 0 1 1 1 613.31238 1225.61748 1225.61652 0.78 0.00048 0/0 0 0 12177838 HCD 30 MS2 21.76578 244.2 110 40.2752 9768 9768 9764 QEplus033719.raw F4 229.5 217.1 270.9 221.7 248.4 277.5 122 2.15 2 FALSE 0.001744 0.02993 0.217 -250 33740 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SANSDPNTSSKPESTR [R].sANSDPNTSSkPESTR.[V] N-Term(TMT6plex); K11(TMT6plex) 7 Q3UPZ9 B-block_TFIIIC domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gtf3c1 PE=2 SV=1 Q3UPZ9; Q8K284-2; Q3UHL0; Q8K284; Q3UTP3; Q3UQ70; A0A0U1RPD8 B-block_TFIIIC domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gtf3c1 PE=2 SV=1; Isoform 2 of General transcription factor 3C polypeptide 1 OS=Mus musculus OX=10090 GN=Gtf3c1; B-block_TFIIIC domain-containing protein OS=Mus musculus OX=10090 GN=Gtf3c1 PE=2 SV=1; General transcription factor 3C polypeptide 1 OS=Mus musculus OX=10090 GN=Gtf3c1 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Gtf3c1 PE=2 SV=1; B-block_TFIIIC domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gtf3c1 PE=2 SV=1; General transcription factor 3C polypeptide 1 OS=Mus musculus OX=10090 GN=Gtf3c1 PE=1 SV=1 0 3 3 0.5995 0 1 1 1 712.70331 2136.09537 2136.09331 0.96 0.00069 0/0 0 0 2988833.25 HCD 30 MS2 0 126.6 110 40.2802 9770 9770 9764 QEplus033719.raw F4 129 117.5 138.9 103.3 149.4 121.5 303 3.82 1 FALSE 1.14E-05 4.12E-10 1.88 -250 33775 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSGCSTPSGVDCGSGR [R].tSGcSTPSGVDcGSGR.[S] N-Term(TMT6plex); C4(Carbamidomethyl); C12(Carbamidomethyl) 1 A0A1B0GSX6 PDZ and LIM domain protein 3 OS=Mus musculus OX=10090 GN=Pdlim3 PE=1 SV=1 A0A1B0GSX6 PDZ and LIM domain protein 3 OS=Mus musculus OX=10090 GN=Pdlim3 PE=1 SV=1 0 2 2 0.8136 0 1 1 1 907.40454 1813.80181 1813.80063 0.65 0.00059 0/0 0 0 4737116 HCD 30 MS2 15.17996 112.9 110 40.2973 9776 9776 9775 QEplus033719.raw F4 123.8 15.7 54.7 311.8 16.4 154.8 27 4.56 1 FALSE 1.14E-05 6.04E-14 2.608 -250 33781 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMFGGSGTSSRPSSNR [R].rMFGGSGTSSRPSSNR.[S] N-Term(TMT6plex) 8 Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; A2AKJ2; Q3U6S1; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 1 2 2 0.6233 0 1 1 1 956.98627 1912.96526 1912.96091 2.27 0.00218 0/0 0 0 3260972.75 HCD 30 MS2 0 13.2 110 40.2999 9777 9777 9775 QEplus033719.raw F4 10.1 14 16.7 10.3 17.9 10.3 247 2.23 1 FALSE 0.0003211 0.006282 0.473 -250 33788 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CSGPGLER [K].cSGPGLER.[A] N-Term(TMT6plex); C1(Carbamidomethyl) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.3974 0 1 1 1 552.78815 1104.56902 1104.56691 1.91 0.00105 0/0 0 0 36135280 HCD 30 MS2 28.31551 721.1 35.835 40.3044 9779 9779 9775 QEplus033719.raw F4 699.2 829.7 823.7 516.2 842.8 615.1 169 2.34 1 FALSE 0.0006216 0.009293 0.416 -250 33807 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGAARPNGPAAGNK [R].gGAARPNGPAAGNk.[I] N-Term(TMT6plex); K14(TMT6plex) 5 P35278 Ras-related protein Rab-5C OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=2 P35278; A2A5F6; Q3TCT9; Q8C266; A2A5F5 Ras-related protein Rab-5C OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=2; Ras-related protein Rab-5C (Fragment) OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=8; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab5c PE=2 SV=1; Ras-related protein Rab-5C OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=1; Ras-related protein Rab-5C (Fragment) OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=1 0 4 4 0.4756 0 1 1 1 424.74728 1695.96731 1695.96547 1.08 0.00046 0/0 0 0 3355749.25 HCD 30 MS2 81.40154 403.2 110 40.3117 9782 9782 9775 QEplus033719.raw F4 485.9 294 412.4 341.9 516.4 368.8 382 2.25 1 FALSE 1.14E-05 7.13E-05 0.885 -250 33814 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVQPTSGEPR [K].aVQPTSGEPR.[Q] N-Term(TMT6plex) 6 A0A1L1SQ51 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1 Q71LX4; Q68FD6; A0A1L1SQ51; B2RY15; E9PUM4; Q3TN69 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=3; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1 0 2 2 0.5461 0 1 1 1 635.85162 1270.69597 1270.69528 0.54 0.00035 0/0 0 0 2864309.5 HCD 30 MS2 22.84249 193.8 110 40.3142 9783 9783 9775 QEplus033719.raw F4 198.4 159.9 198.9 167.7 241 197.2 243 2.82 1 FALSE 1.14E-05 0.0007633 0.686 -250 33844 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSHSESSPDGEVK [R].qSHSESSPDGEVk.[S] N-Term(TMT6plex); K13(TMT6plex) 3 Q8BTI8 Serine/arginine repetitive matrix protein 2 OS=Mus musculus OX=10090 GN=Srrm2 PE=1 SV=3 Q8BTI8; Q8BTI8-2; Q8BTI8-3 Serine/arginine repetitive matrix protein 2 OS=Mus musculus OX=10090 GN=Srrm2 PE=1 SV=3; Isoform 2 of Serine/arginine repetitive matrix protein 2 OS=Mus musculus OX=10090 GN=Srrm2; Isoform 3 of Serine/arginine repetitive matrix protein 2 OS=Mus musculus OX=10090 GN=Srrm2 0 3 3 0.7683 0 1 1 1 615.65259 1844.94321 1844.93904 2.26 0.00139 0/0 0 0 4932974.5 HCD 30 MS2 60.50949 289.9 110 40.329 9788 9788 9786 QEplus033719.raw F4 263.8 323.5 267.1 249.7 402.2 233.4 283 4.1 1 FALSE 1.14E-05 5.87E-12 2.231 -250 33851 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVAAPRPDR [K].aVAAPRPDR.[L] N-Term(TMT6plex) 10 Q3U1S6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1 Q3UJ74; A0A0G2JF72; Q3U1S6; Q8JZN2; Q8R3R1; Q3U672; Q3U4S7; Q3TXH7; Q80TP8; Q05C63 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Csde1 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; MKIAA0885 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Csde1 protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1 0 3 3 0.4456 0 1 1 1 394.57019 1181.69602 1181.69522 0.67 0.00027 0/0 0 0 55006404 HCD 30 MS2 17.39421 379 19.652 40.3312 9789 9789 9786 QEplus033719.raw F4 361.5 270.6 412.1 297.2 443 489.4 285 2.85 1 FALSE 7.59E-05 0.002732 0.568 -250 33860 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDSPNLR [K].eDSPNLR.[E] N-Term(TMT6plex) 2 O09131 Glutathione S-transferase omega-1 OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=2 O09131; A0A494BAB1 Glutathione S-transferase omega-1 OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=2; Glutathione-dependent dehydroascorbate reductase OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=1 0 2 2 0.2732 0 1 1 1 530.28333 1059.55937 1059.5632 -3.61 -0.00191 0/0 0 0 5819883 HCD 30 MS2 40.06198 676.3 110 40.336 9791 9791 9786 QEplus033719.raw F4 684.6 593.6 735.4 645.2 614.4 784.8 147 1.94 1 FALSE 0.001429 0.02053 0.277 -250 33866 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQVAEHPR [R].vQVAEHPR.[L] N-Term(TMT6plex) 3 Q3U3H5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Galk2 PE=1 SV=1 Q3U3H5; B7ZCT4; Q8BWB2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Galk2 PE=1 SV=1; N-acetylgalactosamine kinase (Fragment) OS=Mus musculus OX=10090 GN=Galk2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Galk2 PE=2 SV=1 0 3 3 0.6651 0 1 1 1 388.89459 1164.66922 1164.66867 0.47 0.00018 0/0 0 0 7681039 HCD 30 MS2 51.4835 420.5 110 40.3385 9792 9792 9786 QEplus033719.raw F4 458.7 302.5 443.8 416.7 462 439.2 317 4.24 1 FALSE 1.14E-05 0.0001264 0.838 -250 33886 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVAAPRPDR [K].aVAAPRPDR.[L] N-Term(TMT6plex) 10 Q3U1S6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1 Q3UJ74; A0A0G2JF72; Q3U1S6; Q8JZN2; Q8R3R1; Q3U672; Q3U4S7; Q3TXH7; Q80TP8; Q05C63 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Csde1 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; MKIAA0885 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Csde1 protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1 0 2 2 0.3235 0 1 1 1 591.35168 1181.69609 1181.69522 0.74 0.00044 0/0 0 0 3785998 HCD 30 MS2 33.31733 351.8 110 40.346 9795 9795 9786 QEplus033719.raw F4 345 280.3 379.5 308.7 367.6 429.6 285 2.04 1 FALSE 0.004122 0.07583 0.072 -250 33897 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASDAGVYR [R].aSDAGVYR.[C] N-Term(TMT6plex) 10 G3XA35 Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1 Q8BS97; Q4VA91; E9QMK3; E9PYH0; Q3TNR6; G3XA35; Q05CR7; E9QMK2; Q3TQ47; Q3UXS4 Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Versican OS=Mus musculus OX=10090 GN=Vcan PE=2 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Vcan PE=2 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Vcan protein (Fragment) OS=Mus musculus OX=10090 GN=Vcan PE=2 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Vcan PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Vcan PE=2 SV=1 0 2 2 0.4338 0 1 1 1 534.28802 1067.56877 1067.56829 0.45 0.00024 0/0 0 0 37180980 HCD 30 MS2 10.32827 539.2 32.551 40.3558 9798 9798 9797 QEplus033719.raw F4 441.8 547.3 599.3 531.3 567.3 548 102 2.72 1 FALSE 1.14E-05 0.0003657 0.749 -250 33905 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDTSGDYRK [K].gDTSGDYRk.[V] N-Term(TMT6plex); K9(TMT6plex) 3 Q7TMN7 Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1 Q7TMN7; F7ANV6; P97429 Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin A4 OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=4 1 3 3 0.4293 0 1 1 1 486.26328 1456.77527 1456.77963 -2.99 -0.00145 0/0 0 0 20506458 HCD 30 MS2 46.67233 1159.3 89.891 40.3631 9800 9800 9799 QEplus033719.raw F4 1446.7 1018.5 1343.9 1009.8 1146.6 990.5 247 2.05 1 FALSE 0.001429 0.02054 0.277 -250 33912 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPMPPNR [R].gPMPPNR.[I] N-Term(TMT6plex) 6 Q99MR6 Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1 Q99MR6-3; Q99MR6; Q99MR6-4; A0A0G2JDF8; Q99MR6-2; A0A0G2JG65 Isoform C of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1; Isoform D of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Arsenite-resistance protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1; Isoform B of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Arsenite-resistance protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1 0 2 2 0.4734 0 1 1 1 499.27667 997.54607 997.54505 1.02 0.00051 0/0 0 0 3659583.25 HCD 30 MS2 37.7924 504.6 110 40.3656 9801 9801 9799 QEplus033719.raw F4 525.1 414.2 565.1 427.1 534.1 562 79 2.07 1 FALSE 0.001559 0.0236 0.254 -250 33917 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAEQAER [RK].lAEQAER.[Y] N-Term(TMT6plex) 19 P68510; P68254; A8IP69; Q9CQV8; P63101; P62259 14-3-3 protein eta OS=Mus musculus OX=10090 GN=Ywhah PE=1 SV=2;14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1;14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3;14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Mus musculus OX=10090 GN=Ywhae PE=1 SV=1 Q8BJH3; P68510; P68254; D3YW45; O70456; A0A2I3BQ03; Q9CQV8-2; A8IP69; Q9CQV8; Q8BWN0; Q9JJ20; D3YXN6; A2A5N1; D3YXF4; D6REF3; P68254-2; P63101; P62259; Q8BPH1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ywhah PE=2 SV=1; 14-3-3 protein eta OS=Mus musculus OX=10090 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq PE=1 SV=1; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; 14-3-3 protein sigma OS=Mus musculus OX=10090 GN=Sfn PE=1 SV=2; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; Isoform Short of 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab; 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1; 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3; 14_3_3 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; 14-3-3 protein sigma OS=Mus musculus OX=10090 GN=Sfn PE=2 SV=1; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; 14-3-3 protein beta/alpha (Fragment) OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=1; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=8; 14-3-3 protein epsilon OS=Mus musculus OX=10090 GN=Ywhae PE=1 SV=1; Isoform 2 of 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq; 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Mus musculus OX=10090 GN=Ywhae PE=1 SV=1; 14_3_3 domain-containing protein OS=Mus musculus OX=10090 GN=Ywhae PE=2 SV=1 0 2 2 0.4504 0 1 1 1 523.29449 1045.58171 1045.58394 -2.13 -0.00111 0/0 0 0 95731256 HCD 30 MS2 37.02489 626.8 7.503 40.3679 9802 9802 9799 QEplus033719.raw F4 620.6 527.9 665.4 579.8 710.8 656.4 260 2.62 6 FALSE 0.001074 0.01394 0.346 -250 33932 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVTGYR [KR].aVTGYR.[D] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.398 0 1 1 1 448.26373 895.52019 895.51988 0.34 0.00015 0/0 0 0 11441365 HCD 30 MS2 32.96141 760.8 89.156 40.3727 9804 9804 9799 QEplus033719.raw F4 856.1 610.6 782.3 717.1 805.3 793.2 46 1.96 2 FALSE 0.004774 0.0837 0.052 -250 33961 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNVNDGVAQSTR [K].sNVNDGVAQSTR.[I] N-Term(TMT6plex) 3 P17751 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5 H7BXC3; P17751; P17751-2 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=1; Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5; Isoform 2 of Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 0 2 2 0.6957 0 1 1 1 738.88281 1476.75835 1476.7604 -1.39 -0.00103 0/0 0 0 2780596.5 HCD 30 MS2 0 162.5 110 40.3826 9808 9808 9799 QEplus033719.raw F4 164.8 105.8 173.4 181.1 147.5 202.2 204 2.99 1 FALSE 1.14E-05 1.82E-09 1.758 -250 33977 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEGYEVAHGGR [K].aEGYEVAHGGR.[C] N-Term(TMT6plex) 2 Q60676 Serine/threonine-protein phosphatase 5 OS=Mus musculus OX=10090 GN=Ppp5c PE=1 SV=3 Q60676; F7BX26 Serine/threonine-protein phosphatase 5 OS=Mus musculus OX=10090 GN=Ppp5c PE=1 SV=3; Serine/threonine-protein phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Ppp5c PE=1 SV=1 0 2 2 0.5633 0 1 1 1 687.85168 1374.69609 1374.69634 -0.18 -0.00013 0/0 0 0 1445970.75 HCD 30 MS2 0 122.2 110 40.3924 9811 9811 9810 QEplus033719.raw F4 124.6 109.7 126.2 101.5 148.5 122.8 144 3.32 1 FALSE 1.14E-05 1.71E-07 1.383 -250 33990 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASGPGLER [R].aSGPGLER.[G] N-Term(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.4239 0 1 1 1 508.29077 1015.57427 1015.57337 0.88 0.00045 0/0 0 0 22742384 HCD 30 MS2 20.61273 620.5 55.079 40.3972 9813 9813 9810 QEplus033719.raw F4 494.3 317.8 592.7 529.8 389.9 1398.4 155 2.76 1 FALSE 0.0003312 0.006353 0.471 -250 34002 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNQWNTR [R].dNQWNTR.[Q] N-Term(TMT6plex) 6 A0A0A0MQ79 Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1 A0A0A0MQ79; S4R294; S4R2J9; Q3TLH4; S4R209; Q3TLH4-5 Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=3; Protein PRRC2C (Fragment) OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Isoform 5 of Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c 0 2 2 0.4813 0 1 1 1 581.79456 1162.58183 1162.58025 1.36 0.00079 0/0 0 0 4471798.5 HCD 30 MS2 40.66159 371.2 110 40.4022 9815 9815 9810 QEplus033719.raw F4 461 282.4 364.5 296.9 479.9 342.8 115 2.41 1 FALSE 0.001134 0.01499 0.333 -250 34010 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAQDRDQIYR [R].aAQDRDQIYR.[R] N-Term(TMT6plex) 2 F8WJG3 Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1 F8WJG3; P62996 Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1; Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1 1 2 2 0.616 0 1 1 1 732.89081 1464.77434 1464.77566 -0.9 -0.00066 0/0 0 0 2358169 HCD 30 MS2 24.35672 109.2 110 40.4047 9816 9816 9810 QEplus033719.raw F4 114.7 108.8 136.7 67.8 113.3 114 301 2.5 1 FALSE 1.14E-05 2.31E-06 1.168 -250 34041 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGGPGLER [R].aGGPGLER.[AG] N-Term(TMT6plex) 7 Q80X90; B9EKP5 "Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3;Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; Q80X90; B7FAV1; B9EKP5; J3JS91; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.291 0 1 1 1 493.28494 985.56261 985.56281 -0.2 -0.0001 0/0 0 0 81249784 HCD 30 MS2 8.789362 504.5 14.624 40.4221 9822 9822 9821 QEplus033719.raw F4 418.5 549.9 556.6 313.8 734.7 453.2 87 2.44 2 FALSE 4.43E-05 0.001432 0.63 -250 34051 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSEAELQR [K].dSEAELQR.[R] N-Term(TMT6plex) 5 E9Q1G8 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2 E9Q1G8; Q8C2A3; E9Q9F5; Q3UNN1; O55131 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin-7 OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=1 0 2 2 0.4494 0 1 1 1 588.80676 1176.60625 1176.6058 0.38 0.00023 0/0 0 0 4722311.5 HCD 30 MS2 32.15509 378 110 40.4246 9823 9823 9821 QEplus033719.raw F4 459.2 317.5 408.1 263 399.1 420.8 178 2.67 1 FALSE 3.35E-05 0.001276 0.64 -250 34064 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESNCYDPER [R].eSNcYDPER.[V] N-Term(TMT6plex); C4(Carbamidomethyl) 4 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 Q80U89; Q68FD5; Q5SXR6; Q3UPJ3 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1 0 2 2 0.7536 0 1 1 1 699.81195 1398.61662 1398.61571 0.65 0.00046 0/0 0 0 42672252 HCD 30 MS2 3.194043 402.5 48.564 40.4291 9825 9825 9821 QEplus033719.raw F4 374.6 399.6 483.8 354 432.4 370.5 18 2.8 1 FALSE 1.14E-05 0.0005579 0.713 -250 34073 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAQDRDQIYR [R].aAQDRDQIYR.[R] N-Term(TMT6plex) 2 F8WJG3 Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1 F8WJG3; P62996 Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1; Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1 1 3 3 0.4413 0 1 1 1 488.92969 1464.77451 1464.77566 -0.78 -0.00038 0/0 0 0 39628692 HCD 30 MS2 39.4979 649.5 34.975 40.4314 9826 9826 9821 QEplus033719.raw F4 565.2 627.5 756 562.2 650.1 735.7 304 3.49 1 FALSE 1.14E-05 8.46E-05 0.871 -250 34099 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLAHCEELR [K].rLAHcEELR.[A] N-Term(TMT6plex); C5(Carbamidomethyl) 1 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 1 4 4 0.6578 0 1 1 1 353.94632 1412.76345 1412.76298 0.33 0.00012 0/0 0 0 6361452.5 HCD 30 MS2 37.48497 211.4 110 40.4409 9830 9830 9821 QEplus033719.raw F4 233.1 147.6 208.8 151.6 299.3 227.7 239 2.63 1 FALSE 1.14E-05 0.000602 0.706 -250 34120 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESGEEFR [R].eSGEEFR.[M] N-Term(TMT6plex) 8 Q52KI7 Low density lipoprotein receptor-related protein associated protein 1 OS=Mus musculus OX=10090 GN=Lrpap1 PE=1 SV=1 Q52KI7; Q3TL96; Q6PEM5; Q8C252; Q5D0B0; A0A1S6GWI9; Q6ZY49; Q8K295 Low density lipoprotein receptor-related protein associated protein 1 OS=Mus musculus OX=10090 GN=Lrpap1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Lrpap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Lrpap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Low density lipoprotein receptor-associated protein 1 OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Lrpap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1 0 2 2 0.2811 0 1 1 1 541.76868 1082.53008 1082.53157 -1.38 -0.00075 0/0 0 0 7739186.5 HCD 30 MS2 0 485.9 110 40.4532 9834 9834 9832 QEplus033719.raw F4 474.9 401.2 518.1 440.2 549.6 531.3 73 2.49 1 FALSE 0.001744 0.02972 0.218 -250 34147 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLAEGTAQQR [R].qLAEGTAQQR.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.4861 0 1 1 1 665.87274 1330.73821 1330.72764 7.94 0.00528 0/0 0 0 9484117 HCD 30 MS2 12.94872 287.6 110 40.4625 9838 9838 9832 QEplus033719.raw F4 316.9 232 264.1 187.1 385.2 340.2 352 1.44 2 FALSE 1.14E-05 0.0005001 0.722 -250 34156 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLTPASGGSR [R].qLTPASGGSR.[S] N-Term(TMT6plex) 1 E0CYV9 Uncharacterized protein C4orf54 homolog OS=Mus musculus OX=10090 PE=1 SV=1 E0CYV9 Uncharacterized protein C4orf54 homolog OS=Mus musculus OX=10090 PE=1 SV=1 0 2 2 0.2824 0 1 1 1 601.83844 1202.6696 1202.66907 0.45 0.00027 0/0 0 0 7303542 HCD 30 MS2 37.2426 344.1 110 40.4675 9840 9840 9832 QEplus033719.raw F4 354.5 277.7 356 336.5 356.3 383.7 350 1.7 1 FALSE 0.005505 0.09315 0.025 -250 34162 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETSEDQPIR [K].eTSEDQPIR.[A] N-Term(TMT6plex) 2 Q99MD9 Nuclear autoantigenic sperm protein OS=Mus musculus OX=10090 GN=Nasp PE=1 SV=2 Q99MD9; B1AU75 Nuclear autoantigenic sperm protein OS=Mus musculus OX=10090 GN=Nasp PE=1 SV=2; Nuclear autoantigenic sperm protein OS=Mus musculus OX=10090 GN=Nasp PE=1 SV=1 0 2 2 0.5738 0 1 1 1 652.33887 1303.67046 1303.66913 1.02 0.00067 0/0 0 0 4982714 HCD 30 MS2 12.96328 227.9 110 40.47 9841 9841 9832 QEplus033719.raw F4 233.8 254.2 216.7 135.3 345.7 181.8 178 3.05 1 FALSE 1.14E-05 1.69E-05 1.004 -250 34166 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQEAQGLQEQR [K].sQEAQGLQEQR.[D] N-Term(TMT6plex) 7 A0A6I8MX07 Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=1 A0A6I8MX07; Q921M4; Z4YJU8; E9PUQ5; Q5DTL1; Q921M4-2; A0A6I8MWY5 Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=1; Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=3; Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=3; Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=2; MKIAA4150 protein (Fragment) OS=Mus musculus OX=10090 GN=Golga2 PE=2 SV=1; Isoform 2 of Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2; Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=1 0 2 2 0.6704 0 1 1 1 751.89136 1502.77544 1502.77605 -0.41 -0.00031 0/0 0 0 2502290 HCD 30 MS2 0 117.4 110 40.4725 9842 9842 9832 QEplus033719.raw F4 119.9 106.5 135.1 97.6 129.2 116 202 4.46 1 FALSE 1.14E-05 8.42E-11 2.011 -250 34170 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRPGPVAGHSQMPR [K].gRPGPVAGHSQMPR.[V] N-Term(TMT6plex) 6 Q3UPL0 Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2 S4R1Y8; Q3UPL0; Q3UPL0-2; Q05DS7; S4R2A9; S4R256 Protein transport protein Sec31A (Fragment) OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=1; Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2; Isoform 2 of Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a; Sec31a protein (Fragment) OS=Mus musculus OX=10090 GN=Sec31a PE=2 SV=1; Protein transport protein Sec31A (Fragment) OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=1; Protein transport protein Sec31A (Fragment) OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=1 0 4 4 0.6635 0 1 1 1 419.73386 1675.91359 1675.90121 7.39 0.0031 0/0 0 0 28026300 HCD 30 MS2 48.78008 378.7 38.259 40.4798 9844 9844 9843 QEplus033719.raw F4 349.2 327.4 433.7 356.5 366.7 438.9 406 4.16 1 FALSE 1.14E-05 6.29E-06 1.086 -250 34180 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRPAPYSRPK [R].nRPAPYSRPk.[Q] N-Term(TMT6plex); K10(TMT6plex) 1 O08583 THO complex subunit 4 OS=Mus musculus OX=10090 GN=Alyref PE=1 SV=3 O08583 THO complex subunit 4 OS=Mus musculus OX=10090 GN=Alyref PE=1 SV=3 0 4 4 0.53 0 1 1 1 411.74924 1643.97512 1643.97458 0.33 0.00013 0/0 0 0 19841766 HCD 30 MS2 39.03692 403.9 33.078 40.4866 9847 9847 9843 QEplus033719.raw F4 514.1 322.1 369.7 376.2 412.3 429.1 387 2.83 1 FALSE 1.14E-05 0.000426 0.736 -250 34203 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CVGNYDNR [R].cVGNYDNR.[G] N-Term(TMT6plex); C1(Carbamidomethyl) 2 P31324 cAMP-dependent protein kinase type II-beta regulatory subunit OS=Mus musculus OX=10090 GN=Prkar2b PE=1 SV=3 H3BK84; P31324 cAMP-dependent protein kinase type II-beta regulatory subunit OS=Mus musculus OX=10090 GN=Prkar2b PE=1 SV=1; cAMP-dependent protein kinase type II-beta regulatory subunit OS=Mus musculus OX=10090 GN=Prkar2b PE=1 SV=3 0 2 2 0.7523 0 1 1 1 613.79309 1226.57891 1226.57854 0.3 0.00018 0/0 0 0 4967205 HCD 30 MS2 10.46965 372.8 110 40.4938 9850 9850 9843 QEplus033719.raw F4 383.7 364.2 441.9 271.3 418 357.8 55 3.23 1 FALSE 1.14E-05 0.0001613 0.817 -250 34215 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSDDSWGR [R].sSDDSWGR.[G] N-Term(TMT6plex) 4 Q6ZQ33 MKIAA0857 protein (Fragment) OS=Mus musculus OX=10090 GN=Rab11fip5 PE=2 SV=1 Q3UM85; Q6ZQ33; A0A0N4SW73; Q8R361 FIP-RBD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rab11fip5 PE=2 SV=1; MKIAA0857 protein (Fragment) OS=Mus musculus OX=10090 GN=Rab11fip5 PE=2 SV=1; Rab11 family-interacting protein 5 OS=Mus musculus OX=10090 GN=Rab11fip5 PE=1 SV=1; Rab11 family-interacting protein 5 OS=Mus musculus OX=10090 GN=Rab11fip5 PE=1 SV=2 0 2 2 0.645 0 1 1 1 569.7688 1138.53032 1138.53263 -2.03 -0.00116 0/0 0 0 2698324.5 HCD 30 MS2 18.88422 412.2 110 40.4988 9852 9852 9843 QEplus033719.raw F4 410.7 337.8 428.7 374.7 457.5 463.8 30 2.31 1 FALSE 0.0008805 0.01223 0.37 -250 34253 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDGRPLPSSAQQR [R].eDGRPLPSSAQQR.[H] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 3 3 0.5836 0 1 1 1 557.29901 1669.88248 1669.88191 0.34 0.00019 0/0 0 0 25509292 HCD 30 MS2 22.73228 360.1 65.335 40.5156 9858 9858 9854 QEplus033719.raw F4 345.9 336.3 479.1 334.2 281 384.3 289 3.41 2 FALSE 1.14E-05 2.14E-07 1.365 -250 34289 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRPAPYSRPK [R].nRPAPYSRPk.[Q] N-Term(TMT6plex); K10(TMT6plex) 1 O08583 THO complex subunit 4 OS=Mus musculus OX=10090 GN=Alyref PE=1 SV=3 O08583 THO complex subunit 4 OS=Mus musculus OX=10090 GN=Alyref PE=1 SV=3 0 3 3 0.4601 0 1 1 1 548.66339 1643.97562 1643.97458 0.63 0.00035 0/0 0 0 6582902.5 HCD 30 MS2 57.77419 542.5 110 40.5404 9867 9867 9865 QEplus033719.raw F4 711.8 486.9 561.2 362.5 606.6 525.9 371 2.63 1 FALSE 0.001083 0.01403 0.345 -250 34297 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYGQSTYSR [K].tYGQSTYSR.[Q] N-Term(TMT6plex) 4 Q8BVQ9 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=1 SV=1 Q3UIH5; Q3U5V3; Q8BVQ9; P46471 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=1 SV=1; 26S proteasome regulatory subunit 7 OS=Mus musculus OX=10090 GN=Psmc2 PE=1 SV=5 0 2 2 0.6109 0 1 1 1 646.32886 1291.65044 1291.648 1.89 0.00122 0/0 0 0 48020280 HCD 30 MS2 30.04689 635.5 40.604 40.5427 9868 9868 9865 QEplus033719.raw F4 574.6 610.4 735 572.3 738 582.9 167 2.93 1 FALSE 1.14E-05 0.0004984 0.722 -250 34305 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGAAGDWGER [K].rGAAGDWGER.[A] N-Term(TMT6plex) 4 A0A286YDA2 Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1 A0A286YDA2; A0A286YDT3; A0A286YDV7; E9Q5C9 Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 (Fragment) OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1 1 3 3 0.6968 0 1 1 1 435.22806 1303.66962 1303.67046 -0.65 -0.00028 0/0 0 0 9097145 HCD 30 MS2 14.89673 380.2 110 40.5452 9869 9869 9865 QEplus033719.raw F4 396.3 338.8 434.8 284 426.2 401.4 173 4.75 1 FALSE 1.14E-05 3.54E-07 1.323 -250 34311 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTTDEGQQLR [R].dTTDEGQQLR.[K] N-Term(TMT6plex) 3 Q8CHW4 Translation initiation factor eIF-2B subunit epsilon OS=Mus musculus OX=10090 GN=Eif2b5 PE=1 SV=1 A0A338P6D9; Q8CHW4; F6T9C3 Translation initiation factor eIF-2B subunit epsilon (Fragment) OS=Mus musculus OX=10090 GN=Eif2b5 PE=1 SV=1; Translation initiation factor eIF-2B subunit epsilon OS=Mus musculus OX=10090 GN=Eif2b5 PE=1 SV=1; Translation initiation factor eIF-2B subunit epsilon (Fragment) OS=Mus musculus OX=10090 GN=Eif2b5 PE=1 SV=1 0 2 2 0.7247 0 1 1 1 696.35211 1391.69695 1391.6964 0.39 0.00027 0/0 0 0 5050481 HCD 30 MS2 0 186.4 110 40.5502 9871 9871 9865 QEplus033719.raw F4 195.2 152.2 207.8 160.6 162 240.8 142 3.56 1 FALSE 1.14E-05 1.55E-07 1.391 -250 34319 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSTSFGSQNR [R].tSTSFGSQNR.[G] N-Term(TMT6plex) 4 Q8CBY1 Protein Smaug homolog 1 OS=Mus musculus OX=10090 GN=Samd4a PE=1 SV=2 Q8CBY1-3; Q8CBY1; A0A2D0VMX2; A0A2I3BPM7 Isoform 3 of Protein Smaug homolog 1 OS=Mus musculus OX=10090 GN=Samd4a; Protein Smaug homolog 1 OS=Mus musculus OX=10090 GN=Samd4a PE=1 SV=2; Sterile alpha motif domain containing 4 transcript variant 5 OS=Mus musculus OX=10090 GN=Samd4 PE=2 SV=1; Sterile alpha motif domain-containing 4 OS=Mus musculus OX=10090 GN=Samd4 PE=1 SV=1 0 2 2 0.6941 0 1 1 1 657.33582 1313.66435 1313.66471 -0.27 -0.00018 0/0 0 0 4332725.5 HCD 30 MS2 12.47205 216.2 110 40.5527 9872 9872 9865 QEplus033719.raw F4 231.2 177.7 226.5 192.3 220.8 248.9 114 3.4 1 FALSE 1.14E-05 6.59E-07 1.272 -250 34325 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVAEPEGER [K].eVAEPEGER.[K] N-Term(TMT6plex) 3 Q3UID0 SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=1 Q6PDG5-2; Q3UID0; Q6PDG5 Isoform 2 of SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2; SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=1; SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=2 0 2 2 0.4413 0 1 1 1 622.81781 1244.62834 1244.63201 -2.95 -0.00183 0/0 0 0 2268630.25 HCD 30 MS2 27.57662 167.5 110 40.5552 9873 9873 9865 QEplus033719.raw F4 160.6 153.8 167.7 156.8 192 173.9 114 2.47 1 FALSE 0.001134 0.01502 0.332 -250 34329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGSQGQWGR [K].aGSQGQWGR.[A] N-Term(TMT6plex) 7 Q4FJX5 Dhcr7 protein OS=Mus musculus OX=10090 GN=Dhcr7 PE=2 SV=1 Q4FJX5; A0A140LIT2; Q3UIQ5; A0A140LI18; D3YXR4; D3Z7G1; O88455 Dhcr7 protein OS=Mus musculus OX=10090 GN=Dhcr7 PE=2 SV=1; 7-dehydrocholesterol reductase OS=Mus musculus OX=10090 GN=Dhcr7 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dhcr7 PE=2 SV=1; 7-dehydrocholesterol reductase (Fragment) OS=Mus musculus OX=10090 GN=Dhcr7 PE=1 SV=1; 7-dehydrocholesterol reductase (Fragment) OS=Mus musculus OX=10090 GN=Dhcr7 PE=1 SV=1; 7-dehydrocholesterol reductase (Fragment) OS=Mus musculus OX=10090 GN=Dhcr7 PE=1 SV=1; 7-dehydrocholesterol reductase OS=Mus musculus OX=10090 GN=Dhcr7 PE=1 SV=1 0 2 2 0.5088 0 1 1 1 588.30768 1175.60808 1175.61189 -3.24 -0.0019 0/0 0 0 2159752.25 HCD 30 MS2 0 377.6 110 40.5577 9874 9874 9865 QEplus033719.raw F4 392.3 321.1 436.1 303.6 376.2 436.4 170 2.28 1 FALSE 1.14E-05 0.0004444 0.732 -250 34375 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDGRPLPSSAQQR [R].eDGRPLPSSAQQR.[H] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.4428 0 1 1 1 835.44574 1669.8842 1669.88191 1.37 0.00115 0/0 0 0 3304419.5 HCD 30 MS2 14.65466 42 110 40.5798 9882 9882 9876 QEplus033719.raw F4 38.7 37.3 59.7 39.4 31.5 45.4 294 2.71 2 FALSE 1.14E-05 4.32E-06 1.117 -250 34414 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQQVEAAER [K].aQQVEAAER.[S] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.4098 0 1 1 1 615.83606 1230.66484 1230.66398 0.7 0.00043 0/0 0 0 12880184 HCD 30 MS2 0 605.9 110 40.6068 9891 9891 9888 QEplus033719.raw F4 629.3 561.4 627.9 505.8 667.9 642.8 284 3.27 2 FALSE 1.14E-05 9.19E-07 1.244 -250 34421 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YDDYSSSR [R].yDDYSSSR.[D] N-Term(TMT6plex) 4 Q9WV02; Q91VM5 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1;RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" A0A2I3BRL8; Q9WV02; Q91VM5; S4R1F6 "Predicted gene 7324 OS=Mus musculus OX=10090 GN=Gm7324 PE=4 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1" 0 2 2 0.7036 0 1 1 1 611.28418 1221.56108 1221.55851 2.1 0.00129 0/0 0 0 11348420 HCD 30 MS2 37.75207 557.3 110 40.6093 9892 9892 9888 QEplus033719.raw F4 784.8 483.5 515.3 566 569.6 424.9 22 3.07 2 FALSE 5.44E-05 0.002027 0.597 -250 34430 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHVETLR [R].aHVETLR.[Q] N-Term(TMT6plex) 1 P15497 SWISS-PROT:P15497 (Bos taurus) Apolipoprotein A-I precursor P15497 SWISS-PROT:P15497 (Bos taurus) Apolipoprotein A-I precursor 0 3 3 0.4428 0 1 1 1 352.21149 1054.61991 1054.62066 -0.71 -0.00025 0/0 0 0 9895179 HCD 30 MS2 28.66543 304.6 90.256 40.6115 9893 9893 9888 QEplus033719.raw F4 388.5 201.6 235.2 163.4 614.9 223.8 112 3.41 1 TRUE 1.14E-05 0.0003919 0.743 -250 34439 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SFDQADR [R].sFDQADR.[A] N-Term(TMT6plex) 5 Q4JG03 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1 Q4JG03; Q7TMY8-3; Q9CU76; Q7TMY8; A2AFQ0 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; Isoform 3 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=5; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=1 0 2 2 0.3011 0 1 1 1 534.26886 1067.53044 1067.5319 -1.37 -0.00073 0/0 0 0 6486502 HCD 30 MS2 27.799 699.6 110 40.614 9894 9894 9888 QEplus033719.raw F4 795.7 556.4 688.7 656.2 731.2 769.2 92 2.69 1 FALSE 0.0002814 0.005663 0.486 -250 34447 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPSTENQEAK [R].gPSTENQEAk.[R] N-Term(TMT6plex); K10(TMT6plex) 3 Q6DFZ1 Golgi-specific brefeldin A-resistance factor 1 OS=Mus musculus OX=10090 GN=Gbf1 PE=1 SV=1 Q6DFZ1; Q6PB54; Q6A099 Golgi-specific brefeldin A-resistance factor 1 OS=Mus musculus OX=10090 GN=Gbf1 PE=1 SV=1; Gbf1 protein OS=Mus musculus OX=10090 GN=Gbf1 PE=2 SV=1; MKIAA0248 protein (Fragment) OS=Mus musculus OX=10090 GN=Gbf1 PE=1 SV=1 0 2 2 0.5578 0 1 1 1 759.9129 1518.81853 1518.81641 1.4 0.00106 0/0 0 0 1997872.75 HCD 30 MS2 0 126.9 110 40.6166 9895 9895 9888 QEplus033719.raw F4 163.7 103.5 132.6 103.4 129.1 128.8 341 2.94 1 FALSE 1.14E-05 1.42E-08 1.588 -250 34485 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATPEERPK [K].aTPEERPk.[L] N-Term(TMT6plex); K8(TMT6plex) 6 Q790Y8 Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pdx PE=1 SV=1 A3KG36; A0FF38; P97324; Q790Y8; Q3TNL1; G3UWD6 Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=G6pdx PE=1 SV=1; Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pd2 PE=3 SV=1; Glucose-6-phosphate 1-dehydrogenase 2 OS=Mus musculus OX=10090 GN=G6pd2 PE=1 SV=3; Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pdx PE=1 SV=1; Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pdx PE=2 SV=1; Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pd2 PE=1 SV=1 0 3 3 0.4771 0 1 1 1 462.61011 1385.81577 1385.81529 0.35 0.00016 0/0 0 0 46521600 HCD 30 MS2 39.61038 679.2 21.277 40.6359 9902 9902 9899 QEplus033719.raw F4 684.5 615.4 722.6 579.7 895 577.8 330 2.18 1 FALSE 0.001491 0.02155 0.268 -250 34490 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSSPER [K].lSSPER.[E] N-Term(TMT6plex) 4 O89079 Coatomer subunit epsilon OS=Mus musculus OX=10090 GN=Cope PE=1 SV=3 O89079; E9Q6I5; D3Z315; Q9D1J2 Coatomer subunit epsilon OS=Mus musculus OX=10090 GN=Cope PE=1 SV=3; Coatomer subunit epsilon OS=Mus musculus OX=10090 GN=Cope PE=1 SV=1; Coatomer subunit epsilon (Fragment) OS=Mus musculus OX=10090 GN=Cope PE=1 SV=1; Coatomer subunit epsilon OS=Mus musculus OX=10090 GN=Cope PE=2 SV=1 0 2 2 0.0558 0 1 1 1 459.26544 917.52361 917.52536 -1.91 -0.00088 0/0 0 0 34728028 HCD 30 MS2 36.23768 557.9 22.273 40.6381 9903 9903 9899 QEplus033719.raw F4 531 392.4 560.2 625.5 520.4 717.6 180 1.97 1 FALSE 0.004873 0.08516 0.048 -250 34531 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASAAQLR [K].aSAAQLR.[I] N-Term(TMT6plex) 1 P61082 NEDD8-conjugating enzyme Ubc12 OS=Mus musculus OX=10090 GN=Ube2m PE=1 SV=1 P61082 NEDD8-conjugating enzyme Ubc12 OS=Mus musculus OX=10090 GN=Ube2m PE=1 SV=1 0 2 2 0.1202 0 1 1 1 473.28799 945.56871 945.5679 0.86 0.00041 0/0 0 0 45820912 HCD 30 MS2 32.40681 641.1 23.043 40.66 9911 9911 9910 QEplus033719.raw F4 635 512.1 665.1 631 716.2 687.3 86 2.08 1 FALSE 0.003624 0.06957 0.089 -250 34554 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CREVAENCK [K].cREVAENck.[D] N-Term(TMT6plex); C1(Carbamidomethyl); C8(Carbamidomethyl); K9(TMT6plex) 3 A0A1L1STE6 "Isocitrate dehydrogenase [NAD] subunit, mitochondrial OS=Mus musculus OX=10090 GN=Idh3a PE=1 SV=1" A0A1L1STE6; Q9D6R2-2; Q9D6R2 "Isocitrate dehydrogenase [NAD] subunit, mitochondrial OS=Mus musculus OX=10090 GN=Idh3a PE=1 SV=1; Isoform 2 of Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Idh3a; Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Idh3a PE=1 SV=1" 1 3 3 0.6598 0 1 1 1 541.95007 1623.83567 1623.83472 0.58 0.00032 0/0 0 0 30825516 HCD 30 MS2 7.75909 842.1 74.776 40.667 9914 9914 9910 QEplus033719.raw F4 1009.7 525.4 774.4 1139.9 733.4 869.6 267 3.88 1 FALSE 1.14E-05 1.40E-07 1.4 -250 34561 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREMEEQMR [R].qREMEEQMR.[R] N-Term(TMT6plex) 3 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q810V5; Q8VIJ6; Q7TMH7 "Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1; Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1" 1 3 3 0.6424 0 1 1 1 489.24167 1465.71045 1465.7089 1.06 0.00052 0/0 0 0 30269940 HCD 30 MS2 54.08173 591.6 39.635 40.6692 9915 9915 9910 QEplus033719.raw F4 520.6 638.4 694.8 409.6 713.2 573.2 103 4.25 1 FALSE 1.14E-05 2.50E-05 0.972 -250 34573 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQELSPR [K].dQELSPR.[E] N-Term(TMT6plex) 2 A2AP31 Complex I-B17 OS=Mus musculus OX=10090 GN=Ndufb6 PE=1 SV=1 A2AP31; A2AP32 Complex I-B17 OS=Mus musculus OX=10090 GN=Ndufb6 PE=1 SV=1; Complex I-B17 OS=Mus musculus OX=10090 GN=Ndufb6 PE=1 SV=1 0 2 2 0.5437 0 1 1 1 537.29321 1073.57915 1073.57885 0.28 0.00015 0/0 0 0 11713883 HCD 30 MS2 48.47832 740.4 110 40.674 9917 9917 9910 QEplus033719.raw F4 779.8 513.7 754.5 720.7 870.7 803.1 164 2.52 1 FALSE 0.0007436 0.01058 0.395 -250 34579 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSDFTDR [R].sSDFTDR.[M] N-Term(TMT6plex) 2 Q02013 Aquaporin-1 OS=Mus musculus OX=10090 GN=Aqp1 PE=1 SV=3 Q02013; Q3TLW5 Aquaporin-1 OS=Mus musculus OX=10090 GN=Aqp1 PE=1 SV=3; Aquaporin-1 OS=Mus musculus OX=10090 GN=Aqp1 PE=2 SV=1 0 2 2 0.2257 0 1 1 1 528.7619 1056.51653 1056.51592 0.58 0.0003 0/0 0 0 11204529 HCD 30 MS2 18.02168 645.7 110 40.6765 9918 9918 9910 QEplus033719.raw F4 520.8 837.4 661.7 339.2 959.5 555.5 30 2.57 1 FALSE 0.005667 0.09532 0.019 -250 34592 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GKGEQIAR [K].gkGEQIAR.[E] N-Term(TMT6plex); K2(TMT6plex) 2 Q4FJL0 Rab10 OS=Mus musculus OX=10090 GN=Rab10 PE=1 SV=1 Q4FJL0; Q3U621 Rab10 OS=Mus musculus OX=10090 GN=Rab10 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab10 PE=2 SV=1 1 3 3 0.1205 0 1 1 1 439.60846 1316.81083 1316.80505 4.38 0.00192 0/0 0 0 5119599 HCD 30 MS2 72.93254 893.2 110 40.6815 9920 9920 9910 QEplus033719.raw F4 1004.6 669.7 973.6 954.5 882.2 874.4 466 1.66 1 FALSE 0.008243 0.1414 -0.076 -250 34600 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPVTVHSR [R].kPVTVHSR.[A] N-Term(TMT6plex); K1(TMT6plex) 2 Q5I0T8 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 Q5I0T8; A2A547 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1; Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 0 2 2 0.4874 0 1 1 1 691.43835 1381.86943 1381.86799 1.04 0.00072 0/0 0 0 5311518.5 HCD 30 MS2 14.48651 211.8 110 40.6888 9922 9922 9921 QEplus033719.raw F4 309.2 144 195.1 230.7 214.6 177 186 1.99 1 FALSE 0.002869 0.05623 0.124 -250 34615 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPVTVHSR [R].kPVTVHSR.[A] N-Term(TMT6plex); K1(TMT6plex) 2 Q5I0T8 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 Q5I0T8; A2A547 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1; Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 0 3 3 0.6197 0 1 1 1 461.29446 1381.86884 1381.86799 0.61 0.00028 0/0 0 0 51962016 HCD 30 MS2 7.590756 670.6 32.88 40.6936 9924 9924 9921 QEplus033719.raw F4 1070.2 430.8 643.7 772.1 547.7 558.9 183 3.55 1 FALSE 1.14E-05 2.88E-05 0.96 -250 34643 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVPTDEAR [R].aVPTDEAR.[A] N-Term(TMT6plex) 12 Q78ZJ8 RAB11B protein OS=Mus musculus OX=10090 GN=Rab11b PE=1 SV=1 Q78ZJ8; E9Q3P9; G3UY29; Q0PD45; A0A068BFR3; F6R2Z5; Q3UZ37; G3UZD3; G3UZL4; E9PZB2; F8WGS1; P97345 RAB11B protein OS=Mus musculus OX=10090 GN=Rab11b PE=1 SV=1; Ras-related protein Rab-11A OS=Mus musculus OX=10090 GN=Rab11a PE=4 SV=1; Ras-related protein Rab-11B OS=Mus musculus OX=10090 GN=Rab11b PE=4 SV=1; Rab11A OS=Mus musculus OX=10090 GN=Rab11a PE=1 SV=1; RAS oncogene family protein OS=Mus musculus OX=10090 GN=Rab11b PE=2 SV=1; Ras-related protein Rab-11A (Fragment) OS=Mus musculus OX=10090 GN=Rab11a PE=4 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab11b PE=2 SV=1; Ras-related protein Rab-11B OS=Mus musculus OX=10090 GN=Rab11b PE=1 SV=1; Ras-related protein Rab-11B (Fragment) OS=Mus musculus OX=10090 GN=Rab11b PE=1 SV=1; Ras-related protein Rab-11A (Fragment) OS=Mus musculus OX=10090 GN=Rab11a PE=1 SV=1; Ras-related protein Rab-11A (Fragment) OS=Mus musculus OX=10090 GN=Rab11a PE=4 SV=1; Rab 11 (Fragment) OS=Mus musculus OX=10090 GN=Rab11a PE=2 SV=1 0 2 2 0.4565 0 1 1 1 544.30127 1087.59526 1087.5945 0.7 0.00038 0/0 0 0 11607288 HCD 30 MS2 47.73513 1049.4 110 40.7006 9927 9927 9921 QEplus033719.raw F4 1262.4 778.1 1085.4 936 1151.1 1083.5 201 3.33 1 FALSE 0.00079 0.01088 0.39 -250 34648 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREMEEQMR [R].qREMEEQMR.[R] N-Term(TMT6plex) 3 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q810V5; Q8VIJ6; Q7TMH7 "Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1; Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1" 1 2 2 0.6628 0 1 1 1 733.35907 1465.71086 1465.7089 1.34 0.00098 0/0 0 0 4225836 HCD 30 MS2 0 182.9 110 40.7031 9928 9928 9921 QEplus033719.raw F4 188.8 185.5 205.2 129.6 228.3 159.9 104 3.47 1 FALSE 0.001125 0.01489 0.334 -250 34675 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQEEMMR [R].qQEEMMR.[R] N-Term(TMT6plex) 6 Q3TMM5; Q3UM20 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1 Q3TMM5; Q3TTV7; Q3TFC2; Q3UM20; Q3TF40; Q99K48 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Non-POU domain-containing octamer-binding protein OS=Mus musculus OX=10090 GN=Nono PE=1 SV=3 0 2 2 0.3764 0 1 1 1 590.78693 1180.56658 1180.56519 1.17 0.00069 0/0 0 0 21821186 HCD 30 MS2 12.40516 846.9 110 40.7202 9934 9934 9932 QEplus033719.raw F4 870.2 820.6 914.3 592.9 1036.7 846.7 62 2.63 2 FALSE 0.001988 0.03496 0.194 -250 34683 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDQRFPR [K].eDQRFPR.[S] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 1 3 3 0.3425 0 1 1 1 392.88248 1176.63288 1176.63229 0.5 0.0002 0/0 0 0 35435496 HCD 30 MS2 19.45972 449.7 36.818 40.7224 9935 9935 9932 QEplus033719.raw F4 592.4 206.2 501.4 432.4 348 617.9 298 2.54 1 FALSE 0.0003496 0.006714 0.464 -250 34703 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LHQNICR [K].lHQNIcR.[K] N-Term(TMT6plex); C6(Carbamidomethyl) 9 Q3TG12 Phenylalanyl-tRNA synthetase beta subunit (Fragment) OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1 A0A087WS80; Q9CZU5; Q3TI98; Q3TMX6; Q3UYC2; Q8C644; Q3TG12; A0A087WPV4; Q9WUA2 Phenylalanine--tRNA ligase beta subunit (Fragment) OS=Mus musculus OX=10090 GN=Farsb PE=1 SV=1; Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit (Fragment) OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanine--tRNA ligase beta subunit (Fragment) OS=Mus musculus OX=10090 GN=Farsb PE=1 SV=1; Phenylalanine--tRNA ligase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=1 SV=2 0 3 3 0.4901 0 1 1 1 390.55191 1169.64118 1169.64108 0.09 0.00003 0/0 0 0 13496797 HCD 30 MS2 63.66258 378.4 63.997 40.7292 9938 9938 9932 QEplus033719.raw F4 415.4 297.6 412.4 315.9 388.2 441.1 204 3.04 1 FALSE 5.44E-05 0.001811 0.608 -250 34713 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVEAVR [K].eVEAVR.[N] N-Term(TMT6plex) 4 E9Q6R7 Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 O08614; A0A1W2P7C0; Q61636; E9Q6R7 Cytoskeletal protein OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1; G-utrophin (Predicted protein) OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1; Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 0 2 2 0.1852 0 1 1 1 466.27289 931.5385 931.54101 -2.7 -0.00126 0/0 0 0 13409518 HCD 30 MS2 34.5032 840 86.827 40.7315 9939 9939 9932 QEplus033719.raw F4 885.4 643 855.6 814.4 928.1 913.7 191 2.16 1 FALSE 0.003261 0.06358 0.104 -250 34719 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLDTSEEGGR [K].sLDTSEEGGR.[K] N-Term(TMT6plex) 3 E9PWG6 "Non-SMC condensin I complex, subunit G OS=Mus musculus OX=10090 GN=Ncapg PE=1 SV=1" Q9JK28; E9PWG6; B2RQA7 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ncapg PE=2 SV=1; Non-SMC condensin I complex, subunit G OS=Mus musculus OX=10090 GN=Ncapg PE=1 SV=1; Ncapg protein OS=Mus musculus OX=10090 GN=Ncapg PE=2 SV=1" 0 2 2 0.7241 0 1 1 1 640.32037 1279.63347 1279.63274 0.57 0.00037 0/0 0 0 5775561.5 HCD 30 MS2 15.08067 311.9 110 40.734 9940 9940 9932 QEplus033719.raw F4 293.5 360.1 281.3 167 536.5 233.2 117 2.9 1 FALSE 1.14E-05 1.25E-07 1.409 -250 34732 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GKGEQIAR [K].gkGEQIAR.[E] N-Term(TMT6plex); K2(TMT6plex) 2 Q4FJL0 Rab10 OS=Mus musculus OX=10090 GN=Rab10 PE=1 SV=1 Q4FJL0; Q3U621 Rab10 OS=Mus musculus OX=10090 GN=Rab10 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab10 PE=2 SV=1 1 2 2 0.1322 0 1 1 1 658.9068 1316.80632 1316.80505 0.96 0.00063 0/0 0 0 5305594 HCD 30 MS2 18.86526 228.9 110 40.7463 9944 9944 9943 QEplus033719.raw F4 284.5 167.1 233.6 262.9 212.3 213 600 1.74 1 FALSE 0.003515 0.06776 0.093 -250 34738 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STSSTPGMGSPSR [R].sTSSTPGMGSPSR.[D] N-Term(TMT6plex) 5 Q8C8U0 Liprin-beta-1 OS=Mus musculus OX=10090 GN=Ppfibp1 PE=1 SV=3 Q8C8U0-2; F6S1C4; Q8C8U0; Q3U417; Q8C8U0-3 Isoform 2 of Liprin-beta-1 OS=Mus musculus OX=10090 GN=Ppfibp1; Liprin-beta-1 (Fragment) OS=Mus musculus OX=10090 GN=Ppfibp1 PE=1 SV=1; Liprin-beta-1 OS=Mus musculus OX=10090 GN=Ppfibp1 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppfibp1 PE=2 SV=1; Isoform 3 of Liprin-beta-1 OS=Mus musculus OX=10090 GN=Ppfibp1 0 2 2 0.6456 0 1 1 1 740.86646 1480.72563 1480.72632 -0.47 -0.00034 0/0 0 0 5818426 HCD 30 MS2 0 210.1 110 40.7488 9945 9945 9943 QEplus033719.raw F4 225.9 198.7 236.4 156.1 278.2 165.1 134 4.43 1 FALSE 1.14E-05 4.51E-09 1.683 -250 34765 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGCPPGNPTAGR [K].aGcPPGNPTAGR.[N] N-Term(TMT6plex); C3(Carbamidomethyl) 4 Q4FJZ4 T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1 Q4FJZ4; Q3UDG2; Q3U6U7; P32921 "T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; Tryptophan--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Wars1 PE=1 SV=2" 0 2 2 0.7375 0 1 1 1 692.35278 1383.69829 1383.70005 -1.27 -0.00088 0/0 0 0 5620165 HCD 30 MS2 31.37856 234.3 110 40.7608 9950 9950 9943 QEplus033719.raw F4 263.6 171.9 258.7 234.8 230 246.8 148 3.2 1 FALSE 1.14E-05 5.84E-06 1.092 -250 34777 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCEDMDECSIR [K].ncEDmDEcSIR.[N] N-Term(TMT6plex); C2(Carbamidomethyl); M5(Oxidation); C8(Carbamidomethyl) 3 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q60784 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Fibrillin-1 (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1 0 2 2 0.8522 0 1 1 1 837.34381 1673.68035 1673.67667 2.19 0.00184 0/0 0 0 3561627.5 HCD 30 MS2 0 96.8 110 40.7659 9952 9952 9943 QEplus033719.raw F4 106.7 52.9 109.3 139.2 57.9 115.1 4 2.91 1 FALSE 0.0001603 0.003701 0.536 -250 34800 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRPQATAEQIR [K].qRPQATAEQIR.[L] N-Term(TMT6plex) 14 Q80X50 Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1 A0A0G2JDV6; Q80X50-4; Q80X50-3; A0A0G2JDT1; A0A0G2JGD0; Q80X50-5; A0A0H2UH17; Q8BJ53; Q80X50-2; Q80X50; A0A0G2JG47; A0A0G2JE24; Q812D5; Q812D4 Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Isoform 4 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Isoform 3 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Ubiquitin-associated protein 2-like (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Ubiquitin-associated protein 2-like (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Isoform 5 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; UBA domain-containing protein OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1; Isoform 2 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Ubiquitin-associated protein 2-like (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Ubiquitin-associated protein 2-like (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Lingerer protein-2a OS=Mus musculus OX=10090 GN=lig-2a PE=2 SV=1; Lingerer protein-2b OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1 0 3 3 0.6407 0 1 1 1 509.62543 1526.86173 1526.86005 1.1 0.00056 0/0 0 0 24005454 HCD 30 MS2 19.12482 778.4 97.606 40.7871 9960 9960 9954 QEplus033719.raw F4 848.6 634.1 796.7 532.3 1010.1 848.9 393 5.01 1 FALSE 1.14E-05 2.19E-08 1.552 -250 34817 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AATVVAR [R].aATVVAR.[G] N-Term(TMT6plex) 9 Q3TYK4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1 Q8C3Z4; Q3TYK4; P12849; D3Z0V6; Q9CS50; Q3UBA7; Q3TY04; Q9DBC7; Q921L9 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1; cAMP-dependent protein kinase type I-beta regulatory subunit OS=Mus musculus OX=10090 GN=Prkar1b PE=1 SV=2; cAMP-dependent protein kinase type I-beta regulatory subunit OS=Mus musculus OX=10090 GN=Prkar1b PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1b PE=2 SV=1; cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Mus musculus OX=10090 GN=Prkar1a PE=1 SV=3; Protein kinase, cAMP dependent regulatory, type I beta OS=Mus musculus OX=10090 GN=Prkar1b PE=2 SV=1" 0 2 2 0.2153 0 1 1 1 458.79272 916.57817 916.57773 0.48 0.00022 0/0 0 0 21133644 HCD 30 MS2 71.32899 762.4 23.983 40.7917 9962 9962 9954 QEplus033719.raw F4 761.5 578.8 851.8 711.8 826.7 843.6 85 2.09 1 FALSE 0.001667 0.02752 0.229 -250 34827 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVGNRDQMAAAR [K].dVGNRDQMAAAR.[G] N-Term(TMT6plex) 4 Q545R0 "Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1" A0A494BAD0; Q6NV50; Q3TGQ3; Q545R0 "Catenin alpha-1 (Fragment) OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1; Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctnna1 PE=2 SV=1; Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1" 1 3 3 0.5612 0 1 1 1 511.59885 1532.78199 1532.78009 1.24 0.00063 0/0 0 0 17033420 HCD 30 MS2 42.69614 653.6 65.995 40.7939 9963 9963 9954 QEplus033719.raw F4 684.9 503.5 726.3 511.9 687.9 807.2 221 3.92 1 FALSE 1.14E-05 5.22E-08 1.481 -250 34835 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TKPTQNSVR [K].tkPTQNSVR.[AE] N-Term(TMT6plex); K2(TMT6plex) 5 P70303; P70698 CTP synthase 2 OS=Mus musculus OX=10090 GN=Ctps2 PE=1 SV=1;CTP synthase 1 OS=Mus musculus OX=10090 GN=Ctps1 PE=1 SV=2 P70303; P70303-3; Q3TPP2; P70303-2; P70698 CTP synthase 2 OS=Mus musculus OX=10090 GN=Ctps2 PE=1 SV=1; Isoform 3 of CTP synthase 2 OS=Mus musculus OX=10090 GN=Ctps2; CTP_synth_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ctps PE=2 SV=1; Isoform 2 of CTP synthase 2 OS=Mus musculus OX=10090 GN=Ctps2; CTP synthase 1 OS=Mus musculus OX=10090 GN=Ctps1 PE=1 SV=2 0 3 3 0.335 0 1 1 1 496.96832 1488.89042 1488.88985 0.38 0.00019 0/0 0 0 7407805 HCD 30 MS2 58.95234 1125.4 110 40.7964 9964 9964 9954 QEplus033719.raw F4 1306.8 915.3 1159.9 963.4 1350.8 1055.9 577 2.06 2 FALSE 0.007009 0.1111 -0.022 -250 34853 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEASNFR [R].eEASNFR.[S] N-Term(TMT6plex) 4 Q9DCD8 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1 Q3TEL1; Q9DCD8; O70435; E0CX62 Uncharacterized protein OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1; Proteasome subunit alpha type-3 OS=Mus musculus OX=10090 GN=Psma3 PE=1 SV=3; Proteasome subunit alpha type-3 OS=Mus musculus OX=10090 GN=Psma3 PE=1 SV=2 0 2 2 0.4677 0 1 1 1 541.27814 1081.549 1081.54755 1.34 0.00072 0/0 0 0 106495136 HCD 30 MS2 2.212769 640 14.063 40.8085 9968 9968 9965 QEplus033719.raw F4 695.7 529.8 667.6 552.1 703.4 691.6 103 2.48 1 FALSE 0.002836 0.05563 0.126 -250 34867 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARNDESQLSPATR [R].aRNDESQLSPATR.[G] N-Term(TMT6plex) 31 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q499F9; Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q05CR3; Q9QXS1-9; E9Q9J6; Q9QXS1-5; E9PW24; A0A0R4J221; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; A0A0R4J223; Q8C8S5; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.7355 0 1 1 1 558.63104 1673.87857 1673.87683 1.04 0.00058 0/0 0 0 72939376 HCD 30 MS2 8.371197 287.2 27.299 40.813 9970 9970 9965 QEplus033719.raw F4 299 258.2 323.1 241.8 297.1 303.9 272 6.05 2 FALSE 1.14E-05 1.05E-13 2.563 -250 34880 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KRPVIVHR [K].kRPVIVHR.[A] N-Term(TMT6plex); K1(TMT6plex) 3 Q9D0R2 "Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2" Q3U630; Q9D0R2; Q99KJ4 "Threonyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1; Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2; Threonyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1" 1 4 4 0.7712 0 1 1 1 366.49911 1462.97463 1462.97346 0.8 0.00029 0/0 0 0 40503752 HCD 30 MS2 27.31727 345.9 28.53 40.8175 9972 9972 9965 QEplus033719.raw F4 349.3 285.1 439 293.2 242.9 466 46 3.54 1 FALSE 0.001584 0.02419 0.25 -250 34893 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNRPSEGPLQTR [K].nNRPSEGPLQTR.[L] N-Term(TMT6plex) 3 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 Q80U89; Q68FD5; Q5SXR6 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1 0 3 3 0.6851 0 1 1 1 533.29401 1597.86747 1597.86078 4.18 0.00223 0/0 0 0 14898849 HCD 30 MS2 24.71783 576 83.522 40.822 9974 9974 9965 QEplus033719.raw F4 559.5 491.2 673.2 533.1 571.2 627.9 359 3.97 1 FALSE 1.14E-05 8.59E-09 1.63 -250 34900 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRAEVLQSTQR [K].qRAEVLQSTQR.[F] N-Term(TMT6plex) 5 A0A0A0MQ79 Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1 A0A0A0MQ79; S4R2L9; S4R2J9; Q3TLH4; Q3TLH4-5 Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C (Fragment) OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=3; Isoform 5 of Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c 1 3 3 0.6455 0 1 1 1 515.62964 1544.87436 1544.87062 2.42 0.00125 0/0 0 0 9417312 HCD 30 MS2 42.69414 516.1 110 40.8245 9975 9975 9965 QEplus033719.raw F4 588.6 388.5 578.4 415.6 552 573.4 381 4.26 1 FALSE 1.14E-05 3.80E-09 1.697 -250 34907 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAQEVQR [R].vAQEVQR.[F] N-Term(TMT6plex) 2 Q922L6 Negative elongation factor D OS=Mus musculus OX=10090 GN=Nelfcd PE=1 SV=2 Q922L6; Q3TW27 Negative elongation factor D OS=Mus musculus OX=10090 GN=Nelfcd PE=1 SV=2; Negative elongation factor D OS=Mus musculus OX=10090 GN=Nelfcd PE=1 SV=1 0 2 2 0.2332 0 1 1 1 529.81427 1058.62126 1058.61557 5.37 0.00284 0/0 0 0 5001773.5 HCD 30 MS2 73.43882 818.2 110 40.8318 9977 9977 9976 QEplus033719.raw F4 1155 583 694.6 574.7 1177.8 724.2 323 2.23 1 FALSE 0.0004392 0.007521 0.448 -250 34916 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTDSEEEIR [K].dTDSEEEIR.[E] N-Term(TMT6plex) 5 P0DP27 Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1 A0A1Y7VK66; A0A3Q4EHJ0; P0DP27; Q9D6P8; Q3UKW2 Calmodulin-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Calml3 PE=1 SV=1; Calmodulin-1 OS=Mus musculus OX=10090 GN=Calm1 PE=1 SV=1; Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1; Calmodulin-like protein 3 OS=Mus musculus OX=10090 GN=Calml3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=1 SV=1 0 2 2 0.651 0 1 1 1 661.81818 1322.62908 1322.62732 1.33 0.00088 0/0 0 0 12912767 HCD 30 MS2 9.770331 448.4 110 40.8343 9978 9978 9976 QEplus033719.raw F4 462.4 373.2 476.9 367.8 540 470.3 61 3.41 1 FALSE 1.14E-05 3.55E-06 1.133 -250 34930 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTKPQAQPER [K].tTkPQAQPER.[R] N-Term(TMT6plex); K3(TMT6plex) 9 P22315 "Ferrochelatase, mitochondrial OS=Mus musculus OX=10090 GN=Fech PE=1 SV=2" A0A494BA61; A0A494B9Y8; Q3UC49; P22315; A0A494BBL4; A0A494BAI5; Q91W09; Q544X6; Q8C3V7 "Ferrochelatase, mitochondrial OS=Mus musculus OX=10090 GN=Fech PE=1 SV=1; Ferrochelatase OS=Mus musculus OX=10090 GN=Fech PE=1 SV=1; Ferrochelatase OS=Mus musculus OX=10090 GN=Fech PE=2 SV=1; Ferrochelatase, mitochondrial OS=Mus musculus OX=10090 GN=Fech PE=1 SV=2; Ferrochelatase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Fech PE=1 SV=1; Ferrochelatase OS=Mus musculus OX=10090 GN=Fech PE=1 SV=1; Ferrochelatase OS=Mus musculus OX=10090 GN=Fech PE=1 SV=1; Ferrochelatase OS=Mus musculus OX=10090 GN=Fech PE=1 SV=1; Ferrochelatase OS=Mus musculus OX=10090 GN=Fech PE=2 SV=1" 0 3 3 0.5459 0 1 1 1 538.65161 1613.94028 1613.93753 1.71 0.00092 0/0 0 0 43836716 HCD 30 MS2 42.66418 1108.9 44.736 40.8434 9982 9982 9976 QEplus033719.raw F4 1139.4 813.5 1037.1 1318.9 1056 1288.4 358 2.29 1 FALSE 0.002249 0.04371 0.162 -250 34947 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARNDESQLSPATR [R].aRNDESQLSPATR.[G] N-Term(TMT6plex) 31 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q499F9; Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q05CR3; Q9QXS1-9; E9Q9J6; Q9QXS1-5; E9PW24; A0A0R4J221; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; A0A0R4J223; Q8C8S5; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.7214 0 1 1 1 837.44366 1673.88005 1673.87683 1.93 0.00161 0/0 0 0 7206794 HCD 30 MS2 10.0896 73 110 40.8507 9985 9985 9976 QEplus033719.raw F4 79.5 57.3 74 84.2 59.2 83.7 291 4.2 2 FALSE 1.14E-05 4.22E-07 1.309 -250 34952 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYSVGASGSSSR [K].sYSVGASGSSSR.[K] N-Term(TMT6plex) 3 Q8BTV2 Cleavage and polyadenylation specificity factor subunit 7 OS=Mus musculus OX=10090 GN=Cpsf7 PE=1 SV=2 Q8BTV2-2; Q8BTV2-3; Q8BTV2 Isoform 2 of Cleavage and polyadenylation specificity factor subunit 7 OS=Mus musculus OX=10090 GN=Cpsf7; Isoform 3 of Cleavage and polyadenylation specificity factor subunit 7 OS=Mus musculus OX=10090 GN=Cpsf7; Cleavage and polyadenylation specificity factor subunit 7 OS=Mus musculus OX=10090 GN=Cpsf7 PE=1 SV=2 0 2 2 0.7599 0 1 1 1 687.34729 1373.6873 1373.68584 1.07 0.00073 0/0 0 0 7078924.5 HCD 30 MS2 7.197544 194.5 110 40.8532 9986 9986 9976 QEplus033719.raw F4 183.4 202.4 220.2 159.4 224.2 177.7 92 4.04 1 FALSE 1.14E-05 1.09E-09 1.8 -250 34961 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAGLCCR [R].aAGLccR.[L] N-Term(TMT6plex); C5(Carbamidomethyl); C6(Carbamidomethyl) 1 P39688 Tyrosine-protein kinase Fyn OS=Mus musculus OX=10090 GN=Fyn PE=1 SV=4 P39688 Tyrosine-protein kinase Fyn OS=Mus musculus OX=10090 GN=Fyn PE=1 SV=4 0 2 2 0.4224 0 1 1 1 518.7677 1036.52812 1036.52294 5 0.00259 0/0 0 0 1743690.75 HCD 30 MS2 90.22962 562.2 110 40.8605 9988 9988 9987 QEplus033719.raw F4 526.2 444.4 634.3 464.6 638.3 665.3 144 1.61 1 FALSE 0.002628 0.05205 0.136 -250 34982 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQVEEAER [R].kQVEEAER.[L] N-Term(TMT6plex); K1(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.4116 0 1 1 1 482.94937 1446.83356 1446.83166 1.31 0.00063 0/0 0 0 28017640 HCD 30 MS2 18.32129 1009.4 63.55 40.8675 9991 9991 9987 QEplus033719.raw F4 1402.2 758.2 1064.8 1072.8 805.6 952.9 494 2.94 2 FALSE 1.14E-05 0.00025 0.781 -250 34990 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLEPER [R].gLEPER.[I] N-Term(TMT6plex) 3 P83917 Chromobox protein homolog 1 OS=Mus musculus OX=10090 GN=Cbx1 PE=1 SV=1 Q9CYJ8; Q7TPM0; P83917 Chromobox protein homolog 1 OS=Mus musculus OX=10090 GN=Cbx1 PE=1 SV=1; Cbx1 protein OS=Mus musculus OX=10090 GN=Cbx1 PE=1 SV=1; Chromobox protein homolog 1 OS=Mus musculus OX=10090 GN=Cbx1 PE=1 SV=1 0 2 2 0.298 0 1 1 1 465.26654 929.5258 929.52536 0.48 0.00022 0/0 0 0 23841140 HCD 30 MS2 50.77148 809.8 34.382 40.8698 9992 9992 9987 QEplus033719.raw F4 841.6 693.9 844.6 704 887.5 887.3 92 2.45 1 FALSE 0.002956 0.0577 0.12 -250 35015 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WSEQSSSR [K].wSEQSSSR.[Y] N-Term(TMT6plex) 1 A0A0R4J0T8 ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Arfgap3 PE=1 SV=1 A0A0R4J0T8 ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Arfgap3 PE=1 SV=1 0 2 2 0.6585 0 1 1 1 598.2995 1195.59172 1195.59048 1.04 0.00062 0/0 0 0 16120987 HCD 30 MS2 16.4349 708.1 110 40.879 9996 9996 9987 QEplus033719.raw F4 663.2 655.3 771 613.8 811.1 734.2 104 2.84 1 FALSE 5.44E-05 0.00189 0.604 -250 35047 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPGANSNSASSPK [K].sPGANSNSASSPk.[C] N-Term(TMT6plex); K13(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 3 3 0.7628 0 1 1 1 554.63367 1661.88645 1661.88588 0.34 0.00019 0/0 0 0 14052350 HCD 30 MS2 20.06369 495.1 110 40.8961 10002 10002 9998 QEplus033719.raw F4 594 222.3 471.2 671.9 292.7 718.5 363 4.89 1 FALSE 1.14E-05 3.63E-09 1.701 -250 35072 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTNKDEEECNEPR [K].dTNkDEEEcNEPR.[G] N-Term(TMT6plex); K4(TMT6plex); C9(Carbamidomethyl) 4 F8WIE5 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Hectd1 PE=1 SV=1 Q3U5E1; Q69ZR2; F8WIE5; Q3T9S4 ANK_REP_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hectd1 PE=2 SV=1; E3 ubiquitin-protein ligase HECTD1 OS=Mus musculus OX=10090 GN=Hectd1 PE=1 SV=2; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Hectd1 PE=1 SV=1; ANK_REP_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hectd1 PE=2 SV=1 1 3 3 0.7427 0 1 1 1 698.66663 2093.98532 2093.98098 2.07 0.00145 0/0 0 0 2481288.75 HCD 30 MS2 0 179.6 110 40.9062 10006 10006 9998 QEplus033719.raw F4 188.8 131 194 162 180.6 221.4 109 3.42 1 FALSE 1.14E-05 2.99E-08 1.527 -250 35078 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYGDRIER [K].aYGDRIER.[MY] N-Term(TMT6plex) 6 Q3UBU0 HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1 Q3TUD6; Q3UBU0; Q91V38; Q9CW12; Q8CCY5; P08113 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Heat shock protein 90, beta (Grp94), member 1 OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Endoplasmin OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=2" 1 2 2 0.4327 0 1 1 1 604.83356 1208.65984 1208.6585 1.11 0.00067 0/0 0 0 2675873.25 HCD 30 MS2 33.07429 392.9 110 40.9087 10007 10007 9998 QEplus033719.raw F4 436.6 343.3 420.1 256.5 454.3 446.6 314 2.45 1 FALSE 0.001946 0.0334 0.201 -250 35088 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLGYDTR [K].rLGYDTR.[V] N-Term(TMT6plex) 5 P47857 "ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=3" Q1LZL7; P47857-3; P47857; Q99K08; P47857-2 "6-phosphofructokinase (Fragment) OS=Mus musculus OX=10090 GN=Pfkm PE=2 SV=1; Isoform 3 of ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm; ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=3; ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkm PE=2 SV=1; Isoform 2 of ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm" 1 3 3 0.5764 0 1 1 1 370.5473 1109.62735 1109.62647 0.79 0.00029 0/0 0 0 84729888 HCD 30 MS2 9.517348 221.9 15.161 40.9227 10012 10012 10009 QEplus033719.raw F4 266 69.4 174.2 376.4 105.4 339.8 165 2.88 1 FALSE 0.001624 0.02648 0.235 -250 35095 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYGDRIER [K].aYGDRIER.[MY] N-Term(TMT6plex) 6 Q3UBU0 HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1 Q3TUD6; Q3UBU0; Q91V38; Q9CW12; Q8CCY5; P08113 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Heat shock protein 90, beta (Grp94), member 1 OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Endoplasmin OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=2" 1 3 3 0.5732 0 1 1 1 403.55786 1208.65903 1208.6585 0.44 0.00018 0/0 0 0 58385296 HCD 30 MS2 11.73799 483.8 19.829 40.925 10013 10013 10009 QEplus033719.raw F4 434.8 511.1 559.6 315.6 622.7 459.3 316 3.28 1 FALSE 0.0002909 0.006058 0.477 -250 35112 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YHTINGHNAEVR [K].yHTINGHNAEVR.[K] N-Term(TMT6plex) 5 O88569 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2 O88569-3; B7ZP22; O88569; A0A0N4SUM2; O88569-2 Isoform 3 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2; Heterogeneous nuclear ribonucleoproteins A2/B1 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 0 4 4 0.6904 0 1 1 1 410.71826 1639.85122 1639.85022 0.61 0.00025 0/0 0 0 27268964 HCD 30 MS2 22.04532 261.6 49.293 40.9317 10016 10016 10009 QEplus033719.raw F4 316.4 215 275 237.9 262.2 262.9 260 5.91 1 FALSE 1.14E-05 3.02E-09 1.716 -250 35120 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVTGLCR [R].rVTGLcR.[E] N-Term(TMT6plex); C6(Carbamidomethyl) 3 Q99N85 "28S ribosomal protein S18a, mitochondrial OS=Mus musculus OX=10090 GN=Mrps18a PE=2 SV=1" Q99N85; Q5U5I3; D3Z603 "28S ribosomal protein S18a, mitochondrial OS=Mus musculus OX=10090 GN=Mrps18a PE=2 SV=1; 28S ribosomal protein S18a, mitochondrial OS=Mus musculus OX=10090 GN=Mrps18a PE=1 SV=1; 28S ribosomal protein S18a, mitochondrial OS=Mus musculus OX=10090 GN=Mrps18a PE=1 SV=1" 1 3 3 0.5361 0 1 1 1 364.21661 1090.63529 1090.63526 0.02 0.00001 0/0 0 0 13657204 HCD 30 MS2 16.65623 350.7 97.115 40.934 10017 10017 10009 QEplus033719.raw F4 427.2 253.5 357.4 317.8 323.8 424.7 148 3.19 1 FALSE 0.001125 0.01486 0.334 -250 35130 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNVAGDSK [R].gNVAGDSk.[N] N-Term(TMT6plex); K8(TMT6plex) 4 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 P10126; Q3UZQ3; Q3UA81; Q3TII3 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1 0 2 2 0.2024 0 1 1 1 603.34857 1205.68987 1205.68902 0.7 0.00042 0/0 0 0 7369798.5 HCD 30 MS2 47.88525 729.3 110 40.9365 10018 10018 10009 QEplus033719.raw F4 1219 419.7 665.1 406.4 569.3 1096.3 388 2.47 1 FALSE 1.14E-05 0.0001785 0.809 -250 35135 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAMEQCHNYNAR [K].dAMEQcHNYNAR.[L] N-Term(TMT6plex); C6(Carbamidomethyl) 3 D3Z5N6 Zinc finger protein ubi-d4 OS=Mus musculus OX=10090 GN=Dpf2 PE=1 SV=1 D3Z5N6; Q3UKV4; Q61103 Zinc finger protein ubi-d4 OS=Mus musculus OX=10090 GN=Dpf2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dpf2 PE=2 SV=1; Zinc finger protein ubi-d4 OS=Mus musculus OX=10090 GN=Dpf2 PE=1 SV=1 0 3 3 0.8558 0 1 1 1 579.92657 1737.76517 1737.76345 0.99 0.00057 0/0 0 0 7114700.5 HCD 30 MS2 30.22099 341.6 110 40.939 10019 10019 10009 QEplus033719.raw F4 312.8 293.1 381.1 313 373.2 376.3 15 5.2 1 FALSE 1.14E-05 1.15E-08 1.606 -250 35140 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDIVSR [R].sDIVSR.[A] N-Term(TMT6plex) 6 Q922R8 Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=3 Q3TML0; Q922R8; F7DBQ0; Q3THH1; Q9DAB4; Q3TJL8 Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=1; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=3; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=1; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=2 SV=1; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=2 SV=1; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=2 SV=1 0 2 2 0.1623 0 1 1 1 453.26672 905.52617 905.52536 0.89 0.0004 0/0 0 0 176490400 HCD 30 MS2 8.927181 493.4 7.217 40.9463 10021 10021 10020 QEplus033719.raw F4 470.3 445.1 508.7 431.6 575.7 528.8 93 2.65 1 FALSE 0.003608 0.069 0.09 -250 35149 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDSSPDSAEDVR [K].cDSSPDSAEDVR.[K] N-Term(TMT6plex); C1(Carbamidomethyl) 1 P12763 SWISS-PROT:P12763 (Bos taurus) Alpha-2-HS-glycoprotein precursor P12763 SWISS-PROT:P12763 (Bos taurus) Alpha-2-HS-glycoprotein precursor 0 2 2 0.8701 0 1 1 1 783.84991 1566.69255 1566.69033 1.42 0.00111 0/0 0 0 6195426 HCD 30 MS2 0 171 110 40.9488 10022 10022 10020 QEplus033719.raw F4 183.3 52.4 67 36.2 648.3 39 21 4.31 1 TRUE 1.14E-05 1.14E-07 1.417 -250 35161 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQITQNTDYR [K].rQITQNTDYR.[L] N-Term(TMT6plex) 3 F8WHM5 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 F8WHM5; Q61543; F6RSH1 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 1 3 3 0.634 0 1 1 1 508.6098 1523.81485 1523.81277 1.37 0.00069 0/0 0 0 20638444 HCD 30 MS2 70.68867 1085.6 98.799 40.9534 10024 10024 10020 QEplus033719.raw F4 1087.2 865.9 1189.1 967.8 1068.6 1335.3 342 3.77 1 FALSE 1.14E-05 1.25E-05 1.029 -250 35167 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNRPSEGPLQTR [K].nNRPSEGPLQTR.[L] N-Term(TMT6plex) 3 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 Q80U89; Q68FD5; Q5SXR6 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1 0 2 2 0.6962 0 1 1 1 799.43457 1597.86186 1597.86078 0.68 0.00054 0/0 0 0 12450919 HCD 30 MS2 11.61985 96 110 40.9559 10025 10025 10020 QEplus033719.raw F4 92.2 85.6 113.5 72.5 109.2 103.3 366 2.6 1 FALSE 0.001074 0.01395 0.346 -250 35172 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAEECITR [-K].qAEEcITR.[L] N-Term(TMT6plex); C5(Carbamidomethyl) 3 O89112 Glutathione S-transferase LANCL1 OS=Mus musculus OX=10090 GN=Lancl1 PE=1 SV=1 Q8CHW0; O89112; B2KGR2 Lancl1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lancl1 PE=2 SV=1; Glutathione S-transferase LANCL1 OS=Mus musculus OX=10090 GN=Lancl1 PE=1 SV=1; Glutathione S-transferase LANCL1 (Fragment) OS=Mus musculus OX=10090 GN=Lancl1 PE=1 SV=1 0 2 2 0.5634 0 1 1 1 618.31671 1235.62615 1235.62515 0.8 0.0005 0/0 0 0 11472312 HCD 30 MS2 17.23275 690.3 110 40.9584 10026 10026 10020 QEplus033719.raw F4 1010.6 443.3 561.7 821.9 764.1 540.4 150 2.84 1 FALSE 1.14E-05 0.0002326 0.787 -250 35185 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGCGETPK [K].tGcGETPk.[N] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 2 Q7TQ48-1 Isoform 2 of Sarcalumenin OS=Mus musculus OX=10090 GN=Srl Q7TQ48; Q7TQ48-1 Sarcalumenin OS=Mus musculus OX=10090 GN=Srl PE=1 SV=2; Isoform 2 of Sarcalumenin OS=Mus musculus OX=10090 GN=Srl 0 2 2 0.5896 0 1 1 1 654.35516 1307.70305 1307.70296 0.07 0.00005 0/0 0 0 8964245 HCD 30 MS2 4.473514 670.5 110 40.9635 10028 10028 10020 QEplus033719.raw F4 1286.7 119.3 578 1012.1 147.7 879.4 366 2.51 1 FALSE 1.14E-05 0.0003123 0.762 -250 35195 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGNQAEGAGER [K].iGNQAEGAGER.[H] N-Term(TMT6plex) 7 P57724 Poly(rC)-binding protein 4 OS=Mus musculus OX=10090 GN=Pcbp4 PE=1 SV=1 A0A087WPG7; P57724; Q9DB01; A0A087WP16; A0A1L1SQL8; Q8BP63; A0A0R4J044 Poly(rC)-binding protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp4 PE=1 SV=1; Poly(rC)-binding protein 4 OS=Mus musculus OX=10090 GN=Pcbp4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pcbp4 PE=2 SV=1; Poly(rC)-binding protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp4 PE=1 SV=1; Poly(rC)-binding protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pcbp4 PE=2 SV=1; Poly(rC)-binding protein 4 OS=Mus musculus OX=10090 GN=Pcbp4 PE=1 SV=1 0 2 2 0.607 0 1 1 1 665.84906 1330.69084 1330.69126 -0.31 -0.00021 0/0 0 0 8208722 HCD 30 MS2 0 368.1 110 40.966 10029 10029 10020 QEplus033719.raw F4 386.9 322.1 384.8 250.8 507.3 356.7 160 3.69 1 FALSE 1.14E-05 7.36E-10 1.832 -250 35209 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQPFSSSR [K].nQPFSSSR.[Q] N-Term(TMT6plex) 2 A0A3Q4L2Q3 "Poly(A) RNA polymerase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Mtpap PE=1 SV=1" A0A3Q4L2Q3; Q9D0D3 "Poly(A) RNA polymerase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Mtpap PE=1 SV=1; Poly(A) RNA polymerase, mitochondrial OS=Mus musculus OX=10090 GN=Mtpap PE=1 SV=1" 0 2 2 0.521 0 1 1 1 576.30566 1151.60405 1151.60065 2.95 0.0017 0/0 0 0 7765701.5 HCD 30 MS2 15.31658 462.2 110 40.9758 10032 10032 10031 QEplus033719.raw F4 458.5 369.1 511.5 435.1 466.8 532.4 173 2.86 1 FALSE 0.004707 0.08279 0.054 -250 35225 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHEVFQR [K].eHEVFQR.[D] N-Term(TMT6plex) 2 Q3TFF0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja2 PE=2 SV=1 Q3TFF0; Q9QYJ0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja2 PE=2 SV=1; DnaJ homolog subfamily A member 2 OS=Mus musculus OX=10090 GN=Dnaja2 PE=1 SV=1 0 3 3 0.5988 0 1 1 1 391.87903 1173.62253 1173.62139 0.98 0.00038 0/0 0 0 85203800 HCD 30 MS2 19.62387 349.6 15.288 40.9806 10034 10034 10031 QEplus033719.raw F4 397.8 217.3 335.7 401.4 378.2 367 209 3.34 1 FALSE 1.14E-05 0.0001083 0.85 -250 35250 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHEVFQR [K].eHEVFQR.[D] N-Term(TMT6plex) 2 Q3TFF0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja2 PE=2 SV=1 Q3TFF0; Q9QYJ0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja2 PE=2 SV=1; DnaJ homolog subfamily A member 2 OS=Mus musculus OX=10090 GN=Dnaja2 PE=1 SV=1 0 2 2 0.5935 0 1 1 1 587.31488 1173.62248 1173.62139 0.93 0.00055 0/0 0 0 10289783 HCD 30 MS2 8.425063 690.1 110 40.9901 10038 10038 10031 QEplus033719.raw F4 751.9 519.3 737 629.4 706.2 796.8 209 2.78 1 FALSE 0.0002719 0.005448 0.491 -250 35255 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQAEALQR [R].tQAEALQR.[L] N-Term(TMT6plex) 1 Q8VIM9 Immunity-related GTPase family Q protein OS=Mus musculus OX=10090 GN=Irgq PE=1 SV=1 Q8VIM9 Immunity-related GTPase family Q protein OS=Mus musculus OX=10090 GN=Irgq PE=1 SV=1 0 2 2 0.4863 0 1 1 1 573.32758 1145.64787 1145.6476 0.24 0.00014 0/0 0 0 9800585 HCD 30 MS2 13.95758 565.5 110 40.9926 10039 10039 10031 QEplus033719.raw F4 714.3 397.7 616.3 515.7 516.3 632.8 365 2.92 1 FALSE 1.14E-05 7.73E-05 0.878 -250 35262 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELTSAEQR [K].eLTSAEQR.[N] N-Term(TMT6plex) 4 B2RWW2 Golgb1 protein OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1 B2RWW2; B7ZNF9; E9QAH1; E9PVZ8 "Golgb1 protein OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1; Golgb1 protein OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1; Golgi autoantigen, golgin subfamily b, macrogolgin 1 OS=Mus musculus OX=10090 GN=Golgb1 PE=1 SV=1; Golgi autoantigen, golgin subfamily b, macrogolgin 1 OS=Mus musculus OX=10090 GN=Golgb1 PE=1 SV=1" 0 2 2 0.4081 0 1 1 1 581.81708 1162.62688 1162.62653 0.3 0.00017 0/0 0 0 9708448 HCD 30 MS2 15.48326 583.7 110 40.9951 10040 10040 10031 QEplus033719.raw F4 612.3 475.8 616 509 670.1 618.9 267 2.72 1 FALSE 1.14E-05 0.0009586 0.666 -250 35267 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTAQEVDTYR [R].rTAQEVDTYR.[R] N-Term(TMT6plex) 10 Q5U222 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1 B1ARC0; Q3UXW3; Q5U222; Q3V0Z8; B1ARB9; O35662; A1L333; S4R1I6; Q61656; Q8BTS0 RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=8; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=8; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Hlr1 PE=4 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 1 3 3 0.5687 0 1 1 1 489.93015 1467.77588 1467.77532 0.38 0.00019 0/0 0 0 8766330 HCD 30 MS2 35.58604 656.3 110 40.9976 10041 10041 10031 QEplus033719.raw F4 672 548 696.3 516.7 808.4 696.6 252 4.73 1 FALSE 1.14E-05 6.62E-09 1.651 -250 35274 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATEMEAESR [R].aTEMEAESR.[S] N-Term(TMT6plex) 3 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 E9Q7G0; A0A1B0GT61; A0A1B0GSW3 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1; Nuclear mitotic apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1; Nuclear mitotic apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 0 2 2 0.65 0 1 1 1 626.80652 1252.60576 1252.60408 1.34 0.00084 0/0 0 0 14820946 HCD 30 MS2 11.36514 523.9 110 41.0049 10043 10043 10042 QEplus033719.raw F4 502.7 605.5 576.1 348.4 649.8 461.1 102 3.2 1 FALSE 1.14E-05 5.69E-06 1.094 -250 35281 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MLSCAGADR [K].mLScAGADR.[LS] N-Term(TMT6plex); M1(Oxidation); C4(Carbamidomethyl) 6 A2AM97 Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1 P86048; A0A1B0GXC3; I7HLV2; Q3THJ6; A2AM97; B7FAU6 60S ribosomal protein L10-like OS=Mus musculus OX=10090 GN=Rpl10l PE=2 SV=1; 60S ribosomal protein L10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=4 SV=1; 60S ribosomal protein L10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=1 SV=1; Ribosomal_L16 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1; Ribosomal protein 10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=4 SV=1 0 2 2 0.6 0 1 1 1 613.29846 1225.58965 1225.58666 2.44 0.00149 0/0 0 0 9447395 HCD 30 MS2 7.956712 360.7 110 41.0074 10044 10044 10042 QEplus033719.raw F4 339.3 291.9 459.2 291.6 369.8 412.5 69 2.5 1 FALSE 0.0002119 0.004276 0.52 -250 35286 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDGTWGTEHR [K].eDGTWGTEHR.[E] N-Term(TMT6plex) 1 P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 0 3 3 0.7047 0 1 1 1 472.89575 1416.6727 1416.67052 1.54 0.00073 0/0 0 0 66860508 HCD 30 MS2 38.9833 349.9 11.926 41.0119 10046 10046 10042 QEplus033719.raw F4 380.7 252 414.7 273.3 377.7 401.1 49 3.86 1 FALSE 1.14E-05 2.60E-06 1.158 -250 35313 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QMDYER [K].qMDYER.[Q] N-Term(TMT6plex) 2 Q6P542 ATP-binding cassette sub-family F member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=1 SV=1 Q6P542; Q5RL55 "ATP-binding cassette sub-family F member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=1 SV=1; ATP-binding cassette, sub-family F (GCN20), member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=2 SV=1" 0 2 2 0.4748 0 1 1 1 535.76141 1070.51555 1070.51381 1.63 0.00087 0/0 0 0 12083015 HCD 30 MS2 31.06823 845.2 110 41.0212 10050 10050 10042 QEplus033719.raw F4 830.2 689.9 881.9 810.9 995 863.3 54 2.38 1 FALSE 0.004716 0.08297 0.053 -250 35321 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDGTWGTEHR [K].eDGTWGTEHR.[E] N-Term(TMT6plex) 1 P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 0 2 2 0.759 0 1 1 1 708.83929 1416.67131 1416.67052 0.56 0.0004 0/0 0 0 6931708 HCD 30 MS2 32.51391 373 110 41.0237 10051 10051 10042 QEplus033719.raw F4 419.6 296.2 409.1 323.5 389.9 399.8 48 3.32 1 FALSE 1.14E-05 1.35E-05 1.023 -250 35329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTGVQTFR [K].rTGVQTFR.[R] N-Term(TMT6plex) 5 Q8CIE6 Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2 Q63ZW9; Q8CIE6; F6XJN3; F8WHL2; Q8BTF0 Copa protein (Fragment) OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2; Coatomer subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Copa PE=1 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1 1 2 2 0.4346 0 1 1 1 597.35217 1193.69707 1193.69522 1.55 0.00092 0/0 0 0 5626887.5 HCD 30 MS2 0 249.5 110 41.0262 10052 10052 10042 QEplus033719.raw F4 241.6 213.2 278.4 202.7 283.5 277.4 404 2.14 1 FALSE 0.007193 0.1134 -0.028 -250 35337 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSPLSSR [R].dSPLSSR.[L] N-Term(TMT6plex) 1 Q9JK92 Heat shock protein beta-8 OS=Mus musculus OX=10090 GN=Hspb8 PE=1 SV=1 Q9JK92 Heat shock protein beta-8 OS=Mus musculus OX=10090 GN=Hspb8 PE=1 SV=1 0 2 2 0.3153 0 1 1 1 495.77502 990.54277 990.54174 1.04 0.00052 0/0 0 0 44699140 HCD 30 MS2 15.56445 542.3 25.941 41.0335 10054 10054 10053 QEplus033719.raw F4 592.5 339.4 561.2 538.2 491.9 730.5 238 2.22 1 FALSE 0.001567 0.02396 0.251 -250 35364 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRGDYDGIGGR [R].gRGDYDGIGGR.[G] N-Term(TMT6plex) 3 B9EKE9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1 B9EKE9; B7ZWF1; Q3TQX5 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=1 1 3 3 0.6811 0 1 1 1 451.23578 1351.69278 1351.69159 0.88 0.0004 0/0 0 0 51065776 HCD 30 MS2 21.18894 378.1 25.404 41.0496 10061 10061 10053 QEplus033719.raw F4 390.8 323.4 381.7 246 579.2 347.8 216 3.92 1 FALSE 1.14E-05 2.94E-08 1.528 -250 35370 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAVTGSVER [K].gAVTGSVER.[T] N-Term(TMT6plex) 7 Q9CY19 Perilipin OS=Mus musculus OX=10090 GN=Plin2 PE=2 SV=1 Q9CY19; P43883; Q541S0; Q8C5B5; B1AXR5; Q3U711; B1AXR3 Perilipin OS=Mus musculus OX=10090 GN=Plin2 PE=2 SV=1; Perilipin-2 OS=Mus musculus OX=10090 GN=Plin2 PE=1 SV=2; Perilipin OS=Mus musculus OX=10090 GN=Plin2 PE=2 SV=1; Perilipin OS=Mus musculus OX=10090 GN=Plin2 PE=2 SV=1; Perilipin-2 (Fragment) OS=Mus musculus OX=10090 GN=Plin2 PE=1 SV=1; Perilipin OS=Mus musculus OX=10090 GN=Plin2 PE=2 SV=1; Perilipin-2 (Fragment) OS=Mus musculus OX=10090 GN=Plin2 PE=1 SV=1 0 2 2 0.3938 0 1 1 1 552.8147 1104.62212 1104.62105 0.96 0.00053 0/0 0 0 26484026 HCD 30 MS2 6.006519 682.3 74.001 41.0518 10062 10062 10053 QEplus033719.raw F4 712.5 535.3 747 814.7 622.4 661.9 291 2.92 1 FALSE 1.14E-05 3.77E-06 1.128 -250 35376 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTAEEEDEADPKR [K].rTAEEEDEADPkR.[Q] N-Term(TMT6plex); K12(TMT6plex) 2 Q66JR8 Ptms protein OS=Mus musculus OX=10090 GN=Ptms PE=2 SV=1 Q66JR8; Q9D0J8 Ptms protein OS=Mus musculus OX=10090 GN=Ptms PE=2 SV=1; Parathymosin OS=Mus musculus OX=10090 GN=Ptms PE=1 SV=3 2 4 4 0.7189 0 1 1 1 501.76602 2004.04226 2004.03982 1.22 0.00061 0/0 0 0 9957142 HCD 30 MS2 21.84439 670.3 110 41.0543 10063 10063 10053 QEplus033719.raw F4 730.6 621.8 710.6 464.7 883.3 611.1 322 3.38 1 FALSE 1.14E-05 2.77E-06 1.153 -250 35388 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQITQNTDYR [K].rQITQNTDYR.[L] N-Term(TMT6plex) 3 F8WHM5 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 F8WHM5; Q61543; F6RSH1 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 1 2 2 0.6954 0 1 1 1 762.41095 1523.81462 1523.81277 1.22 0.00093 0/0 0 0 2986409 HCD 30 MS2 0 60.7 110 41.0642 10066 10066 10064 QEplus033719.raw F4 52.9 55.5 65.6 46.8 67.1 76.1 340 3.25 1 FALSE 0.0002019 0.004193 0.522 -250 35396 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTGVQTFR [K].rTGVQTFR.[R] N-Term(TMT6plex) 5 Q8CIE6 Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2 Q63ZW9; Q8CIE6; F6XJN3; F8WHL2; Q8BTF0 Copa protein (Fragment) OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2; Coatomer subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Copa PE=1 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1 1 3 3 0.5899 0 1 1 1 398.57031 1193.69638 1193.69522 0.97 0.00039 0/0 0 0 89564968 HCD 30 MS2 18.12679 259.4 13.891 41.0687 10068 10068 10064 QEplus033719.raw F4 230.8 215.4 297.3 221 305.6 286.3 402 3.78 1 FALSE 1.14E-05 6.73E-05 0.89 -250 35429 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYNALHQR [K].eYNALHQR.[H] N-Term(TMT6plex) 17 B8X349 JNK-interacting leucine zipper protein long form OS=Mus musculus OX=10090 GN=Spag9 PE=2 SV=1 Q9ESN9-5; B8X349; E9Q6E0; Q9ESN9-4; Q8CHB5; Q9ESN9-6; K3W4S4; Q8CBN9; Q9ESN9-3; E9Q6B6; Q58A65; Q58A65-2; J3QNR6; Q6NV54; Q6P1F1; Q9ESN9; Q9ESN9-2 Isoform 3a of C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3; JNK-interacting leucine zipper protein long form OS=Mus musculus OX=10090 GN=Spag9 PE=2 SV=1; C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=1 SV=1; Isoform 1d of C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3; MKIAA1066 protein (Fragment) OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=2 SV=2; Isoform 1e of C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3; C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=2 SV=1; Isoform 1b of C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3; C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=1 SV=1; C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=2; Isoform 2 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=1 SV=1; Mitogen-activated protein kinase 8 interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=2 SV=1; Mapk8ip3 protein OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=2 SV=1; C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3 PE=1 SV=1; Isoform 1a of C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus OX=10090 GN=Mapk8ip3 0 3 3 0.5867 0 1 1 1 420.56229 1259.67231 1259.6694 2.31 0.00097 0/0 0 0 15976014 HCD 30 MS2 56.77914 429.4 33.921 41.0824 10074 10074 10064 QEplus033719.raw F4 525.2 258.1 446.1 404.6 399.8 542.6 232 3.75 1 FALSE 5.44E-05 0.002213 0.589 -250 35435 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAATAIYR [K].rAATAIYR.[L] N-Term(TMT6plex) 4 Q64012-2 Isoform 1 of RNA-binding protein Raly OS=Mus musculus OX=10090 GN=Raly Q64012-2; A2AU60; A2AU61; Q3TGD3 Isoform 1 of RNA-binding protein Raly OS=Mus musculus OX=10090 GN=Raly; RNA-binding protein Raly (Fragment) OS=Mus musculus OX=10090 GN=Raly PE=1 SV=1; RNA-binding protein Raly (Fragment) OS=Mus musculus OX=10090 GN=Raly PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Raly PE=2 SV=1 1 2 2 0.0564 0 1 1 1 575.84924 1150.69121 1150.68941 1.57 0.0009 0/0 0 0 9168149 HCD 30 MS2 48.14502 504.8 110 41.0898 10076 10076 10075 QEplus033719.raw F4 484.1 453.7 543.4 409.2 582.9 555.3 215 1.95 1 FALSE 0.006077 0.09984 0.007 -250 35445 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVNCEVDQR [K].qVNcEVDQR.[F] N-Term(TMT6plex); C4(Carbamidomethyl) 3 Q5SWU9 Acetyl-CoA carboxylase 1 OS=Mus musculus OX=10090 GN=Acaca PE=1 SV=1 Q5SWU9-2; Q5SWU9; V9GXY1 Isoform 2 of Acetyl-CoA carboxylase 1 OS=Mus musculus OX=10090 GN=Acaca; Acetyl-CoA carboxylase 1 OS=Mus musculus OX=10090 GN=Acaca PE=1 SV=1; Acetyl-CoA carboxylase 1 (Fragment) OS=Mus musculus OX=10090 GN=Acaca PE=1 SV=1 0 2 2 0.713 0 1 1 1 688.84381 1376.68035 1376.67898 0.99 0.00068 0/0 0 0 7634974.5 HCD 30 MS2 15.77349 267 110 41.0923 10077 10077 10075 QEplus033719.raw F4 278.6 220.5 296.7 223.3 303.7 279.4 121 3.24 1 FALSE 1.14E-05 2.13E-06 1.175 -250 35457 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVDRPGSK [R].eVDRPGSk.[V] N-Term(TMT6plex); K8(TMT6plex) 8 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB15; Q3UB90; Q3U9L3; Q3T9U9; A0A087WQK0; P27659; A0A087WNS0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 (Fragment) OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=1 0 3 3 0.5491 0 1 1 1 449.26614 1345.78388 1345.78398 -0.08 -0.00004 0/0 0 0 101674208 HCD 30 MS2 10.30746 719.8 11.837 41.0968 10079 10079 10075 QEplus033719.raw F4 981.2 502.7 795.6 659.8 695.1 684.7 443 2.24 1 FALSE 0.001351 0.01924 0.288 -250 35485 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPQNSSQSADGLR [R].nPQNSSQSADGLR.[C] N-Term(TMT6plex) 1 Q14C24 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 OS=Mus musculus OX=10090 GN=U2af1 PE=1 SV=1 Q14C24 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 OS=Mus musculus OX=10090 GN=U2af1 PE=1 SV=1 0 2 2 0.6173 0 1 1 1 801.90594 1602.80461 1602.80333 0.8 0.00064 0/0 0 0 8895816 HCD 30 MS2 0 245.8 110 41.1089 10084 10084 10075 QEplus033719.raw F4 258.4 231.7 293.2 172.2 273.4 245.6 180 4.52 1 FALSE 1.14E-05 3.88E-12 2.265 -250 35489 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EANHNVSAPYGR [R].eANHNVSAPYGR.[I] N-Term(TMT6plex) 7 Q7TMB8 Cytoplasmic FMR1-interacting protein 1 OS=Mus musculus OX=10090 GN=Cyfip1 PE=1 SV=1 Q7TMB8-2; A0A0R4J119; Q7TMB8; A0A0U1RQ05; Q5SQX6; F6QD74; Q6PGK0 Isoform 2 of Cytoplasmic FMR1-interacting protein 1 OS=Mus musculus OX=10090 GN=Cyfip1; Cytoplasmic FMR1-interacting protein OS=Mus musculus OX=10090 GN=Cyfip1 PE=1 SV=1; Cytoplasmic FMR1-interacting protein 1 OS=Mus musculus OX=10090 GN=Cyfip1 PE=1 SV=1; Cytoplasmic FMR1-interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Cyfip1 PE=1 SV=1; Cytoplasmic FMR1-interacting protein 2 OS=Mus musculus OX=10090 GN=Cyfip2 PE=1 SV=2; Cytoplasmic FMR1-interacting protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Cyfip2 PE=1 SV=1; Cyfip2 protein OS=Mus musculus OX=10090 GN=Cyfip2 PE=2 SV=1 0 3 3 0.5857 0 1 1 1 515.26611 1543.78379 1543.78147 1.5 0.00077 0/0 0 0 6463831.5 HCD 30 MS2 43.29588 867.1 110 41.1113 10085 10085 10075 QEplus033719.raw F4 923.5 600.7 901 860.5 954.2 962.5 175 2.8 1 FALSE 1.14E-05 9.98E-05 0.857 -250 35499 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QASHIVQQAQR [K].qASHIVQQAQR.[E] N-Term(TMT6plex) 5 Q8K1N2 Pleckstrin homology-like domain family B member 2 OS=Mus musculus OX=10090 GN=Phldb2 PE=1 SV=2 F6QU68; Q8K1N2; Q8BZE3; Q8K1N2-2; D3Z069 Pleckstrin homology-like domain family B member 2 (Fragment) OS=Mus musculus OX=10090 GN=Phldb2 PE=1 SV=1; Pleckstrin homology-like domain family B member 2 OS=Mus musculus OX=10090 GN=Phldb2 PE=1 SV=2; PH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Phldb2 PE=2 SV=1; Isoform 2 of Pleckstrin homology-like domain family B member 2 OS=Mus musculus OX=10090 GN=Phldb2; Pleckstrin homology-like domain family B member 2 (Fragment) OS=Mus musculus OX=10090 GN=Phldb2 PE=1 SV=1 0 3 3 0.6151 0 1 1 1 498.9502 1494.83603 1494.83384 1.47 0.00073 0/0 0 0 8149250.5 HCD 30 MS2 18.29099 381.4 110 41.1212 10088 10088 10086 QEplus033719.raw F4 408.1 356.3 397.7 360.1 387.2 379.1 431 4.65 1 FALSE 1.14E-05 3.38E-07 1.327 -250 35513 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRDFNEECPR [K].sRDFNEEcPR.[L] N-Term(TMT6plex); C8(Carbamidomethyl) 2 O55222 Integrin-linked protein kinase OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2 O55222; D3YZA5 Integrin-linked protein kinase OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2; Integrin-linked protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2 1 3 3 0.7722 0 1 1 1 513.5788 1538.72184 1538.72191 -0.05 -0.00002 0/0 0 0 15280896 HCD 30 MS2 8.888694 493.3 110 41.1304 10092 10092 10086 QEplus033719.raw F4 517.7 444.1 534.9 394 607.4 461.4 66 4.74 1 FALSE 1.14E-05 7.16E-08 1.455 -250 35519 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVESTASAAGPSR [K].qVESTASAAGPSR.[F] N-Term(TMT6plex) 3 Q80UG5 Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 Q80UG5-3; Q80UG5; A2A6U3 Isoform 3 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 0 2 2 0.6633 0 1 1 1 745.39508 1489.78288 1489.7808 1.4 0.00104 0/0 0 0 11079645 HCD 30 MS2 0 296.4 110 41.1354 10094 10094 10086 QEplus033719.raw F4 293.4 319.6 338.7 206.2 334.9 285.8 261 4.01 1 FALSE 1.14E-05 2.52E-11 2.11 -250 35527 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTAEEEDEADPKR [K].rTAEEEDEADPkR.[Q] N-Term(TMT6plex); K12(TMT6plex) 2 Q66JR8 Ptms protein OS=Mus musculus OX=10090 GN=Ptms PE=2 SV=1 Q66JR8; Q9D0J8 Ptms protein OS=Mus musculus OX=10090 GN=Ptms PE=2 SV=1; Parathymosin OS=Mus musculus OX=10090 GN=Ptms PE=1 SV=3 2 3 3 0.8122 0 1 1 1 668.68524 2004.04117 2004.03982 0.68 0.00045 0/0 0 0 9390034 HCD 30 MS2 17.9495 301.4 110 41.1379 10095 10095 10086 QEplus033719.raw F4 277.9 294.5 345.8 208.4 391.1 290.6 323 4.1 1 FALSE 1.14E-05 6.13E-08 1.468 -250 35530 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IEGTQADTR [R].iEGTQADTR.[E] N-Term(TMT6plex) 2 Q6KAR6 Exocyst complex component 3 OS=Mus musculus OX=10090 GN=Exoc3 PE=1 SV=2 Q6KAR6; Q8BIT7 Exocyst complex component 3 OS=Mus musculus OX=10090 GN=Exoc3 PE=1 SV=2; Exocyst complex component 3 OS=Mus musculus OX=10090 GN=Exoc3 PE=2 SV=1 0 2 2 0.4708 0 1 1 1 610.32727 1219.64726 1219.648 -0.6 -0.00037 0/0 0 0 9122017 HCD 30 MS2 24.59721 447.6 110 41.1405 10096 10096 10086 QEplus033719.raw F4 474.3 347.3 456.9 504.6 393.4 509.4 249 3.08 1 FALSE 1.14E-05 9.01E-05 0.866 -250 35545 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVDRPGSK [R].eVDRPGSk.[V] N-Term(TMT6plex); K8(TMT6plex) 8 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB15; Q3UB90; Q3U9L3; Q3T9U9; A0A087WQK0; P27659; A0A087WNS0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 (Fragment) OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=1 0 2 2 0.5468 0 1 1 1 673.3963 1345.78533 1345.78398 1 0.00067 0/0 0 0 12006803 HCD 30 MS2 12.71479 345.6 110 41.1503 10099 10099 10097 QEplus033719.raw F4 445.1 256.8 379.6 346.2 327.9 318 445 2.03 1 FALSE 0.0001919 0.004002 0.527 -250 35559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADDANVVR [R].aDDANVVR.[D] N-Term(TMT6plex) 4 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087; Q60785; Q99LL6 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4; Alpha-1 type I procollagen (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1; Col1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1 0 2 2 0.5226 0 1 1 1 544.7984 1088.58953 1088.58975 -0.21 -0.00011 0/0 0 0 32648794 HCD 30 MS2 15.47487 982.9 63.638 41.1571 10102 10102 10097 QEplus033719.raw F4 999.6 739.1 1012.3 1056.2 896.4 1194 192 2.87 1 FALSE 1.14E-05 0.000687 0.695 -250 35575 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEISPDER [R].sEISPDER.[A] N-Term(TMT6plex) 3 Q6NXL1 "Sec24-related gene family, member D (S. cerevisiae) OS=Mus musculus OX=10090 GN=Sec24d PE=1 SV=1" Q80V21; Q6NXL1; Q8R0M3 "Sec24d protein OS=Mus musculus OX=10090 GN=Sec24d PE=2 SV=1; Sec24-related gene family, member D (S. cerevisiae) OS=Mus musculus OX=10090 GN=Sec24d PE=1 SV=1; Sec24d protein (Fragment) OS=Mus musculus OX=10090 GN=Sec24d PE=2 SV=1" 0 2 2 0.476 0 1 1 1 581.30206 1161.59685 1161.5949 1.68 0.00098 0/0 0 0 15626031 HCD 30 MS2 17.20773 757.7 110 41.1618 10104 10104 10097 QEplus033719.raw F4 830.2 692.1 796.3 558.6 927.9 741.1 164 2.71 1 FALSE 0.0004793 0.007639 0.446 -250 35580 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENYPHVR [K].eNYPHVR.[T] N-Term(TMT6plex) 3 Q9DBG5 Perilipin-3 OS=Mus musculus OX=10090 GN=Plin3 PE=1 SV=1 Q9DBG5; A0A3B2WCW2; Q2XSQ4 Perilipin-3 OS=Mus musculus OX=10090 GN=Plin3 PE=1 SV=1; Perilipin-3 (Fragment) OS=Mus musculus OX=10090 GN=Plin3 PE=1 SV=1; Perilipin OS=Mus musculus OX=10090 GN=Plin3 PE=2 SV=1 0 3 3 0.5687 0 1 1 1 381.87515 1143.6109 1143.61082 0.07 0.00003 0/0 0 0 15290952 HCD 30 MS2 54.4402 490.8 48.885 41.1641 10105 10105 10097 QEplus033719.raw F4 512 378.5 518 433.9 580.3 522 129 3.13 1 FALSE 0.001335 0.01867 0.293 -250 35583 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGQVVSTSAR [R].eGQVVSTSAR.[H] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.3469 0 1 1 1 631.84882 1262.69036 1262.69019 0.13 0.00008 0/0 0 0 13593393 HCD 30 MS2 30.30552 694.2 110 41.1666 10106 10106 10097 QEplus033719.raw F4 731.2 365.2 608.3 944 456.9 1059.8 327 2.71 2 FALSE 1.14E-05 1.64E-07 1.386 -250 35587 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVESTASAAGPSR [K].qVESTASAAGPSR.[F] N-Term(TMT6plex) 3 Q80UG5 Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 Q80UG5-3; Q80UG5; A2A6U3 Isoform 3 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 0 3 3 0.6908 0 1 1 1 497.2652 1489.78104 1489.7808 0.16 0.00008 0/0 0 0 13443454 HCD 30 MS2 27.02964 401.2 110 41.1691 10107 10107 10097 QEplus033719.raw F4 440.2 303.7 410.4 308.7 482.9 461.4 258 5.11 1 FALSE 1.14E-05 1.71E-10 1.953 -250 35609 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVQEDR [K].iVQEDR.[A] N-Term(TMT6plex) 2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q3TAZ3; Q9JHU4 DHC_N2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 2 2 0.2421 0 1 1 1 494.78525 988.56322 988.56248 0.75 0.00037 0/0 0 0 51395972 HCD 30 MS2 13.25408 690.5 28.89 41.1811 10111 10111 10108 QEplus033719.raw F4 714.3 493.6 710.2 678 833.8 713 236 2.52 1 FALSE 0.002413 0.04801 0.148 -250 35627 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVVGPQGAR [R].gVVGPQGAR.[G] N-Term(TMT6plex) 4 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 E0CXI2; Q3TUE2; Q01149; Q3TU64 Collagen alpha-2(I) chain (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.4755 0 1 1 1 535.32007 1069.63286 1069.63156 1.22 0.00065 0/0 0 0 44239320 HCD 30 MS2 31.93471 608.3 27.014 41.1857 10113 10113 10108 QEplus033719.raw F4 604.2 530.7 682.7 543.1 729.8 559.1 123 2.65 1 FALSE 1.14E-05 0.0001046 0.853 -250 35631 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ICYEHR [K].icYEHR.[L] N-Term(TMT6plex); C2(Carbamidomethyl) 4 O88844 Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2 Q3TJ51; O88844; Q5HZJ8; Q8C338 Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1 0 3 3 0.5896 0 1 1 1 369.52554 1106.56208 1106.56143 0.58 0.00022 0/0 0 0 14933098 HCD 30 MS2 31.16831 388.5 72.604 41.1879 10114 10114 10108 QEplus033719.raw F4 455.6 284.4 408 342.3 418.7 421.8 154 3.07 1 FALSE 0.001988 0.03499 0.194 -250 35639 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATSTEPSNSASSSK [R].aTSTEPSNSASSSk.[S] N-Term(TMT6plex); K14(TMT6plex) 3 A0A0R4J078 UBX domain-containing protein 4 OS=Mus musculus OX=10090 GN=Ubxn4 PE=1 SV=1 Q6ZQF6; A0A0R4J078; Q8VCH8 MKIAA0242 protein (Fragment) OS=Mus musculus OX=10090 GN=Ubxn4 PE=2 SV=1; UBX domain-containing protein 4 OS=Mus musculus OX=10090 GN=Ubxn4 PE=1 SV=1; UBX domain-containing protein 4 OS=Mus musculus OX=10090 GN=Ubxn4 PE=1 SV=1 0 3 3 0.6622 0 1 1 1 604.65137 1811.93955 1811.93871 0.46 0.00028 0/0 0 0 6227991.5 HCD 30 MS2 16.20611 461.7 110 41.1904 10115 10115 10108 QEplus033719.raw F4 484 346.8 495.5 435.9 523.2 484.8 283 4.44 1 FALSE 1.14E-05 2.82E-07 1.342 -250 35644 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTETQEK [K].kTETQEk.[N] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 5 P20065 Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x PE=1 SV=1 P20065-2; A0A0N4SVF0; P20065; A6H6H4; P21752 Isoform Short of Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x; Thymosin beta-10 OS=Mus musculus OX=10090 GN=Tmsb10 PE=1 SV=1; Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x PE=1 SV=1; Thymosin beta OS=Mus musculus OX=10090 GN=Tmsb10 PE=1 SV=1; SWISS-PROT:P21752 (Bos taurus) Thymosin beta-9 1 3 3 0.531 0 1 1 1 517.65027 1550.93625 1550.93568 0.37 0.00019 0/0 0 0 7421581 HCD 30 MS2 25.38279 908.7 110 41.1929 10116 10116 10108 QEplus033719.raw F4 1833.6 337.4 793.6 585.4 629.5 1272.9 314 2.58 1 TRUE 0.0005556 0.008345 0.433 -250 35651 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SESENWR [R].sESENWR.[I] N-Term(TMT6plex) 10 G3UWR2 GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1 G3UYR9; Q8C585; E9Q2M5; G3UXF2; G3UZX7; G3UZS9; Q3TUA5; G3UWR2; G3UYG6; Q6Y7W8 GRB10-interacting GYF protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; GYF domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gigyf2 PE=2 SV=1; GRB10-interacting GYF protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; GRB10-interacting GYF protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; GRB10-interacting GYF protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; GRB10-interacting GYF protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; GYF domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gigyf2 PE=2 SV=1; GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=2 0 2 2 0.6462 0 1 1 1 568.78082 1136.55437 1136.55337 0.88 0.0005 0/0 0 0 5915656.5 HCD 30 MS2 0 435.6 110 41.1954 10117 10117 10108 QEplus033719.raw F4 464.4 368.4 481.1 323.1 473.8 503.1 97 2.6 1 FALSE 0.001473 0.02137 0.27 -250 35656 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENYPHVR [K].eNYPHVR.[T] N-Term(TMT6plex) 3 Q9DBG5 Perilipin-3 OS=Mus musculus OX=10090 GN=Plin3 PE=1 SV=1 Q9DBG5; A0A3B2WCW2; Q2XSQ4 Perilipin-3 OS=Mus musculus OX=10090 GN=Plin3 PE=1 SV=1; Perilipin-3 (Fragment) OS=Mus musculus OX=10090 GN=Plin3 PE=1 SV=1; Perilipin OS=Mus musculus OX=10090 GN=Plin3 PE=2 SV=1 0 2 2 0.2255 0 1 1 1 572.31146 1143.61565 1143.61082 4.22 0.00241 0/0 0 0 3418503 HCD 30 MS2 20.44233 410.5 110 41.1979 10118 10118 10108 QEplus033719.raw F4 472.2 360.5 419.4 326.5 500.2 383.9 138 2.35 1 FALSE 0.001464 0.02111 0.272 -250 35668 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERNTDQASMPDNTAAQK [K].eRNTDQASmPDNTAAQk.[V] N-Term(TMT6plex); M9(Oxidation); K17(TMT6plex) 7 Q69ZX3; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; A0A2R8VHF9; A0A338P6K2; O08638-2; O08638; Q8VDD5; E9QPE7 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2 1 3 3 0.7483 0 1 1 1 784.3963 2351.17435 2351.16616 3.48 0.00273 0/0 0 0 5479907.5 HCD 30 MS2 0 130.1 110 41.2077 10121 10121 10119 QEplus033719.raw F4 125.6 114.7 163.9 80.9 174.7 120.8 236 5.76 2 FALSE 1.14E-05 2.51E-14 2.681 -250 35673 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSRPEANEALER [K].nSRPEANEALER.[G] N-Term(TMT6plex) 1 Q9QYB1 Chloride intracellular channel protein 4 OS=Mus musculus OX=10090 GN=Clic4 PE=1 SV=3 Q9QYB1 Chloride intracellular channel protein 4 OS=Mus musculus OX=10090 GN=Clic4 PE=1 SV=3 0 3 3 0.7305 0 1 1 1 538.95166 1614.84043 1614.83971 0.44 0.00024 0/0 0 0 38431208 HCD 30 MS2 6.011766 496 51.588 41.21 10122 10122 10119 QEplus033719.raw F4 579.9 436.7 524.1 408.3 547.5 479.2 279 5.01 1 FALSE 1.14E-05 3.02E-08 1.526 -250 35680 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGCPRPNCR [R].iGcPRPNcR.[R] N-Term(TMT6plex); C3(Carbamidomethyl); C8(Carbamidomethyl) 1 Q9CZX7 "Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase OS=Mus musculus OX=10090 GN=Pip4p2 PE=1 SV=1" Q9CZX7 "Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase OS=Mus musculus OX=10090 GN=Pip4p2 PE=1 SV=1" 0 3 3 0.5138 0 1 1 1 453.57114 1358.69886 1358.69827 0.43 0.00019 0/0 0 0 23331272 HCD 30 MS2 28.06189 485.3 50.384 41.2122 10123 10123 10119 QEplus033719.raw F4 560.7 374.6 550.8 416.1 448.5 561.2 166 2.53 1 FALSE 0.005081 0.08759 0.041 -250 35687 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RIITTTR [K].rIITTTR.[S] N-Term(TMT6plex) 1 Q3U449 Uncharacterized protein OS=Mus musculus OX=10090 GN=Bpnt1 PE=2 SV=1 Q3U449 Uncharacterized protein OS=Mus musculus OX=10090 GN=Bpnt1 PE=2 SV=1 1 3 3 0.4562 0 1 1 1 363.90305 1089.69458 1089.69416 0.39 0.00014 0/0 0 0 12147487 HCD 30 MS2 25.9887 262.2 78.088 41.2145 10124 10124 10119 QEplus033719.raw F4 336.3 181.1 265.3 228 277.2 285.1 111 2.74 1 FALSE 0.001591 0.02446 0.248 -250 35705 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPSCQDCDTGYTR [R].gPScQDcDTGYTR.[V] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.9308 0 1 1 1 873.37488 1745.74248 1745.74205 0.25 0.00021 0/0 0 0 6078428 HCD 30 MS2 0 374.2 110 41.2195 10126 10126 10119 QEplus033719.raw F4 325.3 353.6 524.9 431.1 240.1 370.2 10 5.06 2 FALSE 1.14E-05 8.74E-09 1.628 -250 35710 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTVVSSQDPR [K].gTVVSSQDPR.[T] N-Term(TMT6plex) 2 Q3UHX9 Putative methyltransferase C9orf114 homolog OS=Mus musculus OX=10090 GN=Spout1 PE=1 SV=1 Q3UHX9; Q3UHX9-2 Putative methyltransferase C9orf114 homolog OS=Mus musculus OX=10090 GN=Spout1 PE=1 SV=1; Isoform 2 of Putative methyltransferase C9orf114 homolog OS=Mus musculus OX=10090 GN=Spout1 0 2 2 0.5213 0 1 1 1 637.84949 1274.6917 1274.69019 1.18 0.00075 0/0 0 0 3623763.5 HCD 30 MS2 0 206.8 110 41.222 10127 10127 10119 QEplus033719.raw F4 224.6 183.2 206.9 153.1 243.1 230.1 302 3.05 1 FALSE 1.14E-05 0.0001964 0.801 -250 35724 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAQVNVR [R].eAQVNVR.[M] N-Term(TMT6plex) 3 Q569Z6 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1 Q569Z6; Q91VL2; Q8BZN7 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Thrap3 protein (Fragment) OS=Mus musculus OX=10090 GN=Thrap3 PE=2 SV=1; Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1 0 2 2 0.3712 0 1 1 1 522.80267 1044.59807 1044.59992 -1.77 -0.00093 0/0 0 0 37495324 HCD 30 MS2 57.69474 837 18.782 41.2268 10129 10129 10119 QEplus033719.raw F4 970 612.5 857 541.3 1016.5 1024.5 350 2.29 1 FALSE 0.0006294 0.00962 0.411 -250 35730 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQFPAQSNR [K].nQFPAQSNR.[I] N-Term(TMT6plex) 1 Q3TLX9 Acid sphingomyelinase-like phosphodiesterase OS=Mus musculus OX=10090 GN=Smpdl3b PE=1 SV=1 Q3TLX9 Acid sphingomyelinase-like phosphodiesterase OS=Mus musculus OX=10090 GN=Smpdl3b PE=1 SV=1 0 2 2 0.4054 0 1 1 1 645.84113 1290.67497 1290.67521 -0.19 -0.00012 0/0 0 0 6158993 HCD 30 MS2 13.04291 319.1 110 41.2341 10131 10131 10130 QEplus033719.raw F4 306 279 384 287.7 283.4 374.5 239 2.59 1 FALSE 1.14E-05 6.86E-05 0.888 -250 35740 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTDISTER [K].tTDISTER.[L] N-Term(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.5185 0 1 1 1 576.3089 1151.61052 1151.61055 -0.02 -0.00001 0/0 0 0 9932612 HCD 30 MS2 26.47816 566.9 110 41.2366 10132 10132 10130 QEplus033719.raw F4 677.1 228.2 521.5 796.1 301.3 877.5 162 3.24 2 FALSE 1.14E-05 4.49E-05 0.923 -250 35746 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DHAVFTR [K].dHAVFTR.[R] N-Term(TMT6plex) 3 P63037 DnaJ homolog subfamily A member 1 OS=Mus musculus OX=10090 GN=Dnaja1 PE=1 SV=1 P63037; Q3TK61; B1AXY1 DnaJ homolog subfamily A member 1 OS=Mus musculus OX=10090 GN=Dnaja1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja1 PE=2 SV=1; DnaJ homolog subfamily A member 1 (Fragment) OS=Mus musculus OX=10090 GN=Dnaja1 PE=1 SV=1 0 3 3 0.6333 0 1 1 1 358.86798 1074.58939 1074.58936 0.03 0.00001 0/0 0 0 60377556 HCD 30 MS2 25.04253 209.3 17.538 41.2389 10133 10133 10130 QEplus033719.raw F4 256.7 157.8 248.2 168.1 217.4 207.8 290 3 1 FALSE 0.001343 0.01872 0.293 -250 35768 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDRYDAIR [R].gDRYDAIR.[A] N-Term(TMT6plex) 2 Q8C7R4 Ubiquitin-like modifier-activating enzyme 6 OS=Mus musculus OX=10090 GN=Uba6 PE=1 SV=1 Q8C7R4; D3Z061 Ubiquitin-like modifier-activating enzyme 6 OS=Mus musculus OX=10090 GN=Uba6 PE=1 SV=1; E1 ubiquitin-activating enzyme OS=Mus musculus OX=10090 GN=Uba6 PE=1 SV=1 1 3 3 0.3525 0 1 1 1 398.88614 1194.64386 1194.64285 0.85 0.00034 0/0 0 0 9019528 HCD 30 MS2 55.96544 602.3 71.286 41.2461 10136 10136 10130 QEplus033719.raw F4 602 538.8 725.1 543.8 565.5 638.6 254 2.78 1 FALSE 5.44E-05 0.002447 0.579 -250 35777 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEAVADPR [R].aEAVADPR.[AV] N-Term(TMT6plex) 1 D3YZV8 Coiled-coil domain-containing protein 8 homolog OS=Mus musculus OX=10090 GN=Ccdc8 PE=1 SV=2 D3YZV8 Coiled-coil domain-containing protein 8 homolog OS=Mus musculus OX=10090 GN=Ccdc8 PE=1 SV=2 0 2 2 0.3649 0 1 1 1 529.29791 1057.58855 1057.58394 4.36 0.0023 0/0 0 0 5341556 HCD 30 MS2 39.29963 605.3 110 41.2486 10137 10137 10130 QEplus033719.raw F4 754.9 455.8 562.3 419.7 782.6 656.5 145 2.11 1 FALSE 0.001567 0.02382 0.252 -250 35780 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YEEDSYNR [K].yEEDSYNR.[L] N-Term(TMT6plex) 5 Q4FJN9 Fdps protein OS=Mus musculus OX=10090 GN=Fdps PE=1 SV=1 Q3TMB3; Q3US29; Q4FJN9; Q5M8R9; A0A0G2JEA5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fdps PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fdps PE=2 SV=1; Fdps protein OS=Mus musculus OX=10090 GN=Fdps PE=1 SV=1; Farnesyl diphosphate synthetase OS=Mus musculus OX=10090 GN=Fdps PE=2 SV=1; Predicted gene 43738 OS=Mus musculus OX=10090 GN=Gm43738 PE=4 SV=1 0 2 2 0.8123 0 1 1 1 652.80157 1304.59587 1304.59563 0.19 0.00012 0/0 0 0 5161357.5 HCD 30 MS2 19.0374 334 110 41.2511 10138 10138 10130 QEplus033719.raw F4 357 305.2 376 306.4 314 345.6 23 2.77 1 FALSE 0.0002019 0.004162 0.523 -250 35785 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSRPEANEALER [K].nSRPEANEALER.[G] N-Term(TMT6plex) 1 Q9QYB1 Chloride intracellular channel protein 4 OS=Mus musculus OX=10090 GN=Clic4 PE=1 SV=3 Q9QYB1 Chloride intracellular channel protein 4 OS=Mus musculus OX=10090 GN=Clic4 PE=1 SV=3 0 2 2 0.6968 0 1 1 1 807.92328 1614.83928 1614.83971 -0.27 -0.00022 0/0 0 0 3098222 HCD 30 MS2 0 86.3 110 41.2537 10139 10139 10130 QEplus033719.raw F4 81.3 84.2 87.8 67.1 113.9 83.2 266 4.09 1 FALSE 1.14E-05 2.61E-06 1.158 -250 35798 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DANGNSFATR [K].dANGNSFATR.[L] N-Term(TMT6plex) 3 P62702 "40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2" Q545F8; P62702; Q3UXQ6 "40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1; 40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1" 0 2 2 0.4799 0 1 1 1 641.32294 1281.6386 1281.63849 0.08 0.00005 0/0 0 0 107946320 HCD 30 MS2 5.958098 464.7 16.685 41.2635 10142 10142 10141 QEplus033719.raw F4 486 391.4 527.6 410.3 438.3 534.5 134 3.48 1 FALSE 1.14E-05 6.05E-07 1.279 -250 35805 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATSTEPSNSASSSK [R].aTSTEPSNSASSSk.[S] N-Term(TMT6plex); K14(TMT6plex) 3 A0A0R4J078 UBX domain-containing protein 4 OS=Mus musculus OX=10090 GN=Ubxn4 PE=1 SV=1 Q6ZQF6; A0A0R4J078; Q8VCH8 MKIAA0242 protein (Fragment) OS=Mus musculus OX=10090 GN=Ubxn4 PE=2 SV=1; UBX domain-containing protein 4 OS=Mus musculus OX=10090 GN=Ubxn4 PE=1 SV=1; UBX domain-containing protein 4 OS=Mus musculus OX=10090 GN=Ubxn4 PE=1 SV=1 0 2 2 0.7129 0 1 1 1 906.47333 1811.93938 1811.93871 0.37 0.00034 0/0 0 0 6509324.5 HCD 30 MS2 0 236.9 110 41.266 10143 10143 10141 QEplus033719.raw F4 240.7 162.2 252.2 256.3 271.8 238 281 5.12 1 FALSE 1.14E-05 1.59E-15 2.908 -250 35827 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPSCQDCDTGYTR [R].gPScQDcDTGYTR.[V] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 3 3 0.8695 0 1 1 1 582.58606 1745.74363 1745.74205 0.9 0.00053 0/0 0 0 10606263 HCD 30 MS2 20.50937 234.1 110 41.273 10146 10146 10141 QEplus033719.raw F4 208.9 211.6 281 202.1 264 236.7 11 4.98 2 FALSE 1.14E-05 2.95E-06 1.148 -250 35833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQEVATNSNYR [K].sQEVATNSNYR.[Q] N-Term(TMT6plex) 5 A0A571BF58; Q61953 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1;Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1 E9Q1W3; A0A571BF58; Q61953; A0A571BF46; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 2 2 0.6821 0 1 1 1 749.37885 1497.75041 1497.7495 0.61 0.00046 0/0 0 0 4786933.5 HCD 30 MS2 0 205.9 110 41.2756 10147 10147 10141 QEplus033719.raw F4 246.2 91.5 211.9 281.3 118.7 285.6 179 3.68 2 FALSE 1.14E-05 4.82E-09 1.677 -250 35839 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRDFNEECPR [K].sRDFNEEcPR.[L] N-Term(TMT6plex); C8(Carbamidomethyl) 2 O55222 Integrin-linked protein kinase OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2 O55222; D3YZA5 Integrin-linked protein kinase OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2; Integrin-linked protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2 1 2 2 0.8141 0 1 1 1 769.86523 1538.72319 1538.72191 0.84 0.00064 0/0 0 0 2205770.25 HCD 30 MS2 0 49.1 110 41.2781 10148 10148 10141 QEplus033719.raw F4 50.7 46.6 53.9 36.7 53.1 53.7 61 3.82 1 FALSE 1.14E-05 0.0001886 0.804 -250 35858 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSLEGASNPR [R].qSLEGASNPR.[G] N-Term(TMT6plex) 6 O08715 "A-kinase anchor protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Akap1 PE=1 SV=4" O08715; O08715-3; O08715-6; O08715-5; O08715-4; O08715-2 "A-kinase anchor protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Akap1 PE=1 SV=4; Isoform 2 of A-kinase anchor protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Akap1; Isoform 6 of A-kinase anchor protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Akap1; Isoform 5 of A-kinase anchor protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Akap1; Isoform 4 of A-kinase anchor protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Akap1; Isoform 1 of A-kinase anchor protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Akap1" 0 2 2 0.6194 0 1 1 1 644.34607 1287.68486 1287.68544 -0.45 -0.00029 0/0 0 0 7175777 HCD 30 MS2 0 273.6 110 41.2856 10151 10151 10141 QEplus033719.raw F4 280 176.1 303.5 300.1 222.1 359.6 269 3.81 1 FALSE 1.14E-05 1.32E-07 1.404 -250 35866 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGCPPGNPTAGR [K].aGcPPGNPTAGR.[N] N-Term(TMT6plex); C3(Carbamidomethyl) 4 Q4FJZ4 T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1 Q4FJZ4; Q3UDG2; Q3U6U7; P32921 "T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; Tryptophan--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Wars1 PE=1 SV=2" 0 2 2 0.707 0 1 1 1 692.35413 1383.70098 1383.70005 0.67 0.00046 0/0 0 0 8685614 HCD 30 MS2 0 245.6 110 41.2929 10153 10153 10152 QEplus033719.raw F4 241.6 214.9 273.8 217.6 242.3 283.1 169 3.14 1 FALSE 1.14E-05 2.80E-07 1.342 -250 35875 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAATAIYR [K].rAATAIYR.[L] N-Term(TMT6plex) 4 Q64012-2 Isoform 1 of RNA-binding protein Raly OS=Mus musculus OX=10090 GN=Raly Q64012-2; A2AU60; A2AU61; Q3TGD3 Isoform 1 of RNA-binding protein Raly OS=Mus musculus OX=10090 GN=Raly; RNA-binding protein Raly (Fragment) OS=Mus musculus OX=10090 GN=Raly PE=1 SV=1; RNA-binding protein Raly (Fragment) OS=Mus musculus OX=10090 GN=Raly PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Raly PE=2 SV=1 1 3 3 0.2597 0 1 1 1 384.23373 1150.68665 1150.68941 -2.4 -0.00092 0/0 0 0 6064822.5 HCD 30 MS2 58.56144 503.6 110 41.2954 10154 10154 10152 QEplus033719.raw F4 765.2 335.8 499.3 396.2 544.3 480.8 228 3.35 1 FALSE 0.0003996 0.007018 0.458 -250 35901 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQTTATSR [R].lQTTATSR.[R] N-Term(TMT6plex) 4 Q3UHT6 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1 Q3UHT6; P19096; Q3TB22; A0A0U1RNJ1 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2; Fatty acid synthase (Fragment) OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=1 0 2 2 0.5185 0 1 1 1 553.8219 1106.63652 1106.6367 -0.16 -0.00009 0/0 0 0 25206914 HCD 30 MS2 36.8068 660.8 43.47 41.3022 10157 10157 10152 QEplus033719.raw F4 602.6 650.6 747.5 482 783.5 698.7 294 2.97 1 FALSE 1.14E-05 0.0001126 0.847 -250 35910 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTVQAR [R].vTVQAR.[V] N-Term(TMT6plex) 3 Q9D1K7 UPF0687 protein C20orf27 homolog OS=Mus musculus OX=10090 PE=1 SV=3 Q9D1K7; H7BXB9; F8WIU1 UPF0687 protein C20orf27 homolog OS=Mus musculus OX=10090 PE=1 SV=3; RIKEN cDNA 1700037H04 gene (Fragment) OS=Mus musculus OX=10090 GN=1700037H04Rik PE=1 SV=1; RIKEN cDNA 1700037H04 gene OS=Mus musculus OX=10090 GN=1700037H04Rik PE=1 SV=1 0 2 2 0.3093 0 1 1 1 451.78467 902.56206 902.56208 -0.02 -0.00001 0/0 0 0 20642858 HCD 30 MS2 38.55905 804.9 64.754 41.3044 10158 10158 10152 QEplus033719.raw F4 828.7 766.7 827.2 589.2 1041.6 775.7 102 1.94 1 FALSE 0.002749 0.05431 0.13 -250 35920 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAENFR [K].tAENFR.[AQ] N-Term(TMT6plex) 13 Q3UAJ1; Q9CR16; Q3UWH9 Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1;Peptidyl-prolyl cis-trans isomerase D OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=3;Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1 Q3UAJ1; Q9CR16; Q3UWH9; Q3UB60; Q5SVY2; Q99KR7; A2BGI9; Q9CZK9; Q9D868; A0A1L1SST0; Q4G0C5; A2BGI8; Q3UY37 "Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase D OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=3; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppid PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase F, mitochondrial OS=Mus musculus OX=10090 GN=Ppif PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase (Fragment) OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1" 0 2 2 0.1591 0 1 1 1 483.76404 966.5208 966.52061 0.2 0.00009 0/0 0 0 17025280 HCD 30 MS2 45.93558 946 110 41.3069 10159 10159 10152 QEplus033719.raw F4 975.8 792.5 997.8 780.3 1096 1033.4 87 1.76 3 FALSE 0.003674 0.07047 0.086 -250 35925 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMMAACDPR [K].nMmAAcDPR.[H] N-Term(TMT6plex); M3(Oxidation); C6(Carbamidomethyl) 14 Q7TMM9; P99024; P68372; Q9CWF2; Q3UMM1 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1;Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=1 SV=1 Q7TMM9; Q9D6F9; Q9CVR0; Q9ERD7; Q9CUN8; Q80ZV2; Q3U9U3; Q9CRT0; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2; Q3UMM1 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Tubulin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-3 chain OS=Mus musculus OX=10090 GN=Tubb3 PE=1 SV=1; Tubulin_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb6 PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=2 SV=1; Tubulin_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1; Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=1 SV=1 0 2 2 0.1854 0 1 1 1 655.79688 1310.58647 1310.58528 0.91 0.0006 0/0 0 0 6298418.5 HCD 30 MS2 0 261.8 110 41.3095 10160 10160 10152 QEplus033719.raw F4 285.7 206 315.6 210.8 264.5 288.2 18 1.78 5 FALSE 0.003381 0.06527 0.1 -250 35931 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECALQER [K].ecALQER.[V] N-Term(TMT6plex); C2(Carbamidomethyl) 1 A0A1D5RMM8 Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=2 A0A1D5RMM8 Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=2 0 2 2 0.5984 0 1 1 1 567.79218 1134.57707 1134.57747 -0.35 -0.0002 0/0 0 0 5110621 HCD 30 MS2 0 506.8 110 41.312 10161 10161 10152 QEplus033719.raw F4 559.6 361 578.3 500.2 451.1 590.7 128 2.44 1 FALSE 0.001615 0.02593 0.239 -250 35941 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGIPPDQQR [K].eGIPPDQQR.[LV] N-Term(TMT6plex) 18 P62984; P62983 Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2;Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2 E9Q5F6; P62984; Q922Z8; Q922B0; Q3TH47; Q5SX22; E9Q4P0; P62983; Q78XY9; E9Q9J0; Q8R0Z9; B0LAC2; Q8C2K3; Q8VC46; A5JUZ1; A0A0A6YW67; E9QNP0; P0CG50 Polyubiquitin-C (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=1; Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Polyubiquitin-B (Fragment) OS=Mus musculus OX=10090 GN=Ubb PE=4 SV=2; KxDL motif-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2; Ubiquitin B OS=Mus musculus OX=10090 GN=Ubb PE=2 SV=1; 60S ribosomal protein L40 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=3 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiquitin A-52 residue ribosomal protein fusion product 1 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubb-ps PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiqutin subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Predicted pseudogene 8797 OS=Mus musculus OX=10090 GN=Gm8797 PE=4 SV=1; 60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Polyubiquitin-C OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=2 0 2 2 0.6797 0 1 1 1 634.84656 1268.68584 1268.67963 4.89 0.0031 0/0 0 0 2684330 HCD 30 MS2 60.30186 247.5 110 41.3218 10164 10164 10163 QEplus033719.raw F4 272.4 195.2 258.7 186.9 312.2 259.5 283 2.81 2 FALSE 1.14E-05 3.71E-05 0.939 -250 35943 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAANEQLTR [R].aAANEQLTR.[A] N-Term(TMT6plex) 4 Q9D9P1 MICOS complex subunit Mic19 OS=Mus musculus OX=10090 GN=Chchd3 PE=1 SV=1 Q9D9P1; Q91VG6; Q9CRB9; D3Z0L4 MICOS complex subunit Mic19 OS=Mus musculus OX=10090 GN=Chchd3 PE=1 SV=1; Chchd3 protein (Fragment) OS=Mus musculus OX=10090 GN=Chchd3 PE=2 SV=1; MICOS complex subunit Mic19 OS=Mus musculus OX=10090 GN=Chchd3 PE=1 SV=1; MICOS complex subunit Mic19 (Fragment) OS=Mus musculus OX=10090 GN=Chchd3 PE=1 SV=1 0 2 2 0.4479 0 1 1 1 601.84021 1202.67314 1202.66907 3.39 0.00204 0/0 0 0 3247405.25 HCD 30 MS2 67.65189 389.2 110 41.3243 10165 10165 10163 QEplus033719.raw F4 432.3 301.1 418.5 354.5 389 439.7 319 2.88 1 FALSE 1.14E-05 2.81E-07 1.342 -250 35975 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRETIASVR [K].nRETIASVR.[S] N-Term(TMT6plex) 2 Q9D7M8 DNA-directed RNA polymerase II subunit RPB4 OS=Mus musculus OX=10090 GN=Polr2d PE=1 SV=2 Q9D7M8; A0A3Q4L2S8 DNA-directed RNA polymerase II subunit RPB4 OS=Mus musculus OX=10090 GN=Polr2d PE=1 SV=2; DNA-directed RNA polymerase II subunit RPB4 OS=Mus musculus OX=10090 GN=Polr2d PE=1 SV=1 1 3 3 0.5126 0 1 1 1 425.58438 1274.73859 1274.73781 0.61 0.00026 0/0 0 0 10841489 HCD 30 MS2 72.15369 959.1 110 41.3338 10169 10169 10163 QEplus033719.raw F4 960.8 858.9 1015.3 823.2 1112.1 984.6 489 3.57 1 FALSE 1.14E-05 2.22E-07 1.362 -250 35982 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEAGAAGPSGPAGPR [R].gEAGAAGPSGPAGPR.[G] N-Term(TMT6plex) 4 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.7421 0 1 1 1 740.8891 1480.77092 1480.77057 0.24 0.00018 0/0 0 0 5685383 HCD 30 MS2 0 163.4 110 41.3363 10170 10170 10163 QEplus033719.raw F4 160.3 123.7 181.1 173 170.6 171.6 242 4.73 1 FALSE 1.14E-05 7.91E-13 2.396 -250 35998 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHEGETAYIR [R].sHEGETAYIR.[V] N-Term(TMT6plex) 2 H7BX95 Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1 H7BX95; Q6PDM2 Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1; Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=3 0 2 2 0.6667 0 1 1 1 696.36017 1391.71306 1391.71166 1.01 0.0007 0/0 0 0 3108214.75 HCD 30 MS2 15.32461 232.1 110 41.3413 10172 10172 10163 QEplus033719.raw F4 225.9 243.5 238.6 223 270.5 191 227 3.84 1 FALSE 1.14E-05 1.01E-07 1.427 -250 36016 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDPSTPK [K].sDPSTPk.[G] N-Term(TMT6plex); K7(TMT6plex) 9 Q1PG84 PBK1 OS=Mus musculus domesticus OX=10092 GN=Rsl1d1 PE=2 SV=1 Q3TAJ5; Q1PG84; Q3TGI9; Q3TS64; Q3TLJ3; Q3TH37; Q3TN25; Q8BVY0; Q3UL54 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; PBK1 OS=Mus musculus domesticus OX=10092 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Ribosomal L1 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rsl1d1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1 0 2 2 0.2938 0 1 1 1 595.34546 1189.68364 1189.68287 0.65 0.00038 0/0 0 0 6877997.5 HCD 30 MS2 34.74354 470.2 110 41.3537 10176 10176 10174 QEplus033719.raw F4 607.1 331.4 546.1 361.3 487.6 487.9 423 1.94 1 FALSE 0.004808 0.08393 0.051 -250 36031 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQAEEAERR [R].lQAEEAERR.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.4989 0 1 1 1 444.2478 1330.72885 1330.72764 0.91 0.0004 0/0 0 0 76728096 HCD 30 MS2 20.01946 435.4 16.57 41.3582 10178 10178 10174 QEplus033719.raw F4 453.9 379.3 461 356 490.4 471.6 346 4.57 2 FALSE 1.14E-05 4.96E-08 1.485 -250 36040 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DFASESR [K].dFASESR.[V] N-Term(TMT6plex) 6 Q922R9 Trap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1 Q3TSG8; Q922R9; Q3UPJ8; Q9CQN1; Q3TK29; Q922Z3 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; Trap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; Heat shock protein 75 kDa, mitochondrial OS=Mus musculus OX=10090 GN=Trap1 PE=1 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; Trap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1" 0 2 2 0.2996 0 1 1 1 520.76471 1040.52214 1040.521 1.09 0.00057 0/0 0 0 59314652 HCD 30 MS2 5.293093 639.7 24.637 41.3604 10179 10179 10174 QEplus033719.raw F4 643.6 555 696.6 666.9 568.3 707.6 57 2.57 1 FALSE 0.001074 0.01377 0.348 -250 36047 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQAAELR [R].eQAAELR.[L] N-Term(TMT6plex) 1 Q8BJY1 26S proteasome non-ATPase regulatory subunit 5 OS=Mus musculus OX=10090 GN=Psmd5 PE=1 SV=4 Q8BJY1 26S proteasome non-ATPase regulatory subunit 5 OS=Mus musculus OX=10090 GN=Psmd5 PE=1 SV=4 0 2 2 0.2094 0 1 1 1 523.29407 1045.58086 1045.58394 -2.95 -0.00154 0/0 0 0 42457792 HCD 30 MS2 45.2795 556.9 13.435 41.3627 10180 10180 10174 QEplus033719.raw F4 613.2 440.4 564.8 415.2 664.8 643 256 2.34 1 FALSE 0.002654 0.05262 0.134 -250 36080 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTAGVMR [K].dTAGVMR.[S] N-Term(TMT6plex) 2 Q9DBR7 Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2 Q9DBR7; Q9DBR7-2 Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2; Isoform 2 of Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a 0 2 2 0.3503 0 1 1 1 489.76599 978.52471 978.52398 0.74 0.00036 0/0 0 0 32587694 HCD 30 MS2 58.91347 603.8 26.889 41.3792 10186 10186 10185 QEplus033719.raw F4 599.9 501.7 604.4 567.2 696.4 653.3 196 1.97 1 FALSE 0.001988 0.03508 0.193 -250 36099 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHEGETAYIR [R].sHEGETAYIR.[V] N-Term(TMT6plex) 2 H7BX95 Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1 H7BX95; Q6PDM2 Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1; Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=3 0 3 3 0.74 0 1 1 1 464.57663 1391.71534 1391.71166 2.64 0.00123 0/0 0 0 78072240 HCD 30 MS2 13.43873 211.2 15.43 41.3838 10188 10188 10185 QEplus033719.raw F4 214.8 195.7 213.8 197 267.7 177.9 230 4.73 1 FALSE 1.14E-05 1.76E-08 1.57 -250 36104 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAELNAR [R].eAELNAR.[A] N-Term(TMT6plex) 4 Q02819 Nucleobindin-1 OS=Mus musculus OX=10090 GN=Nucb1 PE=1 SV=2 A0A1C7CYU3; Q02819; A0A1B0GR41; Q8BRD3 Nucleobindin-1 OS=Mus musculus OX=10090 GN=Nucb1 PE=1 SV=1; Nucleobindin-1 OS=Mus musculus OX=10090 GN=Nucb1 PE=1 SV=2; Nucleobindin-1 (Fragment) OS=Mus musculus OX=10090 GN=Nucb1 PE=1 SV=1; Nucleobindin-1 OS=Mus musculus OX=10090 GN=Nucb1 PE=2 SV=1 0 2 2 0.3446 0 1 1 1 516.28815 1031.56902 1031.56829 0.71 0.00036 0/0 0 0 27730430 HCD 30 MS2 0 773.6 60.555 41.386 10189 10189 10185 QEplus033719.raw F4 795 676 784.2 644.2 952 790.1 205 2.67 1 FALSE 0.0003408 0.006526 0.468 -250 36112 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TATITAR [K].tATITAR.[T] N-Term(TMT6plex) 4 A2AN08 E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1 A2AN08-3; A2AN08-5; F6SSP6; A2AN08 Isoform 3 of E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4; Isoform 5 of E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4; E3 ubiquitin-protein ligase UBR4 (Fragment) OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1; E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1 0 2 2 0.3512 0 1 1 1 481.79498 962.58269 962.58321 -0.54 -0.00026 0/0 0 0 18427526 HCD 30 MS2 31.62803 660.6 61.672 41.3883 10190 10190 10185 QEplus033719.raw F4 725 518.5 691.3 586.4 697.5 744.8 72 2.42 1 FALSE 0.0023 0.04536 0.156 -250 36122 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYSVSTR [R].gYSVSTR.[I] N-Term(TMT6plex) 1 B2RXS4 Plexin-B2 OS=Mus musculus OX=10090 GN=Plxnb2 PE=1 SV=1 B2RXS4 Plexin-B2 OS=Mus musculus OX=10090 GN=Plxnb2 PE=1 SV=1 0 2 2 0.4853 0 1 1 1 499.77731 998.54735 998.54683 0.53 0.00026 0/0 0 0 15742582 HCD 30 MS2 50.03109 916.8 87.359 41.3905 10191 10191 10185 QEplus033719.raw F4 910.9 796 1021.5 729.3 1094.5 948.4 42 2.04 1 FALSE 0.003549 0.06817 0.092 -250 36128 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTIEHAR [R].vTIEHAR.[A] N-Term(TMT6plex) 3 O35326 Serine/arginine-rich splicing factor 5 OS=Mus musculus OX=10090 GN=Srsf5 PE=1 SV=2 O35326; Q5U448; Q9D8S5 Serine/arginine-rich splicing factor 5 OS=Mus musculus OX=10090 GN=Srsf5 PE=1 SV=2; Sfrs5 protein OS=Mus musculus OX=10090 GN=Srsf5 PE=2 SV=1; Serine/arginine-rich-splicing factor 5 OS=Mus musculus OX=10090 GN=Srsf5 PE=1 SV=1 0 2 2 0.6078 0 1 1 1 527.81488 1054.62248 1054.62066 1.73 0.00091 0/0 0 0 8142229 HCD 30 MS2 20.94225 593.8 110 41.393 10192 10192 10185 QEplus033719.raw F4 607.8 567.4 639.1 430.1 700.6 617.8 143 2.55 1 FALSE 0.0001603 0.003524 0.541 -250 36141 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSGAGPNQQRPGETQK [K].tSGAGPNQQRPGETQk.[S] N-Term(TMT6plex); K16(TMT6plex) 2 E9Q446 E3 ubiquitin-protein ligase RNF25 OS=Mus musculus OX=10090 GN=Rnf25 PE=1 SV=1 E9Q446; Q9QZR0 E3 ubiquitin-protein ligase RNF25 OS=Mus musculus OX=10090 GN=Rnf25 PE=1 SV=1; E3 ubiquitin-protein ligase RNF25 OS=Mus musculus OX=10090 GN=Rnf25 PE=1 SV=2 0 3 3 0.5987 0 1 1 1 705.38507 2114.14066 2114.13545 2.46 0.00174 0/0 0 0 2436232.5 HCD 30 MS2 0 196.8 110 41.3981 10194 10194 10185 QEplus033719.raw F4 209.7 165.8 200.1 154.2 235.6 215.2 414 3.04 1 FALSE 1.14E-05 1.60E-08 1.578 -250 36164 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DHNVEFR [R].dHNVEFR.[S] N-Term(TMT6plex) 1 Q8BU88 "39S ribosomal protein L22, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl22 PE=1 SV=1" Q8BU88 "39S ribosomal protein L22, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl22 PE=1 SV=1" 0 3 3 0.5681 0 1 1 1 382.53448 1145.5889 1145.59009 -1.04 -0.0004 0/0 0 0 17072256 HCD 30 MS2 61.89343 350.6 51.071 41.4099 10198 10198 10196 QEplus033719.raw F4 406.8 261.3 370.8 314.6 397.2 352.7 88 3.01 1 FALSE 0.001877 0.03162 0.209 -250 36179 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KEAEDNLRR [K].kEAEDNLRR.[E] N-Term(TMT6plex); K1(TMT6plex) 6 A0A498WGK2 Asparagine--tRNA ligase OS=Mus musculus OX=10090 GN=Nars PE=1 SV=1 A0A498WGK2; A0A494B996; Q8BP47; A0A494BB89; A0A494BAW6; A0A494B927 "Asparagine--tRNA ligase OS=Mus musculus OX=10090 GN=Nars PE=1 SV=1; Asparaginyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Nars PE=1 SV=1; Asparagine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=NARS1 PE=1 SV=2; Asparaginyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Nars PE=1 SV=1; Asparaginyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Nars PE=1 SV=1; Asparaginyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Nars PE=1 SV=1" 2 4 4 0.4264 0 1 1 1 397.98489 1588.91775 1588.91712 0.39 0.00016 0/0 0 0 31861870 HCD 30 MS2 24.37169 819 57.107 41.4166 10201 10201 10196 QEplus033719.raw F4 920.3 613.3 809.9 738.9 949.8 882 517 3.26 1 FALSE 1.14E-05 2.58E-05 0.969 -250 36192 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NGDTMEYR [R].nGDTMEYR.[K] N-Term(TMT6plex) 4 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; A2AIM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Talin-1 (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.4425 0 1 1 1 607.78735 1214.56743 1214.5673 0.11 0.00006 0/0 0 0 8502582 HCD 30 MS2 11.32896 509 110 41.4216 10203 10203 10196 QEplus033719.raw F4 532.5 459.9 549.5 406.1 617.3 488.9 28 2.87 1 FALSE 0.0001504 0.0033 0.548 -250 36204 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SERPGPGGGVCEPR [R].sERPGPGGGVcEPR.[G] N-Term(TMT6plex); C11(Carbamidomethyl) 2 Q9JM58 Cytokine receptor-like factor 1 OS=Mus musculus OX=10090 GN=Crlf1 PE=1 SV=1 Q9JM58; F6T1W4 Cytokine receptor-like factor 1 OS=Mus musculus OX=10090 GN=Crlf1 PE=1 SV=1; Cytokine receptor-like factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Crlf1 PE=1 SV=1 0 3 3 0.6983 0 1 1 1 561.95221 1683.84208 1683.84342 -0.8 -0.00045 0/0 0 0 4181595 HCD 30 MS2 26.91745 357.4 110 41.4264 10205 10205 10196 QEplus033719.raw F4 396.6 299.6 383.8 264.5 413.8 385.9 192 3.58 1 FALSE 1.14E-05 9.80E-08 1.429 -250 36226 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGQEFAR [K].aGQEFAR.[N] N-Term(TMT6plex) 2 Q9JHP7 Protein O-glucosyltransferase 2 OS=Mus musculus OX=10090 GN=Poglut2 PE=1 SV=1 Q9JHP7-2; Q9JHP7 Isoform 2 of Protein O-glucosyltransferase 2 OS=Mus musculus OX=10090 GN=Poglut2; Protein O-glucosyltransferase 2 OS=Mus musculus OX=10090 GN=Poglut2 PE=1 SV=1 0 2 2 0.3917 0 1 1 1 504.27704 1007.5468 1007.54716 -0.36 -0.00018 0/0 0 0 17483438 HCD 30 MS2 27.92064 1191.4 110 41.4384 10209 10209 10207 QEplus033719.raw F4 1235.3 914.1 1243.9 1226.1 1219.2 1309.7 150 2.17 1 FALSE 0.0005944 0.008824 0.424 -250 36252 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPHVGDYR [K].qPHVGDYR.[Q] N-Term(TMT6plex) 4 P97371 Proteasome activator complex subunit 1 OS=Mus musculus OX=10090 GN=Psme1 PE=1 SV=2 P97371; G3X9K9; G3UXY0; G3UXZ5 Proteasome activator complex subunit 1 OS=Mus musculus OX=10090 GN=Psme1 PE=1 SV=2; Proteasome activator complex subunit 1 OS=Mus musculus OX=10090 GN=Psme1 PE=1 SV=1; Proteasome activator complex subunit 1 OS=Mus musculus OX=10090 GN=Psme1 PE=1 SV=1; Proteasome activator complex subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psme1 PE=1 SV=1 0 3 3 0.4882 0 1 1 1 400.88266 1200.63343 1200.63229 0.95 0.00038 0/0 0 0 10524957 HCD 30 MS2 44.23449 495.4 97.123 41.4522 10215 10215 10207 QEplus033719.raw F4 527 394.6 475.4 412.8 652.1 510.7 133 3.38 1 FALSE 0.0001707 0.003891 0.53 -250 36266 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSNAEPEPR [R].vSNAEPEPR.[S] N-Term(TMT6plex) 5 B7ZC46 Septin OS=Mus musculus OX=10090 GN=Septin8 PE=1 SV=1 Q8CHH9-2; B7ZC46; Q8CHH9; B1AQZ0; B1AQY9 Isoform 2 of Septin-8 OS=Mus musculus OX=10090 GN=Septin8; Septin OS=Mus musculus OX=10090 GN=Septin8 PE=1 SV=1; Septin-8 OS=Mus musculus OX=10090 GN=Septin8 PE=1 SV=4; Septin-8 OS=Mus musculus OX=10090 GN=Septin8 PE=1 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin8 PE=1 SV=1 0 2 2 0.6097 0 1 1 1 614.33087 1227.65447 1227.65308 1.13 0.00069 0/0 0 0 14289603 HCD 30 MS2 0 354.6 110 41.4645 10219 10219 10218 QEplus033719.raw F4 381 328.9 387 298.3 388.3 344.4 216 3.1 1 FALSE 1.14E-05 1.65E-05 1.006 -250 36273 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FQDDDQTR [K].fQDDDQTR.[V] N-Term(TMT6plex) 2 Q5U458 DnaJ homolog subfamily C member 11 OS=Mus musculus OX=10090 GN=Dnajc11 PE=1 SV=2 Q5U458; E9Q8B3 DnaJ homolog subfamily C member 11 OS=Mus musculus OX=10090 GN=Dnajc11 PE=1 SV=2; DnaJ homolog subfamily C member 11 OS=Mus musculus OX=10090 GN=Dnajc11 PE=1 SV=1 0 2 2 0.3711 0 1 1 1 627.302 1253.59673 1253.59596 0.61 0.00038 0/0 0 0 7787400.5 HCD 30 MS2 39.57153 392.4 110 41.467 10220 10220 10218 QEplus033719.raw F4 389.3 295.2 470.1 354.9 367.7 477.2 62 2.91 1 FALSE 0.0008183 0.01121 0.385 -250 36286 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGDPGDAAQQEAK [K].hGDPGDAAQQEAk.[Q] N-Term(TMT6plex); K13(TMT6plex) 1 Q564F6 Programmed cell death 5 OS=Mus musculus OX=10090 GN=Pdcd5 PE=1 SV=1 Q564F6 Programmed cell death 5 OS=Mus musculus OX=10090 GN=Pdcd5 PE=1 SV=1 0 3 3 0.8296 0 1 1 1 594.64441 1781.91867 1781.91825 0.24 0.00014 0/0 0 0 32581340 HCD 30 MS2 8.508009 317.2 43.271 41.4715 10222 10222 10218 QEplus033719.raw F4 336.5 254.2 334.6 280.6 335.6 361.4 278 4.46 1 FALSE 1.14E-05 5.55E-13 2.425 -250 36303 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MREQQALSR [K].mREQQALSR.[E] N-Term(TMT6plex) 1 Q8K297 Procollagen galactosyltransferase 1 OS=Mus musculus OX=10090 GN=Colgalt1 PE=1 SV=2 Q8K297 Procollagen galactosyltransferase 1 OS=Mus musculus OX=10090 GN=Colgalt1 PE=1 SV=2 1 3 3 0.4653 0 1 1 1 449.9187 1347.74155 1347.73643 3.8 0.00171 0/0 0 0 19802050 HCD 30 MS2 36.62225 470.5 35.131 41.4783 10225 10225 10218 QEplus033719.raw F4 482.7 389.5 536 414.6 459.8 540.4 406 4.04 1 FALSE 1.14E-05 1.12E-06 1.228 -250 36313 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSADNTVGR [K].vSADNTVGR.[F] N-Term(TMT6plex) 5 Q6IRT4 Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=2 SV=1 Q8VH52; Q6IRT4; Q9DCH4; Q8BTW2; Q3U8X1 Translation initiation factor-3 subunit 5 (Fragment) OS=Mus musculus OX=10090 GN=Eif3f PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=1 SV=2; Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=2 SV=1 0 2 2 0.6375 0 1 1 1 574.31714 1147.627 1147.62687 0.12 0.00007 0/0 0 0 15506741 HCD 30 MS2 0 791.1 110 41.4808 10226 10226 10218 QEplus033719.raw F4 863.4 649.7 853.5 612.9 889.7 877.1 288 3.31 1 FALSE 1.14E-05 1.57E-06 1.2 -250 36322 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSSINSR [K].vSSINSR.[F] N-Term(TMT6plex) 2 A0A1S7D812 Exosome complex component CSL4 short isoform (Fragment) OS=Mus musculus OX=10090 GN=Exosc1 PE=2 SV=1 A0A1S7D812; Q9DAA6 Exosome complex component CSL4 short isoform (Fragment) OS=Mus musculus OX=10090 GN=Exosc1 PE=2 SV=1; Exosome complex component CSL4 OS=Mus musculus OX=10090 GN=Exosc1 PE=1 SV=1 0 2 2 0.4236 0 1 1 1 496.28973 991.57219 991.57337 -1.19 -0.00059 0/0 0 0 4784733 HCD 30 MS2 28.63307 646.7 110 41.4833 10227 10227 10218 QEplus033719.raw F4 710.1 511.1 637.4 587.3 719.9 714.6 170 2.03 1 FALSE 0.001351 0.01914 0.289 -250 36332 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQAVDYDGSR [K].gQAVDYDGSR.[T] N-Term(TMT6plex) 2 A0A0R4J0Z1 Protein disulfide-isomerase A4 OS=Mus musculus OX=10090 GN=Pdia4 PE=1 SV=1 A0A0R4J0Z1; P08003 Protein disulfide-isomerase A4 OS=Mus musculus OX=10090 GN=Pdia4 PE=1 SV=1; Protein disulfide-isomerase A4 OS=Mus musculus OX=10090 GN=Pdia4 PE=1 SV=3 0 2 2 0.7452 0 1 1 1 648.82275 1296.63823 1296.63816 0.06 0.00004 0/0 0 0 4052210 HCD 30 MS2 20.52877 464.4 110 41.4858 10228 10228 10218 QEplus033719.raw F4 459.5 451.1 517.1 352.8 571.9 433.7 118 3.61 1 FALSE 1.14E-05 1.59E-07 1.389 -250 36352 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVANSRPAK [R].aVANSRPAk.[A] N-Term(TMT6plex); K9(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 3 3 0.5743 0 1 1 1 457.95474 1371.84967 1371.84725 1.76 0.00081 0/0 0 0 16324064 HCD 30 MS2 27.17731 955.7 84.478 41.5047 10235 10235 10229 QEplus033719.raw F4 1679.2 547.3 1039.8 924.8 624.1 919 263 3.03 1 FALSE 1.14E-05 0.0002464 0.782 -250 36367 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGEPEQEAVSR [R].tGEPEQEAVSR.[T] N-Term(TMT6plex) 3 Q62418 Drebrin-like protein OS=Mus musculus OX=10090 GN=Dbnl PE=1 SV=2 Q62418; Q62418-2; Q62418-3 Drebrin-like protein OS=Mus musculus OX=10090 GN=Dbnl PE=1 SV=2; Isoform 2 of Drebrin-like protein OS=Mus musculus OX=10090 GN=Dbnl; Isoform 3 of Drebrin-like protein OS=Mus musculus OX=10090 GN=Dbnl 0 2 2 0.6992 0 1 1 1 716.36786 1431.72844 1431.7277 0.52 0.00037 0/0 0 0 11700703 HCD 30 MS2 5.465042 298.6 110 41.5097 10237 10237 10229 QEplus033719.raw F4 305.4 253.8 330.1 252.7 359.5 290 190 3.99 1 FALSE 1.14E-05 3.67E-09 1.7 -250 36377 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIGENETDER [R].qIGENETDER.[F] N-Term(TMT6plex) 6 A0A1L1SQ51 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1 Q71LX4; Q68FD6; A0A1L1SQ51; B2RY15; E9PUM4; Q3TN69 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=3; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1 0 2 2 0.7043 0 1 1 1 710.34894 1419.6906 1419.69132 -0.51 -0.00036 0/0 0 0 6433306.5 HCD 30 MS2 0 247.7 110 41.5145 10239 10239 10229 QEplus033719.raw F4 274.4 178.6 243.3 261.8 302.7 225.1 97 3.99 1 FALSE 1.14E-05 3.49E-08 1.514 -250 36386 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPPPPPGDENR [R].gPPPPPGDENR.[E] N-Term(TMT6plex) 7 Q80W39 "Splicing factor 3b, subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1" Q80W39; Q3UAI4; Q3UBH2; Q9CS24; Q3UQU5; A0A494B9S9; Q3UJB0 "Splicing factor 3b, subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; SAP domain-containing protein OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; SAP domain-containing protein OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; SAP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; SAP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; Splicing factor 3b, subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Sf3b2 PE=1 SV=1; Splicing factor 3b, subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=1 SV=1" 0 2 2 0.7 0 1 1 1 681.35474 1361.7022 1361.70109 0.81 0.00055 0/0 0 0 3453483 HCD 30 MS2 0 180.4 110 41.5243 10242 10242 10240 QEplus033719.raw F4 190.7 161.8 193.4 132.3 218.7 185.6 191 3.7 1 FALSE 1.14E-05 7.52E-07 1.261 -250 36393 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLDNPAR [K].qLDNPAR.[I] N-Term(TMT6plex) 4 P56399 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 P56399; Q3U4W8; D3Z4K7; D3YYA5 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase 5 (Fragment) OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=8; Ubiquitin carboxyl-terminal hydrolase 5 (Fragment) OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 0 2 2 0.2115 0 1 1 1 521.79614 1042.58501 1042.58427 0.7 0.00037 0/0 0 0 27979510 HCD 30 MS2 32.33109 848.7 66.98 41.5266 10243 10243 10240 QEplus033719.raw F4 949 675.2 893.7 683.9 924.9 965.6 85 2.6 1 FALSE 0.0004492 0.007531 0.448 -250 36403 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPNASEPK [K].nPNASEPk.[H] N-Term(TMT6plex); K8(TMT6plex) 4 Q8VDN2 Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1 Q3TXF9; Q8VDN2; Q3UCH8; Q8R3M4 Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1 0 2 2 0.3923 0 1 1 1 657.87512 1314.74297 1314.74179 0.9 0.00059 0/0 0 0 13837364 HCD 30 MS2 30.05952 613.6 110 41.5336 10246 10246 10240 QEplus033719.raw F4 717.5 460.6 712.1 612.7 581 597.6 339 2.6 1 FALSE 1.14E-05 0.00015 0.823 -250 36412 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLQGQLQGGSR [K].rLQGQLQGGSR.[E] N-Term(TMT6plex) 1 Q8C0L8 Conserved oligomeric Golgi complex subunit 5 OS=Mus musculus OX=10090 GN=Cog5 PE=1 SV=3 Q8C0L8 Conserved oligomeric Golgi complex subunit 5 OS=Mus musculus OX=10090 GN=Cog5 PE=1 SV=3 1 3 3 0.1639 0 1 1 1 476.94507 1428.82065 1428.82327 -1.84 -0.00087 0/0 0 0 8018456 HCD 30 MS2 60.47341 717.9 110 41.5361 10247 10247 10240 QEplus033719.raw F4 822 566.8 715.1 573.2 837.2 793 386 1.83 1 FALSE 0.009892 0.1943 -0.129 -250 36419 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQPQNQNIPR [K].sQPQNQNIPR.[G] N-Term(TMT6plex) 7 A0A1Z3MI45 Ifi204 OS=Mus musculus domesticus OX=10092 GN=Ifi204 PE=3 SV=1 A0A1Z3MHX2; P0DOV1; Q8CGE8; A0A1Z3MI45; P0DOV1-2; A0A1Z3MI21; P0DOV2 MndaL OS=Mus musculus domesticus OX=10092 GN=Mndal PE=3 SV=1; Interferon-activable protein 205-B OS=Mus musculus OX=10090 GN=Mnda PE=1 SV=1; Interferon-activable protein 205-A OS=Mus musculus OX=10090 GN=Ifi205a PE=2 SV=1; Ifi204 OS=Mus musculus domesticus OX=10092 GN=Ifi204 PE=3 SV=1; Isoform 2 of Interferon-activable protein 205-B OS=Mus musculus OX=10090 GN=Mnda; Ifi205 OS=Mus musculus domesticus OX=10092 GN=Ifi205 PE=3 SV=1; Interferon-activable protein 204 OS=Mus musculus OX=10090 GN=Ifi204 PE=1 SV=1 0 2 2 0.5722 0 1 1 1 705.88611 1410.76494 1410.76509 -0.11 -0.00008 0/0 0 0 5740070 HCD 30 MS2 14.05638 289.1 110 41.5386 10248 10248 10240 QEplus033719.raw F4 290.8 289.8 302.6 212.5 353.3 285.8 353 3.53 1 FALSE 1.14E-05 1.81E-05 0.999 -250 36425 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FSAQSQAR [R].fSAQSQAR.[E] N-Term(TMT6plex) 3 D6RFQ2 Predicted gene 42957 OS=Mus musculus OX=10090 GN=Gm42957 PE=1 SV=1 D6RFQ2; Q9Z210; D6RFR1 Predicted gene 42957 OS=Mus musculus OX=10090 GN=Gm42957 PE=1 SV=1; Peroxisomal membrane protein 11B OS=Mus musculus OX=10090 GN=Pex11b PE=1 SV=1; Peroxisomal membrane protein 11B OS=Mus musculus OX=10090 GN=Pex11b PE=4 SV=1 0 2 2 0.4585 0 1 1 1 562.30603 1123.60478 1123.60574 -0.85 -0.00048 0/0 0 0 5330518 HCD 30 MS2 43.46431 515.2 110 41.5411 10249 10249 10240 QEplus033719.raw F4 514.6 456.4 589.2 410.2 592.3 528.5 241 2.29 1 FALSE 0.0003408 0.006564 0.467 -250 36431 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLRPLER [R].hLRPLER.[Y] N-Term(TMT6plex) 5 Q8C0E3 E3 ubiquitin-protein ligase TRIM47 OS=Mus musculus OX=10090 GN=Trim47 PE=1 SV=2 Q8C0E3-2; B7ZN75; Q8C0E3; Q497Z1; A3KMJ7 Isoform 2 of E3 ubiquitin-protein ligase TRIM47 OS=Mus musculus OX=10090 GN=Trim47; Trim47 protein OS=Mus musculus OX=10090 GN=Trim47 PE=2 SV=1; E3 ubiquitin-protein ligase TRIM47 OS=Mus musculus OX=10090 GN=Trim47 PE=1 SV=2; Trim47 protein (Fragment) OS=Mus musculus OX=10090 GN=Trim47 PE=2 SV=1; Tripartite motif-containing 47 OS=Mus musculus OX=10090 GN=Trim47 PE=2 SV=1 0 3 3 0.1436 0 1 1 2 383.9071 1149.70676 1149.70539 1.19 0.00046 0/0 0 0 4937101 HCD 30 MS2 34.06789 435.1 110 41.5436 10250 10250 10240 QEplus033719.raw F4 718.1 311.6 442.6 310.6 372.5 455.1 220 2.02 1 FALSE 0.003405 0.06612 0.098 -250 36449 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAAGLGDGGGGGER [R].aAAGLGDGGGGGER.[A] N-Term(TMT6plex) 1 Q8BIJ7 RUN and FYVE domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rufy1 PE=1 SV=1 Q8BIJ7 RUN and FYVE domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rufy1 PE=1 SV=1 0 2 2 0.7733 0 1 1 1 687.35229 1373.69731 1373.69707 0.18 0.00012 0/0 0 0 4834971 HCD 30 MS2 11.65437 205.1 110 41.5534 10253 10253 10251 QEplus033719.raw F4 237.3 171.9 233.4 174.2 195.8 218.2 123 4.5 1 FALSE 1.14E-05 1.23E-15 2.929 -250 36460 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTGDDSMR [R].vTGDDSMR.[M] N-Term(TMT6plex) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9; F7AVL7 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.7231 0 1 1 1 555.27679 1109.54631 1109.54584 0.43 0.00024 0/0 0 0 51595168 HCD 30 MS2 6.241144 700.5 30.536 41.5579 10255 10255 10251 QEplus033719.raw F4 705.5 738.9 673 425.5 1082.2 578 84 3.07 1 FALSE 1.14E-05 0.0003853 0.744 -250 36465 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DADSQNPDAPEGKR [K].dADSQNPDAPEGkR.[S] N-Term(TMT6plex); K13(TMT6plex) 4 Q8CIE6 Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2 Q63ZW9; Q8CIE6; F8WHL2; Q8BTF0 Copa protein (Fragment) OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1 1 3 3 0.8055 0 1 1 1 653.33789 1957.99912 1957.99795 0.6 0.00039 0/0 0 0 15986904 HCD 30 MS2 40.9324 590.3 103.705 41.5603 10256 10256 10251 QEplus033719.raw F4 570 615.9 694.6 527.7 602.8 530.5 264 4.73 1 FALSE 1.14E-05 3.96E-13 2.453 -250 36471 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETCGCCDCEK [R].eTcGccDcEk.[R] N-Term(TMT6plex); C3(Carbamidomethyl); C5(Carbamidomethyl); C6(Carbamidomethyl); C8(Carbamidomethyl); K10(TMT6plex) 2 Q02788 Collagen alpha-2(VI) chain OS=Mus musculus OX=10090 GN=Col6a2 PE=1 SV=3 Q02788; D3Z7D5 Collagen alpha-2(VI) chain OS=Mus musculus OX=10090 GN=Col6a2 PE=1 SV=3; Collagen alpha-2(VI) chain OS=Mus musculus OX=10090 GN=Col6a2 PE=1 SV=1 0 2 2 0.7626 0 1 1 1 888.8761 1776.74492 1776.74253 1.34 0.00119 0/0 0 0 3486255.25 HCD 30 MS2 13.51509 405.6 110 41.5629 10257 10257 10251 QEplus033719.raw F4 422.4 396.7 398.6 347.7 543.9 324 7 3.96 1 FALSE 1.14E-05 1.15E-06 1.226 -250 36478 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CSASTTDLR [K].cSASTTDLR.[V] N-Term(TMT6plex); C1(Carbamidomethyl) 3 Q3UQN2 F-BAR domain only protein 2 OS=Mus musculus OX=10090 GN=Fcho2 PE=1 SV=1 Q3TPU3; Q3TTY1; Q3UQN2 MHD domain-containing protein OS=Mus musculus OX=10090 GN=Fcho2 PE=2 SV=1; MHD domain-containing protein OS=Mus musculus OX=10090 GN=Fcho2 PE=2 SV=1; F-BAR domain only protein 2 OS=Mus musculus OX=10090 GN=Fcho2 PE=1 SV=1 0 2 2 0.5839 0 1 1 1 620.3136 1239.61992 1239.62007 -0.12 -0.00007 0/0 0 0 2292444.25 HCD 30 MS2 0 194.4 110 41.5654 10258 10258 10251 QEplus033719.raw F4 214.2 154.2 193.3 172.6 216.5 215.4 119 2.74 1 FALSE 1.14E-05 0.0003087 0.763 -250 36487 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVEQER [K].iVEQER.[A] N-Term(TMT6plex) 3 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 E9Q7G0; Q3UNM2; F6ZQA3 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=2 SV=1; Nuclear mitotic apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 0 2 2 0.1491 0 1 1 1 501.79279 1002.57829 1002.57813 0.17 0.00008 0/0 0 0 20026178 HCD 30 MS2 31.37677 869.2 83.037 41.5676 10259 10259 10251 QEplus033719.raw F4 878.9 830.9 869.8 677.5 1198.3 759.7 273 2.28 1 FALSE 0.002056 0.03695 0.186 -250 36495 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSEDTNPESK [K].qSEDTNPESk.[E] N-Term(TMT6plex); K10(TMT6plex) 4 Q5SUF2 Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1 F7A7G1; Q5SUF2-2; Q5SUF2-3; Q5SUF2 Luc7-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1; Isoform 2 of Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3; Isoform 3 of Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3; Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1 0 2 2 0.7455 0 1 1 1 796.91254 1592.8178 1592.8168 0.63 0.0005 0/0 0 0 6236085.5 HCD 30 MS2 0 259.2 110 41.5702 10260 10260 10251 QEplus033719.raw F4 271.8 236.3 253.6 191.8 373.1 228.3 188 3.85 1 FALSE 1.14E-05 2.67E-08 1.536 -250 36517 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQGREDENDDEDGDSGEYR [R].vQGREDENDDEDGDSGEYR.[H] N-Term(TMT6plex) 4 Q9QZV4 Histidine-rich Ca2+ binding protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1 Q9QZV4; Q9WVE4; G5E8J6; B9EIW1 Histidine-rich Ca2+ binding protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1; Histidine-rich calcium-binding protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1; Histidine-rich calcium-binding protein OS=Mus musculus OX=10090 GN=Hrc PE=1 SV=1; Hrc protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1 1 3 3 0.8761 0 1 1 1 805.3454 2414.02164 2414.01775 1.61 0.0013 0/0 0 0 2513919.75 HCD 30 MS2 36.873 65.6 110 41.5825 10264 10264 10262 QEplus033719.raw F4 66.9 20.2 73 90.8 35.3 107.4 5 5.65 1 FALSE 1.14E-05 7.93E-16 2.966 -250 36532 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQITAGNAAR [K].dQITAGNAAR.[K] N-Term(TMT6plex) 3 Q9DCL9 Multifunctional protein ADE2 OS=Mus musculus OX=10090 GN=Paics PE=1 SV=4 Q9DCL9; D3Z6P1; D6RCU8 Multifunctional protein ADE2 OS=Mus musculus OX=10090 GN=Paics PE=1 SV=4; Phosphoribosylaminoimidazolesuccinocarboxamide synthase (Fragment) OS=Mus musculus OX=10090 GN=Paics PE=1 SV=1; Phosphoribosylaminoimidazolesuccinocarboxamide synthase OS=Mus musculus OX=10090 GN=Paics PE=1 SV=1 0 2 2 0.605 0 1 1 1 623.34143 1245.67558 1245.67488 0.57 0.00035 0/0 0 0 47135424 HCD 30 MS2 0 668.8 48.301 41.5893 10267 10267 10262 QEplus033719.raw F4 685.5 732.7 708 387.3 925.5 574.1 323 3.62 1 FALSE 1.14E-05 4.41E-08 1.495 -250 36544 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLATQATR [K].tLATQATR.[R] N-Term(TMT6plex) 2 A0A0R4J0T8 ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Arfgap3 PE=1 SV=1 A0A0R4J0T8; Q9D8S3 ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Arfgap3 PE=1 SV=1; ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Arfgap3 PE=1 SV=2 0 2 2 0.4621 0 1 1 1 545.82495 1090.64263 1090.64179 0.77 0.00042 0/0 0 0 26955910 HCD 30 MS2 26.3826 685.2 48.9 41.5939 10269 10269 10262 QEplus033719.raw F4 735.5 572 723.5 541.1 814.6 724.7 262 2.64 1 FALSE 1.14E-05 0.000189 0.804 -250 36560 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLESAEERR [K].dLESAEERR.[E] N-Term(TMT6plex) 4 Q3ULJ5 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 Q3ULJ5; Q3U5M8; P14685; Q8BK46 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus OX=10090 GN=Psmd3 PE=1 SV=3; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 1 3 3 0.5983 0 1 1 1 445.23553 1333.69205 1333.69092 0.85 0.00038 0/0 0 0 16292318 HCD 30 MS2 35.47177 686.8 74.412 41.5984 10271 10271 10262 QEplus033719.raw F4 734.3 541.5 744.6 631.1 734.7 734.5 232 4.68 1 FALSE 1.14E-05 8.14E-07 1.254 -250 36569 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDYGPPGR [R].gDYGPPGR.[E] N-Term(TMT6plex) 4 Q6NVF9 Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1 H3BKW0; Q6NVF9; H3BJ30; H3BJW3 Cleavage and polyadenylation-specificity factor subunit 6 (Fragment) OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1; Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1; Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1; Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1 0 2 2 0.1653 0 1 1 1 524.27509 1047.54289 1047.54207 0.78 0.00041 0/0 0 0 9850010 HCD 30 MS2 37.12004 740.4 110 41.6009 10272 10272 10262 QEplus033719.raw F4 743.5 615.9 801 591.7 859.6 830.4 163 2.36 1 FALSE 1.14E-05 0.0001127 0.847 -250 36576 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADDANVVRDR [R].aDDANVVRDR.[D] N-Term(TMT6plex) 4 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087; Q60785; Q99LL6 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4; Alpha-1 type I procollagen (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1; Col1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1 1 3 3 0.5862 0 1 1 1 453.91129 1359.7193 1359.71781 1.1 0.0005 0/0 0 0 20733342 HCD 30 MS2 33.93832 558.2 61.25 41.6104 10275 10275 10273 QEplus033719.raw F4 626.1 440.5 609.3 414.6 632.6 626 266 3.77 1 FALSE 0.0008805 0.01229 0.369 -250 36588 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTTEDPAR [R].vTTEDPAR.[S] N-Term(TMT6plex) 8 G5E8R3 Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=1 SV=1 G5E8R3; Q3UFS6; Q05920; Q3TCQ3; Q8BP54; Q3T9S7; E9QPD7; Q62043 "Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=1 SV=1; Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1; Pyruvate carboxylase, mitochondrial OS=Mus musculus OX=10090 GN=Pc PE=1 SV=1; Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1; Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1; Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=1 SV=1; Pyruvate carboxylase (Fragment) OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1" 0 2 2 0.042 2 2 2 559.31128 1117.61528 1117.60507 9.14 0.00511 0/0 0 0 15843757 HCD 30 MS2 34.58136 726.9 96.579 41.615 10277 10277 10273 QEplus033719.raw F4 884.7 496.9 747 655.1 760.2 817.4 319 2.28 1 FALSE 0.0008268 0.01138 0.383 -250 36591 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELQAEQEDR [K].eLQAEQEDR.[A] N-Term(TMT6plex) 3 Q8VDJ3 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1 Q8VDJ3; A0A087WP83; Q3V1M8 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1 0 2 2 0.6071 0 1 1 1 673.84119 1346.6751 1346.67494 0.12 0.00008 0/0 0 0 14029167 HCD 30 MS2 30.56047 527.3 110 41.6197 10279 10279 10273 QEplus033719.raw F4 552.8 493.4 569.1 390.6 657.9 500.1 120 3.97 1 FALSE 1.14E-05 1.76E-06 1.191 -250 36597 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSNEVQYDQR [R].tSNEVQYDQR.[L] N-Term(TMT6plex) 3 A0A0B4J1E2 SNW domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snw1 PE=1 SV=1 A0A0B4J1E2; Q9CV75; Q9CSN1 SNW domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snw1 PE=1 SV=1; SNW domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Snw1 PE=2 SV=1; SNW domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snw1 PE=1 SV=3 0 2 2 0.6908 0 1 1 1 734.8653 1468.72331 1468.72295 0.25 0.00018 0/0 0 0 12222852 HCD 30 MS2 36.56791 249.9 110 41.6223 10280 10280 10273 QEplus033719.raw F4 241.4 264.2 262.8 165.8 372.5 192.8 113 3.04 1 FALSE 1.14E-05 6.67E-07 1.271 -250 36602 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KMDAHPPR [K].kMDAHPPR.[L] N-Term(TMT6plex); K1(TMT6plex) 6 P13020-2; Q3SX14 Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn;TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin Q3UCW8; Q3U9Q8; P13020-2; Q3TGJ9; P13020; Q3SX14 Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Gelsolin OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=3; TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin 1 4 4 0.4936 0 1 1 1 353.20761 1409.80861 1409.80876 -0.1 -0.00004 0/0 0 0 3430078 HCD 30 MS2 84.20827 526.4 110 41.6247 10281 10281 10273 QEplus033719.raw F4 746.5 302 408.2 526.6 700.4 474.4 409 2.33 2 TRUE 3.35E-05 0.001168 0.648 -250 36610 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YGQNCQK [R].yGQNcQk.[V] N-Term(TMT6plex); C5(Carbamidomethyl); K7(TMT6plex) 3 Q61074 Protein phosphatase 1G OS=Mus musculus OX=10090 GN=Ppm1g PE=1 SV=3 Q61074; A0A0J9YUB0; A0A0J9YV96 Protein phosphatase 1G OS=Mus musculus OX=10090 GN=Ppm1g PE=1 SV=3; Protein phosphatase 1G (Fragment) OS=Mus musculus OX=10090 GN=Ppm1g PE=1 SV=2; Protein phosphatase 1G (Fragment) OS=Mus musculus OX=10090 GN=Ppm1g PE=1 SV=1 0 2 2 0.4049 0 1 1 1 678.36157 1355.71587 1355.71419 1.24 0.00084 0/0 0 0 3616342.75 HCD 30 MS2 44.37054 341.6 110 41.6273 10282 10282 10273 QEplus033719.raw F4 453.1 219.3 340.6 382.9 274.3 379.5 221 1.63 1 FALSE 0.0006294 0.009646 0.41 -250 36660 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLQNTR [R].vLQNTR.[H] N-Term(TMT6plex) 5 Q3TY95 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1 F8WHG5; Q8CE74; D3Z3N2; D3YXM7; Q3TY95 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Akt2 PE=2 SV=1; RAC-beta serine/threonine-protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1; RAC-beta serine/threonine-protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1 0 2 2 0.2843 0 1 1 1 480.29611 959.58495 959.58355 1.46 0.0007 0/0 0 0 8655203 HCD 30 MS2 41.80339 835.8 110 41.6509 10291 10291 10284 QEplus033719.raw F4 923.6 514.7 944.3 859 756.6 1016.9 101 2.04 1 FALSE 0.002518 0.04944 0.144 -250 36682 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAESASEAAK [K].qAESASEAAk.[K] N-Term(TMT6plex); K10(TMT6plex) 2 Q61335 B-cell receptor-associated protein 31 OS=Mus musculus OX=10090 GN=Bcap31 PE=1 SV=4 Q61335; Q3U9U5 B-cell receptor-associated protein 31 OS=Mus musculus OX=10090 GN=Bcap31 PE=1 SV=4; B-cell receptor-associated protein OS=Mus musculus OX=10090 GN=Bcap31 PE=2 SV=1 0 2 2 0.5996 0 1 1 1 725.40192 1449.79656 1449.79494 1.11 0.00081 0/0 0 0 4523813.5 HCD 30 MS2 0 431.6 110 41.6584 10294 10294 10284 QEplus033719.raw F4 522.4 294.2 488.4 485 361.8 438 425 4.47 1 FALSE 1.14E-05 1.00E-06 1.237 -250 36706 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAVETTAQSDNK [R].rAVETTAQSDNk.[I] N-Term(TMT6plex); K12(TMT6plex) 1 P50516 V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a PE=1 SV=2 P50516 V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a PE=1 SV=2 1 3 3 0.7276 0 1 1 1 593.33197 1777.98136 1777.98085 0.29 0.00017 0/0 0 0 24323430 HCD 30 MS2 20.35117 451.9 74.484 41.675 10300 10300 10295 QEplus033719.raw F4 444.1 338.3 488.8 453.5 491.2 495.3 435 6.24 1 FALSE 1.14E-05 6.41E-14 2.603 -250 36713 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAGHPLAQNER [K].vAGHPLAQNER.[C] N-Term(TMT6plex) 6 Q9CSC2 PX domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Snx3 PE=2 SV=1 Q9CSC2; Q9CU14; D3Z6Z0; D3Z789; Q78ZM0; O70492 PX domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Snx3 PE=2 SV=1; PX domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Snx3 PE=2 SV=1; Sorting nexin-3 OS=Mus musculus OX=10090 GN=Snx3 PE=1 SV=1; Sorting nexin-3 OS=Mus musculus OX=10090 GN=Snx3 PE=1 SV=1; Sorting nexin-3 OS=Mus musculus OX=10090 GN=Snx3 PE=1 SV=1; Sorting nexin-3 OS=Mus musculus OX=10090 GN=Snx3 PE=1 SV=3 0 2 2 0.4282 0 1 1 1 710.89691 1420.78655 1420.78583 0.51 0.00036 0/0 0 0 10687927 HCD 30 MS2 16.12549 275.9 110 41.6798 10302 10302 10295 QEplus033719.raw F4 276.3 233.5 322.8 221.4 309.5 291.8 436 3.48 1 FALSE 1.14E-05 9.56E-10 1.811 -250 36723 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLESAEERR [K].dLESAEERR.[E] N-Term(TMT6plex) 4 Q3ULJ5 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 Q3ULJ5; Q3U5M8; P14685; Q8BK46 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus OX=10090 GN=Psmd3 PE=1 SV=3; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 1 2 2 0.5578 0 1 1 1 667.34918 1333.69109 1333.69092 0.12 0.00008 0/0 0 0 5836372.5 HCD 30 MS2 0 165.2 110 41.6823 10303 10303 10295 QEplus033719.raw F4 189.5 126.3 179.7 142.7 164.9 188.1 230 3.98 1 FALSE 1.14E-05 3.37E-05 0.947 -250 36730 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEREAELR [K].tEREAELR.[K] N-Term(TMT6plex) 2 E0CYN2 Coiled-coil domain-containing protein R3HCC1L OS=Mus musculus OX=10090 GN=R3hcc1l PE=1 SV=1 E0CYN2; Q8BJM3 Coiled-coil domain-containing protein R3HCC1L OS=Mus musculus OX=10090 GN=R3hcc1l PE=1 SV=1; Coiled-coil domain-containing protein R3HCC1L OS=Mus musculus OX=10090 GN=R3hcc1l PE=1 SV=1 1 2 2 0.1602 0 1 1 1 616.84406 1232.68083 1232.67963 0.98 0.0006 0/0 0 0 5464382.5 HCD 30 MS2 10.23608 391.8 110 41.6848 10304 10304 10295 QEplus033719.raw F4 472 506.8 432.6 401.5 239.2 298.5 321 2.06 1 FALSE 0.005276 0.08998 0.034 -250 36736 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASALCDR [R].aSALcDR.[H] N-Term(TMT6plex); C5(Carbamidomethyl) 10 Q571J7 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (Fragment) OS=Mus musculus OX=10090 GN=Ppp2r2a PE=2 SV=1 Q6ZWR4-3; Q6ZWR4-2; A0A668KLA9; Q3TPC5; Q9CWU3; Q8BVB4; Q571J7; Q7TPQ7; Q6ZWR4; Q6P1F6 Isoform 3 of Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Mus musculus OX=10090 GN=Ppp2r2b; Isoform 2 of Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Mus musculus OX=10090 GN=Ppp2r2b; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Mus musculus OX=10090 GN=Ppp2r2b PE=1 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (Fragment) OS=Mus musculus OX=10090 GN=Ppp2r2a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Mus musculus OX=10090 GN=Ppp2r2a PE=1 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Mus musculus OX=10090 GN=Ppp2r2b PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (Fragment) OS=Mus musculus OX=10090 GN=Ppp2r2a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (Fragment) OS=Mus musculus OX=10090 GN=Ppp2r2a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Mus musculus OX=10090 GN=Ppp2r2b PE=1 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r2a PE=1 SV=1 0 2 2 0.3061 0 1 1 1 511.2692 1021.53111 1021.5298 1.29 0.00066 0/0 0 0 9569580 HCD 30 MS2 34.61729 761.4 110 41.6873 10305 10305 10295 QEplus033719.raw F4 802 615.1 781.7 678.8 854 836.9 168 2.45 1 FALSE 0.0001603 0.003593 0.539 -250 36754 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSEDTNPESK [K].qSEDTNPESk.[E] N-Term(TMT6plex); K10(TMT6plex) 4 Q5SUF2 Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1 F7A7G1; Q5SUF2-2; Q5SUF2-3; Q5SUF2 Luc7-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1; Isoform 2 of Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3; Isoform 3 of Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3; Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1 0 3 3 0.578 0 1 1 1 531.61096 1592.81833 1592.8168 0.96 0.00051 0/0 0 0 2996569.5 HCD 30 MS2 86.03192 358.4 110 41.6971 10308 10308 10306 QEplus033719.raw F4 402.9 258.3 360.2 301.7 410.9 416.3 197 2.18 1 FALSE 0.0008718 0.01203 0.373 -250 36760 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NREEAIK [K].nREEAIk.[Q] N-Term(TMT6plex); K7(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q7TQJ6; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 3 3 0.2661 0 1 1 1 439.93478 1317.7898 1317.78907 0.55 0.00024 0/0 0 0 124983168 HCD 30 MS2 15.50595 759.8 9.791 41.6993 10309 10309 10306 QEplus033719.raw F4 982.5 600.9 855.1 693 798.7 628.3 553 2.48 1 FALSE 0.0002323 0.004735 0.508 -250 36776 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FHPIQGHR [K].fHPIQGHR.[V] N-Term(TMT6plex) 1 Q9CX86 Heterogeneous nuclear ribonucleoprotein A0 OS=Mus musculus OX=10090 GN=Hnrnpa0 PE=1 SV=1 Q9CX86 Heterogeneous nuclear ribonucleoprotein A0 OS=Mus musculus OX=10090 GN=Hnrnpa0 PE=1 SV=1 0 3 3 0.6507 0 1 1 1 407.56705 1220.68659 1220.68499 1.31 0.00053 0/0 0 0 17831344 HCD 30 MS2 30.01871 561.3 80.747 41.7083 10313 10313 10306 QEplus033719.raw F4 604.7 464.3 617.3 480 649.9 551.5 331 3.55 1 FALSE 1.14E-05 5.51E-05 0.906 -250 36781 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVECPPPR [K].aVEcPPPR.[T] N-Term(TMT6plex); C4(Carbamidomethyl) 5 Q8CFK5 Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1 Q8CFK5; Q8C292; Q8C1V4; Q8R2P8; Q3TIV6 Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=1 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=1 SV=1 0 2 2 0.7143 0 1 1 1 577.81372 1154.62016 1154.61894 1.06 0.00061 0/0 0 0 16421523 HCD 30 MS2 15.97574 740.3 110 41.7109 10314 10314 10306 QEplus033719.raw F4 811.6 586.4 802.1 616.6 799.3 825.6 176 2.66 1 FALSE 4.43E-05 0.001428 0.63 -250 36790 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANHTPESCPETK [R].aNHTPEScPETk.[Y] N-Term(TMT6plex); C8(Carbamidomethyl); K12(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.7629 0 1 1 1 610.31396 1828.92734 1828.92637 0.53 0.00032 0/0 0 0 6393638.5 HCD 30 MS2 30.02254 377.7 110 41.7229 10318 10318 10317 QEplus033719.raw F4 477 214.1 310.4 505.3 227.4 532.2 213 5.44 2 FALSE 1.14E-05 8.72E-08 1.439 -250 36800 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMACVQR [K].nMAcVQR.[T] N-Term(TMT6plex); C4(Carbamidomethyl) 1 Q9WVA4 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4 Q9WVA4 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4 0 2 2 0.5372 0 1 1 1 554.2843 1107.56133 1107.56005 1.15 0.00064 0/0 0 0 402966208 HCD 30 MS2 2.852863 585.7 3.56 41.7277 10320 10320 10317 QEplus033719.raw F4 629.7 627.4 569 322.8 957.8 407.6 155 2.42 1 FALSE 0.001778 0.03066 0.213 -250 36808 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAIQATAR [K].eAIQATAR.[E] N-Term(TMT6plex) 11 Q8CAJ7 Aspartyl aminopeptidase OS=Mus musculus OX=10090 GN=Dnpep PE=2 SV=1 A0A087WNX3; A0A087WS31; Q8BPW9; A0A087WRC1; Q8CAJ7; A0A087WSD3; A0A087WSE6; Q3TVK3; Q3U3I6; A0A087WSU0; Q9Z2W0 Aspartyl aminopeptidase (Fragment) OS=Mus musculus OX=10090 GN=Dnpep PE=1 SV=1; Aspartyl aminopeptidase (Fragment) OS=Mus musculus OX=10090 GN=Dnpep PE=1 SV=1; Aspartyl aminopeptidase OS=Mus musculus OX=10090 GN=Dnpep PE=1 SV=1; Aspartyl aminopeptidase (Fragment) OS=Mus musculus OX=10090 GN=Dnpep PE=1 SV=1; Aspartyl aminopeptidase OS=Mus musculus OX=10090 GN=Dnpep PE=2 SV=1; Aspartyl aminopeptidase (Fragment) OS=Mus musculus OX=10090 GN=Dnpep PE=1 SV=1; Aspartyl aminopeptidase (Fragment) OS=Mus musculus OX=10090 GN=Dnpep PE=1 SV=1; Aspartyl aminopeptidase OS=Mus musculus OX=10090 GN=Dnpep PE=1 SV=1; Aspartyl aminopeptidase OS=Mus musculus OX=10090 PE=2 SV=1; Aspartyl aminopeptidase (Fragment) OS=Mus musculus OX=10090 GN=Dnpep PE=1 SV=6; Aspartyl aminopeptidase OS=Mus musculus OX=10090 GN=Dnpep PE=1 SV=2 0 2 2 0.4786 0 1 1 1 544.8172 1088.62712 1088.62614 0.9 0.00049 0/0 0 0 65139908 HCD 30 MS2 24.47433 655.4 20.151 41.73 10321 10321 10317 QEplus033719.raw F4 651.5 598.7 709 539.3 786.1 647.6 360 2.8 1 FALSE 1.14E-05 0.0007433 0.688 -250 36816 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMFGGSGTSSR [R].rMFGGSGTSSR.[S] N-Term(TMT6plex) 1 Q3TWV0 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 Q3TWV0 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 1 3 3 0.6883 0 1 1 1 457.90512 1371.70081 1371.70005 0.55 0.00025 0/0 0 0 32704738 HCD 30 MS2 39.22018 536.5 35.372 41.7322 10322 10322 10317 QEplus033719.raw F4 712.6 411.4 611.7 457.5 498.6 527.2 143 4.62 1 FALSE 1.14E-05 2.85E-06 1.151 -250 36823 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NREEAIK [K].nREEAIk.[Q] N-Term(TMT6plex); K7(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q7TQJ6; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 2 2 0.3045 0 1 1 1 659.39862 1317.78996 1317.78907 0.68 0.00045 0/0 0 0 20460554 HCD 30 MS2 6.906469 657 87.882 41.7345 10323 10323 10317 QEplus033719.raw F4 841 497.3 727.4 633.6 712.3 530.4 569 2.43 1 FALSE 0.00484 0.08475 0.049 -250 36831 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERPPEEVAAR [R].eRPPEEVAAR.[L] N-Term(TMT6plex) 6 Q8CAQ8 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q3U7N2; Q8CAQ8; Q8CAQ8-2; Q3TVZ5; Q3TQL4 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1 0 3 3 0.3104 0 1 1 1 461.59146 1382.75983 1382.75894 0.64 0.0003 0/0 0 0 10556163 HCD 30 MS2 64.19255 659.5 110 41.737 10324 10324 10317 QEplus033719.raw F4 731.3 539 729.4 530.6 643.5 783.2 321 4.22 1 FALSE 1.14E-05 1.98E-07 1.371 -250 36851 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLAAGDNNSK [K].rLAAGDNNSk.[W] N-Term(TMT6plex); K10(TMT6plex) 5 Q9JKF1 Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2 Q9JKF1; Q05CQ4; Q8CGH5; Q80UW7; Q6ZQK2 Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2; Iqgap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Iqgap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; IQ motif containing GTPase activating protein 1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; MKIAA0051 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1 1 3 3 0.5812 0 1 1 1 501.95941 1503.86368 1503.86436 -0.45 -0.00023 0/0 0 0 4049934 HCD 30 MS2 63.15356 694.3 110 41.7445 10327 10327 10317 QEplus033719.raw F4 1033.1 513.3 725.9 536.9 715.4 641.2 517 4.37 1 FALSE 0.001074 0.01387 0.347 -250 36871 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYVTTSTR [R].sYVTTSTR.[T] N-Term(TMT6plex) 9 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; Q3TWV0; A2AKJ2; Q3U6S1; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.6357 0 1 1 1 572.31445 1143.62163 1143.62072 0.8 0.00046 0/0 0 0 18458462 HCD 30 MS2 0 858.5 110 41.7588 10332 10332 10328 QEplus033719.raw F4 865.9 937.1 937.6 562.3 1112.5 735.8 191 2.91 2 FALSE 4.43E-05 0.001576 0.621 -250 36885 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQNGTSGVR [K].iQNGTSGVR.[F] N-Term(TMT6plex) 2 P70333 Heterogeneous nuclear ribonucleoprotein H2 OS=Mus musculus OX=10090 GN=Hnrnph2 PE=1 SV=1 P70333; Q3UR26 Heterogeneous nuclear ribonucleoprotein H2 OS=Mus musculus OX=10090 GN=Hnrnph2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnph2 PE=2 SV=1 0 2 2 0.4625 0 1 1 1 580.83282 1160.65837 1160.6585 -0.11 -0.00006 0/0 0 0 15147531 HCD 30 MS2 4.2891 638.6 110 41.7636 10334 10334 10328 QEplus033719.raw F4 736 491.4 663.8 580.3 625.6 734.3 433 3.07 1 FALSE 1.14E-05 1.83E-06 1.188 -250 36905 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FQDNNAEGDR [K].fQDNNAEGDR.[V] N-Term(TMT6plex) 7 B9EJ54 Nucleoporin 205 OS=Mus musculus OX=10090 GN=Nup205 PE=1 SV=1 Q80VE6; Q6P9Y6; B9EJ54; Q6PDG0; A0A0J9YUD5; Q6ZQG1; Q6P9L5 Nup205 protein (Fragment) OS=Mus musculus OX=10090 GN=Nup205 PE=2 SV=1; Nup205 protein (Fragment) OS=Mus musculus OX=10090 GN=Nup205 PE=2 SV=1; Nucleoporin 205 OS=Mus musculus OX=10090 GN=Nup205 PE=1 SV=1; Nup205 protein (Fragment) OS=Mus musculus OX=10090 GN=Nup205 PE=2 SV=1; Nucleoporin 205 OS=Mus musculus OX=10090 GN=Nup205 PE=1 SV=1; MKIAA0225 protein (Fragment) OS=Mus musculus OX=10090 GN=Nup205 PE=2 SV=1; Nup205 protein (Fragment) OS=Mus musculus OX=10090 GN=Nup205 PE=2 SV=1 0 2 2 0.8077 0 1 1 1 697.8277 1394.64812 1394.64979 -1.2 -0.00083 0/0 0 0 4787858 HCD 30 MS2 0 235.5 110 41.7712 10337 10337 10328 QEplus033719.raw F4 252 226 263.7 163 270.1 238.1 50 3.64 1 FALSE 1.14E-05 5.52E-08 1.476 -250 36908 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAELGAR [R].aAELGAR.[A] N-Term(TMT6plex) 6 Q3UB84 Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1 P47791-2; Q3UB84; Q3UAS7; Q3U9R7; P47791; Q3TWI5 "Isoform Cytoplasmic of Glutathione reductase, mitochondrial OS=Mus musculus OX=10090 GN=Gsr; Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1; Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1; Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1; Glutathione reductase, mitochondrial OS=Mus musculus OX=10090 GN=Gsr PE=1 SV=3; Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1" 0 2 2 0.316 0 1 1 1 458.77466 916.54204 916.54135 0.76 0.00035 0/0 0 0 28690896 HCD 30 MS2 69.59964 630.1 24.471 41.7734 10338 10338 10328 QEplus033719.raw F4 647.6 555.5 674.7 562.6 703.3 637.2 226 2.31 1 FALSE 0.002049 0.03616 0.189 -250 36914 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLTEETR [K].tLTEETR.[Q] N-Term(TMT6plex) 4 Q925I1 ATPase family AAA domain-containing protein 3 OS=Mus musculus OX=10090 GN=Atad3 PE=1 SV=1 H3BKI6; Q925I1-2; Q925I1; V9GWS5 "ATPase family, AAA domain-containing 3A OS=Mus musculus OX=10090 GN=Atad3a PE=1 SV=1; Isoform 2 of ATPase family AAA domain-containing protein 3 OS=Mus musculus OX=10090 GN=Atad3; ATPase family AAA domain-containing protein 3 OS=Mus musculus OX=10090 GN=Atad3 PE=1 SV=1; ATPase family, AAA domain-containing 3A (Fragment) OS=Mus musculus OX=10090 GN=Atad3a PE=1 SV=1" 0 2 2 0.3566 0 1 1 1 539.80164 1078.59599 1078.59417 1.69 0.00091 0/0 0 0 30438708 HCD 30 MS2 47.30564 1404.8 78.677 41.7807 10340 10340 10339 QEplus033719.raw F4 1494.9 1261.1 1532.9 1328.9 1454 1356.7 153 2.44 1 FALSE 0.001368 0.01956 0.285 -250 36937 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAVLQAAR [R].rAVLQAAR.[M] N-Term(TMT6plex) 3 Q9JKR6 Hypoxia up-regulated protein 1 OS=Mus musculus OX=10090 GN=Hyou1 PE=1 SV=1 F6TRP3; Q8VCI2; Q9JKR6 Hypoxia up-regulated protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hyou1 PE=1 SV=1; Hyou1 protein OS=Mus musculus OX=10090 GN=Hyou1 PE=2 SV=1; Hypoxia up-regulated protein 1 OS=Mus musculus OX=10090 GN=Hyou1 PE=1 SV=1 1 3 3 0.54 0 1 1 1 371.90717 1113.70694 1113.70539 1.39 0.00052 0/0 0 0 30677712 HCD 30 MS2 25.33391 336.2 41.908 41.7875 10343 10343 10339 QEplus033719.raw F4 395.2 261.9 335.7 279.7 406.1 338.4 136 4.13 1 FALSE 1.14E-05 1.15E-05 1.036 -250 36953 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVAEYQR [R].eVAEYQR.[N] N-Term(TMT6plex) 5 Q8K1N2 Pleckstrin homology-like domain family B member 2 OS=Mus musculus OX=10090 GN=Phldb2 PE=1 SV=2 F6QU68; Q8K1N2; Q8BZE3; Q8K1N2-2; D3Z069 Pleckstrin homology-like domain family B member 2 (Fragment) OS=Mus musculus OX=10090 GN=Phldb2 PE=1 SV=1; Pleckstrin homology-like domain family B member 2 OS=Mus musculus OX=10090 GN=Phldb2 PE=1 SV=2; PH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Phldb2 PE=2 SV=1; Isoform 2 of Pleckstrin homology-like domain family B member 2 OS=Mus musculus OX=10090 GN=Phldb2; Pleckstrin homology-like domain family B member 2 (Fragment) OS=Mus musculus OX=10090 GN=Phldb2 PE=1 SV=1 0 2 2 0.3695 0 1 1 1 562.30133 1123.59538 1123.5945 0.78 0.00044 0/0 0 0 9442540 HCD 30 MS2 0 542.7 110 41.7923 10345 10345 10339 QEplus033719.raw F4 577.3 435.1 601.1 468.8 592.3 581.5 206 2.03 1 FALSE 0.001506 0.02224 0.263 -250 36964 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMGTVQK [K].gmGTVQk.[G] N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex) 3 Q9CQM8 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=1 Q4VA28; Q9CQM8; O09167 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=2 SV=1; 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=1; 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=3 0 2 2 0.1765 0 1 1 1 597.85095 1194.69463 1194.69166 2.48 0.00148 0/0 0 0 7707837 HCD 30 MS2 18.48935 587.8 110 41.7973 10347 10347 10339 QEplus033719.raw F4 648.5 486.8 657.2 493.2 724.2 516.6 256 1.36 1 FALSE 0.005006 0.08684 0.043 -250 36980 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFGQGSR [R].kFGQGSR.[S] N-Term(TMT6plex); K1(TMT6plex) 1 P62274 40S ribosomal protein S29 OS=Mus musculus OX=10090 GN=Rps29 PE=1 SV=2 P62274 40S ribosomal protein S29 OS=Mus musculus OX=10090 GN=Rps29 PE=1 SV=2 1 2 2 0.4095 0 1 1 1 619.37463 1237.74199 1237.74173 0.21 0.00013 0/0 0 0 11438538 HCD 30 MS2 31.48329 635.6 110 41.8096 10351 10351 10350 QEplus033719.raw F4 910.9 465.8 695 692 447.9 601.8 287 1.05 1 FALSE 0.002956 0.05755 0.121 -250 36990 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPAGSPGK [R].gPAGSPGk.[A] N-Term(TMT6plex); K8(TMT6plex) 4 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 E0CXI2; Q3TUE2; Q01149; Q3TU64 Collagen alpha-2(I) chain (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.4641 0 1 1 1 564.84149 1128.67571 1128.67773 -1.79 -0.00101 0/0 0 0 1308316.625 HCD 30 MS2 0 292.9 110 41.8121 10352 10352 10350 QEplus033719.raw F4 466 253.2 319.4 158.5 282.3 278.2 303 1.81 1 FALSE 0.005667 0.09523 0.02 -250 37009 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRIDQAQK [R].sRIDQAQk.[H] N-Term(TMT6plex); K8(TMT6plex) 22 Z4YKH8 "Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1" Z4YKH8; A0A0R4J1B1; Z4YKF8; Z4YKG8; Q9QZ47-4; Q9QZ47; Z4YJU0; Q9QZ47-8; A2A6I8; A2A6J0; A2A6H6; Q9QZ47-3; Q9QZ47-5; Q9QZ47-10; Z4YNB2; Q9QZ47-2; Z4YKG3; J3QP61; Z4YKE7; A2A6J1; Q9QZ47-12; Q9QZ47-6 "Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Isoform A4e17 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=3; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Isoform B2e17 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Isoform A3e17 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Isoform A5e17 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Isoform B3e17 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Isoform A2e17 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3 PE=1 SV=1; Isoform B4e17 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3; Isoform A6e17 of Troponin T, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnnt3" 1 3 3 0.5106 0 1 1 1 468.61798 1403.83939 1403.83708 1.64 0.00077 0/0 0 0 99141576 HCD 30 MS2 33.5246 599.7 10.778 41.8189 10355 10355 10350 QEplus033719.raw F4 690.9 226.5 597.4 966.3 332.4 784.4 583 2.84 1 FALSE 0.002079 0.03893 0.178 -250 37045 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FHPIQGHR [K].fHPIQGHR.[V] N-Term(TMT6plex) 1 Q9CX86 Heterogeneous nuclear ribonucleoprotein A0 OS=Mus musculus OX=10090 GN=Hnrnpa0 PE=1 SV=1 Q9CX86 Heterogeneous nuclear ribonucleoprotein A0 OS=Mus musculus OX=10090 GN=Hnrnpa0 PE=1 SV=1 0 2 2 0.5172 0 1 1 1 610.84686 1220.68645 1220.68499 1.19 0.00073 0/0 0 0 10019288 HCD 30 MS2 37.48719 566.4 110 41.8375 10362 10362 10361 QEplus033719.raw F4 573.8 482.2 590.5 528.9 579.9 642.9 331 2.61 1 FALSE 0.001293 0.01756 0.304 -250 37068 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTQLGPGR [R].tTQLGPGR.[F] N-Term(TMT6plex) 1 Q99KV1 DnaJ homolog subfamily B member 11 OS=Mus musculus OX=10090 GN=Dnajb11 PE=1 SV=1 Q99KV1 DnaJ homolog subfamily B member 11 OS=Mus musculus OX=10090 GN=Dnajb11 PE=1 SV=1 0 2 2 0.3198 0 1 1 1 529.81207 1058.61687 1058.61557 1.22 0.00065 0/0 0 0 78432416 HCD 30 MS2 40.26301 416.6 12.41 41.8443 10365 10365 10361 QEplus033719.raw F4 438.3 336 458.8 387.8 394.3 484.2 310 1.97 1 FALSE 0.0002119 0.00444 0.515 -250 37080 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIRPVCR [K].eIRPVcR.[K] N-Term(TMT6plex); C6(Carbamidomethyl) 10 Q9Z1N5; Q3UVN0 Spliceosome RNA helicase Ddx39b OS=Mus musculus OX=10090 GN=Ddx39b PE=1 SV=1;RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1 Q3TPL7; Q9Z1N5; A0A1S6GWH2; Q3U837; Q3UVN0; Q3TIE4; Q3T9L0; Q8VDW0; Q3UAF1; Q3TB18 RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; Spliceosome RNA helicase Ddx39b OS=Mus musculus OX=10090 GN=Ddx39b PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39b PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; ATP-dependent RNA helicase DDX39A OS=Mus musculus OX=10090 GN=Ddx39a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39b PE=2 SV=1 0 3 3 0.0363 0 1 1 1 386.89233 1158.66245 1158.66148 0.84 0.00032 0/0 0 0 19091164 HCD 30 MS2 22.70728 564.7 74.67 41.8488 10367 10367 10361 QEplus033719.raw F4 622.4 503 627.5 401.1 668.4 565.8 331 2.48 2 FALSE 0.009444 0.1782 -0.116 -250 37088 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGIPPDQQR [K].eGIPPDQQR.[LV] N-Term(TMT6plex) 18 P62984; P62983 Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2;Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2 E9Q5F6; P62984; Q922Z8; Q922B0; Q3TH47; Q5SX22; E9Q4P0; P62983; Q78XY9; E9Q9J0; Q8R0Z9; B0LAC2; Q8C2K3; Q8VC46; A5JUZ1; A0A0A6YW67; E9QNP0; P0CG50 Polyubiquitin-C (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=1; Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Polyubiquitin-B (Fragment) OS=Mus musculus OX=10090 GN=Ubb PE=4 SV=2; KxDL motif-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2; Ubiquitin B OS=Mus musculus OX=10090 GN=Ubb PE=2 SV=1; 60S ribosomal protein L40 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=3 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiquitin A-52 residue ribosomal protein fusion product 1 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubb-ps PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiqutin subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Predicted pseudogene 8797 OS=Mus musculus OX=10090 GN=Gm8797 PE=4 SV=1; 60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Polyubiquitin-C OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=2 0 2 2 0.6609 0 1 1 1 634.84418 1268.68108 1268.67963 1.14 0.00072 0/0 0 0 15488602 HCD 30 MS2 0 443 110 41.8513 10368 10368 10361 QEplus033719.raw F4 448.3 391.5 455.3 337 520.5 505.4 285 2.89 2 FALSE 1.14E-05 0.0003005 0.765 -250 37091 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EASDGTDKAPTDSR [K].eASDGTDkAPTDSR.[T] N-Term(TMT6plex); K8(TMT6plex) 6 Q8C8U0 Liprin-beta-1 OS=Mus musculus OX=10090 GN=Ppfibp1 PE=1 SV=3 F6YZ95; Q8C8U0-2; Q8C8U0; Q3UJ84; Q3U417; Q8C8U0-3 Liprin-beta-1 (Fragment) OS=Mus musculus OX=10090 GN=Ppfibp1 PE=1 SV=1; Isoform 2 of Liprin-beta-1 OS=Mus musculus OX=10090 GN=Ppfibp1; Liprin-beta-1 OS=Mus musculus OX=10090 GN=Ppfibp1 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppfibp1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppfibp1 PE=2 SV=1; Isoform 3 of Liprin-beta-1 OS=Mus musculus OX=10090 GN=Ppfibp1 1 3 3 0.582 0 1 1 1 636.6629 1907.97416 1907.97107 1.62 0.00103 0/0 0 0 12669558 HCD 30 MS2 20.80966 517.3 110 41.8538 10369 10369 10361 QEplus033719.raw F4 462.5 597.6 589.6 384.6 618.4 450.9 275 3.11 1 FALSE 1.14E-05 1.50E-05 1.014 -250 37099 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HREMGNAIK [R].hREMGNAIk.[S] N-Term(TMT6plex); K9(TMT6plex) 1 A2AMM0 Caveolae-associated protein 4 OS=Mus musculus OX=10090 GN=Cavin4 PE=1 SV=1 A2AMM0 Caveolae-associated protein 4 OS=Mus musculus OX=10090 GN=Cavin4 PE=1 SV=1 1 3 3 0.6085 0 1 1 1 505.29437 1513.86856 1513.86734 0.81 0.00041 0/0 0 0 13712965 HCD 30 MS2 8.328138 796 110 41.8563 10370 10370 10361 QEplus033719.raw F4 924.4 376.2 841.1 925.7 517.4 1191.2 342 4.01 1 FALSE 1.14E-05 1.69E-05 1.004 -250 37107 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DPNAPK [K].dPNAPk.[R] N-Term(TMT6plex); K6(TMT6plex) 23 Q8BNM0; Q08943; Q9CT19; Q544R9 High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1;FACT complex subunit SSRP1 OS=Mus musculus OX=10090 GN=Ssrp1 PE=1 SV=2;Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb2 PE=2 SV=3;High mobility group box 3 OS=Mus musculus OX=10090 GN=Hmgb3 PE=1 SV=1 Q8BQ02; Q8BNM0; A2AP78; A0A1B0GQX9; Q08943-2; Q08943; Q9CT19; Q6P202; Q58EV5; Q80YZ1; Q05DR5; Q3UJK0; Q8C7C4; Q544R9; D3YZ18; P30681; Q3UAZ7; Q3U566; Q3UBK2; A0A0J9YUZ4; A2AW05; A0A0J9YUD8; Q497Z6 High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein B3 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb3 PE=1 SV=1; High mobility group protein B2 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb2 PE=1 SV=1; Isoform 2 of FACT complex subunit SSRP1 OS=Mus musculus OX=10090 GN=Ssrp1; FACT complex subunit SSRP1 OS=Mus musculus OX=10090 GN=Ssrp1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb2 PE=2 SV=3; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=bM168F16.1 PE=3 SV=1; FACT complex subunit SSRP1 (Fragment) OS=Mus musculus OX=10090 GN=Ssrp1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group box 3 OS=Mus musculus OX=10090 GN=Hmgb3 PE=1 SV=1; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=8; High mobility group protein B2 OS=Mus musculus OX=10090 GN=Hmgb2 PE=1 SV=3; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hmgb2 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; FACT complex subunit SSRP1 (Fragment) OS=Mus musculus OX=10090 GN=Ssrp1 PE=1 SV=1; High mobility group protein B1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 0 2 2 0.2409 0 1 1 1 550.33026 1099.65325 1099.65118 1.88 0.00103 0/0 0 0 8056990.5 HCD 30 MS2 0 765.1 110 41.8661 10373 10373 10372 QEplus033719.raw F4 1231.9 614.8 791.8 363.1 872 717 92 1.37 4 FALSE 0.006527 0.1045 -0.006 -250 37112 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FHELHR [K].fHELHR.[D] N-Term(TMT6plex) 1 Q543N7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pacsin3 PE=1 SV=1 Q543N7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pacsin3 PE=1 SV=1 0 3 3 0.4564 0 1 1 1 356.53668 1067.59549 1067.59478 0.67 0.00024 0/0 0 0 19920764 HCD 30 MS2 33.03465 452.3 84.134 41.8684 10374 10374 10372 QEplus033719.raw F4 598.2 248.2 446 436.4 432.3 552.7 137 2.98 1 FALSE 0.001541 0.02315 0.257 -250 37116 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGVLAGHDNR [R].aGVLAGHDNR.[V] N-Term(TMT6plex) 6 E9QKR0; Q3TQ70 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1;Beta1 subnuit of GTP-binding protein OS=Mus musculus OX=10090 GN=Gnb1 PE=1 SV=1 E9QKR0; Q3TQ70; Q3U1B1; E9PWM7; P62880; D3YZX3 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1; Beta1 subnuit of GTP-binding protein OS=Mus musculus OX=10090 GN=Gnb1 PE=1 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Gnb1 PE=2 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=3; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1 0 3 3 0.6697 0 1 1 1 413.56525 1238.68119 1238.6803 0.72 0.0003 0/0 0 0 143474864 HCD 30 MS2 41.34979 376.4 5.524 41.8706 10375 10375 10372 QEplus033719.raw F4 508.7 261.4 447.6 472 208.2 360.5 332 4.39 2 FALSE 1.14E-05 7.24E-07 1.264 -250 37124 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSHVFTAAR [K].gSHVFTAAR.[R] N-Term(TMT6plex) 5 P32067 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 P32067; Q3TG93; Q9CYB9; Q8BTU4; F6SXM5 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; HTH La-type RNA-binding domain-containing protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Lupus La protein homolog (Fragment) OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 0 3 3 0.6343 0 1 1 1 392.22287 1174.65406 1174.65302 0.88 0.00034 0/0 0 0 70092208 HCD 30 MS2 30.8868 300.4 13.601 41.8729 10376 10376 10372 QEplus033719.raw F4 293.7 241.3 329 242.8 334.5 360.9 363 3.09 1 FALSE 5.44E-05 0.001833 0.607 -250 37137 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NFDRENVR [K].nFDRENVR.[I] N-Term(TMT6plex) 1 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 1 3 3 0.443 0 1 1 1 426.89697 1278.67636 1278.67521 0.9 0.00038 0/0 0 0 25972632 HCD 30 MS2 24.41617 476.2 30.568 41.8796 10379 10379 10372 QEplus033719.raw F4 480.1 414.5 529.7 390.4 515.9 526.6 255 2.98 1 FALSE 0.001293 0.01766 0.303 -250 37147 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIVESGR [K].eIVESGR.[G] N-Term(TMT6plex) 9 Q9JKY5; Q8VD75 Huntingtin-interacting protein 1-related protein OS=Mus musculus OX=10090 GN=Hip1r PE=1 SV=2;Huntingtin-interacting protein 1 OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=2 Q9JKY5; Q6ZQ77; Q80UP1; A0A0J9YUA3; Q8VD75; Q6P1F5; Q9D689; Q8BPA2; A0A0G2JFU3 Huntingtin-interacting protein 1-related protein OS=Mus musculus OX=10090 GN=Hip1r PE=1 SV=2; MKIAA0655 protein (Fragment) OS=Mus musculus OX=10090 GN=Hip1r PE=2 SV=1; Hip1r protein (Fragment) OS=Mus musculus OX=10090 GN=Hip1r PE=2 SV=1; Huntingtin-interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=1; Huntingtin-interacting protein 1 OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=2; Huntingtin interacting protein 1 related OS=Mus musculus OX=10090 GN=Hip1r PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hip1r PE=2 SV=1; I/LWEQ domain-containing protein OS=Mus musculus OX=10090 GN=Hip1r PE=2 SV=1; Huntingtin-interacting protein 1-related protein (Fragment) OS=Mus musculus OX=10090 GN=Hip1r PE=1 SV=1 0 2 2 0.5437 0 1 1 1 509.79062 1018.57396 1018.57304 0.9 0.00046 0/0 0 0 21301100 HCD 30 MS2 33.11314 995.8 91.266 41.8819 10380 10380 10372 QEplus033719.raw F4 1134.1 722.2 1063.4 914.3 913.5 1227.3 199 2.52 2 FALSE 0.0003496 0.006829 0.461 -250 37154 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGVLAGHDNR [R].aGVLAGHDNR.[V] N-Term(TMT6plex) 6 E9QKR0; Q3TQ70 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1;Beta1 subnuit of GTP-binding protein OS=Mus musculus OX=10090 GN=Gnb1 PE=1 SV=1 E9QKR0; Q3TQ70; Q3U1B1; E9PWM7; P62880; D3YZX3 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1; Beta1 subnuit of GTP-binding protein OS=Mus musculus OX=10090 GN=Gnb1 PE=1 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Gnb1 PE=2 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=3; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1 0 2 2 0.5967 0 1 1 1 619.84424 1238.6812 1238.6803 0.73 0.00045 0/0 0 0 19476106 HCD 30 MS2 47.22179 808.2 79.457 41.8842 10381 10381 10372 QEplus033719.raw F4 929.4 724.7 883.4 789.5 740.4 782 332 3.62 2 FALSE 1.14E-05 1.46E-08 1.586 -250 37162 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YQVTGDR [R].yQVTGDR.[L] N-Term(TMT6plex) 1 Q9DAR7 m7GpppX diphosphatase OS=Mus musculus OX=10090 GN=Dcps PE=1 SV=1 Q9DAR7 m7GpppX diphosphatase OS=Mus musculus OX=10090 GN=Dcps PE=1 SV=1 0 2 2 0.5118 0 1 1 1 534.28784 1067.56841 1067.56829 0.11 0.00006 0/0 0 0 14760314 HCD 30 MS2 16.57559 759.9 110 41.8867 10382 10382 10372 QEplus033719.raw F4 758.5 755.6 850.7 656.7 811.8 725.9 106 2.54 1 FALSE 0.0003496 0.006909 0.46 -250 37169 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QYIQDR [R].qYIQDR.[I] N-Term(TMT6plex) 4 B9EKB0 Laminin B1 subunit 1 OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1 B9EKB0; E9QN70; P02469; Q3UHL7 Laminin B1 subunit 1 OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1; Laminin subunit beta-1 OS=Mus musculus OX=10090 GN=Lamb1 PE=1 SV=1; Laminin subunit beta-1 OS=Mus musculus OX=10090 GN=Lamb1 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1 0 2 2 0.4069 0 1 1 1 526.29089 1051.57451 1051.57337 1.08 0.00057 0/0 0 0 14100539 HCD 30 MS2 10.473 710.6 110 41.894 10384 10384 10383 QEplus033719.raw F4 597.3 715.5 813.1 729.7 633 774.8 168 2.31 1 FALSE 0.002696 0.05369 0.131 -250 37179 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STMGKPQR [K].sTMGkPQR.[L] N-Term(TMT6plex); K5(TMT6plex) 6 Q5XJF6 Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1 P53026; A0A3B2WDD2; Q5XJF6; Q99JL6; Q3U561; A0A3B2WBL1 60S ribosomal protein L10a OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=3; Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1; Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1; Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=2 SV=1; Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=2 SV=1; Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1 0 2 2 0.5077 0 1 1 1 681.90057 1362.79387 1362.79278 0.8 0.00055 0/0 0 0 12653370 HCD 30 MS2 13.47377 457.9 110 41.8965 10385 10385 10383 QEplus033719.raw F4 539.1 358.5 481.9 457.1 510.2 400.9 515 1.95 1 FALSE 0.002965 0.05773 0.12 -250 37189 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHYEEGPGK [R].sHYEEGPGk.[N] N-Term(TMT6plex); K9(TMT6plex) 1 P17665 "Cytochrome c oxidase subunit 7C, mitochondrial OS=Mus musculus OX=10090 GN=Cox7c PE=1 SV=1" P17665 "Cytochrome c oxidase subunit 7C, mitochondrial OS=Mus musculus OX=10090 GN=Cox7c PE=1 SV=1" 0 3 3 0.5892 0 1 1 1 487.92966 1461.77442 1461.77381 0.41 0.0002 0/0 0 0 90287760 HCD 30 MS2 45.01825 282.2 9.633 41.8988 10386 10386 10383 QEplus033719.raw F4 262.3 191.7 278.8 360.2 267.8 332.4 281 4.43 1 FALSE 1.14E-05 1.45E-07 1.397 -250 37201 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGLSGEPR [K].eGLSGEPR.[R] N-Term(TMT6plex) 2 Q91VE6 MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Mus musculus OX=10090 GN=Nifk PE=1 SV=1 Q91VE6; Q91VE6-2 MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Mus musculus OX=10090 GN=Nifk PE=1 SV=1; Isoform 2 of MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Mus musculus OX=10090 GN=Nifk 0 2 2 0.2698 0 1 1 1 537.29358 1073.57988 1073.57885 0.96 0.00051 0/0 0 0 10684420 HCD 30 MS2 35.56791 773.8 85.497 41.9035 10388 10388 10383 QEplus033719.raw F4 1081.3 628.3 824.8 483.1 746.1 878.9 239 2.52 1 FALSE 0.001736 0.02931 0.22 -250 37212 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALRPGPGQ [R].aLRPGPGQ.[-] N-Term(TMT6plex) 1 F6WIM8 Collagen alpha-1(XII) chain (Fragment) OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1 F6WIM8 Collagen alpha-1(XII) chain (Fragment) OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1 0 2 2 0.3058 0 1 1 1 512.80908 1024.61089 1024.61009 0.77 0.0004 0/0 0 0 8006221.5 HCD 30 MS2 25.52254 667.2 110 41.9108 10391 10391 10383 QEplus033719.raw F4 686.8 518.3 641.9 513 958.3 685.1 115 1.21 1 FALSE 0.005006 0.08694 0.043 -250 37230 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDDESMQR [R].vDDESMQR.[F] N-Term(TMT6plex) 1 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 0 2 2 0.7485 0 1 1 1 604.79248 1208.57768 1208.57787 -0.15 -0.00009 0/0 0 0 6678366 HCD 30 MS2 15.29263 549.1 110 41.9158 10393 10393 10383 QEplus033719.raw F4 554.4 538.5 581 412.4 631.7 576.4 73 3.42 1 FALSE 1.14E-05 0.0001287 0.836 -250 37234 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNNVSEHEDTDK [K].tNNVSEHEDTDk.[Y] N-Term(TMT6plex); K12(TMT6plex) 1 Q9JIF7 Coatomer subunit beta OS=Mus musculus OX=10090 GN=Copb1 PE=1 SV=1 Q9JIF7 Coatomer subunit beta OS=Mus musculus OX=10090 GN=Copb1 PE=1 SV=1 0 3 3 0.7996 0 1 1 1 616.3114 1846.91965 1846.91831 0.73 0.00045 0/0 0 0 11303351 HCD 30 MS2 5.794892 409.5 110 41.9231 10395 10395 10394 QEplus033719.raw F4 467.6 309.9 329.8 396.7 735.3 217.8 182 5.69 1 FALSE 1.14E-05 1.63E-12 2.337 -250 37239 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGIPPQQQR [K].eGIPPQQQR.[L] N-Term(TMT6plex) 2 P29595 NEDD8 OS=Mus musculus OX=10090 GN=Nedd8 PE=1 SV=2 P29595; Q3TY05 NEDD8 OS=Mus musculus OX=10090 GN=Nedd8 PE=1 SV=2; NEDD8 (Fragment) OS=Mus musculus OX=10090 GN=Nedd8 PE=2 SV=1 0 2 2 0.5113 0 1 1 1 641.35944 1281.7116 1281.71126 0.26 0.00017 0/0 0 0 3501171 HCD 30 MS2 64.87122 356.5 110 41.9256 10396 10396 10394 QEplus033719.raw F4 439.3 271.5 395.9 298.4 356.4 377.8 366 2.66 1 FALSE 1.14E-05 6.92E-05 0.888 -250 37245 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QMQQIR [K].qMQQIR.[M] N-Term(TMT6plex) 3 Q5M8R8 60S acidic ribosomal protein P0 OS=Mus musculus OX=10090 GN=Rplp0 PE=2 SV=1 Q5FWB6; Q5M8R8; D3YVM5 60S acidic ribosomal protein P0 OS=Mus musculus OX=10090 GN=Rplp0 PE=2 SV=1; 60S acidic ribosomal protein P0 OS=Mus musculus OX=10090 GN=Rplp0 PE=2 SV=1; 60S acidic ribosomal protein P0 (Fragment) OS=Mus musculus OX=10090 GN=Rplp0 PE=1 SV=1 0 2 2 0.2552 0 1 1 2 516.79535 1032.58342 1032.58217 1.22 0.00063 0/0 0 0 47450372 HCD 30 MS2 48.89237 560 13.763 41.9301 10398 10398 10394 QEplus033719.raw F4 573.9 466.2 578.6 516.9 616.3 608.3 307 1.92 1 FALSE 0.004757 0.08357 0.052 -250 37271 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGGAEESAIR [R].eGGAEESAIR.[V] N-Term(TMT6plex) 6 G3X972 "Sec24-related gene family, member C (S. cerevisiae) OS=Mus musculus OX=10090 GN=Sec24c PE=1 SV=1" Q8CGF4; G3X972; A0A286YD08; A0A286YDI8; Q80U83; Q3V222 "Sec24 related gene family, member C (S. cerevisiae) OS=Mus musculus OX=10090 GN=Sec24c PE=2 SV=1; Sec24-related gene family, member C (S. cerevisiae) OS=Mus musculus OX=10090 GN=Sec24c PE=1 SV=1; Sec24-related gene family, member C (S. cerevisiae) (Fragment) OS=Mus musculus OX=10090 GN=Sec24c PE=1 SV=1; Sec24-related gene family, member C (S. cerevisiae) OS=Mus musculus OX=10090 GN=Sec24c PE=1 SV=1; MKIAA0079 protein (Fragment) OS=Mus musculus OX=10090 GN=Sec24c PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sec24c PE=2 SV=1" 0 2 2 0.4597 0 1 1 1 624.32538 1247.64348 1247.64291 0.46 0.00028 0/0 0 0 9689929 HCD 30 MS2 6.348929 461 110 41.9371 10401 10401 10394 QEplus033719.raw F4 477.5 384.3 482.5 402.3 513.8 505.8 182 3.35 1 FALSE 1.14E-05 1.08E-07 1.421 -250 37282 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHYEEGPGK [R].sHYEEGPGk.[N] N-Term(TMT6plex); K9(TMT6plex) 1 P17665 "Cytochrome c oxidase subunit 7C, mitochondrial OS=Mus musculus OX=10090 GN=Cox7c PE=1 SV=1" P17665 "Cytochrome c oxidase subunit 7C, mitochondrial OS=Mus musculus OX=10090 GN=Cox7c PE=1 SV=1" 0 2 2 0.5438 0 1 1 1 731.39081 1461.77434 1461.77381 0.36 0.00026 0/0 0 0 7286442.5 HCD 30 MS2 0 246.4 110 41.9422 10403 10403 10394 QEplus033719.raw F4 216.3 179.9 239.5 320.6 244.3 277.7 281 3.31 1 FALSE 1.14E-05 2.93E-05 0.959 -250 37309 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CSYCNNK [R].cSYcNNk.[L] N-Term(TMT6plex); C1(Carbamidomethyl); C4(Carbamidomethyl); K7(TMT6plex) 5 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q8CD09; Q9ERG0; Q8C7S2; Q8C3R7; Q8BT15 LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 0 2 2 0.6941 0 1 1 1 702.34503 1403.68279 1403.68118 1.15 0.00081 0/0 0 0 5573475.5 HCD 30 MS2 49.24214 435.5 110 41.9545 10407 10407 10405 QEplus033719.raw F4 516.3 364 560.8 396.7 359.7 415.8 79 2.55 1 FALSE 0.0008991 0.01242 0.367 -250 37329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAQSELAAHQK [K].rAQSELAAHQk.[K] N-Term(TMT6plex); K11(TMT6plex) 3 Q3TS44 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 A0A1B0GS70; Q8BTU5; Q3TS44 Proteasome subunit alpha type-1 OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 1 4 4 0.7089 0 1 1 1 425.00256 1696.98842 1696.98587 1.5 0.00064 0/0 0 0 34158872 HCD 30 MS2 8.403625 421.3 41.391 41.9613 10410 10410 10405 QEplus033719.raw F4 480.8 326.8 399.3 416.7 561.9 342.2 393 4.81 1 FALSE 1.14E-05 6.69E-08 1.46 -250 37332 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALENDPDCR [K].aLENDPDcR.[H] N-Term(TMT6plex); C8(Carbamidomethyl) 10 A0A1C7CYV0 Plastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1 Q3U9M7; Q3UKB1; A0A1C7CYV0; Q3TJX0; Q61233; B1AX58; Q3U6Z1; Q3UJG9; Q99K51; Q3U6N7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Lcp1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pls3 PE=2 SV=1; Plastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lcp1 PE=2 SV=1; Plastin-2 OS=Mus musculus OX=10090 GN=Lcp1 PE=1 SV=4; Plastin-3 OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lcp1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pls3 PE=2 SV=1; Plastin-3 OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lcp1 PE=2 SV=1 0 2 2 0.9062 0 1 1 1 659.81696 1318.62663 1318.62588 0.57 0.00038 0/0 0 0 15120218 HCD 30 MS2 49.6051 647.8 101.615 41.9636 10411 10411 10405 QEplus033719.raw F4 702 613.8 777.9 501.2 741.8 550 46 2.88 1 FALSE 1.14E-05 0.0005709 0.711 -250 37344 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSGGGQGSTNYGK [R].gSGGGQGSTNYGk.[S] N-Term(TMT6plex); K13(TMT6plex) 1 Q544Z3 S1 protein D2 OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1 Q544Z3 S1 protein D2 OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1 0 2 2 0.7329 0 1 1 1 814.42572 1627.84416 1627.84402 0.09 0.00007 0/0 0 0 9116441 HCD 30 MS2 4.516406 471.6 110 41.9707 10414 10414 10405 QEplus033719.raw F4 530.7 433.8 431.4 331.2 763.7 338.5 280 4.68 1 FALSE 1.14E-05 1.09E-13 2.559 -250 37351 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYYYHR [R].tYYYHR.[Q] N-Term(TMT6plex) 2 Q9DCS9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 OS=Mus musculus OX=10090 GN=Ndufb10 PE=1 SV=3 Q9DCS9; D3YUK4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 OS=Mus musculus OX=10090 GN=Ndufb10 PE=1 SV=3; Complex I-PDSW (Fragment) OS=Mus musculus OX=10090 GN=Ndufb10 PE=1 SV=1 0 3 3 0.6903 0 1 1 1 377.86441 1131.57868 1131.57846 0.19 0.00007 0/0 0 0 7011659 HCD 30 MS2 59.84774 539.7 110 41.9731 10415 10415 10405 QEplus033719.raw F4 597.4 414.7 607.9 486.4 535.3 596.4 102 2.68 1 FALSE 0.001877 0.03172 0.208 -250 37356 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSSLPTR [K].dSSLPTR.[T] N-Term(TMT6plex) 5 A0A0A0MQ79 Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1 A0A0A0MQ79; S4R294; S4R2J9; Q3TLH4; Q3TLH4-5 Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=3; Isoform 5 of Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c 0 2 2 0.2886 0 1 1 1 502.78214 1004.55699 1004.55739 -0.39 -0.0002 0/0 0 0 13010316 HCD 30 MS2 26.55974 811 110 41.9804 10417 10417 10416 QEplus033719.raw F4 1088.3 628 808.6 629.1 900.4 811.4 236 2.01 1 FALSE 0.000262 0.005344 0.493 -250 37360 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSQPGPPVER [K].gSQPGPPVER.[Q] N-Term(TMT6plex) 16 O70318 Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2 Q811B2; B6ZHC6; O70318; B6ZHD0; Q80UE5; Q8CGJ6; Q80UE3; A0A1W2P7H7; A0A1W2P7I4; Q80UE4; A0A1W2P6I5; B6ZHC5; B6ZHC7; Q8C928; A0A1W2P896; Q3UNQ6 Epb4.1l2 protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Epb4.1l2 protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Protein 4.1G OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1 0 2 2 0.4382 0 1 1 1 626.84558 1252.68389 1252.68472 -0.66 -0.00042 0/0 0 0 6127318 HCD 30 MS2 0 329.1 110 41.983 10418 10418 10416 QEplus033719.raw F4 333.4 328.3 363.6 227 405.8 316.7 362 2.51 1 FALSE 1.14E-05 0.0004805 0.726 -250 37406 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAQSELAAHQK [K].rAQSELAAHQk.[K] N-Term(TMT6plex); K11(TMT6plex) 3 Q3TS44 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 A0A1B0GS70; Q8BTU5; Q3TS44 Proteasome subunit alpha type-1 OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 1 3 3 0.705 0 1 1 1 566.33435 1696.9885 1696.98587 1.55 0.00088 0/0 0 0 17258992 HCD 30 MS2 14.59623 511.9 110 41.9968 10424 10424 10416 QEplus033719.raw F4 546.5 383.4 478.3 565.6 624.6 472.9 393 5.05 1 FALSE 1.14E-05 1.74E-13 2.521 -250 37421 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMASGVNTR [K].eMASGVNTR.[I] N-Term(TMT6plex) 7 Q6NXX6 V-type proton ATPase subunit a OS=Mus musculus OX=10090 GN=Atp6v0a1 PE=2 SV=1 Q6NXX6; Q9Z1G4-2; Q9Z1G4-3; Q9Z1G4; K3W4T3; Q3TY98; Q3TXT5 V-type proton ATPase subunit a OS=Mus musculus OX=10090 GN=Atp6v0a1 PE=2 SV=1; Isoform A1-I of V-type proton ATPase 116 kDa subunit a1 OS=Mus musculus OX=10090 GN=Atp6v0a1; Isoform A1-III of V-type proton ATPase 116 kDa subunit a1 OS=Mus musculus OX=10090 GN=Atp6v0a1; V-type proton ATPase 116 kDa subunit a1 OS=Mus musculus OX=10090 GN=Atp6v0a1 PE=1 SV=3; V-type proton ATPase subunit a OS=Mus musculus OX=10090 GN=Atp6v0a1 PE=1 SV=1; V-type proton ATPase subunit a OS=Mus musculus OX=10090 GN=Atp6v0a1 PE=2 SV=1; V-type proton ATPase subunit a OS=Mus musculus OX=10090 GN=Atp6v0a1 PE=2 SV=1 0 2 2 0.6588 0 1 1 1 597.31152 1193.61577 1193.61459 0.99 0.00059 0/0 0 0 11523375 HCD 30 MS2 19.42904 522.5 110 42.0016 10426 10426 10416 QEplus033719.raw F4 521.4 365 567.8 556.8 466.1 658 143 2.55 1 FALSE 1.14E-05 0.0004292 0.735 -250 37425 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VREAAEK [R].vREAAEk.[A] N-Term(TMT6plex); K7(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 1 3 3 0.3504 0 1 1 1 420.92834 1260.77048 1260.76761 2.28 0.00096 0/0 0 0 6619676 HCD 30 MS2 49.64144 626.1 110 42.0088 10428 10428 10427 QEplus033719.raw F4 1378 367.1 544.5 403.8 425.7 637.6 513 2.74 1 FALSE 0.002033 0.03554 0.192 -250 37443 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPEVTASR [K].tPEVTASR.[L] N-Term(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 2 2 0.3413 0 1 1 1 545.30969 1089.61211 1089.61015 1.79 0.00098 0/0 0 0 31567968 HCD 30 MS2 23.99884 543.5 29.611 42.0136 10430 10430 10427 QEplus033719.raw F4 624.4 250.5 552.9 694.6 271.4 866.9 311 2.52 1 FALSE 0.0002119 0.00425 0.52 -250 37452 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGQNLNR [K].mGQNLNR.[I] N-Term(TMT6plex) 2 O55222 Integrin-linked protein kinase OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2 O55222; D3YZA5 Integrin-linked protein kinase OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2; Integrin-linked protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2 0 2 2 0.4008 0 1 1 1 531.289 1061.57073 1061.57233 -1.51 -0.0008 0/0 0 0 22014802 HCD 30 MS2 21.65785 982.9 65.123 42.0159 10431 10431 10427 QEplus033719.raw F4 932.8 828.8 1133.4 774 1028.6 1200.1 296 2.37 1 FALSE 0.0003496 0.006727 0.463 -250 37459 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEGDAAALNRR [K].aEGDAAALNRR.[I] N-Term(TMT6plex) 1 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 1 2 2 0.6096 0 1 1 1 686.87939 1372.75151 1372.74944 1.51 0.00104 0/0 0 0 14151479 HCD 30 MS2 0 203.8 110 42.0184 10432 10432 10427 QEplus033719.raw F4 205.2 208.4 203.8 133.9 312.9 158.6 379 3.97 1 FALSE 1.14E-05 1.01E-08 1.617 -250 37466 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPAEAEATTD [R].gPAEAEATTD.[-] N-Term(TMT6plex) 1 Q91YR1 Twinfilin-1 OS=Mus musculus OX=10090 GN=Twf1 PE=1 SV=2 Q91YR1 Twinfilin-1 OS=Mus musculus OX=10090 GN=Twf1 PE=1 SV=2 0 2 2 0.8689 0 1 1 1 595.79053 1190.57378 1190.57383 -0.04 -0.00002 0/0 0 0 10527145 HCD 30 MS2 28.36464 373.5 110 42.0209 10433 10433 10427 QEplus033719.raw F4 430.9 306.9 430.5 281.2 360.6 430.6 56 2.67 1 FALSE 0.001429 0.0207 0.275 -250 37489 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGESEDLASR [K].aGESEDLASR.[L] N-Term(TMT6plex) 10 A0A6I8MX07 Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=1 A0A6I8MX07; A2AN45; Q921M4; A2AN48; Z4YJU8; A2AN46; E9PUQ5; Q5DTL1; Q921M4-2; A0A6I8MWY5 Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=1; Golgin subfamily A member 2 (Fragment) OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=2; Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=3; Golgin subfamily A member 2 (Fragment) OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=1; Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=3; Golgin subfamily A member 2 (Fragment) OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=3; Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=2; MKIAA4150 protein (Fragment) OS=Mus musculus OX=10090 GN=Golga2 PE=2 SV=1; Isoform 2 of Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2; Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=1 0 2 2 0.6786 0 1 1 1 632.32306 1263.63884 1263.63783 0.8 0.00051 0/0 0 0 6976976 HCD 30 MS2 0 412.3 110 42.0282 10436 10436 10427 QEplus033719.raw F4 446.4 341.3 458.6 353.2 423.5 450.8 155 3.64 1 FALSE 1.14E-05 2.73E-07 1.345 -250 37505 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQPQNLAR [R].aQPQNLAR.[H] N-Term(TMT6plex) 3 Q99PL6 UBX domain-containing protein 6 OS=Mus musculus OX=10090 GN=Ubxn6 PE=1 SV=1 Q6KAM0; Q99PL6; Q99PL6-2 MFLJ00394 protein (Fragment) OS=Mus musculus OX=10090 GN=Ubxn6 PE=2 SV=1; UBX domain-containing protein 6 OS=Mus musculus OX=10090 GN=Ubxn6 PE=1 SV=1; Isoform 2 of UBX domain-containing protein 6 OS=Mus musculus OX=10090 GN=Ubxn6 0 2 2 0.5189 0 1 1 1 563.82971 1126.65215 1126.65302 -0.78 -0.00044 0/0 0 0 6868994.5 HCD 30 MS2 25.18424 461 110 42.038 10439 10439 10438 QEplus033719.raw F4 489.6 420.6 554.3 346.4 498.4 456.9 195 2.91 1 FALSE 0.0002814 0.005738 0.484 -250 37516 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YDTGAVR [R].yDTGAVR.[A] N-Term(TMT6plex) 1 Q9ERU9 E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 Q9ERU9 E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 0 2 2 0.4585 0 1 1 1 505.77762 1010.54796 1010.54683 1.12 0.00057 0/0 0 0 10315616 HCD 30 MS2 33.73065 745.1 110 42.043 10441 10441 10438 QEplus033719.raw F4 796.5 629.1 803.8 634 821.1 786.1 111 2.29 1 FALSE 0.001506 0.02238 0.262 -250 37525 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERDDDDEDGDGDADGATGK [K].eRDDDDEDGDGDADGATGk.[K] N-Term(TMT6plex); K19(TMT6plex) 5 O08663 Methionine aminopeptidase 2 OS=Mus musculus OX=10090 GN=Metap2 PE=1 SV=1 O08663; Q3UI33; M0QWM9; M0QW48; Q3TMN1 Methionine aminopeptidase 2 OS=Mus musculus OX=10090 GN=Metap2 PE=1 SV=1; Methionine aminopeptidase 2 OS=Mus musculus OX=10090 GN=Metap2 PE=1 SV=1; Methionine aminopeptidase 2 (Fragment) OS=Mus musculus OX=10090 GN=Metap2 PE=1 SV=1; Methionine aminopeptidase 2 (Fragment) OS=Mus musculus OX=10090 GN=Metap2 PE=1 SV=1; Methionine aminopeptidase 2 OS=Mus musculus OX=10090 GN=Metap2 PE=1 SV=1 1 3 3 0.9541 0 1 1 1 804.35474 2411.04966 2411.04827 0.57 0.00046 0/0 0 0 6587862 HCD 30 MS2 0 229.9 110 42.0455 10442 10442 10438 QEplus033719.raw F4 233.5 240.8 252.6 149.8 244.5 258.2 25 9.37 1 FALSE 1.14E-05 6.31E-16 5.301 -250 37534 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APPPEPGATR [K].aPPPEPGATR.[A] N-Term(TMT6plex) 2 Q9CT10 Ran-binding protein 3 OS=Mus musculus OX=10090 GN=Ranbp3 PE=1 SV=2 Q9CT10; A0A3B2WCL5 Ran-binding protein 3 OS=Mus musculus OX=10090 GN=Ranbp3 PE=1 SV=2; Ran-binding protein 3 OS=Mus musculus OX=10090 GN=Ranbp3 PE=1 SV=1 0 2 2 0.4981 0 1 1 1 611.34344 1221.67961 1221.6789 0.58 0.00036 0/0 0 0 7195055.5 HCD 30 MS2 10.46803 260.3 110 42.053 10445 10445 10438 QEplus033719.raw F4 266.1 233.7 290.7 184.2 312.9 274.2 405 2.63 1 FALSE 0.0008718 0.01201 0.373 -250 37543 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KCTENDIR [K].kcTENDIR.[V] N-Term(TMT6plex); K1(TMT6plex); C2(Carbamidomethyl) 5 P28659 CUGBP Elav-like family member 1 OS=Mus musculus OX=10090 GN=Celf1 PE=1 SV=2 P28659-2; P28659; P28659-3; P28659-4; A0A0R4J0T5 Isoform 2 of CUGBP Elav-like family member 1 OS=Mus musculus OX=10090 GN=Celf1; CUGBP Elav-like family member 1 OS=Mus musculus OX=10090 GN=Celf1 PE=1 SV=2; Isoform 3 of CUGBP Elav-like family member 1 OS=Mus musculus OX=10090 GN=Celf1; Isoform 4 of CUGBP Elav-like family member 1 OS=Mus musculus OX=10090 GN=Celf1; CUGBP Elav-like family member 1 OS=Mus musculus OX=10090 GN=Celf1 PE=1 SV=1 1 3 3 0.3084 0 1 1 1 498.61032 1493.81641 1493.81463 1.19 0.00059 0/0 0 0 6522538 HCD 30 MS2 10.97861 622.6 110 42.0555 10446 10446 10438 QEplus033719.raw F4 692.5 464.3 625.7 600 764.8 588.1 406 2.14 1 FALSE 0.007041 0.1114 -0.023 -250 37564 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHYEEGPGK [R].sHYEEGPGk.[N] N-Term(TMT6plex); K9(TMT6plex) 1 P17665 "Cytochrome c oxidase subunit 7C, mitochondrial OS=Mus musculus OX=10090 GN=Cox7c PE=1 SV=1" P17665 "Cytochrome c oxidase subunit 7C, mitochondrial OS=Mus musculus OX=10090 GN=Cox7c PE=1 SV=1" 0 2 2 0.5298 0 1 1 1 731.39056 1461.77385 1461.77381 0.03 0.00002 0/0 0 0 2320751 HCD 30 MS2 0 154.4 110 42.0679 10450 10450 10449 QEplus033719.raw F4 136 101.7 152.7 190.2 151.5 194.2 282 3.19 1 FALSE 1.14E-05 3.27E-05 0.95 -250 37579 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VETVGQPDRR [R].vETVGQPDRR.[D] N-Term(TMT6plex) 1 Q9Z2L7 Cytokine receptor-like factor 3 OS=Mus musculus OX=10090 GN=Crlf3 PE=1 SV=1 Q9Z2L7 Cytokine receptor-like factor 3 OS=Mus musculus OX=10090 GN=Crlf3 PE=1 SV=1 1 3 3 0.125 0 1 1 1 462.5972 1385.77704 1385.76984 5.2 0.0024 0/0 0 0 26205804 HCD 30 MS2 33.08125 721 67.092 42.0746 10453 10453 10449 QEplus033719.raw F4 864 520.8 839.6 635.1 741.8 724.7 367 2.48 1 FALSE 0.002115 0.0393 0.177 -250 37586 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDCDQHSDIAQR [R].vDcDQHSDIAQR.[Y] N-Term(TMT6plex); C3(Carbamidomethyl) 2 Q3URM4 Thioredoxin domain-containing protein OS=Mus musculus OX=10090 GN=Erp44 PE=2 SV=1 Q3URM4; Q9D1Q6 Thioredoxin domain-containing protein OS=Mus musculus OX=10090 GN=Erp44 PE=2 SV=1; Endoplasmic reticulum resident protein 44 OS=Mus musculus OX=10090 GN=Erp44 PE=1 SV=1 0 3 3 0.7782 0 1 1 1 558.26953 1672.79404 1672.79105 1.79 0.001 0/0 0 0 12449890 HCD 30 MS2 23.02803 464.5 110 42.0771 10454 10454 10449 QEplus033719.raw F4 467.9 423 481.6 391.7 513.2 509.5 67 5.23 1 FALSE 1.14E-05 6.60E-09 1.651 -250 37593 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APEPMSR [K].aPEPMSR.[R] N-Term(TMT6plex) 3 Q80UG5 Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 Q80UG5-3; Q80UG5; A2A6U3 Isoform 3 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 0 2 2 0.3583 0 1 1 1 508.77377 1016.54027 1016.53963 0.63 0.00032 0/0 0 0 12484531 HCD 30 MS2 24.66634 887.5 110 42.0796 10455 10455 10449 QEplus033719.raw F4 945.5 838.1 1000.1 631.6 1019.4 890.6 103 2.4 1 FALSE 0.001607 0.0255 0.241 -250 37601 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSHVFTAAR [K].gSHVFTAAR.[R] N-Term(TMT6plex) 5 P32067 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 P32067; Q3TG93; Q9CYB9; Q8BTU4; F6SXM5 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; HTH La-type RNA-binding domain-containing protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Lupus La protein homolog (Fragment) OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 0 2 2 0.4769 0 1 1 1 587.82996 1174.65264 1174.65302 -0.33 -0.00019 0/0 0 0 7564100.5 HCD 30 MS2 21.09461 449.9 110 42.0821 10456 10456 10449 QEplus033719.raw F4 435 391.8 484.2 327.6 588.5 472.2 377 2.81 1 FALSE 1.14E-05 2.84E-05 0.961 -250 37618 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRPENPKPQDGK [R].rRPENPkPQDGk.[E] N-Term(TMT6plex); K7(TMT6plex); K12(TMT6plex) 6 Q810K5 Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 A2BGG7; Q810K5; Q8BRJ5; P62960; Q71V06; Q60951 Y-box-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=1; Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Y-box-binding protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=3; Y box transcription factor (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1b OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 1 5 5 0.5643 0 1 1 1 422.65601 2109.25092 2109.24958 0.64 0.00027 0/0 0 0 23365130 HCD 30 MS2 34.47972 282.4 31.932 42.0869 10458 10458 10449 QEplus033719.raw F4 314.6 218 281.6 203.3 338.3 338.9 328 3.42 1 FALSE 0.0001707 0.003878 0.531 -250 37625 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEPSHDASK [K].vEPSHDASk.[V] N-Term(TMT6plex); K9(TMT6plex) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.6281 0 1 1 1 476.60153 1427.79004 1427.78946 0.41 0.00019 0/0 0 0 15870699 HCD 30 MS2 26.80478 678.9 110 42.0894 10459 10459 10449 QEplus033719.raw F4 1017.2 502.2 756.2 517.8 664.2 615.8 285 4.06 1 FALSE 1.14E-05 7.69E-07 1.259 -250 37633 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPPEPEAAPR [R].rPPEPEAAPR.[R] N-Term(TMT6plex) 3 P37889 Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 P37889-2; Q99K58; P37889 Isoform 2 of Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2; Fibulin 2 OS=Mus musculus OX=10090 GN=Fbln2 PE=2 SV=1; Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 0 3 3 0.6871 0 1 1 1 450.25623 1348.75412 1348.75346 0.49 0.00022 0/0 0 0 66445904 HCD 30 MS2 43.62016 446.4 14.912 42.0967 10461 10461 10460 QEplus033719.raw F4 671.4 264.3 469.1 492 338.8 442.7 434 4.25 1 FALSE 1.14E-05 1.06E-07 1.423 -250 37639 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGQQQAGGDGKTEQK [R].qGQQQAGGDGkTEQk.[G] N-Term(TMT6plex); K11(TMT6plex); K15(TMT6plex) 10 Q8C290 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1 Q8C290; Q8VEK3-2; Q3ULH5; Q3TVV6; Q3TXW2; Q3TGN5; O88568; Q3TWN5; Q3TS50; Q8VEK3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; B30.2/SPRY domain-containing protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Heterogenous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; B30.2/SPRY domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=1 SV=1 1 3 3 0.7043 0 1 1 1 749.74829 2247.23032 2247.22963 0.31 0.00023 0/0 0 0 18727486 HCD 30 MS2 5.336259 515.2 110 42.0992 10462 10462 10460 QEplus033719.raw F4 845.9 466.4 642.9 400 364.4 371.3 472 3.99 1 FALSE 1.14E-05 1.41E-15 2.918 -250 37647 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVVSGGR [K].vVVSGGR.[G] N-Term(TMT6plex) 1 Q99LC5 "Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Etfa PE=1 SV=2" Q99LC5 "Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Etfa PE=1 SV=2" 0 2 2 0.1574 0 1 1 1 451.78476 902.56224 902.56208 0.18 0.00008 0/0 0 0 93975944 HCD 30 MS2 9.321147 590.9 14.713 42.1014 10463 10463 10460 QEplus033719.raw F4 608.5 442 614.5 672.2 588.6 619.4 102 2.35 1 FALSE 0.0006574 0.01002 0.404 -250 37657 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQETPAAK [K].sQETPAAk.[K] N-Term(TMT6plex); K8(TMT6plex) 3 Q62189 U1 small nuclear ribonucleoprotein A OS=Mus musculus OX=10090 GN=Snrpa PE=1 SV=3 Q9CXX7; Q62189; D3Z0S6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Snrpa PE=2 SV=1; U1 small nuclear ribonucleoprotein A OS=Mus musculus OX=10090 GN=Snrpa PE=1 SV=3; U1 small nuclear ribonucleoprotein A (Fragment) OS=Mus musculus OX=10090 GN=Snrpa PE=1 SV=1 0 2 2 0.5399 0 1 1 1 645.37762 1289.74797 1289.74654 1.11 0.00072 0/0 0 0 9164267 HCD 30 MS2 9.194325 528.5 110 42.104 10464 10464 10460 QEplus033719.raw F4 835.3 461.1 610.7 363.7 440.7 459.2 454 2.63 1 FALSE 1.14E-05 0.0001544 0.821 -250 37663 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMEDETQK [R].rMEDETQk.[E] N-Term(TMT6plex); K8(TMT6plex) 2 Q8JZZ5 Phosphatidylinositol transfer protein beta isoform OS=Mus musculus OX=10090 GN=Pitpnb PE=1 SV=1 Q8JZZ5; P53811 Phosphatidylinositol transfer protein beta isoform OS=Mus musculus OX=10090 GN=Pitpnb PE=1 SV=1; Phosphatidylinositol transfer protein beta isoform OS=Mus musculus OX=10090 GN=Pitpnb PE=1 SV=2 1 3 3 0.5359 0 1 1 1 498.93924 1494.80317 1494.79865 3.02 0.00151 0/0 0 0 6092799 HCD 30 MS2 38.18059 628.7 110 42.1065 10465 10465 10460 QEplus033719.raw F4 728.9 469.6 670.3 619.9 723 560.3 352 3.06 1 FALSE 0.0005076 0.007968 0.44 -250 37670 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CNTCGQPITDR [K].cNTcGQPITDR.[M] N-Term(TMT6plex); C1(Carbamidomethyl); C4(Carbamidomethyl) 5 Q8CBM0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1 Q8CBM0; Q3TCR9; Q8CD55; Q62523; Q7TQE2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Zyxin OS=Mus musculus OX=10090 GN=Zyx PE=1 SV=2; Zyx protein OS=Mus musculus OX=10090 GN=Zyx PE=1 SV=1 0 2 2 0.6219 0 1 1 1 775.86609 1550.7249 1550.72528 -0.24 -0.00019 0/0 0 0 3426447 HCD 30 MS2 0 203.3 110 42.109 10466 10466 10460 QEplus033719.raw F4 215.3 216.2 229.3 159.7 209.2 190.1 56 3.65 1 FALSE 1.14E-05 3.67E-06 1.13 -250 37674 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGQQQAGGDGKTEQK [R].qGQQQAGGDGkTEQk.[G] N-Term(TMT6plex); K11(TMT6plex); K15(TMT6plex) 10 Q8C290 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1 Q8C290; Q8VEK3-2; Q3ULH5; Q3TVV6; Q3TXW2; Q3TGN5; O88568; Q3TWN5; Q3TS50; Q8VEK3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; B30.2/SPRY domain-containing protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Heterogenous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; B30.2/SPRY domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=1 SV=1 1 4 4 0.5867 0 1 1 1 562.56342 2247.23183 2247.22963 0.98 0.00055 0/0 0 0 10193709 HCD 30 MS2 3.422822 487.2 110 42.1115 10467 10467 10460 QEplus033719.raw F4 746.5 423.6 579.3 380.1 394.2 399.7 486 5.13 1 FALSE 1.14E-05 2.21E-08 1.552 -250 37682 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAEQAER [RK].lAEQAER.[Y] N-Term(TMT6plex) 19 P68510; P68254; A8IP69; Q9CQV8; P63101; P62259 14-3-3 protein eta OS=Mus musculus OX=10090 GN=Ywhah PE=1 SV=2;14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1;14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3;14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1;14-3-3 protein epsilon OS=Mus musculus OX=10090 GN=Ywhae PE=1 SV=1 Q8BJH3; P68510; P68254; D3YW45; O70456; A0A2I3BQ03; Q9CQV8-2; A8IP69; Q9CQV8; Q8BWN0; Q9JJ20; D3YXN6; A2A5N1; D3YXF4; D6REF3; P68254-2; P63101; P62259; Q8BPH1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ywhah PE=2 SV=1; 14-3-3 protein eta OS=Mus musculus OX=10090 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq PE=1 SV=1; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; 14-3-3 protein sigma OS=Mus musculus OX=10090 GN=Sfn PE=1 SV=2; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; Isoform Short of 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab; 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1; 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3; 14_3_3 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; 14-3-3 protein sigma OS=Mus musculus OX=10090 GN=Sfn PE=2 SV=1; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; 14-3-3 protein beta/alpha (Fragment) OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=1; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=8; 14-3-3 protein epsilon OS=Mus musculus OX=10090 GN=Ywhae PE=1 SV=1; Isoform 2 of 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq; 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; 14-3-3 protein epsilon OS=Mus musculus OX=10090 GN=Ywhae PE=1 SV=1; 14_3_3 domain-containing protein OS=Mus musculus OX=10090 GN=Ywhae PE=2 SV=1 0 2 2 0.13 0 1 1 1 523.29565 1045.58403 1045.58394 0.09 0.00005 0/0 0 0 5204748 HCD 30 MS2 26.30308 476.6 110 42.114 10468 10468 10460 QEplus033719.raw F4 486.7 383.8 481 414.6 564.4 529.2 223 2 6 FALSE 0.001886 0.03195 0.207 -250 37727 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNEEETTDDPRK [R].dNEEETTDDPRk.[L] N-Term(TMT6plex); K12(TMT6plex) 7 Q3UCF2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Cdc5l PE=1 SV=1 A0A1W2P7S8; Q3UCF2; Q05DT4; A0A1W2P7H4; A0A1W2P7Z8; A0A1W2P6Q8; A0A1W2P855 "Predicted gene, 32717 OS=Mus musculus OX=10090 GN=Gm32717 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cdc5l PE=1 SV=1; Cdc5l protein OS=Mus musculus OX=10090 GN=Cdc5l PE=2 SV=1; Predicted gene 9048 OS=Mus musculus OX=10090 GN=Gm9048 PE=3 SV=1; Predicted gene 9045 OS=Mus musculus OX=10090 GN=Gm9045 PE=3 SV=1; Predicted gene 9040 OS=Mus musculus OX=10090 GN=Gm9044 PE=3 SV=1; Predicted gene 9046 OS=Mus musculus OX=10090 GN=Gm9046 PE=3 SV=1" 1 3 3 0.7601 0 1 1 1 636.3186 1906.94126 1906.93944 0.96 0.00061 0/0 0 0 11565617 HCD 30 MS2 32.63316 447.8 110 42.1384 10477 10477 10471 QEplus033719.raw F4 438.2 417.6 462.9 344.9 541.6 481.4 143 3.21 1 FALSE 1.14E-05 6.15E-05 0.897 -250 37732 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIYENR [R].tIYENR.[I] N-Term(TMT6plex) 4 E9PY39 Predicted gene 20431 OS=Mus musculus OX=10090 GN=Gm20431 PE=3 SV=1 E9PY39; B7ZBY6; Q569Y6; B7ZBY7 Predicted gene 20431 OS=Mus musculus OX=10090 GN=Gm20431 PE=3 SV=1; Ubiquitin-conjugating enzyme E2 variant 1 (Fragment) OS=Mus musculus OX=10090 GN=Ube2v1 PE=4 SV=8; Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus musculus OX=10090 GN=Ube2v1 PE=2 SV=1; Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus musculus OX=10090 GN=Ube2v1 PE=4 SV=1 0 2 2 0.4919 0 1 1 1 512.7854 1024.56352 1024.56248 1.02 0.00052 0/0 0 0 6473810.5 HCD 30 MS2 29.03234 723.3 110 42.1409 10478 10478 10471 QEplus033719.raw F4 790.3 572.3 794.8 593.2 800 789.2 141 2.48 1 FALSE 0.003817 0.0722 0.082 -250 37762 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KMDAHPPR [K].kMDAHPPR.[L] N-Term(TMT6plex); K1(TMT6plex) 6 P13020-2; Q3SX14 Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn;TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin Q3UCW8; Q3U9Q8; P13020-2; Q3TGJ9; P13020; Q3SX14 Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Gelsolin OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=3; TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin 1 4 4 0.5604 0 1 1 1 353.20782 1409.80947 1409.80876 0.5 0.00018 0/0 0 0 32695076 HCD 30 MS2 24.8294 338.7 29.608 42.1557 10483 10483 10482 QEplus033719.raw F4 427.9 248.6 328.9 283.6 414.7 328.6 408 2.73 2 TRUE 1.14E-05 2.82E-05 0.962 -250 37770 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCGPCLR [R].gcGPcLR.[I] N-Term(TMT6plex); C2(Carbamidomethyl); C5(Carbamidomethyl) 5 A0A498WGD8 Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=1 A0A498WGD8; Q3UNH3; Q3UBF4; Q3U8R9; Q8CDN6 Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=1; PITH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Txnl1 PE=2 SV=1; PITH domain-containing protein OS=Mus musculus OX=10090 GN=Txnl1 PE=2 SV=1; PITH domain-containing protein OS=Mus musculus OX=10090 GN=Txnl1 PE=2 SV=1; Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3 0 2 2 0.5878 0 1 1 1 524.76544 1048.52361 1048.52294 0.64 0.00034 0/0 0 0 8955432 HCD 30 MS2 12.68981 618.5 110 42.1582 10484 10484 10482 QEplus033719.raw F4 645.8 541.9 652.4 473.8 738.8 658.1 82 1.48 1 FALSE 0.007237 0.1151 -0.032 -250 37773 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASESELER [K].aSESELER.[Q] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.4227 0 1 1 1 575.30011 1149.59294 1149.5949 -1.7 -0.00098 0/0 0 0 19682238 HCD 30 MS2 13.35927 938 102.15 42.1606 10485 10485 10482 QEplus033719.raw F4 1110.4 778.9 990.4 810.5 967 970.8 147 2.91 2 FALSE 1.14E-05 0.0002946 0.767 -250 37781 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STLPDADRER [K].sTLPDADRER.[E] N-Term(TMT6plex) 4 Q3ULT2 Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1 A0A1L1SV25; Q3UDJ7; Q3ULT2; Q1A602 Alpha-actinin-4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1 1 3 3 0.6349 0 1 1 1 463.58298 1388.73438 1388.73312 0.9 0.00042 0/0 0 0 18255158 HCD 30 MS2 56.77184 900 75.553 42.1629 10486 10486 10482 QEplus033719.raw F4 1016.7 761.1 1051.6 740.8 892.3 937.7 266 3.78 1 FALSE 1.14E-05 0.0001336 0.833 -250 37789 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CAEMVSNSR [R].cAEMVSNSR.[T] N-Term(TMT6plex); C1(Carbamidomethyl) 3 Q52KR3 Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2 PE=1 SV=2 Q52KR3-6; Q8CA96; Q52KR3 Isoform 6 of Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2; DHHA2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Prune2 PE=2 SV=1; Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2 PE=1 SV=2 0 2 2 0.6294 0 1 1 1 641.80804 1282.60881 1282.60812 0.54 0.00035 0/0 0 0 10214010 HCD 30 MS2 34.18053 559.4 110 42.1678 10488 10488 10482 QEplus033719.raw F4 590.3 455.2 592.1 524.1 598.6 596.3 65 2.86 1 FALSE 1.14E-05 0.0009219 0.669 -250 37796 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CLGNPER [K].cLGNPER.[E] N-Term(TMT6plex); C1(Carbamidomethyl) 2 P50516 V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a PE=1 SV=2 P50516; P50516-2 V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a PE=1 SV=2; Isoform 2 of V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a 0 2 2 0.4112 0 1 1 1 537.77905 1074.55083 1074.55634 -5.13 -0.00276 0/0 0 0 7631324 HCD 30 MS2 54.61777 1051.5 110 42.1702 10489 10489 10482 QEplus033719.raw F4 1341.6 861.6 1155.4 822.8 1010 1117.8 80 2.14 1 FALSE 0.00676 0.1073 -0.013 -250 37809 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDCDQHSDIAQR [R].vDcDQHSDIAQR.[Y] N-Term(TMT6plex); C3(Carbamidomethyl) 2 Q3URM4 Thioredoxin domain-containing protein OS=Mus musculus OX=10090 GN=Erp44 PE=2 SV=1 Q3URM4; Q9D1Q6 Thioredoxin domain-containing protein OS=Mus musculus OX=10090 GN=Erp44 PE=2 SV=1; Endoplasmic reticulum resident protein 44 OS=Mus musculus OX=10090 GN=Erp44 PE=1 SV=1 0 2 2 0.7277 0 1 1 1 836.89777 1672.78826 1672.79105 -1.67 -0.0014 0/0 0 0 4083817.75 HCD 30 MS2 0 151.1 110 42.1753 10491 10491 10482 QEplus033719.raw F4 149.3 133.4 173.4 141.7 155.4 153.4 58 4.04 1 FALSE 1.14E-05 2.49E-11 2.112 -250 37833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTVDCVQAR [K].gTVDcVQAR.[A] N-Term(TMT6plex); C5(Carbamidomethyl) 1 Q61823 Programmed cell death protein 4 OS=Mus musculus OX=10090 GN=Pdcd4 PE=1 SV=1 Q61823 Programmed cell death protein 4 OS=Mus musculus OX=10090 GN=Pdcd4 PE=1 SV=1 0 2 2 0.466 0 1 1 1 617.82458 1234.64189 1234.64114 0.61 0.00038 0/0 0 0 9082209 HCD 30 MS2 16.02205 499.7 110 42.1919 10497 10497 10493 QEplus033719.raw F4 487.4 577.9 486.8 430.8 573.8 441.4 220 3.09 1 FALSE 1.14E-05 4.39E-05 0.925 -250 37841 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STDEQLEEQR [K].sTDEQLEEQR.[R] N-Term(TMT6plex) 4 F7B6A4 Potassium channel tetramerisation domain-containing 17 (Fragment) OS=Mus musculus OX=10090 GN=Kctd17 PE=1 SV=1 F7C1U0; A0A2R8VHM0; F7B6A4; E0CYQ0 Potassium channel tetramerisation domain-containing 17 (Fragment) OS=Mus musculus OX=10090 GN=Kctd17 PE=1 SV=1; Potassium channel tetramerisation domain-containing 17 (Fragment) OS=Mus musculus OX=10090 GN=Kctd17 PE=1 SV=1; Potassium channel tetramerisation domain-containing 17 (Fragment) OS=Mus musculus OX=10090 GN=Kctd17 PE=1 SV=1; Potassium channel tetramerisation domain-containing 17 OS=Mus musculus OX=10090 GN=Kctd17 PE=1 SV=1 0 2 2 0.5865 0 1 1 1 732.36255 1463.71782 1463.71753 0.2 0.00014 0/0 0 0 5026966.5 HCD 30 MS2 0 189.5 110 42.1944 10498 10498 10493 QEplus033719.raw F4 199.5 193.4 191.6 122 272.5 158 130 3.7 1 FALSE 1.14E-05 2.39E-07 1.355 -250 37864 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGATPFHSR [R].eGATPFHSR.[V] N-Term(TMT6plex) 1 O35316 Sodium- and chloride-dependent taurine transporter OS=Mus musculus OX=10090 GN=Slc6a6 PE=1 SV=2 O35316 Sodium- and chloride-dependent taurine transporter OS=Mus musculus OX=10090 GN=Slc6a6 PE=1 SV=2 0 3 3 0.595 0 1 1 1 410.88632 1230.64441 1230.64285 1.27 0.00052 0/0 0 0 11544243 HCD 30 MS2 42.17262 447.2 85.304 42.2017 10501 10501 10493 QEplus033719.raw F4 584 282.7 423.8 454.5 420.1 518.2 175 4 1 FALSE 1.14E-05 5.66E-05 0.904 -250 37874 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAADVHEVR [R].kAADVHEVR.[K] N-Term(TMT6plex); K1(TMT6plex) 2 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm 1 4 4 0.6607 0 1 1 1 371.47537 1482.87966 1482.87928 0.25 0.00009 0/0 0 0 7051816 HCD 30 MS2 42.09718 448.7 110 42.2067 10503 10503 10493 QEplus033719.raw F4 460.5 370.1 485.4 416.6 542 417.5 317 3.36 2 FALSE 1.14E-05 3.13E-05 0.953 -250 37881 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQQGQELKR [K].dQQGQELkR.[D] N-Term(TMT6plex); K8(TMT6plex) 6 E9Q0A7 Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=1 Q4KMM3-2; Q4KMM3-4; Q4KMM3-3; E9Q0A7; A0A2R8W6N3; Q4KMM3 Isoform 2 of Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1; Isoform 4 of Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1; Isoform 3 of Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1; Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=1; Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=1; Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=3 1 3 3 0.4224 0 1 1 1 520.63513 1559.89084 1559.89058 0.17 0.00009 0/0 0 0 9115146 HCD 30 MS2 52.15755 771 110 42.214 10505 10505 10504 QEplus033719.raw F4 762.2 700.7 831.9 666 846.3 819.1 440 3.22 1 FALSE 1.14E-05 0.0002608 0.777 -250 37888 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DADDQKPGPSER [K].dADDQkPGPSER.[S] N-Term(TMT6plex); K6(TMT6plex) 2 D3YXK2 Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=2 D3YXK2; S4R1M2 Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=2; Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=1 0 3 3 0.4828 0 1 1 1 591.64319 1772.91501 1772.91791 -1.64 -0.00097 0/0 0 0 10814212 HCD 30 MS2 23.44008 634.6 110 42.2165 10506 10506 10504 QEplus033719.raw F4 766.5 403.6 590.4 829.5 560.8 656.9 256 2.9 1 FALSE 1.14E-05 9.34E-05 0.863 -250 37895 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATTLAER [K].aTTLAER.[S] N-Term(TMT6plex) 9 Q3TWG9; A0A140LHR4 Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1;Serpin H1 (Fragment) OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=1 A0A140LHK0; Q8BVU9; Q3TJK3; Q3TWG9; Q8BV87; Q3TMD2; A0A140LHR4; A0A140LHD6; P19324 Serpin H1 (Fragment) OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Serpin H1 (Fragment) OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=1; Serpin H1 (Fragment) OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=1; Serpin H1 OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=3 0 2 2 0.5357 0 1 1 1 495.79276 990.57823 990.57813 0.11 0.00005 0/0 0 0 33721732 HCD 30 MS2 24.14485 839.9 48.371 42.2187 10507 10507 10504 QEplus033719.raw F4 849.9 725.2 856.9 677.4 1108.3 821.4 136 2.24 2 FALSE 0.0006294 0.009526 0.412 -250 37905 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDMDLRR [K].sDMDLRR.[T] N-Term(TMT6plex) 4 P61164; Q8R5C5 Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1;Beta-centractin OS=Mus musculus OX=10090 GN=Actr1b PE=1 SV=1 P61164; Q8R1B2; Q8R5C5; A0A494BB86 Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1; Actr1b protein (Fragment) OS=Mus musculus OX=10090 GN=Actr1b PE=2 SV=1; Beta-centractin OS=Mus musculus OX=10090 GN=Actr1b PE=1 SV=1; Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1 1 3 3 0.4185 0 1 1 1 374.53622 1121.59412 1121.59346 0.59 0.00022 0/0 0 0 18638484 HCD 30 MS2 33.47466 531.2 56.834 42.221 10508 10508 10504 QEplus033719.raw F4 569.9 440.8 564.7 399.6 676.5 535.5 162 2.7 2 FALSE 0.001108 0.01462 0.337 -250 37928 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVDYEGGGCR [K].gVDYEGGGcR.[F] N-Term(TMT6plex); C9(Carbamidomethyl) 1 Q9R0E1 Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Mus musculus OX=10090 GN=Plod3 PE=1 SV=1 Q9R0E1 Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Mus musculus OX=10090 GN=Plod3 PE=1 SV=1 0 2 2 0.7307 0 1 1 1 649.80371 1298.60015 1298.59967 0.37 0.00024 0/0 0 0 8587689 HCD 30 MS2 5.01044 555.1 110 42.2305 10512 10512 10504 QEplus033719.raw F4 536.2 527.8 603.2 467.7 683.8 512 38 3.75 1 FALSE 1.14E-05 1.32E-06 1.214 -250 37935 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIHQQLCDR [K].qIHQQLcDR.[H] N-Term(TMT6plex); C7(Carbamidomethyl) 1 Q8BYA0 Tubulin-specific chaperone D OS=Mus musculus OX=10090 GN=Tbcd PE=1 SV=1 Q8BYA0 Tubulin-specific chaperone D OS=Mus musculus OX=10090 GN=Tbcd PE=1 SV=1 0 3 3 0.6382 0 1 1 1 476.25211 1426.74176 1426.74225 -0.34 -0.00016 0/0 0 0 8036108 HCD 30 MS2 61.81772 709.5 110 42.233 10513 10513 10504 QEplus033719.raw F4 769.6 480.9 921.2 630.2 656.5 798.4 176 3.98 1 FALSE 1.14E-05 0.0001092 0.85 -250 37953 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVECPPPR [K].aVEcPPPR.[T] N-Term(TMT6plex); C4(Carbamidomethyl) 5 Q8CFK5 Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1 Q8CFK5; Q8C292; Q8C1V4; Q8R2P8; Q3TIV6 Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=1 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=1 SV=1 0 2 2 0.6856 0 1 1 1 577.81268 1154.61809 1154.61894 -0.74 -0.00043 0/0 0 0 24797660 HCD 30 MS2 27.46329 831.7 110 42.2428 10516 10516 10515 QEplus033719.raw F4 865.9 690.6 883.1 623.2 980.8 946.8 178 2.64 1 FALSE 5.44E-05 0.002523 0.576 -250 37961 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRPENPKPQDGK [R].rRPENPkPQDGk.[E] N-Term(TMT6plex); K7(TMT6plex); K12(TMT6plex) 6 Q810K5 Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 A2BGG7; Q810K5; Q8BRJ5; P62960; Q71V06; Q60951 Y-box-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=1; Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Y-box-binding protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=3; Y box transcription factor (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1b OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 1 3 3 0.566 0 1 1 1 703.75494 2109.25028 2109.24958 0.33 0.00023 0/0 0 0 2906530.25 HCD 30 MS2 16.08862 106 110 42.2453 10517 10517 10515 QEplus033719.raw F4 112.4 88.3 115.4 81.2 126 112.4 330 2.65 1 FALSE 3.35E-05 0.001402 0.632 -250 37978 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERQESLK [K].eRQESLk.[S] N-Term(TMT6plex); K7(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 1 3 3 0.05 0 1 1 1 449.93839 1347.8006 1347.79963 0.72 0.00032 0/0 0 0 141252160 HCD 30 MS2 17.3308 523.4 8.579 42.2499 10519 10519 10515 QEplus033719.raw F4 858.9 231.1 540.1 620.8 361.7 527.9 494 2.4 1 FALSE 0.005254 0.08961 0.035 -250 37987 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EREMAEMR [K].eREMAEMR.[A] N-Term(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 1 3 3 0.3908 0 1 1 1 427.54816 1280.62992 1280.62886 0.83 0.00035 0/0 0 0 77335792 HCD 30 MS2 9.509634 395.2 16.631 42.2521 10520 10520 10515 QEplus033719.raw F4 430.3 361.6 417.5 285.5 473.7 402.6 113 3.48 1 FALSE 1.14E-05 0.0008525 0.676 -250 38001 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AATQASSTESCDK [R].aATQASSTEScDk.[H] N-Term(TMT6plex); C11(Carbamidomethyl); K13(TMT6plex) 1 Q61033 "Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4" Q61033 "Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4" 0 3 3 0.8004 0 1 1 1 605.30548 1813.90189 1813.90021 0.92 0.00056 0/0 0 0 11480577 HCD 30 MS2 32.6064 587.4 110 42.2569 10522 10522 10515 QEplus033719.raw F4 726.6 536.1 591.9 356 674.1 639.6 165 5.31 1 FALSE 1.14E-05 2.03E-10 1.938 -250 38008 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EREMAEMR [K].eREMAEMR.[A] N-Term(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 1 2 2 0.3571 0 1 1 1 640.8186 1280.62993 1280.62886 0.84 0.00054 0/0 0 0 10708969 HCD 30 MS2 35.14071 390.1 110 42.2594 10523 10523 10515 QEplus033719.raw F4 438 343.7 400.2 331.5 433.6 393.8 113 2.38 1 FALSE 0.001343 0.0189 0.291 -250 38021 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTSSQSQGDAAPESTK [R].nTSSQSQGDAAPESTk.[H] N-Term(TMT6plex); K16(TMT6plex) 1 Q8C3Y4 Kinetochore-associated protein 1 OS=Mus musculus OX=10090 GN=Kntc1 PE=1 SV=2 Q8C3Y4 Kinetochore-associated protein 1 OS=Mus musculus OX=10090 GN=Kntc1 PE=1 SV=2 0 3 3 0.709 0 1 1 1 689.35181 2066.04087 2066.04021 0.32 0.00022 0/0 0 0 1674450.5 HCD 30 MS2 0 98.3 110 42.2644 10525 10525 10515 QEplus033719.raw F4 112.1 90.1 95.6 63.9 148.6 79.5 267 5.36 1 FALSE 1.14E-05 5.56E-12 2.235 -250 38028 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYVTTSTR [R].sYVTTSTR.[T] N-Term(TMT6plex) 9 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; Q3TWV0; A2AKJ2; Q3U6S1; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.6438 0 1 1 1 572.31464 1143.622 1143.62072 1.12 0.00064 0/0 0 0 448180832 HCD 30 MS2 5.047708 412.7 2.934 42.2717 10527 10527 10526 QEplus033719.raw F4 345.2 469.7 475.9 273.8 550.7 360.9 181 2.92 2 FALSE 0.0002719 0.00539 0.492 -250 38046 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTDPVPDPR [K].hTDPVPDPR.[A] N-Term(TMT6plex) 5 O55143-2; O55143; Q8R429 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 O55143-2; O55143; Q5DTI2; O54994; Q8R429 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; Sarcoplasmic reticulum Ca2+-ATPase (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 0 3 3 0.662 0 1 1 1 421.56155 1262.67011 1262.66907 0.83 0.00035 0/0 0 0 91599472 HCD 30 MS2 32.7155 334.2 10.863 42.2762 10529 10529 10526 QEplus033719.raw F4 501.1 178.4 297 373.3 274.2 381 243 2.87 3 FALSE 0.0004091 0.007404 0.45 -250 38056 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQSDVMR [K].kQSDVMR.[F] N-Term(TMT6plex); K1(TMT6plex) 3 Q5M8Q0 Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1 Q5M8Q0; Q3U7D2; B8JKK2 Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1; Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1; Ribosomal protein L15 (Fragment) OS=Mus musculus OX=10090 GN=Rpl15 PE=1 SV=1 1 3 3 0.533 0 1 1 1 441.26047 1321.76685 1321.76623 0.47 0.00021 0/0 0 0 51480100 HCD 30 MS2 16.75676 653.5 27.107 42.2785 10530 10530 10526 QEplus033719.raw F4 898.4 426.8 661.6 699 616.8 618.4 418 2.12 1 FALSE 0.001142 0.01539 0.328 -250 38073 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAFTDNER [K].gAFTDNER.[I] N-Term(TMT6plex) 3 Q8K411 "Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1 PE=1 SV=1" Q8K411-2; Q8K411-3; Q8K411 "Isoform 2 of Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1; Isoform 3 of Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1; Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1 PE=1 SV=1" 0 2 2 0.5936 0 1 1 1 569.78882 1138.57036 1138.56902 1.18 0.00067 0/0 0 0 36412604 HCD 30 MS2 5.769007 727.6 64.113 42.283 10532 10532 10526 QEplus033719.raw F4 683.5 680.2 860 612 759.7 770 94 2.83 1 FALSE 1.14E-05 0.0002754 0.773 -250 38082 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CLGNPER [K].cLGNPER.[E] N-Term(TMT6plex); C1(Carbamidomethyl) 2 P50516 V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a PE=1 SV=2 P50516; P50516-2 V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a PE=1 SV=2; Isoform 2 of V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a 0 2 2 0.5208 0 1 1 1 537.78192 1074.55657 1074.55634 0.21 0.00011 0/0 0 0 23542150 HCD 30 MS2 17.69381 805.7 73.228 42.2853 10533 10533 10526 QEplus033719.raw F4 851.4 656.7 909.6 721.9 792.6 901.7 120 2.4 1 FALSE 0.0006966 0.01013 0.402 -250 38085 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STLPDADRER [K].sTLPDADRER.[E] N-Term(TMT6plex) 4 Q3ULT2 Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1 A0A1L1SV25; Q3UDJ7; Q3ULT2; Q1A602 Alpha-actinin-4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1 1 2 2 0.6053 0 1 1 1 694.87079 1388.7343 1388.73312 0.85 0.00059 0/0 0 0 22157014 HCD 30 MS2 9.360423 320.4 110 42.2878 10534 10534 10526 QEplus033719.raw F4 323.9 320.8 365.7 226.5 398.7 286.5 266 3.75 1 FALSE 1.14E-05 9.24E-06 1.054 -250 38095 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTDPVPDPR [K].hTDPVPDPR.[A] N-Term(TMT6plex) 5 O55143-2; O55143; Q8R429 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 O55143-2; O55143; Q5DTI2; O54994; Q8R429 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; Sarcoplasmic reticulum Ca2+-ATPase (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 0 2 2 0.6353 0 1 1 1 631.83838 1262.66948 1262.66907 0.33 0.00021 0/0 0 0 12415208 HCD 30 MS2 32.60545 508.3 110 42.2996 10538 10538 10537 QEplus033719.raw F4 597.3 242.6 453.9 741.2 370.1 644.5 256 2.55 3 FALSE 0.0001504 0.003471 0.543 -250 38099 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEYAQQR [K].vEYAQQR.[W] N-Term(TMT6plex) 3 Q9JJR8 Transmembrane protein 9B OS=Mus musculus OX=10090 GN=Tmem9b PE=1 SV=1 Q9JJR8; Q3UI08; D3Z6W5 Transmembrane protein 9B OS=Mus musculus OX=10090 GN=Tmem9b PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmem9b PE=2 SV=1; Transmembrane protein 9B OS=Mus musculus OX=10090 GN=Tmem9b PE=1 SV=1 0 2 2 0.4701 0 1 1 1 561.80792 1122.60857 1122.61049 -1.71 -0.00096 0/0 0 0 8381978 HCD 30 MS2 53.9286 804.6 110 42.3021 10539 10539 10537 QEplus033719.raw F4 1051.9 610.1 841.1 553.9 861.7 908.7 206 2.68 1 FALSE 0.002258 0.04445 0.159 -250 38118 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMACVGR [RK].gMAcVGR.[T] N-Term(TMT6plex); C4(Carbamidomethyl) 4 Q7TMI3; Q8VDF2 E3 ubiquitin-protein ligase UHRF2 OS=Mus musculus OX=10090 GN=Uhrf2 PE=1 SV=1;E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus OX=10090 GN=Uhrf1 PE=1 SV=2 Q7TMI3; Q8VDF2-2; Q7TMI3-2; Q8VDF2 E3 ubiquitin-protein ligase UHRF2 OS=Mus musculus OX=10090 GN=Uhrf2 PE=1 SV=1; Isoform 2 of E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus OX=10090 GN=Uhrf1; Isoform 2 of E3 ubiquitin-protein ligase UHRF2 OS=Mus musculus OX=10090 GN=Uhrf2; E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus OX=10090 GN=Uhrf1 PE=1 SV=2 0 2 2 0.4218 0 1 1 1 490.25485 979.50243 979.50147 0.98 0.00048 0/0 0 0 6448089 HCD 30 MS2 10.76048 652 110 42.3091 10542 10542 10537 QEplus033719.raw F4 660.5 499.4 612.5 468.8 1009.5 661.4 121 2.11 2 FALSE 0.00165 0.02688 0.233 -250 38136 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPPSEEDSAEAER [R].tPPSEEDSAEAER.[L] N-Term(TMT6plex) 4 Q8BJU0 Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=2 Q8BJU0; A0A1W2P6P1; A0A1W2P7I5; Q8BJU0-2 Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=2; Small glutamine-rich tetratricopeptide repeat-containing protein alpha (Fragment) OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=1; Small glutamine-rich tetratricopeptide repeat-containing protein alpha (Fragment) OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=1; Isoform 2 of Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus OX=10090 GN=Sgta 0 2 2 0.7702 0 1 1 1 823.89056 1646.77385 1646.77069 1.92 0.00158 0/0 0 0 3116715.25 HCD 30 MS2 0 161.3 110 42.3141 10544 10544 10537 QEplus033719.raw F4 166.3 114.2 183.2 163.3 141.9 199.1 59 3.83 1 FALSE 1.14E-05 2.46E-08 1.543 -250 38142 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGIHEDSTNRR [K].lGIHEDSTNRR.[R] N-Term(TMT6plex) 4 Q71LX8 Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q811H6; Q80YC2; Q71LX8; E9Q0C3 Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; Heat shock protein HSP 90-beta (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 1 2 2 0.6407 0 1 1 1 763.91608 1526.82488 1526.82367 0.79 0.0006 0/0 0 0 2073938.75 HCD 30 MS2 27.91071 92.2 110 42.3167 10545 10545 10537 QEplus033719.raw F4 94.7 70.4 98.1 88.5 116.2 85.4 341 3.59 1 FALSE 1.14E-05 8.69E-07 1.249 -250 38151 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQEQIAK [K].rQEQIAk.[R] N-Term(TMT6plex); K7(TMT6plex) 3 Q5BLK1 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1 Q3TL53; Q5BLK1; Q8BT09 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1 1 3 3 0.2804 0 1 1 1 444.27844 1330.82077 1330.8207 0.05 0.00002 0/0 0 0 30840822 HCD 30 MS2 68.29287 789.9 35.225 42.3189 10546 10546 10537 QEplus033719.raw F4 1372.6 456.3 836.6 829.8 495.6 748.4 496 3.78 1 FALSE 1.14E-05 7.39E-05 0.882 -250 38159 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNVVVGR [R].gNVVVGR.[D] N-Term(TMT6plex) 2 Q6PG98 Ferredoxin--NADP(+) reductase (Fragment) OS=Mus musculus OX=10090 GN=Fdxr PE=2 SV=1 Q6PG98; Q6IQY0 "Ferredoxin--NADP(+) reductase (Fragment) OS=Mus musculus OX=10090 GN=Fdxr PE=2 SV=1; NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Mus musculus OX=10090 GN=Fdxr PE=2 SV=1" 0 2 2 0.2452 0 1 1 1 465.29059 929.5739 929.57298 0.99 0.00046 0/0 0 0 27920408 HCD 30 MS2 57.70207 671 30.766 42.3212 10547 10547 10537 QEplus033719.raw F4 683 580.1 763.2 595.2 696.6 708.1 64 2.08 1 FALSE 0.0009259 0.01266 0.364 -250 38174 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDGNEEDKENQGDETQGQQPPQRR [R].eDGNEEDkENQGDETQGQQPPQRR.[Y] N-Term(TMT6plex); K8(TMT6plex) 6 Q810K5 Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 A2BGG7; Q810K5; Q8BRJ5; P62960; Q71V06; Q60951 Y-box-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=1; Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Y-box-binding protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=3; Y box transcription factor (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1b OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 2 4 4 0.7863 0 1 1 1 811.38885 3242.53359 3242.53102 0.79 0.00064 0/0 0 0 20034000 HCD 30 MS2 1.729948 270.2 110 42.331 10550 10550 10548 QEplus033719.raw F4 267.7 265.2 293.4 183.8 333 278.3 134 5.71 1 FALSE 1.14E-05 2.38E-13 2.495 -250 38181 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THICVTR [K].tHIcVTR.[A] N-Term(TMT6plex); C4(Carbamidomethyl) 2 P51174 "Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=2" A0A0R4J083; P51174 "Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=1; Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=2" 0 3 3 0.5782 0 1 1 1 372.5448 1115.61985 1115.61928 0.51 0.00019 0/0 0 0 66308504 HCD 30 MS2 20.34287 267.8 17.305 42.3333 10551 10551 10548 QEplus033719.raw F4 315.6 198.6 267.9 282.2 248.2 294 214 3.39 1 FALSE 0.0008805 0.0122 0.37 -250 38196 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVQEAER [R].mVQEAER.[Y] N-Term(TMT6plex) 13 B7U582; P17879 Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1;Heat shock 70 kDa protein 1B OS=Mus musculus OX=10090 GN=Hspa1b PE=1 SV=3 Q9QWU1; O88688; Q61696; Q3TAI8; B7U582; A1E2B8; P16627; B2CSK2; Q91ZU5; P17879; Q91ZU4; P17156; Q61698 Hsc70t (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Heat shock protein 70 (Fragment) OS=Mus musculus OX=10090 GN=Hsp70.3 PE=3 SV=1; Heat shock 70 kDa protein 1A OS=Mus musculus OX=10090 GN=Hspa1a PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1; Inducible heat shock protein 70 OS=Mus musculus OX=10090 PE=3 SV=1; Heat shock 70 kDa protein 1-like OS=Mus musculus OX=10090 GN=Hspa1l PE=1 SV=4; Heat shock protein 1-like protein OS=Mus musculus OX=10090 PE=3 SV=1; Heat shock protein Hsc70t (Fragment) OS=Mus musculus OX=10090 GN=Hsc70t PE=3 SV=1; Heat shock 70 kDa protein 1B OS=Mus musculus OX=10090 GN=Hspa1b PE=1 SV=3; Heat shock protein Hsc70t (Fragment) OS=Mus musculus OX=10090 GN=Hsc70t PE=3 SV=1; Heat shock-related 70 kDa protein 2 OS=Mus musculus OX=10090 GN=Hspa2 PE=1 SV=2; Heat shock protein (hsp68) (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.4401 0 1 1 1 546.29028 1091.57329 1091.57166 1.49 0.00081 0/0 0 0 32591454 HCD 30 MS2 2.526967 823.8 52.457 42.34 10554 10554 10548 QEplus033719.raw F4 804.6 819.4 857.8 620.6 1000.6 839.9 242 2.84 2 FALSE 0.0006126 0.009061 0.42 -250 38220 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STCYGGYR [R].sTcYGGYR.[R] N-Term(TMT6plex); C3(Carbamidomethyl) 3 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q60784 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Fibrillin-1 (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1 0 2 2 0.36 0 1 1 1 596.78479 1192.5623 1192.56182 0.4 0.00024 0/0 0 0 14923441 HCD 30 MS2 24.4211 741.7 110 42.3495 10558 10558 10548 QEplus033719.raw F4 704 523.6 868.7 1005.4 496.6 851.9 36 2.25 1 FALSE 3.35E-05 0.001389 0.633 -250 38228 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLETSCSDTR [R].dLETScSDTR.[Q] N-Term(TMT6plex); C6(Carbamidomethyl) 8 E9Q586 Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1 E9Q3M3; E9Q586; O08788-2; D3YX34; Q3T9V8; O08788; Q6NZM3; Q3TB96 Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Isoform 2 of Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=3; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1 0 2 2 0.7068 0 1 1 1 706.83014 1412.653 1412.65249 0.36 0.00026 0/0 0 0 16576346 HCD 30 MS2 0 383.9 110 42.3569 10560 10560 10559 QEplus033719.raw F4 385 321.4 419.6 320 450.6 406.8 37 3.65 1 FALSE 1.14E-05 1.66E-06 1.196 -250 38234 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPQSPVSR [R].tPQSPVSR.[I] N-Term(TMT6plex) 1 Q6P9Q4 FH1/FH2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Fhod1 PE=1 SV=3 Q6P9Q4 FH1/FH2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Fhod1 PE=1 SV=3 0 2 2 0.3246 0 1 1 1 550.81714 1100.627 1100.62614 0.78 0.00043 0/0 0 0 10948776 HCD 30 MS2 20.54156 523.4 110 42.3594 10561 10561 10559 QEplus033719.raw F4 602.5 438 532.3 364.8 698.6 504.5 261 2.28 1 FALSE 0.0002518 0.005238 0.496 -250 38241 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGIHEDSTNRR [K].lGIHEDSTNRR.[R] N-Term(TMT6plex) 4 Q71LX8 Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q811H6; Q80YC2; Q71LX8; E9Q0C3 Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; Heat shock protein HSP 90-beta (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 1 4 4 0.4913 0 1 1 1 382.46146 1526.824 1526.82367 0.21 0.00008 0/0 0 0 63201888 HCD 30 MS2 39.26482 287.8 10.9 42.3616 10562 10562 10559 QEplus033719.raw F4 314.6 226.4 294.3 245.1 361.8 284.4 311 2.89 1 FALSE 2.26E-05 0.001083 0.655 -250 38268 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVDPETQAR [R].tVDPETQAR.[L] N-Term(TMT6plex) 11 E9Q804; E9Q1M6 Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=3;Ankyrin repeat and KH domain-containing 1 OS=Mus musculus OX=10090 GN=Ankhd1 PE=1 SV=1 E9Q804; Q99NH0-2; E9Q1M6; E9PUR0; A0A0G2JDZ9; A0A1W2P6X1; Q6KAP1; Q99NH0; F7C545; Q99NH0-3; E9QKG6 Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=3; Isoform 2 of Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17; Ankyrin repeat and KH domain-containing 1 OS=Mus musculus OX=10090 GN=Ankhd1 PE=1 SV=1; Ankyrin repeat and KH domain-containing 1 OS=Mus musculus OX=10090 GN=Ankhd1 PE=1 SV=1; Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=1; Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=1; MFLJ00246 protein (Fragment) OS=Mus musculus OX=10090 GN=mFLJ00246 PE=4 SV=1; Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=2; Ankyrin repeat and KH domain-containing 1 (Fragment) OS=Mus musculus OX=10090 GN=Ankhd1 PE=1 SV=1; Isoform 3 of Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17; Ankyrin repeat domain-containing protein 17 OS=Mus musculus OX=10090 GN=Ankrd17 PE=1 SV=1 0 2 2 0.4431 0 1 1 1 623.33704 1245.6668 1245.66365 2.53 0.00157 0/0 0 0 10790932 HCD 30 MS2 0 522 110 42.3709 10566 10566 10559 QEplus033719.raw F4 598.7 449.4 575.1 337.4 622.7 548.5 240 3.25 2 FALSE 1.14E-05 1.93E-05 0.993 -250 38283 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEVEQQSR [K].mEVEQQSR.[R] N-Term(TMT6plex) 14 A0A4Y5WWJ7 Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1 E9Q405; Q9JMH9-6; A0A1C7ZN10; E9QAX2; Q9JMH9-5; Q9JMH9-4; Q9JMH9-1; B2RRE2; A0A4Y5WWJ7; Q9JMH9-2; K3W4L0; Q9JMH9-7; Q9JMH9; E9QA74 Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 6 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 5 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Isoform 4 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Isoform 1 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Myo18a protein OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1; Isoform 2 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 7 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=2; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1 0 2 2 0.5135 0 1 1 1 618.31506 1235.62285 1235.62515 -1.86 -0.00115 0/0 0 0 4405069 HCD 30 MS2 0 475.1 110 42.3781 10569 10569 10559 QEplus033719.raw F4 639.1 267.1 474.1 421.7 452.6 596.1 129 2.96 1 FALSE 5.44E-05 0.001893 0.604 -250 38292 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGIPPDQQR [K].eGIPPDQQR.[LV] N-Term(TMT6plex) 18 P62984; P62983 Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2;Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2 E9Q5F6; P62984; Q922Z8; Q922B0; Q3TH47; Q5SX22; E9Q4P0; P62983; Q78XY9; E9Q9J0; Q8R0Z9; B0LAC2; Q8C2K3; Q8VC46; A5JUZ1; A0A0A6YW67; E9QNP0; P0CG50 Polyubiquitin-C (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=1; Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Polyubiquitin-B (Fragment) OS=Mus musculus OX=10090 GN=Ubb PE=4 SV=2; KxDL motif-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2; Ubiquitin B OS=Mus musculus OX=10090 GN=Ubb PE=2 SV=1; 60S ribosomal protein L40 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=3 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiquitin A-52 residue ribosomal protein fusion product 1 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubb-ps PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiqutin subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Predicted pseudogene 8797 OS=Mus musculus OX=10090 GN=Gm8797 PE=4 SV=1; 60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Polyubiquitin-C OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=2 0 2 2 1 0 1 1 1 634.84375 1268.68022 1268.67963 0.47 0.0003 0/0 0 0 39225016 HCD 30 MS2 19.48562 563.2 59.827 42.3855 10571 10571 10570 QEplus033719.raw F4 581.6 424.7 601.6 509.1 552.9 709.6 289 2.84 2 FALSE 0.0003211 0.006303 0.472 -250 38293 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPQVQQPPPSNR [R].gPQVQQPPPSNR.[F] N-Term(TMT6plex) 3 E9Q1S3 Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23a PE=1 SV=1 E9Q1S3; Q8C1E4; Q01405 Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23a PE=1 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23a PE=2 SV=1; Protein transport protein Sec23A OS=Mus musculus OX=10090 GN=Sec23a PE=1 SV=2 0 2 2 0.6101 0 1 1 1 767.42169 1533.83611 1533.83351 1.7 0.0013 0/0 0 0 3812885.5 HCD 30 MS2 0 110.2 110 42.388 10572 10572 10570 QEplus033719.raw F4 109.6 94.4 121 89.7 123.7 122.7 348 3.36 1 FALSE 1.14E-05 4.80E-07 1.298 -250 38300 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIVEHAR [R].vIVEHAR.[G] N-Term(TMT6plex) 5 Q542V3; Q3TWW8 Serine/arginine-rich-splicing factor 4 OS=Mus musculus OX=10090 GN=Srsf4 PE=1 SV=1;Serine/arginine-rich splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1 Q542V3; A0A0A6YXX6; Q8VE97; Q3TWW8; Q8K3A8 Serine/arginine-rich-splicing factor 4 OS=Mus musculus OX=10090 GN=Srsf4 PE=1 SV=1; Serine/arginine-rich-splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1; Serine/arginine-rich splicing factor 4 OS=Mus musculus OX=10090 GN=Srsf4 PE=2 SV=1; Serine/arginine-rich splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1; Sfrs4 protein OS=Mus musculus OX=10090 GN=Srsf4 PE=2 SV=1 0 3 3 0.699 0 1 1 1 351.55219 1052.642 1052.64139 0.58 0.0002 0/0 0 0 113826608 HCD 30 MS2 3.285505 126.5 11.096 42.3902 10573 10573 10570 QEplus033719.raw F4 129.6 130.5 132.1 83 152 131.9 43 2.99 2 FALSE 0.0008718 0.01213 0.371 -250 38310 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REVENSEDPK [K].rEVENSEDPk.[F] N-Term(TMT6plex); K10(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 1 3 3 0.5756 0 1 1 1 554.302 1660.89145 1660.89063 0.49 0.00027 0/0 0 0 56358388 HCD 30 MS2 18.87175 685 34.772 42.3925 10574 10574 10570 QEplus033719.raw F4 789.4 517.8 678 509.6 875.1 740.3 375 4.5 1 FALSE 1.14E-05 1.42E-10 1.968 -250 38317 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGCVDTR [R].vGcVDTR.[S] N-Term(TMT6plex); C3(Carbamidomethyl) 2 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 0 2 2 0.4375 0 1 1 1 518.27625 1035.54521 1035.54545 -0.22 -0.00012 0/0 0 0 34029724 HCD 30 MS2 19.2857 788.6 45.982 42.3948 10575 10575 10570 QEplus033719.raw F4 879.1 516.2 855.1 1001.4 501.3 978.4 139 2.56 1 FALSE 0.001293 0.01763 0.303 -250 38326 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAEYVSAR [R].gAEYVSAR.[E] N-Term(TMT6plex) 2 G5E866 Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1 G5E866; Q99NB9 Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1; Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1 0 2 2 0.4196 0 1 1 1 541.29572 1081.58415 1081.58394 0.2 0.00011 0/0 0 0 22960692 HCD 30 MS2 50.6359 1190.4 58.935 42.397 10576 10576 10570 QEplus033719.raw F4 1124.7 1255.6 1387.6 868.6 1333.7 1172.5 127 2.55 1 FALSE 0.0002218 0.004656 0.51 -250 38336 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THICVTR [K].tHIcVTR.[A] N-Term(TMT6plex); C4(Carbamidomethyl) 2 P51174 "Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=2" A0A0R4J083; P51174 "Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=1; Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=2" 0 2 2 0.5208 0 1 1 1 558.31323 1115.61919 1115.61928 -0.08 -0.00005 0/0 0 0 17766764 HCD 30 MS2 37.84235 509.2 98.008 42.3993 10577 10577 10570 QEplus033719.raw F4 483.5 376.9 526.1 569 456.8 642.7 208 2.4 1 FALSE 0.002166 0.04114 0.17 -250 38343 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YTDVSTR [R].yTDVSTR.[Y] N-Term(TMT6plex) 2 Q9D710 Thioredoxin-related transmembrane protein 2 OS=Mus musculus OX=10090 GN=Tmx2 PE=1 SV=1 Q9D710; D3Z2J6 Thioredoxin-related transmembrane protein 2 OS=Mus musculus OX=10090 GN=Tmx2 PE=1 SV=1; Thioredoxin domain-containing protein 14 OS=Mus musculus OX=10090 GN=Tmx2 PE=1 SV=1 0 2 2 0.589 0 1 1 1 535.78772 1070.56816 1070.56795 0.19 0.0001 0/0 0 0 17554300 HCD 30 MS2 18.72175 825.3 110 42.4018 10578 10578 10570 QEplus033719.raw F4 785 608.1 858.9 880.2 843.1 976.3 72 2.36 1 FALSE 0.002166 0.04125 0.17 -250 38348 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPGAGPGVGGPSR [R].gPGAGPGVGGPSR.[G] N-Term(TMT6plex) 4 Q99K41 EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1 Q3UUU0; Q99K41; Q3U254; Q3USG5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; C1q domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1 0 2 2 0.7306 0 1 1 1 647.85767 1294.70806 1294.70651 1.19 0.00077 0/0 0 0 10440505 HCD 30 MS2 15.48266 573.4 110 42.4043 10579 10579 10570 QEplus033719.raw F4 631.7 493.9 694.2 510.3 516.1 594.3 367 4.12 1 FALSE 1.14E-05 5.66E-10 1.854 -250 38377 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHLLGR [R].gHLLGR.[L] N-Term(TMT6plex) 11 A0A1B0GS68 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Gm45713 PE=2 SV=1 A0A1B0GS68; A0A1B0GRH1; A0A1B0GTA1; Q3TDS9; A0A1B0GSC2; A0A1B0GSL5; P19253; A0A1B0GSJ2; A0A1B0GT00; A0A1B0GSQ6; A0A1B0GSB2 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Gm45713 PE=2 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=2 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=4; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1 0 2 2 0.35 0 1 1 1 441.27994 881.5526 881.55185 0.85 0.00037 0/0 0 0 59921532 HCD 30 MS2 20.53022 659 19.821 42.4209 10585 10585 10581 QEplus033719.raw F4 679 549.1 697.2 554.3 755.3 719.3 19 2.4 1 FALSE 0.005472 0.09274 0.027 -250 38387 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIVEHAR [R].vIVEHAR.[G] N-Term(TMT6plex) 5 Q542V3; Q3TWW8 Serine/arginine-rich-splicing factor 4 OS=Mus musculus OX=10090 GN=Srsf4 PE=1 SV=1;Serine/arginine-rich splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1 Q542V3; A0A0A6YXX6; Q8VE97; Q3TWW8; Q8K3A8 Serine/arginine-rich-splicing factor 4 OS=Mus musculus OX=10090 GN=Srsf4 PE=1 SV=1; Serine/arginine-rich-splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1; Serine/arginine-rich splicing factor 4 OS=Mus musculus OX=10090 GN=Srsf4 PE=2 SV=1; Serine/arginine-rich splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1; Sfrs4 protein OS=Mus musculus OX=10090 GN=Srsf4 PE=2 SV=1 0 2 2 0.7034 0 1 1 1 526.82458 1052.64189 1052.64139 0.47 0.00025 0/0 0 0 28213184 HCD 30 MS2 20.57069 640.6 51.091 42.4254 10587 10587 10581 QEplus033719.raw F4 615.2 635.1 706.9 434.3 805.6 646.8 43 2.63 2 FALSE 0.0008718 0.01198 0.374 -250 38406 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YADLSHNR [K].yADLSHNR.[L] N-Term(TMT6plex) 2 Q9D0I9 "Arginine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Rars1 PE=1 SV=2" Q3UAZ3; Q9D0I9 "Arginine--tRNA ligase (Fragment) OS=Mus musculus OX=10090 GN=Rars PE=2 SV=1; Arginine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Rars1 PE=1 SV=2" 0 3 3 0.7168 0 1 1 1 402.21396 1204.62732 1204.6272 0.1 0.00004 0/0 0 0 15636394 HCD 30 MS2 44.12906 469 54.921 42.4322 10590 10590 10581 QEplus033719.raw F4 542.5 345.9 485.5 463.3 458.7 518 219 3.92 1 FALSE 1.14E-05 4.21E-05 0.929 -250 38415 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPPSEEDSAEAER [R].tPPSEEDSAEAER.[L] N-Term(TMT6plex) 4 Q8BJU0 Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=2 Q8BJU0; A0A1W2P6P1; A0A1W2P7I5; Q8BJU0-2 Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=2; Small glutamine-rich tetratricopeptide repeat-containing protein alpha (Fragment) OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=1; Small glutamine-rich tetratricopeptide repeat-containing protein alpha (Fragment) OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=1; Isoform 2 of Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus OX=10090 GN=Sgta 0 3 3 0.7831 0 1 1 1 549.59552 1646.77201 1646.77069 0.8 0.00044 0/0 0 0 14424771 HCD 30 MS2 6.275225 383.3 110 42.4347 10591 10591 10581 QEplus033719.raw F4 469.3 266.9 380.3 297.7 452.4 433.5 60 5.21 1 FALSE 1.14E-05 1.81E-07 1.378 -250 38420 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQSGDASWR [R].aQSGDASWR.[A] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.6655 0 1 1 1 603.80695 1206.60661 1206.60647 0.12 0.00007 0/0 0 0 34268344 HCD 30 MS2 39.20996 820.8 47.939 42.442 10593 10593 10592 QEplus033719.raw F4 900.9 529.1 964.1 774.5 664.3 1091.9 193 2.84 1 FALSE 1.14E-05 0.0002236 0.79 -250 38429 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPAGPGSGIR [R].qPAGPGSGIR.[E] N-Term(TMT6plex) 3 Q8BPG6 Inactive C-alpha-formylglycine-generating enzyme 2 OS=Mus musculus OX=10090 GN=Sumf2 PE=1 SV=2 Q8BPG6; Q0VDW5; Q3TM08 Inactive C-alpha-formylglycine-generating enzyme 2 OS=Mus musculus OX=10090 GN=Sumf2 PE=1 SV=2; Sumf2 protein OS=Mus musculus OX=10090 GN=Sumf2 PE=2 SV=1; FGE-sulfatase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sumf2 PE=2 SV=1 0 2 2 0.5188 0 1 1 1 584.83502 1168.66277 1168.66359 -0.7 -0.00041 0/0 0 0 11214268 HCD 30 MS2 26.03499 562.1 110 42.4445 10594 10594 10592 QEplus033719.raw F4 546.9 539.7 636.7 426.2 681.3 542 203 2.39 1 FALSE 0.0001504 0.003367 0.546 -250 38437 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDEWAR [R].nDEWAR.[F] N-Term(TMT6plex) 8 A2BFF8 Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1 A2BFF8; D6Q0F6; Q3TPJ8; D6Q0F5; D6Q0F7; A2BFF9; A2BFF5; A2BFF7 Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1; Cytoplasmic dynein intermediate chain 2 isoform 2.2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=2 SV=1; Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1; Cytoplasmic dynein intermediate chain 2 isoform 2.1 OS=Mus musculus OX=10090 GN=Dync1i2 PE=2 SV=1; Cytoplasmic dynein intermediate chain 2 isoform 2.5 OS=Mus musculus OX=10090 GN=Dync1i2 PE=2 SV=1; Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1; Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1; Dynein cytoplasmic 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1 0 2 2 0.5992 0 1 1 1 510.25912 1019.51097 1019.51077 0.19 0.0001 0/0 0 0 41071192 HCD 30 MS2 11.05728 645.3 31.224 42.4468 10595 10595 10592 QEplus033719.raw F4 713.8 531.2 685.4 533.6 722.2 685.3 137 2.47 1 FALSE 0.003261 0.06361 0.104 -250 38440 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRESDITK [R].qRESDITk.[E] N-Term(TMT6plex); K8(TMT6plex) 2 P11983 T-complex protein 1 subunit alpha OS=Mus musculus OX=10090 GN=Tcp1 PE=1 SV=3 P11983-2; P11983 Isoform 2 of T-complex protein 1 subunit alpha OS=Mus musculus OX=10090 GN=Tcp1; T-complex protein 1 subunit alpha OS=Mus musculus OX=10090 GN=Tcp1 PE=1 SV=3 1 3 3 0.2991 0 1 1 1 478.9491 1434.83274 1434.83166 0.75 0.00036 0/0 0 0 26366590 HCD 30 MS2 60.7648 798.9 50.864 42.449 10596 10596 10592 QEplus033719.raw F4 909.7 617.7 851.3 752.7 794.2 867.9 460 2.34 1 FALSE 0.002318 0.04602 0.154 -250 38458 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEGDAAALNRR [K].aEGDAAALNRR.[I] N-Term(TMT6plex) 1 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 1 3 3 0.2566 0 1 1 1 458.25836 1372.76053 1372.74944 8.08 0.0037 0/0 0 0 45219504 HCD 30 MS2 42.23156 546.3 30.949 42.4561 10599 10599 10592 QEplus033719.raw F4 604.2 459.4 566.6 377.5 727.8 542.6 358 1.52 1 FALSE 0.005381 0.0919 0.029 -250 38462 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CRTEYEAK [R].cRTEYEAk.[D] N-Term(TMT6plex); C1(Carbamidomethyl); K8(TMT6plex) 6 G3UYE5 Polyadenylate-binding protein-interacting protein 1 OS=Mus musculus OX=10090 GN=Paip1 PE=1 SV=1 G3UZH8; G3UYE5; F6Y616; G3UZ67; Q8VE62; D3Z3J6 Polyadenylate-binding protein-interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Paip1 PE=1 SV=1; Polyadenylate-binding protein-interacting protein 1 OS=Mus musculus OX=10090 GN=Paip1 PE=1 SV=1; Polyadenylate-binding protein-interacting protein 1 OS=Mus musculus OX=10090 GN=Paip1 PE=1 SV=2; Polyadenylate-binding protein-interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Paip1 PE=1 SV=1; Polyadenylate-binding protein-interacting protein 1 OS=Mus musculus OX=10090 GN=Paip1 PE=1 SV=1; Polyadenylate-binding protein-interacting protein 1 OS=Mus musculus OX=10090 GN=Paip1 PE=1 SV=1 1 3 3 0.2643 0 1 1 1 505.60562 1514.80231 1514.80373 -0.94 -0.00047 0/0 0 0 8535797 HCD 30 MS2 41.60426 1108.8 110 42.4586 10600 10600 10592 QEplus033719.raw F4 1456.4 634.2 1012.2 905.1 1130.8 1513.8 279 2.8 1 FALSE 0.003953 0.0738 0.078 -250 38471 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NGGMMAEGAR [K].nGGMMAEGAR.[H] N-Term(TMT6plex) 1 Q8K0Z7 Translational activator of cytochrome c oxidase 1 OS=Mus musculus OX=10090 GN=Taco1 PE=1 SV=1 Q8K0Z7 Translational activator of cytochrome c oxidase 1 OS=Mus musculus OX=10090 GN=Taco1 PE=1 SV=1 0 2 2 0.5333 0 1 1 1 611.79785 1222.58843 1222.58699 1.17 0.00072 0/0 0 0 7504477.5 HCD 30 MS2 61.28936 555.9 110 42.4636 10602 10602 10592 QEplus033719.raw F4 627.9 418.3 581.5 504.9 537.5 665.4 78 1.8 1 FALSE 0.0001603 0.003588 0.539 -250 38482 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEEDSEEAREQK [K].aEEDSEEAREQk.[H] N-Term(TMT6plex); K12(TMT6plex) 2 Q61081 Hsp90 co-chaperone Cdc37 OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1 Q61081; A0A1L1STC0 Hsp90 co-chaperone Cdc37 OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1; Hsp90 co-chaperone Cdc37 (Fragment) OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1 1 3 3 0.7621 0 1 1 1 626.98621 1878.94406 1878.94452 -0.24 -0.00015 0/0 0 0 9236838 HCD 30 MS2 28.64179 546.8 110 42.4734 10605 10605 10603 QEplus033719.raw F4 582.2 474.9 576.1 355.5 760.9 531 201 2.69 1 FALSE 1.14E-05 4.04E-05 0.932 -250 38495 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDLEDER [K].cDLEDER.[V] N-Term(TMT6plex); C1(Carbamidomethyl) 10 C5H0E8; Q52L50 Rap1A-retro1 OS=Mus musculus OX=10090 GN=Gm9392 PE=2 SV=1;RAS related protein 1b OS=Mus musculus OX=10090 GN=Rap1b PE=1 SV=1 C5H0E8; Q3V3W9; Q8BP17; Q52L50; C5H0E9; A0A0G2JDL9; Q3U7U8; P62835; A0A0G2JE52; Q543Q4 Rap1A-retro1 OS=Mus musculus OX=10090 GN=Gm9392 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rap1a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab3d PE=2 SV=1; RAS related protein 1b OS=Mus musculus OX=10090 GN=Rap1b PE=1 SV=1; Rap1A-retro2 OS=Mus musculus OX=10090 GN=Rap1a PE=2 SV=1; Ras-related protein Rap-1A OS=Mus musculus OX=10090 GN=Rap1a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rap1a PE=2 SV=1; Ras-related protein Rap-1A OS=Mus musculus OX=10090 GN=Rap1a PE=1 SV=1; Ras-related protein Rap-1A OS=Mus musculus OX=10090 GN=Rap1a PE=1 SV=1; Ras-related protein Rab-3 OS=Mus musculus OX=10090 GN=Rab3d PE=1 SV=1 0 2 2 0.6228 0 1 1 1 583.27161 1165.53594 1165.53567 0.23 0.00013 0/0 0 0 13395218 HCD 30 MS2 0 749.8 110 42.4782 10607 10607 10603 QEplus033719.raw F4 750.1 652.8 874.7 691 645.8 884.5 24 2.89 2 FALSE 0.0009171 0.01263 0.364 -250 38497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MLQHEPDR [K].mLQHEPDR.[A] N-Term(TMT6plex) 2 Q80X73 Protein pelota homolog OS=Mus musculus OX=10090 GN=Pelo PE=1 SV=3 Q80X73; Q3THL5 Protein pelota homolog OS=Mus musculus OX=10090 GN=Pelo PE=1 SV=3; Protein pelota homolog OS=Mus musculus OX=10090 GN=Pelo PE=2 SV=1 0 3 3 0.4653 0 1 1 1 418.88736 1254.64753 1254.64622 1.04 0.00043 0/0 0 0 9437763 HCD 30 MS2 48.3887 595.4 110 42.4806 10608 10608 10603 QEplus033719.raw F4 611.3 1128.9 468.6 391.5 475.8 496 171 3.31 1 FALSE 0.000565 0.00865 0.427 -250 38506 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESQEMDNRPK [K].eSQEMDNRPk.[L] N-Term(TMT6plex); K10(TMT6plex) 2 Q0VB06 NECAP endocytosis associated 1 OS=Mus musculus OX=10090 GN=Necap1 PE=1 SV=1 Q0VB06; Q571F3 NECAP endocytosis associated 1 OS=Mus musculus OX=10090 GN=Necap1 PE=1 SV=1; MFLJ00061 protein (Fragment) OS=Mus musculus OX=10090 GN=Necap1 PE=2 SV=1 0 3 3 0.7362 0 1 1 1 564.6308 1691.87784 1691.87869 -0.5 -0.00028 0/0 0 0 8047526.5 HCD 30 MS2 8.226165 591.9 110 42.4831 10609 10609 10603 QEplus033719.raw F4 727.4 437.9 631.1 527.5 547.2 680.5 266 3.26 1 FALSE 1.14E-05 1.47E-08 1.586 -250 38509 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REVENSEDPK [K].rEVENSEDPk.[F] N-Term(TMT6plex); K10(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 1 2 2 0.5579 0 1 1 1 830.94922 1660.89116 1660.89063 0.32 0.00026 0/0 0 0 7563372.5 HCD 30 MS2 0 210 110 42.4857 10610 10610 10603 QEplus033719.raw F4 224.5 137.7 212.9 160.2 292.6 232.4 378 2.85 1 FALSE 1.14E-05 4.41E-07 1.305 -250 38523 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQEQIAK [K].rQEQIAk.[R] N-Term(TMT6plex); K7(TMT6plex) 3 Q5BLK1 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1 Q3TL53; Q5BLK1; Q8BT09 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1 1 2 2 0.3029 0 1 1 1 665.91449 1330.8217 1330.8207 0.75 0.0005 0/0 0 0 15883231 HCD 30 MS2 36.20861 418.9 110 42.4907 10612 10612 10603 QEplus033719.raw F4 593.5 255.9 438.8 331.5 442.6 450.9 533 2.08 1 FALSE 0.0008718 0.01201 0.373 -250 38543 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSPTRPNPPVR [R].gSPTRPNPPVR.[N] N-Term(TMT6plex) 4 E9PWE8 Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 Q3TAS8; E9PWE8; Q62188; Q3TT92 Amidohydro-rel domain-containing protein OS=Mus musculus OX=10090 GN=Dpysl3 PE=2 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 0 3 3 0.5989 0 1 1 1 469.60736 1406.80753 1406.80656 0.69 0.00032 0/0 0 0 83402632 HCD 30 MS2 8.577123 414.4 19.958 42.5005 10615 10615 10614 QEplus033719.raw F4 395.8 366.5 437.5 320.3 596.8 369.7 489 3.74 1 FALSE 1.14E-05 2.73E-06 1.154 -250 38553 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNQSSQISTEK [K].rNQSSQISTEk.[V] N-Term(TMT6plex); K11(TMT6plex) 5 P70336 Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1 Q3UMT5; P70336; A0A1Y7VMN0; P70336-2; F8VPK5 Rho-associated protein kinase 2 (Fragment) OS=Mus musculus OX=10090 GN=Rock2 PE=2 SV=1; Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1; Rho-associated protein kinase 2 (Fragment) OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1; Isoform 2 of Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2; Rho-associated protein kinase OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1 1 3 3 0.6091 0 1 1 1 579.3288 1735.97184 1735.97028 0.9 0.00052 0/0 0 0 8632521 HCD 30 MS2 35.28365 393.8 110 42.503 10616 10616 10614 QEplus033719.raw F4 430.7 331.2 414 322.7 489.1 374.8 473 3.94 1 FALSE 1.14E-05 2.82E-08 1.532 -250 38559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSPPAAR [R].vSPPAAR.[L] N-Term(TMT6plex) 1 P50637 Translocator protein OS=Mus musculus OX=10090 GN=Tspo PE=1 SV=1 P50637 Translocator protein OS=Mus musculus OX=10090 GN=Tspo PE=1 SV=1 0 2 2 0.3389 0 1 1 1 463.78506 926.56285 926.56208 0.83 0.00039 0/0 0 0 96070008 HCD 30 MS2 26.4456 617.4 12.97 42.5053 10617 10617 10614 QEplus033719.raw F4 539.2 561.5 695.5 562.4 574.3 771.3 53 2.39 1 FALSE 0.001591 0.02489 0.245 -250 38574 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIAEDADRK [K].hIAEDADRk.[Y] N-Term(TMT6plex); K9(TMT6plex) 18 E9Q456; G5E8R2; G5E8R1; E9Q450 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 E9Q456; E9Q455; G5E8R2; E9Q453; G5E8R1; Q8BSH3; E9Q452; F8WID5; A2RRI1; E9Q454; E9Q448; E9Q450; G5E8R0; Q564G1; B7ZNL3; Q8BP43; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 1 4 4 0.4829 0 1 1 1 378.9689 1512.85378 1512.85346 0.21 0.00008 0/0 0 0 41390248 HCD 30 MS2 33.78821 560.4 27.014 42.5097 10619 10619 10614 QEplus033719.raw F4 719.2 409 534.9 505.4 723.7 470.1 378 2.63 4 FALSE 0.0006294 0.009584 0.411 -250 38600 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSPSPSSR [K].lSPSPSSR.[VI] N-Term(TMT6plex) 5 P14733; A0A0R4J0Q5 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3;Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1 P14733; Q3V159; Q8C553; A0A0R4J0Q5; P21619 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lmnb2 PE=2 SV=1; IF rod domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Lmnb1 PE=2 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=2 0 2 2 0.1627 0 1 1 1 530.30145 1059.59563 1059.59959 -3.74 -0.00198 0/0 0 0 7288217 HCD 30 MS2 45.36272 906.8 110 42.5195 10623 10623 10614 QEplus033719.raw F4 928.9 795.6 1032.7 745.9 907.6 1030.2 281 1.66 2 FALSE 0.007939 0.1321 -0.063 -250 38616 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIAEDADRK [K].hIAEDADRk.[Y] N-Term(TMT6plex); K9(TMT6plex) 18 E9Q456; G5E8R2; G5E8R1; E9Q450 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 E9Q456; E9Q455; G5E8R2; E9Q453; G5E8R1; Q8BSH3; E9Q452; F8WID5; A2RRI1; E9Q454; E9Q448; E9Q450; G5E8R0; Q564G1; B7ZNL3; Q8BP43; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 1 3 3 0.6232 0 1 1 1 504.95627 1512.85425 1512.85346 0.52 0.00026 0/0 0 0 31632998 HCD 30 MS2 22.66302 983.5 58.411 42.5293 10626 10626 10625 QEplus033719.raw F4 1151.1 573 923.6 984.7 1087 1181.3 387 4.22 4 FALSE 1.14E-05 4.55E-06 1.112 -250 38631 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPDETLR [K].gPDETLR.[I] N-Term(TMT6plex) 1 Q9DCL9 Multifunctional protein ADE2 OS=Mus musculus OX=10090 GN=Paics PE=1 SV=4 Q9DCL9 Multifunctional protein ADE2 OS=Mus musculus OX=10090 GN=Paics PE=1 SV=4 0 2 2 0.4138 0 1 1 1 508.78287 1016.55846 1016.55739 1.05 0.00053 0/0 0 0 42486496 HCD 30 MS2 19.8253 736 29.404 42.5338 10628 10628 10625 QEplus033719.raw F4 806.8 682.3 729 482 1017.5 698.4 246 2.32 1 FALSE 0.005962 0.09875 0.01 -250 38635 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTSCLAER [K].dTScLAER.[W] N-Term(TMT6plex); C4(Carbamidomethyl) 2 Q9DAU1 Protein canopy homolog 3 OS=Mus musculus OX=10090 GN=Cnpy3 PE=1 SV=1 Q9DAU1; Q9DAU1-2 Protein canopy homolog 3 OS=Mus musculus OX=10090 GN=Cnpy3 PE=1 SV=1; Isoform 2 of Protein canopy homolog 3 OS=Mus musculus OX=10090 GN=Cnpy3 0 2 2 0.5871 0 1 1 1 590.79578 1180.58428 1180.58295 1.12 0.00066 0/0 0 0 13914310 HCD 30 MS2 7.76782 654.6 110 42.5363 10629 10629 10625 QEplus033719.raw F4 629.9 546.7 705.8 537.5 800 707.9 107 3.1 1 FALSE 1.14E-05 0.0002179 0.792 -250 38671 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASDPSSSLR [K].aSDPSSSLR.[A] N-Term(TMT6plex) 6 F6R6F1 RalBP1-associated Eps domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Reps1 PE=1 SV=1 O54916-3; F6R6F1; O54916-4; D3Z2E3; E9Q632; O54916 Isoform 3 of RalBP1-associated Eps domain-containing protein 1 OS=Mus musculus OX=10090 GN=Reps1; RalBP1-associated Eps domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Reps1 PE=1 SV=1; Isoform 4 of RalBP1-associated Eps domain-containing protein 1 OS=Mus musculus OX=10090 GN=Reps1; RalBP1-associated Eps domain-containing protein 1 OS=Mus musculus OX=10090 GN=Reps1 PE=1 SV=1; RalBP1-associated Eps domain-containing protein 1 OS=Mus musculus OX=10090 GN=Reps1 PE=1 SV=1; RalBP1-associated Eps domain-containing protein 1 OS=Mus musculus OX=10090 GN=Reps1 PE=1 SV=2 0 2 2 0.1378 0 1 1 1 574.81091 1148.61455 1148.61088 3.19 0.00183 0/0 0 0 7784454.5 HCD 30 MS2 34.36418 697.6 110 42.5511 10635 10635 10625 QEplus033719.raw F4 745.8 530.2 740.5 656.7 643.3 869.1 225 1.96 1 FALSE 0.0003996 0.007249 0.453 -250 38679 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GACSVGANVR [R].gAcSVGANVR.[D] N-Term(TMT6plex); C3(Carbamidomethyl) 1 Q8BYA0 Tubulin-specific chaperone D OS=Mus musculus OX=10090 GN=Tbcd PE=1 SV=1 Q8BYA0 Tubulin-specific chaperone D OS=Mus musculus OX=10090 GN=Tbcd PE=1 SV=1 0 2 2 0.4486 0 1 1 1 610.32697 1219.64665 1219.64147 4.25 0.00259 0/0 0 0 14565033 HCD 30 MS2 42.03993 802.4 110 42.5584 10637 10637 10636 QEplus033719.raw F4 857.3 675.9 931.2 654.5 874.7 820.9 236 2.43 1 FALSE 1.14E-05 0.0005554 0.713 -250 38691 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVEVER [R].dVEVER.[W] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.1897 0 1 1 2 488.26855 975.52983 975.53084 -1.03 -0.0005 0/0 0 0 92749800 HCD 30 MS2 43.62988 756.5 11.774 42.5632 10639 10639 10636 QEplus033719.raw F4 908.7 579 767.8 657.1 749.5 877.2 207 2.32 2 FALSE 0.003497 0.06765 0.094 -250 38705 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAPGGHVGR [K].lAPGGHVGR.[F] N-Term(TMT6plex) 3 Q9D8E6 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3 Q9D8E6; Q5ZEY2; Q9CSM5 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3; Ribosomal protein L4 (Fragment) OS=Mus musculus OX=10090 GN=Rpl4 PE=2 SV=1; 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=2 SV=2 0 2 2 0.3889 0 1 1 1 546.82782 1092.64836 1092.64754 0.75 0.00041 0/0 0 0 28676380 HCD 30 MS2 37.48294 755.1 45.464 42.5677 10641 10641 10636 QEplus033719.raw F4 672.2 706 866.9 566.5 814.2 904.8 131 2.52 1 FALSE 1.14E-05 0.0004586 0.73 -250 38715 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APVPGAQNSSQSR [K].aPVPGAQNSSQSR.[R] N-Term(TMT6plex) 1 Q99JB2 "Stomatin-like protein 2, mitochondrial OS=Mus musculus OX=10090 GN=Stoml2 PE=1 SV=1" Q99JB2 "Stomatin-like protein 2, mitochondrial OS=Mus musculus OX=10090 GN=Stoml2 PE=1 SV=1" 0 2 2 0.8283 0 1 1 1 764.40845 1527.80962 1527.80768 1.27 0.00097 0/0 0 0 9672898 HCD 30 MS2 0 213.5 110 42.5702 10642 10642 10636 QEplus033719.raw F4 218.4 194.8 240.6 211.7 185.5 230.2 292 3.67 1 FALSE 1.14E-05 1.17E-09 1.794 -250 38732 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESQSPDTTIQR [K].eSQSPDTTIQR.[T] N-Term(TMT6plex) 4 Q8BFY9 Transportin-1 OS=Mus musculus OX=10090 GN=Tnpo1 PE=1 SV=2 Q3TKD0; Q8BFY9; J3QMX2; Q8BFY9-2 Transportin-1 (Fragment) OS=Mus musculus OX=10090 GN=Tnpo1 PE=1 SV=1; Transportin-1 OS=Mus musculus OX=10090 GN=Tnpo1 PE=1 SV=2; Transportin-1 (Fragment) OS=Mus musculus OX=10090 GN=Tnpo1 PE=1 SV=1; Isoform 2 of Transportin-1 OS=Mus musculus OX=10090 GN=Tnpo1 0 2 2 0.644 0 1 1 1 745.88684 1490.76641 1490.76482 1.07 0.00079 0/0 0 0 6810766 HCD 30 MS2 0 238.6 110 42.5753 10644 10644 10636 QEplus033719.raw F4 241.5 233 254.4 176.3 285.9 240.4 219 3.68 1 FALSE 1.14E-05 5.31E-07 1.29 -250 38747 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPSGEPGK [R].gPSGEPGk.[N] N-Term(TMT6plex); K8(TMT6plex) 7 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 2 2 0.3115 0 1 1 1 593.84631 1186.68535 1186.68321 1.81 0.00107 0/0 0 0 3490166.25 HCD 30 MS2 27.57252 543.1 110 42.5803 10646 10646 10636 QEplus033719.raw F4 825.2 452.1 644.8 363.4 379.1 593.8 360 1.83 1 FALSE 1.14E-05 0.0006093 0.705 -250 38766 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAPGGHVGR [K].lAPGGHVGR.[F] N-Term(TMT6plex) 3 Q9D8E6 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3 Q9D8E6; Q5ZEY2; Q9CSM5 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3; Ribosomal protein L4 (Fragment) OS=Mus musculus OX=10090 GN=Rpl4 PE=2 SV=1; 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=2 SV=2 0 3 3 0.6905 0 1 1 1 364.88803 1092.64954 1092.64754 1.83 0.00067 0/0 0 0 440541728 HCD 30 MS2 4.121947 208.5 2.909 42.5923 10650 10650 10647 QEplus033719.raw F4 204.8 188.9 238.6 149.2 214.2 255.5 131 4.75 1 FALSE 1.14E-05 4.78E-07 1.298 -250 38776 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CFGEQAR [K].cFGEQAR.[K] N-Term(TMT6plex); C1(Carbamidomethyl) 2 Q8R010 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 OS=Mus musculus OX=10090 GN=Aimp2 PE=1 SV=2 Q8R3V2; Q8R010 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 OS=Mus musculus OX=10090 GN=Aimp2 PE=1 SV=1; Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 OS=Mus musculus OX=10090 GN=Aimp2 PE=1 SV=2 0 2 2 0.4323 0 1 1 1 548.77466 1096.54204 1096.54069 1.23 0.00067 0/0 0 0 13896264 HCD 30 MS2 22.10897 1064 110 42.5971 10652 10652 10647 QEplus033719.raw F4 1141.4 809.4 1135.5 974.2 1039.9 1283.6 81 2.29 1 FALSE 0.001903 0.03234 0.205 -250 38797 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQNEGDCATSANEK [K].eQNEGDcATSANEk.[L] N-Term(TMT6plex); C7(Carbamidomethyl); K14(TMT6plex) 2 Q3TBW2 "39S ribosomal protein L10, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl10 PE=1 SV=2" A2A715; Q3TBW2 "39S ribosomal protein L10, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl10 PE=1 SV=1; 39S ribosomal protein L10, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl10 PE=1 SV=2" 0 3 3 0.8878 0 1 1 1 670.98676 2010.94571 2010.94387 0.92 0.00061 0/0 0 0 6673870 HCD 30 MS2 0 209.1 110 42.6046 10655 10655 10647 QEplus033719.raw F4 218.7 163.1 217.5 221.4 184.9 248.8 77 5.97 1 FALSE 1.14E-05 3.73E-13 2.458 -250 38802 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQVLER [K].sQVLER.[IN] N-Term(TMT6plex) 5 Q52KR3 Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2 PE=1 SV=2 Q9Z1T6-1; Q52KR3-6; D3Z5N5; Q9Z1T6; Q52KR3 Isoform 2 of 1-phosphatidylinositol 3-phosphate 5-kinase OS=Mus musculus OX=10090 GN=Pikfyve; Isoform 6 of Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2; 1-phosphatidylinositol-3-phosphate 5-kinase OS=Mus musculus OX=10090 GN=Pikfyve PE=1 SV=2; 1-phosphatidylinositol 3-phosphate 5-kinase OS=Mus musculus OX=10090 GN=Pikfyve PE=1 SV=3; Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2 PE=1 SV=2 0 2 2 0.0773 0 1 1 1 480.78778 960.56828 960.56756 0.75 0.00036 0/0 0 0 7657395 HCD 30 MS2 50.99598 940.1 110 42.6071 10656 10656 10647 QEplus033719.raw F4 1133.1 750.5 945.2 766.7 1041.2 1004.1 208 2.07 1 FALSE 0.005276 0.09031 0.033 -250 38812 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGIPPQQQR [K].eGIPPQQQR.[L] N-Term(TMT6plex) 2 P29595 NEDD8 OS=Mus musculus OX=10090 GN=Nedd8 PE=1 SV=2 P29595; Q3TY05 NEDD8 OS=Mus musculus OX=10090 GN=Nedd8 PE=1 SV=2; NEDD8 (Fragment) OS=Mus musculus OX=10090 GN=Nedd8 PE=2 SV=1 0 2 2 0.5235 0 1 1 1 641.35962 1281.71196 1281.71126 0.54 0.00035 0/0 0 0 7230062.5 HCD 30 MS2 37.03933 349.2 110 42.6096 10657 10657 10647 QEplus033719.raw F4 359.1 291.3 373.7 294 414.9 362.1 373 2.77 1 FALSE 0.001359 0.01944 0.286 -250 38818 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEQAAAEK [K].eEQAAAEk.[A] N-Term(TMT6plex); K8(TMT6plex) 2 P14206 40S ribosomal protein SA OS=Mus musculus OX=10090 GN=Rpsa PE=1 SV=4 P14206; B2CY77 40S ribosomal protein SA OS=Mus musculus OX=10090 GN=Rpsa PE=1 SV=4; Laminin receptor (Fragment) OS=Mus musculus OX=10090 GN=Rpsa PE=2 SV=1 0 2 2 0.0746 0 1 1 1 667.37189 1333.7365 1333.73637 0.1 0.00007 0/0 0 0 9691288 HCD 30 MS2 20.63472 488.9 110 42.6169 10659 10659 10658 QEplus033719.raw F4 858.6 208 345.2 773.6 326.4 421.6 397 1.34 1 FALSE 0.007252 0.1158 -0.033 -250 38833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVTEMNGR [K].aVTEMNGR.[I] N-Term(TMT6plex) 12 P29341; Q99LF8 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2;Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1 P29341; Q3U8U8; Q99LF8; A2A5N3; Q91YZ8; A3KFU5; B2RXY9; Q3UX16; Q8BN32; A3KFU8; Q6PHQ9; Q99KL3 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1l PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1l PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1 0 2 2 0.5857 0 1 1 1 553.79541 1106.58354 1106.58256 0.89 0.00049 0/0 0 0 94286664 HCD 30 MS2 8.427871 555.8 12.827 42.6217 10661 10661 10658 QEplus033719.raw F4 591.1 466 599 432.1 594.2 652.5 243 2.8 2 FALSE 5.44E-05 0.002016 0.598 -250 38842 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLEELRR [K].rLEELRR.[R] N-Term(TMT6plex) 11 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; F6RGN9; Q3UGC3; E9QA15; F6ZAW1; E9Q0M9; D3Z6I7; S4R1T7; F6T2Z7; E9QA16; F6QLP8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 2 3 3 0.0609 0 1 1 1 400.91772 1200.73862 1200.73742 1 0.0004 0/0 0 0 46875292 HCD 30 MS2 21.24153 322 14.372 42.6239 10662 10662 10658 QEplus033719.raw F4 360.1 272.2 384.2 232.3 374.6 308.5 255 2.79 1 FALSE 0.003405 0.06617 0.098 -250 38848 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDREGKPR [K].iDREGkPR.[K] N-Term(TMT6plex); K6(TMT6plex) 4 A0A1W2P7A1 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=1 P63323; A0A1W2P7A1; F7AEH4; Q6ZWZ6 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=2; 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=1; 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=1; 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=1 1 4 4 0.4388 0 1 1 1 357.97299 1428.87014 1428.86872 0.99 0.00036 0/0 0 0 42141960 HCD 30 MS2 25.80598 451.9 18.676 42.6262 10663 10663 10658 QEplus033719.raw F4 597.5 336 454.5 470.8 464.5 388.2 293 2.78 1 FALSE 0.006275 0.1019 0.001 -250 38868 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VANSGITR [K].vANSGITR.[V] N-Term(TMT6plex) 4 P80315 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3 P80315; Q3TII0; Q3UJZ8; G5E839 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1 0 2 2 0.5789 0 1 1 1 523.81177 1046.61626 1046.61557 0.65 0.00034 0/0 0 0 27022920 HCD 30 MS2 22.34015 1289.8 80.438 42.6329 10666 10666 10658 QEplus033719.raw F4 1431.7 994.8 1302.7 1094.8 1445.1 1469.6 208 2.66 1 FALSE 5.44E-05 0.00231 0.584 -250 38875 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVQSENIR [R].tVQSENIR.[Q] N-Term(TMT6plex) 4 B1ARU4 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 B1ARU4; E9QA63; Q9QXZ0; E9PVY8 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 2 2 0.482 0 1 1 1 588.33435 1175.66142 1175.65817 2.77 0.00163 0/0 0 0 21688566 HCD 30 MS2 20.5824 910.8 76.66 42.6352 10667 10667 10658 QEplus033719.raw F4 1000 465.9 1100.5 908.9 557.3 1432 284 3.05 1 FALSE 1.14E-05 0.0001525 0.822 -250 38884 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDREGKPR [K].iDREGkPR.[K] N-Term(TMT6plex); K6(TMT6plex) 4 A0A1W2P7A1 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=1 P63323; A0A1W2P7A1; F7AEH4; Q6ZWZ6 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=2; 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=1; 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=1; 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=1 1 3 3 0.498 0 1 1 1 476.96149 1428.86991 1428.86872 0.83 0.0004 0/0 0 0 16295843 HCD 30 MS2 29.08976 904.8 91.529 42.6375 10668 10668 10658 QEplus033719.raw F4 1160.2 709.6 1005.1 783 963.2 807.8 292 2.49 1 FALSE 0.005276 0.09032 0.033 -250 38890 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSTEQSGEAQGEAAK [R].sSTEQSGEAQGEAAk.[S] N-Term(TMT6plex); K15(TMT6plex) 1 P63248 cAMP-dependent protein kinase inhibitor alpha OS=Mus musculus OX=10090 GN=Pkia PE=1 SV=2 P63248 cAMP-dependent protein kinase inhibitor alpha OS=Mus musculus OX=10090 GN=Pkia PE=1 SV=2 0 3 3 0.7442 0 1 1 1 646.66583 1937.98294 1937.98163 0.68 0.00044 0/0 0 0 12317981 HCD 30 MS2 32.81115 380.3 110 42.6448 10670 10670 10669 QEplus033719.raw F4 442.8 252.1 383.6 438.5 288.3 476.8 266 4.3 1 FALSE 1.14E-05 3.31E-10 1.898 -250 38898 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLEEVTR [K].rLEEVTR.[E] N-Term(TMT6plex) 4 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0; Q8C7E8 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 1 2 2 0.2755 0 1 1 1 566.33856 1131.66985 1131.66834 1.33 0.00075 0/0 0 0 17529170 HCD 30 MS2 18.69549 429 110 42.6473 10671 10671 10669 QEplus033719.raw F4 452.6 374.6 468.4 316.8 498.8 463.1 329 1.96 1 FALSE 0.00079 0.01088 0.39 -250 38906 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLEEVTR [K].rLEEVTR.[E] N-Term(TMT6plex) 4 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0; Q8C7E8 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 1 3 3 0.2952 0 1 1 1 377.89456 1131.66913 1131.66834 0.7 0.00026 0/0 0 0 88569864 HCD 30 MS2 10.88055 289.2 15.32 42.6495 10672 10672 10669 QEplus033719.raw F4 343.4 255.7 304.9 207.8 338.5 284.8 363 3.32 1 FALSE 0.001429 0.0207 0.275 -250 38914 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYVEVGR [R].rYVEVGR.[V] N-Term(TMT6plex) 4 Q9CR57; Q569Z0 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14 PE=1 SV=3;60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14-ps1 PE=2 SV=1 Q9CR57; Q569Z0; A0A1L1SUF6; Q9CWK0 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14 PE=1 SV=3; 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14-ps1 PE=2 SV=1; 60S ribosomal protein L14 (Fragment) OS=Mus musculus OX=10090 GN=Rpl14 PE=1 SV=1; 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14 PE=2 SV=1 1 3 3 0.4742 0 1 1 1 369.88699 1107.64643 1107.64721 -0.71 -0.00026 0/0 0 0 20238406 HCD 30 MS2 28.92566 531.7 42.674 42.6563 10675 10675 10669 QEplus033719.raw F4 510.8 420.8 588 456.5 617.4 596.5 263 3.1 2 FALSE 0.002981 0.05811 0.119 -250 38931 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPTVSNVR [R].gPTVSNVR.[L] N-Term(TMT6plex) 5 Q9JJ80 Ribosome production factor 2 homolog OS=Mus musculus OX=10090 GN=Rpf2 PE=2 SV=2 G3X926; Q9JJ80; S4R2R2; S4R1Y5; S4R2H5 Ribosome production factor 2 homolog OS=Mus musculus OX=10090 GN=Rpf2 PE=1 SV=1; Ribosome production factor 2 homolog OS=Mus musculus OX=10090 GN=Rpf2 PE=2 SV=2; Ribosome production factor 2 homolog (Fragment) OS=Mus musculus OX=10090 GN=Rpf2 PE=1 SV=1; Ribosome production factor 2 homolog (Fragment) OS=Mus musculus OX=10090 GN=Rpf2 PE=1 SV=1; Ribosome production factor 2 homolog (Fragment) OS=Mus musculus OX=10090 GN=Rpf2 PE=1 SV=1 0 2 2 0.4788 0 1 1 1 529.81256 1058.61785 1058.61557 2.15 0.00114 0/0 0 0 16516377 HCD 30 MS2 9.980447 781.8 96.751 42.6608 10677 10677 10669 QEplus033719.raw F4 800 710 900.5 538.2 868.9 873.3 310 2.36 1 FALSE 0.0003905 0.007002 0.458 -250 38958 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSSESVGTMR [K].tSSESVGTMR.[A] N-Term(TMT6plex) 4 A0A2I3BQE0 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Stk3 PE=1 SV=1 A0A2I3BQE0; Q9JI10-2; Q9CW82; Q9JI10 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Stk3 PE=1 SV=1; Isoform 2 of Serine/threonine-protein kinase 3 OS=Mus musculus OX=10090 GN=Stk3; Non-specific serine/threonine protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Stk3 PE=2 SV=1; Serine/threonine-protein kinase 3 OS=Mus musculus OX=10090 GN=Stk3 PE=1 SV=1 0 2 2 0.6065 0 1 1 1 642.32739 1283.64751 1283.64628 0.96 0.00061 0/0 0 0 11197533 HCD 30 MS2 62.00947 759.6 110 42.6726 10681 10681 10680 QEplus033719.raw F4 749.3 711.6 921.8 576.2 866.7 732 133 3.1 1 FALSE 1.14E-05 8.81E-05 0.868 -250 39003 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQVSEGGQLR [R].gQVSEGGQLR.[S] N-Term(TMT6plex) 2 Q3UHD6 Sorting nexin-27 OS=Mus musculus OX=10090 GN=Snx27 PE=1 SV=2 Q3UHD6; Q3UHD6-2 Sorting nexin-27 OS=Mus musculus OX=10090 GN=Snx27 PE=1 SV=2; Isoform 2 of Sorting nexin-27 OS=Mus musculus OX=10090 GN=Snx27 0 2 2 0.4858 0 1 1 1 630.34869 1259.69011 1259.69053 -0.33 -0.00021 0/0 0 0 9774438 HCD 30 MS2 0 549.1 110 42.6892 10688 10688 10680 QEplus033719.raw F4 579.5 482.9 584 421.1 633.7 593.6 351 3.52 1 FALSE 1.14E-05 4.26E-08 1.498 -250 39010 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTTQDAPEEVR [R].qTTQDAPEEVR.[N] N-Term(TMT6plex) 2 Q9JHS9 Spliceosome-associated protein CWC15 homolog OS=Mus musculus OX=10090 GN=Cwc15 PE=1 SV=1 Q9JHS9; A0A1L1SVD8 Spliceosome-associated protein CWC15 homolog OS=Mus musculus OX=10090 GN=Cwc15 PE=1 SV=1; Spliceosome-associated protein CWC15 homolog (Fragment) OS=Mus musculus OX=10090 GN=Cwc15 PE=1 SV=1 0 2 2 0.6344 0 1 1 1 751.88678 1502.76628 1502.76482 0.98 0.00073 0/0 0 0 8578485 HCD 30 MS2 0 208.5 110 42.6917 10689 10689 10680 QEplus033719.raw F4 213.8 202 223.8 155 245.5 210.7 179 4.24 1 FALSE 1.14E-05 1.23E-09 1.79 -250 39016 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEMMEYR [K].qEmMEYR.[H] N-Term(TMT6plex); M3(Oxidation) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 2 2 0.1084 0 1 1 1 616.2868 1231.56633 1231.56486 1.19 0.00074 0/0 0 0 5849493.5 HCD 30 MS2 26.91307 428.9 110 42.6942 10690 10690 10680 QEplus033719.raw F4 442.8 274.8 437.5 508.3 353.4 556.8 29 1.66 1 FALSE 0.007474 0.1213 -0.044 -250 39021 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ACTTEEDQEK [K].acTTEEDQEk.[L] N-Term(TMT6plex); C2(Carbamidomethyl); K10(TMT6plex) 1 B2RRH9 Glutamine amidotransferase OS=Mus musculus OX=10090 GN=Gmps PE=1 SV=1 B2RRH9 Glutamine amidotransferase OS=Mus musculus OX=10090 GN=Gmps PE=1 SV=1 0 2 2 0.6388 0 1 1 1 834.91241 1668.81755 1668.81509 1.48 0.00123 0/0 0 0 8345152 HCD 30 MS2 11.38537 394.5 110 42.7016 10692 10692 10691 QEplus033719.raw F4 436.4 327.9 376.8 276.7 637.4 311.6 147 4.07 1 FALSE 1.14E-05 3.25E-08 1.52 -250 39029 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEGTTPEK [K].sEGTTPEk.[N] N-Term(TMT6plex); K8(TMT6plex) 2 Q7TPV4 Myb-binding protein 1A OS=Mus musculus OX=10090 GN=Mybbp1a PE=1 SV=2 Q3TLF6; Q7TPV4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Mybbp1a PE=2 SV=1; Myb-binding protein 1A OS=Mus musculus OX=10090 GN=Mybbp1a PE=1 SV=2 0 2 2 0.3831 0 1 1 1 653.86658 1306.72588 1306.72547 0.31 0.00021 0/0 0 0 4899798.5 HCD 30 MS2 0 275.1 110 42.7041 10693 10693 10691 QEplus033719.raw F4 378 231.5 338.1 197 221.7 284.2 370 2.48 1 FALSE 1.14E-05 0.0009565 0.666 -250 39039 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQLAAAAR [K].sQLAAAAR.[A] N-Term(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.3496 0 1 1 1 508.80682 1016.60637 1016.60501 1.34 0.00068 0/0 0 0 73124448 HCD 30 MS2 42.56026 525.8 12.137 42.7063 10694 10694 10691 QEplus033719.raw F4 628.5 421.5 524.1 450.7 604.1 526.1 214 2.46 1 FALSE 0.0002518 0.005112 0.499 -250 39048 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATLEQTER [R].aTLEQTER.[SA] N-Term(TMT6plex) 8 Q5SX40; P13541; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q9ESW6; B2RWW8; Q5SX40; P13541; G3UW82; B2RWX0; Q3TT35; P13542 "Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.484 0 1 1 1 588.82477 1176.64226 1176.64218 0.07 0.00004 0/0 0 0 46546908 HCD 30 MS2 31.60553 712.8 20.931 42.7086 10695 10695 10691 QEplus033719.raw F4 833.5 162.7 629.5 1251.3 184.1 1215.7 305 2.81 3 FALSE 1.14E-05 0.0006497 0.7 -250 39073 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAAENQYGR [R].vAAENQYGR.[G] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.7143 0 1 1 1 618.8313 1236.65532 1236.65342 1.54 0.00095 0/0 0 0 28907522 HCD 30 MS2 12.62423 734.1 66.482 42.7154 10698 10698 10691 QEplus033719.raw F4 845.4 198.4 601.9 1358 264.5 1136.6 262 2.87 2 FALSE 1.14E-05 4.81E-05 0.918 -250 39099 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ICPQPEEHR [K].icPQPEEHR.[I] N-Term(TMT6plex); C2(Carbamidomethyl) 1 ENSEMBL:ENSBTAP00000024146 (Bos taurus) similar to alpha-2-macroglobulin isoform 1 ENSEMBL:ENSBTAP00000024146 (Bos taurus) similar to alpha-2-macroglobulin isoform 1 0 3 3 0.4804 0 1 1 1 465.57309 1394.70472 1394.7048 -0.06 -0.00003 0/0 0 0 17407290 HCD 30 MS2 34.0129 607.9 91.655 42.7222 10701 10701 10691 QEplus033719.raw F4 585.8 467.5 628.8 513.2 799.5 652.8 157 3.06 1 TRUE 0.0002419 0.004959 0.502 -250 39108 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATTLAER [K].aTTLAER.[S] N-Term(TMT6plex) 9 Q3TWG9; A0A140LHR4 Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1;Serpin H1 (Fragment) OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=1 A0A140LHK0; Q8BVU9; Q3TJK3; Q3TWG9; Q8BV87; Q3TMD2; A0A140LHR4; A0A140LHD6; P19324 Serpin H1 (Fragment) OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Serpin H1 (Fragment) OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=1; Serpin H1 (Fragment) OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=1; Serpin H1 OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=3 0 2 2 0.5411 0 1 1 1 495.79337 990.57945 990.57813 1.34 0.00066 0/0 0 0 27722848 HCD 30 MS2 22.8311 652.1 42.219 42.7295 10703 10703 10702 QEplus033719.raw F4 635.1 521.8 735.9 540.9 817 661.8 166 2.31 2 FALSE 0.0003905 0.006992 0.458 -250 39117 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AATGEEVPR [K].aATGEEVPR.[T] N-Term(TMT6plex) 2 Q8CGY8 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Mus musculus OX=10090 GN=Ogt PE=1 SV=2 Q8CGY8-2; Q8CGY8 Isoform 2 of UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Mus musculus OX=10090 GN=Ogt; UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Mus musculus OX=10090 GN=Ogt PE=1 SV=2 0 2 2 0.568 0 1 1 1 579.82062 1158.63396 1158.63162 2.02 0.00117 0/0 0 0 20112582 HCD 30 MS2 44.09388 806 49.588 42.7318 10704 10704 10702 QEplus033719.raw F4 1050.7 648.8 895.5 566.6 730.8 943.6 249 2.5 1 FALSE 1.14E-05 3.74E-05 0.939 -250 39122 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLPDGR [KR].dLPDGR.[W] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.0922 0 1 1 1 451.25079 901.49431 901.49406 0.28 0.00012 0/0 0 0 58977000 HCD 30 MS2 42.95601 513.9 16.29 42.734 10705 10705 10702 QEplus033719.raw F4 621.1 170.2 372 908.1 249.1 762.7 42 2.06 2 FALSE 0.004296 0.07871 0.065 -250 39160 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGPGSPGPK [R].gGPGSPGPk.[G] N-Term(TMT6plex); K9(TMT6plex) 7 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 2 2 0.4659 0 1 1 1 606.36145 1211.71562 1211.71484 0.64 0.00039 0/0 0 0 5000683.5 HCD 30 MS2 9.550562 695 110 42.7511 10712 10712 10702 QEplus033719.raw F4 749.7 763.2 837.9 422.7 727.5 668.9 277 2.64 1 FALSE 1.14E-05 6.13E-06 1.088 -250 39194 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAAQTLER [K].aAAQTLER.[F] N-Term(TMT6plex) 2 Q543K9 Purine nucleoside phosphorylase OS=Mus musculus OX=10090 GN=Pnp PE=1 SV=1 Q543K9; P23492 Purine nucleoside phosphorylase OS=Mus musculus OX=10090 GN=Pnp PE=1 SV=1; Purine nucleoside phosphorylase OS=Mus musculus OX=10090 GN=Pnp PE=1 SV=2 0 2 2 0.5415 0 1 1 1 544.81732 1088.62737 1088.62614 1.13 0.00061 0/0 0 0 51204944 HCD 30 MS2 4.052924 576.9 27.527 42.7655 10717 10717 10713 QEplus033719.raw F4 489.3 710.9 665.8 344.6 708.2 542.7 344 3.01 1 FALSE 1.14E-05 0.0001087 0.85 -250 39243 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAVSASSK [R].sAVSASSk.[W] N-Term(TMT6plex); K8(TMT6plex) 2 Q9CQB4 Cytochrome b-c1 complex subunit 7 OS=Mus musculus OX=10090 GN=Uqcrb PE=1 SV=1 Q9CQB4; Q9D855 Cytochrome b-c1 complex subunit 7 OS=Mus musculus OX=10090 GN=Uqcrb PE=1 SV=1; Cytochrome b-c1 complex subunit 7 OS=Mus musculus OX=10090 GN=Uqcrb PE=1 SV=3 0 2 2 0.477 0 1 1 1 597.85864 1194.71001 1194.70942 0.49 0.00029 0/0 0 0 8346569 HCD 30 MS2 37.01424 692.9 110 42.78 10723 10723 10713 QEplus033719.raw F4 1435.2 452.3 644.3 433.4 497.5 694.6 312 2.83 1 FALSE 1.14E-05 4.59E-05 0.922 -250 39262 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVQTDETAR [K].vVQTDETAR.[K] N-Term(TMT6plex) 2 Q8C7R4 Ubiquitin-like modifier-activating enzyme 6 OS=Mus musculus OX=10090 GN=Uba6 PE=1 SV=1 Q8C7R4; D3Z061 Ubiquitin-like modifier-activating enzyme 6 OS=Mus musculus OX=10090 GN=Uba6 PE=1 SV=1; E1 ubiquitin-activating enzyme OS=Mus musculus OX=10090 GN=Uba6 PE=1 SV=1 0 2 2 0.5935 0 1 1 1 624.3418 1247.67632 1247.6793 -2.39 -0.00149 0/0 0 0 6446968 HCD 30 MS2 30.74195 511.3 110 42.7898 10726 10726 10724 QEplus033719.raw F4 596.6 466.7 561.4 376.8 570.8 495.8 306 3.37 1 FALSE 1.14E-05 9.98E-07 1.238 -250 39279 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DPNNDFR [K].dPNNDFR.[Q] N-Term(TMT6plex) 1 Q9CQM5 Thioredoxin domain-containing protein 17 OS=Mus musculus OX=10090 GN=Txndc17 PE=1 SV=1 Q9CQM5 Thioredoxin domain-containing protein 17 OS=Mus musculus OX=10090 GN=Txndc17 PE=1 SV=1 0 2 2 0.5041 0 1 1 1 553.77545 1106.54363 1106.5428 0.74 0.00041 0/0 0 0 29955698 HCD 30 MS2 41.59058 607.5 31.714 42.7966 10729 10729 10724 QEplus033719.raw F4 667.5 501.8 671.9 476.2 681.3 646.2 92 2.46 1 FALSE 0.001177 0.01575 0.324 -250 39291 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNLGVAR [R].sNLGVAR.[I] N-Term(TMT6plex) 3 Q99K41 EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1 Q99K41; Q3U254; Q3USG5 EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; C1q domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1 0 2 2 0.3009 0 1 1 1 473.28778 945.56828 945.5679 0.41 0.00019 0/0 0 0 25772682 HCD 30 MS2 27.55623 1049.8 58.903 42.8011 10731 10731 10724 QEplus033719.raw F4 1066.2 893.4 1153.7 922.1 1076.5 1187 86 2.16 1 FALSE 0.001591 0.0246 0.247 -250 39301 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTGGPGCSR [K].lTGGPGcSR.[S] N-Term(TMT6plex); C7(Carbamidomethyl) 1 Q6P9Q4 FH1/FH2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Fhod1 PE=1 SV=3 Q6P9Q4 FH1/FH2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Fhod1 PE=1 SV=3 0 2 2 0.403 0 1 1 1 567.3009 1133.59453 1133.59346 0.95 0.00054 0/0 0 0 19495858 HCD 30 MS2 55.1591 605.1 70.3 42.8034 10732 10732 10724 QEplus033719.raw F4 594.9 533.4 678.8 404.2 759.9 659.4 221 2.01 1 FALSE 0.002233 0.04321 0.163 -250 39324 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YIQHTYR [K].yIQHTYR.[K] N-Term(TMT6plex) 1 Q99PT1 Rho GDP-dissociation inhibitor 1 OS=Mus musculus OX=10090 GN=Arhgdia PE=1 SV=3 Q99PT1 Rho GDP-dissociation inhibitor 1 OS=Mus musculus OX=10090 GN=Arhgdia PE=1 SV=3 0 3 3 0.5683 0 1 1 1 403.8912 1209.65906 1209.65777 1.07 0.00043 0/0 0 0 117739344 HCD 30 MS2 8.326974 231.8 10.895 42.82 10738 10738 10735 QEplus033719.raw F4 218.3 207.1 249.6 203.3 282.9 229.7 268 3.15 1 FALSE 0.0002719 0.005539 0.489 -250 39334 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVEDEERR [R].lVEDEERR.[W] N-Term(TMT6plex) 2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q80U36; Q9JHU4 MKIAA0325 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 1 3 3 0.5134 0 1 1 1 425.56897 1274.69236 1274.69019 1.7 0.00072 0/0 0 0 69741496 HCD 30 MS2 42.54494 480.5 12.431 42.8222 10739 10739 10735 QEplus033719.raw F4 575.4 339.5 543.5 454.4 391.1 579.2 295 3.72 1 FALSE 1.14E-05 7.22E-05 0.884 -250 39341 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVEETVR [R].tVEETVR.[R] N-Term(TMT6plex) 3 Q9D0R2 "Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2" Q3U630; Q9D0R2; Q99KJ4 "Threonyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1; Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2; Threonyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1" 0 2 2 0.2627 0 1 1 1 531.80396 1062.60063 1062.59925 1.3 0.00069 0/0 0 0 55438852 HCD 30 MS2 9.188863 609.4 24.762 42.8245 10740 10740 10735 QEplus033719.raw F4 655.3 505.4 676.8 516.9 643.2 659.1 205 2.55 1 FALSE 0.0006216 0.009281 0.416 -250 39346 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRPENVR [K].lRPENVR.[V] N-Term(TMT6plex) 3 Q9JHR7 Insulin-degrading enzyme OS=Mus musculus OX=10090 GN=Ide PE=1 SV=1 Q9JHR7; Q8CGB9; Q8CE37 Insulin-degrading enzyme OS=Mus musculus OX=10090 GN=Ide PE=1 SV=1; Insulin-degrading enzyme OS=Mus musculus OX=10090 GN=Ide PE=1 SV=1; Peptidase_M16_M domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ide PE=2 SV=1 0 3 3 0.1775 0 1 1 1 371.56329 1112.67533 1112.67376 1.41 0.00052 0/0 0 0 24100100 HCD 30 MS2 60.00188 348.1 27.814 42.8267 10741 10741 10735 QEplus033719.raw F4 358.2 327.3 402.5 246.6 358.7 395.1 111 2.31 1 FALSE 0.005089 0.08783 0.04 -250 39354 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YLCQNGR [R].yLcQNGR.[C] N-Term(TMT6plex); C3(Carbamidomethyl) 3 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q60784 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Fibrillin-1 (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1 0 2 2 0.4525 0 1 1 1 570.29626 1139.58525 1139.58289 2.07 0.00118 0/0 0 0 21209264 HCD 30 MS2 13.98093 836.6 82.3 42.829 10742 10742 10735 QEplus033719.raw F4 864.2 586.1 965.4 1089.4 492.4 1022.1 108 2.21 1 FALSE 0.001762 0.03006 0.216 -250 39377 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QELASQAER [R].qELASQAER.[A] N-Term(TMT6plex) 1 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 0 2 2 0.4125 0 1 1 1 630.84161 1260.67595 1260.67454 1.12 0.0007 0/0 0 0 11145063 HCD 30 MS2 21.05429 512.3 110 42.8363 10745 10745 10735 QEplus033719.raw F4 516.4 520.3 561.6 380.5 602.9 492.2 279 3.03 1 FALSE 1.14E-05 2.19E-06 1.173 -250 39384 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FTQQNYHDR [K].fTQQNYHDR.[L] N-Term(TMT6plex) 3 Q99ME9 GTP-binding protein 4 OS=Mus musculus OX=10090 GN=Gtpbp4 PE=1 SV=3 Q3UR29; Q99ME9; Q3TPJ4 Nucleolar GTP-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Gtpbp4 PE=2 SV=1; GTP-binding protein 4 OS=Mus musculus OX=10090 GN=Gtpbp4 PE=1 SV=3; Nucleolar GTP-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Gtpbp4 PE=2 SV=1 0 3 3 0.7124 0 1 1 1 479.90793 1437.70923 1437.70724 1.38 0.00066 0/0 0 0 8988106 HCD 30 MS2 41.41408 679.7 110 42.8436 10747 10747 10746 QEplus033719.raw F4 694.5 518.4 684.4 611.5 813.5 755.9 147 3.86 1 FALSE 1.14E-05 7.69E-05 0.879 -250 39391 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETAAACGEK [K].eTAAAcGEk.[-] N-Term(TMT6plex); C6(Carbamidomethyl); K9(TMT6plex) 1 Q62348 Translin OS=Mus musculus OX=10090 GN=Tsn PE=1 SV=1 Q62348 Translin OS=Mus musculus OX=10090 GN=Tsn PE=1 SV=1 0 2 2 0.5298 0 1 1 1 697.87238 1394.73747 1394.73499 1.78 0.00124 0/0 0 0 6683176 HCD 30 MS2 20.41378 462.6 110 42.8461 10748 10748 10746 QEplus033719.raw F4 668.2 389.4 521.1 337.1 445.7 414 294 3.19 1 FALSE 1.14E-05 1.28E-06 1.217 -250 39399 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAQEVDTYRR [R].tAQEVDTYRR.[S] N-Term(TMT6plex) 10 Q5U222 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1 B1ARC0; Q3UXW3; Q5U222; Q3V0Z8; B1ARB9; O35662; A1L333; S4R1I6; Q61656; Q8BTS0 RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=8; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=8; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Hlr1 PE=4 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 1 3 3 0.5556 0 1 1 1 489.9303 1467.77634 1467.77532 0.69 0.00034 0/0 0 0 38980096 HCD 30 MS2 12.72795 661.7 51.738 42.8483 10749 10749 10746 QEplus033719.raw F4 647.4 658.8 758.4 477.4 795.4 632.9 260 4.95 1 FALSE 1.14E-05 1.82E-10 1.948 -250 39409 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FVQSSGR [K].fVQSSGR.[I] N-Term(TMT6plex) 3 Q6A065 Centrosomal protein of 170 kDa OS=Mus musculus OX=10090 GN=Cep170 PE=1 SV=2 A0A0A6YXK7; Q6A065; H7BX26 Centrosomal protein of 170 kDa (Fragment) OS=Mus musculus OX=10090 GN=Cep170 PE=1 SV=1; Centrosomal protein of 170 kDa OS=Mus musculus OX=10090 GN=Cep170 PE=1 SV=2; Centrosomal protein of 170 kDa OS=Mus musculus OX=10090 GN=Cep170 PE=1 SV=1 0 2 2 0.2347 0 1 1 1 505.28543 1009.56359 1009.56281 0.77 0.00039 0/0 0 0 14696107 HCD 30 MS2 40.94617 1209.3 92.855 42.8529 10751 10751 10746 QEplus033719.raw F4 1315.2 1024.2 1241.7 994.5 1487.8 1192.7 81 1.96 1 FALSE 0.0008183 0.01128 0.384 -250 39419 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAVGAYGSER [K].gAVGAYGSER.[T] N-Term(TMT6plex) 3 Q3TTV6 Tuftelin-interacting protein 11 OS=Mus musculus OX=10090 GN=Tfip11 PE=1 SV=1 Q3TTV6; Q3UGE9; A0A0G2JEN8 Tuftelin-interacting protein 11 OS=Mus musculus OX=10090 GN=Tfip11 PE=1 SV=1; Tuftelin-interacting protein 11 OS=Mus musculus OX=10090 GN=Tfip11 PE=2 SV=1; Tuftelin-interacting protein 11 (Fragment) OS=Mus musculus OX=10090 GN=Tfip11 PE=1 SV=1 0 2 2 0.1241 0 1 1 1 598.31683 1195.62639 1195.62687 -0.4 -0.00024 0/0 0 0 9949348 HCD 30 MS2 33.53481 647 110 42.8554 10752 10752 10746 QEplus033719.raw F4 984.5 533.2 665.7 432.2 623.2 643 186 2.9 1 FALSE 1.14E-05 4.63E-06 1.111 -250 39433 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGVPTQAK [R].rGVPTQAk.[G] N-Term(TMT6plex); K8(TMT6plex) 9 Q62219 Transforming growth factor beta-1-induced transcript 1 protein OS=Mus musculus OX=10090 GN=Tgfb1i1 PE=1 SV=2 Q62219-10; Q62219-9; Q62219-3; Q62219; Q62219-2; Q62219-4; E9Q1D5; Q62219-7; Q62219-5 Isoform 10 of Transforming growth factor beta-1-induced transcript 1 protein OS=Mus musculus OX=10090 GN=Tgfb1i1; Isoform 9 of Transforming growth factor beta-1-induced transcript 1 protein OS=Mus musculus OX=10090 GN=Tgfb1i1; Isoform 3 of Transforming growth factor beta-1-induced transcript 1 protein OS=Mus musculus OX=10090 GN=Tgfb1i1; Transforming growth factor beta-1-induced transcript 1 protein OS=Mus musculus OX=10090 GN=Tgfb1i1 PE=1 SV=2; Isoform 2 of Transforming growth factor beta-1-induced transcript 1 protein OS=Mus musculus OX=10090 GN=Tgfb1i1; Isoform 4 of Transforming growth factor beta-1-induced transcript 1 protein OS=Mus musculus OX=10090 GN=Tgfb1i1; Transforming growth factor beta-1-induced transcript 1 protein OS=Mus musculus OX=10090 GN=Tgfb1i1 PE=1 SV=1; Isoform 7 of Transforming growth factor beta-1-induced transcript 1 protein OS=Mus musculus OX=10090 GN=Tgfb1i1; Isoform 5 of Transforming growth factor beta-1-induced transcript 1 protein OS=Mus musculus OX=10090 GN=Tgfb1i1 1 3 3 0.4134 0 1 1 1 438.94534 1314.82148 1314.82579 -3.28 -0.00144 0/0 0 0 34555016 HCD 30 MS2 43.14233 691.7 24.391 42.8627 10755 10755 10746 QEplus033719.raw F4 755.8 567.3 753 489.8 876.7 707.5 188 2.83 1 FALSE 5.44E-05 0.002584 0.573 -250 39448 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANYAVER [K].aNYAVER.[K] N-Term(TMT6plex) 1 Q8C4J7 Transducin beta-like protein 3 OS=Mus musculus OX=10090 GN=Tbl3 PE=2 SV=1 Q8C4J7 Transducin beta-like protein 3 OS=Mus musculus OX=10090 GN=Tbl3 PE=2 SV=1 0 2 2 0.4037 0 1 1 1 526.29089 1051.57451 1051.57337 1.08 0.00057 0/0 0 0 6205831 HCD 30 MS2 41.20594 660.6 110 42.875 10759 10759 10757 QEplus033719.raw F4 641 514.4 735.4 573.5 704.3 794.8 168 2.18 1 FALSE 0.0002814 0.005623 0.487 -250 39457 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTAQDVR [K].vTAQDVR.[K] N-Term(TMT6plex) 3 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4; Q3TZQ2 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 0 2 2 0.3714 0 1 1 1 509.2981 1017.58891 1017.58902 -0.11 -0.00005 0/0 0 0 178689440 HCD 30 MS2 32.72333 484.7 4.567 42.8773 10760 10760 10757 QEplus033719.raw F4 490.2 430.9 497.3 385.1 611.6 493.1 188 2.45 1 FALSE 0.00935 0.1753 -0.113 -250 39468 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EWGTGR [K].eWGTGR.[D] N-Term(TMT6plex) 1 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 0 2 2 0.4615 0 1 1 1 467.75125 934.49523 934.4944 0.89 0.00041 0/0 0 0 54364932 HCD 30 MS2 25.71128 779.3 21.039 42.8818 10762 10762 10757 QEplus033719.raw F4 854.8 229.5 587.5 1472.2 279.2 1252.8 109 2.08 1 FALSE 0.004228 0.07787 0.067 -250 39473 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YIQHTYR [K].yIQHTYR.[K] N-Term(TMT6plex) 1 Q99PT1 Rho GDP-dissociation inhibitor 1 OS=Mus musculus OX=10090 GN=Arhgdia PE=1 SV=3 Q99PT1 Rho GDP-dissociation inhibitor 1 OS=Mus musculus OX=10090 GN=Arhgdia PE=1 SV=3 0 2 2 0.4256 0 1 1 1 605.33392 1209.66057 1209.65777 2.31 0.0014 0/0 0 0 29073012 HCD 30 MS2 12.58793 813.5 64.716 42.884 10763 10763 10757 QEplus033719.raw F4 731.7 752.3 875.8 737.6 944.8 838.7 275 2.89 1 FALSE 0.001083 0.01408 0.344 -250 39482 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAGNRPGMEVDAR [R].gAGNRPGMEVDAR.[R] N-Term(TMT6plex) 2 E9PWE8 Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 E9PWE8; Q71H74 Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Collapsin response mediator protein 4A (Fragment) OS=Mus musculus OX=10090 GN=Dpysl3 PE=2 SV=1 0 3 3 0.7242 0 1 1 1 520.27045 1558.79679 1558.79574 0.67 0.00035 0/0 0 0 13482427 HCD 30 MS2 11.62518 661.6 102.093 42.8864 10764 10764 10757 QEplus033719.raw F4 669.8 502.3 555.5 429.6 1176.9 635.8 223 3.88 1 FALSE 1.14E-05 9.28E-07 1.243 -250 39493 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGAGVGSMTK [R].gGAGVGSmTk.[I] N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex) 6 Q5M9P3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1 D3YUT3; D3Z722; D3Z5R8; Q5M9P3; Q9CZX8; D3YUG3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=2; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=1; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=8; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=3; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=8 0 2 2 0.5157 0 1 1 1 669.87762 1338.74797 1338.74516 2.1 0.00141 0/0 0 0 7097266 HCD 30 MS2 18.54607 402.3 110 42.8912 10766 10766 10757 QEplus033719.raw F4 435.7 307.2 477.7 320.8 435 437.5 341 2.23 1 FALSE 1.14E-05 0.000402 0.741 -250 39500 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPSGPQGIR [R].gPSGPQGIR.[G] N-Term(TMT6plex) 5 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q91VL4; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Col1a2 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.4978 0 1 1 1 549.31708 1097.62688 1097.62647 0.37 0.0002 0/0 0 0 6964991 HCD 30 MS2 25.06663 793.5 110 42.8937 10767 10767 10757 QEplus033719.raw F4 824.2 652.9 844.7 761 837.8 840.1 108 2.25 1 FALSE 0.003134 0.06114 0.111 -250 39508 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVAAPK [K].rVAAPk.[H] N-Term(TMT6plex); K6(TMT6plex) 3 P62702 "40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2" V9GWY0; P62702; Q3UXQ6 "40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Gm15013 PE=3 SV=1; 40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1" 1 3 3 0.4643 0 1 1 1 367.25006 1099.73563 1099.73518 0.41 0.00015 0/0 0 0 63510008 HCD 30 MS2 26.54185 595.4 21.744 42.901 10769 10769 10768 QEplus033719.raw F4 1317.7 283.4 571.4 478 314.6 607.1 39 2.52 1 FALSE 0.003405 0.06614 0.098 -250 39524 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGIPPDQQR [K].eGIPPDQQR.[LV] N-Term(TMT6plex) 18 P62984; P62983 Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2;Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2 E9Q5F6; P62984; Q922Z8; Q922B0; Q3TH47; Q5SX22; E9Q4P0; P62983; Q78XY9; E9Q9J0; Q8R0Z9; B0LAC2; Q8C2K3; Q8VC46; A5JUZ1; A0A0A6YW67; E9QNP0; P0CG50 Polyubiquitin-C (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=1; Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Polyubiquitin-B (Fragment) OS=Mus musculus OX=10090 GN=Ubb PE=4 SV=2; KxDL motif-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2; Ubiquitin B OS=Mus musculus OX=10090 GN=Ubb PE=2 SV=1; 60S ribosomal protein L40 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=3 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiquitin A-52 residue ribosomal protein fusion product 1 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubb-ps PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiqutin subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Predicted pseudogene 8797 OS=Mus musculus OX=10090 GN=Gm8797 PE=4 SV=1; 60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Polyubiquitin-C OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=2 0 2 2 0.6746 0 1 1 1 634.84381 1268.68035 1268.67963 0.56 0.00036 0/0 0 0 51284032 HCD 30 MS2 4.041377 529 40.906 42.9058 10771 10771 10768 QEplus033719.raw F4 535.1 433.1 564.2 397.4 618.6 625.6 291 2.95 2 FALSE 5.44E-05 0.001802 0.608 -250 39526 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FDRPPAR [R].fDRPPAR.[R] N-Term(TMT6plex) 8 Q8BL97 Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1 Q8BL97; A0A3Q4L393; Q8BL97-4; A0A3Q4L335; A0A3Q4EGP0; Q8BL97-3; A0A3Q4EH04; Q3THA6 Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Serine/arginine-rich-splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Isoform 4 of Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7; Serine/arginine-rich-splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Serine/arginine-rich-splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Isoform 3 of Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7; Serine/arginine-rich-splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Srsf7 PE=2 SV=1 0 3 3 0.3643 0 1 1 1 363.21173 1087.62064 1087.62099 -0.33 -0.00012 0/0 0 0 42565800 HCD 30 MS2 14.13855 478.6 24.839 42.908 10772 10772 10768 QEplus033719.raw F4 534.2 430.9 525 355 510.6 516.1 337 2.58 1 FALSE 0.001456 0.02097 0.273 -250 39539 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDQICHR [K].vDQIcHR.[N] N-Term(TMT6plex); C5(Carbamidomethyl) 2 Q9R1T2 SUMO-activating enzyme subunit 1 OS=Mus musculus OX=10090 GN=Sae1 PE=1 SV=1 Q9R1T2; Q9R1T2-2 SUMO-activating enzyme subunit 1 OS=Mus musculus OX=10090 GN=Sae1 PE=1 SV=1; Isoform 2 of SUMO-activating enzyme subunit 1 OS=Mus musculus OX=10090 GN=Sae1 0 3 3 0.5153 0 1 1 1 386.20816 1156.60993 1156.60944 0.42 0.00016 0/0 0 0 22885700 HCD 30 MS2 44.34971 389.1 44.539 42.9125 10774 10774 10768 QEplus033719.raw F4 419.6 302.6 406.3 310 392.7 503.6 130 3.26 1 FALSE 0.0001187 0.003122 0.554 -250 39552 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNEADVR [R].vNEADVR.[D] N-Term(TMT6plex) 9 Q3UP61 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dlg1 PE=2 SV=1 Q571K0; S4R2T8; Q811D0-2; Q3UP61; H7BWY4; Q811D0; Q811D0-3; E9Q9H0; D3Z3B8 MKIAA4187 protein (Fragment) OS=Mus musculus OX=10090 GN=Dlg1 PE=2 SV=1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1; Isoform 2 of Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dlg1 PE=2 SV=1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1; Isoform 3 of Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1 0 2 2 0.3759 0 1 1 1 516.28833 1031.56938 1031.56829 1.06 0.00055 0/0 0 0 15553421 HCD 30 MS2 11.99994 883.6 110 42.9172 10776 10776 10768 QEplus033719.raw F4 905.6 799.3 959.4 691.8 989.3 956.3 265 2.66 1 FALSE 0.0002019 0.004072 0.525 -250 39560 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQHPDMSVTR [R].eQHPDMSVTR.[V] N-Term(TMT6plex) 14 O70318 Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2 Q811B2; Q7TPN6; B6ZHC6; O70318; A0A1W2P7I2; B6ZHD0; Q80UE5; Q8BSR4; A0A1W2P6H2; Q80UE3; Q80UE4; B6ZHC5; B6ZHC7; Q3UNQ6 Epb4.1l2 protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Epb4.1l2 protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; 4_1_CTD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Protein 4.1G OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1 0 3 3 0.707 0 1 1 1 476.90845 1428.71079 1428.71028 0.36 0.00017 0/0 0 0 14463132 HCD 30 MS2 34.48376 535 70.207 42.9195 10777 10777 10768 QEplus033719.raw F4 605.6 423.3 580.1 434.7 521.6 644.6 93 3.72 1 FALSE 1.14E-05 0.0003649 0.749 -250 39572 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAQEVDTYRR [R].tAQEVDTYRR.[S] N-Term(TMT6plex) 10 Q5U222 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1 B1ARC0; Q3UXW3; Q5U222; Q3V0Z8; B1ARB9; O35662; A1L333; S4R1I6; Q61656; Q8BTS0 RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=8; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=8; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Hlr1 PE=4 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 1 2 2 0.4684 0 1 1 1 734.39264 1467.778 1467.77532 1.83 0.00134 0/0 0 0 6217732.5 HCD 30 MS2 0 159.2 110 42.9293 10780 10780 10779 QEplus033719.raw F4 161.8 170.8 174.2 118.9 175.5 153.7 273 3.48 1 FALSE 1.14E-05 9.01E-07 1.246 -250 39582 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQADQFCQR [K].sQADQFcQR.[L] N-Term(TMT6plex); C7(Carbamidomethyl) 6 A2A9M4 Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=2 A2A9M4; A2A9M5; Q8R1A4-2; A0A0U1RNK7; E9PX48; Q8R1A4 Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=2; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=1; Isoform 2 of Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=1; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=2; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=3 0 2 2 0.7579 0 1 1 1 684.83087 1368.65447 1368.65276 1.24 0.00085 0/0 0 0 9178426 HCD 30 MS2 0 330.6 110 42.9318 10781 10781 10779 QEplus033719.raw F4 334.9 339.9 373.5 207.8 439 288.5 90 3.8 1 FALSE 1.14E-05 1.69E-05 1.004 -250 39595 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YVSHGATGK [K].yVSHGATGk.[G] N-Term(TMT6plex); K9(TMT6plex) 2 P16460 Argininosuccinate synthase OS=Mus musculus OX=10090 GN=Ass1 PE=1 SV=1 P16460; Q3UEJ7 Argininosuccinate synthase OS=Mus musculus OX=10090 GN=Ass1 PE=1 SV=1; Argininosuccinate synthase OS=Mus musculus OX=10090 GN=Ass1 PE=2 SV=1 0 3 3 0.6425 0 1 1 1 459.93509 1377.79071 1377.78907 1.19 0.00055 0/0 0 0 48218044 HCD 30 MS2 22.22513 651 26.076 42.9363 10783 10783 10779 QEplus033719.raw F4 810 517.6 757.9 639.4 611.9 568.9 500 4.28 1 FALSE 1.14E-05 6.45E-08 1.463 -250 39605 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YEEVAR [K].yEEVAR.[K] N-Term(TMT6plex) 38 E9Q456; G5E8R2; G5E8R1; P58774; Q8C7C3; A2AIM4; Q58E70; P58774-2; E9Q5J9; A0A0R4J1P2; E9Q450; Q6IRU2 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 E9Q456; Q9D1R6; E9Q455; G5E8R2; E9Q453; Q91VH3; G5E8R1; Q8BSH3; A0A571BEU1; D3Z6I8; E9Q452; P58774; F8WID5; A2RRI1; Q8C7C3; A2AIM4; Q3TJ53; Q58E70; D3Z2H9; Q3SX28; P58774-2; E9Q454; Q61344; E9Q5J9; A0A0R4J1P2; E9Q448; P21107; E9Q450; Q8K0Z5; G5E8R0; D3YVR0; Q564G1; B7ZNL3; Q8BP43; Q6IRU2; E9Q7Q3; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin 3, related sequence 7 OS=Mus musculus OX=10090 GN=Tpm3-rs7 PE=3 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=3; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 3, gamma OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 0 2 2 0.1942 0 1 1 1 498.27197 995.53667 995.53593 0.75 0.00037 0/0 0 0 22724258 HCD 30 MS2 18.6455 997.8 72.9 42.9408 10785 10785 10779 QEplus033719.raw F4 1129.3 773.4 1002.7 932.8 1034.3 1114.1 143 2.42 12 TRUE 0.002413 0.04789 0.148 -250 39613 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYCEYR [K].aYcEYR.[L] N-Term(TMT6plex); C3(Carbamidomethyl) 6 F8VQC1 Signal recognition particle subunit SRP72 OS=Mus musculus OX=10090 GN=Srp72 PE=1 SV=1 A0JLN1; Q3UZL8; E9Q740; F8VQC1; Q3UU23; A0PJ97 Srp72 protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1; Signal recognition particle subunit SRP72 OS=Mus musculus OX=10090 GN=Srp72 PE=1 SV=1; Signal recognition particle subunit SRP72 OS=Mus musculus OX=10090 GN=Srp72 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1; Srp72 protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1 0 2 2 0.504 0 1 1 1 545.76361 1090.51995 1090.5189 0.96 0.00052 0/0 0 0 11405097 HCD 30 MS2 48.09297 840.7 110 42.9433 10786 10786 10779 QEplus033719.raw F4 748.5 839.8 984.9 674.5 916.1 880.3 39 2.5 1 FALSE 0.003682 0.0706 0.086 -250 39615 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGISSGGEGVQDR [R].gGISSGGEGVQDR.[D] N-Term(TMT6plex) 3 Q059U9 A kinase (PRKA) anchor protein 8 OS=Mus musculus OX=10090 GN=Akap8 PE=1 SV=1 Q059U9; A0A494B9I1; A0A494BAZ0 A kinase (PRKA) anchor protein 8 OS=Mus musculus OX=10090 GN=Akap8 PE=1 SV=1; A-kinase anchor protein 8 OS=Mus musculus OX=10090 GN=Akap8 PE=1 SV=1; A-kinase anchor protein 8 (Fragment) OS=Mus musculus OX=10090 GN=Akap8 PE=1 SV=1 0 2 2 0.6875 0 1 1 1 724.37134 1447.7354 1447.73385 1.07 0.00077 0/0 0 0 6821872 HCD 30 MS2 15.92079 282.2 110 42.9459 10787 10787 10779 QEplus033719.raw F4 284.4 262 323.6 206.9 296.4 319.9 183 4.48 1 FALSE 1.14E-05 2.48E-12 2.302 -250 39657 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIEEAACSRR [R].tIEEAAcSRR.[A] N-Term(TMT6plex); C7(Carbamidomethyl) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 1 3 3 0.5475 0 1 1 1 474.58389 1421.73713 1421.73683 0.21 0.0001 0/0 0 0 17028692 HCD 30 MS2 33.24829 728.7 110 42.9747 10798 10798 10790 QEplus033719.raw F4 833.4 535.7 834 623.5 727.4 817.9 261 4 1 FALSE 1.14E-05 3.46E-10 1.895 -250 39666 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LASRPTRPQEPR [K].lASRPTRPQEPR.[H] N-Term(TMT6plex) 3 Z4YJT3 La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1 PE=1 SV=1 Q3UU34; Z4YJT3; Q6ZQ58 HTH La-type RNA-binding domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Larp1 PE=2 SV=1; La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1 PE=1 SV=1; La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1 PE=1 SV=3 0 4 4 0.5236 0 1 1 1 409.99173 1636.94509 1636.94445 0.39 0.00016 0/0 0 0 15760755 HCD 30 MS2 57.22668 501.1 52.209 42.977 10799 10799 10790 QEplus033719.raw F4 590.9 352.4 515.3 450.7 532 565.3 471 2.96 1 FALSE 0.00079 0.01109 0.387 -250 39674 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQQEGFK [R].rQQEGFk.[G] N-Term(TMT6plex); K7(TMT6plex) 6 Q3TMM5; Q3UM20 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1 Q3TMM5; Q3TTV7; Q3TFC2; Q3UM20; Q3TF40; Q99K48 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Non-POU domain-containing octamer-binding protein OS=Mus musculus OX=10090 GN=Nono PE=1 SV=3 1 3 3 0.3623 0 1 1 1 450.93506 1350.79062 1350.7894 0.9 0.00041 0/0 0 0 14434813 HCD 30 MS2 41.47538 1360.2 110 42.9795 10800 10800 10790 QEplus033719.raw F4 1597.7 1082.4 1343.6 1165.3 1786.2 1185.8 461 2.65 2 FALSE 1.14E-05 0.0001679 0.814 -250 39681 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEDEMMR [K].qEDEMMR.[A] N-Term(TMT6plex) 5 Q9JM76 Actin-related protein 2/3 complex subunit 3 OS=Mus musculus OX=10090 GN=Arpc3 PE=1 SV=3 Q9JM76; H7BWZ3; D3Z2F8; D3Z2F7; A0A0G2JFK7 Actin-related protein 2/3 complex subunit 3 OS=Mus musculus OX=10090 GN=Arpc3 PE=1 SV=3; Actin-related protein 2/3 complex subunit 3 OS=Mus musculus OX=10090 GN=Arpc3 PE=1 SV=1; Actin-related protein 2/3 complex subunit 3 OS=Mus musculus OX=10090 GN=Arpc3 PE=1 SV=1; Actin-related protein 2/3 complex subunit 3 OS=Mus musculus OX=10090 GN=Arpc3 PE=1 SV=1; Actin-related protein 2/3 complex subunit 3 (Fragment) OS=Mus musculus OX=10090 GN=Arpc3 PE=1 SV=1 0 2 2 0.4567 0 1 1 1 584.271 1167.53472 1167.53356 0.99 0.00058 0/0 0 0 58515580 HCD 30 MS2 19.21175 643.2 26.639 42.9868 10802 10802 10801 QEplus033719.raw F4 705.3 554.8 682.6 516.2 774.5 625.6 26 2.54 1 FALSE 0.001607 0.02523 0.243 -250 39686 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPEQLR [K].ePEQLR.[K] N-Term(TMT6plex) 14 Q3UK83; Q5FB19 Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1;Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1 Q8BG05-2; Q3TFB1; Q3UK83; P49312; Q3U7F3; Q6PFA7; P49312-2; Q3TIK8; Q3UZG3; Q5EBP8; Q5FB19; B2RXM2; A2AL12; Q6P6I7 Isoform 2 of Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=2; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Hnrpa3 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Isoform Short of Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; EG627828 protein OS=Mus musculus OX=10090 GN=Gm6793 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1; Hnrpa3 protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1 0 2 2 0.1749 0 1 1 1 500.78488 1000.56249 1000.56248 0.01 0.00001 0/0 0 0 19102214 HCD 30 MS2 23.59171 712.6 75.613 42.989 10803 10803 10801 QEplus033719.raw F4 807.9 568.8 720.2 546.8 842.4 789.7 124 1.83 2 FALSE 0.003397 0.06551 0.099 -250 39699 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQSQLTATQTR [K].eQSQLTATQTR.[T] N-Term(TMT6plex) 2 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 Q3TI71; Q99PV0 MPN domain-containing protein OS=Mus musculus OX=10090 GN=Prpf8 PE=2 SV=1; Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 0 2 2 0.6136 0 1 1 1 746.4035 1491.79973 1491.79645 2.2 0.00164 0/0 0 0 13976681 HCD 30 MS2 19.15485 390.8 110 42.994 10805 10805 10801 QEplus033719.raw F4 395.8 400.8 400.1 310.2 461.5 376.2 322 4.27 1 FALSE 1.14E-05 2.15E-09 1.744 -250 39711 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPIAASTNR [K].ePIAASTNR.[G] N-Term(TMT6plex) 11 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" Q3URW8; B9EKJ1; E9Q447; B2RXX6; A3KGU9; Q3V1V5; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.5809 0 1 1 1 594.33252 1187.65776 1187.65817 -0.34 -0.0002 0/0 0 0 7200049.5 HCD 30 MS2 35.14598 520.9 110 43.0016 10808 10808 10801 QEplus033719.raw F4 814.2 368.3 529.3 347.5 483.7 582.4 329 3.03 2 FALSE 1.14E-05 1.14E-06 1.227 -250 39734 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQPPGAQASK [K].sQPPGAQASk.[T] N-Term(TMT6plex); K10(TMT6plex) 7 Q91YE8 Synaptopodin-2 OS=Mus musculus OX=10090 GN=Synpo2 PE=1 SV=2 Q91YE8-2; B2RY03; Q91YE8; E9Q1U2; D3YVV9; A0A498WGE8; A0A0G2JDM5 Isoform 2 of Synaptopodin-2 OS=Mus musculus OX=10090 GN=Synpo2; Synaptopodin 2 OS=Mus musculus OX=10090 GN=Synpo2 PE=2 SV=1; Synaptopodin-2 OS=Mus musculus OX=10090 GN=Synpo2 PE=1 SV=2; Synaptopodin-2 OS=Mus musculus OX=10090 GN=Synpo2 PE=1 SV=1; Synaptopodin-2 OS=Mus musculus OX=10090 GN=Synpo2 PE=1 SV=1; Synaptopodin-2 OS=Mus musculus OX=10090 GN=Synpo2 PE=1 SV=1; Synaptopodin-2 (Fragment) OS=Mus musculus OX=10090 GN=Synpo2 PE=1 SV=1 0 2 2 0.3724 0 1 1 1 714.91357 1428.81987 1428.8211 -0.86 -0.00061 0/0 0 0 3738391.5 HCD 30 MS2 49.85409 309.8 110 43.0091 10811 10811 10801 QEplus033719.raw F4 361.2 209.1 347 303.2 285.8 352.6 374 2.39 1 FALSE 5.44E-05 0.002071 0.595 -250 39743 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSPADGTR [K].lSPADGTR.[G] N-Term(TMT6plex) 7 Q60847 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3 Q60847; Q60847-3; E9PX70; Q3TNZ7; Q60847-5; Q60847-4; Q60847-2 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3; Isoform 3 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=1; Isoform 5 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 4 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 2 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 0 2 2 0.5714 0 1 1 1 523.29602 1045.58476 1045.58394 0.79 0.00041 0/0 0 0 37840972 HCD 30 MS2 20.77513 639 34.393 43.0164 10813 10813 10812 QEplus033719.raw F4 533.6 593.1 630.7 327.7 1213.3 535.6 282 2.38 1 FALSE 0.001248 0.017 0.31 -250 39749 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEAAAGSGSTGEGDGK [K].eEAAAGSGSTGEGDGk.[A] N-Term(TMT6plex); K16(TMT6plex) 4 Q3ULJ5 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 Q3ULJ5; Q3U5M8; P14685; Q8BK46 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus OX=10090 GN=Psmd3 PE=1 SV=3; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 0 3 3 0.7928 0 1 1 1 627.64642 1880.92472 1880.92379 0.5 0.00031 0/0 0 0 16778444 HCD 30 MS2 21.54126 492 110 43.0189 10814 10814 10812 QEplus033719.raw F4 633.8 332.7 558 418.7 475.5 533.4 149 5.26 1 FALSE 1.14E-05 3.81E-14 2.646 -250 39764 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVFQHSQSR [K].dVFQHSQSR.[T] N-Term(TMT6plex) 1 Q6A0A9 Constitutive coactivator of PPAR-gamma-like protein 1 OS=Mus musculus OX=10090 GN=FAM120A PE=1 SV=2 Q6A0A9 Constitutive coactivator of PPAR-gamma-like protein 1 OS=Mus musculus OX=10090 GN=FAM120A PE=1 SV=2 0 3 3 0.6129 0 1 1 1 444.90012 1332.68579 1332.68578 0.01 0.00001 0/0 0 0 15877242 HCD 30 MS2 46.73286 763.6 60.225 43.0302 10819 10819 10812 QEplus033719.raw F4 801.8 635.6 810.9 617.8 938.9 776.6 210 3.41 1 FALSE 0.0009356 0.01282 0.361 -250 39779 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSGEFECR [R].dSGEFEcR.[T] N-Term(TMT6plex); C7(Carbamidomethyl) 4 D3YYU8 Obscurin-like protein 1 OS=Mus musculus OX=10090 GN=Obsl1 PE=1 SV=1 A0A0B4J1L4; D3YYU8-2; D3YYU8; A0A0A0MQG1 Obscurin-like protein 1 OS=Mus musculus OX=10090 GN=Obsl1 PE=1 SV=1; Isoform 2 of Obscurin-like protein 1 OS=Mus musculus OX=10090 GN=Obsl1; Obscurin-like protein 1 OS=Mus musculus OX=10090 GN=Obsl1 PE=1 SV=1; Obscurin-like protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Obsl1 PE=1 SV=1 0 2 2 0.6235 0 1 1 1 614.77783 1228.54839 1228.54657 1.48 0.00091 0/0 0 0 7507242.5 HCD 30 MS2 10.91128 534.2 110 43.0352 10821 10821 10812 QEplus033719.raw F4 698.6 169.1 517.5 757.2 229.4 833.5 11 2.47 1 FALSE 0.0005373 0.008192 0.436 -250 39791 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TASFSESR [R].tASFSESR.[A] N-Term(TMT6plex) 5 Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1;ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TS02; Q3TED3; Q3UEA1; Q3V117; Q91V92 ATP citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate (pro-S-)-lyase (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 0 2 2 0.5474 0 1 1 1 557.29114 1113.575 1113.57377 1.1 0.00062 0/0 0 0 68192392 HCD 30 MS2 8.264044 550.5 28.05 43.0448 10824 10824 10823 QEplus033719.raw F4 521.8 615.9 615.7 396.6 623.2 530 97 2.74 2 FALSE 1.14E-05 0.0006318 0.702 -250 39797 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTQYER [R].vTQYER.[D] N-Term(TMT6plex) 5 Q6NZD2 Sorting nexin-1 OS=Mus musculus OX=10090 GN=Snx1 PE=1 SV=1 Q6NZD2; Q3TI63; Q3U4S1; Q3UDY9; Q9WV80 Sorting nexin-1 OS=Mus musculus OX=10090 GN=Snx1 PE=1 SV=1; Sorting nexin-1 OS=Mus musculus OX=10090 GN=Snx1 PE=2 SV=1; Sorting nexin-1 OS=Mus musculus OX=10090 GN=Snx1 PE=2 SV=1; Sorting nexin-1 (Fragment) OS=Mus musculus OX=10090 GN=Snx1 PE=2 SV=1; Sorting nexin-1 OS=Mus musculus OX=10090 GN=Snx1 PE=1 SV=1 0 2 2 0.3 0 1 1 1 512.78687 1024.56645 1024.56248 3.88 0.00199 0/0 0 0 13072796 HCD 30 MS2 27.64473 1096 110 43.0473 10825 10825 10823 QEplus033719.raw F4 1123.1 925.7 1133 911.4 1370.1 1112.9 177 1.9 1 FALSE 0.003092 0.06026 0.113 -250 39821 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVASVCR [K].dVASVcR.[Q] N-Term(TMT6plex); C6(Carbamidomethyl) 2 Q99LB6 Methionine adenosyltransferase 2 subunit beta OS=Mus musculus OX=10090 GN=Mat2b PE=1 SV=1 Q99LB6-2; Q99LB6 Isoform 2 of Methionine adenosyltransferase 2 subunit beta OS=Mus musculus OX=10090 GN=Mat2b; Methionine adenosyltransferase 2 subunit beta OS=Mus musculus OX=10090 GN=Mat2b PE=1 SV=1 0 2 2 0.1192 0 1 1 1 518.27667 1035.54607 1035.54545 0.6 0.00031 0/0 0 0 10660263 HCD 30 MS2 19.97417 869.3 110 43.0546 10828 10828 10823 QEplus033719.raw F4 969.3 694.1 887.1 806.6 943.1 915.9 140 1.93 1 FALSE 0.0007341 0.01051 0.396 -250 39830 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YGGEAQMR [R].yGGEAQMR.[F] N-Term(TMT6plex) 6 Q3UL43 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nup155 PE=2 SV=1 Q3UL43; Q99P88; Q6ZQ45; Q80X48; Q8BUA6; A0A2R8VHH1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nup155 PE=2 SV=1; Nuclear pore complex protein Nup155 OS=Mus musculus OX=10090 GN=Nup155 PE=1 SV=1; MKIAA0791 protein (Fragment) OS=Mus musculus OX=10090 GN=Nup155 PE=2 SV=1; Nucleoporin 155 OS=Mus musculus OX=10090 GN=Nup155 PE=2 SV=1; Nucleoporin_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Nup155 PE=2 SV=1; Nuclear pore complex protein Nup155 OS=Mus musculus OX=10090 GN=Nup155 PE=1 SV=1 0 2 2 0.6641 0 1 1 1 570.78729 1140.56731 1140.56691 0.35 0.0002 0/0 0 0 8075130 HCD 30 MS2 23.95358 655 110 43.0571 10829 10829 10823 QEplus033719.raw F4 696.3 600.9 713.1 536.7 723 659.9 77 2.59 1 FALSE 0.0002518 0.005094 0.499 -250 39847 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESQAALEER [K].eSQAALEER.[E] N-Term(TMT6plex) 3 Q9EQQ9 Protein O-GlcNAcase OS=Mus musculus OX=10090 GN=Oga PE=1 SV=2 Q9EQQ9; Q9EQQ9-3; A0A494BAA3 Protein O-GlcNAcase OS=Mus musculus OX=10090 GN=Oga PE=1 SV=2; Isoform 3 of Protein O-GlcNAcase OS=Mus musculus OX=10090 GN=Oga; Protein O-GlcNAcase (Fragment) OS=Mus musculus OX=10090 GN=Oga PE=1 SV=1 0 2 2 0.4421 0 1 1 1 631.3324 1261.65752 1261.65856 -0.83 -0.00052 0/0 0 0 6318674.5 HCD 30 MS2 0 364.2 110 43.0621 10831 10831 10823 QEplus033719.raw F4 387.6 334.8 378.9 331.4 381.3 371.3 189 2.85 1 FALSE 1.14E-05 0.0003801 0.745 -250 39859 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TASNLAAAR [R].tASNLAAAR.[L] N-Term(TMT6plex) 11 Q8BSQ9 Protein polybromo-1 OS=Mus musculus OX=10090 GN=Pbrm1 PE=1 SV=4 Q8BSQ9; E9Q4Y5; D3YYF2; D3Z1N4; D6RI94; D3Z1W6; D6RIL0; E9Q7L3; E9Q7L2; F8VQD1; F6THL5 Protein polybromo-1 OS=Mus musculus OX=10090 GN=Pbrm1 PE=1 SV=4; Protein polybromo-1 OS=Mus musculus OX=10090 GN=Pbrm1 PE=1 SV=1; Protein polybromo-1 (Fragment) OS=Mus musculus OX=10090 GN=Pbrm1 PE=1 SV=8; Protein polybromo-1 OS=Mus musculus OX=10090 GN=Pbrm1 PE=1 SV=1; Protein polybromo-1 OS=Mus musculus OX=10090 GN=Pbrm1 PE=1 SV=1; Protein polybromo-1 OS=Mus musculus OX=10090 GN=Pbrm1 PE=1 SV=1; Protein polybromo-1 OS=Mus musculus OX=10090 GN=Pbrm1 PE=1 SV=1; Protein polybromo-1 OS=Mus musculus OX=10090 GN=Pbrm1 PE=1 SV=1; Protein polybromo-1 OS=Mus musculus OX=10090 GN=Pbrm1 PE=1 SV=1; Protein polybromo-1 OS=Mus musculus OX=10090 GN=Pbrm1 PE=1 SV=1; Protein polybromo-1 (Fragment) OS=Mus musculus OX=10090 GN=Pbrm1 PE=1 SV=1 0 2 2 0.4191 0 1 1 1 552.32446 1103.64165 1103.63704 4.18 0.00231 0/0 0 0 4330804 HCD 30 MS2 28.60443 514.8 110 43.0671 10833 10833 10823 QEplus033719.raw F4 590.6 443.8 538.6 398 589.3 528.5 306 2.72 1 FALSE 1.14E-05 5.01E-05 0.914 -250 39868 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCLVGSGQR [K].ncLVGSGQR.[I] N-Term(TMT6plex); C2(Carbamidomethyl) 3 A4FUS0 Eif2b3 protein OS=Mus musculus OX=10090 GN=Eif2b3 PE=2 SV=1 A4FUS0; B1AUN2; A0AUM9 "Eif2b3 protein OS=Mus musculus OX=10090 GN=Eif2b3 PE=2 SV=1; Eukaryotic translation initiation factor 2B, subunit 3 OS=Mus musculus OX=10090 GN=Eif2b3 PE=1 SV=1; Eif2b3 protein OS=Mus musculus OX=10090 GN=Eif2b3 PE=2 SV=2" 0 2 2 0.5053 0 1 1 1 610.32568 1219.64409 1219.64147 2.15 0.00131 0/0 0 0 22232006 HCD 30 MS2 16.29788 729.9 110 43.0744 10835 10835 10834 QEplus033719.raw F4 772.1 580.9 814.4 655.3 742.6 814.3 212 2.81 1 FALSE 1.14E-05 1.31E-05 1.025 -250 39889 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLAAVEER [K].hLAAVEER.[K] N-Term(TMT6plex) 8 P97496; Q3UID0 SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=2;SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=1 P97496; Q3UPK0; Q6PDG5-2; Q3UID0; Q6PDG5; P97496-2; Q3UMX0; Q3UNN4 SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Smarcc1 PE=2 SV=1; Isoform 2 of SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2; SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=1; SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=2; Isoform 2 of SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Smarcc1 PE=2 SV=1; SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=1 0 3 3 0.2219 0 1 1 1 385.22263 1153.65332 1153.65269 0.55 0.00021 0/0 0 0 32670430 HCD 30 MS2 22.22888 391 38.898 43.0859 10840 10840 10834 QEplus033719.raw F4 507.4 297.4 383.4 279.7 428.3 449.7 250 3.74 2 FALSE 1.14E-05 2.21E-05 0.982 -250 39896 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YQSNPK [K].yQSNPk.[V] N-Term(TMT6plex); K6(TMT6plex) 6 Q3U9V1 TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1 F8WJK8; Q3U9V1; Q3U8D2; Q3U3N7; Q3TGW8; Q99L47 Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1 0 2 2 0.5481 0 1 1 1 597.84857 1194.68987 1194.68829 1.32 0.00079 0/0 0 0 14302355 HCD 30 MS2 30.95709 1081.4 110 43.0885 10841 10841 10834 QEplus033719.raw F4 1830.2 751.6 1262.1 828.7 735.8 1079.8 335 2.08 1 FALSE 0.003372 0.06511 0.1 -250 39910 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAGQTGMCGGVR [K].tAGQTGMcGGVR.[G] N-Term(TMT6plex); C8(Carbamidomethyl) 1 Q80SY5 Pre-mRNA-splicing factor 38B OS=Mus musculus OX=10090 GN=Prpf38b PE=1 SV=1 Q80SY5 Pre-mRNA-splicing factor 38B OS=Mus musculus OX=10090 GN=Prpf38b PE=1 SV=1 0 2 2 0.7 0 1 1 1 712.35358 1423.69988 1423.69833 1.08 0.00077 0/0 0 0 6536742 HCD 30 MS2 0 224.6 110 43.0935 10843 10843 10834 QEplus033719.raw F4 243.6 199.3 255.6 152.3 258.6 238.2 121 3.5 1 FALSE 1.14E-05 2.82E-10 1.911 -250 39917 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASATAPEVR [K].aSATAPEVR.[D] N-Term(TMT6plex) 1 Q9D0G0 "28S ribosomal protein S30, mitochondrial OS=Mus musculus OX=10090 GN=Mrps30 PE=1 SV=1" Q9D0G0 "28S ribosomal protein S30, mitochondrial OS=Mus musculus OX=10090 GN=Mrps30 PE=1 SV=1" 0 2 2 0.5097 0 1 1 1 565.82172 1130.63616 1130.6367 -0.48 -0.00027 0/0 0 0 6246417.5 HCD 30 MS2 27.42488 563.2 110 43.096 10844 10844 10834 QEplus033719.raw F4 555.8 476.6 698.8 518.4 552.4 576.9 268 3.1 1 FALSE 1.14E-05 7.57E-06 1.07 -250 39933 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVFQHSQSR [K].dVFQHSQSR.[T] N-Term(TMT6plex) 1 Q6A0A9 Constitutive coactivator of PPAR-gamma-like protein 1 OS=Mus musculus OX=10090 GN=FAM120A PE=1 SV=2 Q6A0A9 Constitutive coactivator of PPAR-gamma-like protein 1 OS=Mus musculus OX=10090 GN=FAM120A PE=1 SV=2 0 2 2 0.5449 0 1 1 1 666.8465 1332.68572 1332.68578 -0.05 -0.00003 0/0 0 0 3736657.25 HCD 30 MS2 15.22519 203 110 43.1058 10847 10847 10845 QEplus033719.raw F4 204.7 198.8 224 145.5 250.3 194.5 210 3.01 1 FALSE 1.14E-05 1.13E-05 1.037 -250 39942 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGPPVGGHR [R].mGPPVGGHR.[R] N-Term(TMT6plex) 4 G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 Q8R081; G3UY38; Q3UMT7; G5E924 Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 0 3 3 0.6371 0 1 1 1 379.54498 1136.6204 1136.61961 0.69 0.00026 0/0 0 0 78412896 HCD 30 MS2 33.13946 218.6 15.75 43.1126 10850 10850 10845 QEplus033719.raw F4 228.9 151.4 219 220.4 249.9 241.8 245 2.48 1 FALSE 1.14E-05 0.0005022 0.722 -250 39946 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVYRPQGGGR [R].vVYRPQGGGR.[Q] N-Term(TMT6plex) 4 Q60847 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3 Q60847; E9PX70; Q60847-5; Q60847-2 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3; Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1; Isoform 5 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 2 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 0 3 3 0.4924 0 1 1 1 439.92462 1317.75931 1317.75888 0.32 0.00014 0/0 0 0 36679496 HCD 30 MS2 38.80036 663.4 21.958 43.1148 10851 10851 10845 QEplus033719.raw F4 748 471.5 671.2 495.7 1032.5 561.2 416 2.64 1 FALSE 5.44E-05 0.002392 0.581 -250 39987 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVQQLADQR [R].rVQQLADQR.[Q] N-Term(TMT6plex) 3 Q3TW96 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus OX=10090 GN=Uap1l1 PE=1 SV=1 Q3TW96; Q3TW96-2; Q8BVK3 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus OX=10090 GN=Uap1l1 PE=1 SV=1; Isoform 2 of UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus OX=10090 GN=Uap1l1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Uap1l1 PE=2 SV=1 1 2 2 0.4211 0 1 1 1 671.89075 1342.77422 1342.77526 -0.78 -0.00052 0/0 0 0 2851079.75 HCD 30 MS2 0 133.4 110 43.132 10857 10857 10856 QEplus033719.raw F4 166.7 97.8 133.5 131.2 131.4 139.6 351 2.47 1 FALSE 0.0002323 0.004734 0.508 -250 40000 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDHFEEAMR [R].rDHFEEAMR.[F] N-Term(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 1 3 3 0.5534 0 1 1 1 473.90552 1419.702 1419.70005 1.37 0.00065 0/0 0 0 14455378 HCD 30 MS2 39.2737 758.5 92.639 43.139 10860 10860 10856 QEplus033719.raw F4 797.8 642 853 673.1 699.3 885.9 119 4.68 1 FALSE 1.14E-05 4.86E-08 1.487 -250 40030 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVTPERR [R].iVTPERR.[E] N-Term(TMT6plex) 1 A2AMM0 Caveolae-associated protein 4 OS=Mus musculus OX=10090 GN=Cavin4 PE=1 SV=1 A2AMM0 Caveolae-associated protein 4 OS=Mus musculus OX=10090 GN=Cavin4 PE=1 SV=1 1 3 3 0.4667 0 1 1 1 367.23209 1099.68171 1099.67851 2.91 0.00107 0/0 0 0 96255232 HCD 30 MS2 29.04954 379.3 11.201 43.1513 10865 10865 10856 QEplus033719.raw F4 451.5 230.5 404.1 397 302.4 490 184 2.55 1 FALSE 0.002071 0.03851 0.18 -250 40045 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSEEQYNK [K].nSEEQYNk.[I] N-Term(TMT6plex); K8(TMT6plex) 5 Q8BTX6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Mtrex PE=2 SV=1 Q8BVI7; Q91YT4; Q8BTX6; Q9CZU3; Q6ZQK1 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Mtrex PE=2 SV=1; Skiv2l2 protein (Fragment) OS=Mus musculus OX=10090 GN=Mtrex PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Mtrex PE=2 SV=1; Exosome RNA helicase MTR4 OS=Mus musculus OX=10090 GN=Mtrex PE=1 SV=1; MKIAA0052 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0052 PE=4 SV=1 0 2 2 0.5676 0 1 1 1 735.38782 1469.76836 1469.76364 3.21 0.00236 0/0 0 0 1974965.75 HCD 30 MS2 0 160.7 110 43.1609 10868 10868 10867 QEplus033719.raw F4 166.5 144.6 162.7 133.7 222.2 134.5 242 3.33 1 FALSE 1.14E-05 2.78E-05 0.963 -250 40056 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELVTNR [R].eLVTNR.[T] N-Term(TMT6plex) 5 Q60597 "2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh PE=1 SV=3" Q60597-4; Q60597-3; Q60597-2; Q60597; Z4YJV4 "Isoform 4 of 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh; Isoform 3 of 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh; Isoform 2 of 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh; 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh PE=1 SV=3; Oxoglutarate dehydrogenase (succinyl-transferring) OS=Mus musculus OX=10090 GN=Ogdh PE=1 SV=1" 0 2 2 0.2699 0 1 1 1 480.78781 960.56835 960.56756 0.82 0.00039 0/0 0 0 92615976 HCD 30 MS2 41.96123 542.7 9.406 43.1656 10870 10870 10867 QEplus033719.raw F4 546.4 433.6 544.3 589.9 538.4 603.4 208 1.63 1 FALSE 0.00557 0.094 0.023 -250 40061 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLTHPIR [R].gLTHPIR.[M] N-Term(TMT6plex) 2 P10649 Glutathione S-transferase Mu 1 OS=Mus musculus OX=10090 GN=Gstm1 PE=1 SV=2 P10649; A2AE89 Glutathione S-transferase Mu 1 OS=Mus musculus OX=10090 GN=Gstm1 PE=1 SV=2; Glutathione transferase OS=Mus musculus OX=10090 GN=Gstm1 PE=1 SV=2 0 2 2 0.4836 0 1 1 1 511.81967 1022.63207 1022.63083 1.21 0.00062 0/0 0 0 30555630 HCD 30 MS2 22.31042 718 40.543 43.1679 10871 10871 10867 QEplus033719.raw F4 730.2 705.5 822.8 517.1 829.8 702.5 49 2.75 1 FALSE 0.0008805 0.0122 0.37 -250 40064 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVVSEIR [R].hVVSEIR.[R] N-Term(TMT6plex) 4 Q80UL3 Galactokinase 1 OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1 Q80UL3; Q9R0N0; Q9CXZ9; Q9CWW5 Galactokinase 1 OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1; Galactokinase OS=Mus musculus OX=10090 GN=Galk1 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1 0 3 3 0.4948 0 1 1 1 356.8837 1068.63654 1068.63631 0.22 0.00008 0/0 0 0 25056146 HCD 30 MS2 34.60577 421.3 40.088 43.1701 10872 10872 10867 QEplus033719.raw F4 588.7 258.1 464.2 351.3 383.7 481.8 78 2.87 1 FALSE 0.0007626 0.01065 0.394 -250 40070 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGPPVGGHR [R].mGPPVGGHR.[R] N-Term(TMT6plex) 4 G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 Q8R081; G3UY38; Q3UMT7; G5E924 Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 0 2 2 0.4234 0 1 1 1 568.81421 1136.62114 1136.61961 1.34 0.00076 0/0 0 0 14969547 HCD 30 MS2 31.42699 808.7 110 43.1726 10873 10873 10867 QEplus033719.raw F4 770.9 767.8 914.5 640.7 881.5 876.7 244 2.74 1 FALSE 0.001108 0.01431 0.341 -250 40084 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECWEQEHEER [K].ecWEQEHEER.[E] N-Term(TMT6plex); C2(Carbamidomethyl) 4 F6QC77 "Troponin I, slow skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1" F6QC77; Q9WUZ5; D3YTL4; D3YUN3 "Troponin I, slow skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1; Troponin I, slow skeletal muscle OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=3; Troponin I, slow skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1; Troponin I, slow skeletal muscle OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1" 0 3 3 0.7705 0 1 1 1 554.24622 1660.72409 1660.7223 1.08 0.0006 0/0 0 0 4223181.5 HCD 30 MS2 50.70956 536.5 110 43.1775 10875 10875 10867 QEplus033719.raw F4 623.2 422.6 587.2 449.4 492.1 644.3 8 4.14 1 FALSE 1.14E-05 7.00E-06 1.077 -250 40087 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPPPASAVQR [R].sPPPASAVQR.[V] N-Term(TMT6plex) 1 Q3U425 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pom121 PE=1 SV=1 Q3U425 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pom121 PE=1 SV=1 0 2 2 0.4221 0 1 1 1 619.85748 1238.70769 1238.70545 1.81 0.00112 0/0 0 0 2446870.25 HCD 30 MS2 39.11343 349.7 110 43.18 10876 10876 10867 QEplus033719.raw F4 417.6 259.6 382.8 286.3 384.9 366.8 287 2.44 1 FALSE 5.44E-05 0.00254 0.575 -250 40112 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIYGER [K].sIYGER.[F] N-Term(TMT6plex) 1 P24369 Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus OX=10090 GN=Ppib PE=1 SV=2 P24369 Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus OX=10090 GN=Ppib PE=1 SV=2 0 2 2 0.3147 0 1 1 2 477.26678 953.52629 953.52536 0.98 0.00047 0/0 0 0 69806384 HCD 30 MS2 22.8331 712.7 18.341 43.1966 10882 10882 10878 QEplus033719.raw F4 726.4 604.5 790.7 593.7 845.9 715.1 87 2.32 1 FALSE 0.00566 0.09513 0.02 -250 40127 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSADWER [K].gSADWER.[V] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.4756 0 1 1 1 525.26483 1049.52239 1049.52134 1 0.00052 0/0 0 0 22536644 HCD 30 MS2 48.36372 883.3 70.827 43.2011 10884 10884 10878 QEplus033719.raw F4 1000.7 475.3 772.3 1286.1 640.1 1125.5 130 2.25 2 FALSE 0.0002909 0.005964 0.479 -250 40149 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGAHLK [K].aGAHLk.[G] N-Term(TMT6plex); K6(TMT6plex) 6 A0A0A0MQF6 Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 A0A1D5RLD8; A0A0A0MQF6; P16858; S4R1W1; Q6IWE3; S4R257 Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm10358 PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=2; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm3839 PE=1 SV=1; Glyceraldehyde-3-phosphate-dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapd PE=2 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 0 2 2 0.3868 0 1 1 1 527.84296 1054.67864 1054.67734 1.23 0.00065 0/0 0 0 12665663 HCD 30 MS2 22.4612 1166.6 110 43.2104 10888 10888 10878 QEplus033719.raw F4 2950.2 505.9 890.8 671.5 519.3 1461.9 62 2.12 1 FALSE 0.004873 0.08523 0.047 -250 40167 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGAHLK [K].aGAHLk.[G] N-Term(TMT6plex); K6(TMT6plex) 6 A0A0A0MQF6 Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 A0A1D5RLD8; A0A0A0MQF6; P16858; S4R1W1; Q6IWE3; S4R257 Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm10358 PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=2; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm3839 PE=1 SV=1; Glyceraldehyde-3-phosphate-dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapd PE=2 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 0 3 3 0.6347 0 1 1 1 352.23099 1054.67841 1054.67734 1.02 0.00036 0/0 0 0 138819872 HCD 30 MS2 9.860214 494.5 8.952 43.2222 10892 10892 10889 QEplus033719.raw F4 1462.9 166.6 334.5 257.4 105 640.5 62 2.71 1 FALSE 0.003658 0.07007 0.087 -250 40177 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAVTHIGR [R].dAVTHIGR.[V] N-Term(TMT6plex) 5 A0A0G2JGT5 Eukaryotic translation initiation factor 4E (Fragment) OS=Mus musculus OX=10090 GN=Eif4e PE=1 SV=1 Q8C470; A0A0G2JGT5; Q3TK95; A0A0G2JH04; A0A0G2JFB4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Eif4e PE=2 SV=1; Eukaryotic translation initiation factor 4E (Fragment) OS=Mus musculus OX=10090 GN=Eif4e PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Eif4e PE=1 SV=1; Eukaryotic translation initiation factor 4E OS=Mus musculus OX=10090 GN=Eif4e PE=1 SV=1; Eukaryotic translation initiation factor 4E OS=Mus musculus OX=10090 GN=Eif4e PE=1 SV=1 0 3 3 0.5432 0 1 1 1 366.54767 1097.62845 1097.62647 1.8 0.00066 0/0 0 0 72926096 HCD 30 MS2 15.40662 256.6 15.574 43.2244 10893 10893 10889 QEplus033719.raw F4 262.5 217.4 273.2 232.1 258.7 295.5 129 4.05 1 FALSE 5.44E-05 0.002582 0.573 -250 40186 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DMAAVQR [K].dMAAVQR.[T] N-Term(TMT6plex) 3 P37804; Q9R1Q8 Transgelin OS=Mus musculus OX=10090 GN=Tagln PE=1 SV=3;Transgelin-3 OS=Mus musculus OX=10090 GN=Tagln3 PE=1 SV=1 P37804; Q9D6K2; Q9R1Q8 Transgelin OS=Mus musculus OX=10090 GN=Tagln PE=1 SV=3; Transgelin OS=Mus musculus OX=10090 GN=Tagln3 PE=2 SV=1; Transgelin-3 OS=Mus musculus OX=10090 GN=Tagln3 PE=1 SV=1 0 2 2 0.3293 0 1 1 1 510.27954 1019.55181 1019.55053 1.25 0.00064 0/0 0 0 70571624 HCD 30 MS2 26.61838 595.5 13.821 43.2267 10894 10894 10889 QEplus033719.raw F4 634.5 442.1 532.1 339.3 1084.1 541.1 266 2.46 2 FALSE 0.0003803 0.006982 0.458 -250 40195 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDHFEEAMR [R].rDHFEEAMR.[F] N-Term(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 1 4 4 0.698 0 1 1 1 355.68057 1419.70046 1419.70005 0.29 0.0001 0/0 0 0 35794128 HCD 30 MS2 38.81861 199.9 21.437 43.2289 10895 10895 10889 QEplus033719.raw F4 242.4 158.7 196 167.6 217.3 217.2 119 3.94 1 FALSE 1.14E-05 8.77E-05 0.868 -250 40223 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSTAQAGTSTAQK [R].tSTAQAGTSTAQk.[R] N-Term(TMT6plex); K13(TMT6plex) 2 A0A1Z3MI45 Ifi204 OS=Mus musculus domesticus OX=10092 GN=Ifi204 PE=3 SV=1 A0A1Z3MI45; P0DOV2 Ifi204 OS=Mus musculus domesticus OX=10092 GN=Ifi204 PE=3 SV=1; Interferon-activable protein 204 OS=Mus musculus OX=10090 GN=Ifi204 PE=1 SV=1 0 3 3 0.6708 0 1 1 1 570.65338 1709.94559 1709.9434 1.28 0.00073 0/0 0 0 15208939 HCD 30 MS2 23.24981 483.6 110 43.2382 10899 10899 10889 QEplus033719.raw F4 501 441.7 502.5 385.3 626 445.1 400 5.68 1 FALSE 1.14E-05 1.28E-11 2.167 -250 40231 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSYESYGNSR [R].dSYESYGNSR.[S] N-Term(TMT6plex) 4 Q9WV02; Q91VM5 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1;RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" A0A2I3BRL8; Q9WV02; Q91VM5; S4R1F6 "Predicted gene 7324 OS=Mus musculus OX=10090 GN=Gm7324 PE=4 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1" 0 2 2 0.7849 0 1 1 1 703.82404 1406.64079 1406.63855 1.59 0.00112 0/0 0 0 11566405 HCD 30 MS2 0 353.7 110 43.2455 10901 10901 10900 QEplus033719.raw F4 350.4 363.6 386.1 285.2 440.5 296.4 23 3.58 2 FALSE 1.14E-05 1.74E-06 1.192 -250 40236 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KEECPAVR [K].kEEcPAVR.[L] N-Term(TMT6plex); K1(TMT6plex); C4(Carbamidomethyl) 13 P09103 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2 P09103; Q3URP6; Q3TWE3; Q3U738; Q3TT76; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; Q3UA23; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 1 2 2 0.608 0 1 1 1 723.90991 1446.81255 1446.81391 -0.94 -0.00068 0/0 0 0 4313313 HCD 30 MS2 0 196.4 110 43.248 10902 10902 10900 QEplus033719.raw F4 197.1 160.1 194.9 171.6 262.2 192.2 420 2.5 1 FALSE 1.14E-05 0.0003519 0.752 -250 40271 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAYRDCLGR [R].gAYRDcLGR.[L] N-Term(TMT6plex); C6(Carbamidomethyl) 31 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q499F9; Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q05CR3; Q9QXS1-9; E9Q9J6; Q9QXS1-5; E9PW24; A0A0R4J221; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; A0A0R4J223; Q8C8S5; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.4676 0 1 1 1 432.89456 1296.66913 1296.66802 0.86 0.00037 0/0 0 0 13218644 HCD 30 MS2 48.50962 802.5 79.77 43.2616 10908 10908 10900 QEplus033719.raw F4 1053.1 636.1 859.7 582 919.1 765 196 2.93 2 FALSE 0.001395 0.01983 0.282 -250 40278 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATLEQTER [R].aTLEQTER.[SA] N-Term(TMT6plex) 8 Q5SX40; P13541; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q9ESW6; B2RWW8; Q5SX40; P13541; G3UW82; B2RWX0; Q3TT35; P13542 "Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.4965 0 1 1 1 588.82538 1176.64348 1176.64218 1.1 0.00065 0/0 0 0 12941636 HCD 30 MS2 30.40194 762.7 110 43.2641 10909 10909 10900 QEplus033719.raw F4 842.3 342.7 618.1 1208.2 444.5 1120.6 314 2.86 3 FALSE 1.14E-05 7.57E-05 0.88 -250 40285 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAEVYTR [K].aAEVYTR.[L] N-Term(TMT6plex) 4 Q3UMU9 Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2 PE=1 SV=1 Q3UMU9-4; Q3UMU9-3; Q3UMU9-2; Q3UMU9 Isoform 4 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Isoform 3 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Isoform 2 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2 PE=1 SV=1 0 2 2 0.2813 0 1 1 1 519.79456 1038.58183 1038.57813 3.57 0.00185 0/0 0 0 12417657 HCD 30 MS2 45.03793 1204.4 110 43.2666 10910 10910 10900 QEplus033719.raw F4 1225.5 1129.8 1565.7 1096.1 1097.7 1111.5 134 1.92 1 FALSE 0.001506 0.02204 0.265 -250 40299 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DEERGQTAVQK [R].dEERGQTAVQk.[L] N-Term(TMT6plex); K11(TMT6plex) 2 B2RXY7 Carbonyl reductase 1 OS=Mus musculus OX=10090 GN=Cbr1 PE=1 SV=1 B2RXY7; A0A338P684 Carbonyl reductase 1 OS=Mus musculus OX=10090 GN=Cbr1 PE=1 SV=1; Carbonyl reductase [NADPH] 1 OS=Mus musculus OX=10090 GN=Cbr1 PE=1 SV=1 1 3 3 0.5299 0 1 1 1 573.6532 1718.94504 1718.94373 0.76 0.00044 0/0 0 0 8105916 HCD 30 MS2 11.00099 415.4 110 43.2763 10913 10913 10911 QEplus033719.raw F4 419.1 362.1 445.9 380.2 435.2 449.6 404 3.85 1 FALSE 1.14E-05 7.79E-10 1.828 -250 40303 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVSDNDIR [R].sVSDNDIR.[K] N-Term(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 0 2 2 0.5 0 1 1 1 567.80164 1134.59599 1134.59523 0.67 0.00038 0/0 0 0 124035304 HCD 30 MS2 2.737771 487.7 10.654 43.2786 10914 10914 10911 QEplus033719.raw F4 521.8 434.5 550.5 424 473.1 522.6 226 2.72 1 FALSE 5.44E-05 0.002354 0.583 -250 40314 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQDQEVEEEK [K].rQDQEVEEEk.[S] N-Term(TMT6plex); K10(TMT6plex) 2 Q8VCN9 Tubulin-specific chaperone C OS=Mus musculus OX=10090 GN=Tbcc PE=1 SV=1 Q8VCN9; A0A0R4J0M1 Tubulin-specific chaperone C OS=Mus musculus OX=10090 GN=Tbcc PE=1 SV=1; Tubulin-folding cofactor C OS=Mus musculus OX=10090 GN=Tbcc PE=1 SV=1 1 3 3 0.7006 0 1 1 1 583.3125 1747.92295 1747.92266 0.16 0.00009 0/0 0 0 7318422 HCD 30 MS2 16.8182 464.4 110 43.2858 10917 10917 10911 QEplus033719.raw F4 588.1 369.5 499.6 367.5 446.9 514.6 328 4.91 1 FALSE 1.14E-05 1.20E-10 1.982 -250 40319 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTTQAAAR [K].lTTQAAAR.[K] N-Term(TMT6plex) 2 E9Q9K5 Triadin OS=Mus musculus OX=10090 GN=Trdn PE=1 SV=1 A0A1W2P7C3; E9Q9K5 Triadin (Fragment) OS=Mus musculus OX=10090 GN=Trdn PE=4 SV=1; Triadin OS=Mus musculus OX=10090 GN=Trdn PE=1 SV=1 0 2 2 0.4291 0 1 1 1 530.82031 1060.63335 1060.63122 2 0.00106 0/0 0 0 3087858.75 HCD 30 MS2 16.18205 618.6 110 43.2883 10918 10918 10911 QEplus033719.raw F4 764.3 292.8 518.9 832.1 500.1 803.5 192 2.54 1 FALSE 0.001074 0.01382 0.348 -250 40329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HCNNGIPENSK [R].hcNNGIPENSk.[V] N-Term(TMT6plex); C2(Carbamidomethyl); K11(TMT6plex) 1 Q8R1F1 Protein Niban 2 OS=Mus musculus OX=10090 GN=Niban2 PE=1 SV=2 Q8R1F1 Protein Niban 2 OS=Mus musculus OX=10090 GN=Niban2 PE=1 SV=2 0 3 3 0.6677 0 1 1 1 576.63397 1727.88736 1727.88992 -1.48 -0.00085 0/0 0 0 2308319.25 HCD 30 MS2 0 255 110 43.2908 10919 10919 10911 QEplus033719.raw F4 312.3 192.8 268.6 209 276 271.2 251 3.22 1 FALSE 1.14E-05 0.0001063 0.852 -250 40336 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KEECPAVR [K].kEEcPAVR.[L] N-Term(TMT6plex); K1(TMT6plex); C4(Carbamidomethyl) 13 P09103 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2 P09103; Q3URP6; Q3TWE3; Q3U738; Q3TT76; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; Q3UA23; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 1 3 3 0.5232 0 1 1 1 482.94302 1446.81452 1446.81391 0.42 0.0002 0/0 0 0 100349312 HCD 30 MS2 61.0826 824.7 11.555 43.2931 10920 10920 10911 QEplus033719.raw F4 860.8 733.6 853.3 641.5 1049.6 809.3 419 2.37 1 FALSE 1.14E-05 0.0001745 0.811 -250 40349 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEGQLSAAER [K].gEGQLSAAER.[A] N-Term(TMT6plex) 15 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q8C153; P58252; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3UZ14; Q3TK17; Q3TLB1; Q3TWX1; Q3TX47; O89069 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 0 2 2 0.5964 0 1 1 1 623.83356 1246.65984 1246.65889 0.76 0.00047 0/0 0 0 33515872 HCD 30 MS2 6.83131 468.3 45.541 43.3027 10923 10923 10922 QEplus033719.raw F4 521.1 333.4 500.6 402.1 491.6 561.3 268 3.89 1 FALSE 1.14E-05 1.84E-08 1.567 -250 40366 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYAPPPR [R].dYAPPPR.[D] N-Term(TMT6plex) 6 Q9WV02; Q91VM5 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1;RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" A2AFI3; Q9WV02-2; A0A2I3BRL8; Q9WV02; Q91VM5; S4R1F6 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; Isoform 2 of RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx; Predicted gene 7324 OS=Mus musculus OX=10090 GN=Gm7324 PE=4 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1" 0 2 2 0.5619 0 1 1 1 522.78778 1044.56828 1044.56756 0.69 0.00036 0/0 0 0 18346402 HCD 30 MS2 3.635349 894.5 110 43.3074 10925 10925 10922 QEplus033719.raw F4 870.5 860.1 902.4 684.3 1197 852.5 177 2.1 2 FALSE 0.001387 0.01963 0.284 -250 40397 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPSYGMSR [K].gPSYGMSR.[E] N-Term(TMT6plex) 2 P37804 Transgelin OS=Mus musculus OX=10090 GN=Tagln PE=1 SV=3 P37804; A0A1L1STN8 Transgelin OS=Mus musculus OX=10090 GN=Tagln PE=1 SV=3; Transgelin (Fragment) OS=Mus musculus OX=10090 GN=Tagln PE=1 SV=1 0 2 2 0.6652 0 1 1 1 542.27686 1083.54643 1083.54545 0.91 0.00049 0/0 0 0 49785052 HCD 30 MS2 4.814298 548.7 22.824 43.3197 10930 10930 10922 QEplus033719.raw F4 632.4 345.8 414.3 276.8 1227.7 395.4 79 2.33 1 FALSE 0.002293 0.04484 0.158 -250 40419 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THEEQLK [K].tHEEQLk.[E] N-Term(TMT6plex); K7(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.6377 0 1 1 1 448.26227 1342.77225 1342.77309 -0.62 -0.00028 0/0 0 0 87938352 HCD 30 MS2 21.03195 579.8 13.419 43.3316 10934 10934 10933 QEplus033719.raw F4 887.3 397 629.7 583 507.7 473.8 332 4.03 2 FALSE 5.44E-05 0.002638 0.571 -250 40424 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPSGDPGKPGER [K].gPSGDPGkPGER.[G] N-Term(TMT6plex); K8(TMT6plex) 4 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 3 3 0.6329 0 1 1 1 537.96716 1611.88694 1611.88549 0.9 0.00048 0/0 0 0 82133200 HCD 30 MS2 7.464422 765.1 23.093 43.3364 10936 10936 10933 QEplus033719.raw F4 710.2 761.2 861.4 497 1025.1 735.6 339 2.37 1 FALSE 5.44E-05 0.002334 0.583 -250 40428 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQAEAQER [R].lQAEAQER.[L] N-Term(TMT6plex) 1 Q9CR59 Growth arrest and DNA damage-inducible proteins-interacting protein 1 OS=Mus musculus OX=10090 GN=Gadd45gip1 PE=1 SV=1 Q9CR59 Growth arrest and DNA damage-inducible proteins-interacting protein 1 OS=Mus musculus OX=10090 GN=Gadd45gip1 PE=1 SV=1 0 2 2 0.3119 0 1 1 1 587.32556 1173.64385 1173.64252 1.13 0.00066 0/0 0 0 10848234 HCD 30 MS2 17.71227 657 110 43.3389 10937 10937 10933 QEplus033719.raw F4 692.3 513.7 684.2 705 581 766.1 282 2.95 1 FALSE 1.14E-05 8.64E-05 0.869 -250 40437 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPQEDLDR [R].gPQEDLDR.[T] N-Term(TMT6plex) 2 Q8R3F5 "Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Mus musculus OX=10090 GN=Mcat PE=1 SV=3" Q8R3F5; A0A2R8VHT7 "Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Mus musculus OX=10090 GN=Mcat PE=1 SV=3; Malonyl-CoA-acyl carrier protein transacylase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Mcat PE=1 SV=1" 0 2 2 0.5631 0 1 1 1 579.79968 1158.59209 1158.59523 -2.71 -0.00157 0/0 0 0 5022518 HCD 30 MS2 16.05685 508.4 110 43.3414 10938 10938 10933 QEplus033719.raw F4 517.2 428.8 566.4 495.2 474.2 568.5 98 2.93 1 FALSE 1.14E-05 0.0002682 0.775 -250 40451 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASCGTEGFR [R].aScGTEGFR.[N] N-Term(TMT6plex); C3(Carbamidomethyl) 3 Q9DCA2 "28S ribosomal protein S11, mitochondrial OS=Mus musculus OX=10090 GN=Mrps11 PE=1 SV=2" Q9DCA2; Q3TLY7; Q3U8Y1 "28S ribosomal protein S11, mitochondrial OS=Mus musculus OX=10090 GN=Mrps11 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mrps11 PE=2 SV=1; 28S ribosomal protein S11, mitochondrial OS=Mus musculus OX=10090 GN=Mrps11 PE=1 SV=1" 0 2 2 0.7143 0 1 1 1 607.2962 1213.58513 1213.58329 1.52 0.00092 0/0 0 0 2356107.5 HCD 30 MS2 34.25709 339.1 110 43.3464 10940 10940 10933 QEplus033719.raw F4 308.2 334.6 367 303.8 382.2 338.9 44 2.73 1 FALSE 0.0002419 0.004892 0.504 -250 40467 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPSGDPGKPGER [K].gPSGDPGkPGER.[G] N-Term(TMT6plex); K8(TMT6plex) 4 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.615 0 1 1 1 806.44739 1611.8875 1611.88549 1.25 0.001 0/0 0 0 4141439.5 HCD 30 MS2 11.52827 141 110 43.3514 10942 10942 10933 QEplus033719.raw F4 133.4 132.2 156.5 100.7 177.1 146 339 2.26 1 FALSE 1.14E-05 0.0007197 0.691 -250 40474 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAIEESQAER [R].tAIEESQAER.[K] N-Term(TMT6plex) 4 Q3V1T4 Prolyl 3-hydroxylase 1 OS=Mus musculus OX=10090 GN=P3h1 PE=1 SV=2 Q3V1T4; A2A7Q5; A6PW84; Q3V1T4-3 Prolyl 3-hydroxylase 1 OS=Mus musculus OX=10090 GN=P3h1 PE=1 SV=2; Procollagen-proline 3-dioxygenase OS=Mus musculus OX=10090 GN=P3h1 PE=1 SV=1; Procollagen-proline 3-dioxygenase OS=Mus musculus OX=10090 GN=P3h1 PE=1 SV=1; Isoform 3 of Prolyl 3-hydroxylase 1 OS=Mus musculus OX=10090 GN=P3h1 0 2 2 0.7086 0 1 1 1 681.85693 1362.70659 1362.70624 0.26 0.00018 0/0 0 0 3877010.25 HCD 30 MS2 0 203.3 110 43.3539 10943 10943 10933 QEplus033719.raw F4 202.2 173.1 211.7 179.6 243.5 209.8 212 4.05 1 FALSE 1.14E-05 8.70E-09 1.629 -250 40482 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETPEGQEAAAAER [R].eTPEGQEAAAAER.[N] N-Term(TMT6plex) 1 Q7TPE5 Probable RNA polymerase II nuclear localization protein SLC7A6OS OS=Mus musculus OX=10090 GN=Slc7a6os PE=1 SV=1 Q7TPE5 Probable RNA polymerase II nuclear localization protein SLC7A6OS OS=Mus musculus OX=10090 GN=Slc7a6os PE=1 SV=1 0 2 2 0.6759 0 1 1 1 794.39508 1587.78288 1587.78119 1.06 0.00084 0/0 0 0 1511535.125 HCD 30 MS2 0 86 110 43.3613 10945 10945 10944 QEplus033719.raw F4 85.1 75 97.4 60.6 104.6 93.2 135 3.95 1 FALSE 1.14E-05 3.53E-12 2.273 -250 40488 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPPPASAVQR [R].sPPPASAVQR.[V] N-Term(TMT6plex) 1 Q3U425 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pom121 PE=1 SV=1 Q3U425 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pom121 PE=1 SV=1 0 2 2 0.366 0 1 1 1 619.85339 1238.69951 1238.70545 -4.8 -0.00297 0/0 0 0 894485.75 HCD 30 MS2 82.92352 301.1 110 43.3638 10946 10946 10944 QEplus033719.raw F4 332.3 217.5 339.8 262.6 335.6 318.6 321 2.35 1 FALSE 0.001576 0.02406 0.25 -250 40498 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSMEEQR [R].vSMEEQR.[Q] N-Term(TMT6plex) 7 O35226; O35226-2 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4 PE=1 SV=1;Isoform Rpn10B of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4 O35226-3; O35226; F7AI87; O35226-4; O35226-2; O35226-5; Q9CY29 Isoform Rpn10C of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4; 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 4 (Fragment) OS=Mus musculus OX=10090 GN=Psmd4 PE=1 SV=1; Isoform Rpn10D of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4; Isoform Rpn10B of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4; Isoform Rpn10E of 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4; 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4 PE=2 SV=1 0 2 2 0.1903 0 1 1 1 554.28705 1107.56682 1107.56657 0.22 0.00012 0/0 0 0 86436760 HCD 30 MS2 23.16516 496.7 13.665 43.3661 10947 10947 10944 QEplus033719.raw F4 497.9 383.4 561.4 454.5 465.9 616.9 168 2.68 2 FALSE 0.0003496 0.006919 0.46 -250 40505 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLGVSGR [R].nLGVSGR.[I] N-Term(TMT6plex) 1 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 2 2 0.3772 0 1 1 1 466.28018 931.55309 931.55225 0.9 0.00042 0/0 0 0 26347214 HCD 30 MS2 12.13401 876.2 58.696 43.3683 10948 10948 10944 QEplus033719.raw F4 947.3 674.4 946.1 766.6 949.9 972.7 94 2.28 1 FALSE 0.0006574 0.01 0.404 -250 40521 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGPVAVR [R].dGPVAVR.[E] N-Term(TMT6plex) 5 B9EJ54 Nucleoporin 205 OS=Mus musculus OX=10090 GN=Nup205 PE=1 SV=1 B9EJ54; Q6PDG0; A0A0J9YUD5; Q6ZQG1; Q6P9L5 Nucleoporin 205 OS=Mus musculus OX=10090 GN=Nup205 PE=1 SV=1; Nup205 protein (Fragment) OS=Mus musculus OX=10090 GN=Nup205 PE=2 SV=1; Nucleoporin 205 OS=Mus musculus OX=10090 GN=Nup205 PE=1 SV=1; MKIAA0225 protein (Fragment) OS=Mus musculus OX=10090 GN=Nup205 PE=2 SV=1; Nup205 protein (Fragment) OS=Mus musculus OX=10090 GN=Nup205 PE=2 SV=1 0 2 2 0.4352 0 1 1 1 471.78256 942.55785 942.557 0.9 0.00043 0/0 0 0 15033266 HCD 30 MS2 8.286632 725 110 43.3731 10950 10950 10944 QEplus033719.raw F4 796.5 615.9 751.6 524.4 894.7 766.7 82 2.16 1 FALSE 0.001108 0.01452 0.339 -250 40526 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNSGEPGAPGNK [K].gNSGEPGAPGNk.[G] N-Term(TMT6plex); K12(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 3 3 0.627 0 1 1 1 514.9483 1542.83036 1542.82764 1.76 0.00091 0/0 0 0 4561162 HCD 30 MS2 53.06458 601.8 110 43.3756 10951 10951 10944 QEplus033719.raw F4 872.6 457.3 634.3 396.1 590.5 660.1 345 4.37 1 FALSE 1.14E-05 4.47E-08 1.494 -250 40534 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELQQDPEER [K].eLQQDPEER.[L] N-Term(TMT6plex) 6 E9PX53 Serine/threonine-protein phosphatase 4 regulatory subunit 1 OS=Mus musculus OX=10090 GN=Ppp4r1 PE=1 SV=1 Q8K2V1-2; F6V294; Q3TLM9; E9PX53; Q8K2V1; E9QPR5 Isoform 2 of Serine/threonine-protein phosphatase 4 regulatory subunit 1 OS=Mus musculus OX=10090 GN=Ppp4r1; Serine/threonine-protein phosphatase 4 regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Ppp4r1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppp4r1 PE=2 SV=1; Serine/threonine-protein phosphatase 4 regulatory subunit 1 OS=Mus musculus OX=10090 GN=Ppp4r1 PE=1 SV=1; Serine/threonine-protein phosphatase 4 regulatory subunit 1 OS=Mus musculus OX=10090 GN=Ppp4r1 PE=1 SV=2; Serine/threonine-protein phosphatase 4 regulatory subunit 1 OS=Mus musculus OX=10090 GN=Ppp4r1 PE=1 SV=1 0 2 2 0.5661 0 1 1 1 686.84821 1372.68913 1372.69059 -1.06 -0.00073 0/0 0 0 4031919 HCD 30 MS2 26.64948 259.3 110 43.3781 10952 10952 10944 QEplus033719.raw F4 263.3 228.1 279.7 174.8 365.5 244.5 114 3.48 1 FALSE 1.14E-05 1.17E-05 1.035 -250 40545 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGEGCVITR [K].sGEGcVITR.[EG] N-Term(TMT6plex); C5(Carbamidomethyl) 4 Q78P93 Ceramidase OS=Mus musculus OX=10090 GN=Asah1 PE=1 SV=1 Q78P93; Q3U646; Q3TWT5; Q3U8A7 Ceramidase OS=Mus musculus OX=10090 GN=Asah1 PE=1 SV=1; Ceramidase OS=Mus musculus OX=10090 GN=Asah1 PE=2 SV=1; Ceramidase OS=Mus musculus OX=10090 GN=Asah1 PE=2 SV=1; Ceramidase OS=Mus musculus OX=10090 GN=Asah1 PE=2 SV=1 0 2 2 0.5963 0 1 1 1 604.31909 1207.63091 1207.63024 0.55 0.00033 0/0 0 0 5295466.5 HCD 30 MS2 0 423.8 110 43.3831 10954 10954 10944 QEplus033719.raw F4 419.9 381.9 467 358.8 484.6 430.7 219 2.7 1 FALSE 1.14E-05 1.15E-05 1.036 -250 40558 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGQERDAPIVNR [R].dGQERDAPIVNR.[V] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 1 3 3 0.5757 0 1 1 1 533.62042 1598.84671 1598.8448 1.2 0.00064 0/0 0 0 7183420 HCD 30 MS2 12.3076 309.1 110 43.3929 10957 10957 10955 QEplus033719.raw F4 315.3 283.5 356.3 284 311.7 303.6 301 3.7 3 FALSE 1.14E-05 1.94E-09 1.752 -250 40564 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGRPTASK [K].vGRPTASk.[K] N-Term(TMT6plex); K8(TMT6plex) 2 A0A087WRY3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Mus musculus OX=10090 GN=Nucks1 PE=1 SV=1 A0A087WRY3; Q80XU3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Mus musculus OX=10090 GN=Nucks1 PE=1 SV=1; Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Mus musculus OX=10090 GN=Nucks1 PE=1 SV=1 0 3 3 0.4398 0 1 1 1 425.27124 1273.79917 1273.79924 -0.06 -0.00002 0/0 0 0 40170064 HCD 30 MS2 60.77522 686 18.994 43.3952 10958 10958 10955 QEplus033719.raw F4 688.2 530 754.6 667.4 805 670.8 566 1.91 1 FALSE 0.008678 0.1537 -0.091 -250 40572 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHPDAWTR [K].eHPDAWTR.[V] N-Term(TMT6plex) 1 Q6P5F9 Exportin-1 OS=Mus musculus OX=10090 GN=Xpo1 PE=1 SV=1 Q6P5F9 Exportin-1 OS=Mus musculus OX=10090 GN=Xpo1 PE=1 SV=1 0 3 3 0.648 0 1 1 1 414.21405 1240.6276 1240.6272 0.32 0.00013 0/0 0 0 31004306 HCD 30 MS2 42.35185 360.6 26.766 43.3974 10959 10959 10955 QEplus033719.raw F4 478.1 260.2 373.7 370.5 323.5 357.6 130 2.5 1 FALSE 0.001125 0.0149 0.334 -250 40580 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARLEETDRK [K].aRLEETDRk.[T] N-Term(TMT6plex); K9(TMT6plex) 7 Q8BML9 Glutamine--tRNA ligase OS=Mus musculus OX=10090 GN=Qars1 PE=1 SV=1 Q8R1V9; D3Z158; Q3TIN2; A0A140LHB3; A0A140LIS6; A0A140LHZ5; Q8BML9 Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=1 SV=2; Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=2 SV=1; Glutaminyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutaminyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutamine--tRNA ligase OS=Mus musculus OX=10090 GN=Qars1 PE=1 SV=1 2 4 4 0.3141 0 1 1 1 394.73569 1575.92092 1575.92188 -0.61 -0.00024 0/0 0 0 19084018 HCD 30 MS2 37.53598 475.9 45.886 43.3997 10960 10960 10955 QEplus033719.raw F4 443.2 359.7 521.4 418.9 547.8 564.1 506 1.91 1 FALSE 0.004741 0.0833 0.053 -250 40595 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLAAEEEQR [R].qLAAEEEQR.[R] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.6404 0 1 1 1 651.84729 1302.6873 1302.68511 1.68 0.0011 0/0 0 0 5216784 HCD 30 MS2 19.90813 440.2 110 43.4045 10962 10962 10955 QEplus033719.raw F4 495.5 377.6 474.2 383.8 460.2 449.6 239 3.42 2 FALSE 1.14E-05 2.05E-06 1.178 -250 40603 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHPDAWTR [K].eHPDAWTR.[V] N-Term(TMT6plex) 1 Q6P5F9 Exportin-1 OS=Mus musculus OX=10090 GN=Xpo1 PE=1 SV=1 Q6P5F9 Exportin-1 OS=Mus musculus OX=10090 GN=Xpo1 PE=1 SV=1 0 2 2 0.56 0 1 1 1 620.81787 1240.62847 1240.6272 1.02 0.00063 0/0 0 0 3318226.25 HCD 30 MS2 27.61445 315.1 110 43.407 10963 10963 10955 QEplus033719.raw F4 378.6 236.8 335.3 273.9 344.5 321.2 118 2.5 1 FALSE 0.0003496 0.006922 0.46 -250 40617 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVLENNSGR [R].tVLENNSGR.[S] N-Term(TMT6plex) 1 E9PZM4 Chromodomain-helicase-DNA-binding protein 2 OS=Mus musculus OX=10090 GN=Chd2 PE=1 SV=1 E9PZM4 Chromodomain-helicase-DNA-binding protein 2 OS=Mus musculus OX=10090 GN=Chd2 PE=1 SV=1 0 2 2 0.4329 0 1 1 1 609.83331 1218.65935 1218.66398 -3.8 -0.00232 0/0 0 0 2052142.625 HCD 30 MS2 0 320.8 110 43.412 10965 10965 10955 QEplus033719.raw F4 418.9 286.6 332 291.5 277.7 317.8 271 2.31 1 FALSE 5.44E-05 0.002614 0.572 -250 40626 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGIPPDQQR [K].eGIPPDQQR.[LV] N-Term(TMT6plex) 18 P62984; P62983 Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2;Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2 E9Q5F6; P62984; Q922Z8; Q922B0; Q3TH47; Q5SX22; E9Q4P0; P62983; Q78XY9; E9Q9J0; Q8R0Z9; B0LAC2; Q8C2K3; Q8VC46; A5JUZ1; A0A0A6YW67; E9QNP0; P0CG50 Polyubiquitin-C (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=1; Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Polyubiquitin-B (Fragment) OS=Mus musculus OX=10090 GN=Ubb PE=4 SV=2; KxDL motif-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2; Ubiquitin B OS=Mus musculus OX=10090 GN=Ubb PE=2 SV=1; 60S ribosomal protein L40 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=3 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiquitin A-52 residue ribosomal protein fusion product 1 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubb-ps PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiqutin subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Predicted pseudogene 8797 OS=Mus musculus OX=10090 GN=Gm8797 PE=4 SV=1; 60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Polyubiquitin-C OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=2 0 2 2 0.6712 0 1 1 1 634.84375 1268.68022 1268.67963 0.47 0.0003 0/0 0 0 59554180 HCD 30 MS2 2.746333 484.6 38.997 43.4193 10967 10967 10966 QEplus033719.raw F4 476.8 400.1 494 380.3 580.2 576.3 289 2.92 2 FALSE 2.26E-05 0.0009784 0.664 -250 40636 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVHEEEIR [K].kVHEEEIR.[E] N-Term(TMT6plex); K1(TMT6plex) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 1 4 4 0.0932 0 1 1 1 375.2261 1497.88259 1497.87895 2.43 0.00091 0/0 0 0 76379696 HCD 30 MS2 5.12503 268.4 11.784 43.424 10969 10969 10966 QEplus033719.raw F4 336.6 99.7 214.9 457.4 114.1 387.7 353 3.97 1 FALSE 1.14E-05 3.51E-06 1.134 -250 40656 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAHPSGGADDVAK [K].gAHPSGGADDVAk.[K] N-Term(TMT6plex); K13(TMT6plex) 1 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 0 3 3 0.7638 0 1 1 1 547.30011 1639.88578 1639.8804 3.28 0.00179 0/0 0 0 7289650.5 HCD 30 MS2 28.92587 354.9 110 43.4362 10974 10974 10966 QEplus033719.raw F4 348 273.9 237.4 354.4 704.5 211 359 6.14 1 FALSE 1.14E-05 6.31E-16 3.115 -250 40668 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARLEETDRK [K].aRLEETDRk.[T] N-Term(TMT6plex); K9(TMT6plex) 7 Q8BML9 Glutamine--tRNA ligase OS=Mus musculus OX=10090 GN=Qars1 PE=1 SV=1 Q8R1V9; D3Z158; Q3TIN2; A0A140LHB3; A0A140LIS6; A0A140LHZ5; Q8BML9 Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=1 SV=2; Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=2 SV=1; Glutaminyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutaminyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutamine--tRNA ligase OS=Mus musculus OX=10090 GN=Qars1 PE=1 SV=1 2 3 3 0.3176 0 1 1 1 525.97925 1575.92319 1575.92188 0.83 0.00044 0/0 0 0 6046881.5 HCD 30 MS2 22.9905 454.1 110 43.4412 10976 10976 10966 QEplus033719.raw F4 443.9 327.4 467.7 429.9 496.1 559.7 510 2.33 1 FALSE 0.002913 0.05727 0.121 -250 40674 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YPEGSPEER [K].yPEGSPEER.[E] N-Term(TMT6plex) 1 P21981 Protein-glutamine gamma-glutamyltransferase 2 OS=Mus musculus OX=10090 GN=Tgm2 PE=1 SV=4 P21981 Protein-glutamine gamma-glutamyltransferase 2 OS=Mus musculus OX=10090 GN=Tgm2 PE=1 SV=4 0 2 2 0.6148 0 1 1 1 646.82062 1292.63396 1292.63201 1.51 0.00097 0/0 0 0 6557590 HCD 30 MS2 20.11338 355.9 110 43.451 10979 10979 10977 QEplus033719.raw F4 442.8 200.3 339.1 498.4 218.3 436.2 127 2.57 1 FALSE 0.000262 0.005264 0.495 -250 40687 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYIETDPANRDR [K].rYIETDPANRDR.[R] N-Term(TMT6plex) 6 P13020-2; Q3SX14 Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn;TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin Q3UCW8; Q3U9Q8; P13020-2; Q3TGJ9; P13020; Q3SX14 Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Gelsolin OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=3; TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin 2 4 4 0.5728 0 1 1 1 434.48267 1734.90883 1734.90846 0.22 0.00009 0/0 0 0 18613888 HCD 30 MS2 44.21378 472.8 55.543 43.4555 10981 10981 10977 QEplus033719.raw F4 456.7 367 639.9 457.2 272.3 643.5 304 3.09 2 TRUE 0.0006294 0.009566 0.412 -250 40701 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTAEEEDEADPK [K].rTAEEEDEADPk.[R] N-Term(TMT6plex); K12(TMT6plex) 2 Q66JR8 Ptms protein OS=Mus musculus OX=10090 GN=Ptms PE=2 SV=1 Q66JR8; Q9D0J8 Ptms protein OS=Mus musculus OX=10090 GN=Ptms PE=2 SV=1; Parathymosin OS=Mus musculus OX=10090 GN=Ptms PE=1 SV=3 1 3 3 0.7064 0 1 1 1 616.65143 1847.93973 1847.93871 0.55 0.00034 0/0 0 0 16279032 HCD 30 MS2 7.217517 590.2 99.026 43.4602 10983 10983 10977 QEplus033719.raw F4 689.6 439.2 600.5 358.5 877.4 576.1 245 5.28 1 FALSE 1.14E-05 4.43E-15 2.824 -250 40708 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPAGPQGPRGDKGETGEQGDR [R].gPAGPQGPRGDkGETGEQGDR.[G] N-Term(TMT6plex); K12(TMT6plex) 3 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087; Q99LL6 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4; Col1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1 2 4 4 0.4364 0 1 1 1 631.82684 2524.28554 2524.29045 -1.94 -0.00123 0/0 0 0 4510830.5 HCD 30 MS2 10.90588 278.7 110 43.4627 10984 10984 10977 QEplus033719.raw F4 319.9 267.8 337.7 218.8 324.3 203.6 329 2.36 1 FALSE 0.001047 0.01362 0.35 -250 40715 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LREQEMER [R].lREQEMER.[L] N-Term(TMT6plex) 10 F6RYD0; Q8K1N2 Pleckstrin homology-like domain family B member 1 (Fragment) OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1;Pleckstrin homology-like domain family B member 2 OS=Mus musculus OX=10090 GN=Phldb2 PE=1 SV=2 Q6PDH0-2; F6RYD0; Q8K1N2; E9PWB1; Q8K1N2-2; F6RUK9; D3Z0X5; D3Z4N0; D3Z069; Q6PDH0 Isoform 2 of Pleckstrin homology-like domain family B member 1 OS=Mus musculus OX=10090 GN=Phldb1; Pleckstrin homology-like domain family B member 1 (Fragment) OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1; Pleckstrin homology-like domain family B member 2 OS=Mus musculus OX=10090 GN=Phldb2 PE=1 SV=2; Pleckstrin homology-like domain family B member 1 OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1; Isoform 2 of Pleckstrin homology-like domain family B member 2 OS=Mus musculus OX=10090 GN=Phldb2; Pleckstrin homology-like domain family B member 1 (Fragment) OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1; Pleckstrin homology-like domain family B member 1 OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1; Pleckstrin homology-like domain family B member 1 OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1; Pleckstrin homology-like domain family B member 2 (Fragment) OS=Mus musculus OX=10090 GN=Phldb2 PE=1 SV=1; Pleckstrin homology-like domain family B member 1 OS=Mus musculus OX=10090 GN=Phldb1 PE=1 SV=1 1 3 3 0.5746 0 1 1 1 440.57001 1319.69547 1319.6939 1.19 0.00052 0/0 0 0 8023854 HCD 30 MS2 43.22506 706.7 110 43.4652 10985 10985 10977 QEplus033719.raw F4 774.8 578.7 745.4 547.4 811.6 782.2 251 3.62 2 FALSE 1.14E-05 0.0005939 0.708 -250 40724 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTPNAGSDR [K].lTPNAGSDR.[S] N-Term(TMT6plex) 2 Q9ERU9 E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 Q8BQK6; Q9ERU9 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ranbp2 PE=2 SV=2; E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 0 2 2 0.5246 0 1 1 1 580.31879 1159.6303 1159.62687 2.96 0.00172 0/0 0 0 7644456.5 HCD 30 MS2 23.37755 601 110 43.4677 10986 10986 10977 QEplus033719.raw F4 582.6 568.1 657.2 460.4 682.3 655.7 222 3.05 1 FALSE 1.14E-05 0.0009224 0.669 -250 40746 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHCPAGQPVK [R].eHcPAGQPVk.[V] N-Term(TMT6plex); C3(Carbamidomethyl); K10(TMT6plex) 3 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 Q99PV0; Q3UNG1; B7ZC27 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Prpf8 PE=2 SV=1; Pre-mRNA-processing-splicing factor 8 (Fragment) OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=1 0 3 3 0.5252 0 1 1 1 527.62585 1580.86301 1580.86192 0.69 0.00036 0/0 0 0 12335079 HCD 30 MS2 34.05315 688.7 110 43.48 10990 10990 10988 QEplus033719.raw F4 1004.6 522.1 673.6 441 700.2 791 402 4.36 1 FALSE 1.14E-05 1.58E-09 1.769 -250 40762 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANDTIVR [K].aNDTIVR.[S] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.0688 0 1 1 1 509.29852 1017.58977 1017.58902 0.73 0.00037 0/0 0 0 33831868 HCD 30 MS2 19.07756 634.7 36.789 43.4845 10992 10992 10988 QEplus033719.raw F4 667.6 367.3 583.2 736.7 514.1 939.4 182 2.18 2 FALSE 0.002148 0.04067 0.172 -250 40769 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRQNISPDK [K].gRQNISPDk.[I] N-Term(TMT6plex); K9(TMT6plex) 3 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q80U36; Q9JHU4; Q8C6T5 MKIAA0325 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1 1 3 3 0.4468 0 1 1 1 491.62479 1472.85981 1472.85855 0.85 0.00042 0/0 0 0 33009004 HCD 30 MS2 10.86805 861.2 55.079 43.4868 10993 10993 10988 QEplus033719.raw F4 927.7 556.7 846.6 725.5 1188.3 922.1 387 3.85 1 FALSE 1.14E-05 3.76E-07 1.318 -250 40776 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYNSHSLR [R].vYNSHSLR.[A] N-Term(TMT6plex) 7 B9EK95 Myof protein OS=Mus musculus OX=10090 GN=Myof PE=2 SV=1 Q69ZN7-2; A0A286YDF5; B9EK95; Q69ZN7-4; E9Q390; Q69ZN7-3; Q69ZN7 Isoform 2 of Myoferlin OS=Mus musculus OX=10090 GN=Myof; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=1; Myof protein OS=Mus musculus OX=10090 GN=Myof PE=2 SV=1; Isoform 4 of Myoferlin OS=Mus musculus OX=10090 GN=Myof; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=2; Isoform 3 of Myoferlin OS=Mus musculus OX=10090 GN=Myof; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=2 0 3 3 0.531 0 1 1 1 402.22614 1204.66385 1204.66359 0.22 0.00009 0/0 0 0 19487216 HCD 30 MS2 35.14937 426.8 51.508 43.489 10994 10994 10988 QEplus033719.raw F4 445.8 374.8 448.3 346.7 531.4 413.9 348 3.71 1 FALSE 1.14E-05 0.0009277 0.669 -250 40785 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APSTSTPEPTR [K].aPSTSTPEPTR.[K] N-Term(TMT6plex) 12 J3QNM3 Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1 J3QNM3; Q03173-3; A0A0A6YW06; Q03173-4; Q03173; Q03173-6; A0A0A6YXC8; Q03173-2; E9QKQ9; Q03173-5; E9QLZ9; E9QKR1 Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Isoform 2 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Isoform 3 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=2; Isoform 6 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Isoform 1 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Isoform 4 of Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=1; Protein enabled homolog OS=Mus musculus OX=10090 GN=Enah PE=1 SV=2 0 2 2 0.3899 0 1 1 1 686.86969 1372.7321 1372.72697 3.74 0.00256 0/0 0 0 8494184 HCD 30 MS2 19.86305 388.1 110 43.4915 10995 10995 10988 QEplus033719.raw F4 458.2 279.5 448.9 315.1 434.7 391.9 236 2.18 1 FALSE 5.44E-05 0.002567 0.574 -250 40832 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGSGVER [R].iGSGVER.[M] N-Term(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; Q9D0E1-2; Q3TQ66; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 2 2 0.1364 0 1 1 1 473.77917 946.55107 946.55191 -0.89 -0.00042 0/0 0 0 43471312 HCD 30 MS2 26.79456 739 22.699 43.5111 11002 11002 10999 QEplus033719.raw F4 745.5 692.3 775.3 560.6 884.6 775.7 164 2.42 1 FALSE 0.00192 0.03298 0.202 -250 40851 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQVEVNVR [K].rQVEVNVR.[N] N-Term(TMT6plex) 3 Q99LI8 Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=2 Q99LI8; Q3UMA3; Q3TLL4 Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=2; Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=1; Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=2 SV=1 1 3 3 0.2778 0 1 1 1 410.24921 1228.73307 1228.73233 0.6 0.00024 0/0 0 0 22199468 HCD 30 MS2 28.22736 394.4 52.69 43.5156 11004 11004 10999 QEplus033719.raw F4 435.1 288.2 428.1 375.4 386.6 453.2 315 3.78 1 FALSE 1.14E-05 1.06E-07 1.422 -250 40871 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGVMGPPGNR [R].aGVmGPPGNR.[G] N-Term(TMT6plex); M4(Oxidation) 4 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.5467 0 1 1 1 600.82202 1200.63677 1200.63566 0.92 0.00055 0/0 0 0 10522198 HCD 30 MS2 6.150895 749.9 110 43.5204 11006 11006 10999 QEplus033719.raw F4 861.4 430.1 728.4 1109.5 690.2 679.9 135 2.14 1 FALSE 0.007672 0.1256 -0.052 -250 40879 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENRDQSAQCTVTK [K].eNRDQSAQcTVTk.[T] N-Term(TMT6plex); C9(Carbamidomethyl); K13(TMT6plex) 6 Q4JG03 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1 Q7TMY8-4; Q4JG03; Q7TMY8-3; Q7TMY8; Q7TMY8-2; A2AFQ0 Isoform 4 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; Isoform 3 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=5; Isoform 2 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=1 1 3 3 0.748 0 1 1 1 665.68274 1995.03366 1995.03296 0.35 0.00024 0/0 0 0 4125746.5 HCD 30 MS2 0 230.6 110 43.5229 11007 11007 10999 QEplus033719.raw F4 249.7 194.4 250.1 171.9 284.3 233.5 297 3.69 1 FALSE 1.14E-05 2.59E-12 2.298 -250 40906 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVHEEEIR [K].kVHEEEIR.[E] N-Term(TMT6plex); K1(TMT6plex) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 1 2 2 0.2308 0 1 1 1 749.44397 1497.88066 1497.87895 1.14 0.00086 0/0 0 0 26382664 HCD 30 MS2 57.60474 502.5 66.898 43.5376 11012 11012 11010 QEplus033719.raw F4 575.2 257.9 468.4 697.8 344.4 671.6 373 2.99 1 FALSE 5.44E-05 0.00204 0.597 -250 40912 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEVVLDR [R].hEVVLDR.[H] N-Term(TMT6plex) 6 G3X8Y1; Q9ERP3 Tripartite motif-containing 55 OS=Mus musculus OX=10090 GN=Trim55 PE=1 SV=1;Tripartite motif-containing protein 54 OS=Mus musculus OX=10090 GN=Trim54 PE=1 SV=1 Q8C6Y1; G3X8Y1; Q3KNI7; Q9ERP3; Q3KNI8; E9QAT9 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Trim55 PE=2 SV=1; Tripartite motif-containing 55 OS=Mus musculus OX=10090 GN=Trim55 PE=1 SV=1; Trim54 protein OS=Mus musculus OX=10090 GN=Trim54 PE=2 SV=1; Tripartite motif-containing protein 54 OS=Mus musculus OX=10090 GN=Trim54 PE=1 SV=1; Trim54 protein OS=Mus musculus OX=10090 GN=Trim54 PE=2 SV=1; Tripartite motif-containing protein 54 OS=Mus musculus OX=10090 GN=Trim54 PE=1 SV=1 0 3 3 0.6327 0 1 1 1 366.21567 1096.63245 1096.63122 1.12 0.00041 0/0 0 0 16663916 HCD 30 MS2 58.36041 374.1 66.804 43.5398 11013 11013 11010 QEplus033719.raw F4 501.5 205.4 378.6 313.5 328.1 517.8 151 3.92 2 FALSE 1.14E-05 0.0007996 0.682 -250 40921 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGSISNYR [R].sGSISNYR.[S] N-Term(TMT6plex) 3 Q3TUQ7 Acetyl-CoA carboxylase kinase OS=Mus musculus OX=10090 GN=Prkaa1 PE=1 SV=1 Q3TUQ7; Q8BUX6; Q5EG47 Acetyl-CoA carboxylase kinase OS=Mus musculus OX=10090 GN=Prkaa1 PE=1 SV=1; AdenylateSensor domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Prkaa1 PE=2 SV=1; 5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Mus musculus OX=10090 GN=Prkaa1 PE=1 SV=2 0 2 2 0.5983 0 1 1 1 556.79797 1112.58867 1112.58975 -0.97 -0.00054 0/0 0 0 13600503 HCD 30 MS2 29.03508 843.6 110 43.5423 11014 11014 11010 QEplus033719.raw F4 934.6 777.5 944.8 711.3 798.5 895.2 123 2.34 1 FALSE 3.35E-05 0.001362 0.634 -250 40925 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGHDPYR [R].lGHDPYR.[L] N-Term(TMT6plex) 7 H9KV00 Protein SON OS=Mus musculus OX=10090 GN=Son PE=1 SV=1 Q9QX47-3; Q9QX47-4; H9KV15; Q9QX47; H9KV01; Q9QX47-2; H9KV00 Isoform 3 of Protein SON OS=Mus musculus OX=10090 GN=Son; Isoform 4 of Protein SON OS=Mus musculus OX=10090 GN=Son; Protein SON OS=Mus musculus OX=10090 GN=Son PE=1 SV=1; Protein SON OS=Mus musculus OX=10090 GN=Son PE=1 SV=2; Protein SON OS=Mus musculus OX=10090 GN=Son PE=1 SV=1; Isoform 2 of Protein SON OS=Mus musculus OX=10090 GN=Son; Protein SON OS=Mus musculus OX=10090 GN=Son PE=1 SV=1 0 3 3 0.1324 0 1 1 1 362.86819 1086.59003 1086.58936 0.62 0.00022 0/0 0 0 12732054 HCD 30 MS2 19.84541 371.9 85.834 43.5446 11015 11015 11010 QEplus033719.raw F4 444.5 288.7 419 295.3 393.9 390 127 3.55 1 FALSE 0.0001401 0.003225 0.551 -250 40935 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGAPGPAGAR [R].vGAPGPAGAR.[G] N-Term(TMT6plex) 3 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.4459 0 1 1 1 541.32013 1081.63298 1081.63156 1.32 0.00071 0/0 0 0 8762894 HCD 30 MS2 6.576362 771.4 110 43.5471 11016 11016 11010 QEplus033719.raw F4 894.1 778.1 897.6 427.3 902.4 728.7 118 2.96 1 FALSE 1.14E-05 0.0002517 0.78 -250 40952 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGQERDAPIVNR [R].dGQERDAPIVNR.[V] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 1 2 2 0.5693 0 1 1 1 799.92609 1598.8449 1598.8448 0.06 0.00005 0/0 0 0 5784144 HCD 30 MS2 0 72.9 110 43.5521 11018 11018 11010 QEplus033719.raw F4 78.6 50.7 87.3 80.3 58.8 81.9 277 2.74 3 FALSE 1.14E-05 5.75E-09 1.663 -250 40963 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGSLNQSSGYR [R].dGSLNQSSGYR.[Y] N-Term(TMT6plex) 5 P39688 Tyrosine-protein kinase Fyn OS=Mus musculus OX=10090 GN=Fyn PE=1 SV=4 D3YZA2; P39688-2; D3YVZ0; P39688; D3YZ57 Tyrosine-protein kinase Fyn (Fragment) OS=Mus musculus OX=10090 GN=Fyn PE=1 SV=1; Isoform 2 of Tyrosine-protein kinase Fyn OS=Mus musculus OX=10090 GN=Fyn; Tyrosine-protein kinase Fyn (Fragment) OS=Mus musculus OX=10090 GN=Fyn PE=1 SV=1; Tyrosine-protein kinase Fyn OS=Mus musculus OX=10090 GN=Fyn PE=1 SV=4; Tyrosine-protein kinase OS=Mus musculus OX=10090 GN=Fyn PE=1 SV=1 0 2 2 0.7135 0 1 1 1 706.85321 1412.69914 1412.69674 1.7 0.0012 0/0 0 0 4034245.75 HCD 30 MS2 0 177.2 110 43.5571 11020 11020 11010 QEplus033719.raw F4 196.7 130.7 168.9 196.5 184.7 185.7 120 3.56 1 FALSE 1.14E-05 2.63E-08 1.537 -250 40970 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYAEGMNR [R].aYAEGMNR.[A] N-Term(TMT6plex) 1 Q9CZU6 "Citrate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Cs PE=1 SV=1" Q9CZU6 "Citrate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Cs PE=1 SV=1" 0 2 2 0.669 0 1 1 1 570.78778 1140.56828 1140.56691 1.21 0.00069 0/0 0 0 212532048 HCD 30 MS2 5.342062 577.8 6.845 43.5644 11022 11022 11021 QEplus033719.raw F4 529.4 486 647.7 702.1 484.3 617.6 76 2.9 1 FALSE 3.35E-05 0.001217 0.645 -250 40977 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASGQPQSAAASGDK [R].aSGQPQSAAASGDk.[A] N-Term(TMT6plex); K14(TMT6plex) 8 Q3TGS9 ADP-ribosylation factor GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Arfgap1 PE=1 SV=1 Q9EPJ9-2; Q3TGS9; V9GXM1; Q6PB94; Q05BC5; Q9EPJ9; Q05DE0; V9GWV1 Isoform 2 of ADP-ribosylation factor GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Arfgap1; ADP-ribosylation factor GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Arfgap1 PE=1 SV=1; ADP-ribosylation factor GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Arfgap1 PE=1 SV=1; Arfgap1 protein OS=Mus musculus OX=10090 GN=Arfgap1 PE=2 SV=1; Arfgap1 protein OS=Mus musculus OX=10090 GN=Arfgap1 PE=2 SV=1; ADP-ribosylation factor GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Arfgap1 PE=1 SV=2; Arfgap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Arfgap1 PE=2 SV=1; ADP-ribosylation factor GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Arfgap1 PE=1 SV=1 0 2 2 0.6918 0 1 1 1 866.9668 1732.92632 1732.923 1.92 0.00166 0/0 0 0 4225741.5 HCD 30 MS2 0 153.3 110 43.567 11023 11023 11021 QEplus033719.raw F4 155.7 139.3 148.8 114.9 200.5 160.7 338 4.64 1 FALSE 1.14E-05 6.31E-16 3.119 -250 40985 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGGQTAPASIR [R].dGGQTAPASIR.[L] N-Term(TMT6plex) 6 A0A0J9YUQ8; P13020-2 Actin-depolymerizing factor (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1;Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn Q3UCW8; Q3U9Q8; A0A0J9YUQ8; P13020-2; Q3TGJ9; P13020 Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1; Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Gelsolin OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=3 0 2 2 0.5941 0 1 1 1 651.3548 1301.70232 1301.70109 0.94 0.00061 0/0 0 0 190302480 HCD 30 MS2 0.5445107 8.29 43.5692 11024 11024 11021 QEplus033719.raw F4 261 3.03 2 FALSE 1.14E-05 2.16E-07 1.364 -250 41007 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENDPSVMR [K].eNDPSVMR.[S] N-Term(TMT6plex) 2 Q5SWU9 Acetyl-CoA carboxylase 1 OS=Mus musculus OX=10090 GN=Acaca PE=1 SV=1 Q5SWU9-2; Q5SWU9 Isoform 2 of Acetyl-CoA carboxylase 1 OS=Mus musculus OX=10090 GN=Acaca; Acetyl-CoA carboxylase 1 OS=Mus musculus OX=10090 GN=Acaca PE=1 SV=1 0 2 2 0.6007 0 1 1 1 588.79834 1176.5894 1176.58804 1.16 0.00068 0/0 0 0 8496124 HCD 30 MS2 25.04906 726 110 43.5836 11030 11030 11021 QEplus033719.raw F4 785.6 531.1 733.6 768.6 651.1 885.8 115 2.78 1 FALSE 0.0002518 0.005229 0.496 -250 41013 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAGSIPGER [R].sAGSIPGER.[S] N-Term(TMT6plex) 9 Q04207 Transcription factor p65 OS=Mus musculus OX=10090 GN=Rela PE=1 SV=1 A0A494B901; Q4U113; Q04207; Q3U3Q8; Q04207-2; A0A494BA44; Q8BTL4; A4QPD3; P15307 Transcription factor p65 (Fragment) OS=Mus musculus OX=10090 GN=Rela PE=4 SV=1; NF-kB RelA splice variant 1 OS=Mus musculus OX=10090 GN=Rela PE=1 SV=1; Transcription factor p65 OS=Mus musculus OX=10090 GN=Rela PE=1 SV=1; RHD domain-containing protein OS=Mus musculus OX=10090 GN=Rela PE=2 SV=1; Isoform p65 delta of Transcription factor p65 OS=Mus musculus OX=10090 GN=Rela; Transcription factor p65 OS=Mus musculus OX=10090 GN=Rela PE=1 SV=1; RHD domain-containing protein OS=Mus musculus OX=10090 GN=Rela PE=2 SV=1; Proto-oncogene c-Rel OS=Mus musculus OX=10090 GN=Rel PE=1 SV=1; Proto-oncogene c-Rel OS=Mus musculus OX=10090 GN=Rel PE=1 SV=2 0 2 2 0.3408 0 1 1 1 551.80737 1102.60747 1102.6054 1.87 0.00103 0/0 0 0 7753855 HCD 30 MS2 0 619.1 110 43.586 11031 11031 11021 QEplus033719.raw F4 665.2 544.8 671.8 476.9 708.9 647 281 2.67 1 FALSE 1.14E-05 3.37E-06 1.137 -250 41018 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYVDQACR [K].tYVDQAcR.[A] N-Term(TMT6plex); C7(Carbamidomethyl) 4 Q3UNA4 NTF2-related export protein 2 OS=Mus musculus OX=10090 GN=Nxt2 PE=2 SV=1 Q3UNA4; Q9QZV9; Q6P250; Q3UNA4-2 NTF2-related export protein 2 OS=Mus musculus OX=10090 GN=Nxt2 PE=2 SV=1; NTF2-related export protein 1 OS=Mus musculus OX=10090 GN=Nxt1 PE=1 SV=2; Nxt2 protein (Fragment) OS=Mus musculus OX=10090 GN=Nxt2 PE=2 SV=1; Isoform 2 of NTF2-related export protein 2 OS=Mus musculus OX=10090 GN=Nxt2 0 2 2 0.7013 0 1 1 1 621.31171 1241.61614 1241.61459 1.25 0.00077 0/0 0 0 7726221.5 HCD 30 MS2 6.685002 537.8 110 43.5934 11033 11033 11032 QEplus033719.raw F4 551.4 538.4 581.3 367.1 714.1 474.4 100 2.98 1 FALSE 3.35E-05 0.001242 0.643 -250 41026 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AASQGYTVAR [R].aASQGYTVAR.[I] N-Term(TMT6plex) 6 J3QJX3 Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=1 Q80YC0; J3QJX3; Q5DTL8; Q9Z2G6; Q6GTY4; Q6PFR3 Sel1l protein (Fragment) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1; Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=1; MKIAA4137 protein (Fragment) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1; Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=2; Sel-1 suppressor of lin-12-like (C. elegans) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1; Sel1l protein (Fragment) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1 0 2 2 0.5815 0 1 1 1 626.8468 1252.68633 1252.68472 1.29 0.00081 0/0 0 0 11339847 HCD 30 MS2 24.14565 506 110 43.5959 11034 11034 11032 QEplus033719.raw F4 675.3 395.4 502.9 458.4 551 452.8 353 3.13 1 FALSE 1.14E-05 3.46E-08 1.515 -250 41051 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPMVAR [K].ePMVAR.[K] N-Term(TMT6plex) 11 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" Q3URW8; B9EKJ1; E9Q447; B2RXX6; A3KGU9; Q3V1V5; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.2817 0 1 1 1 466.26593 931.52458 931.52325 1.43 0.00067 0/0 0 0 38838868 HCD 30 MS2 42.00997 603.5 26.351 43.6027 11037 11037 11032 QEplus033719.raw F4 624.6 414.5 689.9 530.8 605.8 755.2 179 2.13 2 FALSE 0.002352 0.04707 0.151 -250 41057 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLPQAQR [K].dLPQAQR.[M] N-Term(TMT6plex) 1 Q3SZV7 TREMBL:Q3SZV7 (Bos taurus) Similar to hemopexin Q3SZV7 TREMBL:Q3SZV7 (Bos taurus) Similar to hemopexin 0 2 2 0.4889 0 1 1 1 528.80334 1056.59941 1056.59992 -0.48 -0.00026 0/0 0 0 33353290 HCD 30 MS2 31.71205 708.7 42.275 43.6049 11038 11038 11032 QEplus033719.raw F4 916.6 307 426.8 233.5 1925.6 442.6 131 1.8 1 TRUE 0.001092 0.01413 0.344 -250 41066 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTAEEEDEADPK [K].rTAEEEDEADPk.[R] N-Term(TMT6plex); K12(TMT6plex) 2 Q66JR8 Ptms protein OS=Mus musculus OX=10090 GN=Ptms PE=2 SV=1 Q66JR8; Q9D0J8 Ptms protein OS=Mus musculus OX=10090 GN=Ptms PE=2 SV=1; Parathymosin OS=Mus musculus OX=10090 GN=Ptms PE=1 SV=3 1 4 4 0.4934 0 1 1 1 462.74072 1847.94106 1847.93871 1.27 0.00059 0/0 0 0 21360864 HCD 30 MS2 41.81149 1034.8 68.895 43.6072 11039 11039 11032 QEplus033719.raw F4 1179 819.7 1001.6 852.1 1351 1005.5 243 3.77 1 FALSE 1.14E-05 0.0005096 0.721 -250 41084 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYIETDPANRDR [K].rYIETDPANRDR.[R] N-Term(TMT6plex) 6 P13020-2; Q3SX14 Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn;TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin Q3UCW8; Q3U9Q8; P13020-2; Q3TGJ9; P13020; Q3SX14 Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Gelsolin OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=3; TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin 2 3 3 0.3957 0 1 1 1 578.9754 1734.91166 1734.90846 1.84 0.00106 0/0 0 0 17770558 HCD 30 MS2 19.90097 409 110 43.6119 11041 11041 11032 QEplus033719.raw F4 417.5 346.2 461.5 334.8 461.8 432.2 325 2.78 2 TRUE 1.14E-05 1.58E-06 1.199 -250 41091 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLPQSVR [R].hLPQSVR.[I] N-Term(TMT6plex) 2 Q91YR7 Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1 Q91YR7; Q91YR7-2 Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1; Isoform 2 of Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 0 3 3 0.341 0 1 1 1 355.88409 1065.63773 1065.63664 1.02 0.00036 0/0 0 0 13510997 HCD 30 MS2 41.70107 389.7 86.01 43.6142 11042 11042 11032 QEplus033719.raw F4 461.5 257.6 404.9 341 416 457.3 100 2.61 1 FALSE 0.002056 0.03679 0.187 -250 41110 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSEVNCYR [K].tSEVNcYR.[C] N-Term(TMT6plex); C6(Carbamidomethyl) 5 Q3ULK8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=1 Q3ULK8; P53996-2; Q3U5V2; A0A0N4SVS6; P53996 Uncharacterized protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=1; Isoform 2 of Cellular nucleic acid-binding protein OS=Mus musculus OX=10090 GN=Cnbp; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cnbp PE=2 SV=1; Cellular nucleic acid-binding protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=1; Cellular nucleic acid-binding protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=2 0 2 2 0.75 0 1 1 1 629.30988 1257.61247 1257.6095 2.36 0.00149 0/0 0 0 26493020 HCD 30 MS2 3.27018 851.4 110 43.624 11045 11045 11043 QEplus033719.raw F4 907.4 750.7 987.9 588.8 1004.9 868.5 79 2.8 1 FALSE 0.0002518 0.005176 0.497 -250 41126 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDTSGEYK [K].nDTSGEYk.[K] N-Term(TMT6plex); K8(TMT6plex) 8 P14824; Q99JX6 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3;Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 Q3V2Z4; P14824; F8WIT2; Q3UI56; Q3TUI1; Q8CEX0; Q99JX6; Q3UDK4 Annexin OS=Mus musculus OX=10090 PE=2 SV=1; Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 0 2 2 0.5687 0 1 1 1 686.36224 1371.71721 1371.71563 1.15 0.00079 0/0 0 0 28641352 HCD 30 MS2 0 832.7 63.479 43.6285 11047 11047 11043 QEplus033719.raw F4 974.3 587.9 906.1 781.6 1000.1 746.5 191 2.62 2 FALSE 3.35E-05 0.001395 0.632 -250 41133 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQEEVAR [R].mQEEVAR.[R] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.3291 0 1 1 1 546.28992 1091.57256 1091.57166 0.82 0.00045 0/0 0 0 29862598 HCD 30 MS2 4.42476 967.1 61.724 43.6308 11048 11048 11043 QEplus033719.raw F4 1090.4 817.7 1012.1 802.4 1049.2 1030.7 227 3.13 2 FALSE 0.0003408 0.006579 0.466 -250 41147 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDEETEHTMR [R].vDEETEHTMR.[V] N-Term(TMT6plex) 4 Q60847 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3 Q60847; E9PX70; Q60847-5; Q60847-2 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3; Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1; Isoform 5 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 2 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 0 3 3 0.1772 0 1 1 1 492.573 1475.70444 1475.69977 3.16 0.00156 0/0 0 0 20926050 HCD 30 MS2 25.79344 525.1 56.4 43.6355 11050 11050 11043 QEplus033719.raw F4 531.3 380.3 513.1 404.6 789.4 531.8 61 4.29 1 FALSE 1.14E-05 1.05E-05 1.044 -250 41153 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETITESAGR [K].eTITESAGR.[Q] N-Term(TMT6plex) 3 A0A0A6YVS2 Calcium load-activated calcium channel (Fragment) OS=Mus musculus OX=10090 GN=Tmco1 PE=1 SV=1 A0A0A6YVS2; Q921L3; Q3V4A0 Calcium load-activated calcium channel (Fragment) OS=Mus musculus OX=10090 GN=Tmco1 PE=1 SV=1; Calcium load-activated calcium channel OS=Mus musculus OX=10090 GN=Tmco1 PE=1 SV=1; Calcium load-activated calcium channel (Fragment) OS=Mus musculus OX=10090 GN=Tmco1 PE=2 SV=1 0 2 2 0.4561 0 1 1 1 596.82288 1192.63848 1192.6371 1.16 0.00069 0/0 0 0 19691944 HCD 30 MS2 13.96102 802 110 43.638 11051 11051 11043 QEplus033719.raw F4 823.4 567.6 841.1 701.2 879 999.4 242 3.42 1 FALSE 1.14E-05 3.80E-06 1.127 -250 41161 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEAQEEEASVR [K].aEAQEEEASVR.[A] N-Term(TMT6plex) 6 Q9Z0H1 WD repeat-containing protein 46 OS=Mus musculus OX=10090 GN=Wdr46 PE=2 SV=1 Q8R0T3; A0A3Q4EBZ6; Q9Z0H1; A0A068BFS0; A0A068BIU7; Q3UM80 Wdr46 protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr46 PE=2 SV=1; WD repeat-containing protein 46 (Fragment) OS=Mus musculus OX=10090 GN=Wdr46 PE=1 SV=1; WD repeat-containing protein 46 OS=Mus musculus OX=10090 GN=Wdr46 PE=2 SV=1; WD repeat domain 46 OS=Mus musculus OX=10090 GN=Wdr46 PE=2 SV=1; Putative WD repeat domain 46 isoform 1 OS=Mus musculus OX=10090 GN=Wdr46 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr46 PE=2 SV=1 0 2 2 0.7266 0 1 1 1 724.36517 1447.72307 1447.72262 0.31 0.00023 0/0 0 0 5094624 HCD 30 MS2 46.94786 252.3 110 43.6406 11052 11052 11043 QEplus033719.raw F4 247.2 214.7 284 216.2 300 251.7 131 3.95 1 FALSE 1.14E-05 5.90E-09 1.661 -250 41168 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADDSASEASSTGQEPCPR [K].aDDSASEASSTGQEPcPR.[S] N-Term(TMT6plex); C16(Carbamidomethyl) 5 G3UZG5 Kelch domain-containing protein 4 OS=Mus musculus OX=10090 GN=Klhdc4 PE=1 SV=1 G3UZG5; G3X961; Q6PE06; G3UZ63; Q921I2 Kelch domain-containing protein 4 OS=Mus musculus OX=10090 GN=Klhdc4 PE=1 SV=1; Kelch domain-containing protein 4 OS=Mus musculus OX=10090 GN=Klhdc4 PE=1 SV=1; Klhdc4 protein OS=Mus musculus OX=10090 GN=Klhdc4 PE=2 SV=1; Kelch domain-containing protein 4 OS=Mus musculus OX=10090 GN=Klhdc4 PE=1 SV=1; Kelch domain-containing protein 4 OS=Mus musculus OX=10090 GN=Klhdc4 PE=2 SV=2 0 3 3 0.8964 0 1 1 1 698.64716 2093.92691 2093.92431 1.25 0.00087 0/0 0 0 3521541.75 HCD 30 MS2 8.929635 59.9 110 43.6431 11053 11053 11043 QEplus033719.raw F4 63 57.6 69.9 46.1 64.2 58.8 22 6.85 1 FALSE 1.14E-05 6.31E-16 3.039 -250 41172 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AASCLEGDR [R].aAScLEGDR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 4 Q9CQ60 6-phosphogluconolactonase OS=Mus musculus OX=10090 GN=Pgls PE=1 SV=1 Q8C6M6; F6X8L5; Q9CQ60; Q8CBG6 Glucosamine_iso domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; 6-phosphogluconolactonase (Fragment) OS=Mus musculus OX=10090 GN=Pgls PE=1 SV=1; 6-phosphogluconolactonase OS=Mus musculus OX=10090 GN=Pgls PE=1 SV=1; 6-phosphogluconolactonase OS=Mus musculus OX=10090 GN=Pgls PE=1 SV=1 0 2 2 0.429 0 1 1 1 604.29999 1207.5927 1207.59385 -0.95 -0.00058 0/0 0 0 10997778 HCD 30 MS2 23.26013 733.9 110 43.6504 11055 11055 11054 QEplus033719.raw F4 737 584.4 807.6 725.1 722.8 826.8 101 3.03 1 FALSE 1.14E-05 4.21E-06 1.119 -250 41180 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTAEEEDEADPK [K].rTAEEEDEADPk.[R] N-Term(TMT6plex); K12(TMT6plex) 2 Q66JR8 Ptms protein OS=Mus musculus OX=10090 GN=Ptms PE=2 SV=1 Q66JR8; Q9D0J8 Ptms protein OS=Mus musculus OX=10090 GN=Ptms PE=2 SV=1; Parathymosin OS=Mus musculus OX=10090 GN=Ptms PE=1 SV=3 1 2 2 0.7562 0 1 1 1 924.47626 1847.94524 1847.93871 3.53 0.00327 0/0 0 0 2036845.25 HCD 30 MS2 0 82.6 110 43.6529 11056 11056 11054 QEplus033719.raw F4 94.7 64.2 83.7 46.1 129.9 77.3 259 3.2 1 FALSE 1.14E-05 2.11E-09 1.746 -250 41186 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLTPQGQR [R].kLTPQGQR.[D] N-Term(TMT6plex); K1(TMT6plex) 5 Q5M9P3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1 D3YUT3; D3Z722; D3Z5R8; Q5M9P3; Q9CZX8 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=2; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=1; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=8; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=3 1 3 3 0.4362 0 1 1 1 462.62604 1385.86356 1385.8629 0.47 0.00022 0/0 0 0 85532184 HCD 30 MS2 23.2662 834.8 14.875 43.6552 11057 11057 11054 QEplus033719.raw F4 934.4 694.7 836.8 784.7 974.1 784.1 243 2.82 1 FALSE 0.0009171 0.01264 0.364 -250 41204 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MAEMSR [R].mAEMSR.[A] N-Term(TMT6plex) 17 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q9QXS1-15; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec" 0 2 2 0.2412 0 1 1 1 477.24203 953.47679 953.47459 2.31 0.0011 0/0 0 0 37693512 HCD 30 MS2 42.0982 867.6 20.65 43.6619 11060 11060 11054 QEplus033719.raw F4 813.6 834.3 987.7 711.9 896.8 961.3 25 2.28 2 FALSE 0.006674 0.1058 -0.009 -250 41213 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQIPTQR [K].tQIPTQR.[Y] N-Term(TMT6plex) 3 Q3TS44 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 A0A1B0GS70; Q8BTU5; Q3TS44 Proteasome subunit alpha type-1 OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 0 2 2 0.3636 0 1 1 1 536.81995 1072.63262 1072.63122 1.3 0.0007 0/0 0 0 37582072 HCD 30 MS2 55.29765 631.2 23.106 43.6642 11061 11061 11054 QEplus033719.raw F4 703.4 514.5 670.4 538.3 703.8 656.6 350 2.42 1 FALSE 0.00171 0.02839 0.225 -250 41219 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DETEFR [KR].dETEFR.[ND] N-Term(TMT6plex) 2 Q4VA29 "RNA transcription, translation and transport factor protein OS=Mus musculus OX=10090 GN=Rtraf PE=1 SV=1" Q4VA29; A2ARA8 "RNA transcription, translation and transport factor protein OS=Mus musculus OX=10090 GN=Rtraf PE=1 SV=1; Integrin alpha-8 OS=Mus musculus OX=10090 GN=Itga8 PE=1 SV=1" 0 2 2 0.4545 0 1 1 1 513.25903 1025.51079 1025.51011 0.67 0.00034 0/0 0 0 22737894 HCD 30 MS2 14.19209 850.5 74.72 43.6665 11062 11062 11054 QEplus033719.raw F4 983.6 573.6 901.8 676.2 986.2 981.7 76 2.2 1 FALSE 0.003592 0.06865 0.091 -250 41237 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLTPQGQR [R].kLTPQGQR.[D] N-Term(TMT6plex); K1(TMT6plex) 5 Q5M9P3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1 D3YUT3; D3Z722; D3Z5R8; Q5M9P3; Q9CZX8 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=2; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=1; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=8; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=3 1 2 2 0.6091 0 1 1 1 693.43591 1385.86455 1385.8629 1.19 0.00082 0/0 0 0 18002576 HCD 30 MS2 0 401.7 110 43.681 11067 11067 11065 QEplus033719.raw F4 449.4 335.6 410.1 384.2 489.8 341.1 245 2.2 1 FALSE 0.001877 0.03159 0.209 -250 41246 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQFHDAK [R].qQFHDAk.[F] N-Term(TMT6plex); K7(TMT6plex) 3 Q9D0R2 "Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2" Q3U630; Q9D0R2; Q99KJ4 "Threonyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1; Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2; Threonyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1" 0 3 3 0.6413 0 1 1 1 444.58801 1331.74948 1331.74721 1.71 0.00076 0/0 0 0 63320156 HCD 30 MS2 23.33135 744.3 27.728 43.6833 11068 11068 11065 QEplus033719.raw F4 881.1 567.4 874.1 752 616.2 774.7 383 3.68 1 FALSE 1.14E-05 0.0006728 0.697 -250 41251 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPPGFDR [K].rPPGFDR.[V] N-Term(TMT6plex) 11 Q3TUR1 Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1 Q3TUR1; Q3UA28; Q3TG02; Q3U573; Q8BWT4; Q3U9H4; Q5U412; Q3U547; Q8BMP9; A0A1S6GWK0; Q3TVN9 Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1 0 3 3 0.4368 0 1 1 1 358.54028 1073.6063 1073.60534 0.89 0.00032 0/0 0 0 61320416 HCD 30 MS2 14.01095 305.3 19.68 43.6855 11069 11069 11065 QEplus033719.raw F4 336.8 252 332.7 245.6 316.9 347.7 367 2.61 1 FALSE 0.001177 0.01583 0.323 -250 41260 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FSPDGNR [R].fSPDGNR.[F] N-Term(TMT6plex) 7 O88342 WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3 Q3TNK2; O88342; Q9DC08; Q3TE06; Q3U136; Q9DBM8; Q80ZI9 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat domain 1 (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1 0 2 2 0.6339 0 1 1 1 511.26736 1021.52745 1021.52642 1.01 0.00051 0/0 0 0 44458936 HCD 30 MS2 36.22657 780.2 22.361 43.6878 11070 11070 11065 QEplus033719.raw F4 791.3 588.9 740.4 701 1047.7 812.1 175 2.24 1 FALSE 0.002853 0.05574 0.126 -250 41263 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSVPGVR [R].sSVPGVR.[L] N-Term(TMT6plex) 10 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; Q3TWV0; A2AKJ2; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.3318 0 1 1 1 465.78268 930.55809 930.557 1.18 0.00055 0/0 0 0 30550256 HCD 30 MS2 48.41541 733.2 27.568 43.6923 11072 11072 11065 QEplus033719.raw F4 775.7 661.3 760.7 583 858.9 759.8 199 2.11 2 FALSE 0.001001 0.0132 0.356 -250 41292 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SATYVNTEGR [K].sATYVNTEGR.[A] N-Term(TMT6plex) 3 Q91VD9 "NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs1 PE=1 SV=2" Q3TIU7; Q91VD9; Q3UIQ2 "NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs1 PE=2 SV=1; NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs1 PE=1 SV=2; NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs1 PE=2 SV=1" 0 2 2 0.6684 0 1 1 1 663.84711 1326.68694 1326.68511 1.38 0.00091 0/0 0 0 10577032 HCD 30 MS2 0 596.8 110 43.6993 11075 11075 11065 QEplus033719.raw F4 618.9 453.5 648.5 725.5 485.6 648.6 196 3.77 1 FALSE 1.14E-05 4.84E-08 1.487 -250 41297 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMAGDNK [R].eMAGDNk.[L] N-Term(TMT6plex); K7(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 0 2 2 0.3721 0 1 1 1 611.8291 1222.65093 1222.65019 0.6 0.00037 0/0 0 0 8224795.5 HCD 30 MS2 14.1315 695.4 110 43.7066 11077 11077 11076 QEplus033719.raw F4 1465.4 381.5 642.2 382.2 400.5 900.8 246 2.15 1 FALSE 0.0008445 0.01172 0.377 -250 41303 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TECPNTNEGK [K].tEcPNTNEGk.[S] N-Term(TMT6plex); C3(Carbamidomethyl); K10(TMT6plex) 12 Q8CAQ8; A0A0U1RP81 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1;MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q8CAQ8-4; Q3U7N2; E9PVS5; Q8CAQ8; Q8CAQ8-2; Q3TZK4; A0A0U1RP81; Q3TVZ5; Q8CAQ8-3; Q3TQL4; A0A1B0GX08 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; Isoform 4 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 0 2 2 0.7396 0 1 1 1 804.40918 1607.81108 1607.80994 0.71 0.00057 0/0 0 0 6675309 HCD 30 MS2 4.9013 457 110 43.7091 11078 11078 11076 QEplus033719.raw F4 464.3 378.7 498.6 378.1 517.7 504.3 193 4.07 2 FALSE 1.14E-05 3.76E-08 1.508 -250 41308 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTNYNMEHIR [K].hTNYNMEHIR.[V] N-Term(TMT6plex) 3 A1BN54; Q7TPR4 Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1;Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 Q99LJ3; A1BN54; Q7TPR4 Actn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Actn1 PE=2 SV=1; Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1; Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 0 3 3 0.6904 0 1 1 1 515.2597 1543.76456 1543.76371 0.55 0.00028 0/0 0 0 10649972 HCD 30 MS2 57.29595 726.4 110 43.7117 11079 11079 11076 QEplus033719.raw F4 850.2 514.8 816 504.7 801.9 870.5 124 5.2 2 FALSE 1.14E-05 4.14E-09 1.69 -250 41326 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DALSEETR [K].dALSEETR.[N] N-Term(TMT6plex) 4 B2RWW2 Golgb1 protein OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1 B2RWW2; E9QAH1; Q571K1; E9PVZ8 "Golgb1 protein OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1; Golgi autoantigen, golgin subfamily b, macrogolgin 1 OS=Mus musculus OX=10090 GN=Golgb1 PE=1 SV=1; MKIAA4151 protein (Fragment) OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1; Golgi autoantigen, golgin subfamily b, macrogolgin 1 OS=Mus musculus OX=10090 GN=Golgb1 PE=1 SV=1" 0 2 2 0.3658 0 1 1 1 575.29993 1149.59258 1149.5949 -2.02 -0.00116 0/0 0 0 8273631 HCD 30 MS2 43.64008 846.7 110 43.7192 11082 11082 11076 QEplus033719.raw F4 1270.9 608.8 839 539.9 806.8 1015 149 2.98 1 FALSE 1.14E-05 0.0007972 0.682 -250 41333 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILCAHGGR [K].iLcAHGGR.[M] N-Term(TMT6plex); C3(Carbamidomethyl) 6 D3Z5I1 Zinc finger CCCH-type antiviral protein 1 OS=Mus musculus OX=10090 GN=Zc3hav1 PE=1 SV=1 Q3UPF5; D3Z5I1; Q3UPF5-2; Q9D6F5; G3X9X5; Q8K302 Zinc finger CCCH-type antiviral protein 1 OS=Mus musculus OX=10090 GN=Zc3hav1 PE=1 SV=1; Zinc finger CCCH-type antiviral protein 1 OS=Mus musculus OX=10090 GN=Zc3hav1 PE=1 SV=1; Isoform 2 of Zinc finger CCCH-type antiviral protein 1 OS=Mus musculus OX=10090 GN=Zc3hav1; HTH_53 domain-containing protein OS=Mus musculus OX=10090 GN=Zc3hav1 PE=2 SV=1; Zinc finger CCCH-type antiviral protein 1 OS=Mus musculus OX=10090 GN=Zc3hav1 PE=1 SV=1; Zc3hav1 protein OS=Mus musculus OX=10090 GN=Zc3hav1 PE=2 SV=1 0 3 3 0.5819 0 1 1 1 371.54428 1112.61829 1112.61961 -1.19 -0.00044 0/0 0 0 7763130 HCD 30 MS2 78.17095 596 79.613 43.7214 11083 11083 11076 QEplus033719.raw F4 703.3 485.4 590.7 443.7 723 630.1 127 3.54 1 FALSE 5.44E-05 0.002301 0.585 -250 41341 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKEDETEDRGDCK [K].akEDETEDRGDck.[G] N-Term(TMT6plex); K2(TMT6plex); C12(Carbamidomethyl); K13(TMT6plex) 5 A0A5H1ZRL7 Transformation-related protein 53-binding protein 1 OS=Mus musculus OX=10090 GN=Trp53bp1 PE=1 SV=1 Q8BLA0; P70399-5; A0A5H1ZRL7; A2AU90; P70399 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Trp53bp1 PE=2 SV=1; Isoform 2 of TP53-binding protein 1 OS=Mus musculus OX=10090 GN=Tp53bp1; Transformation-related protein 53-binding protein 1 OS=Mus musculus OX=10090 GN=Trp53bp1 PE=1 SV=1; Transformation-related protein 53-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Trp53bp1 PE=1 SV=2; TP53-binding protein 1 OS=Mus musculus OX=10090 GN=Tp53bp1 PE=1 SV=3 2 4 4 0.6544 0 1 1 1 560.79144 2240.14394 2240.14319 0.34 0.00019 0/0 0 0 6411880 HCD 30 MS2 4.330312 525.1 110 43.7239 11084 11084 11076 QEplus033719.raw F4 582.7 379.2 555.3 510.1 595.1 527.9 288 2.72 1 FALSE 1.14E-05 0.0005567 0.713 -250 41388 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YLPHSAGR [K].yLPHSAGR.[Y] N-Term(TMT6plex) 4 Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 P97461; D3Z1S8; D3YYM6; Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=3; 40S ribosomal protein S5 (Fragment) OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1; 40S ribosomal protein S5 (Fragment) OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1; 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 0 3 3 0.6421 0 1 1 1 377.21609 1129.63373 1129.63156 1.92 0.00072 0/0 0 0 163606480 HCD 30 MS2 43.75476 256.6 5.309 43.7408 11090 11090 11087 QEplus033719.raw F4 224.7 232.2 307.4 210 285.5 279.7 247 2.99 1 FALSE 0.0009542 0.01297 0.359 -250 41411 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSTASVGR [K].vSTASVGR.[F] N-Term(TMT6plex) 2 Q80U76 Ribosome biogenesis regulatory protein (Fragment) OS=Mus musculus OX=10090 GN=Rrs1 PE=2 SV=2 Q80U76; Q9CYH6 Ribosome biogenesis regulatory protein (Fragment) OS=Mus musculus OX=10090 GN=Rrs1 PE=2 SV=2; Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 PE=1 SV=1 0 2 2 0.3496 0 1 1 1 503.29919 1005.59111 1005.58902 2.08 0.00104 0/0 0 0 20751914 HCD 30 MS2 38.6877 865.7 53.303 43.7476 11093 11093 11087 QEplus033719.raw F4 955 745.4 986.9 620 964.2 922.6 180 2.46 1 FALSE 0.0002419 0.005013 0.501 -250 41421 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDAGPAGPK [K].gDAGPAGPk.[G] N-Term(TMT6plex); K9(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 2 2 0.5246 0 1 1 1 614.35895 1227.71062 1227.70976 0.7 0.00043 0/0 0 0 19342788 HCD 30 MS2 3.756736 1146.2 110 43.7501 11094 11094 11087 QEplus033719.raw F4 1401.9 943.7 1285.8 1017.4 1310.1 918.2 257 3.45 1 FALSE 1.14E-05 3.18E-06 1.142 -250 41434 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVTDTNSR [R].iVTDTNSR.[V] N-Term(TMT6plex) 2 Q3UIA2 Rho GTPase-activating protein 17 OS=Mus musculus OX=10090 GN=Arhgap17 PE=1 SV=1 Q3UIA2-2; Q3UIA2 Isoform 2 of Rho GTPase-activating protein 17 OS=Mus musculus OX=10090 GN=Arhgap17; Rho GTPase-activating protein 17 OS=Mus musculus OX=10090 GN=Arhgap17 PE=1 SV=1 0 2 2 0.4603 0 1 1 1 567.82129 1134.6353 1134.63162 3.25 0.00184 0/0 0 0 5307910.5 HCD 30 MS2 48.17724 552.8 110 43.7551 11096 11096 11087 QEplus033719.raw F4 561.6 494.4 639.6 422.5 604.8 593.7 257 2.39 1 FALSE 0.000108 0.003049 0.556 -250 41470 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDDDPLNAR [R].rDDDPLNAR.[M] N-Term(TMT6plex) 1 Q02788 Collagen alpha-2(VI) chain OS=Mus musculus OX=10090 GN=Col6a2 PE=1 SV=3 Q02788 Collagen alpha-2(VI) chain OS=Mus musculus OX=10090 GN=Col6a2 PE=1 SV=3 1 3 3 0.688 0 1 1 1 434.23212 1300.6818 1300.68069 0.85 0.00037 0/0 0 0 17273086 HCD 30 MS2 38.88852 364.7 51.913 43.7804 11106 11106 11098 QEplus033719.raw F4 430.9 318.1 354.2 303.6 455.4 325.7 169 3.75 1 FALSE 1.14E-05 3.99E-06 1.123 -250 41483 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HMGIGKR [R].hMGIGkR.[K] N-Term(TMT6plex); K6(TMT6plex) 2 Q5I0T8 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 Q5I0T8; A2A547 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1; Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 1 3 3 0.4413 0 1 1 1 419.59369 1256.76651 1256.76617 0.28 0.00012 0/0 0 0 14271077 HCD 30 MS2 36.3898 1061.7 87.952 43.7849 11108 11108 11098 QEplus033719.raw F4 1076.6 963.2 1113.1 959.2 1311.5 946.5 282 2.81 1 FALSE 0.0002218 0.004642 0.51 -250 41492 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSPLATR [K].dSPLATR.[H] N-Term(TMT6plex) 6 Q9ES00 Ubiquitin conjugation factor E4 B OS=Mus musculus OX=10090 GN=Ube4b PE=1 SV=3 Q9ES00; A0A571BD95; Q80TU3; A0A5F8MP95; Q6NWW1; G3UZD6 "Ubiquitin conjugation factor E4 B OS=Mus musculus OX=10090 GN=Ube4b PE=1 SV=3; Ubiquitin conjugation factor E4 B OS=Mus musculus OX=10090 GN=Ube4b PE=1 SV=1; MKIAA0684 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0684 PE=2 SV=1; Ubiquitin conjugation factor E4 B OS=Mus musculus OX=10090 GN=Ube4b PE=1 SV=1; Ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) OS=Mus musculus OX=10090 GN=Ube4b PE=2 SV=1; Ubiquitin conjugation factor E4 B OS=Mus musculus OX=10090 GN=Ube4b PE=1 SV=1" 0 2 2 0.1814 0 1 1 1 494.78479 988.5623 988.56248 -0.17 -0.00009 0/0 0 0 26808856 HCD 30 MS2 30.3253 1235.8 110 43.7922 11110 11110 11109 QEplus033719.raw F4 1209 1049.5 1367.4 915.3 1574.4 1299.2 245 2.26 1 FALSE 0.001429 0.02069 0.275 -250 41501 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGIYETR [R].sGIYETR.[C] N-Term(TMT6plex) 4 Q6A0C9 AP-2 complex subunit mu (Fragment) OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1 Q6A0C9; Q5FWI9; Q3TWV4; Q3TH69 AP-2 complex subunit mu (Fragment) OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1; AP-2 complex subunit mu OS=Mus musculus OX=10090 GN=Ap2m1 PE=1 SV=1; AP-2 complex subunit mu OS=Mus musculus OX=10090 GN=Ap2m1 PE=1 SV=1; AP-2 complex subunit mu OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1 0 2 2 0.2881 0 1 1 1 527.79089 1054.57451 1054.57304 1.39 0.00074 0/0 0 0 19713806 HCD 30 MS2 40.098 859 57.247 43.7945 11111 11111 11109 QEplus033719.raw F4 933.9 805.8 869.7 756.1 1012.3 776.4 120 2.36 1 FALSE 0.001343 0.01896 0.29 -250 41522 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEYEEDRGK [K].aEYEEDRGk.[G] N-Term(TMT6plex); K9(TMT6plex) 5 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; A0A571BF46; A0A1B0GSF5; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 1 3 3 0.7098 0 1 1 1 518.9447 1554.81955 1554.81641 2.02 0.00105 0/0 0 0 7738589 HCD 30 MS2 21.89399 801 110 43.806 11116 11116 11109 QEplus033719.raw F4 931.7 269.5 746.8 1250.5 338.8 1268.6 262 2.86 1 FALSE 1.14E-05 0.0002352 0.786 -250 41549 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSHMLEASR [K].dSHMLEASR.[L] N-Term(TMT6plex) 2 Q52KR3 Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2 PE=1 SV=2 Q52KR3-6; Q52KR3 Isoform 6 of Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2; Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2 PE=1 SV=2 0 2 2 0.5229 0 1 1 1 637.82263 1274.63799 1274.63605 1.52 0.00097 0/0 0 0 2844537.75 HCD 30 MS2 47.10268 252.7 110 43.8135 11119 11119 11109 QEplus033719.raw F4 298.8 207.6 270.8 216.7 277.1 245.2 92 3.71 1 FALSE 1.14E-05 7.94E-07 1.256 -250 41592 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FSEGTSADR [R].fSEGTSADR.[E] N-Term(TMT6plex) 2 P62334 26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=1 Q8QZS9; P62334 Psmc6 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc6 PE=2 SV=1; 26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=1 0 2 2 0.6364 0 1 1 1 599.79901 1198.59075 1198.59015 0.5 0.0003 0/0 0 0 16417723 HCD 30 MS2 26.98051 905.1 110 43.8324 11126 11126 11120 QEplus033719.raw F4 1103.6 613.4 904.8 1202.2 672.4 934.3 85 3.41 1 FALSE 1.14E-05 3.87E-05 0.936 -250 41599 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQIVCR [K].tQIVcR.[H] N-Term(TMT6plex); C5(Carbamidomethyl) 1 Q3TIV5 Zinc finger CCCH domain-containing protein 15 OS=Mus musculus OX=10090 GN=Zc3h15 PE=1 SV=2 Q3TIV5 Zinc finger CCCH domain-containing protein 15 OS=Mus musculus OX=10090 GN=Zc3h15 PE=1 SV=2 0 2 2 0.0854 0 1 1 1 503.28732 1005.56737 1005.57127 -3.88 -0.00195 0/0 0 0 12752474 HCD 30 MS2 41.6502 940 58.066 43.8346 11127 11127 11120 QEplus033719.raw F4 982.1 828 1009 710.2 1114.8 995.9 226 1.64 1 FALSE 0.009108 0.1656 -0.104 -250 41618 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYSESEK [R].sYSESEk.[Q] N-Term(TMT6plex); K7(TMT6plex) 1 Q9D211 CDKN2AIP N-terminal-like protein OS=Mus musculus OX=10090 GN=Cdkn2aipnl PE=3 SV=1 Q9D211 CDKN2AIP N-terminal-like protein OS=Mus musculus OX=10090 GN=Cdkn2aipnl PE=3 SV=1 0 2 2 0.5941 0 1 1 1 644.34509 1287.68291 1287.68327 -0.28 -0.00018 0/0 0 0 1895586.875 HCD 30 MS2 0 247.9 110 43.8396 11129 11129 11120 QEplus033719.raw F4 281 232.2 264.4 177.4 318.6 213.6 223 2.71 1 FALSE 0.003472 0.06731 0.095 -250 41624 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGDRGETGPAGPSGAPGPAGAR [K].sGDRGETGPAGPSGAPGPAGAR.[G] N-Term(TMT6plex) 7 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 1 3 3 0.7906 0 1 1 1 717.69678 2151.07578 2151.07402 0.82 0.00059 0/0 0 0 19700372 HCD 30 MS2 31.08163 303.8 110 43.8421 11130 11130 11120 QEplus033719.raw F4 279.6 333.9 395.7 176.3 298.5 338.6 244 8.31 1 FALSE 1.14E-05 6.31E-16 5.52 -250 41630 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVQAGNSDTEGGQPGRK [K].gVQAGNSDTEGGQPGRk.[R] N-Term(TMT6plex); K17(TMT6plex) 12 Q80TU6 MKIAA0670 protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1 Q7TSL7; Q9JIX8; B8JJ90; B8JJ91; B8JJ92; Q9JIX8-2; Q9JIX8-4; Q9JIX8-3; F6RJ39; Q52KR6; Q05D19; Q80TU6 Apoptotic chromatin condensation inducer 1 OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1; Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=3; Apoptotic chromatin condensation inducer in the nucleus (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=8; Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Isoform 2 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Isoform 4 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Isoform 3 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Apoptotic chromatin condensation inducer in the nucleus (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Acin1 protein OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Acin1 protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1; MKIAA0670 protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1 1 3 3 0.7454 0 1 1 1 706.04358 2116.11618 2116.11471 0.69 0.00049 0/0 0 0 18914272 HCD 30 MS2 0 429.4 110 43.8494 11132 11132 11131 QEplus033719.raw F4 429.4 437.3 480.5 277.3 545.4 406.4 352 6.01 1 FALSE 1.14E-05 6.31E-16 4.375 -250 41637 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGEGDRFQAHSK [R].eGEGDRFQAHSk.[L] N-Term(TMT6plex); K12(TMT6plex) 3 Q3ULW8 Protein mono-ADP-ribosyltransferase PARP3 OS=Mus musculus OX=10090 GN=Parp3 PE=2 SV=1 Q3ULW8-2; A0A5H1ZRP0; Q3ULW8 Isoform 2 of Protein mono-ADP-ribosyltransferase PARP3 OS=Mus musculus OX=10090 GN=Parp3; Poly [ADP-ribose] polymerase (Fragment) OS=Mus musculus OX=10090 GN=Parp3 PE=1 SV=1; Protein mono-ADP-ribosyltransferase PARP3 OS=Mus musculus OX=10090 GN=Parp3 PE=2 SV=1 1 4 4 0.6441 0 1 1 1 455.49329 1818.95131 1818.94988 0.79 0.00036 0/0 0 0 14060256 HCD 30 MS2 16.75653 727.7 107.527 43.8519 11133 11133 11131 QEplus033719.raw F4 840.4 428.5 778.9 727 719.8 871.3 302 4.44 1 FALSE 1.14E-05 1.26E-06 1.218 -250 41652 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YAEAVGR [K].yAEAVGR.[A] N-Term(TMT6plex) 1 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 0 2 2 0.498 0 1 1 1 497.78 994.55272 994.55191 0.81 0.00041 0/0 0 0 84812848 HCD 30 MS2 15.8412 681.2 15.54 43.8564 11135 11135 11131 QEplus033719.raw F4 845.4 490.8 658.6 660.2 733.6 698.7 134 2.51 1 FALSE 0.0006477 0.009916 0.406 -250 41661 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQLNETHSK [K].tQLNETHSk.[L] N-Term(TMT6plex); K9(TMT6plex) 34 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q6A0E9; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; MKIAA0004 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0004 PE=4 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 3 3 0.3576 0 1 1 1 505.95645 1515.8548 1515.85313 1.1 0.00056 0/0 0 0 16206844 HCD 30 MS2 25.85859 931.9 110 43.8611 11137 11137 11131 QEplus033719.raw F4 987.2 560 984.5 1071 813.6 1175.3 361 4.25 1 FALSE 1.14E-05 4.90E-07 1.296 -250 41683 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLEHAGYK [R].hLEHAGYk.[T] N-Term(TMT6plex); K8(TMT6plex) 3 Q545N8 Phosphomannomutase OS=Mus musculus OX=10090 GN=Pmm2 PE=1 SV=1 Q9DCE3; Q9D1M5; Q545N8 Phosphomannomutase OS=Mus musculus OX=10090 GN=Pmm2 PE=2 SV=1; Phosphomannomutase OS=Mus musculus OX=10090 GN=Pmm2 PE=2 SV=1; Phosphomannomutase OS=Mus musculus OX=10090 GN=Pmm2 PE=1 SV=1 0 4 4 0.5653 0 1 1 1 353.95694 1412.80593 1412.80505 0.62 0.00022 0/0 0 0 11371163 HCD 30 MS2 19.15343 430.7 76.362 43.8681 11140 11140 11131 QEplus033719.raw F4 473.5 349.7 459.9 350.4 493.7 457 313 3.29 1 FALSE 1.14E-05 0.0003496 0.753 -250 41690 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGDTYEYR [K].eGDTYEYR.[V] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.5254 0 1 1 1 631.29901 1261.59075 1261.58981 0.74 0.00047 0/0 0 0 10022884 HCD 30 MS2 0 519.6 110 43.8707 11141 11141 11131 QEplus033719.raw F4 565.2 187.8 446.8 951.4 275.6 690.9 33 2.95 2 FALSE 0.001744 0.02976 0.218 -250 41708 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTNYNMEHIR [K].hTNYNMEHIR.[V] N-Term(TMT6plex) 3 A1BN54; Q7TPR4 Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1;Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 Q99LJ3; A1BN54; Q7TPR4 Actn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Actn1 PE=2 SV=1; Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1; Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 0 4 4 0.7 0 1 1 1 386.69659 1543.76455 1543.76371 0.54 0.00021 0/0 0 0 22544438 HCD 30 MS2 14.03035 167.6 61.924 43.8849 11146 11146 11142 QEplus033719.raw F4 183.1 132.5 188.3 131.9 166.3 203.5 124 5 2 FALSE 1.14E-05 4.46E-08 1.494 -250 41712 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QELQEAQER [R].qELQEAQER.[L] N-Term(TMT6plex) 7 A0A6I8MX07 Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=1 A0A6I8MX07; Q921M4; Z4YJU8; E9PUQ5; Q5DTL1; Q921M4-2; A0A6I8MWY5 Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=1; Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=3; Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=3; Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=2; MKIAA4150 protein (Fragment) OS=Mus musculus OX=10090 GN=Golga2 PE=2 SV=1; Isoform 2 of Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2; Golgin subfamily A member 2 OS=Mus musculus OX=10090 GN=Golga2 PE=1 SV=1 0 2 2 0.5974 0 1 1 1 680.35602 1359.70476 1359.70657 -1.33 -0.00091 0/0 0 0 6586897 HCD 30 MS2 14.75199 314.8 110 43.8875 11147 11147 11142 QEplus033719.raw F4 297.5 288.4 338.4 247.4 388.2 328.7 215 3.8 1 FALSE 1.14E-05 9.73E-07 1.24 -250 41731 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASFNNPDR [R].aSFNNPDR.[A] N-Term(TMT6plex) 5 P54728 UV excision repair protein RAD23 homolog B OS=Mus musculus OX=10090 GN=Rad23b PE=1 SV=2 Q3TJ52; P54728; Q3U041; Q3UQN3; Q6NVC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rad23b PE=2 SV=1; UV excision repair protein RAD23 homolog B OS=Mus musculus OX=10090 GN=Rad23b PE=1 SV=2; UV excision repair protein RAD23 OS=Mus musculus OX=10090 GN=Rad23b PE=2 SV=1; UV excision repair protein RAD23 OS=Mus musculus OX=10090 GN=Rad23b PE=2 SV=1; UV excision repair protein RAD23 OS=Mus musculus OX=10090 GN=Rad23b PE=2 SV=1 0 2 2 0.5409 0 1 1 1 575.29694 1149.5866 1149.585 1.39 0.0008 0/0 0 0 10662143 HCD 30 MS2 27.60707 862.8 110 43.895 11150 11150 11142 QEplus033719.raw F4 883 835 974.3 669.6 868.5 946.5 173 2.81 1 FALSE 4.43E-05 0.001695 0.614 -250 41737 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGIPPQQQR [K].eGIPPQQQR.[L] N-Term(TMT6plex) 2 P29595 NEDD8 OS=Mus musculus OX=10090 GN=Nedd8 PE=1 SV=2 P29595; Q3TY05 NEDD8 OS=Mus musculus OX=10090 GN=Nedd8 PE=1 SV=2; NEDD8 (Fragment) OS=Mus musculus OX=10090 GN=Nedd8 PE=2 SV=1 0 2 2 0.4961 0 1 1 1 641.35907 1281.71086 1281.71126 -0.31 -0.0002 0/0 0 0 5139754 HCD 30 MS2 35.87297 286.1 110 43.8975 11151 11151 11142 QEplus033719.raw F4 288.2 250.8 310.7 242.7 323 301.4 358 2.56 1 FALSE 0.0008183 0.01132 0.383 -250 41740 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSECNMCNTPK [R].rSEcNMcNTPk.[Y] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl); K11(TMT6plex) 4 D3Z4U0 Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=2 E9PUD0; D3Z4U0; Q9R020-2; B2RRT9 Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=1; Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=2; Isoform 2 of Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2; Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=1 1 3 3 0.6609 0 1 1 1 618.9729 1854.90415 1854.90248 0.9 0.00056 0/0 0 0 4971917.5 HCD 30 MS2 13.70401 308.7 110 43.9 11152 11152 11142 QEplus033719.raw F4 335 282.6 343.1 230.7 348.5 312.2 121 4.07 1 FALSE 1.14E-05 2.17E-11 2.123 -250 41761 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATLEEAR [K].aTLEEAR.[R] N-Term(TMT6plex) 3 Q11011 Puromycin-sensitive aminopeptidase OS=Mus musculus OX=10090 GN=Npepps PE=1 SV=2 F6QYF8; Q11011; E9Q039 Aminopeptidase (Fragment) OS=Mus musculus OX=10090 GN=Npepps PE=1 SV=1; Puromycin-sensitive aminopeptidase OS=Mus musculus OX=10090 GN=Npepps PE=1 SV=2; Aminopeptidase OS=Mus musculus OX=10090 GN=Npepps PE=1 SV=1 0 2 2 0.422 0 1 1 1 509.7905 1018.57372 1018.57304 0.66 0.00034 0/0 0 0 56121156 HCD 30 MS2 9.810332 551.5 20.161 43.9121 11156 11156 11153 QEplus033719.raw F4 624.8 403 610.3 528 454.4 688.8 199 2.82 1 FALSE 0.0002909 0.005937 0.48 -250 41772 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GACGQGQEDPNSLR [R].gAcGQGQEDPNSLR.[H] N-Term(TMT6plex); C3(Carbamidomethyl) 1 Q9R118 Serine protease HTRA1 OS=Mus musculus OX=10090 GN=Htra1 PE=1 SV=2 Q9R118 Serine protease HTRA1 OS=Mus musculus OX=10090 GN=Htra1 PE=1 SV=2 0 2 2 0.6009 0 1 1 1 859.4093 1717.81133 1717.81251 -0.69 -0.00059 0/0 0 0 4367758.5 HCD 30 MS2 0 167 110 43.9191 11159 11159 11153 QEplus033719.raw F4 178.4 97.5 175.5 279.9 82.7 187.8 59 4.36 1 FALSE 1.14E-05 1.83E-12 2.327 -250 41801 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVQAGNSDTEGGQPGRK [K].gVQAGNSDTEGGQPGRk.[R] N-Term(TMT6plex); K17(TMT6plex) 12 Q80TU6 MKIAA0670 protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1 Q7TSL7; Q9JIX8; B8JJ90; B8JJ91; B8JJ92; Q9JIX8-2; Q9JIX8-4; Q9JIX8-3; F6RJ39; Q52KR6; Q05D19; Q80TU6 Apoptotic chromatin condensation inducer 1 OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1; Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=3; Apoptotic chromatin condensation inducer in the nucleus (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=8; Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Isoform 2 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Isoform 4 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Isoform 3 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Apoptotic chromatin condensation inducer in the nucleus (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Acin1 protein OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Acin1 protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1; MKIAA0670 protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1 1 4 4 0.6395 0 1 1 1 529.78412 2116.11464 2116.11471 -0.03 -0.00002 0/0 0 0 6539343 HCD 30 MS2 0 341.6 110 43.9286 11163 11163 11153 QEplus033719.raw F4 355 299 366.3 254 425.7 349.5 357 5.52 1 FALSE 1.14E-05 2.31E-10 1.928 -250 41808 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGIPPDQQR [K].eGIPPDQQR.[LV] N-Term(TMT6plex) 18 P62984; P62983 Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2;Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2 E9Q5F6; P62984; Q922Z8; Q922B0; Q3TH47; Q5SX22; E9Q4P0; P62983; Q78XY9; E9Q9J0; Q8R0Z9; B0LAC2; Q8C2K3; Q8VC46; A5JUZ1; A0A0A6YW67; E9QNP0; P0CG50 Polyubiquitin-C (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=1; Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Polyubiquitin-B (Fragment) OS=Mus musculus OX=10090 GN=Ubb PE=4 SV=2; KxDL motif-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2; Ubiquitin B OS=Mus musculus OX=10090 GN=Ubb PE=2 SV=1; 60S ribosomal protein L40 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=3 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiquitin A-52 residue ribosomal protein fusion product 1 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubb-ps PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiqutin subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Predicted pseudogene 8797 OS=Mus musculus OX=10090 GN=Gm8797 PE=4 SV=1; 60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Polyubiquitin-C OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=2 0 2 2 0.6712 0 1 1 1 634.84387 1268.68047 1268.67963 0.66 0.00042 0/0 0 0 55154648 HCD 30 MS2 5.149331 501.9 38.274 43.936 11165 11165 11164 QEplus033719.raw F4 486.2 422.2 544.4 389.8 609 559.7 291 2.92 2 FALSE 4.43E-05 0.001418 0.631 -250 41821 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATLEQTER [R].aTLEQTER.[SA] N-Term(TMT6plex) 8 Q5SX40; P13541; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q9ESW6; B2RWW8; Q5SX40; P13541; G3UW82; B2RWX0; Q3TT35; P13542 "Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.4781 0 1 1 1 588.82593 1176.64458 1176.64218 2.04 0.0012 0/0 0 0 2324266 HCD 30 MS2 60.66303 261.5 110 43.941 11167 11167 11164 QEplus033719.raw F4 286.3 137.7 264.1 350.3 196.3 334.5 288 3.2 3 FALSE 1.14E-05 0.0001039 0.854 -250 41831 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGDRGETGPAGPSGAPGPAGAR [K].sGDRGETGPAGPSGAPGPAGAR.[G] N-Term(TMT6plex) 7 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 1 2 2 0.7435 0 1 1 1 1076.04346 2151.07964 2151.07402 2.61 0.00281 0/0 0 0 3478858.25 HCD 30 MS2 0 14 110 43.9458 11169 11169 11164 QEplus033719.raw F4 12.6 13.9 16.8 7.6 13.5 19.5 247 3.82 1 FALSE 1.14E-05 1.04E-13 2.564 -250 41838 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDTEEISCR [R].eDTEEIScR.[T] N-Term(TMT6plex); C8(Carbamidomethyl) 2 B7ZWE5 B-cell leukemia/lymphoma 10 OS=Mus musculus OX=10090 GN=Bcl10 PE=1 SV=1 B7ZWE5; Q3THY9 B-cell leukemia/lymphoma 10 OS=Mus musculus OX=10090 GN=Bcl10 PE=1 SV=1; CARD domain-containing protein OS=Mus musculus OX=10090 GN=Bcl10 PE=2 SV=1 0 2 2 0.6326 0 1 1 1 684.31989 1367.63249 1367.63103 1.07 0.00073 0/0 0 0 2487321.25 HCD 30 MS2 0 110 110 43.9483 11170 11170 11164 QEplus033719.raw F4 112 107.5 121.1 75 137.2 107.1 38 3.13 1 FALSE 1.14E-05 3.55E-05 0.943 -250 41853 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YQCACNPGYHPTHDR [K].yQcAcNPGYHPTHDR.[L] N-Term(TMT6plex); C3(Carbamidomethyl); C5(Carbamidomethyl) 2 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 0 3 3 0.8155 0 1 1 1 702.315 2104.93045 2104.92789 1.22 0.00085 0/0 0 0 1331890.125 HCD 30 MS2 0 77 110 43.9533 11172 11172 11164 QEplus033719.raw F4 81.6 61.6 74.4 73.9 106.7 63.6 18 5.8 1 FALSE 1.14E-05 1.25E-09 1.789 -250 41866 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFQATAR [K].eFQATAR.[K] N-Term(TMT6plex) 4 P45952 "Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadm PE=1 SV=1" P45952; Q91WS8; Q3V2I9; D6RFD7 "Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadm PE=1 SV=1; Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadm PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Acadm PE=2 SV=1; Medium-chain-specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadm PE=1 SV=1" 0 2 2 0.5092 0 1 1 1 526.29071 1051.57414 1051.57337 0.73 0.00038 0/0 0 0 40032272 HCD 30 MS2 0 740.9 50.596 43.9702 11177 11177 11175 QEplus033719.raw F4 738.1 639.7 808.9 698.3 770.3 790.3 165 2.71 1 FALSE 0.0004793 0.007601 0.446 -250 41891 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDGDIR [K].vDGDIR.[D] N-Term(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; Q62319; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.3046 0 1 1 1 452.25861 903.50994 903.50971 0.25 0.00011 0/0 0 0 12816525 HCD 30 MS2 39.84929 938.5 96.459 43.977 11180 11180 11175 QEplus033719.raw F4 1117.7 410.8 767.9 1402.1 570.1 1362.6 169 1.97 2 FALSE 0.00726 0.1159 -0.033 -250 41897 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RCVMDDDNEVRDR [K].rcVMDDDNEVRDR.[A] N-Term(TMT6plex); C2(Carbamidomethyl) 1 Q9QZE5 Coatomer subunit gamma-1 OS=Mus musculus OX=10090 GN=Copg1 PE=1 SV=1 Q9QZE5 Coatomer subunit gamma-1 OS=Mus musculus OX=10090 GN=Copg1 PE=1 SV=1 2 4 4 0.6339 0 1 1 1 477.97629 1908.88332 1908.88536 -1.07 -0.00051 0/0 0 0 8965734 HCD 30 MS2 20.35045 414.1 110 43.9794 11181 11181 11175 QEplus033719.raw F4 475.7 320.4 420.7 329.2 482.2 456.2 44 4.89 1 FALSE 1.14E-05 6.55E-09 1.652 -250 41903 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEDCLTSQTR [K].gEDcLTSQTR.[L] N-Term(TMT6plex); C4(Carbamidomethyl) 1 Q9DC23 DnaJ homolog subfamily C member 10 OS=Mus musculus OX=10090 GN=Dnajc10 PE=1 SV=2 Q9DC23 DnaJ homolog subfamily C member 10 OS=Mus musculus OX=10090 GN=Dnajc10 PE=1 SV=2 0 2 2 0.7091 0 1 1 1 698.34009 1395.6729 1395.67356 -0.47 -0.00033 0/0 0 0 2928192.75 HCD 30 MS2 24.8946 209.2 110 43.9867 11184 11184 11175 QEplus033719.raw F4 218.7 205.6 222.9 163.5 268.5 175.9 76 3.61 1 FALSE 1.14E-05 4.03E-07 1.312 -250 41907 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLYEAAHR [R].qLYEAAHR.[V] N-Term(TMT6plex) 2 Q8R3F5 "Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Mus musculus OX=10090 GN=Mcat PE=1 SV=3" Q8R3F5; A0A2R8VHT7 "Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Mus musculus OX=10090 GN=Mcat PE=1 SV=3; Malonyl-CoA-acyl carrier protein transacylase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Mcat PE=1 SV=1" 0 3 3 0.5016 0 1 1 1 406.22681 1216.66587 1216.66359 1.87 0.00076 0/0 0 0 6431720.5 HCD 30 MS2 51.36548 478.3 110 43.9962 11187 11187 11186 QEplus033719.raw F4 757.6 293.6 499.9 367.2 405.9 545.6 338 3.07 1 FALSE 1.14E-05 0.0009095 0.671 -250 41916 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGDRGETGPAGPSGAPGPAGAR [K].sGDRGETGPAGPSGAPGPAGAR.[G] N-Term(TMT6plex) 7 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 1 4 4 0.7363 0 1 1 1 538.52435 2151.07558 2151.07402 0.73 0.00039 0/0 0 0 7825278 HCD 30 MS2 31.30743 363.5 110 43.9987 11188 11188 11186 QEplus033719.raw F4 369.1 304.3 430.1 285.8 406.1 385.9 239 4.55 1 FALSE 1.14E-05 3.38E-10 1.897 -250 41932 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLAEEDAAR [R].qLAEEDAAR.[Q] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.6841 0 1 1 1 616.32776 1231.64824 1231.648 0.2 0.00012 0/0 0 0 20162804 HCD 30 MS2 12.65445 743.4 99.135 44.0033 11190 11190 11186 QEplus033719.raw F4 795 634.5 794.3 645 806.5 785.2 218 3.45 2 FALSE 1.14E-05 9.92E-07 1.238 -250 41937 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSECNMCNTPK [R].rSEcNMcNTPk.[Y] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl); K11(TMT6plex) 4 D3Z4U0 Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=2 E9PUD0; D3Z4U0; Q9R020-2; B2RRT9 Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=1; Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=2; Isoform 2 of Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2; Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=1 1 3 3 0.6998 0 1 1 1 618.97314 1854.90488 1854.90248 1.29 0.0008 0/0 0 0 7295274 HCD 30 MS2 4.464137 382.2 110 44.0058 11191 11191 11186 QEplus033719.raw F4 405.5 351 418.4 277 437.7 403.5 124 5.23 1 FALSE 1.14E-05 1.68E-12 2.334 -250 41949 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRPFNSR [R].vRPFNSR.[E] N-Term(TMT6plex) 18 A0A5F8MPF0 Kinesin-like protein KIF1B OS=Mus musculus OX=10090 GN=Kif1b PE=1 SV=1 A0A5F8MPF0; Q6TA13; Q3UH16; A0A087WSU7; A2AH75; Q3UUN4; Q6P5H4; P33173; Q60575; E9Q9G6; Q3UY61; Q05BP4; E9QAN4; G3UW47; A0A087WQE8; Q60575-3; Q60575-2; Q05BI6 Kinesin-like protein KIF1B OS=Mus musculus OX=10090 GN=Kif1b PE=1 SV=1; Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Kif1a PE=2 SV=1; Kinesin-like protein KIF1A (Fragment) OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=1; Kinesin-like protein KIF1B OS=Mus musculus OX=10090 GN=Kif1b PE=1 SV=1; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif1a PE=2 SV=1; Kif1a protein OS=Mus musculus OX=10090 GN=Kif1a PE=2 SV=1; Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=2; Kinesin-like protein KIF1B OS=Mus musculus OX=10090 GN=Kif1b PE=1 SV=2; Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=1; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif1b PE=2 SV=1; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif1a PE=2 SV=1; Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=1; Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=1; Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=1; Isoform 3 of Kinesin-like protein KIF1B OS=Mus musculus OX=10090 GN=Kif1b; Isoform 2 of Kinesin-like protein KIF1B OS=Mus musculus OX=10090 GN=Kif1b; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif1a PE=2 SV=1 0 3 3 0.2905 0 1 1 1 368.88831 1104.65036 1104.64754 2.55 0.00094 0/0 0 0 4098424.5 HCD 30 MS2 64.82917 478.1 110 44.0108 11193 11193 11186 QEplus033719.raw F4 578.8 337.2 500.8 386.7 544.3 520.7 175 2.41 1 FALSE 0.001266 0.01737 0.306 -250 41958 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEVSSNPQR [K].vEVSSNPQR.[A] N-Term(TMT6plex) 3 A9C491 Cullin 7 OS=Mus musculus OX=10090 GN=Cul7 PE=2 SV=1 A9C491; F6Q1R4; Q8VE73-3 Cullin 7 OS=Mus musculus OX=10090 GN=Cul7 PE=2 SV=1; Cullin-7 (Fragment) OS=Mus musculus OX=10090 GN=Cul7 PE=1 SV=1; Isoform 2 of Cullin-7 OS=Mus musculus OX=10090 GN=Cul7 0 2 2 0.5889 0 1 1 1 622.84497 1244.68266 1244.67963 2.44 0.00152 0/0 0 0 3805504 HCD 30 MS2 29.59422 365.9 110 44.0133 11194 11194 11186 QEplus033719.raw F4 388.3 290.2 404.8 341 333.9 437.1 295 2.7 1 FALSE 1.14E-05 0.0001215 0.841 -250 41971 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KSNPVVR [K].kSNPVVR.[T] N-Term(TMT6plex); K1(TMT6plex) 4 Q9DCN2 NADH-cytochrome b5 reductase 3 OS=Mus musculus OX=10090 GN=Cyb5r3 PE=1 SV=3 Q9DCN2-2; Q9DCN2; Q9CY59; F2Z456 Isoform 2 of NADH-cytochrome b5 reductase 3 OS=Mus musculus OX=10090 GN=Cyb5r3; NADH-cytochrome b5 reductase 3 OS=Mus musculus OX=10090 GN=Cyb5r3 PE=1 SV=3; NADH-cytochrome b5 reductase OS=Mus musculus OX=10090 GN=Cyb5r3 PE=2 SV=1; NADH-cytochrome b5 reductase OS=Mus musculus OX=10090 GN=Cyb5r3 PE=1 SV=1 1 3 3 0.4597 0 1 1 1 419.93958 1257.80417 1257.80433 -0.12 -0.00005 0/0 0 0 8405587 HCD 30 MS2 52.76315 736.5 110 44.0181 11196 11196 11186 QEplus033719.raw F4 779.6 519.6 779.7 979.4 690.6 670.2 241 2.11 1 FALSE 0.001762 0.03005 0.216 -250 41991 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEMQEVQSSR [R].qEMQEVQSSR.[S] N-Term(TMT6plex) 5 O88569 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2 O88569-3; B7ZP22; O88569; A0A0N4SUM2; O88569-2 Isoform 3 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2; Heterogeneous nuclear ribonucleoproteins A2/B1 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 0 2 2 0.7382 0 1 1 1 725.86115 1450.71501 1450.71576 -0.51 -0.00037 0/0 0 0 8697261 HCD 30 MS2 35.80802 524.3 110 44.0304 11200 11200 11197 QEplus033719.raw F4 518.1 460.3 526.5 423.4 711.3 506.5 129 3.4 1 FALSE 1.14E-05 5.71E-05 0.903 -250 42019 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THFGGGK [R].tHFGGGk.[T] N-Term(TMT6plex); K7(TMT6plex) 10 Q9D7P1 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24 PE=2 SV=1 Q3TIF8; Q9D7P1; P62849-3; Q9DCA4; Q5M9M7; A0A286YEB7; Q9CQK2; Q9CY61; P62849-2; Q3UTE1 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24 PE=2 SV=1; 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24 PE=2 SV=1; Isoform 3 of 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24; 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24 PE=2 SV=1; 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24 PE=2 SV=1; 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24 PE=1 SV=1; 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24 PE=2 SV=1; 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24 PE=2 SV=1; Isoform 2 of 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24; 40S ribosomal protein S24 (Fragment) OS=Mus musculus OX=10090 GN=Gm4832 PE=2 SV=1 0 2 2 0.576 0 1 1 1 581.34241 1161.67754 1161.67806 -0.45 -0.00026 0/0 0 0 3554729 HCD 30 MS2 72.05484 630.2 110 44.0402 11204 11204 11197 QEplus033719.raw F4 1056 397.6 643.4 588 453.5 642.8 432 2.83 1 FALSE 0.0001603 0.003508 0.542 -250 42039 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HFDETVNR [R].hFDETVNR.[Y] N-Term(TMT6plex) 4 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q99LY0; Q91YQ5; Q5RKP4; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 0 2 2 0.584 0 1 1 1 623.82251 1246.63774 1246.63777 -0.02 -0.00001 0/0 0 0 5545266.5 HCD 30 MS2 26.55494 599.2 110 44.0477 11207 11207 11197 QEplus033719.raw F4 617.7 495.6 685 486.5 633.4 677 160 2.38 1 FALSE 1.14E-05 0.0004985 0.722 -250 42046 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGAPGPAGAR [R].vGAPGPAGAR.[G] N-Term(TMT6plex) 3 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.4435 0 1 1 1 541.31952 1081.63176 1081.63156 0.19 0.0001 0/0 0 0 2716382 HCD 30 MS2 20.6077 507.3 110 44.055 11209 11209 11208 QEplus033719.raw F4 522.8 453.8 562 334.5 653.3 517.3 88 2.39 1 FALSE 0.001559 0.02349 0.254 -250 42063 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HFDETVNR [R].hFDETVNR.[Y] N-Term(TMT6plex) 4 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q99LY0; Q91YQ5; Q5RKP4; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 0 3 3 0.6333 0 1 1 1 416.21719 1246.63703 1246.63777 -0.59 -0.00025 0/0 0 0 51745760 HCD 30 MS2 54.12355 377.3 14.384 44.0598 11211 11211 11208 QEplus033719.raw F4 380.1 242.9 350.5 461.1 370.1 458.9 157 3.3 1 FALSE 1.14E-05 0.0005511 0.714 -250 42077 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQDVTQR [K].vQDVTQR.[G] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.4653 0 1 1 1 537.8089 1074.61052 1074.61049 0.03 0.00002 0/0 0 0 28290904 HCD 30 MS2 26.28789 869.2 61.22 44.0643 11213 11213 11208 QEplus033719.raw F4 1036.4 546.9 928.9 839.8 734.8 1128.1 262 2.88 1 FALSE 0.0001813 0.003985 0.528 -250 42085 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNAQTAVR [R].vNAQTAVR.[S] N-Term(TMT6plex) 3 Q3UQS9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1 O55124; Q3UQS9; Q14BI5 M-protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1; Myomesin 2 OS=Mus musculus OX=10090 GN=Myom2 PE=1 SV=1 0 2 2 0.4775 0 1 1 1 544.32507 1087.64287 1087.64212 0.69 0.00037 0/0 0 0 26246162 HCD 30 MS2 12.81844 679 68.431 44.0666 11214 11214 11208 QEplus033719.raw F4 821.7 174 463.6 1323.8 232.7 1058.2 257 2.89 1 FALSE 1.14E-05 0.0002169 0.793 -250 42096 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGGPNYQEGLR [R].rGGPNYQEGLR.[V] N-Term(TMT6plex) 5 Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1;ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TS02; Q3TED3; Q3UEA1; Q3V117; Q91V92 ATP citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate (pro-S-)-lyase (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 1 3 3 0.6252 0 1 1 1 492.6019 1475.79114 1475.79164 -0.34 -0.00017 0/0 0 0 15427655 HCD 30 MS2 13.13287 537.6 110 44.0713 11216 11216 11208 QEplus033719.raw F4 671.6 424.7 591 352.9 584.3 601.3 316 5.55 2 FALSE 1.14E-05 1.06E-09 1.803 -250 42110 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTYTAHPK [K].tTYTAHPk.[A] N-Term(TMT6plex); K8(TMT6plex) 4 Q99LI8 Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=2 Q99LI8; Q3UMA3; Q3TLL4; F6VV02 Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=2; Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=1; Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=2 SV=1; Hepatocyte growth factor-regulated tyrosine kinase substrate (Fragment) OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=2 0 3 3 0.4262 0 1 1 1 459.60358 1376.79618 1376.79382 1.71 0.00079 0/0 0 0 9267809 HCD 30 MS2 76.22305 818.6 78.579 44.0758 11218 11218 11208 QEplus033719.raw F4 861.2 548.4 901.1 895.6 741 964.3 526 2.44 1 FALSE 0.0004191 0.007461 0.449 -250 42117 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QMEVAQANR [R].qMEVAQANR.[H] N-Term(TMT6plex) 8 E9Q586 Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1 E9Q3M3; E9Q586; O08788-2; D3YX34; Q3T9V8; O08788; Q6NZM3; Q3TB96 Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Isoform 2 of Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=3; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1 0 2 2 0.6873 0 1 1 1 638.33679 1275.66631 1275.66769 -1.08 -0.00069 0/0 0 0 9862718 HCD 30 MS2 16.78646 548.7 110 44.0832 11220 11220 11219 QEplus033719.raw F4 593.4 445.7 571.1 477.4 626.3 578.6 225 3.55 1 FALSE 1.14E-05 1.53E-05 1.013 -250 42127 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THFGGGK [R].tHFGGGk.[T] N-Term(TMT6plex); K7(TMT6plex) 10 Q9D7P1 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24 PE=2 SV=1 Q3TIF8; Q9D7P1; P62849-3; Q9DCA4; Q5M9M7; A0A286YEB7; Q9CQK2; Q9CY61; P62849-2; Q3UTE1 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24 PE=2 SV=1; 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24 PE=2 SV=1; Isoform 3 of 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24; 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24 PE=2 SV=1; 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24 PE=2 SV=1; 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24 PE=1 SV=1; 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24 PE=2 SV=1; 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24 PE=2 SV=1; Isoform 2 of 40S ribosomal protein S24 OS=Mus musculus OX=10090 GN=Rps24; 40S ribosomal protein S24 (Fragment) OS=Mus musculus OX=10090 GN=Gm4832 PE=2 SV=1 0 3 3 0.7071 0 1 1 1 387.89746 1161.67783 1161.67806 -0.2 -0.00008 0/0 0 0 56375264 HCD 30 MS2 12.36353 487.7 19.684 44.0879 11222 11222 11219 QEplus033719.raw F4 1019.1 229.4 501.5 453.7 247.5 475.2 432 2.97 1 FALSE 1.14E-05 0.000236 0.786 -250 42130 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEEVYR [R].eAEEVYR.[N] N-Term(TMT6plex) 8 Q3UZ17 Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1 E9Q715; Q05CX5; Q7TNC4-2; Q3U5L2; Q7TNC4-3; Q3UZ17; Q7TNC4; Q3UGK2 Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2 PE=1 SV=1; Luc7l2 protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=1 SV=1; Isoform 2 of Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1; Isoform 3 of Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1; Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1 0 2 2 0.612 0 1 1 1 562.79327 1124.57927 1124.57852 0.67 0.00038 0/0 0 0 23882306 HCD 30 MS2 4.64892 854.7 110 44.0904 11223 11223 11219 QEplus033719.raw F4 843.4 846.7 966.4 648.1 935 888.3 132 2.5 1 FALSE 0.0005076 0.007855 0.442 -250 42134 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPTNLANR [R].sPTNLANR.[Q] N-Term(TMT6plex) 5 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; E9PZ16; Q52KG8; Q5RKM8; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Hspg2 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Hspg2 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.289 0 1 1 1 551.31451 1101.62175 1101.62139 0.33 0.00018 0/0 0 0 19948118 HCD 30 MS2 4.450392 590.6 88.116 44.0927 11224 11224 11219 QEplus033719.raw F4 623.4 488.9 744.4 667.6 386.1 633.3 262 2.63 2 FALSE 0.0004888 0.007766 0.443 -250 42143 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVCDEVR [R].eVcDEVR.[A] N-Term(TMT6plex); C3(Carbamidomethyl) 2 Q9CZN7 "Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" Q9CZN7-2; Q9CZN7 "Isoform 2 of Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2; Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" 0 2 2 0.446 0 1 1 1 568.28436 1135.56145 1135.56149 -0.04 -0.00002 0/0 0 0 12448123 HCD 30 MS2 17.93877 701.4 110 44.0952 11225 11225 11219 QEplus033719.raw F4 759.3 621.2 758.7 648.9 643.8 776.7 100 2.87 1 FALSE 0.0002909 0.006036 0.478 -250 42147 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDLYSSGR [R].sDLYSSGR.[D] N-Term(TMT6plex) 4 Q9WV02; Q91VM5 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1;RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" A0A2I3BRL8; Q9WV02; Q91VM5; S4R1F6 "Predicted gene 7324 OS=Mus musculus OX=10090 GN=Gm7324 PE=4 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1" 0 2 2 0.3759 0 1 1 1 557.29016 1113.57305 1113.57377 -0.65 -0.00036 0/0 0 0 11557766 HCD 30 MS2 0 641 110 44.0977 11226 11226 11219 QEplus033719.raw F4 676.3 628.6 715.5 449.2 797.6 578.7 79 2.82 2 FALSE 1.14E-05 0.0004704 0.727 -250 42156 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESPNITDR [R].eSPNITDR.[W] N-Term(TMT6plex) 1 Q8BU30 "Isoleucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Iars1 PE=1 SV=2" Q8BU30 "Isoleucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Iars1 PE=1 SV=2" 0 2 2 0.4495 0 1 1 1 580.80902 1160.61077 1160.61088 -0.1 -0.00006 0/0 0 0 10293082 HCD 30 MS2 42.02527 903.3 110 44.1002 11227 11227 11219 QEplus033719.raw F4 1171.9 677.9 894.6 825.9 855.4 994 199 2.87 1 FALSE 0.0003496 0.006928 0.459 -250 42164 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEMQEVQSSR [R].qEMQEVQSSR.[S] N-Term(TMT6plex) 5 O88569 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2 O88569-3; B7ZP22; O88569; A0A0N4SUM2; O88569-2 Isoform 3 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2; Heterogeneous nuclear ribonucleoproteins A2/B1 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 0 3 3 0.6542 0 1 1 1 484.24313 1450.71485 1450.71576 -0.63 -0.0003 0/0 0 0 9646872 HCD 30 MS2 56.25303 1001.8 101.201 44.1025 11228 11228 11219 QEplus033719.raw F4 1021.4 883.7 1084.4 762.4 1298 960.8 128 4.28 1 FALSE 2.26E-05 0.001089 0.655 -250 42173 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LNHANVVR [K].lNHANVVR.[L] N-Term(TMT6plex) 1 Q8BKG3 Inactive tyrosine-protein kinase 7 OS=Mus musculus OX=10090 GN=Ptk7 PE=1 SV=1 Q8BKG3 Inactive tyrosine-protein kinase 7 OS=Mus musculus OX=10090 GN=Ptk7 PE=1 SV=1 0 3 3 0.3255 0 1 1 1 384.56647 1151.68485 1151.68466 0.17 0.00006 0/0 0 0 9270121 HCD 30 MS2 55.52062 490.6 64.292 44.1048 11229 11229 11219 QEplus033719.raw F4 467.3 377.2 557.8 417.8 449.7 674.1 225 2.98 1 FALSE 0.00079 0.01089 0.39 -250 42183 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TREEIQEVR [R].tREEIQEVR.[S] N-Term(TMT6plex) 1 Q3UFJ3 Pyruvate dehydrogenase E1 component subunit alpha OS=Mus musculus OX=10090 GN=Pdha1 PE=1 SV=1 Q3UFJ3 Pyruvate dehydrogenase E1 component subunit alpha OS=Mus musculus OX=10090 GN=Pdha1 PE=1 SV=1 1 2 2 0.3933 0 1 1 1 694.88867 1388.77007 1388.76951 0.4 0.00028 0/0 0 0 8105415 HCD 30 MS2 8.702151 138.9 110 44.1121 11231 11231 11230 QEplus033719.raw F4 154.2 88.6 152.3 178.4 105.5 154.3 355 2.67 1 FALSE 1.14E-05 0.0009381 0.668 -250 42190 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TADGSLQSASSEGSR [R].tADGSLQSASSEGSR.[L] N-Term(TMT6plex) 10 Q6AXB7 Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1 PE=1 SV=1 P35922-8; Q6AXB7; E9QAT0; P35922-7; P35922-2; P35922-9; Q547R0; P35922; E9QNF5; D3Z6U8 Isoform 8 of Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1; Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1 PE=1 SV=1; Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1 PE=1 SV=1; Isoform 7 of Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1; Isoform 2 of Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1; Isoform 9 of Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1; Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1 PE=2 SV=1; Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1 PE=1 SV=1; Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1 PE=1 SV=1; Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1 PE=1 SV=1 0 2 2 0.7767 0 1 1 1 841.41357 1681.81987 1681.81904 0.5 0.00042 0/0 0 0 6992386 HCD 30 MS2 0 179.9 110 44.1146 11232 11232 11230 QEplus033719.raw F4 183.3 205.3 188.8 93.1 260.5 148.2 134 4.21 1 FALSE 1.14E-05 3.10E-15 2.853 -250 42199 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQQMLAR [R].gQQMLAR.[C] N-Term(TMT6plex) 9 S4R1P5 Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=1 Q91ZU6-3; Q91ZU6-4; Q91ZU6-2; A0A1D5RLZ3; S4R1Y6; E9Q9X1; A0A087WSP0; Q91ZU6; S4R1P5 Isoform 3 of Dystonin OS=Mus musculus OX=10090 GN=Dst; Isoform 4 of Dystonin OS=Mus musculus OX=10090 GN=Dst; Isoform 1 of Dystonin OS=Mus musculus OX=10090 GN=Dst; Dystonin (Fragment) OS=Mus musculus OX=10090 GN=Dst PE=1 SV=1; Dystonin (Fragment) OS=Mus musculus OX=10090 GN=Dst PE=1 SV=2; Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=2; Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=1; Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=2; Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=1 0 2 2 0.0962 0 1 1 1 516.79547 1032.58367 1032.58217 1.45 0.00075 0/0 0 0 6414804 HCD 30 MS2 42.84094 652.5 110 44.1171 11233 11233 11230 QEplus033719.raw F4 714.5 480.4 663.3 626.6 670.6 759.8 307 1.56 1 FALSE 0.0003496 0.00671 0.464 -250 42208 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FLHQER [KR].fLHQER.[M] N-Term(TMT6plex) 13 A0A2I3BQZ9 Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App PE=1 SV=1 A0A2I3BQZ9; A0A2I3BR03; A0A2I3BPT1; A0A0R4IZZ1; Q3TWF3; Q3U311; P12023-2; Q03157; P12023; Q3TUB1; Q53ZT3; Q3TVS1; P12023-3 Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App PE=1 SV=1; Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App PE=1 SV=1; Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App PE=1 SV=1; Amyloid-like protein 1 OS=Mus musculus OX=10090 GN=Aplp1 PE=1 SV=1; Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Aplp1 PE=2 SV=1; Isoform APP695 of Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App; Amyloid-like protein 1 OS=Mus musculus OX=10090 GN=Aplp1 PE=1 SV=1; Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Aplp1 PE=2 SV=1; Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App PE=2 SV=1; Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App PE=2 SV=1; Isoform APP751 of Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App 0 3 3 0.5581 0 1 1 1 353.53604 1058.59357 1058.59444 -0.83 -0.00029 0/0 0 0 5629548.5 HCD 30 MS2 57.66375 509.2 110 44.1196 11234 11234 11230 QEplus033719.raw F4 771 398 495.9 382.8 484 523.3 171 2.67 1 FALSE 0.002249 0.04399 0.161 -250 42226 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGDVEGSQSQDEGEGSGESER [K].kGDVEGSQSQDEGEGSGESER.[G] N-Term(TMT6plex); K1(TMT6plex) 4 Q9CW03 Structural maintenance of chromosomes protein 3 OS=Mus musculus OX=10090 GN=Smc3 PE=1 SV=2 Q6PIE1; Q6PFZ4; Q9CW03; Q6P5E5 Structural maintenance of chromosomes protein 1A (Fragment) OS=Mus musculus OX=10090 GN=Smc3 PE=2 SV=1; Smc3 protein OS=Mus musculus OX=10090 GN=Smc3 PE=2 SV=1; Structural maintenance of chromosomes protein 3 OS=Mus musculus OX=10090 GN=Smc3 PE=1 SV=2; Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc3 PE=2 SV=1 1 3 3 0.8965 0 1 1 1 875.74786 2625.22904 2625.22763 0.54 0.00047 0/0 0 0 3285757.25 HCD 30 MS2 0 101.8 110 44.1271 11237 11237 11230 QEplus033719.raw F4 99 116.2 110.2 68.1 134.6 82.8 106 8.02 1 FALSE 1.14E-05 6.31E-16 5.02 -250 42232 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEPGPPGPAGER [K].gEPGPPGPAGER.[G] N-Term(TMT6plex) 1 Q8K4Q8 Collectin-12 OS=Mus musculus OX=10090 GN=Colec12 PE=1 SV=1 Q8K4Q8 Collectin-12 OS=Mus musculus OX=10090 GN=Colec12 PE=1 SV=1 0 2 2 0.6529 0 1 1 1 675.35437 1349.70146 1349.70109 0.27 0.00018 0/0 0 0 5297004 HCD 30 MS2 0 221.3 110 44.1296 11238 11238 11230 QEplus033719.raw F4 208.9 265.8 309.9 188.1 175 180 243 3.63 1 FALSE 1.14E-05 4.40E-06 1.115 -250 42251 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESGSDGSTAESQPAEK [K].eSGSDGSTAESQPAEk.[Q] N-Term(TMT6plex); K16(TMT6plex) 1 Q8R2M2 Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Mus musculus OX=10090 GN=Dnttip2 PE=1 SV=1 Q8R2M2 Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Mus musculus OX=10090 GN=Dnttip2 PE=1 SV=1 0 3 3 0.7527 0 1 1 1 680.0058 2038.00284 2037.99768 2.53 0.00172 0/0 0 0 3533305.75 HCD 30 MS2 16.46573 187.2 110 44.142 11242 11242 11241 QEplus033719.raw F4 181.5 173.1 207.7 141.4 236.8 182.8 191 4.61 1 FALSE 1.14E-05 8.48E-12 2.2 -250 42260 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGSQGELTPANSQSR [R].eGSQGELTPANSQSR.[M] N-Term(TMT6plex) 4 Q99LD4 COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1 Q99LD4; G3UXW9; A0A140LJB7; Q3MIA8 COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1; COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1; COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1; COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1 0 2 2 0.6547 0 1 1 1 895.44824 1789.88921 1789.88778 0.79 0.00071 0/0 0 0 2997440.5 HCD 30 MS2 0 110.1 110 44.1445 11243 11243 11241 QEplus033719.raw F4 110 83.1 123.9 106.5 114 123.3 174 4.75 1 FALSE 1.14E-05 6.31E-16 3.117 -250 42268 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTISNR [K].vTISNR.[L] N-Term(TMT6plex) 3 Q71LX8 Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q811H6; Q80YC2; Q71LX8 Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 0 2 2 0.1853 0 1 1 1 459.78293 918.55858 918.557 1.72 0.00079 0/0 0 0 38585616 HCD 30 MS2 29.05181 734.1 26.63 44.1468 11244 11244 11241 QEplus033719.raw F4 759.4 568.4 826.5 671 719.9 859.2 68 2.32 1 FALSE 0.003708 0.07096 0.085 -250 42278 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HCNGVDWR [R].hcNGVDWR.[Q] N-Term(TMT6plex); C2(Carbamidomethyl) 1 O70194 Eukaryotic translation initiation factor 3 subunit D OS=Mus musculus OX=10090 GN=Eif3d PE=1 SV=2 O70194 Eukaryotic translation initiation factor 3 subunit D OS=Mus musculus OX=10090 GN=Eif3d PE=1 SV=2 0 3 3 0.6199 0 1 1 1 424.87546 1272.61182 1272.61051 1.03 0.00044 0/0 0 0 16341033 HCD 30 MS2 47.93872 552 55.738 44.1491 11245 11245 11241 QEplus033719.raw F4 869.5 280.1 453.5 646.8 433.6 628.4 54 3.21 1 FALSE 4.43E-05 0.001528 0.624 -250 42288 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THYQADIER [K].tHYQADIER.[M] N-Term(TMT6plex) 2 Q9CZW4 Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=2 E9PUC2; Q9CZW4 Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=1; Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=2 0 3 3 0.574 0 1 1 1 454.57239 1361.70261 1361.70109 1.11 0.00051 0/0 0 0 16202207 HCD 30 MS2 44.41233 480.5 60.519 44.1513 11246 11246 11241 QEplus033719.raw F4 553.8 373.6 527.3 457.8 471.9 498.6 200 3.31 1 FALSE 1.14E-05 0.0001125 0.847 -250 42295 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AADGNYYNAR [R].aADGNYYNAR.[K] N-Term(TMT6plex) 4 E9QMK9 "D-glutamate cyclase, mitochondrial OS=Mus musculus OX=10090 GN=Dglucy PE=1 SV=1" E9QMK9; Q8BH86-2; Q3U7K4; Q8BH86 "D-glutamate cyclase, mitochondrial OS=Mus musculus OX=10090 GN=Dglucy PE=1 SV=1; Isoform 2 of D-glutamate cyclase, mitochondrial OS=Mus musculus OX=10090 GN=Dglucy; DUF4392 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dglucy PE=2 SV=1; D-glutamate cyclase, mitochondrial OS=Mus musculus OX=10090 GN=Dglucy PE=1 SV=1" 0 2 2 0.7864 0 1 1 1 672.33191 1343.65654 1343.65414 1.78 0.0012 0/0 0 0 6365552.5 HCD 30 MS2 0 294.7 110 44.1538 11247 11247 11241 QEplus033719.raw F4 267.8 289.9 372.7 271.3 267.3 299.4 91 3.23 1 FALSE 1.14E-05 0.0003211 0.76 -250 42299 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MPTETER [-].mPTETER.[C] N-Term(TMT6plex) 1 P50543 Protein S100-A11 OS=Mus musculus OX=10090 GN=S100a11 PE=1 SV=1 P50543 Protein S100-A11 OS=Mus musculus OX=10090 GN=S100a11 PE=1 SV=1 0 2 2 0.2361 0 1 1 1 546.78369 1092.56011 1092.55568 4.06 0.00222 0/0 0 0 3382571.5 HCD 30 MS2 78.39395 732.3 110 44.1563 11248 11248 11241 QEplus033719.raw F4 1018.9 572.1 731.2 472.3 827.6 771.5 159 2.33 1 FALSE 0.00557 0.09389 0.023 -250 42308 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGGPNYQEGLR [R].rGGPNYQEGLR.[V] N-Term(TMT6plex) 5 Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1;ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TS02; Q3TED3; Q3UEA1; Q3V117; Q91V92 ATP citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate (pro-S-)-lyase (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 1 2 2 0.6498 0 1 1 1 738.40002 1475.79277 1475.79164 0.77 0.00057 0/0 0 0 2853070.5 HCD 30 MS2 0 96.8 110 44.1588 11249 11249 11241 QEplus033719.raw F4 97.6 89.7 104.8 65 136.5 87.4 328 3.17 2 FALSE 1.14E-05 2.84E-08 1.531 -250 42358 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVTADR [R].iVTADR.[A] N-Term(TMT6plex) 2 Q9QYS9 Protein quaking OS=Mus musculus OX=10090 GN=Qki PE=1 SV=1 Q9QYS9; Q9QYS9-7 Protein quaking OS=Mus musculus OX=10090 GN=Qki PE=1 SV=1; Isoform 7 of Protein quaking OS=Mus musculus OX=10090 GN=Qki 0 2 2 0.1648 0 1 1 1 452.27722 903.54717 903.5461 1.18 0.00053 0/0 0 0 16397911 HCD 30 MS2 45.83759 859.3 76.4 44.1819 11258 11258 11252 QEplus033719.raw F4 922 631.7 814.5 886.1 901.4 1000 164 1.82 1 FALSE 0.002732 0.0541 0.13 -250 42368 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYFGGTEDR [R].rYFGGTEDR.[L] N-Term(TMT6plex) 1 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 1 3 3 0.5591 0 1 1 1 443.89706 1329.67664 1329.67488 1.32 0.00059 0/0 0 0 11630906 HCD 30 MS2 36.96439 656.5 110 44.1844 11259 11259 11252 QEplus033719.raw F4 671.8 590.7 717 495.8 776.7 687.1 137 3.72 1 FALSE 0.0004392 0.007518 0.448 -250 42376 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRYTTPAGEVR [R].sRYTTPAGEVR.[Y] N-Term(TMT6plex) 4 Q11011 Puromycin-sensitive aminopeptidase OS=Mus musculus OX=10090 GN=Npepps PE=1 SV=2 E9Q6F4; F6QYF8; Q11011; E9Q039 Puromycin-sensitive aminopeptidase OS=Mus musculus OX=10090 GN=Npepps PE=1 SV=1; Aminopeptidase (Fragment) OS=Mus musculus OX=10090 GN=Npepps PE=1 SV=1; Puromycin-sensitive aminopeptidase OS=Mus musculus OX=10090 GN=Npepps PE=1 SV=2; Aminopeptidase OS=Mus musculus OX=10090 GN=Npepps PE=1 SV=1 1 3 3 0.3565 0 1 1 1 489.27039 1465.7966 1465.79606 0.37 0.00018 0/0 0 0 6708162.5 HCD 30 MS2 35.90751 667.4 110 44.1869 11260 11260 11252 QEplus033719.raw F4 809.5 519.8 631.8 564.5 853.7 625 398 3.45 1 FALSE 5.44E-05 0.002467 0.578 -250 42384 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASTALSNEQQAR [R].aSTALSNEQQAR.[R] N-Term(TMT6plex) 3 Q7M739 Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1 Q7M739; F6ZDS4; Q3V1L5 Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1 0 2 2 0.7374 0 1 1 1 752.90033 1504.79338 1504.7917 1.12 0.00084 0/0 0 0 8202447.5 HCD 30 MS2 11.02998 265.3 110 44.192 11262 11262 11252 QEplus033719.raw F4 268.9 233.5 280.1 272 275.3 261.7 284 4.57 1 FALSE 1.14E-05 5.97E-12 2.229 -250 42391 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAYGAR [R].iAYGAR.[A] N-Term(TMT6plex) 2 Q921G7 "Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Mus musculus OX=10090 GN=Etfdh PE=1 SV=1" Q921G7; Q6PF96 "Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Mus musculus OX=10090 GN=Etfdh PE=1 SV=1; Electron transfer flavoprotein-ubiquinone oxidoreductase OS=Mus musculus OX=10090 GN=Etfdh PE=1 SV=1" 0 2 2 0.3899 0 1 1 1 440.26691 879.52654 879.52497 1.78 0.00078 0/0 0 0 79422248 HCD 30 MS2 23.22116 550.3 13.034 44.1993 11264 11264 11263 QEplus033719.raw F4 489 523.2 640.6 382.1 718.6 548.2 25 2.18 1 FALSE 0.008174 0.1388 -0.073 -250 42401 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVSRPVK [K].gVSRPVk.[Y] N-Term(TMT6plex); K7(TMT6plex) 1 B0QZL1 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 B0QZL1 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 0 2 2 0.3264 0 1 1 1 600.89575 1200.78423 1200.78286 1.14 0.00068 0/0 0 0 8909734 HCD 30 MS2 31.73017 650.6 110 44.2018 11265 11265 11263 QEplus033719.raw F4 813.3 285.5 544 1111.3 350.8 798.4 166 1.44 1 FALSE 0.001607 0.02536 0.242 -250 42409 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HFDETVNR [R].hFDETVNR.[Y] N-Term(TMT6plex) 4 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q99LY0; Q91YQ5; Q5RKP4; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 0 2 2 0.6416 0 1 1 1 623.82172 1246.63616 1246.63777 -1.29 -0.0008 0/0 0 0 11047639 HCD 30 MS2 0 703.1 110 44.2088 11268 11268 11263 QEplus033719.raw F4 668.4 607.5 806.3 578.2 812.3 746 150 2.93 1 FALSE 1.14E-05 0.0004925 0.724 -250 42433 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVSRPVK [K].gVSRPVk.[Y] N-Term(TMT6plex); K7(TMT6plex) 1 B0QZL1 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 B0QZL1 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 0 3 3 0.34 0 1 1 1 400.93277 1200.78376 1200.78286 0.74 0.0003 0/0 0 0 166447088 HCD 30 MS2 8.677846 689.6 5.814 44.2158 11271 11271 11263 QEplus033719.raw F4 973.3 145.4 551.6 1354.2 249.1 863.9 166 2 1 FALSE 0.007481 0.1219 -0.045 -250 42437 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLDAAYR [K].rLDAAYR.[S] N-Term(TMT6plex) 8 Q91YT7; Q8BYK6 YTH domain-containing family protein 2 OS=Mus musculus OX=10090 GN=Ythdf2 PE=1 SV=1;YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3 PE=1 SV=2 Q91YT7; Q8BYK6-2; Q8BYK6-3; Q8R5D2; Q8BYK6; Q7TN20; Q3UNH5; Q8BVC6 YTH domain-containing family protein 2 OS=Mus musculus OX=10090 GN=Ythdf2 PE=1 SV=1; Isoform 2 of YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3; Isoform 3 of YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3; Ythdf3 protein (Fragment) OS=Mus musculus OX=10090 GN=Ythdf3 PE=2 SV=1; YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3 PE=1 SV=2; Ythdf3 protein (Fragment) OS=Mus musculus OX=10090 GN=Ythdf3 PE=2 SV=1; YTH domain-containing protein OS=Mus musculus OX=10090 GN=Ythdf2 PE=2 SV=1; YTH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ythdf3 PE=2 SV=1 1 3 3 0.3968 0 1 1 1 365.21585 1093.633 1093.63156 1.32 0.00048 0/0 0 0 28618432 HCD 30 MS2 37.81098 421.5 44.581 44.218 11272 11272 11263 QEplus033719.raw F4 460.7 280.5 439.8 311.4 477.4 559.1 191 3.15 2 FALSE 0.0001504 0.003407 0.545 -250 42450 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSVPGVR [R].sSVPGVR.[L] N-Term(TMT6plex) 10 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; Q3TWV0; A2AKJ2; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.3229 0 1 1 1 465.78268 930.55809 930.557 1.18 0.00055 0/0 0 0 1387094656 HCD 30 MS2 3.773084 445.6 0.94 44.2276 11275 11275 11274 QEplus033719.raw F4 415.4 482.3 463.6 293.6 596 422.9 199 2.23 2 FALSE 0.001092 0.01417 0.343 -250 42458 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPVSPPAR [K].gPVSPPAR.[N] N-Term(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 2 2 0.1916 0 1 1 1 505.30322 1009.59917 1009.5992 -0.03 -0.00001 0/0 0 0 15951931 HCD 30 MS2 28.8152 834 93.154 44.2298 11276 11276 11274 QEplus033719.raw F4 982.7 393.3 842.7 1045.1 521.7 1218.7 49 2.14 1 FALSE 1.14E-05 0.0005595 0.713 -250 42462 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQLEEENK [K].rQLEEENk.[A] N-Term(TMT6plex); K8(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 3 3 0.5752 0 1 1 1 501.95627 1503.85425 1503.85313 0.75 0.00037 0/0 0 0 52946288 HCD 30 MS2 32.2048 986.2 32.387 44.2321 11277 11277 11274 QEplus033719.raw F4 1305.1 294.9 787.3 1825.5 387.2 1317.4 493 4.19 1 FALSE 1.14E-05 3.93E-05 0.934 -250 42475 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIHQFNR [K].eIHQFNR.[D] N-Term(TMT6plex) 3 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q62261; A0A0A0MQG2; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 3 3 0.3621 0 1 1 1 391.55057 1172.63715 1172.63737 -0.19 -0.00007 0/0 0 0 32169050 HCD 30 MS2 23.20016 307.2 33.518 44.2366 11279 11279 11274 QEplus033719.raw F4 354.6 202.2 321.5 259.2 286.7 419.2 239 3.01 2 FALSE 0.001108 0.01435 0.341 -250 42487 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HITDEADRK [K].hITDEADRk.[Y] N-Term(TMT6plex); K9(TMT6plex) 2 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 A0A571BEU1; Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 1 3 3 0.5467 0 1 1 1 514.96033 1542.86643 1542.86403 1.56 0.0008 0/0 0 0 15502061 HCD 30 MS2 11.70109 918.8 110 44.2437 11282 11282 11274 QEplus033719.raw F4 1122.7 824.3 786.8 642.3 1588.4 548.5 385 4.92 1 FALSE 1.14E-05 1.23E-08 1.6 -250 42497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAGDETGAKVER [K].aAGDETGAkVER.[A] N-Term(TMT6plex); K9(TMT6plex) 5 P97351 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3 Q3UJU5; P97351; Q3U5P8; Q3UAC2; Q9D1S3 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1 1 3 3 0.6433 0 1 1 1 554.64886 1661.93204 1661.92227 5.88 0.00326 0/0 0 0 11894284 HCD 30 MS2 16.32613 1083.3 110 44.2462 11283 11283 11274 QEplus033719.raw F4 1133.4 1270.4 1281.2 699.8 1201.5 913.2 507 3.42 1 FALSE 1.14E-05 3.34E-07 1.328 -250 42512 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQQQMEQEK [R].qQQQMEQEk.[Q] N-Term(TMT6plex); K9(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5259 0 1 1 1 817.93341 1634.85954 1634.85723 1.42 0.00116 0/0 0 0 7841186 HCD 30 MS2 0 494.8 110 44.256 11286 11286 11285 QEplus033719.raw F4 565.2 388.1 471.7 463.2 612 468.6 298 4.05 2 FALSE 1.14E-05 1.71E-06 1.193 -250 42519 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THYQADIER [K].tHYQADIER.[M] N-Term(TMT6plex) 2 Q9CZW4 Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=2 E9PUC2; Q9CZW4 Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=1; Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=2 0 2 2 0.6054 0 1 1 1 681.35553 1361.70378 1361.70109 1.97 0.00134 0/0 0 0 3367724.75 HCD 30 MS2 52.99716 345 110 44.2586 11287 11287 11285 QEplus033719.raw F4 326.3 331.3 392.4 334.2 373.5 312.3 200 2.94 1 FALSE 1.14E-05 0.0005915 0.708 -250 42528 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAHYNKR [R].lAHYNkR.[S] N-Term(TMT6plex); K6(TMT6plex) 18 Q64475; Q64525 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3;Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64475; Q8CGP2; Q64525; Q64524; Q8CGP1; P10854; A0JNS9; Q64478; Q8C622; P70696; Q9D2U9; Q8CGP2-2; Q8CBB6; Q6ZWY9; Q8CGP0; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 2-E OS=Mus musculus OX=10090 GN=H2bc21 PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone domain-containing protein OS=Mus musculus OX=10090 GN=H2bc22 PE=2 SV=1; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Histone H2B type 3-A OS=Mus musculus OX=10090 GN=Hist3h2ba PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3; Histone H2B type 3-B OS=Mus musculus OX=10090 GN=H2bu1 PE=1 SV=3; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 1 3 3 0.3447 0 1 1 1 453.94757 1359.82816 1359.82612 1.5 0.00068 0/0 0 0 41962352 HCD 30 MS2 34.58495 960.8 27.075 44.2608 11288 11288 11285 QEplus033719.raw F4 883.8 1067.4 1143.5 988.7 1010.9 670.5 511 2.64 2 FALSE 0.001001 0.01323 0.356 -250 42538 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HITDEADRK [K].hITDEADRk.[Y] N-Term(TMT6plex); K9(TMT6plex) 2 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 A0A571BEU1; Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 1 4 4 0.5126 0 1 1 1 386.47168 1542.86489 1542.86403 0.56 0.00022 0/0 0 0 41124672 HCD 30 MS2 4.590465 419.9 30.569 44.2631 11289 11289 11285 QEplus033719.raw F4 469.4 394.9 340 304 809.9 201 360 2.77 1 FALSE 5.44E-05 0.001745 0.611 -250 42561 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNEMDGER [K].vNEMDGER.[L] N-Term(TMT6plex) 5 Q8C8U0 Liprin-beta-1 OS=Mus musculus OX=10090 GN=Ppfibp1 PE=1 SV=3 F7CUU8; Q8C8U0; Q3UJ84; Q3U417; Q8C8U0-3 Liprin-beta-1 (Fragment) OS=Mus musculus OX=10090 GN=Ppfibp1 PE=1 SV=1; Liprin-beta-1 OS=Mus musculus OX=10090 GN=Ppfibp1 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppfibp1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppfibp1 PE=2 SV=1; Isoform 3 of Liprin-beta-1 OS=Mus musculus OX=10090 GN=Ppfibp1 0 2 2 0.6384 0 1 1 1 589.7851 1178.56291 1178.5673 -3.72 -0.00219 0/0 0 0 8352739.5 HCD 30 MS2 35.23484 827.7 110 44.2701 11292 11292 11285 QEplus033719.raw F4 894.2 751.9 910 699.1 840.3 870.9 65 3.07 1 FALSE 1.14E-05 0.000503 0.722 -250 42571 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QYAGCDYSQQGR [K].qYAGcDYSQQGR.[F] N-Term(TMT6plex); C5(Carbamidomethyl) 1 Q9EQQ2 Protein YIPF5 OS=Mus musculus OX=10090 GN=Yipf5 PE=1 SV=1 Q9EQQ2 Protein YIPF5 OS=Mus musculus OX=10090 GN=Yipf5 PE=1 SV=1 0 2 2 0.9014 0 1 1 1 831.38171 1661.75615 1661.75393 1.33 0.00111 0/0 0 0 2348330.75 HCD 30 MS2 29.90528 253.1 110 44.2751 11294 11294 11285 QEplus033719.raw F4 227.4 245.7 285.3 214.8 307.6 238 33 4.16 1 FALSE 1.14E-05 8.01E-09 1.635 -250 42579 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STGAEPGLAR [R].sTGAEPGLAR.[D] N-Term(TMT6plex) 5 D3Z210 OTU domain-containing protein 7B (Fragment) OS=Mus musculus OX=10090 GN=Otud7b PE=1 SV=8 D3Z210; D3YYZ8; B2RUR8; H3BKW8; Q8R554 OTU domain-containing protein 7B (Fragment) OS=Mus musculus OX=10090 GN=Otud7b PE=1 SV=8; OTU domain-containing protein 7B (Fragment) OS=Mus musculus OX=10090 GN=Otud7b PE=1 SV=8; OTU domain-containing protein 7B OS=Mus musculus OX=10090 GN=Otud7b PE=1 SV=1; Ubiquitinyl hydrolase 1 (Fragment) OS=Mus musculus OX=10090 GN=Otud7a PE=1 SV=8; OTU domain-containing protein 7A OS=Mus musculus OX=10090 GN=Otud7a PE=1 SV=1 0 2 2 0.5188 0 1 1 1 594.33392 1187.66057 1187.65817 2.02 0.0012 0/0 0 0 2279889.5 HCD 30 MS2 30.51611 315 110 44.2777 11295 11295 11285 QEplus033719.raw F4 317 284.7 332.7 250.6 369.3 335.7 318 2.93 1 FALSE 1.14E-05 2.78E-07 1.343 -250 42585 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKSDEDQER [K].lkSDEDQER.[V] N-Term(TMT6plex); K2(TMT6plex) 3 Q61576 Peptidyl-prolyl cis-trans isomerase FKBP10 OS=Mus musculus OX=10090 GN=Fkbp10 PE=1 SV=2 Q61576; A2A4H9; Q3UNJ3 Peptidyl-prolyl cis-trans isomerase FKBP10 OS=Mus musculus OX=10090 GN=Fkbp10 PE=1 SV=2; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp10 PE=1 SV=1; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp10 PE=2 SV=1 1 2 2 0.6446 0 1 1 1 789.42883 1577.85039 1577.85352 -1.98 -0.00157 0/0 0 0 1575784.5 HCD 30 MS2 54.75375 171 110 44.285 11297 11297 11296 QEplus033719.raw F4 179.9 136.4 176.6 155.7 213.8 163.4 395 2.87 1 FALSE 0.0003996 0.00718 0.455 -250 42612 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQQQMEQEK [R].qQQQMEQEk.[Q] N-Term(TMT6plex); K9(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.7542 0 1 1 1 545.62427 1634.85825 1634.85723 0.63 0.00034 0/0 0 0 30448364 HCD 30 MS2 26.93797 995.5 87.855 44.2962 11302 11302 11296 QEplus033719.raw F4 1316.5 735.3 955.6 808.9 1097 1059.9 288 4.72 2 FALSE 1.14E-05 1.78E-05 1 -250 42620 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKSDEDQER [K].lkSDEDQER.[V] N-Term(TMT6plex); K2(TMT6plex) 3 Q61576 Peptidyl-prolyl cis-trans isomerase FKBP10 OS=Mus musculus OX=10090 GN=Fkbp10 PE=1 SV=2 Q61576; A2A4H9; Q3UNJ3 Peptidyl-prolyl cis-trans isomerase FKBP10 OS=Mus musculus OX=10090 GN=Fkbp10 PE=1 SV=2; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp10 PE=1 SV=1; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp10 PE=2 SV=1 1 3 3 0.5623 0 1 1 1 526.62341 1577.85569 1577.85352 1.37 0.00072 0/0 0 0 23470672 HCD 30 MS2 22.38699 925.2 63.845 44.2985 11303 11303 11296 QEplus033719.raw F4 984.8 671.1 900.9 1022.3 1064.9 907.4 383 2.81 1 FALSE 4.43E-05 0.001439 0.629 -250 42625 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGTPGGPGIR [R].dGTPGGPGIR.[G] N-Term(TMT6plex) 7 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 2 2 0.5288 0 1 1 1 578.31989 1155.63249 1155.63195 0.47 0.00027 0/0 0 0 20994988 HCD 30 MS2 8.123019 993.9 110 44.301 11304 11304 11296 QEplus033719.raw F4 920.4 1046.1 1175.6 671.7 935.7 1213.8 193 3.12 1 FALSE 0.0002419 0.005049 0.5 -250 42634 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NGLCVNSR [K].nGLcVNSR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 3 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q60784 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Fibrillin-1 (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1 0 2 2 0.4789 0 1 1 1 574.80493 1148.60259 1148.60436 -1.54 -0.00089 0/0 0 0 19664828 HCD 30 MS2 37.67197 576.9 39.99 44.3033 11305 11305 11296 QEplus033719.raw F4 581.1 427.3 644.9 660.4 401.2 746.4 238 2.61 1 FALSE 1.14E-05 0.0005042 0.722 -250 42644 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APDRTPPSEEDSAEAER [R].aPDRTPPSEEDSAEAER.[L] N-Term(TMT6plex) 4 Q8BJU0 Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=2 Q8BJU0; A0A1W2P6P1; A0A1W2P7I5; Q8BJU0-2 Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=2; Small glutamine-rich tetratricopeptide repeat-containing protein alpha (Fragment) OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=1; Small glutamine-rich tetratricopeptide repeat-containing protein alpha (Fragment) OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=1; Isoform 2 of Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus OX=10090 GN=Sgta 1 3 3 0.7908 0 1 1 1 696.00146 2085.98984 2085.98862 0.59 0.00041 0/0 0 0 14823278 HCD 30 MS2 0 252.8 110 44.3131 11308 11308 11307 QEplus033719.raw F4 278.3 205 301.7 222.6 251.1 257.9 111 5.64 1 FALSE 1.14E-05 2.05E-14 2.697 -250 42657 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGPSVTDK [K].rGPSVTDk.[V] N-Term(TMT6plex); K8(TMT6plex) 1 P30412 Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus OX=10090 GN=Ppic PE=1 SV=1 P30412 Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus OX=10090 GN=Ppic PE=1 SV=1 1 3 3 0.3989 0 1 1 1 439.93506 1317.79062 1317.78907 1.18 0.00052 0/0 0 0 62392836 HCD 30 MS2 9.378145 539.2 15.728 44.3177 11310 11310 11307 QEplus033719.raw F4 567.9 376.6 527.5 457.4 776.4 529.3 535 3.61 1 FALSE 1.14E-05 1.70E-05 1.004 -250 42663 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVISSANR [K].kVISSANR.[A] N-Term(TMT6plex); K1(TMT6plex) 3 P62918 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2 P62918; Q9Z237; Q3THC7 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2; Ribosomal protein L8 (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1 1 3 3 0.4449 0 1 1 1 444.95078 1332.83777 1332.83635 1.06 0.00047 0/0 0 0 36511452 HCD 30 MS2 29.38223 799.7 30.844 44.32 11311 11311 11307 QEplus033719.raw F4 949.1 541.7 868 891.5 815.5 732.2 364 2.54 1 FALSE 7.59E-05 0.002854 0.563 -250 42673 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQLEEENK [K].rQLEEENk.[A] N-Term(TMT6plex); K8(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 2 2 0.4487 0 1 1 1 752.43121 1503.85515 1503.85313 1.35 0.00101 0/0 0 0 19615582 HCD 30 MS2 19.49533 582.4 109.42 44.3225 11312 11312 11307 QEplus033719.raw F4 785.2 119.3 396 1261 125.8 806.8 471 3.12 1 FALSE 1.14E-05 0.0004002 0.741 -250 42679 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAHYNKR [R].lAHYNkR.[S] N-Term(TMT6plex); K6(TMT6plex) 18 Q64475; Q64525 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3;Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64475; Q8CGP2; Q64525; Q64524; Q8CGP1; P10854; A0JNS9; Q64478; Q8C622; P70696; Q9D2U9; Q8CGP2-2; Q8CBB6; Q6ZWY9; Q8CGP0; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 2-E OS=Mus musculus OX=10090 GN=H2bc21 PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone domain-containing protein OS=Mus musculus OX=10090 GN=H2bc22 PE=2 SV=1; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Histone H2B type 3-A OS=Mus musculus OX=10090 GN=Hist3h2ba PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3; Histone H2B type 3-B OS=Mus musculus OX=10090 GN=H2bu1 PE=1 SV=3; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 1 2 2 0.303 0 1 1 1 680.41711 1359.82695 1359.82612 0.61 0.00041 0/0 0 0 14956768 HCD 30 MS2 14.45633 463.3 110 44.3251 11313 11313 11307 QEplus033719.raw F4 396.3 547.3 574.6 460.9 514.4 286.2 519 2.31 2 FALSE 0.004832 0.08443 0.05 -250 42706 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAIVVHSR [K].aAIVVHSR.[Y] N-Term(TMT6plex) 4 Q91VE0 Long-chain fatty acid transport protein 4 OS=Mus musculus OX=10090 GN=Slc27a4 PE=1 SV=1 Q3TN26; Q3TP13; Q544D7; Q91VE0 AMP-binding domain-containing protein OS=Mus musculus OX=10090 GN=Slc27a1 PE=2 SV=1; AMP-binding domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Slc27a1 PE=2 SV=1; AMP-binding domain-containing protein OS=Mus musculus OX=10090 GN=Slc27a1 PE=1 SV=1; Long-chain fatty acid transport protein 4 OS=Mus musculus OX=10090 GN=Slc27a4 PE=1 SV=1 0 3 3 0.6413 0 1 1 1 361.22833 1081.67044 1081.66794 2.31 0.00083 0/0 0 0 7535477 HCD 30 MS2 41.85703 613.7 110 44.3323 11316 11316 11307 QEplus033719.raw F4 1271.4 259.8 817.4 389.7 368.5 575.3 41 3.29 1 FALSE 3.35E-05 0.001278 0.64 -250 42713 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVISSANR [K].kVISSANR.[A] N-Term(TMT6plex); K1(TMT6plex) 3 P62918 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2 P62918; Q9Z237; Q3THC7 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2; Ribosomal protein L8 (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1 1 2 2 0.5588 0 1 1 1 666.9231 1332.83891 1332.83635 1.92 0.00128 0/0 0 0 5996515 HCD 30 MS2 13.05549 387.4 110 44.3349 11317 11317 11307 QEplus033719.raw F4 462.4 272.4 428.5 407.8 391.1 362 254 2.04 1 FALSE 3.35E-05 0.00137 0.634 -250 42730 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQGVMVGMGQK [R-].hQGVmVGmGQk.[D] N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3UCF8; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 3 3 0.6213 0 1 1 1 554.63422 1661.8881 1661.88675 0.81 0.00045 0/0 0 0 44201720 HCD 30 MS2 44.46682 667 23.871 44.3467 11321 11321 11318 QEplus033719.raw F4 672.9 799.7 826.2 505.8 639.4 558.1 371 4.41 4 FALSE 1.14E-05 2.03E-06 1.179 -250 42737 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LPESER [K].lPESER.[K] N-Term(TMT6plex) 4 E9QNY8 Sacsin OS=Mus musculus OX=10090 GN=Sacs PE=1 SV=1 Q9JLC8-3; E9QNY8; Q9JLC8; Q9JLC8-2 Isoform 3 of Sacsin OS=Mus musculus OX=10090 GN=Sacs; Sacsin OS=Mus musculus OX=10090 GN=Sacs PE=1 SV=1; Sacsin OS=Mus musculus OX=10090 GN=Sacs PE=1 SV=2; Isoform 2 of Sacsin OS=Mus musculus OX=10090 GN=Sacs 0 2 2 0.1878 0 1 1 1 480.27185 959.53642 959.53593 0.52 0.00025 0/0 0 0 29854868 HCD 30 MS2 31.97537 640 38.946 44.3489 11322 11322 11318 QEplus033719.raw F4 634.8 473.4 851.6 763.8 362.9 753.3 130 1.81 1 FALSE 0.003658 0.06982 0.088 -250 42754 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TATAVAHCK [K].tATAVAHck.[R] N-Term(TMT6plex); C8(Carbamidomethyl); K9(TMT6plex) 3 Q641N3 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 Q641N3; P14131; Q5CZY9 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1; 40S ribosomal protein S16 OS=Mus musculus OX=10090 GN=Rps16 PE=1 SV=4; Rps16 protein OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 0 3 3 0.5226 0 1 1 1 472.93973 1416.80463 1416.80334 0.91 0.00043 0/0 0 0 20978840 HCD 30 MS2 59.1108 1047.4 49.042 44.3534 11324 11324 11318 QEplus033719.raw F4 1435.3 714.2 1105.1 961.1 1090.2 978.3 376 2.87 1 FALSE 1.14E-05 0.0003182 0.76 -250 42768 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGPSVTDK [K].rGPSVTDk.[V] N-Term(TMT6plex); K8(TMT6plex) 1 P30412 Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus OX=10090 GN=Ppic PE=1 SV=1 P30412 Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus OX=10090 GN=Ppic PE=1 SV=1 1 2 2 0.3039 0 1 1 1 659.39911 1317.79094 1317.78907 1.42 0.00094 0/0 0 0 5752014.5 HCD 30 MS2 28.20658 290.2 110 44.3584 11326 11326 11318 QEplus033719.raw F4 307.9 200.4 276 267.8 401.3 287.6 535 2.04 1 FALSE 0.003381 0.06528 0.1 -250 42789 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLESAEER [K].dLESAEER.[R] N-Term(TMT6plex) 4 Q3ULJ5 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 Q3ULJ5; Q3U5M8; P14685; Q8BK46 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus OX=10090 GN=Psmd3 PE=1 SV=3; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 0 2 2 0.5308 0 1 1 1 589.29938 1177.59148 1177.58981 1.41 0.00083 0/0 0 0 42429224 HCD 30 MS2 20.28501 655.5 34.199 44.3705 11330 11330 11329 QEplus033719.raw F4 713.2 538.1 751.8 597 600 733.1 137 2.92 1 FALSE 5.44E-05 0.001788 0.609 -250 42802 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDSGLYR [K].tDSGLYR.[C] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A2AT70; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.4105 0 1 1 1 520.78314 1040.55901 1040.55739 1.55 0.00081 0/0 0 0 17610034 HCD 30 MS2 25.34068 969.5 110 44.3798 11334 11334 11329 QEplus033719.raw F4 1107.4 349.7 847.3 1586.6 480.8 1445.1 139 1.9 2 FALSE 0.00315 0.0616 0.11 -250 42808 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EETGVAMR [K].eETGVAMR.[I] N-Term(TMT6plex) 1 P21981 Protein-glutamine gamma-glutamyltransferase 2 OS=Mus musculus OX=10090 GN=Tgm2 PE=1 SV=4 P21981 Protein-glutamine gamma-glutamyltransferase 2 OS=Mus musculus OX=10090 GN=Tgm2 PE=1 SV=4 0 2 2 0.528 0 1 1 1 561.29565 1121.58403 1121.58222 1.61 0.0009 0/0 0 0 16951012 HCD 30 MS2 43.47332 673 87.601 44.382 11335 11335 11329 QEplus033719.raw F4 630 487.7 728.3 834.2 513.8 843.9 191 2.86 1 FALSE 1.14E-05 0.0006576 0.699 -250 42813 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FRREEDAEK [K].fRREEDAEk.[A] N-Term(TMT6plex); K9(TMT6plex) 3 Q14C24 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 OS=Mus musculus OX=10090 GN=U2af1 PE=1 SV=1 G3UW94; Q14C24; A0A494B947 Splicing factor U2AF 35 kDa subunit OS=Mus musculus OX=10090 GN=U2af1 PE=1 SV=1; U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 OS=Mus musculus OX=10090 GN=U2af1 PE=1 SV=1; Splicing factor U2AF 35 kDa subunit (Fragment) OS=Mus musculus OX=10090 GN=U2af1 PE=1 SV=1 2 4 4 0.4406 0 1 1 1 410.23102 1637.90224 1637.90114 0.67 0.00028 0/0 0 0 15111334 HCD 30 MS2 31.85338 743.3 88.326 44.3865 11337 11337 11329 QEplus033719.raw F4 777.5 687.4 787.7 590.5 898.9 717.6 435 3.45 1 FALSE 5.44E-05 0.001798 0.609 -250 42822 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESESVDK [K].eSESVDk.[V] N-Term(TMT6plex); K7(TMT6plex) 9 Q60668; G5E8G0 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2;Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1 Q60668; F6ZV59; G5E8G0; Q60668-4; G3X9W0; Q60668-2; Q3UXC8; Q60668-3; E9Q5B6 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein D0 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1; Isoform 4 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd; Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=2 SV=1; Isoform 3 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd; Heterogeneous nuclear ribonucleoprotein D0 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1 0 2 2 0.424 0 1 1 1 626.34564 1251.68401 1251.68327 0.59 0.00037 0/0 0 0 10244928 HCD 30 MS2 7.456453 858.3 110 44.389 11338 11338 11329 QEplus033719.raw F4 1585 671.6 993.9 501 576 822.4 257 2.17 2 FALSE 0.0008183 0.0113 0.384 -250 42831 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQQAIQTVR [K].nQQAIQTVR.[A] N-Term(TMT6plex) 1 Q9WV95 Pleckstrin homology-like domain family A member 3 OS=Mus musculus OX=10090 GN=Phlda3 PE=1 SV=1 Q9WV95 Pleckstrin homology-like domain family A member 3 OS=Mus musculus OX=10090 GN=Phlda3 PE=1 SV=1 0 2 2 0.559 0 1 1 1 643.87103 1286.73479 1286.73781 -2.35 -0.00151 0/0 0 0 7819392 HCD 30 MS2 27.53406 737.2 110 44.3916 11339 11339 11329 QEplus033719.raw F4 790 728.7 808.4 576.9 829.8 689.1 380 2.29 1 FALSE 0.0003996 0.00711 0.456 -250 42837 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTGARPYTGK [K].gTGARPYTGk.[V] N-Term(TMT6plex); K10(TMT6plex) 4 Q6XMP4 Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1 Q6XMP4; Q8BGQ7; Q3TZ32; Q3UD67 "Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1" 0 2 2 0.3415 0 1 1 1 733.43091 1465.85454 1465.85273 1.23 0.0009 0/0 0 0 4729778.5 HCD 30 MS2 50.56194 233.1 110 44.3989 11341 11341 11340 QEplus033719.raw F4 236.2 203.5 235.5 188.4 324.9 210.3 468 1.23 1 FALSE 0.002603 0.05156 0.137 -250 42844 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNPSKPLR [K].nNPSkPLR.[V] N-Term(TMT6plex); K5(TMT6plex) 8 O88342 WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3 Q3TNK2; O88342; Q9DC08; Q3TE06; Q3U136; A0A0J9YU05; Q9DBM8; Q80ZI9 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat domain 1 (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1 0 2 2 0.21 0 1 1 1 692.43213 1383.85698 1383.84725 7.03 0.00486 0/0 0 0 2666833.5 HCD 30 MS2 0 197.4 110 44.4014 11342 11342 11340 QEplus033719.raw F4 197.3 164.5 194 148.6 301 179.1 165 2.19 1 FALSE 0.001343 0.01894 0.291 -250 42851 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CPNCGTHYK [R].cPNcGTHYk.[L] N-Term(TMT6plex); C1(Carbamidomethyl); C4(Carbamidomethyl); K9(TMT6plex) 2 P19536 "Cytochrome c oxidase subunit 5B, mitochondrial OS=Mus musculus OX=10090 GN=Cox5b PE=1 SV=1" P19536; Q9D881 "Cytochrome c oxidase subunit 5B, mitochondrial OS=Mus musculus OX=10090 GN=Cox5b PE=1 SV=1; Cytochrome c oxidase polypeptide Vb OS=Mus musculus OX=10090 GN=Cox5b-ps PE=1 SV=1" 0 3 3 0.7448 0 1 1 1 532.26776 1594.78873 1594.78704 1.06 0.00056 0/0 0 0 82293152 HCD 30 MS2 46.13745 493.5 13.362 44.4036 11343 11343 11340 QEplus033719.raw F4 512.4 354.3 529.6 533.2 437.6 594 168 3.84 1 FALSE 1.14E-05 8.87E-06 1.057 -250 42855 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RATVLESEGTR [K].rATVLESEGTR.[E] N-Term(TMT6plex) 3 Q99JB2 "Stomatin-like protein 2, mitochondrial OS=Mus musculus OX=10090 GN=Stoml2 PE=1 SV=1" F6WI02; Q99JB2; A2AG39 "Stomatin-like protein 2, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Stoml2 PE=1 SV=1; Stomatin-like protein 2, mitochondrial OS=Mus musculus OX=10090 GN=Stoml2 PE=1 SV=1; Stomatin-like protein 2, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Stoml2 PE=1 SV=1" 1 3 3 0.6781 0 1 1 1 483.27451 1447.80896 1447.80662 1.62 0.00078 0/0 0 0 20837090 HCD 30 MS2 47.74666 581.7 49.671 44.4059 11344 11344 11340 QEplus033719.raw F4 845.5 375.4 540.4 631 586.4 511.5 396 4.66 1 FALSE 1.14E-05 6.62E-09 1.651 -250 42860 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSPDEPLR [K].qSPDEPLR.[S] N-Term(TMT6plex) 14 Q8BUM1 TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1 Q8R0B4; A0A087WSH7; Q8BUM1; A0A087WRP4; H3BJV1; C9DT14; A0A087WQA5; Q6VYI5; A0A087WS74; A0A087WRZ5; Q544R5; Q8BLD4; Q6VYI4; Q05C33 TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1; TAR DNA-binding protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=2; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1; TAR DNA-binding protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1 0 2 2 0.4648 0 1 1 1 585.82001 1170.63274 1170.63162 0.96 0.00056 0/0 0 0 10635373 HCD 30 MS2 7.606008 690.4 110 44.4084 11345 11345 11340 QEplus033719.raw F4 731.6 690 798.2 511 748.1 663.3 184 2.84 1 FALSE 0.0002909 0.005889 0.481 -250 42874 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMSSLQNDRDR [K].aMSSLQNDRDR.[L] N-Term(TMT6plex) 7 B2RWW2 Golgb1 protein OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1 B2RWW2; E9QAH1; Q571K1; E9PVZ8; Q6PAK0; Q8CGE5; Q80UY9 "Golgb1 protein OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1; Golgi autoantigen, golgin subfamily b, macrogolgin 1 OS=Mus musculus OX=10090 GN=Golgb1 PE=1 SV=1; MKIAA4151 protein (Fragment) OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1; Golgi autoantigen, golgin subfamily b, macrogolgin 1 OS=Mus musculus OX=10090 GN=Golgb1 PE=1 SV=1; Golgb1 protein (Fragment) OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1; Golgb1 protein (Fragment) OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1; Golgb1 protein (Fragment) OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1" 1 3 3 0.5014 0 1 1 1 507.92484 1521.75995 1521.7641 -2.73 -0.00138 0/0 0 0 5503581 HCD 30 MS2 41.68856 595.5 110 44.4134 11347 11347 11340 QEplus033719.raw F4 645.5 460.2 651.3 511.4 609.2 695.5 164 3.51 1 FALSE 7.59E-05 0.002821 0.564 -250 42916 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNPSKPLR [K].nNPSkPLR.[V] N-Term(TMT6plex); K5(TMT6plex) 8 O88342 WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3 Q3TNK2; O88342; Q9DC08; Q3TE06; Q3U136; A0A0J9YU05; Q9DBM8; Q80ZI9 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat domain 1 (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1 0 3 3 0.1563 0 1 1 1 461.95453 1383.84903 1383.84725 1.29 0.00059 0/0 0 0 41466788 HCD 30 MS2 18.8976 718.9 27.397 44.4303 11353 11353 11351 QEplus033719.raw F4 694.8 611.8 715.1 567.4 1117.3 607.1 227 2.24 1 FALSE 0.001658 0.02733 0.231 -250 42923 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERDVIMR [K].eRDVIMR.[E] N-Term(TMT6plex) 12 Q3UXC2; P10630 RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1;Eukaryotic initiation factor 4A-II OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=2 E9Q561; A0A338P6X5; Q3U8I0; Q3UXC2; P60843; Q3TGK7; Q3TLL6; P10630-2; Q8BTU6; Q4FZL1; Q3TFG3; P10630 Eukaryotic initiation factor 4A-II OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; Eukaryotic initiation factor 4A-I OS=Mus musculus OX=10090 GN=Eif4a1 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; Isoform 2 of Eukaryotic initiation factor 4A-II OS=Mus musculus OX=10090 GN=Eif4a2; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; Eukaryotic initiation factor 4A-II OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=2 1 3 3 0.4066 0 1 1 1 383.2204 1147.64664 1147.64549 1 0.00038 0/0 0 0 129523032 HCD 30 MS2 19.9194 319.5 8.376 44.4325 11354 11354 11351 QEplus033719.raw F4 334.2 252.3 341.6 238.4 384.6 366 299 2.73 2 FALSE 4.43E-05 0.001459 0.628 -250 42940 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVESDSAK [K].dVESDSAk.[Q] N-Term(TMT6plex); K8(TMT6plex) 13 P09103 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2 P09103; Q3URP6; Q3TWE3; Q3U738; Q3TT76; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; Q3UA23; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 0 2 2 0.6079 0 1 1 1 654.85675 1308.70622 1308.70473 1.14 0.00075 0/0 0 0 14203511 HCD 30 MS2 5.420844 985.5 110 44.444 11359 11359 11351 QEplus033719.raw F4 1477.9 809.2 1111.4 679 1000.8 834.9 317 3.29 1 FALSE 1.14E-05 0.000121 0.841 -250 42949 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQGVMVGMGQK [R-].hQGVmVGmGQk.[D] N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3UCF8; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 2 2 0.6709 0 1 1 1 831.4472 1661.88713 1661.88675 0.23 0.00019 0/0 0 0 13195077 HCD 30 MS2 33.45416 494.4 110 44.4466 11360 11360 11351 QEplus033719.raw F4 503.4 663.3 635.2 440 312.8 411.5 364 2.37 4 FALSE 0.0008363 0.01158 0.38 -250 42965 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGIPPDQQR [K].eGIPPDQQR.[LV] N-Term(TMT6plex) 18 P62984; P62983 Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2;Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2 E9Q5F6; P62984; Q922Z8; Q922B0; Q3TH47; Q5SX22; E9Q4P0; P62983; Q78XY9; E9Q9J0; Q8R0Z9; B0LAC2; Q8C2K3; Q8VC46; A5JUZ1; A0A0A6YW67; E9QNP0; P0CG50 Polyubiquitin-C (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=1; Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Polyubiquitin-B (Fragment) OS=Mus musculus OX=10090 GN=Ubb PE=4 SV=2; KxDL motif-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2; Ubiquitin B OS=Mus musculus OX=10090 GN=Ubb PE=2 SV=1; 60S ribosomal protein L40 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=3 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiquitin A-52 residue ribosomal protein fusion product 1 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubb-ps PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiqutin subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Predicted pseudogene 8797 OS=Mus musculus OX=10090 GN=Gm8797 PE=4 SV=1; 60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Polyubiquitin-C OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=2 0 2 2 0.6655 0 1 1 1 634.84406 1268.68083 1268.67963 0.95 0.0006 0/0 0 0 57214680 HCD 30 MS2 2.600039 532.2 40.918 44.4564 11363 11363 11362 QEplus033719.raw F4 543 440.8 558.4 413.1 619.3 618.8 285 2.9 2 FALSE 1.14E-05 0.0006682 0.697 -250 42967 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGEGMGIR [R].sGEGMGIR.[L] N-Term(TMT6plex) 8 G5E8R3 Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=1 SV=1 G5E8R3; Q3UFS6; Q05920; Q3TCQ3; Q8BP54; Q3T9S7; E9QPD7; Q62043 "Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=1 SV=1; Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1; Pyruvate carboxylase, mitochondrial OS=Mus musculus OX=10090 GN=Pc PE=1 SV=1; Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1; Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1; Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=1 SV=1; Pyruvate carboxylase (Fragment) OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1" 0 2 2 0.3911 0 1 1 1 518.27649 1035.5457 1035.54545 0.25 0.00013 0/0 0 0 12280205 HCD 30 MS2 4.11426 791.7 110 44.4589 11364 11364 11362 QEplus033719.raw F4 863.6 448.7 849 990.3 555.1 1043.5 139 2.25 1 FALSE 5.44E-05 0.002402 0.581 -250 42976 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TATAVAHCK [K].tATAVAHck.[R] N-Term(TMT6plex); C8(Carbamidomethyl); K9(TMT6plex) 3 Q641N3 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 Q641N3; P14131; Q5CZY9 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1; 40S ribosomal protein S16 OS=Mus musculus OX=10090 GN=Rps16 PE=1 SV=4; Rps16 protein OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 0 2 2 0.6853 0 1 1 1 708.90631 1416.80535 1416.80334 1.42 0.001 0/0 0 0 10595663 HCD 30 MS2 14.23742 488.4 110 44.4662 11367 11367 11362 QEplus033719.raw F4 641 328.4 545.7 557.1 439.1 419 364 3.75 1 FALSE 1.14E-05 1.23E-06 1.22 -250 42986 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DANNPAENGDAK [K].dANNPAENGDAk.[TR] N-Term(TMT6plex); K12(TMT6plex) 7 Q5XK38 Hmgn2 protein OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1 Q5XK38; A3KGL9; Q58E57; A0A087WR34; F6W687; Q5BL14; B7ZCQ3 "Hmgn2 protein OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; Non-histone chromosomal protein HMG-17 OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; High mobility group nucleosomal binding domain 2 OS=Mus musculus OX=10090 GN=Hmgn2 PE=2 SV=1; Predicted gene, 20379 (Fragment) OS=Mus musculus OX=10090 GN=Gm20379 PE=3 SV=1; Non-histone chromosomal protein HMG-17 (Fragment) OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; High mobility group nucleosomal binding domain 2 OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; Non-histone chromosomal protein HMG-17 OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1" 0 2 2 0.7109 0 1 1 1 837.42957 1673.85185 1673.8495 1.41 0.00118 0/0 0 0 8907109 HCD 30 MS2 0 539.9 110 44.4687 11368 11368 11362 QEplus033719.raw F4 571 521 443.1 373.9 865.2 465.4 206 4.6 1 FALSE 1.14E-05 2.31E-11 2.118 -250 42993 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DHPQQQPGMLSR [K].dHPQQQPGMLSR.[V] N-Term(TMT6plex) 1 Q9DAM7 Transmembrane protein 263 OS=Mus musculus OX=10090 GN=Tmem263 PE=1 SV=1 Q9DAM7 Transmembrane protein 263 OS=Mus musculus OX=10090 GN=Tmem263 PE=1 SV=1 0 3 3 0.6347 0 1 1 1 541.61481 1622.82987 1622.82704 1.74 0.00094 0/0 0 0 6899553.5 HCD 30 MS2 72.36088 581.6 110 44.4712 11369 11369 11362 QEplus033719.raw F4 656.8 333.6 514.9 740.8 513.2 730 272 3.75 1 FALSE 1.14E-05 8.77E-08 1.438 -250 42998 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPGAPNCDK [K].nPGAPNcDk.[T] N-Term(TMT6plex); C7(Carbamidomethyl); K9(TMT6plex) 2 Q7TQ48-1 Isoform 2 of Sarcalumenin OS=Mus musculus OX=10090 GN=Srl Q7TQ48; Q7TQ48-1 Sarcalumenin OS=Mus musculus OX=10090 GN=Srl PE=1 SV=2; Isoform 2 of Sarcalumenin OS=Mus musculus OX=10090 GN=Srl 0 2 2 0.618 0 1 1 1 715.87769 1430.74809 1430.74622 1.31 0.00094 0/0 0 0 5844731.5 HCD 30 MS2 31.21903 614.3 110 44.4737 11370 11370 11362 QEplus033719.raw F4 792.6 176 526.5 948 289 953.4 216 2.67 1 FALSE 1.14E-05 4.79E-06 1.108 -250 43008 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DANNPAENGDAK [K].dANNPAENGDAk.[TR] N-Term(TMT6plex); K12(TMT6plex) 7 Q5XK38 Hmgn2 protein OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1 Q5XK38; A3KGL9; Q58E57; A0A087WR34; F6W687; Q5BL14; B7ZCQ3 "Hmgn2 protein OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; Non-histone chromosomal protein HMG-17 OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; High mobility group nucleosomal binding domain 2 OS=Mus musculus OX=10090 GN=Hmgn2 PE=2 SV=1; Predicted gene, 20379 (Fragment) OS=Mus musculus OX=10090 GN=Gm20379 PE=3 SV=1; Non-histone chromosomal protein HMG-17 (Fragment) OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; High mobility group nucleosomal binding domain 2 OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; Non-histone chromosomal protein HMG-17 OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1" 0 3 3 0.7688 0 1 1 1 558.6217 1673.85056 1673.8495 0.63 0.00035 0/0 0 0 20061438 HCD 30 MS2 12.61239 741.6 100.134 44.4786 11372 11372 11362 QEplus033719.raw F4 782.1 693.9 621.7 544.4 1137.6 670.1 198 3.85 1 FALSE 1.14E-05 1.23E-07 1.41 -250 43023 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NISAPESR [R].nISAPESR.[L] N-Term(TMT6plex) 3 Q9CY73 "39S ribosomal protein L44, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl44 PE=1 SV=3" Q9CY73; Q3UKG1; Q3U9C4 "39S ribosomal protein L44, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl44 PE=1 SV=3; DRBM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Mrpl44 PE=2 SV=1; DRBM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Mrpl44 PE=2 SV=1" 0 2 2 0.3722 0 1 1 1 551.8075 1102.60771 1102.6054 2.1 0.00116 0/0 0 0 13466832 HCD 30 MS2 19.26942 719.2 110 44.4884 11375 11375 11373 QEplus033719.raw F4 733.7 589.1 773.6 679.8 800 739 281 2.66 1 FALSE 2.26E-05 0.001023 0.66 -250 43030 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDGYSTK [R].dDGYSTk.[D] N-Term(TMT6plex); K7(TMT6plex) 6 Q9WV02; Q91VM5 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1;RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" A2AFI3; Q9WV02-2; A0A2I3BRL8; Q9WV02; Q91VM5; S4R1F6 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; Isoform 2 of RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx; Predicted gene 7324 OS=Mus musculus OX=10090 GN=Gm7324 PE=4 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1" 0 2 2 0.3402 0 1 1 1 622.33203 1243.65679 1243.65705 -0.21 -0.00013 0/0 0 0 18970356 HCD 30 MS2 21.71353 1058.8 110 44.4909 11376 11376 11373 QEplus033719.raw F4 1286.4 1082.7 1221.3 641.8 1240.1 880.3 163 2.41 2 FALSE 0.0007626 0.01068 0.393 -250 43040 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTPTEAPADCR [K].kTPTEAPADcR.[A] N-Term(TMT6plex); K1(TMT6plex); C10(Carbamidomethyl) 10 Q4JG03 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1 Q3TMX4; Q3TL29; Q7TMY8-4; Q4JG03; Q3TNP1; Q7TMY8-3; Q7TMY8; Q7TMY8-2; A2AFQ0; Q8BKX3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; DUF908 domain-containing protein OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; Isoform 4 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; Isoform 3 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=5; Isoform 2 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=1; UBA domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1 1 3 3 0.6667 0 1 1 1 568.64545 1703.92179 1703.91508 3.94 0.00224 0/0 0 0 3052865.25 HCD 30 MS2 0 360.3 110 44.4934 11377 11377 11373 QEplus033719.raw F4 391.5 287.8 393.4 323.2 325.4 440.6 409 3.33 1 FALSE 9.73E-05 0.002933 0.56 -250 43045 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPQPQPPPPEGR [K].qPQPQPPPPEGR.[T] N-Term(TMT6plex) 2 Q68FL6 "Methionine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Mars1 PE=1 SV=1" E9QB02; Q68FL6 "Methionine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Mars1 PE=1 SV=1; Methionine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Mars1 PE=1 SV=1" 0 2 2 0.5825 0 1 1 1 778.92365 1556.84001 1556.83826 1.13 0.00088 0/0 0 0 2280080.5 HCD 30 MS2 0 129 110 44.4959 11378 11378 11373 QEplus033719.raw F4 134.2 93.2 120.7 131.8 153.1 140.9 338 3.09 1 FALSE 1.14E-05 7.63E-06 1.07 -250 43065 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MKQEPVRSEEGR [K].mkQEPVRSEEGR.[D] N-Term(TMT6plex); K2(TMT6plex) 1 Q62159 Rho-related GTP-binding protein RhoC OS=Mus musculus OX=10090 GN=Rhoc PE=1 SV=2 Q62159 Rho-related GTP-binding protein RhoC OS=Mus musculus OX=10090 GN=Rhoc PE=1 SV=2 2 4 4 0.4637 0 1 1 1 476.7662 1904.04299 1904.0424 0.31 0.00015 0/0 0 0 11284889 HCD 30 MS2 6.907884 792.1 110 44.5032 11381 11381 11373 QEplus033719.raw F4 787.5 772.9 870.7 590.3 1001.4 729.9 422 2.89 1 FALSE 5.44E-05 0.002088 0.594 -250 43082 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WEECSNR [R].wEEcSNR.[F] N-Term(TMT6plex); C4(Carbamidomethyl) 2 Q147V6 Stbd1 protein OS=Mus musculus OX=10090 GN=Stbd1 PE=2 SV=1 Q147V6; Q8C7E7 Stbd1 protein OS=Mus musculus OX=10090 GN=Stbd1 PE=2 SV=1; Starch-binding domain-containing protein 1 OS=Mus musculus OX=10090 GN=Stbd1 PE=1 SV=1 0 2 2 0.5374 0 1 1 1 605.28064 1209.554 1209.55199 1.67 0.00101 0/0 0 0 9113248 HCD 30 MS2 22.26584 591.7 110 44.5155 11385 11385 11384 QEplus033719.raw F4 635.2 408.7 595.5 669.2 590.1 651.7 21 2.14 1 FALSE 0.002586 0.05098 0.139 -250 43094 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTMTSEGGR [R].vTMTSEGGR.[G] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.6909 0 1 1 1 583.8064 1166.60552 1166.60369 1.57 0.00091 0/0 0 0 104841768 HCD 30 MS2 3.566637 599.4 15.42 44.5203 11387 11387 11384 QEplus033719.raw F4 531.3 598.6 843 555.8 420.7 646.8 163 3.17 2 FALSE 1.14E-05 5.38E-06 1.099 -250 43099 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRGPPPSWGR [R].nRGPPPSWGR.[R] N-Term(TMT6plex) 3 P84104 Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3 PE=1 SV=1 P84104-2; P84104; Q9D6W4 Isoform Short of Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3; Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3 PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf3 PE=2 SV=1 1 3 3 0.6605 0 1 1 1 451.58524 1352.74115 1352.73848 1.97 0.00089 0/0 0 0 38692876 HCD 30 MS2 10.97542 423.6 33.899 44.5248 11389 11389 11384 QEplus033719.raw F4 507.6 364 454.8 319.5 478.4 417.6 325 4.33 1 FALSE 1.14E-05 8.26E-07 1.253 -250 43121 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVESDSAK [K].dVESDSAk.[Q] N-Term(TMT6plex); K8(TMT6plex) 13 P09103 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2 P09103; Q3URP6; Q3TWE3; Q3U738; Q3TT76; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; Q3UA23; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 0 3 3 0.4706 0 1 1 1 436.90723 1308.70713 1308.70473 1.83 0.0008 0/0 0 0 23003064 HCD 30 MS2 47.39561 940.1 59.912 44.5316 11392 11392 11384 QEplus033719.raw F4 1152.1 758.8 974.6 735.9 1062.4 956.8 321 2.89 1 FALSE 0.001506 0.0224 0.262 -250 43130 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPDNPMNQR [R].sPDNPMNQR.[A] N-Term(TMT6plex) 1 Q9D8X2 Coiled-coil domain-containing protein 124 OS=Mus musculus OX=10090 GN=Ccdc124 PE=1 SV=1 Q9D8X2 Coiled-coil domain-containing protein 124 OS=Mus musculus OX=10090 GN=Ccdc124 PE=1 SV=1 0 2 2 0.6447 0 1 1 1 644.32031 1287.63335 1287.6313 1.59 0.00102 0/0 0 0 18684332 HCD 30 MS2 56.0606 862.2 76.807 44.5338 11393 11393 11384 QEplus033719.raw F4 899 819.3 954.4 684 976.9 839.5 74 2.73 1 FALSE 0.001506 0.02192 0.266 -250 43136 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDTSGDYK [K].gDTSGDYk.[K] N-Term(TMT6plex); K8(TMT6plex) 1 P48036 Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 P48036 Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 0 2 2 0.5904 0 1 1 1 650.84412 1300.68096 1300.67852 1.88 0.00122 0/0 0 0 13742060 HCD 30 MS2 50.03556 1000.5 110 44.5363 11394 11394 11384 QEplus033719.raw F4 1171.8 910.6 1185.4 725.2 1049.4 960.8 168 1.88 1 FALSE 0.003252 0.06344 0.105 -250 43166 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVPENCER [K].vVPENcER.[R] N-Term(TMT6plex); C6(Carbamidomethyl) 1 Q9Z247 Peptidyl-prolyl cis-trans isomerase FKBP9 OS=Mus musculus OX=10090 GN=Fkbp9 PE=1 SV=1 Q9Z247 Peptidyl-prolyl cis-trans isomerase FKBP9 OS=Mus musculus OX=10090 GN=Fkbp9 PE=1 SV=1 0 2 2 0.6448 0 1 1 1 616.31934 1231.6314 1231.63024 0.94 0.00058 0/0 0 0 27207890 HCD 30 MS2 2.066269 807.9 73.065 44.5507 11399 11399 11395 QEplus033719.raw F4 909.6 702.5 857.5 663.1 943.6 770.9 139 2.59 1 FALSE 0.001359 0.01942 0.286 -250 43175 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECACAGLAR [R].ecAcAGLAR.[L] N-Term(TMT6plex); C2(Carbamidomethyl); C4(Carbamidomethyl) 2 Q3USC0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Heatr3 PE=2 SV=1 Q3USC0; Q8BQM4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Heatr3 PE=2 SV=1; HEAT repeat-containing protein 3 OS=Mus musculus OX=10090 GN=Heatr3 PE=1 SV=1 0 2 2 0.619 0 1 1 1 618.80609 1236.60491 1236.60264 1.83 0.00113 0/0 0 0 14065227 HCD 30 MS2 23.4581 686.7 110 44.5554 11401 11401 11395 QEplus033719.raw F4 713.1 578.4 739 590.8 736.6 762.6 104 2.31 1 FALSE 1.14E-05 0.0002201 0.791 -250 43181 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDDSSGSIGR [K].vDDSSGSIGR.[R] N-Term(TMT6plex) 1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 0 2 2 0.5985 0 1 1 1 611.31842 1221.62956 1221.62726 1.89 0.00115 0/0 0 0 12519998 HCD 30 MS2 20.27985 544.8 110 44.558 11402 11402 11395 QEplus033719.raw F4 577.3 400 588.4 614.3 491.9 596.9 189 2.69 1 FALSE 1.14E-05 1.39E-07 1.4 -250 43188 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSTSGLDAEEARER [K].qSTSGLDAEEARER.[Q] N-Term(TMT6plex) 4 B1ARU4 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 B1ARU4; E9QA63; Q9QXZ0; E9PVY8 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 1 3 3 0.6746 0 1 1 1 593.30231 1777.89237 1777.88778 2.58 0.00153 0/0 0 0 3140137.25 HCD 30 MS2 0 271.5 110 44.5605 11403 11403 11395 QEplus033719.raw F4 292 162.3 315.8 233.8 272.2 352.7 189 5.07 1 FALSE 1.14E-05 1.37E-13 2.541 -250 43193 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVTAGK [K].gVTAGk.[I] N-Term(TMT6plex); K6(TMT6plex) 4 A0A3Q4EBK4 Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1 Q6P1B9; O08539-2; A0A3Q4EBK4; O08539 Bin1 protein OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Isoform 2 of Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1; Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1 0 2 2 0.2715 0 1 1 2 495.8219 990.63652 990.6348 1.74 0.00086 0/0 0 0 4504564 HCD 30 MS2 63.7673 897.1 110 44.5629 11404 11404 11395 QEplus033719.raw F4 1711.3 526.4 763.2 596.2 676.6 1108.9 52 1.51 1 FALSE 0.004972 0.08666 0.043 -250 43203 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DHPQQQPGMLSR [K].dHPQQQPGMLSR.[V] N-Term(TMT6plex) 1 Q9DAM7 Transmembrane protein 263 OS=Mus musculus OX=10090 GN=Tmem263 PE=1 SV=1 Q9DAM7 Transmembrane protein 263 OS=Mus musculus OX=10090 GN=Tmem263 PE=1 SV=1 0 2 2 0.6478 0 1 1 1 811.91846 1622.82964 1622.82704 1.6 0.0013 0/0 0 0 1648443.25 HCD 30 MS2 0 102.7 110 44.5655 11405 11405 11395 QEplus033719.raw F4 105.3 93.8 113.1 85.3 130 88.5 263 3.35 1 FALSE 1.14E-05 3.49E-08 1.514 -250 43213 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGSSIER [R-].mGSSIER.[MS] N-Term(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; Q9D0E1-2; Q3TQ66; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 2 2 0.2379 0 1 1 1 504.77148 1008.53569 1008.53455 1.14 0.00057 0/0 0 0 38573016 HCD 30 MS2 13.44672 899.7 37.983 44.5728 11407 11407 11406 QEplus033719.raw F4 821 935.4 1037.5 681.2 978.8 944.1 175 2.27 1 FALSE 0.00552 0.0936 0.024 -250 43214 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGSSLER [R-].mGSSLER.[MS] N-Term(TMT6plex) 1 Q8C4I7 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Fbxw9 PE=2 SV=1 0 2 2 0.2379 0 1 2 2 504.77148 1008.53569 1008.53455 1.14 0.00057 0/0 0 0 38573016 HCD 30 MS2 13.44672 899.7 37.983 44.5728 11407 11407 11406 QEplus033719.raw F4 821 935.4 1037.5 681.2 978.8 944.1 175 2.27 1 FALSE 0.00552 0.0936 0.024 -250 43265 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCSTPLCDR [K].gcSTPLcDR.[F] N-Term(TMT6plex); C2(Carbamidomethyl); C7(Carbamidomethyl) 2 Q9CZW4 Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=2 E9PUC2; Q9CZW4 Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=1; Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=2 0 2 2 0.5516 0 1 1 1 647.80847 1294.60967 1294.60812 1.19 0.00077 0/0 0 0 14082170 HCD 30 MS2 8.852703 735.7 110 44.5892 11414 11414 11406 QEplus033719.raw F4 831.7 523.1 794.9 800.3 548.2 916.2 60 3.1 1 FALSE 1.14E-05 6.39E-05 0.894 -250 43279 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDNLPNQAR [K].tDNLPNQAR.[A] N-Term(TMT6plex) 5 G3UXA6 Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1 Q8BHD7-2; G3UZ01; G3UXA6; Q8BHD7; G8JL74 Isoform 2 of Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1 0 2 2 0.6687 0 1 1 1 629.34277 1257.67827 1257.67488 2.7 0.0017 0/0 0 0 9068912 HCD 30 MS2 22.96875 623.5 110 44.594 11416 11416 11406 QEplus033719.raw F4 607 614.7 721.9 449.7 763.7 584.1 196 3.29 1 FALSE 1.14E-05 3.20E-06 1.141 -250 43297 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLEEINR [K].rLEEINR.[E] N-Term(TMT6plex) 2 A0A0A6YWH2 Allograft inflammatory factor 1-like OS=Mus musculus OX=10090 GN=Aif1l PE=1 SV=1 A0A0A6YWH2; Q9EQX4 Allograft inflammatory factor 1-like OS=Mus musculus OX=10090 GN=Aif1l PE=1 SV=1; Allograft inflammatory factor 1-like OS=Mus musculus OX=10090 GN=Aif1l PE=1 SV=1 1 3 3 0.1101 0 1 1 1 386.89774 1158.67865 1158.67924 -0.5 -0.00019 0/0 0 0 41965060 HCD 30 MS2 29.66081 569.8 28.483 44.606 11420 11420 11417 QEplus033719.raw F4 579.6 327.4 649.9 582.7 502 777.4 391 3.18 1 FALSE 0.001506 0.02248 0.261 -250 43305 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGGLAGSVR [R].qGGLAGSVR.[R] N-Term(TMT6plex) 1 Q91VJ2 Caveolae-associated protein 3 OS=Mus musculus OX=10090 GN=Cavin3 PE=1 SV=1 Q91VJ2 Caveolae-associated protein 3 OS=Mus musculus OX=10090 GN=Cavin3 PE=1 SV=1 0 2 2 0.4416 0 1 1 1 537.31799 1073.62871 1073.62647 2.08 0.00112 0/0 0 0 25697548 HCD 30 MS2 11.58913 865.1 71.186 44.6083 11421 11421 11417 QEplus033719.raw F4 878.8 862.1 955.3 625 1020.8 848.4 326 3.17 1 FALSE 3.35E-05 0.001167 0.648 -250 43328 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALCAEADR [K].aLcAEADR.[L] N-Term(TMT6plex); C3(Carbamidomethyl) 11 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" Q3URW8; B9EKJ1; E9Q447; B2RXX6; A3KGU9; Q3V1V5; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.5085 0 1 1 1 567.79181 1134.57634 1134.57747 -1 -0.00057 0/0 0 0 15358634 HCD 30 MS2 35.15188 830.6 110 44.6156 11424 11424 11417 QEplus033719.raw F4 806.4 708.3 1009.6 660.3 813.5 985.7 129 2.93 2 FALSE 1.14E-05 0.000104 0.854 -250 43340 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEGNEQMK [K].tEGNEQMk.[L] N-Term(TMT6plex); K8(TMT6plex) 4 Q8BJU0 Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=2 Q8BJU0; A0A1W2P6P1; A0A1W2P7I5; Q8BJU0-2 Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=2; Small glutamine-rich tetratricopeptide repeat-containing protein alpha (Fragment) OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=1; Small glutamine-rich tetratricopeptide repeat-containing protein alpha (Fragment) OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=1; Isoform 2 of Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus OX=10090 GN=Sgta 0 2 2 0.5559 0 1 1 1 697.87213 1394.73699 1394.73499 1.43 0.001 0/0 0 0 4083448 HCD 30 MS2 48.78374 417.9 110 44.6205 11426 11426 11417 QEplus033719.raw F4 548.4 302.6 449.3 334.9 455.3 416.7 297 2.86 1 FALSE 1.14E-05 0.0001164 0.844 -250 43352 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRVHHEPQLSDK [K].dRVHHEPQLSDk.[V] N-Term(TMT6plex); K12(TMT6plex) 8 Q6XLQ8; Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1;Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 Q3UG11; G3UY49; G3UWR0; Q6XLQ8; Q3TL33; G3UWV3; Q3TQD1; Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=1 SV=2; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 1 4 4 0.6525 0 1 1 1 480.51834 1919.05153 1919.04993 0.84 0.0004 0/0 0 0 58914196 HCD 30 MS2 24.66687 411.3 19.376 44.6323 11430 11430 11428 QEplus033719.raw F4 454.1 380.2 503.2 325.3 416.5 388.6 471 4.69 2 FALSE 1.14E-05 2.36E-05 0.977 -250 43359 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRHEIVPK [K].gRHEIVPk.[D] N-Term(TMT6plex); K8(TMT6plex) 4 Q9DCD8 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1 Q3TEL1; Q9DCD8; O70435; E0CX62 Uncharacterized protein OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1; Proteasome subunit alpha type-3 OS=Mus musculus OX=10090 GN=Psma3 PE=1 SV=3; Proteasome subunit alpha type-3 OS=Mus musculus OX=10090 GN=Psma3 PE=1 SV=2 1 3 3 0.6082 0 1 1 1 465.29471 1393.86957 1393.86799 1.14 0.00053 0/0 0 0 65923152 HCD 30 MS2 38.74416 782.8 24.198 44.6346 11431 11431 11428 QEplus033719.raw F4 783.1 719.8 837.9 656.8 929.6 769.8 332 3.19 1 FALSE 1.14E-05 0.0001227 0.84 -250 43386 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GASQAGMTGYGRPR [R].gASQAGMTGYGRPR.[Q] N-Term(TMT6plex) 1 P37804 Transgelin OS=Mus musculus OX=10090 GN=Tagln PE=1 SV=3 P37804 Transgelin OS=Mus musculus OX=10090 GN=Tagln PE=1 SV=3 0 3 3 0.8009 0 1 1 1 546.61841 1637.84067 1637.83794 1.67 0.00091 0/0 0 0 55734300 HCD 30 MS2 14.90856 412.5 22.56 44.6413 11434 11434 11428 QEplus033719.raw F4 451.9 292.6 359.8 231.3 786.3 353.1 241 6.38 1 FALSE 1.14E-05 6.31E-16 3.528 -250 43391 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRSTLGEK [K].dRSTLGEk.[L] N-Term(TMT6plex); K8(TMT6plex) 1 Q3UHW9 ADF-H domain-containing protein OS=Mus musculus OX=10090 GN=Cfl2 PE=1 SV=1 Q3UHW9 ADF-H domain-containing protein OS=Mus musculus OX=10090 GN=Cfl2 PE=1 SV=1 1 3 3 0.5271 0 1 1 1 455.27042 1363.7967 1363.79455 1.57 0.00072 0/0 0 0 37786120 HCD 30 MS2 26.46747 813.8 38.277 44.6436 11435 11435 11428 QEplus033719.raw F4 1040.4 429.9 794 989 708 921.5 422 3.32 1 FALSE 0.0006294 0.009536 0.412 -250 43422 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QACEGNLPR [K].qAcEGNLPR.[G] N-Term(TMT6plex); C3(Carbamidomethyl) 3 P53995 Anaphase-promoting complex subunit 1 OS=Mus musculus OX=10090 GN=Anapc1 PE=1 SV=2 P53995; A2ATQ5; B7ZNX2 Anaphase-promoting complex subunit 1 OS=Mus musculus OX=10090 GN=Anapc1 PE=1 SV=2; Anaphase-promoting complex subunit 1 OS=Mus musculus OX=10090 GN=Anapc1 PE=1 SV=1; Anaphase-promoting complex subunit 1 OS=Mus musculus OX=10090 GN=Anapc1 PE=2 SV=1 0 2 2 0.5443 0 1 1 1 637.33014 1273.653 1273.65204 0.76 0.00048 0/0 0 0 3679206.75 HCD 30 MS2 0 328.6 110 44.6604 11441 11441 11439 QEplus033719.raw F4 333.9 301.3 355.9 235.2 412 333.4 130 3.16 1 FALSE 1.14E-05 2.54E-05 0.97 -250 43430 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YIGESAR [K].yIGESAR.[L] N-Term(TMT6plex) 2 P62334 26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=1 Q8QZS9; P62334 Psmc6 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc6 PE=2 SV=1; 26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=1 0 2 2 0.3688 0 1 1 1 512.7851 1024.56291 1024.56248 0.43 0.00022 0/0 0 0 98537568 HCD 30 MS2 18.43631 623.4 10.861 44.6627 11442 11442 11439 QEplus033719.raw F4 596.2 521.8 700.2 618.4 611.3 692.6 109 2.63 1 FALSE 0.0009075 0.01263 0.364 -250 43440 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSNSYLR [K].tSNSYLR.[K] N-Term(TMT6plex) 4 P22892 AP-1 complex subunit gamma-1 OS=Mus musculus OX=10090 GN=Ap1g1 PE=1 SV=3 Q8CC03; Q8CBB7; Q3UKX8; P22892 GAE domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ap1g1 PE=2 SV=1; AP-1 complex subunit gamma OS=Mus musculus OX=10090 GN=Ap1g1 PE=1 SV=1; AP-1 complex subunit gamma OS=Mus musculus OX=10090 GN=Ap1g1 PE=2 SV=1; AP-1 complex subunit gamma-1 OS=Mus musculus OX=10090 GN=Ap1g1 PE=1 SV=3 0 2 2 0.4978 0 1 1 1 535.29633 1069.58537 1069.58394 1.34 0.00072 0/0 0 0 18958244 HCD 30 MS2 26.41064 760.9 83.822 44.6672 11444 11444 11439 QEplus033719.raw F4 817.2 656.4 827 601.7 872.3 790.6 121 2.29 1 FALSE 0.0003496 0.006649 0.465 -250 43458 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TASTNSIAQAR [K].tASTNSIAQAR.[R] N-Term(TMT6plex) 3 A0A0N4SW28 Guanine nucleotide-binding protein subunit gamma OS=Mus musculus OX=10090 GN=Gng12 PE=1 SV=1 A0A0N4SW28; A0A0N4SVT3; Q9DAS9 Guanine nucleotide-binding protein subunit gamma OS=Mus musculus OX=10090 GN=Gng12 PE=1 SV=1; Guanine nucleotide-binding protein subunit gamma (Fragment) OS=Mus musculus OX=10090 GN=Gng12 PE=1 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 OS=Mus musculus OX=10090 GN=Gng12 PE=1 SV=3 0 2 2 0.6738 0 1 1 1 674.87366 1348.74004 1348.73821 1.36 0.00092 0/0 0 0 12114727 HCD 30 MS2 5.823255 460.3 110 44.6722 11446 11446 11439 QEplus033719.raw F4 464.3 458 533.1 412.6 461.1 433 343 4.2 1 FALSE 1.14E-05 3.83E-10 1.886 -250 43474 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DEVAHTVTESR [K].dEVAHTVTESR.[V] N-Term(TMT6plex) 5 Q3TY95 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1 F8WHG5; Q8CE74; D3Z3N2; D3YXM7; Q3TY95 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Akt2 PE=2 SV=1; RAC-beta serine/threonine-protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1; RAC-beta serine/threonine-protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1 0 3 3 0.7429 0 1 1 1 491.59042 1472.75672 1472.75425 1.67 0.00082 0/0 0 0 11019965 HCD 30 MS2 52.94533 716.8 110 44.6772 11448 11448 11439 QEplus033719.raw F4 754.7 531.6 715.1 719.5 749 831 180 3.85 1 FALSE 1.14E-05 4.49E-05 0.923 -250 43478 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEELAAR [K].aEELAAR.[Q] N-Term(TMT6plex) 2 A0A498WFS2 UBX domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ubxn1 PE=1 SV=1 A0A498WFS2; Q922Y1 UBX domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ubxn1 PE=1 SV=1; UBX domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ubxn1 PE=1 SV=1 0 2 2 0.0746 0 1 1 1 494.78397 988.56066 988.56248 -1.84 -0.00091 0/0 0 0 10099361 HCD 30 MS2 47.23528 1079.1 110 44.6797 11449 11449 11439 QEplus033719.raw F4 1151.3 909.8 1115.4 883.3 1224.7 1190 253 2.28 1 FALSE 0.001125 0.01485 0.334 -250 43487 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRVHHEPQLSDK [K].dRVHHEPQLSDk.[V] N-Term(TMT6plex); K12(TMT6plex) 8 Q6XLQ8; Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1;Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 Q3UG11; G3UY49; G3UWR0; Q6XLQ8; Q3TL33; G3UWV3; Q3TQD1; Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=1 SV=2; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 1 3 3 0.6784 0 1 1 1 640.35516 1919.05094 1919.04993 0.53 0.00034 0/0 0 0 9217247 HCD 30 MS2 25.26909 346 110 44.687 11451 11451 11450 QEplus033719.raw F4 347.1 307.4 467.3 261 379.3 314.1 475 4.26 2 FALSE 1.14E-05 1.86E-12 2.326 -250 43495 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVISPDTRR [K].eVISPDTRR.[F] N-Term(TMT6plex) 4 Q9DCN2 NADH-cytochrome b5 reductase 3 OS=Mus musculus OX=10090 GN=Cyb5r3 PE=1 SV=3 Q9DCN2-2; Q9DCN2; Q9CY59; F2Z456 Isoform 2 of NADH-cytochrome b5 reductase 3 OS=Mus musculus OX=10090 GN=Cyb5r3; NADH-cytochrome b5 reductase 3 OS=Mus musculus OX=10090 GN=Cyb5r3 PE=1 SV=3; NADH-cytochrome b5 reductase OS=Mus musculus OX=10090 GN=Cyb5r3 PE=2 SV=1; NADH-cytochrome b5 reductase OS=Mus musculus OX=10090 GN=Cyb5r3 PE=1 SV=1 1 3 3 0.4095 0 1 1 1 434.58429 1301.73832 1301.73748 0.64 0.00028 0/0 0 0 112907360 HCD 30 MS2 9.437374 323.6 10.058 44.6915 11453 11453 11450 QEplus033719.raw F4 344.5 248.1 342.4 335.7 311.9 358.9 374 3.98 1 FALSE 1.14E-05 1.32E-08 1.594 -250 43522 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLREDGEK [KR].nLREDGEk.[A] N-Term(TMT6plex); K8(TMT6plex) 6 Q9DC51; P08752 Guanine nucleotide-binding protein G(i) subunit alpha-3 OS=Mus musculus OX=10090 GN=Gnai3 PE=1 SV=3;Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Mus musculus OX=10090 GN=Gnai2 PE=1 SV=5 A0A0A6YXC2; Q9DC51; Q3TJH1; A0A0A6YXN0; P08752; B2RSH2 Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Mus musculus OX=10090 GN=Gnai2 PE=1 SV=1; Guanine nucleotide-binding protein G(i) subunit alpha-3 OS=Mus musculus OX=10090 GN=Gnai3 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Gnai3 PE=2 SV=1; Guanine nucleotide-binding protein G(i) subunit alpha-2 (Fragment) OS=Mus musculus OX=10090 GN=Gnai2 PE=1 SV=1; Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Mus musculus OX=10090 GN=Gnai2 PE=1 SV=5; Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Mus musculus OX=10090 GN=Gnai1 PE=1 SV=1 1 2 2 0.242 0 1 1 1 709.90485 1418.80242 1418.80036 1.45 0.00103 0/0 0 0 4746931 HCD 30 MS2 32.09702 333.4 110 44.7011 11457 11457 11450 QEplus033719.raw F4 345.5 272.6 339.6 297.1 442.3 303.5 481 1.57 2 FALSE 0.002981 0.05787 0.12 -250 43527 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVPSEAPR [R].aVPSEAPR.[E] N-Term(TMT6plex) 4 B2RQ68 Luzp1 protein OS=Mus musculus OX=10090 GN=Luzp1 PE=2 SV=1 Q8R4U7; B2RQ68; Q6KAP6; B7ZW89 Leucine zipper protein 1 OS=Mus musculus OX=10090 GN=Luzp1 PE=1 SV=2; Luzp1 protein OS=Mus musculus OX=10090 GN=Luzp1 PE=2 SV=1; MFLJ00226 protein (Fragment) OS=Mus musculus OX=10090 GN=mFLJ00226 PE=4 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Luzp1 PE=2 SV=1 0 2 2 0.3696 0 1 1 1 528.3067 1055.60613 1055.60467 1.38 0.00073 0/0 0 0 14611388 HCD 30 MS2 15.98146 755.3 110 44.7036 11458 11458 11450 QEplus033719.raw F4 815.6 632.3 805.6 530.8 891.7 856.1 141 2.76 1 FALSE 0.003575 0.06844 0.092 -250 43533 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMQPTHPIR [K].eMQPTHPIR.[L] N-Term(TMT6plex) 6 P68254; Q9CQV8; P63101 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq PE=1 SV=1;14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3;14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 P68254; Q9CQV8-2; Q9CQV8; Q3UA58; P68254-2; P63101 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq PE=1 SV=1; Isoform Short of 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab; 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3; 14_3_3 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=2 SV=1; Isoform 2 of 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq; 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 0 2 2 0.6324 0 1 1 1 669.36377 1337.72026 1337.71972 0.4 0.00027 0/0 0 0 5050332.5 HCD 30 MS2 0 273.9 110 44.7061 11459 11459 11450 QEplus033719.raw F4 303.4 264.2 285 206.6 322.7 261.3 301 3.4 3 FALSE 1.14E-05 1.26E-06 1.218 -250 43538 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTQSGQMSGEGK [K].tTQSGQMSGEGk.[A] N-Term(TMT6plex); K12(TMT6plex) 3 Q6NVF9 Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1 Q6NVF9; H3BJ30; H3BJW3 Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1; Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1; Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1 0 2 2 0.8 0 1 1 1 834.93604 1668.86479 1668.86271 1.25 0.00104 0/0 0 0 5036476.5 HCD 30 MS2 14.50951 256.6 110 44.7086 11460 11460 11450 QEplus033719.raw F4 283.8 252 262.2 175.1 345.4 221.1 235 5 1 FALSE 1.14E-05 2.52E-12 2.301 -250 43549 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDQPPQAK [K].tDQPPQAk.[K] N-Term(TMT6plex); K8(TMT6plex) 4 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 0 2 2 0.4894 0 1 1 1 671.89081 1342.77434 1342.77309 0.93 0.00063 0/0 0 0 3348200 HCD 30 MS2 51.44555 358.2 110 44.7184 11463 11463 11461 QEplus033719.raw F4 421.2 286.6 356.2 346.8 401.1 337.4 351 2.82 1 FALSE 0.001074 0.01388 0.347 -250 43559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMQPTHPIR [K].eMQPTHPIR.[L] N-Term(TMT6plex) 6 P68254; Q9CQV8; P63101 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq PE=1 SV=1;14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3;14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 P68254; Q9CQV8-2; Q9CQV8; Q3UA58; P68254-2; P63101 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq PE=1 SV=1; Isoform Short of 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab; 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3; 14_3_3 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=2 SV=1; Isoform 2 of 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq; 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 0 3 3 0.5198 0 1 1 1 446.57843 1337.72074 1337.71972 0.76 0.00034 0/0 0 0 86170968 HCD 30 MS2 15.36362 324.2 14.205 44.7207 11464 11464 11461 QEplus033719.raw F4 338.1 280.3 344.9 278.4 374.4 329 299 4.04 3 FALSE 1.14E-05 1.04E-05 1.044 -250 43563 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLRPAVER [K].sLRPAVER.[L] N-Term(TMT6plex) 16 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 F6XCT0; Q9QXZ0-3; B1ARU4; F6SHS0; E9QA63; E9QNP1; Q3UPG9; Q5DTZ2; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; Q9QXZ0; A0A0A0MQA6; A0A571BF93; E9PVY8 Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; MKIAA1251 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 3 3 0.524 0 1 1 1 386.23837 1156.70057 1156.69997 0.51 0.0002 0/0 0 0 31028680 HCD 30 MS2 63.09488 407.9 28.203 44.723 11465 11465 11461 QEplus033719.raw F4 425.4 233.6 468.9 398.5 357.3 563.8 248 3.13 3 FALSE 0.0007056 0.01024 0.4 -250 43568 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVISPDTRR [K].eVISPDTRR.[F] N-Term(TMT6plex) 4 Q9DCN2 NADH-cytochrome b5 reductase 3 OS=Mus musculus OX=10090 GN=Cyb5r3 PE=1 SV=3 Q9DCN2-2; Q9DCN2; Q9CY59; F2Z456 Isoform 2 of NADH-cytochrome b5 reductase 3 OS=Mus musculus OX=10090 GN=Cyb5r3; NADH-cytochrome b5 reductase 3 OS=Mus musculus OX=10090 GN=Cyb5r3 PE=1 SV=3; NADH-cytochrome b5 reductase OS=Mus musculus OX=10090 GN=Cyb5r3 PE=2 SV=1; NADH-cytochrome b5 reductase OS=Mus musculus OX=10090 GN=Cyb5r3 PE=1 SV=1 1 2 2 0.4127 0 1 1 1 651.37286 1301.73845 1301.73748 0.75 0.00049 0/0 0 0 12748777 HCD 30 MS2 36.15033 535.7 110 44.7255 11466 11466 11461 QEplus033719.raw F4 548.9 435.9 568.9 456.7 675.5 528.5 379 3.15 1 FALSE 0.0003408 0.006573 0.467 -250 43573 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LMQDDNR [R].lMQDDNR.[G] N-Term(TMT6plex) 4 P27046 Alpha-mannosidase 2 OS=Mus musculus OX=10090 GN=Man2a1 PE=1 SV=2 Q7TPQ0; F6QMB7; Q197W7; P27046 Man2a2 protein OS=Mus musculus OX=10090 GN=Man2a2 PE=2 SV=1; Alpha-mannosidase 2 (Fragment) OS=Mus musculus OX=10090 GN=Man2a1 PE=1 SV=1; Alpha-mannosidase OS=Mus musculus OX=10090 GN=Man2a2 PE=2 SV=1; Alpha-mannosidase 2 OS=Mus musculus OX=10090 GN=Man2a1 PE=1 SV=2 0 2 2 0.6724 0 1 1 1 560.78503 1120.56279 1120.56182 0.86 0.00048 0/0 0 0 5943127.5 HCD 30 MS2 25.33869 576.5 110 44.728 11467 11467 11461 QEplus033719.raw F4 533.5 505 587.1 472.9 758.7 602.1 112 2.9 1 FALSE 0.0008445 0.01159 0.379 -250 43579 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DANNPAENGDAK [K].dANNPAENGDAk.[TR] N-Term(TMT6plex); K12(TMT6plex) 7 Q5XK38 Hmgn2 protein OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1 Q5XK38; A3KGL9; Q58E57; A0A087WR34; F6W687; Q5BL14; B7ZCQ3 "Hmgn2 protein OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; Non-histone chromosomal protein HMG-17 OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; High mobility group nucleosomal binding domain 2 OS=Mus musculus OX=10090 GN=Hmgn2 PE=2 SV=1; Predicted gene, 20379 (Fragment) OS=Mus musculus OX=10090 GN=Gm20379 PE=3 SV=1; Non-histone chromosomal protein HMG-17 (Fragment) OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; High mobility group nucleosomal binding domain 2 OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1; Non-histone chromosomal protein HMG-17 OS=Mus musculus OX=10090 GN=Hmgn2 PE=1 SV=1" 0 3 3 0.7883 0 1 1 1 558.62177 1673.85074 1673.8495 0.74 0.00041 0/0 0 0 50029476 HCD 30 MS2 0.8375096 537 30.279 44.7325 11469 11469 11461 QEplus033719.raw F4 534.9 495.9 458.1 368.9 886.8 477.1 200 3.59 1 FALSE 1.14E-05 3.02E-06 1.146 -250 43586 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETVEEQASTTER [K].eTVEEQASTTER.[V] N-Term(TMT6plex) 4 A2A432 Cullin-4B OS=Mus musculus OX=10090 GN=Cul4b PE=1 SV=1 A2A432-2; A2A432; Q3TP81; E9PXY1 Isoform 2 of Cullin-4B OS=Mus musculus OX=10090 GN=Cul4b; Cullin-4B OS=Mus musculus OX=10090 GN=Cul4b PE=1 SV=1; Cullin_Nedd8 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Cul4b PE=2 SV=1; Cullin-4B OS=Mus musculus OX=10090 GN=Cul4b PE=1 SV=2 0 2 2 0.7722 0 1 1 1 804.89984 1608.79241 1608.79142 0.61 0.00049 0/0 0 0 7342901 HCD 30 MS2 0 175.4 110 44.735 11470 11470 11461 QEplus033719.raw F4 166.3 181.9 195.8 132 206.2 170.1 121 3.95 1 FALSE 1.14E-05 3.16E-10 1.902 -250 43607 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSVPGVR [R].sSVPGVR.[L] N-Term(TMT6plex) 10 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; Q3TWV0; A2AKJ2; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.0517 0 1 1 1 465.78336 930.55943 930.557 2.62 0.00122 0/0 0 0 60276380 HCD 30 MS2 33.17953 635.8 21.254 44.7518 11476 11476 11472 QEplus033719.raw F4 605 661.5 662.8 426.7 874.4 584.5 333 1.74 2 FALSE 0.003182 0.06269 0.107 -250 43625 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIMEGSGR [K].aIMEGSGR.[I] N-Term(TMT6plex) 4 A0A571BEN1 "Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1" A0A571BEN1; Q6P6L5; F6RQD1; D3YU50 "Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1; Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1; Myosin-binding protein C, slow-type (Fragment) OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1; Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1" 0 2 2 0.5831 0 1 1 1 525.28455 1049.56182 1049.5611 0.69 0.00036 0/0 0 0 16880498 HCD 30 MS2 23.33149 1057.2 110 44.7588 11479 11479 11472 QEplus033719.raw F4 1290.1 388.1 732.3 1960.1 479 1493.9 196 2.95 1 FALSE 1.14E-05 0.000736 0.689 -250 43644 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQQFHK [K].nQQFHk.[E] N-Term(TMT6plex); K6(TMT6plex) 6 Q3TMM5; Q3UM20 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1 Q3TMM5; Q3TTV7; Q3TFC2; Q3UM20; Q3TF40; Q99K48 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Non-POU domain-containing octamer-binding protein OS=Mus musculus OX=10090 GN=Nono PE=1 SV=3 0 3 3 0.3232 0 1 1 1 420.58054 1259.72705 1259.72608 0.78 0.00033 0/0 0 0 9419979 HCD 30 MS2 47.56956 900.3 91.945 44.7633 11481 11481 11472 QEplus033719.raw F4 1582.5 499.4 800.3 808.6 989.5 721.4 406 2.97 2 FALSE 0.001318 0.01811 0.298 -250 43650 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTAPGGSASAGTK [K].tTAPGGSASAGTk.[N] N-Term(TMT6plex); K13(TMT6plex) 7 A2AGT5 Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5 PE=1 SV=1 A2AGT5; Z4YL78; A2AGT5-3; A2AGT5-2; A0A0R4J0K2; Q80U79; K3W4R5 Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5 PE=1 SV=1; Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5 PE=1 SV=1; Isoform 3 of Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5; Isoform 2 of Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5; Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5 PE=1 SV=1; MKIAA0097 protein (Fragment) OS=Mus musculus OX=10090 GN=Ckap5 PE=2 SV=1; Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5 PE=1 SV=1 0 2 2 0.6238 0 1 1 1 782.44116 1563.87505 1563.87426 0.51 0.0004 0/0 0 0 5746240.5 HCD 30 MS2 0 216.7 110 44.7659 11482 11482 11472 QEplus033719.raw F4 222.6 167.3 220.8 164.5 319.5 205.6 433 4.2 1 FALSE 1.14E-05 4.47E-14 2.633 -250 43668 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHPYDAAK [K].eHPYDAAk.[D] N-Term(TMT6plex); K8(TMT6plex) 3 Q9D1K2 V-type proton ATPase subunit F OS=Mus musculus OX=10090 GN=Atp6v1f PE=1 SV=2 Q9D1K2; A0A0N4SVE1; F7B2B4 V-type proton ATPase subunit F OS=Mus musculus OX=10090 GN=Atp6v1f PE=1 SV=2; V-ATPase 14 kDa subunit OS=Mus musculus OX=10090 GN=Atp6v1f PE=1 SV=1; V-ATPase 14 kDa subunit (Fragment) OS=Mus musculus OX=10090 GN=Atp6v1f PE=1 SV=1 0 3 3 0.2594 0 1 1 1 463.59338 1388.7656 1388.75744 5.88 0.00272 0/0 0 0 3034328 HCD 30 MS2 54.7994 575.5 110 44.7757 11485 11485 11483 QEplus033719.raw F4 615.4 434.5 588.3 553.2 661.1 600.6 356 2.66 1 FALSE 0.001473 0.02147 0.269 -250 43676 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGAETFADHR [R].eGAETFADHR.[E] N-Term(TMT6plex) 5 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q0V930; Q3UHS6; Q3TBC3; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 3 3 0.7188 0 1 1 1 454.56006 1361.66562 1361.66471 0.67 0.0003 0/0 0 0 80916288 HCD 30 MS2 9.695931 322.3 17.122 44.7802 11487 11487 11483 QEplus033719.raw F4 336.9 248.9 360.3 326.2 351.9 309.5 92 3.77 1 FALSE 1.14E-05 1.09E-07 1.42 -250 43678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HPEAEMAQNSVR [R].hPEAEMAQNSVR.[L] N-Term(TMT6plex) 1 Q02257 Junction plakoglobin OS=Mus musculus OX=10090 GN=Jup PE=1 SV=3 Q02257 Junction plakoglobin OS=Mus musculus OX=10090 GN=Jup PE=1 SV=3 0 3 3 0.8079 0 1 1 1 533.27075 1597.7977 1597.79541 1.44 0.00077 0/0 0 0 15461978 HCD 30 MS2 15.35425 380 110 44.7849 11489 11489 11483 QEplus033719.raw F4 382 325.5 407.2 309.3 444.8 411 176 5.31 1 FALSE 1.14E-05 5.28E-10 1.86 -250 43699 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGAPATQAQK [K].aGAPATQAQk.[G] N-Term(TMT6plex); K10(TMT6plex) 7 O08784 Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 H3BIX0; Q05BH6; F6R3V4; O08784; Q7TPZ2; Q6PFZ6; H3BL37 Treacle protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Tcof1 protein OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 0 2 2 0.3909 0 1 1 1 700.91846 1400.82964 1400.82618 2.47 0.00173 0/0 0 0 7046867.5 HCD 30 MS2 0 355.8 110 44.7922 11492 11492 11483 QEplus033719.raw F4 392.9 339.3 362.4 278.8 464.9 296.4 310 3.94 1 FALSE 1.14E-05 1.83E-08 1.567 -250 43707 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSTVSAPVSR [R].sSTVSAPVSR.[A] N-Term(TMT6plex) 2 A0A4Y5WWJ7 Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1 A0A4Y5WWJ7; F6ZGN3 Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1; Unconventional myosin-XVIIIa (Fragment) OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=2 0 2 2 0.5823 0 1 1 1 610.34668 1219.68608 1219.68438 1.39 0.00085 0/0 0 0 5779146.5 HCD 30 MS2 58.0373 697.6 110 44.7947 11493 11493 11483 QEplus033719.raw F4 1172.1 383.3 798.1 662.8 306.8 862.7 400 2.49 1 FALSE 1.14E-05 6.86E-06 1.079 -250 43723 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNRPGYAGAPK [K].gNRPGYAGAPk.[G] N-Term(TMT6plex); K11(TMT6plex) 5 P32067 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 P32067; Q3TG93; Q9CYB9; Q8BTU4; F6SXM5 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; HTH La-type RNA-binding domain-containing protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Lupus La protein homolog (Fragment) OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 0 3 3 0.6006 0 1 1 1 515.96863 1545.89133 1545.89018 0.74 0.00038 0/0 0 0 36289328 HCD 30 MS2 7.216697 1032.4 50.587 44.809 11498 11498 11494 QEplus033719.raw F4 1050 1022.1 1153.8 737.4 1288.6 942.2 426 3.38 1 FALSE 1.14E-05 2.80E-06 1.152 -250 43729 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGAPATQAQK [K].aGAPATQAQk.[G] N-Term(TMT6plex); K10(TMT6plex) 7 O08784 Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 H3BIX0; Q05BH6; F6R3V4; O08784; Q7TPZ2; Q6PFZ6; H3BL37 Treacle protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Tcof1 protein OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 0 3 3 0.6126 0 1 1 1 467.61453 1400.82904 1400.82618 2.04 0.00095 0/0 0 0 11784502 HCD 30 MS2 24.334 656.3 110 44.8115 11499 11499 11494 QEplus033719.raw F4 741.1 574.1 633.6 533.5 807.8 647.8 308 3.82 1 FALSE 1.14E-05 1.81E-06 1.188 -250 43734 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTAPGGSASAGTK [K].tTAPGGSASAGTk.[N] N-Term(TMT6plex); K13(TMT6plex) 7 A2AGT5 Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5 PE=1 SV=1 A2AGT5; Z4YL78; A2AGT5-3; A2AGT5-2; A0A0R4J0K2; Q80U79; K3W4R5 Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5 PE=1 SV=1; Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5 PE=1 SV=1; Isoform 3 of Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5; Isoform 2 of Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5; Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5 PE=1 SV=1; MKIAA0097 protein (Fragment) OS=Mus musculus OX=10090 GN=Ckap5 PE=2 SV=1; Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5 PE=1 SV=1 0 3 3 0.5765 0 1 1 1 521.96387 1563.87705 1563.87426 1.79 0.00093 0/0 0 0 6536036 HCD 30 MS2 41.31821 552.1 110 44.814 11500 11500 11494 QEplus033719.raw F4 598 405.6 651.2 468.8 612.3 576.4 427 3.4 1 FALSE 1.14E-05 9.29E-06 1.053 -250 43741 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVSDEK [K].dVSDEk.[L] N-Term(TMT6plex); K6(TMT6plex) 2 Q9CZU6 "Citrate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Cs PE=1 SV=1" Q0QEL9; Q9CZU6 "Citrate synthase (Fragment) OS=Mus musculus OX=10090 GN=Cs PE=2 SV=1; Citrate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Cs PE=1 SV=1" 0 2 2 0.1607 0 1 1 1 575.82172 1150.63616 1150.63559 0.49 0.00028 0/0 0 0 5399753 HCD 30 MS2 25.50266 654.1 110 44.8165 11501 11501 11494 QEplus033719.raw F4 1008.8 443.7 673.2 419.4 507.2 872.6 260 2.24 1 FALSE 0.002233 0.04303 0.164 -250 43750 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGGGGGGGLGSGGSIR [R].sGGGGGGGLGSGGSIR.[S] N-Term(TMT6plex) 1 P35527 "SWISS-PROT:P35527 Tax_Id=9606 Gene_Symbol=KRT9 Keratin, type I cytoskeletal 9" P35527 "SWISS-PROT:P35527 Tax_Id=9606 Gene_Symbol=KRT9 Keratin, type I cytoskeletal 9" 0 2 2 0.7187 0 1 1 1 731.38507 1461.76286 1461.76073 1.46 0.00107 0/0 0 0 9091075 HCD 30 MS2 0 282.3 110 44.819 11502 11502 11494 QEplus033719.raw F4 281.3 310.7 186.8 318.1 302.6 294 248 5.51 1 TRUE 1.14E-05 6.31E-16 3.694 -250 43764 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQSSDTEQPSPTSGGGK [R].sQSSDTEQPSPTSGGGk.[V] N-Term(TMT6plex); K17(TMT6plex) 6 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; Q3TSY9; Q3UGC0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 0 2 2 0.8912 0 1 1 1 1054.53015 2108.05303 2108.05078 1.07 0.00112 0/0 0 0 3938098.5 HCD 30 MS2 0 198.7 110 44.8241 11504 11504 11494 QEplus033719.raw F4 205.1 179.4 226.8 152.6 228.2 200.3 203 6.25 1 FALSE 1.14E-05 6.31E-16 3.603 -250 43769 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQNDAGVR [K].iQNDAGVR.[I] N-Term(TMT6plex) 15 A2AJ72; Q3U0V1; A0A0G2JFY5 Far upstream element (FUSE)-binding protein 3 OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1;Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2;Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1 A2AJ72; A0A0A6YVV5; Q3U0V1; A0A0G2JFY5; Q91WJ8-2; Q3TIX6; A0A0G2JGW9; A0A3B2WCD8; Q0P6B2; A0A0G2JG00; A0A3B2W465; Q3TUE1; Q91WJ8; Q3UUU2; Q3ULP9 Far upstream element (FUSE)-binding protein 3 OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1; Far upstream element (FUSE)-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1; Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Isoform 2 of Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1; Far upstream element (FUSE)-binding protein 3 OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=1; Far upstream element (FUSE) binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=2 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fubp3 PE=2 SV=1 0 2 2 0.3733 0 1 1 1 551.31573 1101.62419 1101.62139 2.55 0.0014 0/0 0 0 33480988 HCD 30 MS2 63.6012 714.6 23.744 44.8314 11506 11506 11505 QEplus033719.raw F4 1093.7 553.9 708.1 519 726.6 686.6 271 2.25 3 FALSE 2.26E-05 0.0009735 0.664 -250 43776 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHDLGHMMR [K].qHDLGHMMR.[C] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.7012 0 1 1 1 677.33972 1353.67217 1353.67173 0.33 0.00022 0/0 0 0 8040644.5 HCD 30 MS2 22.4178 336 110 44.8339 11507 11507 11505 QEplus033719.raw F4 333 308.2 417.6 360.1 253.5 343.5 138 3.38 3 FALSE 1.14E-05 1.75E-05 1.001 -250 43783 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHDLGHMMR [K].qHDLGHMMR.[C] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.7878 0 1 1 1 451.89554 1353.67206 1353.67173 0.25 0.00011 0/0 0 0 48258656 HCD 30 MS2 46.61452 348.9 19.465 44.8384 11509 11509 11505 QEplus033719.raw F4 349.6 319.9 393.4 310 347.8 372.5 137 4.43 3 FALSE 1.14E-05 7.68E-07 1.259 -250 43791 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTCTDTLTR [R].tTcTDTLTR.[H] N-Term(TMT6plex); C3(Carbamidomethyl) 2 Q8K4Q8 Collectin-12 OS=Mus musculus OX=10090 GN=Colec12 PE=1 SV=1 Q8K4Q8; A0A452J8C7 Collectin-12 OS=Mus musculus OX=10090 GN=Colec12 PE=1 SV=1; Collectin-12 OS=Mus musculus OX=10090 GN=Colec12 PE=1 SV=1 0 2 2 0.6778 0 1 1 1 649.33472 1297.66216 1297.66193 0.17 0.00011 0/0 0 0 19531648 HCD 30 MS2 10.91954 642.3 96.975 44.8407 11510 11510 11505 QEplus033719.raw F4 542.8 784.6 946.4 434.3 578.6 567.2 164 3.29 1 FALSE 1.14E-05 4.36E-06 1.116 -250 43798 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGEDYEGGGCR [R].vGEDYEGGGcR.[F] N-Term(TMT6plex); C10(Carbamidomethyl) 3 Q3UE11 Procollagen-lysine 5-dioxygenase OS=Mus musculus OX=10090 PE=2 SV=1 Q3UE11; Q9R0E2; Q91Z26 "Procollagen-lysine 5-dioxygenase OS=Mus musculus OX=10090 PE=2 SV=1; Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Mus musculus OX=10090 GN=Plod1 PE=1 SV=1; Plod1 protein OS=Mus musculus OX=10090 GN=Plod1 PE=2 SV=1" 0 2 2 0.6461 0 1 1 1 714.3255 1427.64372 1427.64226 1.03 0.00073 0/0 0 0 11869082 HCD 30 MS2 21.59084 372.9 110 44.8432 11511 11511 11505 QEplus033719.raw F4 358.5 334.5 389.1 354.3 415.3 386 21 3.56 1 FALSE 1.14E-05 3.74E-08 1.508 -250 43803 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTVQTEEKPR [K].gTVQTEEkPR.[E] N-Term(TMT6plex); K8(TMT6plex) 3 P27546 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 P27546; P27546-2; P27546-3 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 0 3 3 0.487 0 1 1 1 534.97882 1602.92191 1602.92154 0.23 0.00012 0/0 0 0 10246313 HCD 30 MS2 7.772029 740.1 110 44.8457 11512 11512 11505 QEplus033719.raw F4 815 506.5 732 651.8 852.1 883.5 431 4.23 1 FALSE 1.14E-05 8.85E-08 1.437 -250 43811 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPAAAPASTPAQR [R].tPAAAPASTPAQR.[A] N-Term(TMT6plex) 4 Q3TN28 Uncharacterized protein OS=Mus musculus OX=10090 GN=Xrcc1 PE=2 SV=1 Q3TN28; Q60596; Q3U2B4; Q3TGI0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Xrcc1 PE=2 SV=1; DNA repair protein XRCC1 OS=Mus musculus OX=10090 GN=Xrcc1 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Xrcc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Xrcc1 PE=2 SV=1 0 2 2 0.7291 0 1 1 1 734.40863 1467.80998 1467.81171 -1.17 -0.00086 0/0 0 0 4072271 HCD 30 MS2 0 192.1 110 44.8507 11514 11514 11505 QEplus033719.raw F4 176 172.2 183.3 141.8 299.6 179.9 328 3.47 1 FALSE 1.14E-05 5.96E-07 1.28 -250 43814 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGGSAAPTQPK [K].aGGSAAPTQPk.[R] N-Term(TMT6plex); K11(TMT6plex) 1 Q80ZM5 "H1 histone family, member X OS=Mus musculus OX=10090 GN=H1f10 PE=1 SV=1" Q80ZM5 "H1 histone family, member X OS=Mus musculus OX=10090 GN=H1f10 PE=1 SV=1" 0 2 2 0.7088 0 1 1 1 721.92316 1442.83904 1442.83675 1.59 0.00114 0/0 0 0 3683462.5 HCD 30 MS2 0 264.7 110 44.8532 11515 11515 11505 QEplus033719.raw F4 253.2 326.6 218.2 135.6 473.3 181.3 397 3.4 1 FALSE 1.14E-05 6.56E-10 1.842 -250 43822 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQEVATNANYR [K].sQEVATNANYR.[N] N-Term(TMT6plex) 5 A0A571BF58; Q61953 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1;Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1 E9Q1W3; A0A571BF58; Q61953; A0A571BF46; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 2 2 0.7797 0 1 1 1 741.38171 1481.75615 1481.75459 1.06 0.00078 0/0 0 0 3527211.75 HCD 30 MS2 0 186.7 110 44.863 11518 11518 11516 QEplus033719.raw F4 223 53.4 171.9 310.1 72.9 289 201 4.04 2 FALSE 1.14E-05 3.76E-07 1.318 -250 43830 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQQFHK [K].nQQFHk.[E] N-Term(TMT6plex); K6(TMT6plex) 6 Q3TMM5; Q3UM20 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1 Q3TMM5; Q3TTV7; Q3TFC2; Q3UM20; Q3TF40; Q99K48 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Non-POU domain-containing octamer-binding protein OS=Mus musculus OX=10090 GN=Nono PE=1 SV=3 0 3 3 0.4513 0 1 1 1 420.57837 1259.72055 1259.72608 -4.38 -0.00184 0/0 0 0 70747808 HCD 30 MS2 8.783497 616.5 14.906 44.8653 11519 11519 11516 QEplus033719.raw F4 1193.6 138.6 226 793.1 1185.5 162.2 331 2.26 2 FALSE 0.002413 0.04753 0.15 -250 43836 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AASLTEDR [K].aASLTEDR.[G] N-Term(TMT6plex) 9 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 Q8R2V4; Q6NZJ6-2; E9Q9E1; Q6PD42; E9PVC5; E9PVC6; A0A0J9YUS5; Q6NZJ6; Q8K0J8 Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 0 2 2 0.5674 0 1 1 1 546.29919 1091.59111 1091.58942 1.55 0.00085 0/0 0 0 42624080 HCD 30 MS2 14.4296 625.2 30.618 44.8675 11520 11520 11516 QEplus033719.raw F4 626.4 444.2 704.5 422.8 798.1 755 244 3.19 1 FALSE 1.14E-05 4.55E-05 0.922 -250 43862 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQGVMVGMGQK [R-].hQGVmVGmGQk.[D] N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3UCF8; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 3 3 0.5829 0 1 1 1 554.63373 1661.88663 1661.88675 -0.07 -0.00004 0/0 0 0 15599772 HCD 30 MS2 21.56782 566.4 110 44.8748 11523 11523 11516 QEplus033719.raw F4 554.9 617.3 672.1 458.4 534.2 561.8 361 4.34 4 FALSE 1.14E-05 4.03E-07 1.312 -250 43876 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRPPQGLVR [K].sRPPQGLVR.[V] N-Term(TMT6plex) 5 Q80UM7 Mannosyl-oligosaccharide glucosidase OS=Mus musculus OX=10090 GN=Mogs PE=1 SV=1 Q80UM7; Q3UME9; Q3U026; Q3U8P9; Q3U950 Mannosyl-oligosaccharide glucosidase OS=Mus musculus OX=10090 GN=Mogs PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mogs PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mogs PE=2 SV=1; Glyco_hydro_63 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Mogs PE=2 SV=1; Glyco_hydro_63 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Mogs PE=2 SV=1 0 3 3 0.4756 0 1 1 1 413.59012 1238.7558 1238.75307 2.21 0.00091 0/0 0 0 5759927.5 HCD 30 MS2 36.30653 347.8 110 44.8823 11526 11526 11516 QEplus033719.raw F4 401.8 222.1 346.9 383.9 324.2 407.7 179 3.07 1 FALSE 1.14E-05 0.0002493 0.781 -250 43884 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVVVAGR [K].nVVVAGR.[S] N-Term(TMT6plex) 3 P18155; D3YZG8 "Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial OS=Mus musculus OX=10090 GN=Mthfd2 PE=1 SV=1;Probable bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase 2 OS=Mus musculus OX=10090 GN=Mthfd2l PE=3 SV=1" P18155; Q3U8E7; D3YZG8 "Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial OS=Mus musculus OX=10090 GN=Mthfd2 PE=1 SV=1; Methenyltetrahydrofolate cyclohydrolase OS=Mus musculus OX=10090 GN=Mthfd2 PE=2 SV=1; Probable bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase 2 OS=Mus musculus OX=10090 GN=Mthfd2l PE=3 SV=1" 0 2 2 0.4353 0 1 1 1 472.29935 943.59142 943.58863 2.95 0.00139 0/0 0 0 50483704 HCD 30 MS2 45.73524 610.6 18.201 44.8918 11529 11529 11527 QEplus033719.raw F4 663.3 565.6 621.9 475.2 769.5 568.3 89 2.32 2 FALSE 0.000565 0.008626 0.428 -250 43894 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLSGPGQ [K].sLSGPGQ.[-] N-Term(TMT6plex) 4 Q9JM76 Actin-related protein 2/3 complex subunit 3 OS=Mus musculus OX=10090 GN=Arpc3 PE=1 SV=3 Q9JM76; H7BWZ3; D3Z2F8; D3Z2F7 Actin-related protein 2/3 complex subunit 3 OS=Mus musculus OX=10090 GN=Arpc3 PE=1 SV=3; Actin-related protein 2/3 complex subunit 3 OS=Mus musculus OX=10090 GN=Arpc3 PE=1 SV=1; Actin-related protein 2/3 complex subunit 3 OS=Mus musculus OX=10090 GN=Arpc3 PE=1 SV=1; Actin-related protein 2/3 complex subunit 3 OS=Mus musculus OX=10090 GN=Arpc3 PE=1 SV=1 0 2 2 0.8286 0 1 1 1 437.74585 874.48442 874.48316 1.44 0.00063 0/0 0 0 63815664 HCD 30 MS2 24.60919 343.8 19.645 44.8941 11530 11530 11527 QEplus033719.raw F4 393.9 224.4 297.6 377 365.4 404.6 15 2.8 1 FALSE 0.002148 0.04009 0.174 -250 43900 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THEAQIQEMR [K].tHEAQIQEMR.[Q] N-Term(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 3 3 0.7841 0 1 1 1 491.25555 1471.75211 1471.75248 -0.25 -0.00012 0/0 0 0 48601396 HCD 30 MS2 32.19313 364.3 26.601 44.8964 11531 11531 11527 QEplus033719.raw F4 381.9 345.4 375.6 281.3 427 374.4 160 4.91 1 FALSE 1.14E-05 8.28E-07 1.253 -250 43921 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQVTATK [K].nQVTATk.[A] N-Term(TMT6plex); K7(TMT6plex) 2 O08749 "Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Dld PE=1 SV=2" O08749; Q3TIE8 "Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Dld PE=1 SV=2; Dihydrolipoyl dehydrogenase OS=Mus musculus OX=10090 GN=Dld PE=2 SV=1" 0 2 2 0.4532 0 1 1 1 610.37433 1219.74138 1219.74106 0.26 0.00016 0/0 0 0 9391612 HCD 30 MS2 47.23672 842.3 110 44.9062 11535 11535 11527 QEplus033719.raw F4 1461 446.6 921.7 811.7 409.1 1003.4 596 2.67 1 FALSE 0.0001504 0.003293 0.548 -250 43928 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCTYTQVQTR [K].ncTYTQVQTR.[S] N-Term(TMT6plex); C2(Carbamidomethyl) 8 Q3UWX7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tcea1 PE=2 SV=1 Q3UV78; F6XMY4; P10711-2; Q9QVN7; E9PYD5; B7ZCS4; Q3UPE0; Q3UWX7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tcea2 PE=2 SV=1; Transcription elongation factor A protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Tcea2 PE=1 SV=1; Isoform 1 of Transcription elongation factor A protein 1 OS=Mus musculus OX=10090 GN=Tcea1; Transcription elongation factor A protein 2 OS=Mus musculus OX=10090 GN=Tcea2 PE=2 SV=2; Transcription elongation factor A protein 1 OS=Mus musculus OX=10090 GN=Tcea1 PE=1 SV=1; Transcription elongation factor A protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Tcea2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tcea1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tcea1 PE=2 SV=1 0 2 2 0.721 0 1 1 1 750.37823 1499.74919 1499.74739 1.2 0.0009 0/0 0 0 6573885.5 HCD 30 MS2 9.795841 291.8 110 44.9087 11536 11536 11527 QEplus033719.raw F4 288.5 308.5 321.1 213.8 370.9 248.1 145 3.62 1 FALSE 1.14E-05 9.20E-07 1.244 -250 43937 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGVYNPNK [K].hGVYNPNk.[I] N-Term(TMT6plex); K8(TMT6plex) 3 P08249 "Malate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Mdh2 PE=1 SV=3" A0A0G2JGY4; A0A0G2JF23; P08249 "Malate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Mdh2 PE=1 SV=1; Malate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Mdh2 PE=1 SV=1; Malate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Mdh2 PE=1 SV=3" 0 3 3 0.4342 0 1 1 1 462.93512 1386.79081 1386.7894 1.01 0.00047 0/0 0 0 34700204 HCD 30 MS2 10.46819 679.3 57.636 44.9185 11539 11539 11538 QEplus033719.raw F4 822.7 454.6 618.6 800.2 717.7 661.9 403 3.57 1 FALSE 1.14E-05 3.48E-05 0.945 -250 43953 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THYDPPRK [R].tHYDPPRk.[L] N-Term(TMT6plex); K8(TMT6plex) 4 Q8C2Q7; P70333 Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus OX=10090 GN=Hnrnph1 PE=1 SV=1;Heterogeneous nuclear ribonucleoprotein H2 OS=Mus musculus OX=10090 GN=Hnrnph2 PE=1 SV=1 Q8C2Q7; Q3TNG9; P70333; O35737 Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus OX=10090 GN=Hnrnph1 PE=1 SV=1; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnph1 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein H2 OS=Mus musculus OX=10090 GN=Hnrnph2 PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus OX=10090 GN=Hnrnph1 PE=1 SV=3 1 4 4 0.44 0 1 1 1 368.71643 1471.84389 1471.84217 1.17 0.00043 0/0 0 0 73556248 HCD 30 MS2 12.90566 326 12.874 44.923 11541 11541 11538 QEplus033719.raw F4 308.1 295 345.3 268.3 436.5 302.9 375 2.25 2 FALSE 0.0001707 0.003921 0.529 -250 43962 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQMMSEGK [K].hQMMSEGk.[I] N-Term(TMT6plex); K8(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.6623 0 1 1 1 469.25073 1405.73764 1405.73321 3.15 0.00148 0/0 0 0 14410622 HCD 30 MS2 48.16314 955.9 98.282 44.9253 11542 11542 11538 QEplus033719.raw F4 1053.6 555.2 870.9 1264.2 845.1 1146.2 293 3.02 2 FALSE 0.0006383 0.009852 0.407 -250 43968 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THEAQIQEMR [K].tHEAQIQEMR.[Q] N-Term(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 2 2 0.7725 0 1 1 1 736.38055 1471.75383 1471.75248 0.92 0.00068 0/0 0 0 13325102 HCD 30 MS2 0 392.6 110 44.9278 11543 11543 11538 QEplus033719.raw F4 404.9 407.6 441.3 279 468.5 354.1 166 4 1 FALSE 1.14E-05 3.98E-07 1.313 -250 43975 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTNYTMEHIR [K].hTNYTMEHIR.[V] N-Term(TMT6plex) 10 Q3ULT2; Q9JI91 Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1;Alpha-actinin-2 OS=Mus musculus OX=10090 GN=Actn2 PE=1 SV=2 A0A1L1SVJ6; Q9CTH3; Q5FW75; A0A1L1SV25; Q3UDJ7; Q3ULT2; Q9JI91; A0A1Y7VMW4; Q8BP35; Q8K3Q4 Alpha-actinin-4 (Fragment) OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actn2 PE=2 SV=1; Actinin alpha 2 OS=Mus musculus OX=10090 GN=Actn2 PE=2 SV=1; Alpha-actinin-4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Alpha-actinin-2 OS=Mus musculus OX=10090 GN=Actn2 PE=1 SV=2; Alpha-actinin-2 (Fragment) OS=Mus musculus OX=10090 GN=Actn2 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Actinin alpha 2 OS=Mus musculus OX=10090 GN=Actn2 PE=2 SV=1 0 3 3 0.7178 0 1 1 1 510.9281 1530.76975 1530.76846 0.84 0.00043 0/0 0 0 8358615.5 HCD 30 MS2 41.43963 706.1 110 44.9304 11544 11544 11538 QEplus033719.raw F4 856.8 530.2 803.1 652.4 628.2 765.7 165 4.82 2 FALSE 1.14E-05 1.78E-07 1.38 -250 43976 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTNYTMEHLR [K].hTNYTMEHLR.[V] N-Term(TMT6plex) 1 Q1A602 Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1 0 3 3 0.7178 0 1 2 2 510.9281 1530.76975 1530.76846 0.84 0.00043 0/0 0 0 8358615.5 HCD 30 MS2 41.43963 706.1 110 44.9304 11544 11544 11538 QEplus033719.raw F4 856.8 530.2 803.1 652.4 628.2 765.7 165 4.82 1 FALSE 1.14E-05 1.78E-07 1.38 -250 43980 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MIVTGHR [R].mIVTGHR.[R] N-Term(TMT6plex) 2 Q8CGK3 "Lon protease homolog, mitochondrial OS=Mus musculus OX=10090 GN=Lonp1 PE=1 SV=2" Q8CGK3; Q3V2D0 "Lon protease homolog, mitochondrial OS=Mus musculus OX=10090 GN=Lonp1 PE=1 SV=2; Lon protease homolog, mitochondrial OS=Mus musculus OX=10090 GN=Lonp1 PE=2 SV=1" 0 2 2 0.5377 0 1 1 1 521.80652 1042.60576 1042.6029 2.74 0.00143 0/0 0 0 5249095 HCD 30 MS2 40.09655 664.9 110 44.9329 11545 11545 11538 QEplus033719.raw F4 656.1 509.9 835.6 589.7 693.1 705.2 117 1.99 1 FALSE 0.0023 0.04564 0.155 -250 44006 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEGDAAALNR [K].aEGDAAALNR.[R] N-Term(TMT6plex) 1 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 0 2 2 0.459 0 1 1 1 608.82837 1216.64946 1216.64833 0.93 0.00057 0/0 0 0 23546756 HCD 30 MS2 60.95194 707 39.424 44.9522 11552 11552 11549 QEplus033719.raw F4 717.4 696.9 765.3 485.6 950.2 626.5 236 2.68 1 FALSE 1.14E-05 2.53E-07 1.351 -250 44022 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESDSVLR [K].eSDSVLR.[V] N-Term(TMT6plex) 1 P05201 "Aspartate aminotransferase, cytoplasmic OS=Mus musculus OX=10090 GN=Got1 PE=1 SV=3" P05201 "Aspartate aminotransferase, cytoplasmic OS=Mus musculus OX=10090 GN=Got1 PE=1 SV=3" 0 2 2 0.3898 0 1 1 1 517.78778 1034.56828 1034.56795 0.32 0.00017 0/0 0 0 11542572 HCD 30 MS2 15.27678 945.7 110 44.9572 11554 11554 11549 QEplus033719.raw F4 1197.5 656.9 888.1 928.6 950.3 1052.8 189 2.54 1 FALSE 0.0003012 0.006064 0.477 -250 44037 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEPGAPGENGTPGQAGAR [K].gEPGAPGENGTPGQAGAR.[G] N-Term(TMT6plex) 3 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 3 3 0.7421 0 1 1 1 617.97717 1851.91697 1851.91467 1.24 0.00077 0/0 0 0 6225687.5 HCD 30 MS2 18.04188 243.1 110 44.9622 11556 11556 11549 QEplus033719.raw F4 334.1 191.5 252.8 171.4 245.5 263 176 6.05 1 FALSE 1.14E-05 4.59E-11 2.061 -250 44059 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGIPPDQQR [K].eGIPPDQQR.[LV] N-Term(TMT6plex) 18 P62984; P62983 Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2;Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2 E9Q5F6; P62984; Q922Z8; Q922B0; Q3TH47; Q5SX22; E9Q4P0; P62983; Q78XY9; E9Q9J0; Q8R0Z9; B0LAC2; Q8C2K3; Q8VC46; A5JUZ1; A0A0A6YW67; E9QNP0; P0CG50 Polyubiquitin-C (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=1; Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Polyubiquitin-B (Fragment) OS=Mus musculus OX=10090 GN=Ubb PE=4 SV=2; KxDL motif-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2; Ubiquitin B OS=Mus musculus OX=10090 GN=Ubb PE=2 SV=1; 60S ribosomal protein L40 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=3 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiquitin A-52 residue ribosomal protein fusion product 1 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubb-ps PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiqutin subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Predicted pseudogene 8797 OS=Mus musculus OX=10090 GN=Gm8797 PE=4 SV=1; 60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Polyubiquitin-C OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=2 0 2 2 0.7 0 1 1 1 634.84418 1268.68108 1268.67963 1.14 0.00072 0/0 0 0 46524468 HCD 30 MS2 3.400921 516.1 43.373 44.9771 11561 11561 11560 QEplus033719.raw F4 508.7 430 560.9 399.6 598.6 598.5 285 2.9 2 FALSE 1.14E-05 0.0004376 0.734 -250 44062 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TMVDPNSR [R].tMVDPNSR.[N] N-Term(TMT6plex) 3 Q9EPC1 Alpha-parvin OS=Mus musculus OX=10090 GN=Parva PE=1 SV=1 Q9EPC1; Q8C5R4; Q3UF75 Alpha-parvin OS=Mus musculus OX=10090 GN=Parva PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Parva PE=2 SV=1; Alpha-parvin OS=Mus musculus OX=10090 GN=Parva PE=1 SV=1 0 2 2 0.4854 0 1 1 1 574.80072 1148.59416 1148.59312 0.91 0.00052 0/0 0 0 9196615 HCD 30 MS2 18.59531 713.1 110 44.9796 11562 11562 11560 QEplus033719.raw F4 910 577.7 711.7 526.5 723.8 828.9 227 2.39 1 FALSE 0.0006035 0.008876 0.423 -250 44076 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLDSEGR [R].vLDSEGR.[AL] N-Term(TMT6plex) 13 Q99K41 EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1 Q68G58-5; Q3UUU0; Q68G58-3; Q68G58-2; A2AFM5; Q68G58; A2AFM4; Q99K41; F7CPY7; Q3U254; Q3USG5; Q68G58-4; A2AFM3 Isoform 5 of DNA-(apurinic or apyrimidinic site) endonuclease 2 OS=Mus musculus OX=10090 GN=Apex2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; Isoform 3 of DNA-(apurinic or apyrimidinic site) endonuclease 2 OS=Mus musculus OX=10090 GN=Apex2; Isoform 2 of DNA-(apurinic or apyrimidinic site) endonuclease 2 OS=Mus musculus OX=10090 GN=Apex2; DNA-(apurinic or apyrimidinic site) endonuclease 2 OS=Mus musculus OX=10090 GN=Apex2 PE=1 SV=1; DNA-(apurinic or apyrimidinic site) endonuclease 2 OS=Mus musculus OX=10090 GN=Apex2 PE=1 SV=1; DNA-(apurinic or apyrimidinic site) endonuclease OS=Mus musculus OX=10090 GN=Apex2 PE=1 SV=1; EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1; DNA-(apurinic or apyrimidinic site) endonuclease 2 (Fragment) OS=Mus musculus OX=10090 GN=Apex2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; C1q domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; Isoform 4 of DNA-(apurinic or apyrimidinic site) endonuclease 2 OS=Mus musculus OX=10090 GN=Apex2; DNA-(apurinic or apyrimidinic site) endonuclease OS=Mus musculus OX=10090 GN=Apex2 PE=1 SV=1 0 2 2 0.3061 0 1 1 1 502.78275 1004.55821 1004.55739 0.82 0.00041 0/0 0 0 10271770 HCD 30 MS2 65.19824 867.6 75.254 44.9843 11564 11564 11560 QEplus033719.raw F4 872 757.6 893.5 820.6 912.9 948.8 218 1.96 1 FALSE 0.001343 0.01882 0.292 -250 44093 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGVYNPNK [K].hGVYNPNk.[I] N-Term(TMT6plex); K8(TMT6plex) 3 P08249 "Malate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Mdh2 PE=1 SV=3" A0A0G2JGY4; A0A0G2JF23; P08249 "Malate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Mdh2 PE=1 SV=1; Malate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Mdh2 PE=1 SV=1; Malate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Mdh2 PE=1 SV=3" 0 2 2 0.4024 0 1 1 1 693.89929 1386.79131 1386.7894 1.37 0.00095 0/0 0 0 9544325 HCD 30 MS2 0 547.1 110 44.9894 11566 11566 11560 QEplus033719.raw F4 626.4 360.3 486 722 547 540.8 402 3.38 1 FALSE 0.0001603 0.00373 0.535 -250 44113 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAGAVIHTHSK [R].gAGAVIHTHSk.[A] N-Term(TMT6plex); K11(TMT6plex) 1 Q9WVQ5 Methylthioribulose-1-phosphate dehydratase OS=Mus musculus OX=10090 GN=Apip PE=1 SV=1 Q9WVQ5 Methylthioribulose-1-phosphate dehydratase OS=Mus musculus OX=10090 GN=Apip PE=1 SV=1 0 4 4 1 0 1 1 1 384.73264 1535.90871 1535.90583 1.88 0.00072 0/0 0 0 4256385.5 HCD 30 MS2 57.19201 482.9 110 44.9968 11569 11569 11560 QEplus033719.raw F4 497.9 371.4 505.8 489.4 557.6 475.2 442 3.33 1 FALSE 1.14E-05 4.76E-07 1.299 -250 44114 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEPGAPGENGTPGQAGAR [K].gEPGAPGENGTPGQAGAR.[G] N-Term(TMT6plex) 3 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.776 0 1 1 1 926.46057 1851.91387 1851.91467 -0.43 -0.0004 0/0 0 0 2196775.75 HCD 30 MS2 0 77.7 110 44.9994 11570 11570 11560 QEplus033719.raw F4 66.5 93.2 78.6 36.3 111.7 79.7 162 5 1 FALSE 1.14E-05 1.32E-15 2.923 -250 44120 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSPEESQAR [K].lSPEESQAR.[L] N-Term(TMT6plex) 4 Q8BH97 Reticulocalbin-3 OS=Mus musculus OX=10090 GN=Rcn3 PE=1 SV=1 A0A1B0GRI0; A0A1B0GR19; A0A1B0GR86; Q8BH97 Reticulocalbin-3 (Fragment) OS=Mus musculus OX=10090 GN=Rcn3 PE=1 SV=1; Reticulocalbin-3 (Fragment) OS=Mus musculus OX=10090 GN=Rcn3 PE=1 SV=1; Reticulocalbin-3 (Fragment) OS=Mus musculus OX=10090 GN=Rcn3 PE=1 SV=1; Reticulocalbin-3 OS=Mus musculus OX=10090 GN=Rcn3 PE=1 SV=1 0 2 2 0.4587 0 1 1 1 623.33539 1245.6635 1245.66365 -0.12 -0.00007 0/0 0 0 12140981 HCD 30 MS2 13.31606 625.2 110 45.0067 11572 11572 11571 QEplus033719.raw F4 651.6 523.5 687.1 547.2 685.6 656.2 244 3.03 1 FALSE 1.14E-05 0.0003246 0.759 -250 44130 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDQIYR [R].eDQIYR.[I] N-Term(TMT6plex) 6 Q790Y8 Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pdx PE=1 SV=1 A3KG36; A0FF38; P97324; Q790Y8; Q3TNL1; G3UWD6 Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=G6pdx PE=1 SV=1; Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pd2 PE=3 SV=1; Glucose-6-phosphate 1-dehydrogenase 2 OS=Mus musculus OX=10090 GN=G6pd2 PE=1 SV=3; Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pdx PE=1 SV=1; Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pdx PE=2 SV=1; Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pd2 PE=1 SV=1 0 2 2 0.3143 0 1 1 1 526.78278 1052.55828 1052.55739 0.84 0.00044 0/0 0 0 27612030 HCD 30 MS2 23.90784 746.2 46.892 45.009 11573 11573 11571 QEplus033719.raw F4 762 817.3 828.3 477.9 938.8 653 173 2.45 1 FALSE 0.002208 0.04261 0.165 -250 44144 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTAAPTDPTDGP [R].hTAAPTDPTDGP.[-] N-Term(TMT6plex) 2 Q0VEW4 Proteolipid protein 2 OS=Mus musculus OX=10090 GN=Plp2 PE=1 SV=1 Q0VEW4; Q58E29 Proteolipid protein 2 OS=Mus musculus OX=10090 GN=Plp2 PE=1 SV=1; Proteolipid protein 2 OS=Mus musculus OX=10090 GN=Plp2 PE=2 SV=1 0 2 2 0.9186 0 1 1 1 704.84973 1408.69219 1408.69059 1.13 0.0008 0/0 0 0 48572092 HCD 30 MS2 12.51838 203.1 45.407 45.0135 11575 11575 11571 QEplus033719.raw F4 189.2 193.3 217.3 178.6 230.9 209 122 3.81 1 FALSE 1.14E-05 4.80E-08 1.488 -250 44151 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLTATGGNHVTAR [R].sLTATGGNHVTAR.[V] N-Term(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 3 3 0.7379 0 1 1 1 505.28134 1513.82947 1513.82842 0.69 0.00035 0/0 0 0 20885928 HCD 30 MS2 20.19612 419.2 43.586 45.018 11577 11577 11571 QEplus033719.raw F4 472.8 354.6 415.5 451.2 484.6 336.4 334 5.99 1 FALSE 1.14E-05 1.42E-11 2.158 -250 44171 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLNEQSPTR [R].kLNEQSPTR.[C] N-Term(TMT6plex); K1(TMT6plex) 4 O08547 Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=3 Q3UZ06; O08547; E9Q6R3; A0A0G2JF08 Uncharacterized protein OS=Mus musculus OX=10090 GN=Sec22b PE=2 SV=1; Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=3; Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=1; Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=1 1 3 3 0.3717 0 1 1 1 510.97372 1530.90662 1530.90041 4.06 0.00207 0/0 0 0 13407485 HCD 30 MS2 42.31138 788.7 85.315 45.0252 11580 11580 11571 QEplus033719.raw F4 821.5 683.5 858.1 736.8 812.9 819.5 447 3.04 1 FALSE 1.14E-05 0.000628 0.703 -250 44178 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESGEGQGGYAK [K].eSGEGQGGYAk.[E] N-Term(TMT6plex); K11(TMT6plex) 8 Q61941 "NAD(P) transhydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Nnt PE=1 SV=2" Q8BGK0; Q61941; Q3TGH1; Q8C9V5; Q922E1; E9Q8F4; Q8C1W8; Q8C3H2 "Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=1 SV=1; NAD(P) transhydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Nnt PE=1 SV=2; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=2 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=1 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=2 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=1 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=2 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=2 SV=1" 0 2 2 0.704 0 1 1 1 770.90479 1540.80229 1540.80076 1 0.00077 0/0 0 0 10029635 HCD 30 MS2 4.725377 512.2 110 45.0277 11581 11581 11571 QEplus033719.raw F4 490.2 429.6 595.4 537.1 519.3 501.8 233 4.02 1 FALSE 1.14E-05 8.54E-10 1.82 -250 44184 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSGSSIK [K].tSGSSIk.[I] N-Term(TMT6plex); K7(TMT6plex) 3 P56382 "ATP synthase subunit epsilon, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1e PE=1 SV=2" P56382; G8DXR6; Q6VEU5 "ATP synthase subunit epsilon, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1e PE=1 SV=2; Mitochondrial ATP synthase epsilon subunit (Fragment) OS=Mus musculus domesticus OX=10092 GN=Atp5e PE=3 SV=1; H+ transporting F1 ATP synthase epsilon subunit OS=Mus musculus OX=10090 GN=Atp5e PE=2 SV=1" 0 2 2 0.201 0 1 1 1 569.34827 1137.68926 1137.68796 1.14 0.00065 0/0 0 0 8130653.5 HCD 30 MS2 50.00394 1079.5 110 45.035 11583 11583 11582 QEplus033719.raw F4 2168 469.4 1012.1 864.7 492.4 1470.5 129 2.04 1 FALSE 0.0008899 0.01232 0.369 -250 44202 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRPAPEVK [K].gRPAPEVk.[W] N-Term(TMT6plex); K8(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.2869 0 1 1 1 437.94373 1311.81662 1311.81489 1.32 0.00058 0/0 0 0 40002344 HCD 30 MS2 56.61799 717.3 26.323 45.0398 11585 11585 11582 QEplus033719.raw F4 791 247.9 555 1196.5 404.5 1108.8 152 2.44 2 FALSE 0.00198 0.03458 0.196 -250 44209 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSGTPGNRPGSVIR [K].tSGTPGNRPGSVIR.[V] N-Term(TMT6plex) 13 B8X349 JNK-interacting leucine zipper protein long form OS=Mus musculus OX=10090 GN=Spag9 PE=2 SV=1 B8X349; E9PUD1; Q58A65-3; Q8C7W0; Q6PA03; A0A0R4J196; Q58A65; Q58A65-6; Q58A65-2; Q58A65-5; Q58A65-4; F8WH31; Z4YMB8 JNK-interacting leucine zipper protein long form OS=Mus musculus OX=10090 GN=Spag9 PE=2 SV=1; C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=1; Isoform 3 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; RH2 domain-containing protein OS=Mus musculus OX=10090 GN=Spag9 PE=2 SV=1; Spag9 protein (Fragment) OS=Mus musculus OX=10090 GN=Spag9 PE=2 SV=1; C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=1; C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=2; Isoform 6 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; Isoform 2 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; Isoform 5 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; Isoform 4 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=2; C-Jun-amino-terminal kinase-interacting protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=1 0 3 3 0.5172 0 1 1 1 543.3078 1627.90885 1627.90773 0.68 0.00037 0/0 0 0 19169184 HCD 30 MS2 6.641055 508.3 90.111 45.0421 11586 11586 11582 QEplus033719.raw F4 510.2 466.6 610.9 385.7 544.5 531.8 412 4.08 1 FALSE 1.14E-05 9.19E-08 1.434 -250 44212 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEVASDAK [R].gEVASDAk.[RS] N-Term(TMT6plex); K8(TMT6plex) 2 P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 A0A2R8VHJ0; P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=1; Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 0 2 2 0.4212 0 1 1 1 617.85602 1234.70476 1234.70434 0.34 0.00021 0/0 0 0 13024124 HCD 30 MS2 51.69437 990.4 110 45.0446 11587 11587 11582 QEplus033719.raw F4 2076 639.2 964.2 695.3 593.9 973.8 468 2.73 1 FALSE 1.14E-05 0.0001162 0.845 -250 44220 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYQEAK [K].nYQEAk.[D] N-Term(TMT6plex); K6(TMT6plex) 1 P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor 0 2 2 0.4722 0 1 1 1 605.84607 1210.68486 1210.68321 1.37 0.00083 0/0 0 0 12586042 HCD 30 MS2 8.346637 914.7 110 45.0471 11588 11588 11582 QEplus033719.raw F4 1772.6 263.9 500.6 185.9 2518.9 246.1 291 2.52 1 TRUE 0.002578 0.05061 0.14 -250 44232 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEVAGTPHSGAEK [R].qEVAGTPHSGAEk.[D] N-Term(TMT6plex); K13(TMT6plex) 1 P35831 Tyrosine-protein phosphatase non-receptor type 12 OS=Mus musculus OX=10090 GN=Ptpn12 PE=1 SV=3 P35831 Tyrosine-protein phosphatase non-receptor type 12 OS=Mus musculus OX=10090 GN=Ptpn12 PE=1 SV=3 0 3 3 0.7081 0 1 1 1 590.3252 1768.96103 1768.95938 0.93 0.00055 0/0 0 0 7645970 HCD 30 MS2 9.032667 350.7 110 45.0543 11591 11591 11582 QEplus033719.raw F4 388.3 294.8 370.2 300.6 382.8 367.3 367 5.79 1 FALSE 1.14E-05 1.27E-14 2.737 -250 44254 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FTTSDSCDR [K].fTTSDScDR.[I] N-Term(TMT6plex); C7(Carbamidomethyl) 4 A0A1W2P757 TLE family member 5 (Fragment) OS=Mus musculus OX=10090 GN=Tle5 PE=1 SV=1 P63002-2; A0A1W2P757; B7ZNK7; P63002 Isoform 2 of TLE family member 5 OS=Mus musculus OX=10090 GN=Tle5; TLE family member 5 (Fragment) OS=Mus musculus OX=10090 GN=Tle5 PE=1 SV=1; Aes protein OS=Mus musculus OX=10090 GN=Tle5 PE=2 SV=1; TLE family member 5 OS=Mus musculus OX=10090 GN=Tle5 PE=1 SV=1 0 2 2 0.6254 0 1 1 1 659.30151 1317.59575 1317.59425 1.14 0.00075 0/0 0 0 6477114 HCD 30 MS2 23.40876 354.1 110 45.0667 11595 11595 11593 QEplus033719.raw F4 341.4 366.9 389.4 254.9 465.7 306.2 19 3.31 1 FALSE 1.14E-05 6.82E-06 1.079 -250 44262 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHLNAQAACTPR [R].aHLNAQAAcTPR.[R] N-Term(TMT6plex); C9(Carbamidomethyl) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 3 3 0.8063 0 1 1 1 513.6073 1538.80735 1538.80591 0.93 0.00048 0/0 0 0 55230616 HCD 30 MS2 18.17018 275.1 25.266 45.0712 11597 11597 11593 QEplus033719.raw F4 366.6 194.7 287.8 236.1 299.5 266 279 4.75 1 FALSE 1.14E-05 3.07E-09 1.715 -250 44288 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPVSGGNVQATSR [R].ePVSGGNVQATSR.[K] N-Term(TMT6plex) 3 A0A571BDS0 Xin actin-binding repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Xirp1 PE=1 SV=2 A0A571BDS0; O70373; E9QQ93 Xin actin-binding repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Xirp1 PE=1 SV=2; Xin actin-binding repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Xirp1 PE=1 SV=2; Xin actin-binding repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Xirp1 PE=1 SV=2 0 2 2 0.7427 0 1 1 1 765.90942 1530.81157 1530.80735 2.76 0.00211 0/0 0 0 7523106.5 HCD 30 MS2 14.90928 210.1 110 45.0805 11601 11601 11593 QEplus033719.raw F4 228.3 85.2 239.2 277.6 101.6 328.6 259 3.77 1 FALSE 1.14E-05 1.57E-08 1.58 -250 44292 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSREEDTSLK [R].qSREEDTSLk.[L] N-Term(TMT6plex); K10(TMT6plex) 7 Q3TN39 Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1 Q3TN39; Q60849; P10852; Q3TIP1; P10852-2; A0A0U1RPK4; Q8BTJ9 Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; CD98 heavy chain OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; Isoform 2 of 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2; 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1 1 3 3 0.5069 0 1 1 1 550.97321 1650.90506 1650.90628 -0.74 -0.00041 0/0 0 0 6441377.5 HCD 30 MS2 26.00184 938.8 110 45.083 11602 11602 11593 QEplus033719.raw F4 1211.8 688.8 985.8 707.5 1102.4 936.5 404 2.9 1 FALSE 1.14E-05 1.38E-05 1.021 -250 44313 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDIVDR [K].dDIVDR.[A] N-Term(TMT6plex) 1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 0 2 2 0.123 0 1 1 1 481.26205 961.51683 961.51519 1.71 0.00082 0/0 0 0 63033808 HCD 30 MS2 14.58143 751.6 21.571 45.0974 11607 11607 11604 QEplus033719.raw F4 808.5 613 770.1 663.8 861.9 792.1 215 2.52 1 FALSE 0.002998 0.0585 0.118 -250 44332 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAMTSSMER [R].gAMTSSMER.[D] N-Term(TMT6plex) 7 A2ATP6 Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=2 A2ATP6; Q8C854-1; A7UQY4; Q8C854-3; A2ATP5; G8JL68; Q8C854 Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=2; Isoform 3 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Isoform 2 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2; Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1 0 2 2 0.6617 0 1 1 1 599.79236 1198.57744 1198.57576 1.4 0.00084 0/0 0 0 33031402 HCD 30 MS2 4.862264 675.9 39.892 45.1041 11610 11610 11604 QEplus033719.raw F4 685 639.6 797.3 471.5 803.6 658.5 56 3.34 1 FALSE 1.14E-05 0.0003241 0.759 -250 44344 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALGHQLGR [K].aLGHQLGR.[F] N-Term(TMT6plex) 2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4; O08821 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2; Cytoplasmic dynein heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1 0 3 3 0.6036 0 1 1 1 360.88748 1080.64789 1080.64754 0.32 0.00012 0/0 0 0 16332591 HCD 30 MS2 28.9801 735.1 88.814 45.1086 11612 11612 11604 QEplus033719.raw F4 826.1 498.7 849.5 624.5 846.5 765.4 147 3.91 1 FALSE 1.14E-05 0.0004224 0.737 -250 44354 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPSAAPVK [K].rPSAAPVk.[Q] N-Term(TMT6plex); K8(TMT6plex) 10 A2AGT5 Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5 PE=1 SV=1 Q6PB55; A2AGT5; Z4YL78; A2AGT5-3; Q8K250; A2AGT5-2; A0A0R4J0K2; Q80U79; K3W4R5; Q4V782 Ckap5 protein (Fragment) OS=Mus musculus OX=10090 GN=Ckap5 PE=2 SV=1; Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5 PE=1 SV=1; Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5 PE=1 SV=1; Isoform 3 of Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5; Ckap5 protein (Fragment) OS=Mus musculus OX=10090 GN=Ckap5 PE=2 SV=1; Isoform 2 of Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5; Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5 PE=1 SV=1; MKIAA0097 protein (Fragment) OS=Mus musculus OX=10090 GN=Ckap5 PE=2 SV=1; Cytoskeleton-associated protein 5 OS=Mus musculus OX=10090 GN=Ckap5 PE=1 SV=1; Ckap5 protein OS=Mus musculus OX=10090 GN=Ckap5 PE=2 SV=1 0 3 3 0.5904 0 1 1 1 428.61212 1283.82181 1283.81998 1.43 0.00061 0/0 0 0 15173480 HCD 30 MS2 22.87877 742.1 90.672 45.1109 11613 11613 11604 QEplus033719.raw F4 775.2 542.7 725.5 611.8 1050.3 746.9 102 3.54 1 FALSE 1.14E-05 8.92E-05 0.867 -250 44367 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSGVITCR [R].dSGVITcR.[A] N-Term(TMT6plex); C7(Carbamidomethyl) 8 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; Q9CV48; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Ig-like domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.5983 0 1 1 1 568.80103 1136.59477 1136.59312 1.45 0.00083 0/0 0 0 24250438 HCD 30 MS2 22.31282 1139.2 110 45.1229 11617 11617 11615 QEplus033719.raw F4 1683.5 364.7 1095.8 1623.2 377.6 1690.2 187 2.39 2 FALSE 5.44E-05 0.002264 0.586 -250 44384 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGIHEDSQNR [K].lGIHEDSQNR.[K] N-Term(TMT6plex) 8 P07901 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4 Q3TKB9; P07901; Q3TJU7; Q3TKA2; Q3UIF3; A0PJ91; Q3TKG0; Q8C5U3 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 0 3 3 0.6241 0 1 1 1 466.58307 1397.73465 1397.73346 0.86 0.0004 0/0 0 0 31089730 HCD 30 MS2 56.27016 557.7 48.575 45.1297 11620 11620 11615 QEplus033719.raw F4 646.8 463.3 555.2 430.6 695.1 555.5 217 4.07 1 FALSE 1.14E-05 4.37E-07 1.306 -250 44407 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDEHGFISR [R].qDEHGFISR.[E] N-Term(TMT6plex) 2 Q52L78 Alpha(B)-crystallin OS=Mus musculus OX=10090 GN=Cryab PE=1 SV=1 A0A1L1SRG5; Q52L78 Alpha-crystallin B chain (Fragment) OS=Mus musculus OX=10090 GN=Cryab PE=1 SV=1; Alpha(B)-crystallin OS=Mus musculus OX=10090 GN=Cryab PE=1 SV=1 0 3 3 0.6099 0 1 1 1 439.89713 1317.67682 1317.67488 1.47 0.00065 0/0 0 0 15170412 HCD 30 MS2 40.19508 962.7 68.56 45.1367 11623 11623 11615 QEplus033719.raw F4 1083.8 598 923.9 1062.4 888.8 1219.1 187 3.64 1 FALSE 1.14E-05 0.0001172 0.844 -250 44412 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALGHQLGR [K].aLGHQLGR.[F] N-Term(TMT6plex) 2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4; O08821 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2; Cytoplasmic dynein heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1 0 2 2 0.6076 0 1 1 1 540.82867 1080.65007 1080.64754 2.34 0.00126 0/0 0 0 7094297.5 HCD 30 MS2 17.82639 780.3 110 45.1392 11624 11624 11615 QEplus033719.raw F4 819.2 591.4 883 691.2 780.3 916.5 159 2.37 1 FALSE 1.14E-05 0.0003393 0.755 -250 44422 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAAEVMGR [R].qAAEVMGR.[L] N-Term(TMT6plex) 5 E9PVA8 eIF-2-alpha kinase activator GCN1 OS=Mus musculus OX=10090 GN=Gcn1 PE=1 SV=1 Q640Q4; E9PVA8; Q3UHQ5; Q8CHH7; Q8BTM7 Gcn1l1 protein (Fragment) OS=Mus musculus OX=10090 GN=Gcn1 PE=2 SV=1; eIF-2-alpha kinase activator GCN1 OS=Mus musculus OX=10090 GN=Gcn1 PE=1 SV=1; TOG domain-containing protein OS=Mus musculus OX=10090 GN=Gcn1 PE=2 SV=1; MKIAA0219 protein (Fragment) OS=Mus musculus OX=10090 GN=Gcn1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Gcn1 PE=2 SV=1 0 2 2 0.529 0 1 1 1 545.79926 1090.59123 1090.58764 3.29 0.00179 0/0 0 0 6845156 HCD 30 MS2 47.19247 849.8 110 45.1417 11625 11625 11615 QEplus033719.raw F4 1015.3 664.3 894.9 703.4 929.8 891 270 2.59 1 FALSE 4.43E-05 0.001429 0.63 -250 44430 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEFAER [R].aEFAER.[ST] N-Term(TMT6plex) 35 E9Q456; G5E8R2; G5E8R1; P58774; Q8C7C3; A2AIM4; Q58E70; P58774-2; E9Q5J9; A0A0R4J1P2; E9Q450; Q6IRU2 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 E9Q456; Q9D1R6; E9Q455; G5E8R2; E9Q453; G5E8R1; Q8BSH3; A0A571BEU1; D3Z6I8; E9Q452; P58774; F8WID5; Q8C7C3; A2AIM4; Q3TJ53; Q58E70; D3Z2H9; Q3SX28; P58774-2; E9Q454; Q61344; E9Q5J9; A0A0R4J1P2; E9Q448; P21107; E9Q450; Q8K0Z5; G5E8R0; Q564G1; B7ZNL3; Q8BP43; Q6IRU2; E9Q7Q3; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin 3, related sequence 7 OS=Mus musculus OX=10090 GN=Tpm3-rs7 PE=3 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=3; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 3, gamma OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 0 2 2 0.4231 0 1 1 1 476.25916 951.51103 951.50971 1.39 0.00066 0/0 0 0 110397424 HCD 30 MS2 5.816565 566.8 11.34 45.149 11627 11627 11626 QEplus033719.raw F4 554.3 379.2 599.1 559.2 583.4 725.4 133 2.34 12 TRUE 0.004791 0.08378 0.051 -250 44459 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRFEDVSER [R].gRFEDVSER.[G] N-Term(TMT6plex) 5 P51855 Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1 P51855; Q3UEE2; Q8R436; Q3TWM2; H3BKH4 Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1; Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1; Glutathione synthase (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=2 SV=1; Glutathione synthase (Fragment) OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1 1 3 3 0.4384 0 1 1 1 441.90067 1323.68744 1323.68544 1.51 0.00067 0/0 0 0 17311934 HCD 30 MS2 24.21656 472.9 59.07 45.1583 11631 11631 11626 QEplus033719.raw F4 503.1 360.1 490.7 434.7 513.5 535.3 252 3.49 1 FALSE 1.14E-05 0.0005527 0.714 -250 44467 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEPGQVK [K].sEPGQVk.[A] N-Term(TMT6plex); K7(TMT6plex) 5 Q540D7 Alcohol dehydrogenase [NADP(+)] OS=Mus musculus OX=10090 GN=Akr1a1 PE=1 SV=1 Q80XJ7; Q540D7; Q3UJW9; B1AXW3; Q810X5 Alcohol dehydrogenase [NADP(+)] OS=Mus musculus OX=10090 GN=Akr1a1 PE=2 SV=1; Alcohol dehydrogenase [NADP(+)] OS=Mus musculus OX=10090 GN=Akr1a1 PE=1 SV=1; Alcohol dehydrogenase [NADP(+)] OS=Mus musculus OX=10090 GN=Akr1a1 PE=2 SV=1; Aldo-keto reductase family 1 member A1 (Fragment) OS=Mus musculus OX=10090 GN=Akr1a1 PE=1 SV=8; Aldehyde reductase (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1 0 2 2 0.5236 0 1 1 1 601.86212 1202.71697 1202.71451 2.04 0.00123 0/0 0 0 15169343 HCD 30 MS2 61.30649 774.1 49.201 45.1605 11632 11632 11626 QEplus033719.raw F4 868.8 670 852.3 675.1 825.4 752.8 389 2.12 1 FALSE 0.006282 0.102 0.001 -250 44472 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREEQAEPDGTEEADK [K].qREEQAEPDGTEEADk.[S] N-Term(TMT6plex); K16(TMT6plex) 2 B2RY26 Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1 B2RY26; B2RXX9 "Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1" 1 3 3 0.8313 0 1 1 1 764.04565 2290.12241 2290.11992 1.09 0.00083 0/0 0 0 9776198 HCD 30 MS2 0 220.7 110 45.1631 11633 11633 11626 QEplus033719.raw F4 314.3 23.9 86.6 568.9 53.2 277.2 171 5.81 1 FALSE 1.14E-05 6.31E-16 4.086 -250 44479 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QALHSGQNHLK [R].qALHSGQNHLk.[E] N-Term(TMT6plex); K11(TMT6plex) 8 Q3TWN8 Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1 Q3TWN8; Q3UZ27; Q9Z110; H3BKJ8; H3BLE8; Q9Z110-2; D3Z0B4; Q3UGW8 Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1; Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=1 SV=2; Delta-1-pyrroline-5-carboxylate synthase (Fragment) OS=Mus musculus OX=10090 GN=Aldh18a1 PE=1 SV=1; Delta-1-pyrroline-5-carboxylate synthase (Fragment) OS=Mus musculus OX=10090 GN=Aldh18a1 PE=1 SV=1; Isoform Short of Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1; Delta-1-pyrroline-5-carboxylate synthase (Fragment) OS=Mus musculus OX=10090 GN=Aldh18a1 PE=1 SV=2; Gamma-glutamyl kinase (Fragment) OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1 0 3 3 0.7108 0 1 1 1 564.33124 1690.97916 1690.97531 2.28 0.00128 0/0 0 0 8417040 HCD 30 MS2 49.88673 741.4 110 45.1656 11634 11634 11626 QEplus033719.raw F4 831.3 667 822.6 617.2 837.3 673.1 469 4.91 1 FALSE 1.14E-05 7.77E-14 2.587 -250 44484 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGIHEDSQNR [K].lGIHEDSQNR.[K] N-Term(TMT6plex) 8 P07901 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4 Q3TKB9; P07901; Q3TJU7; Q3TKA2; Q3UIF3; A0PJ91; Q3TKG0; Q8C5U3 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 0 2 2 0.6667 0 1 1 1 699.37183 1397.73638 1397.73346 2.09 0.00146 0/0 0 0 7545869 HCD 30 MS2 0 386 110 45.1681 11635 11635 11626 QEplus033719.raw F4 407.5 421.6 400 274.4 545.7 266.7 229 3.45 1 FALSE 1.14E-05 1.01E-07 1.427 -250 44493 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQGGFGDRNEYGSR [R].dQGGFGDRNEYGSR.[V] N-Term(TMT6plex) 2 Q3U0V1 Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2 Q3U0V1; A0A3B2WCD8 Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2; Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=1 1 3 3 0.6882 0 1 1 1 596.28326 1786.83524 1786.8306 2.59 0.00154 0/0 0 0 5069217 HCD 30 MS2 35.71772 547.5 110 45.1706 11636 11636 11626 QEplus033719.raw F4 515.7 570.3 612 406.6 664.8 515.6 63 4.49 1 FALSE 1.14E-05 9.48E-06 1.052 -250 44497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPPAENSDSPVR [K].sPPAENSDSPVR.[S] N-Term(TMT6plex) 6 E9Q3Z5 Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1 E9Q3Z5; E3VVQ8; Q8K4L2; Q8K4L3; Q8K4L3-3; A0A1B0GS91 Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin muscle-specific isoform OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1; Archvillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Isoform 2 of Supervillin OS=Mus musculus OX=10090 GN=Svil; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1 0 2 2 0.7053 0 1 1 1 742.88141 1484.75554 1484.75425 0.87 0.00064 0/0 0 0 4695870.5 HCD 30 MS2 26.57052 155.7 110 45.1779 11638 11638 11637 QEplus033719.raw F4 154 111.7 183.5 151.7 161.5 171.9 171 3.19 1 FALSE 1.14E-05 1.72E-08 1.573 -250 44504 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSEPAEAGGIQR [K].dSEPAEAGGIQR.[G] N-Term(TMT6plex) 2 Q91VH2 Sorting nexin-9 OS=Mus musculus OX=10090 GN=Snx9 PE=1 SV=1 Q91VH2; Q3TZU7 Sorting nexin-9 OS=Mus musculus OX=10090 GN=Snx9 PE=1 SV=1; Sorting nexin OS=Mus musculus OX=10090 GN=Snx9 PE=2 SV=1 0 2 2 0.7226 0 1 1 1 729.87354 1458.73979 1458.7386 0.82 0.0006 0/0 0 0 6793851.5 HCD 30 MS2 10.73463 265.6 110 45.1804 11639 11639 11637 QEplus033719.raw F4 279.4 243.9 273.5 196.9 314.2 285.6 166 4.29 1 FALSE 1.14E-05 7.30E-11 2.023 -250 44520 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EKEELDR [K].ekEELDR.[G] N-Term(TMT6plex); K2(TMT6plex) 2 Q61081 Hsp90 co-chaperone Cdc37 OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1 Q61081; A0A1L1STC0 Hsp90 co-chaperone Cdc37 OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1; Hsp90 co-chaperone Cdc37 (Fragment) OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1 1 2 2 0.0928 0 1 1 1 688.89484 1376.7824 1376.77857 2.78 0.00192 0/0 0 0 6139367 HCD 30 MS2 45.12391 387.4 110 45.1877 11642 11642 11637 QEplus033719.raw F4 402.6 333.9 396.2 323.7 487.7 380.1 441 2.37 1 FALSE 0.001736 0.02947 0.219 -250 44528 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FTEAGER [R].fTEAGER.[V] N-Term(TMT6plex) 1 Q9CQ06 "39S ribosomal protein L24, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl24 PE=1 SV=1" Q9CQ06 "39S ribosomal protein L24, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl24 PE=1 SV=1" 0 2 2 0.2949 0 1 1 1 519.77466 1038.54204 1038.54174 0.29 0.00015 0/0 0 0 13290978 HCD 30 MS2 36.27877 1201.7 110 45.1902 11643 11643 11637 QEplus033719.raw F4 1231.3 990.1 1325.7 1093.5 1207.3 1362.3 104 2.34 1 FALSE 0.001591 0.02498 0.244 -250 44535 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYGAGVCSTR [K].eYGAGVcSTR.[Q] N-Term(TMT6plex); C7(Carbamidomethyl) 1 P97363 Serine palmitoyltransferase 2 OS=Mus musculus OX=10090 GN=Sptlc2 PE=1 SV=2 P97363 Serine palmitoyltransferase 2 OS=Mus musculus OX=10090 GN=Sptlc2 PE=1 SV=2 0 2 2 0.4576 0 1 1 1 664.82831 1328.64934 1328.64662 2.05 0.00136 0/0 0 0 3843623.5 HCD 30 MS2 25.37213 351 110 45.1927 11644 11644 11637 QEplus033719.raw F4 366.9 325.5 364.2 285.3 449.8 314.3 73 2.95 1 FALSE 7.59E-05 0.00279 0.566 -250 44541 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLGGGLGGTR [R].rLGGGLGGTR.[R] N-Term(TMT6plex) 4 A2RS68 U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 A0A1B0GR50; A2RS68; Q9CR32; A0A1B0GSX5 U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=3; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1 1 2 2 0.1908 0 1 1 1 586.85602 1172.70476 1172.70612 -1.16 -0.00068 0/0 0 0 2613196 HCD 30 MS2 72.77256 503.4 110 45.1952 11645 11645 11637 QEplus033719.raw F4 541.8 373.9 558.1 456.8 528.8 560.8 405 1.73 1 FALSE 0.0005556 0.008481 0.43 -250 44551 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AWTAGSNNTR [-].aWTAGSNNTR.[F] N-Term(TMT6plex) 1 Q3UFA8 Voltage-dependent anion-selective channel protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Vdac3 PE=2 SV=1 Q3UFA8 Voltage-dependent anion-selective channel protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Vdac3 PE=2 SV=1 0 2 2 0.1667 0 1 1 1 653.83966 1306.67204 1306.67013 1.47 0.00096 0/0 0 0 1728181 HCD 30 MS2 58.70971 215.3 110 45.1977 11646 11646 11637 QEplus033719.raw F4 208.1 181.1 231.1 190.8 248.4 232.4 205 1.92 1 FALSE 0.002071 0.03841 0.18 -250 44561 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEVASDAK [R].gEVASDAk.[RS] N-Term(TMT6plex); K8(TMT6plex) 2 P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 A0A2R8VHJ0; P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=1; Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 0 2 2 0.4248 0 1 1 1 617.85657 1234.70586 1234.70434 1.23 0.00076 0/0 0 0 57386528 HCD 30 MS2 15.00853 1135.2 24.929 45.2 11647 11647 11637 QEplus033719.raw F4 1919.3 731.3 1154.7 940.8 884.8 1180.6 431 2.26 1 FALSE 3.35E-05 0.001363 0.634 -250 44584 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLQAEEK [K].rLQAEEk.[A] N-Term(TMT6plex); K7(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.1197 0 1 1 1 444.6069 1331.80616 1331.80472 1.08 0.00048 0/0 0 0 71590888 HCD 30 MS2 10.33061 582.4 16.348 45.2118 11651 11651 11648 QEplus033719.raw F4 921 352.8 586.5 640.8 461.5 531.7 582 2.84 2 FALSE 1.14E-05 0.000389 0.744 -250 44590 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLGGGLGGTR [R].rLGGGLGGTR.[R] N-Term(TMT6plex) 4 A2RS68 U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 A0A1B0GR50; A2RS68; Q9CR32; A0A1B0GSX5 U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=3; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1 1 3 3 0.3634 0 1 1 1 391.57416 1172.70792 1172.70612 1.53 0.0006 0/0 0 0 55598024 HCD 30 MS2 45.529 465.7 14.546 45.2141 11652 11652 11648 QEplus033719.raw F4 488 357.6 506.5 424.5 511.9 505.6 301 4.21 1 FALSE 1.14E-05 3.57E-06 1.132 -250 44611 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDNSSRFGK [RK].nDNSSRFGk.[YFL] N-Term(TMT6plex); K9(TMT6plex) 78 P46735; Q69ZX3; Q5SX40; Q99104; P13541; Q5SX39; Q5SYD0; Q9WTI7-3; Q5SV64; Q8VDD5; B2RY26; P13542 Unconventional myosin-Ib OS=Mus musculus OX=10090 GN=Myo1b PE=1 SV=3;MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Unconventional myosin-Va OS=Mus musculus OX=10090 GN=Myo5a PE=1 SV=2;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Unconventional myosin-Id OS=Mus musculus OX=10090 GN=Myo1d PE=1 SV=1;Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c;Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 P46735; Q2TAW4; G5E8G6; P97479; Q6URW6-2; B2RWW8; Q69ZX3; B2RWZ2; G3X9Y9; Q80T68; A0A2R8VHF9; Q3TTZ3; Q5SYD0-2; E9QNH6; Q99MZ6; P46735-2; Q9QZZ4; Q5SX40; Q99104; P13541; Q8BLI3; Q8BWI3; F6VXK7; Q5SX39; Q8VHZ3; A0A338P6K2; E9Q1F5; A0A1L1SUF0; A0A0U1RPX7; G3UW82; Q3UUB1; Q9D6A1; B2RWX0; B2RQQ1; O08638-2; A0A0R4J113; E9PWM9; Q5SYD0; Q9QZZ4-3; D3YV80; Q9WTI7; O08638; E9Q580; Q9WTI7-3; E9Q264; Q5SV64; Q3UH59; P97479-2; Q8BLW0; Q8VDD5; Q7TQD7; Q8BIE2; I6L963; B1AR69; B2RY26; Q5BKR0; A0A0J9YUC4; P21271; Q6P8P3; P21271-3; Q6URW6; E9QPE7; Q8BLI1; D3YZ62; K3W4R2; Q6URW6-3; A2AQP0; Q8BWY8; B2RXX9; Q3UEQ4; Q5MJ56; D3Z4J3; Q3UQQ3; Q9QZZ4-2; P13542; Q9WTI7-2; Q9WTI7-4; Q61879 "Unconventional myosin-Ib OS=Mus musculus OX=10090 GN=Myo1b PE=1 SV=3; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Unconventional myosin-Vb OS=Mus musculus OX=10090 GN=Myo5b PE=1 SV=1; Unconventional myosin-VIIa OS=Mus musculus OX=10090 GN=Myo7a PE=1 SV=2; Isoform 2 of Myosin-14 OS=Mus musculus OX=10090 GN=Myh14; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myo1d protein OS=Mus musculus OX=10090 GN=Myo1d PE=2 SV=1; Unconventional myosin-Vb OS=Mus musculus OX=10090 GN=Myo5b PE=1 SV=1; MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin motor domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myo1b PE=2 SV=1; Isoform 2 of Unconventional myosin-Id OS=Mus musculus OX=10090 GN=Myo1d; Unconventional myosin-Ib OS=Mus musculus OX=10090 GN=Myo1b PE=1 SV=1; Unconventional myosin-VIIb OS=Mus musculus OX=10090 GN=Myo7b PE=1 SV=3; Isoform 2 of Unconventional myosin-Ib OS=Mus musculus OX=10090 GN=Myo1b; Unconventional myosin-XV OS=Mus musculus OX=10090 GN=Myo15a PE=1 SV=2; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Unconventional myosin-Va OS=Mus musculus OX=10090 GN=Myo5a PE=1 SV=2; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin XV (Fragment) OS=Mus musculus OX=10090 GN=Myo15 PE=3 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Extraocular myosin heavy chain EO-MYHC (Fragment) OS=Mus musculus OX=10090 GN=Myh13 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin VC OS=Mus musculus OX=10090 GN=Myo5c PE=1 SV=1; Myosin VC OS=Mus musculus OX=10090 GN=Myo5c PE=1 SV=1; Unconventional myosin-VIIa OS=Mus musculus OX=10090 GN=Myo7a PE=1 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Unconventional myosin-Ih OS=Mus musculus OX=10090 GN=Myo1h PE=2 SV=2; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Unconventional myosin-VIIa OS=Mus musculus OX=10090 GN=Myo7a PE=1 SV=1; Unconventional myosin-Ih OS=Mus musculus OX=10090 GN=Myo1h PE=1 SV=2; Unconventional myosin-Id OS=Mus musculus OX=10090 GN=Myo1d PE=1 SV=1; Isoform 3 of Unconventional myosin-XV OS=Mus musculus OX=10090 GN=Myo15a; Unconventional myosin-Ib (Fragment) OS=Mus musculus OX=10090 GN=Myo1b PE=1 SV=1; Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c PE=1 SV=2; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Unconventional myosin-Ib OS=Mus musculus OX=10090 GN=Myo1b PE=1 SV=1; Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Myosin, heavy chain 15 OS=Mus musculus OX=10090 GN=Myh15 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Isoform 2 of Unconventional myosin-VIIa OS=Mus musculus OX=10090 GN=Myo7a; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myo1b protein OS=Mus musculus OX=10090 GN=Myo1b PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myh6 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Unconventional myosin-Ih OS=Mus musculus OX=10090 GN=Myo1h PE=1 SV=1; Unconventional myosin-Vb OS=Mus musculus OX=10090 GN=Myo5b PE=1 SV=2; Myh6 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Isoform 3 of Unconventional myosin-Vb OS=Mus musculus OX=10090 GN=Myo5b; Myosin-14 OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Unconventional myosin-Va OS=Mus musculus OX=10090 GN=Myo5a PE=1 SV=1; Myosin-14 OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Isoform 3 of Myosin-14 OS=Mus musculus OX=10090 GN=Myh14; Myosin-7B OS=Mus musculus OX=10090 GN=Myh7b PE=3 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myo5c PE=2 SV=2; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin motor domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myo1b PE=2 SV=1; Myosin VIIa isoform 2 OS=Mus musculus OX=10090 GN=Myo7a PE=1 SV=1; Unconventional myosin-Va OS=Mus musculus OX=10090 GN=Myo5a PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Isoform 2 of Unconventional myosin-XV OS=Mus musculus OX=10090 GN=Myo15a; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2; Isoform 2 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Isoform 4 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2" 1 3 3 0.5024 0 1 1 1 494.94083 1482.80793 1482.80651 0.95 0.00047 0/0 0 0 14372644 HCD 30 MS2 26.52704 1331.3 110 45.2211 11655 11655 11648 QEplus033719.raw F4 1098.5 1020.6 1355.4 1654.8 1425.5 1433 321 2.11 12 FALSE 0.0015 0.02172 0.267 -250 44621 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FTEAGER [R].fTEAGER.[V] N-Term(TMT6plex) 1 Q9CQ06 "39S ribosomal protein L24, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl24 PE=1 SV=1" Q9CQ06 "39S ribosomal protein L24, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl24 PE=1 SV=1" 0 2 2 0.0106 0 1 1 1 519.77515 1038.54302 1038.54174 1.23 0.00064 0/0 0 0 13940534 HCD 30 MS2 33.11146 997 110 45.2236 11656 11656 11648 QEplus033719.raw F4 1015.3 820.4 1138.9 933.5 941.1 1133.1 147 1.88 1 FALSE 0.009517 0.1792 -0.117 -250 44628 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHLNAQAACTPR [R].aHLNAQAAcTPR.[R] N-Term(TMT6plex); C9(Carbamidomethyl) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.7909 0 1 1 1 769.9071 1538.80693 1538.80591 0.66 0.00051 0/0 0 0 13790872 HCD 30 MS2 19.4957 359.4 110 45.2261 11657 11657 11648 QEplus033719.raw F4 414.8 202.9 444.5 334.6 289.6 470.3 284 4.4 1 FALSE 1.14E-05 1.52E-10 1.963 -250 44657 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTNDSLMR [K].gTNDSLMR.[Q] N-Term(TMT6plex) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 2 2 0.5938 0 1 1 1 561.79285 1122.57842 1122.57747 0.84 0.00047 0/0 0 0 25517330 HCD 30 MS2 9.549165 659.7 42.061 45.2407 11662 11662 11659 QEplus033719.raw F4 782.9 324.6 598.5 820.3 520 912 160 2.56 1 FALSE 1.14E-05 0.0002569 0.778 -250 44662 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRGPPPSWGR [R].nRGPPPSWGR.[R] N-Term(TMT6plex) 3 P84104 Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3 PE=1 SV=1 P84104-2; P84104; Q9D6W4 Isoform Short of Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3; Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3 PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf3 PE=2 SV=1 1 3 3 0.5016 0 1 1 1 451.58484 1352.73996 1352.73848 1.09 0.00049 0/0 0 0 13778998 HCD 30 MS2 58.25338 782.6 66.085 45.243 11663 11663 11659 QEplus033719.raw F4 913.6 574.4 969.5 558.4 839.4 840.3 331 3.21 1 FALSE 3.35E-05 0.001281 0.64 -250 44682 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SKVEEEDTGDRPGASGAGNR [R].skVEEEDTGDRPGASGAGNR.[E] N-Term(TMT6plex); K2(TMT6plex) 2 E9QP49 EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1 E9QP49; A0A494BBL8 EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1; EH domain-binding protein 1-like protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1 1 4 4 0.4186 0 1 1 1 623.32068 2490.26088 2490.25848 0.97 0.0006 0/0 0 0 7727941.5 HCD 30 MS2 13.3549 353.8 110 45.2478 11665 11665 11659 QEplus033719.raw F4 383.3 160.4 355.7 485.6 188.9 548.7 266 3.87 1 FALSE 1.14E-05 8.65E-07 1.249 -250 44693 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASEEHLK [R].aSEEHLk.[Q] N-Term(TMT6plex); K7(TMT6plex) 4 E9PZF0 Nucleoside diphosphate kinase OS=Mus musculus OX=10090 GN=Gm20390 PE=3 SV=1 Q01768; Q8R4B4; E9PZF0; B0LAA8 Nucleoside diphosphate kinase B OS=Mus musculus OX=10090 GN=Nme2 PE=1 SV=1; Down syndrome cell adhesion molecule-like protein (Fragment) OS=Mus musculus OX=10090 GN=Dscaml1 PE=2 SV=1; Nucleoside diphosphate kinase OS=Mus musculus OX=10090 GN=Gm20390 PE=3 SV=1; Nucleoside diphosphate kinase (Fragment) OS=Mus musculus OX=10090 GN=Nme2 PE=2 SV=1 0 3 3 0.2028 0 1 1 1 424.58368 1271.73648 1271.73597 0.4 0.00017 0/0 0 0 66953052 HCD 30 MS2 51.93272 656.2 17.803 45.2526 11667 11667 11659 QEplus033719.raw F4 1156.8 411.7 643.6 734.5 564.3 426 356 2.86 1 FALSE 0.0002419 0.004966 0.502 -250 44720 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQPGAQGVK [K].gQPGAQGVk.[G] N-Term(TMT6plex); K9(TMT6plex) 3 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.5347 0 1 1 1 650.39386 1299.78044 1299.77851 1.49 0.00097 0/0 0 0 6454265 HCD 30 MS2 66.06272 575 110 45.267 11672 11672 11670 QEplus033719.raw F4 563.8 531.3 609.5 381.3 869.1 495.3 320 2.02 1 FALSE 0.001464 0.02112 0.272 -250 44738 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQPGAQGVK [K].gQPGAQGVk.[G] N-Term(TMT6plex); K9(TMT6plex) 3 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.5791 0 1 1 1 650.39386 1299.78044 1299.77851 1.49 0.00097 0/0 0 0 6454265 HCD 30 MS2 0 575 110 45.274 11675 11675 11670 QEplus033719.raw F4 563.8 531.3 609.5 381.3 869.1 495.3 320 3.16 1 FALSE 1.14E-05 5.94E-06 1.09 -250 44746 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQLAEEEAR [K].qQLAEEEAR.[R] N-Term(TMT6plex) 4 Q0GNC1 Inverted formin-2 OS=Mus musculus OX=10090 GN=Inf2 PE=1 SV=1 Q0GNC1; E9QLA5; Q0GNC1-3; A0A1Y7VM80 Inverted formin-2 OS=Mus musculus OX=10090 GN=Inf2 PE=1 SV=1; Inverted formin-2 OS=Mus musculus OX=10090 GN=Inf2 PE=1 SV=1; Isoform 2 of Inverted formin-2 OS=Mus musculus OX=10090 GN=Inf2; Inverted formin-2 (Fragment) OS=Mus musculus OX=10090 GN=Inf2 PE=1 SV=1 0 2 2 0.5664 0 1 1 1 651.84662 1302.68596 1302.68511 0.65 0.00043 0/0 0 0 6201884.5 HCD 30 MS2 14.45491 449.6 110 45.2765 11676 11676 11670 QEplus033719.raw F4 433.1 407.5 456.4 294.5 678.6 427.6 251 3.39 1 FALSE 1.14E-05 2.86E-05 0.961 -250 44759 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLVENNPR [K].sLVENNPR.[T] N-Term(TMT6plex) 4 Q8CHY3 Dymeclin OS=Mus musculus OX=10090 GN=Dym PE=1 SV=1 Q8CHY3; Q8CHY3-2; A0A494BA72; A0A494B9E2 Dymeclin OS=Mus musculus OX=10090 GN=Dym PE=1 SV=1; Isoform 2 of Dymeclin OS=Mus musculus OX=10090 GN=Dym; Dymeclin OS=Mus musculus OX=10090 GN=Dym PE=1 SV=1; Dymeclin OS=Mus musculus OX=10090 GN=Dym PE=1 SV=1 0 2 2 0.5272 0 1 1 1 579.32709 1157.6469 1157.6476 -0.61 -0.00035 0/0 0 0 5852691 HCD 30 MS2 0 452 110 45.2815 11678 11678 11670 QEplus033719.raw F4 490 301.5 496.2 458.7 390.4 575.3 188 2.94 1 FALSE 4.43E-05 0.001668 0.616 -250 44780 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDEHGFISR [R].qDEHGFISR.[E] N-Term(TMT6plex) 2 Q52L78 Alpha(B)-crystallin OS=Mus musculus OX=10090 GN=Cryab PE=1 SV=1 A0A1L1SRG5; Q52L78 Alpha-crystallin B chain (Fragment) OS=Mus musculus OX=10090 GN=Cryab PE=1 SV=1; Alpha(B)-crystallin OS=Mus musculus OX=10090 GN=Cryab PE=1 SV=1 0 2 2 0.5857 0 1 1 1 659.34167 1317.67607 1317.67488 0.91 0.0006 0/0 0 0 4572707 HCD 30 MS2 0 229.9 110 45.2938 11682 11682 11681 QEplus033719.raw F4 284.6 105.5 230 305.4 148.6 305 178 2.8 1 FALSE 1.14E-05 2.89E-05 0.96 -250 44785 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDESQLSPATR [R].nDESQLSPATR.[G] N-Term(TMT6plex) 31 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q499F9; Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q05CR3; Q9QXS1-9; E9Q9J6; Q9QXS1-5; E9PW24; A0A0R4J221; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; A0A0R4J223; Q8C8S5; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.6684 0 1 1 1 723.87354 1446.73979 1446.7386 0.82 0.0006 0/0 0 0 7160817.5 HCD 30 MS2 0 209.2 110 45.2963 11683 11683 11681 QEplus033719.raw F4 221.9 171 220.4 193.2 223.6 225.1 185 3.92 2 FALSE 1.14E-05 4.48E-07 1.304 -250 44801 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEEEQSSASVK [K].sEEEQSSASVk.[K] N-Term(TMT6plex); K11(TMT6plex) 6 Q9Z204-2; Q9Z204-3 Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc;Isoform 3 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc Q3U6P5; Q9Z204; Q9Z204-5; Q9Z204-2; Q9Z204-4; Q9Z204-3 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Hnrnpc PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc PE=1 SV=1; Isoform 5 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform 4 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform 3 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc 0 3 3 0.697 0 1 1 1 546.95831 1638.86039 1638.85867 1.05 0.00057 0/0 0 0 18064038 HCD 30 MS2 22.12577 584.4 80.305 45.3031 11686 11686 11681 QEplus033719.raw F4 623.2 557.3 608.4 404.5 719.2 593.6 303 4.62 2 FALSE 1.14E-05 4.45E-08 1.494 -250 44809 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGHPDASVTAK [R].qGHPDASVTAk.[G] N-Term(TMT6plex); K11(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 3 3 0.6298 0 1 1 1 523.63184 1568.88095 1568.87968 0.81 0.00043 0/0 0 0 15686836 HCD 30 MS2 0 822.1 105.702 45.3055 11687 11687 11681 QEplus033719.raw F4 1062.1 332.3 820.1 1161.2 372.5 1184.3 380 4.7 1 FALSE 1.14E-05 7.84E-07 1.257 -250 44833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AASGEAKPK [K].aASGEAkPk.[A] N-Term(TMT6plex); K7(TMT6plex); K9(TMT6plex) 5 P43274; Q1WWK3 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2;Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1 P43274; Q1WWK3; P43276; Q3U292; P43277 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2; Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1; Histone H1.5 OS=Mus musculus OX=10090 GN=H1-5 PE=1 SV=2; H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f3 PE=2 SV=1; Histone H1.3 OS=Mus musculus OX=10090 GN=H1-3 PE=1 SV=2 0 3 3 0.3094 0 1 1 1 515.99121 1545.95908 1545.95675 1.5 0.00078 0/0 0 0 8883429 HCD 30 MS2 45.9211 1072 84.222 45.3123 11690 11690 11681 QEplus033719.raw F4 1629.4 725.9 1220.4 565.7 873.9 1416.6 389 1.81 2 FALSE 0.0007056 0.01018 0.401 -250 44843 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVDPSVTR [K].qVDPSVTR.[R] N-Term(TMT6plex) 5 Q91VH6 Protein MEMO1 OS=Mus musculus OX=10090 GN=Memo1 PE=1 SV=1 A0A3B2WCC1; A0A3B2W4I2; Q91VH6; A0A3F2YNL8; Q3TWT2 Mediator of ErbB2-driven cell motility 1 (Fragment) OS=Mus musculus OX=10090 GN=Memo1 PE=1 SV=1; Mediator of ErbB2-driven cell motility 1 OS=Mus musculus OX=10090 GN=Memo1 PE=1 SV=1; Protein MEMO1 OS=Mus musculus OX=10090 GN=Memo1 PE=1 SV=1; Mediator of ErbB2-driven cell motility 1 OS=Mus musculus OX=10090 GN=Memo1 PE=1 SV=1; Mediator of ErbB2-driven cell motility 1 OS=Mus musculus OX=10090 GN=Memo1 PE=2 SV=1 0 2 2 0.5489 0 1 1 1 565.82294 1130.6386 1130.6367 1.68 0.00095 0/0 0 0 4833071 HCD 30 MS2 0 468.6 110 45.3148 11691 11691 11681 QEplus033719.raw F4 497.9 375.1 497.1 421.3 485.4 534.7 363 3.17 1 FALSE 1.14E-05 4.92E-05 0.916 -250 44852 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGHPPAVK [K].aGHPPAVk.[A] N-Term(TMT6plex); K8(TMT6plex) 1 Q91XC8 Death-associated protein 1 OS=Mus musculus OX=10090 GN=Dap PE=1 SV=3 Q91XC8 Death-associated protein 1 OS=Mus musculus OX=10090 GN=Dap PE=1 SV=3 0 3 3 0.5639 0 1 1 1 412.26038 1234.76657 1234.76721 -0.52 -0.00021 0/0 0 0 8076298.5 HCD 30 MS2 62.49437 778.2 110 45.3221 11693 11693 11692 QEplus033719.raw F4 910.6 554.8 840.2 647.7 784.1 931.6 245 3.05 1 FALSE 0.0002019 0.004022 0.527 -250 44877 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGQQLVASER [K].gGQQLVASER.[L] N-Term(TMT6plex) 2 D3YYU8 Obscurin-like protein 1 OS=Mus musculus OX=10090 GN=Obsl1 PE=1 SV=1 A0A0B4J1L4; D3YYU8 Obscurin-like protein 1 OS=Mus musculus OX=10090 GN=Obsl1 PE=1 SV=1; Obscurin-like protein 1 OS=Mus musculus OX=10090 GN=Obsl1 PE=1 SV=1 0 2 2 0.6156 0 1 1 1 637.35669 1273.7061 1273.70618 -0.06 -0.00004 0/0 0 0 7196242.5 HCD 30 MS2 48.51639 736.7 110 45.3336 11698 11698 11692 QEplus033719.raw F4 992.2 370.4 720.1 946.3 440.8 950.6 375 3.46 1 FALSE 1.14E-05 1.41E-08 1.589 -250 44885 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RIVAPPGGR [K].rIVAPPGGR.[S] N-Term(TMT6plex) 4 E9PWE8 Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 Q3TAS8; E9PWE8; Q62188; Q3TT92 Amidohydro-rel domain-containing protein OS=Mus musculus OX=10090 GN=Dpysl3 PE=2 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 1 3 3 0.4574 0 1 1 1 384.57935 1151.72348 1151.72104 2.12 0.00081 0/0 0 0 7100992 HCD 30 MS2 40.32825 629.4 107.207 45.336 11699 11699 11692 QEplus033719.raw F4 662.9 541.2 653.8 513.3 819.1 586.2 99 3.76 1 FALSE 1.14E-05 1.18E-06 1.224 -250 44902 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQAEEAER [R].lQAEEAER.[R] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.3323 0 1 1 1 587.81708 1174.62688 1174.62653 0.29 0.00017 0/0 0 0 17358850 HCD 30 MS2 14.66117 1117.5 110 45.3411 11701 11701 11692 QEplus033719.raw F4 1191.3 986.2 1176 1005.8 1132 1213.6 239 3.25 2 FALSE 1.14E-05 0.0001549 0.821 -250 44915 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGPAEGQLQENDR [K].gGPAEGQLQENDR.[V] N-Term(TMT6plex) 4 P39447 Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=2 P39447; A0A0U1RPB2; B9EHJ3; A0A0U1RPW2 Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=2; Tight junction protein ZO-1 (Fragment) OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=1; Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=1; Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=1 0 2 2 0.676 0 1 1 1 800.40161 1599.79595 1599.79243 2.2 0.00176 0/0 0 0 6015401 HCD 30 MS2 0 200.6 110 45.3507 11704 11704 11703 QEplus033719.raw F4 184.4 219.2 251 158.3 184.1 206.4 180 4.66 1 FALSE 1.14E-05 1.31E-13 2.545 -250 44922 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTESDVSK [K].dTESDVSk.[M] N-Term(TMT6plex); K8(TMT6plex) 34 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q6A0E9; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; MKIAA0004 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0004 PE=4 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 2 2 0.4475 0 1 1 1 669.86279 1338.71831 1338.7153 2.25 0.00151 0/0 0 0 7728547.5 HCD 30 MS2 25.11113 436.9 110 45.3532 11705 11705 11703 QEplus033719.raw F4 484.6 336.7 501.4 355.9 488.7 454.2 276 2.57 1 FALSE 1.14E-05 0.0001226 0.84 -250 44956 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGEAPDPEDPSR [R].dGEAPDPEDPSR.[K] N-Term(TMT6plex) 1 P24527 Leukotriene A-4 hydrolase OS=Mus musculus OX=10090 GN=Lta4h PE=1 SV=4 P24527 Leukotriene A-4 hydrolase OS=Mus musculus OX=10090 GN=Lta4h PE=1 SV=4 0 2 2 0.75 0 1 1 1 757.3515 1513.69573 1513.6968 -0.71 -0.00054 0/0 0 0 3027183.25 HCD 30 MS2 0 137.4 110 45.3652 11710 11710 11703 QEplus033719.raw F4 140.8 130.2 125.7 114.9 188.4 124.6 37 3.64 1 FALSE 1.14E-05 8.80E-06 1.058 -250 44962 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHSMSQEPPSK [K].sHSMSQEPPSk.[S] N-Term(TMT6plex); K11(TMT6plex) 2 Q91VX2 Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1 Q91VX2; A2AMY5 Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1; Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1 0 3 3 0.7988 0 1 1 1 558.29657 1672.87516 1672.87288 1.36 0.00076 0/0 0 0 1892727.625 HCD 30 MS2 0 240.6 110 45.3677 11711 11711 11703 QEplus033719.raw F4 269.6 184.6 239.1 219.7 277.3 253.5 280 4.97 1 FALSE 1.14E-05 3.32E-08 1.518 -250 44978 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQGEVQR [R].lQGEVQR.[L] N-Term(TMT6plex) 3 Q9QY76 Vesicle-associated membrane protein-associated protein B OS=Mus musculus OX=10090 GN=Vapb PE=1 SV=3 Q9QY76; Q3TU78; Q8BH80 "Vesicle-associated membrane protein-associated protein B OS=Mus musculus OX=10090 GN=Vapb PE=1 SV=3; MSP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Vapb PE=2 SV=1; Vesicle-associated membrane protein, associated protein B and C OS=Mus musculus OX=10090 GN=Vapb PE=1 SV=1" 0 2 2 0.25 0 1 1 1 529.81189 1058.6165 1058.61557 0.88 0.00046 0/0 0 0 20734598 HCD 30 MS2 16.49395 957.2 99.099 45.3819 11716 11716 11714 QEplus033719.raw F4 1085.5 712.9 917.5 899.3 1088.4 1039.7 257 2.12 1 FALSE 0.003159 0.06181 0.109 -250 44987 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERDDILR [K].eRDDILR.[S] N-Term(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 1 3 3 0.1261 0 1 1 1 382.55414 1145.64786 1145.6476 0.23 0.00009 0/0 0 0 35640680 HCD 30 MS2 36.2545 380.1 23.619 45.3886 11719 11719 11714 QEplus033719.raw F4 400.5 250.9 359.4 326.9 458.3 484.8 365 3.57 1 FALSE 8.67E-05 0.002873 0.563 -250 44996 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEEEQSSASVK [K].sEEEQSSASVk.[K] N-Term(TMT6plex); K11(TMT6plex) 6 Q9Z204-2; Q9Z204-3 Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc;Isoform 3 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc Q3U6P5; Q9Z204; Q9Z204-5; Q9Z204-2; Q9Z204-4; Q9Z204-3 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Hnrnpc PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc PE=1 SV=1; Isoform 5 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform 4 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform 3 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc 0 2 2 0.7917 0 1 1 1 819.93341 1638.85954 1638.85867 0.54 0.00044 0/0 0 0 31178138 HCD 30 MS2 12.91577 1003.3 64.915 45.3909 11720 11720 11714 QEplus033719.raw F4 1007.8 993.6 1041.1 734.6 1316.8 925.7 296 5.09 2 FALSE 1.14E-05 9.14E-10 1.814 -250 45001 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQLEEESK [KR].rQLEEESk.[A] N-Term(TMT6plex); K8(TMT6plex) 2 Q5SX39 Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1 Q5SX39; A2AQP0 Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin-7B OS=Mus musculus OX=10090 GN=Myh7b PE=3 SV=1 1 3 3 0.032 0 1 1 1 492.95251 1476.84299 1476.84223 0.52 0.00025 0/0 0 0 27374356 HCD 30 MS2 11.83922 1116.3 59.171 45.3931 11721 11721 11714 QEplus033719.raw F4 1410 688.7 887.2 1520.9 1196 994.7 478 2.19 1 FALSE 0.004707 0.08289 0.054 -250 45006 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQPGAQGVK [K].gQPGAQGVk.[G] N-Term(TMT6plex); K9(TMT6plex) 3 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 3 3 0.5285 0 1 1 1 433.93063 1299.77735 1299.77851 -0.89 -0.00039 0/0 0 0 8986440 HCD 30 MS2 41.71318 818.3 110 45.3956 11722 11722 11714 QEplus033719.raw F4 811.4 698.6 867.9 698.4 1003.7 829.6 371 4.03 1 FALSE 5.44E-05 0.002583 0.573 -250 45060 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEEAEYVR [R].qEEAEYVR.[A] N-Term(TMT6plex) 7 Q64010 Adapter molecule crk OS=Mus musculus OX=10090 GN=Crk PE=1 SV=1 Q5ND50; Q920I1; F7D232; Q8JZR2; Q64010; Q8BPE7; Q64010-2 Adapter molecule crk OS=Mus musculus OX=10090 GN=Crk PE=1 SV=2; CT-10 related kinase 3 OS=Mus musculus OX=10090 GN=Crk PE=2 SV=1; Adapter molecule crk (Fragment) OS=Mus musculus OX=10090 GN=Crk PE=1 SV=1; Adapter molecule crk OS=Mus musculus OX=10090 GN=Crk PE=1 SV=1; Adapter molecule crk OS=Mus musculus OX=10090 GN=Crk PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Crk PE=2 SV=1; Isoform Crk-I of Adapter molecule crk OS=Mus musculus OX=10090 GN=Crk 0 2 2 0.5564 0 1 1 1 626.8219 1252.63652 1252.6371 -0.46 -0.00029 0/0 0 0 11204970 HCD 30 MS2 28.38213 654.4 110 45.4195 11731 11731 11725 QEplus033719.raw F4 722 557.2 727.5 500.3 816.4 602.9 141 2.66 1 FALSE 1.14E-05 0.0004369 0.734 -250 45068 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYMSPER [R].sYMSPER.[L] N-Term(TMT6plex) 8 Q3TMJ8; Q91YS7 Mitogen activated protein kinase kinase 1 OS=Mus musculus OX=10090 GN=Map2k1 PE=1 SV=1;Dual-specificity mitogen-activated protein kinase kinase 2 OS=Mus musculus OX=10090 GN=Map2k2 PE=1 SV=1 Q3TMW4; Q3TMJ8; Q91YS7; Q3U3F4; Q63932; Q9JJE1; A0A1W2P7V9; Q3UK05 "Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Map2k1 PE=2 SV=1; Mitogen activated protein kinase kinase 1 OS=Mus musculus OX=10090 GN=Map2k1 PE=1 SV=1; Dual-specificity mitogen-activated protein kinase kinase 2 OS=Mus musculus OX=10090 GN=Map2k2 PE=1 SV=1; Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Map2k1 PE=2 SV=1; Dual specificity mitogen-activated protein kinase kinase 2 OS=Mus musculus OX=10090 GN=Map2k2 PE=1 SV=2; Brain cDNA, clone MNCb-1208, similar to Mus musculus mitogen activated protein kinase kinase 1 (Map2k1), mRNA OS=Mus musculus OX=10090 GN=Map2k1 PE=2 SV=1; Dual-specificity mitogen-activated protein kinase kinase 2 (Fragment) OS=Mus musculus OX=10090 GN=Map2k2 PE=1 SV=1; Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Map2k1 PE=2 SV=1" 0 2 2 0.5385 0 1 1 1 549.77692 1098.54656 1098.54511 1.32 0.00072 0/0 0 0 7239686.5 HCD 30 MS2 22.96834 845.3 110 45.422 11732 11732 11725 QEplus033719.raw F4 890.5 566 951.6 803.7 737.9 1122.3 82 1.95 2 FALSE 0.001938 0.03312 0.202 -250 45090 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGVYNPNK [K].hGVYNPNk.[I] N-Term(TMT6plex); K8(TMT6plex) 3 P08249 "Malate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Mdh2 PE=1 SV=3" A0A0G2JGY4; A0A0G2JF23; P08249 "Malate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Mdh2 PE=1 SV=1; Malate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Mdh2 PE=1 SV=1; Malate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Mdh2 PE=1 SV=3" 0 3 3 0.4119 0 1 1 1 462.93549 1386.7919 1386.7894 1.8 0.00083 0/0 0 0 5561876.5 HCD 30 MS2 7.031407 538.5 110 45.4368 11737 11737 11736 QEplus033719.raw F4 594 387.4 486.9 578.5 643 541.3 398 3.69 1 FALSE 1.14E-05 0.0001994 0.8 -250 45098 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEDTSAGTGDPPRK [K].eEDTSAGTGDPPRk.[K] N-Term(TMT6plex); K14(TMT6plex) 4 P56399 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 P56399; Q3U4W8; D3Z4K7; D3YYA5 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase 5 (Fragment) OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=8; Ubiquitin carboxyl-terminal hydrolase 5 (Fragment) OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 1 3 3 0.8032 0 1 1 1 640.00299 1917.99442 1917.99181 1.36 0.00087 0/0 0 0 2556558.5 HCD 30 MS2 38.35746 274.5 110 45.4394 11738 11738 11736 QEplus033719.raw F4 299.4 210.8 301.6 209.3 341.8 284.1 285 3.71 1 FALSE 1.14E-05 2.58E-08 1.539 -250 45103 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DMAMDSCR [R].dMAMDScR.[Q] N-Term(TMT6plex); C7(Carbamidomethyl) 1 Q9R0E1 Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Mus musculus OX=10090 GN=Plod3 PE=1 SV=1 Q9R0E1 Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Mus musculus OX=10090 GN=Plod3 PE=1 SV=1 0 2 2 0.9962 0 1 1 1 607.76208 1214.51689 1214.51653 0.3 0.00018 0/0 0 0 20202880 HCD 30 MS2 0 749.8 110 45.4464 11741 11741 11736 QEplus033719.raw F4 823.3 696.6 841.8 577.3 884.6 675.3 6 2.65 1 FALSE 0.0001504 0.003282 0.549 -250 45105 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVDSEYEAR [R].eVDSEYEAR.[S] N-Term(TMT6plex) 3 Q99K28 ADP-ribosylation factor GTPase-activating protein 2 OS=Mus musculus OX=10090 GN=Arfgap2 PE=1 SV=1 Q99K28-2; Q99K28; Q3UR67 Isoform 2 of ADP-ribosylation factor GTPase-activating protein 2 OS=Mus musculus OX=10090 GN=Arfgap2; ADP-ribosylation factor GTPase-activating protein 2 OS=Mus musculus OX=10090 GN=Arfgap2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Arfgap2 PE=2 SV=1 0 2 2 0.7225 0 1 1 1 663.82312 1326.63896 1326.63749 1.11 0.00074 0/0 0 0 4481421 HCD 30 MS2 0 341.9 110 45.4489 11742 11742 11736 QEplus033719.raw F4 385.3 289.8 391.5 261.6 364.9 358.3 76 4 1 FALSE 1.14E-05 1.64E-06 1.196 -250 45115 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IRDPNQGGK [R].iRDPNQGGk.[D] N-Term(TMT6plex); K9(TMT6plex) 32 E9PVC5; Z4YKC4 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1;Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3 PE=1 SV=1 A0A0J9YUL1; D3YWY7; Q3UZD9; Q8BUW8; Q6NZJ6-2; A0PJB5; A0A0J9YVC1; E9Q9E1; Q80XI3-2; Q80XI3-3; D3YWM1; A2AMI6; Q3UQI5; Q3UYM6; E9Q770; E9PVC5; Z4YKC4; E9PVC6; A0A338P758; A2AMI2; Q80XI3; A2AMI4; A0A0J9YTV0; A0A0J9YUC1; Q80XI3-4; Q8BQR8; D3Z439; A0A0R4J112; Q6NZJ6; A0A0N4SVL0; A0A0J9YU44; Q3UTK0 Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3; Isoform 3 of Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3 PE=1 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3 PE=1 SV=2; Eukaryotic translation initiation factor 4 gamma 3 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g3 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Isoform 4 of Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3; Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3 PE=1 SV=2; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 1 3 3 0.6011 0 1 1 1 481.62122 1442.84909 1442.84798 0.77 0.00037 0/0 0 0 13840701 HCD 30 MS2 28.9444 1042.9 110 45.4536 11744 11744 11736 QEplus033719.raw F4 1316.8 698.8 1045 1010.3 1200 986.3 335 3.71 2 FALSE 1.14E-05 2.84E-05 0.961 -250 45135 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGPAEGQLQENDR [K].gGPAEGQLQENDR.[V] N-Term(TMT6plex) 4 P39447 Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=2 P39447; A0A0U1RPB2; B9EHJ3; A0A0U1RPW2 Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=2; Tight junction protein ZO-1 (Fragment) OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=1; Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=1; Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=1 0 3 3 0.7045 0 1 1 1 533.93726 1599.79721 1599.79243 2.99 0.0016 0/0 0 0 7026482.5 HCD 30 MS2 11.08875 437.3 110 45.4659 11748 11748 11747 QEplus033719.raw F4 454.9 381.7 443.3 363.9 552.2 427.6 175 4.4 1 FALSE 1.14E-05 2.02E-05 0.99 -250 45140 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERDDILR [K].eRDDILR.[S] N-Term(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 1 2 2 0.1124 0 1 1 1 573.32764 1145.648 1145.6476 0.34 0.0002 0/0 0 0 8024859 HCD 30 MS2 13.48465 635.7 110 45.4684 11749 11749 11747 QEplus033719.raw F4 678.3 398.9 696.1 591.2 598.2 851.5 365 2.67 1 FALSE 0.001117 0.01465 0.337 -250 45155 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIHDVCR [K].vIHDVcR.[N] N-Term(TMT6plex); C6(Carbamidomethyl) 3 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q3TNW1 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1 0 3 3 0.7179 0 1 1 1 376.54474 1127.61966 1127.61928 0.34 0.00013 0/0 0 0 4925193 HCD 30 MS2 62.58705 669 110 45.4734 11751 11751 11747 QEplus033719.raw F4 692.8 535.3 711.9 605.2 751.8 717.2 148 2.34 1 FALSE 0.001421 0.02031 0.278 -250 45164 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSGAAQDEAGLAR [K].gSGAAQDEAGLAR.[S] N-Term(TMT6plex) 2 P33215 Protein NEDD1 OS=Mus musculus OX=10090 GN=Nedd1 PE=1 SV=2 P33215-2; P33215 Isoform 2 of Protein NEDD1 OS=Mus musculus OX=10090 GN=Nedd1; Protein NEDD1 OS=Mus musculus OX=10090 GN=Nedd1 PE=1 SV=2 0 2 2 0.6374 0 1 1 1 716.37109 1431.73491 1431.73894 -2.81 -0.00201 0/0 0 0 4789076 HCD 30 MS2 0 231.5 110 45.4759 11752 11752 11747 QEplus033719.raw F4 246.2 136.5 218.4 270.2 205.6 312.2 218 2.73 1 FALSE 1.14E-05 2.63E-08 1.537 -250 45172 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNSSDAPGEESSSETEK [K].sNSSDAPGEESSSETEk.[E] N-Term(TMT6plex); K17(TMT6plex) 5 Q9JIK5 Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3 Q8K2L4; Q6PCP0; Q9JIK5; Q3ULC7; Q9CWZ5 RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=1; Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=2 0 3 3 0.8618 0 1 1 1 733.68207 2199.03165 2199.0301 0.7 0.00052 0/0 0 0 9716578 HCD 30 MS2 0 152.2 110 45.4784 11753 11753 11747 QEplus033719.raw F4 161.2 134.6 173.1 118.5 174.7 151.1 78 5.57 1 FALSE 1.14E-05 6.31E-16 3.013 -250 45178 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TRNEMTAEEK [R].tRNEMTAEEk.[R] N-Term(TMT6plex); K10(TMT6plex) 2 G3X956 FACT complex subunit OS=Mus musculus OX=10090 GN=Supt16 PE=1 SV=1 G3X956; Q920B9 FACT complex subunit OS=Mus musculus OX=10090 GN=Supt16 PE=1 SV=1; FACT complex subunit SPT16 OS=Mus musculus OX=10090 GN=Supt16h PE=1 SV=2 1 3 3 0.467 0 1 1 1 556.3006 1666.88724 1666.88344 2.28 0.00127 0/0 0 0 9358138 HCD 30 MS2 28.22545 626.7 110 45.4809 11754 11754 11747 QEplus033719.raw F4 664.1 612 659.4 452.5 776.9 595.5 323 3.64 1 FALSE 1.14E-05 1.48E-07 1.395 -250 45184 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDQNYEK [K].tDQNYEk.[M] N-Term(TMT6plex); K7(TMT6plex) 3 Q8BMJ2 "Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2" Q6ZPT2; Q8BMJ2; Q99JK2 "Leucyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1; Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2; Lars protein OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1" 0 2 2 0.5858 0 1 1 1 678.36523 1355.72319 1355.72072 1.83 0.00124 0/0 0 0 7785235.5 HCD 30 MS2 0 605.4 110 45.4835 11755 11755 11747 QEplus033719.raw F4 783.1 472.8 650.5 614.2 567.5 544.6 225 3.09 1 FALSE 0.0002218 0.0047 0.509 -250 45189 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YMEGHHVK [R].yMEGHHVk.[D] N-Term(TMT6plex); K8(TMT6plex) 1 Q9D880 Mitochondrial import inner membrane translocase subunit TIM50 OS=Mus musculus OX=10090 GN=Timm50 PE=1 SV=1 Q9D880 Mitochondrial import inner membrane translocase subunit TIM50 OS=Mus musculus OX=10090 GN=Timm50 PE=1 SV=1 0 4 4 0.5901 0 1 1 1 365.4534 1458.79177 1458.79278 -0.69 -0.00025 0/0 0 0 5967059 HCD 30 MS2 62.17455 687.8 110 45.4859 11756 11756 11747 QEplus033719.raw F4 693.6 509.8 798.3 655.4 618.4 851 322 2.83 1 FALSE 0.0007626 0.01064 0.394 -250 45215 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANWEAQQR [K].aNWEAQQR.[I] N-Term(TMT6plex) 5 E9Q1G8 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2 E9Q1G8; Q8C2A3; E9Q9F5; Q3UNN1; O55131 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin-7 OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=1 0 2 2 0.5368 0 1 1 1 616.32269 1231.63811 1231.6381 0.01 0 0/0 0 0 80449456 HCD 30 MS2 18.74585 762.5 25.754 45.498 11760 11760 11758 QEplus033719.raw F4 733.1 727.7 877.1 637.1 851.9 747.9 188 2.85 1 FALSE 0.0002019 0.004212 0.521 -250 45222 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGIPPDQQR [K].eGIPPDQQR.[LV] N-Term(TMT6plex) 18 P62984; P62983 Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2;Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2 E9Q5F6; P62984; Q922Z8; Q922B0; Q3TH47; Q5SX22; E9Q4P0; P62983; Q78XY9; E9Q9J0; Q8R0Z9; B0LAC2; Q8C2K3; Q8VC46; A5JUZ1; A0A0A6YW67; E9QNP0; P0CG50 Polyubiquitin-C (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=1; Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Polyubiquitin-B (Fragment) OS=Mus musculus OX=10090 GN=Ubb PE=4 SV=2; KxDL motif-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2; Ubiquitin B OS=Mus musculus OX=10090 GN=Ubb PE=2 SV=1; 60S ribosomal protein L40 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=3 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiquitin A-52 residue ribosomal protein fusion product 1 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubb-ps PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiqutin subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Predicted pseudogene 8797 OS=Mus musculus OX=10090 GN=Gm8797 PE=4 SV=1; 60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Polyubiquitin-C OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=2 0 2 2 0.6689 0 1 1 1 634.84351 1268.67974 1268.67963 0.08 0.00005 0/0 0 0 35384892 HCD 30 MS2 2.887322 586.5 60.494 45.5003 11761 11761 11758 QEplus033719.raw F4 568.4 502.1 630.3 437.9 709.3 670.8 285 2.96 2 FALSE 5.44E-05 0.001862 0.605 -250 45241 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REEAAVDAQQQK [R].rEEAAVDAQQQk.[R] N-Term(TMT6plex); K12(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.6756 0 1 1 1 611.00751 1831.00797 1831.0074 0.31 0.00019 0/0 0 0 6534096.5 HCD 30 MS2 0 427.3 110 45.5078 11764 11764 11758 QEplus033719.raw F4 542 346.8 445.6 331.7 444.5 453.1 421 5.58 2 FALSE 1.14E-05 1.54E-13 2.531 -250 45254 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YGEQGLR [R].yGEQGLR.[E] N-Term(TMT6plex) 2 Q3TFF0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja2 PE=2 SV=1 Q3TFF0; Q9QYJ0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja2 PE=2 SV=1; DnaJ homolog subfamily A member 2 OS=Mus musculus OX=10090 GN=Dnaja2 PE=1 SV=1 0 2 2 0.4701 0 1 1 1 526.29077 1051.57427 1051.57337 0.85 0.00045 0/0 0 0 24017850 HCD 30 MS2 16.41267 772.5 71.031 45.5126 11766 11766 11758 QEplus033719.raw F4 931.7 528.4 788.5 771.6 691.4 923.3 167 2.34 1 FALSE 0.00116 0.01547 0.327 -250 45262 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNQPMTPEAVR [K].rNQPMTPEAVR.[D] N-Term(TMT6plex) 3 P51660 Peroxisomal multifunctional enzyme type 2 OS=Mus musculus OX=10090 GN=Hsd17b4 PE=1 SV=3 P51660; Q3TT11; Q3UHW2 Peroxisomal multifunctional enzyme type 2 OS=Mus musculus OX=10090 GN=Hsd17b4 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsd17b4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsd17b4 PE=2 SV=1 1 3 3 0.6102 0 1 1 1 509.94733 1527.82743 1527.82631 0.73 0.00037 0/0 0 0 14093766 HCD 30 MS2 25.44531 608.9 110 45.5151 11767 11767 11758 QEplus033719.raw F4 652.1 485.7 670.4 504.2 661.5 679.6 307 5.31 1 FALSE 1.14E-05 4.03E-11 2.072 -250 45269 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAAEDAIR [K].tAAEDAIR.[N] N-Term(TMT6plex) 13 F7BGR7 Predicted gene 21992 OS=Mus musculus OX=10090 GN=Gm21992 PE=4 SV=1 S4R1A6; F7BGR7; A0A494BB78; Q8VE92; F6TBN8; A0A494BAP6; Q8C7Q4-2; Q5CZX8; Q8C7Q4; Q61954; A0A494B9C0; A1L3S3; A0A494B9W4 RNA-binding protein 4B OS=Mus musculus OX=10090 GN=Rbm4b PE=4 SV=1; Predicted gene 21992 OS=Mus musculus OX=10090 GN=Gm21992 PE=4 SV=1; RNA-binding protein 4 OS=Mus musculus OX=10090 GN=Rbm4 PE=4 SV=1; RNA-binding protein 4B OS=Mus musculus OX=10090 GN=Rbm4b PE=1 SV=1; RNA-binding protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Rbm4 PE=4 SV=2; RNA-binding protein 4B OS=Mus musculus OX=10090 GN=Rbm4b PE=4 SV=1; Isoform 2 of RNA-binding protein 4 OS=Mus musculus OX=10090 GN=Rbm4; RNA-binding protein 4 OS=Mus musculus OX=10090 GN=Rbm4 PE=2 SV=1; RNA-binding protein 4 OS=Mus musculus OX=10090 GN=Rbm4 PE=1 SV=1; Neosin (Fragment) OS=Mus musculus OX=10090 GN=Rbm4b PE=2 SV=1; RNA-binding protein 4B OS=Mus musculus OX=10090 GN=Rbm4b PE=4 SV=1; RNA binding motif protein 4 OS=Mus musculus OX=10090 GN=Rbm4 PE=2 SV=1; RNA-binding protein 4B (Fragment) OS=Mus musculus OX=10090 GN=Rbm4b PE=1 SV=1 0 2 2 0.2609 0 1 1 1 538.30078 1075.59429 1075.5945 -0.2 -0.00011 0/0 0 0 8356762 HCD 30 MS2 52.73228 940.6 110 45.5176 11768 11768 11758 QEplus033719.raw F4 1218.2 767.1 1030.4 753 891.9 983.3 236 2.3 1 FALSE 4.43E-05 0.001527 0.624 -250 45275 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HKQEADDIVR [R].hkQEADDIVR.[V] N-Term(TMT6plex); K2(TMT6plex) 4 F8VQJ3 Laminin subunit gamma-1 OS=Mus musculus OX=10090 GN=Lamc1 PE=1 SV=1 Q3TRH4; F8VQJ3; Q3URV4; P02468 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lamc1 PE=2 SV=1; Laminin subunit gamma-1 OS=Mus musculus OX=10090 GN=Lamc1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lamc1 PE=2 SV=1; Laminin subunit gamma-1 OS=Mus musculus OX=10090 GN=Lamc1 PE=1 SV=2 1 4 4 0.6148 0 1 1 1 417.99124 1668.94314 1668.94334 -0.12 -0.00005 0/0 0 0 10335762 HCD 30 MS2 20.91486 429.5 110 45.5249 11770 11770 11769 QEplus033719.raw F4 460 344.8 463.1 334.2 465.4 509.8 409 4.05 1 FALSE 1.14E-05 2.04E-05 0.989 -250 45281 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGTEEEDSFR [R].qGTEEEDSFR.[S] N-Term(TMT6plex) 5 Q3ULW8 Protein mono-ADP-ribosyltransferase PARP3 OS=Mus musculus OX=10090 GN=Parp3 PE=2 SV=1 Q3ULW8-2; A0A5H1ZRP0; Q3ULW8; A0A5H1ZRL8; A0A5H1ZRL5 Isoform 2 of Protein mono-ADP-ribosyltransferase PARP3 OS=Mus musculus OX=10090 GN=Parp3; Poly [ADP-ribose] polymerase (Fragment) OS=Mus musculus OX=10090 GN=Parp3 PE=1 SV=1; Protein mono-ADP-ribosyltransferase PARP3 OS=Mus musculus OX=10090 GN=Parp3 PE=2 SV=1; Protein mono-ADP-ribosyltransferase PARP3 (Fragment) OS=Mus musculus OX=10090 GN=Parp3 PE=1 SV=1; Protein mono-ADP-ribosyltransferase PARP3 (Fragment) OS=Mus musculus OX=10090 GN=Parp3 PE=1 SV=1 0 2 2 0.7923 0 1 1 1 713.83649 1426.6657 1426.66477 0.65 0.00046 0/0 0 0 5804300.5 HCD 30 MS2 32.0669 236.7 110 45.5274 11771 11771 11769 QEplus033719.raw F4 244.7 125 297.3 273.6 117.9 361.5 42 3.37 1 FALSE 1.14E-05 1.61E-06 1.198 -250 45290 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEHGFIGCR [R].gEHGFIGcR.[K] N-Term(TMT6plex); C8(Carbamidomethyl) 3 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 A0A0G2JDU7; F7BDR1; Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=1; Fascin (Fragment) OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=1; Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 0 3 3 0.7143 0 1 1 1 421.215 1261.63044 1261.63091 -0.37 -0.00016 0/0 0 0 39857504 HCD 30 MS2 13.86108 235.5 23.304 45.5319 11773 11773 11769 QEplus033719.raw F4 263 208 261.5 197.7 289.6 193 128 3.71 1 FALSE 1.14E-05 4.29E-05 0.927 -250 45293 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AACREEIQSNAVR [K].aAcREEIQSNAVR.[S] N-Term(TMT6plex); C3(Carbamidomethyl) 3 A0A571BDS0 Xin actin-binding repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Xirp1 PE=1 SV=2 A0A571BDS0; O70373; E9QQ93 Xin actin-binding repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Xirp1 PE=1 SV=2; Xin actin-binding repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Xirp1 PE=1 SV=2; Xin actin-binding repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Xirp1 PE=1 SV=2 1 3 3 0.5617 0 1 1 1 578.30353 1732.89603 1732.89618 -0.09 -0.00005 0/0 0 0 7797400.5 HCD 30 MS2 18.41611 341.1 110 45.5344 11774 11774 11769 QEplus033719.raw F4 375.6 175.3 389.8 379 251.4 475.8 273 3.97 1 FALSE 1.14E-05 4.40E-12 2.255 -250 45297 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEHGFIGCR [R].gEHGFIGcR.[K] N-Term(TMT6plex); C8(Carbamidomethyl) 3 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 A0A0G2JDU7; F7BDR1; Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=1; Fascin (Fragment) OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=1; Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 0 2 2 0.588 0 1 1 1 631.3183 1261.62932 1261.63091 -1.26 -0.00079 0/0 0 0 4929177 HCD 30 MS2 11.60675 434.9 110 45.5369 11775 11775 11769 QEplus033719.raw F4 452.4 412.4 457 355.7 498.7 433.3 124 3.01 1 FALSE 1.14E-05 5.04E-05 0.914 -250 45312 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEEDMK [K].sEEDMk.[G] N-Term(TMT6plex); K6(TMT6plex) 2 P04247 Myoglobin OS=Mus musculus OX=10090 GN=Mb PE=1 SV=3 A0A2R8VK58; P04247 Myoglobin (Fragment) OS=Mus musculus OX=10090 GN=Mb PE=1 SV=1; Myoglobin OS=Mus musculus OX=10090 GN=Mb PE=1 SV=3 0 2 2 0.254 0 1 1 1 598.8158 1196.62432 1196.62331 0.84 0.0005 0/0 0 0 22087328 HCD 30 MS2 0 1392.5 110 45.5417 11777 11777 11769 QEplus033719.raw F4 3455.6 151.4 620.8 2317.8 205.3 1604.3 197 1.89 1 FALSE 0.006658 0.1056 -0.009 -250 45319 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERDDILR [K].eRDDILR.[S] N-Term(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 1 2 2 0.1221 0 1 1 1 573.32623 1145.64519 1145.6476 -2.11 -0.00121 0/0 0 0 8696292 HCD 30 MS2 5.505385 741 110 45.5442 11778 11778 11769 QEplus033719.raw F4 821.4 573.8 755.7 615 846 834.1 359 2.13 1 FALSE 0.005197 0.08893 0.037 -250 45327 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTAAPTDPTDGP [R].hTAAPTDPTDGP.[-] N-Term(TMT6plex) 2 Q0VEW4 Proteolipid protein 2 OS=Mus musculus OX=10090 GN=Plp2 PE=1 SV=1 Q0VEW4; Q58E29 Proteolipid protein 2 OS=Mus musculus OX=10090 GN=Plp2 PE=1 SV=1; Proteolipid protein 2 OS=Mus musculus OX=10090 GN=Plp2 PE=2 SV=1 0 2 2 0.5197 0 1 1 1 704.84991 1408.69255 1408.69059 1.39 0.00098 0/0 0 0 4616852.5 HCD 30 MS2 16.36163 237.1 110 45.5467 11779 11779 11769 QEplus033719.raw F4 249.2 190.9 241.1 230.3 236.2 275.1 122 2.54 1 FALSE 1.14E-05 6.65E-05 0.891 -250 45336 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKEEELR [K].akEEELR.[K] N-Term(TMT6plex); K2(TMT6plex) 3 Q60749 "KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Mus musculus OX=10090 GN=Khdrbs1 PE=1 SV=2" A0A2R8VHM1; Q9R226; Q60749 "KH domain-containing, RNA-binding, signal transduction-associated protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Khdrbs3 PE=1 SV=1; KH domain-containing, RNA-binding, signal transduction-associated protein 3 OS=Mus musculus OX=10090 GN=Khdrbs3 PE=1 SV=1; KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Mus musculus OX=10090 GN=Khdrbs1 PE=1 SV=2" 1 2 2 0.2986 0 1 1 1 666.89691 1332.78655 1332.78874 -1.64 -0.00109 0/0 0 0 5974271 HCD 30 MS2 0 337.5 110 45.554 11781 11781 11780 QEplus033719.raw F4 342.2 326.8 353.4 331.3 362.3 308.8 514 2.11 1 FALSE 0.002024 0.03537 0.192 -250 45343 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTGDNQPK [K].vTGDNQPk.[E] N-Term(TMT6plex); K8(TMT6plex) 5 F8VQC1 Signal recognition particle subunit SRP72 OS=Mus musculus OX=10090 GN=Srp72 PE=1 SV=1 A0JLN1; Q3UZL8; E9Q740; F8VQC1; A0PJ97 Srp72 protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1; Signal recognition particle subunit SRP72 OS=Mus musculus OX=10090 GN=Srp72 PE=1 SV=1; Signal recognition particle subunit SRP72 OS=Mus musculus OX=10090 GN=Srp72 PE=1 SV=1; Srp72 protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1 0 2 2 0.22 0 1 1 1 658.88202 1316.75676 1316.75744 -0.51 -0.00034 0/0 0 0 1906829.125 HCD 30 MS2 77.18629 248.4 110 45.5566 11782 11782 11780 QEplus033719.raw F4 364.1 184.4 298.7 195.2 185.9 262.3 409 2.5 1 FALSE 1.14E-05 0.0004986 0.722 -250 45350 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCVAIAADRR [K].ncVAIAADRR.[F] N-Term(TMT6plex); C2(Carbamidomethyl) 1 Q545G0 Proteasome subunit beta OS=Mus musculus OX=10090 GN=Psmb3 PE=1 SV=1 Q545G0 Proteasome subunit beta OS=Mus musculus OX=10090 GN=Psmb3 PE=1 SV=1 1 3 3 0.3448 0 1 1 1 458.92062 1374.74732 1374.74733 -0.01 0 0/0 0 0 40915828 HCD 30 MS2 36.01831 608.1 25.236 45.5588 11783 11783 11780 QEplus033719.raw F4 687.8 440.4 601.2 431.2 775.9 712.3 317 4.96 1 FALSE 1.14E-05 5.10E-10 1.863 -250 45389 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPQAGLGPR [R].gPQAGLGPR.[R] N-Term(TMT6plex) 7 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 Q3UZD9; Q3UQI5; Q3UYM6; E9Q770; E9PVC5; Q6EVH9; Q3UTK0 MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; eIF4GI protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 0 2 2 0.2802 0 1 1 1 541.31982 1081.63237 1081.63156 0.75 0.00041 0/0 0 0 12712669 HCD 30 MS2 43.0349 1224.9 107.106 45.5705 11788 11788 11780 QEplus033719.raw F4 1448.1 860.2 1331.2 1168.2 1203.1 1338.4 101 2.32 1 FALSE 7.59E-05 0.002794 0.565 -250 45400 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTPQDLAR [R].gTPQDLAR.[A] N-Term(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.2723 0 1 1 1 543.80914 1086.61101 1086.61049 0.48 0.00026 0/0 0 0 11517813 HCD 30 MS2 14.88088 933.7 110 45.5755 11790 11790 11780 QEplus033719.raw F4 1022.2 847.6 1012.3 700.6 1129.2 890.5 189 2.13 1 FALSE 1.14E-05 0.0003224 0.759 -250 45413 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGSTLDGVSR [K].sGSTLDGVSR.[K] N-Term(TMT6plex) 9 Q5BKS1 "Solute carrier family 4 (Anion exchanger), member 1, adaptor protein OS=Mus musculus OX=10090 GN=Slc4a1ap PE=2 SV=2" Q5BKS1; E9Q1Q0; O54716; A0A0J9YTU2; Q6GQW1; E9PX68; E9Q585; Q3UUI2; Q3UHY0 "Solute carrier family 4 (Anion exchanger), member 1, adaptor protein OS=Mus musculus OX=10090 GN=Slc4a1ap PE=2 SV=2; Solute carrier family 4 (anion exchanger), member 1, adaptor protein OS=Mus musculus OX=10090 GN=Slc4a1ap PE=1 SV=1; Kanadaptin OS=Mus musculus OX=10090 GN=Slc4a1ap PE=2 SV=1; Solute carrier family 4 (anion exchanger), member 1, adaptor protein (Fragment) OS=Mus musculus OX=10090 GN=Slc4a1ap PE=1 SV=1; Slc4a1ap protein (Fragment) OS=Mus musculus OX=10090 GN=Slc4a1ap PE=2 SV=1; Solute carrier family 4 (anion exchanger), member 1, adaptor protein OS=Mus musculus OX=10090 GN=Slc4a1ap PE=1 SV=1; Solute carrier family 4 (anion exchanger), member 1, adaptor protein OS=Mus musculus OX=10090 GN=Slc4a1ap PE=1 SV=1; FHA domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Slc4a1ap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc4a1ap PE=2 SV=1" 0 2 2 0.5076 0 1 1 1 604.32983 1207.65239 1207.648 3.64 0.0022 0/0 0 0 4131557.25 HCD 30 MS2 77.29567 637 110 45.5854 11793 11793 11791 QEplus033719.raw F4 649.4 570.2 743 452.4 756.3 650.6 268 2.64 1 FALSE 1.14E-05 0.0001334 0.833 -250 45422 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGQTIER [R].vGQTIER.[M] N-Term(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; Q9D0E1-2; Q3TQ66; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 2 2 0.2973 0 1 1 1 516.30634 1031.60539 1031.60467 0.7 0.00036 0/0 0 0 188418432 HCD 30 MS2 6.552725 597.1 7.238 45.5876 11794 11794 11791 QEplus033719.raw F4 618.6 613.2 691.2 372.4 692.9 594.3 238 2.59 1 FALSE 0.0009259 0.01272 0.363 -250 45431 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAFPNTNR [R].qAFPNTNR.[W] N-Term(TMT6plex) 2 Q9D8N0 Elongation factor 1-gamma OS=Mus musculus OX=10090 GN=Eef1g PE=1 SV=3 Q8R1N8; Q9D8N0 Eef1g protein OS=Mus musculus OX=10090 GN=Eef1g PE=2 SV=1; Elongation factor 1-gamma OS=Mus musculus OX=10090 GN=Eef1g PE=1 SV=3 0 2 2 0.3188 0 1 1 1 588.82019 1176.6331 1176.63229 0.7 0.00041 0/0 0 0 83111800 HCD 30 MS2 29.67801 650.7 13.1 45.5899 11795 11795 11791 QEplus033719.raw F4 661.1 488.5 714.8 602.8 658.2 778.7 306 2.29 1 FALSE 3.35E-05 0.001289 0.639 -250 45449 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENPYYDSR [R].eNPYYDSR.[V] N-Term(TMT6plex) 4 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 Q80U89; Q68FD5; Q5SXR6; Q3UPJ3 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1 0 2 2 0.5942 0 1 1 1 636.80682 1272.60637 1272.6058 0.45 0.00029 0/0 0 0 26221884 HCD 30 MS2 19.06131 965.9 81.471 45.5944 11797 11797 11791 QEplus033719.raw F4 973.7 924.6 1138.6 857.8 1000.1 900.4 48 3.13 1 FALSE 0.0002218 0.004491 0.514 -250 45457 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QCVIDDR [K].qcVIDDR.[A] N-Term(TMT6plex); C2(Carbamidomethyl) 2 P62071 Ras-related protein R-Ras2 OS=Mus musculus OX=10090 GN=Rras2 PE=1 SV=1 P62071; A0A1B0GRT5 Ras-related protein R-Ras2 OS=Mus musculus OX=10090 GN=Rras2 PE=1 SV=1; Ras-related protein R-Ras2 OS=Mus musculus OX=10090 GN=Rras2 PE=1 SV=1 0 2 2 0.3985 0 1 1 1 567.79205 1134.57683 1134.57747 -0.57 -0.00032 0/0 0 0 11282289 HCD 30 MS2 20.83746 610.4 110 45.5969 11798 11798 11791 QEplus033719.raw F4 601 476.5 729.2 533.1 605.9 716.6 130 2.71 1 FALSE 0.0003496 0.006633 0.465 -250 45465 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVEQEESK [R].sVEQEESk.[W] N-Term(TMT6plex); K8(TMT6plex) 34 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q6A0E9; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; MKIAA0004 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0004 PE=4 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 2 2 0.4816 0 1 1 1 697.38251 1393.75774 1393.7575 0.17 0.00012 0/0 0 0 7353924.5 HCD 30 MS2 9.05191 406 110 45.5994 11799 11799 11791 QEplus033719.raw F4 461.6 301.6 458 409.6 398.9 406.3 371 3.53 1 FALSE 1.14E-05 5.71E-05 0.903 -250 45474 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTDQASMPDNTAAQK [R].nTDQASmPDNTAAQk.[V] N-Term(TMT6plex); M7(Oxidation); K15(TMT6plex) 7 Q69ZX3; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; A0A2R8VHF9; A0A338P6K2; O08638-2; O08638; Q8VDD5; E9QPE7 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2 0 3 3 0.7416 0 1 1 1 689.34485 2066.01999 2066.02245 -1.19 -0.00082 0/0 0 0 5173403.5 HCD 30 MS2 28.83835 367.6 110 45.6019 11800 11800 11791 QEplus033719.raw F4 381.4 319.1 423.8 293.5 431.9 355.7 163 4.49 2 FALSE 1.14E-05 5.65E-10 1.854 -250 45480 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGADESEEEGR [R].lGADESEEEGR.[S] N-Term(TMT6plex) 4 Q8BHG1 Nardilysin OS=Mus musculus OX=10090 GN=Nrdc PE=1 SV=1 Q8BHG1; Q8R320; A2A9Q2; A6PWC3 "Nardilysin OS=Mus musculus OX=10090 GN=Nrdc PE=1 SV=1; Nardilysin, N-arginine dibasic convertase, NRD convertase 1 OS=Mus musculus OX=10090 GN=Nrd1 PE=2 SV=1; Nardilysin, N-arginine dibasic convertase, NRD convertase 1 OS=Mus musculus OX=10090 GN=Nrd1 PE=1 SV=1; Nardilysin, N-arginine dibasic convertase, NRD convertase 1 OS=Mus musculus OX=10090 GN=Nrd1 PE=1 SV=1" 0 2 2 0.7341 0 1 1 1 710.84052 1420.67375 1420.67533 -1.11 -0.00079 0/0 0 0 4934613.5 HCD 30 MS2 35.80444 403.9 110 45.6045 11801 11801 11791 QEplus033719.raw F4 377.3 367.3 448 334.1 497.1 399.6 66 4.25 1 FALSE 1.14E-05 2.94E-09 1.718 -250 45487 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REEAAVDAQQQK [R].rEEAAVDAQQQk.[R] N-Term(TMT6plex); K12(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.67 0 1 1 1 916.00977 1831.01225 1831.0074 2.65 0.00243 0/0 0 0 3400295 HCD 30 MS2 12.96883 201.9 110 45.6143 11804 11804 11802 QEplus033719.raw F4 229.9 166.2 217.1 171.1 210.8 216 443 4.94 2 FALSE 1.14E-05 2.35E-09 1.737 -250 45501 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELHIQGNR [K].eLHIQGNR.[L] N-Term(TMT6plex) 6 Q01730 Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=3 Q9CUS2; Q01730; A2AUR7; Q3TFN7; Q9D031; Q9CSE4 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rsu1 PE=2 SV=1; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=3; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsu1 PE=2 SV=1; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rsu1 PE=2 SV=1 0 3 3 0.4676 0 1 1 1 399.22943 1195.67374 1195.67449 -0.62 -0.00025 0/0 0 0 27015752 HCD 30 MS2 8.472982 284.7 40.623 45.6188 11806 11806 11802 QEplus033719.raw F4 323.9 232.5 294.8 221.8 325.2 310.2 305 3.7 1 FALSE 4.43E-05 0.001703 0.614 -250 45505 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RIVAPPGGR [K].rIVAPPGGR.[S] N-Term(TMT6plex) 4 E9PWE8 Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 Q3TAS8; E9PWE8; Q62188; Q3TT92 Amidohydro-rel domain-containing protein OS=Mus musculus OX=10090 GN=Dpysl3 PE=2 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 1 2 2 0.2363 0 1 1 1 576.36432 1151.72136 1151.72104 0.28 0.00016 0/0 0 0 11569712 HCD 30 MS2 42.89517 580.8 110 45.6213 11807 11807 11802 QEplus033719.raw F4 666.8 453.9 585.6 421.5 737.4 619.5 97 1.82 1 FALSE 0.001514 0.02299 0.258 -250 45515 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAGGANYDAQSE [K].kAGGANYDAQSE.[-] N-Term(TMT6plex); K1(TMT6plex) 1 Q544F6 Cotl1 protein OS=Mus musculus OX=10090 GN=Cotl1 PE=1 SV=1 Q544F6 Cotl1 protein OS=Mus musculus OX=10090 GN=Cotl1 PE=1 SV=1 1 2 2 0.7708 0 1 1 1 834.93518 1668.86308 1668.85933 2.25 0.00188 0/0 0 0 7157005.5 HCD 30 MS2 0 292.7 110 45.6238 11808 11808 11802 QEplus033719.raw F4 279.2 325.7 304 188.7 420.9 237.8 227 2.53 1 FALSE 1.14E-05 0.0001573 0.819 -250 45528 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAADQMK [K].qAADQMk.[N] N-Term(TMT6plex); K7(TMT6plex) 6 P26043 Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3 Q3TS74; P26043; Q3TH46; Q3U111; A0A5F8MPB9; Q3UJJ8 ERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1 0 2 2 0.3333 0 1 1 1 625.35364 1249.7 1249.69748 2.02 0.00126 0/0 0 0 3708852.25 HCD 30 MS2 31.25532 548.4 110 45.6289 11810 11810 11802 QEplus033719.raw F4 771.5 441.3 630.9 424.7 517 504.9 397 2.82 1 FALSE 5.44E-05 0.002376 0.582 -250 45543 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSGPNSADSANDGFVR [K].hSGPNSADSANDGFVR.[L] N-Term(TMT6plex) 4 Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 J3QMT0; Q9Z2X1-2; J3QM80; Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=8; Isoform 2 of Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf; Heterogeneous nuclear ribonucleoprotein F (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 0 3 3 0.773 0 1 1 1 620.63263 1859.88333 1859.88337 -0.02 -0.00001 0/0 0 0 14892401 HCD 30 MS2 29.65525 539 110 45.6337 11812 11812 11802 QEplus033719.raw F4 589.8 517.8 600.7 414.2 643.8 467.6 78 5.77 1 FALSE 1.14E-05 1.26E-13 2.548 -250 45559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVGQAAIR [R].gVGQAAIR.[G] N-Term(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 2 2 0.4846 0 1 1 1 500.80911 1000.61095 1000.61009 0.85 0.00043 0/0 0 0 128908912 HCD 30 MS2 7.340763 662.8 10.647 45.6454 11816 11816 11813 QEplus033719.raw F4 713.9 495.9 732 574.5 692.9 767.8 132 2.6 1 FALSE 2.26E-05 0.001034 0.659 -250 45563 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELYTQR [R].eLYTQR.[K] N-Term(TMT6plex) 1 Q8K3C3 Protein LZIC OS=Mus musculus OX=10090 GN=Lzic PE=1 SV=1 Q8K3C3 Protein LZIC OS=Mus musculus OX=10090 GN=Lzic PE=1 SV=1 0 2 2 0.4871 0 1 1 1 519.79346 1038.57964 1038.57813 1.46 0.00076 0/0 0 0 23676458 HCD 30 MS2 16.13296 1033.9 76.352 45.6499 11818 11818 11813 QEplus033719.raw F4 1143.3 775.5 1170.1 1040.1 901 1173.7 139 2.32 1 FALSE 0.003182 0.06205 0.108 -250 45569 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEPQNLGGAAGR [K].sEPQNLGGAAGR.[S] N-Term(TMT6plex) 2 B2RPS1 "RAB5B, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab5b PE=1 SV=1" B2RPS1; Q0PD56 "RAB5B, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab5b PE=1 SV=1; Rab5B OS=Mus musculus OX=10090 GN=Rab5b PE=2 SV=1" 0 2 2 0.6907 0 1 1 1 693.37152 1385.73577 1385.73346 1.67 0.00115 0/0 0 0 14228109 HCD 30 MS2 18.54559 411.9 110 45.6525 11819 11819 11813 QEplus033719.raw F4 432.3 284.8 447.1 356.2 468 483.2 225 3.75 1 FALSE 1.14E-05 1.65E-09 1.766 -250 45586 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVEAEAAHGTVTR [K].tVEAEAAHGTVTR.[H] N-Term(TMT6plex) 5 O88844 Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2 Q3TJ51; Q0QER9; O88844; Q5HZJ8; Q8C338 Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; IDP (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1 0 3 3 0.654 0 1 1 1 524.28522 1570.8411 1570.83865 1.56 0.00082 0/0 0 0 8632835 HCD 30 MS2 52.07624 687.6 110 45.6575 11821 11821 11813 QEplus033719.raw F4 733.8 571.5 711.5 644.2 774 690.8 305 5.26 1 FALSE 1.14E-05 1.05E-12 2.373 -250 45608 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSPSPTSQR [R].lSPSPTSQR.[S] N-Term(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 0 2 2 0.3802 0 1 1 1 601.34094 1201.67461 1201.67382 0.66 0.0004 0/0 0 0 113286504 HCD 30 MS2 9.193158 495.5 11.7 45.6698 11825 11825 11824 QEplus033719.raw F4 462.7 479.4 604.3 374.6 597.9 454.1 289 2.63 1 FALSE 0.001028 0.01345 0.353 -250 45628 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEERAEVAESK [R].sEERAEVAESk.[C] N-Term(TMT6plex); K11(TMT6plex) 3 P58774 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1 Q9D1R6; P58774; Q61344 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1 1 3 3 0.5398 0 1 1 1 564.97742 1692.9177 1692.91685 0.5 0.00028 0/0 0 0 33339802 HCD 30 MS2 21.25921 1169 47.729 45.6766 11828 11828 11824 QEplus033719.raw F4 1382.3 480.9 1304.5 1393.2 673.1 1780 399 3.89 1 FALSE 1.14E-05 1.31E-07 1.405 -250 45634 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAGGANYDAQSE [K].kAGGANYDAQSE.[-] N-Term(TMT6plex); K1(TMT6plex) 1 Q544F6 Cotl1 protein OS=Mus musculus OX=10090 GN=Cotl1 PE=1 SV=1 Q544F6 Cotl1 protein OS=Mus musculus OX=10090 GN=Cotl1 PE=1 SV=1 1 3 3 0.7431 0 1 1 1 556.95746 1668.85782 1668.85933 -0.91 -0.0005 0/0 0 0 21811138 HCD 30 MS2 28.41093 752.9 67.864 45.6788 11829 11829 11824 QEplus033719.raw F4 723.5 766.9 815.7 477.9 1070.4 662.8 229 3.97 1 FALSE 1.14E-05 5.68E-06 1.094 -250 45648 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLETEHK [K].sLETEHk.[A] N-Term(TMT6plex); K7(TMT6plex) 5 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q99LY0; Q91YQ5; Q5RKP4; Q3U900; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 0 3 3 0.2607 0 1 1 1 434.58618 1301.74399 1301.74654 -1.96 -0.00085 0/0 0 0 9179132 HCD 30 MS2 26.83334 838.5 110 45.6836 11831 11831 11824 QEplus033719.raw F4 994.5 604 930.5 756.9 825.1 919.9 326 3.26 1 FALSE 5.44E-05 0.002647 0.571 -250 45655 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRDLEGAVSR [K].qRDLEGAVSR.[L] N-Term(TMT6plex) 3 Q3TUQ5 Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=1 Q3TUQ5; O35691; Q9CV89 Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=1; Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=4; Pinin (Fragment) OS=Mus musculus OX=10090 GN=Pnn PE=2 SV=1 1 3 3 0.4646 0 1 1 1 453.92294 1359.75428 1359.75419 0.06 0.00003 0/0 0 0 6899518.5 HCD 30 MS2 61.25676 762.7 110 45.6861 11832 11832 11824 QEplus033719.raw F4 817.1 684.5 916.1 566.4 810.1 782.2 380 3.81 1 FALSE 1.14E-05 0.0001169 0.844 -250 45666 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WTTEQQQR [K].wTTEQQQR.[F] N-Term(TMT6plex) 7 B0LAE4 ADP-ribosylation factor-like 6 interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Arl6ip1 PE=2 SV=1 B0LAE4; Q3TQE3; Q3UBA1; Q3TIC7; Q80ZW9; Q3THR3; Q8C1Y9 ADP-ribosylation factor-like 6 interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Arl6ip1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Arl6ip1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Arl6ip1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Arl6ip1 PE=2 SV=1; ADP-ribosylation factor-like 6 interacting protein 1 OS=Mus musculus OX=10090 GN=Arl6ip1 PE=2 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Arl6ip1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Arl6ip1 PE=2 SV=1 0 2 2 0.5287 0 1 1 1 653.33972 1305.67217 1305.67488 -2.08 -0.00136 0/0 0 0 6010148.5 HCD 30 MS2 17.03141 476.4 110 45.6911 11834 11834 11824 QEplus033719.raw F4 454.7 473.4 428.8 384.1 638 479.2 221 2.61 1 FALSE 1.14E-05 0.0005773 0.71 -250 45681 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQSELQSQVR [K].qQSELQSQVR.[Y] N-Term(TMT6plex) 9 Q543N3 LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 A2A6H0; A2A6G8; Q543N3; E9Q0N6; A2A6G7; A2A6G5; A2A6H1; A2A6G6; A2A6G9 LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=8; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 0 2 2 0.4652 0 1 1 1 716.39276 1431.77825 1431.77532 2.04 0.00146 0/0 0 0 31439148 HCD 30 MS2 2.703917 479.8 63.924 45.7007 11837 11837 11835 QEplus033719.raw F4 475.3 528.5 555.6 297.2 590.3 432.2 335 3.74 1 FALSE 1.14E-05 4.82E-07 1.298 -250 45691 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCVAIAADRR [K].ncVAIAADRR.[F] N-Term(TMT6plex); C2(Carbamidomethyl) 1 Q545G0 Proteasome subunit beta OS=Mus musculus OX=10090 GN=Psmb3 PE=1 SV=1 Q545G0 Proteasome subunit beta OS=Mus musculus OX=10090 GN=Psmb3 PE=1 SV=1 1 2 2 0.2472 0 1 1 1 687.88007 1374.75286 1374.74733 4.02 0.00276 0/0 0 0 9637074 HCD 30 MS2 8.105473 389.2 110 45.7032 11838 11838 11835 QEplus033719.raw F4 432.4 291.5 383.1 315.5 507.7 405.1 364 2.71 1 FALSE 1.14E-05 3.99E-05 0.933 -250 45702 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDDNSYDEK [K].sDDNSYDEk.[Y] N-Term(TMT6plex); K9(TMT6plex) 6 Q8C483 Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1 A2AFS1; Q3U8N1; Q8C483; P26638; Q3U6F6; A2AFS0 "Seryl-aminoacyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Sars PE=1 SV=8; Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=2 SV=1; Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1; Serine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Sars1 PE=1 SV=3; Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=2 SV=1; Seryl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1" 0 2 2 0.8254 0 1 1 1 765.87085 1530.73442 1530.7324 1.32 0.00101 0/0 0 0 7709133.5 HCD 30 MS2 0 579.6 110 45.7083 11840 11840 11835 QEplus033719.raw F4 681.8 473.2 594.2 547.7 673.2 507.6 61 4.01 1 FALSE 1.14E-05 5.17E-06 1.102 -250 45716 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KASQASQEY [K].kASQASQEY.[-] N-Term(TMT6plex); K1(TMT6plex) 1 P27661 Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 P27661 Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 1 2 2 0.6828 0 1 1 1 735.40289 1469.79851 1469.80003 -1.03 -0.00076 0/0 0 0 2981119.25 HCD 30 MS2 0 231 110 45.7133 11842 11842 11835 QEplus033719.raw F4 198.3 322.9 249.7 146.7 303.2 165.4 293 2.27 1 FALSE 0.0009259 0.01279 0.362 -250 45725 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CNESLYGR [K].cNESLYGR.[K] N-Term(TMT6plex); C1(Carbamidomethyl) 3 Q9R059 Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=2 D6RJ68; F2Z455; Q9R059 Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=1; Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=1; Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=2 0 2 2 0.6588 0 1 1 1 614.30341 1227.59953 1227.59894 0.49 0.0003 0/0 0 0 15988502 HCD 30 MS2 0 721 110 45.7183 11844 11844 11835 QEplus033719.raw F4 740.2 650 834.6 657.2 686.8 757.1 83 2.96 1 FALSE 0.0001707 0.00387 0.531 -250 45741 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEERAEVAESK [R].sEERAEVAESk.[C] N-Term(TMT6plex); K11(TMT6plex) 3 P58774 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1 Q9D1R6; P58774; Q61344 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1 1 2 2 0.5458 0 1 1 1 846.96265 1692.91802 1692.91685 0.69 0.00058 0/0 0 0 10450836 HCD 30 MS2 7.218359 300.6 110 45.7306 11848 11848 11846 QEplus033719.raw F4 336.1 113.5 331.9 389.4 160 472.9 409 2.95 1 FALSE 1.14E-05 5.41E-06 1.098 -250 45747 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQVSPER [R].vQVSPER.[T] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.4609 0 1 1 1 522.30682 1043.60637 1043.60467 1.63 0.00085 0/0 0 0 140055776 HCD 30 MS2 15.51415 601.9 9.641 45.7329 11849 11849 11846 QEplus033719.raw F4 520.3 543.3 809.1 617.4 474.3 647.1 309 2.43 2 FALSE 0.001778 0.0307 0.213 -250 45756 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLETVR [R].qLETVR.[E] N-Term(TMT6plex) 4 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q0V930; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.2114 0 1 1 1 487.79581 974.58434 974.58321 1.16 0.00056 0/0 0 0 105319344 HCD 30 MS2 26.72663 542.4 10.185 45.7352 11850 11850 11846 QEplus033719.raw F4 564.6 482.8 576.5 443.4 664.9 522.5 263 2.46 1 FALSE 0.003182 0.06214 0.108 -250 45765 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VADQDGDSMATR [R].vADQDGDSMATR.[E] N-Term(TMT6plex) 5 Q8BH97 Reticulocalbin-3 OS=Mus musculus OX=10090 GN=Rcn3 PE=1 SV=1 A0A1B0GS22; A0A1B0GSK5; A0A1B0GR19; A0A1B0GR86; Q8BH97 Reticulocalbin-3 (Fragment) OS=Mus musculus OX=10090 GN=Rcn3 PE=1 SV=1; Reticulocalbin-3 (Fragment) OS=Mus musculus OX=10090 GN=Rcn3 PE=1 SV=1; Reticulocalbin-3 (Fragment) OS=Mus musculus OX=10090 GN=Rcn3 PE=1 SV=1; Reticulocalbin-3 (Fragment) OS=Mus musculus OX=10090 GN=Rcn3 PE=1 SV=1; Reticulocalbin-3 OS=Mus musculus OX=10090 GN=Rcn3 PE=1 SV=1 0 2 2 0.7725 0 1 1 1 747.85669 1494.7061 1494.70559 0.34 0.00026 0/0 0 0 34159780 HCD 30 MS2 12.7044 549.2 64.572 45.7375 11851 11851 11846 QEplus033719.raw F4 552.2 497.2 595.3 449.5 628 572.7 59 3.78 1 FALSE 1.14E-05 7.07E-10 1.836 -250 45796 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCIMNSGASGSR [K].scIMNSGASGSR.[N] N-Term(TMT6plex); C2(Carbamidomethyl) 5 A0A140LHU0 Disintegrin and metalloproteinase domain-containing protein 9 OS=Mus musculus OX=10090 GN=Adam9 PE=1 SV=1 A0A140LHU0; E9Q638; Q3U1W3; Q61072; Q3UG15 Disintegrin and metalloproteinase domain-containing protein 9 OS=Mus musculus OX=10090 GN=Adam9 PE=1 SV=1; Disintegrin and metalloproteinase domain-containing protein 9 OS=Mus musculus OX=10090 GN=Adam9 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Adam9 PE=2 SV=1; Disintegrin and metalloproteinase domain-containing protein 9 OS=Mus musculus OX=10090 GN=Adam9 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Adam9 PE=2 SV=1 0 2 2 0.7883 0 1 1 1 728.34796 1455.68865 1455.68816 0.33 0.00024 0/0 0 0 3950953 HCD 30 MS2 0 166.8 110 45.747 11855 11855 11846 QEplus033719.raw F4 162.3 151 182.5 151.2 206.6 147.4 58 3.92 1 FALSE 1.14E-05 1.63E-10 1.957 -250 45813 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTNDSLMR [K].gTNDSLMR.[Q] N-Term(TMT6plex) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 2 2 0.572 0 1 1 1 561.79309 1122.57891 1122.57747 1.28 0.00072 0/0 0 0 51661464 HCD 30 MS2 11.11195 498.8 24.738 45.7568 11858 11858 11857 QEplus033719.raw F4 582.8 183.6 461.2 708 301.5 755.7 166 2.64 1 FALSE 1.14E-05 0.0004717 0.727 -250 45817 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASAAPAKDPPAR [K].aSAAPAkDPPAR.[T] N-Term(TMT6plex); K7(TMT6plex) 7 O08784 Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 H3BIX0; Q05BH6; F6R3V4; O08784; Q7TPZ2; Q6PFZ6; H3BL37 Treacle protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Tcof1 protein OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 1 3 3 0.4801 0 1 1 1 537.3208 1609.94785 1609.94261 3.25 0.00175 0/0 0 0 8017772 HCD 30 MS2 6.403744 764.2 110 45.7593 11859 11859 11857 QEplus033719.raw F4 825.7 757.8 800.8 569.4 828.4 803.1 333 2.77 1 FALSE 0.001429 0.02062 0.276 -250 45836 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYDSISR [K].eYDSISR.[L] N-Term(TMT6plex) 2 Q9DB05 Alpha-soluble NSF attachment protein OS=Mus musculus OX=10090 GN=Napa PE=1 SV=1 Q9CXX1; Q9DB05 Uncharacterized protein OS=Mus musculus OX=10090 GN=Napa PE=2 SV=1; Alpha-soluble NSF attachment protein OS=Mus musculus OX=10090 GN=Napa PE=1 SV=1 0 2 2 0.5708 0 1 1 1 549.78711 1098.56694 1098.56287 3.71 0.00204 0/0 0 0 16056101 HCD 30 MS2 20.75824 1093.6 110 45.7685 11863 11863 11857 QEplus033719.raw F4 1171.6 851.7 1247.5 896.4 1094.7 1299.8 74 2.4 1 FALSE 0.0007436 0.01059 0.395 -250 45844 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAFAEDSGR [R].eAFAEDSGR.[F] N-Term(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.722 0 1 1 1 605.79913 1210.59099 1210.59015 0.7 0.00042 0/0 0 0 13897673 HCD 30 MS2 23.84515 845.4 110 45.7733 11865 11865 11857 QEplus033719.raw F4 993.3 241.1 763.3 1324.8 345.5 1404.2 79 3.13 2 FALSE 1.14E-05 2.59E-05 0.969 -250 45848 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALQQQQQQQQQQK [K].aLQQQQQQQQQQk.[L] N-Term(TMT6plex); K13(TMT6plex) 4 G3UWR2 GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1 G3UWR2; Q6Y7W8-2; G3UYG6; Q6Y7W8 GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; Isoform 2 of GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2; GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=1; GRB10-interacting GYF protein 2 OS=Mus musculus OX=10090 GN=Gigyf2 PE=1 SV=2 0 3 3 0.759 0 1 1 1 690.72015 2070.14591 2070.14562 0.14 0.0001 0/0 0 0 8851844 HCD 30 MS2 20.92045 283.9 110 45.7758 11866 11866 11857 QEplus033719.raw F4 315.2 226.1 313 234.6 342.6 271.6 475 5.02 1 FALSE 1.14E-05 1.57E-10 1.96 -250 45860 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISAPQER [RK].iSAPQER.[L] N-Term(TMT6plex) 3 P61164; Q8R5C5 Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1;Beta-centractin OS=Mus musculus OX=10090 GN=Actr1b PE=1 SV=1 P61164; Q8R1B2; Q8R5C5 Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1; Actr1b protein (Fragment) OS=Mus musculus OX=10090 GN=Actr1b PE=2 SV=1; Beta-centractin OS=Mus musculus OX=10090 GN=Actr1b PE=1 SV=1 0 2 2 0.2829 0 1 1 1 515.29895 1029.59062 1029.58902 1.55 0.0008 0/0 0 0 88346216 HCD 30 MS2 5.436696 623.4 17.661 45.7856 11869 11869 11868 QEplus033719.raw F4 587 568.6 682.2 505.6 709.1 687.7 326 2.51 2 FALSE 0.001929 0.03306 0.202 -250 45868 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGLSMR [R].qGLSMR.[Q] N-Term(TMT6plex) 8 G3UWX9; P61957 Small ubiquitin-related modifier 3 OS=Mus musculus OX=10090 GN=Sumo3 PE=4 SV=1;Small ubiquitin-related modifier 2 OS=Mus musculus OX=10090 GN=Sumo2 PE=1 SV=1 Q9Z172-2; G3UWX9; G3UZA7; G3UZ60; Q9Z172; P61957; G3UWI9; D3YW94 "Isoform 2 of Small ubiquitin-related modifier 3 OS=Mus musculus OX=10090 GN=Sumo3; Small ubiquitin-related modifier 3 OS=Mus musculus OX=10090 GN=Sumo3 PE=4 SV=1; Small ubiquitin-related modifier OS=Mus musculus OX=10090 GN=Sumo3 PE=1 SV=1; Predicted gene, 49325 OS=Mus musculus OX=10090 GN=Gm49325 PE=4 SV=1; Small ubiquitin-related modifier 3 OS=Mus musculus OX=10090 GN=Sumo3 PE=1 SV=1; Small ubiquitin-related modifier 2 OS=Mus musculus OX=10090 GN=Sumo2 PE=1 SV=1; Small ubiquitin-related modifier 3 OS=Mus musculus OX=10090 GN=Sumo3 PE=4 SV=1; Small ubiquitin-related modifier 2 OS=Mus musculus OX=10090 GN=Sumo2 PE=4 SV=1" 0 2 2 0.3964 0 1 1 1 460.76285 920.51842 920.5185 -0.09 -0.00004 0/0 0 0 44000900 HCD 30 MS2 25.0692 766.8 28.511 45.7879 11870 11870 11868 QEplus033719.raw F4 744 650.1 814.5 662.3 880.8 849.4 136 2.22 2 FALSE 0.003182 0.0622 0.108 -250 45878 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRPEPEVK [K].gRPEPEVk.[W] N-Term(TMT6plex); K8(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.3952 0 1 1 1 457.27838 1369.82059 1369.82037 0.16 0.00007 0/0 0 0 37407104 HCD 30 MS2 31.90151 930.4 47.951 45.7902 11871 11871 11868 QEplus033719.raw F4 1052.1 362.3 717.7 1609.3 490.7 1350.5 269 2.91 2 FALSE 0.001624 0.02652 0.235 -250 45883 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STHQAAVVSK [R].sTHQAAVVSk.[I] N-Term(TMT6plex); K10(TMT6plex) 7 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; Q3UGC3; E9QA15; E9Q0M9; D3Z6I7; S4R1T7; E9QA16 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 0 3 3 0.7427 0 1 1 1 495.96548 1485.8819 1485.87895 1.99 0.00098 0/0 0 0 32136974 HCD 30 MS2 37.89229 651.2 47.973 45.7924 11872 11872 11868 QEplus033719.raw F4 758.7 465.3 505.7 566.6 1130.9 479.9 318 4.47 1 FALSE 1.14E-05 1.02E-06 1.236 -250 45888 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKEEEER [K].lkEEEER.[EQ] N-Term(TMT6plex); K2(TMT6plex) 3 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 Q8CB96-2; Q8CB96; Q05D44 Isoform 2 of Ras association domain-containing protein 4 OS=Mus musculus OX=10090 GN=Rassf4; Ras association domain-containing protein 4 OS=Mus musculus OX=10090 GN=Rassf4 PE=1 SV=1; Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 1 3 3 0.0847 0 1 1 2 464.2702 1390.79605 1390.79422 1.32 0.00061 0/0 0 0 20440978 HCD 30 MS2 24.36387 1072.6 75.65 45.7947 11873 11873 11868 QEplus033719.raw F4 1442.6 744.7 993.9 1030.4 1320.2 903.7 534 1.77 1 FALSE 0.003321 0.06431 0.103 -250 45908 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDGTETSTNLHQK [K].sDGTETSTNLHQk.[L] N-Term(TMT6plex); K13(TMT6plex) 3 Q3TCS0 Prolyl endopeptidase OS=Mus musculus OX=10090 GN=Prep PE=2 SV=1 Q3TCS0; Q8C6A3; Q9QUR6 Prolyl endopeptidase OS=Mus musculus OX=10090 GN=Prep PE=2 SV=1; Prolyl endopeptidase OS=Mus musculus OX=10090 GN=Prep PE=2 SV=1; Prolyl endopeptidase OS=Mus musculus OX=10090 GN=Prep PE=1 SV=1 0 3 3 0.7427 0 1 1 1 625.9989 1875.98215 1875.98124 0.49 0.0003 0/0 0 0 12667848 HCD 30 MS2 0 612 110 45.8017 11876 11876 11868 QEplus033719.raw F4 754 476 582.1 604.3 844.8 410.8 316 5.13 1 FALSE 1.14E-05 6.31E-16 3.193 -250 45917 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASQYNIR [R].aSQYNIR.[G] N-Term(TMT6plex) 4 Q8C878 NEDD8-activating enzyme E1 catalytic subunit OS=Mus musculus OX=10090 GN=Uba3 PE=1 SV=2 Q8C878; Q8C878-2; Q66JT6; Q3TL72 NEDD8-activating enzyme E1 catalytic subunit OS=Mus musculus OX=10090 GN=Uba3 PE=1 SV=2; Isoform 2 of NEDD8-activating enzyme E1 catalytic subunit OS=Mus musculus OX=10090 GN=Uba3; NEDD8-activating enzyme E1 catalytic subunit (Fragment) OS=Mus musculus OX=10090 GN=Uba3 PE=2 SV=1; NEDD8-activating enzyme E1 catalytic subunit OS=Mus musculus OX=10090 GN=Uba3 PE=1 SV=1 0 2 2 0.3917 0 1 1 1 540.80432 1080.60137 1080.59992 1.33 0.00072 0/0 0 0 12034824 HCD 30 MS2 46.72346 1108.8 98.973 45.804 11877 11877 11868 QEplus033719.raw F4 1182.6 841.7 1271.3 1170.2 886 1300.8 144 2.4 1 FALSE 0.0003113 0.006089 0.477 -250 45924 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTMQNLNDR [KR].vTmQNLNDR.[L] N-Term(TMT6plex); M3(Oxidation) 22 P13645 "SWISS-PROT:P13645 Tax_Id=9606 Gene_Symbol=KRT10 Keratin, type I cytoskeletal 10" Q9Z2K1; P13645; P02535-2; Q7Z3Y8; P02535-3; P02533; Q7Z3Y7; Q148H6; Q3ZAW8; Q7Z3Y9; B2RU72; Q8VCW2; A2A513; Q7Z3Z0; Q9EQD7; Q61414; A2A4G1; Q3ZAW8; Q9Z320; P02535-1; Q61781; P08779 "SWISS-PROT:Q9Z2K1 Tax_Id=10090 Gene_Symbol=Krt16 Keratin, type I cytoskeletal 16; SWISS-PROT:P13645 Tax_Id=9606 Gene_Symbol=KRT10 Keratin, type I cytoskeletal 10; Isoform 2 of Keratin, type I cytoskeletal 10 OS=Mus musculus OX=10090 GN=Krt10; SWISS-PROT:Q7Z3Y8 Tax_Id=9606 Gene_Symbol=KRT27 Keratin, type I cytoskeletal 27; Isoform 3 of Keratin, type I cytoskeletal 10 OS=Mus musculus OX=10090 GN=Krt10; SWISS-PROT:P02533 Tax_Id=9606 Gene_Symbol=KRT14 Keratin, type I cytoskeletal 14; SWISS-PROT:Q7Z3Y7 Tax_Id=9606 Gene_Symbol=KRT28 Keratin 25D; TREMBL:Q148H6 (Bos taurus) Hypothetical protein MGC139876; TREMBL:Q3ZAW8;Q9EQD6;Q9EQD7 Tax_Id=10090 Gene_Symbol=Krt16 Keratin intermediate filament 16a; SWISS-PROT:Q7Z3Y9 Tax_Id=9606 Gene_Symbol=KRT26 Keratin, type I cytoskeletal 26; Keratin 27 OS=Mus musculus OX=10090 GN=Krt27 PE=2 SV=1; Keratin, type I cytoskeletal 25 OS=Mus musculus OX=10090 GN=Krt25 PE=1 SV=1; Keratin, type I cytoskeletal 10 OS=Mus musculus OX=10090 GN=Krt10 PE=1 SV=1; SWISS-PROT:Q7Z3Z0 Tax_Id=9606 Gene_Symbol=KRT25 Keratin, type I cytoskeletal 25; Keratin intermediate filament 16b OS=Mus musculus OX=10090 GN=K16 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Mus musculus OX=10090 GN=Krt15 PE=1 SV=2; TREMBL:A2A4G1 Tax_Id=10090 Gene_Symbol=Krt15 Keratin complex 1, acidic, gene 15; Keratin 16 OS=Mus musculus OX=10090 GN=Krt16 PE=2 SV=1; Keratin, type I cytoskeletal 27 OS=Mus musculus OX=10090 GN=Krt27 PE=1 SV=1; SWISS-PROT:P02535-1 Tax_Id=10090 Gene_Symbol=Krt10 Isoform 1 of Keratin, type I cytoskeletal 10; Keratin, type I cytoskeletal 14 OS=Mus musculus OX=10090 GN=Krt14 PE=1 SV=2; SWISS-PROT:P08779 Tax_Id=9606 Gene_Symbol=KRT16 Keratin, type I cytoskeletal 16" 0 2 2 0.2963 0 1 1 1 668.34796 1335.68865 1335.68882 -0.13 -0.00008 0/0 0 0 5239373.5 HCD 30 MS2 23.64232 363.3 110 45.8065 11878 11878 11868 QEplus033719.raw F4 397.9 287.5 397.9 341.5 396.5 358.8 231 1.62 1 TRUE 0.0002518 0.005161 0.497 -250 45934 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQVSEDGTLR [K].sQVSEDGTLR.[S] N-Term(TMT6plex) 3 Q8C7D7 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hid1 PE=2 SV=1 Q8R1F6-2; Q8C7D7; Q8R1F6 Isoform 2 of Protein HID1 OS=Mus musculus OX=10090 GN=Hid1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hid1 PE=2 SV=1; Protein HID1 OS=Mus musculus OX=10090 GN=Hid1 PE=1 SV=1 0 2 2 0.6006 0 1 1 1 660.85529 1320.70329 1320.69567 5.77 0.00381 0/0 0 0 3001649.5 HCD 30 MS2 34.24445 461.1 110 45.8138 11880 11880 11879 QEplus033719.raw F4 517.2 395.7 514.4 372.2 510 457.1 312 3.53 1 FALSE 1.14E-05 4.13E-07 1.31 -250 45943 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQSELQSQVR [K].qQSELQSQVR.[Y] N-Term(TMT6plex) 9 Q543N3 LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 A2A6H0; A2A6G8; Q543N3; E9Q0N6; A2A6G7; A2A6G5; A2A6H1; A2A6G6; A2A6G9 LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=8; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 0 3 3 0.409 0 1 1 1 477.93076 1431.77771 1431.77532 1.67 0.0008 0/0 0 0 16088744 HCD 30 MS2 59.68028 619.8 88.512 45.8161 11881 11881 11879 QEplus033719.raw F4 632.3 569.2 594.1 453.4 831.7 638.1 345 4.01 1 FALSE 1.14E-05 4.67E-06 1.11 -250 45973 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGAAPTVAK [R].hGAAPTVAk.[IT] N-Term(TMT6plex); K9(TMT6plex) 4 A0A1B0GSU0 Aldehyde dehydrogenase family 16 member A1 OS=Mus musculus OX=10090 GN=Aldh16a1 PE=1 SV=1 A0A1B0GSU0; A0A1B0GSN3; Q571I9; D3Z0B9 Aldehyde dehydrogenase family 16 member A1 OS=Mus musculus OX=10090 GN=Aldh16a1 PE=1 SV=1; Aldehyde dehydrogenase family 16 member A1 (Fragment) OS=Mus musculus OX=10090 GN=Aldh16a1 PE=1 SV=1; Aldehyde dehydrogenase family 16 member A1 OS=Mus musculus OX=10090 GN=Aldh16a1 PE=1 SV=2; Aldehyde dehydrogenase family 16 member A1 OS=Mus musculus OX=10090 GN=Aldh16a1 PE=1 SV=3 0 3 3 0.5793 0 1 1 1 437.27155 1309.80008 1309.79924 0.64 0.00028 0/0 0 0 13816441 HCD 30 MS2 34.0495 801.3 110 45.8254 11885 11885 11879 QEplus033719.raw F4 1044.5 504.7 754.1 743.8 871.2 889.2 235 3.28 1 FALSE 0.0001813 0.003984 0.528 -250 45981 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTPSQSPVVGR [K].gTPSQSPVVGR.[S] N-Term(TMT6plex) 8 A0A087WNV1 Arf-GAP domain and FG repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Agfg1 PE=1 SV=1 A0A087WNV1; A0A087WSR7; Q8K2K6; Q8K2K6-3; A0A087WRL1; Q8K2K6-1; Q8K2K6-2; A0A087WR52 Arf-GAP domain and FG repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Agfg1 PE=1 SV=1; Arf-GAP domain and FG repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Agfg1 PE=1 SV=1; Arf-GAP domain and FG repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Agfg1 PE=1 SV=2; Isoform 3 of Arf-GAP domain and FG repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Agfg1; Arf-GAP domain and FG repeat-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Agfg1 PE=1 SV=6; Isoform 1 of Arf-GAP domain and FG repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Agfg1; Isoform 2 of Arf-GAP domain and FG repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Agfg1; Arf-GAP domain and FG repeat-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Agfg1 PE=1 SV=1 0 2 2 0.5387 0 1 1 1 657.37323 1313.73918 1313.73748 1.3 0.00085 0/0 0 0 6743275 HCD 30 MS2 0 354.3 110 45.8279 11886 11886 11879 QEplus033719.raw F4 356.4 365.9 383.8 229 491.9 299.1 302 3.23 1 FALSE 1.14E-05 1.43E-07 1.398 -250 46000 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDGNEEDKENQGDETQGQQPPQR [R].eDGNEEDkENQGDETQGQQPPQR.[R] N-Term(TMT6plex); K8(TMT6plex) 6 Q810K5 Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 A2BGG7; Q810K5; Q8BRJ5; P62960; Q71V06; Q60951 Y-box-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=1; Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Y-box-binding protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=3; Y box transcription factor (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1b OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 1 4 4 0.7739 0 1 1 1 772.36353 3086.43227 3086.42991 0.76 0.00059 0/0 0 0 11442571 HCD 30 MS2 2.4759 104.4 110 45.8349 11889 11889 11879 QEplus033719.raw F4 106.1 89.9 113.5 86.3 111.4 118.9 105 8.36 1 FALSE 1.14E-05 6.31E-16 3.65 -250 46007 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGHPPAVK [K].aGHPPAVk.[A] N-Term(TMT6plex); K8(TMT6plex) 1 Q91XC8 Death-associated protein 1 OS=Mus musculus OX=10090 GN=Dap PE=1 SV=3 Q91XC8 Death-associated protein 1 OS=Mus musculus OX=10090 GN=Dap PE=1 SV=3 0 3 3 0.6667 0 1 1 1 412.26105 1234.76859 1234.76721 1.11 0.00046 0/0 0 0 132460048 HCD 30 MS2 25.75915 458.3 9.655 45.8422 11891 11891 11890 QEplus033719.raw F4 483.8 387.5 489.3 409.7 595.5 383.8 216 3.36 1 FALSE 1.14E-05 0.000762 0.686 -250 46016 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQVAGDSHVK [K].dQVAGDSHVk.[G] N-Term(TMT6plex); K10(TMT6plex) 2 A0A2X0SYS9 ARHGAP18 (Fragment) OS=Mus musculus OX=10090 GN=ARHGAP18 PE=4 SV=1 A0A2X0SYS9; Q8K0Q5 ARHGAP18 (Fragment) OS=Mus musculus OX=10090 GN=ARHGAP18 PE=4 SV=1; Rho GTPase-activating protein 18 OS=Mus musculus OX=10090 GN=Arhgap18 PE=1 SV=1 0 3 3 0.4304 0 1 1 1 505.28552 1513.84201 1513.83748 3 0.00151 0/0 0 0 6919663 HCD 30 MS2 71.79789 824.6 110 45.8447 11892 11892 11890 QEplus033719.raw F4 838.3 706.3 858 672.6 1026.2 846.1 393 3.16 1 FALSE 1.14E-05 0.000701 0.693 -250 46028 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAEVLGHK [K].rAEVLGHk.[T] N-Term(TMT6plex); K8(TMT6plex) 3 Q80UG5 Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 Q80UG5-3; Q80UG5; A2A6U3 Isoform 3 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 1 3 3 0.4858 0 1 1 1 456.62277 1367.85376 1367.85234 1.04 0.00047 0/0 0 0 35086768 HCD 30 MS2 45.82621 766.3 45.179 45.8492 11894 11894 11890 QEplus033719.raw F4 798.4 511.5 755.5 896.1 808.2 827.8 186 4.24 1 FALSE 1.14E-05 2.89E-07 1.34 -250 46033 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QMIGER [K].qMIGER.[L] N-Term(TMT6plex) 2 A2A5N3; B2RXY9 Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1l PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1l PE=2 SV=1 0 2 2 0.2601 0 1 1 1 481.76898 962.53069 962.52907 1.68 0.00081 0/0 0 0 35013852 HCD 30 MS2 38.84836 860.5 30.505 45.8515 11895 11895 11890 QEplus033719.raw F4 869.9 744.2 969.9 666.5 1005.2 907.5 251 2.23 1 FALSE 0.002326 0.04631 0.153 -250 46034 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QMLGER [K].qMLGER.[L] N-Term(TMT6plex) 15 P29341; Q99LF8 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2;Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1 P29341; Q3U8U8; Q99LF8; Q3TUS5; Q91YZ8; A3KFU5; Q62029; Q792Y0; F6ZAX1; Q3UX16; Q8BN32; Q3TSA5; A3KFU8; Q6PHQ9; Q99KL3 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; PABC domain-containing protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc2 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 PE=3 SV=1; Polyadenylate-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; PABC domain-containing protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1 0 2 2 0.2601 0 1 2 2 481.76898 962.53069 962.52907 1.68 0.00081 0/0 0 0 35013852 HCD 30 MS2 38.84836 860.5 30.505 45.8515 11895 11895 11890 QEplus033719.raw F4 869.9 744.2 969.9 666.5 1005.2 907.5 251 2.23 2 FALSE 0.002326 0.04631 0.153 -250 46067 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVEAEAAHGTVTR [K].tVEAEAAHGTVTR.[H] N-Term(TMT6plex) 5 O88844 Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2 Q3TJ51; Q0QER9; O88844; Q5HZJ8; Q8C338 Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; IDP (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1 0 2 2 0.6549 0 1 1 1 785.92548 1570.84368 1570.83865 3.2 0.00251 0/0 0 0 1381495.5 HCD 30 MS2 0 81.4 110 45.8613 11899 11899 11890 QEplus033719.raw F4 81.8 78.7 77.2 76 109.2 65.8 321 3.68 1 FALSE 1.14E-05 2.97E-09 1.717 -250 46081 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RIVAPPGGR [K].rIVAPPGGR.[S] N-Term(TMT6plex) 4 E9PWE8 Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 Q3TAS8; E9PWE8; Q62188; Q3TT92 Amidohydro-rel domain-containing protein OS=Mus musculus OX=10090 GN=Dpysl3 PE=2 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 1 3 3 0.4881 0 1 1 1 384.57919 1151.72303 1151.72104 1.72 0.00066 0/0 0 0 173864960 HCD 30 MS2 5.148505 175.9 6.882 45.8711 11902 11902 11901 QEplus033719.raw F4 169.4 140.2 187 135.8 259.4 163.8 97 3.77 1 FALSE 1.14E-05 1.32E-06 1.214 -250 46091 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDGNEEDKENQGDETQGQQPPQR [R].eDGNEEDkENQGDETQGQQPPQR.[R] N-Term(TMT6plex); K8(TMT6plex) 6 Q810K5 Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 A2BGG7; Q810K5; Q8BRJ5; P62960; Q71V06; Q60951 Y-box-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=1; Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Y-box-binding protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=3; Y box transcription factor (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1b OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 1 3 3 0.7754 0 1 1 1 1029.48352 3086.43601 3086.42991 1.98 0.00203 0/0 0 0 6496552 HCD 30 MS2 0 151.1 110 45.8736 11903 11903 11901 QEplus033719.raw F4 146.2 129 181 116.7 160.6 173.1 119 6.1 1 FALSE 1.14E-05 6.31E-16 3.41 -250 46095 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DHTNAQFK [R].dHTNAQFk.[S] N-Term(TMT6plex); K8(TMT6plex) 1 Q9DCT2 "NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs3 PE=1 SV=2" Q9DCT2 "NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs3 PE=1 SV=2" 0 3 3 0.6172 0 1 1 1 473.59845 1418.7808 1418.77923 1.1 0.00052 0/0 0 0 69822968 HCD 30 MS2 17.28568 542.1 19.603 45.8759 11904 11904 11901 QEplus033719.raw F4 589.6 386.6 545.1 617.9 529.3 584 356 4.65 1 FALSE 1.14E-05 1.66E-05 1.006 -250 46101 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TCFSPNR [K].tcFSPNR.[V] N-Term(TMT6plex); C2(Carbamidomethyl) 6 Q6IRT4 Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=2 SV=1 Q8VH52; Q6IRT4; Q9DCH4; Q8BTW2; Q3U8X1; Q3UVY8 Translation initiation factor-3 subunit 5 (Fragment) OS=Mus musculus OX=10090 GN=Eif3f PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=1 SV=2; Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=2 SV=1 0 2 2 0.5777 0 1 1 1 555.78265 1110.55803 1110.55634 1.52 0.00084 0/0 0 0 55695788 HCD 30 MS2 7.659786 696.9 27.591 45.8781 11905 11905 11901 QEplus033719.raw F4 706.1 583.5 814.2 566.9 748.6 762.1 113 2.51 1 FALSE 0.001125 0.01492 0.334 -250 46122 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQEDEVK [R].aQEDEVk.[R] N-Term(TMT6plex); K7(TMT6plex) 3 Q8BRF7 Sec1 family domain-containing protein 1 OS=Mus musculus OX=10090 GN=Scfd1 PE=1 SV=1 Q8BRF7-3; Q8BRF7; Q8BRF7-2 Isoform 3 of Sec1 family domain-containing protein 1 OS=Mus musculus OX=10090 GN=Scfd1; Sec1 family domain-containing protein 1 OS=Mus musculus OX=10090 GN=Scfd1 PE=1 SV=1; Isoform 2 of Sec1 family domain-containing protein 1 OS=Mus musculus OX=10090 GN=Scfd1 0 2 2 0.2416 0 1 1 1 638.86218 1276.71709 1276.7149 1.71 0.00109 0/0 0 0 7362425.5 HCD 30 MS2 0 613.9 110 45.8874 11909 11909 11901 QEplus033719.raw F4 711.3 508 675.8 546.9 655.5 585.9 383 2.69 1 FALSE 0.0003996 0.007242 0.453 -250 46139 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEQYDQAK [R].gEQYDQAk.[L] N-Term(TMT6plex); K8(TMT6plex) 8 Q6ZQ08 CCR4-NOT transcription complex subunit 1 OS=Mus musculus OX=10090 GN=Cnot1 PE=1 SV=2 A0A1D5RML9; Q6ZQ08-2; Q6ZQ08-4; Q6ZQ08; B7ZWL1; A0A1D5RMJ8; B2RXR3; A0A1D5RMD8 CCR4-NOT transcription complex subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Cnot1 PE=1 SV=1; Isoform 2 of CCR4-NOT transcription complex subunit 1 OS=Mus musculus OX=10090 GN=Cnot1; Isoform 4 of CCR4-NOT transcription complex subunit 1 OS=Mus musculus OX=10090 GN=Cnot1; CCR4-NOT transcription complex subunit 1 OS=Mus musculus OX=10090 GN=Cnot1 PE=1 SV=2; CCR4-NOT transcription complex subunit 1 OS=Mus musculus OX=10090 GN=Cnot1 PE=1 SV=1; CCR4-NOT transcription complex subunit 1 OS=Mus musculus OX=10090 GN=Cnot1 PE=1 SV=1; Cnot1 protein OS=Mus musculus OX=10090 GN=Cnot1 PE=2 SV=1; CCR4-NOT transcription complex subunit 1 OS=Mus musculus OX=10090 GN=Cnot1 PE=1 SV=1 0 2 2 0.4867 0 1 1 1 698.87909 1396.7509 1396.74727 2.6 0.00182 0/0 0 0 3308828 HCD 30 MS2 0 232.8 110 45.8924 11911 11911 11901 QEplus033719.raw F4 227.9 196.3 241.6 207 286.3 237.8 310 3.39 1 FALSE 1.14E-05 0.0004402 0.733 -250 46169 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVDHCPIK [K].rVDHcPIk.[S] N-Term(TMT6plex); C5(Carbamidomethyl); K8(TMT6plex) 2 P45878 Peptidyl-prolyl cis-trans isomerase FKBP2 OS=Mus musculus OX=10090 GN=Fkbp2 PE=1 SV=1 P45878; Q3UND3 Peptidyl-prolyl cis-trans isomerase FKBP2 OS=Mus musculus OX=10090 GN=Fkbp2 PE=1 SV=1; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp2 PE=2 SV=1 1 4 4 0.5192 0 1 1 1 371.47144 1482.86391 1482.86152 1.61 0.0006 0/0 0 0 38437636 HCD 30 MS2 19.68908 361.9 25.666 45.909 11917 11917 11912 QEplus033719.raw F4 457.7 287.5 373.6 271.2 424.3 356.8 342 2.87 1 FALSE 0.004038 0.07469 0.075 -250 46175 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NFNAGGHK [K].nFNAGGHk.[V] N-Term(TMT6plex); K8(TMT6plex) 5 J3QMG3; Q3UFA8 Voltage-dependent anion-selective channel protein 3 OS=Mus musculus OX=10090 GN=Vdac3 PE=1 SV=1;Voltage-dependent anion-selective channel protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Vdac3 PE=2 SV=1 J3QMG3; Q3UFA8; Q3TTN3; Q5EBQ0; Q60931 Voltage-dependent anion-selective channel protein 3 OS=Mus musculus OX=10090 GN=Vdac3 PE=1 SV=1; Voltage-dependent anion-selective channel protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Vdac3 PE=2 SV=1; Voltage-dependent anion-selective channel protein 3 OS=Mus musculus OX=10090 GN=Vdac3 PE=2 SV=1; Voltage-dependent anion-selective channel protein 3 OS=Mus musculus OX=10090 GN=Vdac3 PE=2 SV=1; Voltage-dependent anion-selective channel protein 3 OS=Mus musculus OX=10090 GN=Vdac3 PE=1 SV=1 0 3 3 0.6194 0 1 1 1 434.9158 1302.73285 1302.73189 0.74 0.00032 0/0 0 0 23559984 HCD 30 MS2 56.6446 668.2 21.654 45.9112 11918 11918 11912 QEplus033719.raw F4 772.9 477.9 736.4 783.5 637.8 600.8 373 3.81 2 FALSE 1.14E-05 2.59E-07 1.349 -250 46185 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANGMELDGRR [R].aNGMELDGRR.[I] N-Term(TMT6plex) 7 E9QP00; F8WJG3 Transformer-2 protein homolog alpha OS=Mus musculus OX=10090 GN=Tra2a PE=1 SV=1;Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1 E9QP00; F8WJG3; Q6PFR5; A0A0N4SVC2; Q3TAP5; Q5PR75; P62996 Transformer-2 protein homolog alpha OS=Mus musculus OX=10090 GN=Tra2a PE=1 SV=1; Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1; Transformer-2 protein homolog alpha OS=Mus musculus OX=10090 GN=Tra2a PE=1 SV=1; Transformer-2 protein homolog alpha OS=Mus musculus OX=10090 GN=Tra2a PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Tra2a PE=2 SV=1; Sfrs10 protein OS=Mus musculus OX=10090 GN=Tra2b PE=2 SV=1; Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1 1 3 3 0.5503 0 1 1 1 449.90533 1347.70145 1347.70005 1.04 0.00047 0/0 0 0 15371416 HCD 30 MS2 43.67677 869 82.713 45.9158 11920 11920 11912 QEplus033719.raw F4 839.9 797.8 926.8 682.4 1023.1 943.7 256 3.98 2 FALSE 1.14E-05 2.78E-07 1.343 -250 46200 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNSAVTTEPAAK [K].rNSAVTTEPAAk.[V] N-Term(TMT6plex); K12(TMT6plex) 2 A0A0G2JFH2 Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 A0A0G2JFH2; Q60638 Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=2 SV=1 1 3 3 0.6487 0 1 1 1 568.33398 1702.9874 1702.9852 1.29 0.00073 0/0 0 0 4364344.5 HCD 30 MS2 46.69522 661.2 110 45.9207 11922 11922 11912 QEplus033719.raw F4 774.5 307.8 667.7 750.9 406.1 1060.2 428 5.01 1 FALSE 1.14E-05 1.39E-10 1.97 -250 46207 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DHTNAQFK [R].dHTNAQFk.[S] N-Term(TMT6plex); K8(TMT6plex) 1 Q9DCT2 "NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs3 PE=1 SV=2" Q9DCT2 "NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs3 PE=1 SV=2" 0 2 2 0.6835 0 1 1 1 709.89496 1418.78264 1418.77923 2.4 0.0017 0/0 0 0 4098361.25 HCD 30 MS2 17.7173 323.6 110 45.928 11924 11924 11923 QEplus033719.raw F4 348.7 221.9 305.3 364.1 339.9 361.7 354 3.16 1 FALSE 1.14E-05 4.84E-05 0.917 -250 46225 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVAEADSVR [R].eVAEADSVR.[Q] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5791 0 1 1 1 602.82281 1204.63835 1204.6371 1.04 0.00063 0/0 0 0 57742276 HCD 30 MS2 33.66049 600.2 19.448 45.9325 11926 11926 11923 QEplus033719.raw F4 678.8 532.9 654.5 502.5 602 630.6 256 3.16 2 FALSE 1.14E-05 2.67E-05 0.966 -250 46231 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIPQAER [R].eIPQAER.[Y] N-Term(TMT6plex) 21 P30999 Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2 D3Z2H7; P30999-2; E9Q906; Q3TPD1; E9Q905; D3Z2H2; P30999; E9Q8Z9; Q3UF77; G3X9V2; E9Q903; E9Q986; E9Q8Z8; E9Q901; E9Q8Z6; P30999-3; E9Q904; E9Q8Z5; E9Q8Z4; D3Z7H6; E9Q907 Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Isoform 2 of Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Isoform 3 of Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1 0 2 2 0.3231 0 1 1 1 536.30426 1071.60124 1071.59959 1.54 0.00083 0/0 0 0 56303808 HCD 30 MS2 13.72006 673.7 26.257 45.9348 11927 11927 11923 QEplus033719.raw F4 703.3 684.4 705.8 459.8 882.6 606.2 161 2.29 1 FALSE 0.001736 0.02923 0.22 -250 46245 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLQSIGTENTEENRR [K].rLQSIGTENTEENRR.[F] N-Term(TMT6plex) 9 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 A0A0U1RPT5; D3YWI1; A0A0U1RPN8; A6ZI47; D3YV98; D3Z510; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart2 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=2; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 2 4 4 0.692 0 1 1 1 508.77274 2032.06911 2032.07329 -2.06 -0.00105 0/0 0 0 19043644 HCD 30 MS2 5.532125 428.4 56.441 45.9416 11930 11930 11923 QEplus033719.raw F4 541 235.6 435.9 469.7 271.8 616.3 352 4.61 1 FALSE 1.14E-05 2.28E-11 2.119 -250 46260 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NATVEMTR [R].nATVEMTR.[R] N-Term(TMT6plex) 3 E9Q3M0 Mothers against decapentaplegic homolog OS=Mus musculus OX=10090 GN=Smad2 PE=1 SV=1 Q62432-2; E9Q3M0; Q62432 Isoform Short of Mothers against decapentaplegic homolog 2 OS=Mus musculus OX=10090 GN=Smad2; Mothers against decapentaplegic homolog OS=Mus musculus OX=10090 GN=Smad2 PE=1 SV=1; Mothers against decapentaplegic homolog 2 OS=Mus musculus OX=10090 GN=Smad2 PE=1 SV=2 0 2 2 0.4525 0 1 1 1 575.80835 1150.60942 1150.60877 0.56 0.00032 0/0 0 0 7448827 HCD 30 MS2 48.13443 640.2 110 45.9463 11932 11932 11923 QEplus033719.raw F4 635.1 527.3 696.6 503.5 750.8 727.9 231 1.79 1 FALSE 9.73E-05 0.002942 0.56 -250 46269 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TASTIQEPAR [K].tASTIQEPAR.[L] N-Term(TMT6plex) 1 B2RS43 "DNA segment, Chr 17, human D6S53E OS=Mus musculus OX=10090 GN=D17H6S53E PE=1 SV=1" B2RS43 "DNA segment, Chr 17, human D6S53E OS=Mus musculus OX=10090 GN=D17H6S53E PE=1 SV=1" 0 2 2 0.0464 2 2 2 651.87061 1302.73393 1302.7215 9.55 0.00622 0/0 0 0 5097473 HCD 30 MS2 48.1666 597.4 110 45.9488 11933 11933 11923 QEplus033719.raw F4 688.6 442.6 647.2 629.7 580.7 595.7 380 2.67 1 FALSE 1.14E-05 0.0001147 0.846 -250 46280 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMESRDEEVEEAR [K].eMESRDEEVEEAR.[Q] N-Term(TMT6plex) 14 A0A4Y5WWJ7 Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1 E9Q405; Q6PER1; Q9JMH9-6; A0A1C7ZN10; E9QAX2; Q9JMH9-5; Q9JMH9-1; B2RRE2; A0A4Y5WWJ7; Q9JMH9-2; K3W4L0; Q9JMH9-7; Q9JMH9; E9QA74 Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Myo18a protein (Fragment) OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1; Isoform 6 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 5 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Isoform 1 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Myo18a protein OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1; Isoform 2 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 7 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=2; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1 1 3 3 0.7429 0 1 1 1 613.28583 1837.84293 1837.84354 -0.33 -0.0002 0/0 0 0 5298376.5 HCD 30 MS2 19.62186 333.1 110 45.9587 11936 11936 11934 QEplus033719.raw F4 369 236.9 407.5 324.7 278.9 381.9 42 4.59 1 FALSE 1.14E-05 4.79E-06 1.108 -250 46284 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNQIGTVNDR [R].tNQIGTVNDR.[L] N-Term(TMT6plex) 2 Q9CX00 IST1 homolog OS=Mus musculus OX=10090 GN=Ist1 PE=1 SV=1 Q9CX00; Q8BHC2 IST1 homolog OS=Mus musculus OX=10090 GN=Ist1 PE=1 SV=1; IST1 homolog OS=Mus musculus OX=10090 GN=Ist1 PE=2 SV=1 0 2 2 0.547 0 1 1 1 673.86572 1346.72417 1346.72256 1.2 0.00081 0/0 0 0 20158458 HCD 30 MS2 8.232852 590.6 110 45.9612 11937 11937 11934 QEplus033719.raw F4 600.2 533.3 640.5 472.9 675.7 620.7 276 4.15 1 FALSE 1.14E-05 2.52E-07 1.351 -250 46292 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELPSAGSR [R].eLPSAGSR.[D] N-Term(TMT6plex) 7 E9PUD2 Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1 E9PUD2; Q8K1M6-3; A0A2U3TZ67; Q8K1M6-4; Q8K1M6; Q8K1M6-2; Q3U4P3 Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1; Isoform 3 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1; Isoform 4 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=2; Isoform 2 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein (Fragment) OS=Mus musculus OX=10090 GN=Dnm1l PE=2 SV=1 0 2 2 0.374 0 1 1 1 523.29565 1045.58403 1045.58394 0.09 0.00005 0/0 0 0 17561294 HCD 30 MS2 28.6643 1071.9 84.905 45.9634 11938 11938 11934 QEplus033719.raw F4 1190.7 846.2 1183.5 948.8 1045.6 1216.9 223 2.46 1 FALSE 0.001028 0.01357 0.351 -250 46306 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KASQASQEY [K].kASQASQEY.[-] N-Term(TMT6plex); K1(TMT6plex) 1 P27661 Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 P27661 Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 1 3 3 0.6565 0 1 1 1 490.60519 1469.80103 1469.80003 0.68 0.00033 0/0 0 0 12210735 HCD 30 MS2 39.60167 840.5 110 45.9682 11940 11940 11934 QEplus033719.raw F4 921.1 776.5 879.9 668.8 887.7 909 287 3.61 1 FALSE 5.44E-05 0.002601 0.573 -250 46316 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHAGPK [K].iHAGPk.[F] N-Term(TMT6plex); K6(TMT6plex) 4 Q3TWN8 Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1 Q3TWN8; Q9Z110; Q9Z110-2; Q3UGW8 Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1; Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=1 SV=2; Isoform Short of Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1; Gamma-glutamyl kinase (Fragment) OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1 0 3 3 0.4205 0 1 1 1 360.90262 1080.6933 1080.69299 0.29 0.00011 0/0 0 0 10527588 HCD 30 MS2 51.80534 650.8 79.528 45.9704 11941 11941 11934 QEplus033719.raw F4 893.7 395.3 744 582.9 551 737.8 23 3.02 1 FALSE 0.001248 0.01684 0.311 -250 46326 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVQEAEK [R].mVQEAEk.[Y] N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex) 16 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 0 2 2 0.425 0 1 1 1 654.86658 1308.72588 1308.72336 1.92 0.00126 0/0 0 0 7004217 HCD 30 MS2 50.99239 508.8 110 45.9729 11942 11942 11934 QEplus033719.raw F4 551.3 347.5 575.5 422.9 617.7 537.8 385 2.4 1 FALSE 0.0003803 0.006977 0.458 -250 46333 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGGSLPPQAR [K].eGGSLPPQAR.[S] N-Term(TMT6plex) 3 E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.4841 0 1 1 1 620.84644 1240.68559 1240.68472 0.71 0.00044 0/0 0 0 7251825.5 HCD 30 MS2 9.613882 483.7 110 45.9755 11943 11943 11934 QEplus033719.raw F4 485.5 393.7 599.8 478.4 409.5 535.5 261 2.52 1 FALSE 1.14E-05 9.76E-05 0.859 -250 46342 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEGGSGGDSEVQR [R].lEGGSGGDSEVQR.[T] N-Term(TMT6plex) 4 A0A1S6GWH1 AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc5 PE=2 SV=1 A0A1S6GWH1; Q8K1K2; Q99KR1; P62196 AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc5 PE=2 SV=1; 26S proteasome regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmc5 PE=1 SV=1; Psmc5 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc5 PE=2 SV=1; 26S proteasome regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmc5 PE=1 SV=1 0 2 2 0.5714 0 1 1 1 760.3819 1519.75652 1519.75498 1.01 0.00077 0/0 0 0 4772802.5 HCD 30 MS2 11.43685 261.4 110 45.978 11944 11944 11934 QEplus033719.raw F4 274.5 218.4 293.4 223.8 243.7 314.4 146 3.78 1 FALSE 1.14E-05 1.31E-11 2.165 -250 46349 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YGQGGNCAEGK [K].yGQGGNcAEGk.[E] N-Term(TMT6plex); C7(Carbamidomethyl); K11(TMT6plex) 3 Q3TMH2 Secernin-3 OS=Mus musculus OX=10090 GN=Scrn3 PE=1 SV=1 A2AWQ9; Q3TMH2; Q6P6J8 Secernin-3 OS=Mus musculus OX=10090 GN=Scrn3 PE=1 SV=1; Secernin-3 OS=Mus musculus OX=10090 GN=Scrn3 PE=1 SV=1; Scrn3 protein (Fragment) OS=Mus musculus OX=10090 GN=Scrn3 PE=2 SV=1 0 2 2 0.6696 0 1 1 1 799.90356 1598.79985 1598.79971 0.09 0.00007 0/0 0 0 2770087 HCD 30 MS2 0 188.2 110 45.9853 11946 11946 11945 QEplus033719.raw F4 200.4 150.1 180.6 218.6 175.4 204.3 159 3.36 1 FALSE 1.14E-05 1.33E-08 1.594 -250 46356 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSQGAAEEDHGCRK [R].lSQGAAEEDHGcRk.[G] N-Term(TMT6plex); C12(Carbamidomethyl); K14(TMT6plex) 3 Q14AX9 "Mannose receptor, C type 2 OS=Mus musculus OX=10090 GN=Mrc2 PE=2 SV=1" A2AAA9; Q14AX9; Q64449 "C-type mannose receptor 2 OS=Mus musculus OX=10090 GN=Mrc2 PE=1 SV=1; Mannose receptor, C type 2 OS=Mus musculus OX=10090 GN=Mrc2 PE=2 SV=1; C-type mannose receptor 2 OS=Mus musculus OX=10090 GN=Mrc2 PE=1 SV=3" 1 4 4 0.6787 0 1 1 1 504.76398 2016.03408 2016.03329 0.39 0.0002 0/0 0 0 25309252 HCD 30 MS2 45.03191 458.5 31.092 45.9876 11947 11947 11945 QEplus033719.raw F4 456.4 362.8 512.8 432.7 494.9 491.2 266 4.42 1 FALSE 1.14E-05 1.41E-09 1.779 -250 46379 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIDEHANEDVER [R].nIDEHANEDVER.[M] N-Term(TMT6plex) 1 Q4FJL0 Rab10 OS=Mus musculus OX=10090 GN=Rab10 PE=1 SV=1 Q4FJL0 Rab10 OS=Mus musculus OX=10090 GN=Rab10 PE=1 SV=1 0 3 3 0.8214 0 1 1 1 557.27136 1669.79953 1669.79791 0.97 0.00054 0/0 0 0 43278576 HCD 30 MS2 30.44138 427.8 40.107 45.9966 11951 11951 11945 QEplus033719.raw F4 411 323.7 452.6 383.5 492.7 503.4 80 4.59 1 FALSE 1.14E-05 7.30E-09 1.643 -250 46385 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGMDGSGR [R].iGMDGSGR.[S] N-Term(TMT6plex) 2 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 A0A0R4J0I9; Q91ZX7 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 0 2 2 0.5 0 1 1 1 511.26801 1021.52873 1021.5298 -1.04 -0.00053 0/0 0 0 40675708 HCD 30 MS2 28.71966 706.5 27.713 45.9989 11952 11952 11945 QEplus033719.raw F4 736 651.5 808.8 558.8 735.1 748.6 153 2.54 1 FALSE 1.14E-05 0.000282 0.771 -250 46406 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQIGDK [K].nQIGDk.[E] N-Term(TMT6plex); K6(TMT6plex) 8 P20029 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q3U9G2; Q3U6V3; Q3U7T8; Q3TI47 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1 0 2 2 0.122 0 1 1 1 566.84015 1132.67302 1132.67264 0.33 0.00019 0/0 0 0 27789178 HCD 30 MS2 34.13438 1580.1 110 46.0059 11955 11955 11945 QEplus033719.raw F4 3313.2 961.4 1627.8 998.2 847 1733.1 318 2.05 1 FALSE 0.003658 0.07001 0.088 -250 46416 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGIPPDQQR [K].eGIPPDQQR.[LV] N-Term(TMT6plex) 18 P62984; P62983 Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2;Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2 E9Q5F6; P62984; Q922Z8; Q922B0; Q3TH47; Q5SX22; E9Q4P0; P62983; Q78XY9; E9Q9J0; Q8R0Z9; B0LAC2; Q8C2K3; Q8VC46; A5JUZ1; A0A0A6YW67; E9QNP0; P0CG50 Polyubiquitin-C (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=1; Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Polyubiquitin-B (Fragment) OS=Mus musculus OX=10090 GN=Ubb PE=4 SV=2; KxDL motif-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2; Ubiquitin B OS=Mus musculus OX=10090 GN=Ubb PE=2 SV=1; 60S ribosomal protein L40 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=3 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiquitin A-52 residue ribosomal protein fusion product 1 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubb-ps PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiqutin subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Predicted pseudogene 8797 OS=Mus musculus OX=10090 GN=Gm8797 PE=4 SV=1; 60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Polyubiquitin-C OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=2 0 2 2 0.6827 0 1 1 1 634.84412 1268.68096 1268.67963 1.04 0.00066 0/0 0 0 33693256 HCD 30 MS2 13.02479 665.4 67.275 46.0132 11957 11957 11956 QEplus033719.raw F4 657.4 524 725.9 519.3 774 792 285 2.71 2 FALSE 3.35E-05 0.00128 0.64 -250 46418 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLQSIGTENTEENRR [K].rLQSIGTENTEENRR.[F] N-Term(TMT6plex) 9 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 A0A0U1RPT5; D3YWI1; A0A0U1RPN8; A6ZI47; D3YV98; D3Z510; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart2 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=2; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 2 3 3 0.7575 0 1 1 1 678.02997 2032.07535 2032.07329 1.01 0.00069 0/0 0 0 48438200 HCD 30 MS2 0 144.1 48.562 46.0155 11958 11958 11956 QEplus033719.raw F4 171.3 77.5 147.1 172.9 95 201 369 6.68 1 FALSE 1.14E-05 6.31E-16 3.326 -250 46433 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDPSHDASK [K].vDPSHDASk.[V] N-Term(TMT6plex); K9(TMT6plex) 3 Q80X90; Q8VHX6 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3;Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q80X90; Q8VHX6-2; Q8VHX6 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 3 3 0.6535 0 1 1 1 471.92972 1413.7746 1413.77381 0.56 0.00026 0/0 0 0 30686722 HCD 30 MS2 27.58884 671.4 45.229 46.02 11960 11960 11956 QEplus033719.raw F4 788.5 533.5 659.8 569.2 770.8 706.6 268 3.81 2 FALSE 1.14E-05 0.0002162 0.793 -250 46439 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVQEQGTHPK [K].vVQEQGTHPk.[F] N-Term(TMT6plex); K10(TMT6plex) 1 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 3 3 0.6515 0 1 1 1 527.64417 1580.91794 1580.91606 1.19 0.00063 0/0 0 0 24840150 HCD 30 MS2 14.6214 618.9 55.573 46.0222 11961 11961 11956 QEplus033719.raw F4 724.9 518.8 620.6 498 812.4 538.9 457 4.39 1 FALSE 1.14E-05 1.28E-10 1.977 -250 46461 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YALQSQQR [R].yALQSQQR.[W] N-Term(TMT6plex) 3 Q8BWT1 "3-ketoacyl-CoA thiolase, mitochondrial OS=Mus musculus OX=10090 GN=Acaa2 PE=1 SV=3" A0A494B9J2; Q3UKH3; Q8BWT1 "3-ketoacyl-CoA thiolase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Acaa2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acaa2 PE=2 SV=1; 3-ketoacyl-CoA thiolase, mitochondrial OS=Mus musculus OX=10090 GN=Acaa2 PE=1 SV=3" 0 2 2 0.694 0 1 1 1 611.84113 1222.67497 1222.67415 0.67 0.00041 0/0 0 0 20509338 HCD 30 MS2 13.63168 1061.3 110 46.0295 11964 11964 11956 QEplus033719.raw F4 987.7 965.8 1184.6 1247.5 840.2 1141.8 428 2.81 1 FALSE 1.14E-05 0.0001376 0.831 -250 46471 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYEDGCK [K].aYEDGck.[T] N-Term(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 2 2 0.3281 0 1 1 1 650.83484 1300.6624 1300.66076 1.26 0.00082 0/0 0 0 15654545 HCD 30 MS2 11.52232 1144.2 110 46.0321 11965 11965 11956 QEplus033719.raw F4 1391.2 929.2 1246.6 938.5 1376.4 983.6 125 2.56 1 FALSE 0.002413 0.04784 0.149 -250 46481 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGEVPAELRR [R].rGEVPAELRR.[L] N-Term(TMT6plex) 5 Q3UVN5 NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1 Q3KQQ1; Q9CZ44-2; Q3UVN5; Q9CZ44; A2AT02 NSFL1 cofactor p47 (Fragment) OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1; Isoform 2 of NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=1 SV=1; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=1 SV=1 2 4 4 0.6313 0 1 1 1 353.71396 1411.83401 1411.83311 0.63 0.00022 0/0 0 0 10818777 HCD 30 MS2 74.81506 287.4 52.986 46.0343 11966 11966 11956 QEplus033719.raw F4 331.5 178.3 272.5 270 309.2 362.8 250 5.56 1 FALSE 1.14E-05 1.10E-08 1.609 -250 46485 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIDEHANEDVER [R].nIDEHANEDVER.[M] N-Term(TMT6plex) 1 Q4FJL0 Rab10 OS=Mus musculus OX=10090 GN=Rab10 PE=1 SV=1 Q4FJL0 Rab10 OS=Mus musculus OX=10090 GN=Rab10 PE=1 SV=1 0 2 2 0.7077 0 1 1 1 835.40369 1669.8001 1669.79791 1.31 0.00109 0/0 0 0 5304657 HCD 30 MS2 0 232.7 110 46.0416 11968 11968 11967 QEplus033719.raw F4 222.2 185.4 233.8 209.9 307.2 237.8 81 3.9 1 FALSE 1.14E-05 2.08E-10 1.937 -250 46490 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSGPDCNFR [K].tSGPDcNFR.[V] N-Term(TMT6plex); C6(Carbamidomethyl) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.6748 0 1 1 1 641.80695 1282.60661 1282.60475 1.45 0.00093 0/0 0 0 4462405.5 HCD 30 MS2 20.65846 386 110 46.0441 11969 11969 11967 QEplus033719.raw F4 425.2 168.8 323.5 494.9 252.4 651.1 64 3.26 2 FALSE 6.52E-05 0.002673 0.57 -250 46505 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVGRPALER [R].sVGRPALER.[F] N-Term(TMT6plex) 6 Q3THP1 Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1 Q99KK7; Q3THP1; Q6NXZ0; Q3UDD5; Q3UDF3; Q8BU29 Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=1 SV=2; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1 0 3 3 0.3633 0 1 1 1 405.24561 1213.72226 1213.72144 0.68 0.00028 0/0 0 0 53610200 HCD 30 MS2 27.7358 497.7 20.776 46.0509 11972 11972 11967 QEplus033719.raw F4 512.3 347.5 532 453.5 545.6 595.5 270 2.56 1 FALSE 3.35E-05 0.001133 0.651 -250 46512 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRAPISAK [K].sRAPISAk.[L] N-Term(TMT6plex); K8(TMT6plex) 8 G3UXL2 Ribose-phosphate diphosphokinase OS=Mus musculus OX=10090 GN=Prps1l3 PE=3 SV=1 G3UXL2; Q3UPD5; Q32M04; Q3UYQ0; Q9CVZ1; Q8C5R8; Q9CS42; Q9D7G0 Ribose-phosphate diphosphokinase OS=Mus musculus OX=10090 GN=Prps1l3 PE=3 SV=1; Ribose-phosphate diphosphokinase OS=Mus musculus OX=10090 GN=Prps1 PE=2 SV=1; Ribose-phosphate diphosphokinase OS=Mus musculus OX=10090 GN=Prps1l1 PE=2 SV=1; Ribose-phosphate diphosphokinase OS=Mus musculus OX=10090 GN=Prps1l3 PE=2 SV=1; Ribose-phosphate diphosphokinase (Fragment) OS=Mus musculus OX=10090 GN=Prps1l1 PE=2 SV=1; Ribose-phosphate diphosphokinase OS=Mus musculus OX=10090 GN=Prps1l1 PE=1 SV=1; Ribose-phosphate pyrophosphokinase 2 OS=Mus musculus OX=10090 GN=Prps2 PE=1 SV=4; Ribose-phosphate pyrophosphokinase 1 OS=Mus musculus OX=10090 GN=Prps1 PE=1 SV=4 1 3 3 0.5407 0 1 1 1 429.94366 1287.81644 1287.81489 1.2 0.00052 0/0 0 0 33087892 HCD 30 MS2 61.92367 683.8 27.166 46.0554 11974 11974 11967 QEplus033719.raw F4 757.4 583.4 671.8 506.1 917.3 667 482 3.07 1 FALSE 1.14E-05 0.0003202 0.76 -250 46519 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNWATR [R].tNWATR.[K] N-Term(TMT6plex) 12 P52912; Q921W2 Nucleolysin TIA-1 OS=Mus musculus OX=10090 GN=Tia1 PE=1 SV=1;Nucleolysin TIAR OS=Mus musculus OX=10090 GN=Tial1 PE=1 SV=1 Q8CII5; P52912; A0A0U1RPD3; D3Z4H6; Q6NVC2; Q921W2; Q80ZW7; D3YY02; G5E8L2; Q8BT02; Q545C1; D3Z3Y4 Nucleolysin TIA-1 OS=Mus musculus OX=10090 GN=Tia1 PE=1 SV=1; Nucleolysin TIA-1 OS=Mus musculus OX=10090 GN=Tia1 PE=1 SV=1; Nucleolysin TIAR OS=Mus musculus OX=10090 GN=Tial1 PE=1 SV=1; Nucleolysin TIA-1 OS=Mus musculus OX=10090 GN=Tia1 PE=1 SV=1; Tial1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tial1 PE=2 SV=1; Nucleolysin TIAR OS=Mus musculus OX=10090 GN=Tial1 PE=1 SV=1; Nucleolysin TIA-1 OS=Mus musculus OX=10090 GN=Tia1 PE=1 SV=1; Nucleolysin TIA-1 OS=Mus musculus OX=10090 GN=Tia1 PE=1 SV=1; Nucleolysin TIA-1 OS=Mus musculus OX=10090 GN=Tia1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tia1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tial1 PE=1 SV=1; Nucleolysin TIAR OS=Mus musculus OX=10090 GN=Tial1 PE=1 SV=2 0 2 2 0.3256 0 1 1 1 489.27301 977.53874 977.5366 2.2 0.00107 0/0 0 0 30287946 HCD 30 MS2 24.97587 844.9 38.984 46.0577 11975 11975 11967 QEplus033719.raw F4 1071.6 669.1 877 594 886.9 970.8 146 2.15 2 FALSE 0.002869 0.05595 0.125 -250 46558 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLQSIGTENTEENRR [K].rLQSIGTENTEENRR.[F] N-Term(TMT6plex) 9 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 A0A0U1RPT5; D3YWI1; A0A0U1RPN8; A6ZI47; D3YV98; D3Z510; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart2 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=2; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 2 4 4 0.7261 0 1 1 1 508.77539 2032.07973 2032.07329 3.17 0.00161 0/0 0 0 704279040 HCD 30 MS2 3.368164 116 1.799 46.0743 11981 11981 11978 QEplus033719.raw F4 141.8 70.6 118 137.5 72.6 155.4 372 6.06 1 FALSE 1.14E-05 6.31E-16 3.106 -250 46591 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVSAQEVR [K].kVSAQEVR.[K] N-Term(TMT6plex); K1(TMT6plex) 4 Q4KML7 Ezrin OS=Mus musculus OX=10090 GN=Ezr PE=1 SV=1 Q3UXR4; Q4KML7; Q3TCP5; Q3UL48 FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; Ezrin OS=Mus musculus OX=10090 GN=Ezr PE=1 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1 1 3 3 0.3871 0 1 1 1 458.95398 1374.84739 1374.84692 0.34 0.00016 0/0 0 0 34496824 HCD 30 MS2 31.23715 980.6 46.626 46.0833 11985 11985 11978 QEplus033719.raw F4 1007.7 829.1 1046.6 917.9 1070.3 1011.8 490 3.1 1 FALSE 1.14E-05 0.0002001 0.799 -250 46604 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLQSIGTENTEENRR [K].rLQSIGTENTEENRR.[F] N-Term(TMT6plex) 9 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 A0A0U1RPT5; D3YWI1; A0A0U1RPN8; A6ZI47; D3YV98; D3Z510; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart2 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=2; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 2 2 2 0.6725 0 1 1 1 1016.54236 2032.07744 2032.07329 2.04 0.00207 0/0 0 0 7814783 HCD 30 MS2 0 24.8 110 46.0881 11987 11987 11978 QEplus033719.raw F4 27.6 17.4 28.1 31.3 14.3 30.4 372 4.03 1 FALSE 1.14E-05 3.33E-09 1.708 -250 46611 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAGEPGDVEPR [R].eAGEPGDVEPR.[R] N-Term(TMT6plex) 3 Q571F9 MKIAA4115 protein (Fragment) OS=Mus musculus OX=10090 GN=G3bp1 PE=2 SV=1 Q571F9; Q3UR88; P97855 MKIAA4115 protein (Fragment) OS=Mus musculus OX=10090 GN=G3bp1 PE=2 SV=1; NTF2 domain-containing protein OS=Mus musculus OX=10090 GN=G3bp1 PE=2 SV=1; Ras GTPase-activating protein-binding protein 1 OS=Mus musculus OX=10090 GN=G3bp1 PE=1 SV=1 0 2 2 0.693 0 1 1 1 692.84937 1384.69145 1384.69059 0.62 0.00043 0/0 0 0 7701960.5 HCD 30 MS2 0 359.7 110 46.0906 11988 11988 11978 QEplus033719.raw F4 371.8 307.3 387 271.9 443.1 377 111 3.16 1 FALSE 1.14E-05 1.37E-07 1.402 -250 46617 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAFPNTNR [R].qAFPNTNR.[W] N-Term(TMT6plex) 2 Q9D8N0 Elongation factor 1-gamma OS=Mus musculus OX=10090 GN=Eef1g PE=1 SV=3 Q8R1N8; Q9D8N0 Eef1g protein OS=Mus musculus OX=10090 GN=Eef1g PE=2 SV=1; Elongation factor 1-gamma OS=Mus musculus OX=10090 GN=Eef1g PE=1 SV=3 0 2 2 0.3986 0 1 1 1 588.8194 1176.63152 1176.63229 -0.65 -0.00038 0/0 0 0 5894120.5 HCD 30 MS2 0 502.8 110 46.098 11990 11990 11989 QEplus033719.raw F4 526.9 348.7 551.7 460.5 503.8 625.1 308 2.81 1 FALSE 5.44E-05 0.00245 0.579 -250 46626 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTPQSDGSSSK [K].vTPQSDGSSSk.[V] N-Term(TMT6plex); K11(TMT6plex) 4 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 0 2 2 0.6253 0 1 1 1 775.92572 1550.84416 1550.84262 0.99 0.00077 0/0 0 0 14137735 HCD 30 MS2 0 466.2 110 46.1005 11991 11991 11989 QEplus033719.raw F4 664.6 330.2 562.3 398.9 413.8 427.5 341 3.79 1 FALSE 1.14E-05 1.26E-09 1.788 -250 46635 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVQEQGTHPK [K].vVQEQGTHPk.[F] N-Term(TMT6plex); K10(TMT6plex) 1 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 2 2 0.6613 0 1 1 1 790.96326 1580.91924 1580.91606 2.01 0.00159 0/0 0 0 9408535 HCD 30 MS2 0 377.2 110 46.103 11992 11992 11989 QEplus033719.raw F4 421.4 332.4 370.1 315.1 519.5 304.8 453 3.75 1 FALSE 1.14E-05 6.26E-07 1.276 -250 46650 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TMQNTNDVETAR [R].tMQNTNDVETAR.[C] N-Term(TMT6plex) 4 Q02248 Catenin beta-1 OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1 F6QZ47; Q02248; E9Q6A9; Q3UZT7 Catenin beta-1 (Fragment) OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1; Catenin beta-1 OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1; Catenin beta-1 OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctnnb1 PE=2 SV=1 0 2 2 0.7584 0 1 1 1 804.89868 1608.79009 1608.7849 3.22 0.00259 0/0 0 0 7624823 HCD 30 MS2 13.3696 293 110 46.108 11994 11994 11989 QEplus033719.raw F4 305.4 192.2 333.8 202.8 442.6 281.4 121 4.76 1 FALSE 1.14E-05 3.70E-08 1.509 -250 46667 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPPAEGQEK [K].tPPAEGQEk.[Q] N-Term(TMT6plex); K9(TMT6plex) 2 Q9QZE7 Translin-associated protein X OS=Mus musculus OX=10090 GN=Tsnax PE=1 SV=1 Q9QZE7; Q3TXK6 Translin-associated protein X OS=Mus musculus OX=10090 GN=Tsnax PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tsnax PE=2 SV=1 0 2 2 0.5466 0 1 1 1 707.90222 1414.79717 1414.79422 2.09 0.00148 0/0 0 0 4178534.25 HCD 30 MS2 9.806787 290.7 110 46.1131 11996 11996 11989 QEplus033719.raw F4 313.9 238.2 288.2 260.4 354.3 289.1 393 2.47 1 FALSE 2.26E-05 0.001052 0.658 -250 46675 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANGVEINR [R].aNGVEINR.[E] N-Term(TMT6plex) 2 Q91YR7 Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1 Q91YR7; Q91YR7-2 Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1; Isoform 2 of Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 0 2 2 0.4625 0 1 1 1 551.31604 1101.6248 1101.62139 3.1 0.00171 0/0 0 0 4181812.5 HCD 30 MS2 18.20277 553.4 110 46.1156 11997 11997 11989 QEplus033719.raw F4 578.6 466.8 621.1 437.7 577.8 638.3 271 2.4 1 FALSE 4.43E-05 0.001469 0.627 -250 46693 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPPGPPGPQGESR [R].gPPGPPGPQGESR.[T] N-Term(TMT6plex) 7 Q60847; F6WIM8 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3;Collagen alpha-1(XII) chain (Fragment) OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1 Q60847; F6WIM8; Q60847-3; E9PX70; Q60847-5; Q60847-4; Q60847-2 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3; Collagen alpha-1(XII) chain (Fragment) OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1; Isoform 3 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1; Isoform 5 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 4 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 2 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 0 2 2 0.6027 0 1 1 1 731.38751 1461.76775 1461.76476 2.05 0.0015 0/0 0 0 3237140.75 HCD 30 MS2 16.7615 170.8 110 46.1304 12002 12002 12000 QEplus033719.raw F4 158.5 155.4 157.2 77.4 331.5 145.1 269 3.75 2 FALSE 1.14E-05 2.17E-06 1.173 -250 46703 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTLQLHR [R].nTLQLHR.[Y] N-Term(TMT6plex) 2 Q5M8Q0 Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1 Q5M8Q0; Q3U7D2 Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1; Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1 0 3 3 0.4286 0 1 1 1 370.89139 1110.65961 1110.65811 1.35 0.0005 0/0 0 0 87626824 HCD 30 MS2 7.479407 165.2 15.807 46.1327 12003 12003 12000 QEplus033719.raw F4 200.3 117.1 187 135.2 178.9 172.8 150 3.71 1 FALSE 0.0008899 0.01232 0.369 -250 46715 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEYEEGGK [K].qEYEEGGk.[Q] N-Term(TMT6plex); K8(TMT6plex) 2 Q505L1 Actl6a protein OS=Mus musculus OX=10090 GN=Actl6a PE=1 SV=1 Q505L1; Q99MR0 Actl6a protein OS=Mus musculus OX=10090 GN=Actl6a PE=1 SV=1; Actin-like protein 6B OS=Mus musculus OX=10090 GN=Actl6b PE=1 SV=1 0 2 2 0.5906 0 1 1 1 699.36975 1397.73223 1397.73128 0.68 0.00047 0/0 0 0 8636736 HCD 30 MS2 15.48998 495.4 110 46.1377 12005 12005 12000 QEplus033719.raw F4 522.4 463.3 491.1 401.5 656.4 437.4 215 2.98 1 FALSE 1.14E-05 0.0004107 0.739 -250 46722 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGENYQQNCAK [R].eGENYQQNcAk.[E] N-Term(TMT6plex); C9(Carbamidomethyl); K11(TMT6plex) 2 Q9DCS9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 OS=Mus musculus OX=10090 GN=Ndufb10 PE=1 SV=3 Q9DCS9; D3YUK4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 OS=Mus musculus OX=10090 GN=Ndufb10 PE=1 SV=3; Complex I-PDSW (Fragment) OS=Mus musculus OX=10090 GN=Ndufb10 PE=1 SV=1 0 2 2 0.7596 0 1 1 1 899.94452 1798.88176 1798.87942 1.3 0.00117 0/0 0 0 8408446 HCD 30 MS2 5.138342 453 110 46.1402 12006 12006 12000 QEplus033719.raw F4 429.1 328.2 497.9 553.1 373.5 535.9 147 4.7 1 FALSE 1.14E-05 9.40E-10 1.812 -250 46731 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLANQTVGR [KR].qLANQTVGR.[AL] N-Term(TMT6plex) 10 Q3UIA2 Rho GTPase-activating protein 17 OS=Mus musculus OX=10090 GN=Arhgap17 PE=1 SV=1 Q3UIA2-2; Q3UIA2-4; A0A0U1RNM6; Q5SSM3; E9QAJ9; Q3UIA2-3; A0A0U1RPK6; Q5SSM3-2; Q3UIA2; Q5SSM3-3 Isoform 2 of Rho GTPase-activating protein 17 OS=Mus musculus OX=10090 GN=Arhgap17; Isoform 4 of Rho GTPase-activating protein 17 OS=Mus musculus OX=10090 GN=Arhgap17; Rho GTPase-activating protein 17 OS=Mus musculus OX=10090 GN=Arhgap17 PE=1 SV=1; Rho GTPase-activating protein 44 OS=Mus musculus OX=10090 GN=Arhgap44 PE=1 SV=1; Rho GTPase-activating protein 17 OS=Mus musculus OX=10090 GN=Arhgap17 PE=1 SV=1; Isoform 3 of Rho GTPase-activating protein 17 OS=Mus musculus OX=10090 GN=Arhgap17; Rho GTPase-activating protein 17 OS=Mus musculus OX=10090 GN=Arhgap17 PE=4 SV=1; Isoform 2 of Rho GTPase-activating protein 44 OS=Mus musculus OX=10090 GN=Arhgap44; Rho GTPase-activating protein 17 OS=Mus musculus OX=10090 GN=Arhgap17 PE=1 SV=1; Isoform 3 of Rho GTPase-activating protein 44 OS=Mus musculus OX=10090 GN=Arhgap44 0 2 2 0.3801 0 1 1 1 608.35443 1215.70159 1215.7007 0.73 0.00044 0/0 0 0 4366266 HCD 30 MS2 36.53981 414.3 110 46.1453 12008 12008 12000 QEplus033719.raw F4 435.7 358.5 448.9 334.5 484 424.3 395 2.71 1 FALSE 1.14E-05 1.55E-05 1.012 -250 46741 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLQEAEQTK [R].hLQEAEQTk.[A] N-Term(TMT6plex); K9(TMT6plex) 4 E9QKZ2 Importin-9 OS=Mus musculus OX=10090 GN=Ipo9 PE=1 SV=1 E9QKZ2; Q4G0B8; Q91YE6; E0CXB2 Importin-9 OS=Mus musculus OX=10090 GN=Ipo9 PE=1 SV=1; Importin 9 OS=Mus musculus OX=10090 GN=Ipo9 PE=2 SV=1; Importin-9 OS=Mus musculus OX=10090 GN=Ipo9 PE=1 SV=3; Importin-9 OS=Mus musculus OX=10090 GN=Ipo9 PE=1 SV=1 0 2 2 0.7564 0 1 1 1 771.44092 1541.87456 1541.86878 3.75 0.00289 0/0 0 0 3739758.25 HCD 30 MS2 0 156.8 110 46.1478 12009 12009 12000 QEplus033719.raw F4 166.3 128.2 155.9 127.8 220.7 142 418 3.9 1 FALSE 1.14E-05 2.67E-07 1.346 -250 46753 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EATDEELER [K].eATDEELER.[I] N-Term(TMT6plex) 3 Q3TCH7 Cullin-4A OS=Mus musculus OX=10090 GN=Cul4a PE=1 SV=1 Q3TCH7; Q8R1T2; Q3UD60 Cullin-4A OS=Mus musculus OX=10090 GN=Cul4a PE=1 SV=1; Cul4a protein OS=Mus musculus OX=10090 GN=Cul4a PE=2 SV=1; Cullin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Cul4a PE=2 SV=1 0 2 2 0.4958 0 1 1 1 660.82996 1320.65264 1320.64806 3.47 0.00229 0/0 0 0 3986704.25 HCD 30 MS2 17.84168 334.9 110 46.1576 12012 12012 12011 QEplus033719.raw F4 372 256.4 365.5 312.1 321.2 382.3 111 3.53 1 FALSE 1.14E-05 3.46E-06 1.135 -250 46766 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GANPVEIRR [K].gANPVEIRR.[G-] N-Term(TMT6plex) 3 P63038 "60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" D3Z2F2; D3Z7J9; P63038 "60 kDa heat shock protein, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1; 60 kDa heat shock protein, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1; 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" 1 3 3 0.5204 0 1 1 1 414.24908 1240.7327 1240.73233 0.29 0.00012 0/0 0 0 61687696 HCD 30 MS2 25.0591 375.5 19.935 46.1646 12015 12015 12011 QEplus033719.raw F4 400.3 349.4 444.5 301.8 406.1 351.2 288 4.17 1 FALSE 1.14E-05 1.65E-08 1.576 -250 46782 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DPDSFR [K].dPDSFR.[A] N-Term(TMT6plex) 2 P08030 Adenine phosphoribosyltransferase OS=Mus musculus OX=10090 GN=Aprt PE=1 SV=2 A0A1D5RLR6; P08030 Adenine phosphoribosyltransferase OS=Mus musculus OX=10090 GN=Aprt PE=1 SV=1; Adenine phosphoribosyltransferase OS=Mus musculus OX=10090 GN=Aprt PE=1 SV=2 0 2 2 0.3442 0 1 1 1 483.24893 965.49059 965.48898 1.67 0.00081 0/0 0 0 39653160 HCD 30 MS2 27.76956 979.2 44.177 46.1691 12017 12017 12011 QEplus033719.raw F4 1198.4 845.8 1000.6 729.4 1185.7 915.2 90 2.15 1 FALSE 0.004181 0.0766 0.07 -250 46790 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVQEQGTHPK [K].vVQEQGTHPk.[F] N-Term(TMT6plex); K10(TMT6plex) 1 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 4 4 0.4613 0 1 1 1 395.9848 1580.91738 1580.91606 0.83 0.00033 0/0 0 0 24936106 HCD 30 MS2 43.77917 397 33.466 46.1714 12018 12018 12011 QEplus033719.raw F4 413.7 307.9 419.8 326 519.8 394.6 460 2.71 1 FALSE 5.44E-05 0.002076 0.595 -250 46799 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGAESHTFK [R].gGAESHTFk.[-] N-Term(TMT6plex); K9(TMT6plex) 3 P63254 Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=2 P63254; Q6P3B4; A0A0G2JEK2 Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=2; Cysteine-rich protein 1 (Intestinal) OS=Mus musculus OX=10090 GN=Crip1 PE=2 SV=1; Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=1 0 3 3 0.5794 0 1 1 1 464.59457 1391.76917 1391.76833 0.6 0.00028 0/0 0 0 24905746 HCD 30 MS2 29.64223 1190 60.61 46.1736 12019 12019 12011 QEplus033719.raw F4 1421.4 1039.1 1163.2 954.5 1491.4 1070.4 383 3.78 1 FALSE 1.14E-05 6.16E-06 1.087 -250 46816 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGEVPAELRR [R].rGEVPAELRR.[L] N-Term(TMT6plex) 5 Q3UVN5 NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1 Q3KQQ1; Q9CZ44-2; Q3UVN5; Q9CZ44; A2AT02 NSFL1 cofactor p47 (Fragment) OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1; Isoform 2 of NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=1 SV=1; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=1 SV=1 2 3 3 0.5681 0 1 1 1 471.28314 1411.83487 1411.83311 1.25 0.00059 0/0 0 0 13773624 HCD 30 MS2 29.55464 448.1 102.787 46.1785 12021 12021 12011 QEplus033719.raw F4 487 380.9 488.7 370.2 477.8 484.3 256 4.77 1 FALSE 1.14E-05 7.26E-07 1.264 -250 46822 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MIYCSHCR [K].mIYcSHcR.[G] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl) 1 P51655 Glypican-4 OS=Mus musculus OX=10090 GN=Gpc4 PE=1 SV=2 P51655 Glypican-4 OS=Mus musculus OX=10090 GN=Gpc4 PE=1 SV=2 0 3 3 0.7774 0 1 1 1 452.54541 1355.62168 1355.622 -0.24 -0.00011 0/0 0 0 12112553 HCD 30 MS2 71.45465 1051.2 110 46.1858 12023 12023 12022 QEplus033719.raw F4 1255 820 1017.7 981 1123 1110.4 16 3.37 1 FALSE 0.001456 0.02101 0.273 -250 46829 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSTSNVEQYR [K].tSTSNVEQYR.[A] N-Term(TMT6plex) 3 Q7M739 Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1 Q7M739; F6ZDS4; Q3V1L5 Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1 0 2 2 0.6836 0 1 1 1 707.36365 1413.72002 1413.71714 2.04 0.00144 0/0 0 0 8232590.5 HCD 30 MS2 13.95263 326.9 110 46.1883 12024 12024 12022 QEplus033719.raw F4 327.4 332.4 346.7 263.5 394.8 296.7 175 3.35 1 FALSE 1.14E-05 4.48E-08 1.494 -250 46844 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQEAEMAQNAVR [R].hQEAEMAQNAVR.[L] N-Term(TMT6plex) 5 Q02248 Catenin beta-1 OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1 F7BAC9; Q80VE7; Q02248; E9Q6A9; Q3UZT7 Catenin beta-1 (Fragment) OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1; Ctnnb1 protein (Fragment) OS=Mus musculus OX=10090 GN=Ctnnb1 PE=2 SV=1; Catenin beta-1 OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1; Catenin beta-1 OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctnnb1 PE=2 SV=1 0 3 3 0.756 0 1 1 1 538.27393 1612.80722 1612.8063 0.57 0.00031 0/0 0 0 21937856 HCD 30 MS2 12.0432 419.6 88.975 46.1951 12027 12027 12022 QEplus033719.raw F4 470.8 300.3 443.9 328.6 482.7 491.3 193 5.86 1 FALSE 1.14E-05 1.07E-10 1.992 -250 46850 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSTEVDAR [R].vSTEVDAR.[L] N-Term(TMT6plex) 2 Q93092 Transaldolase OS=Mus musculus OX=10090 GN=Taldo1 PE=1 SV=2 Q93092; A0A1B0GR11 Transaldolase OS=Mus musculus OX=10090 GN=Taldo1 PE=1 SV=2; Transaldolase OS=Mus musculus OX=10090 GN=Taldo1 PE=1 SV=1 0 2 2 0.5779 0 1 1 1 553.30725 1105.60723 1105.60507 1.95 0.00108 0/0 0 0 19975082 HCD 30 MS2 8.585815 963.2 98.686 46.1974 12028 12028 12022 QEplus033719.raw F4 1296.7 778.5 1002.4 782.2 899.1 1020.4 212 2.89 1 FALSE 1.14E-05 0.0001679 0.814 -250 46858 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAGGQGQLDVR [R].gAGGQGQLDVR.[M] N-Term(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.3604 0 1 1 1 643.85498 1286.70268 1286.70143 0.98 0.00063 0/0 0 0 16122136 HCD 30 MS2 12.73192 830.6 110 46.1999 12029 12029 12022 QEplus033719.raw F4 970.4 409.4 986.3 966.4 487.4 1163.5 288 3.33 1 FALSE 1.14E-05 3.23E-07 1.331 -250 46882 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STEALPER [R].sTEALPER.[A] N-Term(TMT6plex) 2 E9Q6R7 Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 O08614; E9Q6R7 Cytoskeletal protein OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 0 2 2 0.1111 0 1 1 1 566.31586 1131.62444 1131.62072 3.29 0.00186 0/0 0 0 11043194 HCD 30 MS2 46.63593 862.2 110 46.2074 12032 12032 12022 QEplus033719.raw F4 1192.7 608.2 936.6 771.9 636.8 1027 313 2.34 1 FALSE 2.26E-05 0.001079 0.655 -250 46888 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLTASGNSCR [K].vLTASGNScR.[V] N-Term(TMT6plex); C9(Carbamidomethyl) 2 D3Z132 THO complex subunit 6 homolog OS=Mus musculus OX=10090 GN=Thoc6 PE=1 SV=1 D3Z132; Q5U4D9 THO complex subunit 6 homolog OS=Mus musculus OX=10090 GN=Thoc6 PE=1 SV=1; THO complex subunit 6 homolog OS=Mus musculus OX=10090 GN=Thoc6 PE=1 SV=1 0 2 2 0.5659 0 1 1 1 647.34399 1293.68071 1293.67825 1.9 0.00123 0/0 0 0 7806340 HCD 30 MS2 17.8034 471.8 110 46.2147 12034 12034 12033 QEplus033719.raw F4 561 464.2 529.9 312.1 497.9 465.5 223 3.11 1 FALSE 1.14E-05 4.92E-08 1.486 -250 46897 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYVAYSHTGR [K].eYVAYSHTGR.[I] N-Term(TMT6plex) 5 Q69ZP5 MKIAA1181 protein (Fragment) OS=Mus musculus OX=10090 GN=Ergic1 PE=2 SV=1 Q69ZP5; A0A494BAK4; Q4FK22; F6SLP4; A0A494BAW5 MKIAA1181 protein (Fragment) OS=Mus musculus OX=10090 GN=Ergic1 PE=2 SV=1; Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Mus musculus OX=10090 GN=Ergic1 PE=1 SV=1; 1200007D18Rik protein OS=Mus musculus OX=10090 GN=Ergic1 PE=1 SV=1; Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Mus musculus OX=10090 GN=Ergic1 PE=1 SV=2; Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Mus musculus OX=10090 GN=Ergic1 PE=1 SV=1 0 3 3 0.7267 0 1 1 1 471.24518 1411.72098 1411.71674 3 0.00141 0/0 0 0 6234006 HCD 30 MS2 61.68879 475.7 110 46.2172 12035 12035 12033 QEplus033719.raw F4 508.8 389.3 522.4 363.3 542 528.5 179 4.39 1 FALSE 1.14E-05 4.82E-07 1.298 -250 46902 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASGTVNIR [K].aSGTVNIR.[T] N-Term(TMT6plex) 3 Q9D0R2 "Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2" Q3U630; Q9D0R2; Q99KJ4 "Threonyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1; Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2; Threonyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1" 0 2 2 0.4771 0 1 1 1 523.81268 1046.61809 1046.61557 2.4 0.00126 0/0 0 0 91469072 HCD 30 MS2 14.09712 694.4 13.221 46.2217 12037 12037 12033 QEplus033719.raw F4 669.7 610.4 811.3 626.4 659.2 789.5 244 2.62 1 FALSE 1.14E-05 0.0003734 0.747 -250 46911 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTLQLHR [R].nTLQLHR.[Y] N-Term(TMT6plex) 2 Q5M8Q0 Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1 Q5M8Q0; Q3U7D2 Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1; Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1 0 2 2 0.4245 0 1 1 1 555.83319 1110.65911 1110.65811 0.9 0.0005 0/0 0 0 48913012 HCD 30 MS2 14.33295 631.7 30.715 46.224 12038 12038 12033 QEplus033719.raw F4 657.9 529.6 715.9 512.7 701.8 672.1 154 2.45 1 FALSE 0.002275 0.04474 0.158 -250 46921 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRSEPNMNPK [K].gRSEPNMNPk.[L] N-Term(TMT6plex); K10(TMT6plex) 7 B9EK95 Myof protein OS=Mus musculus OX=10090 GN=Myof PE=2 SV=1 A0A286YDF5; B9EK95; Q69ZN7-4; E9Q390; A0A286YDV5; A0A286YCZ3; Q69ZN7 Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=1; Myof protein OS=Mus musculus OX=10090 GN=Myof PE=2 SV=1; Isoform 4 of Myoferlin OS=Mus musculus OX=10090 GN=Myof; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=2; Myoferlin (Fragment) OS=Mus musculus OX=10090 GN=Myof PE=1 SV=1; Myoferlin (Fragment) OS=Mus musculus OX=10090 GN=Myof PE=1 SV=1; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=2 1 3 3 0.622 0 1 1 1 529.96069 1587.86753 1587.86773 -0.13 -0.00007 0/0 0 0 10313956 HCD 30 MS2 21.65736 766.6 110 46.2332 12042 12042 12033 QEplus033719.raw F4 825.4 676.8 822 548 949.5 778 388 4.1 1 FALSE 1.14E-05 2.31E-05 0.978 -250 46927 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRPGLPGAAGAR [R].gRPGLPGAAGAR.[G] N-Term(TMT6plex) 8 Q7TT32; P04258 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1;SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain" Q8BKY2; Q7TT32; Q5DTG2; P04258; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 2 2 0.6406 0 1 1 1 654.88983 1308.77239 1308.76978 1.99 0.0013 0/0 0 0 9859836 HCD 30 MS2 40.97573 522.7 110 46.2358 12043 12043 12033 QEplus033719.raw F4 579.8 416.9 584.5 438.6 543.7 572.6 371 2.17 2 TRUE 1.14E-05 0.0003747 0.747 -250 46936 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGAESHTFK [R].gGAESHTFk.[-] N-Term(TMT6plex); K9(TMT6plex) 3 P63254 Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=2 P63254; Q6P3B4; A0A0G2JEK2 Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=2; Cysteine-rich protein 1 (Intestinal) OS=Mus musculus OX=10090 GN=Crip1 PE=2 SV=1; Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=1 0 2 2 0.555 0 1 1 1 696.38806 1391.76885 1391.76833 0.37 0.00026 0/0 0 0 13870655 HCD 30 MS2 0 683.7 110 46.2431 12045 12045 12044 QEplus033719.raw F4 763.1 611.5 667.6 568.5 889.8 601.5 383 4.09 1 FALSE 1.14E-05 1.17E-06 1.224 -250 46949 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQNDPLPGR [K].nQNDPLPGR.[I] N-Term(TMT6plex) 8 Q3U1S6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1 A0A0G2JF72; Q3U1S6; Q8JZN2; Q8R3R1; Q3U672; Q3U4S7; Q3TXH7; Q80TP8 Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Csde1 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; MKIAA0885 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1 0 2 2 0.5584 0 1 1 1 620.33612 1239.66496 1239.66431 0.52 0.00032 0/0 0 0 22800496 HCD 30 MS2 42.33998 488.2 38.609 46.2479 12047 12047 12044 QEplus033719.raw F4 493.9 456 550.4 359.6 574.1 495.4 261 2.74 1 FALSE 1.14E-05 0.0004683 0.728 -250 46999 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASPPLEGSR [R].aSPPLEGSR.[F] N-Term(TMT6plex) 5 E9PWK1 Epoxide hydrolase OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=1 D3Z4M3; Q8K2W5; E9PWK1; Q9D379; Q6PEV0 Epoxide hydrolase 1 (Fragment) OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=1; Epoxide hydrolase OS=Mus musculus OX=10090 GN=Ephx1 PE=2 SV=1; Epoxide hydrolase OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=1; Epoxide hydrolase 1 OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=2; Epoxide hydrolase OS=Mus musculus OX=10090 GN=Ephx1 PE=2 SV=1 0 2 2 0.5574 0 1 1 1 571.82269 1142.63811 1142.6367 1.23 0.0007 0/0 0 0 47943560 HCD 30 MS2 13.19441 545.8 26.525 46.2712 12056 12056 12055 QEplus033719.raw F4 450.4 576.5 714.3 386.8 576.7 570.1 174 2.96 1 FALSE 0.0009075 0.01251 0.366 -250 47006 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAALEEEQAR [K].qAALEEEQAR.[L] N-Term(TMT6plex) 9 Q570Z8 MKIAA4114 protein (Fragment) OS=Mus musculus OX=10090 GN=Picalm PE=2 SV=1 Q570Z8; Q7M6Y3; Q7M6Y3-5; Q7M6Y3-6; Q7M6Y3-4; A0A140LHQ8; A0A1L1SUR7; Q7M6Y3-2; Q7M6Y3-3 MKIAA4114 protein (Fragment) OS=Mus musculus OX=10090 GN=Picalm PE=2 SV=1; Phosphatidylinositol-binding clathrin assembly protein OS=Mus musculus OX=10090 GN=Picalm PE=1 SV=1; Isoform 5 of Phosphatidylinositol-binding clathrin assembly protein OS=Mus musculus OX=10090 GN=Picalm; Isoform 6 of Phosphatidylinositol-binding clathrin assembly protein OS=Mus musculus OX=10090 GN=Picalm; Isoform 4 of Phosphatidylinositol-binding clathrin assembly protein OS=Mus musculus OX=10090 GN=Picalm; Phosphatidylinositol-binding clathrin assembly protein (Fragment) OS=Mus musculus OX=10090 GN=Picalm PE=1 SV=1; Phosphatidylinositol-binding clathrin assembly protein (Fragment) OS=Mus musculus OX=10090 GN=Picalm PE=1 SV=1; Isoform 2 of Phosphatidylinositol-binding clathrin assembly protein OS=Mus musculus OX=10090 GN=Picalm; Isoform 3 of Phosphatidylinositol-binding clathrin assembly protein OS=Mus musculus OX=10090 GN=Picalm 0 2 2 0.7444 0 1 1 1 687.36554 1373.7238 1373.72222 1.15 0.00079 0/0 0 0 20926666 HCD 30 MS2 6.272506 538 110 46.2737 12057 12057 12055 QEplus033719.raw F4 559.2 510.9 610.1 427.8 610.2 509.8 225 3.99 1 FALSE 1.14E-05 2.00E-07 1.37 -250 47015 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAPIVNR [R].dAPIVNR.[V] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.3947 0 1 1 1 507.30188 1013.59648 1013.59411 2.34 0.00119 0/0 0 0 1069557184 HCD 30 MS2 2.849452 494.3 1.267 46.276 12058 12058 12055 QEplus033719.raw F4 466.1 405.5 582.8 661 303.7 546.5 134 2.28 3 FALSE 0.003616 0.06935 0.089 -250 47020 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIGDCVR [R].gIGDcVR.[Q] N-Term(TMT6plex); C5(Carbamidomethyl) 1 Q8JZU2 "Tricarboxylate transport protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a1 PE=1 SV=1" Q8JZU2 "Tricarboxylate transport protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a1 PE=1 SV=1" 0 2 2 0.4891 0 1 1 1 503.27228 1005.53728 1005.53488 2.39 0.0012 0/0 0 0 18111268 HCD 30 MS2 69.74034 940.2 34.747 46.2782 12059 12059 12055 QEplus033719.raw F4 1049.7 808.5 1079 852.9 852.2 998.9 242 1.84 1 FALSE 0.002132 0.03993 0.175 -250 47026 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLEEEEQRR [K].vLEEEEQRR.[K] N-Term(TMT6plex) 9 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; Q3UGC3; E9QA15; F6ZAW1; E9Q0M9; D3Z6I7; S4R1T7; E9QA16; F6QLP8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 1 3 3 0.6464 0 1 1 1 472.92679 1416.76581 1416.76442 0.98 0.00046 0/0 0 0 16719560 HCD 30 MS2 38.58124 1174.5 97.107 46.2805 12060 12060 12055 QEplus033719.raw F4 1152.7 1094.5 1227 889.3 1506.6 1176.7 322 3.79 1 FALSE 1.14E-05 4.30E-05 0.927 -250 47032 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYDETYTR [R].tYDETYTR.[Y] N-Term(TMT6plex) 4 Q9DBR7 Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2 Q3TS88; Q9DBR7; A0A1W2P750; Q9DBR7-2 PRKG1_interact domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ppp1r12a PE=2 SV=1; Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2; Protein phosphatase 1 regulatory subunit 12A (Fragment) OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=1; Isoform 2 of Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a 0 2 2 0.6987 0 1 1 1 639.315 1277.62273 1277.62111 1.26 0.00081 0/0 0 0 13114684 HCD 30 MS2 6.580763 637.9 110 46.283 12061 12061 12055 QEplus033719.raw F4 648.3 559.9 738.1 593.3 672.8 614.8 70 3.02 1 FALSE 5.44E-05 0.0024 0.581 -250 47060 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTAEHEAAQQDLQSK [K].rTAEHEAAQQDLQSk.[F] N-Term(TMT6plex); K15(TMT6plex) 33 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 1 3 3 0.7852 0 1 1 1 724.0589 2170.16214 2170.16166 0.22 0.00016 0/0 0 0 4245856.5 HCD 30 MS2 0 145.9 110 46.293 12065 12065 12055 QEplus033719.raw F4 144.8 113 178.4 134.4 142.4 162.5 453 7.59 1 FALSE 1.14E-05 6.31E-16 3.087 -250 47067 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDQAQDVK [R].tDQAQDVk.[K] N-Term(TMT6plex); K8(TMT6plex) 3 Q5EAT0 Signal recognition particle 9 kDa protein OS=Mus musculus OX=10090 GN=Srp9 PE=1 SV=1 Q5EAT0; Q3UIK3; D3YZX8 Signal recognition particle 9 kDa protein OS=Mus musculus OX=10090 GN=Srp9 PE=1 SV=1; Signal recognition particle 9 kDa protein OS=Mus musculus OX=10090 GN=Srp9 PE=2 SV=1; Signal recognition particle 9 kDa protein OS=Mus musculus OX=10090 GN=Srp9 PE=1 SV=1 0 2 2 0.1307 0 1 1 1 681.88574 1362.76421 1362.76292 0.95 0.00065 0/0 0 0 5514948.5 HCD 30 MS2 37.12932 521.4 110 46.3003 12067 12067 12066 QEplus033719.raw F4 643.4 365.4 491.3 584.2 516.2 527.7 482 1.99 1 FALSE 1.14E-05 0.0006504 0.7 -250 47073 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAAPADVGEER [R].aAAPADVGEER.[R] N-Term(TMT6plex) 1 Q8K3A9 7SK snRNA methylphosphate capping enzyme OS=Mus musculus OX=10090 GN=Mepce PE=1 SV=2 Q8K3A9 7SK snRNA methylphosphate capping enzyme OS=Mus musculus OX=10090 GN=Mepce PE=1 SV=2 0 2 2 0.6566 0 1 1 1 657.8468 1314.68633 1314.68511 0.93 0.00061 0/0 0 0 6800458.5 HCD 30 MS2 13.03955 310.2 110 46.3029 12068 12068 12066 QEplus033719.raw F4 310.7 300.4 340.4 244.5 368.4 296.7 175 3.64 1 FALSE 1.14E-05 4.65E-09 1.68 -250 47082 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGEFCHSR [R].vGEFcHSR.[G] N-Term(TMT6plex); C5(Carbamidomethyl) 2 A0A1S6GWH5 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1 A0A1S6GWH5; Q02053 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1; Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus OX=10090 GN=Uba1 PE=1 SV=1 0 3 3 0.7569 0 1 1 1 407.53986 1220.60501 1220.60436 0.54 0.00022 0/0 0 0 37573152 HCD 30 MS2 10.99147 349.3 37.186 46.3051 12069 12069 12066 QEplus033719.raw F4 409.5 290.2 355.8 293.2 417.2 330 104 3.62 1 FALSE 1.14E-05 3.54E-05 0.943 -250 47087 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLQGRDEQSEEK [R].dLQGRDEQSEEk.[K] N-Term(TMT6plex); K12(TMT6plex) 4 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 3 3 0.6272 0 1 1 1 631.33099 1891.97843 1891.97615 1.2 0.00076 0/0 0 0 35277772 HCD 30 MS2 12.10122 847.8 52.081 46.3074 12070 12070 12066 QEplus033719.raw F4 932.8 919.1 969.6 538.6 1028.3 698.4 331 3.38 1 FALSE 1.14E-05 1.68E-07 1.384 -250 47105 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTAEHEAAQQDLQSK [K].rTAEHEAAQQDLQSk.[F] N-Term(TMT6plex); K15(TMT6plex) 33 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 1 4 4 0.6876 0 1 1 1 543.29626 2170.16323 2170.16166 0.72 0.00039 0/0 0 0 12025821 HCD 30 MS2 16.74848 558.7 91.923 46.3119 12072 12072 12066 QEplus033719.raw F4 634.9 445.1 599.1 466.9 587.6 618.8 453 4.93 1 FALSE 1.14E-05 2.41E-10 1.925 -250 47118 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTDNGLQR [R].vTDNGLQR.[V] N-Term(TMT6plex) 2 O08528 Hexokinase-2 OS=Mus musculus OX=10090 GN=Hk2 PE=1 SV=1 O08528; E9Q5B5 Hexokinase-2 OS=Mus musculus OX=10090 GN=Hk2 PE=1 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk2 PE=1 SV=1 0 2 2 0.428 0 1 1 1 566.31921 1131.63115 1131.63195 -0.71 -0.0004 0/0 0 0 13184820 HCD 30 MS2 12.64043 689.1 88.373 46.3167 12074 12074 12066 QEplus033719.raw F4 838.6 480.3 716.2 790.7 551 757.7 395 2.57 1 FALSE 0.0001401 0.003208 0.551 -250 47124 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AREEAERELER [R].aREEAERELER.[W] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 2 3 3 0.4517 0 1 1 1 539.6239 1616.85715 1616.85536 1.11 0.0006 0/0 0 0 13061329 HCD 30 MS2 7.375279 592 110 46.3192 12075 12075 12066 QEplus033719.raw F4 670.2 452.5 614.3 476 688.2 651 296 3.21 2 FALSE 1.14E-05 0.0006446 0.7 -250 47130 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ACGLPSGSCR [R].acGLPSGScR.[D] N-Term(TMT6plex); C2(Carbamidomethyl); C9(Carbamidomethyl) 2 A0A0R4J139 Peptide-methionine (R)-S-oxide reductase OS=Mus musculus OX=10090 GN=Msrb3 PE=1 SV=1 A0A0R4J139; Q8BU85 "Peptide-methionine (R)-S-oxide reductase OS=Mus musculus OX=10090 GN=Msrb3 PE=1 SV=1; Methionine-R-sulfoxide reductase B3, mitochondrial OS=Mus musculus OX=10090 GN=Msrb3 PE=1 SV=2" 0 2 2 0.5305 0 1 1 1 647.3161 1293.62493 1293.62411 0.63 0.00041 0/0 0 0 12187013 HCD 30 MS2 48.95477 720.4 110 46.3217 12076 12076 12066 QEplus033719.raw F4 732.7 715.1 791.3 427.4 972 683.8 79 3.28 1 FALSE 1.14E-05 6.94E-07 1.267 -250 47135 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEGEGDSEEVK [R].nEGEGDSEEVk.[A] N-Term(TMT6plex); K11(TMT6plex) 1 Q80W54 CAAX prenyl protease 1 homolog OS=Mus musculus OX=10090 GN=Zmpste24 PE=1 SV=2 Q80W54 CAAX prenyl protease 1 homolog OS=Mus musculus OX=10090 GN=Zmpste24 PE=1 SV=2 0 2 2 0.7617 0 1 1 1 825.91534 1650.82341 1650.82228 0.69 0.00057 0/0 0 0 13472323 HCD 30 MS2 4.357592 509.5 110 46.3315 12079 12079 12077 QEplus033719.raw F4 453 504.9 574.3 430 572.2 522.4 154 4.28 1 FALSE 1.14E-05 6.46E-10 1.843 -250 47139 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRPGLPGAAGAR [R].gRPGLPGAAGAR.[G] N-Term(TMT6plex) 8 Q7TT32; P04258 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1;SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain" Q8BKY2; Q7TT32; Q5DTG2; P04258; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 3 3 0.6121 0 1 1 1 436.92841 1308.77066 1308.76978 0.67 0.00029 0/0 0 0 152294656 HCD 30 MS2 50.21599 483.5 4.877 46.3338 12080 12080 12077 QEplus033719.raw F4 460.6 456.6 574.9 333.6 500.9 574.1 396 3.79 2 TRUE 1.14E-05 8.73E-05 0.868 -250 47146 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLRPQGK [R].tLRPQGk.[G] N-Term(TMT6plex); K7(TMT6plex) 1 Q8C3X8 Lipase maturation factor 2 OS=Mus musculus OX=10090 GN=Lmf2 PE=1 SV=1 Q8C3X8 Lipase maturation factor 2 OS=Mus musculus OX=10090 GN=Lmf2 PE=1 SV=1 0 3 3 0.3972 0 1 1 1 419.94 1257.80545 1257.80433 0.9 0.00038 0/0 0 0 24828816 HCD 30 MS2 21.64014 821 49.56 46.336 12081 12081 12077 QEplus033719.raw F4 1021.3 617.6 874 779.5 906.6 726.8 217 2.14 1 FALSE 0.004038 0.07479 0.075 -250 47153 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VENDHGVAK [K].vENDHGVAk.[A] N-Term(TMT6plex); K9(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.5094 0 1 1 1 476.27396 1426.80732 1426.80545 1.31 0.00062 0/0 0 0 14843967 HCD 30 MS2 46.94577 802.2 64.55 46.3383 12082 12082 12077 QEplus033719.raw F4 1044.5 435.6 668.1 1197.6 562.3 905.1 364 3.2 2 FALSE 1.14E-05 3.81E-05 0.937 -250 47158 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AREEAERELER [R].aREEAERELER.[W] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 2 4 4 0.5085 0 1 1 1 404.96924 1616.85512 1616.85536 -0.15 -0.00006 0/0 0 0 13175240 HCD 30 MS2 39.57893 759.2 105.751 46.3407 12083 12083 12077 QEplus033719.raw F4 849.4 539.3 787.3 609.1 960.1 809.8 288 4.13 2 FALSE 5.44E-05 0.002075 0.595 -250 47165 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEGEAFAR [KR].eEGEAFAR.[E] N-Term(TMT6plex) 7 P53994 Ras-related protein Rab-2A OS=Mus musculus OX=10090 GN=Rab2a PE=1 SV=1 Q6PDZ3; Q8BXY4; P53994; Q6P7T7; P59279; Q5U628; Q3TEG7 "RAB2A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab2a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab2a PE=2 SV=1; Ras-related protein Rab-2A OS=Mus musculus OX=10090 GN=Rab2a PE=1 SV=1; Rab2b protein OS=Mus musculus OX=10090 GN=Rab2b PE=2 SV=1; Ras-related protein Rab-2B OS=Mus musculus OX=10090 GN=Rab2b PE=1 SV=1; RAB2B, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab2b PE=2 SV=1; Ras-related protein Rab-2B OS=Mus musculus OX=10090 GN=Rab2b PE=1 SV=1" 0 2 2 0.5979 0 1 1 1 569.29169 1137.5761 1137.57377 2.05 0.00116 0/0 0 0 8374967 HCD 30 MS2 9.408089 573.5 110 46.3432 12084 12084 12077 QEplus033719.raw F4 606.9 467.5 626.6 443.4 654.1 642.8 111 2.91 1 FALSE 1.14E-05 0.0008241 0.679 -250 47177 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGEGVQNQAK [K].kGEGVQNQAk.[K] N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex) 5 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5-4; Q99PL5; Q99PL5-3; Q99PL5-2 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Isoform RRp41 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; Isoform RRp47 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp61 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 1 3 3 0.6628 0 1 1 1 582.68701 1746.04648 1746.04769 -0.69 -0.0004 0/0 0 0 5385592.5 HCD 30 MS2 18.30071 581.8 110 46.3482 12086 12086 12077 QEplus033719.raw F4 998 378.6 640.2 490.1 387.5 596.3 389 4.27 1 FALSE 1.14E-05 2.54E-09 1.73 -250 47207 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IREEYPDR [K].iREEYPDR.[I] N-Term(TMT6plex) 11 Q7TMM9; P99024; P68372; Q9CWF2; Q3UMM1 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1;Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=1 SV=1 Q7TMM9; Q9CVR0; ENSEMBL:ENSBTAP00000025008; A2AQ07; Q3U9U3; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2; Q3UMM1 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; (Bos taurus) hypothetical protein; Tubulin beta-1 chain OS=Mus musculus OX=10090 GN=Tubb1 PE=1 SV=1; Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1; Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=1 SV=1 1 3 3 0.5769 0 1 1 1 436.2373 1306.69736 1306.69528 1.59 0.00069 0/0 0 0 174516560 HCD 30 MS2 34.57826 480.3 6.583 46.3625 12091 12091 12088 QEplus033719.raw F4 466 457.2 545.6 375 531.4 506.4 290 3.38 5 TRUE 0.0001187 0.003153 0.553 -250 47210 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RATVVESSEK [K].rATVVESSEk.[A] N-Term(TMT6plex); K10(TMT6plex) 1 A8IP69 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 A8IP69 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 1 3 3 0.6751 0 1 1 1 521.97583 1563.91294 1563.91064 1.47 0.00077 0/0 0 0 137798480 HCD 30 MS2 4.772697 543.1 12.62 46.3648 12092 12092 12088 QEplus033719.raw F4 590.6 394.3 513.3 574.2 574.6 611.8 437 5.11 1 FALSE 1.14E-05 1.53E-11 2.152 -250 47217 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MKQEPVR [RK].mkQEPVR.[TS] N-Term(TMT6plex); K2(TMT6plex) 3 Q62159; P62746 Rho-related GTP-binding protein RhoC OS=Mus musculus OX=10090 GN=Rhoc PE=1 SV=2;Rho-related GTP-binding protein RhoB OS=Mus musculus OX=10090 GN=Rhob PE=1 SV=1 Q3TIC2; Q62159; P62746 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rhob PE=2 SV=1; Rho-related GTP-binding protein RhoC OS=Mus musculus OX=10090 GN=Rhoc PE=1 SV=2; Rho-related GTP-binding protein RhoB OS=Mus musculus OX=10090 GN=Rhob PE=1 SV=1 1 3 3 0.3622 0 1 1 1 449.27332 1345.80539 1345.80261 2.07 0.00093 0/0 0 0 54860688 HCD 30 MS2 26.36885 659.4 16.175 46.367 12093 12093 12088 QEplus033719.raw F4 633.9 575.8 706.8 571.2 843.6 625.2 447 1.85 2 FALSE 0.005048 0.08722 0.042 -250 47224 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNSSFMSR [K].sNSSFMSR.[E] N-Term(TMT6plex) 1 Q3U7R1 Extended synaptotagmin-1 OS=Mus musculus OX=10090 GN=Esyt1 PE=1 SV=2 Q3U7R1 Extended synaptotagmin-1 OS=Mus musculus OX=10090 GN=Esyt1 PE=1 SV=2 0 2 2 0.7293 0 1 1 1 572.78528 1144.56328 1144.56182 1.27 0.00073 0/0 0 0 27484046 HCD 30 MS2 36.53821 951.1 63.369 46.3693 12094 12094 12088 QEplus033719.raw F4 943.9 897.1 1045.9 763.5 1092.2 963.9 56 2.66 1 FALSE 0.0001187 0.003181 0.552 -250 47235 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRGETENEEFEK [R].rRGETENEEFEk.[L] N-Term(TMT6plex); K12(TMT6plex) 11 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; F6RGN9; Q3UGC3; E9QA15; F6ZAW1; E9Q0M9; D3Z6I7; S4R1T7; F6T2Z7; E9QA16; F6QLP8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 2 3 3 0.5797 0 1 1 1 661.35236 1982.04251 1982.03434 4.13 0.00273 0/0 0 0 12937997 HCD 30 MS2 9.451982 510.2 110 46.3741 12096 12096 12088 QEplus033719.raw F4 493.3 534.8 647.7 320 591.9 473.6 369 2.76 1 FALSE 1.14E-05 6.97E-09 1.647 -250 47251 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NWAAQEGNR [R].nWAAQEGNR.[A] N-Term(TMT6plex) 3 Q9CVM2 Death domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Nradd PE=2 SV=1 Q9CVM2; Q8CJ26; A0A0G2JH13 Death domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Nradd PE=2 SV=1; Death domain-containing membrane protein NRADD OS=Mus musculus OX=10090 GN=Nradd PE=1 SV=1; Death domain-containing membrane protein NRADD (Fragment) OS=Mus musculus OX=10090 GN=Nradd PE=1 SV=1 0 2 2 0.6265 0 1 1 1 637.82697 1274.64665 1274.64391 2.15 0.00137 0/0 0 0 10180990 HCD 30 MS2 7.007447 673.5 110 46.3791 12098 12098 12088 QEplus033719.raw F4 650.2 686.8 756.7 478.5 805.8 663.1 128 3.24 1 FALSE 1.14E-05 3.66E-05 0.94 -250 47257 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLQGRDEQSEEK [R].dLQGRDEQSEEk.[K] N-Term(TMT6plex); K12(TMT6plex) 4 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 2 2 0.5336 0 1 1 1 946.49213 1891.97698 1891.97615 0.43 0.00041 0/0 0 0 9346877 HCD 30 MS2 0 326.7 110 46.3864 12100 12100 12099 QEplus033719.raw F4 331.9 349.6 369.9 210.3 423.6 275 327 2.83 1 FALSE 1.14E-05 2.24E-09 1.741 -250 47263 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDREPADPATK [R].eDREPADPATk.[G] N-Term(TMT6plex); K11(TMT6plex) 2 P70227 "Inositol 1,4,5-trisphosphate receptor type 3 OS=Mus musculus OX=10090 GN=Itpr3 PE=1 SV=3" Q0IJ80; P70227 "Itpr3 protein (Fragment) OS=Mus musculus OX=10090 GN=Itpr3 PE=2 SV=1; Inositol 1,4,5-trisphosphate receptor type 3 OS=Mus musculus OX=10090 GN=Itpr3 PE=1 SV=3" 1 3 3 0.5194 0 1 1 1 562.97418 1686.90799 1686.90628 1.01 0.00057 0/0 0 0 7753782 HCD 30 MS2 0 531.7 110 46.3889 12101 12101 12099 QEplus033719.raw F4 556.6 469.3 635.3 473.8 495 560.5 340 3.35 1 FALSE 1.14E-05 4.36E-08 1.496 -250 47269 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAPLVH [K].qAPLVH.[-] N-Term(TMT6plex) 7 Q6PFA2 Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1 Q6PFA2; O08585; B1AWD9; B1AWD8; B1AWE0; Q3THU7; B1AWE1 Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain A OS=Mus musculus OX=10090 GN=Clta PE=1 SV=2; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=2 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1 0 2 2 0.7654 0 1 1 1 447.27417 893.54106 893.54062 0.5 0.00022 0/0 0 0 123630592 HCD 30 MS2 10.98931 283.4 10.02 46.3912 12102 12102 12099 QEplus033719.raw F4 278.1 232.1 323 230 305.6 331.5 27 2.43 1 FALSE 0.004081 0.07529 0.074 -250 47279 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDAIPGR [K].tDAIPGR.[L] N-Term(TMT6plex) 8 A0A023J6F3 Cytochrome c oxidase subunit 2 OS=Mus musculus musculus OX=39442 GN=COX2 PE=3 SV=1 A0A023J6I7; A0A023J6F3; A0A075DC90; A3R481; A0A023J5Y1; K7XK22; A3E4B0; K7XKA7 Cytochrome c oxidase subunit 2 OS=Mus musculus castaneus OX=10091 GN=COX2 PE=3 SV=1; Cytochrome c oxidase subunit 2 OS=Mus musculus musculus OX=39442 GN=COX2 PE=3 SV=1; Cytochrome c oxidase subunit 2 OS=Mus musculus OX=10090 GN=COX2 PE=3 SV=1; Cytochrome c oxidase subunit 2 OS=Mus musculus domesticus OX=10092 GN=COXII PE=3 SV=1; Cytochrome c oxidase subunit 2 OS=Mus musculus musculus OX=39442 GN=COX2 PE=3 SV=1; Cytochrome c oxidase subunit 2 OS=Mus musculus domesticus OX=10092 GN=COXII PE=3 SV=1; Cytochrome c oxidase subunit 2 OS=Mus musculus musculus OX=39442 GN=COX2 PE=3 SV=1; Cytochrome c oxidase subunit 2 OS=Mus musculus domesticus OX=10092 GN=COXII PE=3 SV=1 0 2 2 0.44 0 1 1 1 479.77994 958.5526 958.55191 0.72 0.00034 0/0 0 0 94044856 HCD 30 MS2 10.02188 642.1 15.274 46.3934 12103 12103 12099 QEplus033719.raw F4 610.8 492.4 719.8 720.2 536.8 772.7 225 2.25 1 FALSE 0.0007816 0.01087 0.391 -250 47282 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRGETENEEFEK [R].rRGETENEEFEk.[L] N-Term(TMT6plex); K12(TMT6plex) 11 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; F6RGN9; Q3UGC3; E9QA15; F6ZAW1; E9Q0M9; D3Z6I7; S4R1T7; F6T2Z7; E9QA16; F6QLP8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 2 4 4 0.5506 0 1 1 1 496.26462 1982.03664 1982.03434 1.16 0.00058 0/0 0 0 64637844 HCD 30 MS2 27.37132 536.1 19.801 46.3957 12104 12104 12099 QEplus033719.raw F4 557.8 529.6 624.9 313.7 609.4 580.9 342 3.16 1 FALSE 1.14E-05 0.0007558 0.687 -250 47288 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IREEYPDR [K].iREEYPDR.[I] N-Term(TMT6plex) 11 Q7TMM9; P99024; P68372; Q9CWF2; Q3UMM1 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1;Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=1 SV=1 Q7TMM9; Q9CVR0; ENSEMBL:ENSBTAP00000025008; A2AQ07; Q3U9U3; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2; Q3UMM1 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; (Bos taurus) hypothetical protein; Tubulin beta-1 chain OS=Mus musculus OX=10090 GN=Tubb1 PE=1 SV=1; Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1; Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=1 SV=1 1 2 2 0.5714 0 1 1 1 653.85181 1306.69634 1306.69528 0.81 0.00053 0/0 0 0 30261668 HCD 30 MS2 2.946435 374 72.556 46.398 12105 12105 12099 QEplus033719.raw F4 381.9 359 409.5 315.8 434.6 343 280 2.94 5 TRUE 0.0002019 0.004112 0.524 -250 47291 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAHTMDPQLR [K].qAHTMDPQLR.[L] N-Term(TMT6plex) 4 Q3UHT6 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1 Q3UHT6; P19096; Q3TB22; A0A0U1RNJ1 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2; Fatty acid synthase (Fragment) OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=1 0 3 3 0.6785 0 1 1 1 475.92062 1425.74732 1425.747 0.22 0.00011 0/0 0 0 23506290 HCD 30 MS2 39.82106 583.2 52.223 46.4002 12106 12106 12099 QEplus033719.raw F4 699.9 366.8 548.7 731.1 487.3 665.4 243 3.67 1 FALSE 1.14E-05 4.96E-07 1.295 -250 47300 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGEFCHSR [R].vGEFcHSR.[G] N-Term(TMT6plex); C5(Carbamidomethyl) 2 A0A1S6GWH5 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1 A0A1S6GWH5; Q02053 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1; Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus OX=10090 GN=Uba1 PE=1 SV=1 0 2 2 0.6292 0 1 1 1 610.8064 1220.60552 1220.60436 0.95 0.00058 0/0 0 0 22593558 HCD 30 MS2 10.8515 746.4 74.937 46.4025 12107 12107 12099 QEplus033719.raw F4 827.4 605.1 805 627.9 821.1 791.9 101 2.67 1 FALSE 7.59E-05 0.00278 0.566 -250 47306 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRDWSTR [K].vRDWSTR.[K] N-Term(TMT6plex) 2 O55222 Integrin-linked protein kinase OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2 O55222; D3YZA5 Integrin-linked protein kinase OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2; Integrin-linked protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2 1 3 3 0.2107 0 1 1 1 383.5509 1148.63816 1148.63737 0.68 0.00026 0/0 0 0 22041232 HCD 30 MS2 6.759785 473.5 61.819 46.4048 12108 12108 12099 QEplus033719.raw F4 486.5 413.2 529.8 370.8 522 518.9 284 2.8 1 FALSE 0.001506 0.02259 0.261 -250 47315 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVEMHNK [R].tVEMHNk.[I] N-Term(TMT6plex); K7(TMT6plex) 9 G3UVV4 Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1 Q3UE51; Q3TTB4; G3UVV4; Q3TJE3; P17710; P17710-2; P17710-4; Q6GQU1; Q3UPC4 Hexokinase (Fragment) OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase (Fragment) OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=3; Isoform HK1-SB of Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1; Isoform HK1-SC of Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1 0 3 3 0.5 0 1 1 1 439.58453 1316.73905 1316.73968 -0.48 -0.00021 0/0 0 0 16568188 HCD 30 MS2 68.17497 968.4 72.423 46.407 12109 12109 12099 QEplus033719.raw F4 1361.3 602.4 987.9 866.9 868.5 1123.5 349 3 1 FALSE 0.0002419 0.004946 0.503 -250 47322 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAGVAIGR [K].qAGVAIGR.[L] N-Term(TMT6plex) 1 P83870 PHD finger-like domain-containing protein 5A OS=Mus musculus OX=10090 GN=Phf5a PE=1 SV=1 P83870 PHD finger-like domain-containing protein 5A OS=Mus musculus OX=10090 GN=Phf5a PE=1 SV=1 0 2 2 0.3074 0 1 1 1 500.81003 1000.61278 1000.61009 2.68 0.00134 0/0 0 0 27667470 HCD 30 MS2 11.63937 611.4 39.024 46.4143 12111 12111 12110 QEplus033719.raw F4 601.5 565 694.5 434.4 740.6 632.3 163 2.57 1 FALSE 1.14E-05 0.0001612 0.817 -250 47327 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RATVVESSEK [K].rATVVESSEk.[A] N-Term(TMT6plex); K10(TMT6plex) 1 A8IP69 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 A8IP69 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 1 2 2 0.5972 0 1 1 1 782.46014 1563.91301 1563.91064 1.52 0.00118 0/0 0 0 19891208 HCD 30 MS2 5.348397 442.7 110 46.4168 12112 12112 12110 QEplus033719.raw F4 478.2 308.9 438.3 479.2 465.2 486.6 439 2.88 1 FALSE 1.14E-05 7.27E-05 0.883 -250 47343 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDPSVRPMQER [K].tDPSVRPMQER.[V] N-Term(TMT6plex) 2 Q9CRD0 OCIA domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ociad1 PE=1 SV=1 A0A0J9YUB6; Q9CRD0 OCIA domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ociad1 PE=1 SV=1; OCIA domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ociad1 PE=1 SV=1 0 3 3 0.5135 0 1 1 1 515.60748 1544.8079 1544.80524 1.72 0.00088 0/0 0 0 29577030 HCD 30 MS2 51.15973 760.2 71.226 46.4214 12114 12114 12110 QEplus033719.raw F4 778.4 614.4 865.8 667.6 739 896 260 2.22 1 FALSE 1.14E-05 0.0007692 0.685 -250 47383 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVQCLSR [R].tVQcLSR.[E] N-Term(TMT6plex); C4(Carbamidomethyl) 3 Q3UGC8 Propanoyl-CoA:carbon dioxide ligase subunit alpha OS=Mus musculus OX=10090 GN=Pcca PE=1 SV=1 Q3UGC8; H3BJR0; H3BK61 "Propanoyl-CoA:carbon dioxide ligase subunit alpha OS=Mus musculus OX=10090 GN=Pcca PE=1 SV=1; Propionyl-CoA carboxylase alpha chain, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Pcca PE=1 SV=1; Propionyl-CoA carboxylase alpha chain, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Pcca PE=1 SV=1" 0 2 2 0.5 0 1 1 1 546.80634 1092.60539 1092.60329 1.92 0.00105 0/0 0 0 8837730 HCD 30 MS2 58.54805 934.7 110 46.4331 12119 12119 12110 QEplus033719.raw F4 1090.7 743.7 1025.9 752.4 1049.1 946.5 197 2.04 1 FALSE 0.001169 0.01571 0.324 -250 47389 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MFGGSGTSSRPSSNR [R].mFGGSGTSSRPSSNR.[S] N-Term(TMT6plex) 8 Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; A2AKJ2; Q3U6S1; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 3 3 0.7374 0 1 1 1 586.29248 1756.86289 1756.8598 1.76 0.00103 0/0 0 0 6055137.5 HCD 30 MS2 0 316.4 110 46.4356 12120 12120 12110 QEplus033719.raw F4 311.2 319.7 349 239 383.3 295.9 146 3.77 1 FALSE 1.14E-05 3.80E-09 1.697 -250 47396 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAQAAAAMSR [R].tAQAAAAMSR.[G] N-Term(TMT6plex) 4 Q80UL3 Galactokinase 1 OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1 Q80UL3; Q9R0N0; Q9CXZ9; Q9CWW5 Galactokinase 1 OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1; Galactokinase OS=Mus musculus OX=10090 GN=Galk1 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1 0 2 2 0.5656 0 1 1 1 603.8291 1206.65093 1206.64622 3.9 0.00235 0/0 0 0 44723108 HCD 30 MS2 7.131297 489.2 21.438 46.4429 12122 12122 12121 QEplus033719.raw F4 505.3 427.6 554.7 449.5 471.2 526.8 265 3.43 1 FALSE 1.14E-05 5.33E-07 1.289 -250 47403 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YCYGPQGSR [K].ycYGPQGSR.[S] N-Term(TMT6plex); C2(Carbamidomethyl) 1 O35465-2 Isoform 2 of Peptidyl-prolyl cis-trans isomerase FKBP8 OS=Mus musculus OX=10090 GN=Fkbp8 O35465-2 Isoform 2 of Peptidyl-prolyl cis-trans isomerase FKBP8 OS=Mus musculus OX=10090 GN=Fkbp8 0 2 2 0.5548 0 1 1 1 658.81604 1316.6248 1316.62549 -0.52 -0.00034 0/0 0 0 4575777.5 HCD 30 MS2 15.16921 372.4 110 46.4455 12123 12123 12121 QEplus033719.raw F4 371.8 341.8 431.1 363.6 375.9 350.4 37 3.1 1 FALSE 1.14E-05 0.0008982 0.672 -250 47410 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSVSGR [R].lSVSGR.[D] N-Term(TMT6plex) 3 A1A4T2 Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1 A1A4T2; Q3UE86; Q8BHN3 Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Gal_mutarotas_2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab PE=1 SV=1 0 2 2 0.175 0 1 1 1 424.26413 847.52098 847.51988 1.3 0.00055 0/0 0 0 58857764 HCD 30 MS2 31.68341 680.4 19.174 46.4477 12124 12124 12121 QEplus033719.raw F4 597.1 612.9 798.3 532.7 687.1 854.6 49 2 1 FALSE 0.004624 0.08198 0.056 -250 47420 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTIEGLR [K].rTIEGLR.[G] N-Term(TMT6plex) 7 E9Q586 Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1 E9Q3M3; E9Q586; D3YX34; Q3T9V8; O08788; Q6NZM3; Q3TB96 Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=3; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1 1 3 3 0.3508 0 1 1 1 358.55927 1073.66324 1073.66286 0.36 0.00013 0/0 0 0 21615026 HCD 30 MS2 31.19952 427.5 51.302 46.45 12125 12125 12121 QEplus033719.raw F4 574.2 292.7 431.4 370.1 448.9 447.9 149 3.05 1 FALSE 0.001074 0.01393 0.346 -250 47426 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGESSLR [K].mGESSLR.[N] N-Term(TMT6plex) 5 Q91ZW3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Mus musculus OX=10090 GN=Smarca5 PE=1 SV=1 Q6PGB8; F6Z6F4; Q91ZW3; Q05DE7; Q6PGB8-2 Probable global transcription activator SNF2L1 OS=Mus musculus OX=10090 GN=Smarca1 PE=1 SV=1; Probable global transcription activator SNF2L1 (Fragment) OS=Mus musculus OX=10090 GN=Smarca1 PE=1 SV=1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Mus musculus OX=10090 GN=Smarca5 PE=1 SV=1; Smarca1 protein (Fragment) OS=Mus musculus OX=10090 GN=Smarca1 PE=2 SV=1; Isoform 2 of Probable global transcription activator SNF2L1 OS=Mus musculus OX=10090 GN=Smarca1 0 2 2 0.3641 0 1 1 1 504.77145 1008.53563 1008.53455 1.08 0.00054 0/0 0 0 17436846 HCD 30 MS2 41.00798 984.9 94.578 46.4522 12126 12126 12121 QEplus033719.raw F4 1039.4 855.9 1054.6 712.6 1184.4 1062.5 175 1.95 1 FALSE 0.001473 0.02131 0.27 -250 47461 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPGPLQER [R].gPGPLQER.[S] N-Term(TMT6plex) 8 Q6ZQ61 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1 Q6ZQ61; Q4FJT0; A0A494BAZ2; Q3TTX0; Q9R0U5; A0A494BAC5; Q3TZN1; Q5BL18 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matr3 protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin-3 (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin3 OS=Mus musculus OX=10090 PE=4 SV=1; Matrin-3 (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin 3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1 0 2 2 0.3992 0 1 1 1 541.81195 1082.61662 1082.61557 0.97 0.00053 0/0 0 0 21851154 HCD 30 MS2 20.8714 1221 110 46.4645 12131 12131 12121 QEplus033719.raw F4 1363 1085.3 1313.9 883.4 1417.8 1262.3 132 2.43 1 FALSE 0.0006294 0.009556 0.412 -250 47471 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEGEGDSEEVK [R].nEGEGDSEEVk.[A] N-Term(TMT6plex); K11(TMT6plex) 1 Q80W54 CAAX prenyl protease 1 homolog OS=Mus musculus OX=10090 GN=Zmpste24 PE=1 SV=2 Q80W54 CAAX prenyl protease 1 homolog OS=Mus musculus OX=10090 GN=Zmpste24 PE=1 SV=2 0 3 3 0.732 0 1 1 1 550.94598 1650.8234 1650.82228 0.68 0.00037 0/0 0 0 9175910 HCD 30 MS2 0 454.7 110 46.4718 12133 12133 12132 QEplus033719.raw F4 429.3 393.9 514.5 368.5 533.8 488.3 154 4.59 1 FALSE 1.14E-05 2.06E-07 1.368 -250 47483 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGHDILVR [R].gGHDILVR.[S] N-Term(TMT6plex) 1 Q9QZE5 Coatomer subunit gamma-1 OS=Mus musculus OX=10090 GN=Copg1 PE=1 SV=1 Q9QZE5 Coatomer subunit gamma-1 OS=Mus musculus OX=10090 GN=Copg1 PE=1 SV=1 0 3 3 0.2526 0 1 1 1 365.88745 1095.6478 1095.64721 0.54 0.0002 0/0 0 0 22470882 HCD 30 MS2 53.77776 261.7 30.827 46.4811 12137 12137 12132 QEplus033719.raw F4 241.3 230.7 292.4 222.4 330.4 253.1 104 2.85 1 FALSE 0.000262 0.005281 0.495 -250 47492 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLVTSCR [R].tLVTScR.[R] N-Term(TMT6plex); C6(Carbamidomethyl) 2 Q6P549 "Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Mus musculus OX=10090 GN=Inppl1 PE=1 SV=1" A0A087WPT7; Q6P549 "Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Inppl1 PE=1 SV=1; Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Mus musculus OX=10090 GN=Inppl1 PE=1 SV=1" 0 2 2 0.4156 0 1 1 1 533.30048 1065.59368 1065.5924 1.2 0.00064 0/0 0 0 16496814 HCD 30 MS2 36.47792 765.5 97.02 46.4833 12138 12138 12132 QEplus033719.raw F4 829.1 551.7 889 722 620.1 980.9 207 2.43 1 FALSE 0.0008718 0.01194 0.374 -250 47501 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIADHIR [K].aIADHIR.[D] N-Term(TMT6plex) 2 P14152 "Malate dehydrogenase, cytoplasmic OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=3" P14152; A0A5F8MPN8 "Malate dehydrogenase, cytoplasmic OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=3; Malate dehydrogenase OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=1" 0 2 2 0.3589 0 1 1 1 512.80994 1024.6126 1024.61009 2.44 0.00125 0/0 0 0 11015252 HCD 30 MS2 41.18212 1037.5 110 46.4858 12139 12139 12132 QEplus033719.raw F4 1055.6 774.6 1088.3 1012.1 977 1317.5 140 2.48 1 FALSE 0.001912 0.03267 0.204 -250 47508 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNHLAIER [K].dNHLAIER.[K] N-Term(TMT6plex) 6 A2AUK8 Band 4.1-like protein 1 OS=Mus musculus OX=10090 GN=Epb41l1 PE=1 SV=1 Q9Z2H5-2; A2AUK5; E9PV14; B6ZHC9; A2AUK8; Q9Z2H5 Isoform 2 of Band 4.1-like protein 1 OS=Mus musculus OX=10090 GN=Epb41l1; Band 4.1-like protein 1 OS=Mus musculus OX=10090 GN=Epb41l1 PE=1 SV=1; Band 4.1-like protein 1 OS=Mus musculus OX=10090 GN=Epb41l1 PE=1 SV=2; Erythrocyte protein band 4.1-like 1 OS=Mus musculus OX=10090 GN=Epb41l1 PE=2 SV=1; Band 4.1-like protein 1 OS=Mus musculus OX=10090 GN=Epb41l1 PE=1 SV=1; Band 4.1-like protein 1 OS=Mus musculus OX=10090 GN=Epb41l1 PE=1 SV=2 0 2 2 0.4737 0 1 1 1 598.8313 1196.65532 1196.6585 -2.66 -0.00159 0/0 0 0 2385379 HCD 30 MS2 0 255.6 110 46.4883 12140 12140 12132 QEplus033719.raw F4 258.5 237.8 280.5 236.5 273.5 246.9 226 2.85 1 FALSE 1.14E-05 0.0001616 0.817 -250 47546 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLFENSR [K].hLFENSR.[L] N-Term(TMT6plex) 4 Q9D5T0 Outer mitochondrial transmembrane helix translocase OS=Mus musculus OX=10090 GN=Atad1 PE=1 SV=1 Q9D5T0; A0A494B9L7; A0A494B9Y0; A0A494BAB5 Outer mitochondrial transmembrane helix translocase OS=Mus musculus OX=10090 GN=Atad1 PE=1 SV=1; Outer mitochondrial transmembrane helix translocase OS=Mus musculus OX=10090 GN=Atad1 PE=1 SV=1; Outer mitochondrial transmembrane helix translocase OS=Mus musculus OX=10090 GN=Atad1 PE=1 SV=1; Outer mitochondrial transmembrane helix translocase OS=Mus musculus OX=10090 GN=Atad1 PE=1 SV=1 0 3 3 0.5902 0 1 1 1 377.87515 1131.6109 1131.61082 0.07 0.00003 0/0 0 0 15108574 HCD 30 MS2 47.95122 401.9 78.698 46.5074 12147 12147 12143 QEplus033719.raw F4 566.2 235.6 416.8 397.6 356.4 438.8 285 2.44 1 FALSE 0.001607 0.02582 0.239 -250 47564 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNHLAIER [K].dNHLAIER.[K] N-Term(TMT6plex) 6 A2AUK8 Band 4.1-like protein 1 OS=Mus musculus OX=10090 GN=Epb41l1 PE=1 SV=1 Q9Z2H5-2; A2AUK5; E9PV14; B6ZHC9; A2AUK8; Q9Z2H5 Isoform 2 of Band 4.1-like protein 1 OS=Mus musculus OX=10090 GN=Epb41l1; Band 4.1-like protein 1 OS=Mus musculus OX=10090 GN=Epb41l1 PE=1 SV=1; Band 4.1-like protein 1 OS=Mus musculus OX=10090 GN=Epb41l1 PE=1 SV=2; Erythrocyte protein band 4.1-like 1 OS=Mus musculus OX=10090 GN=Epb41l1 PE=2 SV=1; Band 4.1-like protein 1 OS=Mus musculus OX=10090 GN=Epb41l1 PE=1 SV=1; Band 4.1-like protein 1 OS=Mus musculus OX=10090 GN=Epb41l1 PE=1 SV=2 0 3 3 0.6472 0 1 1 1 399.55792 1196.65921 1196.6585 0.6 0.00024 0/0 0 0 9438932 HCD 30 MS2 7.824558 459.6 110 46.5124 12149 12149 12143 QEplus033719.raw F4 478.9 407.6 533 353.6 465.7 518.8 273 3.09 1 FALSE 4.43E-05 0.001636 0.617 -250 47573 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGGSLPPQAR [K].eGGSLPPQAR.[S] N-Term(TMT6plex) 3 E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.4043 0 1 1 1 620.84692 1240.68657 1240.68472 1.5 0.00093 0/0 0 0 7466833.5 HCD 30 MS2 8.2586 514.7 110 46.5149 12150 12150 12143 QEplus033719.raw F4 529.2 437 626.5 455.3 466.6 573.5 256 2.35 1 FALSE 1.14E-05 0.0002657 0.776 -250 47587 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REEGGTYWSR [K].rEEGGTYWSR.[V] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 1 3 3 0.5193 0 1 1 1 490.58344 1469.73575 1469.73346 1.56 0.00077 0/0 0 0 4630409.5 HCD 30 MS2 10.5339 386.9 110 46.5196 12152 12152 12143 QEplus033719.raw F4 433.1 224.4 340.1 390.1 446.9 487 133 4.93 2 FALSE 1.14E-05 2.22E-05 0.982 -250 47595 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLEEEEQRR [K].vLEEEEQRR.[K] N-Term(TMT6plex) 9 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; Q3UGC3; E9QA15; F6ZAW1; E9Q0M9; D3Z6I7; S4R1T7; E9QA16; F6QLP8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 1 2 2 0.5359 0 1 1 1 708.88495 1416.76262 1416.76442 -1.27 -0.0009 0/0 0 0 2955315.5 HCD 30 MS2 0 116.5 110 46.5222 12153 12153 12143 QEplus033719.raw F4 129 111.1 101.7 89.5 152.4 115.2 316 3.06 1 FALSE 1.14E-05 0.0004932 0.723 -250 47602 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGIPPDQQR [K].eGIPPDQQR.[LV] N-Term(TMT6plex) 18 P62984; P62983 Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2;Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2 E9Q5F6; P62984; Q922Z8; Q922B0; Q3TH47; Q5SX22; E9Q4P0; P62983; Q78XY9; E9Q9J0; Q8R0Z9; B0LAC2; Q8C2K3; Q8VC46; A5JUZ1; A0A0A6YW67; E9QNP0; P0CG50 Polyubiquitin-C (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=1; Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Polyubiquitin-B (Fragment) OS=Mus musculus OX=10090 GN=Ubb PE=4 SV=2; KxDL motif-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2; Ubiquitin B OS=Mus musculus OX=10090 GN=Ubb PE=2 SV=1; 60S ribosomal protein L40 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=3 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiquitin A-52 residue ribosomal protein fusion product 1 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubb-ps PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiqutin subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Predicted pseudogene 8797 OS=Mus musculus OX=10090 GN=Gm8797 PE=4 SV=1; 60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Polyubiquitin-C OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=2 0 2 2 0.6532 0 1 1 1 634.84351 1268.67974 1268.67963 0.08 0.00005 0/0 0 0 20554152 HCD 30 MS2 34.57895 787 81.259 46.5295 12155 12155 12154 QEplus033719.raw F4 771.7 629.8 887.2 799.9 742.6 890.9 285 2.97 2 FALSE 1.14E-05 0.000308 0.763 -250 47625 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDFTEER [R].dDFTEER.[L] N-Term(TMT6plex) 4 Q9CQA3 "Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Mus musculus OX=10090 GN=Sdhb PE=1 SV=1" Q9CQA3; Q0QEZ4; Q9Z1Z5; Q3TE45 "Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Mus musculus OX=10090 GN=Sdhb PE=1 SV=1; Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Sdhb PE=2 SV=1; Succinate dehydrogenase Ip subunit (Fragment) OS=Mus musculus OX=10090 GN=Sdhb PE=2 SV=1; Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Mus musculus OX=10090 GN=Sdhb PE=2 SV=1" 0 2 2 0.3993 0 1 1 1 570.77277 1140.53826 1140.53705 1.06 0.0006 0/0 0 0 22730300 HCD 30 MS2 16.22108 989.3 110 46.5387 12159 12159 12154 QEplus033719.raw F4 1118.7 814.3 1027.8 1063.5 839.5 1072.1 47 2.78 1 FALSE 0.0006294 0.009482 0.413 -250 47634 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSQPATPTPLQNR [R].hSQPATPTPLQNR.[T] N-Term(TMT6plex) 1 Q3TJD7 PDZ and LIM domain protein 7 OS=Mus musculus OX=10090 GN=Pdlim7 PE=1 SV=1 Q3TJD7 PDZ and LIM domain protein 7 OS=Mus musculus OX=10090 GN=Pdlim7 PE=1 SV=1 0 3 3 0.7239 0 1 1 1 559.30811 1675.90976 1675.90773 1.21 0.00068 0/0 0 0 16762835 HCD 30 MS2 45.16746 501.7 76.125 46.541 12160 12160 12154 QEplus033719.raw F4 516 452.5 521.1 416.5 618.5 485.6 390 4.6 1 FALSE 1.14E-05 3.32E-08 1.518 -250 47648 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPVAGSEGAQYR [K].qPVAGSEGAQYR.[K] N-Term(TMT6plex) 6 Q3ULB1 Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1 D6RH72; Q99L61; P47226-2; P47226; Q3ULB1; Q921W7 Testin (Fragment) OS=Mus musculus OX=10090 GN=Tes PE=1 SV=2; Testin OS=Mus musculus OX=10090 GN=Tes PE=2 SV=1; Isoform TES1 of Testin OS=Mus musculus OX=10090 GN=Tes; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=2 0 2 2 0.7548 0 1 1 1 746.39087 1491.77446 1491.77532 -0.58 -0.00043 0/0 0 0 6769887.5 HCD 30 MS2 12.59644 175.6 110 46.5484 12163 12163 12154 QEplus033719.raw F4 176.7 167.6 184.9 106.8 260.5 157.2 233 3.67 1 FALSE 1.14E-05 6.45E-11 2.033 -250 47657 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YNEDDAK [R].yNEDDAk.[A] N-Term(TMT6plex); K7(TMT6plex) 3 Q9Z1K5 E3 ubiquitin-protein ligase ARIH1 OS=Mus musculus OX=10090 GN=Arih1 PE=1 SV=3 H9KV21; Q8C2W9; Q9Z1K5 RBR-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Arih1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Arih1 PE=2 SV=1; E3 ubiquitin-protein ligase ARIH1 OS=Mus musculus OX=10090 GN=Arih1 PE=1 SV=3 0 2 2 0.5092 0 1 1 1 656.84375 1312.68022 1312.67852 1.3 0.00085 0/0 0 0 5235694.5 HCD 30 MS2 16.31645 623.6 110 46.5509 12164 12164 12154 QEplus033719.raw F4 676.1 517.5 607.1 620 748.5 572.3 184 2.18 1 FALSE 0.001231 0.01662 0.314 -250 47667 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EATVPCSATGR [K].eATVPcSATGR.[E] N-Term(TMT6plex); C6(Carbamidomethyl) 1 Q8BKG3 Inactive tyrosine-protein kinase 7 OS=Mus musculus OX=10090 GN=Ptk7 PE=1 SV=1 Q8BKG3 Inactive tyrosine-protein kinase 7 OS=Mus musculus OX=10090 GN=Ptk7 PE=1 SV=1 0 2 2 0.5567 0 1 1 1 689.34998 1377.69267 1377.69938 -4.87 -0.00335 0/0 0 0 4222904.5 HCD 30 MS2 75.33151 425.6 110 46.5582 12166 12166 12165 QEplus033719.raw F4 359.7 443.6 461.3 338.3 565.5 385.1 157 2.03 1 FALSE 0.0006216 0.009268 0.417 -250 47673 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RITRPGNTDDPSGGNK [K].rITRPGNTDDPSGGNk.[V] N-Term(TMT6plex); K16(TMT6plex) 5 Q921F4 Heterogeneous nuclear ribonucleoprotein L-like OS=Mus musculus OX=10090 GN=Hnrnpll PE=1 SV=3 Q921F4; Q921F4-4; V9GXB6; Q9CSH0; Q3TBR4 Heterogeneous nuclear ribonucleoprotein L-like OS=Mus musculus OX=10090 GN=Hnrnpll PE=1 SV=3; Isoform 2 of Heterogeneous nuclear ribonucleoprotein L-like OS=Mus musculus OX=10090 GN=Hnrnpll; Heterogeneous nuclear ribonucleoprotein L-like OS=Mus musculus OX=10090 GN=Hnrnpll PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpll PE=2 SV=1; RRM_8 domain-containing protein OS=Mus musculus OX=10090 GN=Hnrnpll PE=2 SV=1 1 4 4 0.5597 0 1 1 1 536.54675 2143.16518 2143.162 1.49 0.0008 0/0 0 0 17176290 HCD 30 MS2 10.21992 449.5 96.72 46.5605 12167 12167 12165 QEplus033719.raw F4 451.6 414.6 505.8 341.1 538.5 445.5 384 4.02 1 FALSE 1.14E-05 3.40E-07 1.326 -250 47690 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYDAQK [K].eYDAQk.[A] N-Term(TMT6plex); K6(TMT6plex) 2 Q922Q8 Leucine-rich repeat-containing protein 59 OS=Mus musculus OX=10090 GN=Lrrc59 PE=1 SV=1 Q3UBL0; Q922Q8 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lrrc59 PE=2 SV=1; Leucine-rich repeat-containing protein 59 OS=Mus musculus OX=10090 GN=Lrrc59 PE=1 SV=1 0 2 2 0.0824 0 1 1 1 606.33765 1211.66802 1211.66722 0.65 0.0004 0/0 0 0 30164886 HCD 30 MS2 11.31677 1084 72.816 46.5673 12170 12170 12165 QEplus033719.raw F4 1393.1 955.8 1363.5 849.7 883.8 1058.1 225 2.67 1 FALSE 0.004491 0.08028 0.061 -250 47714 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLQEETGAK [K].rLQEETGAk.[MI] N-Term(TMT6plex); K9(TMT6plex) 3 Q60749 "KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Mus musculus OX=10090 GN=Khdrbs1 PE=1 SV=2" Q9WU01; Q9WU01-2; Q60749 "KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Mus musculus OX=10090 GN=Khdrbs2 PE=1 SV=1; Isoform 2 of KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Mus musculus OX=10090 GN=Khdrbs2; KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Mus musculus OX=10090 GN=Khdrbs1 PE=1 SV=2" 1 3 3 0.4691 0 1 1 1 497.29471 1489.86957 1489.87386 -2.88 -0.00143 0/0 0 0 9779796 HCD 30 MS2 61.78207 865.8 50.562 46.5765 12174 12174 12165 QEplus033719.raw F4 1268.7 628.7 897.4 720 748.2 931.7 440 3.56 1 FALSE 1.14E-05 9.02E-06 1.056 -250 47722 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CAQGCVCK [K].cAQGcVck.[G] N-Term(TMT6plex); C1(Carbamidomethyl); C5(Carbamidomethyl); C7(Carbamidomethyl); K8(TMT6plex) 4 P02802 Metallothionein-1 OS=Mus musculus OX=10090 GN=Mt1 PE=1 SV=1 P67983; A0A1D5RLN7; Q3U340; P02802 SWISS-PROT:P67983 (Bos taurus) Metallothionein-1A; Metallothionein-1 OS=Mus musculus OX=10090 GN=Mt1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mt1 PE=2 SV=1; Metallothionein-1 OS=Mus musculus OX=10090 GN=Mt1 PE=1 SV=1 0 2 2 0.6316 0 1 1 1 720.86169 1440.71611 1440.71618 -0.05 -0.00004 0/0 0 0 8171293.5 HCD 30 MS2 0 642.1 110 46.579 12175 12175 12165 QEplus033719.raw F4 657.8 674.9 869.8 497 591.3 561.7 139 3.61 1 TRUE 1.14E-05 0.0002424 0.783 -250 47731 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGHDILVR [R].gGHDILVR.[S] N-Term(TMT6plex) 1 Q9QZE5 Coatomer subunit gamma-1 OS=Mus musculus OX=10090 GN=Copg1 PE=1 SV=1 Q9QZE5 Coatomer subunit gamma-1 OS=Mus musculus OX=10090 GN=Copg1 PE=1 SV=1 0 2 2 0.2008 0 1 1 1 548.32788 1095.64849 1095.64721 1.17 0.00064 0/0 0 0 6842661.5 HCD 30 MS2 14.95635 663.7 110 46.5863 12177 12177 12176 QEplus033719.raw F4 731.1 566.3 676.4 538.4 745.9 724 106 2.39 1 FALSE 1.14E-05 0.0003574 0.751 -250 47765 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNAEQFK [R].rNAEQFk.[D] N-Term(TMT6plex); K7(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q7TQJ6; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 3 3 0.4243 0 1 1 1 450.93481 1350.78989 1350.7894 0.36 0.00016 0/0 0 0 20159576 HCD 30 MS2 7.186297 771.1 64.91 46.5956 12181 12181 12176 QEplus033719.raw F4 825.4 654.7 802.4 639.5 1033.7 671.1 388 3.37 1 FALSE 5.44E-05 0.002014 0.598 -250 47771 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASSNESLVANR [K].aSSNESLVANR.[L] N-Term(TMT6plex) 6 Q3UR33 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1 Q3UR33; Q3U7B3; Q61029; Q3U955; Q78WP6; Q61029-3 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; LEM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Isoform Epsilon of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo" 0 2 2 0.6554 0 1 1 1 688.87 1376.73271 1376.73312 -0.3 -0.0002 0/0 0 0 13809647 HCD 30 MS2 19.15719 569.9 110 46.5982 12182 12182 12176 QEplus033719.raw F4 500.6 597.4 636.3 413.1 726.2 545.9 293 3.86 1 FALSE 1.14E-05 8.12E-10 1.824 -250 47781 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGEEAGAYDGPR [R].dGEEAGAYDGPR.[T] N-Term(TMT6plex) 2 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 P27773; F6Q404 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2; Protein disulfide-isomerase A3 (Fragment) OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=1 0 2 2 0.8586 0 1 1 1 733.34198 1465.67668 1465.67567 0.69 0.00051 0/0 0 0 9520575 HCD 30 MS2 0 307.8 110 46.6029 12184 12184 12176 QEplus033719.raw F4 308.9 275.5 340.6 263.8 349.5 308.8 38 3.82 1 FALSE 1.14E-05 2.76E-10 1.913 -250 47786 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQQQQQNDVVK [K].qQQQQQNDVVk.[L] N-Term(TMT6plex); K11(TMT6plex) 1 Q3U0T9 Rab35 OS=Mus musculus OX=10090 GN=Rab35 PE=1 SV=1 Q3U0T9 Rab35 OS=Mus musculus OX=10090 GN=Rab35 PE=1 SV=1 0 3 3 0.7396 0 1 1 1 601.0036 1800.99625 1800.99683 -0.32 -0.00019 0/0 0 0 9299664 HCD 30 MS2 23.83757 510.7 110 46.6054 12185 12185 12176 QEplus033719.raw F4 519.4 448.8 557.5 438 560.5 539.9 435 4.34 1 FALSE 1.14E-05 1.06E-08 1.612 -250 47794 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEEGQKEEEKPR [K].eEEGQkEEEkPR.[K] N-Term(TMT6plex); K6(TMT6plex); K10(TMT6plex) 4 Q99JF8 PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1 PE=1 SV=1 Q99JF8; Q05CD2; Q99JF8-2; A2BI12 PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1 PE=1 SV=1; Psip1 protein (Fragment) OS=Mus musculus OX=10090 GN=Psip1 PE=2 SV=1; Isoform 2 of PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1; PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1 PE=1 SV=1 1 4 4 0.5018 0 1 1 1 544.5528 2175.18935 2175.18604 1.52 0.00083 0/0 0 0 4632385 HCD 30 MS2 14.80451 488.7 110 46.6079 12186 12186 12176 QEplus033719.raw F4 491.7 458.1 450.8 418.3 642.8 470.3 468 2.71 1 FALSE 4.43E-05 0.001654 0.616 -250 47800 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QFEDEEGEER [K].qFEDEEGEER.[T] N-Term(TMT6plex) 5 Q80TU6 MKIAA0670 protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1 Q9JIX8; Q9JIX8-4; B8JJ89; F6RJ39; Q80TU6 Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=3; Isoform 4 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Apoptotic chromatin condensation inducer in the nucleus (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=8; Apoptotic chromatin condensation inducer in the nucleus (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; MKIAA0670 protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1 0 2 2 0.6464 0 1 1 1 748.83844 1496.6696 1496.67025 -0.43 -0.00032 0/0 0 0 6433131.5 HCD 30 MS2 0 225.6 110 46.6153 12188 12188 12187 QEplus033719.raw F4 226.5 228.4 237.1 166 284.6 211 21 4.27 1 FALSE 1.14E-05 2.96E-05 0.958 -250 47806 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGENPEQDEAQK [K].sGENPEQDEAQk.[N] N-Term(TMT6plex); K12(TMT6plex) 2 Q61263 Sterol O-acyltransferase 1 OS=Mus musculus OX=10090 GN=Soat1 PE=1 SV=2 Q61263; Q06EZ3 Sterol O-acyltransferase 1 OS=Mus musculus OX=10090 GN=Soat1 PE=1 SV=2; O-acyltransferase OS=Mus musculus OX=10090 GN=Soat1 PE=2 SV=1 0 3 3 0.7837 0 1 1 1 597.30389 1789.89713 1789.89684 0.16 0.0001 0/0 0 0 5074450.5 HCD 30 MS2 0 328.9 110 46.6178 12189 12189 12187 QEplus033719.raw F4 330.9 314.6 378.3 245.6 385.5 318.8 204 4.67 1 FALSE 1.14E-05 4.81E-09 1.677 -250 47828 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPEEIER [K].tPEEIER.[L] N-Term(TMT6plex) 2 Q8C0Y0 Serine/threonine-protein phosphatase 4 regulatory subunit 4 OS=Mus musculus OX=10090 GN=Ppp4r4 PE=1 SV=2 Q8C0Y0-2; Q8C0Y0 Isoform 2 of Serine/threonine-protein phosphatase 4 regulatory subunit 4 OS=Mus musculus OX=10090 GN=Ppp4r4; Serine/threonine-protein phosphatase 4 regulatory subunit 4 OS=Mus musculus OX=10090 GN=Ppp4r4 PE=1 SV=2 0 2 2 0.3244 0 1 1 1 551.80017 1102.59307 1102.59417 -1 -0.00055 0/0 0 0 4955243 HCD 30 MS2 24.66486 538.7 110 46.627 12193 12193 12187 QEplus033719.raw F4 927.6 337.9 401.3 467.7 675.3 422.3 151 2.25 1 FALSE 0.001929 0.03311 0.202 -250 47834 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGPLGK [R].hGPLGk.[C] N-Term(TMT6plex); K6(TMT6plex) 4 Q3UE06 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nploc4 PE=2 SV=1 P60670-2; Q3UE06; P60670; Q3UDU9 Isoform 2 of Nuclear protein localization protein 4 homolog OS=Mus musculus OX=10090 GN=Nploc4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nploc4 PE=2 SV=1; Nuclear protein localization protein 4 homolog OS=Mus musculus OX=10090 GN=Nploc4 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nploc4 PE=2 SV=1 0 3 3 0.6652 0 1 1 1 356.23093 1066.67823 1066.67734 0.84 0.0003 0/0 0 0 4625682 HCD 30 MS2 51.34975 367.8 110 46.6295 12194 12194 12187 QEplus033719.raw F4 621.9 217.2 389.6 356.4 258.5 362.9 31 2.27 1 FALSE 0.002132 0.03988 0.175 -250 47843 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFDAQTGADREVQR [K].rFDAQTGADREVQR.[I] N-Term(TMT6plex) 8 Q569X4 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1 A0A140LIZ5; Q569X4; Q3TJ97; Q52L53; Q3TUN5; Q3UBF0; Q3TFA5; P54775 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=1 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; Psmc4 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 (Fragment) OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome regulatory subunit 6B OS=Mus musculus OX=10090 GN=Psmc4 PE=1 SV=2 2 3 3 0.6066 0 1 1 1 626.66431 1877.97837 1877.97794 0.23 0.00014 0/0 0 0 2977325.75 HCD 30 MS2 0 225.6 110 46.632 12195 12195 12187 QEplus033719.raw F4 261.5 181.6 224.1 176.9 276.8 232.6 373 4.22 1 FALSE 1.14E-05 5.92E-07 1.281 -250 47851 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLQDQGSK [K].sLQDQGSk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 Q5BKS5 Hook homolog 3 (Drosophila) OS=Mus musculus OX=10090 GN=Hook3 PE=2 SV=1 Q3UUZ6; Q5BKS5; Q8BUK6 HOOK domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hook3 PE=2 SV=1; Hook homolog 3 (Drosophila) OS=Mus musculus OX=10090 GN=Hook3 PE=2 SV=1; Protein Hook homolog 3 OS=Mus musculus OX=10090 GN=Hook3 PE=1 SV=2 0 2 2 0.2645 0 1 1 1 660.88 1320.75273 1320.75235 0.29 0.00019 0/0 0 0 2632373.25 HCD 30 MS2 0 344.5 110 46.6345 12196 12196 12187 QEplus033719.raw F4 370 305.4 375.5 256.7 420.3 339.3 539 3.1 1 FALSE 1.14E-05 6.86E-05 0.888 -250 47861 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GKPETDAVDR [K].gkPETDAVDR.[S] N-Term(TMT6plex); K2(TMT6plex) 3 P39447 Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=2 Q91YW2; P39447; B9EHJ3 Tjp1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tjp1 PE=2 SV=1; Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=2; Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=1 0 3 3 0.3091 0 1 1 1 515.96045 1545.86679 1545.86369 2.01 0.00103 0/0 0 0 14734274 HCD 30 MS2 44.33993 1184.4 108.75 46.637 12197 12197 12187 QEplus033719.raw F4 1189.2 1175.5 1409.9 869.2 1230.6 1232.1 405 2.75 1 FALSE 0.001066 0.01371 0.349 -250 47868 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGIHEDSTNR [K].lGIHEDSTNR.[R] N-Term(TMT6plex) 4 Q71LX8 Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q811H6; Q80YC2; Q71LX8; E9Q0C3 Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; Heat shock protein HSP 90-beta (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 0 3 3 0.7557 0 1 1 1 457.57944 1370.72376 1370.72256 0.88 0.0004 0/0 0 0 31812330 HCD 30 MS2 14.70707 450.1 53.988 46.6443 12199 12199 12198 QEplus033719.raw F4 537.7 372.8 442.4 398.1 528 421.8 180 3.93 1 FALSE 1.14E-05 2.48E-07 1.352 -250 47877 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATEAGSLEAR [R].aTEAGSLEAR.[L] N-Term(TMT6plex) 9 H3BJU7 Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1 H3BJU7; H3BKH9; Q60875; Q60875-5; H3BJX8; H3BJ40; H3BJ45; A0A2X0SFE2; Q60875-4 Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=4; Isoform 5 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=2; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Guanine nucleotide exchange factor H1 (Fragment) OS=Mus musculus OX=10090 GN=ARHGEF2 PE=4 SV=1; Isoform 4 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2 0 2 2 0.549 0 1 1 1 617.33588 1233.66448 1233.66365 0.67 0.00042 0/0 0 0 14588353 HCD 30 MS2 21.36457 717.2 110 46.6468 12200 12200 12198 QEplus033719.raw F4 806.7 534.9 814.7 623.7 748.1 774.9 294 3.57 1 FALSE 1.14E-05 1.24E-08 1.599 -250 47889 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVYPEAR [K].eVYPEAR.[K] N-Term(TMT6plex) 4 E9Q317 18 kDa Sin3-associated polypeptide OS=Mus musculus OX=10090 GN=Sap18 PE=1 SV=1 D3Z2N9; E9Q317; D3YY73; Q4FZH3 Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=1 SV=1; 18 kDa Sin3-associated polypeptide OS=Mus musculus OX=10090 GN=Sap18 PE=1 SV=1; Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=1 SV=1; Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=2 SV=1 0 2 2 0.2316 0 1 1 1 546.79883 1092.59038 1092.58869 1.55 0.00084 0/0 0 0 6213218.5 HCD 30 MS2 16.65353 686.2 110 46.6516 12202 12202 12198 QEplus033719.raw F4 749.9 637.6 748.8 515.6 776.3 688.8 230 2.72 1 FALSE 0.0008268 0.01137 0.383 -250 47895 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQQQQQNDVVK [K].qQQQQQNDVVk.[L] N-Term(TMT6plex); K11(TMT6plex) 1 Q3U0T9 Rab35 OS=Mus musculus OX=10090 GN=Rab35 PE=1 SV=1 Q3U0T9 Rab35 OS=Mus musculus OX=10090 GN=Rab35 PE=1 SV=1 0 2 2 0.7317 0 1 1 1 901.00244 1800.99761 1800.99683 0.43 0.00039 0/0 0 0 2398271.75 HCD 30 MS2 0 263.2 110 46.6541 12203 12203 12198 QEplus033719.raw F4 249.8 236.1 297.4 223.8 283.5 288.6 427 4.92 1 FALSE 1.14E-05 7.82E-11 2.017 -250 47901 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCYDLSCHAR [R].scYDLScHAR.[A] N-Term(TMT6plex); C2(Carbamidomethyl); C7(Carbamidomethyl) 1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 0 3 3 0.854 0 1 1 1 499.89734 1497.67746 1497.6776 -0.09 -0.00005 0/0 0 0 11316924 HCD 30 MS2 24.3065 385.8 110 46.6566 12204 12204 12198 QEplus033719.raw F4 379.9 327.6 381.7 367.5 486.9 371.3 29 4.59 1 FALSE 1.14E-05 1.39E-07 1.4 -250 47909 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SKDADDQKPGPSER [K].skDADDQkPGPSER.[S] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 2 D3YXK2 Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=2 D3YXK2; S4R1M2 Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=2; Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=1 1 4 4 0.5822 0 1 1 1 555.05798 2217.2101 2217.20784 1.02 0.00057 0/0 0 0 8446903 HCD 30 MS2 17.83941 530.2 110 46.6591 12205 12205 12198 QEplus033719.raw F4 510.5 616.8 597.2 423 546.5 487.2 444 2.92 1 FALSE 0.0003496 0.006839 0.461 -250 47930 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLQEETGAK [K].rLQEETGAk.[MI] N-Term(TMT6plex); K9(TMT6plex) 3 Q60749 "KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Mus musculus OX=10090 GN=Khdrbs1 PE=1 SV=2" Q9WU01; Q9WU01-2; Q60749 "KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Mus musculus OX=10090 GN=Khdrbs2 PE=1 SV=1; Isoform 2 of KH domain-containing, RNA-binding, signal transduction-associated protein 2 OS=Mus musculus OX=10090 GN=Khdrbs2; KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Mus musculus OX=10090 GN=Khdrbs1 PE=1 SV=2" 1 2 2 0.53 0 1 1 1 745.44177 1489.87627 1489.87386 1.61 0.0012 0/0 0 0 6213198 HCD 30 MS2 0 267.3 110 46.6666 12208 12208 12198 QEplus033719.raw F4 269.3 244.4 274.4 207.6 375.3 233.1 459 3 1 FALSE 1.14E-05 1.36E-05 1.022 -250 47943 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HAIVICNR [K].hAIVIcNR.[K] N-Term(TMT6plex); C6(Carbamidomethyl) 3 Q8CIE6 Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2 Q63ZW9; Q8CIE6; Q8BTF0 Copa protein (Fragment) OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1 0 3 3 0.6178 0 1 1 1 404.56784 1211.68897 1211.68803 0.78 0.00031 0/0 0 0 39326976 HCD 30 MS2 12.80933 307.1 31.394 46.6787 12212 12212 12209 QEplus033719.raw F4 336.7 230 322.8 250.8 320.3 382.2 234 3.48 1 FALSE 1.14E-05 0.0004724 0.727 -250 47952 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYLAQR [R].aYLAQR.[K] N-Term(TMT6plex) 3 O89079 Coatomer subunit epsilon OS=Mus musculus OX=10090 GN=Cope PE=1 SV=3 O89079; D3Z315; Q9D1J2 Coatomer subunit epsilon OS=Mus musculus OX=10090 GN=Cope PE=1 SV=3; Coatomer subunit epsilon (Fragment) OS=Mus musculus OX=10090 GN=Cope PE=1 SV=1; Coatomer subunit epsilon OS=Mus musculus OX=10090 GN=Cope PE=2 SV=1 0 2 2 0.2166 0 1 1 1 475.78497 950.56267 950.56208 0.62 0.00029 0/0 0 0 33119546 HCD 30 MS2 28.61492 781.8 36.332 46.681 12213 12213 12209 QEplus033719.raw F4 640.7 794 921.6 613.5 883.7 837 55 2.17 1 FALSE 0.006953 0.1103 -0.02 -250 47962 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVYLSAR [K].hVYLSAR.[I] N-Term(TMT6plex) 3 Q9DB73 NADH-cytochrome b5 reductase 1 OS=Mus musculus OX=10090 GN=Cyb5r1 PE=1 SV=1 G3UZG6; Q9DB73; Q9DB73-2 Cytochrome-b5 reductase (Fragment) OS=Mus musculus OX=10090 GN=Cyb5r1 PE=1 SV=1; NADH-cytochrome b5 reductase 1 OS=Mus musculus OX=10090 GN=Cyb5r1 PE=1 SV=1; Isoform 2 of NADH-cytochrome b5 reductase 1 OS=Mus musculus OX=10090 GN=Cyb5r1 0 3 3 0.4067 0 1 1 1 358.88046 1074.62683 1074.62574 1.01 0.00036 0/0 0 0 16329954 HCD 30 MS2 44.69372 467.6 59.458 46.6832 12214 12214 12209 QEplus033719.raw F4 559.9 270.4 505 524.6 396 549.9 357 2.68 1 FALSE 0.0005848 0.008744 0.426 -250 47970 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YNNQLATR [K].yNNQLATR.[T] N-Term(TMT6plex) 3 A2AKI5 Integrin alpha-V OS=Mus musculus OX=10090 GN=Itgav PE=1 SV=1 A2AKI5; P43406; A0A0F7IQ06 Integrin alpha-V OS=Mus musculus OX=10090 GN=Itgav PE=1 SV=1; Integrin alpha-V OS=Mus musculus OX=10090 GN=Itgav PE=1 SV=2; Alpha v integrin OS=Mus musculus OX=10090 GN=Itgav PE=2 SV=1 0 2 2 0.428 0 1 1 1 604.83521 1208.66313 1208.6585 3.83 0.00232 0/0 0 0 13071836 HCD 30 MS2 7.166205 793.1 110 46.6857 12215 12215 12209 QEplus033719.raw F4 957.2 731.4 930.5 641.9 688.4 809 303 2.64 1 FALSE 1.14E-05 0.0005015 0.722 -250 47980 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGSASCGTSFR [K].kGSAScGTSFR.[G] N-Term(TMT6plex); K1(TMT6plex); C6(Carbamidomethyl) 2 Q65Z40 Wings apart-like protein homolog OS=Mus musculus OX=10090 GN=Wapl PE=1 SV=2 Q65Z40; B7ZP47 Wings apart-like protein homolog OS=Mus musculus OX=10090 GN=Wapl PE=1 SV=2; Wapal protein OS=Mus musculus OX=10090 GN=Wapl PE=1 SV=1 1 3 3 0.1098 0 1 1 1 539.29126 1615.85923 1615.86265 -2.12 -0.00114 0/0 0 0 7849393.5 HCD 30 MS2 28.89445 704.8 110 46.6882 12216 12216 12209 QEplus033719.raw F4 760.7 591.6 749.7 608.3 791.9 726.3 309 1.73 1 FALSE 0.002586 0.05124 0.138 -250 47987 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MFGGSGTSSRPSSNR [R].mFGGSGTSSRPSSNR.[S] N-Term(TMT6plex) 8 Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; A2AKJ2; Q3U6S1; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.6875 0 1 1 1 878.93427 1756.86125 1756.8598 0.83 0.00073 0/0 0 0 5552683 HCD 30 MS2 0 179 110 46.6908 12217 12217 12209 QEplus033719.raw F4 171.9 197.9 203.6 109.4 239.2 152.1 137 2.88 1 FALSE 1.14E-05 2.35E-05 0.977 -250 47995 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEAPAAAK [K].tEAPAAAk.[S] N-Term(TMT6plex); K8(TMT6plex) 4 Q9QY76 Vesicle-associated membrane protein-associated protein B OS=Mus musculus OX=10090 GN=Vapb PE=1 SV=3 Q9QY76; Q3TU78; Q8BH80; Q3TA54 "Vesicle-associated membrane protein-associated protein B OS=Mus musculus OX=10090 GN=Vapb PE=1 SV=3; MSP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Vapb PE=2 SV=1; Vesicle-associated membrane protein, associated protein B and C OS=Mus musculus OX=10090 GN=Vapb PE=1 SV=1; MSP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Vapb PE=2 SV=1" 0 2 2 0.4615 0 1 1 1 608.86938 1216.73149 1216.73016 1.1 0.00067 0/0 0 0 5225723.5 HCD 30 MS2 32.88971 664.3 110 46.6933 12218 12218 12209 QEplus033719.raw F4 827 492.7 712.8 661.6 677.7 614 416 2.86 1 FALSE 1.14E-05 2.88E-05 0.96 -250 47999 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQQAQVEK [R].eQQAQVEk.[E] N-Term(TMT6plex); K8(TMT6plex) 5 Q80W39 "Splicing factor 3b, subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1" Q80W39; Q3UAI4; Q3UBH2; Q8BL33; Q3UJB0 "Splicing factor 3b, subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; SAP domain-containing protein OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; SAP domain-containing protein OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; PSP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; Splicing factor 3b, subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=1 SV=1" 0 2 2 0.4545 0 1 1 1 709.40698 1417.80669 1417.80511 1.11 0.00079 0/0 0 0 3317074.75 HCD 30 MS2 0 299.6 110 46.6958 12219 12219 12209 QEplus033719.raw F4 367 231 310.7 211.5 419.2 258.4 472 3.3 1 FALSE 1.14E-05 5.12E-05 0.912 -250 48019 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTVETEDSR [K].vTVETEDSR.[T] N-Term(TMT6plex) 2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 Q1WNQ4; P13541 Embryonic myosin heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 0 2 2 0.604 0 1 1 1 632.83325 1264.65923 1264.65823 0.79 0.0005 0/0 0 0 97760768 HCD 30 MS2 17.54169 859.3 20.207 46.7079 12223 12223 12220 QEplus033719.raw F4 1048.4 229.1 683.5 1546.2 263.4 1384.9 214 3.03 1 FALSE 1.14E-05 9.49E-05 0.861 -250 48026 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFDAQTGADREVQR [K].rFDAQTGADREVQR.[I] N-Term(TMT6plex) 8 Q569X4 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1 A0A140LIZ5; Q569X4; Q3TJ97; Q52L53; Q3TUN5; Q3UBF0; Q3TFA5; P54775 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=1 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; Psmc4 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 (Fragment) OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome regulatory subunit 6B OS=Mus musculus OX=10090 GN=Psmc4 PE=1 SV=2 2 4 4 0.6604 0 1 1 1 470.25018 1877.9789 1877.97794 0.51 0.00024 0/0 0 0 32114014 HCD 30 MS2 22.19889 320.7 40.288 46.7101 12224 12224 12220 QEplus033719.raw F4 337.9 232.2 364.3 311.1 291.5 387.5 379 5.33 1 FALSE 1.14E-05 2.59E-08 1.539 -250 48038 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATLPEADRER [K].aTLPEADRER.[G] N-Term(TMT6plex) 1 O88990 Alpha-actinin-3 OS=Mus musculus OX=10090 GN=Actn3 PE=2 SV=1 O88990 Alpha-actinin-3 OS=Mus musculus OX=10090 GN=Actn3 PE=2 SV=1 1 3 3 0.4536 0 1 1 1 462.9234 1386.75565 1386.75386 1.29 0.0006 0/0 0 0 29479020 HCD 30 MS2 12.24067 563.3 35.31 46.7147 12226 12226 12220 QEplus033719.raw F4 635.7 279.3 663 612.4 348.1 841.4 329 3.77 1 FALSE 1.14E-05 0.0001821 0.807 -250 48051 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNMALQR [K].dNMALQR.[V] N-Term(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 0 2 2 0.1741 0 1 1 1 538.78973 1076.57219 1076.57199 0.18 0.0001 0/0 0 0 8921079 HCD 30 MS2 20.58565 963.6 110 46.7194 12228 12228 12220 QEplus033719.raw F4 1132.9 753 1037.2 861.7 907.7 1089 215 2.7 1 FALSE 0.0001707 0.003939 0.529 -250 48060 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YSQHDMNK [K].ySQHDMNk.[A] N-Term(TMT6plex); K8(TMT6plex) 6 B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 Q4FK88; Q3US43; Q4FJV4; Q3U5N9; A0A494BBD8; B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 0 3 3 0.6801 0 1 1 1 494.25909 1480.76273 1480.76187 0.58 0.00029 0/0 0 0 30962990 HCD 30 MS2 27.94856 897.8 48.26 46.7217 12229 12229 12220 QEplus033719.raw F4 876.4 1131 680.3 837.6 1508.3 353.2 218 3.97 1 FALSE 1.14E-05 2.91E-05 0.959 -250 48097 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HDCDLLR [R].hDcDLLR.[E] N-Term(TMT6plex); C3(Carbamidomethyl) 14 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; B2RWX0; B2RQQ1; I6L963; B1AR69; B2RY26; A2AQP0; B2RXX9; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-7B OS=Mus musculus OX=10090 GN=Myh7b PE=3 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 3 3 0.6675 0 1 1 1 386.53644 1157.59476 1157.59346 1.13 0.00043 0/0 0 0 278817152 HCD 30 MS2 17.16627 187.8 3.88 46.736 12234 12234 12231 QEplus033719.raw F4 226.1 49.3 133.1 381.2 90.9 246.1 101 4.06 5 FALSE 5.44E-05 0.002017 0.598 -250 48106 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AADVHEVRK [K].aADVHEVRk.[V] N-Term(TMT6plex); K9(TMT6plex) 2 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm 1 4 4 0.5833 0 1 1 1 371.47543 1482.8799 1482.87928 0.42 0.00016 0/0 0 0 23603042 HCD 30 MS2 25.56751 658.6 50.049 46.7427 12237 12237 12231 QEplus033719.raw F4 828.6 542.9 593.7 596.5 841.9 547.8 321 3.72 2 FALSE 1.14E-05 2.38E-05 0.976 -250 48113 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FNTHQGQTK [R].fNTHQGQTk.[V] N-Term(TMT6plex); K9(TMT6plex) 1 Q3UYC1 Diphosphomevalonate decarboxylase OS=Mus musculus OX=10090 GN=Mvd PE=1 SV=1 Q3UYC1 Diphosphomevalonate decarboxylase OS=Mus musculus OX=10090 GN=Mvd PE=1 SV=1 0 3 3 0.5194 0 1 1 1 506.95169 1518.84052 1518.8429 -1.57 -0.00079 0/0 0 0 17980592 HCD 30 MS2 50.1072 814.7 61.145 46.745 12238 12238 12231 QEplus033719.raw F4 869.8 615 868.9 801.5 802.1 931.1 419 2.83 1 FALSE 0.0003496 0.006817 0.462 -250 48120 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KIQNDAGVR [K].kIQNDAGVR.[I] N-Term(TMT6plex); K1(TMT6plex) 15 A2AJ72; Q3U0V1; A0A0G2JFY5 Far upstream element (FUSE)-binding protein 3 OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1;Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2;Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1 A2AJ72; A0A0A6YVV5; Q3U0V1; A0A0G2JFY5; Q91WJ8-2; Q3TIX6; A0A0G2JGW9; A0A3B2WCD8; Q0P6B2; A0A0G2JG00; A0A3B2W465; Q3TUE1; Q91WJ8; Q3UUU2; Q3ULP9 Far upstream element (FUSE)-binding protein 3 OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1; Far upstream element (FUSE)-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1; Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Isoform 2 of Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1; Far upstream element (FUSE)-binding protein 3 OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=1; Far upstream element (FUSE) binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=2 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fubp3 PE=2 SV=1 1 2 2 0.5324 0 1 1 1 729.94434 1458.8814 1458.87928 1.45 0.00106 0/0 0 0 12393460 HCD 30 MS2 0 365.8 110 46.7475 12239 12239 12231 QEplus033719.raw F4 350.9 385 378.2 262 485.1 333.6 537 2.78 3 FALSE 1.14E-05 7.52E-06 1.071 -250 48139 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSSTQEGVR [K].lSSTQEGVR.[K] N-Term(TMT6plex) 8 Q6PDI5 Proteasome adapter and scaffold protein ECM29 OS=Mus musculus OX=10090 GN=Ecpas PE=1 SV=3 A2ALV6; A2ALV9; Q6PDI5-2; A2ALW1; Q8C9Q5; A2ALV7; Q6PDI5; A2ALV8 Proteasome adapter and scaffold protein ECM29 OS=Mus musculus OX=10090 GN=Ecpas PE=1 SV=1; Proteasome adapter and scaffold protein ECM29 (Fragment) OS=Mus musculus OX=10090 GN=Ecpas PE=1 SV=1; Isoform 2 of Proteasome adapter and scaffold protein ECM29 OS=Mus musculus OX=10090 GN=Ecpas; Proteasome adapter and scaffold protein ECM29 OS=Mus musculus OX=10090 GN=Ecpas PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ecpas PE=2 SV=1; Proteasome adapter and scaffold protein ECM29 (Fragment) OS=Mus musculus OX=10090 GN=Ecpas PE=1 SV=1; Proteasome adapter and scaffold protein ECM29 OS=Mus musculus OX=10090 GN=Ecpas PE=1 SV=3; Proteasome adapter and scaffold protein ECM29 (Fragment) OS=Mus musculus OX=10090 GN=Ecpas PE=1 SV=1 0 2 2 0.5284 0 1 1 1 603.33844 1205.6696 1205.66873 0.72 0.00044 0/0 0 0 6891027.5 HCD 30 MS2 9.159313 761 110 46.7524 12241 12241 12231 QEplus033719.raw F4 789.9 697.1 865 615.8 805 793.3 397 2.99 1 FALSE 1.14E-05 1.96E-05 0.992 -250 48149 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGPALGEGER [R].aGPALGEGER.[K] N-Term(TMT6plex) 6 Q99MR6 Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1 Q99MR6-3; Q99MR6; Q99MR6-4; A0A0G2JDF1; A0A0G2JDN3; Q99MR6-2 Isoform C of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1; Isoform D of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Serrate RNA effector molecule homolog (Fragment) OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1; Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1; Isoform B of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt 0 2 2 0.6462 0 1 1 1 593.32379 1185.64031 1185.64252 -1.86 -0.00111 0/0 0 0 10541140 HCD 30 MS2 13.67529 590.5 110 46.7622 12244 12244 12242 QEplus033719.raw F4 584.1 607 700.7 498.2 540.5 612.8 177 3.59 1 FALSE 1.14E-05 5.15E-08 1.482 -250 48166 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGGDIANR [K].mGGDIANR.[V] N-Term(TMT6plex) 3 Q3TGU7 Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=1 Q3TGU7; Q05BN2; Q3UMW2 Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=1; Pa2g4 protein (Fragment) OS=Mus musculus OX=10090 GN=Pa2g4 PE=2 SV=1; Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=2 SV=1 0 2 2 0.3939 0 1 1 1 531.78229 1062.5573 1062.55634 0.9 0.00048 0/0 0 0 36438240 HCD 30 MS2 2.848241 991.7 55.176 46.7667 12246 12246 12242 QEplus033719.raw F4 1009.3 913.6 1114.9 742.4 1124.2 1045.8 192 2.64 1 FALSE 1.14E-05 0.0003989 0.741 -250 48184 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGIHEDSTNR [K].lGIHEDSTNR.[R] N-Term(TMT6plex) 4 Q71LX8 Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q811H6; Q80YC2; Q71LX8; E9Q0C3 Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; Heat shock protein HSP 90-beta (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 0 2 2 0.7021 0 1 1 1 685.86658 1370.72588 1370.72256 2.42 0.00166 0/0 0 0 19771404 HCD 30 MS2 13.71931 649.9 93.036 46.7712 12248 12248 12242 QEplus033719.raw F4 711.7 560.2 702.8 532.9 824.3 567.3 210 3.29 1 FALSE 1.14E-05 5.35E-08 1.479 -250 48202 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DPDTEQLQR [R].dPDTEQLQR.[I] N-Term(TMT6plex) 1 P33146 Cadherin-15 OS=Mus musculus OX=10090 GN=Cdh15 PE=1 SV=3 P33146 Cadherin-15 OS=Mus musculus OX=10090 GN=Cdh15 PE=1 SV=3 0 2 2 0.588 0 1 1 1 665.84412 1330.68096 1330.68002 0.7 0.00047 0/0 0 0 7785771 HCD 30 MS2 0 342 110 46.7785 12251 12251 12242 QEplus033719.raw F4 366.3 248.4 380.8 238 461.3 357.4 129 3.01 1 FALSE 3.35E-05 0.001157 0.649 -250 48218 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TKPQMQEER [R].tkPQMQEER.[R] N-Term(TMT6plex); K2(TMT6plex) 2 Q6P4T2 U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Mus musculus OX=10090 GN=Snrnp200 PE=1 SV=1 Q8BYH6; Q6P4T2 Helicase ATP-binding domain-containing protein OS=Mus musculus OX=10090 GN=Snrnp200 PE=2 SV=1; U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Mus musculus OX=10090 GN=Snrnp200 PE=1 SV=1 0 3 3 0.5 0 1 1 1 535.63306 1604.88462 1604.88305 0.98 0.00052 0/0 0 0 6381339.5 HCD 30 MS2 0 808.7 110 46.7882 12254 12254 12253 QEplus033719.raw F4 879.6 747.7 854.3 583.1 946.6 841.1 394 2.64 1 FALSE 3.35E-05 0.001391 0.632 -250 48226 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HAIVICNR [K].hAIVIcNR.[K] N-Term(TMT6plex); C6(Carbamidomethyl) 3 Q8CIE6 Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2 Q63ZW9; Q8CIE6; Q8BTF0 Copa protein (Fragment) OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1 0 2 2 0.4764 0 1 1 1 606.34735 1211.68743 1211.68803 -0.5 -0.0003 0/0 0 0 3565182.25 HCD 30 MS2 15.81497 465.9 110 46.7908 12255 12255 12253 QEplus033719.raw F4 523.8 373.5 540.5 385.6 479.4 492.5 247 2.33 1 FALSE 5.44E-05 0.00241 0.58 -250 48240 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQAQEDREK [R].iQAQEDREk.[G] N-Term(TMT6plex); K9(TMT6plex) 2 Q9CQV1 Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX=10090 GN=Pam16 PE=1 SV=1 Q9CQV1; A0A1L1SQA2 Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX=10090 GN=Pam16 PE=1 SV=1; Predicted gene 9803 OS=Mus musculus OX=10090 GN=Gm9803 PE=1 SV=1 1 3 3 0.479 0 1 1 1 525.63562 1574.89231 1574.89024 1.31 0.00069 0/0 0 0 8621868 HCD 30 MS2 26.06009 632.5 110 46.8 12259 12259 12253 QEplus033719.raw F4 810.8 412.2 595.5 638.9 730.2 607.5 487 2.86 1 FALSE 1.14E-05 2.41E-05 0.975 -250 48246 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPGAASALDDSRR [K].gPGAASALDDSRR.[D] N-Term(TMT6plex) 2 P17426 AP-2 complex subunit alpha-1 OS=Mus musculus OX=10090 GN=Ap2a1 PE=1 SV=1 P17426-2; P17426 Isoform B of AP-2 complex subunit alpha-1 OS=Mus musculus OX=10090 GN=Ap2a1; AP-2 complex subunit alpha-1 OS=Mus musculus OX=10090 GN=Ap2a1 PE=1 SV=1 1 3 3 0.6503 0 1 1 1 501.2695 1501.79395 1501.79203 1.27 0.00064 0/0 0 0 8222515.5 HCD 30 MS2 44.26938 757.7 110 46.8025 12260 12260 12253 QEplus033719.raw F4 890.3 554.3 735.2 745.5 842.4 778.3 254 5.72 1 FALSE 1.14E-05 1.88E-12 2.325 -250 48253 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQPSDNAPEK [K].aQPSDNAPEk.[G] N-Term(TMT6plex); K10(TMT6plex) 4 A0A3Q4EBK4 Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1 Q6P1B9; O08539-2; A0A3Q4EBK4; O08539 Bin1 protein OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Isoform 2 of Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1; Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1 0 2 2 0.6092 0 1 1 1 757.91528 1514.82329 1514.82149 1.19 0.0009 0/0 0 0 7348704 HCD 30 MS2 15.21715 436.6 110 46.805 12261 12261 12253 QEplus033719.raw F4 477.5 313.1 522 355.7 436 515.1 364 3.71 1 FALSE 1.14E-05 2.00E-08 1.56 -250 48262 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QKFEECQR [K].qkFEEcQR.[L] N-Term(TMT6plex); K2(TMT6plex); C6(Carbamidomethyl) 1 Q9ERU9 E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 Q9ERU9 E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 1 3 3 0.0769 0 1 1 1 528.28656 1582.84513 1582.84118 2.49 0.00131 0/0 0 0 7096344.5 HCD 30 MS2 65.0474 820.7 110 46.8075 12262 12262 12253 QEplus033719.raw F4 879.8 714 859.5 634.6 1057 779.4 371 1.56 1 FALSE 0.003953 0.07366 0.078 -250 48272 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGGSLPPQAR [K].eGGSLPPQAR.[S] N-Term(TMT6plex) 3 E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.5564 0 1 1 1 620.84662 1240.68596 1240.68472 1 0.00062 0/0 0 0 6104515.5 HCD 30 MS2 0 439.4 110 46.8101 12263 12263 12253 QEplus033719.raw F4 419.1 395.7 566.9 402.7 393.6 458.1 256 2.75 1 FALSE 1.14E-05 1.29E-05 1.026 -250 48296 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HDCDLLR [R].hDcDLLR.[E] N-Term(TMT6plex); C3(Carbamidomethyl) 14 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; B2RWX0; B2RQQ1; I6L963; B1AR69; B2RY26; A2AQP0; B2RXX9; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-7B OS=Mus musculus OX=10090 GN=Myh7b PE=3 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.6008 0 1 1 1 579.3017 1157.59612 1157.59346 2.3 0.00133 0/0 0 0 72121120 HCD 30 MS2 48.03564 763.8 16.499 46.8264 12269 12269 12264 QEplus033719.raw F4 829.4 303.7 584.4 1347.8 602.3 915.4 101 2.48 5 FALSE 0.001125 0.01496 0.333 -250 48311 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDDNRESLEK [R].sDDNRESLEk.[R] N-Term(TMT6plex); K10(TMT6plex) 2 Q9DBP5 UMP-CMP kinase OS=Mus musculus OX=10090 GN=Cmpk1 PE=1 SV=1 Q9DBP5; A0A0R4J093 UMP-CMP kinase OS=Mus musculus OX=10090 GN=Cmpk1 PE=1 SV=1; UMP-CMP kinase OS=Mus musculus OX=10090 GN=Cmpk1 PE=1 SV=1 1 3 3 0.607 0 1 1 1 550.96191 1650.87119 1650.8699 0.78 0.00043 0/0 0 0 42971368 HCD 30 MS2 23.12729 872 37.408 46.8309 12271 12271 12264 QEplus033719.raw F4 1044.8 763.3 887.6 683.6 1051 801.7 309 2.57 1 FALSE 2.26E-05 0.0009669 0.665 -250 48324 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SFQPDTGR [R].sFQPDTGR.[I] N-Term(TMT6plex) 8 G5E8R3 Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=1 SV=1 G5E8R3; Q3UFS6; Q05920; Q3TCQ3; Q8BP54; Q3T9S7; E9QPD7; Q62043 "Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=1 SV=1; Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1; Pyruvate carboxylase, mitochondrial OS=Mus musculus OX=10090 GN=Pc PE=1 SV=1; Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1; Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1; Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=1 SV=1; Pyruvate carboxylase (Fragment) OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1" 0 2 2 0.6213 0 1 1 1 568.79938 1136.59148 1136.58975 1.52 0.00086 0/0 0 0 15391671 HCD 30 MS2 0 628.7 110 46.8379 12274 12274 12264 QEplus033719.raw F4 639.7 323 710.5 848.5 354.7 896 171 2.72 1 FALSE 1.14E-05 0.0001782 0.809 -250 48331 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGPADSFNDR [R].sGPADSFNDR.[V] N-Term(TMT6plex) 4 Q8BMJ2 "Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2" Q6ZPT2; A0A494BBF9; Q8BMJ2; Q99JK2 "Leucyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1; Leucyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Lars PE=1 SV=1; Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2; Lars protein OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1" 0 2 2 0.7459 0 1 1 1 647.81525 1294.62322 1294.62251 0.55 0.00035 0/0 0 0 23457302 HCD 30 MS2 0 808.7 110 46.8452 12276 12276 12275 QEplus033719.raw F4 851.5 647.8 864.8 783.1 798.3 906.7 88 3.66 1 FALSE 1.14E-05 1.33E-07 1.404 -250 48339 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYQVSR [R].vYQVSR.[T] N-Term(TMT6plex) 3 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; Q9JJY2; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin (Fragment) OS=Mus musculus OX=10090 GN=des PE=4 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 2 2 0.3043 0 1 1 1 490.79037 980.57347 980.57265 0.84 0.00041 0/0 0 0 27258338 HCD 30 MS2 33.39452 875.6 40.83 46.8475 12277 12277 12275 QEplus033719.raw F4 1013.6 441.3 953.4 1037.4 666.6 1141.2 57 2.07 1 FALSE 0.005254 0.08967 0.035 -250 48349 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EREEIEK [R].eREEIEk.[Q] N-Term(TMT6plex); K7(TMT6plex) 2 B2RTB0 PDGFA associated protein 1 OS=Mus musculus OX=10090 GN=Pdap1 PE=1 SV=1 Q1WWJ8; B2RTB0 Pdap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Pdap1 PE=2 SV=1; PDGFA associated protein 1 OS=Mus musculus OX=10090 GN=Pdap1 PE=1 SV=1 1 3 3 0.1955 0 1 1 2 464.26993 1390.79523 1390.79422 0.73 0.00034 0/0 0 0 73242368 HCD 30 MS2 8.088993 766.9 23.382 46.8497 12278 12278 12275 QEplus033719.raw F4 850 577.1 751.5 733.8 980.4 708.4 500 2.66 1 FALSE 0.001719 0.02876 0.223 -250 48356 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AADVHEVRK [K].aADVHEVRk.[V] N-Term(TMT6plex); K9(TMT6plex) 2 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm 1 3 3 0.5202 0 1 1 1 494.96497 1482.88034 1482.87928 0.72 0.00035 0/0 0 0 67712088 HCD 30 MS2 38.81751 1009 23.47 46.852 12279 12279 12275 QEplus033719.raw F4 1013.6 987 822.6 1003.9 1609.6 617.1 320 3.21 2 FALSE 1.14E-05 4.54E-05 0.923 -250 48375 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STSCTTSLASQGER [R].sTScTTSLASQGER.[K] N-Term(TMT6plex); C4(Carbamidomethyl) 2 Q6A065 Centrosomal protein of 170 kDa OS=Mus musculus OX=10090 GN=Cep170 PE=1 SV=2 Q6A065; H7BX26 Centrosomal protein of 170 kDa OS=Mus musculus OX=10090 GN=Cep170 PE=1 SV=2; Centrosomal protein of 170 kDa OS=Mus musculus OX=10090 GN=Cep170 PE=1 SV=1 0 2 2 0.8058 0 1 1 1 857.41724 1713.8272 1713.82749 -0.17 -0.00015 0/0 0 0 3469342.25 HCD 30 MS2 0 155.3 110 46.8638 12284 12284 12275 QEplus033719.raw F4 159.2 142.8 171.5 111 215.8 131.5 85 5.2 1 FALSE 1.14E-05 3.50E-15 2.843 -250 48380 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQPSDNAPEK [K].aQPSDNAPEk.[G] N-Term(TMT6plex); K10(TMT6plex) 4 A0A3Q4EBK4 Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1 Q6P1B9; O08539-2; A0A3Q4EBK4; O08539 Bin1 protein OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Isoform 2 of Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1; Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1 0 3 3 0.6955 0 1 1 1 505.61227 1514.82227 1514.82149 0.51 0.00026 0/0 0 0 33465916 HCD 30 MS2 20.25794 755.6 59.159 46.8661 12285 12285 12275 QEplus033719.raw F4 855.3 554.5 856.8 653.2 762.5 851.1 337 3.81 1 FALSE 1.14E-05 6.51E-07 1.273 -250 48389 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IREEYPDR [K].iREEYPDR.[I] N-Term(TMT6plex) 11 Q7TMM9; P99024; P68372; Q9CWF2; Q3UMM1 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1;Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=1 SV=1 Q7TMM9; Q9CVR0; ENSEMBL:ENSBTAP00000025008; A2AQ07; Q3U9U3; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2; Q3UMM1 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; (Bos taurus) hypothetical protein; Tubulin beta-1 chain OS=Mus musculus OX=10090 GN=Tubb1 PE=1 SV=1; Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1; Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=1 SV=1 1 3 3 0.6267 0 1 1 1 436.23676 1306.69571 1306.69528 0.33 0.00014 0/0 0 0 70471944 HCD 30 MS2 11.91707 286.2 14.209 46.8734 12287 12287 12286 QEplus033719.raw F4 292.3 255.7 301.4 250.8 322.9 294.3 278 3.75 5 TRUE 4.43E-05 0.001575 0.621 -250 48391 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TENAGDQHGGGGGGGSGAAGGGGGENYDDPHK [K].tENAGDQHGGGGGGGSGAAGGGGGENYDDPHk.[T] N-Term(TMT6plex); K32(TMT6plex) 4 G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 Q8R081; Q8BI42; Q3UMT7; G5E924 Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 0 4 4 0.8981 0 1 1 1 825.37457 3298.47646 3298.47457 0.57 0.00047 0/0 0 0 15315969 HCD 30 MS2 7.378395 193.6 110 46.8759 12288 12288 12286 QEplus033719.raw F4 196.9 178.7 217.9 173.8 269.7 124.6 45 10.7 1 FALSE 1.14E-05 6.31E-16 6.9 -250 48397 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTGFCATR [K].tTGFcATR.[R] N-Term(TMT6plex); C5(Carbamidomethyl) 2 B1AWB9; O88207-2 "Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1;Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1" B1AWB9; O88207-2 "Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1; Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1" 0 2 2 0.692 0 1 1 1 571.7959 1142.58452 1142.58256 1.72 0.00098 0/0 0 0 37447252 HCD 30 MS2 38.6287 848.4 57.687 46.8804 12290 12290 12286 QEplus033719.raw F4 860.3 660.7 951.7 655.8 1078 883.9 79 2.5 2 FALSE 1.14E-05 0.0005811 0.709 -250 48413 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENGAYDAK [K].eNGAYDAk.[H] N-Term(TMT6plex); K8(TMT6plex) 3 Q3UQL2 COP9 signalosome complex subunit 3 OS=Mus musculus OX=10090 GN=Cops3 PE=1 SV=1 Q3UQL2; Q8BX58; F6YCA7 COP9 signalosome complex subunit 3 OS=Mus musculus OX=10090 GN=Cops3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; COP9 signalosome complex subunit 3 (Fragment) OS=Mus musculus OX=10090 GN=Cops3 PE=1 SV=1 0 2 2 0.5534 0 1 1 1 663.35858 1325.70989 1325.71015 -0.2 -0.00013 0/0 0 0 2861692.25 HCD 30 MS2 29.31577 343.7 110 46.8879 12293 12293 12286 QEplus033719.raw F4 411.5 271.1 358.9 319.5 369.8 331.3 256 2.53 1 FALSE 1.14E-05 0.0001374 0.831 -250 48433 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CRPTTQEIVR [K].cRPTTQEIVR.[C] N-Term(TMT6plex); C1(Carbamidomethyl) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 3 3 0.4692 0 1 1 1 496.94342 1488.81571 1488.81541 0.2 0.0001 0/0 0 0 35864520 HCD 30 MS2 53.15289 534.3 20.224 46.895 12296 12296 12286 QEplus033719.raw F4 605.9 403.7 605.9 413.9 535.6 641 317 4.22 2 FALSE 4.43E-05 0.00156 0.622 -250 48441 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGRPQEPTPAK [R].eGRPQEPTPAk.[R] N-Term(TMT6plex); K11(TMT6plex) 2 Q8BTI8 Serine/arginine repetitive matrix protein 2 OS=Mus musculus OX=10090 GN=Srrm2 PE=1 SV=3 Q8BTI8; Q8BTI8-2 Serine/arginine repetitive matrix protein 2 OS=Mus musculus OX=10090 GN=Srrm2 PE=1 SV=3; Isoform 2 of Serine/arginine repetitive matrix protein 2 OS=Mus musculus OX=10090 GN=Srrm2 0 3 3 0.7057 0 1 1 1 556.65491 1667.95017 1667.94809 1.25 0.00069 0/0 0 0 16337471 HCD 30 MS2 3.865448 697.7 110 46.9022 12298 12298 12297 QEplus033719.raw F4 683.9 663 826 489.1 785.7 738.4 402 2.99 1 FALSE 1.14E-05 1.84E-07 1.377 -250 48446 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TENAGDQHGGGGGGGSGAAGGGGGENYDDPHK [K].tENAGDQHGGGGGGGSGAAGGGGGENYDDPHk.[T] N-Term(TMT6plex); K32(TMT6plex) 4 G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 Q8R081; Q8BI42; Q3UMT7; G5E924 Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 0 5 5 0.876 0 1 1 1 660.50177 3298.47974 3298.47457 1.57 0.00103 0/0 0 0 4799964 HCD 30 MS2 7.001432 116.4 110 46.9048 12299 12299 12297 QEplus033719.raw F4 129.4 103.3 123.3 105.4 138.6 98.6 46 6.13 1 FALSE 1.14E-05 6.31E-16 3.557 -250 48452 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MAAADSVQQR [K].mAAADSVQQR.[R] N-Term(TMT6plex) 6 E9PUK6 Serine/arginine repetitive matrix protein 1 OS=Mus musculus OX=10090 GN=Srrm1 PE=1 SV=1 E9PUK6; Q52KI8-2; E9QKA4; A2A8V8; Q52KI8; A2A8V9 Serine/arginine repetitive matrix protein 1 OS=Mus musculus OX=10090 GN=Srrm1 PE=1 SV=1; Isoform 2 of Serine/arginine repetitive matrix protein 1 OS=Mus musculus OX=10090 GN=Srrm1; Serine/arginine repetitive matrix protein 1 OS=Mus musculus OX=10090 GN=Srrm1 PE=1 SV=1; Serine/arginine repetitive matrix protein 1 OS=Mus musculus OX=10090 GN=Srrm1 PE=1 SV=1; Serine/arginine repetitive matrix protein 1 OS=Mus musculus OX=10090 GN=Srrm1 PE=1 SV=2; Serine/arginine repetitive matrix protein 1 OS=Mus musculus OX=10090 GN=Srrm1 PE=1 SV=1 0 2 2 0.6 0 1 1 1 653.34302 1305.67876 1305.67825 0.39 0.00025 0/0 0 0 14218167 HCD 30 MS2 0 531.6 110 46.9095 12301 12301 12297 QEplus033719.raw F4 511.8 549 613 356.9 647.8 511.4 248 3.6 1 FALSE 1.14E-05 3.82E-06 1.127 -250 48469 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTQVNEATK [R].qTQVNEATk.[A] N-Term(TMT6plex); K9(TMT6plex) 2 Q8CCF0 U4/U6 small nuclear ribonucleoprotein Prp31 OS=Mus musculus OX=10090 GN=Prpf31 PE=1 SV=3 Q8CCF0; Q8CCF0-2 U4/U6 small nuclear ribonucleoprotein Prp31 OS=Mus musculus OX=10090 GN=Prpf31 PE=1 SV=3; Isoform 2 of U4/U6 small nuclear ribonucleoprotein Prp31 OS=Mus musculus OX=10090 GN=Prpf31 0 2 2 0.2175 0 1 1 1 738.92578 1476.84429 1476.84223 1.39 0.00103 0/0 0 0 7333879 HCD 30 MS2 0 358.3 110 46.9145 12303 12303 12297 QEplus033719.raw F4 383.6 326 359.4 269 496 315.5 479 3.77 1 FALSE 1.14E-05 1.68E-06 1.195 -250 48477 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYNECIR [K].nYNEcIR.[H] N-Term(TMT6plex); C5(Carbamidomethyl) 1 Q3UE37 Ubiquitin-conjugating enzyme E2 Z OS=Mus musculus OX=10090 GN=Ube2z PE=1 SV=2 Q3UE37 Ubiquitin-conjugating enzyme E2 Z OS=Mus musculus OX=10090 GN=Ube2z PE=1 SV=2 0 2 2 0.5123 0 1 1 1 599.29767 1197.58806 1197.58837 -0.26 -0.00016 0/0 0 0 7022484 HCD 30 MS2 33.37233 573.6 110 46.9171 12304 12304 12297 QEplus033719.raw F4 632.5 500.9 607.5 507.8 662.4 530.7 103 2.44 1 FALSE 0.001335 0.0184 0.296 -250 48491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGVGSPK [K].eGVGSPk.[L] N-Term(TMT6plex); K7(TMT6plex) 4 A2AN08 E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1 A2AN08-3; A2AN08-4; A2AN08-5; A2AN08 Isoform 3 of E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4; Isoform 4 of E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4; Isoform 5 of E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4; E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1 0 2 2 0.2289 0 1 1 1 566.34283 1131.67839 1131.67739 0.88 0.0005 0/0 0 0 4546386.5 HCD 30 MS2 54.12965 860.2 110 46.9221 12306 12306 12297 QEplus033719.raw F4 1088.5 671 860.6 713.6 923.6 904.1 390 1.66 1 FALSE 0.004228 0.07778 0.067 -250 48498 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLQSIGTENTEENRR [K].rLQSIGTENTEENRR.[F] N-Term(TMT6plex) 9 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 A0A0U1RPT5; D3YWI1; A0A0U1RPN8; A6ZI47; D3YV98; D3Z510; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart2 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=2; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 2 4 4 0.5312 0 1 1 1 508.77496 2032.07802 2032.07329 2.33 0.00118 0/0 0 0 2585137 HCD 30 MS2 39.43962 331.3 110 46.9246 12307 12307 12297 QEplus033719.raw F4 446.6 227.2 333.6 307.7 335.3 337.2 367 2.56 1 FALSE 1.14E-05 7.53E-05 0.881 -250 48512 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALVADSHPESER [R].aLVADSHPESER.[I] N-Term(TMT6plex) 4 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q3TTX2; Q62261; A0A0A0MQG2; Q62261-2 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 3 3 0.7608 0 1 1 1 513.93756 1539.79813 1539.79645 1.09 0.00056 0/0 0 0 24396016 HCD 30 MS2 23.23047 578.1 84.882 46.9341 12310 12310 12308 QEplus033719.raw F4 602.7 404.4 657.5 639.7 478.5 685.9 231 5.1 2 FALSE 1.14E-05 7.83E-09 1.637 -250 48521 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TASDMVSTSR [R].tASDMVSTSR.[I] N-Term(TMT6plex) 4 Q9D8W5 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=4 Q3U8F5; Q9D8W5; Q3TRH2; Q9CSW4 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd12 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=4; 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Psmd12 PE=2 SV=1 0 2 2 0.6692 0 1 1 1 642.32697 1283.64665 1283.64628 0.29 0.00019 0/0 0 0 7698520.5 HCD 30 MS2 0 487 110 46.9367 12311 12311 12308 QEplus033719.raw F4 492.4 416.6 549.2 427.3 481.4 554.9 129 3.96 1 FALSE 1.14E-05 2.76E-07 1.343 -250 48533 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYPHLR [R].sYPHLR.[R] N-Term(TMT6plex) 7 P14824; Q99JX6; B7STB7 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3;Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1;Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 P14824; F8WIT2; Q3UI56; Q3TUI1; Q99JX6; Q3UDK4; B7STB7 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 0 2 2 0.2526 0 1 1 1 501.29041 1001.57353 1001.57298 0.55 0.00028 0/0 0 0 6590125.5 HCD 30 MS2 59.85737 755.5 110 46.9417 12313 12313 12308 QEplus033719.raw F4 782.3 595.6 769 778.4 839 769 237 1.94 3 FALSE 0.005214 0.08904 0.037 -250 48550 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLPQESEEQR [R].sLPQESEEQR.[T] N-Term(TMT6plex) 1 Q80WW9 DDRGK domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ddrgk1 PE=1 SV=2 Q80WW9 DDRGK domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ddrgk1 PE=1 SV=2 0 2 2 0.6804 0 1 1 1 716.36761 1431.72795 1431.7277 0.17 0.00013 0/0 0 0 3001041 HCD 30 MS2 0 185.2 110 46.9492 12316 12316 12308 QEplus033719.raw F4 178.4 158.2 187.8 169.3 210.8 206.5 196 3.41 1 FALSE 1.14E-05 3.61E-08 1.511 -250 48560 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYQQCVQK [K].rYQQcVQk.[A] N-Term(TMT6plex); C5(Carbamidomethyl); K8(TMT6plex) 1 Q9D8Z2 TP53-regulated inhibitor of apoptosis 1 OS=Mus musculus OX=10090 GN=Triap1 PE=1 SV=1 Q9D8Z2 TP53-regulated inhibitor of apoptosis 1 OS=Mus musculus OX=10090 GN=Triap1 PE=1 SV=1 1 3 3 0.4955 0 1 1 1 523.29651 1567.87497 1567.8779 -1.87 -0.00098 0/0 0 0 5433453 HCD 30 MS2 0 624.8 110 46.954 12318 12318 12308 QEplus033719.raw F4 656.5 480.1 639.6 590.1 692.8 689.6 348 3.35 1 FALSE 1.14E-05 1.76E-05 1.001 -250 48566 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MFGGSGTSSRPSSNR [R].mFGGSGTSSRPSSNR.[S] N-Term(TMT6plex) 8 Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; A2AKJ2; Q3U6S1; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 3 3 0.7147 0 1 1 1 586.2926 1756.86325 1756.8598 1.97 0.00115 0/0 0 0 1243916928 HCD 30 MS2 2.271778 389.3 1.592 46.9613 12320 12320 12319 QEplus033719.raw F4 370.8 424.7 458.3 252 513.8 316.1 146 3.82 1 FALSE 1.14E-05 1.16E-10 1.985 -250 48580 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPPGSAGSPGK [R].gPPGSAGSPGk.[D] N-Term(TMT6plex); K11(TMT6plex) 4 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087; Q60785; Q99LL6 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4; Alpha-1 type I procollagen (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1; Col1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1 0 2 2 0.6507 0 1 1 1 685.396 1369.78472 1369.78398 0.53 0.00037 0/0 0 0 69486424 HCD 30 MS2 37.41389 616.3 23.827 46.966 12322 12322 12319 QEplus033719.raw F4 605.9 654.5 699 258.8 872.4 607.3 324 2.72 1 FALSE 1.14E-05 1.36E-05 1.022 -250 48598 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATDPASPHIGR [R].aTDPASPHIGR.[S] N-Term(TMT6plex) 7 E9Q3Z5 Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1 E9Q3Z5; E3VVQ8; Q8K4L2; Q8K4L3; Q8K4L3-3; A0A1B0GS91; Q8C9L0 Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin muscle-specific isoform OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1; Archvillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Isoform 2 of Supervillin OS=Mus musculus OX=10090 GN=Svil; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Svil protein OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1 0 3 3 0.6978 0 1 1 1 450.91653 1350.73505 1350.73273 1.72 0.00077 0/0 0 0 8057345.5 HCD 30 MS2 50.41649 488 88.199 46.9708 12324 12324 12319 QEplus033719.raw F4 531.1 391.2 503.6 431.8 619.9 450.5 395 4.5 1 FALSE 1.14E-05 1.20E-08 1.602 -250 48624 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLDQCRDGK [K].dLDQcRDGk.[V] N-Term(TMT6plex); C5(Carbamidomethyl); K9(TMT6plex) 2 Q3UF30 Calpactin I light chain OS=Mus musculus OX=10090 GN=S100a10 PE=2 SV=1 Q3UF30; Q3TC45 Calpactin I light chain OS=Mus musculus OX=10090 GN=S100a10 PE=2 SV=1; Calpactin I light chain OS=Mus musculus OX=10090 GN=S100a10 PE=1 SV=1 1 3 3 0.5955 0 1 1 1 522.27612 1564.81382 1564.81536 -0.99 -0.00052 0/0 0 0 10415823 HCD 30 MS2 34.52281 1045.5 110 46.9808 12328 12328 12319 QEplus033719.raw F4 1144.8 1157.6 1049.8 611.1 1479.6 830.3 260 2.67 1 FALSE 0.0005556 0.008377 0.432 -250 48629 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCQPSDIENPR [K].gcQPSDIENPR.[G] N-Term(TMT6plex); C2(Carbamidomethyl) 2 P09055 Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 P09055-2; P09055 Isoform 2 of Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1; Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 0 2 2 0.8663 0 1 1 1 751.36688 1501.72649 1501.72666 -0.11 -0.00008 0/0 0 0 7420937 HCD 30 MS2 0 261.8 110 46.9833 12329 12329 12319 QEplus033719.raw F4 262.9 220.1 275.5 232.6 301.2 278.6 97 4.19 1 FALSE 1.14E-05 1.00E-07 1.427 -250 48632 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DEATPAAGNHPDSLR [R].dEATPAAGNHPDSLR.[G] N-Term(TMT6plex) 2 Q921T2 Torsin-1A-interacting protein 1 OS=Mus musculus OX=10090 GN=Tor1aip1 PE=1 SV=3 J3QQ40; Q921T2 Torsin-1A-interacting protein 1 OS=Mus musculus OX=10090 GN=Tor1aip1 PE=1 SV=1; Torsin-1A-interacting protein 1 OS=Mus musculus OX=10090 GN=Tor1aip1 PE=1 SV=3 0 3 3 0.8111 0 1 1 1 593.96613 1779.88382 1779.88231 0.85 0.00051 0/0 0 0 6349689 HCD 30 MS2 26.7312 376.5 110 46.9906 12331 12331 12330 QEplus033719.raw F4 485.8 260.7 449.9 366.1 289.9 406.7 163 5.77 1 FALSE 1.14E-05 6.31E-16 3.032 -250 48636 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EREEIEK [R].eREEIEk.[Q] N-Term(TMT6plex); K7(TMT6plex) 2 B2RTB0 PDGFA associated protein 1 OS=Mus musculus OX=10090 GN=Pdap1 PE=1 SV=1 Q1WWJ8; B2RTB0 Pdap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Pdap1 PE=2 SV=1; PDGFA associated protein 1 OS=Mus musculus OX=10090 GN=Pdap1 PE=1 SV=1 1 2 2 0.1907 0 1 1 2 695.90149 1390.7957 1390.79422 1.07 0.00074 0/0 0 0 5094741.5 HCD 30 MS2 0 225.4 110 46.9931 12332 12332 12330 QEplus033719.raw F4 242.6 171.9 218.8 208.3 298.3 212.8 517 1.94 1 FALSE 0.008019 0.1337 -0.065 -250 48644 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDEGIAYR [K].nDEGIAYR.[G] N-Term(TMT6plex) 3 Q61171 Peroxiredoxin-2 OS=Mus musculus OX=10090 GN=Prdx2 PE=1 SV=3 D3Z4A4; Q5M9N9; Q61171 Peroxiredoxin-2 (Fragment) OS=Mus musculus OX=10090 GN=Prdx2 PE=1 SV=8; Prdx2 protein OS=Mus musculus OX=10090 GN=Prdx2 PE=2 SV=1; Peroxiredoxin-2 OS=Mus musculus OX=10090 GN=Prdx2 PE=1 SV=3 0 2 2 0.4964 0 1 1 1 583.80457 1166.60185 1166.60032 1.32 0.00077 0/0 0 0 72973264 HCD 30 MS2 11.37262 563 17.42 46.9954 12333 12333 12330 QEplus033719.raw F4 601.6 478.9 638.7 485.3 641.1 532.4 157 2.76 1 FALSE 1.14E-05 0.0004124 0.739 -250 48650 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FRDQIR [R].fRDQIR.[L] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 1 3 3 0.2545 0 1 1 2 355.21191 1063.62119 1063.62099 0.18 0.00007 0/0 0 0 71829352 HCD 30 MS2 4.84237 345.8 19.426 46.9977 12334 12334 12330 QEplus033719.raw F4 301.4 327.2 508.2 315.6 243.8 378.4 183 2.79 2 FALSE 0.009694 0.1882 -0.124 -250 48661 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ACAEIAAQR [K].acAEIAAQR.[T] N-Term(TMT6plex); C2(Carbamidomethyl) 6 A2AN08 E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1 A2AN08-2; Z4YMA7; A2AN08-3; A2AN08-5; F6SSP6; A2AN08 Isoform 2 of E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4; E3 ubiquitin-protein ligase UBR4 (Fragment) OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1; Isoform 3 of E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4; Isoform 5 of E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4; E3 ubiquitin-protein ligase UBR4 (Fragment) OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1; E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1 0 2 2 0.465 0 1 1 1 609.82654 1218.6458 1218.64622 -0.35 -0.00021 0/0 0 0 9405301 HCD 30 MS2 37.01685 529.7 110 47.0024 12336 12336 12330 QEplus033719.raw F4 579.2 408.3 597.4 467.1 499.8 626.3 279 3.14 1 FALSE 1.14E-05 9.32E-07 1.243 -250 48694 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGGYKPTDK [R].hGGYkPTDk.[H] N-Term(TMT6plex); K5(TMT6plex); K9(TMT6plex) 3 P07310 Creatine kinase M-type OS=Mus musculus OX=10090 GN=Ckm PE=1 SV=1 P07310; A0A0J9YKD4; Q9D6U7 Creatine kinase M-type OS=Mus musculus OX=10090 GN=Ckm PE=1 SV=1; Creatine kinase OS=Mus musculus OX=10090 GN=Ckm PE=1 SV=1; Creatine kinase OS=Mus musculus OX=10090 GN=Ckm PE=2 SV=1 0 3 3 0.5202 0 1 1 1 564.00195 1689.99131 1689.98912 1.3 0.00073 0/0 0 0 7091488.5 HCD 30 MS2 46.48309 807 110 47.0124 12340 12340 12330 QEplus033719.raw F4 1184.1 184.8 561.8 1827.1 243.4 840.6 423 2.23 1 FALSE 1.14E-05 0.0005139 0.72 -250 48719 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSATVGPK [K].sSATVGPk.[A] N-Term(TMT6plex); K8(TMT6plex) 1 P27661 Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 P27661 Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 0 2 2 0.5854 0 1 1 1 602.86841 1204.72954 1204.73016 -0.51 -0.00031 0/0 0 0 5004641 HCD 30 MS2 40.35322 869.1 110 47.0272 12345 12345 12341 QEplus033719.raw F4 1035.1 746.5 983.7 647.9 982.9 818.7 526 2.46 1 FALSE 1.14E-05 0.0004552 0.73 -250 48729 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DEATPAAGNHPDSLR [R].dEATPAAGNHPDSLR.[G] N-Term(TMT6plex) 2 Q921T2 Torsin-1A-interacting protein 1 OS=Mus musculus OX=10090 GN=Tor1aip1 PE=1 SV=3 J3QQ40; Q921T2 Torsin-1A-interacting protein 1 OS=Mus musculus OX=10090 GN=Tor1aip1 PE=1 SV=1; Torsin-1A-interacting protein 1 OS=Mus musculus OX=10090 GN=Tor1aip1 PE=1 SV=3 0 3 3 0.809 0 1 1 1 593.96423 1779.87815 1779.88231 -2.34 -0.00139 0/0 0 0 4263961.5 HCD 30 MS2 72.85686 384.9 110 47.0297 12346 12346 12341 QEplus033719.raw F4 507.4 240.3 449.9 386.1 290.4 435.3 145 5.81 1 FALSE 1.14E-05 3.17E-15 2.851 -250 48732 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDTVANQGTK [K].tDTVANQGTk.[Q] N-Term(TMT6plex); K10(TMT6plex) 9 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5-6; Q99PL5-4; Q99PL5-7; Q99PL5; Q99PL5-8; Q99PL5-5; Q99PL5-3; Q99PL5-2 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Isoform RRp15a of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp41 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp15b of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; Isoform RRp10 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp16.8 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp47 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp61 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 0 2 2 0.5408 0 1 1 1 746.92242 1492.83757 1492.83714 0.29 0.00021 0/0 0 0 3572494.75 HCD 30 MS2 0 239.2 110 47.0323 12347 12347 12341 QEplus033719.raw F4 241.8 192.6 219.5 176.7 389.4 215.1 405 3.92 1 FALSE 1.14E-05 3.69E-09 1.699 -250 48752 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCQPSDIENPR [K].gcQPSDIENPR.[G] N-Term(TMT6plex); C2(Carbamidomethyl) 2 P09055 Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 P09055-2; P09055 Isoform 2 of Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1; Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 0 3 3 0.7775 0 1 1 1 501.24771 1501.72858 1501.72666 1.28 0.00064 0/0 0 0 8399659 HCD 30 MS2 70.18068 715.7 110 47.0395 12350 12350 12341 QEplus033719.raw F4 826.2 512.3 722.1 884.4 646.5 702.9 103 3.55 1 FALSE 1.14E-05 0.000107 0.851 -250 48756 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSQGPPGPTGNK [R].gSQGPPGPTGNk.[G] N-Term(TMT6plex); K12(TMT6plex) 1 Q8K4Q8 Collectin-12 OS=Mus musculus OX=10090 GN=Colec12 PE=1 SV=1 Q8K4Q8 Collectin-12 OS=Mus musculus OX=10090 GN=Colec12 PE=1 SV=1 0 3 3 0.726 0 1 1 1 518.96027 1554.86625 1554.86403 1.43 0.00074 0/0 0 0 7349754 HCD 30 MS2 61.55957 418.3 110 47.042 12351 12351 12341 QEplus033719.raw F4 496 437.1 518.4 276 379.6 402.5 402 4.89 1 FALSE 1.14E-05 1.32E-08 1.594 -250 48766 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDPPSADK [K].tDPPSADk.[T] N-Term(TMT6plex); K8(TMT6plex) 2 Q99LP6 "GrpE protein homolog 1, mitochondrial OS=Mus musculus OX=10090 GN=Grpel1 PE=1 SV=1" Q99LP6; Q3UTB8 "GrpE protein homolog 1, mitochondrial OS=Mus musculus OX=10090 GN=Grpel1 PE=1 SV=1; GrpE protein homolog OS=Mus musculus OX=10090 GN=Grpel1 PE=2 SV=1" 0 2 2 0.4812 0 1 1 1 644.86194 1288.7166 1288.7149 1.32 0.00085 0/0 0 0 8963235 HCD 30 MS2 31.15211 742 110 47.0519 12354 12354 12352 QEplus033719.raw F4 874.3 531.2 712.6 740.8 873.2 719.8 360 2.66 1 FALSE 0.001028 0.01342 0.353 -250 48779 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CGVISPR [K].cGVISPR.[-F] N-Term(TMT6plex); C1(Carbamidomethyl) 3 Q5M9M4 40S ribosomal protein S15a OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=1 D3Z712; F8WJ41; Q5M9M4 40S ribosomal protein S15a (Fragment) OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=2; 40S ribosomal protein S15a (Fragment) OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=1; 40S ribosomal protein S15a OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=1 0 2 2 0.4727 0 1 1 1 509.28958 1017.57189 1017.57127 0.61 0.00031 0/0 0 0 40055164 HCD 30 MS2 13.19303 661.3 27.186 47.0564 12356 12356 12352 QEplus033719.raw F4 730.2 569.2 750.1 534.4 678.8 705.2 341 2.56 1 FALSE 0.0008445 0.0117 0.378 -250 48786 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDFGAK [K].rDFGAk.[T] N-Term(TMT6plex); K6(TMT6plex) 8 Q5U222 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1 Q9CSD9; Q3UXW3; Q5U222; Q3V0Z8; Q921Y3; A1L333; Q61656; Q8BTS0 Helicase C-terminal domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Ddx5 protein OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 1 3 3 0.458 0 1 1 1 384.56967 1151.69446 1151.69371 0.65 0.00025 0/0 0 0 37951256 HCD 30 MS2 26.56058 438.9 26.598 47.0586 12357 12357 12352 QEplus033719.raw F4 543.4 324.2 479.4 363.3 517.1 406 179 2.62 1 FALSE 0.004181 0.07642 0.071 -250 48805 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQDAESLQR [K].kQDAESLQR.[A] N-Term(TMT6plex); K1(TMT6plex) 7 Q4FJN9; A0A0G2JDJ5 Fdps protein OS=Mus musculus OX=10090 GN=Fdps PE=1 SV=1;Farnesyl pyrophosphate synthase (Fragment) OS=Mus musculus OX=10090 GN=Fdps PE=4 SV=1 Q3TMB3; Q3US29; A0A0G2JEB3; Q4FJN9; Q5M8R9; A0A0G2JDJ5; A0A0G2JEA5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fdps PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fdps PE=2 SV=1; Farnesyl pyrophosphate synthase (Fragment) OS=Mus musculus OX=10090 GN=Fdps PE=4 SV=4; Fdps protein OS=Mus musculus OX=10090 GN=Fdps PE=1 SV=1; Farnesyl diphosphate synthetase OS=Mus musculus OX=10090 GN=Fdps PE=2 SV=1; Farnesyl pyrophosphate synthase (Fragment) OS=Mus musculus OX=10090 GN=Fdps PE=4 SV=1; Predicted gene 43738 OS=Mus musculus OX=10090 GN=Gm43738 PE=4 SV=1 1 3 3 0.4925 0 1 1 1 511.63226 1532.88224 1532.87968 1.67 0.00085 0/0 0 0 15234703 HCD 30 MS2 67.98852 989.6 68.874 47.0631 12359 12359 12352 QEplus033719.raw F4 1258.7 898.7 1010.1 717.4 988.3 1064.2 535 2.66 2 FALSE 0.0002518 0.005207 0.496 -250 48819 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGEAGAQGAPGPAGPAGER [K].dGEAGAQGAPGPAGPAGER.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 2 2 0.8135 0 1 1 1 947.4671 1893.92693 1893.92523 0.89 0.00085 0/0 0 0 10855799 HCD 30 MS2 0 210.3 110 47.0705 12362 12362 12352 QEplus033719.raw F4 193 182.4 267.2 177.9 194.9 246.4 145 6.22 1 FALSE 1.14E-05 6.31E-16 4.153 -250 48824 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGDSCESIIRR [R].qGDScESIIRR.[L] N-Term(TMT6plex); C5(Carbamidomethyl) 3 Q8BMJ2 "Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2" Q6ZPT2; Q8BMJ2; Q99JK2 "Leucyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1; Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2; Lars protein OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1" 1 3 3 0.6043 0 1 1 1 517.27069 1549.79752 1549.79541 1.36 0.0007 0/0 0 0 11363819 HCD 30 MS2 33.02561 605.8 110 47.0803 12365 12365 12363 QEplus033719.raw F4 884.4 425.6 578.1 478.3 699.9 568.3 223 4.65 1 FALSE 1.14E-05 1.03E-10 1.995 -250 48830 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELAEEAAR [R].eLAEEAAR.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.4936 0 1 1 1 559.30676 1117.60625 1117.60507 1.06 0.00059 0/0 0 0 28097630 HCD 30 MS2 17.08175 553.8 65.168 47.0825 12366 12366 12363 QEplus033719.raw F4 549.1 464.7 582 488.9 624 614.3 261 3.12 2 FALSE 1.14E-05 5.29E-05 0.91 -250 48839 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTTDISTER [K].kTTDISTER.[L] N-Term(TMT6plex); K1(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 1 3 3 0.5992 0 1 1 1 503.62772 1508.86859 1508.86844 0.1 0.00005 0/0 0 0 28096132 HCD 30 MS2 10.82886 708.8 55.78 47.0848 12367 12367 12363 QEplus033719.raw F4 873.7 210 629.7 1085.9 274.8 1178.8 356 2.47 2 FALSE 4.43E-05 0.001607 0.619 -250 48857 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLQEGYENSR [R].gLQEGYENSR.[C] N-Term(TMT6plex) 1 Q6ZPJ3 (E3-independent) E2 ubiquitin-conjugating enzyme UBE2O OS=Mus musculus OX=10090 GN=Ube2o PE=1 SV=3 Q6ZPJ3 (E3-independent) E2 ubiquitin-conjugating enzyme UBE2O OS=Mus musculus OX=10090 GN=Ube2o PE=1 SV=3 0 2 2 0.5397 0 1 1 1 691.35022 1381.69316 1381.69092 1.62 0.00112 0/0 0 0 5342313 HCD 30 MS2 0 315.5 110 47.0923 12370 12370 12363 QEplus033719.raw F4 320.1 255.2 334.6 278.6 370 334.2 131 3.65 1 FALSE 1.14E-05 5.60E-06 1.095 -250 48865 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QYEMGECTR [R].qYEMGEcTR.[G] N-Term(TMT6plex); C7(Carbamidomethyl) 9 Q14C24 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 OS=Mus musculus OX=10090 GN=U2af1 PE=1 SV=1 G3UW94; Q14C24; E9Q1I7; Q8BGJ9; E9PUZ3; E9Q5Y2; A0A494B947; E9PWA1; A0A140LII6 Splicing factor U2AF 35 kDa subunit OS=Mus musculus OX=10090 GN=U2af1 PE=1 SV=1; U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 OS=Mus musculus OX=10090 GN=U2af1 PE=1 SV=1; Splicing factor U2AF 26 kDa subunit OS=Mus musculus OX=10090 GN=U2af1l4 PE=1 SV=1; Splicing factor U2AF 26 kDa subunit OS=Mus musculus OX=10090 GN=U2af1l4 PE=1 SV=1; Splicing factor U2AF 26 kDa subunit OS=Mus musculus OX=10090 GN=U2af1l4 PE=1 SV=1; Splicing factor U2AF 26 kDa subunit OS=Mus musculus OX=10090 GN=U2af1l4 PE=1 SV=1; Splicing factor U2AF 35 kDa subunit (Fragment) OS=Mus musculus OX=10090 GN=U2af1 PE=1 SV=1; Splicing factor U2AF 26 kDa subunit (Fragment) OS=Mus musculus OX=10090 GN=U2af1l4 PE=1 SV=2; Splicing factor U2AF 26 kDa subunit OS=Mus musculus OX=10090 GN=U2af1l4 PE=1 SV=1 0 2 2 0.8268 0 1 1 1 701.81897 1402.63066 1402.62925 1.01 0.00071 0/0 0 0 2336332.25 HCD 30 MS2 22.98169 212.8 110 47.0948 12371 12371 12363 QEplus033719.raw F4 208.5 206.2 231.7 172 251.5 207.2 21 3.06 1 FALSE 3.35E-05 0.001347 0.635 -250 48882 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRGEVASDAK [K].vRGEVASDAk.[RS] N-Term(TMT6plex); K10(TMT6plex) 2 P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 A0A2R8VHJ0; P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=1; Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 1 3 3 0.4669 0 1 1 1 497.29639 1489.87461 1489.87386 0.5 0.00025 0/0 0 0 16661117 HCD 30 MS2 49.02385 827.1 59.675 47.1067 12375 12375 12374 QEplus033719.raw F4 871.1 652.7 833 726.3 971.8 908 459 3.32 1 FALSE 1.14E-05 1.20E-06 1.222 -250 48889 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLDQCRDGK [K].dLDQcRDGk.[V] N-Term(TMT6plex); C5(Carbamidomethyl); K9(TMT6plex) 2 Q3UF30 Calpactin I light chain OS=Mus musculus OX=10090 GN=S100a10 PE=2 SV=1 Q3UF30; Q3TC45 Calpactin I light chain OS=Mus musculus OX=10090 GN=S100a10 PE=2 SV=1; Calpactin I light chain OS=Mus musculus OX=10090 GN=S100a10 PE=1 SV=1 1 2 2 0.6756 0 1 1 1 782.9126 1564.81792 1564.81536 1.63 0.00128 0/0 0 0 9998007 HCD 30 MS2 8.491838 375.1 110 47.1092 12376 12376 12374 QEplus033719.raw F4 359.7 439 407.6 211.5 561.4 271.1 280 2.62 1 FALSE 1.14E-05 0.0007217 0.691 -250 48927 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQDAESLQR [K].kQDAESLQR.[A] N-Term(TMT6plex); K1(TMT6plex) 7 Q4FJN9; A0A0G2JDJ5 Fdps protein OS=Mus musculus OX=10090 GN=Fdps PE=1 SV=1;Farnesyl pyrophosphate synthase (Fragment) OS=Mus musculus OX=10090 GN=Fdps PE=4 SV=1 Q3TMB3; Q3US29; A0A0G2JEB3; Q4FJN9; Q5M8R9; A0A0G2JDJ5; A0A0G2JEA5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fdps PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fdps PE=2 SV=1; Farnesyl pyrophosphate synthase (Fragment) OS=Mus musculus OX=10090 GN=Fdps PE=4 SV=4; Fdps protein OS=Mus musculus OX=10090 GN=Fdps PE=1 SV=1; Farnesyl diphosphate synthetase OS=Mus musculus OX=10090 GN=Fdps PE=2 SV=1; Farnesyl pyrophosphate synthase (Fragment) OS=Mus musculus OX=10090 GN=Fdps PE=4 SV=1; Predicted gene 43738 OS=Mus musculus OX=10090 GN=Gm43738 PE=4 SV=1 1 2 2 0.6212 0 1 1 1 766.94287 1532.87847 1532.87968 -0.79 -0.00061 0/0 0 0 3551409 HCD 30 MS2 30.6418 308.5 110 47.1238 12382 12382 12374 QEplus033719.raw F4 317.4 280.5 332.1 249.5 336.3 335.5 516 2.93 2 FALSE 1.14E-05 6.91E-05 0.888 -250 48934 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCAQGEGSMAK [K].ncAQGEGSMAk.[K] N-Term(TMT6plex); C2(Carbamidomethyl); K11(TMT6plex) 1 Q6ZPJ3 (E3-independent) E2 ubiquitin-conjugating enzyme UBE2O OS=Mus musculus OX=10090 GN=Ube2o PE=1 SV=3 Q6ZPJ3 (E3-independent) E2 ubiquitin-conjugating enzyme UBE2O OS=Mus musculus OX=10090 GN=Ube2o PE=1 SV=3 0 2 2 0.7673 0 1 1 1 805.90607 1610.80486 1610.80308 1.1 0.00089 0/0 0 0 2955626 HCD 30 MS2 0 205.3 110 47.1264 12383 12383 12374 QEplus033719.raw F4 234.8 152.1 206.7 186.4 231.4 220.1 162 4.34 1 FALSE 1.14E-05 7.77E-11 2.018 -250 48937 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGNLDNR [K].mGNLDNR.[I] N-Term(TMT6plex) 5 Q3U645 Uncharacterized protein OS=Mus musculus OX=10090 GN=Abcd3 PE=2 SV=1 Q3U645; A0A0G2JDI9; Q3UNS0; Q91VT3; P55096 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Abcd3 PE=2 SV=1; ATP-binding cassette sub-family D member 3 OS=Mus musculus OX=10090 GN=Abcd3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abcd3 PE=2 SV=1; ATP-binding cassette, sub-family D (ALD), member 3 OS=Mus musculus OX=10090 GN=Abcd3 PE=2 SV=1; ATP-binding cassette sub-family D member 3 OS=Mus musculus OX=10090 GN=Abcd3 PE=1 SV=2" 0 2 2 0.2239 0 1 1 1 524.77362 1048.53996 1048.54069 -0.7 -0.00036 0/0 0 0 2903594.5 HCD 30 MS2 21.18231 631.7 110 47.1289 12384 12384 12374 QEplus033719.raw F4 762 541.6 633.2 489.1 674.4 689.8 158 2.01 1 FALSE 0.005756 0.09658 0.016 -250 48946 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIDVDR [R].sIDVDR.[G] N-Term(TMT6plex) 9 A2ATP6 Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=2 A2ATP6; Q8C854-1; A7UQY4; Q8C854-3; F6XJA1; A2ATP5; G8JL68; Q8C854; Q8C854-2 Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=2; Isoform 3 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Isoform 2 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2; Myelin expression factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Isoform 4 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 0 2 2 0.2105 0 1 1 1 467.26413 933.52098 933.52028 0.76 0.00035 0/0 0 0 12821676 HCD 30 MS2 47.53018 1023.6 110 47.1362 12386 12386 12385 QEplus033719.raw F4 1069.1 936.5 1110.6 734.6 1251.7 1039.4 171 2.09 1 FALSE 0.002056 0.03693 0.186 -250 48955 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRPGQQIATCVR [K].qRPGQQIATcVR.[L] N-Term(TMT6plex); C10(Carbamidomethyl) 9 Q3U1S6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1 A0A0G2JF72; Q3U1S6; Q8JZN2; Q8R3R1; Q3U672; Q3U4S7; Q3TXH7; Q80TP8; Q05C63 Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Csde1 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; MKIAA0885 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Csde1 protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1 0 3 3 0.6197 0 1 1 1 548.30542 1642.90171 1642.90087 0.51 0.00028 0/0 0 0 17714718 HCD 30 MS2 31.89133 710.2 110 47.1387 12387 12387 12385 QEplus033719.raw F4 822.8 534.8 770.8 574.2 751.6 807.2 364 3.55 1 FALSE 1.14E-05 7.83E-10 1.827 -250 48959 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGEAGAQGAPGPAGPAGER [K].dGEAGAQGAPGPAGPAGER.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 3 3 0.8037 0 1 1 1 631.98041 1893.92667 1893.92523 0.76 0.00048 0/0 0 0 52953996 HCD 30 MS2 4.218457 155.6 29.226 47.1409 12388 12388 12385 QEplus033719.raw F4 141.4 119.3 162.4 152.8 181.3 176.3 142 6.47 1 FALSE 1.14E-05 6.31E-16 2.999 -250 48968 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVTEQGHELSNEER [K].aVTEQGHELSNEER.[N] N-Term(TMT6plex) 3 Q9CQV8 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3 Q9CQV8-2; Q9CQV8; A2A5N1 Isoform Short of 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab; 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3; 14-3-3 protein beta/alpha (Fragment) OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=1 0 3 3 0.8078 0 1 1 1 609.97278 1827.90378 1827.90343 0.19 0.00012 0/0 0 0 19405834 HCD 30 MS2 19.29773 470 95.502 47.1455 12390 12390 12385 QEplus033719.raw F4 532.1 399.6 534.6 386.2 523.5 444 174 6.19 1 FALSE 1.14E-05 6.31E-16 3.066 -250 48974 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DEDECAEGKHDCTEK [K].dEDEcAEGkHDcTEk.[Q] N-Term(TMT6plex); C5(Carbamidomethyl); K9(TMT6plex); C12(Carbamidomethyl); K15(TMT6plex) 2 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 1 4 4 0.73 0 1 1 1 628.29871 2510.17299 2510.17423 -0.49 -0.00031 0/0 0 0 12699361 HCD 30 MS2 2.962113 534.3 110 47.148 12391 12391 12385 QEplus033719.raw F4 564.8 309.4 635.6 707.7 307.8 680.8 80 5.63 1 FALSE 1.14E-05 6.24E-12 2.226 -250 48979 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNTDPYK [R].nNTDPYk.[R] N-Term(TMT6plex); K7(TMT6plex) 4 Q8BJ71 Nuclear pore complex protein Nup93 OS=Mus musculus OX=10090 GN=Nup93 PE=1 SV=1 Q8BJ71; Q3TFC8; Q8BJ71-2; A0A1D5RLQ0 Nuclear pore complex protein Nup93 OS=Mus musculus OX=10090 GN=Nup93 PE=1 SV=1; Nuclear pore complex protein Nup93 (Fragment) OS=Mus musculus OX=10090 GN=Nup93 PE=2 SV=1; Isoform 2 of Nuclear pore complex protein Nup93 OS=Mus musculus OX=10090 GN=Nup93; Nuclear pore complex protein Nup93 OS=Mus musculus OX=10090 GN=Nup93 PE=1 SV=1 0 2 2 0.5 0 1 1 1 655.36194 1309.7166 1309.71524 1.04 0.00068 0/0 0 0 9132711 HCD 30 MS2 21.19525 732.6 110 47.1505 12392 12392 12385 QEplus033719.raw F4 785.7 641.1 756.8 551.9 1003.5 656.5 299 1.6 1 FALSE 0.001248 0.01704 0.309 -250 48995 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRVPTER [K].vRVPTER.[L] N-Term(TMT6plex) 3 Q6P549 "Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Mus musculus OX=10090 GN=Inppl1 PE=1 SV=1" A0A1B0GR64; A0A087WPT7; Q6P549 "Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 (Fragment) OS=Mus musculus OX=10090 GN=Inppl1 PE=1 SV=1; Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Inppl1 PE=1 SV=1; Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Mus musculus OX=10090 GN=Inppl1 PE=1 SV=1" 1 3 3 0.2735 0 1 1 1 362.5593 1085.66333 1085.66286 0.44 0.00016 0/0 0 0 6347518 HCD 30 MS2 18.79172 423.1 110 47.1555 12394 12394 12385 QEplus033719.raw F4 591.1 286.1 480 386.6 323.6 471 181 2.45 1 FALSE 0.006363 0.1029 -0.001 -250 49004 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSEAADDSFR [R].tSEAADDSFR.[F] N-Term(TMT6plex) 2 Q8VHY0 Chondroitin sulfate proteoglycan 4 OS=Mus musculus OX=10090 GN=Cspg4 PE=1 SV=3 Q8VHY0-3; Q8VHY0 Isoform 3 of Chondroitin sulfate proteoglycan 4 OS=Mus musculus OX=10090 GN=Cspg4; Chondroitin sulfate proteoglycan 4 OS=Mus musculus OX=10090 GN=Cspg4 PE=1 SV=3 0 2 2 0.5865 0 1 1 1 664.32062 1327.63396 1327.63274 0.92 0.00061 0/0 0 0 3506921 HCD 30 MS2 43.4174 401.8 110 47.158 12395 12395 12385 QEplus033719.raw F4 434 340 430.9 349.6 485.1 371.3 58 3.12 1 FALSE 1.14E-05 4.71E-06 1.11 -250 49010 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGIHEDSTNR [K].lGIHEDSTNR.[R] N-Term(TMT6plex) 4 Q71LX8 Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q811H6; Q80YC2; Q71LX8; E9Q0C3 Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; Heat shock protein HSP 90-beta (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 0 3 3 0.7047 0 1 1 1 457.57944 1370.72376 1370.72256 0.88 0.0004 0/0 0 0 219311104 HCD 30 MS2 15.42769 229 5.373 47.1653 12397 12397 12396 QEplus033719.raw F4 340.4 156.4 228.3 157.4 273.3 218.5 180 3.59 1 FALSE 1.14E-05 3.36E-06 1.137 -250 49018 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQASVR [K].lQASVR.[GSC] N-Term(TMT6plex) 10 Q61335; Q3UHT6 B-cell receptor-associated protein 31 OS=Mus musculus OX=10090 GN=Bcap31 PE=1 SV=4;3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1 Q61335; Q99P21; A8Y5N1; Q3UHT6; P19096; Q3TB22; A0A0U1RNJ1; Q762C9; E9Q9J3; Q3U9U5 B-cell receptor-associated protein 31 OS=Mus musculus OX=10090 GN=Bcap31 PE=1 SV=4; Adenine DNA glycosylase OS=Mus musculus OX=10090 GN=Mutyh PE=1 SV=2; Adenine DNA glycosylase (Fragment) OS=Mus musculus OX=10090 GN=Mutyh PE=1 SV=1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2; Fatty acid synthase (Fragment) OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=1; MutY homolog alpha (Fragment) OS=Mus musculus OX=10090 GN=Mutyh PE=2 SV=1; Adenine DNA glycosylase OS=Mus musculus OX=10090 GN=Mutyh PE=1 SV=1; B-cell receptor-associated protein OS=Mus musculus OX=10090 GN=Bcap31 PE=2 SV=1 0 2 2 0.0957 0 1 1 1 451.78534 902.5634 902.56208 1.46 0.00066 0/0 0 0 85218008 HCD 30 MS2 42.73345 667.4 12.13 47.1676 12398 12398 12396 QEplus033719.raw F4 892.3 529.5 676.8 514.1 669.7 721.9 102 1.88 2 FALSE 0.00403 0.07445 0.076 -250 49038 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAQDQIK [R].qAQDQIk.[S] N-Term(TMT6plex); K7(TMT6plex) 5 Q4KML7 Ezrin OS=Mus musculus OX=10090 GN=Ezr PE=1 SV=1 Q8CBU4; Q3UXR4; Q4KML7; Q3TCP5; Q3UL48 FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; Ezrin OS=Mus musculus OX=10090 GN=Ezr PE=1 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1 0 2 2 0.3815 0 1 1 1 644.88611 1288.76494 1288.76252 1.88 0.00121 0/0 0 0 14981879 HCD 30 MS2 48.03212 1187.2 86.962 47.1721 12400 12400 12396 QEplus033719.raw F4 1308.7 906.4 1170.1 1204 1331.5 1202.7 467 1.73 1 FALSE 0.001074 0.01392 0.346 -250 49070 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVTEQGHELSNEER [K].aVTEQGHELSNEER.[N] N-Term(TMT6plex) 3 Q9CQV8 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3 Q9CQV8-2; Q9CQV8; A2A5N1 Isoform Short of 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab; 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3; 14-3-3 protein beta/alpha (Fragment) OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=1 0 2 2 0.7945 0 1 1 1 914.45648 1827.90569 1827.90343 1.23 0.00113 0/0 0 0 2570475.5 HCD 30 MS2 0 171.9 110 47.1872 12406 12406 12396 QEplus033719.raw F4 190.2 159 175.8 139.7 228.4 138.5 184 5.79 1 FALSE 1.14E-05 6.31E-16 2.997 -250 49086 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFNDGTDEK [K].rFNDGTDEk.[K] N-Term(TMT6plex); K9(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 1 3 3 0.5518 0 1 1 1 513.94403 1539.81754 1539.81674 0.52 0.00027 0/0 0 0 83739472 HCD 30 MS2 7.252682 854.5 19.4 47.199 12410 12410 12407 QEplus033719.raw F4 972.6 579.4 853.7 1002.5 724 995 309 4.15 1 FALSE 1.14E-05 5.72E-08 1.473 -250 49096 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATEVTVAR [K].aTEVTVAR.[Q] N-Term(TMT6plex) 14 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 Q9QXZ0-3; B1ARU4; E9QA63; E9QNP1; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8; Q8C8N4 Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1 0 2 2 0.4747 0 1 1 1 538.31952 1075.63176 1075.63089 0.81 0.00044 0/0 0 0 32685778 HCD 30 MS2 52.83726 746 25.531 47.2012 12411 12411 12407 QEplus033719.raw F4 900.4 486.3 872.7 711 536.3 969.1 189 2.17 3 FALSE 1.14E-05 0.0006117 0.705 -250 49111 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTIAPCQK [K].rTIAPcQk.[A] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 1 3 3 0.5427 0 1 1 1 477.95615 1431.85389 1431.85063 2.28 0.00109 0/0 0 0 17242410 HCD 30 MS2 12.42997 1204.7 101.561 47.2058 12413 12413 12407 QEplus033719.raw F4 1406.6 967.2 1257.3 1211.8 1141.9 1243.2 461 4.68 1 FALSE 1.14E-05 1.76E-08 1.57 -250 49118 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEVRPELGSR [K].gEVRPELGSR.[E] N-Term(TMT6plex) 6 E9QAI5 Aspartate carbamoyltransferase OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1 B2RQC6-2; E9QAI5; Q80VF8; B2RQC6; G3UWN2; Q6P9L1 Isoform 2 of CAD protein OS=Mus musculus OX=10090 GN=Cad; Aspartate carbamoyltransferase OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1; CAD protein (Fragment) OS=Mus musculus OX=10090 GN=Cad PE=2 SV=2; CAD protein OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1; CAD protein OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1; Cad protein (Fragment) OS=Mus musculus OX=10090 GN=Cad PE=2 SV=1 0 3 3 0.0324 2 2 2 443.58725 1328.7472 1328.74838 -0.89 -0.00039 0/0 0 0 17115136 HCD 30 MS2 20.53666 745.4 72.914 47.2081 12414 12414 12407 QEplus033719.raw F4 754.7 633.5 736.9 630.6 1023.1 693.4 344 2.69 1 FALSE 0.002878 0.0569 0.122 -250 49124 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQCEGIK [R].nQcEGIk.[K] N-Term(TMT6plex); C3(Carbamidomethyl); K7(TMT6plex) 1 Q6P5F9 Exportin-1 OS=Mus musculus OX=10090 GN=Xpo1 PE=1 SV=1 Q6P5F9 Exportin-1 OS=Mus musculus OX=10090 GN=Xpo1 PE=1 SV=1 0 2 2 0.5474 0 1 1 1 653.86511 1306.72295 1306.71894 3.07 0.002 0/0 0 0 11951475 HCD 30 MS2 8.439034 709.3 110 47.2106 12415 12415 12407 QEplus033719.raw F4 782.1 585.2 677 562.8 1042.9 605.9 347 2.85 1 FALSE 0.0002909 0.005972 0.479 -250 49130 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYTDVNTHRPR [R].vYTDVNTHRPR.[E] N-Term(TMT6plex) 6 Q60737 Casein kinase II subunit alpha OS=Mus musculus OX=10090 GN=Csnk2a1 PE=1 SV=2 Q60737; Q9D0E8; Q61177; Q6NSS6; A2ANR6; Q8CD20 Casein kinase II subunit alpha OS=Mus musculus OX=10090 GN=Csnk2a1 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csnk2a1 PE=2 SV=1; Casein kinase II alpha subunit OS=Mus musculus OX=10090 GN=Csnk2a1 PE=1 SV=1; Casein kinase II subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Csnk2a1 PE=1 SV=1; Casein kinase II subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Csnk2a1 PE=1 SV=1; Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Csnk2a1 PE=2 SV=1 0 3 3 0.6899 0 1 1 1 529.62579 1586.86283 1586.86005 1.75 0.00092 0/0 0 0 9087606 HCD 30 MS2 13.45236 612.9 110 47.2131 12416 12416 12407 QEplus033719.raw F4 633.5 559 668.5 515 675.8 625.8 338 4.74 1 FALSE 1.14E-05 2.40E-10 1.925 -250 49145 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MFGGSGTSSRPSSNR [R].mFGGSGTSSRPSSNR.[S] N-Term(TMT6plex) 8 Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; A2AKJ2; Q3U6S1; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.6485 0 1 1 1 878.9339 1756.86052 1756.8598 0.41 0.00036 0/0 0 0 11862491 HCD 30 MS2 9.130582 173.6 110 47.223 12419 12419 12418 QEplus033719.raw F4 166.6 186 195 132.1 203 158.9 134 2.93 1 FALSE 1.14E-05 1.62E-07 1.388 -250 49153 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGIPPDQQR [K].eGIPPDQQR.[LV] N-Term(TMT6plex) 18 P62984; P62983 Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2;Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2 E9Q5F6; P62984; Q922Z8; Q922B0; Q3TH47; Q5SX22; E9Q4P0; P62983; Q78XY9; E9Q9J0; Q8R0Z9; B0LAC2; Q8C2K3; Q8VC46; A5JUZ1; A0A0A6YW67; E9QNP0; P0CG50 Polyubiquitin-C (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=1; Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Polyubiquitin-B (Fragment) OS=Mus musculus OX=10090 GN=Ubb PE=4 SV=2; KxDL motif-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2; Ubiquitin B OS=Mus musculus OX=10090 GN=Ubb PE=2 SV=1; 60S ribosomal protein L40 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=3 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiquitin A-52 residue ribosomal protein fusion product 1 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubb-ps PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiqutin subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Predicted pseudogene 8797 OS=Mus musculus OX=10090 GN=Gm8797 PE=4 SV=1; 60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Polyubiquitin-C OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=2 0 2 2 0.6347 0 1 1 1 634.84369 1268.6801 1268.67963 0.37 0.00024 0/0 0 0 10809739 HCD 30 MS2 37.55146 698.8 110 47.2255 12420 12420 12418 QEplus033719.raw F4 669.1 552.8 720.8 641.4 850 758.8 289 2.71 2 FALSE 0.000108 0.003041 0.557 -250 49155 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFDEGK [R].rFDEGk.[L] N-Term(TMT6plex); K6(TMT6plex) 4 Q9DAW9 Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 Q9DAW9; A0A0G2JFI6; Q99JN5; A0A0G2JDV8 Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1; Calponin-3 (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=4; Cnn3 protein (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 1 3 3 0.3074 0 1 1 1 403.90491 1209.70017 1209.69919 0.81 0.00033 0/0 0 0 112186128 HCD 30 MS2 18.28671 669.2 10.223 47.2277 12421 12421 12418 QEplus033719.raw F4 856 490.7 742.6 551.6 842.7 531.5 282 2.7 1 FALSE 0.003015 0.05878 0.117 -250 49163 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVYDAHTK [K].qVYDAHTk.[E] N-Term(TMT6plex); K8(TMT6plex) 5 P49817 Caveolin-1 OS=Mus musculus OX=10090 GN=Cav1 PE=1 SV=1 H3BKG0; D3Z148; P49817-2; P49817; D3Z0J2 Caveolin-1 OS=Mus musculus OX=10090 GN=Cav1 PE=1 SV=1; Caveolin (Fragment) OS=Mus musculus OX=10090 GN=Cav1 PE=1 SV=2; Isoform 2 of Caveolin-1 OS=Mus musculus OX=10090 GN=Cav1; Caveolin-1 OS=Mus musculus OX=10090 GN=Cav1 PE=1 SV=1; Caveolin (Fragment) OS=Mus musculus OX=10090 GN=Cav1 PE=1 SV=1 0 3 3 0.6407 0 1 1 1 473.93863 1419.80133 1419.79963 1.2 0.00057 0/0 0 0 77144080 HCD 30 MS2 16.86637 653.6 15.193 47.23 12422 12422 12418 QEplus033719.raw F4 639.3 658.9 655.5 521.7 873.9 572.5 470 3.59 1 FALSE 1.14E-05 6.46E-05 0.893 -250 49171 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELTDEEAER [K].eLTDEEAER.[L] N-Term(TMT6plex) 1 O35685 Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1 O35685 Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1 0 2 2 0.2036 0 1 1 1 660.82855 1320.64983 1320.64806 1.34 0.00089 0/0 0 0 30208844 HCD 30 MS2 34.12523 505.6 37.899 47.2323 12423 12423 12418 QEplus033719.raw F4 508 445.9 543.3 435.6 595.8 505.2 103 3.88 1 FALSE 1.14E-05 2.00E-06 1.18 -250 49185 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYRDDIGR [R].vYRDDIGR.[N] N-Term(TMT6plex) 5 Q6A0C9 AP-2 complex subunit mu (Fragment) OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1 Q6A0C9; Q5FWI9; Q3TWV4; Q3TH69; Q3UCW9 AP-2 complex subunit mu (Fragment) OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1; AP-2 complex subunit mu OS=Mus musculus OX=10090 GN=Ap2m1 PE=1 SV=1; AP-2 complex subunit mu OS=Mus musculus OX=10090 GN=Ap2m1 PE=1 SV=1; AP-2 complex subunit mu OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1; MHD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1 1 3 3 0.355 0 1 1 1 408.2301 1222.67575 1222.67415 1.31 0.00053 0/0 0 0 9144147 HCD 30 MS2 55.89972 794.2 89.373 47.237 12425 12425 12418 QEplus033719.raw F4 857.4 733.7 829.2 656 850.6 838.1 398 2.62 1 FALSE 0.001177 0.01599 0.321 -250 49190 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVAEPQAQR [K].vVAEPQAQR.[V] N-Term(TMT6plex) 4 Q6A0A2 La-related protein 4B OS=Mus musculus OX=10090 GN=Larp4b PE=1 SV=2 Q6A0A2-3; Q6A0A2; A0A087WPU9; Q6A0A2-2 Isoform 3 of La-related protein 4B OS=Mus musculus OX=10090 GN=Larp4b; La-related protein 4B OS=Mus musculus OX=10090 GN=Larp4b PE=1 SV=2; La-related protein 4B (Fragment) OS=Mus musculus OX=10090 GN=Larp4b PE=4 SV=6; Isoform 2 of La-related protein 4B OS=Mus musculus OX=10090 GN=Larp4b 0 2 2 0.7187 0 1 1 1 613.85718 1226.70708 1226.70545 1.33 0.00081 0/0 0 0 7571979.5 HCD 30 MS2 0 419.5 110 47.2395 12426 12426 12418 QEplus033719.raw F4 433.2 366.6 452.5 331.9 462.9 469.8 256 3.27 1 FALSE 1.14E-05 1.76E-05 1.001 -250 49198 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTIAPCQK [K].rTIAPcQk.[A] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 1 2 2 0.4249 0 1 1 1 716.42853 1431.84978 1431.85063 -0.59 -0.00042 0/0 0 0 3510568.25 HCD 30 MS2 19.64671 246.7 110 47.242 12427 12427 12418 QEplus033719.raw F4 266.9 198.6 257.7 250.8 230.3 275.9 504 1.93 1 FALSE 0.006085 0.1 0.006 -250 49205 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSQGPPGPTGNK [R].gSQGPPGPTGNk.[G] N-Term(TMT6plex); K12(TMT6plex) 1 Q8K4Q8 Collectin-12 OS=Mus musculus OX=10090 GN=Colec12 PE=1 SV=1 Q8K4Q8 Collectin-12 OS=Mus musculus OX=10090 GN=Colec12 PE=1 SV=1 0 2 2 0.6084 0 1 1 1 777.93481 1554.86235 1554.86403 -1.08 -0.00084 0/0 0 0 3467368 HCD 30 MS2 0 246.1 110 47.2446 12428 12428 12418 QEplus033719.raw F4 202.3 287.9 331.2 187.6 226.7 240.7 384 3.83 1 FALSE 1.14E-05 1.23E-08 1.6 -250 49221 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVTAQDVR [K].kVTAQDVR.[K] N-Term(TMT6plex); K1(TMT6plex) 3 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4; Q3TZQ2 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 1 3 3 0.3763 0 1 1 1 458.95413 1374.84784 1374.84692 0.67 0.00031 0/0 0 0 164323456 HCD 30 MS2 26.39942 752.5 7.288 47.2566 12432 12432 12429 QEplus033719.raw F4 819.9 628.2 700.2 554.5 1118 694.3 496 2.87 1 FALSE 1.14E-05 0.0004719 0.727 -250 49233 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DCQLNAHK [R].dcQLNAHk.[D] N-Term(TMT6plex); C2(Carbamidomethyl); K8(TMT6plex) 3 Q5EBP9 Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 Q62318-2; Q5EBP9; Q3UDN8 Isoform 2 of Transcription intermediary factor 1-beta OS=Mus musculus OX=10090 GN=Trim28; Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 0 3 3 0.5881 0 1 1 1 481.93121 1443.77909 1443.77785 0.85 0.00041 0/0 0 0 23101312 HCD 30 MS2 19.18829 984.7 81.544 47.2611 12434 12434 12429 QEplus033719.raw F4 1078.3 854.8 1036.7 734.9 1238.2 965.3 299 3.86 1 FALSE 1.14E-05 5.31E-06 1.1 -250 49243 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FCENTQAGEGR [R].fcENTQAGEGR.[V] N-Term(TMT6plex); C2(Carbamidomethyl) 2 F8WHM5 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 F8WHM5; Q61543 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 0 2 2 0.8487 0 1 1 1 749.35217 1497.69707 1497.69536 1.14 0.00086 0/0 0 0 20642360 HCD 30 MS2 0 511.3 110 47.2636 12435 12435 12429 QEplus033719.raw F4 452.8 489.5 620.9 383.5 576.7 544.3 56 4.56 1 FALSE 1.14E-05 2.47E-07 1.353 -250 49257 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEADDLKR [R].gEADDLkR.[E] N-Term(TMT6plex); K7(TMT6plex) 6 Q8R5G0 Nidogen 2 protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1 Q8C6Z2; Q8R5G0; Q3US45; Q3TPN0; Q8CFA3; O88322 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen 2 protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen-2 OS=Mus musculus OX=10090 GN=NID-2 PE=4 SV=1; Nidogen-2 OS=Mus musculus OX=10090 GN=Nid2 PE=1 SV=2 1 3 3 0.3804 0 1 1 1 454.59821 1361.78006 1361.7789 0.85 0.00039 0/0 0 0 18379576 HCD 30 MS2 24.66534 852.9 48.354 47.2681 12437 12437 12429 QEplus033719.raw F4 801.3 865.2 1116.6 750.4 776.3 807.4 495 2.76 1 FALSE 0.001395 0.01992 0.282 -250 49262 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFNDGTDEK [K].rFNDGTDEk.[K] N-Term(TMT6plex); K9(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 1 2 2 0.4837 0 1 1 1 770.41364 1539.81999 1539.81674 2.11 0.00163 0/0 0 0 18355040 HCD 30 MS2 0 623.3 110 47.2707 12438 12438 12429 QEplus033719.raw F4 715.3 414.1 627.8 738.6 520.5 723.7 315 3.06 1 FALSE 0.00116 0.0155 0.327 -250 49272 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVTAQDVR [K].kVTAQDVR.[K] N-Term(TMT6plex); K1(TMT6plex) 3 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4; Q3TZQ2 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 1 2 2 0.3721 0 1 1 1 687.92755 1374.84783 1374.84692 0.66 0.00045 0/0 0 0 17666664 HCD 30 MS2 0 584.9 110 47.2732 12439 12439 12429 QEplus033719.raw F4 679.8 474.6 539.7 429.6 828.9 556.9 496 2.15 1 FALSE 2.26E-05 0.0009986 0.662 -250 49288 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DCMGDMDGR [R].dcMGDMDGR.[A] N-Term(TMT6plex); C2(Carbamidomethyl) 1 Q3U5N4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Adprh PE=1 SV=1 Q3U5N4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Adprh PE=1 SV=1 0 2 2 1 0 1 1 1 643.26282 1285.51836 1285.51726 0.86 0.00055 0/0 0 0 15136233 HCD 30 MS2 23.31239 739.2 110 47.283 12442 12442 12440 QEplus033719.raw F4 762.1 513.2 809.4 781.6 646 923 2 2.96 1 FALSE 1.14E-05 0.0001878 0.805 -250 49292 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YLHDESGLNRR [R].yLHDESGLNRR.[H] N-Term(TMT6plex) 7 P42208 Septin-2 OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=2 F6UKN5; P42208; D3Z3C0; D3Z1S1; D3YYB1; E9Q3V6; F6WYM0 Septin-2 (Fragment) OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=2; Septin-2 OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=2; Septin-2 (Fragment) OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=1; Septin-2 (Fragment) OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=1; Septin-2 (Fragment) OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=1; Septin-2 OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=1; Septin-2 (Fragment) OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=2 1 4 4 0.4695 0 1 1 1 397.96527 1588.83925 1588.83932 -0.04 -0.00002 0/0 0 0 30430408 HCD 30 MS2 40.84066 362.3 54.433 47.292 12446 12446 12440 QEplus033719.raw F4 379.8 294.6 392.6 318.6 379.1 409.2 302 4.26 1 FALSE 1.14E-05 1.76E-06 1.191 -250 49317 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVEMAAQR [R].aVEMAAQR.[Q] N-Term(TMT6plex) 2 Q8CHP8 Glycerol-3-phosphate phosphatase OS=Mus musculus OX=10090 GN=Pgp PE=1 SV=1 Q9CVY8; Q8CHP8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pgp PE=2 SV=2; Glycerol-3-phosphate phosphatase OS=Mus musculus OX=10090 GN=Pgp PE=1 SV=1 0 2 2 0.5296 0 1 1 1 552.8064 1104.60552 1104.60329 2.01 0.00111 0/0 0 0 11603534 HCD 30 MS2 18.31111 890.5 110 47.3015 12450 12450 12440 QEplus033719.raw F4 1081.6 708.8 908.8 779.9 850 1013.9 316 2.87 1 FALSE 1.14E-05 6.48E-05 0.893 -250 49326 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRDSDKTDTDWR [R].nRDSDkTDTDWR.[A] N-Term(TMT6plex); K6(TMT6plex) 7 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 2 3 3 0.4874 0 1 1 1 656.33417 1966.98795 1966.99829 -5.26 -0.00345 0/0 0 0 3330144.75 HCD 30 MS2 0 317.7 110 47.3088 12452 12452 12451 QEplus033719.raw F4 346.7 248.6 373.5 316.2 305.7 315.5 217 2.77 1 FALSE 0.001108 0.01442 0.34 -250 49330 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GELESSDQVR [K].gELESSDQVR.[E] N-Term(TMT6plex) 3 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1 0 2 2 0.5855 0 1 1 1 674.85016 1348.69304 1348.69059 1.82 0.00123 0/0 0 0 4384485.5 HCD 30 MS2 63.90998 676.4 110 47.3113 12453 12453 12451 QEplus033719.raw F4 667.3 623.1 706.7 453.7 947.4 659.9 209 2.34 1 FALSE 7.59E-05 0.002782 0.566 -250 49344 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLGVTR [R].dLGVTR.[L] N-Term(TMT6plex) 31 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q499F9; Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q05CR3; Q9QXS1-9; E9Q9J6; Q9QXS1-5; E9PW24; A0A0R4J221; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; A0A0R4J223; Q8C8S5; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.226 0 1 1 1 445.26935 889.53142 889.53045 1.09 0.00049 0/0 0 0 82632008 HCD 30 MS2 22.75167 671.1 18.065 47.3181 12456 12456 12451 QEplus033719.raw F4 749.2 543.1 695.4 565.6 757.3 715.8 150 2.08 2 FALSE 0.004972 0.08672 0.043 -250 49354 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAQAPVK [K].gAQAPVk.[A] N-Term(TMT6plex); K7(TMT6plex) 2 P47915 60S ribosomal protein L29 OS=Mus musculus OX=10090 GN=Rpl29 PE=1 SV=2 P47915; W4VSN7 60S ribosomal protein L29 OS=Mus musculus OX=10090 GN=Rpl29 PE=1 SV=2; 60S ribosomal protein L29 OS=Mus musculus OX=10090 GN=Gm3550 PE=3 SV=1 0 2 2 0.318 0 1 1 1 564.86127 1128.71526 1128.71411 1.01 0.00057 0/0 0 0 46142744 HCD 30 MS2 8.429193 1071.8 30.506 47.3204 12457 12457 12451 QEplus033719.raw F4 1351.2 797.7 1246.4 998.7 1084.7 952.2 157 2.39 1 FALSE 0.0008183 0.01131 0.384 -250 49364 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSGQDVER [R].lSGQDVER.[G] N-Term(TMT6plex) 7 Q60597 "2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh PE=1 SV=3" Q60597-4; B2RXT3; Q60597-3; Q60597-2; Q60597; E9Q7L0; Z4YJV4 "Isoform 4 of 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh; Oxoglutarate dehydrogenase (succinyl-transferring) OS=Mus musculus OX=10090 GN=Ogdhl PE=1 SV=1; Isoform 3 of 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh; Isoform 2 of 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh; 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh PE=1 SV=3; Oxoglutarate dehydrogenase (succinyl-transferring) OS=Mus musculus OX=10090 GN=Ogdhl PE=1 SV=1; Oxoglutarate dehydrogenase (succinyl-transferring) OS=Mus musculus OX=10090 GN=Ogdh PE=1 SV=1" 0 2 2 0.2667 0 1 1 1 566.81226 1132.61724 1132.61597 1.12 0.00063 0/0 0 0 35717536 HCD 30 MS2 50.10336 621.5 25.605 47.3226 12458 12458 12451 QEplus033719.raw F4 622.8 444.5 644.7 723 584.8 709.2 273 2.4 1 FALSE 3.35E-05 0.00131 0.638 -250 49383 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLDTNDR [R].vLDTNDR.[F] N-Term(TMT6plex) 6 Q3V3R1; Q3TW74 "Monofunctional C1-tetrahydrofolate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Mthfd1l PE=1 SV=2;C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1" Q3V3R1; Q8BXX7; Q3UZH3; A0A1W2P733; Q3TW74; Q922D8 "Monofunctional C1-tetrahydrofolate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Mthfd1l PE=1 SV=2; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=1 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=1 SV=4" 0 2 2 0.4202 0 1 1 1 531.2937 1061.58013 1061.57885 1.2 0.00064 0/0 0 0 25841284 HCD 30 MS2 35.59877 856.6 39.574 47.3271 12460 12460 12451 QEplus033719.raw F4 1172 749.4 924.2 658.1 858.4 777.3 272 2.38 2 FALSE 0.0002909 0.005937 0.48 -250 49391 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDCDRYALQSQQR [R].eDcDRYALQSQQR.[W] N-Term(TMT6plex); C3(Carbamidomethyl) 3 Q8BWT1 "3-ketoacyl-CoA thiolase, mitochondrial OS=Mus musculus OX=10090 GN=Acaa2 PE=1 SV=3" A0A494B9J2; Q3UKH3; Q8BWT1 "3-ketoacyl-CoA thiolase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Acaa2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acaa2 PE=2 SV=1; 3-ketoacyl-CoA thiolase, mitochondrial OS=Mus musculus OX=10090 GN=Acaa2 PE=1 SV=3" 1 3 3 0.6604 0 1 1 1 633.30646 1897.90482 1897.90239 1.28 0.00081 0/0 0 0 21955952 HCD 30 MS2 51.94751 643.4 76.262 47.3294 12461 12461 12451 QEplus033719.raw F4 668.2 389 682.2 815.3 455.1 850.3 94 3.71 1 FALSE 1.14E-05 4.77E-10 1.868 -250 49398 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAGFTPQER [K].nAGFTPQER.[Q] N-Term(TMT6plex) 2 P28352 DNA-(apurinic or apyrimidinic site) endonuclease OS=Mus musculus OX=10090 GN=Apex1 PE=1 SV=2 F6QA74; P28352 DNA-(apurinic or apyrimidinic site) endonuclease (Fragment) OS=Mus musculus OX=10090 GN=Apex1 PE=1 SV=1; DNA-(apurinic or apyrimidinic site) endonuclease OS=Mus musculus OX=10090 GN=Apex1 PE=1 SV=2 0 2 2 0.6364 0 1 1 1 624.83112 1248.65495 1248.65342 1.23 0.00077 0/0 0 0 36378324 HCD 30 MS2 8.381314 848 71.917 47.3367 12463 12463 12462 QEplus033719.raw F4 856 769.7 1005 643.1 871.3 942.7 248 2.86 1 FALSE 1.14E-05 0.0003224 0.759 -250 49411 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYIETDPANR [K].rYIETDPANR.[D] N-Term(TMT6plex) 6 P13020-2; Q3SX14 Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn;TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin Q3UCW8; Q3U9Q8; P13020-2; Q3TGJ9; P13020; Q3SX14 Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Gelsolin OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=3; TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin 1 3 3 0.5571 0 1 1 1 488.59872 1463.78162 1463.78041 0.83 0.0004 0/0 0 0 55482612 HCD 30 MS2 16.5891 647.8 34.682 47.3415 12465 12465 12462 QEplus033719.raw F4 871 496.5 709.7 436.6 652.5 720.4 332 4.29 2 TRUE 1.14E-05 2.01E-10 1.94 -250 49429 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAGTDDHTLIR [K].gAGTDDHTLIR.[V] N-Term(TMT6plex) 1 P48036 Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 P48036 Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 0 2 2 0.7063 0 1 1 1 692.87372 1384.74016 1384.73821 1.41 0.00098 0/0 0 0 14008789 HCD 30 MS2 20.11141 550.4 110 47.3488 12468 12468 12462 QEplus033719.raw F4 550.2 527.5 649.3 429.1 628.9 517.4 216 4.12 1 FALSE 1.14E-05 4.20E-10 1.879 -250 49434 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DATNDQVTK [R].dATNDQVTk.[D] N-Term(TMT6plex); K9(TMT6plex) 9 O88844 Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2 Q3TJ51; Q0QER9; O88844; Q5HZJ8; A0A087WPT4; A0A087WRS9; D3YVY3; Q8C338; A0A087WRM4 Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; IDP (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1 0 2 2 0.5852 0 1 1 1 725.40204 1449.7968 1449.79494 1.28 0.00093 0/0 0 0 12289031 HCD 30 MS2 0 572.1 110 47.3513 12469 12469 12462 QEplus033719.raw F4 628.2 581.9 613.2 436.6 644.6 528.2 425 3.64 1 FALSE 1.14E-05 2.01E-06 1.18 -250 49438 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEYQANGPEDLNR [K].hEYQANGPEDLNR.[T] N-Term(TMT6plex) 1 Q9R0P5 Destrin OS=Mus musculus OX=10090 GN=Dstn PE=1 SV=3 Q9R0P5 Destrin OS=Mus musculus OX=10090 GN=Dstn PE=1 SV=3 0 3 3 0.7183 0 1 1 1 591.2912 1771.85904 1771.85609 1.67 0.00098 0/0 0 0 7042171.5 HCD 30 MS2 0 352.1 110 47.3538 12470 12470 12462 QEplus033719.raw F4 371.3 294.7 381.8 253.9 444.8 365.9 117 5.68 1 FALSE 1.14E-05 5.50E-12 2.236 -250 49442 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIEECCRK [K].tIEEccRk.[Q] N-Term(TMT6plex); C5(Carbamidomethyl); C6(Carbamidomethyl); K8(TMT6plex) 1 G3X8Y1 Tripartite motif-containing 55 OS=Mus musculus OX=10090 GN=Trim55 PE=1 SV=1 G3X8Y1 Tripartite motif-containing 55 OS=Mus musculus OX=10090 GN=Trim55 PE=1 SV=1 1 3 3 0.616 0 1 1 1 518.61084 1553.81797 1553.818 -0.02 -0.00001 0/0 0 0 6429169 HCD 30 MS2 10.97281 759.7 110 47.3563 12471 12471 12462 QEplus033719.raw F4 902.1 361.8 813.9 943.8 394.4 1142.3 310 2.5 1 FALSE 0.001222 0.01648 0.315 -250 49447 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVNSVSHPGSGK [K].tVNSVSHPGSGk.[T] N-Term(TMT6plex); K12(TMT6plex) 8 O08784 Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 H3BK88; H3BIX0; Q05BH6; F6R3V4; O08784; Q7TPZ2; Q6PFZ6; H3BL37 Treacle protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=8; Treacle protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Tcof1 protein OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 0 3 3 0.5878 0 1 1 1 543.30975 1627.91471 1627.91679 -1.28 -0.00069 0/0 0 0 5614017.5 HCD 30 MS2 23.72257 485.7 110 47.3588 12472 12472 12462 QEplus033719.raw F4 537 403.3 447 464 672.1 391.1 397 4.1 1 FALSE 1.14E-05 6.98E-06 1.077 -250 49453 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGGSLPPQAR [K].eGGSLPPQAR.[S] N-Term(TMT6plex) 3 E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.5824 0 1 1 1 620.84607 1240.68486 1240.68472 0.12 0.00007 0/0 0 0 6964949.5 HCD 30 MS2 0 474.4 110 47.3661 12474 12474 12473 QEplus033719.raw F4 500.9 375 544.9 470.3 417.2 537.8 260 2.73 1 FALSE 1.14E-05 0.000189 0.804 -250 49462 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYIETDPANR [K].rYIETDPANR.[D] N-Term(TMT6plex) 6 P13020-2; Q3SX14 Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn;TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin Q3UCW8; Q3U9Q8; P13020-2; Q3TGJ9; P13020; Q3SX14 Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Gelsolin OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=3; TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin 1 2 2 0.6581 0 1 1 1 732.3941 1463.78093 1463.78041 0.36 0.00026 0/0 0 0 5840895.5 HCD 30 MS2 10.35593 124.2 110 47.3686 12475 12475 12473 QEplus033719.raw F4 116.2 95.5 127 106.6 151.3 148.9 327 3.51 2 TRUE 1.14E-05 1.37E-06 1.211 -250 49468 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHCEQLEK [R].eHcEQLEk.[C] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 1 P99028 "Cytochrome b-c1 complex subunit 6, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrh PE=1 SV=2" P99028 "Cytochrome b-c1 complex subunit 6, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrh PE=1 SV=2" 0 3 3 0.5336 0 1 1 1 510.9386 1530.80124 1530.79865 1.69 0.00086 0/0 0 0 138056912 HCD 30 MS2 12.82339 651 14.126 47.3731 12477 12477 12473 QEplus033719.raw F4 742.9 447.1 646.9 771 512.5 785.5 227 4.61 1 FALSE 1.14E-05 1.04E-05 1.044 -250 49477 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLTPTEVR [R].rLTPTEVR.[D] N-Term(TMT6plex) 4 P49722 Proteasome subunit alpha type-2 OS=Mus musculus OX=10090 GN=Psma2 PE=1 SV=3 P49722; Q8BKE0; Q3UWT6; Q9CZ58 Proteasome subunit alpha type-2 OS=Mus musculus OX=10090 GN=Psma2 PE=1 SV=3; Proteasome subunit alpha type-2 (Fragment) OS=Mus musculus OX=10090 GN=Psma2 PE=1 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma2 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma2 PE=2 SV=1 1 3 3 0.5332 0 1 1 1 400.91403 1200.72754 1200.72619 1.13 0.00045 0/0 0 0 43102748 HCD 30 MS2 57.97458 437.5 14.033 47.3753 12478 12478 12473 QEplus033719.raw F4 502.3 278.7 436.9 427 460.6 519.4 259 3.92 1 FALSE 0.0001603 0.003788 0.533 -250 49492 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQAYQTGK [K].aQAYQTGk.[D] N-Term(TMT6plex); K8(TMT6plex) 7 Q3UBU0 HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1 Q3TUD6; Q3UBU0; Q91V38; Q9CW12; Q8CCY5; F7C312; P08113 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Heat shock protein 90, beta (Grp94), member 1 OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Endoplasmin (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=1; Endoplasmin OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=2" 0 2 2 0.6206 0 1 1 1 662.88556 1324.76384 1324.76252 1 0.00066 0/0 0 0 16615925 HCD 30 MS2 9.87569 1050.6 110 47.3801 12480 12480 12473 QEplus033719.raw F4 1116.1 991.1 1097.5 869.9 1409.4 819.5 392 3.11 1 FALSE 0.0004888 0.007697 0.445 -250 49499 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHPDAEVQK [K].eHPDAEVQk.[N] N-Term(TMT6plex); K9(TMT6plex) 7 D3YWK6 Thiopurine S-methyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Tpmt PE=1 SV=1 D3YWK6; D3Z380; O55060; D6RIK3; A0A0R4J018; D3Z0R1; D3Z217 Thiopurine S-methyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Tpmt PE=1 SV=1; Thiopurine S-methyltransferase OS=Mus musculus OX=10090 GN=Tpmt PE=1 SV=1; Thiopurine S-methyltransferase OS=Mus musculus OX=10090 GN=Tpmt PE=1 SV=1; Thiopurine S-methyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Tpmt PE=1 SV=2; Thiopurine S-methyltransferase OS=Mus musculus OX=10090 GN=Tpmt PE=1 SV=1; Thiopurine S-methyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Tpmt PE=1 SV=1; Thiopurine S-methyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Tpmt PE=1 SV=1 0 3 3 0.6881 0 1 1 1 504.28134 1510.82947 1510.82658 1.92 0.00096 0/0 0 0 14273574 HCD 30 MS2 4.053709 752 110 47.3826 12481 12481 12473 QEplus033719.raw F4 818.7 579.8 744.8 662.8 847.6 858.3 351 4.81 1 FALSE 1.14E-05 7.15E-06 1.075 -250 49506 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSETPGATPGSK [K].gSETPGATPGSk.[I] N-Term(TMT6plex); K12(TMT6plex) 5 G5E866 Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1 Q3US00; G5E866; Q3UIB4; A0JLN0; Q99NB9 SF3b1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sf3b1 PE=2 SV=1; Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1; SF3b1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sf3b1 PE=2 SV=1; Sf3b1 protein (Fragment) OS=Mus musculus OX=10090 GN=Sf3b1 PE=2 SV=1; Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1 0 3 3 0.5132 0 1 1 1 516.28729 1546.84732 1546.84771 -0.25 -0.00013 0/0 0 0 13839519 HCD 30 MS2 39.99055 771.1 88.688 47.3849 12482 12482 12473 QEplus033719.raw F4 1106.7 602 769.2 580.1 797.9 771 392 3.78 1 FALSE 1.14E-05 2.03E-05 0.989 -250 49521 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSETPGATPGSK [K].gSETPGATPGSk.[I] N-Term(TMT6plex); K12(TMT6plex) 5 G5E866 Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1 Q3US00; G5E866; Q3UIB4; A0JLN0; Q99NB9 SF3b1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sf3b1 PE=2 SV=1; Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1; SF3b1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sf3b1 PE=2 SV=1; Sf3b1 protein (Fragment) OS=Mus musculus OX=10090 GN=Sf3b1 PE=2 SV=1; Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1 0 2 2 0.7049 0 1 1 1 773.92834 1546.84941 1546.84771 1.1 0.00085 0/0 0 0 13264854 HCD 30 MS2 9.502462 449.8 110 47.3947 12485 12485 12484 QEplus033719.raw F4 463.6 433 463.3 341 577.1 421.1 398 3.66 1 FALSE 1.14E-05 1.09E-07 1.42 -250 49527 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLPTTAQR [R].gLPTTAQR.[V] N-Term(TMT6plex) 6 Q99LF8 Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1 Q99LF8; Q3TUS5; A3KFU5; Q3UX16; Q3TSA5; Q6PHQ9 Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; PABC domain-containing protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; PABC domain-containing protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1 0 2 2 0.4921 0 1 1 1 536.82001 1072.63274 1072.63122 1.41 0.00076 0/0 0 0 37116300 HCD 30 MS2 13.32867 538.5 23.129 47.397 12486 12486 12484 QEplus033719.raw F4 575.2 360.9 607.6 540.1 468 679.1 350 2.54 1 FALSE 1.14E-05 0.0002969 0.766 -250 49536 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QCVPFRR [K].qcVPFRR.[Y] N-Term(TMT6plex); C2(Carbamidomethyl) 6 Q80V08 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1 Q80V08; B2RY53; Q9CPR4; Q6ZWZ7; Q6PHZ1; Q505B1 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Gm6133 PE=2 SV=1; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=1 SV=3; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=1 SV=1; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1; 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1 1 3 3 0.5057 0 1 1 1 397.89261 1191.66327 1191.66181 1.23 0.00049 0/0 0 0 73539400 HCD 30 MS2 33.77183 427.6 13.192 47.4037 12489 12489 12484 QEplus033719.raw F4 401.2 359 473.8 329 484.7 517.8 388 2.61 1 FALSE 0.004832 0.08461 0.049 -250 49544 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DATNDQVTK [R].dATNDQVTk.[D] N-Term(TMT6plex); K9(TMT6plex) 9 O88844 Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2 Q3TJ51; Q0QER9; O88844; Q5HZJ8; A0A087WPT4; A0A087WRS9; D3YVY3; Q8C338; A0A087WRM4 Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; IDP (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1 0 3 3 0.6964 0 1 1 1 483.93698 1449.79639 1449.79494 1 0.00048 0/0 0 0 21873656 HCD 30 MS2 26.84006 870.8 77.634 47.406 12490 12490 12484 QEplus033719.raw F4 1171.8 669.6 921.2 716 910.6 835.7 426 3.36 1 FALSE 1.14E-05 0.0007818 0.684 -250 49554 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHNYLK [R].qHNYLk.[D] N-Term(TMT6plex); K6(TMT6plex) 3 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 Q99PV0; Q3UNG1; B7ZC27 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Prpf8 PE=2 SV=1; Pre-mRNA-processing-splicing factor 8 (Fragment) OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=1 0 3 3 0.4559 0 1 1 1 420.92081 1260.74787 1260.74648 1.1 0.00046 0/0 0 0 10086866 HCD 30 MS2 31.9196 567.4 101.676 47.4108 12492 12492 12484 QEplus033719.raw F4 558.4 448.2 615.6 470.1 749.1 562.7 425 3.29 1 FALSE 0.0006574 0.01002 0.404 -250 49560 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QCVPFRR [K].qcVPFRR.[Y] N-Term(TMT6plex); C2(Carbamidomethyl) 6 Q80V08 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1 Q80V08; B2RY53; Q9CPR4; Q6ZWZ7; Q6PHZ1; Q505B1 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Gm6133 PE=2 SV=1; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=1 SV=3; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=1 SV=1; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1; 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1 1 2 2 0.3405 0 1 1 1 596.33527 1191.66326 1191.66181 1.21 0.00072 0/0 0 0 9166112 HCD 30 MS2 30.8855 613.1 110 47.4133 12493 12493 12484 QEplus033719.raw F4 630.4 526.9 738.7 457.4 676.4 649 388 2.32 1 FALSE 0.008591 0.1515 -0.089 -250 49570 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAEEEDEADPKR [R].tAEEEDEADPkR.[Q] N-Term(TMT6plex); K11(TMT6plex) 2 Q66JR8 Ptms protein OS=Mus musculus OX=10090 GN=Ptms PE=2 SV=1 Q66JR8; Q9D0J8 Ptms protein OS=Mus musculus OX=10090 GN=Ptms PE=2 SV=1; Parathymosin OS=Mus musculus OX=10090 GN=Ptms PE=1 SV=3 1 2 2 0.6816 0 1 1 1 924.47443 1847.94158 1847.93871 1.55 0.00143 0/0 0 0 3377429 HCD 30 MS2 0 192.2 110 47.4159 12494 12494 12484 QEplus033719.raw F4 178.9 237.3 219.5 146.9 212.8 157.6 249 4.02 1 FALSE 1.14E-05 2.40E-09 1.735 -250 49576 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLSPEQNCPR [R].sLSPEQNcPR.[A-] N-Term(TMT6plex); C8(Carbamidomethyl) 14 Q9D679 Ig-like domain-containing protein OS=Mus musculus OX=10090 GN=Tapbp PE=2 SV=1 Q9D679; G3UZZ2; Q9R233; Q5XW49; A0A068BIS1; Q5XW52; Q9R233-2; A0A3Q4EGL0; Q3TED6; Q5XW46; Q91WI5; Q5XW51; Q5XW48; Q3TCU5 Ig-like domain-containing protein OS=Mus musculus OX=10090 GN=Tapbp PE=2 SV=1; Tapasin (Fragment) OS=Mus musculus OX=10090 GN=Tapbp PE=1 SV=1; Tapasin OS=Mus musculus OX=10090 GN=Tapbp PE=1 SV=2; Tapasin (Fragment) OS=Mus musculus OX=10090 GN=Tapbp PE=2 SV=1; TAP binding protein OS=Mus musculus OX=10090 GN=Tapbp PE=2 SV=1; Tapasin (Fragment) OS=Mus musculus OX=10090 GN=Tapbp PE=2 SV=1; Isoform Short of Tapasin OS=Mus musculus OX=10090 GN=Tapbp; Tapasin (Fragment) OS=Mus musculus OX=10090 GN=Tapbp PE=1 SV=1; Ig-like domain-containing protein OS=Mus musculus OX=10090 GN=Tapbp PE=2 SV=1; Tapasin (Fragment) OS=Mus musculus OX=10090 GN=Tapbp PE=2 SV=1; TAP binding protein OS=Mus musculus OX=10090 GN=Tapbp PE=2 SV=1; Tapasin (Fragment) OS=Mus musculus OX=10090 GN=Tapbp PE=2 SV=1; Tapasin (Fragment) OS=Mus musculus OX=10090 GN=Tapbp PE=2 SV=1; Tapasin OS=Mus musculus OX=10090 GN=Tapbp PE=1 SV=1 0 2 2 0.5422 0 1 1 1 708.8598 1416.71233 1416.71028 1.45 0.00102 0/0 0 0 2183616.25 HCD 30 MS2 0 200.5 110 47.4232 12496 12496 12495 QEplus033719.raw F4 179.7 216.1 237.7 136.1 254.5 178.7 155 3.67 1 FALSE 1.14E-05 4.48E-05 0.924 -250 49598 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HNKPEVEVR [R].hNkPEVEVR.[S] N-Term(TMT6plex); K3(TMT6plex) 4 P59999 Actin-related protein 2/3 complex subunit 4 OS=Mus musculus OX=10090 GN=Arpc4 PE=1 SV=3 P59999; Q9D3C4; Q8BVW6; Q7TPD9 Actin-related protein 2/3 complex subunit 4 OS=Mus musculus OX=10090 GN=Arpc4 PE=1 SV=3; Actin-related protein 2/3 complex subunit 4 OS=Mus musculus OX=10090 GN=Arpc4 PE=2 SV=1; Actin-related protein 2/3 complex subunit 4 OS=Mus musculus OX=10090 GN=Arpc4 PE=2 SV=1; Actin-related protein 2/3 complex subunit 4 OS=Mus musculus OX=10090 GN=Arpc4 PE=2 SV=1 0 4 4 0.6722 0 1 1 1 392.23444 1565.91591 1565.9164 -0.31 -0.00012 0/0 0 0 34326876 HCD 30 MS2 16.68982 641 44.501 47.4302 12499 12499 12495 QEplus033719.raw F4 619.5 562.7 742.2 533.6 707.6 680.3 440 3.02 1 FALSE 0.0005556 0.0085 0.43 -250 49615 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGSQLK [K].eGSQLk.[Q] N-Term(TMT6plex); K6(TMT6plex) 1 Q9D0T1 NHP2-like protein 1 OS=Mus musculus OX=10090 GN=Snu13 PE=1 SV=4 Q9D0T1 NHP2-like protein 1 OS=Mus musculus OX=10090 GN=Snu13 PE=1 SV=4 0 2 2 0.0321 0 1 1 2 560.34247 1119.67766 1119.67739 0.24 0.00013 0/0 0 0 8179956.5 HCD 30 MS2 27.24133 730.3 110 47.435 12501 12501 12495 QEplus033719.raw F4 1381.5 487.3 763.1 468.6 507.6 774 355 1.87 1 FALSE 0.002921 0.0573 0.121 -250 49621 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHCEQLEK [R].eHcEQLEk.[C] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 1 P99028 "Cytochrome b-c1 complex subunit 6, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrh PE=1 SV=2" P99028 "Cytochrome b-c1 complex subunit 6, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrh PE=1 SV=2" 0 2 2 0.5611 0 1 1 1 765.90387 1530.80046 1530.79865 1.18 0.00091 0/0 0 0 15624796 HCD 30 MS2 5.150878 585 110 47.4375 12502 12502 12495 QEplus033719.raw F4 641.5 388.7 583 749.8 449.3 698 226 3.6 1 FALSE 1.14E-05 0.0001593 0.818 -250 49628 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSQASEEVK [K].tSQASEEVk.[T] N-Term(TMT6plex); K9(TMT6plex) 8 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; Q8C139; A0A5K1VVQ9; Q8R112; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Ttn protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.2875 0 1 1 1 718.90387 1436.80046 1436.79969 0.53 0.00038 0/0 0 0 8559410 HCD 30 MS2 25.54001 408 110 47.44 12503 12503 12495 QEplus033719.raw F4 496.2 123.1 301 768.4 182.1 576.9 390 3.93 2 FALSE 1.14E-05 5.68E-07 1.284 -250 49639 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPPREGSQGELTPANSQSR [K].sPPREGSQGELTPANSQSR.[M] N-Term(TMT6plex) 4 Q99LD4 COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1 Q99LD4; G3UXW9; A0A140LJB7; Q3MIA8 COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1; COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1; COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1; COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1 1 3 3 0.7157 0 1 1 1 743.04694 2227.12625 2227.12645 -0.09 -0.00007 0/0 0 0 2145626.25 HCD 30 MS2 0 136.6 110 47.445 12505 12505 12495 QEplus033719.raw F4 144.2 118 150.5 132.5 141 133.6 291 5.1 1 FALSE 1.14E-05 4.38E-15 2.825 -250 49653 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DCQLNAHK [R].dcQLNAHk.[D] N-Term(TMT6plex); C2(Carbamidomethyl); K8(TMT6plex) 3 Q5EBP9 Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 Q62318-2; Q5EBP9; Q3UDN8 Isoform 2 of Transcription intermediary factor 1-beta OS=Mus musculus OX=10090 GN=Trim28; Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 0 2 2 0.581 0 1 1 1 722.39331 1443.77934 1443.77785 1.03 0.00075 0/0 0 0 5515224 HCD 30 MS2 20.08772 267.4 110 47.4548 12508 12508 12506 QEplus033719.raw F4 288.5 220.1 272.2 193.1 381.9 248.5 297 3.15 1 FALSE 1.14E-05 9.43E-05 0.862 -250 49661 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAEEEDEADPKR [R].tAEEEDEADPkR.[Q] N-Term(TMT6plex); K11(TMT6plex) 2 Q66JR8 Ptms protein OS=Mus musculus OX=10090 GN=Ptms PE=2 SV=1 Q66JR8; Q9D0J8 Ptms protein OS=Mus musculus OX=10090 GN=Ptms PE=2 SV=1; Parathymosin OS=Mus musculus OX=10090 GN=Ptms PE=1 SV=3 1 3 3 0.756 0 1 1 1 616.65186 1847.94101 1847.93871 1.25 0.00077 0/0 0 0 295664032 HCD 30 MS2 13.28337 540.2 5.176 47.4571 12509 12509 12506 QEplus033719.raw F4 514.4 656.4 588.9 433 546 502.5 245 3.32 1 FALSE 1.14E-05 2.45E-07 1.353 -250 49666 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HNKPEVEVR [R].hNkPEVEVR.[S] N-Term(TMT6plex); K3(TMT6plex) 4 P59999 Actin-related protein 2/3 complex subunit 4 OS=Mus musculus OX=10090 GN=Arpc4 PE=1 SV=3 P59999; Q9D3C4; Q8BVW6; Q7TPD9 Actin-related protein 2/3 complex subunit 4 OS=Mus musculus OX=10090 GN=Arpc4 PE=1 SV=3; Actin-related protein 2/3 complex subunit 4 OS=Mus musculus OX=10090 GN=Arpc4 PE=2 SV=1; Actin-related protein 2/3 complex subunit 4 OS=Mus musculus OX=10090 GN=Arpc4 PE=2 SV=1; Actin-related protein 2/3 complex subunit 4 OS=Mus musculus OX=10090 GN=Arpc4 PE=2 SV=1 0 3 3 0.5238 0 1 1 1 522.64417 1565.91794 1565.9164 0.99 0.00052 0/0 0 0 22244164 HCD 30 MS2 48.38335 1389 84.287 47.4616 12511 12511 12506 QEplus033719.raw F4 1398.7 1364 1526.1 1018.6 1665 1361.6 447 2.73 1 FALSE 0.001607 0.02552 0.241 -250 49671 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DREEEIQK [K].dREEEIQk.[L] N-Term(TMT6plex); K8(TMT6plex) 2 A0A1Y7VMD3 Golgin subfamily A member 5 (Fragment) OS=Mus musculus OX=10090 GN=Golga5 PE=1 SV=1 A0A1Y7VMD3; Q9QYE6 Golgin subfamily A member 5 (Fragment) OS=Mus musculus OX=10090 GN=Golga5 PE=1 SV=1; Golgin subfamily A member 5 OS=Mus musculus OX=10090 GN=Golga5 PE=1 SV=2 1 3 3 0.4356 0 1 1 1 502.28336 1504.83551 1504.83714 -1.08 -0.00054 0/0 0 0 11824495 HCD 30 MS2 49.36388 1161.2 110 47.4641 12512 12512 12506 QEplus033719.raw F4 1548.3 781.9 1126.1 916.3 1347.7 1247.1 412 3.26 1 FALSE 0.0001707 0.003887 0.53 -250 49678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TERTEISK [R].tERTEISk.[T] N-Term(TMT6plex); K8(TMT6plex) 3 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q3UXJ8; Q8VHX6-2; Q8VHX6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flnc PE=2 SV=1; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 1 3 3 0.1649 0 1 1 1 474.61938 1421.8436 1421.83641 5.05 0.0024 0/0 0 0 11716228 HCD 30 MS2 46.8783 1116.5 97.824 47.4664 12513 12513 12506 QEplus033719.raw F4 1337.4 738 1150 1139 1138.3 1196.1 423 1.94 1 FALSE 0.004939 0.08629 0.044 -250 49692 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQTDKQPSGSFNR [R].nQTDkQPSGSFNR.[E] N-Term(TMT6plex); K5(TMT6plex) 3 Q8BVA4 Leiomodin-1 OS=Mus musculus OX=10090 GN=Lmod1 PE=1 SV=1 Q9CTT3; Q8BVA4; F8VPR1 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lmod1 PE=2 SV=1; Leiomodin-1 OS=Mus musculus OX=10090 GN=Lmod1 PE=1 SV=1; Leiomodin-1 OS=Mus musculus OX=10090 GN=Lmod1 PE=1 SV=1 1 3 3 0.5294 0 1 1 1 646.34778 1937.02878 1937.02411 2.41 0.00156 0/0 0 0 3493467.75 HCD 30 MS2 20.53509 327.9 110 47.4714 12515 12515 12506 QEplus033719.raw F4 363.8 228.7 382.1 310.5 343.9 338.2 379 2.72 1 FALSE 1.14E-05 0.0004078 0.74 -250 49700 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEYQANGPEDLNR [K].hEYQANGPEDLNR.[T] N-Term(TMT6plex) 1 Q9R0P5 Destrin OS=Mus musculus OX=10090 GN=Dstn PE=1 SV=3 Q9R0P5 Destrin OS=Mus musculus OX=10090 GN=Dstn PE=1 SV=3 0 2 2 0.8945 0 1 1 1 886.43414 1771.86101 1771.85609 2.78 0.00246 0/0 0 0 6256199 HCD 30 MS2 0 206.4 110 47.4739 12516 12516 12506 QEplus033719.raw F4 212.9 190.5 227.6 132.7 269.5 205.3 121 4.74 1 FALSE 1.14E-05 2.25E-09 1.74 -250 49703 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MFGGSGTSSRPSSNR [R].mFGGSGTSSRPSSNR.[S] N-Term(TMT6plex) 8 Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; A2AKJ2; Q3U6S1; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 3 3 0.6859 0 1 1 1 586.29266 1756.86344 1756.8598 2.07 0.00121 0/0 0 0 27003698 HCD 30 MS2 0 543.5 74.637 47.4812 12518 12518 12517 QEplus033719.raw F4 550.5 561.7 584.6 356.8 713 494.7 147 3.82 1 FALSE 1.14E-05 4.16E-10 1.879 -250 49710 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDPGDQVK [R].gDPGDQVk.[V] N-Term(TMT6plex); K8(TMT6plex) 1 Q6A0A9 Constitutive coactivator of PPAR-gamma-like protein 1 OS=Mus musculus OX=10090 GN=FAM120A PE=1 SV=2 Q6A0A9 Constitutive coactivator of PPAR-gamma-like protein 1 OS=Mus musculus OX=10090 GN=FAM120A PE=1 SV=2 0 2 2 0.4455 0 1 1 1 637.3642 1273.72112 1273.71524 4.62 0.00294 0/0 0 0 8877493 HCD 30 MS2 56.9464 1083.6 110 47.4838 12519 12519 12517 QEplus033719.raw F4 1130.9 944.5 1165.1 905.3 1316.6 1039.4 339 2.11 1 FALSE 1.14E-05 0.0003916 0.743 -250 49716 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TRFQESEERPK [K].tRFQESEERPk.[L] N-Term(TMT6plex); K11(TMT6plex) 4 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 1 4 4 0.5414 0 1 1 1 467.01266 1865.02883 1865.02813 0.37 0.00017 0/0 0 0 48434780 HCD 30 MS2 12.58403 693.6 35.828 47.486 12520 12520 12517 QEplus033719.raw F4 766.8 582.5 809.6 528.7 695.1 779 432 2.9 1 FALSE 1.14E-05 2.83E-06 1.151 -250 49723 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSTVLTR [K].tSTVLTR.[H] N-Term(TMT6plex) 1 Q3TJD7 PDZ and LIM domain protein 7 OS=Mus musculus OX=10090 GN=Pdlim7 PE=1 SV=1 Q3TJD7 PDZ and LIM domain protein 7 OS=Mus musculus OX=10090 GN=Pdlim7 PE=1 SV=1 0 2 2 0.4299 0 1 1 1 503.8093 1006.61131 1006.60943 1.88 0.00094 0/0 0 0 19908600 HCD 30 MS2 35.87618 886.3 71.016 47.4883 12521 12521 12517 QEplus033719.raw F4 926.9 775.9 948.7 661.8 1112.5 892.2 25 2.14 1 FALSE 0.001524 0.02303 0.257 -250 49728 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQDPCSAPQMR [R].tQDPcSAPQMR.[M] N-Term(TMT6plex); C5(Carbamidomethyl) 2 E9Q6R7 Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 O08614; E9Q6R7 Cytoskeletal protein OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 0 2 2 0.7719 0 1 1 1 760.36475 1519.72222 1519.71946 1.81 0.00138 0/0 0 0 4315096.5 HCD 30 MS2 0 296 110 47.4908 12522 12522 12517 QEplus033719.raw F4 315.3 213.7 306.4 260.3 333.6 347 51 2.85 1 FALSE 1.14E-05 4.53E-07 1.303 -250 49780 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGYAEGK [K].eGYAEGk.[I] N-Term(TMT6plex); K7(TMT6plex) 1 Q3UU11 Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp7 PE=2 SV=1 Q3UU11 Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp7 PE=2 SV=1 0 2 2 0.4491 0 1 1 1 606.33856 1211.66985 1211.66722 2.17 0.00131 0/0 0 0 5328995.5 HCD 30 MS2 53.91328 900.8 110 47.5127 12530 12530 12528 QEplus033719.raw F4 1010.5 695.9 947.5 820.2 1134.7 795.7 251 2.16 1 FALSE 0.0002419 0.004899 0.504 -250 49787 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CHTPPLYR [K].cHTPPLYR.[M] N-Term(TMT6plex); C1(Carbamidomethyl) 4 P62717 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1 A0A1D5RMC7; A0A1D5RM79; A0A1D5RM85; P62717 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a (Fragment) OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1 0 3 3 0.4741 0 1 1 1 424.896 1272.67344 1272.67204 1.09 0.00046 0/0 0 0 104144696 HCD 30 MS2 49.57847 662.7 8.745 47.5149 12531 12531 12528 QEplus033719.raw F4 820.9 386.1 699.5 495.9 671.9 901.7 176 2.51 1 FALSE 0.002056 0.037 0.186 -250 49799 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLSNEELER [K].rLSNEELER.[F] N-Term(TMT6plex) 1 Q8BU30 "Isoleucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Iars1 PE=1 SV=2" Q8BU30 "Isoleucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Iars1 PE=1 SV=2" 1 3 3 0.3282 0 1 1 1 458.92325 1374.75519 1374.75386 0.97 0.00044 0/0 0 0 48793108 HCD 30 MS2 51.10376 572.9 17.299 47.5195 12533 12533 12528 QEplus033719.raw F4 622.7 418.7 555.5 474.4 718 647.8 352 3.87 1 FALSE 1.14E-05 0.0001495 0.824 -250 49822 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIEEAACSR [R].tIEEAAcSR.[R] N-Term(TMT6plex); C7(Carbamidomethyl) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.7467 0 1 1 1 633.32159 1265.63591 1265.63572 0.15 0.0001 0/0 0 0 20546690 HCD 30 MS2 12.04743 1264.6 110 47.531 12538 12538 12528 QEplus033719.raw F4 1525.7 661.6 1437.5 1448.3 829.5 1685.2 147 3.79 1 FALSE 1.14E-05 3.73E-05 0.939 -250 49827 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSTAAQEVK [K].sSTAAQEVk.[T] N-Term(TMT6plex); K9(TMT6plex) 1 Q8BK67 Protein RCC2 OS=Mus musculus OX=10090 GN=Rcc2 PE=1 SV=1 Q8BK67 Protein RCC2 OS=Mus musculus OX=10090 GN=Rcc2 PE=1 SV=1 0 2 2 0.5783 0 1 1 1 689.90173 1378.79619 1378.79422 1.43 0.00099 0/0 0 0 28211636 HCD 30 MS2 8.111654 770.7 86.37 47.5383 12540 12540 12539 QEplus033719.raw F4 900.9 811.1 786.4 524.9 1062.7 538.2 464 3.96 1 FALSE 1.14E-05 1.13E-06 1.227 -250 49854 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YSEIQDR [R].ySEIQDR.[C] N-Term(TMT6plex) 2 F7ACR9 Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 F7ACR9; Q3TRV6 Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1 0 2 2 0.578 0 1 1 1 570.29901 1139.59075 1139.58942 1.16 0.00066 0/0 0 0 18841088 HCD 30 MS2 7.798174 1050.5 110 47.5456 12543 12543 12539 QEplus033719.raw F4 1145.2 656.5 1272.9 1047.7 706.3 1474.2 128 2.82 1 FALSE 0.0004392 0.007498 0.448 -250 49864 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGEQAIK [K].gGEQAIk.[E] N-Term(TMT6plex); K7(TMT6plex) 5 P63037 DnaJ homolog subfamily A member 1 OS=Mus musculus OX=10090 GN=Dnaja1 PE=1 SV=1 P63037; Q3TK61; B1AXY1; B1AXX9; B1AXY0 DnaJ homolog subfamily A member 1 OS=Mus musculus OX=10090 GN=Dnaja1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja1 PE=2 SV=1; DnaJ homolog subfamily A member 1 (Fragment) OS=Mus musculus OX=10090 GN=Dnaja1 PE=1 SV=1; DnaJ homolog subfamily A member 1 (Fragment) OS=Mus musculus OX=10090 GN=Dnaja1 PE=1 SV=1; DnaJ homolog subfamily A member 1 (Fragment) OS=Mus musculus OX=10090 GN=Dnaja1 PE=1 SV=1 0 2 2 0.207 0 1 1 1 580.85645 1160.70561 1160.70394 1.44 0.00084 0/0 0 0 15773813 HCD 30 MS2 20.1663 1045.2 110 47.5506 12545 12545 12539 QEplus033719.raw F4 1481.7 793.4 1198.7 821.5 997.5 978.5 330 2.27 1 FALSE 0.0006966 0.0101 0.403 -250 49873 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQQHYYEK [R].tQQHYYEk.[D] N-Term(TMT6plex); K8(TMT6plex) 2 Q9WUB3 "Glycogen phosphorylase, muscle form OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=3" E9PUM3; Q9WUB3 "Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=1; Glycogen phosphorylase, muscle form OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=3" 0 3 3 0.649 0 1 1 1 518.94586 1554.82303 1554.83166 -5.55 -0.00288 0/0 0 0 6858456.5 HCD 30 MS2 21.63302 906.7 110 47.5531 12546 12546 12539 QEplus033719.raw F4 1005.1 439.9 795.4 1133.6 725.5 1340.9 277 3.96 1 FALSE 3.35E-05 0.001209 0.645 -250 49936 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSPQQIDHAK [R].gSPQQIDHAk.[Q] N-Term(TMT6plex); K10(TMT6plex) 3 Q3U0V1 Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2 Q3U0V1; A0A3B2WCD8; A0A3B2W465 Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2; Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=1; Far upstream element-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=1 0 3 3 0.7137 0 1 1 1 513.62921 1538.87308 1538.86911 2.58 0.00132 0/0 0 0 81992016 HCD 30 MS2 42.65321 869.7 19.909 47.577 12555 12555 12550 QEplus033719.raw F4 824 823.2 871 617.8 1348.1 734 410 4.89 1 FALSE 1.14E-05 5.87E-07 1.281 -250 49944 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVIETCR [K].tVIETcR.[E] N-Term(TMT6plex); C6(Carbamidomethyl) 4 Q3US15 NAD(P)-dependent steroid dehydrogenase-like protein OS=Mus musculus OX=10090 GN=Nsdhl PE=1 SV=1 U3M993; Q3US15; Q8VE30; Q7TPY3 NAD(P)-dependent steroid dehydrogenase-like protein OS=Mus musculus OX=10090 GN=Nsdhl PE=2 SV=1; NAD(P)-dependent steroid dehydrogenase-like protein OS=Mus musculus OX=10090 GN=Nsdhl PE=1 SV=1; NAD(P) dependent steroid dehydrogenase-like OS=Mus musculus OX=10090 GN=Nsdhl PE=2 SV=1; NAD(P) dependent steroid dehydrogenase-like OS=Mus musculus OX=10090 GN=Nsdhl PE=2 SV=1 0 2 2 0.3135 0 1 1 1 554.30676 1107.60625 1107.60296 2.97 0.00164 0/0 0 0 58724980 HCD 30 MS2 49.45085 744.9 16.121 47.5792 12556 12556 12550 QEplus033719.raw F4 970.3 599 781.8 591.4 643.5 883.2 267 1.85 1 FALSE 0.001266 0.01725 0.307 -250 49951 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSVDLAR [K].gSVDLAR.[A] N-Term(TMT6plex) 1 Q3V3R1 "Monofunctional C1-tetrahydrofolate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Mthfd1l PE=1 SV=2" Q3V3R1 "Monofunctional C1-tetrahydrofolate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Mthfd1l PE=1 SV=2" 0 2 2 0.1171 0 1 1 1 473.78033 946.55339 946.55191 1.57 0.00074 0/0 0 0 43175900 HCD 30 MS2 16.33053 848.8 31.345 47.5837 12558 12558 12550 QEplus033719.raw F4 863.6 797.6 907.9 701.8 1002.4 819.6 163 2.22 1 FALSE 0.002526 0.04979 0.143 -250 49959 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGPSGGEGVEPERR [R].mGPSGGEGVEPERR.[E] N-Term(TMT6plex) 3 Q543N3 LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 A2A6H0; Q543N3; A2A6G9 LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 1 3 3 0.7662 0 1 1 1 562.95386 1686.84702 1686.84308 2.33 0.00131 0/0 0 0 26998072 HCD 30 MS2 38.75772 766.9 51.591 47.586 12559 12559 12550 QEplus033719.raw F4 758.1 737.6 854 570.4 877.2 803.9 173 5.26 1 FALSE 1.14E-05 9.56E-12 2.191 -250 49962 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVGASGSFR [K].gVGASGSFR.[L] N-Term(TMT6plex) 3 Q3U4Y0 H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f0 PE=2 SV=1 Q3U4Y0; Q8C1Y3; P10922 H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f0 PE=2 SV=1; H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f0 PE=2 SV=1; Histone H1.0 OS=Mus musculus OX=10090 GN=H1-0 PE=2 SV=4 0 2 2 0.6856 0 1 1 1 533.79785 1066.58843 1066.58427 3.89 0.00208 0/0 0 0 22660062 HCD 30 MS2 23.16491 1879.2 110 47.5885 12560 12560 12550 QEplus033719.raw F4 1761.1 1904.1 2406.8 1575.7 1679.5 1947.9 176 2.99 1 FALSE 1.14E-05 2.83E-06 1.152 -250 49968 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVDQLR [K].eVDQLR.[L] N-Term(TMT6plex) 12 Q6AXB7 Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1 PE=1 SV=1 P35922-8; Q6AXB7; E9QAT0; E9QAS9; E9QAS8; P35922-7; P35922-2; P35922-9; Q547R0; P35922; E9QNF5; D3Z6U8 Isoform 8 of Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1; Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1 PE=1 SV=1; Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1 PE=1 SV=1; Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1 PE=1 SV=1; Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1 PE=1 SV=1; Isoform 7 of Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1; Isoform 2 of Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1; Isoform 9 of Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1; Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1 PE=2 SV=1; Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1 PE=1 SV=1; Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1 PE=1 SV=1; Synaptic functional regulator FMR1 OS=Mus musculus OX=10090 GN=Fmr1 PE=1 SV=1 0 2 2 0.1979 0 1 1 1 494.78632 988.56536 988.56248 2.91 0.00144 0/0 0 0 12199551 HCD 30 MS2 45.06122 1001.5 110 47.5958 12562 12562 12561 QEplus033719.raw F4 1014.9 935.4 1075.3 723.1 1247.6 1012.8 404 1.92 1 FALSE 0.002173 0.04136 0.17 -250 49985 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVEQLR [K].eVEQLR.[M] N-Term(TMT6plex) 10 Q61584 Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1 PE=1 SV=2 Q61584; Q8C7U4; Q61584-5; Q61584-3; A0A0H2UH27; A0A0G2JEP0; Q61584-6; Q61584-4; Q61584-2; Q61584-7 Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Fxr1 PE=2 SV=1; Isoform D of Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1; Isoform B of Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1; Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1 PE=1 SV=1; Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1 PE=1 SV=1; Isoform F of Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1; Isoform C of Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1; Isoform A of Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1; Isoform G of Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1 0 2 2 0.0826 0 1 1 1 501.79309 1002.57891 1002.57813 0.78 0.00039 0/0 0 0 78790408 HCD 30 MS2 11.38324 623.2 15.75 47.6003 12564 12564 12561 QEplus033719.raw F4 672.4 402.5 680.3 617.6 549.7 816.4 273 2.42 1 FALSE 0.003397 0.06554 0.099 -250 50000 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTGAVLK [K].hTGAVLk.[G] N-Term(TMT6plex); K7(TMT6plex) 4 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q91YQ5; Q5RKP4; Q3U900; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 0 3 3 0.4105 0 1 1 1 395.25729 1183.75733 1183.75631 0.86 0.00034 0/0 0 0 50423360 HCD 30 MS2 40.35755 559.5 13.965 47.6048 12566 12566 12561 QEplus033719.raw F4 630.1 359.1 630.8 551.5 663.8 521.5 140 3.63 1 FALSE 4.43E-05 0.001609 0.619 -250 50010 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETLQNVR [K].eTLQNVR.[T] N-Term(TMT6plex) 5 Q8R1X6 Spartin OS=Mus musculus OX=10090 GN=Spart PE=1 SV=1 Q8R1X6-2; D3Z2D6; D3Z3F8; D3Z1M5; Q8R1X6 "Isoform 2 of Spartin OS=Mus musculus OX=10090 GN=Spart; Spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) (Fragment) OS=Mus musculus OX=10090 GN=Spg20 PE=1 SV=1; Spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) OS=Mus musculus OX=10090 GN=Spg20 PE=1 SV=1; Spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) (Fragment) OS=Mus musculus OX=10090 GN=Spg20 PE=1 SV=1; Spartin OS=Mus musculus OX=10090 GN=Spart PE=1 SV=1" 0 2 2 0.413 0 1 1 1 544.8175 1088.62773 1088.62614 1.47 0.0008 0/0 0 0 24822110 HCD 30 MS2 32.4024 853.3 67.495 47.6071 12567 12567 12561 QEplus033719.raw F4 1038.6 667.8 920.1 631.2 906.5 955.6 344 2.3 1 FALSE 0.001591 0.02452 0.247 -250 50015 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NESLTVR [K].nESLTVR.[L] N-Term(TMT6plex) 4 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 Q3TH77; E9Q7G0; A0A1B0GT61; A0A1B0GSW3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Numa1 PE=2 SV=1; Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1; Nuclear mitotic apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1; Nuclear mitotic apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 0 2 2 0.2735 0 1 1 1 524.30432 1047.60137 1047.59959 1.7 0.00089 0/0 0 0 21925438 HCD 30 MS2 15.16093 972 85.837 47.6093 12568 12568 12561 QEplus033719.raw F4 1083.5 778.5 932.9 530.1 1675.2 831.7 268 2.45 1 FALSE 0.0006126 0.009151 0.419 -250 50023 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESCVECQK [K].eScVEcQk.[T] N-Term(TMT6plex); C3(Carbamidomethyl); C6(Carbamidomethyl); K8(TMT6plex) 5 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q8CD09; Q9ERG0; Q8C7S2; Q8C3R7; Q8BT15 LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 0 2 2 0.7811 0 1 1 1 749.37646 1497.74565 1497.74417 0.99 0.00074 0/0 0 0 20592832 HCD 30 MS2 3.418408 915.3 110 47.6119 12569 12569 12561 QEplus033719.raw F4 977.3 902.6 1108.9 578.4 1078 846.6 176 3.38 1 FALSE 1.14E-05 0.0005303 0.717 -250 50045 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQQEAAATGSR [R].lQQEAAATGSR.[V] N-Term(TMT6plex) 3 P28650 Adenylosuccinate synthetase isozyme 1 OS=Mus musculus OX=10090 GN=Adss1 PE=1 SV=2 P28650-2; P28650; J3QN31 Isoform 2 of Adenylosuccinate synthetase isozyme 1 OS=Mus musculus OX=10090 GN=Adss1; Adenylosuccinate synthetase isozyme 1 OS=Mus musculus OX=10090 GN=Adss1 PE=1 SV=2; Adenylosuccinate synthetase isozyme 1 OS=Mus musculus OX=10090 GN=Adssl1 PE=1 SV=1 0 2 2 0.6247 0 1 1 1 680.87292 1360.73857 1360.73821 0.27 0.00018 0/0 0 0 15594632 HCD 30 MS2 0 482.5 110 47.6239 12573 12573 12572 QEplus033719.raw F4 624.9 140.2 379.1 884.1 200.4 666.3 331 3.89 1 FALSE 1.14E-05 8.23E-09 1.633 -250 50055 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FTADEAR [R].fTADEAR.[D] N-Term(TMT6plex) 1 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 0 2 2 0.4978 0 1 1 1 519.77545 1038.54363 1038.54174 1.82 0.00094 0/0 0 0 13210583 HCD 30 MS2 11.43344 960.8 110 47.6264 12574 12574 12572 QEplus033719.raw F4 1049 811.3 1014.7 786.7 1038 1065.1 147 2.25 1 FALSE 0.0002909 0.006013 0.478 -250 50074 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FTDTRKDEQER [R].fTDTRkDEQER.[C] N-Term(TMT6plex); K6(TMT6plex) 15 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q8C153; P58252; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3UZ14; Q3TK17; Q3TLB1; Q3TWX1; Q3TX47; O89069 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 2 4 4 0.3147 0 1 1 1 471.50665 1883.00478 1883.00231 1.31 0.00062 0/0 0 0 53173148 HCD 30 MS2 15.20537 757.4 29.815 47.631 12576 12576 12572 QEplus033719.raw F4 790.4 622.9 946.5 559.4 848.2 777 419 1.97 1 FALSE 0.007689 0.1258 -0.053 -250 50081 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAGHPLAQNER [K].iAGHPLAQNER.[C] N-Term(TMT6plex) 5 Q3TGS7 Sorting nexin-12 OS=Mus musculus OX=10090 GN=Snx12 PE=1 SV=1 Q3TGS7; Q99M52; Q6ZWQ5; Q3V2H3; O70493 Sorting nexin-12 OS=Mus musculus OX=10090 GN=Snx12 PE=1 SV=1; Sorting nexin 12 OS=Mus musculus OX=10090 GN=Snx12 PE=2 SV=1; Sorting nexin-12 OS=Mus musculus OX=10090 GN=Snx12 PE=1 SV=1; Sorting nexin-12 OS=Mus musculus OX=10090 GN=Snx12 PE=1 SV=1; Sorting nexin-12 OS=Mus musculus OX=10090 GN=Snx12 PE=1 SV=1 0 3 3 0.5577 0 1 1 1 478.93936 1434.80353 1434.80148 1.43 0.00068 0/0 0 0 30673180 HCD 30 MS2 25.18772 606.2 53.885 47.6332 12577 12577 12572 QEplus033719.raw F4 593.6 473.6 656.7 519 686.7 707.5 466 4.07 1 FALSE 1.14E-05 1.40E-07 1.4 -250 50100 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLMESGANR [R].sLMESGANR.[L] N-Term(TMT6plex) 9 E9QP49; Q99MS7 EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1;EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1 Q99MS7-3; E9QP49; Q99MS7; A0A494BA91; A0A494B9G7; Q99MS7-4; Q99MS7-5; G5E8Y6; Q99MS7-2 Isoform 3 of EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1; EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1; EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1; EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1; EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1; Isoform 4 of EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1; Isoform 5 of EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1; EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1; Isoform 2 of EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 0 2 2 0.6918 0 1 1 1 597.31189 1193.6165 1193.61459 1.6 0.00096 0/0 0 0 16315469 HCD 30 MS2 14.31988 826.9 110 47.638 12579 12579 12572 QEplus033719.raw F4 1265.9 342 699.9 997.9 572.9 1082.7 139 2.92 2 FALSE 1.14E-05 0.000112 0.848 -250 50107 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVEAEK [K].nVEAEk.[T] N-Term(TMT6plex); K6(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.1982 0 1 1 1 574.34003 1147.67278 1147.67231 0.41 0.00023 0/0 0 0 15853077 HCD 30 MS2 48.50463 654.6 45.307 47.6403 12580 12580 12572 QEplus033719.raw F4 1298.7 391.5 630.3 433.7 448.5 724.8 455 2.27 1 FALSE 0.002056 0.03671 0.187 -250 50116 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNIHCNTIAPNAGSR [K].nNIHcNTIAPNAGSR.[M] N-Term(TMT6plex); C5(Carbamidomethyl) 3 P51660 Peroxisomal multifunctional enzyme type 2 OS=Mus musculus OX=10090 GN=Hsd17b4 PE=1 SV=3 P51660; Q3TT11; Q3UHW2 Peroxisomal multifunctional enzyme type 2 OS=Mus musculus OX=10090 GN=Hsd17b4 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsd17b4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsd17b4 PE=2 SV=1 0 3 3 0.7899 0 1 1 1 623.31781 1867.93888 1867.93944 -0.3 -0.00019 0/0 0 0 11308102 HCD 30 MS2 5.789575 293.3 110 47.6428 12581 12581 12572 QEplus033719.raw F4 299.7 234.3 341.8 257.2 318.1 308.4 224 5.33 1 FALSE 1.14E-05 6.68E-09 1.65 -250 50121 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APSQEPASTGK [K].aPSQEPASTGk.[S] N-Term(TMT6plex); K11(TMT6plex) 2 A0A4Y5WWJ7 Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1 A0A4Y5WWJ7; E9PUR2 Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1; Unconventional myosin-XVIIIa (Fragment) OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=2 0 2 2 0.6519 0 1 1 1 765.93134 1530.85539 1530.85279 1.7 0.0013 0/0 0 0 5309348 HCD 30 MS2 18.39733 313.7 110 47.6453 12582 12582 12572 QEplus033719.raw F4 345.3 119.9 333.1 446.1 181.4 456.4 355 3.62 1 FALSE 1.14E-05 5.17E-08 1.482 -250 50130 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYQEGLAR [R].sYQEGLAR.[L] N-Term(TMT6plex) 2 Q8C161 AAR2 splicing factor homolog OS=Mus musculus OX=10090 GN=Aar2 PE=2 SV=1 Q8C161; Q9D2V5 AAR2 splicing factor homolog OS=Mus musculus OX=10090 GN=Aar2 PE=2 SV=1; Protein AAR2 homolog OS=Mus musculus OX=10090 GN=Aar2 PE=1 SV=3 0 2 2 0.3731 0 1 1 1 576.81647 1152.62566 1152.62105 4 0.0023 0/0 0 0 1573319.625 HCD 30 MS2 82.20634 534.1 110 47.6526 12584 12584 12583 QEplus033719.raw F4 599.4 442.3 570.1 436.7 529.4 626.5 207 2.01 1 FALSE 0.0001401 0.003241 0.55 -250 50145 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALGGEDVR [K].aLGGEDVR.[V] N-Term(TMT6plex) 1 P12763 SWISS-PROT:P12763 (Bos taurus) Alpha-2-HS-glycoprotein precursor P12763 SWISS-PROT:P12763 (Bos taurus) Alpha-2-HS-glycoprotein precursor 0 2 2 0.1145 0 1 1 1 523.2962 1045.58513 1045.58394 1.14 0.0006 0/0 0 0 34012888 HCD 30 MS2 28.31267 669.5 26.116 47.6571 12586 12586 12583 QEplus033719.raw F4 725.8 340.6 382.3 225.2 2027.8 315.4 282 2.62 1 TRUE 0.0002119 0.004473 0.514 -250 50153 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEATLEAEQTRR [R].tEATLEAEQTRR.[Q] N-Term(TMT6plex) 2 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2 1 3 3 0.6134 0 1 1 1 545.29584 1633.87296 1633.87068 1.4 0.00076 0/0 0 0 28290038 HCD 30 MS2 45.75388 495.1 33.138 47.6616 12588 12588 12583 QEplus033719.raw F4 500.8 448.4 529.3 368.5 585.5 538 314 4.19 1 FALSE 1.14E-05 9.99E-15 2.757 -250 50166 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTNEVGSSTCSAR [R].vTNEVGSSTcSAR.[V] N-Term(TMT6plex); C10(Carbamidomethyl) 5 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.7214 0 1 1 1 798.89722 1596.78716 1596.7849 1.41 0.00113 0/0 0 0 11099057 HCD 30 MS2 14.39512 265.2 110 47.6664 12590 12590 12583 QEplus033719.raw F4 289.8 45.1 238.7 536.6 44.1 437 132 4.02 2 FALSE 1.14E-05 4.54E-12 2.252 -250 50172 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVPVDEAR [R].qVPVDEAR.[G] N-Term(TMT6plex) 3 Q9JIW9 Ras-related protein Ral-B OS=Mus musculus OX=10090 GN=Ralb PE=1 SV=1 Q9JIW9; Q8CCG5; F6QC68 Ras-related protein Ral-B OS=Mus musculus OX=10090 GN=Ralb PE=1 SV=1; Small monomeric GTPase OS=Mus musculus OX=10090 GN=Ralb PE=2 SV=1; Small monomeric GTPase (Fragment) OS=Mus musculus OX=10090 GN=Ralb PE=1 SV=2 0 2 2 0.6348 0 1 1 1 571.82196 1142.63664 1142.6367 -0.05 -0.00003 0/0 0 0 10639271 HCD 30 MS2 29.26863 695.8 110 47.6689 12591 12591 12583 QEplus033719.raw F4 731.9 630.3 741.6 461.8 926.3 682.9 154 2.82 1 FALSE 3.35E-05 0.001402 0.632 -250 50181 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEVGGTGISQR [K].tEVGGTGISQR.[E] N-Term(TMT6plex) 1 Q99MS7 EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1 Q99MS7 EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1 0 2 2 0.6103 0 1 1 1 667.36871 1333.73015 1333.72731 2.13 0.00142 0/0 0 0 3219966.25 HCD 30 MS2 0 293.7 110 47.6715 12592 12592 12583 QEplus033719.raw F4 329.8 176.7 264.7 361.1 236.4 393.2 379 3.49 1 FALSE 1.14E-05 1.45E-08 1.586 -250 50187 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYDDRDYYSR [R].gYDDRDYYSR.[S] N-Term(TMT6plex) 2 F8WJG3 Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1 F8WJG3; P62996 Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1; Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1 1 2 2 0.7633 0 1 1 1 769.85852 1538.70976 1538.7073 1.6 0.00123 0/0 0 0 3103608.5 HCD 30 MS2 39.90522 201.3 110 47.674 12593 12593 12583 QEplus033719.raw F4 196.5 196.2 219.1 161.7 252.1 182.4 51 2.45 1 FALSE 1.14E-05 0.0004258 0.736 -250 50194 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FTDTRKDEQER [R].fTDTRkDEQER.[C] N-Term(TMT6plex); K6(TMT6plex) 15 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q8C153; P58252; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3UZ14; Q3TK17; Q3TLB1; Q3TWX1; Q3TX47; O89069 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 2 3 3 0.5434 0 1 1 1 628.3396 1883.00425 1883.00231 1.03 0.00065 0/0 0 0 25274840 HCD 30 MS2 3.60217 727.3 110 47.6813 12595 12595 12594 QEplus033719.raw F4 699.6 639.8 917.9 530.4 846.4 729.9 423 2.65 1 FALSE 0.001615 0.02607 0.238 -250 50211 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGTIVPR [R].gGTIVPR.[W] N-Term(TMT6plex) 3 A1A4T2 Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1 Q8BHN3-3; A1A4T2; Q8BHN3 Isoform 3 of Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab; Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab PE=1 SV=1 0 2 2 0.1429 0 1 1 1 464.79309 928.57891 928.57773 1.26 0.00059 0/0 0 0 17272668 HCD 30 MS2 47.25688 1051.2 71.385 47.6926 12600 12600 12594 QEplus033719.raw F4 1058.3 959.8 1234.9 818.7 1097.6 1137.8 108 1.82 1 FALSE 0.002921 0.05731 0.121 -250 50219 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTFHPTGDDRR [K].vTFHPTGDDRR.[L] N-Term(TMT6plex) 4 Q60847 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3 Q60847; E9PX70; Q60847-5; Q60847-2 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3; Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1; Isoform 5 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 2 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 1 4 4 0.6575 0 1 1 1 383.20636 1529.80361 1529.8022 0.92 0.00035 0/0 0 0 10768536 HCD 30 MS2 18.59267 344.9 110 47.6951 12601 12601 12594 QEplus033719.raw F4 408.3 249.9 336.6 226.6 510.2 337.6 243 4.38 1 FALSE 1.14E-05 0.0001051 0.853 -250 50246 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGEQINK [R].gGEQINk.[I] N-Term(TMT6plex); K7(TMT6plex) 3 Q3U0V1 Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2 Q3U0V1; A0A3B2WCD8; Q9R1J3 Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2; Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=1; KH type splicing regulatory protein KSRP (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1 0 2 2 0.2554 0 1 1 1 602.35956 1203.71184 1203.70976 1.73 0.00104 0/0 0 0 6726110.5 HCD 30 MS2 52.43483 856.3 110 47.7023 12604 12604 12594 QEplus033719.raw F4 1126.2 795.1 940.3 727.3 743.6 805.3 365 2.31 1 FALSE 0.002586 0.05077 0.14 -250 50253 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGPSGGEGVEPERR [R].mGPSGGEGVEPERR.[E] N-Term(TMT6plex) 3 Q543N3 LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 A2A6H0; Q543N3; A2A6G9 LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 1 2 2 0.5865 0 1 1 1 843.92682 1686.84636 1686.84308 1.94 0.00164 0/0 0 0 6448500.5 HCD 30 MS2 8.318198 223.4 110 47.7096 12606 12606 12605 QEplus033719.raw F4 216.2 223.1 258 160.3 256.8 226.2 173 3.7 1 FALSE 1.14E-05 1.91E-08 1.564 -250 50256 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAGHPLAQNER [K].iAGHPLAQNER.[C] N-Term(TMT6plex) 5 Q3TGS7 Sorting nexin-12 OS=Mus musculus OX=10090 GN=Snx12 PE=1 SV=1 Q3TGS7; Q99M52; Q6ZWQ5; Q3V2H3; O70493 Sorting nexin-12 OS=Mus musculus OX=10090 GN=Snx12 PE=1 SV=1; Sorting nexin 12 OS=Mus musculus OX=10090 GN=Snx12 PE=2 SV=1; Sorting nexin-12 OS=Mus musculus OX=10090 GN=Snx12 PE=1 SV=1; Sorting nexin-12 OS=Mus musculus OX=10090 GN=Snx12 PE=1 SV=1; Sorting nexin-12 OS=Mus musculus OX=10090 GN=Snx12 PE=1 SV=1 0 2 2 0.3908 0 1 1 1 717.90515 1434.80303 1434.80148 1.08 0.00077 0/0 0 0 4403436 HCD 30 MS2 0 219.1 110 47.7122 12607 12607 12605 QEplus033719.raw F4 220.1 180.7 226.7 191 248.5 247.6 467 3.71 1 FALSE 1.14E-05 5.07E-10 1.863 -250 50266 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGQAVDYDGSR [K].kGQAVDYDGSR.[T] N-Term(TMT6plex); K1(TMT6plex) 2 A0A0R4J0Z1 Protein disulfide-isomerase A4 OS=Mus musculus OX=10090 GN=Pdia4 PE=1 SV=1 A0A0R4J0Z1; P08003 Protein disulfide-isomerase A4 OS=Mus musculus OX=10090 GN=Pdia4 PE=1 SV=1; Protein disulfide-isomerase A4 OS=Mus musculus OX=10090 GN=Pdia4 PE=1 SV=3 1 3 3 0.6017 0 1 1 1 551.97095 1653.89829 1653.89605 1.35 0.00074 0/0 0 0 60217056 HCD 30 MS2 24.44075 959.3 31.165 47.7167 12609 12609 12605 QEplus033719.raw F4 936.3 991.8 1040.5 760.1 1102.7 924.2 355 3.49 1 FALSE 1.14E-05 3.99E-07 1.313 -250 50281 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NREASLGEASK [K].nREASLGEASk.[L] N-Term(TMT6plex); K11(TMT6plex) 4 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q62261; A0A0A0MQG2; Q5DTR4; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; MKIAA4049 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 1 3 3 0.5727 0 1 1 1 540.64282 1619.91391 1619.9117 1.36 0.00074 0/0 0 0 9447088 HCD 30 MS2 39.58983 1035.3 110 47.7217 12611 12611 12605 QEplus033719.raw F4 1166.2 861.6 1150.7 782.4 1214.1 1036.6 467 4.33 2 FALSE 1.14E-05 4.18E-09 1.689 -250 50297 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVQEEISR [K].qVQEEISR.[M] N-Term(TMT6plex) 6 Q6ZQC2 MKIAA0410 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0410 PE=2 SV=1 Q6ZQC2; Q3UZQ6; Q8R332-3; Q8R332-4; Q8R332-2; Q8R332 MKIAA0410 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0410 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Isoform 3 of Nucleoporin p58/p45 OS=Mus musculus OX=10090 GN=Nup58; Isoform 4 of Nucleoporin p58/p45 OS=Mus musculus OX=10090 GN=Nup58; Isoform 2 of Nucleoporin p58/p45 OS=Mus musculus OX=10090 GN=Nup58; Nucleoporin p58/p45 OS=Mus musculus OX=10090 GN=Nup58 PE=1 SV=1 0 2 2 0.2883 0 1 1 1 609.33801 1217.66875 1217.66873 0.01 0.00001 0/0 0 0 4024734.25 HCD 30 MS2 27.39525 433 110 47.7267 12613 12613 12605 QEplus033719.raw F4 450 395.4 460.8 329.9 538.9 422.8 328 2.74 1 FALSE 1.14E-05 0.00096 0.666 -250 50311 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAGTDDHTLIR [K].gAGTDDHTLIR.[V] N-Term(TMT6plex) 1 P48036 Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 P48036 Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 0 3 3 0.6667 0 1 1 1 462.25165 1384.74039 1384.73821 1.58 0.00073 0/0 0 0 16466822 HCD 30 MS2 45.9262 885.4 83.937 47.7387 12617 12617 12616 QEplus033719.raw F4 1223.2 720.8 900.9 639.9 958 869.8 216 3.69 1 FALSE 1.14E-05 8.92E-08 1.437 -250 50319 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGGGLGGTRR [R].lGGGLGGTRR.[G] N-Term(TMT6plex) 4 A2RS68 U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 A0A1B0GR50; A2RS68; Q9CR32; A0A1B0GSX5 U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=3; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1 1 3 3 0.5121 0 1 1 1 391.57349 1172.70591 1172.70612 -0.18 -0.00007 0/0 0 0 10623015 HCD 30 MS2 46.8053 618 86.512 47.741 12618 12618 12616 QEplus033719.raw F4 642.8 517.9 634.9 508.7 710.6 693.3 425 3.3 1 FALSE 1.14E-05 0.0004687 0.728 -250 50328 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQLEEETK [K].rQLEEETk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 P13542 Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; B1AR69; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 3 3 0.447 0 1 1 1 497.62506 1490.86063 1490.85788 1.85 0.00092 0/0 0 0 43725844 HCD 30 MS2 30.97714 910.7 27.146 47.7432 12619 12619 12616 QEplus033719.raw F4 1078.8 433.9 674 1450 584.8 1242.4 485 3.02 1 FALSE 1.14E-05 4.52E-05 0.923 -250 50334 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MFGGSGTSSRPSSNR [R].mFGGSGTSSRPSSNR.[S] N-Term(TMT6plex) 8 Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; A2AKJ2; Q3U6S1; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 3 3 0.6174 0 1 1 1 586.28912 1756.85282 1756.8598 -3.97 -0.00233 0/0 0 0 16820380 HCD 30 MS2 21.17629 620 110 47.748 12621 12621 12616 QEplus033719.raw F4 688.3 587.5 657.1 461.5 772.1 553.6 120 2.3 1 FALSE 1.14E-05 9.40E-05 0.862 -250 50359 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEQSPVK [K].eEQSPVk.[A] N-Term(TMT6plex); K7(TMT6plex) 6 B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 A0PJ96; P14873; Q3TZM8; Q8CAI9; B2RQQ5; Q8CFR9 Mtap1b protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Mtap1b protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 0 2 2 0.2816 0 1 1 1 637.87152 1274.73577 1274.73564 0.1 0.00006 0/0 0 0 6172198 HCD 30 MS2 34.35006 813.3 110 47.7579 12625 12625 12616 QEplus033719.raw F4 888.3 550 853.7 765.7 875.5 946.8 456 2.45 1 FALSE 0.0003496 0.006722 0.464 -250 50364 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQLEEETK [K].rQLEEETk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 P13542 Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; B1AR69; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 2 2 0.3855 0 1 1 1 745.93353 1490.85979 1490.85788 1.28 0.00096 0/0 0 0 5427017.5 HCD 30 MS2 25.92289 346.2 110 47.7604 12626 12626 12616 QEplus033719.raw F4 425.5 184.8 240.7 520.6 234.6 471.1 478 1.79 1 FALSE 0.0002119 0.004324 0.518 -250 50379 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RCQYVTEK [K].rcQYVTEk.[V] N-Term(TMT6plex); C2(Carbamidomethyl); K8(TMT6plex) 5 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 D3YWI1; P05063; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase C OS=Mus musculus OX=10090 GN=Aldoc PE=1 SV=4; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 1 3 3 0.4661 0 1 1 1 514.62262 1541.85331 1541.85102 1.48 0.00076 0/0 0 0 116435040 HCD 30 MS2 5.982618 921.6 14.223 47.7747 12631 12631 12627 QEplus033719.raw F4 915.3 561.9 976.2 1176 715.2 1185 387 3.84 1 FALSE 1.14E-05 7.03E-06 1.077 -250 50385 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQNPSDRK [K].lQNPSDRk.[V] N-Term(TMT6plex); K8(TMT6plex) 1 Q9WV55 Vesicle-associated membrane protein-associated protein A OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=2 Q9WV55 Vesicle-associated membrane protein-associated protein A OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=2 1 3 3 0.4104 0 1 1 1 472.61749 1415.83792 1415.83708 0.59 0.00028 0/0 0 0 97123480 HCD 30 MS2 15.86207 703.4 11.959 47.777 12632 12632 12627 QEplus033719.raw F4 693.1 521.9 743.3 689.8 791.2 780.9 370 2.51 1 FALSE 0.0002814 0.005589 0.488 -250 50411 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HPFAQAVGR [R].hPFAQAVGR.[N] N-Term(TMT6plex) 3 Q91VA7 "Isocitrate dehydrogenase [NAD] subunit, mitochondrial OS=Mus musculus OX=10090 GN=Idh3b PE=1 SV=1" Q91VA7; V9GXV0; A0A668KL51 "Isocitrate dehydrogenase [NAD] subunit, mitochondrial OS=Mus musculus OX=10090 GN=Idh3b PE=1 SV=1; Isocitrate dehydrogenase 3 (NAD+) beta (Fragment) OS=Mus musculus OX=10090 GN=Idh3b PE=1 SV=1; Isocitrate dehydrogenase [NAD] subunit, mitochondrial OS=Mus musculus OX=10090 GN=Idh3b PE=1 SV=1" 0 3 3 0.5581 0 1 1 1 404.56757 1211.68814 1211.68466 2.88 0.00116 0/0 0 0 25412808 HCD 30 MS2 30.74853 265.6 33.363 47.7859 12636 12636 12627 QEplus033719.raw F4 295.6 205.7 285.7 253.7 250.7 302.1 250 3.44 1 FALSE 1.14E-05 1.70E-05 1.004 -250 50421 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNPEVQK [K].sNPEVQk.[K] N-Term(TMT6plex); K7(TMT6plex) 1 A2AUC9 Kelch-like protein 41 OS=Mus musculus OX=10090 GN=Klhl41 PE=1 SV=1 A2AUC9 Kelch-like protein 41 OS=Mus musculus OX=10090 GN=Klhl41 PE=1 SV=1 0 2 2 0.5573 0 1 1 1 630.37244 1259.7376 1259.73597 1.29 0.00081 0/0 0 0 16493307 HCD 30 MS2 16.83564 907.1 110 47.7885 12637 12637 12627 QEplus033719.raw F4 1342.4 237.7 825.4 1513.5 267 1256.4 403 2.53 1 FALSE 0.0005174 0.008098 0.437 -250 50434 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRGEVASDAK [K].vRGEVASDAk.[RS] N-Term(TMT6plex); K10(TMT6plex) 2 P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 A0A2R8VHJ0; P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=1; Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 1 3 3 0.5523 0 1 1 1 497.29663 1489.87534 1489.87386 0.99 0.00049 0/0 0 0 146383200 HCD 30 MS2 2.722928 1080.1 11.141 47.8005 12641 12641 12638 QEplus033719.raw F4 1319.5 778.7 861.8 1310.2 1063 1147.5 460 4.4 1 FALSE 1.14E-05 2.66E-07 1.347 -250 50451 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SINNAEK [K].sINNAEk.[R] N-Term(TMT6plex); K7(TMT6plex) 4 Q5M9M4 40S ribosomal protein S15a OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=1 D3Z712; D3YVB4; F8WJ41; Q5M9M4 40S ribosomal protein S15a (Fragment) OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=2; 40S ribosomal protein S15a (Fragment) OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=1; 40S ribosomal protein S15a (Fragment) OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=1; 40S ribosomal protein S15a OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=1 0 2 2 0.4337 0 1 1 1 617.36389 1233.72051 1233.72032 0.15 0.00009 0/0 0 0 35730560 HCD 30 MS2 24.16574 1053.4 53.838 47.805 12643 12643 12638 QEplus033719.raw F4 1971.2 686.3 1153.7 741 611.2 1157 573 2.49 1 FALSE 0.0004191 0.007434 0.45 -250 50478 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYRDVDK [K].eYRDVDk.[K] N-Term(TMT6plex); K7(TMT6plex) 5 Q3U0U5 Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1 Q3UNQ0; Q3TC53; P40124; Q3U0U5; Q3UVJ2 Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein 1 OS=Mus musculus OX=10090 GN=Cap1 PE=1 SV=4; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1 1 3 3 0.4578 0 1 1 1 461.59457 1382.76917 1382.768 0.84 0.00039 0/0 0 0 18128046 HCD 30 MS2 41.52185 980 86.149 47.8118 12646 12646 12638 QEplus033719.raw F4 1086.8 833.9 1012.6 838.9 1193.6 914.2 369 2.25 1 FALSE 0.003658 0.07003 0.088 -250 50486 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRGEVASDAK [K].vRGEVASDAk.[RS] N-Term(TMT6plex); K10(TMT6plex) 2 P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 A0A2R8VHJ0; P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=1; Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 1 2 2 0.5287 0 1 1 1 745.4411 1489.87493 1489.87386 0.71 0.00053 0/0 0 0 14366884 HCD 30 MS2 0 720.4 110 47.8143 12647 12647 12638 QEplus033719.raw F4 885.3 517.3 612.4 780.8 761.5 765 465 3.14 1 FALSE 1.14E-05 0.0001583 0.819 -250 50491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMGYVQQR [R].nMGYVQQR.[R] N-Term(TMT6plex) 2 A0A140LHA2 Mitotic checkpoint protein BUB3 OS=Mus musculus OX=10090 GN=Bub3 PE=1 SV=1 A0A140LHA2; Q9WVA3 Mitotic checkpoint protein BUB3 OS=Mus musculus OX=10090 GN=Bub3 PE=1 SV=1; Mitotic checkpoint protein BUB3 OS=Mus musculus OX=10090 GN=Bub3 PE=1 SV=2 0 2 2 0.6423 0 1 1 1 612.82129 1224.6353 1224.63566 -0.29 -0.00018 0/0 0 0 13208607 HCD 30 MS2 22.9559 841.3 110 47.8168 12648 12648 12638 QEplus033719.raw F4 865.3 801.9 909.5 657 981 832.8 192 2.74 1 FALSE 1.14E-05 0.0004154 0.738 -250 50513 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RCQYVTEK [K].rcQYVTEk.[V] N-Term(TMT6plex); C2(Carbamidomethyl); K8(TMT6plex) 5 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 D3YWI1; P05063; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase C OS=Mus musculus OX=10090 GN=Aldoc PE=1 SV=4; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 1 2 2 0.5764 0 1 1 1 771.42999 1541.85271 1541.85102 1.1 0.00084 0/0 0 0 34407536 HCD 30 MS2 5.354031 455.6 41.425 47.8309 12653 12653 12649 QEplus033719.raw F4 439.8 284.5 468.7 602.7 327.4 610.8 387 3.14 1 FALSE 2.26E-05 0.001115 0.652 -250 50523 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRPGNALEK [K].nRPGNALEk.[E] N-Term(TMT6plex); K9(TMT6plex) 5 Q9CZ13 "Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrc1 PE=1 SV=2" Q3THM1; Q8K2S8; Q9CZ13; A0A0A6YW82; Q3TIC8 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Uqcrc1 PE=2 SV=1; Uqcrc1 protein OS=Mus musculus OX=10090 GN=Uqcrc1 PE=2 SV=1; Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrc1 PE=1 SV=2; Cytochrome b-c1 complex subunit 1, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Uqcrc1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Uqcrc1 PE=2 SV=1" 0 3 3 0.6257 0 1 1 1 486.29333 1456.86545 1456.86363 1.25 0.00061 0/0 0 0 22472632 HCD 30 MS2 13.03713 1024.4 64.789 47.8354 12655 12655 12649 QEplus033719.raw F4 1131.6 705.2 1053.2 1167.8 869.2 1219.7 333 3.5 1 FALSE 1.14E-05 2.36E-05 0.977 -250 50529 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYEEVAR [R].kYEEVAR.[K] N-Term(TMT6plex); K1(TMT6plex) 38 E9Q456; G5E8R2; G5E8R1; P58774; Q8C7C3; A2AIM4; Q58E70; P58774-2; E9Q5J9; A0A0R4J1P2; E9Q450; Q6IRU2 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 E9Q456; Q9D1R6; E9Q455; G5E8R2; E9Q453; Q91VH3; G5E8R1; Q8BSH3; A0A571BEU1; D3Z6I8; E9Q452; P58774; F8WID5; A2RRI1; Q8C7C3; A2AIM4; Q3TJ53; Q58E70; D3Z2H9; Q3SX28; P58774-2; E9Q454; Q61344; E9Q5J9; A0A0R4J1P2; E9Q448; P21107; E9Q450; Q8K0Z5; G5E8R0; D3YVR0; Q564G1; B7ZNL3; Q8BP43; Q6IRU2; E9Q7Q3; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin 3, related sequence 7 OS=Mus musculus OX=10090 GN=Tpm3-rs7 PE=3 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=3; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 3, gamma OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 1 3 3 0.4167 0 1 1 1 451.60287 1352.79407 1352.79382 0.18 0.00008 0/0 0 0 16810668 HCD 30 MS2 24.78291 1368.7 110 47.8379 12656 12656 12649 QEplus033719.raw F4 1548.9 986.8 1351.7 1471.6 1205.3 1648.2 371 2.28 12 TRUE 0.001125 0.01483 0.335 -250 50534 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHELPK [R].aHELPk.[R] N-Term(TMT6plex); K6(TMT6plex) 3 A0A0G2JE75 Bone morphogenetic protein 3 OS=Mus musculus OX=10090 GN=Bmp3 PE=1 SV=1 A0A0G2JE75; A0A0G2JEU2; Q8BHE5 Bone morphogenetic protein 3 OS=Mus musculus OX=10090 GN=Bmp3 PE=1 SV=1; Bone morphogenetic protein 3 OS=Mus musculus OX=10090 GN=Bmp3 PE=1 SV=1; Bone morphogenetic protein 3 OS=Mus musculus OX=10090 GN=Bmp3 PE=1 SV=1 0 3 3 0.4227 0 1 1 1 384.90964 1152.71436 1152.71411 0.21 0.00008 0/0 0 0 11319473 HCD 30 MS2 47.31506 828.7 73.04 47.8402 12657 12657 12649 QEplus033719.raw F4 962.5 594.9 817.4 807.1 858.9 931.4 141 2.91 1 FALSE 0.001615 0.02633 0.236 -250 50549 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQNPSDRK [K].lQNPSDRk.[V] N-Term(TMT6plex); K8(TMT6plex) 1 Q9WV55 Vesicle-associated membrane protein-associated protein A OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=2 Q9WV55 Vesicle-associated membrane protein-associated protein A OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=2 1 2 2 0.5117 0 1 1 1 708.42273 1415.83818 1415.83708 0.78 0.00055 0/0 0 0 8399515 HCD 30 MS2 0 276 110 47.8452 12659 12659 12649 QEplus033719.raw F4 259.4 206.5 290.7 271.3 322.7 305.6 380 2.56 1 FALSE 0.001719 0.02877 0.223 -250 50564 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQEEPPAK [K].aQEEPPAk.[L] N-Term(TMT6plex); K8(TMT6plex) 12 Q80TU6 MKIAA0670 protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1 Q7TSL7; Q9JIX8; Q3UXT9; B8JJ91; B8JJ92; Q9JIX8-2; F6Q8C0; Q9JIX8-4; Q9JIX8-3; F6RJ39; Q52KR6; Q80TU6 Apoptotic chromatin condensation inducer 1 OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1; Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=3; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1; Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Isoform 2 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Apoptotic chromatin condensation inducer in the nucleus (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Isoform 4 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Isoform 3 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Apoptotic chromatin condensation inducer in the nucleus (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Acin1 protein OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; MKIAA0670 protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1 0 2 2 0.2351 0 1 1 1 664.3855 1327.76372 1327.76219 1.15 0.00077 0/0 0 0 6018525.5 HCD 30 MS2 0 454 110 47.8551 12662 12662 12660 QEplus033719.raw F4 532.7 395.9 471.7 346.4 569.4 407.7 335 3.36 1 FALSE 4.43E-05 0.001532 0.624 -250 50572 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DFTSEPR [R].dFTSEPR.[L] N-Term(TMT6plex) 8 Q3UIJ2 Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1 Q9CRE9; A2AAW9; Q3UIJ2; Q3UDF8; Q3U5H6; Q3TML6; Q9D791; Q9Z0N2 "Protein-synthesizing GTPase (Fragment) OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Eukaryotic translation initiation factor 2 subunit 3, X-linked OS=Mus musculus OX=10090 GN=Eif2s3x PE=1 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase (Fragment) OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=1 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3y PE=2 SV=1; Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Mus musculus OX=10090 GN=Eif2s3y PE=1 SV=2" 0 2 2 0.4903 0 1 1 1 540.78027 1080.55327 1080.5523 0.89 0.00048 0/0 0 0 27851156 HCD 30 MS2 39.94002 1125.2 73.142 47.8573 12663 12663 12660 QEplus033719.raw F4 1347.5 899.9 1187.4 895 1219.3 1202 170 2.59 1 FALSE 0.0002719 0.005396 0.492 -250 50585 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRGEVASDAK [K].vRGEVASDAk.[RS] N-Term(TMT6plex); K10(TMT6plex) 2 P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 A0A2R8VHJ0; P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=1; Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 1 4 4 0.4643 0 1 1 1 373.2243 1489.87539 1489.87386 1.02 0.00038 0/0 0 0 8795190 HCD 30 MS2 54.09516 655.2 59.586 47.8643 12666 12666 12660 QEplus033719.raw F4 750.5 537.8 672 539.1 748.7 683.2 460 3.08 1 FALSE 1.14E-05 0.0004322 0.735 -250 50607 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYEEVAR [R].kYEEVAR.[K] N-Term(TMT6plex); K1(TMT6plex) 38 E9Q456; G5E8R2; G5E8R1; P58774; Q8C7C3; A2AIM4; Q58E70; P58774-2; E9Q5J9; A0A0R4J1P2; E9Q450; Q6IRU2 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 E9Q456; Q9D1R6; E9Q455; G5E8R2; E9Q453; Q91VH3; G5E8R1; Q8BSH3; A0A571BEU1; D3Z6I8; E9Q452; P58774; F8WID5; A2RRI1; Q8C7C3; A2AIM4; Q3TJ53; Q58E70; D3Z2H9; Q3SX28; P58774-2; E9Q454; Q61344; E9Q5J9; A0A0R4J1P2; E9Q448; P21107; E9Q450; Q8K0Z5; G5E8R0; D3YVR0; Q564G1; B7ZNL3; Q8BP43; Q6IRU2; E9Q7Q3; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin 3, related sequence 7 OS=Mus musculus OX=10090 GN=Tpm3-rs7 PE=3 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=3; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 3, gamma OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 1 2 2 0.6275 0 1 1 1 676.90259 1352.7979 1352.79382 3.01 0.00204 0/0 0 0 4822786 HCD 30 MS2 0 393.1 110 47.8718 12669 12669 12660 QEplus033719.raw F4 419.1 281.8 389.8 418.6 358.6 490.6 308 2.55 12 TRUE 0.00079 0.01088 0.39 -250 50614 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QNAQCLHGDIAQSQR [K].qNAQcLHGDIAQSQR.[E] N-Term(TMT6plex); C5(Carbamidomethyl) 3 Q99MJ9 ATP-dependent RNA helicase DDX50 OS=Mus musculus OX=10090 GN=Ddx50 PE=2 SV=1 Q99MJ9; Q5BKP5; Q8BRU5 ATP-dependent RNA helicase DDX50 OS=Mus musculus OX=10090 GN=Ddx50 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx50 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx50 PE=2 SV=1 0 3 3 0.661 0 1 1 1 652.33069 1954.97751 1954.97147 3.09 0.00201 0/0 0 0 2277524.75 HCD 30 MS2 24.77407 204 110 47.8743 12670 12670 12660 QEplus033719.raw F4 213.1 201.7 219.2 155.8 226.5 207.6 223 5.31 1 FALSE 1.14E-05 9.70E-12 2.189 -250 50621 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGGSLPPQAR [K].eGGSLPPQAR.[S] N-Term(TMT6plex) 3 E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.552 0 1 1 1 620.84808 1240.68889 1240.68472 3.36 0.00209 0/0 0 0 4140998.25 HCD 30 MS2 27.98187 349.6 110 47.8817 12672 12672 12671 QEplus033719.raw F4 288.1 248.9 348.7 325.8 519.9 366.3 264 2.5 1 FALSE 1.14E-05 0.0001881 0.805 -250 50630 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GFTHTLR [R].gFTHTLR.[Q] N-Term(TMT6plex) 2 S4R1X1 WD repeat-containing protein 91 OS=Mus musculus OX=10090 GN=Wdr91 PE=1 SV=1 S4R1X1; Q7TMQ7 WD repeat-containing protein 91 OS=Mus musculus OX=10090 GN=Wdr91 PE=1 SV=1; WD repeat-containing protein 91 OS=Mus musculus OX=10090 GN=Wdr91 PE=1 SV=1 0 3 3 0.2255 0 1 1 1 354.20871 1060.61158 1060.61009 1.4 0.00049 0/0 0 0 4111156.25 HCD 30 MS2 62.27226 489.2 110 47.8841 12673 12673 12671 QEplus033719.raw F4 566 350.6 449.6 479.3 538.7 550.9 342 2.35 1 FALSE 0.001074 0.01398 0.346 -250 50636 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LYQAGEGR [R].lYQAGEGR.[L] N-Term(TMT6plex) 6 Q922A2 Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1 Q922A2; Q3UYL7; Q07076; Q3TJ49; A0A2C9F2D2; Q8CCV9 Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1; Annexin A7 OS=Mus musculus OX=10090 GN=Anxa7 PE=1 SV=2; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1 0 2 2 0.5559 0 1 1 1 561.80988 1122.61247 1122.61049 1.77 0.00099 0/0 0 0 75513680 HCD 30 MS2 17.12431 520.7 18.381 47.8864 12674 12674 12671 QEplus033719.raw F4 555.3 441 577.6 519.2 484.5 546.4 228 3.22 1 FALSE 1.14E-05 0.000247 0.782 -250 50645 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGDDDVR [K].lGDDDVR.[T] N-Term(TMT6plex) 2 Q60865 Caprin-1 OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=2 Q3UFZ6; Q60865 Caprin-1_dimer domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Caprin1 PE=2 SV=1; Caprin-1 OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=2 0 2 2 0.2789 0 1 1 1 509.77325 1018.53923 1018.53665 2.53 0.00129 0/0 0 0 30153914 HCD 30 MS2 48.47477 730.4 29.686 47.8887 12675 12675 12671 QEplus033719.raw F4 998.6 490.8 718.5 570.1 706.4 898.3 269 2.51 1 FALSE 0.002439 0.04852 0.147 -250 50651 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DEMVPR [K].dEMVPR.[L] N-Term(TMT6plex) 1 Q8BK67 Protein RCC2 OS=Mus musculus OX=10090 GN=Rcc2 PE=1 SV=1 Q8BK67 Protein RCC2 OS=Mus musculus OX=10090 GN=Rcc2 PE=1 SV=1 0 2 2 0.3604 0 1 1 1 488.26102 975.51476 975.51308 1.72 0.00084 0/0 0 0 18817440 HCD 30 MS2 50.45738 918.8 69.816 47.8909 12676 12676 12671 QEplus033719.raw F4 1556.4 603.6 795.7 675.5 871.4 1010 156 1.97 1 FALSE 0.00459 0.08119 0.058 -250 50666 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEQISDLDR [R].hEQISDLDR.[L] N-Term(TMT6plex) 4 Q3TW28 Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2 PE=2 SV=1 Q64514; Q64514-2; Q3TW28; Q3TB11 Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2 PE=1 SV=3; Isoform Short of Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2; Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2 PE=2 SV=1; Tripeptidyl-peptidase 2 (Fragment) OS=Mus musculus OX=10090 GN=Tpp2 PE=2 SV=1 0 3 3 0.5128 0 1 1 1 447.90381 1341.69687 1341.69601 0.64 0.00029 0/0 0 0 15657918 HCD 30 MS2 25.30886 622.9 82.562 47.8954 12678 12678 12671 QEplus033719.raw F4 623.3 496.5 646.7 509.5 725.4 735.7 167 3.51 1 FALSE 7.59E-05 0.00282 0.564 -250 50721 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSVTDPAMAPR [K].rSVTDPAMAPR.[T] N-Term(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 1 3 3 0.5079 0 1 1 1 477.26492 1429.78022 1429.7783 1.34 0.00064 0/0 0 0 29887512 HCD 30 MS2 48.33553 559.3 42.163 47.9167 12686 12686 12682 QEplus033719.raw F4 573.1 395.9 623.9 486.5 578.1 698.5 313 3.15 1 FALSE 1.14E-05 1.18E-08 1.604 -250 50724 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGQELSVAR [R].qGQELSVAR.[Q] N-Term(TMT6plex) 2 A0A498WFS2 UBX domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ubxn1 PE=1 SV=1 A0A498WFS2; Q922Y1 UBX domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ubxn1 PE=1 SV=1; UBX domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ubxn1 PE=1 SV=1 0 2 2 0.6366 0 1 1 1 608.84753 1216.68779 1216.68472 2.53 0.00154 0/0 0 0 25232874 HCD 30 MS2 11.8585 632.4 76.879 47.919 12687 12687 12682 QEplus033719.raw F4 669.9 534.7 643.3 512.1 792.4 641.8 326 3.44 1 FALSE 1.14E-05 1.87E-06 1.186 -250 50730 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAFAEAR [K].aAFAEAR.[R] N-Term(TMT6plex) 8 A0A0G2JEX1; A0A0G2JDY6 Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1;Nexilin (Fragment) OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=4 A0A0G2JDZ8; A0A0G2JEX1; A0A0G2JDY6; Q7TPW1; A0A0G2JG59; G4W8R2; G4W8R4; A0A0G2JFD8 Nexilin (Fragment) OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin (Fragment) OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=4; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=3; Nexilin (Fragment) OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin alpha OS=Mus musculus OX=10090 GN=Nexn PE=2 SV=1; Nexilin gamma OS=Mus musculus OX=10090 GN=Nexn PE=2 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1 0 2 2 0.2262 0 1 1 1 482.77512 964.54296 964.54135 1.67 0.0008 0/0 0 0 24247618 HCD 30 MS2 20.06741 1017.5 91.397 47.9213 12688 12688 12682 QEplus033719.raw F4 1056.3 617.4 1176.3 939.8 816.7 1498.3 154 2.52 2 FALSE 0.0002119 0.004372 0.517 -250 50738 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLPSHTK [R].dLPSHTk.[I] N-Term(TMT6plex); K7(TMT6plex) 2 Q9JHS9 Spliceosome-associated protein CWC15 homolog OS=Mus musculus OX=10090 GN=Cwc15 PE=1 SV=1 Q9JHS9; A0A1L1SVD8 Spliceosome-associated protein CWC15 homolog OS=Mus musculus OX=10090 GN=Cwc15 PE=1 SV=1; Spliceosome-associated protein CWC15 homolog (Fragment) OS=Mus musculus OX=10090 GN=Cwc15 PE=1 SV=1 0 3 3 0.3091 0 1 1 1 419.25266 1255.74341 1255.74106 1.87 0.00078 0/0 0 0 20932174 HCD 30 MS2 25.64103 506.3 55.75 47.9235 12689 12689 12682 QEplus033719.raw F4 566 407.2 480 406.3 677.1 501.4 264 3.17 1 FALSE 0.0008718 0.01193 0.374 -250 50748 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RALEAEK [R].rALEAEk.[RN] N-Term(TMT6plex); K7(TMT6plex) 6 Q6P5H2; Q80U72 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1;Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib PE=1 SV=2 Q80U72-4; Q80U72-2; Q6P5H2; Q80U72-3; Q6P5H2-2; Q80U72 Isoform 4 of Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib; Isoform 2 of Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib; Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 3 of Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes; Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib PE=1 SV=2 1 3 3 0.2296 0 1 1 1 425.59949 1274.78391 1274.78326 0.51 0.00022 0/0 0 0 18159878 HCD 30 MS2 46.44944 741.1 47.411 47.9283 12691 12691 12682 QEplus033719.raw F4 1184 349.6 717.7 889.4 563.3 742.8 608 3.31 2 FALSE 0.0009633 0.01307 0.358 -250 50754 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAAEGFK [KR].rAAEGFk.[G] N-Term(TMT6plex); K7(TMT6plex) 13 P09103 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2 P09103; Q3URP6; Q3TWE3; Q3U738; Q3TT76; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; Q3UA23; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 1 3 3 0.3515 0 1 1 1 412.9191 1236.74274 1236.74648 -3.02 -0.00125 0/0 0 0 12389815 HCD 30 MS2 31.91815 771.3 110 47.9308 12692 12692 12682 QEplus033719.raw F4 809.8 630.1 815.8 631 912.6 828.6 280 2.39 1 FALSE 0.002309 0.04584 0.155 -250 50761 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATVHDPETGK [R].aTVHDPETGk.[L] N-Term(TMT6plex); K10(TMT6plex) 3 Q60715-2 Isoform 2 of Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1 E9Q7B0; Q60715-2; Q3TTT2 Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=1 SV=1; Isoform 2 of Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1 0 3 3 0.558 0 1 1 1 504.95071 1512.83759 1512.84223 -3.07 -0.00155 0/0 0 0 8545191 HCD 30 MS2 41.98458 769 110 47.9381 12694 12694 12693 QEplus033719.raw F4 940.8 585.4 719.5 788.6 843.9 735.7 348 3.71 1 FALSE 1.14E-05 0.0007454 0.688 -250 50778 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVSTESGENEEK [R].nVSTESGENEEk.[S] N-Term(TMT6plex); K12(TMT6plex) 12 B8X349 JNK-interacting leucine zipper protein long form OS=Mus musculus OX=10090 GN=Spag9 PE=2 SV=1 F6WNT4; B8X349; E9PUD1; Q58A65-3; A0A0R4J196; Q58A65; F6SH61; Q58A65-6; Q58A65-2; Q58A65-5; Q58A65-4; F8WH31 C-Jun-amino-terminal kinase-interacting protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=1; JNK-interacting leucine zipper protein long form OS=Mus musculus OX=10090 GN=Spag9 PE=2 SV=1; C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=1; Isoform 3 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=1; C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=2; C-Jun-amino-terminal kinase-interacting protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=1; Isoform 6 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; Isoform 2 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; Isoform 5 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; Isoform 4 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=2 0 3 3 0.7366 0 1 1 1 594.30499 1780.90042 1780.89651 2.2 0.00131 0/0 0 0 6371253 HCD 30 MS2 0 268.3 110 47.9431 12696 12696 12693 QEplus033719.raw F4 258.3 223.1 310 237.8 277.2 303.6 227 4.86 1 FALSE 1.14E-05 2.16E-06 1.174 -250 50799 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNMQSGVNNTK [R].nNMQSGVNNTk.[K] N-Term(TMT6plex); K11(TMT6plex) 5 Q9CXZ1 "NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs4 PE=1 SV=3" A0A338P7A0; Q9CTT4; Q9CXZ1; E9QPX3; Q923F9 "NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Ndufs4 PE=1 SV=1; NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Ndufs4 PE=2 SV=3; NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs4 PE=1 SV=3; NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs4 PE=1 SV=1; NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs4 PE=2 SV=1" 0 3 3 0.6939 0 1 1 1 555.63153 1664.88004 1664.87902 0.61 0.00034 0/0 0 0 12355268 HCD 30 MS2 23.34159 534 110 47.9506 12699 12699 12693 QEplus033719.raw F4 592.1 392 556.7 529.6 526.2 607.3 365 4.41 1 FALSE 1.14E-05 2.56E-05 0.97 -250 50810 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFGGPGAR [K].kFGGPGAR.[A] N-Term(TMT6plex); K1(TMT6plex) 3 Q641N3 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 Q641N3; P14131; Q5CZY9 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1; 40S ribosomal protein S16 OS=Mus musculus OX=10090 GN=Rps16 PE=1 SV=4; Rps16 protein OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 1 2 2 0.6786 0 1 1 1 624.3858 1247.76433 1247.76246 1.5 0.00093 0/0 0 0 9749550 HCD 30 MS2 8.474014 596.1 110 47.9556 12701 12701 12693 QEplus033719.raw F4 636 463.2 637.1 519.2 684.1 637.3 401 1.96 1 FALSE 0.001421 0.02039 0.278 -250 50821 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATVHDPETGK [R].aTVHDPETGk.[L] N-Term(TMT6plex); K10(TMT6plex) 3 Q60715-2 Isoform 2 of Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1 E9Q7B0; Q60715-2; Q3TTT2 Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=1 SV=1; Isoform 2 of Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1 0 3 3 0.6096 0 1 1 1 504.95071 1512.83759 1512.84223 -3.07 -0.00155 0/0 0 0 8545191 HCD 30 MS2 41.98458 769 110 47.9606 12703 12703 12693 QEplus033719.raw F4 940.8 585.4 719.5 788.6 843.9 735.7 348 3.74 1 FALSE 1.14E-05 8.41E-05 0.871 -250 50828 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNMQSGVNNTK [R].nNMQSGVNNTk.[K] N-Term(TMT6plex); K11(TMT6plex) 5 Q9CXZ1 "NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs4 PE=1 SV=3" A0A338P7A0; Q9CTT4; Q9CXZ1; E9QPX3; Q923F9 "NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Ndufs4 PE=1 SV=1; NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Ndufs4 PE=2 SV=3; NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs4 PE=1 SV=3; NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs4 PE=1 SV=1; NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs4 PE=2 SV=1" 0 2 2 0.7472 0 1 1 1 832.94379 1664.8803 1664.87902 0.76 0.00064 0/0 0 0 4213357.5 HCD 30 MS2 0 338 110 47.9679 12705 12705 12704 QEplus033719.raw F4 382 246.1 342.9 370.6 296.9 389.4 368 4.47 1 FALSE 1.14E-05 9.81E-11 1.999 -250 50836 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFGGPGAR [K].kFGGPGAR.[A] N-Term(TMT6plex); K1(TMT6plex) 3 Q641N3 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 Q641N3; P14131; Q5CZY9 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1; 40S ribosomal protein S16 OS=Mus musculus OX=10090 GN=Rps16 PE=1 SV=4; Rps16 protein OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 1 3 3 0.6575 0 1 1 1 416.59256 1247.76313 1247.76246 0.53 0.00022 0/0 0 0 156730192 HCD 30 MS2 11.61849 718.2 8.231 47.9727 12707 12707 12704 QEplus033719.raw F4 699.1 568.3 784.5 619 859 779.6 379 2.92 1 FALSE 1.14E-05 8.17E-05 0.874 -250 50846 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLSALHR [R].qLSALHR.[A] N-Term(TMT6plex) 3 Q5M8Q0 Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1 Q5M8Q0; Q3U7D2; B8JKK2 Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1; Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1; Ribosomal protein L15 (Fragment) OS=Mus musculus OX=10090 GN=Rpl15 PE=1 SV=1 0 3 3 0.1738 0 1 1 1 351.88391 1053.63718 1053.63664 0.51 0.00018 0/0 0 0 78008032 HCD 30 MS2 13.31704 279.1 16.99 47.9749 12708 12708 12704 QEplus033719.raw F4 291.9 206.1 261 297.1 391.7 226.5 61 3.97 1 FALSE 4.43E-05 0.001654 0.616 -250 50864 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQVLAGGR [K].aQVLAGGR.[G] N-Term(TMT6plex) 3 Q9Z2I9 "Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Sucla2 PE=1 SV=2" Q9Z2I9; Q3UCC6; Q3U6C7 "Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Sucla2 PE=1 SV=2; Succinate-CoA ligase subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Sucla2 PE=2 SV=1; Succinate-CoA ligase subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Sucla2 PE=2 SV=1" 0 2 2 0.2846 0 1 1 1 500.80835 1000.60942 1000.61009 -0.67 -0.00034 0/0 0 0 53732544 HCD 30 MS2 22.01949 800.6 26.793 47.9795 12710 12710 12704 QEplus033719.raw F4 751.9 521.4 871.9 939.1 567 1152.5 123 2.46 1 FALSE 1.14E-05 0.0003304 0.757 -250 50873 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APTAGSGQECSTQEK [K].aPTAGSGQEcSTQEk.[V] N-Term(TMT6plex); C10(Carbamidomethyl); K15(TMT6plex) 3 Q05CL8 La-related protein 7 OS=Mus musculus OX=10090 GN=Larp7 PE=1 SV=2 A3KML4; Q05CL8; I3PQW3 Larp7 protein (Fragment) OS=Mus musculus OX=10090 GN=Larp7 PE=2 SV=1; La-related protein 7 OS=Mus musculus OX=10090 GN=Larp7 PE=1 SV=2; La ribonucleoprotein domain family member 7 OS=Mus musculus OX=10090 GN=Larp7 PE=3 SV=1 0 3 3 0.7491 0 1 1 1 670.33954 2009.00406 2009.00099 1.53 0.00102 0/0 0 0 2364428.25 HCD 30 MS2 0 145 110 47.982 12711 12711 12704 QEplus033719.raw F4 153.6 126.2 147.8 110 173.7 158.9 211 5.58 1 FALSE 1.14E-05 2.83E-10 1.911 -250 50880 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVSTESGENEEK [R].nVSTESGENEEk.[S] N-Term(TMT6plex); K12(TMT6plex) 12 B8X349 JNK-interacting leucine zipper protein long form OS=Mus musculus OX=10090 GN=Spag9 PE=2 SV=1 F6WNT4; B8X349; E9PUD1; Q58A65-3; A0A0R4J196; Q58A65; F6SH61; Q58A65-6; Q58A65-2; Q58A65-5; Q58A65-4; F8WH31 C-Jun-amino-terminal kinase-interacting protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=1; JNK-interacting leucine zipper protein long form OS=Mus musculus OX=10090 GN=Spag9 PE=2 SV=1; C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=1; Isoform 3 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=1; C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=2; C-Jun-amino-terminal kinase-interacting protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=1; Isoform 6 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; Isoform 2 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; Isoform 5 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; Isoform 4 of C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9; C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus OX=10090 GN=Spag9 PE=1 SV=2 0 2 2 0.692 0 1 1 1 890.95282 1780.89836 1780.89651 1.04 0.00093 0/0 0 0 2295644.75 HCD 30 MS2 0 150.7 110 47.9845 12712 12712 12704 QEplus033719.raw F4 142.7 129.3 176.3 138.7 146.4 170.8 224 4.87 1 FALSE 1.14E-05 1.20E-12 2.362 -250 50895 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGYGGSSQAPNK [K].gGYGGSSQAPNk.[S] N-Term(TMT6plex); K12(TMT6plex) 2 Q91VX2 Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1 Q91VX2; A2AMY5 Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1; Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1 0 2 2 0.6586 0 1 1 1 790.92505 1580.84282 1580.84329 -0.3 -0.00023 0/0 0 0 4989946.5 HCD 30 MS2 0 274.4 110 47.9895 12714 12714 12704 QEplus033719.raw F4 291.5 219.9 314.6 218.5 273.1 328.8 346 3.31 1 FALSE 1.14E-05 5.26E-12 2.24 -250 50905 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSLRETTGSESDGGDSSSTK [K].sSLRETTGSESDGGDSSSTk.[S] N-Term(TMT6plex); K20(TMT6plex) 5 Q8R550-3 Isoform 3 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1 Q8R550-8; Q8R550-3; E9Q0C1; B1AZ85; Q3TA88 Isoform 8 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1; Isoform 3 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1; SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=1 SV=1; SH3 domain-containing kinase-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=2 SV=1 1 3 3 0.8432 0 1 1 1 816.07086 2446.19803 2446.19454 1.43 0.00116 0/0 0 0 1136915.375 HCD 30 MS2 0 109.1 110 47.9969 12716 12716 12715 QEplus033719.raw F4 102.7 130 152.7 67.8 109.1 92.2 187 4.21 1 FALSE 1.14E-05 6.31E-16 3.868 -250 50909 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYCTSAK [R].dYcTSAk.[H] N-Term(TMT6plex); C3(Carbamidomethyl); K7(TMT6plex) 6 Q99LD4 COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1 Q99LD4; Q99LD4-2; B1ATU4; G3UXW9; A0A140LJB7; Q3MIA8 COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1; Isoform 2 of COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1; COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1; COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1; COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1; COP9 signalosome complex subunit 1 OS=Mus musculus OX=10090 GN=Gps1 PE=1 SV=1 0 2 2 0.3851 0 1 1 1 651.84131 1302.67534 1302.67641 -0.82 -0.00053 0/0 0 0 2585907.5 HCD 30 MS2 34.87975 309.1 110 47.9994 12717 12717 12715 QEplus033719.raw F4 307.3 263.6 322.1 301.6 337.7 322 211 1.61 1 FALSE 0.001632 0.02661 0.235 -250 50942 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYESLSR [K].sYESLSR.[D] N-Term(TMT6plex) 1 Q8BJL1 F-box only protein 30 OS=Mus musculus OX=10090 GN=Fbxo30 PE=1 SV=2 Q8BJL1 F-box only protein 30 OS=Mus musculus OX=10090 GN=Fbxo30 PE=1 SV=2 0 2 2 0.2458 0 1 1 1 535.78802 1070.56877 1070.56795 0.76 0.00041 0/0 0 0 4157876 HCD 30 MS2 65.70315 785.3 110 48.0111 12722 12722 12715 QEplus033719.raw F4 1059.4 574.4 796.6 748.6 797.2 735.4 83 1.79 1 FALSE 0.001903 0.03238 0.205 -250 50966 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAVDNCQDSWRR [K].sAVDNcQDSWRR.[V] N-Term(TMT6plex); C6(Carbamidomethyl) 3 Q9DCD0 "6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=1 SV=3" Q9DCD0; Q3UAG2; Q91V28 "6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=1 SV=3; 6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=2 SV=1; 6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=2 SV=1" 1 3 3 0.7074 0 1 1 1 574.94421 1722.81809 1722.81793 0.09 0.00005 0/0 0 0 11435668 HCD 30 MS2 11.76789 479.7 110 48.0254 12727 12727 12726 QEplus033719.raw F4 585 449.8 544.7 358.1 484.3 456.4 86 4.75 1 FALSE 1.14E-05 4.09E-10 1.881 -250 50972 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTAEPHSASDAGMK [K].gTAEPHSASDAGMk.[R] N-Term(TMT6plex); K14(TMT6plex) 3 D6RFU2 2-arachidonoylglycerol hydrolase ABHD12 OS=Mus musculus OX=10090 GN=Abhd12 PE=1 SV=1 D6RFU2; Q99LR1; D6RI21 2-arachidonoylglycerol hydrolase ABHD12 OS=Mus musculus OX=10090 GN=Abhd12 PE=1 SV=1; Lysophosphatidylserine lipase ABHD12 OS=Mus musculus OX=10090 GN=Abhd12 PE=1 SV=2; Lysophosphatidylserine lipase ABHD12 OS=Mus musculus OX=10090 GN=Abhd12 PE=1 SV=1 0 3 3 0.7286 0 1 1 1 606.31561 1816.93229 1816.92637 3.26 0.00197 0/0 0 0 5613352 HCD 30 MS2 20.40292 417.3 110 48.0279 12728 12728 12726 QEplus033719.raw F4 408.4 312.9 438.3 402 531.5 410.5 238 4.2 1 FALSE 1.14E-05 2.23E-11 2.121 -250 50990 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YGTDLSR [K].yGTDLSR.[G] N-Term(TMT6plex) 2 Q8VDN2 Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1 Q3TXF9; Q8VDN2 Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1 0 2 2 0.5401 0 1 1 1 520.78241 1040.55754 1040.55739 0.15 0.00008 0/0 0 0 28466586 HCD 30 MS2 18.40154 928.3 86.474 48.0369 12732 12732 12726 QEplus033719.raw F4 879.8 768.4 1125.2 878.8 873 1044.5 65 2.37 1 FALSE 0.0008718 0.01214 0.371 -250 51002 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LMDQASR [K].lMDQASR.[A] N-Term(TMT6plex) 12 Q8BJV4 Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1 Q8BJV4; Q3TBP4; Q9QY36; B1AUY8; Q684Q8; B1AUY7; Q3V4D5; Q3UX61; Q8R2U5; B1AUY9; Q9CQX6; B1AUZ1 "Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; N-acetyltransferase domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; N-alpha-acetyltransferase 10 OS=Mus musculus OX=10090 GN=Naa10 PE=1 SV=1; N-alpha-acetyltransferase 10 OS=Mus musculus OX=10090 GN=Naa10 PE=1 SV=1; N-terminal acetyltransferase complex ARD1 subunit homolog (Fragment) OS=Mus musculus OX=10090 GN=Naa10 PE=2 SV=1; N-alpha-acetyltransferase 10 OS=Mus musculus OX=10090 GN=Naa10 PE=1 SV=1; N-alpha-acetyltransferase 10 OS=Mus musculus OX=10090 GN=Naa10 PE=1 SV=1; N-alpha-acetyltransferase 11 OS=Mus musculus OX=10090 GN=Naa11 PE=1 SV=1; Ard1a protein OS=Mus musculus OX=10090 GN=Naa10 PE=2 SV=1; N-alpha-acetyltransferase 10 OS=Mus musculus OX=10090 GN=Naa10 PE=1 SV=1; N(alpha)-acetyltransferase 12, NatA catalytic subunit OS=Mus musculus OX=10090 GN=Naa12 PE=1 SV=1; N-alpha-acetyltransferase 10 OS=Mus musculus OX=10090 GN=Naa10 PE=1 SV=1" 0 2 2 0.4679 0 1 1 1 525.28424 1049.5612 1049.5611 0.1 0.00005 0/0 0 0 24247264 HCD 30 MS2 6.271585 821.5 110 48.0417 12734 12734 12726 QEplus033719.raw F4 844.3 665.9 906.3 622.9 984.3 905.1 193 2.65 1 FALSE 0.0002419 0.00486 0.505 -250 51021 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGYGGSSQAPNK [K].gGYGGSSQAPNk.[S] N-Term(TMT6plex); K12(TMT6plex) 2 Q91VX2 Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1 Q91VX2; A2AMY5 Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1; Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1 0 3 3 0.6789 0 1 1 1 527.61945 1580.84378 1580.84329 0.31 0.00016 0/0 0 0 12971650 HCD 30 MS2 49.87997 708.3 110 48.0464 12736 12736 12726 QEplus033719.raw F4 770.8 591.2 726.4 718.4 857 585.9 349 4.08 1 FALSE 1.14E-05 7.54E-08 1.451 -250 51029 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPPNQVK [K].sPPNQVk.[E] N-Term(TMT6plex); K7(TMT6plex) 1 P45377 Aldose reductase-related protein 2 OS=Mus musculus OX=10090 GN=Akr1b8 PE=1 SV=2 P45377 Aldose reductase-related protein 2 OS=Mus musculus OX=10090 GN=Akr1b8 PE=1 SV=2 0 2 2 0.3125 0 1 1 1 614.37738 1227.74748 1227.74614 1.09 0.00067 0/0 0 0 6255659 HCD 30 MS2 29.27125 518.4 110 48.0537 12738 12738 12737 QEplus033719.raw F4 681 367.7 596 481.1 476.3 508.5 291 2.08 1 FALSE 0.004641 0.08206 0.056 -250 51036 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KEEEGQAGAAEMR [R].kEEEGQAGAAEMR.[E] N-Term(TMT6plex); K1(TMT6plex) 7 B0QZI8 CDK5 regulatory subunit-associated protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Cdk5rap3 PE=1 SV=1 B0QZI8; Q99LM2; Q3TSS9; Q3U506; Q3TLJ5; A2A6D9; A2A6E1 CDK5 regulatory subunit-associated protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Cdk5rap3 PE=1 SV=1; CDK5 regulatory subunit-associated protein 3 OS=Mus musculus OX=10090 GN=Cdk5rap3 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cdk5rap3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cdk5rap3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cdk5rap3 PE=2 SV=1; CDK5 regulatory subunit-associated protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Cdk5rap3 PE=1 SV=1; CDK5 regulatory subunit-associated protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Cdk5rap3 PE=1 SV=1 1 3 3 0.7201 0 1 1 1 621.99268 1863.96347 1863.96348 0 0 0/0 0 0 9947187 HCD 30 MS2 0 410.5 110 48.0563 12739 12739 12737 QEplus033719.raw F4 415.5 344.5 467 385.4 385.8 464.6 285 4.68 1 FALSE 1.14E-05 1.68E-15 2.904 -250 51047 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVVGNLHR [K].sVVGNLHR.[L] N-Term(TMT6plex) 3 E9QN31 Probable 28S rRNA (cytosine-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Nop2 PE=1 SV=1 E9QN31; Q99KC3; Q922K7 Probable 28S rRNA (cytosine-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Nop2 PE=1 SV=1; Nop2 protein OS=Mus musculus OX=10090 GN=Nop2 PE=2 SV=1; Probable 28S rRNA (cytosine-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Nop2 PE=1 SV=1 0 3 3 0.5771 0 1 1 1 370.89117 1110.65897 1110.65811 0.78 0.00029 0/0 0 0 16654017 HCD 30 MS2 27.48064 406.6 80.831 48.063 12742 12742 12737 QEplus033719.raw F4 509 293.2 438.5 325.3 495.4 378.4 154 3.76 1 FALSE 1.14E-05 3.93E-06 1.125 -250 51055 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAAEGFK [KR].rAAEGFk.[G] N-Term(TMT6plex); K7(TMT6plex) 13 P09103 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2 P09103; Q3URP6; Q3TWE3; Q3U738; Q3TT76; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; Q3UA23; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 1 2 2 0.3163 0 1 1 1 618.8772 1236.74712 1236.74648 0.52 0.00032 0/0 0 0 13876037 HCD 30 MS2 21.09015 788.1 110 48.0655 12743 12743 12737 QEplus033719.raw F4 840.6 595.2 793.6 819 937.5 742.5 274 1.96 1 FALSE 0.002293 0.04488 0.158 -250 51064 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSESAPVK [K].dSESAPVk.[G] N-Term(TMT6plex); K8(TMT6plex) 3 Q3UID0 SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=1 Q6PDG5-2; Q3UID0; Q6PDG5 Isoform 2 of SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2; SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=1; SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=2 0 2 2 0.4744 0 1 1 1 645.87115 1290.73503 1290.73055 3.47 0.00224 0/0 0 0 6006834 HCD 30 MS2 16.09617 471.9 110 48.0681 12744 12744 12737 QEplus033719.raw F4 491.7 444.5 479.4 324.3 664.3 427.3 438 2.93 1 FALSE 1.14E-05 6.37E-05 0.894 -250 51071 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGIPPDQQR [K].eGIPPDQQR.[LV] N-Term(TMT6plex) 18 P62984; P62983 Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2;Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2 E9Q5F6; P62984; Q922Z8; Q922B0; Q3TH47; Q5SX22; E9Q4P0; P62983; Q78XY9; E9Q9J0; Q8R0Z9; B0LAC2; Q8C2K3; Q8VC46; A5JUZ1; A0A0A6YW67; E9QNP0; P0CG50 Polyubiquitin-C (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=1; Ubiquitin-60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Uba52 PE=1 SV=2; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Polyubiquitin-B (Fragment) OS=Mus musculus OX=10090 GN=Ubb PE=4 SV=2; KxDL motif-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Ubiquitin-40S ribosomal protein S27a OS=Mus musculus OX=10090 GN=Rps27a PE=1 SV=2; Ubiquitin B OS=Mus musculus OX=10090 GN=Ubb PE=2 SV=1; 60S ribosomal protein L40 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=3 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiquitin A-52 residue ribosomal protein fusion product 1 (Fragment) OS=Mus musculus OX=10090 GN=Uba52 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubb-ps PE=2 SV=1; Ubc protein OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Ubiqutin subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Ubc PE=2 SV=1; Predicted pseudogene 8797 OS=Mus musculus OX=10090 GN=Gm8797 PE=4 SV=1; 60S ribosomal protein L40 OS=Mus musculus OX=10090 GN=Kxd1 PE=1 SV=1; Polyubiquitin-C OS=Mus musculus OX=10090 GN=Ubc PE=1 SV=2 0 2 2 0.6747 0 1 1 1 634.84259 1268.6779 1268.67963 -1.36 -0.00086 0/0 0 0 6005589 HCD 30 MS2 10.02477 352.6 110 48.0706 12745 12745 12737 QEplus033719.raw F4 330.1 294 367.1 297.9 392.9 433.4 244 2.92 2 FALSE 1.14E-05 0.0004731 0.727 -250 51081 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAANAMK [R].eAANAMk.[L] N-Term(TMT6plex); K7(TMT6plex) 3 Q9QUJ7 Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus OX=10090 GN=Acsl4 PE=1 SV=2 Q9QUJ7; Q9QUJ7-2; Q8BW44 Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus OX=10090 GN=Acsl4 PE=1 SV=2; Isoform Short of Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus OX=10090 GN=Acsl4; AMP-binding domain-containing protein OS=Mus musculus OX=10090 GN=Acsl4 PE=2 SV=1 0 2 2 0.4074 0 1 1 1 596.8418 1192.67632 1192.67601 0.25 0.00015 0/0 0 0 2270087 HCD 30 MS2 50.79711 407.8 110 48.0756 12747 12747 12737 QEplus033719.raw F4 628.6 228.4 393.8 275.2 395 526 313 2.7 1 FALSE 5.44E-05 0.00261 0.572 -250 51115 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RHLYDPK [R].rHLYDPk.[NLM] N-Term(TMT6plex); K7(TMT6plex) 12 Q543F3; B2RSH3; Q9DAW9 Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1;Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=2 SV=1;Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 Q922F8; Q543F3; B2RSH3; Q9DAW9; A0A1L1SRV0; A0A0G2JFI6; Q08091-2; Q99JN5; D3Z7R6; A0A1L1SUB2; A0A0G2JDV8; Q8CBQ2 Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=2 SV=1; Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=1 SV=1; Calponin-3 (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=4; Isoform Beta of Calponin-1 OS=Mus musculus OX=10090 GN=Cnn1; Cnn3 protein (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1; Calponin (Fragment) OS=Mus musculus OX=10090 GN=Cnn1 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=2 SV=1 1 3 3 0.3922 0 1 1 1 462.94638 1386.82459 1386.82579 -0.87 -0.0004 0/0 0 0 9422551 HCD 30 MS2 21.37862 671.8 106.505 48.0944 12754 12754 12748 QEplus033719.raw F4 650.5 648.9 799.8 452.7 797.6 681.1 359 3.06 3 FALSE 1.14E-05 2.17E-05 0.983 -250 51123 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVPNNQLR [K].dVPNNQLR.[H] N-Term(TMT6plex) 10 P59326; Q8BYK6 YTH domain-containing family protein 1 OS=Mus musculus OX=10090 GN=Ythdf1 PE=1 SV=1;YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3 PE=1 SV=2 Q3TH60; Q8BYK6-2; P59326; Q8BYK6-3; Q8R5D2; Q8BYK6; Q7TN20; Q3U8D6; Q8BVC6; A2AWN8 YTH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ythdf1 PE=2 SV=1; Isoform 2 of YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3; YTH domain-containing family protein 1 OS=Mus musculus OX=10090 GN=Ythdf1 PE=1 SV=1; Isoform 3 of YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3; Ythdf3 protein (Fragment) OS=Mus musculus OX=10090 GN=Ythdf3 PE=2 SV=1; YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3 PE=1 SV=2; Ythdf3 protein (Fragment) OS=Mus musculus OX=10090 GN=Ythdf3 PE=2 SV=1; YTH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ythdf1 PE=2 SV=1; YTH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ythdf3 PE=2 SV=1; YTH domain-containing family protein 1 OS=Mus musculus OX=10090 GN=Ythdf1 PE=1 SV=1 0 2 2 0.59 0 1 1 1 592.83386 1184.66045 1184.6585 1.64 0.00097 0/0 0 0 4219536.5 HCD 30 MS2 0 420.5 110 48.0969 12755 12755 12748 QEplus033719.raw F4 432.2 361.8 432.5 384.5 448.1 463.7 196 2.61 2 FALSE 0.001074 0.01383 0.348 -250 51135 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLQSEQPQTAAAR [K].qLQSEQPQTAAAR.[S] N-Term(TMT6plex) 3 Q8BVE3 V-type proton ATPase subunit H OS=Mus musculus OX=10090 GN=Atp6v1h PE=1 SV=1 Q8BVE3; A0A0A6YWP6; A0A0A6YX18 V-type proton ATPase subunit H OS=Mus musculus OX=10090 GN=Atp6v1h PE=1 SV=1; V-type proton ATPase subunit H OS=Mus musculus OX=10090 GN=Atp6v1h PE=1 SV=1; V-type proton ATPase subunit H OS=Mus musculus OX=10090 GN=Atp6v1h PE=1 SV=1 0 2 2 0.7806 0 1 1 1 828.94598 1656.88469 1656.88666 -1.19 -0.00099 0/0 0 0 2406678.75 HCD 30 MS2 17.44733 115.2 110 48.1019 12757 12757 12748 QEplus033719.raw F4 113.8 99.4 133.7 114.9 105 124.1 313 3.6 1 FALSE 1.14E-05 7.58E-10 1.83 -250 51141 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVEDEER [R].lVEDEER.[R] N-Term(TMT6plex) 2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q80U36; Q9JHU4 MKIAA0325 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 2 2 0.3619 0 1 1 1 559.79785 1118.58843 1118.58908 -0.59 -0.00033 0/0 0 0 9665027 HCD 30 MS2 35.45496 547.9 110 48.1044 12758 12758 12748 QEplus033719.raw F4 751.7 404.5 585.8 443.9 517 584.8 216 2.68 1 FALSE 5.44E-05 0.0018 0.608 -250 51146 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVGASGSFR [K].gVGASGSFR.[L] N-Term(TMT6plex) 3 Q3U4Y0 H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f0 PE=2 SV=1 Q3U4Y0; Q8C1Y3; P10922 H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f0 PE=2 SV=1; H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f0 PE=2 SV=1; Histone H1.0 OS=Mus musculus OX=10090 GN=H1-0 PE=2 SV=4 0 2 2 0.5942 0 1 1 1 533.79602 1066.58476 1066.58427 0.46 0.00025 0/0 0 0 6866707 HCD 30 MS2 20.4118 613.3 110 48.1117 12760 12760 12759 QEplus033719.raw F4 564.5 580 707.4 557.9 591.4 678.7 165 2.76 1 FALSE 1.14E-05 1.89E-05 0.995 -250 51159 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FSGTVR [R].fSGTVR.[L] N-Term(TMT6plex) 7 Q5XJF6 Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1 P53026; Q5XJF6; A0A3B2W820; A0A3B2W824; Q3U561; D6RE43; A0A3B2WBL1 60S ribosomal protein L10a OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=3; Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1; 60S ribosomal protein L10a OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1; 60S ribosomal protein L10a (Fragment) OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1; Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=2 SV=1; 60S ribosomal protein L10a OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1; Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1 0 2 2 0.2365 0 1 1 1 448.26379 895.52031 895.51988 0.48 0.00021 0/0 0 0 34999028 HCD 30 MS2 15.32242 635 39.666 48.1165 12762 12762 12759 QEplus033719.raw F4 601.1 661 729.1 487.3 673.8 657.6 46 2.03 1 FALSE 0.004271 0.07843 0.066 -250 51185 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVDFSAR [K].rVDFSAR.[T] N-Term(TMT6plex) 3 A0A0R4J0V5 DNA-directed RNA polymerase subunit OS=Mus musculus OX=10090 GN=Polr2a PE=1 SV=1 A0A0R4J0V5; P08775; O08847 DNA-directed RNA polymerase subunit OS=Mus musculus OX=10090 GN=Polr2a PE=1 SV=1; DNA-directed RNA polymerase II subunit RPB1 OS=Mus musculus OX=10090 GN=Polr2a PE=1 SV=3; DNA-directed RNA polymerase subunit OS=Mus musculus OX=10090 GN=Polr2a PE=2 SV=1 1 3 3 0.1201 0 1 1 1 360.54306 1079.61463 1079.61591 -1.19 -0.00043 0/0 0 0 4217090 HCD 30 MS2 74.74474 461.5 110 48.1237 12765 12765 12759 QEplus033719.raw F4 486.7 361 522.8 315.6 563.7 519 230 3.08 1 FALSE 0.0002814 0.005657 0.486 -250 51193 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAFQDDPR [K].eAFQDDPR.[F] N-Term(TMT6plex) 4 Q9D5V5 Cullin-5 OS=Mus musculus OX=10090 GN=Cul5 PE=1 SV=3 Q9D5V5; G3X914; E9PV12; E9Q6Z0 Cullin-5 OS=Mus musculus OX=10090 GN=Cul5 PE=1 SV=3; Cullin-5 OS=Mus musculus OX=10090 GN=Cul5 PE=1 SV=1; Cullin-5 OS=Mus musculus OX=10090 GN=Cul5 PE=1 SV=1; Cullin-5 OS=Mus musculus OX=10090 GN=Cul5 PE=1 SV=1 0 2 2 0.4402 0 1 1 1 603.8009 1206.59453 1206.59523 -0.58 -0.00035 0/0 0 0 2624309.5 HCD 30 MS2 0 313.2 110 48.1262 12766 12766 12759 QEplus033719.raw F4 362.6 247.1 321.4 255.7 354 338.1 114 2.34 1 FALSE 0.002225 0.04284 0.165 -250 51200 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVDGPSGK [K].tVDGPSGk.[L] N-Term(TMT6plex); K8(TMT6plex) 8 V9GX06; A0A0A0MQF6 Predicted gene 11214 (Fragment) OS=Mus musculus OX=10090 GN=Gm11214 PE=1 SV=1;Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 A0A1D5RLD8; V9GX06; Q8CEV2; A0A0A0MQF6; V9GXA7; P16858; S4R1W1; S4R257 Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm10358 PE=1 SV=1; Predicted gene 11214 (Fragment) OS=Mus musculus OX=10090 GN=Gm11214 PE=1 SV=1; Gp_dh_C domain-containing protein OS=Mus musculus OX=10090 GN=3000002C10Rik PE=2 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Predicted gene 15294 OS=Mus musculus OX=10090 GN=Gm15294 PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=2; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm3839 PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 0 2 2 0.4925 0 1 1 1 609.85974 1218.71221 1218.70942 2.28 0.00139 0/0 0 0 9484528 HCD 30 MS2 27.916 982.9 110 48.1288 12767 12767 12759 QEplus033719.raw F4 1465.8 582.9 909.4 866.2 615 1458 478 2.66 2 FALSE 0.001213 0.01644 0.316 -250 51209 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEAGDMMGGHAIR [K].hEAGDMMGGHAIR.[I] N-Term(TMT6plex) 4 P10605 Cathepsin B OS=Mus musculus OX=10090 GN=Ctsb PE=1 SV=2 P10605; Q6LAF6; Q3TC17; Q3TVS6 Cathepsin B OS=Mus musculus OX=10090 GN=Ctsb PE=1 SV=2; Cathepsin B (Fragment) OS=Mus musculus OX=10090 GN=Ctsb PE=2 SV=1; Cathepsin B OS=Mus musculus OX=10090 GN=Ctsb PE=2 SV=1; Cathepsin B OS=Mus musculus OX=10090 GN=Ctsb PE=2 SV=1 0 3 3 0.7919 0 1 1 1 537.59552 1610.77201 1610.7729 -0.55 -0.0003 0/0 0 0 5944171.5 HCD 30 MS2 24.8074 329.1 110 48.1312 12768 12768 12759 QEplus033719.raw F4 356.6 266.4 352.2 289 351.6 358.8 92 5.96 1 FALSE 1.14E-05 1.23E-14 2.74 -250 51213 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RALEAEK [R].rALEAEk.[RN] N-Term(TMT6plex); K7(TMT6plex) 6 Q6P5H2; Q80U72 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1;Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib PE=1 SV=2 Q80U72-4; Q80U72-2; Q6P5H2; Q80U72-3; Q6P5H2-2; Q80U72 Isoform 4 of Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib; Isoform 2 of Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib; Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 3 of Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes; Protein scribble homolog OS=Mus musculus OX=10090 GN=Scrib PE=1 SV=2 1 2 2 0.0949 0 1 1 1 637.89435 1274.78142 1274.78326 -1.44 -0.00092 0/0 0 0 5768078.5 HCD 30 MS2 49.18654 486.9 110 48.1338 12769 12769 12759 QEplus033719.raw F4 496.3 332.6 548.4 491.4 516.8 535.7 498 1.58 2 FALSE 0.001266 0.01731 0.307 -250 51222 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGSPGAEGSPGRDGAPGAK [R].eGSPGAEGSPGRDGAPGAk.[G] N-Term(TMT6plex); K19(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087; Q99LL6 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4; Col1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1 1 3 3 0.664 0 1 1 1 719.04303 2155.11454 2155.11438 0.07 0.00005 0/0 0 0 7126757 HCD 30 MS2 0 295.2 110 48.1411 12771 12771 12770 QEplus033719.raw F4 266 343.4 365.6 99.7 441.6 254.8 336 3.81 1 FALSE 1.14E-05 2.91E-08 1.529 -250 51248 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELATVR [K].eLATVR.[T] N-Term(TMT6plex) 7 Q5EBQ6 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=1 A0A0G2JFQ3; A0A140T8T4; A0A0G2JES3; D3Z629; Q5M9J5; Q5EBQ6; D3YZT0 60S ribosomal protein L9 (Fragment) OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=1; 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9-ps6 PE=3 SV=1; 60S ribosomal protein L9 (Fragment) OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=1; 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=1; 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=2 SV=1; 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=1; 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=2 0 2 2 0.1359 0 1 1 1 459.28369 917.56011 917.56175 -1.79 -0.00082 0/0 0 0 35105020 HCD 30 MS2 62.51622 667.6 16.509 48.1481 12774 12774 12770 QEplus033719.raw F4 705.2 586.5 669.7 524.5 895.1 624.6 196 2.06 1 FALSE 0.009274 0.1711 -0.109 -250 51267 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGFNSK [K].sGFNSk.[S] N-Term(TMT6plex); K6(TMT6plex) 6 Q9Z204-2; Q9Z204-3 Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc;Isoform 3 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc Q3U6P5; Q9Z204; Q9Z204-5; Q9Z204-2; Q9Z204-4; Q9Z204-3 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Hnrnpc PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc PE=1 SV=1; Isoform 5 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform 4 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform 3 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc 0 2 2 0.3743 0 1 1 1 549.32098 1097.63469 1097.63553 -0.76 -0.00042 0/0 0 0 3826045.5 HCD 30 MS2 33.68604 797.5 110 48.1579 12778 12778 12770 QEplus033719.raw F4 1311.4 576.4 811.9 614.7 505.8 964.6 139 1.79 2 FALSE 0.004072 0.07516 0.074 -250 51286 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDSATDTTAPK [K].tDSATDTTAPk.[S] N-Term(TMT6plex); K11(TMT6plex) 3 Q3UHT6 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1 Q3UHT6; P19096; A0A0U1RNJ1 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=1 0 2 2 0.7642 0 1 1 1 783.42444 1565.8416 1565.84229 -0.44 -0.00034 0/0 0 0 8077774 HCD 30 MS2 0 382.7 110 48.1703 12782 12782 12781 QEplus033719.raw F4 386.7 357.6 386.4 263 473.8 428.8 365 4.92 1 FALSE 1.14E-05 5.57E-08 1.476 -250 51297 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATVHDPETGK [R].aTVHDPETGk.[L] N-Term(TMT6plex); K10(TMT6plex) 3 Q60715-2 Isoform 2 of Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1 E9Q7B0; Q60715-2; Q3TTT2 Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=1 SV=1; Isoform 2 of Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1 0 3 3 0.7835 0 1 1 1 504.95148 1512.83988 1512.84223 -1.55 -0.00078 0/0 0 0 36057888 HCD 30 MS2 3.826455 716.9 48.022 48.1773 12785 12785 12781 QEplus033719.raw F4 743.4 522.8 719.4 744.1 841.3 730.2 347 3.88 1 FALSE 1.14E-05 6.09E-07 1.278 -250 51301 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDSATDTTAPK [K].tDSATDTTAPk.[S] N-Term(TMT6plex); K11(TMT6plex) 3 Q3UHT6 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1 Q3UHT6; P19096; A0A0U1RNJ1 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=1 0 3 3 0.6096 0 1 1 1 522.6189 1565.84214 1565.84229 -0.1 -0.00005 0/0 0 0 12263147 HCD 30 MS2 8.697689 720.2 110 48.1798 12786 12786 12781 QEplus033719.raw F4 774.6 587.1 688.7 547.3 1046 677.8 371 3.74 1 FALSE 1.14E-05 1.78E-05 1 -250 51305 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVDQQQVER [R].vVDQQQVER.[H] N-Term(TMT6plex) 3 Q61687 Transcriptional regulator ATRX OS=Mus musculus OX=10090 GN=Atrx PE=1 SV=3 Q61687; Q3TSV4; Q3UZ76 Transcriptional regulator ATRX OS=Mus musculus OX=10090 GN=Atrx PE=1 SV=3; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Atrx PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Atrx PE=2 SV=1 0 2 2 0.5745 0 1 1 1 665.37152 1329.73577 1329.73239 2.54 0.00169 0/0 0 0 4061553.25 HCD 30 MS2 0 279.3 110 48.1873 12789 12789 12781 QEplus033719.raw F4 246.3 284.2 300.1 197.3 368.4 279.5 362 3.29 1 FALSE 1.14E-05 8.58E-07 1.25 -250 51312 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPDTIEQCR [K].nPDTIEQcR.[R] N-Term(TMT6plex); C8(Carbamidomethyl) 4 F6UIS1 Endoplasmic reticulum-Golgi intermediate compartment protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Ergic3 PE=1 SV=8 F6UIS1; Q9CQE7-2; F6RK81; Q9CQE7 Endoplasmic reticulum-Golgi intermediate compartment protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Ergic3 PE=1 SV=8; Isoform 2 of Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Mus musculus OX=10090 GN=Ergic3; Endoplasmic reticulum-Golgi intermediate compartment protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Ergic3 PE=1 SV=1; Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Mus musculus OX=10090 GN=Ergic3 PE=1 SV=1 0 2 2 0.5194 0 1 1 1 681.34131 1361.67534 1361.66808 5.33 0.00363 0/0 0 0 3118830 HCD 30 MS2 0 201.8 110 48.1898 12790 12790 12781 QEplus033719.raw F4 190.8 197.3 202.6 160.5 260.8 198.7 123 2.06 1 FALSE 1.14E-05 0.0001687 0.814 -250 51316 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQLEDGDQPDSK [K].rQLEDGDQPDSk.[K] N-Term(TMT6plex); K12(TMT6plex) 2 Q3U0V1 Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2 Q3U0V1; A0A3B2WCD8 Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2; Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=1 1 3 3 0.7449 0 1 1 1 615.99512 1845.9708 1845.97068 0.07 0.00004 0/0 0 0 18320604 HCD 30 MS2 7.424357 617.1 110 48.1923 12791 12791 12781 QEplus033719.raw F4 633 624.9 686.4 386.7 815 556.7 318 4.94 1 FALSE 1.14E-05 6.03E-11 2.039 -250 51320 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EASDRETAIK [K].eASDRETAIk.[L] N-Term(TMT6plex); K10(TMT6plex) 7 B2ZRS5 DEP domain-containing mTOR-interacting protein OS=Mus musculus OX=10090 GN=Deptor PE=1 SV=1 B2ZRS5; B2ZRS8; A0A2I3BRE1; B2ZRS6; B2ZRS3; Q570Y9-2; Q570Y9-3 DEP domain-containing mTOR-interacting protein OS=Mus musculus OX=10090 GN=Deptor PE=1 SV=1; Depdc6-003 OS=Mus musculus OX=10090 GN=Depdc6 PE=4 SV=1; DEP domain-containing mTOR-interacting protein OS=Mus musculus OX=10090 GN=Deptor PE=1 SV=1; Depdc6-002 OS=Mus musculus OX=10090 GN=Depdc6 PE=4 SV=1; Depdc6-001 OS=Mus musculus OX=10090 GN=Deptor PE=4 SV=1; Isoform 2 of DEP domain-containing mTOR-interacting protein OS=Mus musculus OX=10090 GN=Deptor; Isoform 3 of DEP domain-containing mTOR-interacting protein OS=Mus musculus OX=10090 GN=Deptor 1 3 3 0.3457 0 1 1 1 526.63513 1577.89084 1577.88991 0.59 0.00031 0/0 0 0 5291511 HCD 30 MS2 58.58874 647 110 48.1996 12793 12793 12792 QEplus033719.raw F4 900.5 476 656.3 598.6 612.8 638 421 1.88 1 FALSE 0.0003211 0.006288 0.472 -250 51333 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYDRDKDEK [K].dYDRDkDEk.[I] N-Term(TMT6plex); K6(TMT6plex); K9(TMT6plex) 1 Q05186 Reticulocalbin-1 OS=Mus musculus OX=10090 GN=Rcn1 PE=1 SV=1 Q05186 Reticulocalbin-1 OS=Mus musculus OX=10090 GN=Rcn1 PE=1 SV=1 2 4 4 0.2389 0 1 1 1 468.50885 1871.01357 1871.01137 1.18 0.00055 0/0 0 0 12846610 HCD 30 MS2 34.11131 1171.6 110 48.2046 12795 12795 12792 QEplus033719.raw F4 1393.8 1058.7 1252.9 1181.8 1171.7 970.6 363 1.8 1 FALSE 0.002049 0.0358 0.19 -250 51350 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAPGPAGPK [R].gAPGPAGPk.[G] N-Term(TMT6plex); K9(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 2 2 0.4806 0 1 1 1 605.37042 1209.73357 1209.73558 -1.66 -0.00101 0/0 0 0 3560253 HCD 30 MS2 14.65741 481.8 110 48.2096 12797 12797 12792 QEplus033719.raw F4 493.6 459.5 530.8 313.2 578.9 514.8 289 2.58 1 FALSE 3.35E-05 0.001238 0.643 -250 51358 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAGGGGVGGPGAK [K].eAGGGGVGGPGAk.[S] N-Term(TMT6plex); K13(TMT6plex) 11 A0A0N4SV32 Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1 A0A0N4SUQ1; A0A0N4SV32; Q9CY58-3; A0A0N4SUN8; Q9CY58-4; A0A0N4SWH2; Q3V274; Q3UJK2; Q9CY58; Q9CY58-2; Q3UMP4 Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Isoform 3 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Isoform 4 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; HABP4_PAI-RBP1 domain-containing protein OS=Mus musculus OX=10090 GN=Serbp1 PE=2 SV=1; HABP4_PAI-RBP1 domain-containing protein OS=Mus musculus OX=10090 GN=Serbp1 PE=2 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=2; Isoform 2 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1 0 3 3 0.7249 0 1 1 1 491.28195 1471.8313 1471.82691 2.98 0.00146 0/0 0 0 13903742 HCD 30 MS2 43.68439 876.4 107.085 48.212 12798 12798 12792 QEplus033719.raw F4 976.9 731.8 906.1 704.7 993 945.8 405 4.18 1 FALSE 1.14E-05 4.89E-11 2.056 -250 51365 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAGGGGVGGPGAK [K].eAGGGGVGGPGAk.[S] N-Term(TMT6plex); K13(TMT6plex) 11 A0A0N4SV32 Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1 A0A0N4SUQ1; A0A0N4SV32; Q9CY58-3; A0A0N4SUN8; Q9CY58-4; A0A0N4SWH2; Q3V274; Q3UJK2; Q9CY58; Q9CY58-2; Q3UMP4 Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Isoform 3 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Isoform 4 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; HABP4_PAI-RBP1 domain-containing protein OS=Mus musculus OX=10090 GN=Serbp1 PE=2 SV=1; HABP4_PAI-RBP1 domain-containing protein OS=Mus musculus OX=10090 GN=Serbp1 PE=2 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=2; Isoform 2 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1 0 2 2 0.6915 0 1 1 1 736.41852 1471.82976 1471.82691 1.93 0.00142 0/0 0 0 12185664 HCD 30 MS2 0 551.2 110 48.2146 12799 12799 12792 QEplus033719.raw F4 610.4 456.9 538 469.8 681.6 550.4 411 4.7 1 FALSE 1.14E-05 5.22E-14 2.62 -250 51371 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERDDDDEDGDGDADGATGKK [K].eRDDDDEDGDGDADGATGkk.[K] N-Term(TMT6plex); K19(TMT6plex); K20(TMT6plex) 5 O08663 Methionine aminopeptidase 2 OS=Mus musculus OX=10090 GN=Metap2 PE=1 SV=1 O08663; Q3UI33; M0QWM9; M0QW48; Q3TMN1 Methionine aminopeptidase 2 OS=Mus musculus OX=10090 GN=Metap2 PE=1 SV=1; Methionine aminopeptidase 2 OS=Mus musculus OX=10090 GN=Metap2 PE=1 SV=1; Methionine aminopeptidase 2 (Fragment) OS=Mus musculus OX=10090 GN=Metap2 PE=1 SV=1; Methionine aminopeptidase 2 (Fragment) OS=Mus musculus OX=10090 GN=Metap2 PE=1 SV=1; Methionine aminopeptidase 2 OS=Mus musculus OX=10090 GN=Metap2 PE=1 SV=1 2 4 4 0.8859 0 1 1 1 692.83051 2768.30019 2768.30616 -2.16 -0.00149 0/0 0 0 6534223 HCD 30 MS2 0 259.8 110 48.2171 12800 12800 12792 QEplus033719.raw F4 248.7 285.5 293 176.2 270.4 285.3 97 6.31 1 FALSE 1.14E-05 1.84E-15 2.896 -250 51374 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AALVDQR [R].aALVDQR.[G] N-Term(TMT6plex) 6 A2AJL4 FGGY carbohydrate kinase domain-containing protein OS=Mus musculus OX=10090 GN=Fggy PE=1 SV=1 D6RHR3; A2AJL3-2; B1AY71; A2AJL4; A2AJL3; H3BJ80 FGGY carbohydrate kinase domain-containing protein OS=Mus musculus OX=10090 GN=Fggy PE=1 SV=1; Isoform 2 of FGGY carbohydrate kinase domain-containing protein OS=Mus musculus OX=10090 GN=Fggy; FGGY carbohydrate kinase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Fggy PE=1 SV=1; FGGY carbohydrate kinase domain-containing protein OS=Mus musculus OX=10090 GN=Fggy PE=1 SV=1; FGGY carbohydrate kinase domain-containing protein OS=Mus musculus OX=10090 GN=Fggy PE=1 SV=1; FGGY carbohydrate kinase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Fggy PE=1 SV=1 0 2 2 0.0663 0 1 1 1 501.29837 1001.58946 1001.59411 -4.64 -0.00232 0/0 0 0 8297371 HCD 30 MS2 46.81363 898.7 110 48.2196 12801 12801 12792 QEplus033719.raw F4 885.1 613.3 984.6 920.9 828.7 1159.8 268 1.66 1 FALSE 0.004449 0.07988 0.062 -250 51391 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DREEALHQFR [RK].dREEALHQFR.[S] N-Term(TMT6plex) 6 B9EKE9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1 B9EKE9; B7ZWF1; Q62095; Q3TQX5; P16381; Q3U484 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; ATP-dependent RNA helicase DDX3Y OS=Mus musculus OX=10090 GN=Ddx3y PE=1 SV=2; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=1; Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus OX=10090 GN=D1Pas1 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3y PE=2 SV=1 1 4 4 0.5928 0 1 1 1 383.20612 1529.80263 1529.8022 0.28 0.00011 0/0 0 0 21440082 HCD 30 MS2 34.23254 460.2 61.031 48.2294 12804 12804 12803 QEplus033719.raw F4 570.7 365.8 505.5 415.2 453.6 450.3 248 4.42 1 FALSE 1.14E-05 9.30E-06 1.053 -250 51404 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALHLQER [R].aLHLQER.[L] N-Term(TMT6plex) 1 P27641 X-ray repair cross-complementing protein 5 OS=Mus musculus OX=10090 GN=Xrcc5 PE=1 SV=4 P27641 X-ray repair cross-complementing protein 5 OS=Mus musculus OX=10090 GN=Xrcc5 PE=1 SV=4 0 3 3 0.3074 0 1 1 1 365.8873 1095.64734 1095.64721 0.12 0.00004 0/0 0 0 24407480 HCD 30 MS2 12.65976 272.8 51.758 48.2341 12806 12806 12803 QEplus033719.raw F4 298.3 182.5 263.6 314.1 233.9 344.3 91 3.09 1 FALSE 0.001266 0.01719 0.308 -250 51430 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CYECGEK [R].cYEcGEk.[G] N-Term(TMT6plex); C1(Carbamidomethyl); C4(Carbamidomethyl); K7(TMT6plex) 8 Q8BL97 Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1 Q8BL97; A0A3Q4L393; Q8BL97-4; A0A3Q4L335; A0A3Q4EGP0; Q8BL97-3; A0A3Q4EH04; Q3THA6 Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Serine/arginine-rich-splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Isoform 4 of Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7; Serine/arginine-rich-splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Serine/arginine-rich-splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Isoform 3 of Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7; Serine/arginine-rich-splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Srsf7 PE=2 SV=1 0 2 2 0.6548 0 1 1 1 702.33948 1403.67168 1403.66994 1.24 0.00087 0/0 0 0 5943623 HCD 30 MS2 0 388.5 110 48.2416 12809 12809 12803 QEplus033719.raw F4 404.5 389.9 382.6 315.6 495.8 342.4 63 2.81 1 FALSE 0.0008805 0.0122 0.37 -250 51453 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGGGGTGSGAEPVPGASNR [K].kGGGGTGSGAEPVPGASNR.[S] N-Term(TMT6plex); K1(TMT6plex) 2 Q3V299 Protein unc-119 homolog A OS=Mus musculus OX=10090 GN=Unc119 PE=1 SV=1 Q3V299; B1AQD9 Protein unc-119 homolog A OS=Mus musculus OX=10090 GN=Unc119 PE=1 SV=1; Protein unc-119 homolog A OS=Mus musculus OX=10090 GN=Unc119 PE=1 SV=1 1 3 3 0.8393 0 1 1 1 705.38324 2114.13517 2114.13545 -0.13 -0.00009 0/0 0 0 3341132.25 HCD 30 MS2 0 92.6 110 48.2516 12813 12813 12803 QEplus033719.raw F4 94.8 91.4 98 63.9 117.6 90 413 5.6 1 FALSE 1.14E-05 6.31E-16 3.776 -250 51496 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DREEALHQFR [RK].dREEALHQFR.[S] N-Term(TMT6plex) 6 B9EKE9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1 B9EKE9; B7ZWF1; Q62095; Q3TQX5; P16381; Q3U484 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; ATP-dependent RNA helicase DDX3Y OS=Mus musculus OX=10090 GN=Ddx3y PE=1 SV=2; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=1; Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus OX=10090 GN=D1Pas1 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3y PE=2 SV=1 1 3 3 0.6507 0 1 1 1 510.60535 1529.80149 1529.8022 -0.47 -0.00024 0/0 0 0 12036461 HCD 30 MS2 14.39122 676.3 110 48.2735 12821 12821 12814 QEplus033719.raw F4 851.6 549.9 739.5 503.2 673 740.3 253 5.44 1 FALSE 1.14E-05 1.08E-09 1.801 -250 51501 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNACNDMGK [R].dNAcNDMGk.[M] N-Term(TMT6plex); C4(Carbamidomethyl); K9(TMT6plex) 1 O35127 Protein C10 OS=Mus musculus OX=10090 GN=Grcc10 PE=1 SV=1 O35127 Protein C10 OS=Mus musculus OX=10090 GN=Grcc10 PE=1 SV=1 0 2 2 0.5938 0 1 1 1 741.85797 1482.70867 1482.70812 0.37 0.00027 0/0 0 0 7874114.5 HCD 30 MS2 47.99039 504.8 110 48.2761 12822 12822 12814 QEplus033719.raw F4 510.8 418.9 489.9 333.3 681.3 594.9 85 2.88 1 FALSE 1.14E-05 1.50E-05 1.014 -250 51507 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLVEESR [K].kLVEESR.[E] N-Term(TMT6plex); K1(TMT6plex) 7 Q01730 Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=3 Q01730; A2AUR7; Q3TFN7; Q9D031; E0CXG5; A0A0A6YWZ2; B1AYQ0 Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=3; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsu1 PE=2 SV=1; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1; Ras suppressor protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1 1 2 2 0.3897 0 1 1 1 659.9101 1318.81291 1318.80947 2.61 0.00172 0/0 0 0 6241737.5 HCD 30 MS2 37.69444 493.5 110 48.2786 12823 12823 12814 QEplus033719.raw F4 506.9 383.8 524.6 430 573.2 542.8 351 1.95 1 FALSE 0.005221 0.08927 0.036 -250 51516 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGSREPVEDPQSGSSGK [R].aGSREPVEDPQSGSSGk.[Q] N-Term(TMT6plex); K17(TMT6plex) 2 Q3UZ39 Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=2 Q3UZ39-3; Q3UZ39 Isoform 3 of Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1; Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=2 1 3 3 0.7212 0 1 1 1 716.04315 2146.1149 2146.11405 0.4 0.00029 0/0 0 0 3024397.75 HCD 30 MS2 0 209.3 110 48.2811 12824 12824 12814 QEplus033719.raw F4 228.1 236 212.1 112.3 309.9 157.4 308 3.73 1 FALSE 1.14E-05 1.81E-14 2.708 -250 51523 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RCQYVTEK [K].rcQYVTEk.[V] N-Term(TMT6plex); C2(Carbamidomethyl); K8(TMT6plex) 5 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 D3YWI1; P05063; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase C OS=Mus musculus OX=10090 GN=Aldoc PE=1 SV=4; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 1 3 3 0.4316 0 1 1 1 514.62201 1541.85147 1541.85102 0.3 0.00015 0/0 0 0 22908668 HCD 30 MS2 38.5136 562.4 45.124 48.2884 12826 12826 12825 QEplus033719.raw F4 520.9 378.1 627.4 666.5 441.6 740 384 3.73 1 FALSE 1.14E-05 9.47E-06 1.052 -250 51528 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGQFTLR [K].hGQFTLR.[D] N-Term(TMT6plex) 4 P14576 Signal recognition particle 54 kDa protein OS=Mus musculus OX=10090 GN=Srp54 PE=1 SV=2 Q8C1Y6; E9PXC0; P14576; Q99JZ9 Signal recognition particle 54 kDa protein OS=Mus musculus OX=10090 GN=Srp54c PE=2 SV=1; Signal recognition particle 54 kDa protein OS=Mus musculus OX=10090 GN=Srp54c PE=1 SV=1; Signal recognition particle 54 kDa protein OS=Mus musculus OX=10090 GN=Srp54 PE=1 SV=2; Signal recognition particle 54 kDa protein OS=Mus musculus OX=10090 GN=Srp54c PE=2 SV=1 0 3 3 0.435 0 1 1 1 363.21191 1087.62119 1087.62099 0.18 0.00007 0/0 0 0 23335964 HCD 30 MS2 16.94297 312.9 59.217 48.2906 12827 12827 12825 QEplus033719.raw F4 350.4 249.9 334.1 242.2 346.5 354.6 333 3.54 1 FALSE 6.52E-05 0.002716 0.568 -250 51531 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTGEWSK [K].hTGEWSk.[T] N-Term(TMT6plex); K7(TMT6plex) 10 Q3TW25; Q7TT32 "Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1;Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BJU6; Q8BKY2; Q3TW25; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8BMR6; Q8K173; Q3TVI5 "Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 3 3 0.6567 0 1 1 1 434.91196 1302.72132 1302.72066 0.51 0.00022 0/0 0 0 44880232 HCD 30 MS2 34.87358 541.3 25.443 48.2929 12828 12828 12825 QEplus033719.raw F4 518 434.7 499.8 772.1 542.2 480.7 310 3.67 2 FALSE 2.26E-05 0.001085 0.655 -250 51537 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLVEESR [K].kLVEESR.[E] N-Term(TMT6plex); K1(TMT6plex) 7 Q01730 Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=3 Q01730; A2AUR7; Q3TFN7; Q9D031; E0CXG5; A0A0A6YWZ2; B1AYQ0 Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=3; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsu1 PE=2 SV=1; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1; Ras suppressor protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1 1 3 3 0.3899 0 1 1 1 440.27527 1318.81125 1318.80947 1.35 0.00059 0/0 0 0 35275720 HCD 30 MS2 41.8345 712.7 29.668 48.2952 12829 12829 12825 QEplus033719.raw F4 796 583.6 703.8 580.5 928.2 683.9 394 2.18 1 FALSE 0.001591 0.02493 0.245 -250 51551 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETNEPVK [R].eTNEPVk.[T] N-Term(TMT6plex); K7(TMT6plex) 2 P23475 X-ray repair cross-complementing protein 6 OS=Mus musculus OX=10090 GN=Xrcc6 PE=1 SV=5 A0A0R4J187; P23475 ATP-dependent DNA helicase 2 subunit 1 OS=Mus musculus OX=10090 GN=Xrcc6 PE=1 SV=1; X-ray repair cross-complementing protein 6 OS=Mus musculus OX=10090 GN=Xrcc6 PE=1 SV=5 0 2 2 0.1563 0 1 1 1 637.87085 1274.73442 1274.73564 -0.95 -0.00061 0/0 0 0 3748856.75 HCD 30 MS2 14.19785 321.3 110 48.2999 12831 12831 12825 QEplus033719.raw F4 333.8 237.6 350.9 299.8 370.3 335.2 378 2.24 1 FALSE 0.004939 0.08617 0.045 -250 51565 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGGSLPPQAR [K].eGGSLPPQAR.[S] N-Term(TMT6plex) 3 E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.4153 0 1 1 1 620.84601 1240.68474 1240.68472 0.02 0.00001 0/0 0 0 3111305 HCD 30 MS2 19.49485 342.2 110 48.3049 12833 12833 12825 QEplus033719.raw F4 364.5 284.9 389.6 296.4 331.9 385.9 260 2.48 1 FALSE 1.14E-05 0.000371 0.748 -250 51575 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DADSQNPDAPEGK [K].dADSQNPDAPEGk.[R] N-Term(TMT6plex); K13(TMT6plex) 4 Q8CIE6 Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2 Q63ZW9; Q8CIE6; F8WHL2; Q8BTF0 Copa protein (Fragment) OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1 0 3 3 0.7478 0 1 1 1 601.30493 1801.90024 1801.89684 1.89 0.00113 0/0 0 0 11004330 HCD 30 MS2 46.31289 714.9 110 48.31 12835 12835 12825 QEplus033719.raw F4 795 596.9 766.4 557.1 841 733.2 180 4.56 1 FALSE 1.14E-05 5.21E-08 1.481 -250 51580 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRGEVASDAK [K].vRGEVASDAk.[RS] N-Term(TMT6plex); K10(TMT6plex) 2 P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 A0A2R8VHJ0; P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=1; Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 1 3 3 0.6877 0 1 1 1 497.29739 1489.87763 1489.87386 2.53 0.00126 0/0 0 0 3334470912 HCD 30 MS2 4.487906 705.5 0.575 48.3173 12837 12837 12836 QEplus033719.raw F4 716.5 574.8 703.8 647.9 919.8 669.9 412 4.13 1 FALSE 1.14E-05 6.39E-08 1.464 -250 51589 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TCVADESHAGCEK [K].tcVADESHAGcEk.[S] N-Term(TMT6plex); C2(Carbamidomethyl); C11(Carbamidomethyl); K13(TMT6plex) 1 P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor 0 3 3 0.8039 0 1 1 1 641.31018 1921.91599 1921.91482 0.61 0.00039 0/0 0 0 11197842 HCD 30 MS2 0 596.9 110 48.3223 12839 12839 12836 QEplus033719.raw F4 674.9 110.5 185.5 85.7 2412 112.7 106 5.71 1 TRUE 1.14E-05 6.31E-16 3.259 -250 51596 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQEMTEVR [K].eQEMTEVR.[D] N-Term(TMT6plex) 3 A0A0R4J0Q5 Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1 Q3V159; A0A0R4J0Q5; P21619 Uncharacterized protein OS=Mus musculus OX=10090 GN=Lmnb2 PE=2 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=2 0 2 2 0.4344 0 1 1 1 625.81653 1250.62578 1250.62482 0.77 0.00048 0/0 0 0 12508360 HCD 30 MS2 33.98751 978.6 110 48.3248 12840 12840 12836 QEplus033719.raw F4 1115.1 658.2 996.6 886.8 1142.8 1071.8 170 2.44 1 FALSE 0.0009729 0.01309 0.358 -250 51603 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETSETSVSK [K].eTSETSVSk.[V] N-Term(TMT6plex); K9(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 2 2 0.571 0 1 1 1 713.39618 1425.78508 1425.78371 0.96 0.00069 0/0 0 0 7514910.5 HCD 30 MS2 40.25722 556.7 110 48.3298 12842 12842 12836 QEplus033719.raw F4 704.4 224.9 469.2 739 489.4 713 320 3.52 1 FALSE 1.14E-05 9.72E-07 1.24 -250 51610 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPEVTNPCDR [-K].qPEVTNPcDR.[K] N-Term(TMT6plex); C8(Carbamidomethyl) 3 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 Q811K6; A0A0R4J0I9; Q91ZX7 Lrp1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lrp1 PE=2 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 0 2 2 0.7352 0 1 1 1 722.85785 1444.70842 1444.70519 2.23 0.00161 0/0 0 0 5244140.5 HCD 30 MS2 0 233.9 110 48.3323 12843 12843 12836 QEplus033719.raw F4 219.3 189.9 236.2 172.1 380.9 205.3 82 2.53 1 FALSE 1.14E-05 0.0001514 0.823 -250 51620 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELEQEREDQK [K].eLEQEREDQk.[V] N-Term(TMT6plex); K10(TMT6plex) 2 Q8BGT7 Survival of motor neuron-related-splicing factor 30 OS=Mus musculus OX=10090 GN=Smndc1 PE=1 SV=1 Q3TGV3; Q8BGT7 Tudor domain-containing protein OS=Mus musculus OX=10090 GN=Smndc1 PE=2 SV=1; Survival of motor neuron-related-splicing factor 30 OS=Mus musculus OX=10090 GN=Smndc1 PE=1 SV=1 1 3 3 0.3364 0 1 1 1 587.98407 1761.93766 1761.93831 -0.37 -0.00022 0/0 0 0 16917120 HCD 30 MS2 33.42531 629.3 89.988 48.3371 12845 12845 12836 QEplus033719.raw F4 665.9 568 667.2 447.5 829.2 597.8 344 2.14 1 FALSE 0.007427 0.1205 -0.043 -250 51627 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRGEVASDAK [K].vRGEVASDAk.[RS] N-Term(TMT6plex); K10(TMT6plex) 2 P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 A0A2R8VHJ0; P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=1; Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 1 2 2 0.5821 0 1 1 1 745.44086 1489.87444 1489.87386 0.39 0.00029 0/0 0 0 285518784 HCD 30 MS2 4.84 424.6 8.152 48.3469 12848 12848 12847 QEplus033719.raw F4 426.3 348.1 434.6 405.8 536.6 396.1 462 2.8 1 FALSE 1.14E-05 1.38E-06 1.211 -250 51632 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYEEVAR [R].kYEEVAR.[K] N-Term(TMT6plex); K1(TMT6plex) 38 E9Q456; G5E8R2; G5E8R1; P58774; Q8C7C3; A2AIM4; Q58E70; P58774-2; E9Q5J9; A0A0R4J1P2; E9Q450; Q6IRU2 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 E9Q456; Q9D1R6; E9Q455; G5E8R2; E9Q453; Q91VH3; G5E8R1; Q8BSH3; A0A571BEU1; D3Z6I8; E9Q452; P58774; F8WID5; A2RRI1; Q8C7C3; A2AIM4; Q3TJ53; Q58E70; D3Z2H9; Q3SX28; P58774-2; E9Q454; Q61344; E9Q5J9; A0A0R4J1P2; E9Q448; P21107; E9Q450; Q8K0Z5; G5E8R0; D3YVR0; Q564G1; B7ZNL3; Q8BP43; Q6IRU2; E9Q7Q3; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin 3, related sequence 7 OS=Mus musculus OX=10090 GN=Tpm3-rs7 PE=3 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=3; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 3, gamma OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 1 3 3 0.5022 0 1 1 1 451.60294 1352.79425 1352.79382 0.32 0.00014 0/0 0 0 120403624 HCD 30 MS2 9.940581 614.3 11.413 48.3492 12849 12849 12847 QEplus033719.raw F4 562.3 385.4 648.7 746.8 529.9 812.4 374 2.23 12 TRUE 0.001066 0.01368 0.35 -250 51639 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVDGPSGK [K].tVDGPSGk.[L] N-Term(TMT6plex); K8(TMT6plex) 8 V9GX06; A0A0A0MQF6 Predicted gene 11214 (Fragment) OS=Mus musculus OX=10090 GN=Gm11214 PE=1 SV=1;Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 A0A1D5RLD8; V9GX06; Q8CEV2; A0A0A0MQF6; V9GXA7; P16858; S4R1W1; S4R257 Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm10358 PE=1 SV=1; Predicted gene 11214 (Fragment) OS=Mus musculus OX=10090 GN=Gm11214 PE=1 SV=1; Gp_dh_C domain-containing protein OS=Mus musculus OX=10090 GN=3000002C10Rik PE=2 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Predicted gene 15294 OS=Mus musculus OX=10090 GN=Gm15294 PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=2; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm3839 PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 0 3 3 0.484 0 1 1 1 406.90808 1218.70969 1218.70942 0.22 0.00009 0/0 0 0 38559804 HCD 30 MS2 8.443175 566.4 39.042 48.3514 12850 12850 12847 QEplus033719.raw F4 992.2 356.1 574.9 558.4 343.8 573.1 525 2.5 2 FALSE 0.001074 0.01377 0.348 -250 51654 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DADSQNPDAPEGK [K].dADSQNPDAPEGk.[R] N-Term(TMT6plex); K13(TMT6plex) 4 Q8CIE6 Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2 Q63ZW9; Q8CIE6; F8WHL2; Q8BTF0 Copa protein (Fragment) OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1 0 2 2 0.8182 0 1 1 1 901.45386 1801.90044 1801.89684 2 0.0018 0/0 0 0 5870284 HCD 30 MS2 0 285.9 110 48.3562 12852 12852 12847 QEplus033719.raw F4 273.6 237.4 308.9 211.4 381.8 302.5 183 4.84 1 FALSE 1.14E-05 1.61E-13 2.528 -250 51672 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMLQQSK [R].emLQQSk.[I] N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex) 12 P07901; Q71LX8 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4;Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q3TKB9; P07901; Q3TJU7; Q811H6; Q3TKA2; Q80YC2; E9Q3D6; Q3UIF3; A0PJ91; Q71LX8; Q3TKG0; Q8C5U3 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Heat shock protein HSP 90-beta (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 0 2 2 0.4529 0 1 1 1 669.38 1337.75273 1337.74991 2.11 0.00141 0/0 0 0 3757498.5 HCD 30 MS2 0 364.1 110 48.3612 12854 12854 12847 QEplus033719.raw F4 395.1 267.8 426 311.2 409 375.4 381 2.23 2 FALSE 0.00638 0.103 -0.002 -250 51680 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPTSTKPSSSAPR [K].kPTSTkPSSSAPR.[V] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 11 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; A0A0G2JFT4; A0A0G2JG35; A0A140T8T5; P27546-3; A0A0G2JDY5; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 4 4 0.5752 0 1 1 1 508.55923 2031.21511 2031.21655 -0.71 -0.00036 0/0 0 0 26012228 HCD 30 MS2 5.434376 1089.7 79.75 48.366 12856 12856 12847 QEplus033719.raw F4 1188.3 798.1 1019.5 1074.3 1460.7 997.1 362 3.06 2 FALSE 1.14E-05 3.72E-06 1.129 -250 51695 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESQTQDNITVR [K].eSQTQDNITVR.[W] N-Term(TMT6plex) 2 Q9EPU0 Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 PE=1 SV=2 Q9EPU0; Q9EPU0-2 Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 PE=1 SV=2; Isoform 2 of Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 0 2 2 0.6096 0 1 1 1 760.39948 1519.79167 1519.79137 0.2 0.00015 0/0 0 0 15253985 HCD 30 MS2 0 289.6 110 48.3783 12860 12860 12858 QEplus033719.raw F4 302 247 314.1 228.6 319.8 326.2 251 3.97 1 FALSE 1.14E-05 5.18E-10 1.861 -250 51711 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERPDVETQK [R].eRPDVETQk.[T] N-Term(TMT6plex); K9(TMT6plex) 7 Q3TEX8 Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp4 PE=2 SV=1 Q6NXV6; Q3TEX8; Q5DTK8; A0A0A6YW28; P35123; Q921M8; A0A0A6YVY7 Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Mus musculus OX=10090 GN=Usp4 PE=2 SV=1; Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp4 PE=2 SV=1; Ubiquitinyl hydrolase 1 (Fragment) OS=Mus musculus OX=10090 GN=Usp4 PE=2 SV=1; Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp4 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase 4 OS=Mus musculus OX=10090 GN=Usp4 PE=1 SV=3; Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp4 PE=2 SV=1; Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Usp4 PE=1 SV=1 0 3 3 0.6247 0 1 1 1 520.63123 1559.87912 1559.87934 -0.14 -0.00007 0/0 0 0 23177746 HCD 30 MS2 11.44978 1062.1 110 48.3831 12862 12862 12858 QEplus033719.raw F4 1124.1 880 1206.6 848.8 1158.3 1154.8 431 3.65 1 FALSE 1.14E-05 4.32E-05 0.927 -250 51730 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETSETSVSK [K].eTSETSVSk.[V] N-Term(TMT6plex); K9(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 3 3 0.5689 0 1 1 1 475.93323 1425.78513 1425.78371 1 0.00047 0/0 0 0 9729028 HCD 30 MS2 18.91672 787.1 110 48.3903 12865 12865 12858 QEplus033719.raw F4 1090 438.7 770.3 843.6 517.1 1062.8 332 2.83 1 FALSE 5.44E-05 0.001738 0.612 -250 51758 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLHQACTDEEK [R].tLHQAcTDEEk.[A] N-Term(TMT6plex); C6(Carbamidomethyl); K11(TMT6plex) 2 B9EJR8 Dynein axonemal assembly factor 5 OS=Mus musculus OX=10090 GN=Dnaaf5 PE=1 SV=1 B9EJR8; B2RY24 "Dynein axonemal assembly factor 5 OS=Mus musculus OX=10090 GN=Dnaaf5 PE=1 SV=1; Dynein assembly factor 5, axonemal OS=Mus musculus OX=10090 GN=Dnaaf5 PE=1 SV=1" 0 3 3 0.7407 0 1 1 1 597.31134 1789.91947 1789.91547 2.23 0.00133 0/0 0 0 5325304 HCD 30 MS2 0 252.4 110 48.4074 12871 12871 12869 QEplus033719.raw F4 279.3 204.2 274 182.4 312 262.5 279 5.13 1 FALSE 1.14E-05 8.79E-09 1.628 -250 51776 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAIVER [R].kAIVER.[A] N-Term(TMT6plex); K1(TMT6plex) 3 P62911 60S ribosomal protein L32 OS=Mus musculus OX=10090 GN=Rpl32 PE=1 SV=2 P17932; Q5PR09; P62911 Putative 60S ribosomal protein L32' OS=Mus musculus OX=10090 GN=Rpl32-ps PE=5 SV=2; Ribosomal protein L32 OS=Mus musculus OX=10090 GN=Rpl32 PE=2 SV=1; 60S ribosomal protein L32 OS=Mus musculus OX=10090 GN=Rpl32 PE=1 SV=2 1 3 3 0.1006 0 1 1 1 391.92859 1173.77121 1173.77196 -0.64 -0.00025 0/0 0 0 6832674.5 HCD 30 MS2 26.7193 589.4 110 48.4145 12874 12874 12869 QEplus033719.raw F4 517.3 613.2 734.7 554.8 597.8 518.5 446 1.79 1 FALSE 0.005644 0.09496 0.02 -250 51786 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RINQTYQQQYGR [R].rINQTYQQQYGR.[S] N-Term(TMT6plex) 8 Q7TMN7 Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1 Q7TMN7; S4R1F2; Q9R0V2; D3Z0S1; A0A0N4SV57; P97429; A0A0N4SW89; Q8BSL2 Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin A4 OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=4; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1 1 3 3 0.6922 0 1 1 1 595.31702 1783.9365 1783.9401 -2.02 -0.0012 0/0 0 0 4220655 HCD 30 MS2 0 269.9 110 48.417 12875 12875 12869 QEplus033719.raw F4 292.4 236 317.4 210.3 290.5 272.9 318 6.4 1 FALSE 1.14E-05 1.39E-12 2.35 -250 51794 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYNAEDNEK [K].aYNAEDNEk.[F] N-Term(TMT6plex); K9(TMT6plex) 6 Q8BHG2 CXXC motif containing zinc binding protein OS=Mus musculus OX=10090 GN=Czib PE=1 SV=1 Q8BHG2-2; Q8BHG2; Q8BHG2-3; A2A8E2; B7ZC72; B7ZC71 Isoform 2 of CXXC motif containing zinc binding protein OS=Mus musculus OX=10090 GN=Czib; CXXC motif containing zinc binding protein OS=Mus musculus OX=10090 GN=Czib PE=1 SV=1; Isoform 3 of CXXC motif containing zinc binding protein OS=Mus musculus OX=10090 GN=Czib; CXXC motif containing zinc binding protein OS=Mus musculus OX=10090 GN=Czib PE=1 SV=1; CXXC motif containing zinc binding protein OS=Mus musculus OX=10090 GN=Czib PE=1 SV=1; CXXC motif containing zinc binding protein OS=Mus musculus OX=10090 GN=Czib PE=1 SV=1 0 2 2 0.6477 0 1 1 1 756.39093 1511.77458 1511.77421 0.25 0.00019 0/0 0 0 5298999 HCD 30 MS2 21.14122 387.5 110 48.4195 12876 12876 12869 QEplus033719.raw F4 381.4 351.1 406.2 333.3 470.3 382.6 200 3.86 1 FALSE 1.14E-05 1.16E-06 1.225 -250 51800 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGMSPEQSK [K].sGMSPEQSk.[T] N-Term(TMT6plex); K9(TMT6plex) 3 Q8BTI8 Serine/arginine repetitive matrix protein 2 OS=Mus musculus OX=10090 GN=Srrm2 PE=1 SV=3 Q8BTI8; Q8BTI8-2; Q8BTI8-3 Serine/arginine repetitive matrix protein 2 OS=Mus musculus OX=10090 GN=Srrm2 PE=1 SV=3; Isoform 2 of Serine/arginine repetitive matrix protein 2 OS=Mus musculus OX=10090 GN=Srrm2; Isoform 3 of Serine/arginine repetitive matrix protein 2 OS=Mus musculus OX=10090 GN=Srrm2 0 2 2 0.6131 0 1 1 1 704.88019 1408.7531 1408.75064 1.75 0.00123 0/0 0 0 2546773 HCD 30 MS2 0 265.7 110 48.422 12877 12877 12869 QEplus033719.raw F4 263.3 227.1 265.6 212 373.7 252.7 292 3.36 1 FALSE 1.14E-05 0.0001005 0.857 -250 51815 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEAAEER [K].kLEAAEER.[R] N-Term(TMT6plex); K1(TMT6plex) 14 Q91XT3; P55821 Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1;Stathmin-2 OS=Mus musculus OX=10090 GN=Stmn2 PE=1 SV=1 D3Z4C2; Q9CZ46; Q9CXQ8; Q91XT3; P63042; Q9DCP3; D3Z5N2; Q9CYU5; Q8C2H3; Q05DI3; D3Z1Z8; P54227; P55821; G3X9Z6 Stathmin-4 OS=Mus musculus OX=10090 GN=Stmn4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stmn2 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin-4 OS=Mus musculus OX=10090 GN=Stmn4 PE=1 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn4 PE=1 SV=1; Stathmin (Fragment) OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=2; Stathmin-2 OS=Mus musculus OX=10090 GN=Stmn2 PE=1 SV=1; Stathmin-4 OS=Mus musculus OX=10090 GN=Stmn4 PE=1 SV=1 1 2 2 0.3441 0 1 1 1 702.4176 1403.82793 1403.82585 1.48 0.00104 0/0 0 0 9739993 HCD 30 MS2 47.58652 736.2 110 48.427 12879 12879 12869 QEplus033719.raw F4 769 758.4 687.3 506.5 1106.4 589.3 555 2.47 2 FALSE 1.14E-05 0.0003376 0.755 -250 51823 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETPGSQPSEPCSGVSR [K].eTPGSQPSEPcSGVSR.[Q] N-Term(TMT6plex); C11(Carbamidomethyl) 3 P27546 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 P27546; P27546-2; P27546-3 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 0 2 2 0.8456 0 1 1 1 952.45416 1903.90105 1903.90172 -0.35 -0.00034 0/0 0 0 7043426 HCD 30 MS2 0 162.3 110 48.4344 12881 12881 12880 QEplus033719.raw F4 162.8 155.9 179.2 101.5 240.9 133.6 73 4.34 1 FALSE 1.14E-05 5.46E-12 2.237 -250 51826 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSSSSFR [K].vSSSSFR.[Q] N-Term(TMT6plex) 1 Q9DBL7 Bifunctional coenzyme A synthase OS=Mus musculus OX=10090 GN=Coasy PE=1 SV=2 Q9DBL7 Bifunctional coenzyme A synthase OS=Mus musculus OX=10090 GN=Coasy PE=1 SV=2 0 2 2 0.594 0 1 1 1 499.77646 998.54564 998.54683 -1.19 -0.00059 0/0 0 0 6468587 HCD 30 MS2 19.64366 590.9 110 48.4369 12882 12882 12880 QEplus033719.raw F4 583.2 483.1 647.2 522.1 645.4 664.3 46 2.34 1 FALSE 0.001576 0.02401 0.251 -250 51833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEAAEER [K].kLEAAEER.[R] N-Term(TMT6plex); K1(TMT6plex) 14 Q91XT3; P55821 Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1;Stathmin-2 OS=Mus musculus OX=10090 GN=Stmn2 PE=1 SV=1 D3Z4C2; Q9CZ46; Q9CXQ8; Q91XT3; P63042; Q9DCP3; D3Z5N2; Q9CYU5; Q8C2H3; Q05DI3; D3Z1Z8; P54227; P55821; G3X9Z6 Stathmin-4 OS=Mus musculus OX=10090 GN=Stmn4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stmn2 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin-4 OS=Mus musculus OX=10090 GN=Stmn4 PE=1 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn4 PE=1 SV=1; Stathmin (Fragment) OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=2; Stathmin-2 OS=Mus musculus OX=10090 GN=Stmn2 PE=1 SV=1; Stathmin-4 OS=Mus musculus OX=10090 GN=Stmn4 PE=1 SV=1 1 3 3 0.3985 0 1 1 1 468.6138 1403.82685 1403.82585 0.71 0.00033 0/0 0 0 70534816 HCD 30 MS2 32.81911 971.5 21.417 48.4391 12883 12883 12880 QEplus033719.raw F4 1048.3 1031 838.4 584 1669.8 657.7 507 2.71 2 FALSE 1.14E-05 0.0007313 0.69 -250 51841 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTEGGEPYR [K].vTEGGEPYR.[L] N-Term(TMT6plex) 4 A1A4T2 Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1 Q8BHN3-3; A1A4T2; Q3UE86; Q8BHN3 Isoform 3 of Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab; Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Gal_mutarotas_2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab PE=1 SV=1 0 2 2 0.6787 0 1 1 1 618.82501 1236.64275 1236.64218 0.46 0.00028 0/0 0 0 17172444 HCD 30 MS2 32.29538 1052.5 110 48.4417 12884 12884 12880 QEplus033719.raw F4 1131.7 870.4 1132.5 991.8 1144.9 1043.9 221 2.77 1 FALSE 1.14E-05 0.0008555 0.676 -250 51857 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TCVADESHAGCEK [K].tcVADESHAGcEk.[S] N-Term(TMT6plex); C2(Carbamidomethyl); C11(Carbamidomethyl); K13(TMT6plex) 1 P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor 0 2 2 0.7735 0 1 1 1 961.46271 1921.91814 1921.91482 1.73 0.00166 0/0 0 0 4989926.5 HCD 30 MS2 0 112.4 110 48.4467 12886 12886 12880 QEplus033719.raw F4 103.5 12.1 25.2 6.4 513.2 14.2 111 4.99 1 TRUE 1.14E-05 2.05E-13 2.508 -250 51863 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETPGSQPSEPCSGVSR [K].eTPGSQPSEPcSGVSR.[Q] N-Term(TMT6plex); C11(Carbamidomethyl) 3 P27546 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 P27546; P27546-2; P27546-3 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 0 3 3 0.8168 0 1 1 1 635.30615 1903.9039 1903.90172 1.15 0.00073 0/0 0 0 11752490 HCD 30 MS2 32.00574 273.8 110 48.4492 12887 12887 12880 QEplus033719.raw F4 288.5 245.2 280.9 211.5 323.2 293.8 75 4.75 1 FALSE 1.14E-05 1.46E-06 1.206 -250 51867 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSLSGRPLK [K].hSLSGRPLk.[V] N-Term(TMT6plex); K9(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; A0A3Q4EH91; Q9D0E1-2; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 4 4 0.3445 0 1 1 1 363.98187 1452.90566 1452.9051 0.38 0.00014 0/0 0 0 9478477 HCD 30 MS2 36.62624 508.9 110 48.4517 12888 12888 12880 QEplus033719.raw F4 626 516.1 540.9 379.3 615.2 376 204 3.28 1 FALSE 2.26E-05 0.001068 0.656 -250 51872 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDVDNASLAR [R].qDVDNASLAR.[L] N-Term(TMT6plex) 8 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.5627 0 1 1 1 659.35272 1317.69817 1317.69601 1.64 0.00108 0/0 0 0 5488576.5 HCD 30 MS2 31.20378 599.5 110 48.4542 12889 12889 12880 QEplus033719.raw F4 596.9 556.2 638.2 444.6 751.8 609.2 262 3.59 2 FALSE 1.14E-05 3.42E-08 1.516 -250 51880 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPEVTNPCDR [-K].qPEVTNPcDR.[K] N-Term(TMT6plex); C8(Carbamidomethyl) 3 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 Q811K6; A0A0R4J0I9; Q91ZX7 Lrp1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lrp1 PE=2 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 0 2 2 0.7342 0 1 1 1 722.8537 1444.70012 1444.70519 -3.51 -0.00254 0/0 0 0 4627793 HCD 30 MS2 15.0553 518.2 110 48.4567 12890 12890 12880 QEplus033719.raw F4 520.6 252.8 357.6 281.9 1399.9 296.5 78 2.37 1 FALSE 1.14E-05 0.0009378 0.668 -250 51885 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAAEGFK [KR].rAAEGFk.[G] N-Term(TMT6plex); K7(TMT6plex) 13 P09103 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2 P09103; Q3URP6; Q3TWE3; Q3U738; Q3TT76; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; Q3UA23; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 1 3 3 0.4229 0 1 1 1 412.92053 1236.74704 1236.74648 0.46 0.00019 0/0 0 0 53925208 HCD 30 MS2 19.67264 538.7 19.855 48.464 12892 12892 12891 QEplus033719.raw F4 525.7 391.3 560.5 549.1 715.3 490.3 274 2.79 1 FALSE 0.0002419 0.004992 0.501 -250 51910 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRGGEDEAVCAR [R].lRGGEDEAVcAR.[S] N-Term(TMT6plex); C10(Carbamidomethyl) 3 B2RWW1 Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=2 SV=1 B2RWW1; A0A1D5RLY6; Q8C052 Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=2 SV=1; Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=1 SV=1; Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=1 SV=2 1 3 3 0.6058 0 1 1 1 521.2702 1561.79605 1561.79541 0.42 0.00022 0/0 0 0 11382011 HCD 30 MS2 58.21869 906.6 88.612 48.4711 12895 12895 12891 QEplus033719.raw F4 890.9 745.6 1013.5 778.8 942 1068.6 222 4.16 1 FALSE 1.14E-05 1.37E-05 1.022 -250 51915 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPPTAAGRPVDASPR [K].qPPTAAGRPVDASPR.[V] N-Term(TMT6plex) 2 Q8R1Q8 Cytoplasmic dynein 1 light intermediate chain 1 OS=Mus musculus OX=10090 GN=Dync1li1 PE=1 SV=1 Q3TVT4; Q8R1Q8 Dynein light intermediate chain (Fragment) OS=Mus musculus OX=10090 GN=Dync1li1 PE=2 SV=1; Cytoplasmic dynein 1 light intermediate chain 1 OS=Mus musculus OX=10090 GN=Dync1li1 PE=1 SV=1 0 3 3 0.5703 0 1 1 1 583.65967 1748.96445 1748.9605 2.26 0.00132 0/0 0 0 2811222.75 HCD 30 MS2 32.1918 303.9 110 48.4736 12896 12896 12891 QEplus033719.raw F4 352.4 234.2 324.9 242.9 324 345.2 417 3.7 1 FALSE 0.0001504 0.003409 0.545 -250 51929 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEQEYMEVR [K].hEQEYMEVR.[E] N-Term(TMT6plex) 6 F6V6T4 Transmembrane emp24 domain-containing protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Tmed2 PE=1 SV=1 F6V6T4; Q8C1Z9; Q8BPI2; Q3THL1; Q9R0Q3; Q3U9H7 Transmembrane emp24 domain-containing protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Tmed2 PE=1 SV=1; GOLD domain-containing protein OS=Mus musculus OX=10090 GN=Tmed2 PE=2 SV=1; Transmembrane emp24 domain-containing protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Tmed2 PE=1 SV=1; GOLD domain-containing protein OS=Mus musculus OX=10090 GN=Tmed2 PE=2 SV=1; Transmembrane emp24 domain-containing protein 2 OS=Mus musculus OX=10090 GN=Tmed2 PE=1 SV=1; GOLD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tmed2 PE=2 SV=1 0 3 3 0.7454 0 1 1 1 483.9054 1449.70163 1449.69938 1.55 0.00075 0/0 0 0 8867139 HCD 30 MS2 43.9002 659.1 110 48.4783 12898 12898 12891 QEplus033719.raw F4 590 603.8 743.9 537.7 712.1 766.9 85 3.81 1 FALSE 1.14E-05 1.37E-05 1.022 -250 51945 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEEGVKYER [R].eEEGVkYER.[T] N-Term(TMT6plex); K6(TMT6plex) 6 B2ZRS5 DEP domain-containing mTOR-interacting protein OS=Mus musculus OX=10090 GN=Deptor PE=1 SV=1 B2ZRS5; B2ZRS8; B2ZRS6; B2ZRS3; Q570Y9-2; Q570Y9-3 DEP domain-containing mTOR-interacting protein OS=Mus musculus OX=10090 GN=Deptor PE=1 SV=1; Depdc6-003 OS=Mus musculus OX=10090 GN=Depdc6 PE=4 SV=1; Depdc6-002 OS=Mus musculus OX=10090 GN=Depdc6 PE=4 SV=1; Depdc6-001 OS=Mus musculus OX=10090 GN=Deptor PE=4 SV=1; Isoform 2 of DEP domain-containing mTOR-interacting protein OS=Mus musculus OX=10090 GN=Deptor; Isoform 3 of DEP domain-containing mTOR-interacting protein OS=Mus musculus OX=10090 GN=Deptor 1 3 3 0.1036 0 1 1 1 532.96161 1596.87027 1596.86336 4.33 0.00231 0/0 0 0 5585119 HCD 30 MS2 52.91576 737.7 110 48.4858 12901 12901 12891 QEplus033719.raw F4 846.7 699.2 785.5 733.1 644.7 716.9 368 1.93 1 FALSE 6.52E-05 0.002684 0.57 -250 51952 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MTAMDNASK [R].mTAMDNASk.[N] N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex) 5 Q8C2Q8; A2AKU9 ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1;ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1 Q9ERA8; Q8C2Q8; Q9D9D7; Q3UD06; A2AKU9 ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=2 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=2 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1 0 2 2 0.1189 0 1 1 1 721.87323 1442.73918 1442.73836 0.57 0.00041 0/0 0 0 7039640 HCD 30 MS2 18.88491 488.3 110 48.4932 12903 12903 12902 QEplus033719.raw F4 498.4 267.9 436.9 378 955.8 392.6 170 2.27 2 FALSE 0.0009259 0.01268 0.363 -250 51961 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSSDDGDSSTMR [R].lSSDDGDSSTMR.[N] N-Term(TMT6plex) 4 Q6KCD5 Nipped-B-like protein OS=Mus musculus OX=10090 GN=Nipbl PE=1 SV=1 Q6KCD5; Q6KCD5-2; Q497G5; Q05CI1 Nipped-B-like protein OS=Mus musculus OX=10090 GN=Nipbl PE=1 SV=1; Isoform 2 of Nipped-B-like protein OS=Mus musculus OX=10090 GN=Nipbl; Nipbl protein (Fragment) OS=Mus musculus OX=10090 GN=Nipbl PE=2 SV=1; Nipbl protein (Fragment) OS=Mus musculus OX=10090 GN=Nipbl PE=2 SV=1 0 2 2 0.7542 0 1 1 1 750.34784 1499.6884 1499.68452 2.59 0.00194 0/0 0 0 2025538.25 HCD 30 MS2 0 143.8 110 48.4957 12904 12904 12902 QEplus033719.raw F4 130.7 155.2 153 99.1 195.1 129.8 36 4.19 1 FALSE 1.14E-05 1.63E-10 1.957 -250 51965 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTENAFSPSR [K].qTENAFSPSR.[S] N-Term(TMT6plex) 8 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; F6RGN9; Q3UGC3; F6ZAW1; Q8VD79; F6T2Z7; E9QA16; F6QLP8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; H-caldesmon (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 0 2 2 0.6533 0 1 1 1 683.35236 1365.69744 1365.69601 1.04 0.00071 0/0 0 0 67457992 HCD 30 MS2 10.97509 643.4 29.993 48.5002 12906 12906 12902 QEplus033719.raw F4 599.8 707.8 720.6 365.6 949.8 516.6 215 3.49 1 FALSE 1.14E-05 1.21E-05 1.032 -250 51978 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSADGAAK [K].vSADGAAk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 P18608 Non-histone chromosomal protein HMG-14 OS=Mus musculus OX=10090 GN=Hmgn1 PE=1 SV=2 Q8CEW1; A0A3B2W3M7; P18608 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hmgn1 PE=2 SV=1; Non-histone chromosomal protein HMG-14 OS=Mus musculus OX=10090 GN=Hmgn1 PE=1 SV=1; Non-histone chromosomal protein HMG-14 OS=Mus musculus OX=10090 GN=Hmgn1 PE=1 SV=2 0 2 2 0.4725 0 1 1 1 588.85321 1176.69914 1176.69886 0.24 0.00014 0/0 0 0 14430750 HCD 30 MS2 67.30368 1690.6 110 48.5072 12909 12909 12902 QEplus033719.raw F4 2585.2 1373.5 1815.8 1289.5 1490.7 1589.2 449 2.73 1 FALSE 1.14E-05 0.0001574 0.819 -250 51988 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAQEVDTYR [R].tAQEVDTYR.[R] N-Term(TMT6plex) 10 Q5U222 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1 B1ARC0; Q3UXW3; Q5U222; Q3V0Z8; B1ARB9; O35662; A1L333; S4R1I6; Q61656; Q8BTS0 RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=8; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=8; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Hlr1 PE=4 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 0 2 2 0.7109 0 1 1 1 656.34094 1311.67461 1311.67421 0.3 0.0002 0/0 0 0 10226308 HCD 30 MS2 0 613.5 110 48.5098 12910 12910 12902 QEplus033719.raw F4 585.3 600.2 660.4 478.5 728.1 628.6 160 3.39 1 FALSE 1.14E-05 5.05E-06 1.104 -250 51995 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAIREHQMAK [K].eAIREHQMAk.[T] N-Term(TMT6plex); K10(TMT6plex) 4 Q3UWX7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tcea1 PE=2 SV=1 P10711-2; E9PYD5; Q3UPE0; Q3UWX7 Isoform 1 of Transcription elongation factor A protein 1 OS=Mus musculus OX=10090 GN=Tcea1; Transcription elongation factor A protein 1 OS=Mus musculus OX=10090 GN=Tcea1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tcea1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tcea1 PE=2 SV=1 1 4 4 0.507 0 1 1 1 418.49075 1670.94118 1670.94123 -0.03 -0.00001 0/0 0 0 6546511.5 HCD 30 MS2 45.80904 772.1 104.752 48.5121 12911 12911 12902 QEplus033719.raw F4 925.7 647 742.2 638.2 946.7 732.7 387 3.59 1 FALSE 1.14E-05 0.0009418 0.667 -250 52024 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHAFVVQQR [K].aHAFVVQQR.[E] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.7599 0 1 1 1 428.91779 1284.7388 1284.73742 1.08 0.00046 0/0 0 0 42112932 HCD 30 MS2 6.719365 215.7 30.996 48.5287 12917 12917 12913 QEplus033719.raw F4 224.5 151.3 213.5 210.4 219.6 275 309 4.04 2 FALSE 1.14E-05 1.47E-06 1.205 -250 52031 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASNDRPPGTGGVK [R].aSNDRPPGTGGVk.[R] N-Term(TMT6plex); K13(TMT6plex) 3 P28650 Adenylosuccinate synthetase isozyme 1 OS=Mus musculus OX=10090 GN=Adss1 PE=1 SV=2 P28650-2; P28650; J3QN31 Isoform 2 of Adenylosuccinate synthetase isozyme 1 OS=Mus musculus OX=10090 GN=Adss1; Adenylosuccinate synthetase isozyme 1 OS=Mus musculus OX=10090 GN=Adss1 PE=1 SV=2; Adenylosuccinate synthetase isozyme 1 OS=Mus musculus OX=10090 GN=Adssl1 PE=1 SV=1 0 3 3 0.6426 0 1 1 1 571.99323 1713.96512 1713.9648 0.19 0.00011 0/0 0 0 28699732 HCD 30 MS2 4.360437 1076.2 64.994 48.531 12918 12918 12913 QEplus033719.raw F4 1405.5 211.3 791.9 2135.4 273.4 1639.5 384 3.05 1 FALSE 1.14E-05 4.68E-06 1.11 -250 52037 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STAVTTGSAK [R].sTAVTTGSAk.[I] N-Term(TMT6plex); K10(TMT6plex) 5 Q64012-2 Isoform 1 of RNA-binding protein Raly OS=Mus musculus OX=10090 GN=Raly Q64012; Q64012-2; A2AU62; A2AU61; Q3TGD3 RNA-binding protein Raly OS=Mus musculus OX=10090 GN=Raly PE=1 SV=3; Isoform 1 of RNA-binding protein Raly OS=Mus musculus OX=10090 GN=Raly; RNA-binding protein Raly (Fragment) OS=Mus musculus OX=10090 GN=Raly PE=1 SV=1; RNA-binding protein Raly (Fragment) OS=Mus musculus OX=10090 GN=Raly PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Raly PE=2 SV=1 0 2 2 0.6658 0 1 1 1 690.909 1380.81072 1380.80987 0.62 0.00043 0/0 0 0 20003954 HCD 30 MS2 27.34504 817.1 94.583 48.5332 12919 12919 12913 QEplus033719.raw F4 908.5 666.4 882.1 653.3 1065.6 726.9 304 4.01 1 FALSE 1.14E-05 1.85E-08 1.566 -250 52061 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIESETVR [K].sIESETVR.[T] N-Term(TMT6plex) 2 O35857 Mitochondrial import inner membrane translocase subunit TIM44 OS=Mus musculus OX=10090 GN=Timm44 PE=1 SV=2 O35857; Q8R3X4 Mitochondrial import inner membrane translocase subunit TIM44 OS=Mus musculus OX=10090 GN=Timm44 PE=1 SV=2; Timm44 protein (Fragment) OS=Mus musculus OX=10090 GN=Timm44 PE=2 SV=1 0 2 2 0.4073 0 1 1 1 575.32013 1149.63298 1149.63128 1.48 0.00085 0/0 0 0 12549231 HCD 30 MS2 56.27699 1291.4 94.099 48.5428 12923 12923 12913 QEplus033719.raw F4 1450 989.4 1418.2 1303.6 1197.8 1389.3 211 2.48 1 FALSE 0.0002218 0.004519 0.513 -250 52078 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESPSGTMK [R].eSPSGTMk.[A] N-Term(TMT6plex); K8(TMT6plex) 4 A0A0R4J107 Acyl-peptide hydrolase (Fragment) OS=Mus musculus OX=10090 GN=Apeh PE=1 SV=1 A0A0R4J107; Q8R146; Q8R146-2; A0A0A6YXV0 Acyl-peptide hydrolase (Fragment) OS=Mus musculus OX=10090 GN=Apeh PE=1 SV=1; Acylamino-acid-releasing enzyme OS=Mus musculus OX=10090 GN=Apeh PE=1 SV=3; Isoform 2 of Acylamino-acid-releasing enzyme OS=Mus musculus OX=10090 GN=Apeh; Acylamino-acid-releasing enzyme (Fragment) OS=Mus musculus OX=10090 GN=Apeh PE=1 SV=1 0 2 2 0.4832 0 1 1 1 647.85815 1294.70903 1294.70771 1.02 0.00066 0/0 0 0 7423990.5 HCD 30 MS2 15.68562 596.9 110 48.5526 12926 12926 12924 QEplus033719.raw F4 674.4 473.4 620.9 583.9 649.9 578.6 341 2.38 1 FALSE 1.14E-05 0.0004474 0.732 -250 52084 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDVDIR [K].cDVDIR.[K] N-Term(TMT6plex); C1(Carbamidomethyl) 23 O89054; Q3UAF6 Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q8BFZ3; Q3UCF8; Q3TSB7; Q9QZ83; O89054; Q3UAF6; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; F8WGM8; Q99NC5; Q3TIJ9; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P63260; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 0 2 2 0.3812 0 1 1 1 503.76373 1006.52019 1006.5189 1.28 0.00065 0/0 0 0 287908032 HCD 30 MS2 7.110499 686.6 4.854 48.5549 12927 12927 12924 QEplus033719.raw F4 741.7 652.7 757.1 496.8 851.2 620 158 2.23 2 FALSE 0.005781 0.09675 0.015 -250 52096 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHHEPQLSDK [R].vHHEPQLSDk.[V] N-Term(TMT6plex); K10(TMT6plex) 8 Q6XLQ8; Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1;Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 Q3UG11; G3UY49; G3UWR0; Q6XLQ8; Q3TL33; G3UWV3; Q3TQD1; Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=1 SV=2; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 0 4 4 0.6089 0 1 1 1 412.73633 1647.92348 1647.92188 0.98 0.0004 0/0 0 0 53202984 HCD 30 MS2 32.45625 413.8 21.116 48.5616 12930 12930 12924 QEplus033719.raw F4 405.7 362.3 430.5 388.9 511.5 383.9 411 3.81 2 FALSE 1.14E-05 0.0008695 0.674 -250 52102 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLTSDLGR [K].rLTSDLGR.[A] N-Term(TMT6plex) 3 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1 1 3 3 0.5188 0 1 1 1 382.89816 1146.67994 1146.67924 0.61 0.00023 0/0 0 0 37572612 HCD 30 MS2 40.50407 411.6 26.299 48.5639 12931 12931 12924 QEplus033719.raw F4 428 325 440 302.8 506.2 467.9 361 3.2 1 FALSE 0.004699 0.08259 0.054 -250 52117 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIAASSQESVGR [R].qIAASSQESVGR.[V] N-Term(TMT6plex) 5 Q3TWN8 Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1 Q3TWN8; Q3UZ27; Q9Z110; Q9Z110-2; Q3UGW8 Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1; Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=1 SV=2; Isoform Short of Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1; Gamma-glutamyl kinase (Fragment) OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1 0 2 2 0.6353 0 1 1 1 731.39716 1461.78703 1461.78589 0.79 0.00057 0/0 0 0 16818630 HCD 30 MS2 20.85892 556.5 110 48.5686 12933 12933 12924 QEplus033719.raw F4 581.4 483.6 606.7 481.9 591.3 594.1 348 3.51 1 FALSE 1.14E-05 2.47E-11 2.112 -250 52126 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHHEPQLSDK [R].vHHEPQLSDk.[V] N-Term(TMT6plex); K10(TMT6plex) 8 Q6XLQ8; Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1;Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 Q3UG11; G3UY49; G3UWR0; Q6XLQ8; Q3TL33; G3UWV3; Q3TQD1; Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=1 SV=2; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 0 3 3 0.6721 0 1 1 1 549.9798 1647.92484 1647.92188 1.8 0.00099 0/0 0 0 16773403 HCD 30 MS2 10.58501 624.3 95.653 48.5709 12934 12934 12924 QEplus033719.raw F4 768.9 535 679.7 481.6 679.7 600.8 412 4.94 2 FALSE 1.14E-05 8.23E-10 1.823 -250 52154 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EKEELEQR [R].ekEELEQR.[E] N-Term(TMT6plex); K2(TMT6plex) 6 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3UEK3; Q6A0B9; Q3TKF9; Q3UL99; Q3UM46 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; MKIAA0139 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.3632 0 1 1 1 506.95639 1518.85462 1518.85279 1.2 0.00061 0/0 0 0 29602902 HCD 30 MS2 15.49246 1273.6 60.075 48.585 12939 12939 12935 QEplus033719.raw F4 1512 1059.6 1395 1037.2 1365.5 1272.5 460 2.01 1 FALSE 0.001257 0.01717 0.308 -250 52159 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVVHESEE [R].mVVHESEE.[-] N-Term(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 0 2 2 0.7773 0 1 1 1 594.79303 1188.57878 1188.5768 1.66 0.00099 0/0 0 0 28036510 HCD 30 MS2 35.44986 452.4 36.466 48.5873 12940 12940 12935 QEplus033719.raw F4 548.5 301.2 386.5 713.2 435.9 329.3 50 2.11 1 FALSE 0.001074 0.01388 0.347 -250 52171 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAETHQQECCQK [K].lAETHQQEccQk.[F] N-Term(TMT6plex); C9(Carbamidomethyl); C10(Carbamidomethyl); K12(TMT6plex) 4 Q3TJN6 Sorting nexin OS=Mus musculus OX=10090 GN=Snx5 PE=2 SV=1 Q8C5E7; Q3TJN6; Q3TXT4; Q9D8U8 Sorting nexin OS=Mus musculus OX=10090 GN=Snx5 PE=2 SV=1; Sorting nexin OS=Mus musculus OX=10090 GN=Snx5 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Snx5 PE=2 SV=1; Sorting nexin-5 OS=Mus musculus OX=10090 GN=Snx5 PE=1 SV=1 0 3 3 0.7517 0 1 1 1 664.00183 1989.99094 1989.98865 1.15 0.00076 0/0 0 0 16972212 HCD 30 MS2 0 508.3 110 48.5923 12942 12942 12935 QEplus033719.raw F4 516.2 407 589.6 402.9 535.5 598.5 173 6.04 1 FALSE 1.14E-05 3.63E-14 2.65 -250 52177 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FSSSSGYGGGSSR [R].fSSSSGYGGGSSR.[V] N-Term(TMT6plex) 1 P35527 "SWISS-PROT:P35527 Tax_Id=9606 Gene_Symbol=KRT9 Keratin, type I cytoskeletal 9" P35527 "SWISS-PROT:P35527 Tax_Id=9606 Gene_Symbol=KRT9 Keratin, type I cytoskeletal 9" 0 2 2 0.8511 0 1 1 1 732.85004 1464.6928 1464.69165 0.78 0.00057 0/0 0 0 15169092 HCD 30 MS2 22.26956 524.9 110 48.5948 12943 12943 12935 QEplus033719.raw F4 474.1 600.2 401.7 619.2 593.1 461.2 60 4.23 1 TRUE 1.14E-05 5.02E-12 2.244 -250 52182 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SFVASNDER [K].sFVASNDER.[V] N-Term(TMT6plex) 2 B2RXS4 Plexin-B2 OS=Mus musculus OX=10090 GN=Plxnb2 PE=1 SV=1 B2RXS4; Q8K2J5 Plexin-B2 OS=Mus musculus OX=10090 GN=Plxnb2 PE=1 SV=1; Plexin B2 OS=Mus musculus OX=10090 GN=Plxnb2 PE=2 SV=1 0 2 2 0.5374 0 1 1 1 627.32013 1253.63298 1253.63235 0.51 0.00032 0/0 0 0 12281798 HCD 30 MS2 15.02199 623.6 110 48.5996 12945 12945 12935 QEplus033719.raw F4 637.8 538.4 715.4 502.5 674.6 672.9 157 3.48 1 FALSE 1.14E-05 9.12E-07 1.245 -250 52204 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHAFVVQQR [K].aHAFVVQQR.[E] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.6882 0 1 1 1 642.87396 1284.74065 1284.73742 2.51 0.00161 0/0 0 0 18981134 HCD 30 MS2 51.76961 1042.5 110 48.6164 12951 12951 12946 QEplus033719.raw F4 1009.8 741.2 1011.7 755 1740 997.2 296 3.56 2 FALSE 1.14E-05 1.23E-05 1.03 -250 52230 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDDMSSR [R].iDDMSSR.[I] N-Term(TMT6plex) 1 Q9CQZ1 Heat shock factor-binding protein 1 OS=Mus musculus OX=10090 GN=Hsbp1 PE=1 SV=1 Q9CQZ1 Heat shock factor-binding protein 1 OS=Mus musculus OX=10090 GN=Hsbp1 PE=1 SV=1 0 2 2 0.6471 0 1 1 1 526.7663 1052.52532 1052.52438 0.89 0.00047 0/0 0 0 13883687 HCD 30 MS2 54.93956 908.5 57.319 48.6234 12954 12954 12946 QEplus033719.raw F4 972.3 792.2 966.3 732.8 1085.7 901.5 111 2.38 1 FALSE 0.0009633 0.01303 0.359 -250 52243 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRPTTGNTLK [R].dRPTTGNTLk.[S] N-Term(TMT6plex); K10(TMT6plex) 3 Q8VCX5 "Calcium uptake protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Micu1 PE=1 SV=1" Q8VCX5; Q8VCX5-3; Q8VCX5-2 "Calcium uptake protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Micu1 PE=1 SV=1; Isoform 3 of Calcium uptake protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Micu1; Isoform 2 of Calcium uptake protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Micu1" 0 3 3 0.3544 0 1 1 1 520.97644 1560.91477 1560.91098 2.43 0.00126 0/0 0 0 12000322 HCD 30 MS2 43.286 929.5 81.888 48.6282 12956 12956 12946 QEplus033719.raw F4 974.2 753.7 932.9 914.8 945.5 1056 510 3.16 1 FALSE 1.14E-05 0.0001605 0.818 -250 52258 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEGAGTEEEGTPK [K].aEGAGTEEEGTPk.[E] N-Term(TMT6plex); K13(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 0 3 3 0.757 0 1 1 1 578.63702 1733.89652 1733.89578 0.43 0.00025 0/0 0 0 12648421 HCD 30 MS2 11.38224 653.4 110 48.638 12959 12959 12957 QEplus033719.raw F4 603.3 616.3 753.7 580.5 665.1 701.4 264 3.91 1 FALSE 1.14E-05 6.82E-08 1.459 -250 52263 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRCTLAEK [K].dRcTLAEk.[L] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 3 P18760 Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3 Q9CX22; P18760; F8WGL3 "Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=2 SV=1; Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1" 1 3 3 0.5385 0 1 1 1 484.27521 1450.81107 1450.80882 1.55 0.00075 0/0 0 0 160108112 HCD 30 MS2 24.93431 921.9 10.446 48.6402 12960 12960 12957 QEplus033719.raw F4 996.1 937.2 933.8 535.9 1373.9 754.6 400 3.38 1 FALSE 1.14E-05 0.000186 0.805 -250 52268 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDVDNASLAR [R].qDVDNASLAR.[L] N-Term(TMT6plex) 8 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 3 3 0.5462 0 1 1 1 439.90402 1317.69751 1317.69601 1.14 0.0005 0/0 0 0 23787246 HCD 30 MS2 64.84386 664.9 37.3 48.6425 12961 12961 12957 QEplus033719.raw F4 735.6 581.6 668.8 540.3 775.8 687.4 278 3.57 2 FALSE 1.14E-05 0.0001456 0.826 -250 52276 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MMMQSGR [R].mMMQSGR.[K] N-Term(TMT6plex) 3 Q8BVI9; P51881 ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a4 PE=2 SV=1;ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3 Q8BVI9; P48962; P51881 ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a4 PE=2 SV=1; ADP/ATP translocase 1 OS=Mus musculus OX=10090 GN=Slc25a4 PE=1 SV=4; ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3 0 2 2 0.6268 0 1 1 1 535.26208 1069.51689 1069.51541 1.39 0.00074 0/0 0 0 20877524 HCD 30 MS2 45.10496 1116.8 67.21 48.6447 12962 12962 12957 QEplus033719.raw F4 1067.1 968.2 1292 970.4 1085.3 1317.6 35 2.09 2 FALSE 0.002148 0.04018 0.174 -250 52285 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMQNDSAENETAEGEEK [R].rMQNDSAENETAEGEEk.[R] N-Term(TMT6plex); K17(TMT6plex) 9 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; E9QA15; E9Q0M9; D3Z6I7; S4R1T7; E9Q9F3; Q7TMN5; E9QA16; Q3TUS1 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Cald1 protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1 1 3 3 0.8359 0 1 1 1 799.38647 2396.14487 2396.14 2.03 0.00162 0/0 0 0 11498649 HCD 30 MS2 0 267.8 110 48.6495 12964 12964 12957 QEplus033719.raw F4 272.2 258.5 285.8 152.7 399.7 237.9 121 7.74 1 FALSE 1.14E-05 6.31E-16 3.861 -250 52293 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGDDSFGDK [R].rGDDSFGDk.[Y] N-Term(TMT6plex); K9(TMT6plex) 7 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 2 2 0.5451 0 1 1 1 727.88562 1454.76396 1454.76398 -0.01 -0.00001 0/0 0 0 9946967 HCD 30 MS2 15.57879 402.2 110 48.652 12965 12965 12957 QEplus033719.raw F4 410.8 366.2 405.5 328.9 526.5 375.3 238 2.77 1 FALSE 0.0002719 0.005496 0.49 -250 52298 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEGAGTEEEGTPK [K].aEGAGTEEEGTPk.[E] N-Term(TMT6plex); K13(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 0 2 2 0.8591 0 1 1 1 867.45349 1733.89971 1733.89578 2.26 0.00196 0/0 0 0 6930439 HCD 30 MS2 0 410.6 110 48.6546 12966 12966 12957 QEplus033719.raw F4 369.4 440.7 475 339.3 422 417.5 261 5.11 1 FALSE 1.14E-05 3.92E-11 2.074 -250 52313 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVDGPSGK [K].tVDGPSGk.[L] N-Term(TMT6plex); K8(TMT6plex) 8 V9GX06; A0A0A0MQF6 Predicted gene 11214 (Fragment) OS=Mus musculus OX=10090 GN=Gm11214 PE=1 SV=1;Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 A0A1D5RLD8; V9GX06; Q8CEV2; A0A0A0MQF6; V9GXA7; P16858; S4R1W1; S4R257 Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm10358 PE=1 SV=1; Predicted gene 11214 (Fragment) OS=Mus musculus OX=10090 GN=Gm11214 PE=1 SV=1; Gp_dh_C domain-containing protein OS=Mus musculus OX=10090 GN=3000002C10Rik PE=2 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Predicted gene 15294 OS=Mus musculus OX=10090 GN=Gm15294 PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=2; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm3839 PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 0 2 2 0.498 0 1 1 1 609.85901 1218.71074 1218.70942 1.08 0.00066 0/0 0 0 33965532 HCD 30 MS2 44.05138 737.9 40.737 48.6644 12969 12969 12968 QEplus033719.raw F4 1243.1 445.9 756.4 735.4 473.9 772.8 493 2.45 2 FALSE 0.0009259 0.01279 0.362 -250 52342 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFNAEVHR [K].eFNAEVHR.[K] N-Term(TMT6plex) 5 P47962 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3 Q3THE1; D3YYV8; P47962; Q3TKR5; Q3U850 Ribosomal_L18_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; 60S ribosomal protein L5 (Fragment) OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=1; 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3; Ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; Ribosomal_L18_c domain-containing protein OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1 0 3 3 0.5873 0 1 1 1 410.88608 1230.64368 1230.64285 0.67 0.00028 0/0 0 0 47642704 HCD 30 MS2 11.20961 261.1 26.358 48.6736 12973 12973 12968 QEplus033719.raw F4 313.3 186.4 273.4 246.5 253.3 293.8 181 3.78 1 FALSE 1.14E-05 2.31E-05 0.978 -250 52348 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YDHCVGEK [K].yDHcVGEk.[Y] N-Term(TMT6plex); C4(Carbamidomethyl); K8(TMT6plex) 2 Q9JM14 "5'(3')-deoxyribonucleotidase, cytosolic type OS=Mus musculus OX=10090 GN=Nt5c PE=1 SV=1" A2A9X5; Q9JM14 "5'(3')-deoxyribonucleotidase, cytosolic type OS=Mus musculus OX=10090 GN=Nt5c PE=1 SV=1; 5'(3')-deoxyribonucleotidase, cytosolic type OS=Mus musculus OX=10090 GN=Nt5c PE=1 SV=1" 0 3 3 0.6202 0 1 1 1 489.25571 1465.75257 1465.75097 1.09 0.00053 0/0 0 0 29726936 HCD 30 MS2 32.27653 873 60.719 48.6782 12975 12975 12968 QEplus033719.raw F4 1025.8 680.1 896.7 790.2 918.2 926.7 221 3.66 1 FALSE 5.44E-05 0.002489 0.577 -250 52353 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDLAYER [K].qDLAYER.[Q] N-Term(TMT6plex) 2 Q8QZY1 Eukaryotic translation initiation factor 3 subunit L OS=Mus musculus OX=10090 GN=Eif3l PE=1 SV=1 A0A2R8VH97; Q8QZY1 Eukaryotic translation initiation factor 3 subunit L (Fragment) OS=Mus musculus OX=10090 GN=Eif3l PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit L OS=Mus musculus OX=10090 GN=Eif3l PE=1 SV=1 0 2 2 0.3388 0 1 1 1 562.30127 1123.59526 1123.5945 0.68 0.00038 0/0 0 0 28395528 HCD 30 MS2 44.04448 1196.9 54.335 48.6804 12976 12976 12968 QEplus033719.raw F4 1275.5 890.4 1343.5 1284.7 1115.4 1272.2 206 2.45 1 FALSE 0.0003996 0.007086 0.456 -250 52370 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQQEILR [K].sQQEILR.[Q] N-Term(TMT6plex) 2 Q9D0F3 Protein ERGIC-53 OS=Mus musculus OX=10090 GN=Lman1 PE=1 SV=1 Q9D0F3; Q3U944 Protein ERGIC-53 OS=Mus musculus OX=10090 GN=Lman1 PE=1 SV=1; L-type lectin-like domain-containing protein OS=Mus musculus OX=10090 GN=Lman1 PE=2 SV=1 0 2 2 0.0208 0 1 1 1 551.82507 1102.64287 1102.64179 0.98 0.00054 0/0 0 0 36183544 HCD 30 MS2 12.45992 685.2 46.495 48.6923 12980 12980 12979 QEplus033719.raw F4 665.7 630.7 784.1 545.3 751.5 734.1 315 2.4 1 FALSE 0.006134 0.1004 0.006 -250 52378 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRCTLAEK [K].dRcTLAEk.[L] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 3 P18760 Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3 Q9CX22; P18760; F8WGL3 "Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=2 SV=1; Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1" 1 2 2 0.4458 0 1 1 1 725.90863 1450.80998 1450.80882 0.8 0.00058 0/0 0 0 33884472 HCD 30 MS2 12.09683 607.1 66.945 48.6945 12981 12981 12979 QEplus033719.raw F4 639.5 596.7 614.4 355.8 947.5 488.6 410 2.4 1 FALSE 0.003397 0.06541 0.1 -250 52399 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELNSNHDGADETSEK [K].eLNSNHDGADETSEk.[E] N-Term(TMT6plex); K15(TMT6plex) 1 Q9EQU5-2 Isoform 2 of Protein SET OS=Mus musculus OX=10090 GN=Set Q9EQU5-2 Isoform 2 of Protein SET OS=Mus musculus OX=10090 GN=Set 0 3 3 0.7897 0 1 1 1 702.0119 2104.02115 2104.01948 0.8 0.00056 0/0 0 0 16656032 HCD 30 MS2 32.97778 558.3 110 48.7061 12986 12986 12979 QEplus033719.raw F4 569.3 589.3 363.3 471.8 1188.8 167.4 151 4.66 1 FALSE 1.14E-05 2.96E-12 2.287 -250 52402 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATQQGLK [K].aTQQGLk.[A] N-Term(TMT6plex); K7(TMT6plex) 4 Q3UHT6 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1 Q3UHT6; P19096; Q3TB22; A0A0U1RNJ1 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2; Fatty acid synthase (Fragment) OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=1 0 2 2 0.4716 0 1 1 1 602.37689 1203.74651 1203.74614 0.3 0.00018 0/0 0 0 11013350 HCD 30 MS2 19.69863 916.9 110 48.7086 12987 12987 12979 QEplus033719.raw F4 1259.7 743.2 1074.8 679 818.8 926 680 2.99 1 FALSE 5.44E-05 0.002303 0.585 -250 52410 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAFRDCEGR [K].vAFRDcEGR.[Y] N-Term(TMT6plex); C6(Carbamidomethyl) 1 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 1 3 3 0.5724 0 1 1 1 446.89856 1338.68113 1338.67858 1.9 0.00085 0/0 0 0 10869612 HCD 30 MS2 54.50934 804.6 77.901 48.7108 12988 12988 12979 QEplus033719.raw F4 1251.6 609.7 761.9 576.1 804.8 823.8 173 3.04 1 FALSE 0.0002218 0.004562 0.512 -250 52418 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QADMQEEK [K].qADMQEEk.[N] N-Term(TMT6plex); K8(TMT6plex) 4 Q11011 Puromycin-sensitive aminopeptidase OS=Mus musculus OX=10090 GN=Npepps PE=1 SV=2 E9Q6F4; F6QYF8; Q11011; E9Q039 Puromycin-sensitive aminopeptidase OS=Mus musculus OX=10090 GN=Npepps PE=1 SV=1; Aminopeptidase (Fragment) OS=Mus musculus OX=10090 GN=Npepps PE=1 SV=1; Puromycin-sensitive aminopeptidase OS=Mus musculus OX=10090 GN=Npepps PE=1 SV=2; Aminopeptidase OS=Mus musculus OX=10090 GN=Npepps PE=1 SV=1 0 2 2 0.5341 0 1 1 1 718.87634 1436.74541 1436.74555 -0.1 -0.00007 0/0 0 0 10766595 HCD 30 MS2 27.15737 662.2 110 48.7134 12989 12989 12979 QEplus033719.raw F4 755.5 496.3 642.5 636.9 741.2 701 253 2.79 1 FALSE 1.14E-05 0.0002816 0.771 -250 52431 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFNAEVHR [K].eFNAEVHR.[K] N-Term(TMT6plex) 5 P47962 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3 Q3THE1; D3YYV8; P47962; Q3TKR5; Q3U850 Ribosomal_L18_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; 60S ribosomal protein L5 (Fragment) OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=1; 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3; Ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; Ribosomal_L18_c domain-containing protein OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1 0 2 2 0.5431 0 1 1 1 615.82623 1230.64519 1230.64285 1.9 0.00117 0/0 0 0 9526400 HCD 30 MS2 0 620.4 110 48.7232 12992 12992 12990 QEplus033719.raw F4 718.4 502.3 667.1 532.9 666.1 635.7 182 2.67 1 FALSE 1.14E-05 0.0004029 0.741 -250 52445 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAIRDGLR [K].dAIRDGLR.[A] N-Term(TMT6plex) 6 Q52KG9 "Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1" Q52KG9; Q3TI62; Q8VEI1; Q3TW97; Q3TI05; Q3TIX8 "Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Cct6a protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1" 1 3 3 0.2901 0 1 1 1 382.2262 1144.66404 1144.66359 0.39 0.00015 0/0 0 0 97594840 HCD 30 MS2 16.18244 330.1 12.671 48.7277 12994 12994 12990 QEplus033719.raw F4 363.1 274.9 368.9 261.9 346.1 366 316 2.62 1 FALSE 0.005847 0.09748 0.013 -250 52446 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DALRDGLR [K].dALRDGLR.[A] N-Term(TMT6plex) 3 Q61390; B1AT05; Q8BVT1 T-complex protein 1 subunit zeta-2 OS=Mus musculus OX=10090 GN=Cct6b PE=1 SV=4; T-complex protein 1 subunit zeta-2 OS=Mus musculus OX=10090 GN=Cct6b PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6b PE=2 SV=1 1 3 3 0.2901 0 1 2 2 382.2262 1144.66404 1144.66359 0.39 0.00015 0/0 0 0 97594840 HCD 30 MS2 16.18244 330.1 12.671 48.7277 12994 12994 12990 QEplus033719.raw F4 363.1 274.9 368.9 261.9 346.1 366 316 2.62 1 FALSE 0.005847 0.09748 0.013 -250 52452 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APPARPVK [K].aPPARPVk.[G] N-Term(TMT6plex); K8(TMT6plex) 1 Q60749 "KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Mus musculus OX=10090 GN=Khdrbs1 PE=1 SV=2" Q60749 "KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Mus musculus OX=10090 GN=Khdrbs1 PE=1 SV=2" 0 3 3 0.5425 0 1 1 1 431.952 1293.84143 1293.84071 0.56 0.00024 0/0 0 0 33184652 HCD 30 MS2 18.73448 689.3 32.86 48.7299 12995 12995 12990 QEplus033719.raw F4 810.3 606.8 663.6 435.4 963.1 656.7 37 2.47 1 FALSE 0.001607 0.02551 0.241 -250 52460 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGHLVHR [R].lGHLVHR.[K] N-Term(TMT6plex) 5 Q58ET1 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=1 SV=1 Q58ET1; V9GX35; Q5EBG5; Q6P1A9; Q80UT7 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=1 SV=1; 60S ribosomal protein L7a (Fragment) OS=Mus musculus OX=10090 GN=Gm14214 PE=3 SV=1; 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=2 SV=1; 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=2 SV=1; 60S ribosomal protein L7a (Fragment) OS=Mus musculus OX=10090 GN=Rpl7a PE=2 SV=1 0 2 2 0.5398 0 1 1 1 530.83289 1060.65849 1060.65771 0.74 0.00039 0/0 0 0 21526498 HCD 30 MS2 56.05361 797 40.968 48.7322 12996 12996 12990 QEplus033719.raw F4 809 665.8 871.8 683.7 837 915 92 2.26 1 FALSE 0.001343 0.01873 0.292 -250 52470 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAIRDGLR [K].dAIRDGLR.[A] N-Term(TMT6plex) 6 Q52KG9 "Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1" Q52KG9; Q3TI62; Q8VEI1; Q3TW97; Q3TI05; Q3TIX8 "Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Cct6a protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1" 1 2 2 0.4195 0 1 1 1 572.83588 1144.66448 1144.66359 0.78 0.00044 0/0 0 0 20973390 HCD 30 MS2 17.63576 650.7 110 48.7347 12997 12997 12990 QEplus033719.raw F4 682.6 538.5 709.7 592.4 662.6 718.6 316 2.05 1 FALSE 0.0008805 0.01222 0.37 -250 52471 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DALRDGLR [K].dALRDGLR.[A] N-Term(TMT6plex) 3 Q61390; B1AT05; Q8BVT1 T-complex protein 1 subunit zeta-2 OS=Mus musculus OX=10090 GN=Cct6b PE=1 SV=4; T-complex protein 1 subunit zeta-2 OS=Mus musculus OX=10090 GN=Cct6b PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6b PE=2 SV=1 1 2 2 0.4195 0 1 2 2 572.83588 1144.66448 1144.66359 0.78 0.00044 0/0 0 0 20973390 HCD 30 MS2 17.63576 650.7 110 48.7347 12997 12997 12990 QEplus033719.raw F4 682.6 538.5 709.7 592.4 662.6 718.6 316 2.05 1 FALSE 0.0008805 0.01222 0.37 -250 52487 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEPATPAEAAQSDR [K].aEPATPAEAAQSDR.[H] N-Term(TMT6plex) 3 Q7TPV4 Myb-binding protein 1A OS=Mus musculus OX=10090 GN=Mybbp1a PE=1 SV=2 A0JLT5; Q3TLF6; Q7TPV4 Mybbp1a protein (Fragment) OS=Mus musculus OX=10090 GN=Mybbp1a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mybbp1a PE=2 SV=1; Myb-binding protein 1A OS=Mus musculus OX=10090 GN=Mybbp1a PE=1 SV=2 0 2 2 0.7482 0 1 1 1 821.91632 1642.82536 1642.82339 1.2 0.00099 0/0 0 0 5066747.5 HCD 30 MS2 39.53954 194.6 110 48.742 13000 13000 12990 QEplus033719.raw F4 182.2 187.7 232.6 146.2 219.5 199.3 141 4.21 1 FALSE 1.14E-05 8.28E-11 2.012 -250 52496 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVAATNMNETSSR [R].tVAATNMNETSSR.[S] N-Term(TMT6plex) 22 A0A5F8MPF0 Kinesin-like protein KIF1B OS=Mus musculus OX=10090 GN=Kif1b PE=1 SV=1 A0A5F8MPF0; Q6TA13; Q3UH16; A2AH75; Q3UUN4; Q6P5H4; Q8VI89; P33173; Q60575; E9Q9G6; Q6A011; Q3UY61; E9Q9B0; Q05BP4; E9QAN4; G3UW47; O35071; A0A087WQE8; Q60575-3; Q60575-2; Q05BI6; Q3V3Y9 Kinesin-like protein KIF1B OS=Mus musculus OX=10090 GN=Kif1b PE=1 SV=1; Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Kif1a PE=2 SV=1; Kinesin-like protein KIF1B OS=Mus musculus OX=10090 GN=Kif1b PE=1 SV=1; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif1a PE=2 SV=1; Kif1a protein OS=Mus musculus OX=10090 GN=Kif1a PE=2 SV=1; Kinesin superfamily protein 1C OS=Mus musculus OX=10090 GN=Kif1c PE=2 SV=1; Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=2; Kinesin-like protein KIF1B OS=Mus musculus OX=10090 GN=Kif1b PE=1 SV=2; Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=1; MKIAA0706 protein (Fragment) OS=Mus musculus OX=10090 GN=Kif1c PE=2 SV=1; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif1b PE=2 SV=1; Kinesin-like protein KIF1C OS=Mus musculus OX=10090 GN=Kif1c PE=1 SV=1; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif1a PE=2 SV=1; Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=1; Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=1; Kinesin-like protein KIF1C OS=Mus musculus OX=10090 GN=Kif1c PE=1 SV=2; Kinesin-like protein KIF1A OS=Mus musculus OX=10090 GN=Kif1a PE=1 SV=1; Isoform 3 of Kinesin-like protein KIF1B OS=Mus musculus OX=10090 GN=Kif1b; Isoform 2 of Kinesin-like protein KIF1B OS=Mus musculus OX=10090 GN=Kif1b; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif1a PE=2 SV=1; Kinesin-like protein OS=Mus musculus OX=10090 GN=Kif1c PE=1 SV=1 0 2 2 0.7483 0 1 1 1 805.90411 1610.80095 1610.80055 0.25 0.0002 0/0 0 0 3790774.75 HCD 30 MS2 0 194.1 110 48.7493 13002 13002 13001 QEplus033719.raw F4 175.3 163.1 215.6 165.2 242.6 202.7 154 4.29 1 FALSE 1.14E-05 1.85E-12 2.326 -250 52511 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEFEHQQK [K].eEFEHQQk.[E] N-Term(TMT6plex); K8(TMT6plex) 15 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 0 3 3 0.7443 0 1 1 1 511.60867 1532.81147 1532.81093 0.35 0.00018 0/0 0 0 64714468 HCD 30 MS2 18.6658 834.1 29.02 48.7541 13004 13004 13001 QEplus033719.raw F4 1048.8 580.5 831 634.2 977.7 932.6 257 3.95 1 FALSE 1.14E-05 6.57E-05 0.892 -250 52515 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSNTLESR [K].vSNTLESR.[L] N-Term(TMT6plex) 2 P50518 V-type proton ATPase subunit E 1 OS=Mus musculus OX=10090 GN=Atp6v1e1 PE=1 SV=2 P50518; Q9D593 V-type proton ATPase subunit E 1 OS=Mus musculus OX=10090 GN=Atp6v1e1 PE=1 SV=2; V-type proton ATPase subunit E 2 OS=Mus musculus OX=10090 GN=Atp6v1e2 PE=1 SV=1 0 2 2 0.4632 0 1 1 1 567.81982 1134.63237 1134.63162 0.66 0.00038 0/0 0 0 34785432 HCD 30 MS2 51.53946 620.7 25.943 48.7586 13006 13006 13001 QEplus033719.raw F4 972.3 382.8 524.7 560.6 799.4 484.4 296 2.31 1 FALSE 7.59E-05 0.002755 0.567 -250 52521 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGMTHIVR [K].aGMTHIVR.[E] N-Term(TMT6plex) 7 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB15; Q3UB90; Q3U9L3; A0A087WQK0; P27659; A0A087WNS0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 (Fragment) OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=1 0 3 3 0.637 0 1 1 1 371.88501 1113.64048 1113.64001 0.41 0.00015 0/0 0 0 23137188 HCD 30 MS2 20.08677 362.6 48.246 48.7609 13007 13007 13001 QEplus033719.raw F4 370.1 266.4 432.4 326.7 303.3 476.6 176 4.05 1 FALSE 1.14E-05 2.77E-05 0.963 -250 52529 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQAVQLPR [K].hQAVQLPR.[E] N-Term(TMT6plex) 6 G3UXA6 Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1 Q8BHD7-2; G3UXZ8; G3UZ01; G3UXA6; Q8BHD7; G8JL74 Isoform 2 of Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3; Polypyrimidine tract-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=8; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1 0 3 3 0.7005 0 1 1 1 393.23837 1177.70057 1177.70031 0.22 0.00009 0/0 0 0 18543436 HCD 30 MS2 10.97027 358.4 75.067 48.7631 13008 13008 13001 QEplus033719.raw F4 386 258.5 367.7 378 346.9 413 359 4.04 1 FALSE 1.14E-05 5.78E-06 1.093 -250 52536 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVYQQQQYGSGGR [K].eVYQQQQYGSGGR.[G] N-Term(TMT6plex) 6 Q544Z3 S1 protein D2 OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1 Q9D6G1; Q8CIR3; Q80XR6; Q544Z3; Q20BD0; Q3TMZ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1; CArG-binding factor A (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; S1 protein D2 OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1 0 2 2 0.6304 0 1 1 1 864.92914 1728.851 1728.85028 0.42 0.00036 0/0 0 0 15547577 HCD 30 MS2 0 526.2 110 48.7656 13009 13009 13001 QEplus033719.raw F4 517.8 548.5 545.6 359.6 760.9 424.7 149 4.6 1 FALSE 1.14E-05 4.13E-12 2.26 -250 52548 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGPLPAEDPAREER [K].rGPLPAEDPAREER.[Q] N-Term(TMT6plex) 4 Q9QXS1 Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q499F9; A0A0R4J218; Q9QXS1-2; Q9QXS1 Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 2 4 4 0.6089 0 1 1 1 456.25024 1821.97915 1821.97687 1.25 0.00057 0/0 0 0 11702754 HCD 30 MS2 37.13622 418.3 110 48.7802 13014 13014 13012 QEplus033719.raw F4 742.2 206.7 306.9 396.6 535.6 321.8 400 3.81 1 FALSE 1.14E-05 9.57E-07 1.241 -250 52555 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLKPEEQR [R].tLkPEEQR.[Q] N-Term(TMT6plex); K3(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.3627 0 1 1 1 486.96088 1458.86808 1458.86805 0.02 0.00001 0/0 0 0 121150920 HCD 30 MS2 36.90248 588.8 7.419 48.7825 13015 13015 13012 QEplus033719.raw F4 635.3 486.8 562.6 567.1 670.8 610 493 1.93 2 FALSE 0.005081 0.08745 0.041 -250 52562 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVAGLR [K].eVAGLR.[Q] N-Term(TMT6plex) 3 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1 0 2 2 0.2039 0 1 1 1 437.27139 873.53551 873.53553 -0.03 -0.00001 0/0 0 0 107795472 HCD 30 MS2 22.97107 601.5 11.504 48.7847 13016 13016 13012 QEplus033719.raw F4 589.3 496.1 670.4 509.3 707.4 636.7 114 2.06 1 FALSE 0.005667 0.09528 0.02 -250 52567 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGVDHVAR [R].iGVDHVAR.[M] N-Term(TMT6plex) 3 Q3UIT2 COP9 signalosome complex subunit 6 OS=Mus musculus OX=10090 GN=Cops6 PE=1 SV=1 Q3UIT2; D3Z0F5; F6QK86 COP9 signalosome complex subunit 6 OS=Mus musculus OX=10090 GN=Cops6 PE=1 SV=1; COP9 signalosome complex subunit 6 OS=Mus musculus OX=10090 GN=Cops6 PE=1 SV=1; COP9 signalosome complex subunit 6 (Fragment) OS=Mus musculus OX=10090 GN=Cops6 PE=1 SV=1 0 3 3 0.5663 0 1 1 1 365.88745 1095.6478 1095.64721 0.54 0.0002 0/0 0 0 31456380 HCD 30 MS2 36.51989 488.4 37.614 48.787 13017 13017 13012 QEplus033719.raw F4 553.4 390.7 421.1 492.1 677 396 104 3.62 1 FALSE 1.14E-05 0.0006 0.707 -250 52576 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVYQQQQYGSGGR [K].eVYQQQQYGSGGR.[G] N-Term(TMT6plex) 6 Q544Z3 S1 protein D2 OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1 Q9D6G1; Q8CIR3; Q80XR6; Q544Z3; Q20BD0; Q3TMZ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1; CArG-binding factor A (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; S1 protein D2 OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1 0 3 3 0.7337 0 1 1 1 576.95551 1728.85196 1728.85028 0.97 0.00056 0/0 0 0 28490618 HCD 30 MS2 9.172649 386.5 60.954 48.7892 13018 13018 13012 QEplus033719.raw F4 399 323.1 398.8 274.7 501.3 422.4 151 4.92 1 FALSE 1.14E-05 4.39E-08 1.495 -250 52582 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAYCSEEK [R].dAYcSEEk.[E] N-Term(TMT6plex); C4(Carbamidomethyl); K8(TMT6plex) 2 B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 P14873; B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=1 SV=2; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 0 2 2 0.4953 0 1 1 1 730.36139 1459.7155 1459.71392 1.09 0.00079 0/0 0 0 15634448 HCD 30 MS2 49.26605 840.4 110 48.7918 13019 13019 13012 QEplus033719.raw F4 852.3 686.4 882.2 784.7 918.1 918.8 108 3.17 1 FALSE 0.0002119 0.004479 0.514 -250 52591 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQEELRK [K].eQEELRk.[L] N-Term(TMT6plex); K7(TMT6plex) 4 Q3V1L7 Peptide-O-fucosyltransferase OS=Mus musculus OX=10090 GN=Pofut2 PE=2 SV=1 A0A1W2P7Z1; A0A1W2P6H4; Q3V1L7; B2RV73 Peptide-O-fucosyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Pofut2 PE=1 SV=1; Peptide-O-fucosyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Pofut2 PE=1 SV=1; Peptide-O-fucosyltransferase OS=Mus musculus OX=10090 GN=Pofut2 PE=2 SV=1; Peptide-O-fucosyltransferase OS=Mus musculus OX=10090 GN=Pofut2 PE=1 SV=1 1 3 3 0.1854 0 1 1 1 463.9425 1389.81296 1389.8102 1.99 0.00092 0/0 0 0 12087670 HCD 30 MS2 5.150939 893.1 110 48.7942 13020 13020 13012 QEplus033719.raw F4 974.7 636.9 953.5 811.8 1056.4 925.1 480 2.05 1 FALSE 0.002878 0.05689 0.122 -250 52596 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TMEEASK [K].tMEEASk.[R] N-Term(TMT6plex); K7(TMT6plex) 1 O70310 Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 O70310 Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 0 2 2 0.3616 0 1 1 1 627.34491 1253.68254 1253.68116 1.1 0.00069 0/0 0 0 7139228 HCD 30 MS2 33.91557 603.4 110 48.7968 13021 13021 13012 QEplus033719.raw F4 899 450.4 677 483.4 518 592.8 273 2.71 1 FALSE 0.0002518 0.005179 0.497 -250 52604 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEFEHQQK [K].eEFEHQQk.[E] N-Term(TMT6plex); K8(TMT6plex) 15 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 0 2 2 0.6849 0 1 1 1 766.91162 1532.81597 1532.81093 3.29 0.00252 0/0 0 0 6422013.5 HCD 30 MS2 0 438 110 48.7993 13022 13022 13012 QEplus033719.raw F4 502.7 295.9 440.3 335.1 551.3 503 284 3.65 1 FALSE 1.14E-05 0.0001033 0.854 -250 52609 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQVSEQSQR [R].lQVSEQSQR.[K] N-Term(TMT6plex) 3 Q3UT40 Motile sperm domain-containing protein 1 OS=Mus musculus OX=10090 GN=Mospd1 PE=2 SV=1 Q3UT40; Q8VEL0-2; Q8VEL0 Motile sperm domain-containing protein 1 OS=Mus musculus OX=10090 GN=Mospd1 PE=2 SV=1; Isoform 2 of Motile sperm domain-containing protein 1 OS=Mus musculus OX=10090 GN=Mospd1; Motile sperm domain-containing protein 1 OS=Mus musculus OX=10090 GN=Mospd1 PE=1 SV=1 0 2 2 0.7151 0 1 1 1 652.36292 1303.71855 1303.71674 1.39 0.0009 0/0 0 0 7787690.5 HCD 30 MS2 16.754 396.2 110 48.8066 13024 13024 13023 QEplus033719.raw F4 429.6 200.3 400 493.3 219.9 634.3 347 3.44 1 FALSE 1.14E-05 1.11E-06 1.229 -250 52626 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATMEAYSR [K].aTMEAYSR.[M] N-Term(TMT6plex) 7 Q922A2 Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1 Q922A2; Q3UYL7; Q07076; Q3TJ49; A0A2C9F2D2; Q8BP75; Q8CCV9 Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1; Annexin A7 OS=Mus musculus OX=10090 GN=Anxa7 PE=1 SV=2; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1 0 2 2 0.5548 0 1 1 1 579.29462 1157.58196 1157.58222 -0.23 -0.00013 0/0 0 0 45064652 HCD 30 MS2 19.64487 659.7 29.504 48.8114 13026 13026 13023 QEplus033719.raw F4 573.3 615.9 758.4 690.2 598.9 721.7 87 2.92 1 FALSE 7.59E-05 0.002856 0.563 -250 52633 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLAEAHAQAK [R].qLAEAHAQAk.[A] N-Term(TMT6plex); K10(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.714 0 1 1 1 508.96866 1524.89142 1524.88985 1.03 0.00053 0/0 0 0 34194572 HCD 30 MS2 26.52073 787.2 55.93 48.8137 13027 13027 13023 QEplus033719.raw F4 914.9 616.4 765.1 687.3 912.6 826.9 380 5.7 2 FALSE 1.14E-05 4.00E-12 2.262 -250 52648 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSYQDAEDK [K].nSYQDAEDk.[K] N-Term(TMT6plex); K9(TMT6plex) 10 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; Q3UGC3; E9QA15; E9Q0M9; D3Z6I7; S4R1T7; E9Q9F3; Q7TMN5; E9QA16; Q3TUS1 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Cald1 protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1 0 2 2 0.7263 0 1 1 1 764.3891 1527.77092 1527.76912 1.18 0.0009 0/0 0 0 19502166 HCD 30 MS2 3.881 941.6 110 48.8207 13030 13030 13023 QEplus033719.raw F4 955.5 968.5 1009.7 531.2 1471.6 713.1 166 3.8 1 FALSE 1.14E-05 3.64E-06 1.131 -250 52656 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLTQTASSTAR [K].dLTQTASSTAR.[A] N-Term(TMT6plex) 6 B9EK95 Myof protein OS=Mus musculus OX=10090 GN=Myof PE=2 SV=1 A0A286YDF5; B9EK95; Q69ZN7-4; E9Q390; A0A286YCZ3; Q69ZN7 Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=1; Myof protein OS=Mus musculus OX=10090 GN=Myof PE=2 SV=1; Isoform 4 of Myoferlin OS=Mus musculus OX=10090 GN=Myof; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=2; Myoferlin (Fragment) OS=Mus musculus OX=10090 GN=Myof PE=1 SV=1; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=2 0 2 2 0.6966 0 1 1 1 690.37067 1379.73406 1379.73279 0.92 0.00063 0/0 0 0 15820936 HCD 30 MS2 64.37593 763.7 110 48.8232 13031 13031 13023 QEplus033719.raw F4 738.1 745.3 860.9 609.4 823.2 805 271 4.35 1 FALSE 1.14E-05 1.27E-09 1.788 -250 52666 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGMTHIVR [K].aGMTHIVR.[E] N-Term(TMT6plex) 7 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB15; Q3UB90; Q3U9L3; A0A087WQK0; P27659; A0A087WNS0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 (Fragment) OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=1 0 2 2 0.6409 0 1 1 1 557.32404 1113.64079 1113.64001 0.7 0.00039 0/0 0 0 14169563 HCD 30 MS2 0 629.3 110 48.8257 13032 13032 13023 QEplus033719.raw F4 534.7 528.1 768.8 517.8 655.3 771.2 176 2.59 1 FALSE 5.44E-05 0.001926 0.602 -250 52671 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEPATPAEAAQSDR [K].aEPATPAEAAQSDR.[H] N-Term(TMT6plex) 3 Q7TPV4 Myb-binding protein 1A OS=Mus musculus OX=10090 GN=Mybbp1a PE=1 SV=2 A0JLT5; Q3TLF6; Q7TPV4 Mybbp1a protein (Fragment) OS=Mus musculus OX=10090 GN=Mybbp1a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mybbp1a PE=2 SV=1; Myb-binding protein 1A OS=Mus musculus OX=10090 GN=Mybbp1a PE=1 SV=2 0 3 3 0.6897 0 1 1 1 548.28003 1642.82553 1642.82339 1.3 0.00071 0/0 0 0 14164118 HCD 30 MS2 43.98846 596.1 110 48.8282 13033 13033 13023 QEplus033719.raw F4 1317.2 353.7 499.6 410.3 509.6 486.3 138 4.19 1 FALSE 1.14E-05 3.31E-07 1.329 -250 52678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRGEVASDAK [K].vRGEVASDAk.[RS] N-Term(TMT6plex); K10(TMT6plex) 2 P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 A0A2R8VHJ0; P16045 Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=1; Galectin-1 OS=Mus musculus OX=10090 GN=Lgals1 PE=1 SV=3 1 3 3 0.5878 0 1 1 1 497.29654 1489.87506 1489.87386 0.81 0.0004 0/0 0 0 68259704 HCD 30 MS2 10.537 785.9 26.889 48.8355 13035 13035 13034 QEplus033719.raw F4 1025.1 586.1 702.4 687.2 1004.5 710.2 460 4.1 1 FALSE 1.14E-05 1.16E-08 1.605 -250 52694 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGTPSAFDR [R].gGTPSAFDR.[I] N-Term(TMT6plex) 9 Q8C605; P47857; P12382 "ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkp PE=1 SV=1;ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=3;ATP-dependent 6-phosphofructokinase, liver type OS=Mus musculus OX=10090 GN=Pfkl PE=1 SV=4" Q9WUA3-2; Q1LZL7; P47857-3; Q8C605; P47857; P12382; Q9WUA3; Q99K08; P47857-2 "Isoform 2 of ATP-dependent 6-phosphofructokinase, platelet type OS=Mus musculus OX=10090 GN=Pfkp; 6-phosphofructokinase (Fragment) OS=Mus musculus OX=10090 GN=Pfkm PE=2 SV=1; Isoform 3 of ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm; ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkp PE=1 SV=1; ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=3; ATP-dependent 6-phosphofructokinase, liver type OS=Mus musculus OX=10090 GN=Pfkl PE=1 SV=4; ATP-dependent 6-phosphofructokinase, platelet type OS=Mus musculus OX=10090 GN=Pfkp PE=1 SV=1; ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkm PE=2 SV=1; Isoform 2 of ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm" 0 2 2 0.5474 0 1 1 1 568.79962 1136.59197 1136.58975 1.95 0.00111 0/0 0 0 41636084 HCD 30 MS2 37.83603 694.5 30.065 48.8401 13037 13037 13034 QEplus033719.raw F4 782.2 371.3 645.5 958.9 533.2 876 171 3.27 3 FALSE 0.0002019 0.004154 0.523 -250 52713 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQEDLK [R].gQEDLk.[E] N-Term(TMT6plex); K6(TMT6plex) 8 Q5SX40; P13541; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q9ESW6; B2RWW8; Q5SX40; P13541; G3UW82; B2RWX0; Q3TT35; P13542 "Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.3046 0 1 1 1 574.34021 1147.67314 1147.67231 0.73 0.00042 0/0 0 0 24880348 HCD 30 MS2 14.60089 1686.6 110 48.8449 13039 13039 13034 QEplus033719.raw F4 2949.5 267.8 1095.2 3226.3 346.9 2234.1 455 1.97 3 FALSE 0.003134 0.06104 0.111 -250 52727 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPSGAPGPDGNK [R].gPSGAPGPDGNk.[G] N-Term(TMT6plex); K12(TMT6plex) 4 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.6675 0 1 1 1 756.4162 1511.82512 1511.82183 2.18 0.00165 0/0 0 0 17733624 HCD 30 MS2 3.933978 601.7 110 48.8497 13041 13041 13034 QEplus033719.raw F4 599.9 461.1 657 435.9 844.1 612.3 351 3.79 1 FALSE 1.14E-05 4.04E-11 2.072 -250 52741 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMDEAATAEER [K].eMDEAATAEER.[G] N-Term(TMT6plex) 11 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 Q3UZD9; Q6NZJ6-2; A0A0J9YVC1; E9Q9E1; Q6PD42; E9Q770; E9PVC5; E9PVC6; A0A0J9YUS5; A0A0J9YUC1; Q6NZJ6 MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 0 2 2 0.7236 0 1 1 1 740.84308 1480.67888 1480.6787 0.12 0.00009 0/0 0 0 6031167.5 HCD 30 MS2 0 330.3 110 48.8545 13043 13043 13034 QEplus033719.raw F4 341.9 277.2 367 285.9 344.7 365.1 35 4.16 1 FALSE 1.14E-05 4.58E-09 1.682 -250 52745 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTSGATPAAIR [K].tTSGATPAAIR.[K] N-Term(TMT6plex) 6 Q3UJ44 Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=2 SV=1 D3YTL5; Q3UJ44; Q3TNN6; D3YU77; D3YZN3; Q99LB4 Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Capg PE=1 SV=1; Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=2 SV=1; Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=2 SV=1; Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Capg PE=1 SV=1; Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Capg PE=1 SV=1; Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=1 SV=1 0 2 2 0.4838 0 1 1 1 637.8681 1274.72893 1274.72658 1.84 0.00117 0/0 0 0 5140880 HCD 30 MS2 0 464.8 110 48.857 13044 13044 13034 QEplus033719.raw F4 448.5 409.6 490.7 408.3 515.8 516.1 386 3.39 1 FALSE 1.14E-05 1.20E-06 1.223 -250 52752 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STGQEYAAK [K].sTGQEYAAk.[S] N-Term(TMT6plex); K9(TMT6plex) 1 Q8BG48 Serine/threonine-protein kinase 17B OS=Mus musculus OX=10090 GN=Stk17b PE=1 SV=1 Q8BG48 Serine/threonine-protein kinase 17B OS=Mus musculus OX=10090 GN=Stk17b PE=1 SV=1 0 2 2 0.619 0 1 1 1 706.89331 1412.77934 1412.77857 0.55 0.00039 0/0 0 0 5084934.5 HCD 30 MS2 0 423.2 110 48.8643 13046 13046 13045 QEplus033719.raw F4 419.7 320.8 490.1 377.2 389.8 541.5 298 3.15 1 FALSE 1.14E-05 2.33E-06 1.167 -250 52760 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDSIDDR [K].vDSIDDR.[H] N-Term(TMT6plex) 4 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q62261; A0A0A0MQG2; Q5DTR4; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; MKIAA4049 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 2 2 0.5443 0 1 1 1 524.77893 1048.55058 1048.54722 3.21 0.00168 0/0 0 0 10456285 HCD 30 MS2 62.84882 793.5 57.137 48.869 13048 13048 13045 QEplus033719.raw F4 1105.8 614 839.1 596.1 713.1 893.2 244 2.37 2 FALSE 0.0003496 0.006606 0.466 -250 52765 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GANAVNPDK [R].gANAVNPDk.[L] N-Term(TMT6plex); K9(TMT6plex) 1 Q9R0E1 Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Mus musculus OX=10090 GN=Plod3 PE=1 SV=1 Q9R0E1 Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Mus musculus OX=10090 GN=Plod3 PE=1 SV=1 0 2 2 0.5373 0 1 1 1 672.38855 1343.76982 1343.76833 1.11 0.00074 0/0 0 0 10107124 HCD 30 MS2 9.300317 664.3 110 48.8716 13049 13049 13045 QEplus033719.raw F4 732.5 555.3 654.6 534 941.9 567.8 384 3.35 1 FALSE 1.14E-05 8.38E-07 1.252 -250 52775 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAHNLVK [R].aAHNLVk.[R] N-Term(TMT6plex); K7(TMT6plex) 7 P47857 "ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=3" Q1LZL7; P47857-3; P47857; Q99K08; A0A2R8VHA5; P47857-2; A0A2R8VHV2 "6-phosphofructokinase (Fragment) OS=Mus musculus OX=10090 GN=Pfkm PE=2 SV=1; Isoform 3 of ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm; ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=3; ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkm PE=2 SV=1; ATP-dependent 6-phosphofructokinase, muscle type (Fragment) OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=1; Isoform 2 of ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm; ATP-dependent 6-phosphofructokinase, muscle type (Fragment) OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=1" 0 3 3 0.5302 0 1 1 1 404.26102 1210.7685 1210.76721 1.06 0.00043 0/0 0 0 9716985 HCD 30 MS2 56.88674 765.9 98.947 48.8739 13050 13050 13045 QEplus033719.raw F4 802.3 432.7 777.9 1024.9 570.5 987 120 2.98 1 FALSE 0.0005944 0.008819 0.424 -250 52796 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQQELEEQTRR [K].aQQELEEQTRR.[A] N-Term(TMT6plex) 2 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 1 3 3 0.7473 0 1 1 1 539.62323 1616.85514 1616.85536 -0.14 -0.00008 0/0 0 0 39699756 HCD 30 MS2 35.1268 852.1 38.942 48.8809 13053 13053 13045 QEplus033719.raw F4 1276 666.6 905.1 630.6 846.2 788.2 288 4.59 1 FALSE 1.14E-05 4.22E-10 1.878 -250 52800 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEEERVTETQK [R].sEEERVTETQk.[N] N-Term(TMT6plex); K11(TMT6plex) 6 P26043 Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3 Q3TS74; P26043; Q3TH46; Q3U111; A0A5F8MPB9; Q3UJJ8 ERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1 1 3 3 0.6038 0 1 1 1 598.66022 1793.9661 1793.96453 0.88 0.00052 0/0 0 0 16820212 HCD 30 MS2 33.62128 887 110 48.8834 13054 13054 13045 QEplus033719.raw F4 943.6 741 961.8 631.2 1044.9 999.3 397 2.65 1 FALSE 1.14E-05 1.74E-06 1.192 -250 52812 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMLQQSK [R].emLQQSk.[I] N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex) 12 P07901; Q71LX8 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4;Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q3TKB9; P07901; Q3TJU7; Q811H6; Q3TKA2; Q80YC2; E9Q3D6; Q3UIF3; A0PJ91; Q71LX8; Q3TKG0; Q8C5U3 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Heat shock protein HSP 90-beta (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 0 2 2 0.2616 0 1 1 1 669.37933 1337.75139 1337.74991 1.11 0.00074 0/0 0 0 14534340 HCD 30 MS2 12.30827 700.3 110 48.893 13057 13057 13056 QEplus033719.raw F4 744.2 534.5 787.1 560.6 829.2 746 383 1.72 2 FALSE 0.009227 0.1696 -0.108 -250 52821 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTTGSYIANR [R].tTTGSYIANR.[V] N-Term(TMT6plex) 1 Q60692 Proteasome subunit beta type-6 OS=Mus musculus OX=10090 GN=Psmb6 PE=1 SV=3 Q60692 Proteasome subunit beta type-6 OS=Mus musculus OX=10090 GN=Psmb6 PE=1 SV=3 0 2 2 0.7266 0 1 1 1 656.85791 1312.70854 1312.70585 2.06 0.00135 0/0 0 0 75165720 HCD 30 MS2 3.992334 606.5 27.319 48.8978 13059 13059 13056 QEplus033719.raw F4 638.2 541.2 676.8 546.1 659.4 577.3 289 3.84 1 FALSE 1.14E-05 1.16E-06 1.225 -250 52826 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQAVQLPR [K].hQAVQLPR.[E] N-Term(TMT6plex) 6 G3UXA6 Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1 Q8BHD7-2; G3UXZ8; G3UZ01; G3UXA6; Q8BHD7; G8JL74 Isoform 2 of Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3; Polypyrimidine tract-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=8; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1 0 3 3 0.4867 0 1 1 1 393.24054 1177.70707 1177.70031 5.74 0.00225 0/0 0 0 27848460 HCD 30 MS2 25.37139 633.6 54.024 48.9023 13061 13061 13056 QEplus033719.raw F4 701.2 495.8 653.3 638.9 672.1 640.5 327 3.39 1 FALSE 1.14E-05 0.0006845 0.695 -250 52835 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLKPEEQR [R].tLkPEEQR.[Q] N-Term(TMT6plex); K3(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5931 0 1 1 1 729.93774 1458.86821 1458.86805 0.11 0.00008 0/0 0 0 11182286 HCD 30 MS2 35.25702 449.8 110 48.907 13063 13063 13056 QEplus033719.raw F4 433.8 361.2 475.7 428.9 495 503.9 493 2.9 2 FALSE 0.0002814 0.00574 0.484 -250 52843 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSQETADVK [R].tSQETADVk.[A] N-Term(TMT6plex); K9(TMT6plex) 1 Q8BJ71 Nuclear pore complex protein Nup93 OS=Mus musculus OX=10090 GN=Nup93 PE=1 SV=1 Q8BJ71 Nuclear pore complex protein Nup93 OS=Mus musculus OX=10090 GN=Nup93 PE=1 SV=1 0 2 2 0.2204 0 1 1 1 718.90558 1436.80388 1436.79969 2.91 0.00209 0/0 0 0 10978811 HCD 30 MS2 53.16786 804.6 109.754 48.9095 13064 13064 13056 QEplus033719.raw F4 813.3 590.1 793.5 810.2 960.8 859.5 418 2.45 1 FALSE 1.14E-05 3.84E-06 1.126 -250 52849 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAPSTGGVK [K].sAPSTGGVk.[K] N-Term(TMT6plex); K9(TMT6plex) 6 P84244 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2 P84244; P02301; E0CZ27; E0CYR7; F8WI35; E0CYN1 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; H3.3 histone A (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; H3.3 histone A (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1 0 2 2 0.4207 0 1 1 1 631.37939 1261.75151 1261.75162 -0.09 -0.00005 0/0 0 0 10655737 HCD 30 MS2 34.7253 1316.5 110 48.9121 13065 13065 13056 QEplus033719.raw F4 1477.9 1180.3 1238.3 1003.9 1892.6 1106.1 669 2.9 1 FALSE 1.14E-05 3.91E-06 1.125 -250 52858 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVIESDEEQGR [R].aVIESDEEQGR.[T] N-Term(TMT6plex) 2 Q9CZC8 Secernin-1 OS=Mus musculus OX=10090 GN=Scrn1 PE=1 SV=1 A0A0N4SWD0; Q9CZC8 Secernin-1 (Fragment) OS=Mus musculus OX=10090 GN=Scrn1 PE=1 SV=1; Secernin-1 OS=Mus musculus OX=10090 GN=Scrn1 PE=1 SV=1 0 2 2 0.5868 0 1 1 1 731.37115 1461.73503 1461.73827 -2.21 -0.00162 0/0 0 0 9660244 HCD 30 MS2 48.74985 545.9 110 48.9146 13066 13066 13056 QEplus033719.raw F4 524.6 448.1 602.6 467.9 650.7 581.6 152 4.09 1 FALSE 1.14E-05 1.04E-08 1.614 -250 52867 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGLNQIPNRR [R].sGLNQIPNRR.[F] N-Term(TMT6plex) 1 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 1 3 3 0.2465 0 1 1 1 461.93887 1383.80207 1383.80181 0.18 0.00009 0/0 0 0 18229030 HCD 30 MS2 41.6531 957.1 72.762 48.9219 13068 13068 13067 QEplus033719.raw F4 2255.7 547.7 725.1 603.8 799 811.3 315 2.84 1 FALSE 0.0001504 0.003451 0.543 -250 52881 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGLNQIPNRR [R].sGLNQIPNRR.[F] N-Term(TMT6plex) 1 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 1 3 3 0.4194 0 1 1 1 461.93887 1383.80207 1383.80181 0.18 0.00009 0/0 0 0 18229030 HCD 30 MS2 41.6531 957.1 42.106 48.9266 13070 13070 13067 QEplus033719.raw F4 2255.7 547.7 725.1 603.8 799 811.3 315 3.1 1 FALSE 0.0001504 0.003277 0.549 -250 52889 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVYHAEEVQCDGR [R].tVYHAEEVQcDGR.[ST] N-Term(TMT6plex); C10(Carbamidomethyl) 8 Q71V27 Smooth muscle LIM protein OS=Mus musculus OX=10090 GN=Csrp2 PE=2 SV=1 A0A1W2P758; Q71V27; A0A1W2P780; A0A1W2P6I3; A0A1W2P845; A0A1W2P7N8; Q9D1M8; P97314 Cysteine and glycine-rich protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Csrp2 PE=1 SV=1; Smooth muscle LIM protein OS=Mus musculus OX=10090 GN=Csrp2 PE=2 SV=1; Cysteine and glycine-rich protein 2 OS=Mus musculus OX=10090 GN=Csrp2 PE=1 SV=1; Cysteine and glycine-rich protein 2 OS=Mus musculus OX=10090 GN=Csrp2 PE=1 SV=1; Cysteine and glycine-rich protein 2 OS=Mus musculus OX=10090 GN=Csrp2 PE=1 SV=1; Cysteine and glycine-rich protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Csrp2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csrp2 PE=2 SV=1; Cysteine and glycine-rich protein 2 OS=Mus musculus OX=10090 GN=Csrp2 PE=1 SV=3 0 3 3 0.8818 0 1 1 1 598.2887 1792.85154 1792.84856 1.66 0.00099 0/0 0 0 16534257 HCD 30 MS2 40.33837 544.7 93.029 48.9289 13071 13071 13067 QEplus033719.raw F4 626.5 448.4 562 397 656.9 577.2 76 4.57 1 FALSE 1.14E-05 8.85E-13 2.387 -250 52901 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSDSGTYTCK [K].tSDSGTYTck.[V] N-Term(TMT6plex); C9(Carbamidomethyl); K10(TMT6plex) 5 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.6848 0 1 1 1 789.3985 1577.78972 1577.78814 1 0.00079 0/0 0 0 9407269 HCD 30 MS2 5.361403 525.7 110 48.9337 13073 13073 13067 QEplus033719.raw F4 567.9 95.8 440 1107.1 98.8 844.6 140 3.87 2 FALSE 1.14E-05 8.15E-08 1.444 -250 52908 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAPLPNDSQAR [R].sAPLPNDSQAR.[S] N-Term(TMT6plex) 3 Q9CZS7 PIPK domain-containing protein OS=Mus musculus OX=10090 GN=Pip4k2a PE=2 SV=1 F6RJE8; Q9CZS7; O70172 Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha (Fragment) OS=Mus musculus OX=10090 GN=Pip4k2a PE=1 SV=1; PIPK domain-containing protein OS=Mus musculus OX=10090 GN=Pip4k2a PE=2 SV=1; Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha OS=Mus musculus OX=10090 GN=Pip4k2a PE=1 SV=1 0 2 2 0.6948 0 1 1 1 692.87372 1384.74016 1384.73821 1.41 0.00098 0/0 0 0 6751095.5 HCD 30 MS2 19.92138 455 110 48.9387 13075 13075 13067 QEplus033719.raw F4 655.3 330 459.2 357.4 468.6 459.2 216 3.44 1 FALSE 1.14E-05 1.92E-05 0.994 -250 52926 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APPARPVK [K].aPPARPVk.[G] N-Term(TMT6plex); K8(TMT6plex) 1 Q60749 "KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Mus musculus OX=10090 GN=Khdrbs1 PE=1 SV=2" Q60749 "KH domain-containing, RNA-binding, signal transduction-associated protein 1 OS=Mus musculus OX=10090 GN=Khdrbs1 PE=1 SV=2" 0 2 2 0.6497 0 1 1 1 647.4248 1293.84233 1293.84071 1.25 0.00081 0/0 0 0 2946393.5 HCD 30 MS2 58.66211 385 110 48.951 13079 13079 13078 QEplus033719.raw F4 414.2 292.1 381.1 375.8 489.3 357.4 22 1.97 1 FALSE 0.006767 0.1077 -0.014 -250 52942 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SINNPDMR [K].sINNPDMR.[V] N-Term(TMT6plex) 6 Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1;ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TED3; Q3UEA1; Q3UVY4; Q3V117; Q91V92; Q99K05 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate (pro-S-)-lyase (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; Acly protein (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1 0 2 2 0.4444 0 1 1 1 588.30908 1175.61089 1175.60402 5.84 0.00343 0/0 0 0 59320328 HCD 30 MS2 56.8657 704.4 11.075 48.9555 13081 13081 13078 QEplus033719.raw F4 756.3 657.7 771.2 512.8 821.4 706.8 221 1.98 2 FALSE 0.001101 0.01423 0.342 -250 52950 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIQQSVR [R].vIQQSVR.[L] N-Term(TMT6plex) 12 H3BJU7 Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1 H3BJU7; Q60875-3; H3BKH9; Q60875; Q60875-5; H3BJX8; Q60875-2; Q3TYZ4; H3BJ40; H3BJ45; A0A2X0SFE2; Q60875-4 Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Isoform 3 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=4; Isoform 5 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=2; Isoform 2 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2; Guanine nucleotide exchange factor H1 (Fragment) OS=Mus musculus OX=10090 GN=Arhgef2 PE=2 SV=1; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Guanine nucleotide exchange factor H1 (Fragment) OS=Mus musculus OX=10090 GN=ARHGEF2 PE=4 SV=1; Isoform 4 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2 0 2 2 0.3992 0 1 1 1 529.83069 1058.6541 1058.65196 2.02 0.00107 0/0 0 0 20502220 HCD 30 MS2 42.69528 1120.7 76.886 48.9577 13082 13082 13078 QEplus033719.raw F4 1107.8 915.6 1232.7 939.7 1270.6 1257.7 173 2.38 1 FALSE 0.00116 0.01552 0.326 -250 52960 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AERPDVDEK [K].aERPDVDEk.[R] N-Term(TMT6plex); K9(TMT6plex) 2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q80U36; Q9JHU4 MKIAA0325 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 3 3 0.5576 0 1 1 1 506.28519 1516.84101 1516.83714 2.55 0.00129 0/0 0 0 13353733 HCD 30 MS2 42.51369 1203.3 110 48.9602 13083 13083 13078 QEplus033719.raw F4 1317.6 969.8 1314.8 1009.1 1280.4 1328 358 2.17 1 FALSE 0.004288 0.07859 0.065 -250 52966 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFNSYGSR [R].eFNSYGSR.[R] N-Term(TMT6plex) 2 Q8VDC3 Citrate hydro-lyase OS=Mus musculus OX=10090 GN=aco1 PE=3 SV=1 Q8VDC3; P28271 Citrate hydro-lyase OS=Mus musculus OX=10090 GN=aco1 PE=3 SV=1; Cytoplasmic aconitate hydratase OS=Mus musculus OX=10090 GN=Aco1 PE=1 SV=3 0 2 2 0.5874 0 1 1 1 594.79633 1188.58537 1188.58467 0.6 0.00035 0/0 0 0 13267301 HCD 30 MS2 26.4074 825.4 110 48.9628 13084 13084 13078 QEplus033719.raw F4 844.4 767 930.1 706.3 888.5 816.2 58 2.69 1 FALSE 1.14E-05 0.0007727 0.685 -250 52974 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGTTPKPK [R].eGTTPkPk.[R] N-Term(TMT6plex); K6(TMT6plex); K8(TMT6plex) 1 Q9D823 60S ribosomal protein L37 OS=Mus musculus OX=10090 GN=Rpl37 PE=1 SV=3 Q9D823 60S ribosomal protein L37 OS=Mus musculus OX=10090 GN=Rpl37 PE=1 SV=3 0 3 3 0.2688 0 1 1 1 515.65906 1544.96262 1544.9615 0.72 0.00037 0/0 0 0 10376485 HCD 30 MS2 51.50359 1531.8 110 48.9652 13085 13085 13078 QEplus033719.raw F4 3134.3 933.6 1458.3 1122.7 1028.8 1513.1 316 1.86 1 FALSE 0.005276 0.0899 0.034 -250 52981 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGQDISK [K].eGQDISk.[R] N-Term(TMT6plex); K7(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1; Q8BUJ0 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1 0 2 2 0.295 0 1 1 1 617.85553 1234.70378 1234.70434 -0.45 -0.00028 0/0 0 0 4917560 HCD 30 MS2 15.8943 711.7 110 48.9678 13086 13086 13078 QEplus033719.raw F4 1093.2 284 581.3 1031.2 369.1 911.2 473 2.61 2 FALSE 0.0006216 0.009306 0.416 -250 52984 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECSEVQPK [R].ecSEVQPk.[L] N-Term(TMT6plex); C2(Carbamidomethyl); K8(TMT6plex) 1 Q9CQ75 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Mus musculus OX=10090 GN=Ndufa2 PE=1 SV=3 Q9CQ75 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Mus musculus OX=10090 GN=Ndufa2 PE=1 SV=3 0 3 3 0.5414 0 1 1 1 478.92776 1434.76874 1434.76629 1.71 0.00082 0/0 0 0 18264810 HCD 30 MS2 57.07858 1136.7 96.959 48.9701 13087 13087 13078 QEplus033719.raw F4 1667.6 796 1059.3 990.7 1071.9 1234.5 331 2.9 1 FALSE 0.001083 0.01405 0.345 -250 52989 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECSEVQPK [R].ecSEVQPk.[L] N-Term(TMT6plex); C2(Carbamidomethyl); K8(TMT6plex) 1 Q9CQ75 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Mus musculus OX=10090 GN=Ndufa2 PE=1 SV=3 Q9CQ75 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Mus musculus OX=10090 GN=Ndufa2 PE=1 SV=3 0 2 2 0.6846 0 1 1 1 717.88757 1434.76787 1434.76629 1.1 0.00079 0/0 0 0 14858588 HCD 30 MS2 11.80859 649.2 110 48.9726 13088 13088 13078 QEplus033719.raw F4 685.8 439.3 625.6 804 593.4 747.1 322 2.98 1 FALSE 1.14E-05 0.0004621 0.729 -250 52997 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDVDNASLAR [R].qDVDNASLAR.[L] N-Term(TMT6plex) 8 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.6031 0 1 1 1 659.35236 1317.69744 1317.69601 1.08 0.00071 0/0 0 0 441111168 HCD 30 MS2 3.08955 406.9 3.882 48.9799 13090 13090 13089 QEplus033719.raw F4 380.9 428.5 434.3 308.4 512.8 376.7 278 3.88 2 FALSE 1.14E-05 4.26E-07 1.308 -250 53009 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIAANEENRK [K].dIAANEENRk.[W] N-Term(TMT6plex); K10(TMT6plex) 2 Q9JJU8 SH3 domain-binding glutamic acid-rich-like protein OS=Mus musculus OX=10090 GN=Sh3bgrl PE=1 SV=1 Q3U9A8; Q9JJU8 SH3 domain-binding glutamic acid-rich-like protein OS=Mus musculus OX=10090 GN=Sh3bgrl PE=2 SV=1; SH3 domain-binding glutamic acid-rich-like protein OS=Mus musculus OX=10090 GN=Sh3bgrl PE=1 SV=1 1 3 3 0.6324 0 1 1 1 539.97302 1617.90451 1617.89605 5.23 0.00282 0/0 0 0 131874056 HCD 30 MS2 36.53226 1004.6 10.658 48.9847 13092 13092 13089 QEplus033719.raw F4 1072.6 995.6 1159.8 671.6 1214.5 913.3 412 3.21 1 FALSE 1.14E-05 0.0006055 0.706 -250 53017 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVHSGDFVR [R].tVHSGDFVR.[Y] N-Term(TMT6plex) 1 Q9Z247 Peptidyl-prolyl cis-trans isomerase FKBP9 OS=Mus musculus OX=10090 GN=Fkbp9 PE=1 SV=1 Q9Z247 Peptidyl-prolyl cis-trans isomerase FKBP9 OS=Mus musculus OX=10090 GN=Fkbp9 PE=1 SV=1 0 3 3 0.4377 0 1 1 1 416.23013 1246.67585 1246.67415 1.36 0.00056 0/0 0 0 62035736 HCD 30 MS2 42.68888 410.3 16.315 48.9869 13093 13093 13089 QEplus033719.raw F4 424.8 341.8 417.4 323.1 507.1 447.4 293 3.29 1 FALSE 5.44E-05 0.001865 0.605 -250 53024 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RACYGVLR [R].rAcYGVLR.[F] N-Term(TMT6plex); C3(Carbamidomethyl) 7 Q5YLW3 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1 Q9D0A2; D3YV43; Q9CZP6; Q3UCL7; O89068; Q5YLW3; Q3UK56 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; Ribosomal protein S3 (Fragment) OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1 1 3 3 0.3257 0 1 1 1 408.56796 1223.68933 1223.68803 1.07 0.00044 0/0 0 0 53043136 HCD 30 MS2 48.91707 593.6 18.531 48.9892 13094 13094 13089 QEplus033719.raw F4 534 506.4 660.8 560.3 659.9 639.9 295 3.5 1 FALSE 1.14E-05 0.0001137 0.846 -250 53031 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYVQSK [K].gYVQSk.[E] N-Term(TMT6plex); K6(TMT6plex) 4 Q3ULJ5 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 Q3ULJ5; Q3U5M8; P14685; Q8BK46 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus OX=10090 GN=Psmd3 PE=1 SV=3; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 0 2 2 0.0708 0 1 1 1 570.34534 1139.6834 1139.68248 0.8 0.00046 0/0 0 0 33200680 HCD 30 MS2 44.07076 1046 32.633 48.9914 13095 13095 13089 QEplus033719.raw F4 1086.9 734.9 1143 1236.9 919.3 1155 155 2.4 1 FALSE 0.003497 0.06759 0.094 -250 53041 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEAEKPETSENTETSGK [R].hEAEkPETSENTETSGk.[I] N-Term(TMT6plex); K5(TMT6plex); K17(TMT6plex) 4 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q8CD09; Q9ERG0; Q8C3R7; Q8BT15 LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 0 4 4 0.5978 0 1 1 1 641.08881 2561.33339 2561.3298 1.4 0.0009 0/0 0 0 12556256 HCD 30 MS2 12.42404 595.3 110 48.9939 13096 13096 13089 QEplus033719.raw F4 627.4 520.4 748.4 405 649.3 621.5 400 5.52 1 FALSE 1.14E-05 1.21E-11 2.171 -250 53049 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIEDPEDR [R].eIEDPEDR.[K] N-Term(TMT6plex) 2 Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 Q3TXE5; Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 0 2 2 0.5565 0 1 1 1 616.30573 1231.60417 1231.60038 3.08 0.0019 0/0 0 0 8627932 HCD 30 MS2 36.36469 800.8 110 48.9989 13098 13098 13089 QEplus033719.raw F4 880.4 639.2 858.9 727.4 837.8 861.2 49 3.36 1 FALSE 1.14E-05 0.0006371 0.701 -250 53056 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQAHPQLKPEER [R].aQAHPQLkPEER.[E] N-Term(TMT6plex); K8(TMT6plex) 1 Q921K8 TRPM8 channel-associated factor 2 OS=Mus musculus OX=10090 GN=Tcaf2 PE=1 SV=1 Q921K8 TRPM8 channel-associated factor 2 OS=Mus musculus OX=10090 GN=Tcaf2 PE=1 SV=1 0 4 4 0.4444 0 1 1 1 466.27179 1862.06533 1862.06485 0.26 0.00012 0/0 0 0 7677921.5 HCD 30 MS2 32.35931 577.8 110 49.0014 13099 13099 13089 QEplus033719.raw F4 611.9 523.6 626.3 513 583 608.7 454 4.14 1 FALSE 1.14E-05 0.0006913 0.694 -250 53070 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVENSEDPK [R].eVENSEDPk.[F] N-Term(TMT6plex); K9(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 2 2 0.2248 0 1 1 1 752.89862 1504.78996 1504.78952 0.29 0.00022 0/0 0 0 11230932 HCD 30 MS2 8.842563 498.4 110 49.0113 13102 13102 13100 QEplus033719.raw F4 490.5 468.3 531.2 475.7 554.3 470.5 277 2.58 1 FALSE 1.14E-05 4.14E-05 0.93 -250 53082 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADQDSEAMK [K].aDQDSEAMk.[R] N-Term(TMT6plex); K9(TMT6plex) 15 A0A1L1SQ51; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1;Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q71LX4; A0A1L1SRI1; Q80TM2; A0A1L1SQ51; B2RY15; Q9CS79; Q6PB69; Q8CHG4; Q8CDM9; A0A1L1SQP9; Q0V930; Q3UHS6; Q3TBC3; E9PUM4; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=3; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Tln2 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; MKIAA0320 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.6474 0 1 1 1 726.87097 1452.73467 1452.74047 -3.99 -0.0029 0/0 0 0 21636090 HCD 30 MS2 32.18213 912.2 66.656 49.0203 13106 13106 13100 QEplus033719.raw F4 994.9 683.3 904.2 703.5 1373.2 814.3 151 3.46 2 FALSE 1.14E-05 5.92E-06 1.091 -250 53089 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TCSGGSAVLCR [K].tcSGGSAVLcR.[D] N-Term(TMT6plex); C2(Carbamidomethyl); C10(Carbamidomethyl) 21 Q3U8C4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1 Q3TID4; K3W4L3; Q3TWF9; Q3U8C4; Q3UE29; Q3U825; Q8BFQ1; Q3TWL8; Q3TKK3; J3QPG5; Q3TIT5; Q3TXJ0; B2RUD7; Q3TXP9; Q3UFE8; Q3TWE9; Q3UAS4; Q3TKB2; Q3U5W2; Q3U897; E9PZ00 Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Prosaposin OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Prosaposin OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Prosaposin OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Psap protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Prosaposin OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1 0 2 2 0.6597 0 1 1 1 698.8479 1396.68852 1396.68744 0.78 0.00054 0/0 0 0 17575600 HCD 30 MS2 4.264482 473.3 110 49.0228 13107 13107 13100 QEplus033719.raw F4 468.4 380.7 541.8 428.1 495.7 524.8 125 3.85 1 FALSE 1.14E-05 1.26E-09 1.788 -250 53096 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIAANEENRK [K].dIAANEENRk.[W] N-Term(TMT6plex); K10(TMT6plex) 2 Q9JJU8 SH3 domain-binding glutamic acid-rich-like protein OS=Mus musculus OX=10090 GN=Sh3bgrl PE=1 SV=1 Q3U9A8; Q9JJU8 SH3 domain-binding glutamic acid-rich-like protein OS=Mus musculus OX=10090 GN=Sh3bgrl PE=2 SV=1; SH3 domain-binding glutamic acid-rich-like protein OS=Mus musculus OX=10090 GN=Sh3bgrl PE=1 SV=1 1 2 2 0.6957 0 1 1 1 809.45844 1617.90959 1617.89605 8.37 0.00677 0/0 0 0 6957206 HCD 30 MS2 8.000786 409.9 110 49.0253 13108 13108 13100 QEplus033719.raw F4 391.2 421.9 457.9 275 527.5 386.1 456 3.91 1 FALSE 1.14E-05 1.18E-07 1.414 -250 53103 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVCSQQYR [K].mVcSQQYR.[F] N-Term(TMT6plex); C3(Carbamidomethyl) 3 Q0GNC1 Inverted formin-2 OS=Mus musculus OX=10090 GN=Inf2 PE=1 SV=1 Q0GNC1; E9QLA5; Q0GNC1-3 Inverted formin-2 OS=Mus musculus OX=10090 GN=Inf2 PE=1 SV=1; Inverted formin-2 OS=Mus musculus OX=10090 GN=Inf2 PE=1 SV=1; Isoform 2 of Inverted formin-2 OS=Mus musculus OX=10090 GN=Inf2 0 2 2 0.7134 0 1 1 1 650.82104 1300.63481 1300.63394 0.67 0.00044 0/0 0 0 7631273.5 HCD 30 MS2 0 485.6 110 49.0278 13109 13109 13100 QEplus033719.raw F4 455.6 465.9 521.2 381.7 629.2 460.2 62 3.07 1 FALSE 5.44E-05 0.002531 0.575 -250 53119 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAGSGELK [K].gAGSGELk.[V] N-Term(TMT6plex); K8(TMT6plex) 8 B9EKP5; Q8VHX6 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1;Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3" Q3U7N9; B7FAV1; F6XC15; B9EKP5; Q8BTM8; Q8VHX6-2; Q8VHX6; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.4405 0 1 1 1 588.85364 1176.7 1176.69886 0.97 0.00057 0/0 0 0 158003808 HCD 30 MS2 33.39654 871.6 6.572 49.0377 13112 13112 13111 QEplus033719.raw F4 987.3 787.2 932.3 630.5 1132.3 759.9 412 2.27 2 FALSE 5.44E-05 0.002551 0.575 -250 53128 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQQESGCK [R].iQQESGck.[I] N-Term(TMT6plex); C7(Carbamidomethyl); K8(TMT6plex) 10 A0A0G2JFY5 Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1 A0A0G2JFY5; Q91WJ8-2; A0A0G2JGW9; Q0P6B2; A0A0G2JG00; A0A0G2JFK2; Q3TUE1; Q91WJ8; Q3UUU2; Q3TIS5 Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Isoform 2 of Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element (FUSE) binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=2 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fubp1 PE=2 SV=1 0 2 2 0.595 0 1 1 1 704.38916 1407.77104 1407.76662 3.14 0.00221 0/0 0 0 4901112.5 HCD 30 MS2 23.01764 481 110 49.0402 13113 13113 13111 QEplus033719.raw F4 598.2 445.7 551.9 340.6 559.1 390.5 375 3.21 1 FALSE 1.14E-05 8.89E-05 0.867 -250 53137 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGANNLER [R].mGANNLER.[M] N-Term(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; Q9D0E1-2; Q3TQ66; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 2 2 0.4345 0 1 1 1 567.3009 1133.59453 1133.59346 0.95 0.00054 0/0 0 0 140326192 HCD 30 MS2 7.001031 577.5 9.706 49.0425 13114 13114 13111 QEplus033719.raw F4 513.7 611.3 691.6 386.4 657.3 605 221 2.9 1 FALSE 2.26E-05 0.001007 0.662 -250 53150 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AELDGSERK [R].aELDGSERk.[V] N-Term(TMT6plex); K9(TMT6plex) 7 Q8R5G0 Nidogen 2 protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1 Q8C6Z2; Q8R5G0; A0A286YCQ5; Q3US45; Q3TPN0; Q8CFA3; O88322 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen 2 protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen-2 (Fragment) OS=Mus musculus OX=10090 GN=Nid2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen-2 OS=Mus musculus OX=10090 GN=NID-2 PE=4 SV=1; Nidogen-2 OS=Mus musculus OX=10090 GN=Nid2 PE=1 SV=2 1 3 3 0.4167 0 1 1 1 488.28107 1462.82865 1462.82658 1.41 0.00069 0/0 0 0 25715544 HCD 30 MS2 52.39104 995.5 30.087 49.047 13116 13116 13111 QEplus033719.raw F4 1365.4 639.2 1052.2 1009.2 748.7 1158.5 464 3 1 FALSE 1.14E-05 0.0006667 0.698 -250 53153 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNSINTSK [K].dNSINTSk.[H] N-Term(TMT6plex); K8(TMT6plex) 10 G3XA35 Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1 E9QMK3; E9PYH0; G3XA35; Q62059; E9QMK2; P70267; Q62059-4; Q3TTS3; Q62059-2; Q62059-3 Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=2; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; PG-M core protein (Fragment) OS=Mus musculus OX=10090 GN=pgM PE=4 SV=1; Isoform V3 of Versican core protein OS=Mus musculus OX=10090 GN=Vcan; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Vcan PE=2 SV=1; Isoform V1 of Versican core protein OS=Mus musculus OX=10090 GN=Vcan; Isoform V2 of Versican core protein OS=Mus musculus OX=10090 GN=Vcan 0 2 2 0.5725 0 1 1 1 668.87823 1336.74919 1336.74727 1.44 0.00096 0/0 0 0 21219130 HCD 30 MS2 32.69605 1032.7 110 49.0495 13117 13117 13111 QEplus033719.raw F4 1094.4 809.1 1153.8 989.8 1042.9 1105.9 377 2.76 1 FALSE 0.0008445 0.01169 0.378 -250 53162 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HPMSEYK [K].hPMSEYk.[S] N-Term(TMT6plex); K7(TMT6plex) 1 Q8K297 Procollagen galactosyltransferase 1 OS=Mus musculus OX=10090 GN=Colgalt1 PE=1 SV=2 Q8K297 Procollagen galactosyltransferase 1 OS=Mus musculus OX=10090 GN=Colgalt1 PE=1 SV=2 0 3 3 0.6688 0 1 1 1 450.58133 1349.72943 1349.72878 0.49 0.00022 0/0 0 0 9868027 HCD 30 MS2 24.08246 819.2 110 49.052 13118 13118 13111 QEplus033719.raw F4 866.9 727.8 832.6 735.3 1011.8 740.6 389 3.08 1 FALSE 1.14E-05 0.0004509 0.731 -250 53191 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIGTDNVCR [R].sIGTDNVcR.[D] N-Term(TMT6plex); C8(Carbamidomethyl) 3 Q8K2V6 Importin-11 OS=Mus musculus OX=10090 GN=Ipo11 PE=1 SV=1 Q8BXQ4; Q8K2V6-2; Q8K2V6 Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Ipo11 PE=2 SV=1; Isoform 2 of Importin-11 OS=Mus musculus OX=10090 GN=Ipo11; Importin-11 OS=Mus musculus OX=10090 GN=Ipo11 PE=1 SV=1 0 2 2 0.5361 0 1 1 1 625.82098 1250.63469 1250.63605 -1.09 -0.00068 0/0 0 0 4994085.5 HCD 30 MS2 13.45059 680.3 110 49.0595 13121 13121 13111 QEplus033719.raw F4 766.8 475.1 723.7 569.1 807.9 738.9 173 2.91 1 FALSE 1.14E-05 0.0001093 0.85 -250 53200 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQAELEAAR [K].eQAELEAAR.[Q] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5044 0 1 1 1 623.33624 1245.66521 1245.66365 1.25 0.00078 0/0 0 0 121373384 HCD 30 MS2 31.69239 751.3 12.257 49.0668 13123 13123 13122 QEplus033719.raw F4 846.5 660.8 712.4 546.1 1098.8 643.1 246 3.43 2 FALSE 1.14E-05 7.30E-06 1.073 -250 53215 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEVAESK [R].aEVAESk.[C] N-Term(TMT6plex); K7(TMT6plex) 3 P58774 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1 Q9D1R6; P58774; Q61344 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1 0 2 2 0.248 0 1 1 1 596.35364 1191.7 1191.69852 1.24 0.00074 0/0 0 0 42965408 HCD 30 MS2 21.91197 1079.9 45.057 49.0736 13126 13126 13122 QEplus033719.raw F4 2278.7 342.2 995.1 860.9 429.3 1573.2 466 2.5 1 FALSE 0.0005556 0.008535 0.429 -250 53222 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTTIAR [R].vTTIAR.[N] N-Term(TMT6plex) 9 E9Q1S3; Q3TYS4 Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23a PE=1 SV=1;Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1 E9Q1S3; Q8C1E4; Q3TYS4; Q3TAW4; Q8CDS4; Q3TIS3; Q01405; Q9D662; Q3UKB4 Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23a PE=1 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23a PE=2 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1; Protein transport protein Sec23A OS=Mus musculus OX=10090 GN=Sec23a PE=1 SV=2; Protein transport protein Sec23B OS=Mus musculus OX=10090 GN=Sec23b PE=1 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1 0 2 2 0.1944 0 1 1 1 445.28894 889.5706 889.56683 4.24 0.00189 0/0 0 0 37427648 HCD 30 MS2 49.88612 611.3 16.726 49.0759 13127 13127 13122 QEplus033719.raw F4 532.4 588 709.4 443.3 736.7 657.9 57 2.16 2 FALSE 0.005397 0.09211 0.028 -250 53232 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVENSEDPK [R].eVENSEDPk.[F] N-Term(TMT6plex); K9(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 3 3 0.2212 0 1 1 1 502.26855 1504.79111 1504.78952 1.05 0.00053 0/0 0 0 31233826 HCD 30 MS2 32.67785 667.4 42.368 49.0781 13128 13128 13122 QEplus033719.raw F4 692 596.5 699.7 587.5 724.5 704 283 3.21 1 FALSE 3.35E-05 0.001131 0.651 -250 53238 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IEYARPTR [K].iEYARPTR.[L] N-Term(TMT6plex) 5 Q921F4 Heterogeneous nuclear ribonucleoprotein L-like OS=Mus musculus OX=10090 GN=Hnrnpll PE=1 SV=3 Q921F4; Q921F4-4; V9GXB6; Q9CSH0; Q3TBR4 Heterogeneous nuclear ribonucleoprotein L-like OS=Mus musculus OX=10090 GN=Hnrnpll PE=1 SV=3; Isoform 2 of Heterogeneous nuclear ribonucleoprotein L-like OS=Mus musculus OX=10090 GN=Hnrnpll; Heterogeneous nuclear ribonucleoprotein L-like OS=Mus musculus OX=10090 GN=Hnrnpll PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpll PE=2 SV=1; RRM_8 domain-containing protein OS=Mus musculus OX=10090 GN=Hnrnpll PE=2 SV=1 0 3 3 0.4983 0 1 1 1 412.24188 1234.71109 1234.71054 0.45 0.00019 0/0 0 0 29642230 HCD 30 MS2 23.78812 486 35.656 49.0804 13129 13129 13122 QEplus033719.raw F4 522.3 460.2 524.5 376.7 562.4 470.1 549 3.01 1 FALSE 0.0005174 0.00808 0.438 -250 53245 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQYYVR [K].eQYYVR.[K] N-Term(TMT6plex) 5 Q921C5 Protein bicaudal D homolog 2 OS=Mus musculus OX=10090 GN=Bicd2 PE=1 SV=1 Q921C5-2; Q3TBD4; D3Z390; Q921C5-3; Q921C5 Isoform 2 of Protein bicaudal D homolog 2 OS=Mus musculus OX=10090 GN=Bicd2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Bicd2 PE=2 SV=1; Protein bicaudal D homolog 2 OS=Mus musculus OX=10090 GN=Bicd2 PE=1 SV=2; Isoform 3 of Protein bicaudal D homolog 2 OS=Mus musculus OX=10090 GN=Bicd2; Protein bicaudal D homolog 2 OS=Mus musculus OX=10090 GN=Bicd2 PE=1 SV=1 0 2 2 0.5246 0 1 1 1 543.79114 1086.575 1086.57813 -2.88 -0.00156 0/0 0 0 9410266 HCD 30 MS2 37.79089 952 110 49.0829 13130 13130 13122 QEplus033719.raw F4 1050.7 730.2 1149.3 820.1 920.1 1041.6 144 1.83 1 FALSE 0.004382 0.0793 0.063 -250 53248 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AERPDVDEK [K].aERPDVDEk.[R] N-Term(TMT6plex); K9(TMT6plex) 2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q80U36; Q9JHU4 MKIAA0325 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 2 2 0.4472 0 1 1 1 758.92358 1516.83989 1516.83714 1.81 0.00137 0/0 0 0 4684715.5 HCD 30 MS2 48.49974 299.6 110 49.0854 13131 13131 13122 QEplus033719.raw F4 283.9 222.9 311.9 270 343.6 365.6 359 1.99 1 FALSE 0.0002218 0.004639 0.51 -250 53253 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AASGEAKPQAK [K].aASGEAkPQAk.[K] N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex) 2 P15864 Histone H1.2 OS=Mus musculus OX=10090 GN=H1-2 PE=1 SV=2 Q3UXH2; P15864 H15 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=H1f2 PE=2 SV=1; Histone H1.2 OS=Mus musculus OX=10090 GN=H1-2 PE=1 SV=2 0 3 3 0.6085 0 1 1 1 582.35626 1745.05423 1745.05244 1.03 0.0006 0/0 0 0 29742934 HCD 30 MS2 31.66643 1183.9 49.738 49.0877 13132 13132 13122 QEplus033719.raw F4 2201.1 885.6 1423.5 855.2 697.3 1040.5 307 2.58 1 FALSE 1.14E-05 4.97E-06 1.105 -250 53268 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHVIDGEK [K].qHVIDGEk.[T] N-Term(TMT6plex); K8(TMT6plex) 4 Q3TGU7 Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=1 Q3TGU7; Q05BN2; P50580-2; Q3UMW2 Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=1; Pa2g4 protein (Fragment) OS=Mus musculus OX=10090 GN=Pa2g4 PE=2 SV=1; Isoform 2 of Proliferation-associated protein 2G4 OS=Mus musculus OX=10090 GN=Pa2g4; Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=2 SV=1 0 2 2 0.4509 0 1 1 1 692.40363 1383.79997 1383.79963 0.25 0.00017 0/0 0 0 15433283 HCD 30 MS2 10.07721 723.4 110 49.0975 13135 13135 13133 QEplus033719.raw F4 896.7 539.4 686.6 634.1 909.2 674.3 309 3.26 1 FALSE 1.14E-05 0.0001358 0.832 -250 53277 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAPATGGVK [K].sAPATGGVk.[K] N-Term(TMT6plex); K9(TMT6plex) 5 A1L0V4 Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 A1L0V4; P68433; B9EI85; A1L0U3; A0A1W2P768 Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 0 2 2 0.5196 0 1 1 1 623.38226 1245.75725 1245.75671 0.44 0.00027 0/0 0 0 98286656 HCD 30 MS2 50.22371 922.2 13.007 49.0998 13136 13136 13133 QEplus033719.raw F4 1070.7 827.4 801.8 565.8 1621.5 646.3 586 2.81 1 FALSE 1.14E-05 4.72E-06 1.109 -250 53296 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AACYTK [R].aAcYTk.[L] N-Term(TMT6plex); C3(Carbamidomethyl); K6(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 2 2 0.312 0 1 1 1 586.33167 1171.65605 1171.65455 1.28 0.00075 0/0 0 0 22063496 HCD 30 MS2 6.443021 1623.8 110 49.1045 13138 13138 13133 QEplus033719.raw F4 1690.8 1381.4 2314.6 1408.6 1195.9 1751.2 234 2.5 1 FALSE 0.004214 0.07717 0.069 -250 53302 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAMENEMR [R].dAMENEMR.[T] N-Term(TMT6plex) 13 Q8CAQ8; A0A0U1RP81 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1;MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q3U7N2; Q6P8Y5; Q8CAQ8; E9QAY6; Q8CAQ8-2; A0A0U1RP81; Q3TVZ5; Q2YDW0; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1 0 2 2 0.7905 0 1 1 1 612.78217 1224.55705 1224.55502 1.66 0.00102 0/0 0 0 19342950 HCD 30 MS2 59.17411 753.7 48.144 49.1068 13139 13139 13133 QEplus033719.raw F4 725.2 547.4 896.3 784.4 708.1 861 26 2.96 2 FALSE 0.0002218 0.004688 0.509 -250 53309 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDYDGIGGR [R].gDYDGIGGR.[G] N-Term(TMT6plex) 3 B9EKE9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1 B9EKE9; B7ZWF1; Q3TQX5 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=1 0 2 2 0.6729 0 1 1 1 569.78833 1138.56938 1138.56902 0.32 0.00018 0/0 0 0 13392778 HCD 30 MS2 71.7802 686.5 30.17 49.1091 13140 13140 13133 QEplus033719.raw F4 716.7 500.9 707.8 758.7 606.9 827.8 95 2.66 1 FALSE 1.14E-05 0.0002427 0.783 -250 53316 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSSEPDVAYR [R].sSSEPDVAYR.[V] N-Term(TMT6plex) 2 B1AWB9; O88207-2 "Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1;Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1" B1AWB9; O88207-2 "Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1; Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1" 0 2 2 0.6453 0 1 1 1 670.33899 1339.6707 1339.66913 1.18 0.00079 0/0 0 0 12151407 HCD 30 MS2 23.3611 603.8 110 49.1116 13141 13141 13133 QEplus033719.raw F4 597.4 500.4 674.1 498.2 707.3 645.4 136 3.44 2 FALSE 1.14E-05 1.51E-06 1.203 -250 53324 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CASQSGMTAYGTR [K].cASQSGMTAYGTR.[R] N-Term(TMT6plex); C1(Carbamidomethyl) 3 Q543F3 Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1 Q922F8; Q543F3; D3Z7R6 Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1 0 2 2 0.0389 0 1 1 1 809.87988 1618.75249 1618.75149 0.62 0.0005 0/0 0 0 9878824 HCD 30 MS2 41.58447 518.2 110 49.1141 13142 13142 13133 QEplus033719.raw F4 463.7 567.1 620.8 319.7 702.3 435.7 44 4.37 1 FALSE 1.14E-05 2.84E-10 1.911 -250 53332 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAHNLVK [R].aAHNLVk.[R] N-Term(TMT6plex); K7(TMT6plex) 7 P47857 "ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=3" Q1LZL7; P47857-3; P47857; Q99K08; A0A2R8VHA5; P47857-2; A0A2R8VHV2 "6-phosphofructokinase (Fragment) OS=Mus musculus OX=10090 GN=Pfkm PE=2 SV=1; Isoform 3 of ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm; ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=3; ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkm PE=2 SV=1; ATP-dependent 6-phosphofructokinase, muscle type (Fragment) OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=1; Isoform 2 of ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm; ATP-dependent 6-phosphofructokinase, muscle type (Fragment) OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=1" 0 2 2 0.5327 0 1 1 1 605.88806 1210.76885 1210.76721 1.35 0.00082 0/0 0 0 8064082 HCD 30 MS2 30.92355 977 110 49.1166 13143 13143 13133 QEplus033719.raw F4 1816.5 441.9 741.3 1364.7 572.3 925.1 124 3.06 1 FALSE 0.0002218 0.004553 0.512 -250 53339 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMDEEDK [K].eMDEEDk.[A] N-Term(TMT6plex); K7(TMT6plex) 1 Q8K003 Translation machinery-associated protein 7 OS=Mus musculus OX=10090 GN=Tma7 PE=3 SV=1 Q8K003 Translation machinery-associated protein 7 OS=Mus musculus OX=10090 GN=Tma7 PE=3 SV=1 0 2 2 0.7115 0 1 1 1 677.33423 1353.66118 1353.66082 0.27 0.00018 0/0 0 0 12998913 HCD 30 MS2 0 841 110 49.1239 13145 13145 13144 QEplus033719.raw F4 931 768.4 921.2 570.4 1160.4 694.6 110 2.53 1 FALSE 0.001368 0.01949 0.286 -250 53360 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQQMVMR [K].eQQMVMR.[G] N-Term(TMT6plex) 5 P61620 Protein transport protein Sec61 subunit alpha isoform 1 OS=Mus musculus OX=10090 GN=Sec61a1 PE=1 SV=2 A0A0A6YVQ7; P61620; Q9CYJ6; Q9JLR1; Q3TJD0 Protein transport protein Sec61 subunit alpha isoform 2 (Fragment) OS=Mus musculus OX=10090 GN=Sec61a2 PE=1 SV=1; Protein transport protein Sec61 subunit alpha isoform 1 OS=Mus musculus OX=10090 GN=Sec61a1 PE=1 SV=2; Protein transport protein Sec61 subunit alpha isoform 2 OS=Mus musculus OX=10090 GN=Sec61a2 PE=1 SV=1; Protein transport protein Sec61 subunit alpha isoform 2 OS=Mus musculus OX=10090 GN=Sec61a2 PE=2 SV=3; Plug_translocon domain-containing protein OS=Mus musculus OX=10090 GN=Sec61a1 PE=2 SV=1 0 2 2 0.4766 0 1 1 1 575.79993 1150.59258 1150.59102 1.36 0.00078 0/0 0 0 61526624 HCD 30 MS2 42.17624 806.1 16.718 49.133 13149 13149 13144 QEplus033719.raw F4 1293.8 642.7 813.2 589.5 731.6 765.6 181 2.35 1 FALSE 0.001028 0.01343 0.353 -250 53389 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAATEVK [K].eAATEVk.[V] N-Term(TMT6plex); K7(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.3506 0 1 1 1 603.36017 1205.71306 1205.71417 -0.92 -0.00056 0/0 0 0 14528036 HCD 30 MS2 23.15429 1381 110 49.1422 13153 13153 13144 QEplus033719.raw F4 2391.1 721.2 1537.4 1330.4 880.2 1425.8 320 2.31 1 FALSE 0.0008718 0.01189 0.375 -250 53396 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YAECGLR [R].yAEcGLR.[I] N-Term(TMT6plex); C4(Carbamidomethyl) 6 O70325 Phospholipid hydroperoxide glutathione peroxidase OS=Mus musculus OX=10090 GN=Gpx4 PE=1 SV=4 O70325; S4R1E5; O70325-3; Q5XJZ8; Q3TIF2; Q3TI34 Phospholipid hydroperoxide glutathione peroxidase OS=Mus musculus OX=10090 GN=Gpx4 PE=1 SV=4; Glutathione peroxidase OS=Mus musculus OX=10090 GN=Gpx4 PE=1 SV=1; Isoform Nuclear of Phospholipid hydroperoxide glutathione peroxidase OS=Mus musculus OX=10090 GN=Gpx4; Glutathione peroxidase (Fragment) OS=Mus musculus OX=10090 GN=Gpx4 PE=2 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Gpx4 PE=2 SV=2; Glutathione peroxidase OS=Mus musculus OX=10090 GN=Gpx4 PE=2 SV=2 0 2 2 0.527 0 1 1 1 549.28497 1097.56267 1097.5611 1.43 0.00079 0/0 0 0 13694071 HCD 30 MS2 20.33521 898.1 109.017 49.1447 13154 13154 13144 QEplus033719.raw F4 873.9 784.9 962.5 840.6 948 978.6 109 2.41 1 FALSE 0.00079 0.01109 0.387 -250 53406 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRCTLAEK [K].dRcTLAEk.[L] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 3 P18760 Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3 Q9CX22; P18760; F8WGL3 "Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=2 SV=1; Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1" 1 3 3 0.5457 0 1 1 1 484.2757 1450.81253 1450.80882 2.56 0.00124 0/0 0 0 36169800 HCD 30 MS2 33.81454 911.9 31.189 49.152 13156 13156 13155 QEplus033719.raw F4 1072.7 880.2 1024.5 574.9 1038.3 880.7 369 3.5 1 FALSE 1.14E-05 8.79E-06 1.058 -250 53411 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTQMETEK [K].qTQMETEk.[L] N-Term(TMT6plex); K8(TMT6plex) 3 Q8K411 "Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1 PE=1 SV=1" Q8K411-2; Q8K411-3; Q8K411 "Isoform 2 of Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1; Isoform 3 of Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1; Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1 PE=1 SV=1" 0 2 2 0.3626 0 1 1 1 726.89874 1452.79021 1452.77685 9.19 0.00668 0/0 0 0 4413507 HCD 30 MS2 20.65389 500.9 110 49.1545 13157 13157 13155 QEplus033719.raw F4 491.1 350 550.7 435.1 641.7 536.7 341 2.62 1 FALSE 0.001222 0.01649 0.315 -250 53420 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVAVTR [K].vVAVTR.[T] N-Term(TMT6plex) 2 Q542P5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Cbr2 PE=1 SV=1 Q542P5; F6YNX9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Cbr2 PE=1 SV=1; Carbonyl reductase [NADPH] 2 (Fragment) OS=Mus musculus OX=10090 GN=Cbr2 PE=1 SV=1 0 2 2 0.2474 0 1 1 1 437.29001 873.57274 873.57192 0.94 0.00041 0/0 0 0 122794760 HCD 30 MS2 47.32648 620.8 6.509 49.1568 13158 13158 13155 QEplus033719.raw F4 608.9 566.1 758.4 502.4 551.7 737.1 60 1.94 1 FALSE 0.005324 0.09111 0.031 -250 53440 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTFPDAR [K].gTFPDAR.[E] N-Term(TMT6plex) 6 Q3TMM5; Q3UM20 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1 Q3TMM5; Q3TTV7; Q3TFC2; Q3UM20; Q3TF40; Q99K48 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Non-POU domain-containing octamer-binding protein OS=Mus musculus OX=10090 GN=Nono PE=1 SV=3 0 2 2 0.598 0 1 1 1 496.77252 992.53777 992.53626 1.52 0.00075 0/0 0 0 55989404 HCD 30 MS2 34.27917 983 20.54 49.1636 13161 13161 13155 QEplus033719.raw F4 1423.2 835.8 998.9 634 1013.5 992.9 239 1.99 2 FALSE 0.002056 0.03652 0.188 -250 53446 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERDVILR [K].eRDVILR.[E] N-Term(TMT6plex) 5 Q9CZ13 "Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrc1 PE=1 SV=2" Q3THM1; Q8K2S8; Q9CZ13; A0A0A6YW82; Q3TIC8 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Uqcrc1 PE=2 SV=1; Uqcrc1 protein OS=Mus musculus OX=10090 GN=Uqcrc1 PE=2 SV=1; Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrc1 PE=1 SV=2; Cytochrome b-c1 complex subunit 1, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Uqcrc1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Uqcrc1 PE=2 SV=1" 1 3 3 0.2569 0 1 1 1 377.23511 1129.69077 1129.68907 1.5 0.00057 0/0 0 0 27748084 HCD 30 MS2 27.21016 516.9 37.646 49.1658 13162 13162 13155 QEplus033719.raw F4 545.4 391.7 559.7 529.6 445 630.1 199 2.88 1 FALSE 5.44E-05 0.002175 0.59 -250 53453 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDAIYSAR [R].sDAIYSAR.[Y] N-Term(TMT6plex) 3 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 Q3U454; A0A0R4J0I9; Q91ZX7 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lrp1 PE=2 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 0 2 2 0.7406 0 1 1 1 556.30206 1111.59685 1111.5945 2.11 0.00117 0/0 0 0 24932294 HCD 30 MS2 4.261601 747.3 70.356 49.1681 13163 13163 13155 QEplus033719.raw F4 720.3 712.3 845.6 595.6 839.3 770.5 124 2.66 1 FALSE 1.14E-05 0.0002579 0.778 -250 53460 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQVSIEEGERK [K].rQVSIEEGERk.[A] N-Term(TMT6plex); K11(TMT6plex) 3 Q0PD54 Rab6A OS=Mus musculus OX=10090 GN=Rab6a PE=2 SV=1 P35279-2; D3YV69; Q0PD54 Isoform 2 of Ras-related protein Rab-6A OS=Mus musculus OX=10090 GN=Rab6a; Ras-related protein Rab-6A OS=Mus musculus OX=10090 GN=Rab6a PE=1 SV=1; Rab6A OS=Mus musculus OX=10090 GN=Rab6a PE=2 SV=1 2 4 4 0.5644 0 1 1 1 448.01416 1789.03481 1789.03322 0.89 0.0004 0/0 0 0 14292314 HCD 30 MS2 28.46288 568.5 46.233 49.1703 13164 13164 13155 QEplus033719.raw F4 596.1 455.3 638 491.2 563.3 667.4 474 3.03 1 FALSE 1.14E-05 3.79E-08 1.507 -250 53468 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQEAKHDEL [K].dQEAkHDEL.[-] N-Term(TMT6plex); K5(TMT6plex) 1 Q9Z247 Peptidyl-prolyl cis-trans isomerase FKBP9 OS=Mus musculus OX=10090 GN=Fkbp9 PE=1 SV=1 Q9Z247 Peptidyl-prolyl cis-trans isomerase FKBP9 OS=Mus musculus OX=10090 GN=Fkbp9 PE=1 SV=1 1 3 3 0.4274 0 1 1 1 514.94415 1542.81791 1542.81641 0.97 0.0005 0/0 0 0 19988472 HCD 30 MS2 29.60424 830.8 73.147 49.1726 13165 13165 13155 QEplus033719.raw F4 1051.6 602.5 873.4 727.3 859.8 870.3 300 2.41 1 FALSE 0.001387 0.01965 0.284 -250 53477 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQIIGEGR [R].gQIIGEGR.[S] N-Term(TMT6plex) 2 Q99N87 "28S ribosomal protein S5, mitochondrial OS=Mus musculus OX=10090 GN=Mrps5 PE=1 SV=1" B2FDG7; Q99N87 "28S ribosomal protein S5, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Mrps5 PE=1 SV=1; 28S ribosomal protein S5, mitochondrial OS=Mus musculus OX=10090 GN=Mrps5 PE=1 SV=1" 0 2 2 0.4336 0 1 1 1 529.81219 1058.61711 1058.61557 1.45 0.00077 0/0 0 0 15841311 HCD 30 MS2 30.04019 1108.3 96.053 49.1799 13167 13167 13166 QEplus033719.raw F4 1194.3 851.4 1139.7 1001.2 1114.3 1348.9 310 2.86 1 FALSE 1.14E-05 0.0008987 0.672 -250 53486 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGVEIER [K].dGVEIER.[R] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.0963 0 1 1 1 523.78918 1046.57109 1046.56795 3 0.00157 0/0 0 0 15603407 HCD 30 MS2 46.54219 1195 110 49.1824 13168 13168 13166 QEplus033719.raw F4 1545.8 629.1 977.8 1654.6 774.2 1588.5 323 2.18 2 FALSE 0.006593 0.105 -0.007 -250 53493 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAGTDDSTLVR [K].gAGTDDSTLVR.[I] N-Term(TMT6plex) 6 Q922A2 Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1 Q922A2; Q3UYL7; Q07076; Q3TJ49; A0A2C9F2D2; Q8BP75 Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1; Annexin A7 OS=Mus musculus OX=10090 GN=Anxa7 PE=1 SV=2; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa7 PE=2 SV=1 0 2 2 0.5284 0 1 1 1 660.85266 1320.69805 1320.69567 1.8 0.00119 0/0 0 0 39976808 HCD 30 MS2 21.05405 745.1 53.699 49.1847 13169 13169 13166 QEplus033719.raw F4 793.4 628.7 758.4 731.1 779.9 779.2 270 4.05 1 FALSE 1.14E-05 1.90E-09 1.754 -250 53502 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHFTAER [K].vHFTAER.[S] N-Term(TMT6plex) 4 Q78PY7 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 Q78PY7; Q3UZI3; Q3TW51; Q3TRW3 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1 0 3 3 0.2896 0 1 1 1 363.54016 1088.60593 1088.60501 0.85 0.00031 0/0 0 0 37277804 HCD 30 MS2 46.37329 465.2 23.679 49.1869 13170 13170 13166 QEplus033719.raw F4 857.4 311.2 496.2 394 396 336.2 319 2.21 1 FALSE 0.005357 0.09154 0.03 -250 53517 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAAEEALR [K].tAAEEALR.[R] N-Term(TMT6plex) 5 F8VQJ3 Laminin subunit gamma-1 OS=Mus musculus OX=10090 GN=Lamc1 PE=1 SV=1 Q3TRH4; Q3UFZ9; F8VQJ3; Q3URV4; P02468 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lamc1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lamc1 PE=2 SV=1; Laminin subunit gamma-1 OS=Mus musculus OX=10090 GN=Lamc1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lamc1 PE=2 SV=1; Laminin subunit gamma-1 OS=Mus musculus OX=10090 GN=Lamc1 PE=1 SV=2 0 2 2 0.3245 0 1 1 1 545.3092 1089.61113 1089.61015 0.9 0.00049 0/0 0 0 20055176 HCD 30 MS2 30.47004 1343.3 110 49.1917 13172 13172 13166 QEplus033719.raw F4 1854.4 1047.5 1386.1 1200.7 1288 1283.3 325 2.65 1 FALSE 1.14E-05 0.0008092 0.681 -250 53535 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPSSDVEK [R].gPSSDVEk.[A] N-Term(TMT6plex); K8(TMT6plex) 4 Q8VDJ3 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1 Q8VDJ3; A0PJE9; A0A087WP83; Q3V1M8 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Hdlbp protein (Fragment) OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1; Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1 0 2 2 0.3597 0 1 1 1 638.86206 1276.71684 1276.7149 1.52 0.00097 0/0 0 0 12828452 HCD 30 MS2 30.16239 778 110 49.1965 13174 13174 13166 QEplus033719.raw F4 796.5 603 830 693.4 1018 726.9 383 2.78 1 FALSE 1.14E-05 0.0001526 0.822 -250 53547 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TCGQICSGAPGEQDSR [R].tcGQIcSGAPGEQDSR.[V] N-Term(TMT6plex); C2(Carbamidomethyl); C6(Carbamidomethyl) 4 Q99K41 EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1 Q3UUU0; Q99K41; Q3U254; Q3USG5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; C1q domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1 0 3 3 0.8173 0 1 1 1 651.29865 1951.88138 1951.87994 0.74 0.00048 0/0 0 0 7147860.5 HCD 30 MS2 3.983136 214.8 110 49.2015 13176 13176 13166 QEplus033719.raw F4 218.1 194.6 261 229.5 203.2 182.2 28 4.98 1 FALSE 1.14E-05 4.34E-11 2.066 -250 53558 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCSETQYESK [K].ncSETQYESk.[V] N-Term(TMT6plex); C2(Carbamidomethyl); K10(TMT6plex) 1 A8IP69 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 A8IP69 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 0 2 2 0.8899 0 1 1 1 852.41974 1703.8322 1703.83107 0.66 0.00056 0/0 0 0 15740066 HCD 30 MS2 5.987725 771.4 110 49.2114 13179 13179 13177 QEplus033719.raw F4 850.1 627.8 847.1 763.3 722.1 818.1 108 4.54 1 FALSE 1.14E-05 9.96E-08 1.428 -250 53582 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAGLAVR [R].dAGLAVR.[D] N-Term(TMT6plex) 2 Q9CWJ9 Bifunctional purine biosynthesis protein ATIC OS=Mus musculus OX=10090 GN=Atic PE=1 SV=2 Q9CWJ9; B0LAC5 Bifunctional purine biosynthesis protein ATIC OS=Mus musculus OX=10090 GN=Atic PE=1 SV=2; AICAR transformylase/inosine monophosphate cyclohydrolase (Fragment) OS=Mus musculus OX=10090 GN=Atic PE=2 SV=1 0 2 2 0.2974 0 1 1 1 465.78247 930.55766 930.557 0.72 0.00033 0/0 0 0 82256768 HCD 30 MS2 3.965944 615.1 14.695 49.2181 13182 13182 13177 QEplus033719.raw F4 649.1 524.6 651.7 514.7 692.1 658.3 199 1.95 1 FALSE 0.001506 0.0221 0.264 -250 53592 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YKAEDEVQR [R].ykAEDEVQR.[D] N-Term(TMT6plex); K2(TMT6plex) 6 P17879 Heat shock 70 kDa protein 1B OS=Mus musculus OX=10090 GN=Hspa1b PE=1 SV=3 O88688; Q61696; Q3TAI8; A1E2B8; P17879; Q61698 Heat shock protein 70 (Fragment) OS=Mus musculus OX=10090 GN=Hsp70.3 PE=3 SV=1; Heat shock 70 kDa protein 1A OS=Mus musculus OX=10090 GN=Hspa1a PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Inducible heat shock protein 70 OS=Mus musculus OX=10090 PE=3 SV=1; Heat shock 70 kDa protein 1B OS=Mus musculus OX=10090 GN=Hspa1b PE=1 SV=3; Heat shock protein (hsp68) (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 1 3 3 0.5799 0 1 1 1 532.63232 1595.88242 1595.87934 1.93 0.00103 0/0 0 0 26074056 HCD 30 MS2 34.6185 1072 59.492 49.2226 13184 13184 13177 QEplus033719.raw F4 1108.4 1111.8 1194.1 737.4 1319.7 960.3 385 2.88 1 FALSE 1.14E-05 0.0006166 0.704 -250 53598 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCSETQYESK [K].ncSETQYESk.[V] N-Term(TMT6plex); C2(Carbamidomethyl); K10(TMT6plex) 1 A8IP69 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 A8IP69 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 0 3 3 0.7595 0 1 1 1 568.61615 1703.8339 1703.83107 1.66 0.00094 0/0 0 0 25332564 HCD 30 MS2 30.23479 971.5 81.335 49.2249 13185 13185 13177 QEplus033719.raw F4 1112.4 755.6 1065.3 969.3 902.1 1024.3 109 4.2 1 FALSE 1.14E-05 8.59E-06 1.06 -250 53604 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERDVILR [K].eRDVILR.[E] N-Term(TMT6plex) 5 Q9CZ13 "Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrc1 PE=1 SV=2" Q3THM1; Q8K2S8; Q9CZ13; A0A0A6YW82; Q3TIC8 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Uqcrc1 PE=2 SV=1; Uqcrc1 protein OS=Mus musculus OX=10090 GN=Uqcrc1 PE=2 SV=1; Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrc1 PE=1 SV=2; Cytochrome b-c1 complex subunit 1, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Uqcrc1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Uqcrc1 PE=2 SV=1" 1 2 2 0.2059 0 1 1 1 565.349 1129.69072 1129.68907 1.46 0.00082 0/0 0 0 18967438 HCD 30 MS2 35.17599 855.1 110 49.2274 13186 13186 13177 QEplus033719.raw F4 924.1 717.2 922.4 768.3 885.8 912.9 199 2.38 1 FALSE 0.0008268 0.01136 0.383 -250 53611 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CASQSGMTAYGTR [K].cASQSGMTAYGTR.[R] N-Term(TMT6plex); C1(Carbamidomethyl) 3 Q543F3 Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1 Q922F8; Q543F3; D3Z7R6 Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1 0 3 3 0.2294 0 1 1 1 540.25629 1618.75431 1618.75149 1.74 0.00094 0/0 0 0 15742761 HCD 30 MS2 47.94456 758.6 52.083 49.2297 13187 13187 13177 QEplus033719.raw F4 1042.7 644.2 808.7 523.7 846.2 685.9 54 4.49 1 FALSE 1.14E-05 1.17E-06 1.225 -250 53626 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPPVSVNR [K].sPPVSVNR.[N] N-Term(TMT6plex) 9 O08784 Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 Q3TBZ3; H3BIX0; Q05BH6; F6R3V4; O08784; Q7TPZ2; Q3TAB2; Q6PFZ6; H3BL37 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Tcof1 protein OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 0 2 2 0.367 0 1 1 1 542.81927 1084.63127 1084.63122 0.05 0.00002 0/0 0 0 13730076 HCD 30 MS2 0 803.2 110 49.2395 13190 13190 13188 QEplus033719.raw F4 836.9 717.4 877.1 669.3 893.6 825.1 105 2.18 1 FALSE 0.00131 0.01786 0.301 -250 53632 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAPFDSR [K].tAPFDSR.[F] N-Term(TMT6plex) 1 P56391 Cytochrome c oxidase subunit 6B1 OS=Mus musculus OX=10090 GN=Cox6b1 PE=1 SV=2 P56391 Cytochrome c oxidase subunit 6B1 OS=Mus musculus OX=10090 GN=Cox6b1 PE=1 SV=2 0 2 2 0.4656 0 1 1 1 511.77762 1022.54796 1022.54683 1.11 0.00057 0/0 0 0 104789776 HCD 30 MS2 27.16015 609.7 10.623 49.2417 13191 13191 13188 QEplus033719.raw F4 672.3 426.7 623.6 653.4 545.9 736.5 157 2.47 1 FALSE 0.001421 0.02047 0.277 -250 53638 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLKDEMAR [R].hLkDEMAR.[H] N-Term(TMT6plex); K3(TMT6plex) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 1 4 4 0.6909 0 1 1 1 365.21317 1457.83083 1457.82989 0.65 0.00024 0/0 0 0 75766904 HCD 30 MS2 8.105969 403.2 11.324 49.244 13192 13192 13188 QEplus033719.raw F4 460.5 175.7 397.4 645.7 183.2 556.9 331 3.17 1 FALSE 5.44E-05 0.002151 0.591 -250 53655 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNVVNTMR [R].nNVVNTMR.[L] N-Term(TMT6plex) 2 Q9WUB3 "Glycogen phosphorylase, muscle form OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=3" E9PUM3; Q9WUB3 "Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=1; Glycogen phosphorylase, muscle form OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=3" 0 2 2 0.6774 0 1 1 1 588.82233 1176.63738 1176.63566 1.46 0.00086 0/0 0 0 22026942 HCD 30 MS2 41.51417 822.4 36.43 49.2485 13194 13194 13188 QEplus033719.raw F4 953.8 393.4 716.5 1142 595.9 1132.5 268 2.79 1 FALSE 3.35E-05 0.001396 0.632 -250 53669 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASNEDGDIK [R].aSNEDGDIk.[R] N-Term(TMT6plex); K9(TMT6plex) 2 Q9Z1F9 SUMO-activating enzyme subunit 2 OS=Mus musculus OX=10090 GN=Uba2 PE=1 SV=1 Q9Z1F9; H3BLR3 SUMO-activating enzyme subunit 2 OS=Mus musculus OX=10090 GN=Uba2 PE=1 SV=1; SUMO-activating enzyme subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Uba2 PE=1 SV=1 0 2 2 0.6246 0 1 1 1 703.88092 1406.75456 1406.75274 1.29 0.00091 0/0 0 0 13073676 HCD 30 MS2 17.7088 676.7 110 49.2533 13196 13196 13188 QEplus033719.raw F4 742.1 635.6 658.7 461.7 1034.9 527.3 318 3.25 1 FALSE 1.14E-05 2.43E-06 1.164 -250 53673 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVLQESER [R].eVLQESER.[S] N-Term(TMT6plex) 1 Q61033 "Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4" Q61033 "Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4" 0 2 2 0.5155 0 1 1 1 609.83112 1218.65495 1218.65275 1.81 0.0011 0/0 0 0 11771095 HCD 30 MS2 39.39241 946.5 110 49.2558 13197 13197 13188 QEplus033719.raw F4 1210.4 839.5 1031.9 707.8 934.1 955.3 283 2.91 1 FALSE 1.14E-05 9.58E-05 0.861 -250 53678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YSGGNYRDNYDN [R].ySGGNYRDNYDN.[-] N-Term(TMT6plex) 2 Q8BG13; O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1;RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 Q8BG13; O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1; RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 1 2 2 0.9365 0 1 1 1 833.86871 1666.73015 1666.72949 0.39 0.00033 0/0 0 0 7826486.5 HCD 30 MS2 0 591.4 110 49.2583 13198 13198 13188 QEplus033719.raw F4 513.7 732.5 661.8 367.8 847.9 424.5 19 2.99 2 FALSE 2.26E-05 0.001046 0.658 -250 53695 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSGEVVQQK [K].nSGEVVQQk.[D] N-Term(TMT6plex); K9(TMT6plex) 10 E9Q3Z5 Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1 Q99KQ8; E9Q3Z5; E3VVQ8; Q7TMJ2; F6R6A4; Q8K4L2; Q8K4L3; Q8K4L3-3; Q3TTX5; A0A1B0GS91 Svil protein (Fragment) OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin muscle-specific isoform OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1; Svil protein (Fragment) OS=Mus musculus OX=10090 GN=Svil PE=2 SV=2; Supervillin (Fragment) OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Archvillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Isoform 2 of Supervillin OS=Mus musculus OX=10090 GN=Svil; HP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1 0 2 2 0.2932 0 1 1 1 723.9209 1446.83452 1446.83166 1.97 0.00143 0/0 0 0 1854646 HCD 30 MS2 70.92735 321.5 110 49.2681 13201 13201 13199 QEplus033719.raw F4 302.3 327.7 329.4 279.6 364.7 325.2 455 2.66 1 FALSE 1.14E-05 8.66E-06 1.059 -250 53704 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDHAGVLK [K].gDHAGVLk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 A0A0G2JDU7; F7BDR1; Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=1; Fascin (Fragment) OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=1; Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 0 3 3 0.6611 0 1 1 1 418.92413 1254.75785 1254.75704 0.64 0.00027 0/0 0 0 62879000 HCD 30 MS2 21.52916 763.2 17.847 49.2704 13202 13202 13199 QEplus033719.raw F4 883.2 647 811.2 491.4 978.2 768 287 3.57 1 FALSE 1.14E-05 0.0005116 0.72 -250 53741 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TCGQICSGAPGEQDSR [R].tcGQIcSGAPGEQDSR.[V] N-Term(TMT6plex); C2(Carbamidomethyl); C6(Carbamidomethyl) 4 Q99K41 EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1 Q3UUU0; Q99K41; Q3U254; Q3USG5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; C1q domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1 0 2 2 0.8617 0 1 1 1 976.44434 1951.8814 1951.87994 0.75 0.00073 0/0 0 0 4867576.5 HCD 30 MS2 0 167.9 110 49.2847 13208 13208 13199 QEplus033719.raw F4 142.6 161.6 219.6 162.9 150.3 170.3 28 5.28 1 FALSE 1.14E-05 6.31E-16 3.245 -250 53748 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDHAGVLK [K].gDHAGVLk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 A0A0G2JDU7; F7BDR1; Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=1; Fascin (Fragment) OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=1; Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 0 2 2 0.5599 0 1 1 1 627.88275 1254.75823 1254.75704 0.94 0.00059 0/0 0 0 5179842 HCD 30 MS2 0 810.5 110 49.2872 13209 13209 13199 QEplus033719.raw F4 822.9 664.4 801.5 690.5 1086.7 796.8 265 2.84 1 FALSE 1.14E-05 0.0001466 0.825 -250 53755 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIEVGR [KR].aIEVGR.[ES] N-Term(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 2 2 0.2652 0 1 1 1 437.27213 873.53697 873.53553 1.65 0.00072 0/0 0 0 156020752 HCD 30 MS2 17.66682 557.7 6.512 49.2945 13211 13211 13210 QEplus033719.raw F4 534.4 452.7 631.9 479.5 581.9 665.6 114 2.3 1 FALSE 0.005838 0.09731 0.014 -250 53756 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALEVGR [KR].aLEVGR.[ES] N-Term(TMT6plex) 1 Q8C865 Uncharacterized protein OS=Mus musculus OX=10090 GN=C130046B21Rik PE=2 SV=1 0 2 2 0.2652 0 1 2 2 437.27213 873.53697 873.53553 1.65 0.00072 0/0 0 0 156020752 HCD 30 MS2 17.66682 557.7 6.512 49.2945 13211 13211 13210 QEplus033719.raw F4 534.4 452.7 631.9 479.5 581.9 665.6 114 2.3 1 FALSE 0.005838 0.09731 0.014 -250 53763 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAAGTTAAAGTGGTTEQPPR [K].eAAGTTAAAGTGGTTEQPPR.[H] N-Term(TMT6plex) 1 Q9Z315 U4/U6.U5 tri-snRNP-associated protein 1 OS=Mus musculus OX=10090 GN=Sart1 PE=1 SV=1 Q9Z315 U4/U6.U5 tri-snRNP-associated protein 1 OS=Mus musculus OX=10090 GN=Sart1 PE=1 SV=1 0 3 3 0.7858 0 1 1 1 691.68732 2073.0474 2073.04099 3.09 0.00214 0/0 0 0 3498027 HCD 30 MS2 9.544997 170.6 110 49.297 13212 13212 13210 QEplus033719.raw F4 189 115.3 182.3 148.3 206.8 181.7 251 5.93 1 FALSE 1.14E-05 3.73E-14 2.648 -250 53767 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLKDEMAR [R].hLkDEMAR.[H] N-Term(TMT6plex); K3(TMT6plex) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 1 3 3 0.4049 0 1 1 1 486.61542 1457.8317 1457.82989 1.24 0.0006 0/0 0 0 130076976 HCD 30 MS2 31.19375 1307.7 14.607 49.2993 13213 13213 13210 QEplus033719.raw F4 1865.9 500 1143.6 2078.6 652.8 1605 327 2.47 1 FALSE 0.001506 0.02249 0.261 -250 53784 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERELEEARK [K].eRELEEARk.[K] N-Term(TMT6plex); K9(TMT6plex) 15 A0A1L1SQ51; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1;Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q68FD6; A0A1L1SRI1; Q80TM2; A0A1L1SQ51; B2RY15; Q9CS79; Q6PB69; Q8CHG4; Q8CDM9; A0A1L1SQP9; Q0V930; Q3UHS6; Q3TBC3; E9PUM4; P26039 Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Tln2 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; MKIAA0320 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 2 4 4 0.2926 0 1 1 1 405.23904 1617.93435 1617.93244 1.18 0.00048 0/0 0 0 33717032 HCD 30 MS2 11.59893 683.5 47.81 49.3038 13215 13215 13210 QEplus033719.raw F4 725.7 622.5 712.6 505.9 869.3 664.8 509 3.11 2 FALSE 5.44E-05 0.001761 0.611 -250 53796 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESLDVSR [K].eSLDVSR.[L] N-Term(TMT6plex) 5 Q3V1T4 Prolyl 3-hydroxylase 1 OS=Mus musculus OX=10090 GN=P3h1 PE=1 SV=2 Q3V1T4; Q3V1T4-2; A2A7Q5; A6PW84; Q3V1T4-3 Prolyl 3-hydroxylase 1 OS=Mus musculus OX=10090 GN=P3h1 PE=1 SV=2; Isoform 2 of Prolyl 3-hydroxylase 1 OS=Mus musculus OX=10090 GN=P3h1; Procollagen-proline 3-dioxygenase OS=Mus musculus OX=10090 GN=P3h1 PE=1 SV=1; Procollagen-proline 3-dioxygenase OS=Mus musculus OX=10090 GN=P3h1 PE=1 SV=1; Isoform 3 of Prolyl 3-hydroxylase 1 OS=Mus musculus OX=10090 GN=P3h1 0 2 2 0.3043 0 1 1 1 517.78815 1034.56902 1034.56795 1.03 0.00053 0/0 0 0 20562968 HCD 30 MS2 32.89268 1113.1 77.52 49.3083 13217 13217 13210 QEplus033719.raw F4 1430.1 877.6 1164 886.8 1110.4 1209.7 191 2.3 1 FALSE 0.0002019 0.004227 0.521 -250 53804 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAAVGTANK [K].aAAVGTANk.[S] N-Term(TMT6plex); K9(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 2 2 0.5719 0 1 1 1 630.88824 1260.76921 1260.76761 1.27 0.0008 0/0 0 0 18376052 HCD 30 MS2 5.431562 1116.9 110 49.3108 13218 13218 13210 QEplus033719.raw F4 1692.4 781.8 1287.3 935.4 849.3 1154.9 510 3.2 1 FALSE 1.14E-05 1.92E-06 1.184 -250 53813 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLKDEMAR [R].hLkDEMAR.[H] N-Term(TMT6plex); K3(TMT6plex) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 1 2 2 0.7113 0 1 1 1 729.41937 1457.83147 1457.82989 1.08 0.00079 0/0 0 0 17819910 HCD 30 MS2 0 557.8 102.919 49.3132 13219 13219 13210 QEplus033719.raw F4 658.7 219.6 571.8 949.9 184.4 762.4 339 2.91 1 FALSE 0.0001504 0.003362 0.546 -250 53823 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVEEQRK [KR].iVEEQRk.[TI] N-Term(TMT6plex); K7(TMT6plex) 4 Q3UL36 Arginine and glutamate-rich protein 1 OS=Mus musculus OX=10090 GN=Arglu1 PE=1 SV=2 Q8BVX8; Q8CIS0; Q8CIS0-2; Q3UL36 Uncharacterized protein OS=Mus musculus OX=10090 GN=Card11 PE=2 SV=1; Caspase recruitment domain-containing protein 11 OS=Mus musculus OX=10090 GN=Card11 PE=1 SV=2; Isoform 2 of Caspase recruitment domain-containing protein 11 OS=Mus musculus OX=10090 GN=Card11; Arginine and glutamate-rich protein 1 OS=Mus musculus OX=10090 GN=Arglu1 PE=1 SV=2 1 3 3 0.251 0 1 1 1 453.95245 1359.84281 1359.83602 4.99 0.00226 0/0 0 0 15744309 HCD 30 MS2 44.23996 697 39.306 49.3155 13220 13220 13210 QEplus033719.raw F4 786.9 538.1 744.5 538.3 834.9 739.2 504 2.43 1 FALSE 0.00124 0.01673 0.313 -250 53831 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRQQLYK [K].dRQQLYk.[L] N-Term(TMT6plex); K7(TMT6plex) 2 Q99LC2 Cleavage stimulation factor subunit 1 OS=Mus musculus OX=10090 GN=Cstf1 PE=1 SV=1 A2APA3; Q99LC2 Cleavage stimulation factor 50 kDa subunit (Fragment) OS=Mus musculus OX=10090 GN=Cstf1 PE=1 SV=1; Cleavage stimulation factor subunit 1 OS=Mus musculus OX=10090 GN=Cstf1 PE=1 SV=1 1 3 3 0.4981 0 1 1 1 470.2822 1408.83203 1408.83127 0.54 0.00026 0/0 0 0 14632066 HCD 30 MS2 14.71051 860.2 102.734 49.3228 13222 13222 13221 QEplus033719.raw F4 935 770.5 946.1 656.7 1027.7 825.5 428 2.63 1 FALSE 1.14E-05 0.0007987 0.682 -250 53836 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGAGPPGPEGGK [R].gGAGPPGPEGGk.[G] N-Term(TMT6plex); K12(TMT6plex) 8 Q7TT32; P04258 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1;SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain" Q7TT32; Q5DTG2; P04258; Q3UH72; Q8BLW4; Q8K173; A0A087WPS3; Q3TVI5 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen alpha-1(III) chain (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 2 2 0.6497 0 1 1 1 719.90704 1438.80681 1438.80545 0.95 0.00068 0/0 0 0 19152990 HCD 30 MS2 0 630.7 94.515 49.3251 13223 13223 13221 QEplus033719.raw F4 516.8 735.3 799.3 336.8 628.8 767.5 392 4.31 2 TRUE 1.14E-05 3.97E-09 1.693 -250 53854 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EREEEFK [K].eREEEFk.[T] N-Term(TMT6plex); K7(TMT6plex) 5 Q8K019 Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=2 Q8K019; A0A087WRN1; F8WI22; Q8K019-2; Q3UDL9 Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=2; Bcl-2-associated transcription factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Isoform 2 of Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1 1 3 3 0.3458 0 1 1 1 475.59811 1424.77979 1424.77857 0.86 0.00041 0/0 0 0 32075840 HCD 30 MS2 12.47084 1533.4 62.148 49.3296 13225 13225 13221 QEplus033719.raw F4 1922.6 1305.2 1487.5 1086.1 1914.5 1484.5 368 2.95 1 FALSE 0.0008183 0.01117 0.386 -250 53858 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGAGPPGPEGGK [R].gGAGPPGPEGGk.[G] N-Term(TMT6plex); K12(TMT6plex) 8 Q7TT32; P04258 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1;SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain" Q7TT32; Q5DTG2; P04258; Q3UH72; Q8BLW4; Q8K173; A0A087WPS3; Q3TVI5 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; SWISS-PROT:P04258 (Bos taurus) Similar to Collagen alpha 1(III) chain; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen alpha-1(III) chain (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 3 3 0.721 0 1 1 1 480.27429 1438.80832 1438.80545 2 0.00096 0/0 0 0 22313934 HCD 30 MS2 3.787695 813 66.069 49.3318 13226 13226 13221 QEplus033719.raw F4 830.3 803.3 934.6 500.2 835.8 973.9 388 4.05 2 TRUE 1.14E-05 8.20E-07 1.254 -250 53867 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YSGGNYRDNYDN [R].ySGGNYRDNYDN.[-] N-Term(TMT6plex) 2 Q8BG13; O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1;RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 Q8BG13; O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1; RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 1 3 3 0.8015 0 1 1 1 556.24866 1666.73142 1666.72949 1.15 0.00064 0/0 0 0 18126896 HCD 30 MS2 22.01398 709 92.506 49.3341 13227 13227 13221 QEplus033719.raw F4 687.7 735.4 793.6 475.2 920.8 641.2 19 4.08 2 FALSE 0.0002518 0.005234 0.496 -250 53899 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQLQCQR [R].mQLQcQR.[Q] N-Term(TMT6plex); C5(Carbamidomethyl) 4 Q80YR5 Scaffold attachment factor B2 OS=Mus musculus OX=10090 GN=Safb2 PE=1 SV=2 F6WIZ2; F6Z0Y5; F6XJ79; Q80YR5 Scaffold attachment factor B2 (Fragment) OS=Mus musculus OX=10090 GN=Safb2 PE=1 SV=1; Scaffold attachment factor B2 (Fragment) OS=Mus musculus OX=10090 GN=Safb2 PE=1 SV=1; Scaffold attachment factor B2 (Fragment) OS=Mus musculus OX=10090 GN=Safb2 PE=1 SV=1; Scaffold attachment factor B2 OS=Mus musculus OX=10090 GN=Safb2 PE=1 SV=2 0 2 2 0.3226 0 1 1 1 596.80878 1192.61028 1192.61281 -2.13 -0.00127 0/0 0 0 4954739.5 HCD 30 MS2 46.77257 725.5 110 49.3441 13231 13231 13221 QEplus033719.raw F4 847.2 561.4 763.7 503.2 793.5 883.8 187 2.17 1 FALSE 0.002628 0.05204 0.136 -250 53910 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPPPPASPGSSDSSAR [R].kPPPPASPGSSDSSAR.[S] N-Term(TMT6plex); K1(TMT6plex) 3 B2RWW1 Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=2 SV=1 B2RWW1; A0A1D5RLY6; Q8C052 Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=2 SV=1; Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=1 SV=1; Microtubule-associated protein 1S OS=Mus musculus OX=10090 GN=Map1s PE=1 SV=2 0 3 3 0.6752 0 1 1 1 666.03412 1996.0878 1996.08637 0.72 0.00048 0/0 0 0 6685503 HCD 30 MS2 0 192.4 110 49.354 13234 13234 13232 QEplus033719.raw F4 190.9 138.5 218.9 195.3 174.6 236.3 467 5.85 1 FALSE 1.14E-05 2.89E-14 2.669 -250 53928 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVCTQPR [R].iVcTQPR.[R] N-Term(TMT6plex); C3(Carbamidomethyl) 3 Q8VHK9 ATP-dependent DNA/RNA helicase DHX36 OS=Mus musculus OX=10090 GN=Dhx36 PE=1 SV=2 A0JLR3; Q8VHK9; B2RQS6 Dhx36 protein (Fragment) OS=Mus musculus OX=10090 GN=Dhx36 PE=2 SV=1; ATP-dependent DNA/RNA helicase DHX36 OS=Mus musculus OX=10090 GN=Dhx36 PE=1 SV=2; RNA helicase OS=Mus musculus OX=10090 GN=Dhx36 PE=2 SV=1 0 2 2 0.4597 0 1 1 1 551.8161 1102.62493 1102.62403 0.81 0.00045 0/0 0 0 13165213 HCD 30 MS2 33.3165 918.8 110 49.361 13237 13237 13232 QEplus033719.raw F4 977.3 806.4 986.1 662.1 1106.6 974.5 393 2.48 1 FALSE 0.0008718 0.01205 0.372 -250 53947 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGPSFEER [R].aGPSFEER.[K] N-Term(TMT6plex) 1 Q921N6 Probable ATP-dependent RNA helicase DDX27 OS=Mus musculus OX=10090 GN=Ddx27 PE=1 SV=3 Q921N6 Probable ATP-dependent RNA helicase DDX27 OS=Mus musculus OX=10090 GN=Ddx27 PE=1 SV=3 0 2 2 0.2283 0 1 1 1 561.29431 1121.58135 1121.57885 2.22 0.00125 0/0 0 0 9813479 HCD 30 MS2 11.07497 670.7 110 49.3657 13239 13239 13232 QEplus033719.raw F4 635.4 570.7 747.9 531.2 770.7 768.1 165 2.54 1 FALSE 0.002696 0.05391 0.131 -250 53959 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGNLTEDDKHNNAK [K].sGNLTEDDkHNNAk.[Y] N-Term(TMT6plex); K9(TMT6plex); K14(TMT6plex) 5 A0A1C7CYV0 Plastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1 Q3UKB1; A0A1C7CYV0; B1AX58; Q3UJG9; Q99K51 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pls3 PE=2 SV=1; Plastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1; Plastin-3 OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pls3 PE=2 SV=1; Plastin-3 OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=3 1 4 4 0.6434 0 1 1 1 558.3053 2230.19936 2230.20308 -1.67 -0.00093 0/0 0 0 5838075.5 HCD 30 MS2 5.706154 466.4 110 49.3707 13241 13241 13232 QEplus033719.raw F4 487.7 448.1 507.6 380.2 515.8 458.9 407 4.15 1 FALSE 1.14E-05 1.91E-06 1.184 -250 53974 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNYNDRYDEIRR [R].tNYNDRYDEIRR.[H] N-Term(TMT6plex) 4 Q58ET1 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=1 SV=1 Q58ET1; Q5EBG5; Q6P1A9; Q80UT7 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=1 SV=1; 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=2 SV=1; 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=2 SV=1; 60S ribosomal protein L7a (Fragment) OS=Mus musculus OX=10090 GN=Rpl7a PE=2 SV=1 2 3 3 0.2492 0 1 1 1 615.31451 1843.92899 1843.92484 2.25 0.00138 0/0 0 0 7553399.5 HCD 30 MS2 13.81243 436.7 110 49.3805 13244 13244 13243 QEplus033719.raw F4 455.6 386.7 521.9 370.4 440.4 445.1 214 3.13 1 FALSE 1.14E-05 6.04E-05 0.899 -250 53980 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSPVASGSTSK [K].tSPVASGSTSk.[S] N-Term(TMT6plex); K11(TMT6plex) 3 Q6A065 Centrosomal protein of 170 kDa OS=Mus musculus OX=10090 GN=Cep170 PE=1 SV=2 A0A0A6YXK7; Q6A065; H7BX26 Centrosomal protein of 170 kDa (Fragment) OS=Mus musculus OX=10090 GN=Cep170 PE=1 SV=1; Centrosomal protein of 170 kDa OS=Mus musculus OX=10090 GN=Cep170 PE=1 SV=2; Centrosomal protein of 170 kDa OS=Mus musculus OX=10090 GN=Cep170 PE=1 SV=1 0 2 2 0.6495 0 1 1 1 740.42517 1479.84307 1479.84189 0.79 0.00059 0/0 0 0 5357564.5 HCD 30 MS2 28.50051 197.6 110 49.3831 13245 13245 13243 QEplus033719.raw F4 190.9 189 210.4 160.4 265.7 169.4 429 3.11 1 FALSE 1.14E-05 1.25E-07 1.409 -250 53987 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VKLDGSR [R].vkLDGSR.[L] N-Term(TMT6plex); K2(TMT6plex) 1 Q4FZE6 40S ribosomal protein S7 OS=Mus musculus OX=10090 GN=Rps7 PE=2 SV=1 Q4FZE6 40S ribosomal protein S7 OS=Mus musculus OX=10090 GN=Rps7 PE=2 SV=1 1 3 3 0.2532 0 1 1 1 411.59619 1232.77402 1232.77269 1.08 0.00044 0/0 0 0 37595152 HCD 30 MS2 9.317807 896.1 33.133 49.3876 13247 13247 13243 QEplus033719.raw F4 682.8 1226.2 1078.2 818.7 763.6 807.4 330 1.58 1 FALSE 0.005048 0.08722 0.042 -250 53996 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILEQQNSSR [R].iLEQQNSSR.[T] N-Term(TMT6plex) 5 E9Q1G8 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2 E9Q1G8; Q8C2A3; E9Q9F5; Q3UNN1; O55131 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin-7 OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=1 0 2 2 0.5096 0 1 1 1 652.36279 1303.71831 1303.71674 1.2 0.00078 0/0 0 0 36878700 HCD 30 MS2 7.559753 538.8 52.272 49.3898 13248 13248 13243 QEplus033719.raw F4 505.7 491.8 580.7 471.6 615.7 567.4 364 3.12 1 FALSE 1.14E-05 2.63E-05 0.968 -250 54006 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANKPGDVVR [K].aNkPGDVVR.[A] N-Term(TMT6plex); K3(TMT6plex) 2 Q9CPY7 Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 PE=1 SV=3 Q9CPY7; Q9CPY7-2 Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 PE=1 SV=3; Isoform 2 of Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 0 3 3 0.2824 0 1 1 1 471.95786 1413.85901 1413.85782 0.84 0.0004 0/0 0 0 27896984 HCD 30 MS2 39.13268 1048.4 56.341 49.3921 13249 13249 13243 QEplus033719.raw F4 1013.2 878.4 1110 930.4 1140.1 1218.1 277 2.16 1 FALSE 0.007862 0.1297 -0.059 -250 54018 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRCTLAEK [K].dRcTLAEk.[L] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 3 P18760 Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3 Q9CX22; P18760; F8WGL3 "Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=2 SV=1; Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1" 1 3 3 0.4918 0 1 1 1 484.2728 1450.80384 1450.80882 -3.43 -0.00166 0/0 0 0 14721334 HCD 30 MS2 49.48363 1203.9 83.904 49.3966 13251 13251 13243 QEplus033719.raw F4 1264.3 1044.7 1310.3 866.5 1482.2 1255.2 364 2.44 1 FALSE 0.007623 0.1251 -0.051 -250 54042 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEQGSGPVSGEK [K].aEQGSGPVSGEk.[D] N-Term(TMT6plex); K12(TMT6plex) 6 E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" A0A087WS16; D3YWD1; J3QQ16; Q9Z0I9; O88493; E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen, type VI, alpha 3 (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen alpha3(VI) (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Type VI collagen alpha 3 subunit OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" 0 2 2 0.6343 0 1 1 1 802.43921 1603.87114 1603.86917 1.23 0.00099 0/0 0 0 9833765 HCD 30 MS2 0 499.5 110 49.4089 13255 13255 13254 QEplus033719.raw F4 539.1 493.4 427.5 395.5 714.2 427.6 402 4.84 1 FALSE 1.14E-05 9.49E-12 2.191 -250 54057 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RASFAEK [K].rASFAEk.[T] N-Term(TMT6plex); K7(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.463 0 1 1 1 422.92407 1266.75766 1266.75704 0.49 0.00021 0/0 0 0 71900768 HCD 30 MS2 31.09852 712.3 14.125 49.4137 13257 13257 13254 QEplus033719.raw F4 811.9 547.7 704.7 689.2 807.7 712.6 331 3.24 2 FALSE 0.0002909 0.005909 0.481 -250 54071 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FVGGAENTAHPR [K].fVGGAENTAHPR.[V] N-Term(TMT6plex) 2 Q3UQV0 Insulin-like growth factor-binding protein 5 OS=Mus musculus OX=10090 GN=Igfbp5 PE=1 SV=1 Q3TT49; Q3UQV0 Thyroglobulin type-1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Igfbp5 PE=2 SV=1; Insulin-like growth factor-binding protein 5 OS=Mus musculus OX=10090 GN=Igfbp5 PE=1 SV=1 0 3 3 0.7389 0 1 1 1 495.59894 1484.78226 1484.78074 1.02 0.00051 0/0 0 0 38477896 HCD 30 MS2 14.45319 344 31.307 49.4204 13260 13260 13254 QEplus033719.raw F4 465.5 228 312.8 353.3 315 389.6 246 5.63 1 FALSE 1.14E-05 1.04E-11 2.184 -250 54076 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMDEQIR [R].eMDEQIR.[L] N-Term(TMT6plex) 6 Q8C7C3; Q58E70; E9Q5J9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1 Q8C7C3; Q3TJ53; Q58E70; D3Z2H9; E9Q5J9; Q8K0Z5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin 3, related sequence 7 OS=Mus musculus OX=10090 GN=Tpm3-rs7 PE=3 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 3, gamma OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1" 0 2 2 0.5211 0 1 1 1 575.29303 1149.57878 1149.57714 1.43 0.00082 0/0 0 0 37967552 HCD 30 MS2 13.51603 1019.8 44.487 49.4227 13261 13261 13254 QEplus033719.raw F4 1140.1 988.5 1031.8 784 1201.9 972.7 160 2.84 3 FALSE 0.0006294 0.009707 0.409 -250 54096 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TESLVTR [R].tESLVTR.[F] N-Term(TMT6plex) 6 Q3TN39 Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1 Q3TN39; P10852; Q3U144; P10852-2; A0A0U1RPK4; Q8BTJ9 Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; Aamy domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; Isoform 2 of 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2; 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1 0 2 2 0.2133 0 1 1 1 517.80615 1034.60503 1034.60434 0.66 0.00034 0/0 0 0 46326588 HCD 30 MS2 15.5355 654 26.293 49.4368 13266 13266 13265 QEplus033719.raw F4 757.3 531.3 713.1 577.4 665.8 679 101 2.25 1 FALSE 0.0008718 0.01204 0.373 -250 54102 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIQTAVR [R].eIQTAVR.[L] N-Term(TMT6plex) 14 Q64475; Q64525 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3;Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64475; Q8CGP2; Q64525; Q8CGP1; P10854; A0JNS9; Q64478; P70696; Q8CGP2-2; Q8CBB6; Q6ZWY9; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 0 2 2 0.3852 0 1 1 1 523.31439 1045.62151 1045.62032 1.13 0.00059 0/0 0 0 218487312 HCD 30 MS2 25.559 677.6 5.235 49.4413 13268 13268 13265 QEplus033719.raw F4 746.1 833.3 729.8 370.2 886.1 500.4 270 2.57 2 FALSE 0.0008805 0.01219 0.37 -250 54109 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLTDLQR [K].rLTDLQR.[D] N-Term(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 1 3 3 0.1551 0 1 1 1 377.56686 1130.68604 1130.68432 1.52 0.00057 0/0 0 0 94604432 HCD 30 MS2 14.17068 261.8 11.113 49.4435 13269 13269 13265 QEplus033719.raw F4 286.5 138.3 292.8 271.2 197.1 384.8 316 3.16 1 FALSE 0.002396 0.04736 0.15 -250 54118 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNYNDRYDEIRR [R].tNYNDRYDEIRR.[H] N-Term(TMT6plex) 4 Q58ET1 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=1 SV=1 Q58ET1; Q5EBG5; Q6P1A9; Q80UT7 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=1 SV=1; 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=2 SV=1; 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=2 SV=1; 60S ribosomal protein L7a (Fragment) OS=Mus musculus OX=10090 GN=Rpl7a PE=2 SV=1 2 4 4 0.4955 0 1 1 1 461.73663 1843.9247 1843.92484 -0.07 -0.00003 0/0 0 0 74986760 HCD 30 MS2 19.07108 338.1 10.977 49.4458 13270 13270 13265 QEplus033719.raw F4 474.4 230 371.6 292 236.7 423.9 199 3.33 1 FALSE 1.14E-05 3.28E-05 0.949 -250 54134 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VMMEGGR [K].vMMEGGR.[S] N-Term(TMT6plex) 4 P29341 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2 P29341; Q3U8U8; Q8BN32; Q99KL3 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1 0 2 2 0.4388 0 1 1 1 504.76266 1008.51805 1008.51679 1.25 0.00063 0/0 0 0 66669208 HCD 30 MS2 44.22465 858.4 14.739 49.4503 13272 13272 13265 QEplus033719.raw F4 1151.5 628 784.6 715.2 1165.9 705.1 82 2.78 1 FALSE 0.0006216 0.009255 0.417 -250 54141 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARGPGLEK [K].aRGPGLEk.[T] N-Term(TMT6plex); K8(TMT6plex) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 1 3 3 0.4686 0 1 1 1 429.27191 1285.80118 1285.79924 1.51 0.00065 0/0 0 0 56320032 HCD 30 MS2 20.27881 814.7 21.602 49.4526 13273 13273 13265 QEplus033719.raw F4 606.3 983.2 959.9 464.5 1172.6 701.7 214 2.71 1 FALSE 0.0004091 0.007341 0.451 -250 54159 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCAAYLR [R].ncAAYLR.[L] N-Term(TMT6plex); C2(Carbamidomethyl) 3 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 A2VCK0; Q8VDD5; A0A2R8VKI5 Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-9 (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=1 0 2 2 0.5126 0 1 1 1 548.79291 1096.57854 1096.57708 1.33 0.00073 0/0 0 0 93331664 HCD 30 MS2 8.009218 729 14.589 49.4644 13277 13277 13276 QEplus033719.raw F4 709 713.2 849.1 600.8 849.2 652.5 123 2.38 1 FALSE 0.001092 0.01413 0.344 -250 54176 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAPQDFHPDR [R].eAPQDFHPDR.[V] N-Term(TMT6plex) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.6726 0 1 1 1 480.90765 1440.70841 1440.70691 1.04 0.0005 0/0 0 0 37777608 HCD 30 MS2 48.85363 946.7 46.007 49.4689 13279 13279 13276 QEplus033719.raw F4 1106.5 927.8 1077.4 507.2 986.7 1074.7 122 3.91 1 FALSE 1.14E-05 2.98E-06 1.147 -250 54185 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVAAMSVAQR [R].rVAAMSVAQR.[V] N-Term(TMT6plex) 5 Q3UKJ6 RNA helicase OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1 A0A0G2JG10; Q497W9; Q3UKJ6; Q3TFE5; Q3UDX4 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1; DEAH (Asp-Glu-Ala-His) box polypeptide 15 OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Dhx15 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Dhx15 PE=2 SV=1 1 3 3 0.4119 0 1 1 1 439.92657 1317.76517 1317.76225 2.21 0.00097 0/0 0 0 29651398 HCD 30 MS2 20.03382 385.6 27.035 49.4712 13280 13280 13276 QEplus033719.raw F4 449 312.2 373.1 296.8 514.3 368.5 530 5.22 1 FALSE 1.14E-05 9.61E-08 1.431 -250 54212 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLTDLQR [K].rLTDLQR.[D] N-Term(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 1 2 2 0.125 0 1 1 1 565.84607 1130.68486 1130.68432 0.48 0.00027 0/0 0 0 22719574 HCD 30 MS2 34.44634 605.1 78.921 49.4779 13283 13283 13276 QEplus033719.raw F4 607 416.4 684.3 605.2 546 772 324 2 1 FALSE 0.004616 0.08175 0.057 -250 54221 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNGGAAAMEK [K].nNGGAAAMEk.[L] N-Term(TMT6plex); K10(TMT6plex) 5 Q3ULZ3 Phosphoserine aminotransferase OS=Mus musculus OX=10090 GN=Psat1 PE=2 SV=1 Q3U6K9; Q99JU9; Q3ULZ3; Q543K5; Q8BTJ1 Phosphoserine aminotransferase OS=Mus musculus OX=10090 GN=Psat1 PE=1 SV=1; Phosphohydroxythreonine aminotransferase OS=Mus musculus OX=10090 GN=Psat1 PE=2 SV=1; Phosphoserine aminotransferase OS=Mus musculus OX=10090 GN=Psat1 PE=2 SV=1; Phosphoserine aminotransferase OS=Mus musculus OX=10090 GN=Psat1 PE=1 SV=1; Phosphoserine aminotransferase OS=Mus musculus OX=10090 GN=Psat1 PE=2 SV=1 0 2 2 0.6901 0 1 1 1 710.88483 1420.76238 1420.76187 0.36 0.00025 0/0 0 0 19675590 HCD 30 MS2 5.242317 828.8 110 49.4804 13284 13284 13276 QEplus033719.raw F4 1005.9 616.5 791.6 759.5 1011.8 787.3 318 4.13 1 FALSE 1.14E-05 2.75E-08 1.534 -250 54224 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFGNPGER [K].kFGNPGER.[L] N-Term(TMT6plex); K1(TMT6plex) 4 Q501J6 Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1 Q3TU25; Q501J6; Q3U741; Q501J6-2 RNA helicase OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; Isoform 2 of Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 1 3 3 0.5993 0 1 1 1 454.93509 1362.79071 1362.7894 0.96 0.00044 0/0 0 0 13105358 HCD 30 MS2 11.76348 938.3 74.765 49.4827 13285 13285 13276 QEplus033719.raw F4 960.9 860.6 1026.1 670.4 1171.2 940.5 465 2.77 1 FALSE 0.0005473 0.008234 0.435 -250 54237 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVLPNNR [R].dVLPNNR.[Q] N-Term(TMT6plex) 6 Q3TW28 Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2 PE=2 SV=1 Q64514; Q64514-2; Q3TW28; Q3U4M7; A0A087WRC0; Q3TB11 Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2 PE=1 SV=3; Isoform Short of Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2; Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2 PE=2 SV=1; Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2 PE=2 SV=1; Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2 PE=1 SV=1; Tripeptidyl-peptidase 2 (Fragment) OS=Mus musculus OX=10090 GN=Tpp2 PE=2 SV=1 0 2 2 0.4109 0 1 1 1 528.80377 1056.60027 1056.59992 0.33 0.00017 0/0 0 0 13265490 HCD 30 MS2 58.54114 1265 110 49.4948 13289 13289 13287 QEplus033719.raw F4 1513.1 962.6 1275 1102.3 1437.6 1299.5 131 2.02 1 FALSE 0.001506 0.02263 0.26 -250 54244 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQQLER [K].vQQLER.[SQ] N-Term(TMT6plex) 8 P39429; Q99K41 TNF receptor-associated factor 2 OS=Mus musculus OX=10090 GN=Traf2 PE=1 SV=1;EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1 P39429; Q8CAQ7; Q99K41; P39429-2; Q3U254; Q8C6X9; Q3TWR1; Q3USG5 TNF receptor-associated factor 2 OS=Mus musculus OX=10090 GN=Traf2 PE=1 SV=1; TNF receptor-associated factor OS=Mus musculus OX=10090 GN=Traf2 PE=2 SV=1; EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1; Isoform 2 of TNF receptor-associated factor 2 OS=Mus musculus OX=10090 GN=Traf2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; TNF receptor-associated factor OS=Mus musculus OX=10090 GN=Traf2 PE=2 SV=1; TNF receptor-associated factor OS=Mus musculus OX=10090 GN=Traf2 PE=2 SV=1; C1q domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1 0 2 2 0.2103 0 1 1 1 501.30136 1001.59545 1001.59411 1.33 0.00067 0/0 0 0 42488588 HCD 30 MS2 41.02284 754.4 18.359 49.4993 13291 13291 13287 QEplus033719.raw F4 777.2 566.8 882.8 855.2 574.4 869.8 295 2.33 2 FALSE 0.003937 0.07351 0.079 -250 54254 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASMCSIR [R].aSMcSIR.[S] N-Term(TMT6plex); C4(Carbamidomethyl) 14 Q8CE80 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1 Q8CE04; P51125-4; P51125-7; A0A338P6J9; Q921U7; P51125-6; Q8CB83; Q8C281; Q8CE80; Q3TTN2; P51125; A0A1Y7VJN8; P51125-3; P51125-2 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 4 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Isoform 7 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 6 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=2 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=2 SV=1; Calpastatin OS=Mus musculus OX=10090 GN=Cast PE=1 SV=2; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 3 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Isoform 2 of Calpastatin OS=Mus musculus OX=10090 GN=Cast 0 2 2 0.5249 0 1 1 1 527.27283 1053.53838 1053.53825 0.12 0.00006 0/0 0 0 35744784 HCD 30 MS2 8.274849 854 56.025 49.5016 13292 13292 13287 QEplus033719.raw F4 720.9 945.4 1068.2 602.7 899.3 887.7 76 2.61 1 FALSE 0.0008183 0.01117 0.386 -250 54260 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATVEDEK [K].aTVEDEk.[L] N-Term(TMT6plex); K7(TMT6plex) 15 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 0 2 2 0.2747 0 1 1 1 625.35669 1249.7061 1249.704 1.68 0.00105 0/0 0 0 19891760 HCD 30 MS2 17.5966 1377.3 80.062 49.5038 13293 13293 13287 QEplus033719.raw F4 2105.5 1047.2 1533.2 1062.6 1260.2 1255.4 416 2.73 1 FALSE 0.0003496 0.006923 0.46 -250 54269 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RASFAEK [K].rASFAEk.[T] N-Term(TMT6plex); K7(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.4118 0 1 1 1 633.88226 1266.75725 1266.75704 0.16 0.0001 0/0 0 0 9755203 HCD 30 MS2 12.95706 686.8 110 49.5063 13294 13294 13287 QEplus033719.raw F4 827.9 442.5 676.3 768.7 729.9 675.7 332 1.87 2 FALSE 0.001266 0.01723 0.307 -250 54277 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVECVESTGR [K].aVEcVESTGR.[H] N-Term(TMT6plex); C4(Carbamidomethyl) 1 Q9WV95 Pleckstrin homology-like domain family A member 3 OS=Mus musculus OX=10090 GN=Phlda3 PE=1 SV=1 Q9WV95 Pleckstrin homology-like domain family A member 3 OS=Mus musculus OX=10090 GN=Phlda3 PE=1 SV=1 0 2 2 0.7784 0 1 1 1 668.8399 1336.67253 1336.67283 -0.22 -0.00015 0/0 0 0 8988291 HCD 30 MS2 0 393.1 110 49.5089 13295 13295 13287 QEplus033719.raw F4 402.2 373.9 413.3 290.5 486.7 392 144 3.61 1 FALSE 1.14E-05 4.54E-06 1.113 -250 54284 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGPYPQR [R].mGPYPQR.[K] N-Term(TMT6plex) 2 Q9JKR6 Hypoxia up-regulated protein 1 OS=Mus musculus OX=10090 GN=Hyou1 PE=1 SV=1 Q8VCI2; Q9JKR6 Hyou1 protein OS=Mus musculus OX=10090 GN=Hyou1 PE=2 SV=1; Hypoxia up-regulated protein 1 OS=Mus musculus OX=10090 GN=Hyou1 PE=1 SV=1 0 2 2 0.2827 0 1 1 1 539.28998 1077.57268 1077.57127 1.31 0.00071 0/0 0 0 7575637 HCD 30 MS2 54.44861 1345.8 110 49.5114 13296 13296 13287 QEplus033719.raw F4 2272 978.1 1464.8 1037.4 1000.6 1322 225 1.91 1 FALSE 0.004914 0.08607 0.045 -250 54293 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLCPESQTGTR [K].dLcPESQTGTR.[A] N-Term(TMT6plex); C3(Carbamidomethyl) 2 Q52KR3 Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2 PE=1 SV=2 Q52KR3-6; Q52KR3 Isoform 6 of Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2; Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2 PE=1 SV=2 0 2 2 0.7216 0 1 1 1 746.86768 1492.72807 1492.72632 1.17 0.00088 0/0 0 0 5997246.5 HCD 30 MS2 0 333 110 49.5139 13297 13297 13287 QEplus033719.raw F4 351.6 268 363.7 321.1 395 298.8 125 3.7 1 FALSE 1.14E-05 1.42E-08 1.588 -250 54308 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDTSGEYKK [K].nDTSGEYkk.[A] N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex) 8 P14824; Q99JX6 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3;Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 Q3V2Z4; P14824; F8WIT2; Q3UI56; Q3TUI1; Q8CEX0; Q99JX6; Q3UDK4 Annexin OS=Mus musculus OX=10090 PE=2 SV=1; Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 1 3 3 0.4762 0 1 1 1 576.99622 1728.97409 1728.97353 0.33 0.00019 0/0 0 0 43872944 HCD 30 MS2 15.91008 1296.5 53.156 49.5234 13300 13300 13298 QEplus033719.raw F4 2321.1 827.8 1412.6 1260.8 872 1084.8 383 2.31 2 FALSE 1.14E-05 0.0001072 0.851 -250 54314 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAVHCTVR [K].iAVHcTVR.[G] N-Term(TMT6plex); C5(Carbamidomethyl) 3 Q8VC94 60S ribosomal protein L11 OS=Mus musculus OX=10090 GN=Rpl11 PE=2 SV=1 Q8VC94; A2BH06; Q9CXW4 60S ribosomal protein L11 OS=Mus musculus OX=10090 GN=Rpl11 PE=2 SV=1; 60S ribosomal protein L11 (Fragment) OS=Mus musculus OX=10090 GN=Rpl11 PE=1 SV=1; 60S ribosomal protein L11 OS=Mus musculus OX=10090 GN=Rpl11 PE=1 SV=4 0 3 3 0.5569 0 1 1 1 395.56412 1184.6778 1184.67713 0.57 0.00022 0/0 0 0 98434904 HCD 30 MS2 20.08683 237.2 10.16 49.5257 13301 13301 13298 QEplus033719.raw F4 227.9 227.5 235.5 238 319.7 174.7 204 3.34 1 FALSE 1.14E-05 0.0001536 0.821 -250 54324 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIVDAAR [R].aIVDAAR.[H] N-Term(TMT6plex) 6 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3UEK3; Q6A0B9; Q3TKF9; Q3UL99; Q3UM46 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; MKIAA0139 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 0 2 2 0.3527 0 1 1 1 472.79022 944.57317 944.57265 0.55 0.00026 0/0 0 0 63005592 HCD 30 MS2 58.28302 784.9 12.234 49.528 13302 13302 13298 QEplus033719.raw F4 622.6 720.5 952.6 638.5 779.1 996.3 249 2.24 1 FALSE 0.0001603 0.003782 0.533 -250 54333 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITVNTR [K].iTVNTR.[N] N-Term(TMT6plex) 8 Q3TG12 Phenylalanyl-tRNA synthetase beta subunit (Fragment) OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1 Q9CZU5; Q3TI98; Q3TMX6; Q3UYC2; Q8C644; Q3TG12; A0A087WPV4; Q9WUA2 Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit (Fragment) OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanine--tRNA ligase beta subunit (Fragment) OS=Mus musculus OX=10090 GN=Farsb PE=1 SV=1; Phenylalanine--tRNA ligase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=1 SV=2 0 2 2 0.1872 0 1 1 1 466.79019 932.57311 932.57265 0.49 0.00023 0/0 0 0 24799902 HCD 30 MS2 39.38668 713 30.119 49.5302 13303 13303 13298 QEplus033719.raw F4 762.8 572.5 795.9 604.8 717.8 823.9 106 2.19 1 FALSE 0.006977 0.1105 -0.021 -250 54343 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATQSVPK [K].aTQSVPk.[E] N-Term(TMT6plex); K7(TMT6plex) 2 Q99LP6 "GrpE protein homolog 1, mitochondrial OS=Mus musculus OX=10090 GN=Grpel1 PE=1 SV=1" Q99LP6; Q3UTB8 "GrpE protein homolog 1, mitochondrial OS=Mus musculus OX=10090 GN=Grpel1 PE=1 SV=1; GrpE protein homolog OS=Mus musculus OX=10090 GN=Grpel1 PE=2 SV=1" 0 2 2 0.5127 0 1 1 1 594.87201 1188.73674 1188.73524 1.26 0.00075 0/0 0 0 19648978 HCD 30 MS2 17.88278 1297.2 110 49.5327 13304 13304 13298 QEplus033719.raw F4 1607.4 864.3 1361.8 1403.4 1266.8 1279.7 478 2.36 1 FALSE 0.0002419 0.005035 0.5 -250 54358 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARGPGLEK [K].aRGPGLEk.[T] N-Term(TMT6plex); K8(TMT6plex) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 1 2 2 0.3788 0 1 1 1 643.40356 1285.79985 1285.79924 0.48 0.00031 0/0 0 0 9660842 HCD 30 MS2 10.88287 523.8 110 49.5378 13306 13306 13298 QEplus033719.raw F4 394.7 601.3 598.4 335.7 739.9 473 224 1.98 1 FALSE 0.008775 0.1554 -0.093 -250 54378 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQQASMEEK [K].eQQASMEEk.[F] N-Term(TMT6plex); K9(TMT6plex) 8 Q7M739 Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1 Q32P08; Q05CS8; Q7M739; F6ZDS4; Q3V1L5; Q8BK71; Q3TZB5; Q8BU18 Tpr protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Tpr protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1 0 2 2 0.4791 0 1 1 1 769.40063 1537.79399 1537.79323 0.5 0.00038 0/0 0 0 2768577 HCD 30 MS2 0 259.1 110 49.5501 13310 13310 13309 QEplus033719.raw F4 263 261.7 266.8 202.3 329.5 231.1 254 3.82 1 FALSE 1.14E-05 9.45E-07 1.242 -250 54382 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAEDAVYGR [R].dAEDAVYGR.[D] N-Term(TMT6plex) 4 H7BX95 Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1 Q6PDM2-2; Q6PDM2-3; H7BX95; Q6PDM2 Isoform 2 of Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1; Isoform 3 of Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1; Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1; Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=3 0 2 2 0.6593 0 1 1 1 612.8064 1224.60552 1224.6058 -0.23 -0.00014 0/0 0 0 2681036 HCD 30 MS2 0 417.6 110 49.5526 13311 13311 13309 QEplus033719.raw F4 442.8 371.2 462.7 350.7 451.7 426.2 108 3.17 1 FALSE 1.14E-05 3.24E-06 1.14 -250 54390 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLEQHK [R].vLEQHk.[L] N-Term(TMT6plex); K6(TMT6plex) 11 P26043; P26041 Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3;Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26043; Q3TH46; P26041; Q3U111; Q05DU4; A0A5F8MPB9; Q7TSG6; Q3UJJ8; Q8C2N4; Q3TZQ2; Q05CE6 Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=1; Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=2; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; Rdx protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1 0 3 3 0.2331 0 1 1 1 404.58832 1211.7504 1211.75123 -0.68 -0.00028 0/0 0 0 39901736 HCD 30 MS2 54.45473 515.9 13.711 49.5548 13312 13312 13309 QEplus033719.raw F4 865.8 336.4 478.4 339.3 503.5 572 225 2.66 2 FALSE 0.007467 0.1212 -0.044 -250 54435 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GACAGSEDAVK [R].gAcAGSEDAVk.[A] N-Term(TMT6plex); C3(Carbamidomethyl); K11(TMT6plex) 9 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; B2RXX6; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.6773 0 1 1 1 761.89941 1522.79155 1522.79356 -1.32 -0.00101 0/0 0 0 7548820.5 HCD 30 MS2 0 513.6 110 49.5714 13319 13319 13309 QEplus033719.raw F4 560.3 427.8 641.4 429.8 494.5 527.9 275 4.09 2 FALSE 1.14E-05 4.53E-10 1.872 -250 54439 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETTTTYSK [R].eTTTTYSk.[D] N-Term(TMT6plex); K8(TMT6plex) 1 Q61033 "Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4" Q61033 "Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4" 0 2 2 0.4798 0 1 1 1 694.88672 1388.76616 1388.76733 -0.84 -0.00059 0/0 0 0 3417519.5 HCD 30 MS2 0 327.6 110 49.5812 13322 13322 13320 QEplus033719.raw F4 329.5 353.4 342.3 223.5 459.5 257.5 350 3.21 1 FALSE 1.14E-05 0.0001245 0.839 -250 54446 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATHPLPK [K].aTHPLPk.[D] N-Term(TMT6plex); K7(TMT6plex) 1 Q9D964 "Glycine amidinotransferase, mitochondrial OS=Mus musculus OX=10090 GN=Gatm PE=1 SV=1" Q9D964 "Glycine amidinotransferase, mitochondrial OS=Mus musculus OX=10090 GN=Gatm PE=1 SV=1" 0 3 3 0.5378 0 1 1 1 407.92892 1221.77222 1221.77196 0.21 0.00009 0/0 0 0 32614206 HCD 30 MS2 11.15527 445.5 26.973 49.5835 13323 13323 13320 QEplus033719.raw F4 569.9 213.4 461.9 525.3 394.6 507.7 319 2.38 1 FALSE 0.0004091 0.007356 0.451 -250 54453 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPAAATATARPSTLPAR [K].rPAAATATARPSTLPAR.[D] N-Term(TMT6plex) 8 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; A0A140T8T5; P27546-3; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 4 4 0.7546 0 1 1 1 485.03702 1937.12624 1937.12421 1.05 0.00051 0/0 0 0 27160796 HCD 30 MS2 12.34972 243 45 49.5857 13324 13324 13320 QEplus033719.raw F4 260.1 215.8 271.7 171.2 309.9 229.4 409 6.52 2 FALSE 1.14E-05 3.17E-10 1.902 -250 54475 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQCPIVER [K].aQcPIVER.[L] N-Term(TMT6plex); C3(Carbamidomethyl) 4 Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 P97461; D3Z1S8; D3YYM6; Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=3; 40S ribosomal protein S5 (Fragment) OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1; 40S ribosomal protein S5 (Fragment) OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1; 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 0 2 2 0.2652 0 1 1 1 601.33307 1201.65886 1201.65606 2.33 0.0014 0/0 0 0 7457872.5 HCD 30 MS2 72.29006 1013.4 110 49.593 13327 13327 13320 QEplus033719.raw F4 1049.7 901.2 1136.1 763.8 1124.2 1105.5 237 2.79 1 FALSE 1.14E-05 0.0006922 0.694 -250 54487 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLEQHK [R].vLEQHk.[L] N-Term(TMT6plex); K6(TMT6plex) 11 P26043; P26041 Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3;Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26043; Q3TH46; P26041; Q3U111; Q05DU4; A0A5F8MPB9; Q7TSG6; Q3UJJ8; Q8C2N4; Q3TZQ2; Q05CE6 Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=1; Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=2; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; Rdx protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1 0 2 2 0.2996 0 1 1 1 606.38086 1211.75444 1211.75123 2.65 0.00161 0/0 0 0 3896690.75 HCD 30 MS2 0 593.4 110 49.598 13329 13329 13320 QEplus033719.raw F4 937.9 435.7 635 486.9 474.1 590.7 207 2.47 2 FALSE 0.002636 0.05243 0.135 -250 54497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous INSPNSK [R].iNSPNSk.[V] N-Term(TMT6plex); K7(TMT6plex) 2 Q8BMS1 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1" Q8BMS1; Q3TB39 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1; 3HCDH_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hadha PE=2 SV=1" 0 2 2 0.2165 0 1 1 1 609.36646 1217.72563 1217.72541 0.19 0.00011 0/0 0 0 3796108.5 HCD 30 MS2 29.53066 617 110 49.6005 13330 13330 13320 QEplus033719.raw F4 890.6 431 687.4 601.2 472.3 619.6 497 2.31 1 FALSE 0.002123 0.03963 0.176 -250 54507 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNLPSNDSSK [K].nNLPSNDSSk.[F] N-Term(TMT6plex); K10(TMT6plex) 9 Q9DBH1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubtf PE=2 SV=1 Q9DBH1; Q05DS1; E9Q4A8; A2AWT7; P25976; A2AWT6; G3UZW9; P25976-2; A2AWT5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubtf PE=2 SV=1; Ubtf protein (Fragment) OS=Mus musculus OX=10090 GN=Ubtf PE=2 SV=1; Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf PE=1 SV=1; Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf PE=1 SV=1; Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf PE=1 SV=1; Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf PE=1 SV=1; Nucleolar transcription factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Ubtf PE=1 SV=1; Isoform UBF2 of Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf; Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf PE=1 SV=1 0 2 2 0.4926 0 1 1 1 767.41394 1533.8206 1533.82731 -4.37 -0.00335 0/0 0 0 5686929 HCD 30 MS2 21.11703 329.1 110 49.6078 13332 13332 13331 QEplus033719.raw F4 300.4 350.7 357.8 216.2 421.8 327.5 292 3.39 1 FALSE 1.14E-05 6.07E-08 1.468 -250 54528 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKSEDEPTR [RK].lkSEDEPTR.[S] N-Term(TMT6plex); K2(TMT6plex) 9 Q8BFY9; Q99LG2 Transportin-1 OS=Mus musculus OX=10090 GN=Tnpo1 PE=1 SV=2;Transportin-2 OS=Mus musculus OX=10090 GN=Tnpo2 PE=1 SV=1 Q3U1S0; Q3TKD0; Q3U316; Q8BFY9; A0A1B0GT37; E9PV58; J3QMX2; Q8BFY9-2; Q99LG2 Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Tnpo2 PE=2 SV=1; Transportin-1 (Fragment) OS=Mus musculus OX=10090 GN=Tnpo1 PE=1 SV=1; Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Tnpo2 PE=2 SV=1; Transportin-1 OS=Mus musculus OX=10090 GN=Tnpo1 PE=1 SV=2; Transportin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tnpo2 PE=1 SV=1; Transportin-2 OS=Mus musculus OX=10090 GN=Tnpo2 PE=1 SV=1; Transportin-1 (Fragment) OS=Mus musculus OX=10090 GN=Tnpo1 PE=1 SV=1; Isoform 2 of Transportin-1 OS=Mus musculus OX=10090 GN=Tnpo1; Transportin-2 OS=Mus musculus OX=10090 GN=Tnpo2 PE=1 SV=1 1 3 3 0.459 0 1 1 1 511.62817 1532.86997 1532.86844 1 0.00051 0/0 0 0 25087580 HCD 30 MS2 34.70977 1039 66.253 49.6169 13336 13336 13331 QEplus033719.raw F4 1197.2 988.9 1085.2 797.3 1154.1 1011.2 487 2.44 2 FALSE 1.14E-05 0.000617 0.704 -250 54535 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAHVDVK [K].eAHVDVk.[F] N-Term(TMT6plex); K7(TMT6plex) 4 Q9Z2I9 "Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Sucla2 PE=1 SV=2" Q9CTE2; Q9Z2I9; Q3UCC6; Q05BC6 "Ligase_CoA domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sucla2 PE=2 SV=1; Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Sucla2 PE=1 SV=2; Succinate-CoA ligase subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Sucla2 PE=2 SV=1; Sucla2 protein OS=Mus musculus OX=10090 GN=Sucla2 PE=2 SV=1" 0 3 3 0.4927 0 1 1 1 419.25259 1255.74323 1255.74106 1.73 0.00072 0/0 0 0 18955052 HCD 30 MS2 65.45578 557.5 27.456 49.6191 13337 13337 13331 QEplus033719.raw F4 656 389.5 560.1 663 547.4 529.2 267 2.74 1 FALSE 0.002071 0.03851 0.18 -250 54544 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GACAGSEDAVK [R].gAcAGSEDAVk.[A] N-Term(TMT6plex); C3(Carbamidomethyl); K11(TMT6plex) 9 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; B2RXX6; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 3 3 0.7374 0 1 1 1 508.2728 1522.80384 1522.79356 6.75 0.00342 0/0 0 0 9977809 HCD 30 MS2 17.9643 756.1 110 49.6216 13338 13338 13331 QEplus033719.raw F4 794 623.1 867 659.9 733.8 858.9 303 4.76 2 FALSE 1.14E-05 4.71E-09 1.679 -250 54561 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPAAATATARPSTLPAR [K].rPAAATATARPSTLPAR.[D] N-Term(TMT6plex) 8 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; A0A140T8T5; P27546-3; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 3 3 0.5691 0 1 1 1 646.38116 1937.12894 1937.12421 2.44 0.00158 0/0 0 0 7497564.5 HCD 30 MS2 20.589 280.5 110 49.6266 13340 13340 13331 QEplus033719.raw F4 330.7 158.2 272.2 362.3 203.8 355.9 413 3.04 2 FALSE 4.43E-05 0.001435 0.63 -250 54569 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGEEKPEKPQR [K].aGEEkPEkPQR.[A] N-Term(TMT6plex); K5(TMT6plex); K8(TMT6plex) 4 Q6P8I4 PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1 Q3TM89; D6RDQ3; Q6P8I4; D6RGL8 PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1; PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1; PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1; PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1 0 4 4 0.5 0 1 1 1 489.79321 1956.15102 1956.14814 1.48 0.00072 0/0 0 0 6044266.5 HCD 30 MS2 25.92644 967.9 110 49.6291 13341 13341 13331 QEplus033719.raw F4 1124.7 854.8 960 702.4 1227.6 937.8 332 2.84 1 FALSE 0.002079 0.0387 0.179 -250 54576 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEGVSNQVK [K].qEGVSNQVk.[K] N-Term(TMT6plex); K9(TMT6plex) 9 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5-6; Q99PL5-4; Q99PL5-7; Q99PL5; Q99PL5-8; Q99PL5-5; Q99PL5-3; Q99PL5-2 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Isoform RRp15a of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp41 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp15b of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; Isoform RRp10 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp16.8 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp47 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp61 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 0 2 2 0.565 0 1 1 1 723.9212 1446.83513 1446.83166 2.4 0.00173 0/0 0 0 7856784.5 HCD 30 MS2 0 436.3 110 49.6364 13343 13343 13342 QEplus033719.raw F4 397.5 418.6 439.1 342.2 598.9 421.6 450 3.77 1 FALSE 1.14E-05 8.43E-07 1.251 -250 54580 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMNGESLDGR [R].aMNGESLDGR.[Q] N-Term(TMT6plex) 3 Q8BG13; O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1;RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 Q8BG13; O89086; Q5RJV3 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1; RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1; Rbm3 protein OS=Mus musculus OX=10090 GN=Rbm3 PE=2 SV=1 0 2 2 0.4085 0 1 1 1 639.81738 1278.62749 1278.63097 -2.72 -0.00174 0/0 0 0 2805535.25 HCD 30 MS2 0 281 110 49.639 13344 13344 13342 QEplus033719.raw F4 270.2 261.1 296.4 246.2 327.2 284.9 97 1.64 2 FALSE 0.002173 0.04168 0.169 -250 54593 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIIHDPGR [K].dIIHDPGR.[G] N-Term(TMT6plex) 4 P62918 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2 Q3UJS0; P62918; Q9Z237; Q3THC7 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2; Ribosomal protein L8 (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1 0 3 3 0.4884 0 1 1 1 384.55051 1151.63697 1151.63704 -0.06 -0.00002 0/0 0 0 26100680 HCD 30 MS2 16.68269 332.1 33.872 49.648 13348 13348 13342 QEplus033719.raw F4 338.5 261.9 328.1 338.1 370.4 355.7 243 3.01 1 FALSE 1.14E-05 0.0003336 0.757 -250 54608 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVSVTTAGQCR [R].sVSVTTAGQcR.[L] N-Term(TMT6plex); C10(Carbamidomethyl) 4 Q8VD75 Huntingtin-interacting protein 1 OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=2 A0A1D5RMM7; Q8VD75; Q8C303; A0A0J9YUX9 Huntingtin-interacting protein 1 OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=1; Huntingtin-interacting protein 1 OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=2; ENTH domain-containing protein OS=Mus musculus OX=10090 GN=Hip1 PE=2 SV=1; Huntingtin-interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=1 0 2 2 0.5754 0 1 1 1 697.86554 1394.7238 1394.72593 -1.52 -0.00106 0/0 0 0 7084202 HCD 30 MS2 0 297.5 110 49.653 13350 13350 13342 QEplus033719.raw F4 340 218.2 359.1 267.7 257.3 342.7 233 3.91 1 FALSE 1.14E-05 8.69E-08 1.439 -250 54618 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERPSQPEGLRK [R].eRPSQPEGLRk.[A] N-Term(TMT6plex); K11(TMT6plex) 9 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 Q8R2V4; Q6NZJ6-2; E9Q9E1; Q6PD42; E9PVC5; E9PVC6; A0A0J9YUS5; Q6NZJ6; Q8K0J8 Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 1 4 4 0.612 0 1 1 1 439.51218 1755.02688 1755.02774 -0.49 -0.00022 0/0 0 0 38132596 HCD 30 MS2 15.02727 611.3 45.201 49.6552 13351 13351 13342 QEplus033719.raw F4 652.1 488.6 648.5 524.6 668.9 685.3 378 3.17 1 FALSE 0.0002909 0.005886 0.481 -250 54624 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEEYPK [K].gEEYPk.[L] N-Term(TMT6plex); K6(TMT6plex) 1 Q3SZV7 TREMBL:Q3SZV7 (Bos taurus) Similar to hemopexin Q3SZV7 TREMBL:Q3SZV7 (Bos taurus) Similar to hemopexin 0 2 2 0.4455 0 1 1 1 590.83551 1180.66374 1180.66141 1.98 0.00117 0/0 0 0 15723380 HCD 30 MS2 18.20017 1027.6 110 49.6577 13352 13352 13342 QEplus033719.raw F4 1023.9 316.5 404.1 318.2 3744.7 358.4 289 2.02 1 TRUE 0.003817 0.07233 0.082 -250 54647 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESDWNQHK [K].eSDWNQHk.[E] N-Term(TMT6plex); K8(TMT6plex) 4 A0A3Q4EBK4 Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1 Q6P1B9; O08539-2; A0A3Q4EBK4; O08539 Bin1 protein OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Isoform 2 of Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1; Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1 0 3 3 0.6 0 1 1 1 501.26535 1501.7815 1501.77996 1.02 0.00051 0/0 0 0 15068827 HCD 30 MS2 46.00611 828.7 58.924 49.6698 13356 13356 13353 QEplus033719.raw F4 992 479.6 865.8 1107 590.6 937.3 232 3.1 1 FALSE 5.44E-05 0.002524 0.576 -250 54653 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQNLPVTR [K].qQNLPVTR.[I] N-Term(TMT6plex) 3 Q8BRF7 Sec1 family domain-containing protein 1 OS=Mus musculus OX=10090 GN=Scfd1 PE=1 SV=1 A0A1W2P6R7; Q8BRF7-3; Q8BRF7 Sec1 family domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Scfd1 PE=1 SV=1; Isoform 3 of Sec1 family domain-containing protein 1 OS=Mus musculus OX=10090 GN=Scfd1; Sec1 family domain-containing protein 1 OS=Mus musculus OX=10090 GN=Scfd1 PE=1 SV=1 0 2 2 0.5076 0 1 1 1 592.84863 1184.68999 1184.69489 -4.13 -0.00245 0/0 0 0 10426918 HCD 30 MS2 0 811 110 49.6723 13357 13357 13353 QEplus033719.raw F4 774.1 766.9 834.8 749.1 1110.3 630.9 200 2.62 1 FALSE 3.35E-05 0.001385 0.633 -250 54714 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPSDEYK [R].sPSDEYk.[D] N-Term(TMT6plex); K7(TMT6plex) 4 A2AMU9 Ribosome assembly factor mrt4 OS=Mus musculus OX=10090 GN=Mrto4 PE=1 SV=1 D6RCI7; Q9QYY3; A2AMU9; A2AMV1 mRNA turnover protein 4 homolog (Fragment) OS=Mus musculus OX=10090 GN=Mrto4 PE=1 SV=2; Ribosome assembly factor mrt4 (Fragment) OS=Mus musculus OX=10090 GN=mg684 PE=2 SV=1; Ribosome assembly factor mrt4 OS=Mus musculus OX=10090 GN=Mrto4 PE=1 SV=1; Ribosome assembly factor mrt4 OS=Mus musculus OX=10090 GN=Mrto4 PE=1 SV=1 0 2 2 0.4141 0 1 1 1 642.34808 1283.68889 1283.68835 0.42 0.00027 0/0 0 0 9318311 HCD 30 MS2 0 667.5 110 49.6966 13366 13366 13364 QEplus033719.raw F4 683.7 595.7 700.7 441.5 935.7 647.8 191 2.56 1 FALSE 0.0008445 0.01171 0.378 -250 54721 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAGSVFR [K].gAGSVFR.[A] N-Term(TMT6plex) 3 P62918 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2 Q3UJS0; P62918; Q3THC7 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1 0 2 2 0.344 0 1 1 1 461.7691 922.53093 922.53078 0.16 0.00007 0/0 0 0 37491148 HCD 30 MS2 27.74891 676.2 27.801 49.7011 13368 13368 13364 QEplus033719.raw F4 673.5 560.1 796.9 521.2 721.8 783.9 40 2.18 1 FALSE 0.001213 0.01644 0.316 -250 54733 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDNNWGKEER [K].qDNNWGkEER.[Q] N-Term(TMT6plex); K7(TMT6plex) 4 Q3V471 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1 Q3V471; Q61357; P16110; Q8C253 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1; Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1; Galectin-3 OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=3; Galectin OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=1 1 3 3 0.5315 0 1 1 1 578.63684 1733.89597 1733.89712 -0.66 -0.00038 0/0 0 0 16496006 HCD 30 MS2 23.24688 1444.1 110 49.7059 13370 13370 13364 QEplus033719.raw F4 1500.7 1796.6 1592.4 1146.7 1473.7 1154.7 257 3.33 1 FALSE 1.14E-05 7.01E-07 1.267 -250 54741 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAPQDFHPDR [R].eAPQDFHPDR.[V] N-Term(TMT6plex) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.6173 0 1 1 1 720.85632 1440.70537 1440.70691 -1.07 -0.00077 0/0 0 0 11990213 HCD 30 MS2 28.22855 422.4 110 49.7084 13371 13371 13364 QEplus033719.raw F4 377.4 446.2 475.3 270 544.4 421.1 121 4.05 1 FALSE 1.14E-05 5.17E-07 1.292 -250 54771 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AANAASGAGGSSAAAGSRPGDGGSLGSGAR [R].aANAASGAGGSSAAAGSRPGDGGSLGSGAR.[S] N-Term(TMT6plex) 3 Q4VAA2 Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3 PE=1 SV=2 Q4VAA2-2; Q4VAA2; A0A087WNP6 Isoform 2 of Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3; Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3 PE=1 SV=2; Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3 PE=1 SV=1 0 4 4 0.7529 0 1 1 1 669.3327 2674.30898 2674.30906 -0.03 -0.00002 0/0 0 0 10860270 HCD 30 MS2 5.631125 142.6 110 49.723 13376 13376 13375 QEplus033719.raw F4 160.1 114.8 163 118.9 149.6 149.4 237 7 1 FALSE 1.14E-05 6.31E-16 3.483 -250 54789 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TRPDGNCFYR [K].tRPDGNcFYR.[A] N-Term(TMT6plex); C7(Carbamidomethyl) 3 Q7TQI3 Ubiquitin thioesterase OTUB1 OS=Mus musculus OX=10090 GN=Otub1 PE=1 SV=2 D3YWF6; D3Z7K0; Q7TQI3 Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Otub1 PE=1 SV=1; Ubiquitinyl hydrolase 1 (Fragment) OS=Mus musculus OX=10090 GN=Otub1 PE=1 SV=1; Ubiquitin thioesterase OTUB1 OS=Mus musculus OX=10090 GN=Otub1 PE=1 SV=2 0 3 3 0.719 0 1 1 1 505.58487 1514.74005 1514.73716 1.91 0.00096 0/0 0 0 28135000 HCD 30 MS2 40.78986 631 46.268 49.7323 13380 13380 13375 QEplus033719.raw F4 907.7 425.1 578.2 634.3 700.4 540.1 77 4.2 1 FALSE 1.14E-05 1.11E-05 1.039 -250 54795 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATVEDEK [K].aTVEDEk.[L] N-Term(TMT6plex); K7(TMT6plex) 15 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 0 3 3 0.3022 0 1 1 1 417.23972 1249.70459 1249.704 0.47 0.0002 0/0 0 0 23578604 HCD 30 MS2 22.96922 571.6 39.909 49.7345 13381 13381 13375 QEplus033719.raw F4 797.9 398.1 643 445.4 544.9 600.2 426 2.78 1 FALSE 0.002611 0.05168 0.137 -250 54805 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPEVDGVRK [R].rPEVDGVRk.[A] N-Term(TMT6plex); K9(TMT6plex) 3 Q99LD8 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1" Q99LD8; G3UZR0; O08972 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1; Dimethylargininase (Fragment) OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1; Dimethylargininase OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1" 1 4 4 0.6 0 1 1 1 379.23547 1513.92006 1513.92148 -0.94 -0.00035 0/0 0 0 10742276 HCD 30 MS2 32.78481 504.8 52.253 49.7368 13382 13382 13375 QEplus033719.raw F4 506.1 442.2 613.9 441.9 495.5 529 254 2.75 1 FALSE 0.0006383 0.009789 0.408 -250 54812 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EASATPPSK [K].eASATPPSk.[K] N-Term(TMT6plex); K9(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 2 2 0.5902 0 1 1 1 673.3891 1345.77092 1345.77275 -1.36 -0.00091 0/0 0 0 6147313 HCD 30 MS2 28.06293 534.2 110 49.7417 13384 13384 13375 QEplus033719.raw F4 654.1 281 500.4 699.7 325.5 744.7 323 2.44 1 FALSE 1.14E-05 0.0006309 0.702 -250 54814 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVFESSR [K].eVFESSR.[M] N-Term(TMT6plex) 1 Q6P5E4 UDP-glucose:glycoprotein glucosyltransferase 1 OS=Mus musculus OX=10090 GN=Uggt1 PE=1 SV=4 Q6P5E4 UDP-glucose:glycoprotein glucosyltransferase 1 OS=Mus musculus OX=10090 GN=Uggt1 PE=1 SV=4 0 2 2 0.4775 0 1 1 1 541.78772 1082.56816 1082.56795 0.19 0.0001 0/0 0 0 5297772 HCD 30 MS2 46.34472 896.4 110 49.7442 13385 13385 13375 QEplus033719.raw F4 955.5 734.9 984.1 747.7 1046.8 909.6 93 2.22 1 FALSE 0.001395 0.01978 0.283 -250 54821 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDVSPTSQR [R].vDVSPTSQR.[L] N-Term(TMT6plex) 1 Q99KI0 "Aconitate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Aco2 PE=1 SV=1" Q99KI0 "Aconitate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Aco2 PE=1 SV=1" 0 2 2 0.1087 0 1 1 1 609.33838 1217.66948 1217.66873 0.62 0.00037 0/0 0 0 34461660 HCD 30 MS2 29.94423 850.5 49.798 49.7515 13387 13387 13386 QEplus033719.raw F4 1081.7 608.2 913.3 994.1 582.3 923.5 309 2.76 1 FALSE 1.14E-05 1.03E-05 1.045 -250 54831 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSTYVK [K].sSTYVk.[N] N-Term(TMT6plex); K6(TMT6plex) 15 Q3TXL5 Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1 Q3UCW4; Q3TIR0; Q3TWL1; Q3TXL5; Q8C243; Q3U7P0; Q3U651; Q3U8W5; Q3U7I9; Q3TWR6; Q3TJN3; P18242; Q3UAQ1; F8WIR1; Q3UC89 Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D (Fragment) OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Peptidase A1 domain-containing protein OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=1 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=1 SV=2; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1 0 2 2 0.4885 0 1 1 1 571.8446 1142.68193 1142.68215 -0.19 -0.00011 0/0 0 0 12346501 HCD 30 MS2 13.86319 1047 110 49.754 13388 13388 13386 QEplus033719.raw F4 1260.7 831.7 1021.5 1286.1 969.4 912.7 226 2.6 1 FALSE 0.002552 0.05 0.142 -250 54837 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQSGQCLR [K].iQSGQcLR.[R] N-Term(TMT6plex); C6(Carbamidomethyl) 2 Q3UKJ7 WD40 repeat-containing protein SMU1 OS=Mus musculus OX=10090 GN=Smu1 PE=2 SV=2 Q3UKJ7; Q3UKJ7-2 WD40 repeat-containing protein SMU1 OS=Mus musculus OX=10090 GN=Smu1 PE=2 SV=2; Isoform 2 of WD40 repeat-containing protein SMU1 OS=Mus musculus OX=10090 GN=Smu1 0 2 2 0.3799 0 1 1 1 595.82947 1190.65166 1190.65131 0.3 0.00018 0/0 0 0 11557856 HCD 30 MS2 36.64874 974 110 49.7587 13390 13390 13386 QEplus033719.raw F4 1275.8 794.5 1029.3 724.9 1067.7 951.9 311 2.29 1 FALSE 4.43E-05 0.001581 0.621 -250 54847 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTEDEVEK [K].gTEDEVEk.[Y] N-Term(TMT6plex); K8(TMT6plex) 8 P58774; A2AIM4; P58774-2 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 Q9D1R6; Q91VH3; P58774; A2AIM4; Q3SX28; P58774-2; A2AIM5; Q61344 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=8; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1 0 2 2 0.1867 0 1 1 1 682.86835 1364.72942 1364.73095 -1.12 -0.00076 0/0 0 0 10086663 HCD 30 MS2 0 780.8 110 49.7613 13391 13391 13386 QEplus033719.raw F4 967.5 367.2 799.6 893.9 596.9 1059.7 305 3 3 TRUE 1.14E-05 0.000487 0.724 -250 54869 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAPEESEAQAEGCSEER [K].aAPEESEAQAEGcSEER.[T] N-Term(TMT6plex); C13(Carbamidomethyl) 1 Q9CRB2 H/ACA ribonucleoprotein complex subunit 2 OS=Mus musculus OX=10090 GN=Nhp2 PE=1 SV=1 Q9CRB2 H/ACA ribonucleoprotein complex subunit 2 OS=Mus musculus OX=10090 GN=Nhp2 PE=1 SV=1 0 3 3 0.8932 0 1 1 1 693.64221 2078.91208 2078.91341 -0.64 -0.00044 0/0 0 0 6665189 HCD 30 MS2 0 92.6 110 49.7688 13394 13394 13386 QEplus033719.raw F4 92.6 84 97.3 88.9 96.1 96.5 16 6.46 1 FALSE 1.14E-05 1.21E-14 2.741 -250 54877 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDNNWGKEER [K].qDNNWGkEER.[Q] N-Term(TMT6plex); K7(TMT6plex) 4 Q3V471 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1 Q3V471; Q61357; P16110; Q8C253 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1; Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1; Galectin-3 OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=3; Galectin OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=1 1 2 2 0.648 0 1 1 1 867.45203 1733.89678 1733.89712 -0.2 -0.00017 0/0 0 0 3186619.5 HCD 30 MS2 0 147.8 110 49.7714 13395 13395 13386 QEplus033719.raw F4 147.7 197.2 164.8 127.3 126.1 123.9 265 3.04 1 FALSE 1.14E-05 1.39E-07 1.4 -250 54883 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AANAASGAGGSSAAAGSRPGDGGSLGSGAR [R].aANAASGAGGSSAAAGSRPGDGGSLGSGAR.[S] N-Term(TMT6plex) 3 Q4VAA2 Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3 PE=1 SV=2 Q4VAA2-2; Q4VAA2; A0A087WNP6 Isoform 2 of Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3; Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3 PE=1 SV=2; Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3 PE=1 SV=1 0 3 3 0.7171 0 1 1 1 892.10779 2674.30881 2674.30906 -0.09 -0.00008 0/0 0 0 15782506 HCD 30 MS2 5.328102 134.7 110 49.7739 13396 13396 13386 QEplus033719.raw F4 117.3 104.7 162.2 120.6 131 172.4 239 4.56 1 FALSE 1.14E-05 6.31E-16 5.59 -250 54893 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EASATPPSK [K].eASATPPSk.[K] N-Term(TMT6plex); K9(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 3 3 0.6132 0 1 1 1 449.26285 1345.77399 1345.77275 0.92 0.00041 0/0 0 0 16502937 HCD 30 MS2 34.83634 698.8 89.418 49.7812 13398 13398 13397 QEplus033719.raw F4 759 380.5 708.7 835.1 534.5 975.2 370 2.87 1 FALSE 0.0002909 0.005899 0.481 -250 54898 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFDEDAEDR [K].eFDEDAEDR.[L] N-Term(TMT6plex) 5 Q80UG5 Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 Q80UG5-3; Q80UG5; A2A6U3; Q80UG5-2; Q3TDR9 Isoform 3 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Isoform 2 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-type G domain-containing protein OS=Mus musculus OX=10090 GN=Septin9 PE=2 SV=1 0 2 2 0.8088 0 1 1 1 677.80096 1354.59465 1354.59602 -1.01 -0.00068 0/0 0 0 6986400 HCD 30 MS2 0 454.4 110 49.7837 13399 13399 13397 QEplus033719.raw F4 431 436.6 529.6 386.2 475.8 467.4 16 3.87 1 FALSE 1.14E-05 5.68E-06 1.094 -250 54903 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEGVSNQVK [K].qEGVSNQVk.[K] N-Term(TMT6plex); K9(TMT6plex) 9 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5-6; Q99PL5-4; Q99PL5-7; Q99PL5; Q99PL5-8; Q99PL5-5; Q99PL5-3; Q99PL5-2 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Isoform RRp15a of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp41 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp15b of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; Isoform RRp10 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp16.8 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp47 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp61 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 0 3 3 0.5286 0 1 1 1 482.94888 1446.8321 1446.83166 0.3 0.00014 0/0 0 0 30500258 HCD 30 MS2 12.84928 585.6 55.663 49.786 13400 13400 13397 QEplus033719.raw F4 565.9 540.1 623.3 440.4 740 603.9 466 3.5 1 FALSE 1.14E-05 8.67E-06 1.059 -250 54910 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITGDDSMR [K].iTGDDSMR.[T] N-Term(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.7263 0 1 1 1 562.28564 1123.56401 1123.56149 2.25 0.00126 0/0 0 0 16820746 HCD 30 MS2 20.9367 1038.1 110 49.7885 13401 13401 13397 QEplus033719.raw F4 1298 580.5 1044.1 1090.7 688.6 1526.8 124 2.85 1 FALSE 1.14E-05 0.0002573 0.778 -250 54929 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GACHGQTGMFPR [K].gAcHGQTGMFPR.[N] N-Term(TMT6plex); C3(Carbamidomethyl) 4 Q3U5I5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Grb2 PE=2 SV=1 Q3U5I5; Q60631-2; Q3U1Q4; B1AT92 Uncharacterized protein OS=Mus musculus OX=10090 GN=Grb2 PE=2 SV=1; Isoform 2 of Growth factor receptor-bound protein 2 OS=Mus musculus OX=10090 GN=Grb2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Grb2 PE=2 SV=1; Growth factor receptor-bound protein 2 OS=Mus musculus OX=10090 GN=Grb2 PE=1 SV=1 0 3 3 0.8083 0 1 1 1 516.58826 1547.75022 1547.74087 6.04 0.00312 0/0 0 0 9677205 HCD 30 MS2 0 506.9 110 49.7958 13404 13404 13397 QEplus033719.raw F4 638.7 402.8 525.4 424 522 528.6 90 4.33 1 FALSE 1.14E-05 2.26E-07 1.36 -250 54944 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LYNNHEIR [K].lYNNHEIR.[S] N-Term(TMT6plex) 6 A0A0R4J259 Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1 G3UZI2; G3V018; G3UZ48; Q7TMK9; A0A0R4J259; Q7TMK9-2 Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip 0 2 2 0.5071 0 1 1 1 644.35529 1287.70329 1287.7007 2.01 0.0013 0/0 0 0 4082887.5 HCD 30 MS2 0 347.4 110 49.8008 13406 13406 13397 QEplus033719.raw F4 336.8 306.4 373.8 315.9 417.5 333.9 334 2.8 1 FALSE 0.0002218 0.004723 0.508 -250 54978 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGVRPSQGGEAPR [K].lGVRPSQGGEAPR.[E] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.4362 0 1 1 1 518.29742 1552.87772 1552.8757 1.3 0.00067 0/0 0 0 18141754 HCD 30 MS2 31.88698 640.3 60.296 49.8151 13411 13411 13408 QEplus033719.raw F4 680.3 551.9 705 708.8 510.2 685.6 417 3.76 3 FALSE 1.14E-05 3.07E-07 1.335 -250 54984 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIIHDPGR [K].dIIHDPGR.[G] N-Term(TMT6plex) 4 P62918 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2 Q3UJS0; P62918; Q9Z237; Q3THC7 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2; Ribosomal protein L8 (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1 0 2 2 0.5277 0 1 1 1 576.32208 1151.63689 1151.63704 -0.13 -0.00007 0/0 0 0 11531650 HCD 30 MS2 9.017873 981.7 110 49.8176 13412 13412 13408 QEplus033719.raw F4 1100.9 825 1039.2 775 1044.8 1105.1 279 2.35 1 FALSE 7.59E-05 0.002784 0.566 -250 54989 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDVDNASLAR [R].qDVDNASLAR.[L] N-Term(TMT6plex) 8 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.5859 0 1 1 1 659.3526 1317.69792 1317.69601 1.45 0.00096 0/0 0 0 4672365 HCD 30 MS2 0 355.1 110 49.8201 13413 13413 13408 QEplus033719.raw F4 352 328.4 377.8 272.5 458.6 341.3 260 3.84 2 FALSE 1.14E-05 1.30E-08 1.596 -250 54997 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSTQEEIK [K].sSTQEEIk.[K] N-Term(TMT6plex); K8(TMT6plex) 2 Q3UHW9 ADF-H domain-containing protein OS=Mus musculus OX=10090 GN=Cfl2 PE=1 SV=1 A0A1Y7VJ71; Q3UHW9 Cofilin-2 OS=Mus musculus OX=10090 GN=Cfl2 PE=1 SV=1; ADF-H domain-containing protein OS=Mus musculus OX=10090 GN=Cfl2 PE=1 SV=1 0 2 2 0.3239 0 1 1 1 690.39246 1379.77764 1379.77823 -0.43 -0.0003 0/0 0 0 15462177 HCD 30 MS2 9.532502 795.2 110 49.8226 13414 13414 13408 QEplus033719.raw F4 937.2 429.7 747.7 1044.4 611 1001 366 2.84 1 FALSE 1.14E-05 0.0003741 0.747 -250 55009 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESDWNQHK [K].eSDWNQHk.[E] N-Term(TMT6plex); K8(TMT6plex) 4 A0A3Q4EBK4 Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1 Q6P1B9; O08539-2; A0A3Q4EBK4; O08539 Bin1 protein OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Isoform 2 of Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1; Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1 0 2 2 0.5627 0 1 1 1 751.39508 1501.78288 1501.77996 1.95 0.00146 0/0 0 0 8417302 HCD 30 MS2 0 369.7 110 49.8277 13416 13416 13408 QEplus033719.raw F4 443.8 180.5 347.6 597.2 266.2 382.9 232 3.27 1 FALSE 1.14E-05 0.0001527 0.822 -250 55021 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQTYQDAESR [R].mQTYQDAESR.[Q] N-Term(TMT6plex) 5 A0A2I3BQR1 5'-nucleotidase domain-containing 2 (Fragment) OS=Mus musculus OX=10090 GN=Nt5dc2 PE=1 SV=1 A0A2I3BQR1; A0A2I3BR81; Q91X76; A0A2I3BRL0; Q9CY30 5'-nucleotidase domain-containing 2 (Fragment) OS=Mus musculus OX=10090 GN=Nt5dc2 PE=1 SV=1; 5'-nucleotidase domain-containing 2 OS=Mus musculus OX=10090 GN=Nt5dc2 PE=1 SV=1; 5'-nucleotidase domain-containing 2 OS=Mus musculus OX=10090 GN=Nt5dc2 PE=1 SV=1; 5'-nucleotidase domain-containing 2 OS=Mus musculus OX=10090 GN=Nt5dc2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nt5dc2 PE=2 SV=1 0 2 2 0.6762 0 1 1 1 729.34711 1457.68694 1457.68921 -1.56 -0.00114 0/0 0 0 6844670.5 HCD 30 MS2 31.5248 402.5 110 49.8327 13418 13418 13408 QEplus033719.raw F4 340.4 362.7 576.1 485.1 262 388.7 49 3.49 1 FALSE 1.14E-05 9.84E-06 1.049 -250 55027 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGPLPAEDPAR [K].rGPLPAEDPAR.[E] N-Term(TMT6plex) 4 Q9QXS1 Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q499F9; A0A0R4J218; Q9QXS1-2; Q9QXS1 Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 1 3 3 0.5093 0 1 1 1 469.939 1407.80243 1407.79058 8.42 0.00395 0/0 0 0 1829097.5 HCD 30 MS2 0 515.1 110 49.84 13420 13420 13419 QEplus033719.raw F4 633.9 404.9 547.2 428.3 513.3 563.3 451 3.75 1 FALSE 1.14E-05 4.44E-06 1.114 -250 55041 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RIAVVGEGR [K].rIAVVGEGR.[E] N-Term(TMT6plex) 7 O88342 WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3 Q3TNK2; O88342; Q9DC08; Q3TE06; Q3U136; Q9DBM8; Q80ZI9 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat domain 1 (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1 1 3 3 0.536 0 1 1 1 395.9136 1185.72626 1185.72652 -0.22 -0.00009 0/0 0 0 52186216 HCD 30 MS2 38.08029 294.9 14.791 49.8448 13422 13422 13419 QEplus033719.raw F4 305.1 215.5 252.6 165.3 610 221.1 305 3.75 1 FALSE 1.14E-05 2.65E-07 1.347 -250 55047 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRGTIVAQGGGK [K].dRGTIVAQGGGk.[A] N-Term(TMT6plex); K12(TMT6plex) 2 Q8CGY6 Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b PE=1 SV=1 Q8CGY6; Q8CGY6-2 Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b PE=1 SV=1; Isoform 2 of Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b 1 3 3 0.6276 0 1 1 1 539.65363 1616.94632 1616.94842 -1.3 -0.0007 0/0 0 0 16930030 HCD 30 MS2 30.34194 759.9 47.613 49.847 13423 13423 13419 QEplus033719.raw F4 890.7 377.1 840.3 899.4 390.6 1161.4 461 5.72 1 FALSE 1.14E-05 3.40E-10 1.896 -250 55053 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTEDEVEK [K].gTEDEVEk.[Y] N-Term(TMT6plex); K8(TMT6plex) 8 P58774; A2AIM4; P58774-2 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 Q9D1R6; Q91VH3; P58774; A2AIM4; Q3SX28; P58774-2; A2AIM5; Q61344 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=8; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1 0 3 3 0.2697 0 1 1 1 455.58191 1364.73117 1364.73095 0.17 0.00008 0/0 0 0 27614126 HCD 30 MS2 22.20364 697.4 50.853 49.8493 13424 13424 13419 QEplus033719.raw F4 898.4 299.2 642.6 794.6 596.9 952.9 308 2.41 3 TRUE 0.001351 0.01912 0.289 -250 55061 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVDSDRPEGSK [K].vVDSDRPEGSk.[F] N-Term(TMT6plex); K11(TMT6plex) 4 Q8CE18 Cadherin-13 OS=Mus musculus OX=10090 PE=2 SV=1 Q8CE18; Q8BS79; Q8VDK4; Q9WTR5 Cadherin-13 OS=Mus musculus OX=10090 PE=2 SV=1; Cadherin-13 OS=Mus musculus OX=10090 PE=2 SV=1; Cadherin-13 OS=Mus musculus OX=10090 GN=Cdh13 PE=1 SV=1; Cadherin-13 OS=Mus musculus OX=10090 GN=Cdh13 PE=1 SV=2 0 3 3 0.1973 0 1 1 1 549.64099 1646.90842 1646.91137 -1.79 -0.00098 0/0 0 0 17762452 HCD 30 MS2 37.93711 757.5 80.132 49.8516 13425 13425 13419 QEplus033719.raw F4 823.6 539.6 809.3 830.1 683.6 858.8 401 2.23 1 FALSE 0.00124 0.01677 0.312 -250 55069 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAAQEAVK [K].eAAQEAVk.[L] N-Term(TMT6plex); K8(TMT6plex) 16 Q8VHM5; A0A0R4J259 Heterogeneous nuclear ribonucleoprotein R OS=Mus musculus OX=10090 GN=Hnrnpr PE=1 SV=1;Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1 Q3UZI0; G3UZI2; Q8VHM5; F7B5B5; G3V018; Q99KG1; G3UZ48; Q3UKV5; G3UXJ6; Q3UMT8; Q7TMK9; A0A0R4J259; Q9CT37; A2AW41; Q3U8W9; Q7TMK9-2 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpr PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein R OS=Mus musculus OX=10090 GN=Hnrnpr PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein R OS=Mus musculus OX=10090 GN=Hnrnpr PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Hnrpr protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpr PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpr PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpr PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpr PE=2 SV=3; Heterogeneous nuclear ribonucleoprotein R (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpr PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpr PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip 0 2 2 0.5075 0 1 1 1 652.38519 1303.76311 1303.76219 0.71 0.00046 0/0 0 0 13089311 HCD 30 MS2 37.8997 1131.4 96.722 49.8539 13426 13426 13419 QEplus033719.raw F4 1176.8 1016.9 1076.5 956.5 1529.1 1032.5 517 3.35 2 FALSE 1.14E-05 7.91E-05 0.877 -250 55081 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGVQVQQQK [R].sGVQVQQQk.[N] N-Term(TMT6plex); K9(TMT6plex) 4 C0LQ87 Syncoilin isoform 2 OS=Mus musculus OX=10090 GN=Sync PE=2 SV=1 C0LQ87; Q9EPM5-2; Q9EPM5-3; Q9EPM5 Syncoilin isoform 2 OS=Mus musculus OX=10090 GN=Sync PE=2 SV=1; Isoform 2 of Syncoilin OS=Mus musculus OX=10090 GN=Sync; Isoform 3 of Syncoilin OS=Mus musculus OX=10090 GN=Sync; Syncoilin OS=Mus musculus OX=10090 GN=Sync PE=1 SV=1 0 2 2 0.452 0 1 1 1 730.43561 1459.86394 1459.8633 0.44 0.00032 0/0 0 0 6053274 HCD 30 MS2 54.94999 453.5 110 49.8589 13428 13428 13419 QEplus033719.raw F4 499.1 280.4 475.8 596 315.7 554.2 496 2.81 1 FALSE 1.14E-05 5.34E-06 1.099 -250 55098 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TITPQNAPR [K].tITPQNAPR.[E] N-Term(TMT6plex) 11 Q8K019 Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=2 Q8K019; A0A087WRN1; F8WI22; Q3TRC6; Q8K019-3; Q8K019-2; A0A087WQA0; Q3UR37; Q3UDL9; Q05C67; Q3TSZ0 Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=2; Bcl-2-associated transcription factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1; Isoform 3 of Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1; Isoform 2 of Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1; Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1; Bclaf1 protein (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1 0 2 2 0.4308 0 1 1 1 613.85571 1226.70415 1226.70545 -1.06 -0.00065 0/0 0 0 7889335.5 HCD 30 MS2 25.66616 481.6 110 49.8737 13433 13433 13430 QEplus033719.raw F4 549.1 436.3 517.2 406.4 536.9 444 247 3.18 1 FALSE 5.44E-05 0.002177 0.59 -250 55107 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RATSIVK [K].rATSIVk.[W] N-Term(TMT6plex); K7(TMT6plex) 1 ENSEMBL:ENSBTAP00000024146 (Bos taurus) similar to alpha-2-macroglobulin isoform 1 ENSEMBL:ENSBTAP00000024146 (Bos taurus) similar to alpha-2-macroglobulin isoform 1 1 3 3 0.3357 0 1 1 1 411.60849 1232.81092 1232.80908 1.49 0.00061 0/0 0 0 5663631.5 HCD 30 MS2 72.63344 784.4 110 49.8762 13434 13434 13430 QEplus033719.raw F4 836.4 433.2 590.2 455.6 1802 589 95 2.8 1 TRUE 0.00219 0.04205 0.167 -250 55120 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGVRPSQGGEAPR [K].lGVRPSQGGEAPR.[E] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.5939 0 1 1 1 776.94098 1552.87468 1552.8757 -0.66 -0.00051 0/0 0 0 4891505 HCD 30 MS2 33.10153 90.3 110 49.8812 13436 13436 13430 QEplus033719.raw F4 97.2 73.8 103.3 106.1 62.9 98.7 414 2.93 3 FALSE 1.14E-05 1.27E-06 1.218 -250 55124 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIVDAAR [R].aIVDAAR.[H] N-Term(TMT6plex) 6 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3UEK3; Q6A0B9; Q3TKF9; Q3UL99; Q3UM46 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; MKIAA0139 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 0 2 2 0.1118 0 1 1 1 472.79279 944.57829 944.57265 5.98 0.00282 0/0 0 0 4569747 HCD 30 MS2 50.5109 775.6 110 49.8837 13437 13437 13430 QEplus033719.raw F4 816 625.6 802.8 656.1 879.5 873.5 384 1.61 1 FALSE 0.00116 0.01552 0.326 -250 55146 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQAASYGEAK [R].sQAASYGEAk.[R] N-Term(TMT6plex); K10(TMT6plex) 3 Q3UQS9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1 O55124; Q3UQS9; Q14BI5 M-protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1; Myomesin 2 OS=Mus musculus OX=10090 GN=Myom2 PE=1 SV=1 0 2 2 0.7281 0 1 1 1 735.40277 1469.79827 1469.80003 -1.2 -0.00088 0/0 0 0 3172860.5 HCD 30 MS2 57.3209 344.7 110 49.8983 13442 13442 13441 QEplus033719.raw F4 400.3 50.1 216.5 802.2 58.7 540.2 294 4.56 1 FALSE 1.14E-05 1.76E-09 1.761 -250 55152 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QNVQFMHNR [K].qNVQFMHNR.[M] N-Term(TMT6plex) 3 Q4FE56 Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Usp9x PE=1 SV=1 Q4FE56; P70398; Q8BS89 Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Usp9x PE=1 SV=1; Probable ubiquitin carboxyl-terminal hydrolase FAF-X OS=Mus musculus OX=10090 GN=Usp9x PE=1 SV=2; USP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Usp9x PE=2 SV=1 0 3 3 0.6292 0 1 1 1 468.24472 1402.71961 1402.72112 -1.08 -0.0005 0/0 0 0 3140617.25 HCD 30 MS2 76.18749 607.8 110 49.9008 13443 13443 13441 QEplus033719.raw F4 773.7 445.2 620.4 468.8 673.4 665 146 3.29 1 FALSE 1.14E-05 0.0001249 0.839 -250 55176 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVYCAHCR [K].lVYcAHcR.[G] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl) 2 Q9QZF2 Glypican-1 OS=Mus musculus OX=10090 GN=Gpc1 PE=1 SV=1 Q3U3U3; Q9QZF2 Glypican-1 (Fragment) OS=Mus musculus OX=10090 GN=Gpc1 PE=2 SV=1; Glypican-1 OS=Mus musculus OX=10090 GN=Gpc1 PE=1 SV=1 0 3 3 0.7238 0 1 1 1 436.55643 1307.65473 1307.65501 -0.22 -0.0001 0/0 0 0 25777712 HCD 30 MS2 16.97581 519.8 74.374 49.9076 13446 13446 13441 QEplus033719.raw F4 624.3 362.6 560.3 461.2 497.4 612.7 146 3.91 1 FALSE 1.14E-05 7.70E-05 0.879 -250 55182 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPEGGFR [R].kPEGGFR.[M] N-Term(TMT6plex); K1(TMT6plex) 7 Q6Q477 Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1 Q6Q477-2; Q6Q477; D1FNM9; D1FNM8; H2BL43; E9Q828; F7AAP4 Isoform 2 of Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4; Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=2 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=2 SV=2; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=2 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1 0 3 3 0.2236 0 1 1 1 416.91989 1248.74512 1248.74648 -1.09 -0.00045 0/0 0 0 13550590 HCD 30 MS2 33.15523 729.1 72.795 49.9098 13447 13447 13441 QEplus033719.raw F4 867.2 468.6 756.9 679.1 848.8 754.2 504 1.61 1 FALSE 0.004832 0.08468 0.049 -250 55192 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELSAQPEVHR [R].eLSAQPEVHR.[F] N-Term(TMT6plex) 2 Q9EP69 Phosphatidylinositol-3-phosphatase SAC1 OS=Mus musculus OX=10090 GN=Sacm1l PE=1 SV=1 Q9EP69; A0A5F8MPK9 Phosphatidylinositol-3-phosphatase SAC1 OS=Mus musculus OX=10090 GN=Sacm1l PE=1 SV=1; Phosphatidylinositol-3-phosphatase SAC1 OS=Mus musculus OX=10090 GN=Sacm1l PE=1 SV=1 0 3 3 0.491 0 1 1 1 465.59155 1394.7601 1394.75894 0.83 0.00039 0/0 0 0 10131742 HCD 30 MS2 63.3392 861.8 110 49.9123 13448 13448 13441 QEplus033719.raw F4 972.5 760.5 867 905.6 816 849.1 383 3.34 1 FALSE 4.43E-05 0.001591 0.62 -250 55201 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESQESLK [K].eSQESLk.[S] N-Term(TMT6plex); K7(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.0925 0 1 1 1 639.86993 1278.73259 1278.73055 1.59 0.00102 0/0 0 0 3850170.5 HCD 30 MS2 0 567.7 110 49.9174 13450 13450 13441 QEplus033719.raw F4 799.9 298.5 586.6 535.7 552.5 633.1 415 2.81 1 FALSE 0.0002719 0.005537 0.489 -250 55210 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTPDTGAASEEK [R].gTPDTGAASEEk.[G] N-Term(TMT6plex); K12(TMT6plex) 1 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 0 2 2 0.6909 0 1 1 1 810.92804 1620.8488 1620.8481 0.43 0.00035 0/0 0 0 3423010.25 HCD 30 MS2 0 317.1 110 49.9199 13451 13451 13441 QEplus033719.raw F4 353.3 252.9 331.4 241.1 365.6 358.1 302 3.85 1 FALSE 1.14E-05 2.73E-08 1.534 -250 55215 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SINQGLDR [R].sINQGLDR.[L] N-Term(TMT6plex) 10 Q52KI7 Low density lipoprotein receptor-related protein associated protein 1 OS=Mus musculus OX=10090 GN=Lrpap1 PE=1 SV=1 F6WMD1; Q52KI7; Q3TL96; Q6PEM5; Q6PB52; Q8C252; Q5D0B0; A0A1S6GWI9; Q6ZY49; Q8K295 Alpha-2-macroglobulin receptor-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Lrpap1 PE=1 SV=1; Low density lipoprotein receptor-related protein associated protein 1 OS=Mus musculus OX=10090 GN=Lrpap1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Lrpap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Lrpap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Lrpap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Low density lipoprotein receptor-associated protein 1 OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Lrpap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1 0 2 2 0.4551 0 1 1 1 566.3197 1131.63213 1131.63195 0.16 0.00009 0/0 0 0 16472606 HCD 30 MS2 24.53676 772.4 86.542 49.9294 13454 13454 13452 QEplus033719.raw F4 1031.1 525.7 830 700 748.8 798.9 299 3.12 1 FALSE 1.14E-05 5.91E-05 0.901 -250 55234 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIQLARR [K].dIQLARR.[I] N-Term(TMT6plex) 8 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 1 3 3 0.3111 0 1 1 1 367.56277 1100.67377 1100.67376 0.01 0 0/0 0 0 27461388 HCD 30 MS2 16.52432 404.9 38.49 49.9339 13456 13456 13452 QEplus033719.raw F4 391.4 528.6 479.9 225.4 564.8 239.3 213 3.15 2 FALSE 1.14E-05 7.21E-05 0.884 -250 55253 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQGVMVGMGQK [R-].hQGVMVGmGQk.[D] N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3UCF8; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 4 4 0.3522 0 1 1 1 412.22891 1645.89382 1645.89184 1.2 0.0005 0/0 0 0 9450087 HCD 30 MS2 40.26456 619.8 93.83 49.9384 13458 13458 13452 QEplus033719.raw F4 663.6 415 562.2 416.3 1163.4 498.3 398 4.23 4 FALSE 1.14E-05 7.05E-06 1.076 -250 55279 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVYCAHCR [K].lVYcAHcR.[G] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl) 2 Q9QZF2 Glypican-1 OS=Mus musculus OX=10090 GN=Gpc1 PE=1 SV=1 Q3U3U3; Q9QZF2 Glypican-1 (Fragment) OS=Mus musculus OX=10090 GN=Gpc1 PE=2 SV=1; Glypican-1 OS=Mus musculus OX=10090 GN=Gpc1 PE=1 SV=1 0 2 2 0.6655 0 1 1 1 654.33105 1307.65483 1307.65501 -0.14 -0.00009 0/0 0 0 3314459 HCD 30 MS2 30.93678 422.5 110 49.9485 13462 13462 13452 QEplus033719.raw F4 376.4 345.2 476.5 391.3 525.9 419.8 146 2.84 1 FALSE 3.35E-05 0.001198 0.646 -250 55286 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIQTAVR [R].eIQTAVR.[L] N-Term(TMT6plex) 14 Q64475; Q64525 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3;Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64475; Q8CGP2; Q64525; Q8CGP1; P10854; A0JNS9; Q64478; P70696; Q8CGP2-2; Q8CBB6; Q6ZWY9; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 0 2 2 0.3498 0 1 1 1 523.3147 1045.62212 1045.62032 1.72 0.0009 0/0 0 0 4107352832 HCD 30 MS2 2.7268 429.5 0.315 49.9558 13464 13464 13463 QEplus033719.raw F4 384.9 528.8 471.9 260.9 607.7 322.7 299 2.83 2 FALSE 0.001541 0.02322 0.256 -250 55294 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAQAEQAALK [R].rAQAEQAALk.[Q] N-Term(TMT6plex); K10(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.6673 0 1 1 1 515.31726 1543.93723 1543.93205 3.36 0.00173 0/0 0 0 17054378 HCD 30 MS2 7.83854 894.3 99.023 49.9581 13465 13465 13463 QEplus033719.raw F4 979 761.3 937.4 761.3 1000.7 926.2 306 5.41 2 FALSE 1.14E-05 1.66E-10 1.955 -250 55301 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAPQLDTAR [R].gAPQLDTAR.[E] N-Term(TMT6plex) 3 P37889 Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 P37889-2; Q99K58; P37889 Isoform 2 of Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2; Fibulin 2 OS=Mus musculus OX=10090 GN=Fbln2 PE=2 SV=1; Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 0 2 2 0.5776 0 1 1 1 579.32721 1157.64714 1157.6476 -0.4 -0.00023 0/0 0 0 87147256 HCD 30 MS2 22.17625 708.3 14.946 49.9604 13466 13466 13463 QEplus033719.raw F4 697 693.7 849.3 709.4 583.1 717.3 188 2.77 1 FALSE 1.14E-05 1.18E-05 1.033 -250 55319 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVDGLDR [K].dVDGLDR.[T] N-Term(TMT6plex) 3 Q545R0 "Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1" Q6NV50; Q3TGQ3; Q545R0 "Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctnna1 PE=2 SV=1; Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1" 0 2 2 0.3797 0 1 1 1 509.77432 1018.54137 1018.53665 4.63 0.00236 0/0 0 0 10929734 HCD 30 MS2 55.31137 1301 110 49.9651 13468 13468 13463 QEplus033719.raw F4 1675.8 1050.4 1431.5 831.1 1471.4 1345.5 248 2.66 1 FALSE 0.0006383 0.009878 0.406 -250 55361 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQGVMVGMGQK [R-].hQGVMVGmGQk.[D] N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3UCF8; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 2 2 0.152 0 1 1 1 823.45081 1645.89433 1645.89184 1.52 0.00125 0/0 0 0 10418531 HCD 30 MS2 0 440 110 49.9777 13473 13473 13463 QEplus033719.raw F4 474.5 355.4 602.3 359 359.3 489.7 390 2.96 4 FALSE 1.14E-05 1.10E-07 1.42 -250 55365 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANSANLK [R].aNSANLk.[L] N-Term(TMT6plex); K7(TMT6plex) 5 P06745 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4 B2RXT5; P06745; A0A0U1RQ72; A0A0U1RP97; B7ZWL9 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4; Glucose-6-phosphate isomerase 1 OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase 1 (Fragment) OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1 0 2 2 0.275 0 1 1 1 588.36292 1175.71855 1175.71484 3.16 0.00186 0/0 0 0 11254768 HCD 30 MS2 54.02153 1462.5 110 49.985 13475 13475 13474 QEplus033719.raw F4 2354.6 986.2 1457.1 1302.9 1145.6 1528.3 304 2.4 1 FALSE 0.002998 0.0586 0.118 -250 55382 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGNNTQLSK [K].dGNNTQLSk.[T] N-Term(TMT6plex); K9(TMT6plex) 1 P50543 Protein S100-A11 OS=Mus musculus OX=10090 GN=S100a11 PE=1 SV=1 P50543 Protein S100-A11 OS=Mus musculus OX=10090 GN=S100a11 PE=1 SV=1 0 2 2 0.6667 0 1 1 1 717.90179 1434.79631 1434.79528 0.72 0.00052 0/0 0 0 35623040 HCD 30 MS2 49.49623 730.1 40.495 49.9897 13477 13477 13474 QEplus033719.raw F4 809.5 747.3 753.5 398 1174.6 497.5 417 3.33 1 FALSE 1.14E-05 5.69E-06 1.094 -250 55389 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAAQEAVK [K].eAAQEAVk.[L] N-Term(TMT6plex); K8(TMT6plex) 16 Q8VHM5; A0A0R4J259 Heterogeneous nuclear ribonucleoprotein R OS=Mus musculus OX=10090 GN=Hnrnpr PE=1 SV=1;Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1 Q3UZI0; G3UZI2; Q8VHM5; F7B5B5; G3V018; Q99KG1; G3UZ48; Q3UKV5; G3UXJ6; Q3UMT8; Q7TMK9; A0A0R4J259; Q9CT37; A2AW41; Q3U8W9; Q7TMK9-2 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpr PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein R OS=Mus musculus OX=10090 GN=Hnrnpr PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein R OS=Mus musculus OX=10090 GN=Hnrnpr PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Hnrpr protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpr PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpr PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpr PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpr PE=2 SV=3; Heterogeneous nuclear ribonucleoprotein R (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpr PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpr PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip 0 3 3 0.4045 0 1 1 1 435.25922 1303.7631 1303.76219 0.7 0.0003 0/0 0 0 26263512 HCD 30 MS2 20.87765 545.4 49.523 49.9943 13479 13479 13474 QEplus033719.raw F4 566.6 424.5 558.5 474.7 714 534.1 517 3.56 2 FALSE 1.14E-05 7.63E-05 0.879 -250 55396 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVESQLK [K].rVESQLk.[I] N-Term(TMT6plex); K7(TMT6plex) 1 P05202 "Aspartate aminotransferase, mitochondrial OS=Mus musculus OX=10090 GN=Got2 PE=1 SV=1" P05202 "Aspartate aminotransferase, mitochondrial OS=Mus musculus OX=10090 GN=Got2 PE=1 SV=1" 1 3 3 0.1654 0 1 1 1 439.94705 1317.8266 1317.82546 0.87 0.00038 0/0 0 0 24196570 HCD 30 MS2 54.206 767.2 31.482 49.9965 13480 13480 13474 QEplus033719.raw F4 807.5 621.4 833.6 717.2 752.9 870.5 427 2.66 1 FALSE 0.001506 0.022 0.265 -250 55405 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVQDQPGLR [K].eVQDQPGLR.[L] N-Term(TMT6plex) 2 Q8CFX1 GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus OX=10090 GN=H6pd PE=1 SV=2 Q8CFX1; A2A7A7 GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus OX=10090 GN=H6pd PE=1 SV=2; GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus OX=10090 GN=H6pd PE=1 SV=1 0 2 2 0.3709 0 1 1 1 635.85132 1270.69536 1270.69528 0.06 0.00004 0/0 0 0 5323857 HCD 30 MS2 52.73862 430.9 110 50.0038 13483 13483 13474 QEplus033719.raw F4 461.5 333.7 477.5 380.8 443.1 488.7 241 3.02 1 FALSE 1.14E-05 0.0001915 0.803 -250 55412 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVDVPR [R].sVDVPR.[E] N-Term(TMT6plex) 4 Q9DB29 Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Mus musculus OX=10090 GN=Iah1 PE=1 SV=1 A0A1Y7VKC6; A0A1Y7VKA0; A0A1Y7VLY5; Q9DB29 Isoamyl acetate-hydrolyzing esterase 1 homolog (Fragment) OS=Mus musculus OX=10090 GN=Iah1 PE=1 SV=1; Isoamyl acetate-hydrolyzing esterase 1 homolog (Fragment) OS=Mus musculus OX=10090 GN=Iah1 PE=1 SV=1; Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Mus musculus OX=10090 GN=Iah1 PE=1 SV=1; Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Mus musculus OX=10090 GN=Iah1 PE=1 SV=1 0 2 2 0.3182 0 1 1 2 451.26901 901.53075 901.53045 0.33 0.00015 0/0 0 0 13860870 HCD 30 MS2 21.5921 778.2 110 50.0063 13484 13484 13474 QEplus033719.raw F4 918.7 562.5 801.9 678.2 686.2 1021.5 137 1.98 1 FALSE 0.004022 0.07406 0.077 -250 55416 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATVEDEK [K].aTVEDEk.[L] N-Term(TMT6plex); K7(TMT6plex) 15 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 0 2 2 0.3175 0 1 1 1 625.35541 1249.70354 1249.704 -0.37 -0.00023 0/0 0 0 9026547 HCD 30 MS2 27.89318 844.4 110 50.0136 13486 13486 13485 QEplus033719.raw F4 1097.8 610.5 918.9 723.5 866 849.9 424 2.74 1 FALSE 0.0002218 0.00461 0.511 -250 55424 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RIAVVGEGR [K].rIAVVGEGR.[E] N-Term(TMT6plex) 7 O88342 WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3 Q3TNK2; O88342; Q9DC08; Q3TE06; Q3U136; Q9DBM8; Q80ZI9 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat domain 1 (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1 1 2 2 0.2512 0 1 1 1 593.36658 1185.72588 1185.72652 -0.54 -0.00032 0/0 0 0 11223951 HCD 30 MS2 39.97811 433.6 110 50.0161 13487 13487 13485 QEplus033719.raw F4 430.7 366.9 457.5 336.7 559 451 273 2.07 1 FALSE 0.001736 0.0291 0.221 -250 55445 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FDETTADGR [K].fDETTADGR.[K] N-Term(TMT6plex) 2 Q497I3 "Fatty acid binding protein 5, epidermal OS=Mus musculus OX=10090 GN=Fabp5 PE=1 SV=1" Q497I3; Q3TLH6 "Fatty acid binding protein 5, epidermal OS=Mus musculus OX=10090 GN=Fabp5 PE=1 SV=1; FABP domain-containing protein OS=Mus musculus OX=10090 GN=Fabp5 PE=2 SV=1" 0 2 2 0.847 0 1 1 1 620.80438 1240.60149 1240.60071 0.63 0.00039 0/0 0 0 22529248 HCD 30 MS2 4.897967 844.9 82.725 50.0229 13490 13490 13485 QEplus033719.raw F4 841.9 995.4 892.1 473.3 1206.7 659.9 87 3.53 1 FALSE 4.43E-05 0.001523 0.624 -250 55452 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSTPEEVK [K].sSTPEEVk.[K] N-Term(TMT6plex); K8(TMT6plex) 4 P18760 Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3 Q9CX22; A0A494B9A7; P18760; F8WGL3 "Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=2 SV=1; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1; Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1" 0 2 2 0.5199 0 1 1 1 667.88214 1334.75701 1334.75677 0.18 0.00012 0/0 0 0 18132326 HCD 30 MS2 21.26421 1155.4 110 50.0254 13491 13491 13485 QEplus033719.raw F4 1199.4 1207.8 1156.1 709.9 1739.3 920.1 463 3.02 1 FALSE 0.0003496 0.006831 0.461 -250 55467 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVDPSTEADPR [K].eVDPSTEADPR.[L] N-Term(TMT6plex) 1 Q64337-2 Isoform 2 of Sequestosome-1 OS=Mus musculus OX=10090 GN=Sqstm1 Q64337-2 Isoform 2 of Sequestosome-1 OS=Mus musculus OX=10090 GN=Sqstm1 0 2 2 0.7614 0 1 1 1 722.8573 1444.70732 1444.71172 -3.04 -0.0022 0/0 0 0 3929917.75 HCD 30 MS2 0 217.8 110 50.0304 13493 13493 13485 QEplus033719.raw F4 225.5 185 263.9 166.4 239.6 226.5 81 2.85 1 FALSE 1.14E-05 0.0006108 0.705 -250 55476 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EKEPIAASTNR [R].ekEPIAASTNR.[G] N-Term(TMT6plex); K2(TMT6plex) 11 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" Q3URW8; B9EKJ1; E9Q447; B2RXX6; A3KGU9; Q3V1V5; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 1 3 3 0.4642 0 1 1 1 558.6593 1673.96335 1673.95865 2.81 0.00157 0/0 0 0 6056213.5 HCD 30 MS2 22.85962 881.7 110 50.0352 13495 13495 13485 QEplus033719.raw F4 865.4 797.5 1080.5 822.1 736.8 987.8 483 3.21 2 FALSE 1.14E-05 1.13E-07 1.417 -250 55490 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAQAEQAALK [R].rAQAEQAALk.[Q] N-Term(TMT6plex); K10(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.4613 0 1 1 1 772.4704 1543.93352 1543.93205 0.95 0.00074 0/0 0 0 4264033.5 HCD 30 MS2 0 240.7 110 50.0451 13498 13498 13496 QEplus033719.raw F4 248.6 211.6 265.5 219.7 255.2 243.5 370 3.75 2 FALSE 1.14E-05 1.69E-07 1.384 -250 55496 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPVSEVGDGR [R].kPVSEVGDGR.[W] N-Term(TMT6plex); K1(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.558 0 1 1 1 501.29636 1501.87452 1501.87386 0.43 0.00022 0/0 0 0 11722457 HCD 30 MS2 55.22581 946.4 88.304 50.0473 13499 13499 13496 QEplus033719.raw F4 1164.5 382.6 827.1 1544.6 546.6 1212.9 429 2.24 2 FALSE 1.14E-05 0.0003965 0.742 -250 55514 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CHAFEK [R].cHAFEk.[E] N-Term(TMT6plex); C1(Carbamidomethyl); K6(TMT6plex) 3 B1ARW4 Complex I-15 kDa (Fragment) OS=Mus musculus OX=10090 GN=Ndufs5 PE=1 SV=1 B1ARW4; Q99LY9; A0A1S6GWI4 Complex I-15 kDa (Fragment) OS=Mus musculus OX=10090 GN=Ndufs5 PE=1 SV=1; NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 OS=Mus musculus OX=10090 GN=Ndufs5 PE=1 SV=3; Complex I-15 kDa OS=Mus musculus OX=10090 GN=Ndufs5 PE=2 SV=1 0 3 3 0.5882 0 1 1 1 417.23141 1249.67969 1249.67635 2.67 0.00111 0/0 0 0 8011006 HCD 30 MS2 57.24456 846 110 50.0548 13502 13502 13496 QEplus033719.raw F4 1078.6 526.3 827 817.5 950.5 876.1 325 2.89 1 FALSE 0.00171 0.02855 0.224 -250 55527 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRCTLAEK [K].dRcTLAEk.[L] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 3 P18760 Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3 Q9CX22; P18760; F8WGL3 "Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=2 SV=1; Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1" 1 3 3 0.2108 0 1 1 1 484.27603 1450.81354 1450.80882 3.25 0.00157 0/0 0 0 4223013.5 HCD 30 MS2 35.05639 625.6 110 50.0598 13504 13504 13496 QEplus033719.raw F4 669.5 540.3 622.7 464 821.4 635.8 379 1.85 1 FALSE 0.007405 0.1199 -0.042 -250 55534 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSDCLHSPK [K].gSDcLHSPk.[G] N-Term(TMT6plex); C4(Carbamidomethyl); K9(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 3 3 0.3333 0 1 1 1 486.93112 1458.77881 1458.77752 0.89 0.00043 0/0 0 0 9026575 HCD 30 MS2 80.4352 1159.9 92.162 50.0621 13505 13505 13496 QEplus033719.raw F4 1212.6 867.3 1276 1282 992.2 1329.3 263 1.98 1 FALSE 0.007328 0.1176 -0.037 -250 55552 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQQELEEQTR [K].aQQELEEQTR.[R] N-Term(TMT6plex) 2 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 0 2 2 0.0812 0 1 1 1 730.88098 1460.75469 1460.75425 0.3 0.00022 0/0 0 0 5840213.5 HCD 30 MS2 43.60793 461.1 110 50.0744 13509 13509 13507 QEplus033719.raw F4 470.8 401.1 480.5 404.8 507.9 501.3 213 1.97 1 FALSE 1.14E-05 0.0004262 0.736 -250 55559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGNNTQLSK [K].dGNNTQLSk.[T] N-Term(TMT6plex); K9(TMT6plex) 1 P50543 Protein S100-A11 OS=Mus musculus OX=10090 GN=S100a11 PE=1 SV=1 P50543 Protein S100-A11 OS=Mus musculus OX=10090 GN=S100a11 PE=1 SV=1 0 3 3 0.6045 0 1 1 1 478.93716 1434.79694 1434.79528 1.16 0.00055 0/0 0 0 116216384 HCD 30 MS2 6.128583 545 17.582 50.0767 13510 13510 13507 QEplus033719.raw F4 612.4 499 499.9 318.5 947.9 392.5 422 3.54 1 FALSE 3.35E-05 0.001244 0.643 -250 55597 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETCSTLTESPR [R].eTcSTLTESPR.[N] N-Term(TMT6plex); C3(Carbamidomethyl) 2 G5E896 Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=1 G5E896; Q3UJB9 Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=1; Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=2 0 2 2 0.8149 0 1 1 1 755.37488 1509.74248 1509.74164 0.56 0.00042 0/0 0 0 4146481.25 HCD 30 MS2 29.89482 269 110 50.094 13517 13517 13507 QEplus033719.raw F4 292.5 227.4 292.7 238.4 281.6 281.5 129 3.35 1 FALSE 1.14E-05 5.47E-07 1.287 -250 55602 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQCPIVER [K].aQcPIVER.[L] N-Term(TMT6plex); C3(Carbamidomethyl) 4 Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 P97461; D3Z1S8; D3YYM6; Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=3; 40S ribosomal protein S5 (Fragment) OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1; 40S ribosomal protein S5 (Fragment) OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1; 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 0 2 2 0.1634 0 1 1 1 601.33179 1201.6563 1201.65606 0.2 0.00012 0/0 0 0 34449764 HCD 30 MS2 35.90231 481.9 36.928 50.1013 13519 13519 13518 QEplus033719.raw F4 430.1 402 526 460 516.1 557.3 241 2.02 1 FALSE 0.000565 0.008672 0.427 -250 55617 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYAEAVGR [K].kYAEAVGR.[A] N-Term(TMT6plex); K1(TMT6plex) 1 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 1 3 3 0.5221 0 1 1 1 451.27585 1351.81299 1351.80981 2.36 0.00106 0/0 0 0 28110656 HCD 30 MS2 14.9531 973.9 51.972 50.1058 13521 13521 13518 QEplus033719.raw F4 1000.5 805.5 988.4 1038.1 966.8 1044.2 309 2.26 1 FALSE 0.0001603 0.003802 0.533 -250 55643 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGEPTYSCR [K].vGEPTYScR.[D] N-Term(TMT6plex); C8(Carbamidomethyl) 4 Q6WKZ8 E3 ubiquitin-protein ligase UBR2 OS=Mus musculus OX=10090 GN=Ubr2 PE=1 SV=2 Q3UHE0; A0A286YCB2; Q6WKZ8; Q6WKZ8-2 E3 ubiquitin-protein ligase OS=Mus musculus OX=10090 GN=Ubr2 PE=2 SV=1; E3 ubiquitin-protein ligase OS=Mus musculus OX=10090 GN=Ubr2 PE=1 SV=1; E3 ubiquitin-protein ligase UBR2 OS=Mus musculus OX=10090 GN=Ubr2 PE=1 SV=2; Isoform 2 of E3 ubiquitin-protein ligase UBR2 OS=Mus musculus OX=10090 GN=Ubr2 0 2 2 0.7308 0 1 1 1 649.32416 1297.64104 1297.6408 0.18 0.00012 0/0 0 0 7494087 HCD 30 MS2 0 482 110 50.1156 13525 13525 13518 QEplus033719.raw F4 503.9 422.3 512.6 415.8 568.7 468.7 106 2.6 1 FALSE 0.001125 0.01483 0.335 -250 55652 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVINETTTR [K].tVINETTTR.[N] N-Term(TMT6plex) 5 E9Q2X6 Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1 Q3UR81; E9Q2X6; Q8CG47; Q6P7V9; Q3UZJ7 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Smc4 PE=2 SV=1; Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1; Structural maintenance of chromosomes protein 4 OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1; Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=2 SV=1; SMC_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Smc4 PE=2 SV=1 0 2 2 0.5794 0 1 1 1 632.35822 1263.70915 1263.7106 -1.14 -0.00072 0/0 0 0 6352922.5 HCD 30 MS2 44.78034 711.3 110 50.1181 13526 13526 13518 QEplus033719.raw F4 746.1 680.2 627.7 518.7 1060.6 634.6 364 3.4 1 FALSE 1.14E-05 9.14E-07 1.245 -250 55661 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DKGEVIR [K].dkGEVIR.[E] N-Term(TMT6plex); K2(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A2AT70; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 1 3 3 0.127 0 1 1 1 425.59906 1274.78263 1274.78326 -0.49 -0.00021 0/0 0 0 9199495 HCD 30 MS2 38.35295 1049.7 77.361 50.1204 13527 13527 13518 QEplus033719.raw F4 1293.4 345.5 845 1641.9 628.2 1544.1 615 1.89 2 FALSE 0.006527 0.1045 -0.006 -250 55673 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STVDPPAPSAGR [R].sTVDPPAPSAGR.[G] N-Term(TMT6plex) 7 Q8C5Q5 T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1 Q3TET0; Q3UIJ0; Q8C5Q5; A0A0N4SV00; Q3TJN2; Q3THH8; P80313 T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=1 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=1 SV=1 0 2 2 0.5513 0 1 1 1 692.37537 1383.74346 1383.74296 0.36 0.00025 0/0 0 0 9887557 HCD 30 MS2 0 288.9 110 50.1302 13530 13530 13529 QEplus033719.raw F4 309.8 181.7 331.4 278 273.2 359.6 257 3.12 1 FALSE 1.14E-05 5.44E-09 1.667 -250 55688 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSTPEEVK [K].sSTPEEVk.[K] N-Term(TMT6plex); K8(TMT6plex) 4 P18760 Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3 Q9CX22; A0A494B9A7; P18760; F8WGL3 "Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=2 SV=1; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1; Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1" 0 3 3 0.3891 0 1 1 1 445.59085 1334.758 1334.75677 0.92 0.00041 0/0 0 0 76212808 HCD 30 MS2 53.6818 536.5 9.83 50.135 13532 13532 13529 QEplus033719.raw F4 539 494.8 597.3 364.5 734.1 489.3 464 2.93 1 FALSE 0.00219 0.04205 0.167 -250 55696 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EREAELGAK [K].eREAELGAk.[A] N-Term(TMT6plex); K9(TMT6plex) 6 Q99LF8 Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1 Q99LF8; Q91YZ8; A3KFU5; Q3UX16; A3KFU8; Q6PHQ9 Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1 1 3 3 0.4963 0 1 1 1 487.62109 1460.84873 1460.84731 0.97 0.00047 0/0 0 0 56155824 HCD 30 MS2 25.91655 814 21.411 50.1372 13533 13533 13529 QEplus033719.raw F4 851.9 608 859.2 807.8 779 977.9 483 4.07 1 FALSE 1.14E-05 1.58E-06 1.2 -250 55703 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEITGEVR [K].gEITGEVR.[M] N-Term(TMT6plex) 7 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; I7HPX4; B7FAV1; F6Z2C0; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=4 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=8; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.415 0 1 1 1 545.30927 1089.61125 1089.61015 1.01 0.00055 0/0 0 0 18678206 HCD 30 MS2 19.07502 1004.6 110 50.1397 13534 13534 13529 QEplus033719.raw F4 1376.3 820 963.1 791.3 1164.2 912.9 310 2.53 1 FALSE 3.35E-05 0.001164 0.649 -250 55704 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GELTGEVR [K].gELTGEVR.[M] N-Term(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.415 0 1 2 2 545.30927 1089.61125 1089.61015 1.01 0.00055 0/0 0 0 18678206 HCD 30 MS2 19.07502 1004.6 110 50.1397 13534 13534 13529 QEplus033719.raw F4 1376.3 820 963.1 791.3 1164.2 912.9 310 2.53 1 FALSE 3.35E-05 0.001164 0.649 -250 55708 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYAEAVGR [K].kYAEAVGR.[A] N-Term(TMT6plex); K1(TMT6plex) 1 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 1 2 2 0.6095 0 1 1 1 676.4093 1351.81133 1351.80981 1.13 0.00076 0/0 0 0 10939756 HCD 30 MS2 23.64676 709.6 110 50.1495 13538 13538 13529 QEplus033719.raw F4 730.7 572.4 760.1 751.5 740.7 701.9 346 2.1 1 FALSE 0.0003211 0.006193 0.474 -250 55715 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GATDLYR [R].gATDLYR.[T] N-Term(TMT6plex) 1 Q8R3H7 Heparan sulfate 2-O-sulfotransferase 1 OS=Mus musculus OX=10090 GN=Hs2st1 PE=1 SV=2 Q8R3H7 Heparan sulfate 2-O-sulfotransferase 1 OS=Mus musculus OX=10090 GN=Hs2st1 PE=1 SV=2 0 2 2 0.3864 0 1 1 1 512.78693 1024.56658 1024.56248 4 0.00205 0/0 0 0 10197355 HCD 30 MS2 27.29589 1126.2 110 50.152 13539 13539 13529 QEplus033719.raw F4 1242 806.6 1266.9 869.7 1146.9 1425.2 177 2.2 1 FALSE 0.002157 0.04088 0.171 -250 55721 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIIHDPGR [K].dIIHDPGR.[G] N-Term(TMT6plex) 4 P62918 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2 Q3UJS0; P62918; Q9Z237; Q3THC7 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2; Ribosomal protein L8 (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1 0 3 3 0.516 0 1 1 1 384.55093 1151.63825 1151.63704 1.05 0.0004 0/0 0 0 163700704 HCD 30 MS2 5.397865 128.2 7.076 50.1593 13541 13541 13540 QEplus033719.raw F4 133.2 99 141.6 95.4 137.1 162.8 264 3.12 1 FALSE 1.14E-05 7.93E-05 0.876 -250 55744 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DHFEEAMR [R].dHFEEAMR.[F] N-Term(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 0 3 3 0.6911 0 1 1 1 421.87143 1263.59974 1263.59894 0.63 0.00027 0/0 0 0 14586474 HCD 30 MS2 56.38899 932.5 93.159 50.1708 13546 13546 13540 QEplus033719.raw F4 944.2 674.8 978.1 1001.8 886 1110.4 58 2.46 1 FALSE 0.001421 0.02025 0.279 -250 55753 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAQMAAK [R].eAQMAAk.[L] N-Term(TMT6plex); K7(TMT6plex) 7 Q91XT3 Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1 Q9CXQ8; Q91XT3; Q9DCP3; D3Z5N2; Q9CYU5; Q8C2H3; P54227 Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=2 0 2 2 0.1066 0 1 1 1 603.85162 1206.69597 1206.69166 3.57 0.00215 0/0 0 0 14038469 HCD 30 MS2 52.93191 1540 98.452 50.1731 13547 13547 13540 QEplus033719.raw F4 2437.3 1378.1 1613.6 982.5 1533.2 1295.4 415 2.44 1 FALSE 0.0003211 0.006326 0.472 -250 55762 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNELVIR [K].rNELVIR.[VM] N-Term(TMT6plex) 6 Q790Y8 Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pdx PE=1 SV=1 A3KG36; A0FF38; P97324; Q790Y8; Q3TNL1; G3UWD6 Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=G6pdx PE=1 SV=1; Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pd2 PE=3 SV=1; Glucose-6-phosphate 1-dehydrogenase 2 OS=Mus musculus OX=10090 GN=G6pd2 PE=1 SV=3; Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pdx PE=1 SV=1; Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pdx PE=2 SV=1; Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pd2 PE=1 SV=1 1 3 3 0.2226 0 1 1 1 376.90701 1128.70649 1128.70506 1.27 0.00048 0/0 0 0 13698155 HCD 30 MS2 30.58347 783.3 84.531 50.1754 13548 13548 13540 QEplus033719.raw F4 810.4 639.2 782 671.3 1034.8 761.9 193 2.92 1 FALSE 1.14E-05 0.0005868 0.709 -250 55771 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQQELEEQTR [K].aQQELEEQTR.[R] N-Term(TMT6plex) 2 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 0 2 2 0.5758 0 1 1 1 730.88208 1460.75688 1460.75425 1.8 0.00132 0/0 0 0 13169252 HCD 30 MS2 42.27398 785.1 101.848 50.1778 13549 13549 13540 QEplus033719.raw F4 827.9 703.6 781.9 657.4 947.4 792.5 230 3.56 1 FALSE 1.14E-05 5.82E-07 1.282 -250 55777 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGQPYCEK [R].dGQPYcEk.[D] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 7 A0A1D5RMM8 Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=2 A0A0J9YV30; Q3UG90; Q8VI36-2; F8VQ28; Q8VI36; A0A1D5RMM8; Q99LE7 Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=1; Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=2 SV=1; Isoform Alpha of Paxillin OS=Mus musculus OX=10090 GN=Pxn; Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=1; Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=1; Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=2; Paxillin (Fragment) OS=Mus musculus OX=10090 GN=Pxn PE=2 SV=1 0 2 2 0.5627 0 1 1 1 727.87238 1454.73747 1454.73499 1.71 0.00124 0/0 0 0 6452031 HCD 30 MS2 36.51729 514.5 110 50.1803 13550 13550 13540 QEplus033719.raw F4 596.4 393.5 570.3 475.9 497.4 553.7 189 2.95 1 FALSE 1.14E-05 0.0001453 0.826 -250 55783 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPSYGLSR [R].gPSYGLSR.[E] N-Term(TMT6plex) 4 Q9WVA4; Q9R1Q8 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4;Transgelin-3 OS=Mus musculus OX=10090 GN=Tagln3 PE=1 SV=1 Q8BT95; Q9WVA4; A0A0A6YXG6; Q9R1Q8 Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4; Transgelin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Mus musculus OX=10090 GN=Tagln3 PE=1 SV=1 0 2 2 0.5341 0 1 1 1 533.29932 1065.59136 1065.58902 2.19 0.00117 0/0 0 0 22380968 HCD 30 MS2 28.18918 1219.7 93.118 50.1876 13552 13552 13551 QEplus033719.raw F4 1383.6 1180.1 1258.7 840.9 1604.9 1050.2 184 2.79 2 FALSE 0.0002419 0.005034 0.5 -250 55790 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEFQAETK [K].hEFQAETk.[K] N-Term(TMT6plex); K8(TMT6plex) 6 Q922R9 Trap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1 Q3TSG8; Q922R9; Q3UPJ8; Q9CQN1; Q3TK29; Q922Z3 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; Trap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; Heat shock protein 75 kDa, mitochondrial OS=Mus musculus OX=10090 GN=Trap1 PE=1 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; Trap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1" 0 3 3 0.7422 0 1 1 1 483.26993 1447.79523 1447.79455 0.47 0.00023 0/0 0 0 36538652 HCD 30 MS2 31.93274 1040.1 47.487 50.1898 13553 13553 13551 QEplus033719.raw F4 1125.7 813.6 1076.5 1058.4 998.3 1168.3 360 4.19 1 FALSE 1.14E-05 9.49E-06 1.052 -250 55793 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YIQHTYRK [K].yIQHTYRk.[G] N-Term(TMT6plex); K8(TMT6plex) 1 Q99PT1 Rho GDP-dissociation inhibitor 1 OS=Mus musculus OX=10090 GN=Arhgdia PE=1 SV=3 Q99PT1 Rho GDP-dissociation inhibitor 1 OS=Mus musculus OX=10090 GN=Arhgdia PE=1 SV=3 1 4 4 0.4444 0 1 1 1 392.48444 1566.91591 1566.91567 0.16 0.00006 0/0 0 0 52114584 HCD 30 MS2 44.30237 487.1 16.674 50.1921 13554 13554 13551 QEplus033719.raw F4 524.7 406.2 523.3 407.8 618.2 442.3 398 2.34 1 FALSE 0.004699 0.08264 0.054 -250 55799 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGQGNLPVR [K].eGQGNLPVR.[G] N-Term(TMT6plex) 3 Q3UK27 NEDD8-activating enzyme E1 regulatory subunit OS=Mus musculus OX=10090 GN=Nae1 PE=1 SV=1 Q3UK27; Q3TS59; E0CZE0 NEDD8-activating enzyme E1 regulatory subunit OS=Mus musculus OX=10090 GN=Nae1 PE=1 SV=1; ThiF domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Nae1 PE=2 SV=1; NEDD8-activating enzyme E1 regulatory subunit OS=Mus musculus OX=10090 GN=Nae1 PE=1 SV=1 0 2 2 0.4829 0 1 1 1 599.84119 1198.6751 1198.67415 0.79 0.00047 0/0 0 0 22365468 HCD 30 MS2 11.3368 794.4 110 50.1946 13555 13555 13551 QEplus033719.raw F4 858.9 672.8 831.8 701.8 840.6 860.5 234 2.63 1 FALSE 1.14E-05 0.0008635 0.675 -250 55817 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSLDDSAK [K].nSLDDSAk.[K] N-Term(TMT6plex); K8(TMT6plex) 6 A0A140LHR3 Microsomal signal peptidase 25 kDa subunit OS=Mus musculus OX=10090 GN=Spcs2 PE=1 SV=1 A0A140LHR3; Q9CYN2; A0A140LHG8; A0A140LHW5; A0A140LJ01; A0A140LIK0 Microsomal signal peptidase 25 kDa subunit OS=Mus musculus OX=10090 GN=Spcs2 PE=1 SV=1; Signal peptidase complex subunit 2 OS=Mus musculus OX=10090 GN=Spcs2 PE=1 SV=1; Microsomal signal peptidase 25 kDa subunit OS=Mus musculus OX=10090 GN=Spcs2 PE=1 SV=1; Microsomal signal peptidase 25 kDa subunit OS=Mus musculus OX=10090 GN=Spcs2 PE=1 SV=1; Microsomal signal peptidase 25 kDa subunit (Fragment) OS=Mus musculus OX=10090 GN=Spcs2 PE=1 SV=1; Microsomal signal peptidase 25 kDa subunit OS=Mus musculus OX=10090 GN=Spcs2 PE=1 SV=1 0 2 2 0.5345 0 1 1 1 654.36469 1307.72209 1307.72072 1.05 0.00069 0/0 0 0 12513142 HCD 30 MS2 7.678862 739.8 110 50.2043 13559 13559 13551 QEplus033719.raw F4 771.8 578.2 756.5 674.5 951.7 705.8 453 3.48 1 FALSE 1.14E-05 5.79E-05 0.902 -250 55824 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YTGAGLSGR [R].yTGAGLSGR.[Q] N-Term(TMT6plex) 1 Q99LC2 Cleavage stimulation factor subunit 1 OS=Mus musculus OX=10090 GN=Cstf1 PE=1 SV=1 Q99LC2 Cleavage stimulation factor subunit 1 OS=Mus musculus OX=10090 GN=Cstf1 PE=1 SV=1 0 2 2 0.517 0 1 1 1 555.80939 1110.6115 1110.61049 0.91 0.0005 0/0 0 0 11551391 HCD 30 MS2 23.27575 986.1 110 50.2068 13560 13560 13551 QEplus033719.raw F4 1190.2 808.6 1073.3 873.8 961 1009.9 162 2.65 1 FALSE 1.14E-05 0.0004994 0.722 -250 55833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAAVCQEK [K].eAAVcQEk.[K] N-Term(TMT6plex); C5(Carbamidomethyl); K8(TMT6plex) 3 B9EKB8 Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1 B9EKB8; B7ZWC4; Q07113 Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Cation-independent mannose-6-phosphate receptor OS=Mus musculus OX=10090 GN=Igf2r PE=1 SV=1 0 2 2 0.4888 0 1 1 1 696.88312 1392.75896 1392.75572 2.32 0.00162 0/0 0 0 4283057.5 HCD 30 MS2 22.17398 547.2 110 50.2093 13561 13561 13551 QEplus033719.raw F4 582.4 437.8 606.1 516.2 591.4 549.4 375 3.56 1 FALSE 1.14E-05 3.21E-05 0.951 -250 55842 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAGSVFR [K].gAGSVFR.[A] N-Term(TMT6plex) 3 P62918 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2 Q3UJS0; P62918; Q3THC7 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1 0 2 2 0.3333 0 1 1 1 461.76904 922.53081 922.53078 0.03 0.00001 0/0 0 0 9576309 HCD 30 MS2 27.75401 870.2 87.903 50.2166 13563 13563 13562 QEplus033719.raw F4 1067.4 634.5 880.6 759.8 945.1 934 40 1.8 1 FALSE 0.003988 0.07396 0.077 -250 55858 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGYTSPK [K].eGYTSPk.[R] N-Term(TMT6plex); K7(TMT6plex) 4 Q3TCS0 Prolyl endopeptidase OS=Mus musculus OX=10090 GN=Prep PE=2 SV=1 Q3TCS0; Q8C6A3; Q3TQ97; Q9QUR6 Prolyl endopeptidase OS=Mus musculus OX=10090 GN=Prep PE=2 SV=1; Prolyl endopeptidase OS=Mus musculus OX=10090 GN=Prep PE=2 SV=1; Prolyl endopeptidase (Fragment) OS=Mus musculus OX=10090 GN=Prep PE=2 SV=1; Prolyl endopeptidase OS=Mus musculus OX=10090 GN=Prep PE=1 SV=1 0 2 2 0.5 0 1 1 1 620.35376 1239.70024 1239.69852 1.39 0.00086 0/0 0 0 42541432 HCD 30 MS2 32.50286 866.2 27.196 50.2214 13565 13565 13562 QEplus033719.raw F4 914.2 767 881.9 755.1 1047.4 831.5 314 2.32 1 FALSE 0.001011 0.01329 0.355 -250 55871 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FIPEHSR [K].fIPEHSR.[N] N-Term(TMT6plex) 2 A0A0D2X7Z2 EEF1A lysine methyltransferase 1 OS=Mus musculus OX=10090 GN=Eef1akmt1 PE=1 SV=1 A0A0D2X7Z2; Q9CY45 EEF1A lysine methyltransferase 1 OS=Mus musculus OX=10090 GN=Eef1akmt1 PE=1 SV=1; EEF1A lysine methyltransferase 1 OS=Mus musculus OX=10090 GN=Eef1akmt1 PE=1 SV=1 0 3 3 0.5158 0 1 1 1 372.2121 1114.62174 1114.62066 0.97 0.00036 0/0 0 0 7812173 HCD 30 MS2 46.86155 510 110 50.2286 13568 13568 13562 QEplus033719.raw F4 568.4 377.8 558.8 407.2 557.8 590.2 158 2.85 1 FALSE 0.0003496 0.006865 0.461 -250 55879 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMTETMER [K].eMTETMER.[K] N-Term(TMT6plex) 3 Q99104 Unconventional myosin-Va OS=Mus musculus OX=10090 GN=Myo5a PE=1 SV=2 Q99104; D3YZ62; D3Z4J3 Unconventional myosin-Va OS=Mus musculus OX=10090 GN=Myo5a PE=1 SV=2; Unconventional myosin-Va OS=Mus musculus OX=10090 GN=Myo5a PE=1 SV=1; Unconventional myosin-Va OS=Mus musculus OX=10090 GN=Myo5a PE=1 SV=1 0 2 2 0.5993 0 1 1 1 628.29852 1255.58977 1255.58599 3.01 0.00189 0/0 0 0 5614126 HCD 30 MS2 35.44363 480.2 110 50.2311 13569 13569 13562 QEplus033719.raw F4 437.5 448.9 521.2 371.1 612.1 490.3 38 2.87 1 FALSE 1.14E-05 0.0004844 0.725 -250 55886 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVQQELSR [K].kVQQELSR.[VG] N-Term(TMT6plex); K1(TMT6plex) 5 P51855 Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1 P51855; Q3UEE2; Q8R436; Q3TWM2; H3BKH4 Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1; Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1; Glutathione synthase (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=2 SV=1; Glutathione synthase (Fragment) OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1 1 2 2 0.3313 0 1 1 1 723.44647 1445.88567 1445.88403 1.13 0.00082 0/0 0 0 5293741.5 HCD 30 MS2 21.77951 298.1 110 50.2336 13570 13570 13562 QEplus033719.raw F4 319.7 250.8 328.9 270.7 313.7 304.5 435 1.66 1 FALSE 0.0005076 0.007909 0.441 -250 55905 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DISENK [K].dISENk.[R] N-Term(TMT6plex); K6(TMT6plex) 16 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; Q3UXU1; Q3TH56; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q3TB63; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 0 2 2 0.2589 0 1 1 1 582.33783 1163.66838 1163.66722 1 0.00058 0/0 0 0 97475744 HCD 30 MS2 7.21052 1040.6 17.548 50.2457 13574 13574 13573 QEplus033719.raw F4 1928.8 726.1 1224.3 638.9 665.5 1060.2 440 2.24 1 FALSE 0.004906 0.08589 0.046 -250 55920 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YADQEVPR [K].yADQEVPR.[S] N-Term(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.6159 0 1 1 1 603.81982 1206.63237 1206.63162 0.63 0.00038 0/0 0 0 48822256 HCD 30 MS2 35.85665 773.3 23.761 50.2503 13576 13576 13573 QEplus033719.raw F4 989.2 570.1 867.8 665 662.1 885.8 228 3.02 1 FALSE 2.26E-05 0.001084 0.655 -250 55923 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VFPHPNR [R].vFPHPNR.[M] N-Term(TMT6plex) 2 Q9JKB3 Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3 PE=1 SV=2 Q9JKB3; Q8BPG0 Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3 PE=1 SV=2; CSD domain-containing protein OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1 0 3 3 0.4903 0 1 1 1 365.88049 1095.62693 1095.62608 0.77 0.00028 0/0 0 0 21255804 HCD 30 MS2 58.03175 507.6 31.979 50.2525 13577 13577 13573 QEplus033719.raw F4 520.7 342.5 547.6 519.8 594.1 520.8 143 2.57 1 FALSE 0.001591 0.0247 0.246 -250 55930 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DHFEEAMR [R].dHFEEAMR.[F] N-Term(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 0 2 2 0.6106 0 1 1 1 632.30383 1263.60039 1263.59894 1.15 0.00073 0/0 0 0 20421160 HCD 30 MS2 29.17522 1072.8 110 50.255 13578 13578 13573 QEplus033719.raw F4 1134.1 910.5 1127.5 924.2 1245.3 1095.4 60 3.03 1 FALSE 1.14E-05 0.0008706 0.674 -250 55939 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQMSER [R].lQMSER.[SN] N-Term(TMT6plex) 15 Q5DTP7 DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Chd4 PE=2 SV=1 E9PYU4; B1AR17; E9Q614; Q5DTP7; Q7TML9; E9QAS5; Q8K0T3; Q6PDQ2; Q3UFM8; A2A8L1; Q4QQN1; E9PYL1; Q99JM0; F7C528; E9QAS4 DNA helicase OS=Mus musculus OX=10090 GN=Chd5 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Chd3 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Chd3 PE=1 SV=1; DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Chd4 PE=2 SV=1; Chd3 protein OS=Mus musculus OX=10090 GN=Chd3 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1; Chd3 protein OS=Mus musculus OX=10090 GN=Chd3 PE=2 SV=1; Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1; CHDCT2 domain-containing protein OS=Mus musculus OX=10090 GN=Chd4 PE=2 SV=1; Chromodomain-helicase-DNA-binding protein 5 OS=Mus musculus OX=10090 GN=Chd5 PE=1 SV=1; Chd5 protein OS=Mus musculus OX=10090 GN=Chd5 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Chd5 PE=1 SV=1; Chd4 protein (Fragment) OS=Mus musculus OX=10090 GN=Chd4 PE=2 SV=1; DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Chd3 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1 0 2 2 0.3209 0 1 1 1 496.77466 992.54204 992.53963 2.43 0.0012 0/0 0 0 16154240 HCD 30 MS2 69.40129 1203.4 78.56 50.2573 13579 13579 13573 QEplus033719.raw F4 1384.7 1089.6 1217.6 847.9 1363 1317.7 251 1.87 1 FALSE 0.0023 0.04529 0.157 -250 55949 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMAAEAEAAR [R].aMAAEAEAAR.[E] N-Term(TMT6plex) 2 P54116 Stomatin OS=Mus musculus OX=10090 GN=Stom PE=1 SV=3 P54116; Q8BPA1 Stomatin OS=Mus musculus OX=10090 GN=Stom PE=1 SV=3; PHB domain-containing protein OS=Mus musculus OX=10090 GN=Stom PE=2 SV=1 0 2 2 0.5547 0 1 1 1 610.31842 1219.62956 1219.63024 -0.55 -0.00034 0/0 0 0 15021954 HCD 30 MS2 53.6627 1397.3 78.759 50.2596 13580 13580 13573 QEplus033719.raw F4 2070.8 504.1 929.2 2562.2 587.2 1730.4 192 2.65 1 FALSE 1.14E-05 1.47E-07 1.395 -250 55959 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEDPVK [K].eEDPVk.[K] N-Term(TMT6plex); K6(TMT6plex) 5 Q544Z3 S1 protein D2 OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1 Q9D6G1; Q80XR6; Q544Z3; Q20BD0; Q3TMZ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; S1 protein D2 OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1 0 2 2 0.2773 0 1 1 1 587.84058 1174.67388 1174.67197 1.62 0.00095 0/0 0 0 11566606 HCD 30 MS2 36.17915 1272.8 110 50.2621 13581 13581 13573 QEplus033719.raw F4 1609.6 917.6 1233.8 956.5 1734.5 1184.9 399 2.2 1 FALSE 0.003793 0.0718 0.083 -250 55966 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTIQQVSQR [R].dTIQQVSQR.[E] N-Term(TMT6plex) 6 E9Q0A7 Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=1 Q4KMM3-2; Q4KMM3-4; Q4KMM3-3; E9Q0A7; A0A2R8W6N3; Q4KMM3 Isoform 2 of Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1; Isoform 4 of Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1; Isoform 3 of Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1; Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=1; Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=1; Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=3 0 2 2 0.5426 0 1 1 1 652.36279 1303.71831 1303.71674 1.2 0.00078 0/0 0 0 9692740 HCD 30 MS2 25.35738 591.5 110 50.2646 13582 13582 13573 QEplus033719.raw F4 574.5 528 639.7 502.5 702 602 364 3.17 1 FALSE 1.14E-05 1.15E-05 1.036 -250 55982 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTEDEVEK [K].gTEDEVEk.[Y] N-Term(TMT6plex); K8(TMT6plex) 8 P58774; A2AIM4; P58774-2 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 Q9D1R6; Q91VH3; P58774; A2AIM4; Q3SX28; P58774-2; A2AIM5; Q61344 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=8; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1 0 2 2 0.1827 0 1 1 1 682.86951 1364.73174 1364.73095 0.58 0.0004 0/0 0 0 17341720 HCD 30 MS2 8.754974 892 110 50.2769 13586 13586 13584 QEplus033719.raw F4 963.5 342.2 888.4 1157.2 636.3 1364.6 315 3.12 3 TRUE 1.14E-05 0.0002529 0.78 -250 55999 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDTSGDYKK [K].gDTSGDYkk.[A] N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex) 1 P48036 Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 P48036 Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 1 3 3 0.5642 0 1 1 1 553.31763 1657.93833 1657.93641 1.16 0.00064 0/0 0 0 27537538 HCD 30 MS2 31.00718 1375.7 58.576 50.2814 13588 13588 13584 QEplus033719.raw F4 2901.9 911 1537 1056.9 637 1210.4 386 1.79 1 FALSE 2.26E-05 0.001074 0.656 -250 56013 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQLDEK [K].qQLDEk.[L] N-Term(TMT6plex); K6(TMT6plex) 5 Q5SX40; Q5SX39; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q5SX40; Q5SX39; B2RWX0; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.2255 0 1 1 1 609.85956 1218.71184 1218.70942 1.98 0.00121 0/0 0 0 21589498 HCD 30 MS2 40.93122 908.7 43.079 50.2862 13590 13590 13584 QEplus033719.raw F4 1410.4 294.9 560 1730.2 354.5 1102.1 484 2.04 3 FALSE 0.004832 0.08449 0.049 -250 56020 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGVQYK [K].sGVQYk.[G] N-Term(TMT6plex); K6(TMT6plex) 2 Q8BK64 Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Mus musculus OX=10090 GN=Ahsa1 PE=1 SV=2 Q8BK64; Q3TL79 Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Mus musculus OX=10090 GN=Ahsa1 PE=1 SV=2; Aha1_N domain-containing protein OS=Mus musculus OX=10090 GN=Ahsa1 PE=2 SV=1 0 2 2 0.3607 0 1 1 1 570.34503 1139.68279 1139.68248 0.27 0.00015 0/0 0 0 16622347 HCD 30 MS2 22.65071 1681.1 110 50.2887 13591 13591 13584 QEplus033719.raw F4 1898.8 1267.6 1713.1 1603.3 2002.7 1601 155 2.19 1 FALSE 0.006477 0.1039 -0.004 -250 56049 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPDQQLQGDGK [R].rPDQQLQGDGk.[L] N-Term(TMT6plex); K11(TMT6plex) 13 A0A0N4SV32 Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1 A0A0N4SUQ1; A0A0N4SV40; A0A0N4SV32; Q9CY58-3; A0A0N4SUN8; Q9CY58-4; A0A0N4SWH2; Q3V274; A0A0N4SVK5; Q3UJK2; Q9CY58; Q9CY58-2; Q3UMP4 Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Isoform 3 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Isoform 4 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; HABP4_PAI-RBP1 domain-containing protein OS=Mus musculus OX=10090 GN=Serbp1 PE=2 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; HABP4_PAI-RBP1 domain-containing protein OS=Mus musculus OX=10090 GN=Serbp1 PE=2 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=2; Isoform 2 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1 0 2 2 0.7543 0 1 1 1 850.4798 1699.95232 1699.94915 1.86 0.00158 0/0 0 0 9460859 HCD 30 MS2 0 374.4 110 50.296 13594 13594 13584 QEplus033719.raw F4 365.5 295.6 405.2 301.8 435.5 442.5 420 3.5 1 FALSE 1.14E-05 6.72E-09 1.65 -250 56055 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVQASQESEAR [K].iVQASQESEAR.[V] N-Term(TMT6plex) 5 Q8BJS4 SUN domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sun2 PE=1 SV=3 Q8BJS4; Q8BJS4-3; Q6A022; Q8BJS4-2; Q4QQM3 SUN domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sun2 PE=1 SV=3; Isoform 3 of SUN domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sun2; MKIAA0668 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0668 PE=4 SV=1; Isoform 2 of SUN domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sun2; Unc84b protein OS=Mus musculus OX=10090 GN=Sun2 PE=2 SV=1 0 2 2 0.6705 0 1 1 1 723.89215 1446.77703 1446.77499 1.41 0.00102 0/0 0 0 11593661 HCD 30 MS2 0 488.8 110 50.3033 13596 13596 13595 QEplus033719.raw F4 450.6 468.7 538.2 410.5 567.3 497.7 323 4.37 1 FALSE 1.14E-05 2.82E-09 1.722 -250 56069 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VPVTQATR [K].vPVTQATR.[G] N-Term(TMT6plex) 3 E9Q1S3 Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23a PE=1 SV=1 E9Q1S3; Q8C1E4; Q01405 Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23a PE=1 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23a PE=2 SV=1; Protein transport protein Sec23A OS=Mus musculus OX=10090 GN=Sec23a PE=1 SV=2 0 2 2 0.5333 0 1 1 1 550.83557 1100.66387 1100.66252 1.22 0.00067 0/0 0 0 51825152 HCD 30 MS2 9.118706 477.7 26.619 50.3081 13598 13598 13595 QEplus033719.raw F4 492.1 395.5 488.6 425.6 544.7 519.4 272 2.55 1 FALSE 5.44E-05 0.001998 0.599 -250 56079 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YHTINGHNCEVK [K].yHTINGHNcEVk.[K] N-Term(TMT6plex); C9(Carbamidomethyl); K12(TMT6plex) 10 Q5FB19 Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1 Q8BG05-2; Q5U3M2; Q58E39; Q6PFA7; Q3UZG3; Q5FB19; B2RXM2; A2AL12; Q6P6I7; A2AL13 Isoform 2 of Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3; Hnrpa3 protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Hnrpa3 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Hnrpa3 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; EG627828 protein OS=Mus musculus OX=10090 GN=Gm6793 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1; Hnrpa3 protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A3 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1 0 4 4 0.6741 0 1 1 1 483.25565 1930.00075 1930.00054 0.11 0.00005 0/0 0 0 21667826 HCD 30 MS2 84.77215 602.8 32.005 50.3104 13599 13599 13595 QEplus033719.raw F4 673 529.5 660.9 539.3 633.9 580.1 297 4.94 1 FALSE 1.14E-05 1.08E-07 1.421 -250 56086 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRPVNQNK [R].lRPVNQNk.[T] N-Term(TMT6plex); K8(TMT6plex) 9 Q61584 Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1 PE=1 SV=2 Q61584; Q61584-5; Q61584-3; A0A0H2UH27; A0A0G2JEP0; Q61584-6; Q61584-4; Q61584-2; Q61584-7 Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1 PE=1 SV=2; Isoform D of Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1; Isoform B of Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1; Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1 PE=1 SV=1; Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1 PE=1 SV=1; Isoform F of Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1; Isoform C of Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1; Isoform A of Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1; Isoform G of Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1 0 3 3 0.5982 0 1 1 1 476.30164 1426.89035 1426.88945 0.63 0.0003 0/0 0 0 19273408 HCD 30 MS2 3.356761 1070.1 75.126 50.3126 13600 13600 13595 QEplus033719.raw F4 940.4 705.4 1268.6 1151.5 951.5 1402.9 212 3.36 1 FALSE 0.001301 0.01766 0.303 -250 56096 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DFNEECPR [R].dFNEEcPR.[L] N-Term(TMT6plex); C6(Carbamidomethyl) 2 O55222 Integrin-linked protein kinase OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2 O55222; D3YZA5 Integrin-linked protein kinase OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2; Integrin-linked protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2 0 2 2 0.6897 0 1 1 1 648.29852 1295.58977 1295.58877 0.77 0.0005 0/0 0 0 10302550 HCD 30 MS2 0 587 110 50.3176 13602 13602 13595 QEplus033719.raw F4 588 584.5 675.2 488.2 645.5 540.3 35 3.19 1 FALSE 0.0001813 0.003989 0.527 -250 56127 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGVRPSQGGEAPR [K].lGVRPSQGGEAPR.[E] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.5326 0 1 1 1 518.29749 1552.8779 1552.8757 1.42 0.00073 0/0 0 0 46995148 HCD 30 MS2 12.92141 485.1 32.097 50.3344 13608 13608 13606 QEplus033719.raw F4 533.4 399.2 556.3 545 364.5 512.1 407 4.6 3 FALSE 1.14E-05 8.65E-07 1.249 -250 56132 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYAEAVGR [K].kYAEAVGR.[A] N-Term(TMT6plex); K1(TMT6plex) 1 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 1 3 3 0.4845 0 1 1 1 451.27347 1351.80585 1351.80981 -2.93 -0.00132 0/0 0 0 238956016 HCD 30 MS2 32.52295 641.4 3.56 50.3367 13609 13609 13606 QEplus033719.raw F4 629.8 527.7 688.5 654.3 722.5 625.6 324 1.94 1 FALSE 0.007862 0.1297 -0.059 -250 56138 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIEVGGGR [K].eIEVGGGR.[K] N-Term(TMT6plex) 1 Q4FZE6 40S ribosomal protein S7 OS=Mus musculus OX=10090 GN=Rps7 PE=2 SV=1 Q4FZE6 40S ribosomal protein S7 OS=Mus musculus OX=10090 GN=Rps7 PE=2 SV=1 0 2 2 0.2366 0 1 1 1 523.29639 1045.5855 1045.58394 1.49 0.00078 0/0 0 0 133188056 HCD 30 MS2 52.79829 634 5.85 50.3389 13610 13610 13606 QEplus033719.raw F4 616.3 628.9 734.5 483 740.4 601 378 2.24 1 FALSE 5.44E-05 0.001947 0.601 -250 56148 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVMVDDR [K].eVMVDDR.[L] N-Term(TMT6plex) 3 Q4FJQ0 Rab7 OS=Mus musculus OX=10090 GN=Rab7 PE=1 SV=1 A0A0N4SVG9; Q4FJQ0; A0A0N4SVR6 "RAB7, member RAS oncogene family (Fragment) OS=Mus musculus OX=10090 GN=Rab7 PE=1 SV=3; Rab7 OS=Mus musculus OX=10090 GN=Rab7 PE=1 SV=1; RAB7, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab7 PE=1 SV=1" 0 2 2 0.4805 0 1 1 1 546.78223 1092.55718 1092.55568 1.37 0.00075 0/0 0 0 85627736 HCD 30 MS2 20.29389 635.8 13.292 50.3412 13611 13611 13606 QEplus033719.raw F4 729.5 511.4 722.8 535.1 574.4 741.7 182 2.56 1 FALSE 0.0003996 0.007201 0.454 -250 56153 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTNPNFVR [R].nTNPNFVR.[C] N-Term(TMT6plex) 8 Q5SV64; Q8VDD5 Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q80T68; Q8BLI3; Q8BWI3; Q5SV64; Q3UH59; Q8VDD5; Q8BLI1; Q61879 MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 0 2 2 0.5887 0 1 1 1 595.82837 1190.64946 1190.64794 1.28 0.00076 0/0 0 0 56493036 HCD 30 MS2 31.82918 702.1 23.594 50.3435 13612 13612 13606 QEplus033719.raw F4 720.4 661.1 818.2 501.7 833.1 677.9 331 2.82 2 FALSE 5.44E-05 0.002095 0.594 -250 56161 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAYVHK [K].eAYVHk.[S] N-Term(TMT6plex); K6(TMT6plex) 4 Q9CQL1 Protein mago nashi homolog 2 OS=Mus musculus OX=10090 GN=Magohb PE=2 SV=1 Q9CQL1; P61327; A0A023T778; G3UZW7 Protein mago nashi homolog 2 OS=Mus musculus OX=10090 GN=Magohb PE=2 SV=1; Protein mago nashi homolog OS=Mus musculus OX=10090 GN=Magoh PE=2 SV=1; Mago nashi protein OS=Mus musculus OX=10090 GN=Magohb PE=1 SV=1; Protein mago nashi homolog 2 OS=Mus musculus OX=10090 GN=Magohb PE=3 SV=1 0 3 3 0.4652 0 1 1 1 402.24194 1204.71128 1204.70903 1.87 0.00075 0/0 0 0 40467532 HCD 30 MS2 43.11507 555.6 26.698 50.3457 13613 13613 13606 QEplus033719.raw F4 622.7 404 566.3 505.1 666.9 568.8 466 2.73 1 FALSE 0.0004793 0.007657 0.445 -250 56176 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYVDPSTDER [R].sYVDPSTDER.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.6337 0 1 1 1 699.33942 1397.67156 1397.6746 -2.18 -0.00152 0/0 0 0 23107340 HCD 30 MS2 22.29566 494.5 70.419 50.3502 13615 13615 13606 QEplus033719.raw F4 536.1 451.2 527 462.6 501.2 488.9 83 4.15 2 FALSE 1.14E-05 1.11E-06 1.229 -250 56184 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSQYWR [K].gSQYWR.[YF] N-Term(TMT6plex) 4 Q3ZBS7; P29788 TREMBL:Q3ZBS7 (Bos taurus) Vitronectin;Vitronectin OS=Mus musculus OX=10090 GN=Vtn PE=1 SV=2 Q3KP73; Q3ZBS7; P29788; Q08EI4 Matrix metallopeptidase 21 OS=Mus musculus OX=10090 GN=Mmp21 PE=2 SV=1; TREMBL:Q3ZBS7 (Bos taurus) Vitronectin; Vitronectin OS=Mus musculus OX=10090 GN=Vtn PE=1 SV=2; Mmp21 protein OS=Mus musculus OX=10090 GN=Mmp21 PE=2 SV=1 0 2 2 0.6119 0 1 1 1 513.27271 1025.53813 1025.5366 1.5 0.00077 0/0 0 0 21536282 HCD 30 MS2 6.300682 1000.7 71.06 50.3525 13616 13616 13606 QEplus033719.raw F4 842.7 818.6 1209.9 842 1155.1 1136.2 105 2.19 2 TRUE 0.005197 0.08893 0.037 -250 56194 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQASAPAQAPK [K].aQASAPAQAPk.[G] N-Term(TMT6plex); K11(TMT6plex) 1 P47915 60S ribosomal protein L29 OS=Mus musculus OX=10090 GN=Rpl29 PE=1 SV=2 P47915 60S ribosomal protein L29 OS=Mus musculus OX=10090 GN=Rpl29 PE=1 SV=2 0 3 3 0.6177 0 1 1 1 499.96484 1497.87998 1497.87895 0.69 0.00034 0/0 0 0 36585036 HCD 30 MS2 30.50356 1021.8 61.91 50.3598 13618 13618 13617 QEplus033719.raw F4 1000.8 863.1 1126.1 893.7 1106 1141 362 3.95 1 FALSE 1.14E-05 6.60E-07 1.272 -250 56202 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GKLPEEAR [K].gkLPEEAR.[K] N-Term(TMT6plex); K2(TMT6plex) 3 P06745 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4 P06745; A0A0U1RP97; A0A0U1RQ18 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4; Glucose-6-phosphate isomerase 1 (Fragment) OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase (Fragment) OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1 1 2 2 0.4368 0 1 1 1 679.41473 1357.82219 1357.82037 1.34 0.00091 0/0 0 0 8197536.5 HCD 30 MS2 9.451954 368.1 110 50.3623 13619 13619 13617 QEplus033719.raw F4 330.1 281.2 394.7 421.5 293 488 290 1.9 1 FALSE 0.001632 0.02658 0.235 -250 56216 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAAEVLQNNRR [K].eAAEVLQNNRR.[L] N-Term(TMT6plex) 5 P61082 NEDD8-conjugating enzyme Ubc12 OS=Mus musculus OX=10090 GN=Ube2m PE=1 SV=1 F6WMC0; P61082; Q8R352; G5E919; F7CDT0 NEDD8-conjugating enzyme Ubc12 (Fragment) OS=Mus musculus OX=10090 GN=Ube2m PE=1 SV=1; NEDD8-conjugating enzyme Ubc12 OS=Mus musculus OX=10090 GN=Ube2m PE=1 SV=1; Ube2m protein OS=Mus musculus OX=10090 GN=Ube2m PE=2 SV=1; NEDD8-conjugating enzyme Ubc12 OS=Mus musculus OX=10090 GN=Ube2m PE=1 SV=1; NEDD8-conjugating enzyme Ubc12 (Fragment) OS=Mus musculus OX=10090 GN=Ube2m PE=1 SV=1 1 3 3 0.6552 0 1 1 1 510.28531 1528.84137 1528.83932 1.34 0.00068 0/0 0 0 49270148 HCD 30 MS2 39.8886 946.9 38.066 50.3668 13621 13621 13617 QEplus033719.raw F4 1544 789.7 1025 497.2 784.7 1040.6 401 3.77 1 FALSE 1.14E-05 2.45E-09 1.733 -250 56229 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVQPEGPYR [K].qVQPEGPYR.[I] N-Term(TMT6plex) 3 Q3UHT6 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1 Q3UHT6; P19096; A0A0U1RNJ1 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=1 0 2 2 0.6132 0 1 1 1 651.85474 1302.7022 1302.70037 1.4 0.00092 0/0 0 0 19947372 HCD 30 MS2 6.52456 804.7 110 50.3716 13623 13623 13617 QEplus033719.raw F4 743.3 758.4 901.5 641.7 937.3 845.7 318 3.18 1 FALSE 5.44E-05 0.00174 0.612 -250 56239 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQASAPAQAPK [K].aQASAPAQAPk.[G] N-Term(TMT6plex); K11(TMT6plex) 1 P47915 60S ribosomal protein L29 OS=Mus musculus OX=10090 GN=Rpl29 PE=1 SV=2 P47915 60S ribosomal protein L29 OS=Mus musculus OX=10090 GN=Rpl29 PE=1 SV=2 0 2 2 0.757 0 1 1 1 749.44391 1497.88054 1497.87895 1.06 0.0008 0/0 0 0 13171257 HCD 30 MS2 0 485.5 110 50.3741 13624 13624 13617 QEplus033719.raw F4 497.2 450.5 543.6 352.5 577.2 491.9 374 4.28 1 FALSE 1.14E-05 3.48E-10 1.894 -250 56258 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVHTEWTQR [R].tVHTEWTQR.[D] N-Term(TMT6plex) 4 A0A0R4J107 Acyl-peptide hydrolase (Fragment) OS=Mus musculus OX=10090 GN=Apeh PE=1 SV=1 A0A0R4J107; Q8R146; Q8R146-2; A0A0A6YXV0 Acyl-peptide hydrolase (Fragment) OS=Mus musculus OX=10090 GN=Apeh PE=1 SV=1; Acylamino-acid-releasing enzyme OS=Mus musculus OX=10090 GN=Apeh PE=1 SV=3; Isoform 2 of Acylamino-acid-releasing enzyme OS=Mus musculus OX=10090 GN=Apeh; Acylamino-acid-releasing enzyme (Fragment) OS=Mus musculus OX=10090 GN=Apeh PE=1 SV=1 0 3 3 0.5876 0 1 1 1 462.91614 1386.73386 1386.73273 0.82 0.00038 0/0 0 0 8127290.5 HCD 30 MS2 26.11832 728.2 110 50.3791 13626 13626 13617 QEplus033719.raw F4 994.6 429.7 776.5 767.8 650 750.5 233 3.71 1 FALSE 0.0001707 0.003862 0.531 -250 56264 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HPELADK [K].hPELADk.[N] N-Term(TMT6plex); K7(TMT6plex) 6 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" A0A338P731; P63325; Q3UW83; A0A338P7K4; Q3U9P0; A0A3B2W864 "40S ribosomal protein S10 (Fragment) OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; S10_plectin domain-containing protein OS=Mus musculus OX=10090 GN=Rps10 PE=2 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 0 2 2 0.4843 0 1 1 1 634.37689 1267.74651 1267.74106 4.3 0.00273 0/0 0 0 4540208 HCD 30 MS2 44.19761 878.5 110 50.3816 13627 13627 13617 QEplus033719.raw F4 1032.1 694.5 887 720.4 1030.4 906.7 274 2.23 2 FALSE 0.001591 0.02444 0.248 -250 56273 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GKLPEEAR [K].gkLPEEAR.[K] N-Term(TMT6plex); K2(TMT6plex) 3 P06745 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4 P06745; A0A0U1RP97; A0A0U1RQ18 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4; Glucose-6-phosphate isomerase 1 (Fragment) OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase (Fragment) OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1 1 3 3 0.5 0 1 1 1 453.2785 1357.82096 1357.82037 0.43 0.0002 0/0 0 0 119110704 HCD 30 MS2 10.26737 825.3 12.266 50.3889 13629 13629 13628 QEplus033719.raw F4 830.4 546.6 861.2 919.7 605.8 1188 283 2.36 1 FALSE 0.002079 0.03888 0.179 -250 56280 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTAINAR [R].vTAINAR.[G] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.4067 0 1 1 1 487.30396 973.60063 973.5992 1.48 0.00072 0/0 0 0 27657338 HCD 30 MS2 47.16854 1020.7 43.324 50.3912 13630 13630 13628 QEplus033719.raw F4 1284.7 591.9 921.5 1338.6 675.2 1312.3 109 2.09 2 FALSE 0.001506 0.02186 0.266 -250 56290 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HPELADK [K].hPELADk.[N] N-Term(TMT6plex); K7(TMT6plex) 6 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" A0A338P731; P63325; Q3UW83; A0A338P7K4; Q3U9P0; A0A3B2W864 "40S ribosomal protein S10 (Fragment) OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; S10_plectin domain-containing protein OS=Mus musculus OX=10090 GN=Rps10 PE=2 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 0 3 3 0.5059 0 1 1 1 423.25201 1267.74149 1267.74106 0.34 0.00014 0/0 0 0 135684848 HCD 30 MS2 22.06631 547.2 8.885 50.3935 13631 13631 13628 QEplus033719.raw F4 629 420.3 543.7 428.9 626.2 634.9 355 3.4 2 FALSE 1.14E-05 0.0001099 0.849 -250 56299 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAVTEGCQPSR [K].vAVTEGcQPSR.[V] N-Term(TMT6plex); C7(Carbamidomethyl) 1 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 0 2 2 0.7857 0 1 1 1 716.87506 1432.74285 1432.74158 0.88 0.00063 0/0 0 0 34220148 HCD 30 MS2 16.23978 548.8 53.203 50.3957 13632 13632 13628 QEplus033719.raw F4 541.4 601.9 565.1 380.7 757.8 445.7 241 3.78 1 FALSE 1.14E-05 8.52E-08 1.44 -250 56307 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGAQASSTPLSPTR [R].sGAQASSTPLSPTR.[I] N-Term(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 D3YUF7; P48678; P48678-2 Prelamin-A/C (Fragment) OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=1; Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 0 2 2 0.7189 0 1 1 1 794.92944 1588.85161 1588.84921 1.51 0.0012 0/0 0 0 15673159 HCD 30 MS2 0 439.4 110 50.4005 13634 13634 13628 QEplus033719.raw F4 473.3 411.6 471.8 341.6 536.8 401.3 343 4.98 1 FALSE 1.14E-05 2.43E-13 2.493 -250 56319 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPMTSQK [K].tPMTSQk.[T] N-Term(TMT6plex); K7(TMT6plex) 1 Q61425 "Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Hadh PE=1 SV=2" Q61425 "Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Hadh PE=1 SV=2" 0 2 2 0.4069 0 1 1 1 625.86212 1250.71697 1250.71788 -0.73 -0.00046 0/0 0 0 13001475 HCD 30 MS2 15.24539 1143 110 50.4055 13636 13636 13628 QEplus033719.raw F4 1444.8 892.4 1199.3 1099.2 1211 1011.3 389 2.04 1 FALSE 0.004658 0.0822 0.056 -250 56329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGLSHSLRK [R].gGLSHSLRk.[Q] N-Term(TMT6plex); K9(TMT6plex) 3 Q7TPU5 "TBC1 domain family, member 15 OS=Mus musculus OX=10090 GN=Tbc1d15 PE=2 SV=1" Q7TPU5; Q9CXF4; Q4TVN0 "TBC1 domain family, member 15 OS=Mus musculus OX=10090 GN=Tbc1d15 PE=2 SV=1; TBC1 domain family member 15 OS=Mus musculus OX=10090 GN=Tbc1d15 PE=1 SV=1; TBC1 domain family member 15 OS=Mus musculus OX=10090 GN=Tbc1d15 PE=2 SV=1" 1 4 4 0.45 0 1 1 1 353.97394 1412.87392 1412.8738 0.08 0.00003 0/0 0 0 4057212 HCD 30 MS2 20.48712 425.3 110 50.408 13637 13637 13628 QEplus033719.raw F4 517.5 350.8 439.8 326.3 509.6 408.1 231 3 1 FALSE 0.0002719 0.005379 0.492 -250 56345 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRVDSTAK [R].vRVDSTAk.[V] N-Term(TMT6plex); K8(TMT6plex) 2 Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 Q9JJD8; Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=2 SV=1; CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 1 3 3 0.5846 0 1 1 1 445.27838 1333.82059 1333.82037 0.17 0.00007 0/0 0 0 84564400 HCD 30 MS2 26.63929 611.3 11.52 50.4178 13640 13640 13639 QEplus033719.raw F4 672.3 458 694 552.9 713.8 576.9 288 3.37 1 FALSE 0.00198 0.0344 0.196 -250 56353 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FYAGGSER [R].fYAGGSER.[S] N-Term(TMT6plex) 5 Q3UVN5 NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1 Q3KQQ1; Q9CZ44-2; Q3UVN5; Q9CZ44; A2AT02 NSFL1 cofactor p47 (Fragment) OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1; Isoform 2 of NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=1 SV=1; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=1 SV=1 0 2 2 0.5625 0 1 1 1 558.28857 1115.56987 1115.56829 1.42 0.00079 0/0 0 0 15640176 HCD 30 MS2 15.27767 560.6 91.877 50.4201 13641 13641 13639 QEplus033719.raw F4 458.2 478.4 656.2 486.3 590.1 694.4 74 2.88 1 FALSE 5.44E-05 0.002635 0.571 -250 56370 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IIAHTQMR [R].iIAHTQMR.[L] N-Term(TMT6plex) 6 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB15; Q3UB90; Q3U9L3; Q3T9U9; P27659 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3 0 3 3 0.6503 0 1 1 1 400.23615 1198.69388 1198.69278 0.92 0.00037 0/0 0 0 97825144 HCD 30 MS2 32.45546 300.5 8.495 50.4246 13643 13643 13639 QEplus033719.raw F4 287 253.9 338.3 246 350.3 327.7 230 3.66 1 FALSE 3.35E-05 0.001255 0.642 -250 56390 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSTPEEVK [K].sSTPEEVk.[K] N-Term(TMT6plex); K8(TMT6plex) 4 P18760 Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3 Q9CX22; A0A494B9A7; P18760; F8WGL3 "Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=2 SV=1; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1; Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1" 0 2 2 0.4107 0 1 1 1 667.88495 1334.76262 1334.75677 4.39 0.00293 0/0 0 0 70781480 HCD 30 MS2 4.697837 1052.9 20.538 50.4291 13645 13645 13639 QEplus033719.raw F4 1201.8 844.3 1101 925.1 1335.3 909.7 546 2.24 1 FALSE 0.001778 0.03029 0.215 -250 56408 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMIIDRR [K].sMIIDRR.[S] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.3529 0 1 1 1 373.88882 1119.65192 1119.65058 1.2 0.00045 0/0 0 0 17712314 HCD 30 MS2 27.80196 695.3 55.052 50.4336 13647 13647 13639 QEplus033719.raw F4 705.6 611.6 748.1 573.5 752 780.8 256 3.23 2 FALSE 1.14E-05 0.0001806 0.808 -250 56418 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEVYSR [K].vEVYSR.[S] N-Term(TMT6plex) 6 Q922R9 Trap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1 Q3TSG8; Q922R9; Q3UPJ8; Q9CQN1; Q3TK29; Q922Z3 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; Trap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; Heat shock protein 75 kDa, mitochondrial OS=Mus musculus OX=10090 GN=Trap1 PE=1 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; Trap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1" 0 2 2 0.175 0 1 1 1 491.28177 981.55626 981.55666 -0.41 -0.0002 0/0 0 0 12943711 HCD 30 MS2 24.43177 1328.4 110 50.4361 13648 13648 13639 QEplus033719.raw F4 1561.4 1008.5 1293.5 1174.6 1465.3 1467.1 70 2 1 FALSE 0.005276 0.09021 0.034 -250 56424 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YSNSEVVTGSGR [R].ySNSEVVTGSGR.[Q] N-Term(TMT6plex) 5 Q7TMB8 Cytoplasmic FMR1-interacting protein 1 OS=Mus musculus OX=10090 GN=Cyfip1 PE=1 SV=1 Q7TMB8-2; Q8C8R2; A0A0R4J119; Q7TMB8; A0A0U1RQ05 Isoform 2 of Cytoplasmic FMR1-interacting protein 1 OS=Mus musculus OX=10090 GN=Cyfip1; DUF1394 domain-containing protein OS=Mus musculus OX=10090 GN=Cyfip1 PE=2 SV=1; Cytoplasmic FMR1-interacting protein OS=Mus musculus OX=10090 GN=Cyfip1 PE=1 SV=1; Cytoplasmic FMR1-interacting protein 1 OS=Mus musculus OX=10090 GN=Cyfip1 PE=1 SV=1; Cytoplasmic FMR1-interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Cyfip1 PE=1 SV=1 0 2 2 0.6799 0 1 1 1 742.88104 1484.75481 1484.75425 0.37 0.00028 0/0 0 0 8580465 HCD 30 MS2 0 291.6 110 50.4459 13651 13651 13650 QEplus033719.raw F4 278.5 287.1 349.7 241.4 321.3 271.8 167 4.03 1 FALSE 1.14E-05 3.33E-10 1.898 -250 56434 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSEVQQANLK [K].hSEVQQANLk.[A] N-Term(TMT6plex); K10(TMT6plex) 1 O55029 Coatomer subunit beta' OS=Mus musculus OX=10090 GN=Copb2 PE=1 SV=2 O55029 Coatomer subunit beta' OS=Mus musculus OX=10090 GN=Copb2 PE=1 SV=2 0 2 2 0.6067 0 1 1 1 806.46588 1611.92449 1611.92188 1.62 0.00131 0/0 0 0 3985925.75 HCD 30 MS2 0 255.3 110 50.4484 13652 13652 13650 QEplus033719.raw F4 266.2 240.7 269.9 199.8 299.9 255.1 428 4.45 1 FALSE 1.14E-05 4.87E-09 1.677 -250 56450 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDLENR [KR].vDLENR.[C] N-Term(TMT6plex) 4 P14733; A0A0R4J0Q5 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3;Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1 P14733; Q8C553; A0A0R4J0Q5; P21619 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3; IF rod domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Lmnb1 PE=2 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=2 0 2 2 0.1914 0 1 1 1 487.77762 974.54796 974.54683 1.16 0.00057 0/0 0 0 73483472 HCD 30 MS2 37.99837 766.8 14.612 50.4529 13654 13654 13650 QEplus033719.raw F4 819.3 620.5 758.5 835.4 698.1 869 261 2.56 2 FALSE 0.002352 0.04692 0.151 -250 56453 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSEVQQANLK [K].hSEVQQANLk.[A] N-Term(TMT6plex); K10(TMT6plex) 1 O55029 Coatomer subunit beta' OS=Mus musculus OX=10090 GN=Copb2 PE=1 SV=2 O55029 Coatomer subunit beta' OS=Mus musculus OX=10090 GN=Copb2 PE=1 SV=2 0 3 3 0.6191 0 1 1 1 537.97931 1611.92337 1611.92188 0.93 0.0005 0/0 0 0 67134648 HCD 30 MS2 5.78514 626.6 25.729 50.4552 13655 13655 13650 QEplus033719.raw F4 661.1 541.1 669.4 525.8 749.9 612.2 431 4.7 1 FALSE 1.14E-05 3.28E-08 1.519 -250 56460 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EALNSCNK [K].eALNScNk.[M] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 6 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 3 3 0.6458 0 1 1 1 465.25552 1393.75202 1393.75097 0.75 0.00035 0/0 0 0 34308000 HCD 30 MS2 30.83433 632.9 44.299 50.4574 13656 13656 13650 QEplus033719.raw F4 727.9 554.1 658.1 460.3 818.1 579.1 358 3.19 1 FALSE 4.43E-05 0.001642 0.617 -250 56467 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQHELEEAEER [K].aQHELEEAEER.[A] N-Term(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 0 2 2 0.7484 0 1 1 1 785.38947 1569.77165 1569.77063 0.65 0.00051 0/0 0 0 24243396 HCD 30 MS2 0 444.4 81.501 50.4597 13657 13657 13650 QEplus033719.raw F4 501.3 57.2 313.5 951 51.3 791.9 128 4.81 1 FALSE 1.14E-05 4.72E-10 1.869 -250 56476 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYDPQK [K].nYDPQk.[D] N-Term(TMT6plex); K6(TMT6plex) 8 Q5XJF6 Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1 P53026; Q5XJF6; A0A3B2W820; A0A3B2W824; Q3U561; D6RE43; A0A3B2WBL1; A0A3B2WCA5 60S ribosomal protein L10a OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=3; Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1; 60S ribosomal protein L10a OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1; 60S ribosomal protein L10a (Fragment) OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1; Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=2 SV=1; 60S ribosomal protein L10a OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1; Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1; 60S ribosomal protein L10a OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1 0 2 2 0.4107 0 1 1 1 611.84558 1222.68389 1222.68321 0.55 0.00034 0/0 0 0 17247622 HCD 30 MS2 9.649063 1293.1 110 50.4623 13658 13658 13650 QEplus033719.raw F4 1396.3 1088.2 1340.7 1130.1 1546.4 1257.2 354 2.8 1 FALSE 0.002157 0.04092 0.171 -250 56484 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAQQELK [K].sAQQELk.[Q] N-Term(TMT6plex); K7(TMT6plex) 4 A0A1B0GQX4 Small vasohibin-binding protein OS=Mus musculus OX=10090 GN=Svbp PE=3 SV=1 A0A1B0GQX4; A2A7Q0; A2A7P9; Q99LQ4 Small vasohibin-binding protein OS=Mus musculus OX=10090 GN=Svbp PE=3 SV=1; Small vasohibin-binding protein OS=Mus musculus OX=10090 GN=Svbp PE=3 SV=1; Small vasohibin-binding protein OS=Mus musculus OX=10090 GN=Svbp PE=1 SV=1; Small vasohibin-binding protein OS=Mus musculus OX=10090 GN=Svbp PE=1 SV=1 0 2 2 0.2419 0 1 1 1 631.38141 1261.75554 1261.75162 3.11 0.00196 0/0 0 0 14791407 HCD 30 MS2 5.831313 1053.1 110 50.4648 13659 13659 13650 QEplus033719.raw F4 1148.1 714.7 1415 889.5 922.6 1228.5 576 2.77 1 FALSE 0.0006035 0.008944 0.422 -250 56492 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EALEYQR [R].eALEYQR.[Q] N-Term(TMT6plex) 3 Q3UID0 SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=1 Q6PDG5-2; Q3UID0; Q6PDG5 Isoform 2 of SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2; SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=1; SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=2 0 2 2 0.4686 0 1 1 1 569.30872 1137.61016 1137.61015 0 0 0/0 0 0 14653916 HCD 30 MS2 6.098056 848.4 110 50.4673 13660 13660 13650 QEplus033719.raw F4 859 747.2 973.8 693.8 942.9 873.5 200 2.71 1 FALSE 0.0003408 0.006421 0.47 -250 56500 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FGGSYGGR [R].fGGSYGGR.[F] N-Term(TMT6plex) 2 A0A0R4J098 Zinc finger protein 326 OS=Mus musculus OX=10090 GN=Zfp326 PE=1 SV=1 A0A0R4J098; O88291 Zinc finger protein 326 OS=Mus musculus OX=10090 GN=Zfp326 PE=1 SV=1; DBIRD complex subunit ZNF326 OS=Mus musculus OX=10090 GN=Znf326 PE=1 SV=1 0 2 2 0.5402 0 1 1 1 515.27008 1029.53288 1029.53151 1.34 0.00069 0/0 0 0 8986625 HCD 30 MS2 32.55527 1037.1 106.743 50.4746 13662 13662 13661 QEplus033719.raw F4 1069.9 933.7 1125.1 839.5 1194.1 1060.5 72 2.24 1 FALSE 0.001421 0.02029 0.279 -250 56517 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQHELEEAEER [K].aQHELEEAEER.[A] N-Term(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 0 3 3 0.7849 0 1 1 1 523.92896 1569.77231 1569.77063 1.07 0.00056 0/0 0 0 180819584 HCD 30 MS2 18.90085 446.7 10.783 50.4793 13664 13664 13661 QEplus033719.raw F4 453.9 360.8 455.8 426.7 483.6 499.2 123 4.51 1 FALSE 1.14E-05 1.48E-08 1.585 -250 56534 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EALNSCNK [K].eALNScNk.[M] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 6 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 2 2 0.5355 0 1 1 1 697.37946 1393.75163 1393.75097 0.48 0.00033 0/0 0 0 81880064 HCD 30 MS2 5.470079 825.4 25.585 50.4839 13666 13666 13661 QEplus033719.raw F4 960.9 726.9 803.8 579.6 1243.6 637.4 364 2.82 1 FALSE 1.14E-05 0.0008453 0.677 -250 56552 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMEESIR [K].eMEESIR.[S] N-Term(TMT6plex) 2 Q3U518 Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=2 SV=1 Q3U518; O08795-2 Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=2 SV=1; Isoform 2 of Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh 0 2 2 0.4231 0 1 1 1 561.78693 1122.56658 1122.56624 0.3 0.00017 0/0 0 0 20526098 HCD 30 MS2 29.0834 1290.1 110 50.4909 13669 13669 13661 QEplus033719.raw F4 1290.2 1139.2 1445.7 1024.6 1469.7 1371 167 2.86 1 FALSE 0.001101 0.01427 0.342 -250 56558 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELQEQMSR [K].eLQEQMSR.[G] N-Term(TMT6plex) 3 A0A087WQS2 Basic leucine zipper and W2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1 A0A087WQS2; Q9CQC6; A0A087WPF9 Basic leucine zipper and W2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1; Basic leucine zipper and W2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1; Basic leucine zipper and W2 domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1 0 2 2 0.4662 0 1 1 1 625.32452 1249.64177 1249.6408 0.78 0.00048 0/0 0 0 18988036 HCD 30 MS2 35.77578 1144.3 110 50.4934 13670 13670 13661 QEplus033719.raw F4 1364.3 1016.4 1267.6 853.6 1320 1044.2 216 2.81 1 FALSE 5.44E-05 0.002256 0.587 -250 56563 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAVLNTEAR [R].nAVLNTEAR.[T] N-Term(TMT6plex) 2 Q8VCM8 Nicalin OS=Mus musculus OX=10090 GN=Ncln PE=1 SV=2 Q8VCM8; D3YU17 Nicalin OS=Mus musculus OX=10090 GN=Ncln PE=1 SV=2; Nicalin OS=Mus musculus OX=10090 GN=Ncln PE=1 SV=1 0 2 2 0.4485 0 1 1 1 608.84674 1216.6862 1216.68472 1.22 0.00074 0/0 0 0 12459723 HCD 30 MS2 19.73191 788.1 110 50.4959 13671 13671 13661 QEplus033719.raw F4 912.4 531.1 793.8 830.5 837.1 823.6 351 3.59 1 FALSE 1.14E-05 1.17E-06 1.225 -250 56569 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YGQNSDFTR [R].yGQNSDFTR.[A] N-Term(TMT6plex) 6 F8VQC1 Signal recognition particle subunit SRP72 OS=Mus musculus OX=10090 GN=Srp72 PE=1 SV=1 A0JLN1; Q3UZL8; E9Q740; F8VQC1; Q3UU23; A0PJ97 Srp72 protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1; Signal recognition particle subunit SRP72 OS=Mus musculus OX=10090 GN=Srp72 PE=1 SV=1; Signal recognition particle subunit SRP72 OS=Mus musculus OX=10090 GN=Srp72 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1; Srp72 protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1 0 2 2 0.6926 0 1 1 1 658.82593 1316.64458 1316.64324 1.01 0.00067 0/0 0 0 15837457 HCD 30 MS2 7.961903 720.2 110 50.5032 13673 13673 13672 QEplus033719.raw F4 726 653.4 795.9 612.7 781.1 751.9 76 2.7 1 FALSE 1.14E-05 0.0002518 0.78 -250 56583 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IIAHTQMR [R].iIAHTQMR.[L] N-Term(TMT6plex) 6 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB15; Q3UB90; Q3U9L3; Q3T9U9; P27659 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3 0 2 2 0.6785 0 1 1 1 599.85028 1198.69328 1198.69278 0.42 0.00025 0/0 0 0 68531064 HCD 30 MS2 2.324175 642.1 22.942 50.508 13675 13675 13672 QEplus033719.raw F4 619.8 579.8 760.7 531.6 660.1 700.9 224 3.11 1 FALSE 7.59E-05 0.00277 0.566 -250 56593 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AFGSGYR [R].aFGSGYR.[R] N-Term(TMT6plex) 8 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 0 2 2 0.4565 0 1 1 1 493.76709 986.5269 986.5257 1.22 0.0006 0/0 0 0 49301036 HCD 30 MS2 10.1875 785.2 27.741 50.5103 13676 13676 13672 QEplus033719.raw F4 671.3 706.6 930 660 873.7 869.7 60 2.3 1 FALSE 0.001134 0.01499 0.333 -250 56602 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLEGETAR [R].vLEGETAR.[F] N-Term(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.4591 0 1 1 1 552.31726 1103.62724 1103.6258 1.31 0.00072 0/0 0 0 39557060 HCD 30 MS2 40.97264 649.9 21.554 50.5125 13677 13677 13672 QEplus033719.raw F4 1234.9 181.9 504.8 890.8 172.4 914.6 310 2.57 2 FALSE 1.14E-05 0.0003967 0.742 -250 56611 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MNADNLSSR [R].mNADNLSSR.[K] N-Term(TMT6plex) 6 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; Q9JL91; A0A571BF46; A0A1B0GSF5; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 2 2 0.5976 0 1 1 1 618.81415 1236.62102 1236.6204 0.5 0.00031 0/0 0 0 14053057 HCD 30 MS2 7.418425 658.1 110 50.5151 13678 13678 13672 QEplus033719.raw F4 691.6 242.1 654.2 971.3 321 1068.7 166 3.28 1 FALSE 1.14E-05 1.60E-05 1.009 -250 56620 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSGGFGSTGKN [R].gSGGFGSTGkN.[-] N-Term(TMT6plex); K10(TMT6plex) 3 Q8VCG1 Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Mus musculus OX=10090 GN=Dut PE=1 SV=1 Q8VCG1; Q9JJ44; Q9CQ43 Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Mus musculus OX=10090 GN=Dut PE=1 SV=1; Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Mus musculus OX=10090 GN=Dut PE=2 SV=1; Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Mus musculus OX=10090 GN=Dut PE=1 SV=1 1 2 2 0.635 0 1 1 1 713.88879 1426.77031 1426.76906 0.87 0.00062 0/0 0 0 6952442 HCD 30 MS2 11.30101 501.4 110 50.5176 13679 13679 13672 QEplus033719.raw F4 524.2 502.4 367.9 257.5 1015.9 340.5 287 2.63 1 FALSE 1.14E-05 0.0002679 0.775 -250 56660 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASALGSDGVR [R].aSALGSDGVR.[V] N-Term(TMT6plex) 1 Q9WTI7-3 Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c Q9WTI7-3 Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c 0 2 2 0.5404 0 1 1 1 581.32538 1161.64348 1161.64252 0.83 0.00048 0/0 0 0 23460652 HCD 30 MS2 7.1438 1000.9 110 50.5344 13685 13685 13683 QEplus033719.raw F4 1027.9 954.5 1181.4 740.6 1027.3 1073.7 308 3.22 1 FALSE 1.14E-05 9.67E-07 1.24 -250 56674 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGAQASSTPLSPTR [R].sGAQASSTPLSPTR.[I] N-Term(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 D3YUF7; P48678; P48678-2 Prelamin-A/C (Fragment) OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=1; Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 0 3 3 0.7312 0 1 1 1 530.28839 1588.85062 1588.84921 0.88 0.00047 0/0 0 0 81287952 HCD 30 MS2 27.65505 331.9 17.356 50.5389 13687 13687 13683 QEplus033719.raw F4 328.8 293.1 393.1 294.3 320.1 361.9 347 5.32 1 FALSE 1.14E-05 7.08E-11 2.025 -250 56679 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQEEYEEK [K].tQEEYEEk.[K] N-Term(TMT6plex); K8(TMT6plex) 4 G3XA35 Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1 E9PYH0; G3XA35; Q62059; Q62059-2 Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=2; Isoform V1 of Versican core protein OS=Mus musculus OX=10090 GN=Vcan 0 2 2 0.5759 0 1 1 1 757.39465 1513.78203 1513.77862 2.25 0.0017 0/0 0 0 7180949.5 HCD 30 MS2 39.2209 549.3 110 50.5415 13688 13688 13683 QEplus033719.raw F4 551.4 421 533.3 727.4 454.1 608.5 196 3.16 1 FALSE 1.14E-05 0.0002039 0.798 -250 56693 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQGVMVGMGQK [R-].hQGVMVGmGQk.[D] N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3UCF8; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 3 3 0.3484 0 1 1 1 549.30359 1645.89621 1645.89184 2.66 0.00146 0/0 0 0 4412833 HCD 30 MS2 29.31721 446 110 50.5465 13690 13690 13683 QEplus033719.raw F4 574.9 371.7 473.3 319.8 500.5 435.9 379 5.08 4 FALSE 1.14E-05 1.14E-08 1.606 -250 56700 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYSSGGEDGYVR [K].sYSSGGEDGYVR.[I] N-Term(TMT6plex) 1 Q9QZD9 Eukaryotic translation initiation factor 3 subunit I OS=Mus musculus OX=10090 GN=Eif3i PE=1 SV=1 Q9QZD9 Eukaryotic translation initiation factor 3 subunit I OS=Mus musculus OX=10090 GN=Eif3i PE=1 SV=1 0 2 2 0.7249 0 1 1 1 753.35791 1505.70854 1505.70697 1.05 0.00079 0/0 0 0 3345113.75 HCD 30 MS2 30.86188 318.2 110 50.549 13691 13691 13683 QEplus033719.raw F4 308.5 293.8 372.5 265.2 358.5 310.5 55 3.89 1 FALSE 1.14E-05 1.03E-09 1.805 -250 56707 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISEQSDAK [K].iSEQSDAk.[L] N-Term(TMT6plex); K8(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 0 3 3 0.3803 0 1 1 1 445.92249 1335.7529 1335.75202 0.66 0.0003 0/0 0 0 38378204 HCD 30 MS2 48.47612 775 23.613 50.5513 13692 13692 13683 QEplus033719.raw F4 873.7 523.1 862.4 808.2 776.1 806.4 460 3.05 1 FALSE 0.001142 0.01531 0.329 -250 56712 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYHTDTTVK [RK].eYHTDTTVk.[F] N-Term(TMT6plex); K9(TMT6plex) 5 Q01320; Q64511 DNA topoisomerase 2-alpha OS=Mus musculus OX=10090 GN=Top2a PE=1 SV=2;DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2 Q01320; F6U5K2; Q8CCE5; Q64511; Q3TTG4 DNA topoisomerase 2-alpha OS=Mus musculus OX=10090 GN=Top2a PE=1 SV=2; DNA topoisomerase 2-beta (Fragment) OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=1; Toprim domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Top2a PE=2 SV=1; DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2; TOP4c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Top2a PE=2 SV=1 0 3 3 0.6314 0 1 1 1 517.95282 1551.84391 1551.84189 1.3 0.00067 0/0 0 0 14162937 HCD 30 MS2 61.0689 1057.4 102.215 50.5537 13693 13693 13683 QEplus033719.raw F4 1401.9 872.5 1077.6 843.5 1066.3 1082.5 368 3.12 2 FALSE 1.14E-05 0.0007226 0.691 -250 56726 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLLQNVH [R].hLLQNVH.[-] N-Term(TMT6plex) 2 Q4FK57 Ero1l protein OS=Mus musculus OX=10090 GN=Ero1a PE=1 SV=1 Q4FK57; Q4FJZ3 Ero1l protein OS=Mus musculus OX=10090 GN=Ero1a PE=1 SV=1; Ero1l protein OS=Mus musculus OX=10090 GN=Ero1a PE=2 SV=1 0 3 3 0.72 0 1 1 1 363.88391 1089.63718 1089.63664 0.49 0.00018 0/0 0 0 10180926 HCD 30 MS2 28.12426 349.6 90.363 50.5632 13696 13696 13694 QEplus033719.raw F4 459.9 254.7 349.7 352.6 308.2 372.2 237 3 1 FALSE 1.14E-05 7.77E-05 0.878 -250 56733 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THMQNIK [R].tHMQNIk.[D] N-Term(TMT6plex); K7(TMT6plex) 5 Q80UG5 Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 Q80UG5-3; Q80UG5; A2A6U3; Q80UG5-2; Q3TDR9 Isoform 3 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Isoform 2 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-type G domain-containing protein OS=Mus musculus OX=10090 GN=Septin9 PE=2 SV=1 0 3 3 0.183 0 1 1 1 443.92902 1329.7725 1329.77131 0.89 0.00039 0/0 0 0 123767888 HCD 30 MS2 25.93136 439.3 9.573 50.5655 13697 13697 13694 QEplus033719.raw F4 456 371.4 489.7 378.7 511.2 429 348 3.77 1 FALSE 6.52E-05 0.002716 0.568 -250 56750 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AREESWGPPR [K].aREESWGPPR.[E] N-Term(TMT6plex) 1 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 1 3 3 0.6382 0 1 1 1 471.92029 1413.74631 1413.74363 1.9 0.00089 0/0 0 0 18120654 HCD 30 MS2 27.68074 740.8 86.704 50.57 13699 13699 13694 QEplus033719.raw F4 725.2 647.7 797 582.6 918.7 773.3 210 3.87 1 FALSE 1.14E-05 8.41E-05 0.871 -250 56770 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STVDPPAPSAGR [R].sTVDPPAPSAGR.[G] N-Term(TMT6plex) 7 Q8C5Q5 T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1 Q3TET0; Q3UIJ0; Q8C5Q5; A0A0N4SV00; Q3TJN2; Q3THH8; P80313 T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=1 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=1 SV=1 0 3 3 0.5484 0 1 1 1 461.92023 1383.74613 1383.74296 2.29 0.00106 0/0 0 0 5830932.5 HCD 30 MS2 62.36361 696.2 110 50.5774 13702 13702 13694 QEplus033719.raw F4 982.4 422.4 710.2 681.1 647.9 733.1 264 2.79 1 FALSE 1.14E-05 7.30E-06 1.073 -250 56789 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGVMGPPGNR [R].aGVMGPPGNR.[G] N-Term(TMT6plex) 4 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.5779 0 1 1 1 592.82513 1184.64299 1184.64074 1.9 0.00112 0/0 0 0 55892832 HCD 30 MS2 40.02602 641.8 18.143 50.5895 13706 13706 13705 QEplus033719.raw F4 579.2 703.5 786.5 311.5 817.3 653.1 139 2.89 1 FALSE 1.14E-05 7.93E-06 1.067 -250 56798 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGSGSSGTGEQKEDQKEEK [R].eGSGSSGTGEQkEDQkEEk.[Q] N-Term(TMT6plex); K12(TMT6plex); K16(TMT6plex); K19(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 2 4 4 0.6463 0 1 1 1 732.39185 2926.54555 2926.54114 1.51 0.0011 0/0 0 0 13838548 HCD 30 MS2 3.176801 549.3 110 50.592 13707 13707 13705 QEplus033719.raw F4 534 430.8 582.7 795.6 436 516.4 403 2.29 1 FALSE 1.14E-05 5.35E-11 2.049 -250 56804 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVSHRPGAFK [K].tAVSHRPGAFk.[A] N-Term(TMT6plex); K11(TMT6plex) 1 Q9CPT4 Myeloid-derived growth factor OS=Mus musculus OX=10090 GN=Mydgf PE=1 SV=1 Q9CPT4 Myeloid-derived growth factor OS=Mus musculus OX=10090 GN=Mydgf PE=1 SV=1 0 4 4 0.6132 0 1 1 1 407.99646 1628.96401 1628.96368 0.2 0.00008 0/0 0 0 80108136 HCD 30 MS2 57.66935 544.3 10.219 50.5943 13708 13708 13705 QEplus033719.raw F4 509.5 449.1 627.9 443.2 601.7 634.1 366 3.18 1 FALSE 3.35E-05 0.001211 0.645 -250 56822 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGIHEDSQNRK [K].lGIHEDSQNRk.[K] N-Term(TMT6plex); K11(TMT6plex) 8 P07901 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4 Q3TKB9; P07901; Q3TJU7; Q3TKA2; Q3UIF3; A0PJ91; Q3TKG0; Q8C5U3 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 1 4 4 0.5534 0 1 1 1 439.50357 1754.99245 1754.99135 0.63 0.00028 0/0 0 0 31872252 HCD 30 MS2 50.33807 583.5 25.281 50.5988 13710 13710 13705 QEplus033719.raw F4 799.9 487.3 611.6 382.9 643.4 576.1 423 2.62 1 FALSE 3.35E-05 0.001143 0.65 -250 56832 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDASTPPSPK [K].sDASTPPSPk.[V] N-Term(TMT6plex); K10(TMT6plex) 2 Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 Q3TXE5; Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 0 3 3 0.6188 0 1 1 1 482.27325 1444.80521 1444.80478 0.3 0.00014 0/0 0 0 30834962 HCD 30 MS2 29.03588 785.1 51.127 50.601 13711 13711 13705 QEplus033719.raw F4 1046.2 617.6 855.7 554.1 818.3 818.9 343 4.04 1 FALSE 1.14E-05 5.83E-05 0.902 -250 56837 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDASTPPSPK [K].sDASTPPSPk.[V] N-Term(TMT6plex); K10(TMT6plex) 2 Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 Q3TXE5; Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 0 2 2 0.6217 0 1 1 1 722.90686 1444.80644 1444.80478 1.15 0.00083 0/0 0 0 26194702 HCD 30 MS2 5.220022 756.7 110 50.6036 13712 13712 13705 QEplus033719.raw F4 738.6 608.4 821.4 602.5 873 896 376 3.78 1 FALSE 1.14E-05 2.82E-08 1.532 -250 56850 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDQCYDDIR [K].nDQcYDDIR.[V] N-Term(TMT6plex); C4(Carbamidomethyl) 7 Q3TF74 Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1 Q3TF74; E9PZJ0; Q5PPQ7; Q3TEU8; E9PVJ1; Q9WUM4; E9PX03 Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin-1C (Fragment) OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=1; Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin-1C (Fragment) OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=1; Coronin-1C OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=2; Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=1 0 2 2 0.8991 0 1 1 1 714.32532 1427.64336 1427.64226 0.77 0.00055 0/0 0 0 14060320 HCD 30 MS2 36.23856 700.2 110 50.6083 13714 13714 13705 QEplus033719.raw F4 675.2 725.4 641.1 408 1217.6 534 21 3.17 1 FALSE 1.14E-05 0.0001207 0.841 -250 56869 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THMQNIK [R].tHMQNIk.[D] N-Term(TMT6plex); K7(TMT6plex) 5 Q80UG5 Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 Q80UG5-3; Q80UG5; A2A6U3; Q80UG5-2; Q3TDR9 Isoform 3 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Isoform 2 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-type G domain-containing protein OS=Mus musculus OX=10090 GN=Septin9 PE=2 SV=1 0 2 2 0.1726 0 1 1 1 665.38995 1329.77263 1329.77131 0.99 0.00066 0/0 0 0 8250934 HCD 30 MS2 0 538.8 110 50.6204 13718 13718 13716 QEplus033719.raw F4 554.3 453.8 578 464.3 645.9 536.7 349 3.07 1 FALSE 0.0001707 0.003894 0.53 -250 56884 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQNGAQGIR [K].iQNGAQGIR.[F] N-Term(TMT6plex) 2 Q8C2Q7 Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus OX=10090 GN=Hnrnph1 PE=1 SV=1 Q8C2Q7; O35737 Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus OX=10090 GN=Hnrnph1 PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus OX=10090 GN=Hnrnph1 PE=1 SV=3 0 2 2 0.4541 0 1 1 1 593.34955 1185.69182 1185.69014 1.42 0.00084 0/0 0 0 57468080 HCD 30 MS2 60.10396 624.7 14.62 50.6249 13720 13720 13716 QEplus033719.raw F4 547.3 667.1 752.1 369.3 777.7 634.8 257 2.29 1 FALSE 3.35E-05 0.001342 0.636 -250 56892 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQTESGEYSR [R].lQTESGEYSR.[Q] N-Term(TMT6plex) 2 Q5SX40 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1 Q5SX40; B2RWX0 "Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1" 0 2 2 0.769 0 1 1 1 699.85632 1398.70537 1398.70624 -0.62 -0.00043 0/0 0 0 53587400 HCD 30 MS2 28.53527 683.7 28.464 50.6272 13721 13721 13716 QEplus033719.raw F4 694.4 362.5 552.2 1143.9 469.9 879.4 153 3.16 1 FALSE 1.14E-05 3.18E-06 1.142 -250 56899 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELNMGQR [K].eLNMGQR.[C] N-Term(TMT6plex) 2 P45952 "Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadm PE=1 SV=1" P45952; Q91WS8 "Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadm PE=1 SV=1; Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadm PE=2 SV=1" 0 2 2 0.4125 0 1 1 1 538.79034 1076.57341 1076.57199 1.32 0.00071 0/0 0 0 40798536 HCD 30 MS2 31.06044 907.3 24.167 50.6295 13722 13722 13716 QEplus033719.raw F4 1084.1 672.2 937.5 971.2 800 978.5 269 2.57 1 FALSE 0.00102 0.0133 0.355 -250 56905 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQPSLRPK [R].sQPSLRPk.[D] N-Term(TMT6plex); K8(TMT6plex) 5 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q91VL4; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Col1a2 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 3 3 0.4308 0 1 1 1 457.62256 1370.85312 1370.852 0.82 0.00037 0/0 0 0 12342289 HCD 30 MS2 10.63214 1053.8 110 50.6342 13724 13724 13716 QEplus033719.raw F4 1138.5 877.8 1111.3 925.1 1209.4 1060.6 246 2.53 1 FALSE 0.001142 0.01527 0.329 -250 56911 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAIGEGMTR [K].sAIGEGMTR.[K] N-Term(TMT6plex) 5 P62814 "V-type proton ATPase subunit B, brain isoform OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=1 SV=1" P62814; A0A1S6GWG6; Q91YH6; B0LAC8; Q99KA3 "V-type proton ATPase subunit B, brain isoform OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=1 SV=1; Vacuolar proton pump subunit B OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=2 SV=1; V-type proton ATPase subunit B, kidney isoform OS=Mus musculus OX=10090 GN=Atp6v1b1 PE=1 SV=1; ATPase H+ transporting lysosomal V1 subunit B2 (Fragment) OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=2 SV=1; Vacuolar proton pump subunit B (Fragment) OS=Mus musculus OX=10090 GN=Atp6v1b1 PE=2 SV=1" 0 2 2 0.6045 0 1 1 1 575.80896 1150.61064 1150.60877 1.62 0.00093 0/0 0 0 12256314 HCD 30 MS2 44.2625 1234.6 110 50.6367 13725 13725 13716 QEplus033719.raw F4 1703.8 901 1399.3 1075.5 995 1332.9 224 3.11 1 FALSE 1.14E-05 6.64E-05 0.891 -250 56921 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVEEPQSNR [K].iVEEPQSNR.[S] N-Term(TMT6plex) 2 Q6ZPX7 Non-specific serine/threonine protein kinase (Fragment) OS=Mus musculus OX=10090 GN=mKIAA1101 PE=3 SV=1 Q6ZPX7; Q6P9R2 Non-specific serine/threonine protein kinase (Fragment) OS=Mus musculus OX=10090 GN=mKIAA1101 PE=3 SV=1; Serine/threonine-protein kinase OSR1 OS=Mus musculus OX=10090 GN=Oxsr1 PE=1 SV=1 0 2 2 0.6769 0 1 1 1 650.85754 1300.70781 1300.70585 1.51 0.00098 0/0 0 0 10086429 HCD 30 MS2 0 612.6 110 50.6393 13726 13726 13716 QEplus033719.raw F4 602.1 528.4 676.3 519.6 673 676.5 249 2.94 1 FALSE 1.14E-05 0.000957 0.666 -250 56927 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STVDPPAPSAGR [R].sTVDPPAPSAGR.[G] N-Term(TMT6plex) 7 Q8C5Q5 T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1 Q3TET0; Q3UIJ0; Q8C5Q5; A0A0N4SV00; Q3TJN2; Q3THH8; P80313 T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=1 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=1 SV=1 0 2 2 0.5647 0 1 1 1 692.37567 1383.74407 1383.74296 0.8 0.00055 0/0 0 0 11741143 HCD 30 MS2 5.122501 410.3 110 50.6466 13728 13728 13727 QEplus033719.raw F4 428.5 280.6 446.2 385.1 421.8 499.3 256 3.17 1 FALSE 1.14E-05 3.27E-08 1.519 -250 56936 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDCTANTNTCNK [K].vDcTANTNTcNk.[Y] N-Term(TMT6plex); C3(Carbamidomethyl); C10(Carbamidomethyl); K12(TMT6plex) 2 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 P27773; F6Q404 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2; Protein disulfide-isomerase A3 (Fragment) OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=1 0 3 3 0.668 0 1 1 1 619.3067 1855.90555 1855.90425 0.7 0.00043 0/0 0 0 25354252 HCD 30 MS2 4.862555 644 102.111 50.649 13729 13729 13727 QEplus033719.raw F4 717 589.5 670.3 493.8 735.2 658.5 146 5.06 1 FALSE 1.14E-05 4.89E-07 1.296 -250 56951 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVLAAR [R].dVLAAR.[A] N-Term(TMT6plex) 2 Q99P72 Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4 PE=1 SV=2 Q99P72-3; Q99P72 Isoform D of Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4; Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4 PE=1 SV=2 0 2 2 0.1535 0 1 1 1 437.27216 873.53703 873.53553 1.72 0.00075 0/0 0 0 92566400 HCD 30 MS2 20.07403 642.1 13.905 50.6535 13731 13731 13727 QEplus033719.raw F4 733.6 206.4 631.3 909.8 380.1 991.2 114 2.15 1 FALSE 0.003464 0.06679 0.096 -250 56959 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVTPASSAK [K].tVTPASSAk.[T] N-Term(TMT6plex); K9(TMT6plex) 1 O08553 Dihydropyrimidinase-related protein 2 OS=Mus musculus OX=10090 GN=Dpysl2 PE=1 SV=2 O08553 Dihydropyrimidinase-related protein 2 OS=Mus musculus OX=10090 GN=Dpysl2 PE=1 SV=2 0 2 2 0.3931 0 1 1 1 660.40131 1319.79534 1319.79349 1.4 0.00092 0/0 0 0 34842956 HCD 30 MS2 11.31432 944.5 70.501 50.658 13733 13733 13727 QEplus033719.raw F4 997.4 900.8 926.3 538.4 1695.9 608.3 445 2.9 1 FALSE 1.14E-05 0.0007643 0.686 -250 56968 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGGSSVDLHR [R-].vGGSSVDLHR.[F] N-Term(TMT6plex) 20 P30999 Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2 P30999-2; E9Q906; Q3TPD1; E9Q905; D3Z2H2; P30999; E9Q8Z9; Q3UF77; G3X9V2; E9Q903; E9Q986; E9Q8Z8; E9Q901; E9Q8Z6; P30999-3; E9Q904; E9Q8Z5; E9Q8Z4; D3Z7H6; E9Q907 Isoform 2 of Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Isoform 3 of Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1 0 3 3 0.438 0 1 1 1 419.23724 1255.69718 1255.69561 1.24 0.00052 0/0 0 0 17677302 HCD 30 MS2 13.76349 411.1 110 50.6605 13734 13734 13727 QEplus033719.raw F4 501.3 325.2 375.2 368.5 554 342.3 262 4.84 1 FALSE 1.14E-05 2.74E-10 1.914 -250 56974 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGIHEDSQNRK [K].lGIHEDSQNRk.[K] N-Term(TMT6plex); K11(TMT6plex) 8 P07901 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4 Q3TKB9; P07901; Q3TJU7; Q3TKA2; Q3UIF3; A0PJ91; Q3TKG0; Q8C5U3 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 1 3 3 0.6475 0 1 1 1 585.66949 1754.99393 1754.99135 1.47 0.00086 0/0 0 0 15400895 HCD 30 MS2 8.502577 1012.7 110 50.663 13735 13735 13727 QEplus033719.raw F4 1089.1 1019.3 1032.4 840.8 1365.9 728.5 414 4 1 FALSE 1.14E-05 4.41E-08 1.495 -250 57006 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LPREPSNPDR [R].lPREPSNPDR.[L] N-Term(TMT6plex) 7 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 3 3 0.5057 0 1 1 1 470.59546 1409.77182 1409.76984 1.41 0.00066 0/0 0 0 21024668 HCD 30 MS2 3.379198 440.6 60.994 50.6798 13741 13741 13738 QEplus033719.raw F4 489.6 376.3 480.7 321.7 537.8 437.2 369 3.5 1 FALSE 0.0005944 0.008779 0.425 -250 57024 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIEAQEKPR [R].qIEAQEkPR.[D] N-Term(TMT6plex); K7(TMT6plex) 5 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q8BQ35; Q3TTX2; Q62261; A0A0A0MQG2; Q62261-2 "PH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 3 3 0.4604 0 1 1 1 519.6449 1556.92014 1556.91606 2.62 0.00136 0/0 0 0 17886652 HCD 30 MS2 54.34916 1272.1 106.542 50.6871 13744 13744 13738 QEplus033719.raw F4 1314.2 1052.2 1484.4 1140.1 1189.9 1451.7 325 4.04 2 FALSE 2.26E-05 0.0009996 0.662 -250 57039 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVSHRPGAFK [K].tAVSHRPGAFk.[A] N-Term(TMT6plex); K11(TMT6plex) 1 Q9CPT4 Myeloid-derived growth factor OS=Mus musculus OX=10090 GN=Mydgf PE=1 SV=1 Q9CPT4 Myeloid-derived growth factor OS=Mus musculus OX=10090 GN=Mydgf PE=1 SV=1 0 3 3 0.4402 0 1 1 1 543.65997 1628.96537 1628.96368 1.03 0.00056 0/0 0 0 15017981 HCD 30 MS2 28.39885 1020.5 110 50.6921 13746 13746 13738 QEplus033719.raw F4 1036.4 908.6 1129.5 808.4 1133.3 1106.7 335 2.59 1 FALSE 0.001231 0.01666 0.313 -250 57048 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNLGAEAPHQNGECHPNEK [K].nNLGAEAPHQNGEcHPNEk.[G] N-Term(TMT6plex); C14(Carbamidomethyl); K19(TMT6plex) 4 Q61699 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2 E9Q0U7; Q61699; Q8C6H1; Q61699-2 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=1; Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsph1 PE=2 SV=1; Isoform HSP105-beta of Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 0 4 4 0.7776 0 1 1 1 644.31879 2574.25332 2574.25195 0.53 0.00034 0/0 0 0 6071083 HCD 30 MS2 11.58087 313.4 110 50.6946 13747 13747 13738 QEplus033719.raw F4 316.9 232.1 350.4 259.6 315.3 406.2 169 7.69 1 FALSE 1.14E-05 6.31E-16 4.078 -250 57056 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESKDPADETEAD [K].eSkDPADETEAD.[-] N-Term(TMT6plex); K3(TMT6plex) 6 Q91XT3 Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1 Q9CXQ8; Q91XT3; Q9DCP3; Q9CYU5; Q8C2H3; P54227 Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=2 1 2 2 0.6463 0 1 1 1 882.93195 1764.85661 1764.85397 1.5 0.00132 0/0 0 0 13484446 HCD 30 MS2 0 521 110 50.6971 13748 13748 13738 QEplus033719.raw F4 530.3 641.3 451.4 198.9 1010.4 294 123 1.64 1 FALSE 1.14E-05 0.000158 0.819 -250 57059 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDCTANTNTCNK [K].vDcTANTNTcNk.[Y] N-Term(TMT6plex); C3(Carbamidomethyl); C10(Carbamidomethyl); K12(TMT6plex) 2 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 P27773; F6Q404 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2; Protein disulfide-isomerase A3 (Fragment) OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=1 0 2 2 0.8216 0 1 1 1 928.45673 1855.90618 1855.90425 1.04 0.00096 0/0 0 0 22961582 HCD 30 MS2 4.350189 707.8 110 50.7044 13750 13750 13749 QEplus033719.raw F4 773.7 722.3 742.2 483.2 880 645.6 150 4.99 1 FALSE 1.14E-05 5.42E-11 2.047 -250 57073 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTAVAICR [K].gTAVAIcR.[R] N-Term(TMT6plex); C7(Carbamidomethyl) 11 O55143-2; O55143 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2 E9Q559; B1ATS5; Q64518-3; Q64518; O55143-2; Q8C213; Q64518-1; B1ATS4; O55143; Q5DTI2; Q3U1K2 Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=1; Isoform SERCA3C of Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus OX=10090 GN=Atp2a3; Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=4; Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a3 PE=2 SV=1; Isoform SERCA3B of Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus OX=10090 GN=Atp2a3; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a3 PE=2 SV=1 0 2 2 0.4895 0 1 1 1 538.80853 1076.60979 1076.60838 1.31 0.0007 0/0 0 0 89844088 HCD 30 MS2 39.62387 696.4 10.326 50.7092 13752 13752 13749 QEplus033719.raw F4 772.2 442.6 673 948 525 817.4 258 2.39 2 FALSE 0.0001504 0.003452 0.543 -250 57091 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGLTHEELK [K].hGLTHEELk.[S] N-Term(TMT6plex); K9(TMT6plex) 5 Q569Z6 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1 Q569Z6; Q91VL2; Q8BZN7; F7AB07; Q3U503 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Thrap3 protein (Fragment) OS=Mus musculus OX=10090 GN=Thrap3 PE=2 SV=1; Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Thyroid hormone receptor-associated protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Btz domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Thrap3 PE=2 SV=1 0 4 4 0.5344 0 1 1 1 381.22525 1521.87917 1521.87895 0.15 0.00006 0/0 0 0 27973558 HCD 30 MS2 11.84147 449.6 45.608 50.7137 13754 13754 13749 QEplus033719.raw F4 467.2 452 541.8 325.7 486.3 424.5 490 4.51 1 FALSE 1.14E-05 2.01E-06 1.18 -250 57104 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLAVDAR [R].nLAVDAR.[N] N-Term(TMT6plex) 20 P30999 Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2 D3Z2H7; P30999-2; E9Q906; Q3TPD1; E9Q905; D3Z2H2; P30999; E9Q8Z9; G3X9V2; E9Q903; E9Q986; E9Q8Z8; E9Q901; E9Q8Z6; P30999-3; E9Q904; E9Q8Z5; E9Q8Z4; D3Z7H6; E9Q907 Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Isoform 2 of Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Isoform 3 of Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1 0 2 2 0.4024 0 1 1 1 494.29379 987.58031 987.57846 1.87 0.00092 0/0 0 0 20529390 HCD 30 MS2 44.81612 1004.7 71.522 50.7182 13756 13756 13749 QEplus033719.raw F4 1093.8 874.3 1104.6 795.7 1208.5 951.4 377 2.46 1 FALSE 9.73E-05 0.002957 0.56 -250 57113 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CSQGCICK [K].cSQGcIck.[E] N-Term(TMT6plex); C1(Carbamidomethyl); C5(Carbamidomethyl); C7(Carbamidomethyl); K8(TMT6plex) 1 P02798 Metallothionein-2 OS=Mus musculus OX=10090 GN=Mt2 PE=1 SV=2 P02798 Metallothionein-2 OS=Mus musculus OX=10090 GN=Mt2 PE=1 SV=2 0 2 2 0.7865 0 1 1 1 735.86798 1470.72869 1470.72675 1.32 0.00097 0/0 0 0 19935888 HCD 30 MS2 5.153968 963.5 110 50.7207 13757 13757 13749 QEplus033719.raw F4 814.8 1138.9 1297.5 694 722.5 1113 109 3.84 1 FALSE 1.14E-05 0.000379 0.746 -250 57121 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVSEMEMASR [R].rVSEMEMASR.[E] N-Term(TMT6plex) 2 P37889 Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 P37889-2; P37889 Isoform 2 of Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2; Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 1 3 3 0.7246 0 1 1 1 475.57819 1424.72 1424.71873 0.89 0.00042 0/0 0 0 18291092 HCD 30 MS2 21.59708 677 82.062 50.723 13758 13758 13749 QEplus033719.raw F4 764.3 537.7 681.1 670 661.2 747.9 165 5.01 1 FALSE 1.14E-05 2.67E-07 1.346 -250 57125 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLDRGEFR [K].sLDRGEFR.[L] N-Term(TMT6plex) 4 Q9WTI7-3 Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c Q9WTI7; Q9WTI7-3; Q9WTI7-2; Q9WTI7-4 Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c PE=1 SV=2; Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Isoform 2 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Isoform 4 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c 1 3 3 0.396 0 1 1 1 403.55804 1208.65958 1208.6585 0.89 0.00036 0/0 0 0 17367724 HCD 30 MS2 25.26944 678.7 57.759 50.7253 13759 13759 13749 QEplus033719.raw F4 668.6 538.7 776.1 587.9 744.7 756.2 314 2.98 1 FALSE 0.001514 0.02278 0.259 -250 57135 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAAWHK [R].nAAWHk.[H] N-Term(TMT6plex); K6(TMT6plex) 3 Q3TD78 NIPSNAP domain-containing protein OS=Mus musculus OX=10090 GN=Nipsnap2 PE=2 SV=1 Q3TD78; Q7TMG8; O55126 NIPSNAP domain-containing protein OS=Mus musculus OX=10090 GN=Nipsnap2 PE=2 SV=1; Glioblastoma amplified sequence OS=Mus musculus OX=10090 GN=Nipsnap2 PE=1 SV=1; Protein NipSnap homolog 2 OS=Mus musculus OX=10090 GN=Nipsnap2 PE=1 SV=1 0 3 3 0.3688 0 1 1 1 395.57071 1184.69757 1184.69405 2.98 0.00118 0/0 0 0 16920896 HCD 30 MS2 52.62474 572.6 43.476 50.7325 13761 13761 13760 QEplus033719.raw F4 666.2 300.2 624.8 622.5 516.5 705.2 235 2.82 1 FALSE 0.005324 0.09087 0.032 -250 57143 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIYDTK [R].hIYDTk.[L] N-Term(TMT6plex); K6(TMT6plex) 3 Q543F3 Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1 Q922F8; Q543F3; D3Z7R6 Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1 0 3 3 0.2857 0 1 1 1 412.24551 1234.72199 1234.71959 1.94 0.0008 0/0 0 0 21509456 HCD 30 MS2 11.26638 658.1 66.641 50.7348 13762 13762 13760 QEplus033719.raw F4 731.5 592.9 681 424.6 863.3 655.3 458 2.38 1 FALSE 0.0008899 0.01232 0.369 -250 57166 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESKDPADETEAD [K].eSkDPADETEAD.[-] N-Term(TMT6plex); K3(TMT6plex) 6 Q91XT3 Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1 Q9CXQ8; Q91XT3; Q9DCP3; Q9CYU5; Q8C2H3; P54227 Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=2 1 3 3 0.5679 0 1 1 1 588.95709 1764.85672 1764.85397 1.56 0.00092 0/0 0 0 23148658 HCD 30 MS2 30.89002 884.6 110 50.744 13766 13766 13760 QEplus033719.raw F4 1067.3 844.1 897.6 570.2 1203.2 725.1 124 3.24 1 FALSE 1.14E-05 0.0002184 0.792 -250 57172 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQEQQADLQR [K].mQEQQADLQR.[R] N-Term(TMT6plex) 9 E9Q586 Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1 E9Q3M3; E9Q586; O08788-2; D3YX34; Q3T9V8; O08788; Q6NZM3; Q3TB96; Q3TRF1 Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Isoform 2 of Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=3; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1; CAP-Gly domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1 0 2 2 0.724 0 1 1 1 738.37994 1475.75261 1475.74739 3.54 0.00261 0/0 0 0 11050414 HCD 30 MS2 24.90652 402 110 50.7466 13767 13767 13760 QEplus033719.raw F4 379.3 354.7 461.5 332.5 449.2 434.8 193 3.08 1 FALSE 1.14E-05 3.79E-06 1.127 -250 57177 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAVGSGSWQR [K].sAVGSGSWQR.[V] N-Term(TMT6plex) 3 Q3UQS9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1 O55124; Q3UQS9; Q14BI5 M-protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1; Myomesin 2 OS=Mus musculus OX=10090 GN=Myom2 PE=1 SV=1 0 2 2 0.586 0 1 1 1 632.33698 1263.66667 1263.66431 1.87 0.00118 0/0 0 0 7108173.5 HCD 30 MS2 23.79743 787.3 110 50.7491 13768 13768 13760 QEplus033719.raw F4 869 385.1 682.5 1221 522.5 1043.5 265 3.14 1 FALSE 1.14E-05 4.66E-06 1.11 -250 57207 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTEDEVEK [K].gTEDEVEk.[Y] N-Term(TMT6plex); K8(TMT6plex) 8 P58774; A2AIM4; P58774-2 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 Q9D1R6; Q91VH3; P58774; A2AIM4; Q3SX28; P58774-2; A2AIM5; Q61344 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=8; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1 0 2 2 0.2046 0 1 1 1 682.86676 1364.72624 1364.73095 -3.45 -0.00235 0/0 0 0 4165528 HCD 30 MS2 28.52995 420.1 110 50.7639 13773 13773 13771 QEplus033719.raw F4 452.2 290.4 448.2 435.4 404.8 489.7 288 2.59 3 TRUE 1.14E-05 0.0009375 0.668 -250 57214 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YKAEDEK [K].ykAEDEk.[Q] N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex) 15 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 1 3 3 0.1643 0 1 1 1 523.97516 1569.91092 1569.90913 1.14 0.0006 0/0 0 0 73128728 HCD 30 MS2 28.02655 1676.7 24.917 50.7662 13774 13774 13771 QEplus033719.raw F4 2928.8 1146.7 1870.6 1480.6 1183.9 1449.8 361 2.13 1 FALSE 0.002578 0.0506 0.14 -250 57231 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAVEQIR [K].kAVEQIR.[N] N-Term(TMT6plex); K1(TMT6plex) 9 Q3TZI3 Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=2 SV=1 Q3TZI3; Q3UK67; E9Q4Q2; D3YZC9; D3YVH4; Q64213; Q64213-2; D3YZD0; Q3UI45 Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=2 SV=1; Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=2 SV=1; Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=1 SV=1; Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=1 SV=1; Splicing factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Sf1 PE=1 SV=1; Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=1 SV=6; Isoform CW17E of Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1; Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=1 SV=1; Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=2 SV=1 1 3 3 0.2019 0 1 1 1 434.61508 1301.83069 1301.83054 0.12 0.00005 0/0 0 0 20841622 HCD 30 MS2 57.4137 679.8 41.458 50.7707 13776 13776 13771 QEplus033719.raw F4 654 641.3 759 531.5 836.1 657.2 392 2.08 1 FALSE 0.003058 0.05975 0.115 -250 57249 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDLDGSTK [R].gDLDGSTk.[D] N-Term(TMT6plex); K8(TMT6plex) 3 P37889 Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 P37889-2; Q99K58; P37889 Isoform 2 of Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2; Fibulin 2 OS=Mus musculus OX=10090 GN=Fbln2 PE=2 SV=1; Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 0 2 2 0.3397 0 1 1 1 625.85211 1250.69695 1250.69925 -1.84 -0.00115 0/0 0 0 20328102 HCD 30 MS2 51.93452 1283.3 78.02 50.7752 13778 13778 13771 QEplus033719.raw F4 1485.2 1079 1392 1148.5 1404.9 1190.3 320 1.56 1 FALSE 0.0005556 0.008276 0.434 -250 57265 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGPEGFAR [R].eGPEGFAR.[A] N-Term(TMT6plex) 8 G5E8R3 Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=1 SV=1 G5E8R3; Q3UFS6; Q05920; Q3TCQ3; Q8BP54; Q3T9S7; E9QPD7; Q62043 "Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=1 SV=1; Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1; Pyruvate carboxylase, mitochondrial OS=Mus musculus OX=10090 GN=Pc PE=1 SV=1; Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1; Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1; Pyruvate carboxylase OS=Mus musculus OX=10090 GN=Pcx PE=1 SV=1; Pyruvate carboxylase (Fragment) OS=Mus musculus OX=10090 GN=Pcx PE=2 SV=1" 0 2 2 0.2426 0 1 1 1 546.28882 1091.57036 1091.56829 1.9 0.00104 0/0 0 0 14163163 HCD 30 MS2 52.93671 1579.2 99.137 50.78 13780 13780 13771 QEplus033719.raw F4 2303.5 842.4 1621.8 1813.7 846.3 2047.7 176 2.35 1 FALSE 0.003101 0.06047 0.113 -250 57282 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EASSGSTPQKPK [K].eASSGSTPQkPk.[K] N-Term(TMT6plex); K10(TMT6plex); K12(TMT6plex) 6 O08784 Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 Q3TBZ3; Q05BH6; O08784; Q7TPZ2; Q3TAB2; H3BL37 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 0 3 3 0.6545 0 1 1 1 635.37494 1904.11026 1904.1056 2.45 0.00155 0/0 0 0 9623107 HCD 30 MS2 30.86839 686.1 110 50.7898 13783 13783 13782 QEplus033719.raw F4 692.7 665.6 746.6 630.3 776.8 604.9 431 3.3 1 FALSE 1.14E-05 3.76E-08 1.508 -250 57289 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YKAEDEK [K].ykAEDEk.[Q] N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex) 15 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 1 2 2 0.2101 0 1 1 1 785.45898 1569.91069 1569.90913 0.99 0.00078 0/0 0 0 6224534 HCD 30 MS2 11.18821 418.7 110 50.7924 13784 13784 13782 QEplus033719.raw F4 703.9 266.6 458.1 456.8 242 384.8 359 2.38 1 FALSE 0.0009259 0.0128 0.362 -250 57298 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVDNALR [R].dVDNALR.[A] N-Term(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.4015 0 1 1 1 516.28833 1031.56938 1031.56829 1.06 0.00055 0/0 0 0 47183528 HCD 30 MS2 26.62548 828.8 28.456 50.7946 13785 13785 13782 QEplus033719.raw F4 1040.8 711.7 887.4 577.7 943.2 812.2 265 2.64 1 FALSE 0.0002814 0.005731 0.484 -250 57306 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HYELYR [R].hYELYR.[R] N-Term(TMT6plex) 19 B7ZC46; Q8C650; Q8C1B7 Septin OS=Mus musculus OX=10090 GN=Septin8 PE=1 SV=1;Septin-10 OS=Mus musculus OX=10090 GN=Septin10 PE=1 SV=1;Septin-11 OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=4 Q8CHH9-2; B7ZC46; Q8C650; Q9R1T4-3; Q9R1T4; A0A1W2P6J7; Q8CHH9; Q8C1B7; Q3UUU4; Q8C1B7-3; B1AQZ0; B1AQY9; Q8C650-2; A0A0R4J233; A0A1W2P866; A0A0J9YUL3; Q9R1T4-2; A0A0J9YTY0; Q8C1B7-2 Isoform 2 of Septin-8 OS=Mus musculus OX=10090 GN=Septin8; Septin OS=Mus musculus OX=10090 GN=Septin8 PE=1 SV=1; Septin-10 OS=Mus musculus OX=10090 GN=Septin10 PE=1 SV=1; Isoform V of Septin-6 OS=Mus musculus OX=10090 GN=Septin6; Septin-6 OS=Mus musculus OX=10090 GN=Septin6 PE=1 SV=4; Septin OS=Mus musculus OX=10090 GN=Septin10 PE=1 SV=1; Septin-8 OS=Mus musculus OX=10090 GN=Septin8 PE=1 SV=4; Septin-11 OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=4; Septin OS=Mus musculus OX=10090 GN=Septin6 PE=2 SV=1; Isoform 3 of Septin-11 OS=Mus musculus OX=10090 GN=Septin11; Septin-8 OS=Mus musculus OX=10090 GN=Septin8 PE=1 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin8 PE=1 SV=1; Isoform 2 of Septin-10 OS=Mus musculus OX=10090 GN=Septin10; Septin OS=Mus musculus OX=10090 GN=Septin10 PE=1 SV=1; Septin-10 (Fragment) OS=Mus musculus OX=10090 GN=Septin10 PE=1 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=1; Isoform I of Septin-6 OS=Mus musculus OX=10090 GN=Septin6; Septin OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=1; Isoform 2 of Septin-11 OS=Mus musculus OX=10090 GN=Septin11 0 3 3 0.719 0 1 1 1 370.53656 1109.59513 1109.59411 0.92 0.00034 0/0 0 0 29880416 HCD 30 MS2 45.3097 333.5 26.047 50.7969 13786 13786 13782 QEplus033719.raw F4 302.9 286.3 380.2 268.7 386.9 376.2 159 2.74 3 FALSE 0.001938 0.03325 0.201 -250 57315 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEGMPQYR [R].gEGMPQYR.[N] N-Term(TMT6plex) 2 Q3TFF0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja2 PE=2 SV=1 Q3TFF0; Q9QYJ0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja2 PE=2 SV=1; DnaJ homolog subfamily A member 2 OS=Mus musculus OX=10090 GN=Dnaja2 PE=1 SV=1 0 2 2 0.5742 0 1 1 1 583.79553 1166.58379 1166.58256 1.05 0.00061 0/0 0 0 21731396 HCD 30 MS2 8.576589 1093.2 110 50.7994 13787 13787 13782 QEplus033719.raw F4 1165.5 871.7 1179.4 1026.2 1110 1206.2 122 2.56 1 FALSE 0.0009075 0.01258 0.365 -250 57320 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAEISHR [K].lAEISHR.[L] N-Term(TMT6plex) 11 A2A9M4; A0A1L1SQR4 Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=2;Dedicator of cytokinesis protein 6 OS=Mus musculus OX=10090 GN=Dock6 PE=1 SV=1 Q6ZPS1; A2A9M4; A2A9M5; Q8R1A4-2; Q3U806; A0A0U1RNK7; A0A1L1SQR4; E9PX48; Q8R1A4; Q8VDR9; Q7TPP0 MKIAA1395 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA1395 PE=3 SV=2; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=2; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=1; Isoform 2 of Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7; DOCKER domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dock7 PE=2 SV=1; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=1; Dedicator of cytokinesis protein 6 OS=Mus musculus OX=10090 GN=Dock6 PE=1 SV=1; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=2; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=3; Dedicator of cytokinesis protein 6 OS=Mus musculus OX=10090 GN=Dock6 PE=1 SV=4; Dock7 protein (Fragment) OS=Mus musculus OX=10090 GN=Dock7 PE=2 SV=3 0 3 3 0.2687 0 1 1 1 352.21228 1054.62229 1054.62066 1.54 0.00054 0/0 0 0 15765901 HCD 30 MS2 56.88441 534.7 48.157 50.8016 13788 13788 13782 QEplus033719.raw F4 652.5 373 547.4 326.9 512.2 796.2 143 2.94 2 FALSE 5.44E-05 0.002029 0.597 -250 57332 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEGAAQLSEER [R].aEGAAQLSEER.[A] N-Term(TMT6plex) 3 P59017 Bcl-2-like protein 13 OS=Mus musculus OX=10090 GN=Bcl2l13 PE=1 SV=2 P59017; Q3TNR7; Q3UGC5 Bcl-2-like protein 13 OS=Mus musculus OX=10090 GN=Bcl2l13 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Bcl2l13 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Bcl2l13 PE=2 SV=1 0 2 2 0.422 0 1 1 1 695.36322 1389.71916 1389.71714 1.46 0.00101 0/0 0 0 10937605 HCD 30 MS2 0 398.1 110 50.8066 13790 13790 13782 QEplus033719.raw F4 387.2 269.3 396 488.9 326.6 520.6 230 4.36 1 FALSE 1.14E-05 2.79E-10 1.912 -250 57348 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SENLGQGDK [K].sENLGQGDk.[A] N-Term(TMT6plex); K9(TMT6plex) 3 Q5SWN2 Replication protein A subunit OS=Mus musculus OX=10090 GN=Rpa1 PE=1 SV=2 Q5SWN2; Q8VEE4; Q3U8B3 Replication protein A subunit OS=Mus musculus OX=10090 GN=Rpa1 PE=1 SV=2; Replication protein A 70 kDa DNA-binding subunit OS=Mus musculus OX=10090 GN=Rpa1 PE=1 SV=1; Replication protein A subunit OS=Mus musculus OX=10090 GN=Rpa1 PE=2 SV=1 0 2 2 0.4006 0 1 1 1 703.38788 1405.76848 1405.76873 -0.18 -0.00012 0/0 0 0 5118661 HCD 30 MS2 0 384.4 110 50.8117 13792 13792 13782 QEplus033719.raw F4 424 302.3 354.7 236.4 645.5 343.6 409 3.52 1 FALSE 1.14E-05 1.10E-06 1.23 -250 57360 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVVPSKR [R].aVVPSkR.[Q] N-Term(TMT6plex); K6(TMT6plex) 6 Q9Z204-2; Q9Z204-3 Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc;Isoform 3 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc Q3U6P5; Q9Z204; Q9Z204-5; Q9Z204-2; Q9Z204-4; Q9Z204-3 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Hnrnpc PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc PE=1 SV=1; Isoform 5 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform 4 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform 3 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc 1 3 3 0.352 0 1 1 1 405.60468 1214.79947 1214.79851 0.79 0.00032 0/0 0 0 21516012 HCD 30 MS2 41.30586 1030.8 68.609 50.8212 13795 13795 13793 QEplus033719.raw F4 1077.1 1102.9 1155 937.4 1021.9 890.5 207 2.5 2 FALSE 0.003651 0.06975 0.088 -250 57389 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NELNAK [R].nELNAk.[V] N-Term(TMT6plex); K6(TMT6plex) 3 A0A1S6GWH1 AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc5 PE=2 SV=1 A0A1S6GWH1; Q8K1K2; P62196 AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc5 PE=2 SV=1; 26S proteasome regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmc5 PE=1 SV=1; 26S proteasome regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmc5 PE=1 SV=1 0 2 2 0.0784 0 1 1 2 573.84827 1146.68926 1146.68829 0.84 0.00048 0/0 0 0 19781784 HCD 30 MS2 8.624345 1430.8 110 50.8305 13799 13799 13793 QEplus033719.raw F4 2213.4 852.3 1541.4 1505.1 989.8 1482.6 327 2.55 1 FALSE 0.002413 0.04768 0.149 -250 57399 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGFSER [R].vGFSER.[E] N-Term(TMT6plex) 2 Q9CX34 Protein SGT1 homolog OS=Mus musculus OX=10090 GN=Sugt1 PE=1 SV=3 Q9CRG3; Q9CX34 CS domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sugt1 PE=2 SV=1; Protein SGT1 homolog OS=Mus musculus OX=10090 GN=Sugt1 PE=1 SV=3 0 2 2 0.1972 0 1 1 1 462.26132 923.51537 923.5148 0.62 0.00029 0/0 0 0 16984640 HCD 30 MS2 54.22961 1046 68.161 50.8328 13800 13800 13793 QEplus033719.raw F4 1500.4 776.3 916.4 951.7 1212.2 919.3 94 2.13 1 FALSE 0.003851 0.07262 0.081 -250 57420 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MFGGSGTSSR [R].mFGGSGTSSR.[S] N-Term(TMT6plex) 1 Q3TWV0 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 Q3TWV0 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 0 2 2 0.7546 0 1 1 1 608.30255 1215.59783 1215.59894 -0.91 -0.00056 0/0 0 0 8486913 HCD 30 MS2 23.93447 1156.5 110 50.8403 13803 13803 13793 QEplus033719.raw F4 1161.1 1105.2 1272.3 1049.9 1231.1 1119.4 61 3.26 1 FALSE 1.14E-05 2.66E-05 0.967 -250 57446 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAANAPK [K].vAANAPk.[G] N-Term(TMT6plex); K7(TMT6plex) 5 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 Q80U89; Q68FD5; Q5SXR6; Q3U0H2; Q3TYQ2 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; Clathrin-link domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1; Clathrin-link domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1 0 2 2 0.4408 0 1 1 1 564.86121 1128.71514 1128.71411 0.9 0.00051 0/0 0 0 69281472 HCD 30 MS2 20.93499 825.7 19.728 50.8546 13808 13808 13804 QEplus033719.raw F4 956.3 652.6 955.3 753.9 877 759.1 157 2.45 1 FALSE 0.0008805 0.01218 0.371 -250 57456 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAGELTEDEVER [K].rAGELTEDEVER.[V] N-Term(TMT6plex) 5 Q561N5 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1 S4R1N6; Q561N5; Q3TW65; F6YVP7; A0A1Y7VKY1 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=3 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps6 PE=3 SV=2; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps5 PE=3 SV=1 1 3 3 0.6418 0 1 1 1 544.95117 1632.83896 1632.83904 -0.05 -0.00003 0/0 0 0 66028544 HCD 30 MS2 23.24844 575.8 27.716 50.8569 13809 13809 13804 QEplus033719.raw F4 771.9 441.7 637.5 488 512.1 603.7 217 5.36 1 FALSE 1.14E-05 1.03E-10 1.994 -250 57464 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQALAVSR [R].eQALAVSR.[N] N-Term(TMT6plex) 2 P62814 "V-type proton ATPase subunit B, brain isoform OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=1 SV=1" P62814; A0A1S6GWG6 "V-type proton ATPase subunit B, brain isoform OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=1 SV=1; Vacuolar proton pump subunit B OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=2 SV=1" 0 2 2 0.3321 0 1 1 1 551.82532 1102.64336 1102.64179 1.42 0.00078 0/0 0 0 45820300 HCD 30 MS2 27.31985 780.4 27.057 50.8614 13811 13811 13804 QEplus033719.raw F4 978.5 602.9 919.5 687.5 688.5 805.3 298 2.74 1 FALSE 1.14E-05 0.0001678 0.814 -250 57475 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPAAAAGAK [K].kPAAAAGAk.[K] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 3 P43274 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2 P43274; Q3U292; P43277 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2; H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f3 PE=2 SV=1; Histone H1.3 OS=Mus musculus OX=10090 GN=H1-3 PE=1 SV=2 0 3 3 0.3994 0 1 1 1 491.3241 1471.95774 1471.95636 0.94 0.00046 0/0 0 0 21414390 HCD 30 MS2 47.64768 1171.3 85.485 50.8682 13814 13814 13804 QEplus033719.raw F4 1875.2 657.8 1217.1 715.5 887.7 1674.8 185 3.53 1 FALSE 1.14E-05 1.81E-06 1.189 -250 57503 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQASAPAQAPK [K].aQASAPAQAPk.[G] N-Term(TMT6plex); K11(TMT6plex) 1 P47915 60S ribosomal protein L29 OS=Mus musculus OX=10090 GN=Rpl29 PE=1 SV=2 P47915 60S ribosomal protein L29 OS=Mus musculus OX=10090 GN=Rpl29 PE=1 SV=2 0 3 3 0.2312 0 1 1 1 499.96167 1497.87046 1497.87895 -5.67 -0.00283 0/0 0 0 129814000 HCD 30 MS2 6.631402 1104.7 14.363 50.88 13818 13818 13815 QEplus033719.raw F4 1468.2 223.2 710 2347.2 250.3 1629.5 342 1.73 1 FALSE 0.002413 0.0475 0.15 -250 57510 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGANSLER [R].mGANSLER.[M] N-Term(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; Q9D0E1-2; Q3TQ66; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 2 2 0.4468 0 1 1 1 553.79462 1106.58196 1106.58256 -0.54 -0.0003 0/0 0 0 68892152 HCD 30 MS2 52.9395 789.2 11.966 50.8822 13819 13819 13815 QEplus033719.raw F4 787 706.6 941.3 676 714.5 909.8 208 2.35 1 FALSE 4.43E-05 0.001442 0.629 -250 57534 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GASQAGMLAPGTRR [K].gASQAGMLAPGTRR.[D] N-Term(TMT6plex) 4 Q9DAW9 Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 Q9DAW9; A0A0G2JFI6; Q99JN5; A0A0G2JDV8 Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1; Calponin-3 (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=4; Cnn3 protein (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 1 3 3 0.6723 0 1 1 1 534.63019 1601.87601 1601.87432 1.05 0.00056 0/0 0 0 28295766 HCD 30 MS2 0 439.7 62.823 50.889 13822 13822 13815 QEplus033719.raw F4 494.9 375.9 479.2 244.5 671 372.5 349 5.37 1 FALSE 1.14E-05 3.22E-15 2.85 -250 57547 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGHLVHRK [R].lGHLVHRk.[T] N-Term(TMT6plex); K8(TMT6plex) 5 Q58ET1 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=1 SV=1 Q58ET1; V9GX35; Q5EBG5; Q6P1A9; Q80UT7 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=1 SV=1; 60S ribosomal protein L7a (Fragment) OS=Mus musculus OX=10090 GN=Gm14214 PE=3 SV=1; 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=2 SV=1; 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=2 SV=1; 60S ribosomal protein L7a (Fragment) OS=Mus musculus OX=10090 GN=Rpl7a PE=2 SV=1 1 4 4 0.5413 0 1 1 1 355.23471 1417.91701 1417.91561 0.99 0.00035 0/0 0 0 18134700 HCD 30 MS2 45.73539 564.3 48.807 50.8935 13824 13824 13815 QEplus033719.raw F4 522.5 501.3 786.9 357.5 414.8 802.8 145 3.27 1 FALSE 0.001125 0.01494 0.333 -250 57556 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQASAPAQAPK [K].aQASAPAQAPk.[G] N-Term(TMT6plex); K11(TMT6plex) 1 P47915 60S ribosomal protein L29 OS=Mus musculus OX=10090 GN=Rpl29 PE=1 SV=2 P47915 60S ribosomal protein L29 OS=Mus musculus OX=10090 GN=Rpl29 PE=1 SV=2 0 2 2 0.4486 0 1 1 1 749.43982 1497.87236 1497.87895 -4.4 -0.00329 0/0 0 0 12442856 HCD 30 MS2 0 512.1 110 50.9031 13827 13827 13826 QEplus033719.raw F4 619.2 196.4 390.9 911.3 271.4 683.5 336 3.21 1 FALSE 1.14E-05 4.45E-05 0.924 -250 57570 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSAPGGGNKVPQK [K].rSAPGGGNkVPQk.[K] N-Term(TMT6plex); K9(TMT6plex); K13(TMT6plex) 9 Q5SQB7 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1 Q5SQB7; Q5SQB0; Q8BSZ3; Q5BL09; Q5U438; Q9DAY9; Q3UDA7; Q5SQB5; Q3U536 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Npm1 protein OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1 2 4 4 0.4654 0 1 1 1 496.55777 1983.20925 1983.20665 1.31 0.00065 0/0 0 0 63857892 HCD 30 MS2 20.36417 636.9 11.767 50.9079 13829 13829 13826 QEplus033719.raw F4 667 686 705 412.6 773.5 577 223 4.34 1 FALSE 1.14E-05 2.40E-06 1.165 -250 57577 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HPQPFLR [K].hPQPFLR.[T] N-Term(TMT6plex) 2 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 B9EIU1; Q8CGC7 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4 0 3 3 0.4706 0 1 1 1 375.22394 1123.65726 1123.65738 -0.11 -0.00004 0/0 0 0 66470024 HCD 30 MS2 33.59973 357.5 13.992 50.9101 13830 13830 13826 QEplus033719.raw F4 379.4 250.9 388.2 314.6 388.1 423.7 190 2.89 1 FALSE 0.001456 0.02099 0.273 -250 57606 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAGELTEDEVER [K].rAGELTEDEVER.[V] N-Term(TMT6plex) 5 Q561N5 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1 S4R1N6; Q561N5; Q3TW65; F6YVP7; A0A1Y7VKY1 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=3 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps6 PE=3 SV=2; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps5 PE=3 SV=1 1 2 2 0.6211 0 1 1 1 816.92346 1632.83965 1632.83904 0.37 0.0003 0/0 0 0 17903596 HCD 30 MS2 0 188.2 110 50.9172 13833 13833 13826 QEplus033719.raw F4 194.7 148.4 214.7 158.3 187.6 225.5 219 4.17 1 FALSE 1.14E-05 4.01E-09 1.693 -250 57615 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDDMNQR [R].lDDMNQR.[W] N-Term(TMT6plex) 5 E9Q6R7 Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 O08614; Q9D1Z0; A0A1W2P7C0; Q61636; E9Q6R7 Cytoskeletal protein OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1; G-utrophin (Predicted protein) OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1; Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 0 2 2 0.6026 0 1 1 1 560.78516 1120.56304 1120.56182 1.08 0.00061 0/0 0 0 12904992 HCD 30 MS2 44.18097 887.5 110 50.9197 13834 13834 13826 QEplus033719.raw F4 927.7 851.5 1000.4 711.4 910.3 923.6 117 2.29 1 FALSE 0.002173 0.04157 0.169 -250 57621 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQPEVDMSDR [K].nQPEVDMSDR.[G] N-Term(TMT6plex) 7 Q01730 Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=3 Q01730; A2AUR7; Q3TFN7; Q9D031; E0CXG5; A0A0A6YWZ2; B1AYQ0 Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=3; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsu1 PE=2 SV=1; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1; Ras suppressor protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1 0 2 2 0.7052 0 1 1 1 710.34113 1419.67497 1419.67356 1 0.00071 0/0 0 0 7008098 HCD 30 MS2 13.06712 347.4 110 50.9222 13835 13835 13826 QEplus033719.raw F4 358.7 327.4 383.1 236.8 451.1 327.3 63 4.07 1 FALSE 1.14E-05 6.03E-08 1.469 -250 57662 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FQGTQPEPR [R].fQGTQPEPR.[D] N-Term(TMT6plex) 1 Q99J99 3-mercaptopyruvate sulfurtransferase OS=Mus musculus OX=10090 GN=Mpst PE=1 SV=4 Q99J99 3-mercaptopyruvate sulfurtransferase OS=Mus musculus OX=10090 GN=Mpst PE=1 SV=4 0 2 2 0.6449 0 1 1 1 644.84619 1288.68511 1288.68472 0.3 0.0002 0/0 0 0 23228710 HCD 30 MS2 16.51093 790.6 110 50.9435 13843 13843 13837 QEplus033719.raw F4 781 710.8 871.8 687.6 857.9 834.8 236 3.21 1 FALSE 1.14E-05 0.0002582 0.778 -250 57676 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSAPGGGNKVPQK [K].rSAPGGGNkVPQk.[K] N-Term(TMT6plex); K9(TMT6plex); K13(TMT6plex) 9 Q5SQB7 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1 Q5SQB7; Q5SQB0; Q8BSZ3; Q5BL09; Q5U438; Q9DAY9; Q3UDA7; Q5SQB5; Q3U536 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Npm1 protein OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1 2 3 3 0.5232 0 1 1 1 661.74115 1983.2089 1983.20665 1.13 0.00075 0/0 0 0 8893839 HCD 30 MS2 14.97442 599 110 50.9483 13845 13845 13837 QEplus033719.raw F4 580.8 672.5 656.8 410.7 733.6 539.6 224 2.37 1 FALSE 1.14E-05 0.0001352 0.832 -250 57681 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIESSPQYR [R].eIESSPQYR.[L] N-Term(TMT6plex) 7 Q7TQH0 Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1 Q7TQH0-3; Q7TQH0; Q7TQH0-2; E9Q5Q0; Q3TGG2; Q3TYH7; A0A0U1RPL0 Isoform 3 of Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l; Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1; Isoform 2 of Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l; Ataxin-2-like protein (Fragment) OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=2; Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1; LsmAD domain-containing protein OS=Mus musculus OX=10090 GN=Atxn2l PE=2 SV=1; Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1 0 2 2 0.4388 0 1 1 1 669.3493 1337.69133 1337.68986 1.1 0.00074 0/0 0 0 9409669 HCD 30 MS2 35.94966 651.6 110 50.9508 13846 13846 13837 QEplus033719.raw F4 671.9 561.9 696.4 559.4 801.2 618.6 214 2.94 1 FALSE 1.14E-05 1.81E-05 0.998 -250 57694 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGAQASSTPLSPTR [R].sGAQASSTPLSPTR.[I] N-Term(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 D3YUF7; P48678; P48678-2 Prelamin-A/C (Fragment) OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=1; Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 0 2 2 0.6976 0 1 1 1 794.92981 1588.85234 1588.84921 1.97 0.00156 0/0 0 0 6721356 HCD 30 MS2 18.2514 235.8 110 50.9607 13849 13849 13848 QEplus033719.raw F4 239.7 202.2 268.5 194.3 278.6 231.3 354 4.63 1 FALSE 1.14E-05 2.45E-13 2.493 -250 57701 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRQEICQSYK [K].qRQEIcQSYk.[S] N-Term(TMT6plex); C6(Carbamidomethyl); K10(TMT6plex) 1 Q99JX6 Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 Q99JX6 Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 1 2 2 0.7125 0 1 1 1 899.48871 1797.97014 1797.96817 1.09 0.00098 0/0 0 0 6081327.5 HCD 30 MS2 0 333.8 110 50.9632 13850 13850 13848 QEplus033719.raw F4 380.8 268.1 373.3 294.4 348.3 337.8 343 3.93 1 FALSE 1.14E-05 1.59E-06 1.199 -250 57708 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRQEICQSYK [K].qRQEIcQSYk.[S] N-Term(TMT6plex); C6(Carbamidomethyl); K10(TMT6plex) 1 Q99JX6 Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 Q99JX6 Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 1 3 3 0.7246 0 1 1 1 599.99487 1797.97007 1797.96817 1.05 0.00063 0/0 0 0 124469512 HCD 30 MS2 5.94981 900 16.992 50.9654 13851 13851 13848 QEplus033719.raw F4 1032.5 704.1 976.8 884.8 904.3 897.8 337 4.43 1 FALSE 1.14E-05 2.05E-10 1.938 -250 57724 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMSIGAR [R].aMSIGAR.[S] N-Term(TMT6plex) 3 Q3TS44 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 A0A1B0GS70; Q8BTU5; Q3TS44 Proteasome subunit alpha type-1 OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 0 2 2 0.3158 0 1 1 1 467.77155 934.53581 934.53415 1.78 0.00083 0/0 0 0 50475508 HCD 30 MS2 39.22038 799.8 18.352 50.9722 13854 13854 13848 QEplus033719.raw F4 1340.1 542.7 781.4 518.1 675.2 941 142 2.66 1 FALSE 0.0004793 0.007584 0.447 -250 57734 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGFHIR [K].dGFHIR.[V] N-Term(TMT6plex) 7 A2AM97 Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1 P86048; A0A1B0GXC3; I7HLV2; Q3THJ6; A2AM97; B7FAU6; O89059 60S ribosomal protein L10-like OS=Mus musculus OX=10090 GN=Rpl10l PE=2 SV=1; 60S ribosomal protein L10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=4 SV=1; 60S ribosomal protein L10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=1 SV=1; Ribosomal_L16 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1; Ribosomal protein 10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=4 SV=1; QM protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.5426 0 1 1 1 487.27515 973.54302 973.54168 1.37 0.00067 0/0 0 0 31857832 HCD 30 MS2 43.74092 952.7 31.857 50.9745 13855 13855 13848 QEplus033719.raw F4 1056.2 771 1109 802.2 954.7 1023.2 174 2.23 1 FALSE 0.0057 0.09575 0.018 -250 57740 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAAQAAAQTNSNAAGK [K].sAAQAAAQTNSNAAGk.[Q] N-Term(TMT6plex); K16(TMT6plex) 11 A0A0N4SV32 Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1 A0A0N4SUQ1; A0A0N4SV32; Q9CY58-3; A0A0N4SUN8; Q9CY58-4; A0A0N4SWH2; Q3V274; Q3UJK2; Q9CY58; Q9CY58-2; Q3UMP4 Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Isoform 3 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Isoform 4 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; HABP4_PAI-RBP1 domain-containing protein OS=Mus musculus OX=10090 GN=Serbp1 PE=2 SV=1; HABP4_PAI-RBP1 domain-containing protein OS=Mus musculus OX=10090 GN=Serbp1 PE=2 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=2; Isoform 2 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1 0 3 3 0.8015 0 1 1 1 640.34973 1919.03464 1919.03467 -0.02 -0.00001 0/0 0 0 12383860 HCD 30 MS2 5.529552 498.2 110 50.977 13856 13856 13848 QEplus033719.raw F4 554.5 431.8 522.9 369.4 580.8 529.9 437 6.7 1 FALSE 1.14E-05 3.04E-13 2.475 -250 57746 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEGGTENDLR [K].mEGGTENDLR.[I] N-Term(TMT6plex) 6 Q99MR6 Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1 Q99MR6-3; Q99MR6; Q99MR6-4; A0A0G2JDF1; A0A0G2JDN3; Q99MR6-2 Isoform C of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1; Isoform D of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Serrate RNA effector molecule homolog (Fragment) OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1; Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1; Isoform B of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt 0 2 2 0.4796 0 1 1 1 675.83063 1350.65398 1350.65209 1.39 0.00094 0/0 0 0 7042544 HCD 30 MS2 0 496.2 110 50.9795 13857 13857 13848 QEplus033719.raw F4 490.4 473.4 524.3 414.1 573.5 501.4 84 3.19 1 FALSE 1.14E-05 2.00E-07 1.37 -250 57754 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APGATGLATR [R].aPGATGLATR.[D] N-Term(TMT6plex) 2 Q3TC93 HCLS1-binding protein 3 OS=Mus musculus OX=10090 GN=Hs1bp3 PE=1 SV=2 A0A1W2P6R8; Q3TC93 HCLS1-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Hs1bp3 PE=1 SV=1; HCLS1-binding protein 3 OS=Mus musculus OX=10090 GN=Hs1bp3 PE=1 SV=2 0 2 2 0.2601 0 1 1 1 572.33893 1143.67058 1143.66834 1.96 0.00112 0/0 0 0 7017709 HCD 30 MS2 44.41397 639.7 110 50.982 13858 13858 13848 QEplus033719.raw F4 640.1 536 690.5 577.4 623.2 771.1 250 2.23 1 FALSE 0.0006477 0.009966 0.405 -250 57764 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANESSPKPAGPPPER [K].aNESSPkPAGPPPER.[D] N-Term(TMT6plex); K7(TMT6plex) 2 A0A0A6YWH2 Allograft inflammatory factor 1-like OS=Mus musculus OX=10090 GN=Aif1l PE=1 SV=1 A0A0A6YWH2; Q9EQX4 Allograft inflammatory factor 1-like OS=Mus musculus OX=10090 GN=Aif1l PE=1 SV=1; Allograft inflammatory factor 1-like OS=Mus musculus OX=10090 GN=Aif1l PE=1 SV=1 0 3 3 0.7469 0 1 1 1 664.70319 1992.095 1992.09146 1.78 0.00118 0/0 0 0 7981551.5 HCD 30 MS2 0 404.9 110 50.9893 13860 13860 13859 QEplus033719.raw F4 409.3 240.8 538 431.2 246.6 563.3 402 4.07 1 FALSE 1.14E-05 8.00E-11 2.015 -250 57783 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVTPGK [K].aAVTPGk.[K] N-Term(TMT6plex); K7(TMT6plex) 7 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; P09405; Q3TGR3; Q3TT41; A0A087WRM5; Q8CE30; Q9CT46 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 2 2 0.1875 0 1 1 1 551.35626 1101.70525 1101.70322 1.84 0.00102 0/0 0 0 29760614 HCD 30 MS2 56.82199 815.6 23.848 50.9964 13863 13863 13859 QEplus033719.raw F4 1036.7 681.5 968.7 647.2 804.7 754.6 138 2.4 1 FALSE 0.0007533 0.01061 0.395 -250 57793 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGFAGDDAPR [K].aGFAGDDAPR.[A] N-Term(TMT6plex) 36 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q3UAF6; Q3UD81; Q3U122; E9Q1F2; Q3UAA9; F6WX90; A0A1D5RM20; B2RRX1; A0A494B9T3; Q3U5R4; A1E281; Q3UAF7; G3UZ07; P62737; G3UYG0; P68134; Q3UBP6; D3YZY0; E9Q5F4; B1ATY1; P68033; P63260; Q61852; Q3UA89; Q3UGS0; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=4 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 2 2 0.7599 0 1 1 1 603.30994 1205.6126 1205.61122 1.14 0.00069 0/0 0 0 27203230 HCD 30 MS2 52.34887 1290.4 65.867 50.9986 13864 13864 13859 QEplus033719.raw F4 1327.3 953.8 1314.4 1166.7 1540.5 1439.9 142 3.54 4 FALSE 1.14E-05 1.59E-07 1.389 -250 57800 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLDPAQSASR [K].kLDPAQSASR.[E] N-Term(TMT6plex); K1(TMT6plex) 9 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; B2RXX6; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 1 3 3 0.5369 0 1 1 1 510.9726 1530.90323 1530.90041 1.84 0.00094 0/0 0 0 23984176 HCD 30 MS2 4.793057 1152.5 95.941 51.0009 13865 13865 13859 QEplus033719.raw F4 1328.9 972.6 1342.4 864.6 1113.8 1292.9 496 2.98 2 FALSE 1.14E-05 1.22E-08 1.601 -250 57809 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESDGFREEK [R].eSDGFREEk.[N] N-Term(TMT6plex); K9(TMT6plex) 10 Q8K019 Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=2 Q8K019; A0A087WRN1; F8WI22; Q3TRC6; Q8K019-3; Q8K019-2; A0A087WQA0; Q3UR37; Q3UDL9; Q3TSZ0 Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=2; Bcl-2-associated transcription factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1; Isoform 3 of Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1; Isoform 2 of Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1; Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1 1 3 3 0.4272 0 1 1 1 518.94427 1554.81827 1554.81641 1.2 0.00062 0/0 0 0 23288414 HCD 30 MS2 14.42106 1095.3 67.875 51.0032 13866 13866 13859 QEplus033719.raw F4 1146.6 1005.1 1169.1 828.6 1259 1163.5 257 2.13 1 FALSE 0.001395 0.01994 0.282 -250 57818 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENTQTTIK [R].eNTQTTIk.[L] N-Term(TMT6plex); K8(TMT6plex) 17 Q5FWJ5 Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 P61979-3; Q3U9Q3; H3BJS9; A0A286YCM2; Q3TUA1; Q5FWJ5; H3BKD0; H3BK96; P61979; H3BLL4; A0A286YDM3; B2M1R6; Q3TG17; Q3U6X2; Q3TL71; Q3TJ38; H3BKI8 Isoform 3 of Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1 0 2 2 0.4383 0 1 1 1 696.90875 1392.81023 1392.80987 0.26 0.00018 0/0 0 0 18411854 HCD 30 MS2 29.99471 1243.2 110 51.0057 13867 13867 13859 QEplus033719.raw F4 1424.8 1090.3 1235.2 1126.4 1392.8 1189.4 382 3.08 1 FALSE 1.14E-05 0.0001432 0.827 -250 57835 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAAETVTK [R].sAAETVTk.[G] N-Term(TMT6plex); K8(TMT6plex) 2 Q4KL76 "10 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 SV=1" Q9JI95; Q4KL76 "CPN10-like protein OS=Mus musculus OX=10090 GN=Hspe1-rs1 PE=3 SV=1; 10 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 SV=1" 0 2 2 0.4114 0 1 1 1 632.87982 1264.75237 1264.75129 0.85 0.00054 0/0 0 0 36483148 HCD 30 MS2 30.28905 1587.3 110 51.0178 13871 13871 13870 QEplus033719.raw F4 2049.3 1164.3 1691.9 1653.5 1501 1463.7 373 3.5 1 FALSE 1.14E-05 6.24E-05 0.896 -250 57859 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVTEAHVDQK [K].gVTEAHVDQk.[N] N-Term(TMT6plex); K10(TMT6plex) 1 Q9D172 "Glutamine amidotransferase-like class 1 domain-containing protein 3A, mitochondrial OS=Mus musculus OX=10090 GN=Gatd3a PE=1 SV=1" Q9D172 "Glutamine amidotransferase-like class 1 domain-containing protein 3A, mitochondrial OS=Mus musculus OX=10090 GN=Gatd3a PE=1 SV=1" 0 3 3 0.7019 0 1 1 1 514.6283 1541.87033 1541.86878 1.01 0.00052 0/0 0 0 50810692 HCD 30 MS2 41.45642 567.2 21.522 51.0316 13877 13877 13870 QEplus033719.raw F4 644.7 378.4 580.2 622.9 469 707.7 400 4.73 1 FALSE 1.14E-05 1.62E-08 1.577 -250 57865 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YIEACAR [K].yIEAcAR.[R] N-Term(TMT6plex); C5(Carbamidomethyl) 6 Q3TS38 UDP-glucose 6-dehydrogenase OS=Mus musculus OX=10090 GN=Ugdh PE=1 SV=1 Q3TS38; Q3TJ71; Q3TI06; Q3TJE8; D3YXP9; Q3UIZ1 UDP-glucose 6-dehydrogenase OS=Mus musculus OX=10090 GN=Ugdh PE=1 SV=1; UDP-glucose 6-dehydrogenase OS=Mus musculus OX=10090 GN=Ugdh PE=2 SV=1; UDP-glucose 6-dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ugdh PE=2 SV=1; UDP-glucose 6-dehydrogenase OS=Mus musculus OX=10090 GN=Ugdh PE=2 SV=1; UDP-glucose 6-dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ugdh PE=1 SV=8; UDP-glucose 6-dehydrogenase OS=Mus musculus OX=10090 GN=Ugdh PE=2 SV=1 0 2 2 0.5873 0 1 1 1 556.29205 1111.57683 1111.57675 0.08 0.00004 0/0 0 0 31871168 HCD 30 MS2 14.53961 960.5 62.447 51.0338 13878 13878 13870 QEplus033719.raw F4 942.6 1014.3 1024.6 675.6 1300.2 805.9 132 2.52 1 FALSE 0.001719 0.02872 0.223 -250 57881 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFHQNVK [K].eFHQNVk.[L] N-Term(TMT6plex); K7(TMT6plex) 1 Q9D1P4 Cysteine and histidine-rich domain-containing protein 1 OS=Mus musculus OX=10090 GN=Chordc1 PE=1 SV=1 Q9D1P4 Cysteine and histidine-rich domain-containing protein 1 OS=Mus musculus OX=10090 GN=Chordc1 PE=1 SV=1 0 3 3 0.5831 0 1 1 1 453.93121 1359.77909 1359.77851 0.43 0.00019 0/0 0 0 22805378 HCD 30 MS2 43.83549 920.7 40.851 51.0383 13880 13880 13870 QEplus033719.raw F4 1201.8 642 961 721.5 941.6 1056.3 418 3.31 1 FALSE 0.001615 0.02609 0.238 -250 57884 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQSEEIQK [K].gQSEEIQk.[K] N-Term(TMT6plex); K8(TMT6plex) 2 Q3UW40 TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1 Q3UW40; Q8BP67 TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1; 60S ribosomal protein L24 OS=Mus musculus OX=10090 GN=Rpl24 PE=1 SV=2 0 2 2 0.3706 0 1 1 1 688.89355 1376.77983 1376.77857 0.92 0.00063 0/0 0 0 43572892 HCD 30 MS2 7.342555 1022.5 59.046 51.0456 13882 13882 13881 QEplus033719.raw F4 1003.7 872.6 1081.4 906 1228.3 1043 459 2.86 1 FALSE 1.14E-05 0.0005421 0.715 -250 57899 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDLADKR [K].tDLADkR.[Q-] N-Term(TMT6plex); K6(TMT6plex) 5 Q0PD54 Rab6A OS=Mus musculus OX=10090 GN=Rab6a PE=2 SV=1 Q0PD53; P35279-2; D3YV69; A0A1L1SRS6; Q0PD54 Rab6B OS=Mus musculus OX=10090 GN=Rab6b PE=1 SV=1; Isoform 2 of Ras-related protein Rab-6A OS=Mus musculus OX=10090 GN=Rab6a; Ras-related protein Rab-6A OS=Mus musculus OX=10090 GN=Rab6a PE=1 SV=1; Ras-related protein Rab-6B OS=Mus musculus OX=10090 GN=Rab6b PE=1 SV=1; Rab6A OS=Mus musculus OX=10090 GN=Rab6a PE=2 SV=1 1 3 3 0.2304 0 1 1 1 426.25894 1276.76227 1276.76252 -0.2 -0.00008 0/0 0 0 44941916 HCD 30 MS2 31.43571 765.4 25.829 51.0524 13885 13885 13881 QEplus033719.raw F4 778.8 571.2 785.9 757.4 852.3 846.5 475 2.17 1 FALSE 0.001541 0.0231 0.257 -250 57906 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLQPSAAR [K].vLQPSAAR.[N] N-Term(TMT6plex) 5 Q8C2S9 Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1 Q8C2S9; Q3U7S9; Q9EQK5; E9Q3X0; Q3THX5 Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=1 SV=4; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=1 SV=1; Major vault protein OS=Mus musculus OX=10090 GN=Mvp PE=2 SV=1 0 2 2 0.6065 0 1 1 1 535.83038 1070.65349 1070.65196 1.43 0.00077 0/0 0 0 29676876 HCD 30 MS2 31.80436 1261.2 110 51.0594 13888 13888 13881 QEplus033719.raw F4 1371.4 841 1462.6 1341.9 933.7 1616.3 128 2.77 1 FALSE 1.14E-05 0.0002248 0.79 -250 57911 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENTQTTIK [R].eNTQTTIk.[L] N-Term(TMT6plex); K8(TMT6plex) 17 Q5FWJ5 Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 P61979-3; Q3U9Q3; H3BJS9; A0A286YCM2; Q3TUA1; Q5FWJ5; H3BKD0; H3BK96; P61979; H3BLL4; A0A286YDM3; B2M1R6; Q3TG17; Q3U6X2; Q3TL71; Q3TJ38; H3BKI8 Isoform 3 of Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1 0 3 3 0.3975 0 1 1 1 464.94217 1392.81195 1392.80987 1.5 0.0007 0/0 0 0 26475720 HCD 30 MS2 47.28179 942.1 44.602 51.0617 13889 13889 13881 QEplus033719.raw F4 1058.1 645.2 858.9 1040.2 909.8 1140.7 421 3.17 1 FALSE 0.001473 0.02125 0.271 -250 57919 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAESPSWR [K].dAESPSWR.[S] N-Term(TMT6plex) 4 Q9WTI7-3 Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c Q9WTI7; Q9WTI7-3; Q9WTI7-2; Q9WTI7-4 Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c PE=1 SV=2; Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Isoform 2 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Isoform 4 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c 0 2 2 0.3014 0 1 1 1 588.79651 1176.58574 1176.58467 0.91 0.00054 0/0 0 0 14239068 HCD 30 MS2 24.37129 901.9 110 51.0642 13890 13890 13881 QEplus033719.raw F4 959.2 835.5 988.3 748.4 987.1 892.9 94 2.09 1 FALSE 0.004641 0.08207 0.056 -250 57938 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAAQAAAQTNSNAAGK [K].sAAQAAAQTNSNAAGk.[Q] N-Term(TMT6plex); K16(TMT6plex) 11 A0A0N4SV32 Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1 A0A0N4SUQ1; A0A0N4SV32; Q9CY58-3; A0A0N4SUN8; Q9CY58-4; A0A0N4SWH2; Q3V274; Q3UJK2; Q9CY58; Q9CY58-2; Q3UMP4 Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Isoform 3 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Isoform 4 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; HABP4_PAI-RBP1 domain-containing protein OS=Mus musculus OX=10090 GN=Serbp1 PE=2 SV=1; HABP4_PAI-RBP1 domain-containing protein OS=Mus musculus OX=10090 GN=Serbp1 PE=2 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=2; Isoform 2 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1 0 2 2 0.7923 0 1 1 1 960.02289 1919.0385 1919.03467 1.99 0.00191 0/0 0 0 13078383 HCD 30 MS2 0 138.6 110 51.0738 13893 13893 13892 QEplus033719.raw F4 117.1 105 146.4 106.4 174.8 181.9 440 7.03 1 FALSE 1.14E-05 6.31E-16 3.817 -250 57955 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQSEEIQK [K].gQSEEIQk.[K] N-Term(TMT6plex); K8(TMT6plex) 2 Q3UW40 TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1 Q3UW40; Q8BP67 TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1; 60S ribosomal protein L24 OS=Mus musculus OX=10090 GN=Rpl24 PE=1 SV=2 0 3 3 0.3529 0 1 1 1 459.59818 1376.77997 1376.77857 1.02 0.00047 0/0 0 0 25223592 HCD 30 MS2 58.07339 780.7 36.848 51.0785 13895 13895 13892 QEplus033719.raw F4 705.3 726.7 923.5 632.7 774.6 921.4 459 2.72 1 FALSE 0.0006294 0.009648 0.41 -250 57966 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STMQELNSR [K].sTMQELNSR.[L] N-Term(TMT6plex) 1 P35527 "SWISS-PROT:P35527 Tax_Id=9606 Gene_Symbol=KRT9 Keratin, type I cytoskeletal 9" P35527 "SWISS-PROT:P35527 Tax_Id=9606 Gene_Symbol=KRT9 Keratin, type I cytoskeletal 9" 0 2 2 0.5921 0 1 1 1 647.8349 1294.66252 1294.66227 0.2 0.00013 0/0 0 0 14102054 HCD 30 MS2 41.09327 917.1 110 51.0836 13897 13897 13892 QEplus033719.raw F4 918.5 826.7 700.6 952.8 1251 853.3 144 3.31 1 TRUE 1.14E-05 3.23E-05 0.951 -250 57979 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESYIGSPR [R].eSYIGSPR.[A] N-Term(TMT6plex) 6 Q8BJS4 SUN domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sun2 PE=1 SV=3 E0CY39; Q8BJS4; Q8BJS4-3; Q6A022; Q8BJS4-2; Q4QQM3 SUN domain-containing protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Sun2 PE=1 SV=1; SUN domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sun2 PE=1 SV=3; Isoform 3 of SUN domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sun2; MKIAA0668 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0668 PE=4 SV=1; Isoform 2 of SUN domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sun2; Unc84b protein OS=Mus musculus OX=10090 GN=Sun2 PE=2 SV=1 0 2 2 0.5167 0 1 1 1 569.30914 1137.61101 1137.61015 0.75 0.00043 0/0 0 0 12393290 HCD 30 MS2 41.23226 1108.2 110 51.0883 13899 13899 13892 QEplus033719.raw F4 1332.5 982.5 1259 886.4 1185.5 1003.2 212 2.4 1 FALSE 8.67E-05 0.00287 0.563 -250 57983 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YIAMCHER [R].yIAMcHER.[Q] N-Term(TMT6plex); C5(Carbamidomethyl) 3 Q3UDI8 DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=2 SV=1 Q3UDI8; Q61881; Q3V122 DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=2 SV=1; DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=1 SV=1; DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=2 SV=1 0 3 3 0.7448 0 1 1 1 436.88522 1308.64112 1308.63903 1.6 0.0007 0/0 0 0 11598369 HCD 30 MS2 35.60565 686.8 110 51.0908 13900 13900 13892 QEplus033719.raw F4 747.5 598 700.3 577.1 750.4 747.2 101 3.84 1 FALSE 1.14E-05 0.0002139 0.794 -250 57991 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEVTDEK [K].aEVTDEk.[L] N-Term(TMT6plex); K7(TMT6plex) 2 Q4VA93 Protein kinase C OS=Mus musculus OX=10090 GN=Prkca PE=1 SV=1 P20444; Q4VA93 Protein kinase C alpha type OS=Mus musculus OX=10090 GN=Prkca PE=1 SV=3; Protein kinase C OS=Mus musculus OX=10090 GN=Prkca PE=1 SV=1 0 2 2 0.1659 0 1 1 1 625.35693 1249.70659 1249.704 2.07 0.00129 0/0 0 0 9916456 HCD 30 MS2 21.72746 872.6 110 51.0933 13901 13901 13892 QEplus033719.raw F4 1110.8 647.4 898.9 770 1041.7 766.5 410 2.29 1 FALSE 0.0004793 0.007625 0.446 -250 57999 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LESENNEYER [K].lESENNEYER.[A] N-Term(TMT6plex) 1 Q91YR7 Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1 Q91YR7 Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1 0 2 2 0.472 0 1 1 1 756.36365 1511.72002 1511.71753 1.64 0.00124 0/0 0 0 5510684 HCD 30 MS2 7.163362 368.1 110 51.0959 13902 13902 13892 QEplus033719.raw F4 362.2 303 430 341.3 390.2 381.8 71 2.5 1 FALSE 1.14E-05 0.0002808 0.771 -250 58016 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQVDQEEGGHQK [K].mQVDQEEGGHQk.[C] N-Term(TMT6plex); K12(TMT6plex) 3 P48722 Heat shock 70 kDa protein 4L OS=Mus musculus OX=10090 GN=Hspa4l PE=1 SV=2 P48722; P48722-2; E0CY23 Heat shock 70 kDa protein 4L OS=Mus musculus OX=10090 GN=Hspa4l PE=1 SV=2; Isoform 2 of Heat shock 70 kDa protein 4L OS=Mus musculus OX=10090 GN=Hspa4l; Heat shock 70 kDa protein 4L (Fragment) OS=Mus musculus OX=10090 GN=Hspa4l PE=1 SV=1 0 3 3 0.7283 0 1 1 1 615.31744 1843.93778 1843.93727 0.28 0.00017 0/0 0 0 3118622 HCD 30 MS2 35.96472 303.3 110 51.1057 13905 13905 13903 QEplus033719.raw F4 305.4 211.1 316.2 321.8 280.5 384.6 241 5.08 1 FALSE 1.14E-05 2.53E-12 2.3 -250 58029 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAAETVTK [R].sAAETVTk.[G] N-Term(TMT6plex); K8(TMT6plex) 2 Q4KL76 "10 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 SV=1" Q9JI95; Q4KL76 "CPN10-like protein OS=Mus musculus OX=10090 GN=Hspe1-rs1 PE=3 SV=1; 10 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 SV=1" 0 3 3 0.3933 0 1 1 1 422.25543 1264.75174 1264.75129 0.36 0.00015 0/0 0 0 29375300 HCD 30 MS2 16.3759 505.9 34.824 51.1102 13907 13907 13903 QEplus033719.raw F4 603.3 384.5 523.7 476.3 561.7 486 381 2.67 1 FALSE 0.001395 0.01974 0.283 -250 58036 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIQTAVR [R].eIQTAVR.[L] N-Term(TMT6plex) 14 Q64475; Q64525 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3;Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64475; Q8CGP2; Q64525; Q8CGP1; P10854; A0JNS9; Q64478; P70696; Q8CGP2-2; Q8CBB6; Q6ZWY9; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 0 2 2 0.2764 0 1 1 1 523.31268 1045.61809 1045.62032 -2.14 -0.00112 0/0 0 0 28319910 HCD 30 MS2 35.15542 1249.3 43.736 51.1124 13908 13908 13903 QEplus033719.raw F4 1406.5 1074.7 1503.3 1080.7 1091.6 1338.9 243 2.46 2 FALSE 0.0005373 0.008179 0.436 -250 58043 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVQGILR [R].hVQGILR.[G] N-Term(TMT6plex) 2 P62309 Small nuclear ribonucleoprotein G OS=Mus musculus OX=10090 GN=Snrpg PE=1 SV=1 Q3V424; P62309 Small nuclear ribonucleoprotein G OS=Mus musculus OX=10090 GN=Snrpg PE=2 SV=1; Small nuclear ribonucleoprotein G OS=Mus musculus OX=10090 GN=Snrpg PE=1 SV=1 0 3 3 0.2664 0 1 1 1 351.22412 1051.65781 1051.65738 0.41 0.00014 0/0 0 0 19908990 HCD 30 MS2 43.06211 408 43.417 51.1147 13909 13909 13903 QEplus033719.raw F4 350.4 369.4 437.9 332.3 448.8 509.2 31 3.04 1 FALSE 0.0009542 0.01295 0.36 -250 58053 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MSSSFDR [R].mSSSFDR.[M] N-Term(TMT6plex) 9 A2ATP6 Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=2 A2ATP6; Q8C854-1; A7UQY4; Q8C854-3; F6XJA1; A2ATP5; G8JL68; Q8C854; Q8C854-2 Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=2; Isoform 3 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Isoform 2 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2; Myelin expression factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Isoform 4 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 0 2 2 0.4521 0 1 1 1 529.76062 1058.51396 1058.51381 0.14 0.00008 0/0 0 0 6298267.5 HCD 30 MS2 53.37877 971.9 110 51.1172 13910 13910 13903 QEplus033719.raw F4 1053 876.4 1116.8 754.1 1037 994.1 24 2.19 1 FALSE 0.003252 0.0634 0.105 -250 58061 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPGNTEPVK [R].nPGNTEPVk.[A] N-Term(TMT6plex); K9(TMT6plex) 2 Q5SWD9 Pre-rRNA-processing protein TSR1 homolog OS=Mus musculus OX=10090 GN=Tsr1 PE=1 SV=1 Q5SWD9; Q5SWD9-2 Pre-rRNA-processing protein TSR1 homolog OS=Mus musculus OX=10090 GN=Tsr1 PE=1 SV=1; Isoform 2 of Pre-rRNA-processing protein TSR1 homolog OS=Mus musculus OX=10090 GN=Tsr1 0 2 2 0.6528 0 1 1 1 707.40814 1413.80901 1413.8102 -0.84 -0.0006 0/0 0 0 4479279.5 HCD 30 MS2 0 315.5 110 51.1197 13911 13911 13903 QEplus033719.raw F4 334.3 278.2 352.7 226 351.1 350.9 330 2.65 1 FALSE 1.14E-05 4.41E-05 0.925 -250 58074 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITDVSSDR [K].iTDVSSDR.[C] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.2812 0 1 1 1 561.30371 1121.60015 1121.59998 0.14 0.00008 0/0 0 0 17376354 HCD 30 MS2 0 994.6 110 51.1244 13913 13913 13903 QEplus033719.raw F4 1194.4 435.2 877.7 1377.3 707.6 1375.4 162 2.56 2 FALSE 1.14E-05 0.0003956 0.742 -250 58097 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPGPGAQSALR [K].tPGPGAQSALR.[A] N-Term(TMT6plex) 5 O70569 Ribosomal protein S14 OS=Mus musculus OX=10090 GN=rps14 PE=3 SV=1 O70569; D3YVF4; Q3UJS5; D3Z7I1; P62264 Ribosomal protein S14 OS=Mus musculus OX=10090 GN=rps14 PE=3 SV=1; 40S ribosomal protein S14 (Fragment) OS=Mus musculus OX=10090 GN=Rps14 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rps14 PE=2 SV=1; 40S ribosomal protein S14 (Fragment) OS=Mus musculus OX=10090 GN=Rps14 PE=1 SV=1; 40S ribosomal protein S14 OS=Mus musculus OX=10090 GN=Rps14 PE=1 SV=3 0 2 2 0.6646 0 1 1 1 642.36749 1283.72771 1283.72691 0.62 0.0004 0/0 0 0 44400140 HCD 30 MS2 7.04208 587.4 45.585 51.1365 13917 13917 13914 QEplus033719.raw F4 610.2 497.9 679.8 460 633.2 643.4 307 3.28 1 FALSE 1.14E-05 1.81E-06 1.188 -250 58103 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASEALK [K].aSEALk.[V] N-Term(TMT6plex); K6(TMT6plex) 3 Q571A6 Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif3c PE=2 SV=1 Q571A6; O35066; Q3UZU0 Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif3c PE=2 SV=1; Kinesin-like protein KIF3C OS=Mus musculus OX=10090 GN=Kif3c PE=1 SV=3; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif3c PE=2 SV=1 0 2 2 0.201 0 1 1 1 538.83972 1076.67217 1076.67158 0.54 0.00029 0/0 0 0 36135816 HCD 30 MS2 36.70084 999.9 24.868 51.1388 13918 13918 13914 QEplus033719.raw F4 1442.6 656 1099 926.6 726.5 1148.5 193 2.09 1 FALSE 0.005324 0.09069 0.032 -250 58113 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQEIVVSR [K].qQEIVVSR.[G] N-Term(TMT6plex) 2 B2RSV4 "Splicing factor 3b, subunit 3 OS=Mus musculus OX=10090 GN=Sf3b3 PE=2 SV=1" Q921M3-2; B2RSV4 "Isoform 2 of Splicing factor 3B subunit 3 OS=Mus musculus OX=10090 GN=Sf3b3; Splicing factor 3b, subunit 3 OS=Mus musculus OX=10090 GN=Sf3b3 PE=2 SV=1" 0 2 2 0.4964 0 1 1 1 594.35175 1187.69621 1187.69455 1.4 0.00083 0/0 0 0 9244821 HCD 30 MS2 0 739.5 110 51.1413 13919 13919 13914 QEplus033719.raw F4 800.8 681.4 818.2 536 843.3 757.1 298 2.74 1 FALSE 0.0001504 0.003391 0.545 -250 58140 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQPSLRPK [R].sQPSLRPk.[D] N-Term(TMT6plex); K8(TMT6plex) 5 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q91VL4; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Col1a2 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 3 3 0.5556 0 1 1 1 457.62253 1370.85303 1370.852 0.75 0.00034 0/0 0 0 66909488 HCD 30 MS2 39.50943 766.2 18.206 51.1605 13926 13926 13925 QEplus033719.raw F4 725.5 667.4 844.2 694.1 855.1 810.7 246 2.7 1 FALSE 0.0005848 0.008736 0.426 -250 58151 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPDADLK [K].rPDADLk.[T] N-Term(TMT6plex); K7(TMT6plex) 2 Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 Q3TXE5; Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 0 3 3 0.5183 0 1 1 1 424.9277 1272.76856 1272.76761 0.75 0.00032 0/0 0 0 34966764 HCD 30 MS2 16.13784 738.8 26.484 51.1676 13929 13929 13925 QEplus033719.raw F4 751.4 574.4 799 664.7 842 801.1 353 3.28 1 FALSE 5.44E-05 0.002393 0.581 -250 58156 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVEDEATK [K].aVEDEATk.[G] N-Term(TMT6plex); K8(TMT6plex) 5 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q0V930; Q3UHS6; Q3TBC3; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.5327 0 1 1 1 660.87457 1320.74187 1320.74112 0.57 0.00038 0/0 0 0 15791989 HCD 30 MS2 18.81405 1152.3 110 51.1701 13930 13930 13925 QEplus033719.raw F4 1342.2 1014.5 1111.4 812 1693.6 940.2 458 3.21 1 FALSE 1.14E-05 0.0001044 0.854 -250 58171 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLQSIGTENTEENR [K].rLQSIGTENTEENR.[R] N-Term(TMT6plex) 9 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 A0A0U1RPT5; D3YWI1; A0A0U1RPN8; A6ZI47; D3YV98; D3Z510; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart2 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=2; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 1 3 3 0.7088 0 1 1 1 625.99591 1875.97318 1875.97218 0.53 0.00033 0/0 0 0 9309986 HCD 30 MS2 19.84727 471.4 110 51.1773 13933 13933 13925 QEplus033719.raw F4 523.2 353.3 509.9 415 506.4 520.6 309 5.94 1 FALSE 1.14E-05 6.31E-16 3.13 -250 58205 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVQGILR [R].hVQGILR.[G] N-Term(TMT6plex) 2 P62309 Small nuclear ribonucleoprotein G OS=Mus musculus OX=10090 GN=Snrpg PE=1 SV=1 Q3V424; P62309 Small nuclear ribonucleoprotein G OS=Mus musculus OX=10090 GN=Snrpg PE=2 SV=1; Small nuclear ribonucleoprotein G OS=Mus musculus OX=10090 GN=Snrpg PE=1 SV=1 0 2 2 0.2449 0 1 1 1 526.33374 1051.6602 1051.65738 2.69 0.00141 0/0 0 0 6020425 HCD 30 MS2 53.70233 905.2 110 51.1921 13938 13938 13936 QEplus033719.raw F4 1033.4 754.3 1037.6 682.1 970.1 953.9 51 2.45 1 FALSE 0.001886 0.03189 0.207 -250 58226 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STETALYR [R].sTETALYR.[K] N-Term(TMT6plex) 3 O35465-2 Isoform 2 of Peptidyl-prolyl cis-trans isomerase FKBP8 OS=Mus musculus OX=10090 GN=Fkbp8 O35465; O35465-2; C9K0Z7 Peptidyl-prolyl cis-trans isomerase FKBP8 OS=Mus musculus OX=10090 GN=Fkbp8 PE=1 SV=2; Isoform 2 of Peptidyl-prolyl cis-trans isomerase FKBP8 OS=Mus musculus OX=10090 GN=Fkbp8; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp8 PE=2 SV=1 0 2 2 0.5065 0 1 1 1 585.32141 1169.63555 1169.63637 -0.7 -0.00041 0/0 0 0 4686828.5 HCD 30 MS2 46.44921 771.9 110 51.1994 13941 13941 13936 QEplus033719.raw F4 863.1 629.8 807.6 683.8 863.4 783.8 158 2.31 1 FALSE 0.00131 0.01796 0.3 -250 58236 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDCTANTNTCNK [K].vDcTANTNTcNk.[Y] N-Term(TMT6plex); C3(Carbamidomethyl); C10(Carbamidomethyl); K12(TMT6plex) 2 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 P27773; F6Q404 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2; Protein disulfide-isomerase A3 (Fragment) OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=1 0 3 3 0.6301 0 1 1 1 619.30646 1855.90482 1855.90425 0.31 0.00019 0/0 0 0 3143929.5 HCD 30 MS2 33.04829 392.9 110 51.2019 13942 13942 13936 QEplus033719.raw F4 415.3 315.5 416.5 292.4 482.4 435.3 146 3.65 1 FALSE 1.14E-05 1.14E-06 1.227 -250 58241 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDGTLNPNGVR [R].sDGTLNPNGVR.[F] N-Term(TMT6plex) 2 Q9D2R0 Acetoacetyl-CoA synthetase OS=Mus musculus OX=10090 GN=Aacs PE=1 SV=1 Q8K3J7; Q9D2R0 SUR5 (Fragment) OS=Mus musculus OX=10090 GN=Aacs PE=2 SV=1; Acetoacetyl-CoA synthetase OS=Mus musculus OX=10090 GN=Aacs PE=1 SV=1 0 2 2 0.5855 0 1 1 1 679.86603 1358.72478 1358.72256 1.63 0.00111 0/0 0 0 8188088 HCD 30 MS2 0 409.9 110 51.2044 13943 13943 13936 QEplus033719.raw F4 413.8 416.4 498.4 287.7 415.9 427.5 271 3.45 1 FALSE 1.14E-05 1.52E-09 1.772 -250 58248 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVQAAQSEAK [K].kVQAAQSEAk.[V] N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex) 11 Q8CAQ8; A0A0U1RP81 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1;MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q8CAQ8; E9QAY6; Q8CAQ8-2; A0A0U1RP81; Q3TVZ5; Q2YDW0; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1 1 3 3 0.7152 0 1 1 1 583.02838 1747.07059 1747.06809 1.43 0.00083 0/0 0 0 7596255.5 HCD 30 MS2 42.68808 710.3 110 51.2069 13944 13944 13936 QEplus033719.raw F4 1006.5 435.1 720.5 845.2 498.5 755.7 354 4.46 2 FALSE 1.14E-05 3.34E-10 1.898 -250 58262 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPPPNTDPNLR [R].nPPPNTDPNLR.[I] N-Term(TMT6plex) 5 A2AJ72 Far upstream element (FUSE)-binding protein 3 OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1 A2AJ72; A0A0A6YVV5; Q3TIX6; F7AM43; Q3ULP9 Far upstream element (FUSE)-binding protein 3 OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1; Far upstream element (FUSE)-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1; Far upstream element (FUSE)-binding protein 3 OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1; Far upstream element (FUSE)-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fubp3 PE=2 SV=1 0 2 2 0.6323 0 1 1 1 732.39386 1463.78044 1463.78041 0.02 0.00002 0/0 0 0 5388687.5 HCD 30 MS2 0 264.9 110 51.2119 13946 13946 13936 QEplus033719.raw F4 250.2 243.1 272.7 174.3 415.6 233.6 331 2.23 1 FALSE 1.14E-05 0.0006357 0.702 -250 58287 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQLDCR [K].vQLDcR.[E] N-Term(TMT6plex); C5(Carbamidomethyl) 3 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q3UXJ8; Q8VHX6-2; Q8VHX6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flnc PE=2 SV=1; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.4444 0 1 1 1 510.27972 1019.55217 1019.55053 1.61 0.00082 0/0 0 0 95310512 HCD 30 MS2 17.0973 794.3 12.338 51.224 13950 13950 13947 QEplus033719.raw F4 880 470.9 971.3 845.7 447.5 1150.7 316 1.89 1 FALSE 0.002793 0.05481 0.128 -250 58298 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRDDIVK [R].dRDDIVk.[T] N-Term(TMT6plex); K7(TMT6plex) 3 G5E829 Plasma membrane calcium-transporting ATPase 1 OS=Mus musculus OX=10090 GN=Atp2b1 PE=1 SV=1 Q8K314; G5E829; A0A1W2P867 Atp2b1 protein (Fragment) OS=Mus musculus OX=10090 GN=Atp2b1 PE=2 SV=1; Plasma membrane calcium-transporting ATPase 1 OS=Mus musculus OX=10090 GN=Atp2b1 PE=1 SV=1; Plasma membrane calcium-transporting ATPase 1 (Fragment) OS=Mus musculus OX=10090 GN=Atp2b1 PE=1 SV=1 1 3 3 0.5032 0 1 1 1 440.26282 1318.7739 1318.77309 0.62 0.00027 0/0 0 0 15476789 HCD 30 MS2 35.60412 921.4 41.885 51.2308 13953 13953 13947 QEplus033719.raw F4 907.7 845.4 1049.7 773.5 925.2 1027.1 539 3.12 1 FALSE 0.0005556 0.008533 0.429 -250 58303 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPDADLK [K].rPDADLk.[T] N-Term(TMT6plex); K7(TMT6plex) 2 Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 Q3TXE5; Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 0 2 2 0.3648 0 1 1 1 636.88873 1272.77019 1272.76761 2.03 0.00129 0/0 0 0 10243519 HCD 30 MS2 0 645.5 110 51.2333 13954 13954 13947 QEplus033719.raw F4 647.5 562.7 687.2 548.8 745.1 681.9 314 2.33 1 FALSE 0.00079 0.01092 0.39 -250 58308 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GESVCLDR [K].gESVcLDR.[C] N-Term(TMT6plex); C5(Carbamidomethyl) 1 P62073 Mitochondrial import inner membrane translocase subunit Tim10 OS=Mus musculus OX=10090 GN=Timm10 PE=1 SV=1 P62073 Mitochondrial import inner membrane translocase subunit Tim10 OS=Mus musculus OX=10090 GN=Timm10 PE=1 SV=1 0 2 2 0.4883 0 1 1 1 582.7984 1164.58953 1164.58804 1.28 0.00074 0/0 0 0 8843612 HCD 30 MS2 53.94213 1036.6 110 51.2358 13955 13955 13947 QEplus033719.raw F4 1427.8 661.4 1026.6 1222.5 784.7 1096.6 163 2.56 1 FALSE 5.44E-05 0.002447 0.579 -250 58318 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQDAVQQHQQK [R].vQDAVQQHQQk.[M] N-Term(TMT6plex); K11(TMT6plex) 2 Q925I1 ATPase family AAA domain-containing protein 3 OS=Mus musculus OX=10090 GN=Atad3 PE=1 SV=1 Q925I1-2; Q925I1 Isoform 2 of ATPase family AAA domain-containing protein 3 OS=Mus musculus OX=10090 GN=Atad3; ATPase family AAA domain-containing protein 3 OS=Mus musculus OX=10090 GN=Atad3 PE=1 SV=1 0 3 3 0.6964 0 1 1 1 589.66882 1766.99192 1766.99135 0.32 0.00019 0/0 0 0 8912349 HCD 30 MS2 46.71299 518.7 110 51.2408 13957 13957 13947 QEplus033719.raw F4 523.8 412.4 598 483.3 494.1 600.7 417 5.6 1 FALSE 1.14E-05 3.55E-12 2.272 -250 58323 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YANNSNYK [R].yANNSNYk.[N] N-Term(TMT6plex); K8(TMT6plex) 3 Q9CQL1 Protein mago nashi homolog 2 OS=Mus musculus OX=10090 GN=Magohb PE=2 SV=1 Q9CQL1; P61327; A0A023T778 Protein mago nashi homolog 2 OS=Mus musculus OX=10090 GN=Magohb PE=2 SV=1; Protein mago nashi homolog OS=Mus musculus OX=10090 GN=Magoh PE=2 SV=1; Mago nashi protein OS=Mus musculus OX=10090 GN=Magohb PE=1 SV=1 0 2 2 0.6375 0 1 1 1 716.38568 1431.76409 1431.76325 0.58 0.00042 0/0 0 0 6708282.5 HCD 30 MS2 12.22944 574.1 110 51.2481 13959 13959 13958 QEplus033719.raw F4 552.9 586.3 626.1 454.8 708.7 515.7 279 3.31 1 FALSE 1.14E-05 0.0001153 0.845 -250 58327 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGLETDNK [K].qGLETDNk.[E] N-Term(TMT6plex); K8(TMT6plex) 6 Q5SV64 Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1 Q80T68; Q5SV64; Q3UH59; Q6PB65; Q4KMN4; Q61879 MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 0 2 2 0.5269 0 1 1 1 681.88672 1362.76616 1362.76292 2.38 0.00162 0/0 0 0 7276742 HCD 30 MS2 11.2504 556.6 110 51.2506 13960 13960 13958 QEplus033719.raw F4 566.5 494.9 531.7 325.1 1003.6 417.8 446 2.79 1 FALSE 1.14E-05 0.0002014 0.799 -250 58332 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSLDQDPVVR [K].rSLDQDPVVR.[T] N-Term(TMT6plex) 4 Q61699 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2 E9Q0U7; Q61699; Q8C6H1; Q61699-2 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=1; Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsph1 PE=2 SV=1; Isoform HSP105-beta of Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 1 3 3 0.5612 0 1 1 1 471.93924 1413.80317 1413.80114 1.43 0.00067 0/0 0 0 33887692 HCD 30 MS2 30.24156 537.5 50.218 51.2529 13961 13961 13958 QEplus033719.raw F4 537.4 421.8 632.5 470.8 534.3 628.1 384 5.31 1 FALSE 1.14E-05 1.22E-10 1.98 -250 58340 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LHTESGEFSR [R].lHTESGEFSR.[Q] N-Term(TMT6plex) 1 Q5SX39 Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1 Q5SX39 Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1 0 3 3 0.7129 0 1 1 1 464.5759 1391.71314 1391.71166 1.06 0.00049 0/0 0 0 33866060 HCD 30 MS2 34.32477 338.4 24.257 51.2552 13962 13962 13958 QEplus033719.raw F4 435.6 213.7 280.1 448.3 318.4 334.3 227 4.25 1 FALSE 1.14E-05 0.0003874 0.744 -250 58348 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYLSQPR [R].nYLSQPR.[L] N-Term(TMT6plex) 2 P62814 "V-type proton ATPase subunit B, brain isoform OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=1 SV=1" P62814; A0A1S6GWG6 "V-type proton ATPase subunit B, brain isoform OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=1 SV=1; Vacuolar proton pump subunit B OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=2 SV=1" 0 2 2 0.3319 0 1 1 1 553.81335 1106.61943 1106.61557 3.49 0.00193 0/0 0 0 22542730 HCD 30 MS2 36.3169 675.5 34.157 51.2574 13963 13963 13958 QEplus033719.raw F4 709.8 566.8 779.7 598.4 649 749.6 233 2.32 1 FALSE 0.001567 0.02386 0.252 -250 58371 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAAEMGK [K].eAAEMGk.[G] N-Term(TMT6plex); K7(TMT6plex) 7 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; P62631; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Mus musculus OX=10090 GN=Eef1a2 PE=1 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 0 2 2 0.4457 0 1 1 1 597.33392 1193.66057 1193.66003 0.45 0.00027 0/0 0 0 12268229 HCD 30 MS2 55.95648 1815.2 110 51.2647 13966 13966 13958 QEplus033719.raw F4 2870.6 1337.6 1979.1 1422.1 1590.5 1691.5 270 2.76 1 FALSE 0.0003803 0.006964 0.459 -250 58379 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVSQPQPAR [R].iVSQPQPAR.[R] N-Term(TMT6plex) 3 Q8CH18 Cell division cycle and apoptosis regulator protein 1 OS=Mus musculus OX=10090 GN=Ccar1 PE=1 SV=1 Q8CH18-2; Q8CH18; Q8CH18-3 Isoform 2 of Cell division cycle and apoptosis regulator protein 1 OS=Mus musculus OX=10090 GN=Ccar1; Cell division cycle and apoptosis regulator protein 1 OS=Mus musculus OX=10090 GN=Ccar1 PE=1 SV=1; Isoform 3 of Cell division cycle and apoptosis regulator protein 1 OS=Mus musculus OX=10090 GN=Ccar1 0 2 2 0.417 0 1 1 1 612.86877 1224.73027 1224.72619 3.34 0.00204 0/0 0 0 8269067 HCD 30 MS2 28.90264 800.8 110 51.2672 13967 13967 13958 QEplus033719.raw F4 822.8 738.7 886.3 636.8 958.5 761.7 218 2.47 1 FALSE 1.14E-05 0.0002158 0.793 -250 58396 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEEERQEGGQSESFK [K].qEEERQEGGQSESFk.[R] N-Term(TMT6plex); K15(TMT6plex) 3 Q569Z5 Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus OX=10090 GN=Ddx46 PE=1 SV=2 Q569Z5; F8WHR6; Q569Z5-2 Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus OX=10090 GN=Ddx46 PE=1 SV=2; RNA helicase OS=Mus musculus OX=10090 GN=Ddx46 PE=1 SV=1; Isoform 2 of Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus OX=10090 GN=Ddx46 1 3 3 0.7964 0 1 1 1 742.70648 2226.10489 2226.10387 0.46 0.00034 0/0 0 0 6322808.5 HCD 30 MS2 0 273.4 110 51.2768 13970 13970 13969 QEplus033719.raw F4 269 287.6 317 193.7 306.9 266.1 234 5.06 1 FALSE 1.14E-05 1.03E-14 2.754 -250 58403 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VCETDGCSSEAK [R].vcETDGcSSEAk.[L] N-Term(TMT6plex); C2(Carbamidomethyl); C7(Carbamidomethyl); K12(TMT6plex) 2 Q8BP48 Methionine aminopeptidase 1 OS=Mus musculus OX=10090 GN=Metap1 PE=1 SV=1 A0A0G2JF71; Q8BP48 Methionine aminopeptidase 1 OS=Mus musculus OX=10090 GN=Metap1 PE=1 SV=1; Methionine aminopeptidase 1 OS=Mus musculus OX=10090 GN=Metap1 PE=1 SV=1 0 2 2 0.8736 0 1 1 1 900.93011 1800.85295 1800.85082 1.18 0.00107 0/0 0 0 4854582.5 HCD 30 MS2 0 276.1 110 51.2794 13971 13971 13969 QEplus033719.raw F4 299.4 218.8 289.4 266.4 279.8 303.1 89 4.59 1 FALSE 1.14E-05 1.09E-08 1.61 -250 58420 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANVTAIR [R].aNVTAIR.[R] N-Term(TMT6plex) 6 Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 Q3UJP4; E9Q133; Q3U0I3; Q3TBM6; Q3U4U6; F6Q609 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; T-complex protein 1 subunit gamma (Fragment) OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=8 0 2 2 0.1359 0 1 1 1 487.30371 973.60015 973.5992 0.98 0.00047 0/0 0 0 68764112 HCD 30 MS2 44.95164 817 15.454 51.2839 13973 13973 13969 QEplus033719.raw F4 741.5 732.5 942.7 688.7 882.6 913.8 109 2.06 1 FALSE 0.0008718 0.01212 0.372 -250 58444 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HYAMQEAK [K].hYAMQEAk.[Q] N-Term(TMT6plex); K8(TMT6plex) 2 Q3TE95 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rcn2 PE=2 SV=1 Q3TE95; Q8BP92 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rcn2 PE=2 SV=1; Reticulocalbin-2 OS=Mus musculus OX=10090 GN=Rcn2 PE=1 SV=1 0 3 3 0.6103 0 1 1 1 479.26422 1435.77811 1435.77679 0.92 0.00044 0/0 0 0 31953546 HCD 30 MS2 30.02757 798.6 48.301 51.2906 13976 13976 13969 QEplus033719.raw F4 745.6 647.1 907.5 776.9 853.6 861 360 3.9 1 FALSE 1.14E-05 4.95E-06 1.105 -250 58449 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMRDELHVR [K].eMRDELHVR.[G] N-Term(TMT6plex) 1 Q8CCJ3 E3 UFM1-protein ligase 1 OS=Mus musculus OX=10090 GN=Ufl1 PE=1 SV=2 Q8CCJ3 E3 UFM1-protein ligase 1 OS=Mus musculus OX=10090 GN=Ufl1 PE=1 SV=2 1 4 4 0.2578 0 1 1 1 354.19272 1413.74904 1413.747 1.45 0.00051 0/0 0 0 6597272.5 HCD 30 MS2 40.55201 406.3 110 51.2931 13977 13977 13969 QEplus033719.raw F4 417.9 305.2 476.8 330.1 386.6 521.3 231 4.15 1 FALSE 1.14E-05 2.79E-05 0.963 -250 58460 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEEEDEDEEDGER [K].lEEEDEDEEDGER.[G] N-Term(TMT6plex) 3 O08529 Calpain-2 catalytic subunit OS=Mus musculus OX=10090 GN=Capn2 PE=1 SV=4 Q8R486; O08529; Q3U8S5 M-calpain 80 kDa large subunit (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Calpain-2 catalytic subunit OS=Mus musculus OX=10090 GN=Capn2 PE=1 SV=4; Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1 0 2 2 0.9381 0 1 1 1 911.88873 1822.77019 1822.76639 2.08 0.0019 0/0 0 0 3033483.5 HCD 30 MS2 0 175.7 110 51.2982 13979 13979 13969 QEplus033719.raw F4 167.3 167 197 153.4 188.3 181.3 3 4.85 1 FALSE 1.14E-05 6.78E-13 2.409 -250 58476 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSFYCQAR [K].gSFYcQAR.[Q] N-Term(TMT6plex); C5(Carbamidomethyl) 3 P37889 Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 P37889-2; Q99K58; P37889 Isoform 2 of Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2; Fibulin 2 OS=Mus musculus OX=10090 GN=Fbln2 PE=2 SV=1; Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 0 2 2 0.4957 0 1 1 1 609.30133 1217.59538 1217.59346 1.58 0.00096 0/0 0 0 26589998 HCD 30 MS2 51.59006 711.1 31.845 51.3102 13983 13983 13980 QEplus033719.raw F4 688 729.7 817.8 637.6 763.3 630 42 2.34 1 FALSE 0.001185 0.01611 0.32 -250 58482 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNTTIPTK [K].rNTTIPTk.[Q] N-Term(TMT6plex); K8(TMT6plex) 18 Q3TEK2; B7U582 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1;Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; B7U582; Q3TH04; P63017; Q3TQ13; Q3TB63; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16; P17156 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Mus musculus OX=10090 GN=Hspa2 PE=1 SV=2 1 3 3 0.4552 0 1 1 1 463.6261 1388.86374 1388.86257 0.84 0.00039 0/0 0 0 23188068 HCD 30 MS2 20.41687 695.7 46.882 51.3125 13984 13984 13980 QEplus033719.raw F4 826.3 538.2 701.3 567.3 792.1 749.3 420 4.02 2 FALSE 1.14E-05 7.51E-06 1.071 -250 58497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGGSPIK [KE].dGGSPIk.[GA] N-Term(TMT6plex); K7(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; Q8BUX4; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.0591 0 1 1 1 566.34082 1131.67436 1131.67739 -2.68 -0.00152 0/0 0 0 6939547 HCD 30 MS2 46.96844 1081.1 110 51.3172 13986 13986 13980 QEplus033719.raw F4 1308.7 589 1024.8 1438 734.6 1391.5 308 2.03 2 FALSE 0.007759 0.1272 -0.055 -250 58507 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APAGQLPR [K].aPAGQLPR.[S] N-Term(TMT6plex) 3 Q3UI57 DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=1 SV=1 Q3UI57; Q3ULD6; Q3UZH2 DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=2 SV=1 0 2 2 0.5311 0 1 1 1 519.81927 1038.63127 1038.62574 5.32 0.00276 0/0 0 0 4620962.5 HCD 30 MS2 48.46504 767.1 110 51.3197 13987 13987 13980 QEplus033719.raw F4 863.2 666.5 781.8 591.7 910.7 788.4 133 2.09 1 FALSE 0.001929 0.0331 0.202 -250 58511 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGPGQPGFEGEQGTR [R].gGPGQPGFEGEQGTR.[G] N-Term(TMT6plex) 5 E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" A0A087WS16; Q05504; J3QQ16; O88493; E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen alpha 3 chain type VI (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Type VI collagen alpha 3 subunit OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" 0 2 2 0.7418 0 1 1 1 851.92358 1702.83989 1702.83463 3.09 0.00263 0/0 0 0 2529936.75 HCD 30 MS2 0 170.4 110 51.3223 13988 13988 13980 QEplus033719.raw F4 179.3 177.8 157.9 121.9 232.8 152.9 143 4.57 1 FALSE 1.14E-05 6.31E-16 3.116 -250 58517 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MLQHAASNK [K].mLQHAASNk.[M] N-Term(TMT6plex); K9(TMT6plex) 6 Q9JKF1 Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2 Q9JKF1; Q8BPA6; Q80UW7; Q6ZQK2; Q8CDT3; Q3TU98 Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2; Ras-GAP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; IQ motif containing GTPase activating protein 1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; MKIAA0051 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Ras-GAP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Ras-GAP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1 0 2 2 0.6226 0 1 1 1 729.41913 1457.83098 1457.82989 0.75 0.00055 0/0 0 0 2903688.75 HCD 30 MS2 0 208.8 110 51.3248 13989 13989 13980 QEplus033719.raw F4 212.2 175 212.3 194.7 316.5 141.8 331 3.71 1 FALSE 1.14E-05 4.19E-07 1.309 -250 58534 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NKPYPVR [R].nkPYPVR.[A] N-Term(TMT6plex); K2(TMT6plex) 3 Q9D0F3 Protein ERGIC-53 OS=Mus musculus OX=10090 GN=Lman1 PE=1 SV=1 D3Z5B9; Q9D0F3; Q3U944 Protein ERGIC-53 (Fragment) OS=Mus musculus OX=10090 GN=Lman1 PE=1 SV=1; Protein ERGIC-53 OS=Mus musculus OX=10090 GN=Lman1 PE=1 SV=1; L-type lectin-like domain-containing protein OS=Mus musculus OX=10090 GN=Lman1 PE=2 SV=1 0 3 3 0.3972 0 1 1 1 444.61191 1331.82117 1331.81998 0.9 0.0004 0/0 0 0 56704968 HCD 30 MS2 17.97177 702.9 22.24 51.3346 13992 13992 13991 QEplus033719.raw F4 653.2 587 809.4 594.9 784.3 788.6 370 2.14 1 FALSE 0.00638 0.1031 -0.002 -250 58542 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VCETDGCSSEAK [R].vcETDGcSSEAk.[L] N-Term(TMT6plex); C2(Carbamidomethyl); C7(Carbamidomethyl); K12(TMT6plex) 2 Q8BP48 Methionine aminopeptidase 1 OS=Mus musculus OX=10090 GN=Metap1 PE=1 SV=1 A0A0G2JF71; Q8BP48 Methionine aminopeptidase 1 OS=Mus musculus OX=10090 GN=Metap1 PE=1 SV=1; Methionine aminopeptidase 1 OS=Mus musculus OX=10090 GN=Metap1 PE=1 SV=1 0 3 3 0.7914 0 1 1 1 600.95691 1800.85617 1800.85082 2.97 0.00178 0/0 0 0 9292446 HCD 30 MS2 28.71334 617.6 110 51.3371 13993 13993 13991 QEplus033719.raw F4 633.1 507.6 652.4 558.4 686 668.2 85 4.41 1 FALSE 1.14E-05 2.23E-07 1.361 -250 58551 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILPEAHQR [R].iLPEAHQR.[T] N-Term(TMT6plex) 5 Q7TPT7 Valyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1 Q3U3D3; G3UY93; Q3TII4; Q7TPT7; Q9Z1Q9 Valyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1; Valyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Vars PE=1 SV=1; Valyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1; Valyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1; Valine--tRNA ligase OS=Mus musculus OX=10090 GN=Vars1 PE=1 SV=1 0 3 3 0.5162 0 1 1 1 398.23862 1192.7013 1192.69997 1.11 0.00044 0/0 0 0 47512352 HCD 30 MS2 39.79007 404.4 23.578 51.3393 13994 13994 13991 QEplus033719.raw F4 595.6 274.6 377.9 319.5 480.6 378 351 3.7 1 FALSE 1.14E-05 2.79E-05 0.963 -250 58571 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YEKPGSPPR [K].yEkPGSPPR.[E] N-Term(TMT6plex); K3(TMT6plex) 14 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WS99; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.4865 0 1 1 1 744.93341 1488.85954 1488.85748 1.38 0.00103 0/0 0 0 3807788 HCD 30 MS2 0 300.1 110 51.3469 13997 13997 13991 QEplus033719.raw F4 303.5 248.1 333.2 422.9 201.9 290.9 405 2.59 3 FALSE 0.0002518 0.005069 0.5 -250 58581 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECVQPATK [K].ecVQPATk.[S] N-Term(TMT6plex); C2(Carbamidomethyl); K8(TMT6plex) 2 O55143 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2 O55143; Q5DTI2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1 0 2 2 0.5531 0 1 1 1 695.89276 1390.77825 1390.77646 1.29 0.00089 0/0 0 0 16882638 HCD 30 MS2 14.81355 804.2 110 51.3516 13999 13999 13991 QEplus033719.raw F4 805.4 684.3 838.6 712.1 983.8 801 393 3.2 1 FALSE 1.14E-05 8.07E-05 0.875 -250 58611 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YEKPGSPPR [K].yEkPGSPPR.[E] N-Term(TMT6plex); K3(TMT6plex) 14 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WS99; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.2295 0 1 1 1 496.95776 1488.85874 1488.85748 0.84 0.00042 0/0 0 0 128488128 HCD 30 MS2 41.33464 1073.8 11.305 51.3683 14005 14005 14002 QEplus033719.raw F4 1110.4 882.7 1191.2 1367.9 814.7 1075.9 410 1.83 3 FALSE 0.008678 0.1536 -0.091 -250 58618 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGNGLIK [K].rGNGLIk.[V] N-Term(TMT6plex); K7(TMT6plex) 3 Q641N3 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 Q641N3; P14131; Q5CZY9 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1; 40S ribosomal protein S16 OS=Mus musculus OX=10090 GN=Rps16 PE=1 SV=4; Rps16 protein OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 1 3 3 0.3593 0 1 1 1 405.93622 1215.7941 1215.79376 0.28 0.00011 0/0 0 0 44316616 HCD 30 MS2 23.97603 786.6 24.333 51.3705 14006 14006 14002 QEplus033719.raw F4 1020.5 516.8 749.2 714.8 851.7 866.5 297 2.7 1 FALSE 0.0002518 0.005178 0.497 -250 58624 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERTIEEAACSR [R].eRTIEEAAcSR.[R] N-Term(TMT6plex); C9(Carbamidomethyl) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 1 3 3 0.7275 0 1 1 1 517.59845 1550.7808 1550.77942 0.89 0.00046 0/0 0 0 20860754 HCD 30 MS2 15.97633 701.6 63.696 51.3728 14007 14007 14002 QEplus033719.raw F4 857.3 432.4 792.6 725.1 541.1 861.3 171 4.88 1 FALSE 1.14E-05 2.35E-08 1.547 -250 58629 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNTPLVER [K].dNTPLVER.[F] N-Term(TMT6plex) 3 Q8BMA6 Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=2 Q8BMA6; A2AAN2; Q8K258 Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=2; Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=1; Srp68 protein OS=Mus musculus OX=10090 GN=Srp68 PE=2 SV=1 0 2 2 0.494 0 1 1 1 586.82965 1172.65203 1172.64727 4.06 0.00238 0/0 0 0 11909186 HCD 30 MS2 29.14691 829.5 110 51.3753 14008 14008 14002 QEplus033719.raw F4 842.9 708.6 903 639.7 945.9 936.6 306 2.51 1 FALSE 3.35E-05 0.001394 0.632 -250 58634 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VFAVHQGR [K].vFAVHQGR.[E] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.6298 0 1 1 1 571.83618 1142.66509 1142.66319 1.66 0.00095 0/0 0 0 7403410.5 HCD 30 MS2 17.47312 779.3 110 51.3778 14009 14009 14002 QEplus033719.raw F4 834 593.7 845.2 912.9 580.6 909.4 224 2.62 3 FALSE 2.26E-05 0.001083 0.655 -250 58649 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGPGQPGFEGEQGTR [R].gGPGQPGFEGEQGTR.[G] N-Term(TMT6plex) 5 E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" A0A087WS16; Q05504; J3QQ16; O88493; E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen alpha 3 chain type VI (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Type VI collagen alpha 3 subunit OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" 0 3 3 0.7547 0 1 1 1 568.28247 1702.83286 1702.83463 -1.04 -0.00059 0/0 0 0 5789093.5 HCD 30 MS2 42.12589 633.2 110 51.3828 14011 14011 14002 QEplus033719.raw F4 776.6 471.5 641.7 439.7 757 712.9 125 3.75 1 FALSE 1.14E-05 9.58E-05 0.861 -250 58661 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQASAPAQAPK [K].aQASAPAQAPk.[G] N-Term(TMT6plex); K11(TMT6plex) 1 P47915 60S ribosomal protein L29 OS=Mus musculus OX=10090 GN=Rpl29 PE=1 SV=2 P47915 60S ribosomal protein L29 OS=Mus musculus OX=10090 GN=Rpl29 PE=1 SV=2 0 3 3 0.3379 0 1 1 1 499.96097 1497.86835 1497.87895 -7.07 -0.00353 0/0 0 0 7382987 HCD 30 MS2 27.62067 819.6 110 51.3948 14015 14015 14013 QEplus033719.raw F4 976.2 468 762.2 1091.8 630.9 988.6 349 2.93 1 FALSE 0.001591 0.02451 0.247 -250 58674 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRPTATCK [K].lRPTATck.[M] N-Term(TMT6plex); C7(Carbamidomethyl); K8(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A2AT70; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.5889 0 1 1 1 468.95349 1404.84592 1404.83973 4.41 0.00206 0/0 0 0 12348875 HCD 30 MS2 33.45881 923.8 59.333 51.3993 14017 14017 14013 QEplus033719.raw F4 1031.8 387.4 843.1 1277.3 538.6 1464.5 398 2.87 2 FALSE 0.007208 0.1139 -0.029 -250 58683 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYGPAK [K].dYGPAk.[G] N-Term(TMT6plex); K6(TMT6plex) 2 Q544R9 High mobility group box 3 OS=Mus musculus OX=10090 GN=Hmgb3 PE=1 SV=1 A2AP78; Q544R9 High mobility group protein B3 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb3 PE=1 SV=1; High mobility group box 3 OS=Mus musculus OX=10090 GN=Hmgb3 PE=1 SV=1 0 2 2 0.36 0 1 1 1 554.82501 1108.64275 1108.64028 2.23 0.00123 0/0 0 0 14106962 HCD 30 MS2 42.14449 1431.7 95.343 51.4016 14018 14018 14013 QEplus033719.raw F4 1475.2 1552.9 1341.6 843.1 2225.5 1151.8 187 1.75 1 FALSE 0.005644 0.095 0.02 -250 58722 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERTIEEAACSR [R].eRTIEEAAcSR.[R] N-Term(TMT6plex); C9(Carbamidomethyl) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 1 2 2 0.6764 0 1 1 1 775.89325 1550.77922 1550.77942 -0.13 -0.0001 0/0 0 0 4116483.25 HCD 30 MS2 0 116.7 110 51.4139 14023 14023 14013 QEplus033719.raw F4 123.5 109.2 133.8 125.7 88.7 119.6 167 3.43 1 FALSE 1.14E-05 0.0001658 0.815 -250 58732 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQYEEEQEGK [R].eQYEEEQEGk.[A] N-Term(TMT6plex); K10(TMT6plex) 4 P13541; P13542 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; P13541; B1AR69; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.7358 0 1 1 1 863.9306 1726.85393 1726.85358 0.2 0.00017 0/0 0 0 4987902.5 HCD 30 MS2 0 358.3 110 51.4237 14026 14026 14024 QEplus033719.raw F4 480.6 31.3 215 811.7 25.5 585.9 167 4.24 2 FALSE 1.14E-05 1.63E-07 1.387 -250 58734 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YVEVGR [R].yVEVGR.[V] N-Term(TMT6plex) 4 Q9CR57; Q569Z0 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14 PE=1 SV=3;60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14-ps1 PE=2 SV=1 Q9CR57; Q569Z0; A0A1L1SUF6; Q9CWK0 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14 PE=1 SV=3; 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14-ps1 PE=2 SV=1; 60S ribosomal protein L14 (Fragment) OS=Mus musculus OX=10090 GN=Rpl14 PE=1 SV=1; 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14 PE=2 SV=1 0 2 2 0.4336 0 1 1 1 476.27725 951.54723 951.5461 1.19 0.00057 0/0 0 0 124480336 HCD 30 MS2 10.37676 851 10.849 51.426 14027 14027 14024 QEplus033719.raw F4 818.2 782.7 1013.6 673.4 879.4 938.7 119 2.26 2 FALSE 0.006275 0.1019 0.001 -250 58763 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTSELEAASSVR [K].rTSELEAASSVR.[E] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 1 3 3 0.7439 0 1 1 1 512.28528 1534.84128 1534.83865 1.71 0.00088 0/0 0 0 13046378 HCD 30 MS2 44.35188 806.4 110 51.4355 14031 14031 14024 QEplus033719.raw F4 893.3 504.4 793.3 822 742.5 1083.1 395 5.74 2 FALSE 1.14E-05 3.21E-12 2.281 -250 58768 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVCDENGSK [K].vVcDENGSk.[G] N-Term(TMT6plex); C3(Carbamidomethyl); K9(TMT6plex) 13 P29341; Q99LF8 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2;Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1 P29341; Q3U8U8; Q99LF8; Q9D4E6; Q91YZ8; A3KFU5; Q3UX16; Q8BN32; A3KFU8; Q6PHQ9; Q99KL3; V9GXG3; Q9DBE3 "Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc6 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Poly(A)-binding protein, cytoplasmic 4 OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1" 0 2 2 0.6706 0 1 1 1 733.3913 1465.77532 1465.7721 2.19 0.00161 0/0 0 0 12108156 HCD 30 MS2 18.91051 546.8 110 51.4381 14032 14032 14024 QEplus033719.raw F4 708.6 437.3 599.3 435.7 588 511.7 291 3.4 2 FALSE 1.14E-05 4.96E-06 1.105 -250 58776 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VFAVHQGR [K].vFAVHQGR.[E] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.6953 0 1 1 1 381.5593 1142.66333 1142.66319 0.12 0.00005 0/0 0 0 329509920 HCD 30 MS2 2.34835 279.6 3.503 51.4403 14033 14033 14024 QEplus033719.raw F4 247.3 183.5 331.1 390.7 165.3 359.6 227 3.61 3 FALSE 1.14E-05 0.0006615 0.698 -250 58795 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQPEVDMSDR [K].nQPEVDMSDR.[G] N-Term(TMT6plex) 7 Q01730 Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=3 Q01730; A2AUR7; Q3TFN7; Q9D031; E0CXG5; A0A0A6YWZ2; B1AYQ0 Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=3; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsu1 PE=2 SV=1; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1; Ras suppressor protein 1 OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1; Ras suppressor protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Rsu1 PE=1 SV=1 0 2 2 0.6943 0 1 1 1 710.34058 1419.67388 1419.67356 0.22 0.00016 0/0 0 0 7219885.5 HCD 30 MS2 35.12077 415.9 110 51.4499 14036 14036 14035 QEplus033719.raw F4 423.9 374.3 443 335.5 509 409.6 60 3.5 1 FALSE 1.14E-05 1.16E-07 1.415 -250 58800 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQYEEEQEGK [R].eQYEEEQEGk.[A] N-Term(TMT6plex); K10(TMT6plex) 4 P13541; P13542 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; P13541; B1AR69; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 3 3 1 0 1 1 1 576.29034 1726.85648 1726.85358 1.68 0.00097 0/0 0 0 19105838 HCD 30 MS2 18.81481 719.4 92.362 51.4521 14037 14037 14035 QEplus033719.raw F4 859.2 295.4 551.3 1259.3 342.5 1008.5 159 4.01 2 FALSE 1.14E-05 3.23E-05 0.951 -250 58801 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVEHINK [K].aVEHINk.[T] N-Term(TMT6plex); K7(TMT6plex) 4 P21550 Beta-enolase OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=3 Q4FK59; Q5SX59; P21550; Q5SX60 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno3 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=1; Beta-enolase OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=3; Beta-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=1 0 3 3 0.1967 0 1 1 1 423.59607 1268.77365 1268.77269 0.76 0.00032 0/0 0 0 134968384 HCD 30 MS2 13.59335 464.9 8.108 51.4544 14038 14038 14035 QEplus033719.raw F4 672.5 188.4 423 727.5 289.4 488.4 266 3.66 1 FALSE 5.44E-05 0.002253 0.587 -250 58808 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIEMER [R].aIEMER.[G] N-Term(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; Q9D0E1-2; Q3TQ66; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 2 2 0.0585 0 1 1 1 489.26846 977.52965 977.52873 0.94 0.00046 0/0 0 0 57589356 HCD 30 MS2 24.45699 802.5 22.07 51.4567 14039 14039 14035 QEplus033719.raw F4 878.5 779.1 901.3 596.5 857.6 802.2 184 2.05 1 FALSE 0.004181 0.07668 0.07 -250 58817 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADINTK [K].aDINTk.[W] N-Term(TMT6plex); K6(TMT6plex) 4 Q9CR57; Q569Z0 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14 PE=1 SV=3;60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14-ps1 PE=2 SV=1 Q922F9; Q9CR57; Q569Z0; Q9CWK0 60S ribosomal protein L14 (Fragment) OS=Mus musculus OX=10090 GN=Rpl14-ps1 PE=2 SV=1; 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14 PE=1 SV=3; 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14-ps1 PE=2 SV=1; 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14 PE=2 SV=1 0 2 2 0.3037 0 1 1 1 560.34009 1119.6729 1119.67739 -4.02 -0.00225 0/0 0 0 30338350 HCD 30 MS2 16.61009 764.4 28.558 51.4589 14040 14040 14035 QEplus033719.raw F4 936.3 516.2 950.9 738.2 477.4 967.1 308 2.14 2 FALSE 0.005725 0.09586 0.018 -250 58838 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNTTIPTK [K].rNTTIPTk.[Q] N-Term(TMT6plex); K8(TMT6plex) 18 Q3TEK2; B7U582 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1;Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; B7U582; Q3TH04; P63017; Q3TQ13; Q3TB63; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16; P17156 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Mus musculus OX=10090 GN=Hspa2 PE=1 SV=2 1 2 2 0.415 0 1 1 1 694.93604 1388.86479 1388.86257 1.6 0.00111 0/0 0 0 23976548 HCD 30 MS2 15.23462 663 82.538 51.4657 14043 14043 14035 QEplus033719.raw F4 742.9 512.5 653.5 564.5 743 761.8 440 2.53 2 FALSE 0.00219 0.04206 0.167 -250 58845 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APTVKPGETR [K].aPTVkPGETR.[V] N-Term(TMT6plex); K5(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.5763 0 1 1 1 505.30817 1513.90995 1513.91025 -0.2 -0.0001 0/0 0 0 22207504 HCD 30 MS2 47.57332 1240.6 64.258 51.4679 14044 14044 14035 QEplus033719.raw F4 1483.4 484.2 1124.5 1834.8 561.4 1955 283 2.36 2 FALSE 0.003075 0.05984 0.114 -250 58866 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAVEQQIQSHR [K].qAVEQQIQSHR.[E] N-Term(TMT6plex) 1 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 0 3 3 0.7231 0 1 1 1 518.28522 1552.8411 1552.83932 1.15 0.00059 0/0 0 0 31077872 HCD 30 MS2 31.0363 353.2 46.982 51.4824 14049 14049 14046 QEplus033719.raw F4 438.9 208.3 402.7 381.6 252.3 435.3 336 5.67 1 FALSE 1.14E-05 1.90E-10 1.944 -250 58873 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDNSIR [R].lDNSIR.[N] N-Term(TMT6plex) 6 Q9JKF1 Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2 Q9JKF1; Q8BPA6; Q80UW7; Q6ZQK2; Q8CDT3; Q3TU98 Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2; Ras-GAP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; IQ motif containing GTPase activating protein 1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; MKIAA0051 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Ras-GAP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Ras-GAP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1 0 2 2 0.1733 0 1 1 1 473.77994 946.5526 946.55191 0.73 0.00034 0/0 0 0 30955272 HCD 30 MS2 62.09516 678.4 20.486 51.4847 14050 14050 14046 QEplus033719.raw F4 751.8 607 724.6 548 727.1 711.7 163 2.25 1 FALSE 0.003182 0.06218 0.108 -250 58889 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVEHINK [K].aVEHINk.[T] N-Term(TMT6plex); K7(TMT6plex) 4 P21550 Beta-enolase OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=3 Q4FK59; Q5SX59; P21550; Q5SX60 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno3 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=1; Beta-enolase OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=3; Beta-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=1 0 2 2 0.3659 0 1 1 1 634.89032 1268.77336 1268.77269 0.53 0.00034 0/0 0 0 12408314 HCD 30 MS2 32.09985 1076.1 110 51.4917 14053 14053 14046 QEplus033719.raw F4 1457.4 540.8 1045.9 1641.8 674.6 1096 261 3.17 1 FALSE 0.0002119 0.004248 0.52 -250 58897 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FQVENSNR [K].fQVENSNR.[L] N-Term(TMT6plex) 3 ENSEMBL:ENSBTAP00000024146 (Bos taurus) similar to alpha-2-macroglobulin isoform 1 P28665; ENSEMBL:ENSBTAP00000024146; A0A0N4SVU1 Murinoglobulin-1 OS=Mus musculus OX=10090 GN=Mug1 PE=1 SV=3; (Bos taurus) similar to alpha-2-macroglobulin isoform 1; Predicted gene 7298 OS=Mus musculus OX=10090 GN=Gm7298 PE=3 SV=1 0 2 2 0.6353 0 1 1 1 611.82324 1222.63921 1222.63777 1.18 0.00072 0/0 0 0 12069879 HCD 30 MS2 36.66858 852.5 110 51.4942 14054 14054 14046 QEplus033719.raw F4 847.7 538.3 736.8 685.7 1656 650.5 232 2.66 1 TRUE 4.43E-05 0.001482 0.627 -250 58926 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGFAGDDAPR [K].aGFAGDDAPR.[A] N-Term(TMT6plex) 36 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q3UAF6; Q3UD81; Q3U122; E9Q1F2; Q3UAA9; F6WX90; A0A1D5RM20; B2RRX1; A0A494B9T3; Q3U5R4; A1E281; Q3UAF7; G3UZ07; P62737; G3UYG0; P68134; Q3UBP6; D3YZY0; E9Q5F4; B1ATY1; P68033; P63260; Q61852; Q3UA89; Q3UGS0; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=4 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 2 2 0.7175 0 1 1 1 603.30969 1205.61211 1205.61122 0.74 0.00045 0/0 0 0 103986584 HCD 30 MS2 4.372682 655.4 14.489 51.5065 14058 14058 14057 QEplus033719.raw F4 664.2 589.4 743.4 521.8 713.8 699.8 142 3.15 4 FALSE 1.14E-05 1.48E-06 1.205 -250 58933 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVSSSLSDAR [R].sVSSSLSDAR.[D] N-Term(TMT6plex) 4 Q3UDH4 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sec24b PE=2 SV=1 F6VJC5; Q3UDH4; Q3U882; Q80ZX0 "Sec24-related gene family, member B (S. cerevisiae) (Fragment) OS=Mus musculus OX=10090 GN=Sec24b PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sec24b PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sec24b PE=2 SV=1; Sec24-related gene family, member B (S. cerevisiae) OS=Mus musculus OX=10090 GN=Sec24b PE=1 SV=1" 0 2 2 0.6459 0 1 1 1 619.3316 1237.65593 1237.65856 -2.12 -0.00131 0/0 0 0 5356407 HCD 30 MS2 36.54428 486 110 51.509 14059 14059 14057 QEplus033719.raw F4 669.5 396.6 460.6 395.1 584.1 410.2 237 3.05 1 FALSE 1.14E-05 4.51E-06 1.113 -250 58942 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYSSSFDR [K].eYSSSFDR.[V] N-Term(TMT6plex) 5 Q791V5 Mitochondrial carrier homolog 2 OS=Mus musculus OX=10090 GN=Mtch2 PE=1 SV=1 Q791V5; Q3UA17; A2AFW6; Q05C68; Q9D050 Mitochondrial carrier homolog 2 OS=Mus musculus OX=10090 GN=Mtch2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mtch2 PE=2 SV=1; Mitochondrial carrier homolog 2 OS=Mus musculus OX=10090 GN=Mtch2 PE=1 SV=1; Mtch2 protein (Fragment) OS=Mus musculus OX=10090 GN=Mtch2 PE=2 SV=1; Mitochondrial carrier homolog 2 OS=Mus musculus OX=10090 GN=Mtch2 PE=1 SV=1 0 2 2 0.6623 0 1 1 1 610.29333 1219.57939 1219.57925 0.12 0.00007 0/0 0 0 27407668 HCD 30 MS2 50.71399 1059.9 49.623 51.5113 14060 14060 14057 QEplus033719.raw F4 1081.5 880.5 1252.6 1145.1 939.8 1060 34 3.02 1 FALSE 2.26E-05 0.001111 0.653 -250 58953 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQELVTK [K].rQELVTk.[I] N-Term(TMT6plex); K7(TMT6plex) 5 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q99LY0; Q91YQ5; Q5RKP4; Q3U900; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 1 3 3 0.5308 0 1 1 1 444.62076 1331.84772 1331.84111 4.97 0.00221 0/0 0 0 10225866 HCD 30 MS2 30.91468 762.9 50.579 51.5158 14062 14062 14057 QEplus033719.raw F4 752.8 613.3 780.5 636.3 973.5 820.9 290 3.41 1 FALSE 1.14E-05 0.0003929 0.743 -250 58967 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAYQCIK [K].rAYQcIk.[WC] N-Term(TMT6plex); C5(Carbamidomethyl); K7(TMT6plex) 7 Q4FE56 Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Usp9x PE=1 SV=1 Q91XW2; Q4FE56; G3UZS3; Q8BR77; P70398; Q8BS89; F8VPU6 Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Usp9y PE=2 SV=1; Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Usp9x PE=1 SV=1; Probable ubiquitin carboxyl-terminal hydrolase FAF-X (Fragment) OS=Mus musculus OX=10090 GN=Usp9x PE=1 SV=1; DUF3517 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Usp9x PE=2 SV=1; Probable ubiquitin carboxyl-terminal hydrolase FAF-X OS=Mus musculus OX=10090 GN=Usp9x PE=1 SV=2; USP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Usp9x PE=2 SV=1; Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Usp9y PE=1 SV=1 1 3 3 0.4167 0 1 1 1 466.27502 1396.81052 1396.81351 -2.14 -0.001 0/0 0 0 7687314.5 HCD 30 MS2 23.5541 1089.2 110 51.5208 14064 14064 14057 QEplus033719.raw F4 1342.1 748.1 1113.1 1007.1 1006 1318.7 331 2.52 1 FALSE 0.001506 0.0223 0.263 -250 58976 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LREDLER [K].lREDLER.[L] N-Term(TMT6plex) 4 Q561N5 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1 Q561N5; Q3TW65; F6YVP7; A0A1Y7VKY1 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps6 PE=3 SV=2; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps5 PE=3 SV=1 1 2 2 0.1701 0 1 1 1 580.33472 1159.66216 1159.66325 -0.94 -0.00055 0/0 0 0 7084872.5 HCD 30 MS2 32.22143 596.3 110 51.5233 14065 14065 14057 QEplus033719.raw F4 768.1 431.5 594.7 552.7 646 584.5 326 2.41 1 FALSE 0.0006869 0.01006 0.403 -250 59003 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EKEEVIR [K].ekEEVIR.[E] N-Term(TMT6plex); K2(TMT6plex) 5 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 1 2 2 0.4569 0 1 1 1 680.91406 1360.82085 1360.82004 0.6 0.00041 0/0 0 0 2880971 HCD 30 MS2 42.10446 311 110 51.5382 14070 14070 14068 QEplus033719.raw F4 347.4 164.1 246.3 418.4 267.8 421.8 553 1.97 2 FALSE 0.001335 0.01845 0.295 -250 59009 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LREDLER [K].lREDLER.[L] N-Term(TMT6plex) 4 Q561N5 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1 Q561N5; Q3TW65; F6YVP7; A0A1Y7VKY1 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps6 PE=3 SV=2; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps5 PE=3 SV=1 1 3 3 0.3226 0 1 1 1 387.22574 1159.66266 1159.66325 -0.51 -0.0002 0/0 0 0 77264864 HCD 30 MS2 20.55372 458.3 13.788 51.5404 14071 14071 14068 QEplus033719.raw F4 467.9 371 492.5 419.7 517.4 481 326 2.79 1 FALSE 0.0008805 0.01226 0.369 -250 59053 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVQGPPGPAGPR [R].gVQGPPGPAGPR.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 2 2 0.7115 0 1 1 1 659.87512 1318.74297 1318.7429 0.05 0.00003 0/0 0 0 19568454 HCD 30 MS2 0 717.5 110 51.5552 14077 14077 14068 QEplus033719.raw F4 689.4 687.9 872.4 448.8 874.9 731.4 396 3.64 1 FALSE 1.14E-05 1.92E-08 1.563 -250 59070 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEQMAESK [K].eEQMAESk.[L] N-Term(TMT6plex); K8(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.5147 0 1 1 1 705.37207 1409.73686 1409.73465 1.57 0.00111 0/0 0 0 8889633 HCD 30 MS2 16.70365 521.3 110 51.565 14080 14080 14079 QEplus033719.raw F4 732.9 188.3 501.4 604.1 433.3 667.7 247 2.72 1 FALSE 1.14E-05 0.0001681 0.814 -250 59074 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAEEEDEADPK [R].tAEEEDEADPk.[R] N-Term(TMT6plex); K11(TMT6plex) 2 Q66JR8 Ptms protein OS=Mus musculus OX=10090 GN=Ptms PE=2 SV=1 Q66JR8; Q9D0J8 Ptms protein OS=Mus musculus OX=10090 GN=Ptms PE=2 SV=1; Parathymosin OS=Mus musculus OX=10090 GN=Ptms PE=1 SV=3 0 2 2 0.6928 0 1 1 1 846.42328 1691.83928 1691.8376 1 0.00084 0/0 0 0 15379663 HCD 30 MS2 7.451829 575.1 110 51.5676 14081 14081 14079 QEplus033719.raw F4 586.1 522.5 649.6 350 806.4 536.1 160 3.32 1 FALSE 1.14E-05 1.28E-08 1.597 -250 59084 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VFAVHQGR [K].vFAVHQGR.[E] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.7188 0 1 1 1 381.55939 1142.66361 1142.66319 0.36 0.00014 0/0 0 0 679134656 HCD 30 MS2 6.484969 135.5 1.595 51.5698 14082 14082 14079 QEplus033719.raw F4 120.8 97.4 157.6 183.7 81.7 171.8 222 3.52 3 FALSE 1.14E-05 0.000409 0.739 -250 59099 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDSSPDSAEDVRK [K].cDSSPDSAEDVRk.[L] N-Term(TMT6plex); C1(Carbamidomethyl); K13(TMT6plex) 1 P12763 SWISS-PROT:P12763 (Bos taurus) Alpha-2-HS-glycoprotein precursor P12763 SWISS-PROT:P12763 (Bos taurus) Alpha-2-HS-glycoprotein precursor 1 3 3 0.7974 0 1 1 1 641.98785 1923.94901 1923.94823 0.41 0.00026 0/0 0 0 31635152 HCD 30 MS2 25.67385 696 48.577 51.5743 14084 14084 14079 QEplus033719.raw F4 777.4 248.2 332.3 200.9 2395.8 221.4 179 4.54 1 TRUE 1.14E-05 3.38E-10 1.896 -250 59107 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIHELEK [K].hIHELEk.[I] N-Term(TMT6plex); K7(TMT6plex) 4 Q5SX39; P13542 Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q5SX39; P13542; Q9JHR4 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2; Myosin heavy chain IIB (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1" 0 3 3 0.1799 0 1 1 1 455.27536 1363.81153 1363.80981 1.26 0.00057 0/0 0 0 29308264 HCD 30 MS2 36.17341 990.8 50.356 51.5766 14085 14085 14079 QEplus033719.raw F4 1195.4 309.4 665.1 1984.1 359.7 1431.2 447 3.78 2 FALSE 1.14E-05 3.44E-05 0.945 -250 59115 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEEFEEGCK [R].hEEFEEGck.[A] N-Term(TMT6plex); C8(Carbamidomethyl); K9(TMT6plex) 8 Q9CPV4 Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=1 F6ZTG3; E9Q197; Q9CPV4-2; Q9CPV4; E9Q055; Q9CPV4-3; E9Q2R6; F7BB55 Glyoxalase domain-containing protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=1; Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=1; Isoform 2 of Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4; Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=1; Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=1; Isoform 3 of Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4; Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=1; Glyoxalase domain-containing protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=8 0 3 3 0.7494 0 1 1 1 541.60144 1622.78977 1622.78848 0.79 0.00043 0/0 0 0 12455491 HCD 30 MS2 40.56182 981.7 104.885 51.579 14086 14086 14079 QEplus033719.raw F4 1048.3 874 1087.7 853.9 1006.6 1019.4 101 4.11 1 FALSE 1.14E-05 2.77E-06 1.153 -250 59122 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TASVPK [K].tASVPk.[V] N-Term(TMT6plex); K6(TMT6plex) 4 Q3TQR3 Eukaryotic translation initiation factor 5 OS=Mus musculus OX=10090 GN=Eif5 PE=1 SV=1 Q3TKY2; Q05CH7; Q8BVV6; Q3TQR3 Eukaryotic translation initiation factor 5 (Fragment) OS=Mus musculus OX=10090 GN=Eif5 PE=2 SV=1; Eukaryotic translation initiation factor 5 OS=Mus musculus OX=10090 GN=Eif5 PE=2 SV=1; Eukaryotic translation initiation factor 5 OS=Mus musculus OX=10090 GN=Eif5 PE=1 SV=1; Eukaryotic translation initiation factor 5 OS=Mus musculus OX=10090 GN=Eif5 PE=1 SV=1 0 2 2 0.1681 0 1 1 1 530.84265 1060.67803 1060.67667 1.28 0.00068 0/0 0 0 8046555 HCD 30 MS2 15.60088 838.4 110 51.5815 14087 14087 14079 QEplus033719.raw F4 1141 592.1 872.1 759.3 837.7 828.5 152 2.26 1 FALSE 0.0023 0.04573 0.155 -250 59139 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIVNNVR [R].eIVNNVR.[R] N-Term(TMT6plex) 2 Q64511 DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2 F6U5K2; Q64511 DNA topoisomerase 2-beta (Fragment) OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=1; DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2 0 2 2 0.4605 0 1 1 1 536.81976 1072.63225 1072.63122 0.96 0.00051 0/0 0 0 7249443 HCD 30 MS2 25.44847 928.3 110 51.5865 14089 14089 14079 QEplus033719.raw F4 1185.2 633.7 827.6 508 1720.5 694.8 350 2.28 1 FALSE 0.0001603 0.003641 0.538 -250 59147 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APAAEPAIGEHER [R].aPAAEPAIGEHER.[A] N-Term(TMT6plex) 2 P28033 CCAAT/enhancer-binding protein beta OS=Mus musculus OX=10090 GN=Cebpb PE=1 SV=1 P28033-3; P28033 Isoform 2 of CCAAT/enhancer-binding protein beta OS=Mus musculus OX=10090 GN=Cebpb; CCAAT/enhancer-binding protein beta OS=Mus musculus OX=10090 GN=Cebpb PE=1 SV=1 0 3 3 0.6426 0 1 1 1 526.28381 1576.83689 1576.82809 5.58 0.00293 0/0 0 0 4817684.5 HCD 30 MS2 64.29341 496.6 110 51.5938 14091 14091 14090 QEplus033719.raw F4 560.4 423.7 541.8 391.3 544.6 518.1 296 2.49 1 FALSE 0.001248 0.01691 0.311 -250 59156 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETYELR [K].eTYELR.[Y] N-Term(TMT6plex) 2 Q9D7S7 60S ribosomal protein L22-like 1 OS=Mus musculus OX=10090 GN=Rpl22l1 PE=1 SV=1 Q9D7S7-2; Q9D7S7 Isoform 2 of 60S ribosomal protein L22-like 1 OS=Mus musculus OX=10090 GN=Rpl22l1; 60S ribosomal protein L22-like 1 OS=Mus musculus OX=10090 GN=Rpl22l1 PE=1 SV=1 0 2 2 0.3612 0 1 1 1 520.2854 1039.56352 1039.56214 1.33 0.00069 0/0 0 0 24171748 HCD 30 MS2 59.41207 778.7 57.977 51.5961 14092 14092 14090 QEplus033719.raw F4 828.8 682.5 790.1 538.6 1087.9 744.5 127 2.27 1 FALSE 0.006134 0.1005 0.005 -250 59171 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVVVTDGER [K].aVVVTDGER.[I] N-Term(TMT6plex) 4 Q3TSD4 Malic enzyme OS=Mus musculus OX=10090 GN=Me2 PE=2 SV=1 Q8BMF3; Q3TSD4; Q99KE1; Q3UZW5 "NADP-dependent malic enzyme, mitochondrial OS=Mus musculus OX=10090 GN=Me3 PE=1 SV=2; Malic enzyme OS=Mus musculus OX=10090 GN=Me2 PE=2 SV=1; NAD-dependent malic enzyme, mitochondrial OS=Mus musculus OX=10090 GN=Me2 PE=1 SV=1; malic domain-containing protein OS=Mus musculus OX=10090 GN=Me3 PE=2 SV=1" 0 2 2 0.5603 0 1 1 1 587.83527 1174.66326 1174.66292 0.29 0.00017 0/0 0 0 21822794 HCD 30 MS2 30.25251 1074.5 83.726 51.6029 14095 14095 14090 QEplus033719.raw F4 1240.2 964.3 1205.6 903.8 1114.2 1018.7 338 3.48 1 FALSE 1.14E-05 8.85E-07 1.247 -250 59188 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLEEENK [R].qLEEENk.[A] N-Term(TMT6plex); K7(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 0 2 2 0.5665 0 1 1 1 674.38019 1347.7531 1347.75202 0.8 0.00054 0/0 0 0 13636248 HCD 30 MS2 0 714.4 110 51.6076 14097 14097 14090 QEplus033719.raw F4 1195.3 113.9 420.2 1718 106.3 732.9 425 3.16 1 FALSE 0.0002518 0.005081 0.499 -250 59194 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNPLPK [KR].rNPLPk.[NH] N-Term(TMT6plex); K6(TMT6plex) 3 Q3B7Z2 Oxysterol-binding protein 1 OS=Mus musculus OX=10090 GN=Osbp PE=1 SV=3 Q3B7Z2; Q3B7Z2-2; Q6PGG2 Oxysterol-binding protein 1 OS=Mus musculus OX=10090 GN=Osbp PE=1 SV=3; Isoform 2 of Oxysterol-binding protein 1 OS=Mus musculus OX=10090 GN=Osbp; GEM-interacting protein OS=Mus musculus OX=10090 GN=Gmip PE=1 SV=1 1 3 3 0.3301 0 1 1 1 394.92905 1182.77259 1182.7723 0.24 0.0001 0/0 0 0 12523079 HCD 30 MS2 47.29547 771.2 76.244 51.6099 14098 14098 14090 QEplus033719.raw F4 782.3 497.4 792.9 771.2 833.5 949.7 59 3.12 1 FALSE 0.001335 0.01843 0.295 -250 59204 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQAVDVSPLRR [R].rQAVDVSPLRR.[V] N-Term(TMT6plex) 4 Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 P97461; D3Z1S8; D3YYM6; Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=3; 40S ribosomal protein S5 (Fragment) OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1; 40S ribosomal protein S5 (Fragment) OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1; 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 2 3 3 0.5923 0 1 1 1 509.30963 1525.91434 1525.91242 1.26 0.00064 0/0 0 0 9431959 HCD 30 MS2 14.75506 474.4 110 51.6124 14099 14099 14090 QEplus033719.raw F4 564.5 366.4 479.4 402.2 476.1 557.7 307 4.66 1 FALSE 1.14E-05 2.18E-09 1.743 -250 59207 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSDELK [R].dSDELk.[S] N-Term(TMT6plex); K6(TMT6plex) 11 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" Q3URW8; B9EKJ1; E9Q447; B2RXX6; A3KGU9; Q3V1V5; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.0563 0 1 1 2 582.83044 1164.65361 1164.65124 2.04 0.00119 0/0 0 0 4794762 HCD 30 MS2 33.27995 752.9 110 51.6149 14100 14100 14090 QEplus033719.raw F4 922.6 534.5 842.1 726.9 656.1 835 293 1.6 2 FALSE 0.005246 0.08951 0.036 -250 59217 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYSSFGGGR [R].aYSSFGGGR.[G] N-Term(TMT6plex) 5 Q80U88 Eukaryotic translation initiation factor 4H (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0038 PE=4 SV=3 Q80U88; Q9WUK2-2; Q9ET00; Q3V244; Q9WUK2 Eukaryotic translation initiation factor 4H (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0038 PE=4 SV=3; Isoform Short of Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h; eIF4H (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h PE=2 SV=1; Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h PE=1 SV=3 0 2 2 0.5847 0 1 1 1 565.79395 1130.58061 1130.57919 1.26 0.00071 0/0 0 0 48361768 HCD 30 MS2 33.32003 694.2 27.565 51.6222 14102 14102 14101 QEplus033719.raw F4 630 649 748.8 515 939.1 683.2 84 2.48 1 FALSE 1.14E-05 2.79E-05 0.963 -250 59232 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAEEEDEADPK [R].tAEEEDEADPk.[R] N-Term(TMT6plex); K11(TMT6plex) 2 Q66JR8 Ptms protein OS=Mus musculus OX=10090 GN=Ptms PE=2 SV=1 Q66JR8; Q9D0J8 Ptms protein OS=Mus musculus OX=10090 GN=Ptms PE=2 SV=1; Parathymosin OS=Mus musculus OX=10090 GN=Ptms PE=1 SV=3 0 3 3 0.7487 0 1 1 1 564.61816 1691.83994 1691.8376 1.38 0.00078 0/0 0 0 56039600 HCD 30 MS2 5.396027 470.8 32.234 51.6267 14104 14104 14101 QEplus033719.raw F4 501.6 423.4 521.5 313.2 614.1 451.2 161 3.82 1 FALSE 1.14E-05 1.23E-06 1.22 -250 59241 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLVDQR [R].vLVDQR.[W] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.1872 0 1 1 1 479.79813 958.58898 958.5883 0.71 0.00034 0/0 0 0 14566524 HCD 30 MS2 13.96997 1013.5 108.854 51.6292 14105 14105 14101 QEplus033719.raw F4 1193.7 671 1174.6 962.3 822.2 1257 227 2.03 1 FALSE 0.002148 0.04062 0.172 -250 59250 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIQTAVR [R].eIQTAVR.[L] N-Term(TMT6plex) 14 Q64475; Q64525 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3;Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64475; Q8CGP2; Q64525; Q8CGP1; P10854; A0JNS9; Q64478; P70696; Q8CGP2-2; Q8CBB6; Q6ZWY9; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 0 2 2 0.3209 0 1 1 1 523.31439 1045.62151 1045.62032 1.13 0.00059 0/0 0 0 11290304 HCD 30 MS2 38.01239 875.1 110 51.6317 14106 14106 14101 QEplus033719.raw F4 1007.1 775.5 927.1 649 1095.8 796 270 2.68 2 FALSE 0.0007056 0.01031 0.399 -250 59265 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQELVTK [K].rQELVTk.[I] N-Term(TMT6plex); K7(TMT6plex) 5 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q99LY0; Q91YQ5; Q5RKP4; Q3U900; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 1 2 2 0.3158 0 1 1 1 666.42432 1331.84136 1331.84111 0.19 0.00013 0/0 0 0 6155726.5 HCD 30 MS2 18.93195 315.2 110 51.6367 14108 14108 14101 QEplus033719.raw F4 329.4 222.6 316.2 338.8 358.5 325.9 387 1.9 1 FALSE 0.0008718 0.01189 0.375 -250 59285 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YLCCDDAR [K].yLccDDAR.[T] N-Term(TMT6plex); C3(Carbamidomethyl); C4(Carbamidomethyl) 5 B1AYC9 "Amyloid beta (A4) protein-binding, family B, member 1 interacting protein OS=Mus musculus OX=10090 GN=Apbb1ip PE=1 SV=1" F2Z4B7; B1AYC9; S4R2K5; G5E867; F2Z3U3 "Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 OS=Mus musculus OX=10090 GN=Raph1 PE=1 SV=1; Amyloid beta (A4) protein-binding, family B, member 1 interacting protein OS=Mus musculus OX=10090 GN=Apbb1ip PE=1 SV=1; Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 (Fragment) OS=Mus musculus OX=10090 GN=Raph1 PE=1 SV=2; Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 OS=Mus musculus OX=10090 GN=Raph1 PE=1 SV=1; Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 OS=Mus musculus OX=10090 GN=Raph1 PE=1 SV=2" 0 2 2 0.8824 0 1 1 1 651.29535 1301.58342 1301.58157 1.42 0.00092 0/0 0 0 6655419 HCD 30 MS2 0 443.5 110 51.644 14111 14111 14101 QEplus033719.raw F4 400.5 473.7 464.1 299.2 637.4 385.8 9 3.06 1 FALSE 5.44E-05 0.001822 0.607 -250 59290 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLNYTAR [K].tLNYTAR.[F] N-Term(TMT6plex) 2 Q9D7M8 DNA-directed RNA polymerase II subunit RPB4 OS=Mus musculus OX=10090 GN=Polr2d PE=1 SV=2 Q9D7M8; A0A3Q4L2S8 DNA-directed RNA polymerase II subunit RPB4 OS=Mus musculus OX=10090 GN=Polr2d PE=1 SV=2; DNA-directed RNA polymerase II subunit RPB4 OS=Mus musculus OX=10090 GN=Polr2d PE=1 SV=1 0 2 2 0.4236 0 1 1 1 534.30658 1067.60588 1067.60467 1.13 0.0006 0/0 0 0 6808682 HCD 30 MS2 32.08083 622.8 110 51.6537 14114 14114 14112 QEplus033719.raw F4 643.8 542 697.1 526.7 690.4 637.1 150 2.29 1 FALSE 0.001591 0.02431 0.249 -250 59298 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGFAGDDAPR [K].aGFAGDDAPR.[A] N-Term(TMT6plex) 36 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q3UAF6; Q3UD81; Q3U122; E9Q1F2; Q3UAA9; F6WX90; A0A1D5RM20; B2RRX1; A0A494B9T3; Q3U5R4; A1E281; Q3UAF7; G3UZ07; P62737; G3UYG0; P68134; Q3UBP6; D3YZY0; E9Q5F4; B1ATY1; P68033; P63260; Q61852; Q3UA89; Q3UGS0; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=4 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 3 3 0.7884 0 1 1 1 402.5423 1205.61234 1205.61122 0.93 0.00037 0/0 0 0 45171712 HCD 30 MS2 25.38632 237.3 19.056 51.656 14115 14115 14112 QEplus033719.raw F4 239.9 203.9 264.8 186.9 255.4 273.1 142 3.97 4 FALSE 1.14E-05 6.42E-05 0.894 -250 59320 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVNLGTTR [R].nVNLGTTR.[R] N-Term(TMT6plex) 18 E9Q6L0 CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2 E9Q6L0; Q80TV8-2; A0A087WNW8; Q80TV8; A0A087WQ31; A0A087WRK0; E9QNY9; E9QKH0; A5D6Q8; A0A0A6YXZ1; A0A087WQ95; B2RY22; A0A087WS18; A0A087WP42; A0A087WRE8; J3QP81; A0A087WQF1; A0A0N4SVH2 CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; Isoform 2 of CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; Clasp1 protein OS=Mus musculus OX=10090 GN=Clasp1 PE=2 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; Clasp1 protein OS=Mus musculus OX=10090 GN=Clasp1 PE=2 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1 0 2 2 0.5854 0 1 1 1 552.32263 1103.63799 1103.63704 0.86 0.00047 0/0 0 0 4711676 HCD 30 MS2 0 606.8 110 51.6632 14118 14118 14112 QEplus033719.raw F4 777.5 386.2 662 548.9 512.2 753.9 318 2.87 1 FALSE 2.26E-05 0.0009921 0.663 -250 59341 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSAELNK [K].qSAELNk.[L] N-Term(TMT6plex); K7(TMT6plex) 33 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 2 2 0.3309 0 1 1 1 624.37213 1247.73699 1247.73597 0.81 0.00051 0/0 0 0 5969549 HCD 30 MS2 35.07145 574.4 110 51.6705 14121 14121 14112 QEplus033719.raw F4 638.6 438.7 612.4 516.6 634.2 605.7 536 2.72 1 FALSE 5.44E-05 0.002494 0.577 -250 59350 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FEHLER [K].fEHLER.[V] N-Term(TMT6plex) 1 B2RXC1 Trafficking protein particle complex subunit 11 OS=Mus musculus OX=10090 GN=Trappc11 PE=1 SV=1 B2RXC1 Trafficking protein particle complex subunit 11 OS=Mus musculus OX=10090 GN=Trappc11 PE=1 SV=1 0 3 3 0.4056 0 1 1 1 353.8642 1059.57804 1059.57846 -0.4 -0.00014 0/0 0 0 5194703 HCD 30 MS2 35.43785 274.3 110 51.673 14122 14122 14112 QEplus033719.raw F4 284 212.4 305.7 249.2 263.4 330.9 207 2.49 1 FALSE 0.001929 0.03305 0.202 -250 59365 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRVDQALETR [R].qRVDQALETR.[D] N-Term(TMT6plex) 8 G3X9Q1 Integrin alpha-7 OS=Mus musculus OX=10090 GN=Itga7 PE=1 SV=1 Q61738-3; G3X9Q1; Q61738; Q61738-4; Q61738-2; Q61738-5; Q3TZS3; Q61738-6 Isoform Alpha-7X1B of Integrin alpha-7 OS=Mus musculus OX=10090 GN=Itga7; Integrin alpha-7 OS=Mus musculus OX=10090 GN=Itga7 PE=1 SV=1; Integrin alpha-7 OS=Mus musculus OX=10090 GN=Itga7 PE=1 SV=3; Isoform Alpha-7X2A of Integrin alpha-7 OS=Mus musculus OX=10090 GN=Itga7; Isoform Alpha-7X1A of Integrin alpha-7 OS=Mus musculus OX=10090 GN=Itga7; Isoform Alpha-7X2B of Integrin alpha-7 OS=Mus musculus OX=10090 GN=Itga7; Integrin alpha-7 OS=Mus musculus OX=10090 GN=Itga7 PE=1 SV=1; Isoform Alpha-7X1X2A of Integrin alpha-7 OS=Mus musculus OX=10090 GN=Itga7 1 2 2 0.5604 0 1 1 1 722.90753 1444.80779 1444.80696 0.58 0.00042 0/0 0 0 4377571.5 HCD 30 MS2 0 116.2 110 51.6828 14125 14125 14123 QEplus033719.raw F4 116.7 82 126.9 91.4 133.3 146.8 394 2.73 1 FALSE 1.14E-05 4.37E-05 0.926 -250 59371 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LYCENHAK [R].lYcENHAk.[A] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 1 P70271 PDZ and LIM domain protein 4 OS=Mus musculus OX=10090 GN=Pdlim4 PE=1 SV=3 P70271 PDZ and LIM domain protein 4 OS=Mus musculus OX=10090 GN=Pdlim4 PE=1 SV=3 0 3 3 0.6328 0 1 1 1 498.27124 1492.79917 1492.79826 0.61 0.0003 0/0 0 0 33354266 HCD 30 MS2 41.9464 1081.7 36.125 51.6851 14126 14126 14123 QEplus033719.raw F4 1563.4 609.2 1183.8 1016.6 833.8 1283.2 311 3.54 1 FALSE 1.14E-05 3.33E-05 0.948 -250 59378 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SISPDVR [R].sISPDVR.[S] N-Term(TMT6plex) 15 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WS99; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.3465 0 1 1 1 501.79288 1002.57848 1002.57813 0.35 0.00018 0/0 0 0 25959080 HCD 30 MS2 32.90755 885.3 41.391 51.6873 14127 14127 14123 QEplus033719.raw F4 1027.7 729.2 984.4 919.8 741.4 909 273 2.28 3 FALSE 0.001421 0.02031 0.278 -250 59396 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTVEQLR [R].dTVEQLR.[C] N-Term(TMT6plex) 2 Q68FL6 "Methionine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Mars1 PE=1 SV=1" E9QB02; Q68FL6 "Methionine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Mars1 PE=1 SV=1; Methionine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Mars1 PE=1 SV=1" 0 2 2 0.2111 0 1 1 1 545.30945 1089.61162 1089.61015 1.35 0.00073 0/0 0 0 12905368 HCD 30 MS2 53.17379 1090.7 110 51.6948 14130 14130 14123 QEplus033719.raw F4 1516.9 827.4 1235.3 945.3 810.9 1208.1 311 2.7 1 FALSE 0.004296 0.07872 0.065 -250 59415 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPAEESSSWR [R].gPAEESSSWR.[D] N-Term(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; A0A494B9I0 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Eukaryotic translation initiation factor 3 subunit A (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=1 0 2 2 0.7159 0 1 1 1 667.83112 1334.65495 1334.65381 0.86 0.00057 0/0 0 0 6177416 HCD 30 MS2 30.67412 358.5 110 51.7023 14133 14133 14123 QEplus033719.raw F4 388.1 292.6 365.4 311 427.6 366.1 111 3.52 1 FALSE 1.14E-05 1.41E-05 1.019 -250 59422 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAVGGTFDR [R].gAVGGTFDR.[L] N-Term(TMT6plex) 1 Q9DBL7 Bifunctional coenzyme A synthase OS=Mus musculus OX=10090 GN=Coasy PE=1 SV=2 Q9DBL7 Bifunctional coenzyme A synthase OS=Mus musculus OX=10090 GN=Coasy PE=1 SV=2 0 2 2 0.4727 0 1 1 1 554.80164 1108.59599 1108.59484 1.04 0.00058 0/0 0 0 6809937 HCD 30 MS2 52.80406 913.3 110 51.7096 14135 14135 14134 QEplus033719.raw F4 943.8 816.7 918.4 695.2 1181.4 924.5 207 2.56 1 FALSE 1.14E-05 0.0006189 0.704 -250 59432 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGEGQEK [R].lGEGQEk.[L] N-Term(TMT6plex); K7(TMT6plex) 2 Q9DBG5 Perilipin-3 OS=Mus musculus OX=10090 GN=Plin3 PE=1 SV=1 Q9DBG5; Q2XSQ4 Perilipin-3 OS=Mus musculus OX=10090 GN=Plin3 PE=1 SV=1; Perilipin OS=Mus musculus OX=10090 GN=Plin3 PE=2 SV=1 0 2 2 0.1481 0 1 1 1 609.85754 1218.70781 1218.70942 -1.32 -0.00081 0/0 0 0 2217780.75 HCD 30 MS2 62.38121 500.9 110 51.7121 14136 14136 14134 QEplus033719.raw F4 519.3 406.7 560.7 489.3 488.2 541 379 1.62 1 FALSE 0.001607 0.02563 0.24 -250 59442 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QCQALCVR [R].qcQALcVR.[L] N-Term(TMT6plex); C2(Carbamidomethyl); C6(Carbamidomethyl) 2 A0A2C9F2A2 Ras and Rab interactor 1 OS=Mus musculus OX=10090 GN=Rin1 PE=1 SV=1 A0A2C9F2A2; Q921Q7 Ras and Rab interactor 1 OS=Mus musculus OX=10090 GN=Rin1 PE=1 SV=1; Ras and Rab interactor 1 OS=Mus musculus OX=10090 GN=Rin1 PE=1 SV=1 0 2 2 0.4865 0 1 1 1 632.3302 1263.65312 1263.64993 2.53 0.0016 0/0 0 0 4428775 HCD 30 MS2 34.63382 407.1 110 51.7169 14138 14138 14134 QEplus033719.raw F4 442.8 329.7 444 396.8 425.9 403.5 209 2.22 1 FALSE 0.0003496 0.006608 0.466 -250 59476 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LCQFHR [R].lcQFHR.[Y] N-Term(TMT6plex); C2(Carbamidomethyl) 3 A0A140LHA2 Mitotic checkpoint protein BUB3 OS=Mus musculus OX=10090 GN=Bub3 PE=1 SV=1 A0A140LHA2; Q9CSI6; Q9WVA3 Mitotic checkpoint protein BUB3 OS=Mus musculus OX=10090 GN=Bub3 PE=1 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Bub3 PE=2 SV=1; Mitotic checkpoint protein BUB3 OS=Mus musculus OX=10090 GN=Bub3 PE=1 SV=2 0 3 3 0.5085 0 1 1 1 363.86569 1089.58252 1089.5825 0.02 0.00001 0/0 0 0 6014277.5 HCD 30 MS2 50.46501 307.4 110 51.7292 14143 14143 14134 QEplus033719.raw F4 353.7 239 344.7 248.3 293.9 364.6 293 2.95 1 FALSE 0.0005556 0.008401 0.432 -250 59486 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGCTMVVGSDGR [R].qGcTMVVGSDGR.[Y] N-Term(TMT6plex); C3(Carbamidomethyl) 1 Q8BZF8 Phosphoglucomutase-like protein 5 OS=Mus musculus OX=10090 GN=Pgm5 PE=1 SV=2 Q8BZF8 Phosphoglucomutase-like protein 5 OS=Mus musculus OX=10090 GN=Pgm5 PE=1 SV=2 0 2 2 0.7226 0 1 1 1 748.36511 1495.72295 1495.71946 2.33 0.00174 0/0 0 0 3003314 HCD 30 MS2 20.77301 290.7 110 51.7317 14144 14144 14134 QEplus033719.raw F4 295.9 192.2 309.6 304.8 278.6 363.4 94 2.92 1 FALSE 1.14E-05 6.94E-11 2.027 -250 59491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQAVDVSPLRR [R].rQAVDVSPLRR.[V] N-Term(TMT6plex) 4 Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 P97461; D3Z1S8; D3YYM6; Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=3; 40S ribosomal protein S5 (Fragment) OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1; 40S ribosomal protein S5 (Fragment) OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1; 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 2 2 2 0.4182 0 1 1 1 763.46173 1525.91619 1525.91242 2.46 0.00188 0/0 0 0 1112071.875 HCD 30 MS2 55.10244 48.2 110 51.739 14146 14146 14145 QEplus033719.raw F4 47.9 43.8 45 41.8 53.4 57.3 309 2.2 1 FALSE 0.001335 0.01835 0.296 -250 59496 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREEEIEAQEK [R].qREEEIEAQEk.[A] N-Term(TMT6plex); K11(TMT6plex) 4 A2ALF2 "DnaJ (Hsp40) homolog, subfamily C, member 8 OS=Mus musculus OX=10090 GN=Dnajc8 PE=1 SV=1" F7CXJ2; A2ALF2; A2ALF0; A2ALF3 "DnaJ homolog subfamily C member 8 (Fragment) OS=Mus musculus OX=10090 GN=Dnajc8 PE=1 SV=1; DnaJ (Hsp40) homolog, subfamily C, member 8 OS=Mus musculus OX=10090 GN=Dnajc8 PE=1 SV=1; DnaJ homolog subfamily C member 8 OS=Mus musculus OX=10090 GN=Dnajc8 PE=1 SV=1; DnaJ homolog subfamily C member 8 OS=Mus musculus OX=10090 GN=Dnajc8 PE=1 SV=1" 1 3 3 0.5855 0 1 1 1 616.33124 1846.97916 1846.99108 -6.45 -0.00397 0/0 0 0 2615481.75 HCD 30 MS2 0 295.5 110 51.7415 14147 14147 14145 QEplus033719.raw F4 326.4 267 295.1 254.2 348.3 282.3 347 5.09 1 FALSE 1.14E-05 5.38E-10 1.858 -250 59502 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TATPQQAQEVHEK [K].tATPQQAQEVHEk.[L] N-Term(TMT6plex); K13(TMT6plex) 3 P17751 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5 H7BXC3; P17751; P17751-2 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=1; Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5; Isoform 2 of Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 0 3 3 0.7479 0 1 1 1 642.3551 1925.05075 1925.04926 0.78 0.0005 0/0 0 0 52625056 HCD 30 MS2 39.44166 705.7 22.248 51.7461 14149 14149 14145 QEplus033719.raw F4 760 279.4 385.1 403.1 2006.6 400.2 374 5.83 1 FALSE 1.14E-05 6.17E-13 2.417 -250 59504 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQVEVLTNQR [R].rQVEVLTNQR.[A] N-Term(TMT6plex) 3 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; Q9JJY2; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin (Fragment) OS=Mus musculus OX=10090 GN=des PE=4 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 1 3 3 0.7063 0 1 1 1 491.28885 1471.85199 1471.85424 -1.53 -0.00075 0/0 0 0 30595268 HCD 30 MS2 19.52856 704.6 39.019 51.7483 14150 14150 14145 QEplus033719.raw F4 798.5 458.3 831.2 738 531.4 870.1 321 5.04 1 FALSE 1.14E-05 1.48E-09 1.775 -250 59510 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGESLWNQENR [R].hGESLWNQENR.[F] N-Term(TMT6plex) 1 Q5NCI4 Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam2 PE=1 SV=1 Q5NCI4 Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam2 PE=1 SV=1 0 3 3 0.7713 0 1 1 1 533.60126 1598.78922 1598.78728 1.21 0.00065 0/0 0 0 10675759 HCD 30 MS2 11.90722 484.6 110 51.7533 14152 14152 14145 QEplus033719.raw F4 544.7 319.3 473 578.8 449.4 542.3 147 5.29 1 FALSE 1.14E-05 1.76E-08 1.571 -250 59528 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHGVLGGK [R].eHGVLGGk.[L] N-Term(TMT6plex); K8(TMT6plex) 4 Q99LD8 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1" Q99LD8; A4FUQ8; G3UZR0; O08972 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1; Dimethylargininase (Fragment) OS=Mus musculus OX=10090 GN=Ddah2 PE=2 SV=1; Dimethylargininase (Fragment) OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1; Dimethylargininase OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1" 0 2 2 0.4842 0 1 1 1 627.88214 1254.75701 1254.75704 -0.03 -0.00002 0/0 0 0 1932821.875 HCD 30 MS2 50.027 357.2 110 51.7583 14154 14154 14145 QEplus033719.raw F4 325.7 291.8 405 328.8 407.9 383.8 287 2.85 1 FALSE 1.14E-05 2.87E-05 0.96 -250 59535 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQTAALR [K].vQTAALR.[A] N-Term(TMT6plex) 5 Q3UGH8; O35344 IBB domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Kpna4 PE=2 SV=1;Importin subunit alpha-4 OS=Mus musculus OX=10090 GN=Kpna3 PE=1 SV=1 Q3UGH8; O35343; O35344; Q9CT07; A0A0B4J1E7 IBB domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Kpna4 PE=2 SV=1; Importin subunit alpha-3 OS=Mus musculus OX=10090 GN=Kpna4 PE=1 SV=1; Importin subunit alpha-4 OS=Mus musculus OX=10090 GN=Kpna3 PE=1 SV=1; IBB domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Kpna3 PE=2 SV=1; Importin subunit alpha-3 OS=Mus musculus OX=10090 GN=Kpna4 PE=1 SV=1 0 2 2 0.2926 0 1 1 1 494.31134 987.6154 987.61485 0.57 0.00028 0/0 0 0 34163612 HCD 30 MS2 67.32889 623 18.532 51.7606 14155 14155 14145 QEplus033719.raw F4 631.7 526.3 700.8 492.9 747.2 639 81 2.7 2 FALSE 0.004889 0.08562 0.046 -250 59551 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGKGDSTLQVSSR [K].sGkGDSTLQVSSR.[L] N-Term(TMT6plex); K3(TMT6plex) 4 Q80WJ7 Protein LYRIC OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1 F6ZQL0; F6ZSG0; Q80WJ7; F6QHD1 Protein LYRIC (Fragment) OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1; Protein LYRIC (Fragment) OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1; Protein LYRIC OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1; Protein LYRIC (Fragment) OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=2 1 3 3 0.5133 0 1 1 1 594.00708 1780.00669 1779.9965 5.72 0.0034 0/0 0 0 3259264.25 HCD 30 MS2 0 400.7 110 51.7704 14158 14158 14156 QEplus033719.raw F4 398.7 346.5 469.8 368.2 369.5 451.5 435 2.63 1 FALSE 1.14E-05 5.59E-06 1.095 -250 59559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASGNLETK [K].aSGNLETk.[Y] N-Term(TMT6plex); K8(TMT6plex) 4 J3QMG3 Voltage-dependent anion-selective channel protein 3 OS=Mus musculus OX=10090 GN=Vdac3 PE=1 SV=1 J3QMG3; Q3TTN3; Q5EBQ0; Q60931 Voltage-dependent anion-selective channel protein 3 OS=Mus musculus OX=10090 GN=Vdac3 PE=1 SV=1; Voltage-dependent anion-selective channel protein 3 OS=Mus musculus OX=10090 GN=Vdac3 PE=2 SV=1; Voltage-dependent anion-selective channel protein 3 OS=Mus musculus OX=10090 GN=Vdac3 PE=2 SV=1; Voltage-dependent anion-selective channel protein 3 OS=Mus musculus OX=10090 GN=Vdac3 PE=1 SV=1 0 2 2 0.4621 0 1 1 1 639.37708 1277.74687 1277.74654 0.26 0.00017 0/0 0 0 8525906 HCD 30 MS2 17.42479 603.4 110 51.7729 14159 14159 14156 QEplus033719.raw F4 737.6 500.8 712.5 598.2 511.8 559.8 510 2.9 1 FALSE 1.14E-05 8.80E-05 0.868 -250 59567 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYDDMSPR [R].dYDDMSPR.[R] N-Term(TMT6plex) 13 Q5FWJ5 Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 P61979-3; Q3U9Q3; Q3TUA1; Q5FWJ5; H3BKD0; P61979; H3BLL4; B2M1R6; Q3TG17; Q3U6X2; H3BLP7; Q3TL71; Q3TJ38 Isoform 3 of Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 0 2 2 0.8714 0 1 1 1 614.27917 1227.55107 1227.55132 -0.2 -0.00012 0/0 0 0 5148415.5 HCD 30 MS2 39.26347 453.2 110 51.7754 14160 14160 14156 QEplus033719.raw F4 454 439.8 520.2 368 487.5 449.8 15 2.8 1 FALSE 0.0001603 0.003807 0.533 -250 59579 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGCTSLTPGPNCDR [K].sGcTSLTPGPNcDR.[F] N-Term(TMT6plex); C3(Carbamidomethyl); C12(Carbamidomethyl) 4 D3Z7P0 BRISC and BRCA1-A complex member 2 OS=Mus musculus OX=10090 GN=Babam2 PE=1 SV=3 D3Z7P0; A0A0J9YV56; Q8K3W0; E9Q0U3 BRISC and BRCA1-A complex member 2 OS=Mus musculus OX=10090 GN=Babam2 PE=1 SV=3; BRISC and BRCA1-A complex member 2 (Fragment) OS=Mus musculus OX=10090 GN=Babam2 PE=1 SV=1; BRISC and BRCA1-A complex member 2 OS=Mus musculus OX=10090 GN=Babam2 PE=1 SV=2; BRISC and BRCA1-A complex member 2 OS=Mus musculus OX=10090 GN=Babam2 PE=1 SV=1 0 2 2 0.8765 0 1 1 1 875.90656 1750.80583 1750.80498 0.49 0.00042 0/0 0 0 2104517.75 HCD 30 MS2 0 87.8 110 51.7805 14162 14162 14156 QEplus033719.raw F4 87.7 84.7 95 78.2 88.7 92.4 29 4.13 1 FALSE 1.14E-05 2.63E-09 1.727 -250 59582 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CGSVLVR [R].cGSVLVR.[L] N-Term(TMT6plex); C1(Carbamidomethyl) 11 Q3TXS9; Q3V2B9 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1;40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Gm10653 PE=2 SV=1 Q3TXS9; D3YVC1; Q9DC49; Q3TLE5; Q3TI78; Q3TXR5; P25444; Q3TL20; D3YWJ3; Q3UB36; Q3V2B9 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 (Fragment) OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=3; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Gm10653 PE=2 SV=1 0 2 2 0.2754 0 1 1 1 510.29688 1019.58647 1019.58692 -0.43 -0.00022 0/0 0 0 33503900 HCD 30 MS2 17.40949 799.9 35.235 51.7827 14163 14163 14156 QEplus033719.raw F4 1015 622.6 877.6 649 758.5 876.5 186 2.07 2 FALSE 0.0005556 0.008456 0.431 -250 59591 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LYEEGSNKR [K].lYEEGSNkR.[L] N-Term(TMT6plex); K8(TMT6plex) 2 Q9DCD8 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1 Q9DCD8; O70435 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1; Proteasome subunit alpha type-3 OS=Mus musculus OX=10090 GN=Psma3 PE=1 SV=3 1 3 3 0.5481 0 1 1 1 518.62927 1553.87326 1553.86878 2.89 0.0015 0/0 0 0 15020853 HCD 30 MS2 31.02664 924.1 110 51.7852 14164 14164 14156 QEplus033719.raw F4 992 793.5 1140 907 804.2 907.9 365 3.74 1 FALSE 1.14E-05 0.0001536 0.821 -250 59618 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAAEMGK [K].eAAEMGk.[G] N-Term(TMT6plex); K7(TMT6plex) 7 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; P62631; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Mus musculus OX=10090 GN=Eef1a2 PE=1 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 0 2 2 0.4444 0 1 1 1 597.3349 1193.66252 1193.66003 2.09 0.00125 0/0 0 0 21878276 HCD 30 MS2 15.78993 1316.5 110 51.7975 14168 14168 14167 QEplus033719.raw F4 1924.5 893 1541.6 1095 1102.4 1342.7 294 2.79 1 FALSE 0.001335 0.01866 0.293 -250 59626 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREEEIEAQEK [R].qREEEIEAQEk.[A] N-Term(TMT6plex); K11(TMT6plex) 4 A2ALF2 "DnaJ (Hsp40) homolog, subfamily C, member 8 OS=Mus musculus OX=10090 GN=Dnajc8 PE=1 SV=1" F7CXJ2; A2ALF2; A2ALF0; A2ALF3 "DnaJ homolog subfamily C member 8 (Fragment) OS=Mus musculus OX=10090 GN=Dnajc8 PE=1 SV=1; DnaJ (Hsp40) homolog, subfamily C, member 8 OS=Mus musculus OX=10090 GN=Dnajc8 PE=1 SV=1; DnaJ homolog subfamily C member 8 OS=Mus musculus OX=10090 GN=Dnajc8 PE=1 SV=1; DnaJ homolog subfamily C member 8 OS=Mus musculus OX=10090 GN=Dnajc8 PE=1 SV=1" 1 3 3 0.5105 0 1 1 1 616.3349 1846.99015 1846.99108 -0.5 -0.00031 0/0 0 0 3636338.5 HCD 30 MS2 35.56066 365.3 110 51.8 14169 14169 14167 QEplus033719.raw F4 373.2 324.7 376.9 319.2 415.2 382.3 373 4.29 1 FALSE 1.14E-05 3.65E-08 1.51 -250 59636 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQVEVLTNQR [R].rQVEVLTNQR.[A] N-Term(TMT6plex) 3 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; Q9JJY2; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin (Fragment) OS=Mus musculus OX=10090 GN=des PE=4 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 1 2 2 0.5443 0 1 1 1 736.43176 1471.85625 1471.85424 1.36 0.001 0/0 0 0 12354941 HCD 30 MS2 6.806118 189.3 110 51.805 14171 14171 14167 QEplus033719.raw F4 216.5 64 161.1 309.4 78.5 306 342 3.27 1 FALSE 1.14E-05 4.40E-05 0.925 -250 59648 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YMQQNIR [R].yMQQNIR.[Y] N-Term(TMT6plex) 4 Q3UIC2 Cadherin-2 OS=Mus musculus OX=10090 GN=Cdh2 PE=2 SV=1 Q3UIC2; Q8BSI9; P15116; D3YYT0 Cadherin-2 OS=Mus musculus OX=10090 GN=Cdh2 PE=2 SV=1; Cadherin-2 OS=Mus musculus OX=10090 GN=Cdh2 PE=2 SV=1; Cadherin-2 OS=Mus musculus OX=10090 GN=Cdh2 PE=1 SV=2; Cadherin-2 OS=Mus musculus OX=10090 GN=Cdh2 PE=1 SV=1 0 2 2 0.5543 0 1 1 1 591.32098 1181.63469 1181.62984 4.1 0.00242 0/0 0 0 5157905.5 HCD 30 MS2 26.44803 503 110 51.81 14173 14173 14167 QEplus033719.raw F4 458.3 410.1 598.5 444.4 550.5 556 161 2.67 1 FALSE 0.0002909 0.005969 0.479 -250 59655 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGESLWNQENR [R].hGESLWNQENR.[F] N-Term(TMT6plex) 1 Q5NCI4 Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam2 PE=1 SV=1 Q5NCI4 Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam2 PE=1 SV=1 0 2 2 0.7962 0 1 1 1 799.89612 1598.78496 1598.78728 -1.45 -0.00116 0/0 0 0 2964774.5 HCD 30 MS2 0 146.2 110 51.8126 14174 14174 14167 QEplus033719.raw F4 186.5 39.8 129.3 257.9 75.8 188 123 4.17 1 FALSE 1.14E-05 8.61E-09 1.63 -250 59670 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REHALTSGTIK [K].rEHALTSGTIk.[A] N-Term(TMT6plex); K11(TMT6plex) 4 P83940 Elongin-C OS=Mus musculus OX=10090 GN=Eloc PE=1 SV=1 P83940; A0A087WNT1; A0A087WPE4; A0A087WQE6 Elongin-C OS=Mus musculus OX=10090 GN=Eloc PE=1 SV=1; Elongin-C OS=Mus musculus OX=10090 GN=Eloc PE=1 SV=1; Elongin-C (Fragment) OS=Mus musculus OX=10090 GN=Eloc PE=1 SV=1; Elongin-C (Fragment) OS=Mus musculus OX=10090 GN=Eloc PE=1 SV=1 1 3 3 0.5329 0 1 1 1 557.67029 1670.99631 1670.99537 0.56 0.00031 0/0 0 0 10301454 HCD 30 MS2 12.38213 394.7 110 51.8173 14176 14176 14167 QEplus033719.raw F4 484.1 305.3 408.8 356.8 541.5 271.6 277 4.86 1 FALSE 1.14E-05 2.35E-11 2.116 -250 59675 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTHDQLSEPSEVR [K].dTHDQLSEPSEVR.[S] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.7534 0 1 1 1 871.4317 1741.85613 1741.85542 0.4 0.00035 0/0 0 0 2562624.25 HCD 30 MS2 0 126.1 110 51.8198 14177 14177 14167 QEplus033719.raw F4 133.7 107.5 137.3 125.3 134.9 118.1 134 4.38 2 FALSE 1.14E-05 4.34E-11 2.066 -250 59681 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNTTIPTK [K].rNTTIPTk.[Q] N-Term(TMT6plex); K8(TMT6plex) 18 Q3TEK2; B7U582 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1;Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; B7U582; Q3TH04; P63017; Q3TQ13; Q3TB63; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16; P17156 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Mus musculus OX=10090 GN=Hspa2 PE=1 SV=2 1 3 3 0.5 0 1 1 1 463.62619 1388.86402 1388.86257 1.04 0.00048 0/0 0 0 331069088 HCD 30 MS2 4.124011 368.3 3.432 51.8271 14179 14179 14178 QEplus033719.raw F4 384.5 249.9 390.6 289.8 431.5 463.6 439 4.16 2 FALSE 1.14E-05 7.50E-07 1.261 -250 59688 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVDADEEDSRKK [K].dVDADEEDSRkk.[D] N-Term(TMT6plex); K11(TMT6plex); K12(TMT6plex) 2 Q99L45 Eukaryotic translation initiation factor 2 subunit 2 OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1 E0CXJ3; Q99L45 Eukaryotic translation initiation factor 2 subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1; Eukaryotic translation initiation factor 2 subunit 2 OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1 2 3 3 0.5802 0 1 1 1 698.71527 2094.13126 2094.12819 1.47 0.00102 0/0 0 0 3048929.5 HCD 30 MS2 20.33729 184.4 110 51.8297 14180 14180 14178 QEplus033719.raw F4 198.9 155.7 206.9 137.9 220 187.2 415 2.62 1 FALSE 9.73E-05 0.003023 0.557 -250 59696 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTHDQLSEPSEVR [K].dTHDQLSEPSEVR.[S] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.7165 0 1 1 1 581.29089 1741.85813 1741.85542 1.55 0.0009 0/0 0 0 61082504 HCD 30 MS2 24.19951 182.1 26.022 51.8319 14181 14181 14178 QEplus033719.raw F4 194 139.9 197.5 170.3 198.7 192.3 154 5.68 2 FALSE 1.14E-05 1.97E-10 1.941 -250 59702 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVQGPPGPAGPR [R].gVQGPPGPAGPR.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 3 3 0.7021 0 1 1 1 440.25262 1318.74332 1318.7429 0.32 0.00014 0/0 0 0 42661328 HCD 30 MS2 36.59106 319.4 23.255 51.8342 14182 14182 14178 QEplus033719.raw F4 356.5 277.4 349 238.8 368 326.6 393 4.33 1 FALSE 1.14E-05 1.04E-08 1.614 -250 59707 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AWIAHTQQR [R].aWIAHTQQR.[H] N-Term(TMT6plex) 5 Q8BH97 Reticulocalbin-3 OS=Mus musculus OX=10090 GN=Rcn3 PE=1 SV=1 A0A1B0GRI0; A0A1B0GSK5; A0A1B0GR19; A0A1B0GR86; Q8BH97 Reticulocalbin-3 (Fragment) OS=Mus musculus OX=10090 GN=Rcn3 PE=1 SV=1; Reticulocalbin-3 (Fragment) OS=Mus musculus OX=10090 GN=Rcn3 PE=1 SV=1; Reticulocalbin-3 (Fragment) OS=Mus musculus OX=10090 GN=Rcn3 PE=1 SV=1; Reticulocalbin-3 (Fragment) OS=Mus musculus OX=10090 GN=Rcn3 PE=1 SV=1; Reticulocalbin-3 OS=Mus musculus OX=10090 GN=Rcn3 PE=1 SV=1 0 3 3 0.4925 0 1 1 1 447.25317 1339.74497 1339.74323 1.29 0.00058 0/0 0 0 31667714 HCD 30 MS2 17.57918 355.2 36.375 51.8365 14183 14183 14178 QEplus033719.raw F4 352.5 275.5 367 320.5 373.5 442.3 333 3.98 1 FALSE 1.14E-05 1.50E-06 1.204 -250 59716 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDELTRK [R].cDELTRk.[M] N-Term(TMT6plex); C1(Carbamidomethyl); K7(TMT6plex) 8 Q5U222 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1 Q9CSD9; Q3UXW3; Q5U222; Q3V0Z8; A1L333; S4R1I6; Q61656; Q8BTS0 Helicase C-terminal domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 1 3 3 0.5132 0 1 1 1 460.5957 1379.77256 1379.77171 0.62 0.00028 0/0 0 0 11789846 HCD 30 MS2 31.44599 954.5 110 51.839 14184 14184 14178 QEplus033719.raw F4 1578.6 660.5 871.4 559.4 1060.7 996.4 405 2.28 1 FALSE 0.002474 0.04881 0.146 -250 59724 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HFRPELEDR [R].hFRPELEDR.[M] N-Term(TMT6plex) 3 D3YUM1 "NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1" D3Z1U9; D3YUM1; Q91YT0 "NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1; NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1; NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1" 0 4 4 0.6683 0 1 1 1 357.69519 1427.75893 1427.75928 -0.24 -0.00009 0/0 0 0 10976960 HCD 30 MS2 29.07891 350.3 110 51.8414 14185 14185 14178 QEplus033719.raw F4 370.7 222.3 408.9 307.9 290.1 501.9 268 4.01 1 FALSE 1.14E-05 0.0002373 0.785 -250 59740 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYQVMR [K].tYQVMR.[D] N-Term(TMT6plex) 1 Q99JI1 Musculoskeletal embryonic nuclear protein 1 OS=Mus musculus OX=10090 GN=Mustn1 PE=1 SV=1 Q99JI1 Musculoskeletal embryonic nuclear protein 1 OS=Mus musculus OX=10090 GN=Mustn1 PE=1 SV=1 0 2 2 0.2663 0 1 1 1 513.78418 1026.56108 1026.56037 0.7 0.00036 0/0 0 0 19433532 HCD 30 MS2 34.49225 1056.9 74.282 51.8462 14187 14187 14178 QEplus033719.raw F4 1254.5 599 1128.7 1204.8 829 1325.4 157 1.84 1 FALSE 0.003278 0.06383 0.104 -250 59749 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGSPYCEK [K].dGSPYcEk.[D] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 15 E9Q9C7 Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1 E9Q9C7; E9QK41; Q8K4G5-5; Q8K4G5-2; Q9EPW6; Q8K4G5; Q3TAG5; B9EIV0; E9Q9C4; F6YHE5; E9Q9C1; E9Q9C0; Q8K4G5-4; Q3UP03; E9Q9C2 Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Isoform 5 of Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1; Isoform 2 of Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1; Actin-binding double zinc finger protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ablim1 PE=2 SV=1; Ablim1 protein OS=Mus musculus OX=10090 GN=Ablim1 PE=2 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Isoform 4 of Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ablim1 PE=2 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1 0 2 2 0.4868 0 1 1 1 707.35742 1413.70757 1413.70844 -0.62 -0.00043 0/0 0 0 3919017.5 HCD 30 MS2 21.41776 333.3 110 51.8487 14188 14188 14178 QEplus033719.raw F4 301.4 250.3 422.5 353.1 230.6 441.6 122 2.65 1 FALSE 4.43E-05 0.001431 0.63 -250 59767 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEEDRYFR [K].aEEDRYFR.[E-] N-Term(TMT6plex) 3 E9PV44 ATP synthase F1 subunit epsilon OS=Mus musculus OX=10090 GN=Atpif1 PE=1 SV=1 E9PV44; Q8BTA7; O35143 "ATP synthase F1 subunit epsilon OS=Mus musculus OX=10090 GN=Atpif1 PE=1 SV=1; ATP synthase F1 subunit epsilon OS=Mus musculus OX=10090 GN=Atpif1 PE=2 SV=1; ATPase inhibitor, mitochondrial OS=Mus musculus OX=10090 GN=Atp5if1 PE=1 SV=2" 1 3 3 0.5899 0 1 1 1 438.89313 1314.66483 1314.66398 0.65 0.00028 0/0 0 0 51685928 HCD 30 MS2 7.253846 431.1 24.986 51.8631 14193 14193 14189 QEplus033719.raw F4 433.1 402 505 368.7 488.1 389.4 130 3.17 1 FALSE 0.0005076 0.008007 0.439 -250 59780 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNVEAIK [K].rNVEAIk.[G] N-Term(TMT6plex); K7(TMT6plex) 4 Q5SX40 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1 Q9ESW6; Q5SX40; B2RWX0; Q3TT35 "Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1" 1 3 3 0.2853 0 1 1 1 429.94379 1287.81681 1287.81489 1.49 0.00064 0/0 0 0 8125467 HCD 30 MS2 53.4343 938 110 51.8681 14195 14195 14189 QEplus033719.raw F4 1294 400.7 661.4 1442.5 627.6 1201.7 432 3.19 1 FALSE 0.001108 0.01438 0.34 -250 59786 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IEDNQIR [R].iEDNQIR.[A] N-Term(TMT6plex) 2 Q640N1 Adipocyte enhancer-binding protein 1 OS=Mus musculus OX=10090 GN=Aebp1 PE=1 SV=1 Q640N1-2; Q640N1 Isoform 2 of Adipocyte enhancer-binding protein 1 OS=Mus musculus OX=10090 GN=Aebp1; Adipocyte enhancer-binding protein 1 OS=Mus musculus OX=10090 GN=Aebp1 PE=1 SV=1 0 2 2 0.0621 0 1 1 1 558.81189 1116.6165 1116.62105 -4.07 -0.00228 0/0 0 0 5194877 HCD 30 MS2 52.73152 536 110 51.8706 14196 14196 14189 QEplus033719.raw F4 535.5 490.3 552.2 464.1 680 493.7 254 1.45 1 FALSE 0.005644 0.09495 0.02 -250 59794 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TATPQQAQEVHEK [K].tATPQQAQEVHEk.[L] N-Term(TMT6plex); K13(TMT6plex) 3 P17751 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5 H7BXC3; P17751; P17751-2 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=1; Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5; Isoform 2 of Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 0 2 2 0.8571 0 1 1 1 963.02856 1925.04985 1925.04926 0.31 0.0003 0/0 0 0 4404683.5 HCD 30 MS2 22.61925 103.2 110 51.8731 14197 14197 14189 QEplus033719.raw F4 101.6 55.6 92.5 117.8 130.8 121.1 381 4.97 1 FALSE 1.14E-05 2.49E-11 2.112 -250 59798 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTYNHK [K].lTYNHk.[G] N-Term(TMT6plex); K6(TMT6plex) 5 P22892 AP-1 complex subunit gamma-1 OS=Mus musculus OX=10090 GN=Ap1g1 PE=1 SV=3 Q8CC03; Q8CBB7; Q8BSZ7; Q3UKX8; P22892 GAE domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ap1g1 PE=2 SV=1; AP-1 complex subunit gamma OS=Mus musculus OX=10090 GN=Ap1g1 PE=1 SV=1; GAE domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ap1g1 PE=2 SV=1; AP-1 complex subunit gamma OS=Mus musculus OX=10090 GN=Ap1g1 PE=2 SV=1; AP-1 complex subunit gamma-1 OS=Mus musculus OX=10090 GN=Ap1g1 PE=1 SV=3 0 3 3 0.4349 0 1 1 1 411.91669 1233.73551 1233.73558 -0.06 -0.00002 0/0 0 0 3705231.5 HCD 30 MS2 50.13256 534.4 110 51.8756 14198 14198 14189 QEplus033719.raw F4 684.6 371.9 507.1 428.1 681.8 533 533 2.92 1 FALSE 0.001506 0.02264 0.26 -250 59817 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALYEAGER [R].aLYEAGER.[R] N-Term(TMT6plex) 6 B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 Q4FK88; Q3US43; Q4FJV4; Q3U5N9; A0A494BBD8; B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 0 2 2 0.6355 0 1 1 1 569.30945 1137.61162 1137.61015 1.29 0.00073 0/0 0 0 35998236 HCD 30 MS2 6.785688 784.4 44.196 51.8874 14202 14202 14200 QEplus033719.raw F4 696.9 1037.7 948.7 511 874 638.1 209 3.21 1 FALSE 1.14E-05 0.0001407 0.829 -250 59844 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TATPQQAQEVHEK [K].tATPQQAQEVHEk.[L] N-Term(TMT6plex); K13(TMT6plex) 3 P17751 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5 H7BXC3; P17751; P17751-2 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=1; Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5; Isoform 2 of Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 0 4 4 0.6821 0 1 1 1 482.01804 1925.05031 1925.04926 0.55 0.00026 0/0 0 0 21391814 HCD 30 MS2 33.40902 674.8 51.135 51.8964 14206 14206 14200 QEplus033719.raw F4 1043.5 397 640.3 603.3 539.2 825.5 382 4.53 1 FALSE 1.14E-05 0.0001136 0.846 -250 59850 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HAEEWDK [R].hAEEWDk.[I] N-Term(TMT6plex); K7(TMT6plex) 4 Q3TPD9 Amine oxidase (Fragment) OS=Mus musculus OX=10090 GN=Maoa PE=2 SV=1 Q3TPD9; Q3UJ53; Q3U2X5; Q64133 Amine oxidase (Fragment) OS=Mus musculus OX=10090 GN=Maoa PE=2 SV=1; Amine oxidase OS=Mus musculus OX=10090 GN=Maoa PE=2 SV=1; Amine oxidase OS=Mus musculus OX=10090 GN=Maoa PE=2 SV=1; Amine oxidase [flavin-containing] A OS=Mus musculus OX=10090 GN=Maoa PE=1 SV=3 0 3 3 0.5956 0 1 1 1 458.24741 1372.72766 1372.72614 1.11 0.00051 0/0 0 0 16379963 HCD 30 MS2 62.78649 798.4 41.351 51.8987 14207 14207 14200 QEplus033719.raw F4 981.4 522.7 770.3 932.8 665.3 917.8 236 3.19 1 FALSE 0.0002909 0.00594 0.48 -250 59864 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAEGAGTEEEGTPK [K].kAEGAGTEEEGTPk.[E] N-Term(TMT6plex); K1(TMT6plex); K14(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 1 3 3 0.6399 0 1 1 1 697.72168 2091.15049 2091.15367 -1.52 -0.00106 0/0 0 0 4064130.25 HCD 30 MS2 0 437.4 110 51.9037 14209 14209 14200 QEplus033719.raw F4 436 442.1 502.5 339.9 468.4 435.3 494 6.86 1 FALSE 1.14E-05 6.31E-16 3.842 -250 59867 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FNYSGSGGR [K].fNYSGSGGR.[S] N-Term(TMT6plex) 3 A0A1L1STE4 Interleukin enhancer-binding factor 3 OS=Mus musculus OX=10090 GN=Ilf3 PE=1 SV=1 A0A1L1STE4; Q9Z1X4; Q9Z1X4-3 Interleukin enhancer-binding factor 3 OS=Mus musculus OX=10090 GN=Ilf3 PE=1 SV=1; Interleukin enhancer-binding factor 3 OS=Mus musculus OX=10090 GN=Ilf3 PE=1 SV=2; Isoform 3 of Interleukin enhancer-binding factor 3 OS=Mus musculus OX=10090 GN=Ilf3 0 2 2 0.7516 0 1 1 1 587.29773 1173.58818 1173.585 2.71 0.00159 0/0 0 0 7197899 HCD 30 MS2 43.22472 1046.2 110 51.9062 14210 14210 14200 QEplus033719.raw F4 1081.8 704.7 1012.7 1287.1 933.3 1257.8 71 3.22 1 FALSE 1.14E-05 0.000526 0.718 -250 59876 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGATPAEDDEDK [K].kGATPAEDDEDk.[D] N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex) 12 Q91VK2; Q80T06 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1;Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1 Q91VK2; P57776-2; F6ZFU0; Q80T06; A0A0R4J1E2; D3YY68; E9QN08; A0A0R4J1L2; D3YZT9; P57776-3; P57776; D3YUQ9 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 2 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 3 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=3; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=8 1 3 3 0.7431 0 1 1 1 655.02557 1963.06217 1963.05871 1.76 0.00115 0/0 0 0 2889091 HCD 30 MS2 0 292.1 110 51.916 14213 14213 14211 QEplus033719.raw F4 338.7 205.5 272.2 257.5 353.9 324.6 427 5.06 2 FALSE 1.14E-05 1.41E-14 2.728 -250 59881 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MFGGSGTSSR [R].mFGGSGTSSR.[S] N-Term(TMT6plex) 1 Q3TWV0 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 Q3TWV0 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 0 2 2 0.7162 0 1 1 1 608.302 1215.59673 1215.59894 -1.82 -0.0011 0/0 0 0 1868609.125 HCD 30 MS2 50.98845 347.8 110 51.9185 14214 14214 14211 QEplus033719.raw F4 352.3 277.1 363.6 294.2 371.2 428.2 65 2.29 1 FALSE 0.00552 0.09355 0.024 -250 59905 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVEELQR [R].kVEELQR.[E] N-Term(TMT6plex); K1(TMT6plex) 4 Q6P572 "Phosphatidylinositol-3,5-bisphosphate 3-phosphatase OS=Mus musculus OX=10090 GN=Mtmr2 PE=1 SV=1" Q6P572; Q5DU01; Q3V030; Q9Z2D1 "Phosphatidylinositol-3,5-bisphosphate 3-phosphatase OS=Mus musculus OX=10090 GN=Mtmr2 PE=1 SV=1; Phosphatidylinositol-3,5-bisphosphate 3-phosphatase (Fragment) OS=Mus musculus OX=10090 GN=mKIAA1073 PE=3 SV=1; Phosphatidylinositol-3,5-bisphosphate 3-phosphatase OS=Mus musculus OX=10090 GN=Mtmr2 PE=2 SV=1; Myotubularin-related protein 2 OS=Mus musculus OX=10090 GN=Mtmr2 PE=1 SV=3" 1 3 3 0.0714 0 1 1 1 453.94962 1359.83429 1359.83602 -1.27 -0.00058 0/0 0 0 9295574 HCD 30 MS2 41.39461 816.7 110 51.928 14218 14218 14211 QEplus033719.raw F4 829 599.6 811.5 877.8 833.1 949.4 582 1.82 1 FALSE 0.002956 0.05767 0.12 -250 59915 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDSIPVNR [K].dDSIPVNR.[N] N-Term(TMT6plex) 2 Q921G7 "Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Mus musculus OX=10090 GN=Etfdh PE=1 SV=1" Q921G7; Q6PF96 "Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Mus musculus OX=10090 GN=Etfdh PE=1 SV=1; Electron transfer flavoprotein-ubiquinone oxidoreductase OS=Mus musculus OX=10090 GN=Etfdh PE=1 SV=1" 0 2 2 0.6046 0 1 1 1 572.81146 1144.61565 1144.61597 -0.28 -0.00016 0/0 0 0 6996023 HCD 30 MS2 36.42113 600.6 110 51.9305 14219 14219 14211 QEplus033719.raw F4 661.8 442.6 642.1 618.7 560.9 677.2 149 2.63 1 FALSE 5.44E-05 0.002053 0.596 -250 59921 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GETSATQEETSTAQAGTSTAQAR [R].gETSATQEETSTAQAGTSTAQAR.[T] N-Term(TMT6plex) 4 A0A1Z3MI45 Ifi204 OS=Mus musculus domesticus OX=10092 GN=Ifi204 PE=3 SV=1 A0A1Z3MHY2; A0A1Z3MI45; P0DOV2; B2RWU7 PyhinA OS=Mus musculus domesticus OX=10092 GN=pyhinA PE=3 SV=1; Ifi204 OS=Mus musculus domesticus OX=10092 GN=Ifi204 PE=3 SV=1; Interferon-activable protein 204 OS=Mus musculus OX=10090 GN=Ifi204 PE=1 SV=1; AI607873 protein OS=Mus musculus OX=10090 GN=Ifi207 PE=2 SV=1 0 3 3 0.8323 0 1 1 1 838.07086 2512.19803 2512.19605 0.79 0.00066 0/0 0 0 1711699.75 HCD 30 MS2 0 19.1 110 51.933 14220 14220 14211 QEplus033719.raw F4 17.9 21.2 22.8 11.5 22.7 18.8 135 8.29 1 FALSE 1.14E-05 9.94E-15 2.757 -250 59928 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGREEIVK [R].eGREEIVk.[V] N-Term(TMT6plex); K8(TMT6plex) 1 Q9D2R0 Acetoacetyl-CoA synthetase OS=Mus musculus OX=10090 GN=Aacs PE=1 SV=1 Q9D2R0 Acetoacetyl-CoA synthetase OS=Mus musculus OX=10090 GN=Aacs PE=1 SV=1 1 2 2 0.2335 0 1 1 1 709.4245 1417.84172 1417.8415 0.16 0.00011 0/0 0 0 3131477.75 HCD 30 MS2 0 197.6 110 51.9356 14221 14221 14211 QEplus033719.raw F4 184.5 186.6 230 146.5 233.4 204.4 504 1.97 1 FALSE 0.009694 0.1882 -0.124 -250 59936 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHVECLK [K].gHVEcLk.[V] N-Term(TMT6plex); C5(Carbamidomethyl); K7(TMT6plex) 2 Q9EP71 Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1 Q9EP71; A0A2I3BPY7 Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1; Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1 0 3 3 0.5411 0 1 1 1 434.25342 1300.7457 1300.74476 0.72 0.00031 0/0 0 0 19701066 HCD 30 MS2 25.59676 641.9 67.024 51.9429 14223 14223 14222 QEplus033719.raw F4 613.9 601.7 681.8 486.5 816.3 651.4 358 3.77 1 FALSE 1.14E-05 0.000127 0.837 -250 59956 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLEEEEQR [K].vLEEEEQR.[R] N-Term(TMT6plex) 9 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; Q3UGC3; E9QA15; F6ZAW1; E9Q0M9; D3Z6I7; S4R1T7; E9QA16; F6QLP8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 0 2 2 0.4781 0 1 1 1 630.83508 1260.66289 1260.66331 -0.33 -0.00021 0/0 0 0 4077088.25 HCD 30 MS2 11.80291 434.2 110 51.9504 14226 14226 14222 QEplus033719.raw F4 421.6 411.4 461.9 326.9 591 392.3 261 3.43 1 FALSE 1.14E-05 0.0003196 0.76 -250 59972 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAEDYCVDENGQR [K].tAEDYcVDENGQR.[W] N-Term(TMT6plex); C6(Carbamidomethyl) 3 Q9QUJ7 Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus OX=10090 GN=Acsl4 PE=1 SV=2 Q9QUJ7; Q9QUJ7-2; Q8BW44 Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus OX=10090 GN=Acsl4 PE=1 SV=2; Isoform Short of Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus OX=10090 GN=Acsl4; AMP-binding domain-containing protein OS=Mus musculus OX=10090 GN=Acsl4 PE=2 SV=1 0 2 2 0.8192 0 1 1 1 893.39697 1785.78667 1785.79111 -2.49 -0.00222 0/0 0 0 3456029.75 HCD 30 MS2 16.06773 123.3 110 51.9579 14229 14229 14222 QEplus033719.raw F4 136.7 69 133.6 146 79.1 175.2 24 4.59 1 FALSE 1.14E-05 2.81E-12 2.291 -250 59977 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAEVESSQPLRNPQR [R].gAEVESSQPLRNPQR.[K] N-Term(TMT6plex) 9 B9EKB8 Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1 Q8C6V9; Q7TMR1; Q8K0J1; Q8C2F9; B9EKB8; Q80VF2; B7ZWC4; Q4L138; Q07113 Fibronectin type-II domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Igf2r protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Igf2r protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Fibronectin type-II domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Igf2r protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Insulin-like growth factor 2 receptor (Fragment) OS=Mus musculus molossinus OX=57486 GN=Igf2r PE=2 SV=1; Cation-independent mannose-6-phosphate receptor OS=Mus musculus OX=10090 GN=Igf2r PE=1 SV=1 1 3 3 0.5707 0 1 1 1 633.00787 1897.00907 1897.0089 0.09 0.00005 0/0 0 0 3287524 HCD 30 MS2 51.69197 335.6 110 51.9604 14230 14230 14222 QEplus033719.raw F4 376.2 278.2 374.2 308.4 334.8 342 390 3.68 1 FALSE 1.14E-05 1.25E-07 1.409 -250 59984 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEPYENDGEK [K].nEPYENDGEk.[G] N-Term(TMT6plex); K10(TMT6plex) 2 Q8JZZ5 Phosphatidylinositol transfer protein beta isoform OS=Mus musculus OX=10090 GN=Pitpnb PE=1 SV=1 Q8JZZ5; P53811 Phosphatidylinositol transfer protein beta isoform OS=Mus musculus OX=10090 GN=Pitpnb PE=1 SV=1; Phosphatidylinositol transfer protein beta isoform OS=Mus musculus OX=10090 GN=Pitpnb PE=1 SV=2 0 2 2 0.4086 0 1 1 1 826.91357 1652.81987 1652.8168 1.86 0.00154 0/0 0 0 2464703.5 HCD 30 MS2 0 229.9 110 51.963 14231 14231 14222 QEplus033719.raw F4 236.1 195.6 232.6 183 308.8 223.1 145 3.94 1 FALSE 1.14E-05 1.30E-08 1.596 -250 59999 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVCDENGSK [K].vVcDENGSk.[G] N-Term(TMT6plex); C3(Carbamidomethyl); K9(TMT6plex) 13 P29341; Q99LF8 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2;Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1 P29341; Q3U8U8; Q99LF8; Q9D4E6; Q91YZ8; A3KFU5; Q3UX16; Q8BN32; A3KFU8; Q6PHQ9; Q99KL3; V9GXG3; Q9DBE3 "Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc6 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Poly(A)-binding protein, cytoplasmic 4 OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1" 0 2 2 0.6667 0 1 1 1 733.39301 1465.77873 1465.7721 4.53 0.00332 0/0 0 0 3666309.5 HCD 30 MS2 0 338.3 110 51.9728 14234 14234 14233 QEplus033719.raw F4 414 257.8 350.1 297 389.5 321.6 297 3.39 2 FALSE 1.14E-05 2.16E-06 1.174 -250 60019 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAQQELEEQTRR [K].kAQQELEEQTRR.[A] N-Term(TMT6plex); K1(TMT6plex) 2 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 2 4 4 0.5645 0 1 1 1 494.28354 1974.11233 1974.11326 -0.47 -0.00023 0/0 0 0 12773775 HCD 30 MS2 22.77251 641.3 61.845 51.9798 14237 14237 14233 QEplus033719.raw F4 843.9 516.6 658.2 515.7 651 662.3 470 3.49 1 FALSE 1.14E-05 3.55E-06 1.133 -250 60072 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGEQESK [R].lGEQESk.[R] N-Term(TMT6plex); K7(TMT6plex) 2 Q4FJZ2 Importin subunit alpha OS=Mus musculus OX=10090 GN=Kpna6 PE=1 SV=1 Q4FJZ2; Q8BH30 Importin subunit alpha OS=Mus musculus OX=10090 GN=Kpna6 PE=1 SV=1; Importin subunit alpha OS=Mus musculus OX=10090 GN=Kpna6 PE=1 SV=1 0 2 2 0.118 0 1 1 1 624.85992 1248.71257 1248.71999 -5.94 -0.00371 0/0 0 0 3678792.75 HCD 30 MS2 0 415.1 110 52.0117 14249 14249 14244 QEplus033719.raw F4 442.6 351.5 474.2 361.9 438.2 422.2 423 1.78 1 FALSE 0.005733 0.09599 0.018 -250 60079 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDVMIR [K].nDVMIR.[K] N-Term(TMT6plex) 3 Q9CQL1 Protein mago nashi homolog 2 OS=Mus musculus OX=10090 GN=Magohb PE=2 SV=1 Q9CQL1; P61327; A0A023T778 Protein mago nashi homolog 2 OS=Mus musculus OX=10090 GN=Magohb PE=2 SV=1; Protein mago nashi homolog OS=Mus musculus OX=10090 GN=Magoh PE=2 SV=1; Mago nashi protein OS=Mus musculus OX=10090 GN=Magohb PE=1 SV=1 0 2 2 0.2773 0 1 1 1 488.776 976.54473 976.54472 0.01 0 0/0 0 0 10765639 HCD 30 MS2 32.39837 1035.8 110 52.0142 14250 14250 14244 QEplus033719.raw F4 1642.5 773.2 1018.2 672.8 1015.6 1092.3 258 2.2 1 FALSE 0.002326 0.04625 0.153 -250 60084 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMEGAGTDEK [K].aMEGAGTDEk.[T] N-Term(TMT6plex); K10(TMT6plex) 8 P14824; Q99JX6 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3;Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 Q3V2Z4; P14824; F8WIT2; Q3UI56; Q3TUI1; Q8CEX0; Q99JX6; Q3UDK4 Annexin OS=Mus musculus OX=10090 PE=2 SV=1; Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 0 2 2 0.6398 0 1 1 1 733.88269 1466.7581 1466.75612 1.36 0.00099 0/0 0 0 8123294.5 HCD 30 MS2 15.5101 520.2 110 52.0167 14251 14251 14244 QEplus033719.raw F4 633.7 406.6 516.9 436 626.5 501.6 227 3.72 2 FALSE 1.14E-05 3.08E-08 1.524 -250 60087 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADCSNIDK [R].aDcSNIDk.[I] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 4 Q6PEB6 MOB-like protein phocein OS=Mus musculus OX=10090 GN=Mob4 PE=1 SV=1 Q6PEB6; E0CXA9; E0CYJ0; Q3UGM5 MOB-like protein phocein OS=Mus musculus OX=10090 GN=Mob4 PE=1 SV=1; MOB-like protein phocein OS=Mus musculus OX=10090 GN=Mob4 PE=1 SV=1; MOB-like protein phocein (Fragment) OS=Mus musculus OX=10090 GN=Mob4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mob4 PE=2 SV=1 0 2 2 0.5743 0 1 1 1 690.86475 1380.72222 1380.71934 2.09 0.00144 0/0 0 0 3705483.5 HCD 30 MS2 33.94115 407.9 110 52.0192 14252 14252 14244 QEplus033719.raw F4 461.5 333.9 381.3 352.6 496.7 421.4 235 3.03 1 FALSE 1.14E-05 0.0001892 0.804 -250 60106 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGFAGDDAPR [K].aGFAGDDAPR.[A] N-Term(TMT6plex) 36 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q3UAF6; Q3UD81; Q3U122; E9Q1F2; Q3UAA9; F6WX90; A0A1D5RM20; B2RRX1; A0A494B9T3; Q3U5R4; A1E281; Q3UAF7; G3UZ07; P62737; G3UYG0; P68134; Q3UBP6; D3YZY0; E9Q5F4; B1ATY1; P68033; P63260; Q61852; Q3UA89; Q3UGS0; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=4 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 2 2 0.7157 0 1 1 1 603.31067 1205.61406 1205.61122 2.36 0.00142 0/0 0 0 3781475840 HCD 30 MS2 2.351687 485.9 0.369 52.0315 14256 14256 14255 QEplus033719.raw F4 435 422.6 575.7 406.9 528.1 547.2 153 3.13 4 FALSE 1.14E-05 1.25E-05 1.029 -250 60130 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FAVGSGSR [K].fAVGSGSR.[V] N-Term(TMT6plex) 6 Q3U094 Actin-related protein 2/3 complex subunit OS=Mus musculus OX=10090 GN=Arpc1b PE=2 SV=1 Q3U094; Q9WV32; Q3TBA2; Q91Z25; F6VVE6; Q3TCE7 Actin-related protein 2/3 complex subunit OS=Mus musculus OX=10090 GN=Arpc1b PE=2 SV=1; Actin-related protein 2/3 complex subunit 1B OS=Mus musculus OX=10090 GN=Arpc1b PE=1 SV=4; Actin-related protein 2/3 complex subunit OS=Mus musculus OX=10090 GN=Arpc1b PE=2 SV=1; Actin-related protein 2/3 complex subunit OS=Mus musculus OX=10090 GN=Arpc1b PE=1 SV=1; Actin-related protein 2/3 complex subunit 1B (Fragment) OS=Mus musculus OX=10090 GN=Arpc1b PE=1 SV=1; Actin-related protein 2/3 complex subunit OS=Mus musculus OX=10090 GN=Arpc1b PE=2 SV=1 0 2 2 0.3352 0 1 1 1 505.28397 1009.56066 1009.56281 -2.13 -0.00108 0/0 0 0 13451969 HCD 30 MS2 33.06165 1405.5 110 52.0388 14259 14259 14255 QEplus033719.raw F4 1862.4 1055.6 1408 1161.3 1333.2 1612.4 165 1.76 1 FALSE 0.0002419 0.004867 0.504 -250 60148 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQHPNIVTVR [K].aQHPNIVTVR.[E] N-Term(TMT6plex) 4 Q8R190 Cdc2l1 protein (Fragment) OS=Mus musculus OX=10090 GN=Cdk11b PE=2 SV=1 Q8R190; P24788-2; A2A9P6; P24788 Cdc2l1 protein (Fragment) OS=Mus musculus OX=10090 GN=Cdk11b PE=2 SV=1; Isoform 2 of Cyclin-dependent kinase 11B OS=Mus musculus OX=10090 GN=Cdk11b; Cyclin-dependent kinase 11B OS=Mus musculus OX=10090 GN=Cdk11b PE=1 SV=1; Cyclin-dependent kinase 11B OS=Mus musculus OX=10090 GN=Cdk11b PE=1 SV=2 0 3 3 0.3977 0 1 1 1 455.27194 1363.80127 1363.80075 0.38 0.00017 0/0 0 0 4794237.5 HCD 30 MS2 47.84232 433.4 110 52.0438 14261 14261 14255 QEplus033719.raw F4 460.4 286.1 389.3 537.1 435.4 492.4 480 3.42 1 FALSE 1.14E-05 0.0008195 0.68 -250 60165 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LREDLER [K].lREDLER.[L] N-Term(TMT6plex) 4 Q561N5 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1 Q561N5; Q3TW65; F6YVP7; A0A1Y7VKY1 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps6 PE=3 SV=2; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps5 PE=3 SV=1 1 3 3 0.2768 0 1 1 1 387.22595 1159.6633 1159.66325 0.04 0.00002 0/0 0 0 8858411 HCD 30 MS2 38.8763 598.7 110 52.0536 14264 14264 14263 QEplus033719.raw F4 592.9 470.3 697 506.5 598.2 727.1 305 2.71 1 FALSE 0.002611 0.05166 0.137 -250 60190 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAGVQIAGR [K].eAGVQIAGR.[H] N-Term(TMT6plex) 5 Q3TW74 "C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1" Q8BY49; Q8BXX7; Q3UZH3; Q3TW74; Q922D8 "Methenyltetrahydrofolate cyclohydrolase (Fragment) OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=2; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=1 SV=4" 0 2 2 0.427 0 1 1 1 565.33075 1129.65422 1129.65269 1.36 0.00077 0/0 0 0 12836108 HCD 30 MS2 26.70774 871.3 100.111 52.0608 14267 14267 14263 QEplus033719.raw F4 904.3 843.3 956.6 645.7 999.3 878.7 276 2.67 1 FALSE 1.14E-05 3.71E-05 0.939 -250 60199 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVITLSQR [R].hVITLSQR.[G] N-Term(TMT6plex) 5 O70583 E3 ubiquitin-protein ligase Midline-1 OS=Mus musculus OX=10090 GN=Mid1 PE=1 SV=2 O70583-3; O70583; O70583-2; Q3UXC7; B1AV01 Isoform 3 of E3 ubiquitin-protein ligase Midline-1 OS=Mus musculus OX=10090 GN=Mid1; E3 ubiquitin-protein ligase Midline-1 OS=Mus musculus OX=10090 GN=Mid1 PE=1 SV=2; Isoform 2 of E3 ubiquitin-protein ligase Midline-1 OS=Mus musculus OX=10090 GN=Mid1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Mid1 PE=2 SV=1; E3 ubiquitin-protein ligase Midline-1 OS=Mus musculus OX=10090 GN=Mid1 PE=1 SV=1 0 3 3 0.2982 0 1 1 1 394.91061 1182.71729 1182.71562 1.41 0.00056 0/0 0 0 7115989 HCD 30 MS2 49.7903 755.7 110 52.0632 14268 14268 14263 QEplus033719.raw F4 721.4 635.7 853.6 608 882.8 832.4 191 2.85 1 FALSE 0.001134 0.01503 0.332 -250 60209 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLAGSQIR [R].tLAGSQIR.[N] N-Term(TMT6plex) 4 Q9ES55 Aldehyde oxidase OS=Mus musculus OX=10090 GN=Aox4 PE=2 SV=1 Q9ES55; Q8R387; G3X8P9; O54754 Aldehyde oxidase OS=Mus musculus OX=10090 GN=Aox4 PE=2 SV=1; Aldehyde oxidase 1 OS=Mus musculus OX=10090 GN=Aox1 PE=2 SV=1; Aldehyde oxidase 1 OS=Mus musculus OX=10090 GN=Aox1 PE=1 SV=1; Aldehyde oxidase 1 OS=Mus musculus OX=10090 GN=Aox1 PE=1 SV=2 0 2 2 0.289 0 1 1 1 537.82941 1074.65154 1074.64687 4.34 0.00233 0/0 0 0 4202685 HCD 30 MS2 11.85205 680.9 110 52.0657 14269 14269 14263 QEplus033719.raw F4 700.5 697 718 488.1 778.9 702.8 167 2.63 1 FALSE 0.002688 0.05349 0.132 -250 60227 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAEGAGTEEEGTPK [K].kAEGAGTEEEGTPk.[E] N-Term(TMT6plex); K1(TMT6plex); K14(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 1 4 4 0.6784 0 1 1 1 523.54431 2091.15542 2091.15367 0.83 0.00044 0/0 0 0 56587216 HCD 30 MS2 28.01897 563.1 23.11 52.0703 14271 14271 14263 QEplus033719.raw F4 536.3 545 655.6 446.6 608.8 586.2 497 4.85 1 FALSE 1.14E-05 9.25E-10 1.813 -250 60232 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLAEDEAFQRR [R].rLAEDEAFQRR.[R] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 2 3 3 0.4242 0 1 1 1 540.63232 1619.88242 1619.88152 0.56 0.0003 0/0 0 0 6665087.5 HCD 30 MS2 20.91384 394.6 110 52.0727 14272 14272 14263 QEplus033719.raw F4 392 320.3 444.3 326.2 388.5 496.1 434 3.63 2 FALSE 1.14E-05 0.0001978 0.8 -250 60237 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGATPAEDDEDK [K].kGATPAEDDEDk.[D] N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex) 12 Q91VK2; Q80T06 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1;Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1 Q91VK2; P57776-2; F6ZFU0; Q80T06; A0A0R4J1E2; D3YY68; E9QN08; A0A0R4J1L2; D3YZT9; P57776-3; P57776; D3YUQ9 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 2 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 3 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=3; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=8 1 3 3 0.7771 0 1 1 1 655.02582 1963.0629 1963.05871 2.13 0.0014 0/0 0 0 3574240.5 HCD 30 MS2 19.55627 364.5 110 52.0753 14273 14273 14263 QEplus033719.raw F4 402 261.8 361.5 342 422.3 397.6 426 4.89 2 FALSE 1.14E-05 1.91E-11 2.133 -250 60241 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVQGPPGPAGPR [R].gVQGPPGPAGPR.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 2 2 0.746 0 1 1 1 659.875 1318.74272 1318.7429 -0.13 -0.00009 0/0 0 0 65352932 HCD 30 MS2 7.095098 578.4 28.591 52.0826 14275 14275 14274 QEplus033719.raw F4 521.8 549.7 707.2 355.9 718.8 617 397 3.78 1 FALSE 1.14E-05 1.26E-09 1.788 -250 60248 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHVLLGR [R].eHVLLGR.[A] N-Term(TMT6plex) 6 S4R2U9 Rho guanine nucleotide exchange factor 40 OS=Mus musculus OX=10090 GN=Arhgef40 PE=1 SV=1 Q3UPH7-6; S4R2U9; S4R189; Q3UPH7-3; Q3UPH7-2; Q3UPH7 Isoform 6 of Rho guanine nucleotide exchange factor 40 OS=Mus musculus OX=10090 GN=Arhgef40; Rho guanine nucleotide exchange factor 40 OS=Mus musculus OX=10090 GN=Arhgef40 PE=1 SV=1; Rho guanine nucleotide exchange factor 40 OS=Mus musculus OX=10090 GN=Arhgef40 PE=1 SV=1; Isoform 3 of Rho guanine nucleotide exchange factor 40 OS=Mus musculus OX=10090 GN=Arhgef40; Isoform 2 of Rho guanine nucleotide exchange factor 40 OS=Mus musculus OX=10090 GN=Arhgef40; Rho guanine nucleotide exchange factor 40 OS=Mus musculus OX=10090 GN=Arhgef40 PE=1 SV=1 0 3 3 0.3578 0 1 1 1 351.55148 1052.6399 1052.64139 -1.42 -0.0005 0/0 0 0 718255.4375 HCD 30 MS2 65.63474 224.5 110 52.0851 14276 14276 14274 QEplus033719.raw F4 209.2 180.6 239.3 181.7 273.5 262.8 65 2.04 1 FALSE 0.00484 0.08479 0.049 -250 60265 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAEVESSQPLRNPQR [R].gAEVESSQPLRNPQR.[K] N-Term(TMT6plex) 9 B9EKB8 Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1 Q8C6V9; Q7TMR1; Q8K0J1; Q8C2F9; B9EKB8; Q80VF2; B7ZWC4; Q4L138; Q07113 Fibronectin type-II domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Igf2r protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Igf2r protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Fibronectin type-II domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Igf2r protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Insulin-like growth factor 2 receptor (Fragment) OS=Mus musculus molossinus OX=57486 GN=Igf2r PE=2 SV=1; Cation-independent mannose-6-phosphate receptor OS=Mus musculus OX=10090 GN=Igf2r PE=1 SV=1 1 3 3 0.5773 0 1 1 1 633.00836 1897.01053 1897.0089 0.86 0.00054 0/0 0 0 4341050 HCD 30 MS2 25.06595 443.2 110 52.0901 14278 14278 14274 QEplus033719.raw F4 487.3 362.6 500 410.5 429 469.7 394 3.62 1 FALSE 1.14E-05 3.75E-08 1.508 -250 60272 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPTEVSDK [K].gPTEVSDk.[K] N-Term(TMT6plex); K8(TMT6plex) 1 Q91WE4 UPF0729 protein C18orf32 homolog OS=Mus musculus OX=10090 PE=3 SV=1 Q91WE4 UPF0729 protein C18orf32 homolog OS=Mus musculus OX=10090 PE=3 SV=1 0 2 2 0.3055 0 1 1 1 645.86987 1290.73247 1290.73055 1.49 0.00096 0/0 0 0 7679184.5 HCD 30 MS2 10.55812 586.6 110 52.0926 14279 14279 14274 QEplus033719.raw F4 616.2 423.5 624.1 581.8 644.4 629.4 422 2.75 1 FALSE 0.0002814 0.00555 0.488 -250 60293 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IEGDETSTEAATR [R].iEGDETSTEAATR.[L] N-Term(TMT6plex) 3 Q923G2 "DNA-directed RNA polymerases I, II, and III subunit RPABC3 OS=Mus musculus OX=10090 GN=Polr2h PE=1 SV=3" A0A338P6B4; A0A338P6I2; Q923G2 "DNA-directed RNA polymerases I, II, and III subunit RPABC3 (Fragment) OS=Mus musculus OX=10090 GN=Polr2h PE=1 SV=1; DNA-directed RNA polymerases I, II, and III subunit RPABC3 OS=Mus musculus OX=10090 GN=Polr2h PE=1 SV=1; DNA-directed RNA polymerases I, II, and III subunit RPABC3 OS=Mus musculus OX=10090 GN=Polr2h PE=1 SV=3" 0 2 2 0.7479 0 1 1 1 804.89948 1608.79167 1608.79142 0.15 0.00012 0/0 0 0 2346657.75 HCD 30 MS2 0 156.3 110 52.1001 14282 14282 14274 QEplus033719.raw F4 152.5 155.2 165.5 119 178.9 166.7 119 3.53 1 FALSE 1.14E-05 1.19E-08 1.603 -250 60297 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RIHELEK [K].rIHELEk.[I] N-Term(TMT6plex); K7(TMT6plex) 5 Q5SX40 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1 Q9ESW6; Q5SX40; G3UW82; B2RWX0; I6L963 "Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1" 1 3 3 0.2668 0 1 1 1 461.62216 1382.85193 1382.852 -0.05 -0.00002 0/0 0 0 22861780 HCD 30 MS2 21.50221 776.3 56.279 52.1175 14286 14286 14285 QEplus033719.raw F4 914.1 267.4 475.2 1470.3 493.1 1037.9 226 3.71 1 FALSE 0.001134 0.01503 0.332 -250 60313 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVHVGGVVR [K].tVHVGGVVR.[S] N-Term(TMT6plex) 4 Q3TIJ5 Ribosome biogenesis protein BOP1 OS=Mus musculus OX=10090 GN=Bop1 PE=2 SV=1 Q3TIJ5; Q3THV0; P97452; Q3TJZ5 Ribosome biogenesis protein BOP1 OS=Mus musculus OX=10090 GN=Bop1 PE=2 SV=1; Ribosome biogenesis protein BOP1 OS=Mus musculus OX=10090 GN=Bop1 PE=2 SV=1; Ribosome biogenesis protein BOP1 OS=Mus musculus OX=10090 GN=Bop1 PE=1 SV=1; Ribosome biogenesis protein BOP1 OS=Mus musculus OX=10090 GN=Bop1 PE=2 SV=1 0 3 3 0.355 0 1 1 1 384.9075 1152.70795 1152.70506 2.51 0.00096 0/0 0 0 5013475 HCD 30 MS2 69.22462 282.7 110 52.1225 14288 14288 14285 QEplus033719.raw F4 346.1 185.4 275 213.7 309.7 366.5 188 3.07 1 FALSE 0.001607 0.02529 0.243 -250 60322 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSTQEYAAK [K].tSTQEYAAk.[I] N-Term(TMT6plex); K9(TMT6plex) 5 Q923T9 Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Mus musculus OX=10090 GN=Camk2g PE=1 SV=1 Q8BW40; Q923T9; Q923T9-2; Q6ZWS7; A0A2I3BQP6 Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Camk2g PE=2 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Mus musculus OX=10090 GN=Camk2g PE=1 SV=1; Isoform 2 of Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Mus musculus OX=10090 GN=Camk2g; Calcium/calmodulin-dependent protein kinase OS=Mus musculus OX=10090 GN=Camk2g PE=2 SV=1; Calcium/calmodulin-dependent protein kinase OS=Mus musculus OX=10090 GN=Camk2g PE=1 SV=1 0 2 2 0.5422 0 1 1 1 728.90497 1456.80266 1456.80478 -1.46 -0.00106 0/0 0 0 4883213 HCD 30 MS2 16.46532 433.1 110 52.125 14289 14289 14285 QEplus033719.raw F4 473.4 275.3 427.4 501.4 390.5 530.5 331 3.08 1 FALSE 1.14E-05 4.12E-06 1.121 -250 60334 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFNDGTDEKK [K].rFNDGTDEkk.[K] N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 2 4 4 0.5 0 1 1 1 475.02475 1897.07717 1897.07464 1.34 0.00063 0/0 0 0 6141390.5 HCD 30 MS2 69.3802 110 52.1297 14291 14291 14285 QEplus033719.raw F4 397 3.24 1 FALSE 0.0006294 0.009513 0.412 -250 60340 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELAEDEPSTDR [R].eLAEDEPSTDR.[S] N-Term(TMT6plex) 4 Q3UMU9 Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2 PE=1 SV=1 Q3UMU9-4; Q3UMU9-3; Q3UMU9-2; Q3UMU9 Isoform 4 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Isoform 3 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Isoform 2 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2 PE=1 SV=1 0 2 2 0.6081 0 1 1 1 745.86353 1490.71977 1490.7172 1.73 0.00129 0/0 0 0 5269355 HCD 30 MS2 0 262.8 110 52.1323 14292 14292 14285 QEplus033719.raw F4 251.8 257.2 287.4 202.1 316.2 262 86 3.7 1 FALSE 1.14E-05 2.73E-09 1.724 -250 60347 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THKWEQK [K].tHkWEQk.[E] N-Term(TMT6plex); K3(TMT6plex); K7(TMT6plex) 5 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q8CD09; Q9ERG0; Q8C7S2; Q8C3R7; Q8BT15 LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 1 4 4 0.2986 0 1 1 1 411.75159 1643.98452 1643.98364 0.54 0.00022 0/0 0 0 5057459 HCD 30 MS2 72.08834 429.1 110 52.1347 14293 14293 14285 QEplus033719.raw F4 543.3 338.1 473 311.4 533.4 375.2 399 2.88 1 FALSE 0.001028 0.01333 0.354 -250 60385 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMEGAGTDEK [K].aMEGAGTDEk.[T] N-Term(TMT6plex); K10(TMT6plex) 8 P14824; Q99JX6 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3;Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 Q3V2Z4; P14824; F8WIT2; Q3UI56; Q3TUI1; Q8CEX0; Q99JX6; Q3UDK4 Annexin OS=Mus musculus OX=10090 PE=2 SV=1; Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 0 3 3 0.6758 0 1 1 1 489.59039 1466.75663 1466.75612 0.35 0.00017 0/0 0 0 32770432 HCD 30 MS2 23.91713 656.9 37.78 52.1519 14299 14299 14296 QEplus033719.raw F4 739.9 498.2 679 534.6 806.4 683.4 225 3.64 2 FALSE 1.14E-05 0.0002769 0.772 -250 60391 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISCGGAIR [R].iScGGAIR.[S] N-Term(TMT6plex); C3(Carbamidomethyl) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.4864 0 1 1 1 531.80084 1062.59441 1062.59273 1.58 0.00084 0/0 0 0 11143569 HCD 30 MS2 0 686.5 110 52.1566 14301 14301 14296 QEplus033719.raw F4 948.8 234.4 520.5 1110.5 335.4 969.3 266 2.94 2 FALSE 3.35E-05 0.001257 0.642 -250 60400 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRWQGEEVPR [K].sRWQGEEVPR.[S] N-Term(TMT6plex) 5 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q8CD09; Q9ERG0; Q8C7S2; Q8C3R7; Q8BT15 LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 1 3 3 0.434 0 1 1 1 491.59888 1472.78208 1472.78074 0.91 0.00045 0/0 0 0 6601214 HCD 30 MS2 56.56965 833.5 110 52.1591 14302 14302 14296 QEplus033719.raw F4 1042.9 613.6 883 691.8 833.7 936 257 3.41 1 FALSE 0.0005076 0.008056 0.438 -250 60416 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGVSMGTPK [K].rGVSMGTPk.[L] N-Term(TMT6plex); K9(TMT6plex) 6 B9EKB8 Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1 Q8C6V9; Q8K0J1; Q8C2F9; B9EKB8; B7ZWC4; Q07113 Fibronectin type-II domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Igf2r protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Fibronectin type-II domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Cation-independent mannose-6-phosphate receptor OS=Mus musculus OX=10090 GN=Igf2r PE=1 SV=1 1 3 3 0.3768 0 1 1 1 464.27951 1390.82398 1390.82408 -0.07 -0.00003 0/0 0 0 13445631 HCD 30 MS2 59.76935 1037.7 110 52.1641 14304 14304 14296 QEplus033719.raw F4 1088.7 835.7 1119.6 837.4 1136.4 1208.7 466 3.45 1 FALSE 1.14E-05 0.0002293 0.788 -250 60426 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLEEENK [R].qLEEENk.[A] N-Term(TMT6plex); K7(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 0 2 2 0.5143 0 1 1 1 674.38196 1347.75664 1347.75202 3.43 0.00231 0/0 0 0 11335586 HCD 30 MS2 0 412.6 110 52.1666 14305 14305 14296 QEplus033719.raw F4 528.4 154.3 319.7 813.9 229.1 429.9 436 2.8 1 FALSE 0.000262 0.005258 0.495 -250 60436 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGFAGDDAPR [K].aGFAGDDAPR.[A] N-Term(TMT6plex) 36 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q3UAF6; Q3UD81; Q3U122; E9Q1F2; Q3UAA9; F6WX90; A0A1D5RM20; B2RRX1; A0A494B9T3; Q3U5R4; A1E281; Q3UAF7; G3UZ07; P62737; G3UYG0; P68134; Q3UBP6; D3YZY0; E9Q5F4; B1ATY1; P68033; P63260; Q61852; Q3UA89; Q3UGS0; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=4 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 3 3 0.767 0 1 1 1 402.54211 1205.61179 1205.61122 0.48 0.00019 0/0 0 0 181435584 HCD 30 MS2 32.07517 334 6.236 52.1764 14308 14308 14307 QEplus033719.raw F4 392.6 319.2 377.8 264.4 378 272.1 146 3.39 4 FALSE 1.14E-05 0.0006804 0.696 -250 60444 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLESTQTESNK [K].qLESTQTESNk.[K] N-Term(TMT6plex); K11(TMT6plex) 1 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 0 3 3 0.6258 0 1 1 1 574.98077 1722.92777 1722.92741 0.21 0.00012 0/0 0 0 12735902 HCD 30 MS2 28.5758 677.5 110 52.1789 14309 14309 14307 QEplus033719.raw F4 810.4 470.4 728.8 692.5 612 750.9 351 4.65 1 FALSE 1.14E-05 3.46E-05 0.945 -250 60452 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLQQER [R].lLQQER.[E] N-Term(TMT6plex) 2 Q9D0I9 "Arginine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Rars1 PE=1 SV=2" Q3TVC5; Q9D0I9 "Arginine--tRNA ligase, cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Rars PE=2 SV=1; Arginine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Rars1 PE=1 SV=2" 0 2 2 0.1429 0 1 1 1 508.3089 1015.61052 1015.60976 0.75 0.00038 0/0 0 0 66834488 HCD 30 MS2 14.65347 684.6 21.815 52.1812 14310 14310 14307 QEplus033719.raw F4 681.5 553.4 749.8 602.1 692.1 829 195 2.45 1 FALSE 0.004964 0.08658 0.044 -250 60462 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAICSGK [R].aAIcSGk.[V] N-Term(TMT6plex); C4(Carbamidomethyl); K7(TMT6plex) 6 A0A0A0MQF6 Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 Q2VWQ4; A0A0A0MQF6; S4R1N5; P16858; S4R1W1; Q4VBD1 GAPDH (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=2 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=2; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm3839 PE=1 SV=1; Gapdh protein OS=Mus musculus OX=10090 GN=Gapdh PE=2 SV=1 0 2 2 0.5972 0 1 1 1 582.84589 1164.6845 1164.6811 2.92 0.0017 0/0 0 0 18104054 HCD 30 MS2 4.666056 1485.3 110 52.1837 14311 14311 14307 QEplus033719.raw F4 2221.1 1057.5 1722.6 1578 905.6 1426.7 235 2.88 1 FALSE 0.0003408 0.006513 0.468 -250 60480 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMAPGAGCSPGEPR [R].nMAPGAGcSPGEPR.[E] N-Term(TMT6plex); C8(Carbamidomethyl) 3 P58871 182 kDa tankyrase-1-binding protein OS=Mus musculus OX=10090 GN=Tnks1bp1 PE=1 SV=2 Z4YJL4; P58871; B9EKJ7 182 kDa tankyrase-1-binding protein OS=Mus musculus OX=10090 GN=Tnks1bp1 PE=1 SV=1; 182 kDa tankyrase-1-binding protein OS=Mus musculus OX=10090 GN=Tnks1bp1 PE=1 SV=2; Tankyrase 1 binding protein 1 OS=Mus musculus OX=10090 GN=Tnks1bp1 PE=2 SV=1 0 2 2 0.8314 0 1 1 1 815.38904 1629.7708 1629.76748 2.04 0.00166 0/0 0 0 5628733.5 HCD 30 MS2 0 149.3 110 52.1887 14313 14313 14307 QEplus033719.raw F4 150.8 152.1 159.2 116.4 181.7 135.7 64 4.33 1 FALSE 1.14E-05 7.58E-11 2.02 -250 60492 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEGTPNDPNPNDPR [R].vEGTPNDPNPNDPR.[A] N-Term(TMT6plex) 2 Q3UNC0 NTP_transferase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gmppa PE=2 SV=1 Q3UNC0; Q922H4 NTP_transferase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gmppa PE=2 SV=1; Mannose-1-phosphate guanyltransferase alpha OS=Mus musculus OX=10090 GN=Gmppa PE=1 SV=1 0 2 2 0.7275 0 1 1 1 875.93292 1750.85857 1750.85576 1.61 0.00141 0/0 0 0 2094879.625 HCD 30 MS2 0 65.3 110 52.1938 14315 14315 14307 QEplus033719.raw F4 64.6 57.4 70.1 50.1 75.4 74.2 133 3.89 1 FALSE 1.14E-05 3.60E-06 1.132 -250 60496 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVLAESAR [R].nVLAESAR.[I] N-Term(TMT6plex) 2 Q9D172 "Glutamine amidotransferase-like class 1 domain-containing protein 3A, mitochondrial OS=Mus musculus OX=10090 GN=Gatd3a PE=1 SV=1" Q9D172; A0A1W2P7B6 "Glutamine amidotransferase-like class 1 domain-containing protein 3A, mitochondrial OS=Mus musculus OX=10090 GN=Gatd3a PE=1 SV=1; Glutamine amidotransferase-like class 1 domain-containing protein 3A, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Gatd3a PE=1 SV=1" 0 2 2 0.5593 0 1 1 1 544.81714 1088.627 1088.62614 0.79 0.00043 0/0 0 0 30558164 HCD 30 MS2 57.32471 532.1 19.38 52.196 14316 14316 14307 QEplus033719.raw F4 533.6 376 547.9 576.1 532 627.3 360 2.36 1 FALSE 0.0002119 0.004452 0.515 -250 60510 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SISPDVR [R].sISPDVR.[S] N-Term(TMT6plex) 15 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WS99; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.4473 0 1 1 1 501.79312 1002.57897 1002.57813 0.84 0.00042 0/0 0 0 218621104 HCD 30 MS2 2.800025 419.8 5.379 52.2058 14319 14319 14318 QEplus033719.raw F4 361.4 361.2 493.7 540.6 268 494.1 273 2.37 3 FALSE 0.0003996 0.007243 0.453 -250 60523 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAHYNK [R].lAHYNk.[R] N-Term(TMT6plex); K6(TMT6plex) 18 Q64475; Q64525 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3;Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64475; Q8CGP2; Q64525; Q64524; Q8CGP1; P10854; A0JNS9; Q64478; Q8C622; P70696; Q9D2U9; Q8CGP2-2; Q8CBB6; Q6ZWY9; Q8CGP0; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 2-E OS=Mus musculus OX=10090 GN=H2bc21 PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone domain-containing protein OS=Mus musculus OX=10090 GN=H2bc22 PE=2 SV=1; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Histone H2B type 3-A OS=Mus musculus OX=10090 GN=Hist3h2ba PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3; Histone H2B type 3-B OS=Mus musculus OX=10090 GN=H2bu1 PE=1 SV=3; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 0 3 3 0.4152 0 1 1 1 401.91354 1203.72608 1203.72501 0.88 0.00035 0/0 0 0 187411120 HCD 30 MS2 8.493608 444.3 5.62 52.2105 14321 14321 14318 QEplus033719.raw F4 507.3 446.1 497 369.4 524.2 322 518 2.89 2 FALSE 0.0007246 0.01046 0.397 -250 60533 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEEIGR [-K].mEEIGR.[VI] N-Term(TMT6plex) 8 Q3ULT2; A1BN54; Q7TPR4 Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1;Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1;Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 A0A1L1SVJ6; Q99LJ3; A0A1L1SV25; Q3UDJ7; Q3ULT2; A1BN54; Q7TPR4; Q1A602 Alpha-actinin-4 (Fragment) OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Actn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Actn1 PE=2 SV=1; Alpha-actinin-4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1; Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1 0 2 2 0.2249 0 1 1 1 482.2601 963.51293 963.51308 -0.16 -0.00008 0/0 0 0 149643264 HCD 30 MS2 24.21136 686 7.259 52.2128 14322 14322 14318 QEplus033719.raw F4 831.1 624.8 766.4 475 707.9 711.1 173 2.09 3 FALSE 0.006349 0.1025 0 -250 60534 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEELGR [-K].mEELGR.[VI] N-Term(TMT6plex) 2 Q8BPL8; Q9D2Q2 tRNA (uracil-O(2)-)-methyltransferase OS=Mus musculus OX=10090 GN=Trmt44 PE=2 SV=1; Probable tRNA (uracil-O(2)-)-methyltransferase OS=Mus musculus OX=10090 GN=Trmt44 PE=2 SV=2 0 2 2 0.2249 0 1 2 2 482.2601 963.51293 963.51308 -0.16 -0.00008 0/0 0 0 149643264 HCD 30 MS2 24.21136 686 7.259 52.2128 14322 14322 14318 QEplus033719.raw F4 831.1 624.8 766.4 475 707.9 711.1 173 2.09 3 FALSE 0.006349 0.1025 0 -250 60540 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HMQLYCDR [R].hMQLYcDR.[Y] N-Term(TMT6plex); C6(Carbamidomethyl) 2 P49718 DNA replication licensing factor MCM5 OS=Mus musculus OX=10090 GN=Mcm5 PE=1 SV=2 P49718; Q8BQ03 DNA replication licensing factor MCM5 OS=Mus musculus OX=10090 GN=Mcm5 PE=1 SV=2; DNA helicase OS=Mus musculus OX=10090 GN=Mcm5 PE=2 SV=1 0 3 3 0.7757 0 1 1 1 451.21991 1351.64518 1351.64484 0.25 0.00011 0/0 0 0 12328958 HCD 30 MS2 59.65324 693.7 71.519 52.2173 14324 14324 14318 QEplus033719.raw F4 686.8 667.4 727.2 648.8 748.3 683.4 66 2.72 1 FALSE 1.14E-05 0.0004193 0.737 -250 60571 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLESTQTESNK [K].qLESTQTESNk.[K] N-Term(TMT6plex); K11(TMT6plex) 1 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 0 2 2 0.5774 0 1 1 1 861.96893 1722.93059 1722.92741 1.84 0.00159 0/0 0 0 11331237 HCD 30 MS2 0 401.7 110 52.2367 14331 14331 14329 QEplus033719.raw F4 448.8 259 434.3 448.1 329.3 490.5 392 4.78 1 FALSE 1.14E-05 1.44E-10 1.967 -250 60578 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQEALVAR [K].kQEALVAR.[Y] N-Term(TMT6plex); K1(TMT6plex) 11 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" Q3URW8; B9EKJ1; E9Q447; B2RXX6; A3KGU9; Q3V1V5; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 1 3 3 0.3907 0 1 1 1 458.2941 1372.86774 1372.86765 0.06 0.00003 0/0 0 0 17420814 HCD 30 MS2 56.83772 1221.8 85.814 52.239 14332 14332 14329 QEplus033719.raw F4 1317.7 733.1 1228.6 1136.7 1146.9 1767.7 344 2.15 2 FALSE 0.001591 0.02489 0.245 -250 60596 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TALHGVK [R].tALHGVk.[W] N-Term(TMT6plex); K7(TMT6plex) 11 Q80TU6 MKIAA0670 protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1 Q7TSL7; Q9JIX8; B8JJ91; B8JJ92; Q9JIX8-2; Q9JIX8-4; Q9JIX8-3; F6RJ39; Q52KR6; Q05D19; Q80TU6 Apoptotic chromatin condensation inducer 1 OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1; Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=3; Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Isoform 2 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Isoform 4 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Isoform 3 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Apoptotic chromatin condensation inducer in the nucleus (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Acin1 protein OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Acin1 protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1; MKIAA0670 protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1 0 3 3 0.5574 0 1 1 1 395.2569 1183.75614 1183.75631 -0.15 -0.00006 0/0 0 0 28127412 HCD 30 MS2 34.91965 585.6 42.386 52.2462 14335 14335 14329 QEplus033719.raw F4 629.4 413.5 630.1 490.3 712.9 637.4 153 2.96 1 FALSE 0.001607 0.0252 0.243 -250 60624 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TATPQQAQEVHEK [K].tATPQQAQEVHEk.[L] N-Term(TMT6plex); K13(TMT6plex) 3 P17751 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5 H7BXC3; P17751; P17751-2 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=1; Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5; Isoform 2 of Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 0 3 3 0.7936 0 1 1 1 642.35461 1925.04929 1925.04926 0.02 0.00001 0/0 0 0 121357176 HCD 30 MS2 5.870468 303.1 13.201 52.2636 14341 14341 14340 QEplus033719.raw F4 341.3 194.8 311.2 350.2 264.8 356.2 383 6.25 1 FALSE 1.14E-05 6.31E-16 3.132 -250 60635 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSFQVTR [R].gSFQVTR.[A] N-Term(TMT6plex) 3 P51660 Peroxisomal multifunctional enzyme type 2 OS=Mus musculus OX=10090 GN=Hsd17b4 PE=1 SV=3 P51660; Q3TT11; Q3UHW2 Peroxisomal multifunctional enzyme type 2 OS=Mus musculus OX=10090 GN=Hsd17b4 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsd17b4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsd17b4 PE=2 SV=1 0 2 2 0.32 0 1 1 1 512.29321 1023.57915 1023.57846 0.67 0.00034 0/0 0 0 13221008 HCD 30 MS2 43.11285 853.1 91.675 52.2706 14344 14344 14340 QEplus033719.raw F4 873.2 656.3 938.1 653.6 918.7 1079 74 2 1 FALSE 0.001108 0.01437 0.341 -250 60662 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AITTQNCNTK [K].aITTQNcNTk.[C] N-Term(TMT6plex); C7(Carbamidomethyl); K10(TMT6plex) 5 E9Q3M0 Mothers against decapentaplegic homolog OS=Mus musculus OX=10090 GN=Smad2 PE=1 SV=1 Q62432-2; E9Q3M0; E9Q5P9; Q62432; E9PXA8 Isoform Short of Mothers against decapentaplegic homolog 2 OS=Mus musculus OX=10090 GN=Smad2; Mothers against decapentaplegic homolog OS=Mus musculus OX=10090 GN=Smad2 PE=1 SV=1; Mothers against decapentaplegic homolog 2 (Fragment) OS=Mus musculus OX=10090 GN=Smad2 PE=1 SV=1; Mothers against decapentaplegic homolog 2 OS=Mus musculus OX=10090 GN=Smad2 PE=1 SV=2; Mothers against decapentaplegic homolog 2 (Fragment) OS=Mus musculus OX=10090 GN=Smad2 PE=1 SV=1 0 2 2 0.5799 0 1 1 1 804.93689 1608.8665 1608.87796 -7.12 -0.00573 0/0 0 0 3840996.75 HCD 30 MS2 52.14502 280.7 110 52.2807 14348 14348 14340 QEplus033719.raw F4 275.4 274.3 310.7 204.3 321.3 298 359 2.88 1 FALSE 1.14E-05 2.43E-07 1.354 -250 60677 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LNQEDSDNEK [K].lNQEDSDNEk.[I] N-Term(TMT6plex); K10(TMT6plex) 4 Q5BKS5 Hook homolog 3 (Drosophila) OS=Mus musculus OX=10090 GN=Hook3 PE=2 SV=1 F6W1A2; Q3UUZ6; Q5BKS5; Q8BUK6 Protein Hook homolog 3 (Fragment) OS=Mus musculus OX=10090 GN=Hook3 PE=1 SV=2; HOOK domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hook3 PE=2 SV=1; Hook homolog 3 (Drosophila) OS=Mus musculus OX=10090 GN=Hook3 PE=2 SV=1; Protein Hook homolog 3 OS=Mus musculus OX=10090 GN=Hook3 PE=1 SV=2 0 2 2 0.7769 0 1 1 1 825.42352 1649.83977 1649.83826 0.91 0.00075 0/0 0 0 2925602.75 HCD 30 MS2 0 198.3 110 52.2857 14350 14350 14340 QEplus033719.raw F4 202.5 166.1 214.1 156.8 257.5 193 231 3.99 1 FALSE 1.14E-05 1.18E-08 1.604 -250 60685 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYDDMSPR [R].dYDDMSPR.[R] N-Term(TMT6plex) 13 Q5FWJ5 Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 P61979-3; Q3U9Q3; Q3TUA1; Q5FWJ5; H3BKD0; P61979; H3BLL4; B2M1R6; Q3TG17; Q3U6X2; H3BLP7; Q3TL71; Q3TJ38 Isoform 3 of Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 0 2 2 0.9 0 1 1 1 614.27875 1227.55022 1227.55132 -0.9 -0.00055 0/0 0 0 48029968 HCD 30 MS2 4.60293 606.3 38.72 52.293 14352 14352 14351 QEplus033719.raw F4 585.5 617.4 691.8 469.6 720.2 553.3 14 2.8 1 FALSE 0.00165 0.02689 0.233 -250 60690 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGKGDSTLQVSSR [K].sGkGDSTLQVSSR.[L] N-Term(TMT6plex); K3(TMT6plex) 4 Q80WJ7 Protein LYRIC OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1 F6ZQL0; F6ZSG0; Q80WJ7; F6QHD1 Protein LYRIC (Fragment) OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1; Protein LYRIC (Fragment) OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1; Protein LYRIC OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1; Protein LYRIC (Fragment) OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=2 1 3 3 0.544 0 1 1 1 594.005 1780.00046 1779.9965 2.23 0.00132 0/0 0 0 23518098 HCD 30 MS2 22.47897 941.1 76.26 52.2953 14353 14353 14351 QEplus033719.raw F4 873.9 849.8 1088.5 861.8 908 1064.6 424 3.86 1 FALSE 1.14E-05 2.42E-08 1.544 -250 60697 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESFEGSVR [K].eSFEGSVR.[A] N-Term(TMT6plex) 6 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 2 2 0.6591 0 1 1 1 570.29779 1139.5883 1139.58942 -0.98 -0.00056 0/0 0 0 149741712 HCD 30 MS2 23.72638 600.3 7.257 52.2975 14354 14354 14351 QEplus033719.raw F4 606.3 670.8 666 378.1 752.5 528.2 100 3.08 1 FALSE 0.0002419 0.004924 0.503 -250 60706 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEITGEVR [K].gEITGEVR.[M] N-Term(TMT6plex) 7 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; I7HPX4; B7FAV1; F6Z2C0; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=4 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=8; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.3062 0 1 1 1 545.30823 1089.60918 1089.61015 -0.9 -0.00049 0/0 0 0 36269616 HCD 30 MS2 33.90766 749.3 27.912 52.302 14356 14356 14351 QEplus033719.raw F4 857.3 417.4 727.6 758.5 604.6 1130.4 258 2.58 1 FALSE 4.43E-05 0.001661 0.616 -250 60707 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GELTGEVR [K].gELTGEVR.[M] N-Term(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.3062 0 1 2 2 545.30823 1089.60918 1089.61015 -0.9 -0.00049 0/0 0 0 36269616 HCD 30 MS2 33.90766 749.3 27.912 52.302 14356 14356 14351 QEplus033719.raw F4 857.3 417.4 727.6 758.5 604.6 1130.4 258 2.58 1 FALSE 4.43E-05 0.001661 0.616 -250 60722 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQLAVCQQR [K].tQLAVcQQR.[T] N-Term(TMT6plex); C6(Carbamidomethyl) 1 P30416 Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=5 P30416 Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=5 0 2 2 0.4205 0 1 1 1 666.86591 1332.72453 1332.72553 -0.75 -0.0005 0/0 0 0 8275619.5 HCD 30 MS2 34.17784 536.9 110 52.3068 14358 14358 14351 QEplus033719.raw F4 614.6 444.4 564.4 435 681.9 480.8 307 2.83 1 FALSE 1.14E-05 3.03E-05 0.956 -250 60735 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQQLGDQGK [R].aQQLGDQGk.[T] N-Term(TMT6plex); K9(TMT6plex) 1 Q7TSV4 Phosphoglucomutase-2 OS=Mus musculus OX=10090 GN=Pgm2 PE=1 SV=1 Q7TSV4 Phosphoglucomutase-2 OS=Mus musculus OX=10090 GN=Pgm2 PE=1 SV=1 0 2 2 0.4421 0 1 1 1 701.90826 1402.80925 1402.80545 2.71 0.0019 0/0 0 0 4915751 HCD 30 MS2 20.6521 323.5 110 52.3116 14360 14360 14351 QEplus033719.raw F4 347.1 296 324 257.7 419.7 296.6 413 2.33 1 FALSE 1.14E-05 1.12E-05 1.038 -250 60743 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CAPGYYGNPSQGQPCHR [R].cAPGYYGNPSQGQPcHR.[D] N-Term(TMT6plex); C1(Carbamidomethyl); C15(Carbamidomethyl) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 3 3 0.8228 0 1 1 1 726.66321 2177.97507 2177.98066 -2.56 -0.00186 0/0 0 0 4619401 HCD 30 MS2 0 154.8 110 52.3141 14361 14361 14351 QEplus033719.raw F4 175.8 108 167.4 132.8 168.2 176.8 35 5.7 2 FALSE 1.14E-05 2.94E-13 2.478 -250 60751 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGDVVK [RK].eGDVVk.[IR] N-Term(TMT6plex); K6(TMT6plex) 3 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q60992; Q03265; D3Z6F5 "Guanine nucleotide exchange factor VAV2 OS=Mus musculus OX=10090 GN=Vav2 PE=1 SV=1; ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 0 2 2 0.3093 0 1 1 2 552.83832 1104.66936 1104.6665 2.59 0.00143 0/0 0 0 34286244 HCD 30 MS2 23.92307 908.6 23.484 52.3214 14363 14363 14362 QEplus033719.raw F4 1353.7 568.1 1014.5 911.7 642 961.6 306 1.94 1 FALSE 0.005302 0.09049 0.033 -250 60755 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EESLPEEESR [K].eESLPEEESR.[A] N-Term(TMT6plex) 14 O70318 Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2 Q811B2; B6ZHC6; O70318; B6ZHD0; Q80UE5; Q8CGJ6; Q80UE3; A0A1W2P7I4; Q80UE4; A0A1W2P6I5; B6ZHC5; B6ZHC7; Q8C928; Q3UNQ6 Epb4.1l2 protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Epb4.1l2 protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Protein 4.1G OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1 0 2 2 0.6735 0 1 1 1 717.35065 1433.69402 1433.69573 -1.2 -0.00086 0/0 0 0 2753367 HCD 30 MS2 69.30214 183.4 110 52.3239 14364 14364 14362 QEplus033719.raw F4 204.3 178.1 190.6 135.8 209.9 181.6 84 3.43 1 FALSE 1.14E-05 0.0001486 0.824 -250 60757 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQETLRR [K].lQETLRR.[K] N-Term(TMT6plex) 25 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.3345 0 1 1 1 382.23929 1144.70331 1144.69997 2.92 0.00111 0/0 0 0 5915197 HCD 30 MS2 62.11448 418.8 110 52.3264 14365 14365 14362 QEplus033719.raw F4 443.8 369.5 467 361.9 409.7 460.6 258 2.81 2 FALSE 0.001231 0.01662 0.314 -250 60774 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EKQPVAGSEGAQYR [K].ekQPVAGSEGAQYR.[K] N-Term(TMT6plex); K2(TMT6plex) 6 Q3ULB1 Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1 D6RH72; Q99L61; P47226-2; P47226; Q3ULB1; Q921W7 Testin (Fragment) OS=Mus musculus OX=10090 GN=Tes PE=1 SV=2; Testin OS=Mus musculus OX=10090 GN=Tes PE=2 SV=1; Isoform TES1 of Testin OS=Mus musculus OX=10090 GN=Tes; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=2 1 3 3 0.6785 0 1 1 1 660.03094 1978.07828 1978.07581 1.25 0.00082 0/0 0 0 12332872 HCD 30 MS2 55.46424 110 52.3312 14367 14367 14362 QEplus033719.raw F4 457 4.23 1 FALSE 1.14E-05 6.87E-11 2.028 -250 60779 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCCSCCPVGCSK [K].sccSccPVGcSk.[C] N-Term(TMT6plex); C2(Carbamidomethyl); C3(Carbamidomethyl); C5(Carbamidomethyl); C6(Carbamidomethyl); C10(Carbamidomethyl); K12(TMT6plex) 1 P02802 Metallothionein-1 OS=Mus musculus OX=10090 GN=Mt1 PE=1 SV=1 P02802 Metallothionein-1 OS=Mus musculus OX=10090 GN=Mt1 PE=1 SV=1 0 2 2 0.8977 0 1 1 1 960.42212 1919.83696 1919.83064 3.29 0.00316 0/0 0 0 4653735.5 HCD 30 MS2 0 159.9 110 52.3338 14368 14368 14362 QEplus033719.raw F4 115.4 175.3 247.3 103.7 141.2 176.6 12 4.69 1 FALSE 1.14E-05 1.81E-09 1.758 -250 60784 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQEEEPQDDTASTSK [K].kQEEEPQDDTASTSk.[T] N-Term(TMT6plex); K1(TMT6plex); K15(TMT6plex) 4 Q9JIK5 Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3 Q6PCP0; Q9JIK5; Q3ULC7; Q9CWZ5 RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=1; Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=2 1 3 3 0.8097 0 1 1 1 794.08813 2380.24985 2380.24467 2.17 0.00173 0/0 0 0 6379816.5 HCD 30 MS2 48.25792 288.8 110 52.3363 14369 14369 14362 QEplus033719.raw F4 289.3 257.3 315.9 190.4 364.4 315.8 385 6.2 1 FALSE 1.14E-05 6.31E-16 3.758 -250 60790 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSGFGK [K].qSGFGk.[D] N-Term(TMT6plex); K6(TMT6plex) 6 Q8K009 Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=2 Q8CIF2; D3Z6B9; Q8R0Y6; Q8K009; Q9CVJ8; Q8BLE0 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l1 PE=2 SV=1; Formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=1; Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l1 PE=1 SV=1; Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=2; Aldedh domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Aldh1l1 PE=2 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh1l1 PE=2 SV=1 0 2 2 0.2526 0 1 1 1 541.32538 1081.64348 1081.64062 2.65 0.00143 0/0 0 0 5685265.5 HCD 30 MS2 0 819.3 110 52.3388 14370 14370 14362 QEplus033719.raw F4 1102.5 634.6 896.6 694.2 796.5 791.7 76 1.94 1 FALSE 0.007869 0.1301 -0.06 -250 60818 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNTTIPTK [K].rNTTIPTk.[Q] N-Term(TMT6plex); K8(TMT6plex) 18 Q3TEK2; B7U582 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1;Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; B7U582; Q3TH04; P63017; Q3TQ13; Q3TB63; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16; P17156 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Mus musculus OX=10090 GN=Hspa2 PE=1 SV=2 1 3 3 0.5139 0 1 1 1 463.62585 1388.86301 1388.86257 0.32 0.00015 0/0 0 0 7481672 HCD 30 MS2 28.33403 849.3 110 52.3511 14374 14374 14373 QEplus033719.raw F4 1021.2 614.3 850.7 656.1 1006.7 946.7 410 3.6 2 FALSE 1.14E-05 0.0002618 0.777 -250 60824 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDELTRK [R].cDELTRk.[M] N-Term(TMT6plex); C1(Carbamidomethyl); K7(TMT6plex) 8 Q5U222 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1 Q9CSD9; Q3UXW3; Q5U222; Q3V0Z8; A1L333; S4R1I6; Q61656; Q8BTS0 Helicase C-terminal domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 1 3 3 0.516 0 1 1 1 460.59573 1379.77265 1379.77171 0.68 0.00031 0/0 0 0 8298839 HCD 30 MS2 57.96629 731.3 110 52.3536 14375 14375 14373 QEplus033719.raw F4 829.1 545.4 719.8 556.2 974.6 762.9 405 2.19 1 FALSE 0.006477 0.1041 -0.005 -250 60832 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCCSCCPVGCSK [K].sccSccPVGcSk.[C] N-Term(TMT6plex); C2(Carbamidomethyl); C3(Carbamidomethyl); C5(Carbamidomethyl); C6(Carbamidomethyl); C10(Carbamidomethyl); K12(TMT6plex) 1 P02802 Metallothionein-1 OS=Mus musculus OX=10090 GN=Mt1 PE=1 SV=1 P02802 Metallothionein-1 OS=Mus musculus OX=10090 GN=Mt1 PE=1 SV=1 0 3 3 0.8815 0 1 1 1 640.6153 1919.83133 1919.83064 0.36 0.00023 0/0 0 0 36149328 HCD 30 MS2 17.84173 762.9 74.471 52.3559 14376 14376 14373 QEplus033719.raw F4 725.5 834.2 1032.1 504.3 742.6 739 13 4.64 1 FALSE 1.14E-05 8.80E-09 1.628 -250 60836 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLQGIR [RK].sLQGIR.[VKS] N-Term(TMT6plex) 4 Q02788 Collagen alpha-2(VI) chain OS=Mus musculus OX=10090 GN=Col6a2 PE=1 SV=3 B9EK84; Q8VEX5; Q02788; D3Z7D5 Olfactory receptor OS=Mus musculus OX=10090 GN=Olfr186 PE=2 SV=1; Olfactory receptor 186 OS=Mus musculus OX=10090 GN=Olfr186 PE=3 SV=1; Collagen alpha-2(VI) chain OS=Mus musculus OX=10090 GN=Col6a2 PE=1 SV=3; Collagen alpha-2(VI) chain OS=Mus musculus OX=10090 GN=Col6a2 PE=1 SV=1 0 2 2 0.1698 0 1 1 3 451.78476 902.56224 902.56208 0.18 0.00008 0/0 0 0 33204850 HCD 30 MS2 42.99726 664.4 34.711 52.3582 14377 14377 14373 QEplus033719.raw F4 793.6 602.2 691.9 479.4 774.1 645.3 102 2.12 1 FALSE 0.004716 0.08299 0.053 -250 60837 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLQGLR [RK].sLQGLR.[VKS] N-Term(TMT6plex) 3 Q80SX8; A0A6Q6QXN1; Q80SX8-3 ATP-dependent DNA helicase PIF1 OS=Mus musculus OX=10090 GN=Pif1 PE=1 SV=2; ATP-dependent DNA helicase PIF1 OS=Mus musculus OX=10090 GN=Pif1 PE=1 SV=1; Isoform 3 of ATP-dependent DNA helicase PIF1 OS=Mus musculus OX=10090 GN=Pif1 0 2 2 0.1698 0 1 2 2 451.78476 902.56224 902.56208 0.18 0.00008 0/0 0 0 33204850 HCD 30 MS2 42.99726 664.4 34.711 52.3582 14377 14377 14373 QEplus033719.raw F4 793.6 602.2 691.9 479.4 774.1 645.3 102 2.12 1 FALSE 0.004716 0.08299 0.053 -250 60853 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAQQELEEQTRR [K].kAQQELEEQTRR.[A] N-Term(TMT6plex); K1(TMT6plex) 2 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 2 3 3 0.632 0 1 1 1 658.70953 1974.11405 1974.11326 0.4 0.00026 0/0 0 0 15094201 HCD 30 MS2 0 650.3 110 52.363 14379 14379 14373 QEplus033719.raw F4 704.5 588.2 724.6 557.8 680.6 646.2 467 4.62 1 FALSE 1.14E-05 1.04E-09 1.804 -250 60883 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QNETADEATTPQAK [K].qNETADEATTPQAk.[K] N-Term(TMT6plex); K14(TMT6plex) 5 A0A286YDA2 Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1 A0A286YDA2; A0A286YDT3; A0A286YDV7; E9Q5C9; E9Q5C9-2 Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 (Fragment) OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Isoform 2 of Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 0 3 3 0.8089 0 1 1 1 654.67859 1962.02121 1962.01802 1.63 0.00106 0/0 0 0 3902182.75 HCD 30 MS2 0 380.2 110 52.373 14383 14383 14373 QEplus033719.raw F4 426.1 326.4 414.5 287.4 423.5 403.4 346 5.18 1 FALSE 1.14E-05 2.41E-11 2.114 -250 60887 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAMAAAK [K].tAMAAAk.[A] N-Term(TMT6plex); K7(TMT6plex) 2 Q3UW40 TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1 Q3UW40; Q8BP67 TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1; 60S ribosomal protein L24 OS=Mus musculus OX=10090 GN=Rpl24 PE=1 SV=2 0 2 2 0.5217 0 1 1 1 561.34131 1121.67534 1121.67529 0.05 0.00003 0/0 0 0 8662611 HCD 30 MS2 58.11286 978.9 110 52.3803 14385 14385 14384 QEplus033719.raw F4 1229.8 714.9 1150.8 791.7 935.4 1050.7 160 2.53 1 FALSE 0.000262 0.005352 0.493 -250 60897 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNVEAIK [K].rNVEAIk.[G] N-Term(TMT6plex); K7(TMT6plex) 4 Q5SX40 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1 Q9ESW6; Q5SX40; B2RWX0; Q3TT35 "Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1" 1 3 3 0.1463 0 1 1 1 429.94354 1287.81607 1287.81489 0.92 0.00039 0/0 0 0 8504152 HCD 30 MS2 47.54274 749.1 110 52.3828 14386 14386 14384 QEplus033719.raw F4 931.2 357.6 616.5 1081.4 532.1 975.7 557 2.87 1 FALSE 0.001038 0.01361 0.351 -250 60916 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGSSVTEAAK [KR].eGSSVTEAAk.[E] N-Term(TMT6plex); K10(TMT6plex) 23 Q9WV92-2 Isoform 2 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 Q9WV92; A7MCX4; Q9WV92-7; A0A286YCT6; A0A3B2WD96; Q9WV92-4; Q9WV92-5; D0VYV7; Q9WV92-3; A0A286YCY1; B6ZHD1; D0VYV6; Q9WV92-2; V6BQR3; Q9WV92-8; A0A286YD84; Q8BT38; A7YY80; A0A286YDY4; A0A5F8MPR1; Q9WV92-6; A0A5F8MPE1; A0A3B2WBE1 Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Epb4.1l3 protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Isoform 7 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Band 4.1-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Isoform 4 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Isoform 5 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Erythrocyte protein band 4.1-like 3 isoform C OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Isoform 3 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Band 4.1-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Erythrocyte protein band 4.1-like 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Isoform 2 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; 60kDa 4.1B MEF cell isoform (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Isoform 8 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Band 4.1-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; 4_1_CTD domain-containing protein OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; 130kDa Protein 4.1B MEF cell isoform OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Band 4.1-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Isoform 6 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Band 4.1-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1 0 2 2 0.5211 0 1 1 1 718.90442 1436.80156 1436.79969 1.3 0.00093 0/0 0 0 6011057.5 HCD 30 MS2 30.74387 477.9 110 52.3878 14388 14388 14384 QEplus033719.raw F4 492 402.5 496.5 375.1 601.8 499.8 427 2.84 1 FALSE 1.14E-05 2.36E-06 1.167 -250 60934 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLGTPTQSGSTPR [R].tLGTPTQSGSTPR.[V] N-Term(TMT6plex) 1 Q8R4R6 Nucleoporin NUP35 OS=Mus musculus OX=10090 GN=Nup35 PE=1 SV=2 Q8R4R6 Nucleoporin NUP35 OS=Mus musculus OX=10090 GN=Nup35 PE=1 SV=2 0 2 2 0.6146 0 1 1 1 766.41748 1531.82768 1531.82775 -0.04 -0.00003 0/0 0 0 3889514 HCD 30 MS2 0 224.9 110 52.3953 14391 14391 14384 QEplus033719.raw F4 230.9 212 259.8 154.3 261.3 231.4 313 4.1 1 FALSE 1.14E-05 2.59E-12 2.298 -250 60944 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPFGTEGR [K].ePFGTEGR.[G] N-Term(TMT6plex) 6 Q790Y8 Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pdx PE=1 SV=1 A3KG36; A0FF38; P97324; Q790Y8; Q3TNL1; G3UWD6 Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=G6pdx PE=1 SV=1; Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pd2 PE=3 SV=1; Glucose-6-phosphate 1-dehydrogenase 2 OS=Mus musculus OX=10090 GN=G6pd2 PE=1 SV=3; Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pdx PE=1 SV=1; Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pdx PE=2 SV=1; Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pd2 PE=1 SV=1 0 2 2 0.5425 0 1 1 1 561.29541 1121.58354 1121.57885 4.18 0.00234 0/0 0 0 8738059 HCD 30 MS2 59.47159 732.2 70.897 52.3976 14392 14392 14384 QEplus033719.raw F4 917.7 546.8 863.6 583.6 701.6 779.8 193 2.12 1 FALSE 0.0002419 0.004884 0.504 -250 60950 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQEEEPQDDTASTSK [K].kQEEEPQDDTASTSk.[T] N-Term(TMT6plex); K1(TMT6plex); K15(TMT6plex) 4 Q9JIK5 Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3 Q6PCP0; Q9JIK5; Q3ULC7; Q9CWZ5 RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=1; Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=2 1 4 4 0.7473 0 1 1 1 595.81744 2380.24795 2380.24467 1.37 0.00082 0/0 0 0 7750526 HCD 30 MS2 24.77416 526.7 110 52.4001 14393 14393 14384 QEplus033719.raw F4 555.1 439.8 591.8 368.4 623.9 581.4 384 4.59 1 FALSE 1.14E-05 3.44E-10 1.895 -250 60988 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DISDVER [K].dISDVER.[L] N-Term(TMT6plex) 3 Q4FK49 Inorganic diphosphatase OS=Mus musculus OX=10090 GN=Ppa1 PE=1 SV=1 Q8BTY3; Q3UA53; Q4FK49 Inorganic diphosphatase OS=Mus musculus OX=10090 GN=Ppa1 PE=2 SV=1; Inorganic diphosphatase OS=Mus musculus OX=10090 GN=Ppa1 PE=2 SV=1; Inorganic diphosphatase OS=Mus musculus OX=10090 GN=Ppa1 PE=1 SV=1 0 2 2 0.3346 0 1 1 1 531.78552 1062.56377 1062.56287 0.85 0.00045 0/0 0 0 20897976 HCD 30 MS2 0 775.3 55.963 52.4169 14399 14399 14395 QEplus033719.raw F4 896 658.3 788.1 655.9 844.5 808.8 222 2.54 1 FALSE 0.000565 0.008639 0.428 -250 60995 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NGLGPSK [K].nGLGPSk.[T] N-Term(TMT6plex); K7(TMT6plex) 14 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.25 0 1 1 1 565.85114 1130.69499 1130.69338 1.43 0.00081 0/0 0 0 17102432 HCD 30 MS2 43.70881 1390.4 110 52.4194 14400 14400 14395 QEplus033719.raw F4 1670.5 1135.8 1519.7 1527.4 1199.1 1289.9 284 2.04 3 FALSE 0.0003496 0.006647 0.465 -250 61005 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YCADCEAK [K].ycADcEAk.[G] N-Term(TMT6plex); C2(Carbamidomethyl); C5(Carbamidomethyl); K8(TMT6plex) 1 Q91VZ6 Stromal membrane-associated protein 1 OS=Mus musculus OX=10090 GN=Smap1 PE=1 SV=1 Q91VZ6 Stromal membrane-associated protein 1 OS=Mus musculus OX=10090 GN=Smap1 PE=1 SV=1 0 2 2 0.5583 0 1 1 1 737.85791 1474.70854 1474.70706 1.01 0.00074 0/0 0 0 5730847.5 HCD 30 MS2 0 393.4 110 52.4219 14401 14401 14395 QEplus033719.raw F4 422.1 334.7 417.4 317.3 485.8 383.2 72 3.6 1 FALSE 1.14E-05 0.000598 0.707 -250 61012 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEDNEIHC [K].vEDNEIHc.[-] N-Term(TMT6plex); C8(Carbamidomethyl) 5 F6Q475 FtsJ RNA methyltransferase homolog 1 (E. coli) (Fragment) OS=Mus musculus OX=10090 GN=Ftsj1 PE=1 SV=1 F6Q475; Q8JZY1; Q91XA6; Q8CBC7; A2ALH2 FtsJ RNA methyltransferase homolog 1 (E. coli) (Fragment) OS=Mus musculus OX=10090 GN=Ftsj1 PE=1 SV=1; Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Mus musculus OX=10090 GN=Ftsj1 PE=1 SV=1; Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Mus musculus OX=10090 GN=Ftsj1 PE=2 SV=1; Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Mus musculus OX=10090 GN=Ftsj1 PE=1 SV=1; Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Mus musculus OX=10090 GN=Ftsj1 PE=1 SV=1 0 2 2 0.8818 0 1 1 1 622.79163 1244.57598 1244.57787 -1.52 -0.00095 0/0 0 0 4787917 HCD 30 MS2 44.42184 385.1 110 52.4244 14402 14402 14395 QEplus033719.raw F4 247.5 513.1 247.9 436.5 606.9 258.6 30 2.2 1 FALSE 0.001368 0.01953 0.285 -250 61019 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FQDQGPPER [K].fQDQGPPER.[V] N-Term(TMT6plex) 5 D3YZ09 H/ACA ribonucleoprotein complex subunit (Fragment) OS=Mus musculus OX=10090 GN=Gar1 PE=1 SV=1 Q9CY66-2; D3YZ09; Q9CY66-3; Q9CY66; Q3TKG5 Isoform 2 of H/ACA ribonucleoprotein complex subunit 1 OS=Mus musculus OX=10090 GN=Gar1; H/ACA ribonucleoprotein complex subunit (Fragment) OS=Mus musculus OX=10090 GN=Gar1 PE=1 SV=1; Isoform 3 of H/ACA ribonucleoprotein complex subunit 1 OS=Mus musculus OX=10090 GN=Gar1; H/ACA ribonucleoprotein complex subunit 1 OS=Mus musculus OX=10090 GN=Gar1 PE=1 SV=1; H/ACA ribonucleoprotein complex subunit OS=Mus musculus OX=10090 GN=Gar1 PE=2 SV=1 0 2 2 0.6698 0 1 1 1 651.83527 1302.66326 1302.66398 -0.56 -0.00036 0/0 0 0 5786258 HCD 30 MS2 22.05287 565.4 110 52.4269 14403 14403 14395 QEplus033719.raw F4 621.5 491.4 628.8 421.3 653 576.4 153 3.24 1 FALSE 1.14E-05 2.34E-05 0.977 -250 61046 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAEGAGTEEEGTPK [K].kAEGAGTEEEGTPk.[E] N-Term(TMT6plex); K1(TMT6plex); K14(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 1 3 3 0.6503 0 1 1 1 697.72235 2091.1525 2091.15367 -0.56 -0.00039 0/0 0 0 3534697 HCD 30 MS2 0 263.8 110 52.4417 14408 14408 14406 QEplus033719.raw F4 253.5 278 291.9 197.5 298.2 263.5 501 5.29 1 FALSE 1.14E-05 6.31E-16 3.68 -250 61060 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EALAVER [R].eALAVER.[-] N-Term(TMT6plex) 3 Q8CGK3 "Lon protease homolog, mitochondrial OS=Mus musculus OX=10090 GN=Lonp1 PE=1 SV=2" Q8CGK3; Q56A16; Q3V2D0 "Lon protease homolog, mitochondrial OS=Mus musculus OX=10090 GN=Lonp1 PE=1 SV=2; Lonp1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lonp1 PE=2 SV=1; Lon protease homolog, mitochondrial OS=Mus musculus OX=10090 GN=Lonp1 PE=2 SV=1" 0 2 2 0.3034 0 1 1 1 508.79962 1016.59197 1016.59378 -1.78 -0.0009 0/0 0 0 18450040 HCD 30 MS2 41.87825 875.4 65.201 52.4463 14410 14410 14406 QEplus033719.raw F4 925.9 731.7 970.8 864.4 749.4 1010 283 2.34 1 FALSE 0.0002218 0.004535 0.513 -250 61068 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDEQLQK [R].qDEQLQk.[T] N-Term(TMT6plex); K7(TMT6plex) 7 Q6PFA2 Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1 Q6PFA2; O08585; B1AWD9; B1AWD8; B1AWE0; Q3THU7; B1AWE1 Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain A OS=Mus musculus OX=10090 GN=Clta PE=1 SV=2; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=2 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1 0 2 2 0.4143 0 1 1 1 673.88818 1346.76909 1346.768 0.81 0.00055 0/0 0 0 11819543 HCD 30 MS2 0 876.5 110 52.4488 14411 14411 14406 QEplus033719.raw F4 1038.4 748.5 879.3 736.7 1089.8 766.5 448 3.21 1 FALSE 0.0002119 0.004421 0.516 -250 61078 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVPERDPTEKPPR [R].gVPERDPTEkPPR.[L] N-Term(TMT6plex); K10(TMT6plex) 3 Q91VY9 Zinc finger protein 622 OS=Mus musculus OX=10090 GN=Znf622 PE=1 SV=1 Q91VY9; Q3U343; Q3TCX4 Zinc finger protein 622 OS=Mus musculus OX=10090 GN=Znf622 PE=1 SV=1; C2H2-type domain-containing protein OS=Mus musculus OX=10090 GN=Zfp622 PE=2 SV=1; C2H2-type domain-containing protein OS=Mus musculus OX=10090 GN=Zfp622 PE=2 SV=1 1 4 4 0.4543 0 1 1 1 484.7811 1936.10256 1936.10163 0.48 0.00023 0/0 0 0 7740894.5 HCD 30 MS2 39.28131 639.6 110 52.4538 14413 14413 14406 QEplus033719.raw F4 740.5 484.3 719.6 468.8 672.1 752.1 471 3.28 1 FALSE 0.001395 0.01993 0.282 -250 61086 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VPQNPHGKPK [K].vPQNPHGkPk.[G] N-Term(TMT6plex); K8(TMT6plex); K10(TMT6plex) 6 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 4 4 0.6948 0 1 1 1 448.03192 1789.10586 1789.10515 0.4 0.00018 0/0 0 0 36075560 HCD 30 MS2 27.57976 829.9 38.251 52.456 14414 14414 14406 QEplus033719.raw F4 1092.6 695.6 825.4 646.1 1028.5 691.3 291 3.44 1 FALSE 1.14E-05 3.34E-06 1.138 -250 61093 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAQADVETK [R].eAQADVETk.[R] N-Term(TMT6plex); K9(TMT6plex) 4 Q8CI86 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase OS=Mus musculus OX=10090 GN=Plcb3 PE=2 SV=1" Q8CI86; P51432; Q8C8I0; Q3TWI4 "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase OS=Mus musculus OX=10090 GN=Plcb3 PE=2 SV=1; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Mus musculus OX=10090 GN=Plcb3 PE=1 SV=2; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 (Fragment) OS=Mus musculus OX=10090 GN=Plcb3 PE=1 SV=1; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase OS=Mus musculus OX=10090 GN=Plcb3 PE=2 SV=1" 0 2 2 0.5534 0 1 1 1 724.90356 1448.79985 1448.79969 0.11 0.00008 0/0 0 0 8340738.5 HCD 30 MS2 17.41704 478.6 110 52.4586 14415 14415 14406 QEplus033719.raw F4 529 431.3 485.1 343 630.8 452.3 431 3.09 1 FALSE 1.14E-05 3.78E-06 1.128 -250 61107 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLEEEEQR [K].vLEEEEQR.[R] N-Term(TMT6plex) 9 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; Q3UGC3; E9QA15; F6ZAW1; E9Q0M9; D3Z6I7; S4R1T7; E9QA16; F6QLP8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 0 2 2 0.543 0 1 1 1 630.83582 1260.66435 1260.66331 0.83 0.00052 0/0 0 0 40100140 HCD 30 MS2 39.18961 799.4 49.777 52.4684 14418 14418 14417 QEplus033719.raw F4 771.1 643.9 834.3 691.7 1038.1 817.5 263 3.37 1 FALSE 1.14E-05 0.0006307 0.702 -250 61113 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AASAEEQATIER [R].aASAEEQATIER.[N] N-Term(TMT6plex) 1 Q80X85 "28S ribosomal protein S7, mitochondrial OS=Mus musculus OX=10090 GN=Mrps7 PE=1 SV=1" Q80X85 "28S ribosomal protein S7, mitochondrial OS=Mus musculus OX=10090 GN=Mrps7 PE=1 SV=1" 0 2 2 0.6916 0 1 1 1 752.89453 1504.78179 1504.78047 0.88 0.00066 0/0 0 0 5521759.5 HCD 30 MS2 0 229.8 110 52.4709 14419 14419 14417 QEplus033719.raw F4 224 209.9 250.8 213.7 220.8 259.5 259 5.09 1 FALSE 1.14E-05 1.47E-12 2.345 -250 61121 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMNGESLDGR [R].aMNGESLDGR.[Q] N-Term(TMT6plex) 3 Q8BG13; O89086 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1;RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1 Q8BG13; O89086; Q5RJV3 RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1; RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1; Rbm3 protein OS=Mus musculus OX=10090 GN=Rbm3 PE=2 SV=1 0 2 2 0.7923 0 1 1 1 639.81952 1278.63176 1278.63097 0.62 0.0004 0/0 0 0 99980896 HCD 30 MS2 28.91583 877.9 21.294 52.4732 14420 14420 14417 QEplus033719.raw F4 884.4 904.7 932.6 563.2 1083.1 899.3 116 3.66 2 FALSE 1.14E-05 1.04E-05 1.044 -250 61127 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFNAEVHRK [K].eFNAEVHRk.[H] N-Term(TMT6plex); K9(TMT6plex) 5 P47962 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3 Q3THE1; D3YYV8; P47962; Q3TKR5; Q3U850 Ribosomal_L18_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; 60S ribosomal protein L5 (Fragment) OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=1; 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3; Ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; Ribosomal_L18_c domain-containing protein OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1 1 4 4 0.6048 0 1 1 1 397.73117 1587.90285 1587.90075 1.33 0.00053 0/0 0 0 22890220 HCD 30 MS2 23.18068 553.4 73.159 52.4754 14421 14421 14417 QEplus033719.raw F4 616.7 502.8 572.7 399.7 647.8 580.9 388 3.34 1 FALSE 4.43E-05 0.001664 0.616 -250 61134 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YETDAIQR [K].yETDAIQR.[T] N-Term(TMT6plex) 13 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; B2RWX0; B2RQQ1; I6L963; B1AR69; B2RY26; B2RXX9; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.556 0 1 1 1 612.82489 1224.6425 1224.64218 0.26 0.00016 0/0 0 0 15887008 HCD 30 MS2 11.49505 1127.7 99.976 52.4778 14422 14422 14417 QEplus033719.raw F4 1459.8 342.9 846.7 2027.3 447.1 1642.4 198 2.59 5 FALSE 1.14E-05 0.0004889 0.724 -250 61149 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAIRLER [K].eAIRLER.[L] N-Term(TMT6plex) 5 Q8BJS4 SUN domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sun2 PE=1 SV=3 Q8BJS4; Q8BJS4-3; Q6A022; Q8BJS4-2; Q4QQM3 SUN domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sun2 PE=1 SV=3; Isoform 3 of SUN domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sun2; MKIAA0668 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0668 PE=4 SV=1; Isoform 2 of SUN domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sun2; Unc84b protein OS=Mus musculus OX=10090 GN=Sun2 PE=2 SV=1 1 3 3 0.1299 0 1 1 1 372.56259 1115.67322 1115.67342 -0.18 -0.00007 0/0 0 0 10487033 HCD 30 MS2 0 394.1 110 52.4828 14424 14424 14417 QEplus033719.raw F4 376.2 359.5 444.2 291.9 465.1 427.4 266 1.77 1 FALSE 0.008127 0.1373 -0.071 -250 61163 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QFREDDFRR [R].qFREDDFRR.[V] N-Term(TMT6plex) 2 Q9CZN7 "Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" Q9CZN7-2; Q9CZN7 "Isoform 2 of Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2; Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" 2 4 4 0.4821 0 1 1 1 375.19995 1497.77797 1497.77599 1.32 0.0005 0/0 0 0 8761027 HCD 30 MS2 7.415948 478.3 110 52.4878 14426 14426 14417 QEplus033719.raw F4 489.7 443.9 564.6 369.2 470.5 531.8 205 2.24 1 FALSE 0.002705 0.05396 0.131 -250 61172 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFNDGTDEKK [K].rFNDGTDEkk.[K] N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 2 3 3 0.5699 0 1 1 1 633.02948 1897.07389 1897.07464 -0.4 -0.00025 0/0 0 0 7056712 HCD 30 MS2 26.20345 873.7 110 52.4903 14427 14427 14417 QEplus033719.raw F4 1177 492.9 806.2 1118.6 775.5 871.8 394 2.72 1 FALSE 0.001028 0.01352 0.352 -250 61178 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAQQELEEQTRR [K].kAQQELEEQTRR.[A] N-Term(TMT6plex); K1(TMT6plex) 2 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 2 4 4 0.6012 0 1 1 1 494.28421 1974.11501 1974.11326 0.89 0.00044 0/0 0 0 81763016 HCD 30 MS2 6.382092 439.7 14.108 52.4976 14429 14429 14428 QEplus033719.raw F4 460.8 415.9 487.3 349.8 515.1 409.6 466 3.46 1 FALSE 1.14E-05 1.90E-09 1.754 -250 61186 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DMTHWR [K].dMTHWR.[Q] N-Term(TMT6plex) 7 A2A9M4 Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=2 A2A9M4; A2A9M5; Q8R1A4-2; Q3U806; A0A0U1RNK7; E9PX48; Q8R1A4 Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=2; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=1; Isoform 2 of Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7; DOCKER domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dock7 PE=2 SV=1; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=1; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=2; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=3 0 3 3 0.6084 0 1 1 1 358.84976 1074.53473 1074.53521 -0.45 -0.00016 0/0 0 0 6446640 HCD 30 MS2 39.32467 444.5 110 52.5001 14430 14430 14428 QEplus033719.raw F4 467.2 336.4 533.4 322.4 493 514.5 58 3.09 1 FALSE 0.002628 0.05217 0.136 -250 61209 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQGATCSNNK [K].lQGATcSNNk.[L] N-Term(TMT6plex); C6(Carbamidomethyl); K10(TMT6plex) 5 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q80U36; Q9JHU4; Q3UA73; Q8C6T5; Q923F5 MKIAA0325 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2; Dynein_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Dync1h1 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1 0 3 3 0.6658 0 1 1 1 517.61774 1550.83866 1550.8361 1.65 0.00085 0/0 0 0 15431142 HCD 30 MS2 35.41809 959.4 110 52.5093 14434 14434 14428 QEplus033719.raw F4 1292.9 701.7 1001.3 730.9 1053.6 976.1 355 4.07 1 FALSE 1.14E-05 1.12E-05 1.038 -250 61217 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEEQKPER [K].lEEQkPER.[V] N-Term(TMT6plex); K5(TMT6plex) 2 P63028 Translationally-controlled tumor protein OS=Mus musculus OX=10090 GN=Tpt1 PE=1 SV=1 D3YU75; P63028 Translationally-controlled tumor protein OS=Mus musculus OX=10090 GN=Tpt1 PE=1 SV=1; Translationally-controlled tumor protein OS=Mus musculus OX=10090 GN=Tpt1 PE=1 SV=1 0 3 3 0.4758 0 1 1 1 496.29266 1486.86344 1486.86296 0.32 0.00016 0/0 0 0 15336191 HCD 30 MS2 34.14826 1085.5 105.549 52.5118 14435 14435 14428 QEplus033719.raw F4 1202.2 743.9 1067.5 944.4 1278.8 1276 368 2.48 1 FALSE 4.43E-05 0.001649 0.617 -250 61232 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLEDSYEGR [K].gLEDSYEGR.[L] N-Term(TMT6plex) 2 Q3TCN2 Putative phospholipase B-like 2 OS=Mus musculus OX=10090 GN=Plbd2 PE=1 SV=2 Q3TCN2-2; Q3TCN2 Isoform 2 of Putative phospholipase B-like 2 OS=Mus musculus OX=10090 GN=Plbd2; Putative phospholipase B-like 2 OS=Mus musculus OX=10090 GN=Plbd2 PE=1 SV=2 0 2 2 0.7618 0 1 1 1 627.81226 1254.61724 1254.61636 0.7 0.00044 0/0 0 0 11080622 HCD 30 MS2 0 663 110 52.5168 14437 14437 14428 QEplus033719.raw F4 691 552.7 774.1 600.2 728.8 631 81 3.61 1 FALSE 1.14E-05 2.66E-05 0.967 -250 61236 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEEMCSK [K].eAEEMcSk.[F] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 3 G3X8Y3 "N-alpha-acetyltransferase 15, NatA auxiliary subunit OS=Mus musculus OX=10090 GN=Naa15 PE=1 SV=1" A0A0A6YW80; G3X8Y3; Q80UM3 "N-alpha-acetyltransferase 15, NatA auxiliary subunit OS=Mus musculus OX=10090 GN=Naa15 PE=1 SV=1; N-alpha-acetyltransferase 15, NatA auxiliary subunit OS=Mus musculus OX=10090 GN=Naa15 PE=1 SV=1; N-alpha-acetyltransferase 15, NatA auxiliary subunit OS=Mus musculus OX=10090 GN=Naa15 PE=1 SV=1" 0 2 2 0.7923 0 1 1 1 721.35785 1441.70842 1441.70672 1.18 0.00085 0/0 0 0 8555572 HCD 30 MS2 0 653.1 110 52.5193 14438 14438 14428 QEplus033719.raw F4 707.4 516.2 653.3 522.7 872.7 646.1 103 3.13 1 FALSE 1.14E-05 0.0004796 0.726 -250 61240 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMEGAGTDEK [K].aMEGAGTDEk.[T] N-Term(TMT6plex); K10(TMT6plex) 8 P14824; Q99JX6 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3;Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 Q3V2Z4; P14824; F8WIT2; Q3UI56; Q3TUI1; Q8CEX0; Q99JX6; Q3UDK4 Annexin OS=Mus musculus OX=10090 PE=2 SV=1; Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 0 2 2 0.6737 0 1 1 1 733.87872 1466.75017 1466.75612 -4.05 -0.00297 0/0 0 0 6101929 HCD 30 MS2 31.03549 645 110 52.5266 14440 14440 14439 QEplus033719.raw F4 651.8 508.3 667.1 555.4 802.1 685.4 192 3.34 2 FALSE 1.14E-05 1.94E-07 1.373 -250 61249 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VPQNPHGKPK [K].vPQNPHGkPk.[G] N-Term(TMT6plex); K8(TMT6plex); K10(TMT6plex) 6 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 3 3 0.6923 0 1 1 1 597.04065 1789.10739 1789.10515 1.26 0.00075 0/0 0 0 29003554 HCD 30 MS2 25.77831 1170.5 65.821 52.5336 14443 14443 14439 QEplus033719.raw F4 1417.5 881.3 1135.5 866.9 1594 1128 273 3.25 1 FALSE 1.14E-05 2.00E-07 1.37 -250 61258 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRPPLAAGANSK [R].nRPPLAAGANSk.[G] N-Term(TMT6plex); K12(TMT6plex) 9 Q3UR33; Q61033; Q61029-2 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1;Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4;Isoform Delta of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo" Q3UR33; Q3U7B3; Q61029; Q3U955; Q61033; Q61029-4; Q61033-2; Q61029-3; Q61029-2 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4; Isoform Gamma of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo; Isoform Zeta of Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo; Isoform Epsilon of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo; Isoform Delta of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo" 0 3 3 0.7195 0 1 1 1 551.99902 1653.98252 1653.98006 1.49 0.00082 0/0 0 0 27366446 HCD 30 MS2 16.95361 1065.3 69.719 52.5359 14444 14444 14439 QEplus033719.raw F4 1170.9 1027.2 1148.3 729.3 1263.4 1052.7 366 5.24 3 FALSE 1.14E-05 9.95E-13 2.377 -250 61270 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQGATCSNNK [K].lQGATcSNNk.[L] N-Term(TMT6plex); C6(Carbamidomethyl); K10(TMT6plex) 5 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q80U36; Q9JHU4; Q3UA73; Q8C6T5; Q923F5 MKIAA0325 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2; Dynein_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Dync1h1 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1 0 2 2 0.6169 0 1 1 1 775.92273 1550.83818 1550.8361 1.34 0.00104 0/0 0 0 14533575 HCD 30 MS2 5.811092 643.9 110 52.5407 14446 14446 14439 QEplus033719.raw F4 669.1 484.2 664.8 614.8 826.4 604.3 361 4.15 1 FALSE 1.14E-05 2.60E-08 1.538 -250 61284 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDPTSFR [K].eDPTSFR.[L] N-Term(TMT6plex) 6 Q3TYS4 Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1 Q3TYS4; Q3TAW4; Q8CDS4; Q3TIS3; Q9D662; Q3UKB4 Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1; Protein transport protein Sec23B OS=Mus musculus OX=10090 GN=Sec23b PE=1 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1 0 2 2 0.3878 0 1 1 1 540.78137 1080.55547 1080.5523 2.93 0.00158 0/0 0 0 10817920 HCD 30 MS2 36.28558 1034.2 110 52.5457 14448 14448 14439 QEplus033719.raw F4 1268 831.8 1115.1 684 1282.3 1023.8 168 2.45 1 FALSE 0.0009259 0.01271 0.363 -250 61299 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGFAGDDAPR [K].aGFAGDDAPR.[A] N-Term(TMT6plex) 36 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q3UAF6; Q3UD81; Q3U122; E9Q1F2; Q3UAA9; F6WX90; A0A1D5RM20; B2RRX1; A0A494B9T3; Q3U5R4; A1E281; Q3UAF7; G3UZ07; P62737; G3UYG0; P68134; Q3UBP6; D3YZY0; E9Q5F4; B1ATY1; P68033; P63260; Q61852; Q3UA89; Q3UGS0; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=4 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 2 2 0.7138 0 1 1 1 603.3103 1205.61333 1205.61122 1.75 0.00106 0/0 0 0 1517406080 HCD 30 MS2 4.013565 588.9 1.239 52.5555 14451 14451 14450 QEplus033719.raw F4 514.1 497.9 646.9 503.3 653.6 717.8 137 3.11 4 FALSE 1.14E-05 2.61E-05 0.968 -250 61306 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVDDSTGFR [R].gVDDSTGFR.[T] N-Term(TMT6plex) 8 Q5PR72 Phosphodiesterase OS=Mus musculus OX=10090 GN=Pde2a PE=1 SV=1 Q5PR72; Q922S4-3; Q922S4; A0A1B0GRJ9; Q3TYK5; Q3TD37; Q922S4-2; F7D3W5 "Phosphodiesterase OS=Mus musculus OX=10090 GN=Pde2a PE=1 SV=1; Isoform PDE2A2 of cGMP-dependent 3',5'-cyclic phosphodiesterase OS=Mus musculus OX=10090 GN=Pde2a; cGMP-dependent 3',5'-cyclic phosphodiesterase OS=Mus musculus OX=10090 GN=Pde2a PE=1 SV=4; Phosphodiesterase OS=Mus musculus OX=10090 GN=Pde2a PE=1 SV=1; Phosphodiesterase OS=Mus musculus OX=10090 GN=Pde2a PE=2 SV=1; Phosphodiesterase OS=Mus musculus OX=10090 GN=Pde2a PE=2 SV=1; Isoform PDE2A1 of cGMP-dependent 3',5'-cyclic phosphodiesterase OS=Mus musculus OX=10090 GN=Pde2a; Phosphodiesterase OS=Mus musculus OX=10090 GN=Gm45837 PE=1 SV=1" 0 2 2 0.6377 0 1 1 1 591.80194 1182.59661 1182.59523 1.16 0.00069 0/0 0 0 3778421.25 HCD 30 MS2 49.21972 798.4 110 52.558 14452 14452 14450 QEplus033719.raw F4 943.8 549.3 902.8 669.3 808.2 917.1 113 2.76 1 FALSE 1.14E-05 4.73E-06 1.109 -250 61312 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNVGAGSHPNK [R].vNVGAGSHPNk.[V] N-Term(TMT6plex); K11(TMT6plex) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.6921 0 1 1 1 513.3006 1537.88724 1537.8851 1.39 0.00072 0/0 0 0 133633264 HCD 30 MS2 7.153311 646.3 14.719 52.5603 14453 14453 14450 QEplus033719.raw F4 686.8 638.5 648.7 410.2 962.2 531.1 423 4.45 1 FALSE 1.14E-05 1.98E-10 1.941 -250 61319 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQAPAVATT [R].tQAPAVATT.[-] N-Term(TMT6plex) 7 Q3TXS9 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1 Q3TXS9; Q3TLE5; Q3TI78; Q3TXR5; P25444; Q3TL20; Q3UB36 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=3; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1 0 2 2 0.6893 0 1 1 1 544.81213 1088.61699 1088.6149 1.92 0.00104 0/0 0 0 65657196 HCD 30 MS2 4.679423 301.1 18.351 52.5625 14454 14454 14450 QEplus033719.raw F4 360 202.8 315.3 250.5 286.2 391.5 312 2.8 1 FALSE 0.0003211 0.006301 0.472 -250 61328 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVLEAK [K].rVLEAk.[VE] N-Term(TMT6plex); K6(TMT6plex) 2 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 Q9DBT1; Q9CZD3 WHEP-TRS domain-containing protein OS=Mus musculus OX=10090 GN=F13a1 PE=2 SV=1; Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 1 3 3 0.2074 0 1 1 1 391.92914 1173.77286 1173.77196 0.76 0.0003 0/0 0 0 46142264 HCD 30 MS2 11.57912 570.4 33.571 52.5648 14455 14455 14450 QEplus033719.raw F4 668.4 358.8 582 668.5 654.7 490.1 261 2.7 1 FALSE 0.001028 0.01348 0.352 -250 61346 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLTDADAMK [K].rLTDADAmk.[Y] N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 1 3 3 0.6033 0 1 1 1 498.9505 1494.83695 1494.83503 1.28 0.00064 0/0 0 0 16299693 HCD 30 MS2 7.293926 767.8 110 52.5696 14457 14457 14450 QEplus033719.raw F4 878.8 505.3 853.7 698.1 762.2 909 431 3.05 1 FALSE 7.59E-05 0.002768 0.566 -250 61351 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGAALSPSPDCR [K].dGAALSPSPDcR.[V] N-Term(TMT6plex); C11(Carbamidomethyl) 5 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.7363 0 1 1 1 737.86176 1474.71623 1474.71576 0.32 0.00024 0/0 0 0 10958319 HCD 30 MS2 32.31578 405.7 110 52.5721 14458 14458 14450 QEplus033719.raw F4 536.3 124 306.5 696.1 222.2 549.3 80 3.83 2 FALSE 1.14E-05 1.12E-07 1.418 -250 61357 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGTVLANPR [R].dGTVLANPR.[R] N-Term(TMT6plex) 5 A0A0R4J1Y3 Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Mus musculus OX=10090 GN=Osgep PE=1 SV=1 E0CXW7; A0A0R4J1Y3; Q58EU1; E9QMF4; Q3UQ67 N6-L-threonylcarbamoyladenine synthase OS=Mus musculus OX=10090 GN=Osgep PE=1 SV=1; Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Mus musculus OX=10090 GN=Osgep PE=1 SV=1; Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Mus musculus OX=10090 GN=Osgep PE=2 SV=1; N6-L-threonylcarbamoyladenine synthase OS=Mus musculus OX=10090 GN=Osgep PE=1 SV=1; Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Mus musculus OX=10090 GN=Osgep PE=2 SV=1 0 2 2 0.4908 0 1 1 1 586.33636 1171.66545 1171.66325 1.88 0.0011 0/0 0 0 7703148 HCD 30 MS2 36.47149 838.6 110 52.5746 14459 14459 14450 QEplus033719.raw F4 976 690 834.4 621.8 1016.3 893 234 2.18 1 FALSE 0.005139 0.08826 0.039 -250 61365 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQYVGK [R].qQYVGk.[I] N-Term(TMT6plex); K6(TMT6plex) 4 A1L2Z3 ER membrane protein complex subunit 1 OS=Mus musculus OX=10090 GN=Emc1 PE=2 SV=1 A1L2Z3; Q8C7X2-2; Z4YJW0; Q8C7X2 ER membrane protein complex subunit 1 OS=Mus musculus OX=10090 GN=Emc1 PE=2 SV=1; Isoform 2 of ER membrane protein complex subunit 1 OS=Mus musculus OX=10090 GN=Emc1; ER membrane protein complex subunit 1 OS=Mus musculus OX=10090 GN=Emc1 PE=1 SV=1; ER membrane protein complex subunit 1 OS=Mus musculus OX=10090 GN=Emc1 PE=1 SV=1 0 2 2 0.3231 0 1 1 1 590.85846 1180.70964 1180.70903 0.52 0.00031 0/0 0 0 5076172.5 HCD 30 MS2 35.66861 1005.5 110 52.5771 14460 14460 14450 QEplus033719.raw F4 1072.6 762.6 1054.8 891.8 1138.9 1112 218 2.29 1 FALSE 0.003182 0.06289 0.106 -250 61373 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDEQLQK [R].qDEQLQk.[T] N-Term(TMT6plex); K7(TMT6plex) 7 Q6PFA2 Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1 Q6PFA2; O08585; B1AWD9; B1AWD8; B1AWE0; Q3THU7; B1AWE1 Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain A OS=Mus musculus OX=10090 GN=Clta PE=1 SV=2; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=2 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1 0 3 3 0.3092 0 1 1 1 449.59445 1346.7688 1346.768 0.6 0.00027 0/0 0 0 28963498 HCD 30 MS2 68.57676 756.7 33.325 52.5844 14462 14462 14461 QEplus033719.raw F4 1019.4 593.9 781.8 524.7 901.3 719.2 448 2.62 1 FALSE 0.005472 0.09259 0.027 -250 61378 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEHIPAGK [R].aEHIPAGk.[R] N-Term(TMT6plex); K8(TMT6plex) 8 Q8CI51 PDZ and LIM domain protein 5 OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=4 D9J301; A0A0G2JGZ5; D9J2Z9; D9J302; A0A0G2JEJ0; D9J300; Q8CI51; Q2Q7P0 ENH isoform 1d OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=1; PDZ and LIM domain protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=1; ENH isoform 1b OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=1; ENH isoform 1e OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=1; PDZ and LIM domain protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=1; ENH isoform 1c OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=1; PDZ and LIM domain protein 5 OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=4; ENH1 OS=Mus musculus OX=10090 GN=Pdlim5 PE=2 SV=1 0 3 3 0.6318 0 1 1 1 427.59613 1280.77384 1280.77269 0.89 0.00038 0/0 0 0 35897028 HCD 30 MS2 30.0105 411.5 30.227 52.5866 14463 14463 14461 QEplus033719.raw F4 473.4 362.9 412.5 261.2 569.7 389.3 305 2.58 1 FALSE 0.001134 0.01515 0.331 -250 61401 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVCSEAAQK [R].nVcSEAAQk.[R] N-Term(TMT6plex); C3(Carbamidomethyl); K9(TMT6plex) 3 Q8VEE0 Ribulose-phosphate 3-epimerase OS=Mus musculus OX=10090 GN=Rpe PE=1 SV=1 Q8VEE0; Q3UDM8; B2KGF0 Ribulose-phosphate 3-epimerase OS=Mus musculus OX=10090 GN=Rpe PE=1 SV=1; Ribulose-phosphate 3-epimerase OS=Mus musculus OX=10090 GN=Rpe PE=2 SV=1; Ribulose-phosphate 3-epimerase OS=Mus musculus OX=10090 GN=Rpe PE=1 SV=1 0 2 2 0.6414 0 1 1 1 732.89777 1464.78826 1464.78808 0.12 0.00009 0/0 0 0 10563019 HCD 30 MS2 0 546.7 110 52.5939 14466 14466 14461 QEplus033719.raw F4 568.1 476.8 539.4 436.1 662.9 596.7 346 3.96 1 FALSE 1.14E-05 1.56E-06 1.201 -250 61421 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSYGGPPRREPLPSR [R].dSYGGPPRREPLPSR.[R] N-Term(TMT6plex) 2 Q91VM5 "RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" A0A2I3BRL8; Q91VM5 "Predicted gene 7324 OS=Mus musculus OX=10090 GN=Gm7324 PE=4 SV=1; RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" 2 4 4 0.5612 0 1 1 1 479.01068 1913.02089 1913.01907 0.95 0.00046 0/0 0 0 7860595 HCD 30 MS2 44.28798 774.5 110 52.6014 14469 14469 14461 QEplus033719.raw F4 813.2 743.1 778.8 533.6 1053.4 724.8 338 2.37 1 FALSE 0.002845 0.05566 0.126 -250 61434 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLNSVATAR [K].gLNSVATAR.[I] N-Term(TMT6plex) 5 E9PWK1 Epoxide hydrolase OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=1 Q8K2W5; F6YTS6; E9PWK1; Q9D379; Q6PEV0 Epoxide hydrolase OS=Mus musculus OX=10090 GN=Ephx1 PE=2 SV=1; Epoxide hydrolase 1 (Fragment) OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=2; Epoxide hydrolase OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=1; Epoxide hydrolase 1 OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=2; Epoxide hydrolase OS=Mus musculus OX=10090 GN=Ephx1 PE=2 SV=1 0 2 2 0.5164 0 1 1 1 559.33026 1117.65325 1117.65269 0.5 0.00028 0/0 0 0 4948497 HCD 30 MS2 52.3833 778.5 110 52.6065 14471 14471 14461 QEplus033719.raw F4 797.8 629.4 837.5 623.4 922.9 859.7 309 2.75 1 FALSE 4.43E-05 0.001634 0.618 -250 61442 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAQLDCSK [K].nAQLDcSk.[L] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 2 Q99LB6 Methionine adenosyltransferase 2 subunit beta OS=Mus musculus OX=10090 GN=Mat2b PE=1 SV=1 Q99LB6-2; Q99LB6 Isoform 2 of Methionine adenosyltransferase 2 subunit beta OS=Mus musculus OX=10090 GN=Mat2b; Methionine adenosyltransferase 2 subunit beta OS=Mus musculus OX=10090 GN=Mat2b PE=1 SV=1 0 2 2 0.6189 0 1 1 1 697.3797 1393.75212 1393.75097 0.83 0.00058 0/0 0 0 7786931 HCD 30 MS2 9.301328 670.2 110 52.6138 14473 14473 14472 QEplus033719.raw F4 736.4 628.4 662 551 795.6 647.9 341 2.86 1 FALSE 1.14E-05 0.0003237 0.759 -250 61448 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GESPVDYDGGR [K].gESPVDYDGGR.[T] N-Term(TMT6plex) 6 Q922R8 Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=3 Q3TML0; Q922R8; F7DBQ0; Q3THH1; Q9DAB4; Q3TJL8 Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=1; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=3; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=1; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=2 SV=1; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=2 SV=1; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=2 SV=1 0 2 2 0.8042 0 1 1 1 690.83405 1380.66081 1380.65929 1.1 0.00076 0/0 0 0 26681490 HCD 30 MS2 0 708.4 110 52.6233 14477 14477 14472 QEplus033719.raw F4 706.2 685.4 808 595.8 749 706.2 73 3.32 1 FALSE 1.14E-05 5.75E-08 1.473 -250 61471 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LHISPDR [R].lHISPDR.[V] N-Term(TMT6plex) 1 P34884 Macrophage migration inhibitory factor OS=Mus musculus OX=10090 GN=Mif PE=1 SV=2 P34884 Macrophage migration inhibitory factor OS=Mus musculus OX=10090 GN=Mif PE=1 SV=2 0 3 3 0.5532 0 1 1 1 356.21194 1066.62128 1066.62066 0.58 0.00021 0/0 0 0 15685051 HCD 30 MS2 59.63702 243.1 72.783 52.6301 14480 14480 14472 QEplus033719.raw F4 192.3 211.7 240.9 311.3 262.8 239.5 146 2.82 1 FALSE 5.44E-05 0.001878 0.604 -250 61480 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DCDLDVACRR [KR].dcDLDVAcRR.[IV] N-Term(TMT6plex); C2(Carbamidomethyl); C8(Carbamidomethyl) 11 P47739; Q8C3C9 "Aldehyde dehydrogenase, dimeric NADP-preferring OS=Mus musculus OX=10090 GN=Aldh3a1 PE=1 SV=2;Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a2 PE=2 SV=1" P47739; B7ZN13; Q8C3C9; B1AV77; Q99PH3; P47740; B1ATI0; Q3UNF5; Q99PH4; Q8BQ93; Q8C5J1 "Aldehyde dehydrogenase, dimeric NADP-preferring OS=Mus musculus OX=10090 GN=Aldh3a1 PE=1 SV=2; Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a1 PE=2 SV=1; Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a2 PE=2 SV=1; Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a2 PE=1 SV=1; Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a2 PE=3 SV=1; Aldehyde dehydrogenase family 3 member A2 OS=Mus musculus OX=10090 GN=Aldh3a2 PE=1 SV=2; Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a2 PE=1 SV=1; Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a1 PE=2 SV=1; Aldehyde dehydrogenase OS=Mus musculus OX=10090 GN=Aldh3a2 PE=3 SV=1; Aldehyde dehydrogenase OS=Mus musculus OX=10090 PE=2 SV=1; Aldehyde dehydrogenase OS=Mus musculus OX=10090 PE=2 SV=1" 1 3 3 0.7231 0 1 1 1 503.57614 1508.71387 1508.71471 -0.56 -0.00028 0/0 0 0 10565725 HCD 30 MS2 58.51747 1033.2 110 52.6326 14481 14481 14472 QEplus033719.raw F4 1146 1039.8 1298.4 686.7 689.7 1338.5 65 2.6 2 FALSE 1.14E-05 0.0004807 0.726 -250 61496 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CATITPDEAR [K].cATITPDEAR.[V] N-Term(TMT6plex); C1(Carbamidomethyl) 3 P54071 "Isocitrate dehydrogenase [NADP], mitochondrial OS=Mus musculus OX=10090 GN=Idh2 PE=1 SV=3" A0A0U1RP68; P54071; D6RIL6 "Isocitrate dehydrogenase [NADP], mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Idh2 PE=1 SV=1; Isocitrate dehydrogenase [NADP], mitochondrial OS=Mus musculus OX=10090 GN=Idh2 PE=1 SV=3; Isocitrate dehydrogenase [NADP], mitochondrial OS=Mus musculus OX=10090 GN=Idh2 PE=1 SV=1" 0 2 2 0.7014 0 1 1 1 681.84863 1362.68999 1362.68848 1.11 0.00075 0/0 0 0 15735917 HCD 30 MS2 26.60032 663.6 110 52.6424 14484 14484 14483 QEplus033719.raw F4 739.7 581.7 738 581.8 682.6 658.1 160 3.65 1 FALSE 1.14E-05 4.32E-06 1.117 -250 61506 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFNAEVHRK [K].eFNAEVHRk.[H] N-Term(TMT6plex); K9(TMT6plex) 5 P47962 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3 Q3THE1; D3YYV8; P47962; Q3TKR5; Q3U850 Ribosomal_L18_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; 60S ribosomal protein L5 (Fragment) OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=1; 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3; Ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; Ribosomal_L18_c domain-containing protein OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1 1 3 3 0.6793 0 1 1 1 529.97229 1587.90232 1587.90075 0.99 0.00052 0/0 0 0 50644908 HCD 30 MS2 8.69431 1072.8 38.561 52.6471 14486 14486 14483 QEplus033719.raw F4 1200.1 942.2 1191.2 837.6 1147.5 1118 382 3.43 1 FALSE 1.14E-05 6.62E-06 1.081 -250 61518 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APPESLCR [R].aPPESLcR.[H] N-Term(TMT6plex); C7(Carbamidomethyl) 1 Q9CWS0 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Mus musculus OX=10090 GN=Ddah1 PE=1 SV=3" Q9CWS0 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Mus musculus OX=10090 GN=Ddah1 PE=1 SV=3" 0 2 2 0.6157 0 1 1 1 579.81195 1158.61662 1158.61386 2.39 0.00138 0/0 0 0 13139881 HCD 30 MS2 30.68371 1057.1 110 52.6519 14488 14488 14483 QEplus033719.raw F4 1175.6 883.3 1083.9 944.2 1108 1147.4 136 2.42 1 FALSE 0.001395 0.01997 0.281 -250 61535 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AACNGPYDGK [K].aAcNGPYDGk.[W] N-Term(TMT6plex); C3(Carbamidomethyl); K10(TMT6plex) 6 Q9CPV4 Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=1 F6ZTG3; E9Q197; Q9CPV4-2; Q9CPV4; Q9CPV4-3; F7BB55 Glyoxalase domain-containing protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=1; Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=1; Isoform 2 of Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4; Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=1; Isoform 3 of Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4; Glyoxalase domain-containing protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=8 0 2 2 0.6361 0 1 1 1 755.89111 1510.77495 1510.77243 1.67 0.00126 0/0 0 0 5123682 HCD 30 MS2 34.27001 367.2 110 52.6569 14490 14490 14483 QEplus033719.raw F4 347.6 326.7 413.8 348 369.6 397.4 203 3.6 1 FALSE 1.14E-05 6.32E-07 1.275 -250 61543 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSQDAGGFGPEDR [R].dSQDAGGFGPEDR.[L] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.8523 0 1 1 1 790.36432 1579.72136 1579.71859 1.75 0.00138 0/0 0 0 2937895 HCD 30 MS2 0 287.2 110 52.6595 14491 14491 14483 QEplus033719.raw F4 298.7 253.8 317.9 230.1 333.4 289.1 22 4.47 2 FALSE 1.14E-05 3.30E-08 1.519 -250 61547 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFNDGTDEKK [K].rFNDGTDEkk.[K] N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 2 4 4 0.4554 0 1 1 1 475.02448 1897.07607 1897.07464 0.76 0.00036 0/0 0 0 29143528 HCD 30 MS2 39.10554 953.3 46.741 52.6617 14492 14492 14483 QEplus033719.raw F4 1086.7 661.5 956.5 979.3 1052.7 982.9 398 3.36 1 FALSE 0.002343 0.04675 0.152 -250 61555 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNSGEPGAPGNKGDTGAK [K].gNSGEPGAPGNkGDTGAk.[G] N-Term(TMT6plex); K12(TMT6plex); K18(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 1 3 3 0.7427 0 1 1 1 767.75293 2301.24424 2301.2402 1.75 0.00135 0/0 0 0 20607518 HCD 30 MS2 0 810.1 110 52.6642 14493 14493 14483 QEplus033719.raw F4 712.8 982.5 1093.9 373.2 895.6 802.5 418 4.43 1 FALSE 1.14E-05 3.94E-13 2.454 -250 61560 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNSGEPGAPGNKGDTGAK [K].gNSGEPGAPGNkGDTGAk.[G] N-Term(TMT6plex); K12(TMT6plex); K18(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 1 4 4 0.69 0 1 1 1 576.06622 2301.24306 2301.2402 1.24 0.00072 0/0 0 0 17366944 HCD 30 MS2 24.39942 937 110 52.6715 14495 14495 14494 QEplus033719.raw F4 1127.1 893.8 1162.2 576.9 906.8 955.2 413 4.29 1 FALSE 1.14E-05 6.93E-10 1.837 -250 61567 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEVPEEK [R].nEVPEEk.[L] N-Term(TMT6plex); K7(TMT6plex) 7 Q6Q477 Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1 Q6Q477-2; Q6Q477; D1FNM9; D1FNM8; H2BL43; E9Q828; F7AAP4 Isoform 2 of Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4; Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=2 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=2 SV=2; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=2 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1 0 2 2 0.5171 0 1 1 1 651.86957 1302.73186 1302.73055 1 0.00065 0/0 0 0 10652322 HCD 30 MS2 26.79332 991.5 110 52.6741 14496 14496 14494 QEplus033719.raw F4 1043.5 741.6 1051.7 869.5 1185.2 1057.6 367 2.63 1 FALSE 0.0005751 0.008702 0.426 -250 61574 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSTASQVLQR [K].gSTASQVLQR.[L] N-Term(TMT6plex) 3 Q3THU8 "Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=2 SV=1" Q3THU8; G5E902; Q8VEM8 "Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=2 SV=1; Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=1 SV=1; Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=1 SV=1" 0 2 2 0.6422 0 1 1 1 638.36511 1275.72295 1275.72183 0.88 0.00056 0/0 0 0 112467032 HCD 30 MS2 1.88428 681 16.875 52.6763 14497 14497 14494 QEplus033719.raw F4 670.9 523.9 742.7 830.2 472.7 845.4 382 3.13 1 FALSE 1.14E-05 2.31E-07 1.358 -250 61583 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVDRNEGLK [R].eVDRNEGLk.[F] N-Term(TMT6plex); K9(TMT6plex) 3 A0A3Q4EI12 Ras-related protein Rab-18 OS=Mus musculus OX=10090 GN=Rab18 PE=1 SV=1 A0A3Q4EI12; P35293; Q8CEH2 Ras-related protein Rab-18 OS=Mus musculus OX=10090 GN=Rab18 PE=1 SV=1; Ras-related protein Rab-18 OS=Mus musculus OX=10090 GN=Rab18 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rab18 PE=2 SV=1 1 3 3 0.5391 0 1 1 1 506.6283 1517.87033 1517.86878 1.03 0.00052 0/0 0 0 36044120 HCD 30 MS2 10.78567 1120.9 57.98 52.6786 14498 14498 14494 QEplus033719.raw F4 1166.8 799.4 1214.6 1073.3 1120.8 1350.7 495 2.43 1 FALSE 1.14E-05 0.0004131 0.738 -250 61586 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YTTLHSK [R].yTTLHSk.[C] N-Term(TMT6plex); K7(TMT6plex) 14 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 Q9QXZ0-3; B1ARU4; E9QA63; E9QNP1; Q5DTZ2; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8 Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; MKIAA1251 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 3 3 0.2143 0 1 1 1 436.59619 1307.77402 1307.77236 1.27 0.00055 0/0 0 0 11816943 HCD 30 MS2 58.68484 1183.1 90.234 52.6809 14499 14499 14494 QEplus033719.raw F4 1483.7 664.9 1284.2 1086.2 1087 1492.9 420 1.82 3 FALSE 0.001641 0.02671 0.234 -250 61594 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CCTESLVNR [K].ccTESLVNR.[R] N-Term(TMT6plex); C1(Carbamidomethyl); C2(Carbamidomethyl) 2 P02769; P02768-1 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor;SWISS-PROT:P02768-1 Tax_Id=9606 Gene_Symbol=ALB Isoform 1 of Serum albumin precursor P02769; P02768-1 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor; SWISS-PROT:P02768-1 Tax_Id=9606 Gene_Symbol=ALB Isoform 1 of Serum albumin precursor 0 2 2 0.727 0 1 1 1 684.33478 1367.66228 1367.66089 1.02 0.0007 0/0 0 0 10863980 HCD 30 MS2 0 543.9 110 52.6834 14500 14500 14494 QEplus033719.raw F4 615.1 160.5 239.8 124.3 1958.3 165.2 87 3.04 2 TRUE 1.14E-05 0.0001032 0.854 -250 61609 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFNAEVHRK [K].eFNAEVHRk.[H] N-Term(TMT6plex); K9(TMT6plex) 5 P47962 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3 Q3THE1; D3YYV8; P47962; Q3TKR5; Q3U850 Ribosomal_L18_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; 60S ribosomal protein L5 (Fragment) OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=1; 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3; Ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; Ribosomal_L18_c domain-containing protein OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1 1 2 2 0.4771 0 1 1 1 794.45508 1587.90288 1587.90075 1.34 0.00107 0/0 0 0 4534322.5 HCD 30 MS2 10.69175 315.1 110 52.6882 14502 14502 14494 QEplus033719.raw F4 309.8 265.2 339.2 248.4 374.7 353.1 388 3.71 1 FALSE 1.14E-05 8.17E-06 1.064 -250 61615 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VFASSAER [K].vFASSAER.[H] N-Term(TMT6plex) 3 Q8R570 Synaptosomal-associated protein 47 OS=Mus musculus OX=10090 GN=Snap47 PE=1 SV=1 B2FDF6; Q8R570; Q8R570-2 Synaptosomal-associated protein 47 OS=Mus musculus OX=10090 GN=Snap47 PE=1 SV=1; Synaptosomal-associated protein 47 OS=Mus musculus OX=10090 GN=Snap47 PE=1 SV=1; Isoform 2 of Synaptosomal-associated protein 47 OS=Mus musculus OX=10090 GN=Snap47 0 2 2 0.2785 0 1 1 1 548.30432 1095.60137 1095.59959 1.62 0.00089 0/0 0 0 6098327 HCD 30 MS2 21.16254 1093.2 110 52.6907 14503 14503 14494 QEplus033719.raw F4 1240.1 926.4 1132.1 835.5 1356.3 1068.5 199 1.58 1 FALSE 0.002973 0.05778 0.12 -250 61631 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAICSGK [R].aAIcSGk.[V] N-Term(TMT6plex); C4(Carbamidomethyl); K7(TMT6plex) 6 A0A0A0MQF6 Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 Q2VWQ4; A0A0A0MQF6; S4R1N5; P16858; S4R1W1; Q4VBD1 GAPDH (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=2 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=2; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm3839 PE=1 SV=1; Gapdh protein OS=Mus musculus OX=10090 GN=Gapdh PE=2 SV=1 0 2 2 0.6705 0 1 1 1 582.84473 1164.68218 1164.6811 0.92 0.00054 0/0 0 0 279383872 HCD 30 MS2 5.82022 813 4.839 52.7005 14506 14506 14505 QEplus033719.raw F4 1050.8 528.2 952.9 987.3 492.9 866 229 2.64 1 FALSE 0.001248 0.01687 0.311 -250 61641 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYLGAECR [R].nYLGAEcR.[T] N-Term(TMT6plex); C7(Carbamidomethyl) 1 Q9JJ28 Protein flightless-1 homolog OS=Mus musculus OX=10090 GN=Flii PE=1 SV=1 Q9JJ28 Protein flightless-1 homolog OS=Mus musculus OX=10090 GN=Flii PE=1 SV=1 0 2 2 0.6714 0 1 1 1 606.30707 1211.60686 1211.60402 2.34 0.00142 0/0 0 0 4566879 HCD 30 MS2 38.13412 749.4 110 52.703 14507 14507 14505 QEplus033719.raw F4 802.7 629.9 855.8 598 826.7 783 111 2.83 1 FALSE 0.0008718 0.01206 0.372 -250 61648 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVPDAK [R].gVPDAk.[I] N-Term(TMT6plex); K6(TMT6plex) 5 A2AM97 Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1 P86048; A0A1B0GXC3; I7HLV2; A2AM97; B7FAU6 60S ribosomal protein L10-like OS=Mus musculus OX=10090 GN=Rpl10l PE=2 SV=1; 60S ribosomal protein L10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=4 SV=1; 60S ribosomal protein L10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=1 SV=1; Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1; Ribosomal protein 10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=4 SV=1 0 2 2 0.2073 0 1 1 1 522.82697 1044.64665 1044.64537 1.23 0.00064 0/0 0 0 77722376 HCD 30 MS2 36.71978 1051.7 12.875 52.7053 14508 14508 14505 QEplus033719.raw F4 1344.9 819.7 1166.8 927.8 1059.7 991.3 207 1.93 1 FALSE 0.005667 0.09533 0.019 -250 61668 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVISPDTR [K].eVISPDTR.[R] N-Term(TMT6plex) 4 Q9DCN2 NADH-cytochrome b5 reductase 3 OS=Mus musculus OX=10090 GN=Cyb5r3 PE=1 SV=3 Q9DCN2-2; Q9DCN2; Q9CY59; F2Z456 Isoform 2 of NADH-cytochrome b5 reductase 3 OS=Mus musculus OX=10090 GN=Cyb5r3; NADH-cytochrome b5 reductase 3 OS=Mus musculus OX=10090 GN=Cyb5r3 PE=1 SV=3; NADH-cytochrome b5 reductase OS=Mus musculus OX=10090 GN=Cyb5r3 PE=2 SV=1; NADH-cytochrome b5 reductase OS=Mus musculus OX=10090 GN=Cyb5r3 PE=1 SV=1 0 2 2 0.4825 0 1 1 1 573.32233 1145.63738 1145.63637 0.88 0.0005 0/0 0 0 17049682 HCD 30 MS2 19.05435 1126.4 95.329 52.712 14511 14511 14505 QEplus033719.raw F4 1305 832.7 1112.7 1037.5 1216.8 1253.4 356 2.57 1 FALSE 0.001142 0.01537 0.328 -250 61674 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGVEIEER [K].dGVEIEER.[A] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.4818 0 1 1 1 588.30994 1175.6126 1175.61055 1.74 0.00102 0/0 0 0 15649117 HCD 30 MS2 10.96358 1133.8 110 52.7146 14512 14512 14505 QEplus033719.raw F4 1318.1 514.3 911.9 1706.9 795 1556.3 208 3.03 2 FALSE 1.14E-05 0.0001456 0.826 -250 61678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CQQPIGTK [R].cQQPIGTk.[S] N-Term(TMT6plex); C1(Carbamidomethyl); K8(TMT6plex) 1 Q543D7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fhl2 PE=1 SV=1 Q543D7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fhl2 PE=1 SV=1 0 2 2 0.6024 0 1 1 1 695.40021 1389.79314 1389.79244 0.5 0.00035 0/0 0 0 13304062 HCD 30 MS2 9.595097 823.1 110 52.7171 14513 14513 14505 QEplus033719.raw F4 823.3 795 942.8 522.8 1064.6 789.9 444 3.32 1 FALSE 1.14E-05 0.0001635 0.816 -250 61683 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVVNNIR [R].eVVNNIR.[R] N-Term(TMT6plex) 3 Q01320 DNA topoisomerase 2-alpha OS=Mus musculus OX=10090 GN=Top2a PE=1 SV=2 Q01320; Q8CCE5; Q3TTG4 DNA topoisomerase 2-alpha OS=Mus musculus OX=10090 GN=Top2a PE=1 SV=2; Toprim domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Top2a PE=2 SV=1; TOP4c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Top2a PE=2 SV=1 0 2 2 0.0674 0 1 1 1 536.82001 1072.63274 1072.63122 1.41 0.00076 0/0 0 0 4501687 HCD 30 MS2 39.09729 908.1 110 52.7196 14514 14514 14505 QEplus033719.raw F4 1036.1 643.6 933.2 765.2 1100 970.3 350 1.78 1 FALSE 0.002586 0.05087 0.139 -250 61691 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTMELAR [R].qTMELAR.[N] N-Term(TMT6plex) 1 Q99NB8 Ubiquilin-4 OS=Mus musculus OX=10090 GN=Ubqln4 PE=1 SV=1 Q99NB8 Ubiquilin-4 OS=Mus musculus OX=10090 GN=Ubqln4 PE=1 SV=1 0 2 2 0.3333 0 1 1 1 539.30164 1077.59599 1077.5924 3.34 0.0018 0/0 0 0 4231985 HCD 30 MS2 29.08852 824.1 110 52.7221 14515 14515 14505 QEplus033719.raw F4 1007.8 627.2 938.3 645.8 827.7 897.8 240 2.07 1 FALSE 0.001343 0.01885 0.291 -250 61697 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAHYNK [R].lAHYNk.[R] N-Term(TMT6plex); K6(TMT6plex) 18 Q64475; Q64525 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3;Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64475; Q8CGP2; Q64525; Q64524; Q8CGP1; P10854; A0JNS9; Q64478; Q8C622; P70696; Q9D2U9; Q8CGP2-2; Q8CBB6; Q6ZWY9; Q8CGP0; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 2-E OS=Mus musculus OX=10090 GN=H2bc21 PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone domain-containing protein OS=Mus musculus OX=10090 GN=H2bc22 PE=2 SV=1; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Histone H2B type 3-A OS=Mus musculus OX=10090 GN=Hist3h2ba PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3; Histone H2B type 3-B OS=Mus musculus OX=10090 GN=H2bu1 PE=1 SV=3; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 0 3 3 0.4785 0 1 1 1 401.91354 1203.72608 1203.72501 0.88 0.00035 0/0 0 0 533272000 HCD 30 MS2 5.141579 397.3 1.951 52.7294 14517 14517 14516 QEplus033719.raw F4 393.9 352.1 477.6 366.2 503.8 290.1 518 3.03 2 FALSE 0.0002814 0.005627 0.487 -250 61707 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STESELK [K].sTESELk.[K] N-Term(TMT6plex); K7(TMT6plex) 3 P70388 DNA repair protein RAD50 OS=Mus musculus OX=10090 GN=Rad50 PE=1 SV=1 P70388; P70388-2; Q5SV02 DNA repair protein RAD50 OS=Mus musculus OX=10090 GN=Rad50 PE=1 SV=1; Isoform 2 of DNA repair protein RAD50 OS=Mus musculus OX=10090 GN=Rad50; DNA repair protein RAD50 OS=Mus musculus OX=10090 GN=Rad50 PE=1 SV=1 0 2 2 0.4444 0 1 1 1 626.36249 1251.7177 1251.71965 -1.56 -0.00098 0/0 0 0 4167843.5 HCD 30 MS2 47.70782 665.8 110 52.7319 14518 14518 14516 QEplus033719.raw F4 671.7 604.1 684.3 554.8 843.9 636.3 253 2.43 1 FALSE 0.003759 0.0713 0.084 -250 61712 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQFVQSAK [K].rQFVQSAk.[E] N-Term(TMT6plex); K8(TMT6plex) 5 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q0V930; Q3UHS6; Q3TBC3; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 1 3 3 0.5981 0 1 1 1 474.62607 1421.86365 1421.8629 0.53 0.00025 0/0 0 0 75383056 HCD 30 MS2 21.30616 740 18.032 52.7342 14519 14519 14516 QEplus033719.raw F4 892.8 613.2 759.6 546.8 913.2 714.3 456 4.23 1 FALSE 1.14E-05 7.99E-08 1.446 -250 61718 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGTGSTATSSGSAGGAVGK [K].eGTGSTATSSGSAGGAVGk.[G] N-Term(TMT6plex); K19(TMT6plex) 5 Q3THW7 Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1 Q8BMZ8; Q3THW7; Q8BTX5; Q5M9L0; Q3TII2 Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1 0 3 3 0.8355 0 1 1 1 680.69244 2040.06278 2040.06095 0.9 0.00061 0/0 0 0 33762968 HCD 30 MS2 0 630.6 110 52.7367 14520 14520 14516 QEplus033719.raw F4 694.6 549.1 697.1 521.1 677.6 643.9 323 6.87 1 FALSE 1.14E-05 6.31E-16 3.098 -250 61728 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHEAEVLK [K].sHEAEVLk.[Q] N-Term(TMT6plex); K8(TMT6plex) 8 Q91XT3 Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1 Q9CXQ8; Q91XT3; Q9DCP3; D3Z5N2; Q9CYU5; Q8C2H3; D3Z1Z8; P54227 Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin (Fragment) OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=2 0 3 3 0.5991 0 1 1 1 457.60648 1370.80487 1370.80439 0.36 0.00016 0/0 0 0 24910694 HCD 30 MS2 17.52537 653.9 45.004 52.7412 14522 14522 14516 QEplus033719.raw F4 760.6 704.2 536 363.2 1083.2 476.4 311 4.59 1 FALSE 1.14E-05 2.72E-06 1.155 -250 61736 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPDASPEPK [K].tPDASPEPk.[D] N-Term(TMT6plex); K9(TMT6plex) 5 Q3TXS7 26S proteasome non-ATPase regulatory subunit 1 OS=Mus musculus OX=10090 GN=Psmd1 PE=1 SV=1 Q05CG9; Q5HZG6; Q8BU34; Q3TXS7; Q8CGI9 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=2; 26S proteasome non-ATPase regulatory subunit 1 OS=Mus musculus OX=10090 GN=Psmd1 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=1 0 2 2 0.4943 0 1 1 1 700.39606 1399.78484 1399.78332 1.09 0.00076 0/0 0 0 19924678 HCD 30 MS2 5.910654 795.3 110 52.7437 14523 14523 14516 QEplus033719.raw F4 865.3 644.7 866.8 750.2 729.2 915.4 354 2.65 1 FALSE 1.14E-05 0.0002858 0.77 -250 61795 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIANQAK [R].dIANQAk.[G] N-Term(TMT6plex); K7(TMT6plex) 12 H3BJU7 Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1 H3BJU7; Q60875-3; H3BKH9; Q60875; Q60875-5; H3BJX8; Q60875-2; Q3TYZ4; H3BJ40; H3BJ45; A0A2X0SFE2; Q60875-4 Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Isoform 3 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=4; Isoform 5 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=2; Isoform 2 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2; Guanine nucleotide exchange factor H1 (Fragment) OS=Mus musculus OX=10090 GN=Arhgef2 PE=2 SV=1; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Guanine nucleotide exchange factor H1 (Fragment) OS=Mus musculus OX=10090 GN=ARHGEF2 PE=4 SV=1; Isoform 4 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2 0 2 2 0.5017 0 1 1 1 609.36615 1217.72502 1217.72541 -0.32 -0.00019 0/0 0 0 21703844 HCD 30 MS2 12.50426 1361.8 110 52.765 14531 14531 14527 QEplus033719.raw F4 1576.8 1006.5 1441.5 1168.3 1651.6 1326.3 497 3.01 1 FALSE 0.0001603 0.003703 0.536 -250 61800 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MENCLGDSR [-K].mENcLGDSR.[H] N-Term(TMT6plex); C4(Carbamidomethyl) 5 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q8CD09; Q9ERG0; Q8C7S2; Q8C3R7; Q8BT15 LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 0 2 2 0.7914 0 1 1 1 655.80621 1310.60515 1310.60304 1.61 0.00106 0/0 0 0 8776934 HCD 30 MS2 8.890036 676.5 110 52.7675 14532 14532 14527 QEplus033719.raw F4 629 513.3 874.8 603.7 580.1 857.9 34 3.02 1 FALSE 7.59E-05 0.002794 0.565 -250 61804 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTPMASSPRPK [R].qTPMASSPRPk.[M] N-Term(TMT6plex); K11(TMT6plex) 9 Q3TEA8 Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1 Q3TEA8; Q3TEA8-3; A2AM63; A2AM70; A2AM62; Z4YKB8; Q3TEA8-2; Q3B7C1; Z4YKA3 Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1; Isoform 3 of Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3; Heterochromatin protein 1-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1; Heterochromatin protein 1-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1; Heterochromatin protein 1-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1; Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1; Isoform 2 of Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3; Heterochromatin protein 1-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Hp1bp3 PE=2 SV=1; Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1 0 3 3 0.6034 0 1 1 1 553.32129 1657.94931 1657.94598 2.01 0.00111 0/0 0 0 42777240 HCD 30 MS2 37.1416 735.1 33.003 52.7723 14534 14534 14527 QEplus033719.raw F4 805.7 695.4 834.2 582.2 756.4 736.7 404 3.48 1 FALSE 5.44E-05 0.002003 0.598 -250 61811 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGGGGGGGPGGFQPAPR [R].gGGGGGGGGPGGFQPAPR.[G] N-Term(TMT6plex) 1 O35295 Transcriptional activator protein Pur-beta OS=Mus musculus OX=10090 GN=Purb PE=1 SV=3 O35295 Transcriptional activator protein Pur-beta OS=Mus musculus OX=10090 GN=Purb PE=1 SV=3 0 3 3 0.8131 0 1 1 1 556.95215 1668.84189 1668.84038 0.91 0.0005 0/0 0 0 14648888 HCD 30 MS2 0 445.5 110 52.7748 14535 14535 14527 QEplus033719.raw F4 478.7 349.2 484.7 370.4 460.1 529.6 186 6.58 1 FALSE 1.14E-05 6.31E-16 3.935 -250 61816 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQFVQSAK [K].rQFVQSAk.[E] N-Term(TMT6plex); K8(TMT6plex) 5 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q0V930; Q3UHS6; Q3TBC3; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 1 2 2 0.3502 0 1 1 1 711.43555 1421.86382 1421.8629 0.64 0.00046 0/0 0 0 13603299 HCD 30 MS2 17.37948 516.2 110 52.7773 14536 14536 14527 QEplus033719.raw F4 542 453.5 531.7 369.8 687.1 513 456 2.17 1 FALSE 3.35E-05 0.001384 0.633 -250 61823 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGTGSTATSSGSAGGAVGK [K].eGTGSTATSSGSAGGAVGk.[G] N-Term(TMT6plex); K19(TMT6plex) 5 Q3THW7 Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1 Q8BMZ8; Q3THW7; Q8BTX5; Q5M9L0; Q3TII2 Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1 0 2 2 0.8042 0 1 1 1 1020.53546 2040.06365 2040.06095 1.32 0.00135 0/0 0 0 10178610 HCD 30 MS2 0 233.4 110 52.7799 14537 14537 14527 QEplus033719.raw F4 251.7 216.9 270 172.6 251.4 237.8 325 6.64 1 FALSE 1.14E-05 6.31E-16 4.715 -250 61841 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSTASQVLQR [K].gSTASQVLQR.[L] N-Term(TMT6plex) 3 Q3THU8 "Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=2 SV=1" Q3THU8; G5E902; Q8VEM8 "Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=2 SV=1; Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=1 SV=1; Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=1 SV=1" 0 3 3 0.4831 0 1 1 1 425.91217 1275.72196 1275.72183 0.1 0.00004 0/0 0 0 47668172 HCD 30 MS2 34.29596 355.4 18.847 52.7917 14541 14541 14538 QEplus033719.raw F4 396.3 275.8 386.5 291.4 356 426.4 396 4.43 1 FALSE 1.14E-05 3.51E-06 1.134 -250 61850 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVCHLQK [R].sVcHLQk.[V] N-Term(TMT6plex); C3(Carbamidomethyl); K7(TMT6plex) 5 Q542G9 Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1 Q9CZI7; B0V2N5; Q99KH3; Q542G9; Q3UCD3 Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1 0 3 3 0.4734 0 1 1 1 443.92896 1329.77231 1329.77131 0.75 0.00033 0/0 0 0 33873948 HCD 30 MS2 40.02981 639.2 25.526 52.7939 14542 14542 14538 QEplus033719.raw F4 719.8 568.5 485.4 652.9 1087.6 321.2 348 3.38 1 FALSE 0.0002218 0.004611 0.511 -250 61856 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALADHSMAQTPR [R].aLADHSMAQTPR.[L] N-Term(TMT6plex) 2 Q9DBG7 Signal recognition particle receptor subunit alpha OS=Mus musculus OX=10090 GN=Srpra PE=1 SV=1 F6VF36; Q9DBG7 Signal recognition particle receptor ('docking protein') (Fragment) OS=Mus musculus OX=10090 GN=Srpr PE=1 SV=1; Signal recognition particle receptor subunit alpha OS=Mus musculus OX=10090 GN=Srpra PE=1 SV=1 0 3 3 0.7425 0 1 1 1 509.60376 1526.79673 1526.79468 1.34 0.00068 0/0 0 0 19102778 HCD 30 MS2 11.52087 765.1 110 52.7964 14543 14543 14538 QEplus033719.raw F4 942.7 562 781.5 658.6 752.5 893.5 268 4.35 1 FALSE 1.14E-05 9.22E-09 1.624 -250 61865 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIYDETQGR [R].aIYDETQGR.[Q] N-Term(TMT6plex) 2 Q6P5D8 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 OS=Mus musculus OX=10090 GN=Smchd1 PE=1 SV=2 A0A3B2W494; Q6P5D8 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Smchd1 PE=1 SV=1; Structural maintenance of chromosomes flexible hinge domain-containing protein 1 OS=Mus musculus OX=10090 GN=Smchd1 PE=1 SV=2 0 2 2 0.3586 0 1 1 1 641.336 1281.66472 1281.66365 0.84 0.00054 0/0 0 0 5643739.5 HCD 30 MS2 42.39233 794.7 110 52.799 14544 14544 14538 QEplus033719.raw F4 759.8 761.4 836.7 606.7 1068.4 735.2 210 2.51 1 FALSE 1.14E-05 0.000817 0.68 -250 61894 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDHALLEEQSK [K].rDHALLEEQSk.[Q] N-Term(TMT6plex); K11(TMT6plex) 5 Q3ULT2 Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1 A0A1L1SVJ6; A0A1L1SV25; Q3UDJ7; Q3ULT2; Q1A602 Alpha-actinin-4 (Fragment) OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Alpha-actinin-4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1 1 3 3 0.6098 0 1 1 1 595.33954 1784.00406 1784.00667 -1.46 -0.00087 0/0 0 0 11478268 HCD 30 MS2 21.36501 886.6 110 52.8087 14548 14548 14538 QEplus033719.raw F4 955 796.6 949.7 708.7 982.3 927.3 397 5.51 1 FALSE 1.14E-05 2.90E-13 2.479 -250 61902 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQSDREYK [K].iQSDREYk.[K] N-Term(TMT6plex); K8(TMT6plex) 8 A0A571BF58; Q61953 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1;Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1 E9Q1W3; A0A571BF58; Q62411; F6RDH3; Q62412; Q61953; A0A571BF46; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=1 SV=8; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 1 3 3 0.4503 0 1 1 1 499.62137 1496.84955 1496.84731 1.5 0.00075 0/0 0 0 14731298 HCD 30 MS2 10.28245 994.9 68.437 52.816 14550 14550 14549 QEplus033719.raw F4 1121.6 321.8 942.4 1566.1 454.4 1562.8 347 1.91 2 FALSE 0.0003408 0.006528 0.467 -250 61903 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQSDREYK [K].lQSDREYk.[K] N-Term(TMT6plex); K8(TMT6plex) 4 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; A0A571BF46; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 1 3 3 0.4503 0 1 2 2 499.62137 1496.84955 1496.84731 1.5 0.00075 0/0 0 0 14731298 HCD 30 MS2 10.28245 994.9 68.437 52.816 14550 14550 14549 QEplus033719.raw F4 1121.6 321.8 942.4 1566.1 454.4 1562.8 347 1.91 1 FALSE 0.0003408 0.006528 0.467 -250 61909 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESFEGSVR [K].eSFEGSVR.[A] N-Term(TMT6plex) 6 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 2 2 0.6293 0 1 1 1 570.29822 1139.58916 1139.58942 -0.23 -0.00013 0/0 0 0 7734811 HCD 30 MS2 38.88781 906.5 110 52.8185 14551 14551 14549 QEplus033719.raw F4 930 791.6 986.4 761.7 1076.2 893.1 100 2.94 1 FALSE 0.0002518 0.005109 0.499 -250 61915 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNLCQK [K].tNLcQk.[I] N-Term(TMT6plex); C4(Carbamidomethyl); K6(TMT6plex) 1 P28474 Alcohol dehydrogenase class-3 OS=Mus musculus OX=10090 GN=Adh5 PE=1 SV=3 P28474 Alcohol dehydrogenase class-3 OS=Mus musculus OX=10090 GN=Adh5 PE=1 SV=3 0 2 2 0.4504 0 1 1 1 611.35468 1221.70207 1221.70256 -0.4 -0.00024 0/0 0 0 10911324 HCD 30 MS2 28.98433 1191.6 110 52.8256 14554 14554 14549 QEplus033719.raw F4 1468.6 852.9 1366.6 1074.5 1220.6 1166.6 370 2.42 1 FALSE 0.002611 0.05165 0.137 -250 61921 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDPIDQCQDSETR [K].cDPIDQcQDSETR.[T] N-Term(TMT6plex); C1(Carbamidomethyl); C7(Carbamidomethyl) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.8677 0 1 1 1 926.90558 1852.80388 1852.80029 1.94 0.00179 0/0 0 0 8243367 HCD 30 MS2 0 352.3 110 52.8281 14555 14555 14549 QEplus033719.raw F4 339 265.5 414.9 441.6 200.2 452.4 18 4.46 3 FALSE 1.14E-05 7.55E-11 2.02 -250 61926 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPPIIHR [R].tPPIIHR.[D] N-Term(TMT6plex) 25 Q6SLK2 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk1 PE=2 SV=1 V9GWU7; P83741-2; E9QM73; Q3UH66-6; E9Q6Q2; E0CZE3; Q3UH66; Q6SLK2; P83741; Q3UH66-2; E9QMI9; E0CYT1; P83741-3; Q80XP9-2; P83741-5; P83741-6; Q3UH66-5; E9QMI8; Q3UH66-4; E9QJQ9; P83741-4; Q3UH66-7; V9GXP7; Q80XP9; Q3UH66-3 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk3 PE=1 SV=1; Isoform 2 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk2 PE=1 SV=1; Isoform 6 of Serine/threonine-protein kinase WNK2 OS=Mus musculus OX=10090 GN=Wnk2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk2 PE=1 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk2 PE=1 SV=1; Serine/threonine-protein kinase WNK2 OS=Mus musculus OX=10090 GN=Wnk2 PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk1 PE=2 SV=1; Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1 PE=1 SV=2; Isoform 2 of Serine/threonine-protein kinase WNK2 OS=Mus musculus OX=10090 GN=Wnk2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk2 PE=1 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk2 PE=1 SV=1; Isoform 3 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1; Isoform 2 of Serine/threonine-protein kinase WNK3 OS=Mus musculus OX=10090 GN=Wnk3; Isoform 5 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1; Isoform 6 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1; Isoform 5 of Serine/threonine-protein kinase WNK2 OS=Mus musculus OX=10090 GN=Wnk2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk2 PE=1 SV=1; Isoform 4 of Serine/threonine-protein kinase WNK2 OS=Mus musculus OX=10090 GN=Wnk2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk2 PE=1 SV=1; Isoform 4 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1; Isoform 7 of Serine/threonine-protein kinase WNK2 OS=Mus musculus OX=10090 GN=Wnk2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk3 PE=1 SV=1; Serine/threonine-protein kinase WNK3 OS=Mus musculus OX=10090 GN=Wnk3 PE=1 SV=3; Isoform 3 of Serine/threonine-protein kinase WNK2 OS=Mus musculus OX=10090 GN=Wnk2 0 3 3 0.5769 0 1 1 1 354.89249 1062.66291 1062.66213 0.73 0.00026 0/0 0 0 7274879 HCD 30 MS2 34.34339 185.1 110 52.8306 14556 14556 14549 QEplus033719.raw F4 198.6 123.9 201.5 145.5 223 217.9 187 2.86 1 FALSE 4.43E-05 0.001613 0.619 -250 61931 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CASQAGMTAYGTR [K].cASQAGMTAYGTR.[R] N-Term(TMT6plex); C1(Carbamidomethyl) 4 Q9DAW9 Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 Q9DAW9; A0A0G2JFI6; Q99JN5; A0A0G2JDV8 Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1; Calponin-3 (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=4; Cnn3 protein (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 0 2 2 0.8345 0 1 1 1 801.88171 1602.75615 1602.75658 -0.27 -0.00021 0/0 0 0 3814050 HCD 30 MS2 0 328.6 110 52.8331 14557 14557 14549 QEplus033719.raw F4 347.3 297.5 379.5 233.1 422.7 291.8 53 4.41 1 FALSE 1.14E-05 1.13E-11 2.176 -250 61940 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDPIDQCQDSETR [K].cDPIDQcQDSETR.[T] N-Term(TMT6plex); C1(Carbamidomethyl); C7(Carbamidomethyl) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.8238 0 1 1 1 618.27228 1852.80228 1852.80029 1.07 0.00066 0/0 0 0 11093141 HCD 30 MS2 42.20226 711 110 52.8382 14559 14559 14549 QEplus033719.raw F4 741.4 615.1 803.7 607 812.5 686.6 18 4.71 3 FALSE 1.14E-05 2.27E-07 1.36 -250 61966 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGESGQSWPR [R].kGESGQSWPR.[L] N-Term(TMT6plex); K1(TMT6plex) 4 Q3TJG6 CS domain-containing protein OS=Mus musculus OX=10090 GN=Ptges3 PE=2 SV=1 D3Z7C6; Q9CRH1; Q3TJG6; Q9R0Q7 Prostaglandin E synthase 3 OS=Mus musculus OX=10090 GN=Ptges3 PE=1 SV=1; CS domain-containing protein OS=Mus musculus OX=10090 GN=Ptges3 PE=2 SV=2; CS domain-containing protein OS=Mus musculus OX=10090 GN=Ptges3 PE=2 SV=1; Prostaglandin E synthase 3 OS=Mus musculus OX=10090 GN=Ptges3 PE=1 SV=1 1 3 3 0.6317 0 1 1 1 530.63141 1589.87967 1589.88001 -0.21 -0.00011 0/0 0 0 34941644 HCD 30 MS2 31.81526 1056.1 31.95 52.8525 14564 14564 14560 QEplus033719.raw F4 1064.1 993.4 1181.7 828.9 1128 1140.7 379 3.34 1 FALSE 1.14E-05 1.74E-05 1.002 -250 61974 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGTLTMNR [K].tGTLTMNR.[M] N-Term(TMT6plex) 9 Q6Q477; G5E829 Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1;Plasma membrane calcium-transporting ATPase 1 OS=Mus musculus OX=10090 GN=Atp2b1 PE=1 SV=1 Q6Q477-2; Q6Q477; Q8K314; D1FNM9; D1FNM8; H2BL43; E9Q828; F7AAP4; G5E829 Isoform 2 of Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4; Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1; Atp2b1 protein (Fragment) OS=Mus musculus OX=10090 GN=Atp2b1 PE=2 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=2 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=2 SV=2; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=2 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1; Plasma membrane calcium-transporting ATPase 1 OS=Mus musculus OX=10090 GN=Atp2b1 PE=1 SV=1 0 2 2 0.3993 0 1 1 1 561.81152 1122.61577 1122.61386 1.7 0.00096 0/0 0 0 32845766 HCD 30 MS2 35.12574 737 29.652 52.8548 14565 14565 14560 QEplus033719.raw F4 854.4 579.4 828.2 631 689.2 839.6 197 2.83 2 FALSE 1.14E-05 0.0002484 0.781 -250 61983 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSQDAGGFGPEDR [R].dSQDAGGFGPEDR.[L] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.8756 0 1 1 1 527.24457 1579.71915 1579.71859 0.35 0.00019 0/0 0 0 16310882 HCD 30 MS2 20.75271 566.3 84.429 52.857 14566 14566 14560 QEplus033719.raw F4 646.5 406.1 611.8 547.8 514.8 670.7 23 6.11 2 FALSE 1.14E-05 6.80E-13 2.409 -250 62005 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YTCQELQR [K].yTcQELQR.[L] N-Term(TMT6plex); C3(Carbamidomethyl) 2 Q8BKT7 THO complex subunit 5 homolog OS=Mus musculus OX=10090 GN=Thoc5 PE=1 SV=2 Q8BKT7; A0A0R4J0J6 THO complex subunit 5 homolog OS=Mus musculus OX=10090 GN=Thoc5 PE=1 SV=2; THO complex subunit 5 homolog OS=Mus musculus OX=10090 GN=Thoc5 PE=1 SV=1 0 2 2 0.5362 0 1 1 1 663.83942 1326.67156 1326.66735 3.17 0.0021 0/0 0 0 7489588.5 HCD 30 MS2 0 475.9 110 52.8641 14569 14569 14560 QEplus033719.raw F4 470.4 429.7 548 388.7 536.8 481.8 152 3.04 1 FALSE 0.003182 0.06261 0.107 -250 62017 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDEELNK [R].nDEELNk.[L] N-Term(TMT6plex); K7(TMT6plex) 14 Q149V4; Q8BFU2; P27661 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1;Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3;Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 Q149V4; Q8BFU2; Q64522; C0HKE5; Q8CGP5; A0AUV1; Q8CGP4; Q8R1M2; P27661; A0A0N4SV66; Q64426; Q8CGP7; Q8CGP6; Q6GSS7 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1; Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3; Histone H2A type 2-B OS=Mus musculus OX=10090 GN=H2ac21 PE=1 SV=3; Histone H2A type 1-G OS=Mus musculus OX=10090 GN=H2ac11 PE=1 SV=1; Histone H2A type 1-F OS=Mus musculus OX=10090 GN=Hist1h2af PE=1 SV=3; Histone H2A (Fragment) OS=Mus musculus OX=10090 GN=H2ac12 PE=2 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2ac1 PE=1 SV=1; Histone H2A.J OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2; Histone H2A OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A (Fragment) OS=Mus musculus domesticus OX=10092 GN=H2A PE=2 SV=1; Histone H2A type 1-K OS=Mus musculus OX=10090 GN=H2ac15 PE=1 SV=3; Histone H2A type 1-H OS=Mus musculus OX=10090 GN=H2ac12 PE=1 SV=3; Histone H2A type 2-A OS=Mus musculus OX=10090 GN=Hist2h2aa1 PE=1 SV=3 0 2 2 0.505 0 1 1 1 660.36462 1319.72197 1319.72072 0.95 0.00063 0/0 0 0 694453760 HCD 30 MS2 4.918008 970.2 3.227 52.8739 14572 14572 14571 QEplus033719.raw F4 1089.4 1115.8 938.8 601.2 1463.7 612.1 370 2.99 3 FALSE 0.001744 0.0299 0.217 -250 62024 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LETYNDESR [K].lETYNDESR.[I] N-Term(TMT6plex) 3 Q5SWN2 Replication protein A subunit OS=Mus musculus OX=10090 GN=Rpa1 PE=1 SV=2 Q5SWN2; Q8VEE4; Q3U8B3 Replication protein A subunit OS=Mus musculus OX=10090 GN=Rpa1 PE=1 SV=2; Replication protein A 70 kDa DNA-binding subunit OS=Mus musculus OX=10090 GN=Rpa1 PE=1 SV=1; Replication protein A subunit OS=Mus musculus OX=10090 GN=Rpa1 PE=2 SV=1 0 2 2 0.5055 0 1 1 1 678.33582 1355.66435 1355.66404 0.23 0.00016 0/0 0 0 5899578.5 HCD 30 MS2 0 314.8 110 52.8764 14573 14573 14571 QEplus033719.raw F4 349.7 263.4 294.3 195.4 502.1 283.8 97 3.62 1 FALSE 1.14E-05 0.0007368 0.689 -250 62031 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDEELNK [R].nDEELNk.[L] N-Term(TMT6plex); K7(TMT6plex) 14 Q149V4; Q8BFU2; P27661 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1;Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3;Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 Q149V4; Q8BFU2; Q64522; C0HKE5; Q8CGP5; A0AUV1; Q8CGP4; Q8R1M2; P27661; A0A0N4SV66; Q64426; Q8CGP7; Q8CGP6; Q6GSS7 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1; Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3; Histone H2A type 2-B OS=Mus musculus OX=10090 GN=H2ac21 PE=1 SV=3; Histone H2A type 1-G OS=Mus musculus OX=10090 GN=H2ac11 PE=1 SV=1; Histone H2A type 1-F OS=Mus musculus OX=10090 GN=Hist1h2af PE=1 SV=3; Histone H2A (Fragment) OS=Mus musculus OX=10090 GN=H2ac12 PE=2 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2ac1 PE=1 SV=1; Histone H2A.J OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2; Histone H2A OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A (Fragment) OS=Mus musculus domesticus OX=10092 GN=H2A PE=2 SV=1; Histone H2A type 1-K OS=Mus musculus OX=10090 GN=H2ac15 PE=1 SV=3; Histone H2A type 1-H OS=Mus musculus OX=10090 GN=H2ac12 PE=1 SV=3; Histone H2A type 2-A OS=Mus musculus OX=10090 GN=Hist2h2aa1 PE=1 SV=3 0 3 3 0.567 0 1 1 1 440.57864 1319.72138 1319.72072 0.5 0.00022 0/0 0 0 162649888 HCD 30 MS2 19.15874 587.7 7.726 52.8787 14574 14574 14571 QEplus033719.raw F4 704.5 527.1 559.1 404.8 856 474.9 370 2.61 3 FALSE 0.004122 0.07575 0.073 -250 62039 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHEAEVLK [K].sHEAEVLk.[Q] N-Term(TMT6plex); K8(TMT6plex) 8 Q91XT3 Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1 Q9CXQ8; Q91XT3; Q9DCP3; D3Z5N2; Q9CYU5; Q8C2H3; D3Z1Z8; P54227 Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin (Fragment) OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=2 0 2 2 0.487 0 1 1 1 685.90649 1370.80571 1370.80439 0.97 0.00066 0/0 0 0 28372362 HCD 30 MS2 17.60379 849.7 75.364 52.881 14575 14575 14571 QEplus033719.raw F4 861.8 930.8 667.2 319.2 1838.1 480.9 311 3.45 1 FALSE 1.14E-05 0.0001489 0.824 -250 62048 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATVAPDK [R].aTVAPDk.[K] N-Term(TMT6plex); K7(TMT6plex) 6 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 Q8BTR1; B9EIU1; Q3TMX9; Q3UGD4; Q8CGC7; Q9CRF9 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=2; Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; GST_C domain-containing protein OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; GST_C domain-containing protein OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=3 0 2 2 0.2949 0 1 1 1 580.35834 1159.7094 1159.70869 0.61 0.00035 0/0 0 0 18807420 HCD 30 MS2 61.59489 1643.7 78.91 52.8832 14576 14576 14571 QEplus033719.raw F4 1899.5 1119.6 1591.8 1805 1604.8 1841.5 397 2.34 1 FALSE 0.003575 0.06844 0.092 -250 62057 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVCHLQK [R].sVcHLQk.[V] N-Term(TMT6plex); C3(Carbamidomethyl); K7(TMT6plex) 5 Q542G9 Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1 Q9CZI7; B0V2N5; Q99KH3; Q542G9; Q3UCD3 Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1 0 2 2 0.4421 0 1 1 1 665.38953 1329.77178 1329.77131 0.35 0.00023 0/0 0 0 6674880 HCD 30 MS2 0 710 110 52.8857 14577 14577 14571 QEplus033719.raw F4 649.6 626.1 475.3 825 1384.9 299.2 364 3.28 1 FALSE 0.0001813 0.003979 0.528 -250 62066 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLQAVHR [K].vLQAVHR.[G] N-Term(TMT6plex) 3 Q6IM74 Reticulon OS=Mus musculus OX=10090 GN=Rtn2 PE=2 SV=1 Q6IM75; Q6IM74; Q3TUZ6 Reticulon OS=Mus musculus OX=10090 GN=Rtn2 PE=2 SV=1; Reticulon OS=Mus musculus OX=10090 GN=Rtn2 PE=2 SV=1; Reticulon OS=Mus musculus OX=10090 GN=Rtn2 PE=2 SV=1 0 3 3 0.4202 0 1 1 1 351.22473 1051.65964 1051.65738 2.15 0.00075 0/0 0 0 4432855 HCD 30 MS2 73.8721 264.1 110 52.8882 14578 14578 14571 QEplus033719.raw F4 253.8 168.3 253.5 255.6 279.4 374.3 51 3.26 1 FALSE 1.14E-05 0.0006152 0.704 -250 62076 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGESGQSWPR [R].kGESGQSWPR.[L] N-Term(TMT6plex); K1(TMT6plex) 4 Q3TJG6 CS domain-containing protein OS=Mus musculus OX=10090 GN=Ptges3 PE=2 SV=1 D3Z7C6; Q9CRH1; Q3TJG6; Q9R0Q7 Prostaglandin E synthase 3 OS=Mus musculus OX=10090 GN=Ptges3 PE=1 SV=1; CS domain-containing protein OS=Mus musculus OX=10090 GN=Ptges3 PE=2 SV=2; CS domain-containing protein OS=Mus musculus OX=10090 GN=Ptges3 PE=2 SV=1; Prostaglandin E synthase 3 OS=Mus musculus OX=10090 GN=Ptges3 PE=1 SV=1 1 2 2 0.625 0 1 1 1 795.44379 1589.8803 1589.88001 0.18 0.00014 0/0 0 0 3796587.75 HCD 30 MS2 0 242.3 110 52.8908 14579 14579 14571 QEplus033719.raw F4 251.9 234.9 259.2 191.4 277.8 238.8 377 2.24 1 FALSE 1.14E-05 0.0006357 0.702 -250 62082 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDHALLEEQSK [K].rDHALLEEQSk.[Q] N-Term(TMT6plex); K11(TMT6plex) 5 Q3ULT2 Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1 A0A1L1SVJ6; A0A1L1SV25; Q3UDJ7; Q3ULT2; Q1A602 Alpha-actinin-4 (Fragment) OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Alpha-actinin-4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1 1 2 2 0.7003 0 1 1 1 892.50702 1784.00676 1784.00667 0.05 0.00005 0/0 0 0 3752291.75 HCD 30 MS2 0 196 110 52.8933 14580 14580 14571 QEplus033719.raw F4 200.2 212 208.9 129.9 248.2 176.8 400 3.57 1 FALSE 1.14E-05 5.61E-09 1.665 -250 62088 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TMTNALR [R].tMTNALR.[K] N-Term(TMT6plex) 5 Q3ULJ5 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 Q3ULJ5; Q3U5M8; F7B7L8; P14685; Q8BK46 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 3 (Fragment) OS=Mus musculus OX=10090 GN=Psmd3 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus OX=10090 GN=Psmd3 PE=1 SV=3; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 0 2 2 0.2273 0 1 1 1 518.29645 1035.58562 1035.58183 3.66 0.00189 0/0 0 0 18947966 HCD 30 MS2 55.85555 1261.7 54.512 52.8955 14581 14581 14571 QEplus033719.raw F4 2131.1 788.8 1264.1 986.4 872.5 1527.5 203 2.42 1 FALSE 0.0006126 0.009021 0.421 -250 62106 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVSAQLR [K].tAVSAQLR.[A] N-Term(TMT6plex) 2 Q6P5E4 UDP-glucose:glycoprotein glucosyltransferase 1 OS=Mus musculus OX=10090 GN=Uggt1 PE=1 SV=4 Q6P5E4; Q8BWM7 UDP-glucose:glycoprotein glucosyltransferase 1 OS=Mus musculus OX=10090 GN=Uggt1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Uggt1 PE=2 SV=1 0 2 2 0.2968 0 1 1 1 537.82788 1074.64849 1074.64687 1.5 0.00081 0/0 0 0 33364138 HCD 30 MS2 31.58341 688.3 41.411 52.9051 14584 14584 14582 QEplus033719.raw F4 719.3 591.3 764 558.8 749.5 747 200 2.19 1 FALSE 0.00079 0.01093 0.389 -250 62135 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SALDQYR [R].sALDQYR.[A] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.2308 0 1 1 1 541.29675 1081.58623 1081.58394 2.12 0.00115 0/0 0 0 61417696 HCD 30 MS2 3.002177 758.7 24.036 52.9119 14587 14587 14582 QEplus033719.raw F4 764 693.2 886 663.6 767.6 777.6 184 2.34 2 FALSE 0.001101 0.01427 0.342 -250 62141 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVSAQLR [K].tAVSAQLR.[A] N-Term(TMT6plex) 2 Q6P5E4 UDP-glucose:glycoprotein glucosyltransferase 1 OS=Mus musculus OX=10090 GN=Uggt1 PE=1 SV=4 Q6P5E4; Q8BWM7 UDP-glucose:glycoprotein glucosyltransferase 1 OS=Mus musculus OX=10090 GN=Uggt1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Uggt1 PE=2 SV=1 0 2 2 0.2436 0 1 1 1 537.82788 1074.64849 1074.64687 1.5 0.00081 0/0 0 0 33364138 HCD 30 MS2 32.3346 688.3 36.408 52.9141 14588 14588 14582 QEplus033719.raw F4 719.3 591.3 764 558.8 749.5 747 200 2.34 1 FALSE 0.0001603 0.003567 0.54 -250 62151 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MATGLER [R].mATGLER.[M] N-Term(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; Q9D0E1-2; Q3TQ66; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 2 2 0.2972 0 1 1 1 503.78033 1006.55339 1006.55528 -1.88 -0.00094 0/0 0 0 17043160 HCD 30 MS2 59.04202 1056.3 41.166 52.9164 14589 14589 14582 QEplus033719.raw F4 1174.6 977.1 1254 720.1 1020.9 1191 263 2.12 1 FALSE 0.001395 0.01989 0.282 -250 62164 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVAFQNSQTR [K].aVAFQNSQTR.[I] N-Term(TMT6plex) 2 Q9DB77 "Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrc2 PE=1 SV=1" A0A140LI98; Q9DB77 "Cytochrome b-c1 complex subunit 2, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Uqcrc2 PE=1 SV=1; Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrc2 PE=1 SV=1" 0 2 2 0.6264 0 1 1 1 675.87091 1350.73454 1350.73273 1.34 0.00091 0/0 0 0 13909842 HCD 30 MS2 14.64065 838.6 110 52.9212 14591 14591 14582 QEplus033719.raw F4 881.7 652.9 907.5 932.4 639.9 1017.3 416 3.56 1 FALSE 1.14E-05 2.03E-07 1.369 -250 62174 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNTTPTGAAPPAGMTSTR [K].rNTTPTGAAPPAGMTSTR.[V] N-Term(TMT6plex) 10 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; A0A0G2JFT4; A0A0G2JG35; A0A140T8T5; P27546-3; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 1 3 3 0.7974 0 1 1 1 672.68896 2016.05234 2016.04939 1.47 0.00098 0/0 0 0 10585627 HCD 30 MS2 0 189.6 110 52.9237 14592 14592 14582 QEplus033719.raw F4 210 150.8 191.7 160.9 221.3 202.7 308 6.12 2 FALSE 1.14E-05 6.31E-16 3.123 -250 62178 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAEGVPK [R].aAEGVPk.[L] N-Term(TMT6plex); K7(TMT6plex) 6 E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" A0A087WS16; D3YWD1; J3QQ16; Q9Z0I9; O88493; E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen, type VI, alpha 3 (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen alpha3(VI) (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Type VI collagen alpha 3 subunit OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" 0 2 2 0.4256 0 1 1 1 565.35315 1129.69902 1129.69813 0.79 0.00045 0/0 0 0 16050442 HCD 30 MS2 41.40741 1781.3 110 52.931 14594 14594 14593 QEplus033719.raw F4 2087.2 1318.5 1543.7 1820.3 2020.8 1897.4 247 1.95 1 FALSE 0.004098 0.07546 0.073 -250 62192 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPATSYVR [R].kPATSYVR.[T] N-Term(TMT6plex); K1(TMT6plex) 3 Q5M9N5 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1 Q5M9N5; F6Z0X0; Q5M9J8 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1; 60S ribosomal protein L28 (Fragment) OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1; 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1 0 3 3 0.4383 0 1 1 1 460.61893 1379.84223 1379.84111 0.81 0.00037 0/0 0 0 61811644 HCD 30 MS2 17.33137 800.4 21.499 52.938 14597 14597 14593 QEplus033719.raw F4 870.3 720.3 884.6 658.9 827.6 841 296 3.24 1 FALSE 1.14E-05 0.0002306 0.788 -250 62216 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GESFYQDR [R].gESFYQDR.[M] N-Term(TMT6plex) 3 Q9D0I9 "Arginine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Rars1 PE=1 SV=2" Q3UAZ3; Q3TVC5; Q9D0I9 "Arginine--tRNA ligase (Fragment) OS=Mus musculus OX=10090 GN=Rars PE=2 SV=1; Arginine--tRNA ligase, cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Rars PE=2 SV=1; Arginine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Rars1 PE=1 SV=2" 0 2 2 0.6166 0 1 1 1 615.80267 1230.59807 1230.59523 2.31 0.00142 0/0 0 0 26012374 HCD 30 MS2 7.586058 1015.6 110 52.945 14600 14600 14593 QEplus033719.raw F4 1103.5 846.1 1145.1 928.1 1023.6 1047.1 55 3.26 1 FALSE 1.14E-05 0.0002937 0.767 -250 62241 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTFEEAEK [R].hTFEEAEk.[G] N-Term(TMT6plex); K8(TMT6plex) 2 Q9JLN9 Serine/threonine-protein kinase mTOR OS=Mus musculus OX=10090 GN=Mtor PE=1 SV=2 Q9JLN9; Q3T9E1 Serine/threonine-protein kinase mTOR OS=Mus musculus OX=10090 GN=Mtor PE=1 SV=2; Serine/threonine-protein kinase mTOR OS=Mus musculus OX=10090 GN=Mtor PE=2 SV=1 0 3 3 0.6427 0 1 1 1 483.59738 1448.77759 1448.77857 -0.67 -0.00032 0/0 0 0 8673024 HCD 30 MS2 16.63624 767.3 110 52.9523 14603 14603 14593 QEplus033719.raw F4 773.2 580.7 864.4 678.3 759.1 948 297 4.03 1 FALSE 1.14E-05 2.85E-05 0.961 -250 62255 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CNEGYEVAPDGR [R].cNEGYEVAPDGR.[T] N-Term(TMT6plex); C1(Carbamidomethyl) 2 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 0 2 2 0.8405 0 1 1 1 798.37012 1595.73296 1595.73214 0.51 0.00041 0/0 0 0 12296609 HCD 30 MS2 0 365.7 110 52.9621 14606 14606 14604 QEplus033719.raw F4 363 243.5 435.8 557.1 162.8 431.8 39 4.89 1 FALSE 1.14E-05 1.63E-10 1.957 -250 62260 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SALEAAHK [R].sALEAAHk.[G] N-Term(TMT6plex); K8(TMT6plex) 1 P28474 Alcohol dehydrogenase class-3 OS=Mus musculus OX=10090 GN=Adh5 PE=1 SV=3 P28474 Alcohol dehydrogenase class-3 OS=Mus musculus OX=10090 GN=Adh5 PE=1 SV=3 0 3 3 0.4302 0 1 1 1 428.92786 1284.76902 1284.76761 1.1 0.00047 0/0 0 0 64647600 HCD 30 MS2 27.30911 463.6 16.59 52.9643 14607 14607 14604 QEplus033719.raw F4 512.1 340.9 465.6 489.3 557.8 416.2 299 3.58 1 FALSE 1.14E-05 0.0001435 0.827 -250 62268 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQATEVR [R].lQATEVR.[I] N-Term(TMT6plex) 3 Q9DCG9 Multifunctional methyltransferase subunit TRM112-like protein OS=Mus musculus OX=10090 GN=Trmt112 PE=1 SV=1 Q9DCG9; Q8VCR4; Q5M8M3 Multifunctional methyltransferase subunit TRM112-like protein OS=Mus musculus OX=10090 GN=Trmt112 PE=1 SV=1; Multifunctional methyltransferase subunit TRM112-like protein OS=Mus musculus OX=10090 GN=Trmt112 PE=1 SV=1; Multifunctional methyltransferase subunit TRM112-like protein OS=Mus musculus OX=10090 GN=Trmt112 PE=2 SV=1 0 2 2 0.1659 0 1 1 1 523.31451 1045.62175 1045.62032 1.36 0.00071 0/0 0 0 46570060 HCD 30 MS2 58.04935 793.5 14.447 52.9666 14608 14608 14604 QEplus033719.raw F4 954.5 616.9 894.6 721.1 690.2 883.4 299 2.05 1 FALSE 0.0007816 0.01086 0.391 -250 62276 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHDENLRK [K].iHDENLRk.[Q] N-Term(TMT6plex); K8(TMT6plex) 3 Q5SUF2 Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1 Q5SUF2-2; Q5SUF2-3; Q5SUF2 Isoform 2 of Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3; Isoform 3 of Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3; Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1 1 4 4 0.3798 0 1 1 1 371.47559 1482.88051 1482.87928 0.83 0.00031 0/0 0 0 24045756 HCD 30 MS2 10.06596 397.5 48.486 52.9688 14609 14609 14604 QEplus033719.raw F4 420.8 365 403.1 276.1 518.3 401.6 318 2.58 1 FALSE 1.14E-05 0.0003276 0.758 -250 62295 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLSDSESDDSK [K].sLSDSESDDSk.[S] N-Term(TMT6plex); K11(TMT6plex) 5 Q9DCC5 Cbx3 protein OS=Mus musculus OX=10090 GN=Cbx3 PE=1 SV=1 Q9DCC5; Q32P00; D3Z313; I6L9I7; P23198 Cbx3 protein OS=Mus musculus OX=10090 GN=Cbx3 PE=1 SV=1; Chromobox homolog 3 (Drosophila HP1 gamma) OS=Mus musculus OX=10090 GN=Cbx3 PE=2 SV=1; Chromobox protein homolog 3 (Fragment) OS=Mus musculus OX=10090 GN=Cbx3 PE=1 SV=1; Cbx3 protein OS=Mus musculus OX=10090 GN=Cbx3 PE=2 SV=1; Chromobox protein homolog 3 OS=Mus musculus OX=10090 GN=Cbx3 PE=1 SV=2 0 2 2 0.7634 0 1 1 1 814.40778 1627.80828 1627.8063 1.22 0.00099 0/0 0 0 22381624 HCD 30 MS2 6.699076 782.3 110 52.9739 14611 14611 14604 QEplus033719.raw F4 751.7 991.1 797.9 465.1 1165.9 522.1 135 4.1 1 FALSE 1.14E-05 1.87E-09 1.755 -250 62300 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVTDRETGSSK [R].iVTDRETGSSk.[G] N-Term(TMT6plex); K11(TMT6plex) 6 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 1 3 3 0.5471 0 1 1 1 550.98621 1650.94406 1650.94267 0.84 0.00046 0/0 0 0 21229714 HCD 30 MS2 5.855448 1125.3 91.98 52.9762 14612 14612 14604 QEplus033719.raw F4 1236.2 1159 1162.8 723.2 1462.3 1008.4 457 2.76 1 FALSE 1.14E-05 0.0002915 0.768 -250 62307 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAQQQEDQEQKDEESEEK [R].aAQQQEDQEQkDEESEEk.[A] N-Term(TMT6plex); K11(TMT6plex); K18(TMT6plex) 1 Q61249 Immunoglobulin-binding protein 1 OS=Mus musculus OX=10090 GN=Igbp1 PE=1 SV=1 Q61249 Immunoglobulin-binding protein 1 OS=Mus musculus OX=10090 GN=Igbp1 PE=1 SV=1 1 4 4 0.8093 0 1 1 1 709.85614 2836.40273 2836.40515 -0.85 -0.0006 0/0 0 0 6353819 HCD 30 MS2 0 194.2 110 52.9787 14613 14613 14604 QEplus033719.raw F4 195 173.4 219.4 159.8 188.3 229.5 281 7.34 1 FALSE 1.14E-05 4.26E-15 2.827 -250 62311 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTQPPPLQAAHR [K].kTQPPPLQAAHR.[A] N-Term(TMT6plex); K1(TMT6plex) 8 E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" Q66K11; Q80VJ0; A0A087WS16; Q99K31; Q6PES2; J3QQ16; O88493; E9PWQ3 "Col6a3 protein (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Col6a3 protein OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=2; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Col6a3 protein (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Col6a3 protein OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Type VI collagen alpha 3 subunit OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" 1 4 4 0.3806 0 1 1 1 451.27472 1802.07705 1802.08011 -1.7 -0.00077 0/0 0 0 2826151.75 HCD 30 MS2 47.54118 99.966 52.981 14614 14614 14604 QEplus033719.raw F4 365 2.89 1 FALSE 0.0005373 0.008196 0.435 -250 62334 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQESFK [K].gQESFk.[K] N-Term(TMT6plex); K6(TMT6plex) 7 Q5SQB7 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1 Q5SQB7; Q5SQB0; Q5BL09; Q5U438; Q9DAY9; Q5SQB5; Q3U536 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Npm1 protein OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1 0 2 2 0.2599 0 1 1 1 577.33527 1153.66326 1153.66174 1.31 0.00076 0/0 0 0 103584296 HCD 30 MS2 11.30458 1123.5 12.92 52.993 14618 14618 14615 QEplus033719.raw F4 1311.2 1059.2 1157.8 763.5 1562.1 887 269 1.77 1 FALSE 0.008087 0.1364 -0.069 -250 62342 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPLVCGR [R].nPLVcGR.[G] N-Term(TMT6plex); C5(Carbamidomethyl) 3 P37889 Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 P37889-2; Q99K58; P37889 Isoform 2 of Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2; Fibulin 2 OS=Mus musculus OX=10090 GN=Fbln2 PE=2 SV=1; Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 0 2 2 0.5101 0 1 1 1 522.79553 1044.58379 1044.58217 1.55 0.00081 0/0 0 0 50843720 HCD 30 MS2 42.76289 697.7 16.809 52.9953 14619 14619 14615 QEplus033719.raw F4 805.4 555.5 797 670.9 650.7 706.5 270 1.98 1 FALSE 0.001685 0.02771 0.228 -250 62358 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVPHQMAH [K].lVPHQMAH.[-] N-Term(TMT6plex) 2 P19536 "Cytochrome c oxidase subunit 5B, mitochondrial OS=Mus musculus OX=10090 GN=Cox5b PE=1 SV=1" P19536; Q9D881 "Cytochrome c oxidase subunit 5B, mitochondrial OS=Mus musculus OX=10090 GN=Cox5b PE=1 SV=1; Cytochrome c oxidase polypeptide Vb OS=Mus musculus OX=10090 GN=Cox5b-ps PE=1 SV=1" 0 3 3 0.6274 0 1 1 1 387.88507 1161.64066 1161.64001 0.56 0.00021 0/0 0 0 34629964 HCD 30 MS2 25.08586 327.7 25.922 52.9998 14621 14621 14615 QEplus033719.raw F4 309.3 237.7 362.6 311 302.5 443.1 320 3.14 1 FALSE 1.14E-05 1.04E-05 1.044 -250 62378 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDVNEAIR [K].eDVNEAIR.[L] N-Term(TMT6plex) 3 Q3UDI8 DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=2 SV=1 Q3UDI8; Q61881; Q3V122 DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=2 SV=1; DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=1 SV=1; DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=2 SV=1 0 2 2 0.2099 0 1 1 1 587.81842 1174.62956 1174.62653 2.58 0.00152 0/0 0 0 8717179 HCD 30 MS2 11.41189 946.1 110 53.0068 14624 14624 14615 QEplus033719.raw F4 1110.5 904.7 910.2 593.8 1337.9 819.7 222 2.62 1 FALSE 4.43E-05 0.001694 0.614 -250 62406 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAEFTVETR [K].rAEFTVETR.[S] N-Term(TMT6plex) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; B7FAV1; F6XC15; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 1 3 3 0.594 0 1 1 1 446.58463 1337.73932 1337.73748 1.38 0.00061 0/0 0 0 97802472 HCD 30 MS2 29.22418 307.3 13.227 53.0211 14629 14629 14626 QEplus033719.raw F4 338.4 245.7 370.7 241.8 297 350.2 342 4.63 1 FALSE 1.14E-05 3.47E-07 1.325 -250 62414 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVPNWHR [K].nVPNWHR.[D] N-Term(TMT6plex) 3 Q3ULW0 GTP-binding nuclear protein Ran OS=Mus musculus OX=10090 GN=Ran PE=2 SV=1 Q3ULW0; Q14AA6; P62827 GTP-binding nuclear protein Ran OS=Mus musculus OX=10090 GN=Ran PE=2 SV=1; GTP-binding nuclear protein Ran OS=Mus musculus OX=10090 GN=1700009N14Rik PE=1 SV=1; GTP-binding nuclear protein Ran OS=Mus musculus OX=10090 GN=Ran PE=1 SV=3 0 3 3 0.5786 0 1 1 1 384.54749 1151.6279 1151.62714 0.66 0.00025 0/0 0 0 65630816 HCD 30 MS2 46.30087 267 16.133 53.0234 14630 14630 14626 QEplus033719.raw F4 282.1 228.4 283 240.2 310.8 257.3 234 3.18 1 FALSE 0.0001504 0.003272 0.549 -250 62430 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPATSYVR [R].kPATSYVR.[T] N-Term(TMT6plex); K1(TMT6plex) 3 Q5M9N5 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1 Q5M9N5; F6Z0X0; Q5M9J8 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1; 60S ribosomal protein L28 (Fragment) OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1; 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1 0 2 2 0.2663 0 1 1 1 690.42468 1379.84209 1379.84111 0.71 0.00049 0/0 0 0 20772850 HCD 30 MS2 35.67118 789.5 110 53.0282 14632 14632 14626 QEplus033719.raw F4 772.8 709.3 899.2 685.7 853.3 816.5 301 1.99 1 FALSE 0.003464 0.06714 0.095 -250 62438 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RWIHEDVER [K].rWIHEDVER.[Q] N-Term(TMT6plex) 5 Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 Q3UG11; G3UY49; G3UWR0; Q3TQD1; Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=1 SV=2; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 1 4 4 0.6404 0 1 1 1 367.95221 1468.78701 1468.78583 0.8 0.0003 0/0 0 0 14201816 HCD 30 MS2 54.68501 531 46.395 53.0304 14633 14633 14626 QEplus033719.raw F4 417.5 450.2 715.2 506.2 486.9 609.7 285 3.42 1 FALSE 1.14E-05 0.0003358 0.756 -250 62445 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RWIHEDVER [K].rWIHEDVER.[Q] N-Term(TMT6plex) 5 Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 Q3UG11; G3UY49; G3UWR0; Q3TQD1; Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=1 SV=2; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 1 3 3 0.6628 0 1 1 1 490.26804 1468.78955 1468.78583 2.54 0.00124 0/0 0 0 10417864 HCD 30 MS2 33.32177 835.5 110 53.0329 14634 14634 14626 QEplus033719.raw F4 856.1 751.3 991.1 604.3 851.3 959.2 303 3.47 1 FALSE 1.14E-05 4.88E-05 0.916 -250 62450 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DMSAQATGK [K].dMSAQATGk.[N] N-Term(TMT6plex); K9(TMT6plex) 6 Q6XMP4 Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1 Q6XMP4; Q8R346; Q8BGQ7; Q6PDM7; Q3TZ32; Q3UD67 "Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=2; Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1" 0 2 2 0.6101 0 1 1 1 683.87451 1366.74175 1366.74007 1.23 0.00084 0/0 0 0 7196492 HCD 30 MS2 19.02309 745.3 110 53.0354 14635 14635 14626 QEplus033719.raw F4 849.7 636 784.3 543.8 973.5 684.7 350 3.36 1 FALSE 1.14E-05 2.17E-06 1.174 -250 62457 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGNSLTSEQQK [K].dGNSLTSEQQk.[Y] N-Term(TMT6plex); K11(TMT6plex) 1 Q91V01 Lysophospholipid acyltransferase 5 OS=Mus musculus OX=10090 GN=Lpcat3 PE=1 SV=1 Q91V01 Lysophospholipid acyltransferase 5 OS=Mus musculus OX=10090 GN=Lpcat3 PE=1 SV=1 0 3 3 0.6555 0 1 1 1 555.63391 1664.88718 1664.88555 0.98 0.00054 0/0 0 0 6507546.5 HCD 30 MS2 0 437.1 110 53.0379 14636 14636 14626 QEplus033719.raw F4 419.4 349.1 444.7 417.8 459.9 531.4 358 4.79 1 FALSE 1.14E-05 5.21E-07 1.291 -250 62463 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMQEMIAR [R].rMQEMIAR.[M] N-Term(TMT6plex) 3 P42208 Septin-2 OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=2 G3UYQ0; P42208; E9Q3V6 Septin-2 (Fragment) OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=1; Septin-2 OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=2; Septin-2 OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=1 1 2 2 0.5134 0 1 1 1 632.34802 1263.68877 1263.68631 1.94 0.00123 0/0 0 0 2846404.25 HCD 30 MS2 36.67957 443.5 110 53.0477 14639 14639 14637 QEplus033719.raw F4 593.5 319.6 431.1 406.6 508.1 401.9 322 2.24 1 FALSE 0.001359 0.01945 0.286 -250 62487 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVPHQMAH [K].lVPHQMAH.[-] N-Term(TMT6plex) 2 P19536 "Cytochrome c oxidase subunit 5B, mitochondrial OS=Mus musculus OX=10090 GN=Cox5b PE=1 SV=1" P19536; Q9D881 "Cytochrome c oxidase subunit 5B, mitochondrial OS=Mus musculus OX=10090 GN=Cox5b PE=1 SV=1; Cytochrome c oxidase polypeptide Vb OS=Mus musculus OX=10090 GN=Cox5b-ps PE=1 SV=1" 0 2 2 0.6825 0 1 1 1 581.32379 1161.64031 1161.64001 0.25 0.00015 0/0 0 0 18822018 HCD 30 MS2 23.6718 597.4 87.398 53.0545 14642 14642 14637 QEplus033719.raw F4 664.4 424 629.7 588.6 584.4 693.4 288 3.37 1 FALSE 1.14E-05 5.90E-05 0.901 -250 62497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVAFQNSQTR [K].aVAFQNSQTR.[I] N-Term(TMT6plex) 2 Q9DB77 "Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrc2 PE=1 SV=1" A0A140LI98; Q9DB77 "Cytochrome b-c1 complex subunit 2, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Uqcrc2 PE=1 SV=1; Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrc2 PE=1 SV=1" 0 3 3 0.6133 0 1 1 1 450.91586 1350.73304 1350.73273 0.23 0.0001 0/0 0 0 8859716 HCD 30 MS2 58.49925 832.3 109.606 53.057 14643 14643 14637 QEplus033719.raw F4 884.7 721.8 901.3 642.7 964.8 878.6 410 3.31 1 FALSE 1.14E-05 0.000539 0.716 -250 62504 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RCTGPLPK [K].rcTGPLPk.[E] N-Term(TMT6plex); C2(Carbamidomethyl); K8(TMT6plex) 2 Q91VH2 Sorting nexin-9 OS=Mus musculus OX=10090 GN=Snx9 PE=1 SV=1 Q91VH2; Q3TZU7 Sorting nexin-9 OS=Mus musculus OX=10090 GN=Snx9 PE=1 SV=1; Sorting nexin OS=Mus musculus OX=10090 GN=Snx9 PE=2 SV=1 1 3 3 0.3333 0 1 1 1 462.94785 1386.82898 1386.82916 -0.13 -0.00006 0/0 0 0 17043626 HCD 30 MS2 48.86933 1338.2 90.243 53.0593 14644 14644 14637 QEplus033719.raw F4 1764.1 1139.3 1524.8 956 1333.9 1311 318 2.85 1 FALSE 0.0006216 0.00928 0.416 -250 62512 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNYPQSVPR [K].dNYPQSVPR.[L] N-Term(TMT6plex) 4 Q9WTI7-3 Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c Q9WTI7; Q9WTI7-3; Q9WTI7-2; Q9WTI7-4 Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c PE=1 SV=2; Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Isoform 2 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Isoform 4 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c 0 2 2 0.3173 0 1 1 1 652.84814 1304.68901 1304.67963 7.19 0.00469 0/0 0 0 13575275 HCD 30 MS2 36.63455 616 69.835 53.0615 14645 14645 14637 QEplus033719.raw F4 629.8 538.6 750.1 586.3 502.4 689.1 242 2.49 1 FALSE 1.14E-05 2.16E-05 0.984 -250 62520 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAEVDSDDTGGSAAQK [K].sAEVDSDDTGGSAAQk.[Q] N-Term(TMT6plex); K16(TMT6plex) 1 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 0 3 3 0.8739 0 1 1 1 666.00098 1995.98838 1995.98711 0.63 0.00042 0/0 0 0 13131956 HCD 30 MS2 9.049669 441.8 110 53.0641 14646 14646 14637 QEplus033719.raw F4 468.4 330.2 452.4 462.8 468.5 468.7 199 6.82 1 FALSE 1.14E-05 9.23E-16 2.953 -250 62537 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGFAGDDAPR [K].aGFAGDDAPR.[A] N-Term(TMT6plex) 36 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q3UAF6; Q3UD81; Q3U122; E9Q1F2; Q3UAA9; F6WX90; A0A1D5RM20; B2RRX1; A0A494B9T3; Q3U5R4; A1E281; Q3UAF7; G3UZ07; P62737; G3UYG0; P68134; Q3UBP6; D3YZY0; E9Q5F4; B1ATY1; P68033; P63260; Q61852; Q3UA89; Q3UGS0; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=4 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 2 2 0.7138 0 1 1 1 603.30872 1205.61016 1205.61122 -0.88 -0.00053 0/0 0 0 45692796 HCD 30 MS2 27.51572 888.5 32.901 53.0739 14649 14649 14648 QEplus033719.raw F4 893.5 734.3 955.4 758.4 1035.2 954 135 3.04 4 FALSE 1.14E-05 1.08E-06 1.231 -250 62564 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IANDIR [K].iANDIR.[FN] N-Term(TMT6plex) 2 P97807 "Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh PE=1 SV=3" P97807; P97807-2 "Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh PE=1 SV=3; Isoform Cytoplasmic of Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh" 0 2 2 0.2537 0 1 1 1 465.78262 930.55797 930.557 1.05 0.00049 0/0 0 0 48053200 HCD 30 MS2 18.82973 694.4 23.366 53.0809 14652 14652 14648 QEplus033719.raw F4 745.8 541.6 749.7 675.1 677.7 776.3 199 2.01 1 FALSE 0.002334 0.04659 0.152 -250 62565 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LANDIR [K].lANDIR.[FN] N-Term(TMT6plex) 1 Q8BLR5 PH and SEC7 domain-containing protein 4 OS=Mus musculus OX=10090 GN=Psd4 PE=1 SV=1 0 2 2 0.2537 0 1 2 2 465.78262 930.55797 930.557 1.05 0.00049 0/0 0 0 48053200 HCD 30 MS2 18.82973 694.4 23.366 53.0809 14652 14652 14648 QEplus033719.raw F4 745.8 541.6 749.7 675.1 677.7 776.3 199 2.01 1 FALSE 0.002334 0.04659 0.152 -250 62587 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVTDRETGSSK [R].iVTDRETGSSk.[G] N-Term(TMT6plex); K11(TMT6plex) 6 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 1 2 2 0.5169 0 1 1 1 825.97449 1650.9417 1650.94267 -0.59 -0.00049 0/0 0 0 7022392.5 HCD 30 MS2 23.24844 316.8 110 53.0904 14656 14656 14648 QEplus033719.raw F4 300.7 314.5 334.2 210.3 435.3 305.5 440 2.07 1 FALSE 1.14E-05 3.34E-08 1.518 -250 62613 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQPDAISR [R].vQPDAISR.[L] N-Term(TMT6plex) 3 H3BKD9 Myotubularin-related protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Sbf1 PE=1 SV=1 H3BKD9; Q6ZPE2-2; Q6ZPE2 Myotubularin-related protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Sbf1 PE=1 SV=1; Isoform 2 of Myotubularin-related protein 5 OS=Mus musculus OX=10090 GN=Sbf1; Myotubularin-related protein 5 OS=Mus musculus OX=10090 GN=Sbf1 PE=1 SV=2 0 2 2 0.3213 0 1 1 1 557.82532 1114.64336 1114.64179 1.41 0.00078 0/0 0 0 8056629 HCD 30 MS2 38.7396 482.9 110 53.1027 14660 14660 14659 QEplus033719.raw F4 523 388 496.4 438.2 549.2 502.7 278 2.49 1 FALSE 0.001456 0.02099 0.273 -250 62634 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DMSAQATGK [K].dMSAQATGk.[N] N-Term(TMT6plex); K9(TMT6plex) 6 Q6XMP4 Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1 Q6XMP4; Q8R346; Q8BGQ7; Q6PDM7; Q3TZ32; Q3UD67 "Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=2; Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1" 0 3 3 0.5806 0 1 1 1 456.25201 1366.74149 1366.74007 1.04 0.00047 0/0 0 0 26201752 HCD 30 MS2 15.20289 743.5 66.506 53.1098 14663 14663 14659 QEplus033719.raw F4 988.6 634.1 757.1 546.9 853.4 681 345 3.6 1 FALSE 1.14E-05 0.0004714 0.727 -250 62642 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AACDLVR [R].aAcDLVR.[G] N-Term(TMT6plex); C3(Carbamidomethyl) 3 Q9ERK4 Exportin-2 OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1 F6ZEW4; Q9ERK4; E9Q1T9 Exportin-2 (Fragment) OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1; Exportin-2 OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1; Chromosome segregation 1-like protein OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1 0 2 2 0.4925 0 1 1 1 517.28595 1033.56462 1033.56618 -1.51 -0.00078 0/0 0 0 23671586 HCD 30 MS2 61.69935 934.9 26.053 53.112 14664 14664 14659 QEplus033719.raw F4 1434.2 745.4 1036.4 632.4 805 956.2 325 1.99 1 FALSE 0.0006574 0.01001 0.404 -250 62647 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRDSEIMQQK [K].qRDSEIMQQk.[Q] N-Term(TMT6plex); K10(TMT6plex) 4 P84102 Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=1 SV=1 O88892; P84102; B2KF73; Q58DZ4 Small EDRK-rich factor 1 OS=Mus musculus OX=10090 GN=Serf1 PE=1 SV=1; Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=1 SV=1; Small EDRK-rich factor 1 OS=Mus musculus OX=10090 GN=Serf1 PE=4 SV=1; Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=2 SV=1 1 3 3 0.5 0 1 1 1 574.31934 1720.94345 1720.94162 1.06 0.00061 0/0 0 0 20849276 HCD 30 MS2 38.66907 827.9 52.263 53.1143 14665 14665 14659 QEplus033719.raw F4 843.4 728.5 918.3 618.6 1021.6 837.1 410 4.4 1 FALSE 1.14E-05 1.74E-09 1.761 -250 62651 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSESMAR [R].lSESMAR.[M] N-Term(TMT6plex) 3 Q3ULG5 DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1 Q3ULG5; Q8C5L1; P97311 DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1; DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Mcm6 PE=2 SV=1; DNA replication licensing factor MCM6 OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1 0 2 2 0.3296 0 1 1 1 511.77966 1022.55205 1022.5502 1.81 0.00093 0/0 0 0 15350156 HCD 30 MS2 20.73899 946.4 110 53.1168 14666 14666 14659 QEplus033719.raw F4 986.8 1023.1 949.4 577.2 1277.7 864.1 222 2.7 1 FALSE 0.0002814 0.005609 0.487 -250 62661 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDIGLSR [KR].gDIGLSR.[KG] N-Term(TMT6plex) 7 A2ATP6 Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=2 A2ATP6; Q8C854-1; A7UQY4; Q8C854-3; A2ATP5; G8JL68; Q8C854 Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=2; Isoform 3 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Isoform 2 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2; Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1 0 2 2 0.2435 0 1 1 1 473.7796 946.55193 946.55191 0.02 0.00001 0/0 0 0 11925214 HCD 30 MS2 40.67138 871.4 76.299 53.119 14667 14667 14659 QEplus033719.raw F4 964 709.8 953.5 641.6 983.7 976 163 2.3 1 FALSE 0.001318 0.01817 0.298 -250 62662 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDLGLSR [KR].gDLGLSR.[KG] N-Term(TMT6plex) 3 A0A286YE36; O88491; E9QAE4 "Histone-lysine N-methyltransferase, H3 lysine-36-specific OS=Mus musculus OX=10090 GN=Nsd1 PE=1 SV=1; Histone-lysine N-methyltransferase, H3 lysine-36 specific OS=Mus musculus OX=10090 GN=Nsd1 PE=1 SV=1; Histone-lysine N-methyltransferase, H3 lysine-36-specific OS=Mus musculus OX=10090 GN=Nsd1 PE=1 SV=1" 0 2 2 0.2435 0 1 2 2 473.7796 946.55193 946.55191 0.02 0.00001 0/0 0 0 11925214 HCD 30 MS2 40.67138 871.4 76.299 53.119 14667 14667 14659 QEplus033719.raw F4 964 709.8 953.5 641.6 983.7 976 163 2.3 1 FALSE 0.001318 0.01817 0.298 -250 62671 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CSGPGLGTGVR [K].cSGPGLGTGVR.[A] N-Term(TMT6plex); C1(Carbamidomethyl) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.6412 0 1 1 1 645.34668 1289.68608 1289.68334 2.13 0.00137 0/0 0 0 10709963 HCD 30 MS2 16.97559 682.1 110 53.1216 14668 14668 14659 QEplus033719.raw F4 754.2 435.3 745.9 746.1 523 888.2 279 3.79 1 FALSE 1.14E-05 5.70E-06 1.094 -250 62678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLREEDSK [K].vLREEDSk.[D] N-Term(TMT6plex); K8(TMT6plex) 5 A0A1L1SRX2 AMP deaminase OS=Mus musculus OX=10090 GN=Ampd3 PE=1 SV=1 A0A1L1SRX2; F6XQD0; D3YU73; O08739; D3Z4N3 AMP deaminase OS=Mus musculus OX=10090 GN=Ampd3 PE=1 SV=1; AMP deaminase 3 (Fragment) OS=Mus musculus OX=10090 GN=Ampd3 PE=1 SV=3; AMP deaminase 3 (Fragment) OS=Mus musculus OX=10090 GN=Ampd3 PE=1 SV=1; AMP deaminase 3 OS=Mus musculus OX=10090 GN=Ampd3 PE=1 SV=2; AMP deaminase 3 (Fragment) OS=Mus musculus OX=10090 GN=Ampd3 PE=1 SV=1 1 3 3 0.3707 0 1 1 1 478.61798 1433.83939 1433.83641 2.08 0.00099 0/0 0 0 5283261.5 HCD 30 MS2 24.78781 896.3 110 53.124 14669 14669 14659 QEplus033719.raw F4 982.3 739.8 978.5 856 952.5 868.8 450 2.59 1 FALSE 0.003182 0.0622 0.108 -250 62682 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYGNTGTK [R].vYGNTGTk.[V] N-Term(TMT6plex); K8(TMT6plex) 5 D3Z3F1 FIP1-like 1 protein (Fragment) OS=Mus musculus OX=10090 GN=Fip1l1 PE=1 SV=2 D3Z3F1; Q9D824-4; Q9D824-3; Q9D824; Q9D824-2 FIP1-like 1 protein (Fragment) OS=Mus musculus OX=10090 GN=Fip1l1 PE=1 SV=2; Isoform 4 of Pre-mRNA 3'-end-processing factor FIP1 OS=Mus musculus OX=10090 GN=Fip1l1; Isoform 3 of Pre-mRNA 3'-end-processing factor FIP1 OS=Mus musculus OX=10090 GN=Fip1l1; Pre-mRNA 3'-end-processing factor FIP1 OS=Mus musculus OX=10090 GN=Fip1l1 PE=1 SV=1; Isoform 2 of Pre-mRNA 3'-end-processing factor FIP1 OS=Mus musculus OX=10090 GN=Fip1l1 0 2 2 0.6016 0 1 1 1 649.38184 1297.7564 1297.75162 3.68 0.00239 0/0 0 0 3356606 HCD 30 MS2 28.57352 531.4 110 53.1314 14671 14671 14670 QEplus033719.raw F4 552.4 473 561.9 429.5 684.4 487.4 264 2.56 1 FALSE 1.14E-05 0.0001861 0.805 -250 62686 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSSASNTQDGVGSLCSR [K].nSSASNTQDGVGSLcSR.[A] N-Term(TMT6plex); C15(Carbamidomethyl) 4 A0A1D5RMM8 Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=2 Q8VI36-2; F8VQ28; Q8VI36; A0A1D5RMM8 Isoform Alpha of Paxillin OS=Mus musculus OX=10090 GN=Pxn; Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=1; Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=1; Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=2 0 3 3 0.7912 0 1 1 1 656.98145 1968.92978 1968.92425 2.81 0.00185 0/0 0 0 3666587.5 HCD 30 MS2 0 205.4 110 53.1339 14672 14672 14670 QEplus033719.raw F4 238 146.3 214.8 184.3 223.4 225.8 67 5.89 1 FALSE 1.14E-05 1.02E-09 1.805 -250 62693 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAAETIK [R].qAAETIk.[H] N-Term(TMT6plex); K7(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 0 2 2 0.276 0 1 1 1 609.87848 1218.74968 1218.74581 3.18 0.00194 0/0 0 0 39542552 HCD 30 MS2 24.20253 1453 40.874 53.1362 14673 14673 14670 QEplus033719.raw F4 2087.3 431 1088.8 2674.3 659 1777.6 549 2.79 1 FALSE 0.0002814 0.005744 0.484 -250 62732 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QNTELAK [K].qNTELAk.[L] N-Term(TMT6plex); K7(TMT6plex) 4 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0; Q8C7E8 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.4167 0 1 1 1 631.38043 1261.75359 1261.75162 1.56 0.00098 0/0 0 0 10289036 HCD 30 MS2 0 863.1 110 53.1479 14678 14678 14670 QEplus033719.raw F4 997.6 688.1 816 726.8 1242.6 707.5 587 3 1 FALSE 0.0002019 0.004101 0.524 -250 62740 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMGTPDVR [K].eMGTPDVR.[I] N-Term(TMT6plex) 4 P62900 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1 P62900; Q9CY93; A0A0A6YXL3; A0A0A6YX26 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=2 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1 0 2 2 0.6009 0 1 1 1 567.29651 1133.58574 1133.58222 3.1 0.00176 0/0 0 0 6630568.5 HCD 30 MS2 60.93545 1031.9 110 53.1504 14679 14679 14670 QEplus033719.raw F4 1373.1 809.5 1092.1 806.1 1057.6 1053.1 188 2.18 1 FALSE 0.001658 0.02729 0.231 -250 62745 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGQQIVGPPR [R].sGQQIVGPPR.[K] N-Term(TMT6plex) 5 Q3UVN5 NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1 Q3KQQ1; Q9CZ44-2; Q3UVN5; Q9CZ44; A2AT02 NSFL1 cofactor p47 (Fragment) OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1; Isoform 2 of NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=1 SV=1; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=1 SV=1 0 2 2 0.5769 0 1 1 1 634.37085 1267.73442 1267.732 1.91 0.00121 0/0 0 0 6304463.5 HCD 30 MS2 33.98574 512.2 110 53.153 14680 14680 14670 QEplus033719.raw F4 534.1 436.9 557.2 410.2 588.2 546.4 333 2.86 1 FALSE 1.14E-05 8.13E-07 1.254 -250 62754 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDRPLPENPYHSR [K].tDRPLPENPYHSR.[A] N-Term(TMT6plex) 2 A0A1S6GWI0 Complex I-19kD OS=Mus musculus OX=10090 GN=Ndufa8 PE=2 SV=1 A0A1S6GWI0; Q9DCJ5 Complex I-19kD OS=Mus musculus OX=10090 GN=Ndufa8 PE=2 SV=1; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Mus musculus OX=10090 GN=Ndufa8 PE=1 SV=3 0 4 4 0.6625 0 1 1 1 453.49091 1810.94179 1810.93976 1.12 0.00051 0/0 0 0 8111736 HCD 30 MS2 37.30042 561 110 53.1603 14682 14682 14681 QEplus033719.raw F4 618.9 464 568.1 479.6 655.7 579.4 301 4.77 1 FALSE 1.14E-05 1.22E-06 1.221 -250 62770 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLGTPTR [K].vLGTPTR.[E] N-Term(TMT6plex) 4 E9QAQ5 Glycogen synthase kinase-3 beta OS=Mus musculus OX=10090 GN=Gsk3b PE=1 SV=1 Q2NL51; D3Z7E5; E9QAQ5; Q9WV60 Glycogen synthase kinase-3 alpha OS=Mus musculus OX=10090 GN=Gsk3a PE=1 SV=2; [Tau protein] kinase OS=Mus musculus OX=10090 GN=Gsk3a PE=1 SV=1; Glycogen synthase kinase-3 beta OS=Mus musculus OX=10090 GN=Gsk3b PE=1 SV=1; Glycogen synthase kinase-3 beta OS=Mus musculus OX=10090 GN=Gsk3b PE=1 SV=2 0 2 2 0.3148 0 1 1 1 486.80603 972.60478 972.60395 0.86 0.00042 0/0 0 0 15135842 HCD 30 MS2 40.34614 1179.1 110 53.1675 14685 14685 14681 QEplus033719.raw F4 1268 901.8 1219.7 1024.1 1331.4 1329.8 192 2.16 1 FALSE 0.004873 0.08513 0.048 -250 62779 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CASQAGMTAYGTR [K].cASQAGMTAYGTR.[R] N-Term(TMT6plex); C1(Carbamidomethyl) 4 Q9DAW9 Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 Q9DAW9; A0A0G2JFI6; Q99JN5; A0A0G2JDV8 Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1; Calponin-3 (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=4; Cnn3 protein (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 0 3 3 0.7562 0 1 1 1 534.92468 1602.75949 1602.75658 1.82 0.00097 0/0 0 0 6881747 HCD 30 MS2 24.50381 753.7 110 53.17 14686 14686 14681 QEplus033719.raw F4 689.5 513.1 867.3 537.3 827.1 1087.8 62 4.84 1 FALSE 1.14E-05 1.29E-07 1.406 -250 62784 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAEVDSDDTGGSAAQK [K].sAEVDSDDTGGSAAQk.[Q] N-Term(TMT6plex); K16(TMT6plex) 1 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 0 2 2 0.8657 0 1 1 1 998.4975 1995.98772 1995.98711 0.3 0.0003 0/0 0 0 4837617 HCD 30 MS2 0 278.2 110 53.1726 14687 14687 14681 QEplus033719.raw F4 291.6 184.8 305.3 295 235.3 357.2 196 6.48 1 FALSE 1.14E-05 6.31E-16 3.706 -250 62794 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAASGLVGQENAR [K].qAASGLVGQENAR.[E] N-Term(TMT6plex) 2 Q3U1C2 RuvB-like helicase OS=Mus musculus OX=10090 GN=Ruvbl1 PE=1 SV=1 Q3U1C2; Q3UJN2 RuvB-like helicase OS=Mus musculus OX=10090 GN=Ruvbl1 PE=1 SV=1; RuvB-like helicase OS=Mus musculus OX=10090 GN=Ruvbl1 PE=2 SV=1 0 2 2 0.7672 0 1 1 1 765.41486 1529.82244 1529.82333 -0.59 -0.00045 0/0 0 0 6534951.5 HCD 30 MS2 39.83085 508.1 110 53.1776 14689 14689 14681 QEplus033719.raw F4 474.1 511.8 569.8 320.6 729.3 443.2 311 3.78 1 FALSE 1.14E-05 5.73E-12 2.233 -250 62805 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NGYDCECLGGGR [R].nGYDcEcLGGGR.[I] N-Term(TMT6plex); C5(Carbamidomethyl); C7(Carbamidomethyl) 1 Q9DAK9 14 kDa phosphohistidine phosphatase OS=Mus musculus OX=10090 GN=Phpt1 PE=1 SV=1 Q9DAK9 14 kDa phosphohistidine phosphatase OS=Mus musculus OX=10090 GN=Phpt1 PE=1 SV=1 0 2 2 1 0 1 1 1 793.84802 1586.68877 1586.68889 -0.08 -0.00006 0/0 0 0 5632425 HCD 30 MS2 28.7616 379 110 53.1826 14691 14691 14681 QEplus033719.raw F4 399.3 332.2 434.4 356.9 358.3 393.1 10 3.99 1 FALSE 1.14E-05 4.00E-08 1.503 -250 62806 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSQDAGGFGPEDR [R].dSQDAGGFGPEDR.[L] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.7996 0 1 1 1 790.36353 1579.71977 1579.71859 0.75 0.00059 0/0 0 0 3065620.25 HCD 30 MS2 0 181.5 110 53.1899 14693 14693 14692 QEplus033719.raw F4 198.8 151.2 194.4 164.5 188.1 192.1 23 4.59 2 FALSE 1.14E-05 1.25E-10 1.979 -250 62810 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQSTFK [K].tQSTFk.[N] N-Term(TMT6plex); K6(TMT6plex) 1 P11404 "Fatty acid-binding protein, heart OS=Mus musculus OX=10090 GN=Fabp3 PE=1 SV=5" P11404 "Fatty acid-binding protein, heart OS=Mus musculus OX=10090 GN=Fabp3 PE=1 SV=5" 0 2 2 0.428 0 1 1 1 585.34967 1169.69206 1169.69304 -0.84 -0.00049 0/0 0 0 6457689.5 HCD 30 MS2 18.24834 998 110 53.1924 14694 14694 14692 QEplus033719.raw F4 1356.4 436.1 767.8 1722.1 568.6 1137 138 2.36 1 FALSE 0.004832 0.08453 0.049 -250 62819 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQNDSAENETAEGEEKR [R].mQNDSAENETAEGEEkR.[E] N-Term(TMT6plex); K16(TMT6plex) 9 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; E9QA15; E9Q0M9; D3Z6I7; S4R1T7; E9Q9F3; Q7TMN5; E9QA16; Q3TUS1 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Cald1 protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1 1 3 3 0.8795 0 1 1 1 799.3855 2396.14194 2396.14 0.81 0.00065 0/0 0 0 9781821 HCD 30 MS2 0 433.6 110 53.1972 14696 14696 14692 QEplus033719.raw F4 385.2 533.7 482.5 310.3 518.9 370.9 118 6.89 1 FALSE 1.14E-05 6.31E-16 4.457 -250 62840 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELANTPDCPR [K].eLANTPDcPR.[M] N-Term(TMT6plex); C8(Carbamidomethyl) 2 Q8JZZ5 Phosphatidylinositol transfer protein beta isoform OS=Mus musculus OX=10090 GN=Pitpnb PE=1 SV=1 Q8JZZ5; P53811 Phosphatidylinositol transfer protein beta isoform OS=Mus musculus OX=10090 GN=Pitpnb PE=1 SV=1; Phosphatidylinositol transfer protein beta isoform OS=Mus musculus OX=10090 GN=Pitpnb PE=1 SV=2 0 2 2 0.6968 0 1 1 1 701.35413 1401.70098 1401.69938 1.14 0.0008 0/0 0 0 9764972 HCD 30 MS2 0 531.9 110 53.2047 14699 14699 14692 QEplus033719.raw F4 549.3 480.5 575.3 403.9 645.9 536.7 130 3.43 1 FALSE 1.14E-05 8.48E-07 1.251 -250 62845 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STGVALDAR [K].sTGVALDAR.[G] N-Term(TMT6plex) 5 Q6DFZ1 Golgi-specific brefeldin A-resistance factor 1 OS=Mus musculus OX=10090 GN=Gbf1 PE=1 SV=1 A0JLN9; Q8BYH5; Q3UPP2; Q6DFZ1; Q6A099 Gbf1 protein (Fragment) OS=Mus musculus OX=10090 GN=Gbf1 PE=2 SV=1; SEC7 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gbf1 PE=2 SV=1; SEC7 domain-containing protein OS=Mus musculus OX=10090 GN=Gbf1 PE=2 SV=1; Golgi-specific brefeldin A-resistance factor 1 OS=Mus musculus OX=10090 GN=Gbf1 PE=1 SV=1; MKIAA0248 protein (Fragment) OS=Mus musculus OX=10090 GN=Gbf1 PE=1 SV=1 0 2 2 0.2731 0 1 1 1 559.82117 1118.63506 1118.6367 -1.47 -0.00082 0/0 0 0 7060933 HCD 30 MS2 24.11032 802.6 110 53.2072 14700 14700 14692 QEplus033719.raw F4 810 679.7 880.2 611.4 1027.1 807.4 340 2.38 1 FALSE 0.0001504 0.003435 0.544 -250 62853 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FDSDAENPRDEPR [R].fDSDAENPRDEPR.[VAR] N-Term(TMT6plex) 14 Q95457 MHC class I heavy chain OS=Mus musculus OX=10090 GN=H2-D1 PE=2 SV=1 Q95457; Q61892; A0A2Z4SZA4; A0A2Z4T3Z0; A0A2Z4SXD7; A0A2Z4SZH7; A0A2Z4T2D0; Q31155; A0A2Z4T2X0; A0A2Z4SXR0; Q61894; P14426; A0A2Z4T1V3; A0A2Z4T3S6 "MHC class I heavy chain OS=Mus musculus OX=10090 GN=H2-D1 PE=2 SV=1; mRNA OS=Mus musculus OX=10090 GN=H2-D1 PE=2 SV=1; MHC class II antigen K (Fragment) OS=Mus musculus OX=10090 GN=H2-K1 PE=4 SV=1; MHC class II antigen K (Fragment) OS=Mus musculus OX=10090 GN=H2-K1 PE=4 SV=1; MHC class II antigen K (Fragment) OS=Mus musculus OX=10090 GN=H2-K1 PE=4 SV=1; MHC class II antigen K (Fragment) OS=Mus musculus OX=10090 GN=H2-K1 PE=4 SV=1; MHC class II antigen D (Fragment) OS=Mus musculus OX=10090 GN=H2-D1 PE=4 SV=1; MHC class I D-region cell surface antigen (D2d) (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; MHC class II antigen K (Fragment) OS=Mus musculus OX=10090 GN=H2-K1 PE=4 SV=1; MHC class II antigen K (Fragment) OS=Mus musculus OX=10090 GN=H2-K1 PE=4 SV=1; mRNA OS=Mus musculus OX=10090 GN=H2-K1 PE=2 SV=1; H-2 class I histocompatibility antigen, D-K alpha chain OS=Mus musculus OX=10090 GN=H2-D1 PE=1 SV=1; MHC class II antigen K (Fragment) OS=Mus musculus OX=10090 GN=H2-K1 PE=4 SV=1; MHC class II antigen K (Fragment) OS=Mus musculus OX=10090 GN=H2-K1 PE=4 SV=1" 1 3 3 0.5966 0 1 1 1 592.95221 1776.84208 1776.83502 3.97 0.00235 0/0 0 0 3771166.25 HCD 30 MS2 35.82493 508.2 110 53.2097 14701 14701 14692 QEplus033719.raw F4 501.6 482.7 591.5 403 554.6 515.7 81 4.09 1 FALSE 1.14E-05 9.43E-06 1.052 -250 62859 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TCIGTK [K].tcIGTk.[E] N-Term(TMT6plex); C2(Carbamidomethyl); K6(TMT6plex) 9 A0A2I3BQZ9 Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App PE=1 SV=1 A0A2I3BQZ9; A0A2I3BR03; A0A2I3BPT1; Q3TWF3; Q3TXI9; P12023-2; P12023; Q53ZT3; P12023-3 Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App PE=1 SV=1; Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App PE=1 SV=1; Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App PE=1 SV=1; Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App PE=1 SV=1; Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App PE=2 SV=1; Isoform APP695 of Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App; Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App PE=1 SV=3; Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App PE=2 SV=1; Isoform APP751 of Amyloid-beta A4 protein OS=Mus musculus OX=10090 GN=App 0 2 2 0.094 0 1 1 1 569.3399 1137.67253 1137.6702 2.05 0.00117 0/0 0 0 5027333 HCD 30 MS2 24.73602 794.9 110 53.2122 14702 14702 14692 QEplus033719.raw F4 919.4 635.2 921 695.7 752.8 845.3 222 1.49 1 FALSE 0.006298 0.1023 0 -250 62888 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAAETIK [R].qAAETIk.[H] N-Term(TMT6plex); K7(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 0 3 3 0.4007 0 1 1 1 406.92056 1218.74713 1218.74581 1.09 0.00044 0/0 0 0 32637692 HCD 30 MS2 11.23457 571.3 45.839 53.2263 14707 14707 14703 QEplus033719.raw F4 766.3 175.1 413.5 1137 205 730.7 553 2.92 1 FALSE 0.0001504 0.003418 0.544 -250 62893 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKGDAEEMAQR [R].akGDAEEMAQR.[K] N-Term(TMT6plex); K2(TMT6plex) 14 O70318 Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2 Q811B2; B6ZHC6; O70318; B6ZHD0; Q80UE5; Q8CGJ6; Q80UE3; A0A1W2P7I4; Q80UE4; A0A1W2P6I5; B6ZHC5; B6ZHC7; Q8C928; Q3UNQ6 Epb4.1l2 protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Epb4.1l2 protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Protein 4.1G OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1 1 3 3 0.6796 0 1 1 1 555.2998 1663.88486 1663.88378 0.65 0.00036 0/0 0 0 31536804 HCD 30 MS2 5.606702 981.1 60.874 53.2286 14708 14708 14703 QEplus033719.raw F4 887.5 1055.6 1200.9 695.9 1081.6 964.9 322 3.62 1 FALSE 1.14E-05 2.47E-08 1.543 -250 62897 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRDVIAQSQSGTGK [K].gRDVIAQSQSGTGk.[T] N-Term(TMT6plex); K14(TMT6plex) 5 Q91VC3 Eukaryotic initiation factor 4A-III OS=Mus musculus OX=10090 GN=Eif4a3 PE=1 SV=3 E9PV04; A2AFK7; A0A0N4SVM5; Q91VC3; A0A0N4SVP8 RNA helicase OS=Mus musculus OX=10090 GN=Eif4a3l1 PE=3 SV=2; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Eif4a3 PE=1 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Eif4a3l1 PE=4 SV=1; Eukaryotic initiation factor 4A-III OS=Mus musculus OX=10090 GN=Eif4a3 PE=1 SV=3; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a3l2 PE=3 SV=1 1 3 3 0.7823 0 1 1 1 621.3551 1862.05075 1862.04959 0.62 0.00039 0/0 0 0 15416748 HCD 30 MS2 3.357285 940.1 110 53.2356 14711 14711 14703 QEplus033719.raw F4 1002.9 921.6 1042.7 637.1 1141.9 894.5 470 5.65 1 FALSE 1.14E-05 7.02E-16 2.977 -250 62901 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KKQEALVAR [K].kkQEALVAR.[Y] N-Term(TMT6plex); K1(TMT6plex); K2(TMT6plex) 11 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" Q3URW8; B9EKJ1; E9Q447; B2RXX6; A3KGU9; Q3V1V5; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 2 4 4 0.4028 0 1 1 1 433.28677 1730.12526 1730.12555 -0.16 -0.00007 0/0 0 0 15450047 HCD 30 MS2 39.8563 1179.8 82.173 53.2379 14712 14712 14703 QEplus033719.raw F4 1156.7 972.3 1325.1 1069.6 1242 1313.2 179 2.11 2 FALSE 0.001213 0.01638 0.316 -250 62911 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTGPNSPDTANDGFVR [K].hTGPNSPDTANDGFVR.[L] N-Term(TMT6plex) 4 Q8C2Q7; P70333 Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus OX=10090 GN=Hnrnph1 PE=1 SV=1;Heterogeneous nuclear ribonucleoprotein H2 OS=Mus musculus OX=10090 GN=Hnrnph2 PE=1 SV=1 Q8C2Q7; P70333; O35737; Q3UR26 Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus OX=10090 GN=Hnrnph1 PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein H2 OS=Mus musculus OX=10090 GN=Hnrnph2 PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus OX=10090 GN=Hnrnph1 PE=1 SV=3; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnph2 PE=2 SV=1 0 3 3 0.822 0 1 1 1 638.64923 1913.93314 1913.93032 1.47 0.00094 0/0 0 0 13801001 HCD 30 MS2 12.7057 553.5 110 53.2404 14713 14713 14703 QEplus033719.raw F4 562.9 537 528.4 593.3 629.4 469.7 139 6.63 2 FALSE 1.14E-05 5.05E-14 2.623 -250 62919 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HFEQAIER [KR].hFEQAIER.[V] N-Term(TMT6plex) 5 Q3UDQ7 AAA domain-containing protein OS=Mus musculus OX=10090 GN=Afg3l2 PE=2 SV=1 Q3UDQ7; Q8JZQ2; Q3U7C0; Q920A7-2; Q920A7 AAA domain-containing protein OS=Mus musculus OX=10090 GN=Afg3l2 PE=2 SV=1; AFG3-like protein 2 OS=Mus musculus OX=10090 GN=Afg3l2 PE=1 SV=1; AAA domain-containing protein OS=Mus musculus OX=10090 GN=Afg3l2 PE=2 SV=1; Isoform 2 of AFG3-like protein 1 OS=Mus musculus OX=10090 GN=Afg3l1; AFG3-like protein 1 OS=Mus musculus OX=10090 GN=Afg3l1 PE=1 SV=2 0 3 3 0.5852 0 1 1 1 420.22937 1258.67356 1258.67415 -0.47 -0.0002 0/0 0 0 8950434 HCD 30 MS2 52.71923 701.8 95.649 53.2477 14715 14715 14714 QEplus033719.raw F4 1113.5 435.5 701.8 506.3 653.8 799.7 237 3.64 1 FALSE 1.14E-05 0.0002126 0.794 -250 62925 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSEVKPR [R].vSEVkPR.[M] N-Term(TMT6plex); K5(TMT6plex) 6 Q3UDI8 DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=2 SV=1 Q3UDI8; D3Z6N3; D3Z2K9; D3Z0J6; Q61881; Q3V122 DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=2 SV=1; DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=1 SV=1; DNA replication licensing factor MCM7 (Fragment) OS=Mus musculus OX=10090 GN=Mcm7 PE=1 SV=1; DNA replication licensing factor MCM7 (Fragment) OS=Mus musculus OX=10090 GN=Mcm7 PE=1 SV=1; DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=1 SV=1; DNA replication licensing factor MCM7 OS=Mus musculus OX=10090 GN=Mcm7 PE=2 SV=1 0 3 3 0.0657 0 1 1 1 424.93976 1272.80472 1272.80399 0.57 0.00024 0/0 0 0 10985795 HCD 30 MS2 47.29663 1023.9 89.572 53.2499 14716 14716 14714 QEplus033719.raw F4 1360 797.7 879.7 719.7 1374.4 1011.8 426 2.13 1 FALSE 0.004699 0.08261 0.054 -250 62933 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRLFDQR [K].dRLFDQR.[E] N-Term(TMT6plex) 3 P30416 Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=5 F7CAT1; P30416; F6S2D5 Peptidylprolyl isomerase (Fragment) OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=2; Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=5; Peptidylprolyl isomerase (Fragment) OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=9 1 3 3 0.3682 0 1 1 1 393.5542 1178.64804 1178.64794 0.09 0.00004 0/0 0 0 54535716 HCD 30 MS2 5.789368 349.2 25.55 53.2522 14717 14717 14714 QEplus033719.raw F4 354.6 297.3 384 255.8 457.3 346.4 325 2.58 1 FALSE 0.0006035 0.00895 0.422 -250 62945 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIEEHLQR [K].dIEEHLQR.[VE] N-Term(TMT6plex) 4 Q9WUD1 E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1 Q9WUD1; Q3TYJ0; A0A494BBI6; A0A494BBF6 E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stub1 PE=2 SV=1; E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1; E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1 0 3 3 0.6564 0 1 1 1 423.565 1268.68045 1268.67963 0.65 0.00027 0/0 0 0 27014362 HCD 30 MS2 50.14218 652.7 50.621 53.2567 14719 14719 14714 QEplus033719.raw F4 793.6 471.1 611.9 607.6 780.9 651.1 291 3.58 1 FALSE 1.14E-05 0.0005347 0.717 -250 62978 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNYPQSVPR [K].dNYPQSVPR.[L] N-Term(TMT6plex) 4 Q9WTI7-3 Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c Q9WTI7; Q9WTI7-3; Q9WTI7-2; Q9WTI7-4 Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c PE=1 SV=2; Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Isoform 2 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Isoform 4 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c 0 2 2 0.4776 0 1 1 1 652.84393 1304.68059 1304.67963 0.74 0.00048 0/0 0 0 14391690 HCD 30 MS2 21.51332 617.8 110 53.2662 14723 14723 14714 QEplus033719.raw F4 621.3 550 694.1 532.3 665 644 208 3.12 1 FALSE 1.14E-05 2.54E-05 0.97 -250 62989 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAQCPIVER [R].kAQcPIVER.[L] N-Term(TMT6plex); K1(TMT6plex); C4(Carbamidomethyl) 4 Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 P97461; D3Z1S8; D3YYM6; Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=3; 40S ribosomal protein S5 (Fragment) OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1; 40S ribosomal protein S5 (Fragment) OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1; 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 1 3 3 0.1988 0 1 1 1 520.31024 1558.91617 1558.91395 1.42 0.00074 0/0 0 0 21359392 HCD 30 MS2 0 1068 90.128 53.276 14726 14726 14725 QEplus033719.raw F4 1030.9 1156.1 1320.6 903.4 937.7 1059.3 394 3.37 1 FALSE 1.14E-05 1.99E-07 1.37 -250 62996 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQGSGLSSGGAGEGQGPK [K].sQGSGLSSGGAGEGQGPk.[K] N-Term(TMT6plex); K18(TMT6plex) 2 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 B9EIU1; Q8CGC7 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4 0 3 3 0.7869 0 1 1 1 673.6886 2019.05124 2019.05072 0.26 0.00018 0/0 0 0 51843304 HCD 30 MS2 26.30249 506.6 52.891 53.2783 14727 14727 14725 QEplus033719.raw F4 525.8 431.6 545 443.9 547.9 545.6 355 6.57 1 FALSE 1.14E-05 6.31E-16 3.64 -250 63002 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TARPNITDNK [K].tARPNITDNk.[D] N-Term(TMT6plex); K10(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 3 3 0.64 0 1 1 1 529.97961 1587.92429 1587.92188 1.52 0.0008 0/0 0 0 103874288 HCD 30 MS2 13.05714 962.8 16.961 53.2805 14728 14728 14725 QEplus033719.raw F4 1052 453.1 958 967.1 500.9 1845.4 469 3.5 1 FALSE 1.14E-05 7.61E-05 0.88 -250 63016 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAESNAELK [K].nAESNAELk.[G] N-Term(TMT6plex); K9(TMT6plex) 5 Q80V08 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1 Q80V08; Q9CPR4; Q6ZWZ7; Q6PHZ1; Q505B1 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=1 SV=3; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=1 SV=1; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1; 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1 0 2 2 0.5077 0 1 1 1 717.40454 1433.80181 1433.80003 1.24 0.00089 0/0 0 0 55693068 HCD 30 MS2 26.67266 942.9 30.452 53.2851 14730 14730 14725 QEplus033719.raw F4 1003.9 797.3 992.6 896.3 920.7 1046.3 463 3.88 1 FALSE 1.14E-05 2.25E-06 1.171 -250 63024 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAIDAGYR [K].aAIDAGYR.[H] N-Term(TMT6plex) 3 P45377 Aldose reductase-related protein 2 OS=Mus musculus OX=10090 GN=Akr1b8 PE=1 SV=2 P21300; Q3UGS8; P45377 Aldo-keto reductase family 1 member B7 OS=Mus musculus OX=10090 GN=Akr1b7 PE=1 SV=4; Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b7 PE=2 SV=1; Aldose reductase-related protein 2 OS=Mus musculus OX=10090 GN=Akr1b8 PE=1 SV=2 0 2 2 0.3868 0 1 1 1 533.30072 1065.59416 1065.58902 4.82 0.00257 0/0 0 0 29500292 HCD 30 MS2 52.00801 1075 33.467 53.2873 14731 14731 14725 QEplus033719.raw F4 1154.9 814.4 1402.7 997.4 834.6 1245.9 207 2.43 1 FALSE 0.0001603 0.003563 0.54 -250 63049 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAESNAELK [K].nAESNAELk.[G] N-Term(TMT6plex); K9(TMT6plex) 5 Q80V08 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1 Q80V08; Q9CPR4; Q6ZWZ7; Q6PHZ1; Q505B1 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=1 SV=3; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=1 SV=1; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1; 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1 0 3 3 0.4648 0 1 1 1 478.60495 1433.8003 1433.80003 0.19 0.00009 0/0 0 0 22345612 HCD 30 MS2 46.45125 865.6 47.874 53.2941 14734 14734 14725 QEplus033719.raw F4 990.1 684.5 958.5 744 920.8 895.6 435 3.83 1 FALSE 1.14E-05 7.18E-06 1.075 -250 63058 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTASSAATSK [K].vTASSAATSk.[S] N-Term(TMT6plex); K10(TMT6plex) 6 Q8CE80 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1 A0A338P6J9; P51125-6; Q8CE80; P51125; P51125-3; P51125-2 Calpain inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 6 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpastatin OS=Mus musculus OX=10090 GN=Cast PE=1 SV=2; Isoform 3 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Isoform 2 of Calpastatin OS=Mus musculus OX=10090 GN=Cast 0 2 2 0.6927 0 1 1 1 690.90967 1380.81206 1380.80987 1.59 0.0011 0/0 0 0 17811996 HCD 30 MS2 32.16122 983.9 110 53.2966 14735 14735 14725 QEplus033719.raw F4 1014.6 892.2 1010.4 814.6 1308.4 863.1 364 3.84 1 FALSE 1.14E-05 2.78E-08 1.533 -250 63066 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAMELQR [R].tAMELQR.[R] N-Term(TMT6plex) 2 Q91ZW3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Mus musculus OX=10090 GN=Smarca5 PE=1 SV=1 Q3U0F8; Q91ZW3 SANT domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Smarca5 PE=2 SV=1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Mus musculus OX=10090 GN=Smarca5 PE=1 SV=1 0 2 2 0.335 0 1 1 1 539.29956 1077.59184 1077.5924 -0.51 -0.00028 0/0 0 0 8814341 HCD 30 MS2 52.07843 1265.4 110 53.3039 14737 14737 14736 QEplus033719.raw F4 1916.4 920.2 1326.6 927.9 1190.3 1310.7 217 1.97 1 FALSE 0.001473 0.02145 0.269 -250 63071 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CTQDLGNSTK [K].cTQDLGNSTk.[A] N-Term(TMT6plex); C1(Carbamidomethyl); K10(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.655 0 1 1 1 791.4212 1581.83513 1581.83068 2.82 0.00223 0/0 0 0 17422152 HCD 30 MS2 0 723.4 110 53.3065 14738 14738 14736 QEplus033719.raw F4 801.4 656.1 750.3 630.5 852 650.2 310 4.29 1 FALSE 1.14E-05 5.47E-08 1.477 -250 63080 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HMGIGK [R].hMGIGk.[R] N-Term(TMT6plex); K6(TMT6plex) 2 Q5I0T8 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 Q5I0T8; A2A547 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1; Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 0 3 3 0.7922 0 1 1 1 367.5603 1100.66635 1100.66506 1.18 0.00043 0/0 0 0 21099420 HCD 30 MS2 30.24146 782.1 58.008 53.3109 14740 14740 14736 QEplus033719.raw F4 898.2 538.2 808.2 771.1 877.4 799.7 274 3.32 1 FALSE 0.0004793 0.007586 0.447 -250 63092 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTASSAATSK [K].vTASSAATSk.[S] N-Term(TMT6plex); K10(TMT6plex) 6 Q8CE80 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1 A0A338P6J9; P51125-6; Q8CE80; P51125; P51125-3; P51125-2 Calpain inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 6 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpastatin OS=Mus musculus OX=10090 GN=Cast PE=1 SV=2; Isoform 3 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Isoform 2 of Calpastatin OS=Mus musculus OX=10090 GN=Cast 0 2 2 0.6835 0 1 1 1 690.90576 1380.80425 1380.80987 -4.07 -0.00281 0/0 0 0 17159888 HCD 30 MS2 19.20234 944.4 110 53.3157 14742 14742 14736 QEplus033719.raw F4 976.8 818.4 978.5 816 1249.5 827.2 372 4.17 1 FALSE 1.14E-05 2.40E-08 1.545 -250 63103 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESIETMR [K].eSIETMR.[T] N-Term(TMT6plex) 2 Q3V009 Transmembrane emp24 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Tmed1 PE=1 SV=1 Q3V009; Q05DM6 Transmembrane emp24 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Tmed1 PE=1 SV=1; Tmed1 protein OS=Mus musculus OX=10090 GN=Tmed1 PE=2 SV=1 0 2 2 0.4329 0 1 1 1 547.79034 1094.57341 1094.57133 1.91 0.00104 0/0 0 0 12857884 HCD 30 MS2 34.65427 1081.1 110 53.3205 14744 14744 14736 QEplus033719.raw F4 1623.9 774.3 1025.3 860.5 1094 1108.3 220 2.31 1 FALSE 0.001736 0.02918 0.221 -250 63118 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQGSGLSSGGAGEGQGPK [K].sQGSGLSSGGAGEGQGPk.[K] N-Term(TMT6plex); K18(TMT6plex) 2 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 B9EIU1; Q8CGC7 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4 0 4 4 0.6368 0 1 1 1 505.51938 2019.05568 2019.05072 2.46 0.00124 0/0 0 0 3732971.25 HCD 30 MS2 28.20943 748.9 110 53.3255 14746 14746 14736 QEplus033719.raw F4 830 578.8 795.5 729.2 660.6 899.5 368 3.8 1 FALSE 1.14E-05 8.96E-10 1.816 -250 63125 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVTGDNVNTAR [R].mVTGDNVNTAR.[A] N-Term(TMT6plex) 7 Q6Q477 Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1 Q6Q477-2; Q6Q477; D1FNM9; D1FNM8; H2BL43; E9Q828; F7AAP4 Isoform 2 of Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4; Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=2 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=2 SV=2; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=2 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1 0 2 2 0.6111 0 1 1 1 703.86768 1406.72807 1406.72593 1.53 0.00107 0/0 0 0 9933869 HCD 30 MS2 15.13854 478.6 110 53.3328 14748 14748 14747 QEplus033719.raw F4 519.3 369 499 394.5 613.5 476.2 234 3.24 1 FALSE 1.14E-05 2.35E-08 1.547 -250 63149 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSPINTK [R].nSPINTk.[N] N-Term(TMT6plex); K7(TMT6plex) 1 Q9D898 Actin-related protein 2/3 complex subunit 5-like protein OS=Mus musculus OX=10090 GN=Arpc5l PE=1 SV=1 Q9D898 Actin-related protein 2/3 complex subunit 5-like protein OS=Mus musculus OX=10090 GN=Arpc5l PE=1 SV=1 0 2 2 0.3224 0 1 1 1 616.37494 1231.7426 1231.74106 1.25 0.00077 0/0 0 0 12482638 HCD 30 MS2 14.65129 957.1 110 53.3426 14752 14752 14747 QEplus033719.raw F4 1116.2 685.6 949.3 969.1 1056.2 966.4 455 2.45 1 FALSE 0.0005174 0.008123 0.437 -250 63166 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPSQEPSAPGK [R].sPSQEPSAPGk.[A] N-Term(TMT6plex); K11(TMT6plex) 2 Q8JZQ9 Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=1 SV=1 Q8JZQ9; Q8CIJ3 Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=2 SV=1 0 2 2 0.5549 0 1 1 1 771.93079 1542.8543 1542.85279 0.97 0.00075 0/0 0 0 9806794 HCD 30 MS2 34.66913 384.2 110 53.3477 14754 14754 14747 QEplus033719.raw F4 390 301.3 434.3 314.3 414.2 451 358 3.55 1 FALSE 1.14E-05 1.01E-09 1.807 -250 63173 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTGPNSPDTANDGFVR [K].hTGPNSPDTANDGFVR.[L] N-Term(TMT6plex) 4 Q8C2Q7; P70333 Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus OX=10090 GN=Hnrnph1 PE=1 SV=1;Heterogeneous nuclear ribonucleoprotein H2 OS=Mus musculus OX=10090 GN=Hnrnph2 PE=1 SV=1 Q8C2Q7; P70333; O35737; Q3UR26 Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus OX=10090 GN=Hnrnph1 PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein H2 OS=Mus musculus OX=10090 GN=Hnrnph2 PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein H OS=Mus musculus OX=10090 GN=Hnrnph1 PE=1 SV=3; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnph2 PE=2 SV=1 0 2 2 0.795 0 1 1 1 957.4715 1913.93572 1913.93032 2.82 0.0027 0/0 0 0 4978599.5 HCD 30 MS2 0 101.7 110 53.3502 14755 14755 14747 QEplus033719.raw F4 92.7 99.1 111.6 87.4 157.3 61.9 145 5.17 2 FALSE 1.14E-05 7.77E-14 2.588 -250 63181 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSELGQGSPK [K].nSELGQGSPk.[I] N-Term(TMT6plex); K10(TMT6plex) 1 A0A0G2JFH2 Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 A0A0G2JFH2 Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 0 2 2 0.6452 0 1 1 1 737.91742 1474.82756 1474.82658 0.67 0.00049 0/0 0 0 5777868.5 HCD 30 MS2 0 385 110 53.3527 14756 14756 14747 QEplus033719.raw F4 438.2 160.8 399.5 530.4 207.9 573.2 438 3.72 1 FALSE 1.14E-05 1.02E-05 1.046 -250 63189 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEVLQPQPR [R].gEVLQPQPR.[N] N-Term(TMT6plex) 2 Q8BIG7 Catechol O-methyltransferase domain-containing protein 1 OS=Mus musculus OX=10090 GN=Comtd1 PE=1 SV=1 Q8BIG7; H3BJ37 Catechol O-methyltransferase domain-containing protein 1 OS=Mus musculus OX=10090 GN=Comtd1 PE=1 SV=1; Catechol O-methyltransferase domain-containing protein 1 OS=Mus musculus OX=10090 GN=Comtd1 PE=1 SV=1 0 2 2 0.6036 0 1 1 1 626.86481 1252.72234 1252.7211 0.99 0.00062 0/0 0 0 5030664 HCD 30 MS2 0 481.3 110 53.3552 14757 14757 14747 QEplus033719.raw F4 486.3 350.3 523.2 419.2 559.3 549.5 334 2.75 1 FALSE 1.14E-05 0.0002648 0.776 -250 63195 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAQNQPIDK [R].eAQNQPIDk.[A] N-Term(TMT6plex); K9(TMT6plex) 3 Q99LI7 Cleavage stimulation factor subunit 3 OS=Mus musculus OX=10090 GN=Cstf3 PE=1 SV=1 Q8CE71; Q99LI7; Q3TXN6 Cstf3 protein OS=Mus musculus OX=10090 GN=Cstf3 PE=2 SV=1; Cleavage stimulation factor subunit 3 OS=Mus musculus OX=10090 GN=Cstf3 PE=1 SV=1; Suf domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Cstf3 PE=2 SV=1 0 2 2 0.6513 0 1 1 1 750.92566 1500.84404 1500.84223 1.21 0.00091 0/0 0 0 4436263.5 HCD 30 MS2 0 230.3 110 53.3626 14759 14759 14758 QEplus033719.raw F4 237 212.5 255.3 168.4 281.8 227 381 3.9 1 FALSE 1.14E-05 1.12E-06 1.228 -250 63202 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQGSGLSSGGAGEGQGPK [K].sQGSGLSSGGAGEGQGPk.[K] N-Term(TMT6plex); K18(TMT6plex) 2 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 B9EIU1; Q8CGC7 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4 0 2 2 0.8533 0 1 1 1 1010.02966 2019.05205 2019.05072 0.66 0.00067 0/0 0 0 3975967 HCD 30 MS2 0 183 110 53.3651 14760 14760 14758 QEplus033719.raw F4 180.6 148.7 191.5 188.7 182 206.4 356 6 1 FALSE 1.14E-05 6.31E-16 4.493 -250 63209 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERNTDQASMPDNTAAQK [K].eRNTDQASMPDNTAAQk.[V] N-Term(TMT6plex); K17(TMT6plex) 7 Q69ZX3; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; A0A2R8VHF9; A0A338P6K2; O08638-2; O08638; Q8VDD5; E9QPE7 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2 1 3 3 0.7913 0 1 1 1 779.06281 2335.17386 2335.17124 1.12 0.00087 0/0 0 0 87902944 HCD 30 MS2 2.543975 501.4 34.176 53.3674 14761 14761 14758 QEplus033719.raw F4 507.5 459.2 573.4 315.7 663 489.4 242 7.86 2 FALSE 1.14E-05 6.31E-16 4.144 -250 63215 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAVTYTEHAKR [R].dAVTYTEHAkR.[K] N-Term(TMT6plex); K10(TMT6plex) 2 P62806 Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2 Q61667; P62806 Histone H4 (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2 1 4 4 0.5406 0 1 1 1 437.99823 1748.97109 1748.96955 0.88 0.00038 0/0 0 0 65796048 HCD 30 MS2 38.30526 557 9.979 53.3696 14762 14762 14758 QEplus033719.raw F4 459.1 596.1 636.7 462.6 690 497.2 447 3.57 1 FALSE 1.14E-05 0.0001977 0.8 -250 63223 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTPITVVR [R].rTPITVVR.[Q] N-Term(TMT6plex) 5 P13020-2 Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn Q3UCW8; Q3U9Q8; P13020-2; Q3TGJ9; P13020 Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Gelsolin OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=3 1 3 3 0.4624 0 1 1 1 390.92239 1170.75263 1170.75201 0.53 0.00021 0/0 0 0 53630936 HCD 30 MS2 26.8924 347.1 22.378 53.3719 14763 14763 14758 QEplus033719.raw F4 367.5 275.4 360.6 318.1 398.7 362.5 142 3.46 1 FALSE 0.0001401 0.003221 0.551 -250 63256 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDEELNK [R].nDEELNk.[L] N-Term(TMT6plex); K7(TMT6plex) 14 Q149V4; Q8BFU2; P27661 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1;Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3;Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 Q149V4; Q8BFU2; Q64522; C0HKE5; Q8CGP5; A0AUV1; Q8CGP4; Q8R1M2; P27661; A0A0N4SV66; Q64426; Q8CGP7; Q8CGP6; Q6GSS7 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1; Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3; Histone H2A type 2-B OS=Mus musculus OX=10090 GN=H2ac21 PE=1 SV=3; Histone H2A type 1-G OS=Mus musculus OX=10090 GN=H2ac11 PE=1 SV=1; Histone H2A type 1-F OS=Mus musculus OX=10090 GN=Hist1h2af PE=1 SV=3; Histone H2A (Fragment) OS=Mus musculus OX=10090 GN=H2ac12 PE=2 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2ac1 PE=1 SV=1; Histone H2A.J OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2; Histone H2A OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A (Fragment) OS=Mus musculus domesticus OX=10092 GN=H2A PE=2 SV=1; Histone H2A type 1-K OS=Mus musculus OX=10090 GN=H2ac15 PE=1 SV=3; Histone H2A type 1-H OS=Mus musculus OX=10090 GN=H2ac12 PE=1 SV=3; Histone H2A type 2-A OS=Mus musculus OX=10090 GN=Hist2h2aa1 PE=1 SV=3 0 2 2 0.5084 0 1 1 1 660.36469 1319.72209 1319.72072 1.04 0.00069 0/0 0 0 252174640 HCD 30 MS2 3.746651 739.8 7.027 53.3905 14770 14770 14769 QEplus033719.raw F4 687.4 779.8 739.6 490.4 1208.7 533.2 370 2.99 3 FALSE 0.001108 0.01442 0.34 -250 63263 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDEELNK [R].nDEELNk.[L] N-Term(TMT6plex); K7(TMT6plex) 14 Q149V4; Q8BFU2; P27661 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1;Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3;Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 Q149V4; Q8BFU2; Q64522; C0HKE5; Q8CGP5; A0AUV1; Q8CGP4; Q8R1M2; P27661; A0A0N4SV66; Q64426; Q8CGP7; Q8CGP6; Q6GSS7 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1; Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3; Histone H2A type 2-B OS=Mus musculus OX=10090 GN=H2ac21 PE=1 SV=3; Histone H2A type 1-G OS=Mus musculus OX=10090 GN=H2ac11 PE=1 SV=1; Histone H2A type 1-F OS=Mus musculus OX=10090 GN=Hist1h2af PE=1 SV=3; Histone H2A (Fragment) OS=Mus musculus OX=10090 GN=H2ac12 PE=2 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2ac1 PE=1 SV=1; Histone H2A.J OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2; Histone H2A OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A (Fragment) OS=Mus musculus domesticus OX=10092 GN=H2A PE=2 SV=1; Histone H2A type 1-K OS=Mus musculus OX=10090 GN=H2ac15 PE=1 SV=3; Histone H2A type 1-H OS=Mus musculus OX=10090 GN=H2ac12 PE=1 SV=3; Histone H2A type 2-A OS=Mus musculus OX=10090 GN=Hist2h2aa1 PE=1 SV=3 0 3 3 0.4681 0 1 1 1 440.5787 1319.72156 1319.72072 0.64 0.00028 0/0 0 0 48718064 HCD 30 MS2 22.28102 591.6 19.101 53.3927 14771 14771 14769 QEplus033719.raw F4 613.7 555.9 583.7 419.7 847.2 529.2 374 2.82 3 FALSE 0.005406 0.09234 0.028 -250 63271 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVADAIR [K].aVADAIR.[T] N-Term(TMT6plex) 5 P80315 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3 G3UYW5; P80315; Q3TII0; Q3UJZ8; G5E839 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1 0 2 2 0.2807 0 1 1 1 472.79062 944.57396 944.57265 1.39 0.00066 0/0 0 0 83008536 HCD 30 MS2 29.2967 786.9 13.274 53.395 14772 14772 14769 QEplus033719.raw F4 820.7 664.4 902.9 594.6 847 891.8 249 2.28 1 FALSE 0.0002218 0.004543 0.513 -250 63278 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKPAETPAPAHK [K].akPAETPAPAHk.[A] N-Term(TMT6plex); K2(TMT6plex); K12(TMT6plex) 1 Q9D2G2 "Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Mus musculus OX=10090 GN=Dlst PE=1 SV=1" Q9D2G2 "Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Mus musculus OX=10090 GN=Dlst PE=1 SV=1" 0 4 4 0.71 0 1 1 1 477.04419 1905.15493 1905.15249 1.28 0.00061 0/0 0 0 82110104 HCD 30 MS2 6.185349 546.4 20.955 53.3973 14773 14773 14769 QEplus033719.raw F4 635.3 392.2 559.1 614.7 462 615.1 335 5.38 1 FALSE 1.14E-05 8.23E-10 1.823 -250 63282 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERNTDQASMPDNTAAQK [K].eRNTDQASMPDNTAAQk.[V] N-Term(TMT6plex); K17(TMT6plex) 7 Q69ZX3; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; A0A2R8VHF9; A0A338P6K2; O08638-2; O08638; Q8VDD5; E9QPE7 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2 1 4 4 0.7303 0 1 1 1 584.54895 2335.17397 2335.17124 1.17 0.00068 0/0 0 0 39910384 HCD 30 MS2 23.54962 935.4 65.078 53.4018 14775 14775 14769 QEplus033719.raw F4 926.5 908.4 1069.9 683.8 1150.7 873.2 243 5.19 2 FALSE 1.14E-05 2.34E-06 1.167 -250 63288 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YYVGHK [R].yYVGHk.[G] N-Term(TMT6plex); K6(TMT6plex) 4 Q9CQL1 Protein mago nashi homolog 2 OS=Mus musculus OX=10090 GN=Magohb PE=2 SV=1 Q9CQL1; P61327; A0A023T778; G3UZH0 Protein mago nashi homolog 2 OS=Mus musculus OX=10090 GN=Magohb PE=2 SV=1; Protein mago nashi homolog OS=Mus musculus OX=10090 GN=Magoh PE=2 SV=1; Mago nashi protein OS=Mus musculus OX=10090 GN=Magohb PE=1 SV=1; Protein mago nashi homolog 2 (Fragment) OS=Mus musculus OX=10090 GN=Magohb PE=3 SV=1 0 3 3 0.532 0 1 1 1 408.90988 1224.71509 1224.71411 0.8 0.00033 0/0 0 0 28427334 HCD 30 MS2 27.91608 679.5 36.357 53.404 14776 14776 14769 QEplus033719.raw F4 595.6 587.3 722.4 539.9 861.9 769.9 294 2.97 1 FALSE 0.001429 0.02068 0.275 -250 63299 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAATPESQEPQAK [K].aAATPESQEPQAk.[G] N-Term(TMT6plex); K13(TMT6plex) 1 P28667 MARCKS-related protein OS=Mus musculus OX=10090 GN=Marcksl1 PE=1 SV=2 P28667 MARCKS-related protein OS=Mus musculus OX=10090 GN=Marcksl1 PE=1 SV=2 0 3 3 0.781 0 1 1 1 595.99707 1785.97666 1785.9747 1.1 0.00065 0/0 0 0 16981064 HCD 30 MS2 11.46772 867.7 110 53.411 14779 14779 14769 QEplus033719.raw F4 907.3 820.6 916.7 630.7 1072.6 858.5 425 4.52 1 FALSE 1.14E-05 2.46E-07 1.353 -250 63312 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSELQTQAK [K].gSELQTQAk.[A] N-Term(TMT6plex); K9(TMT6plex) 1 P81644 SWISS-PROT:P81644 (Bos taurus) Apolipoprotein A-II precursor P81644 SWISS-PROT:P81644 (Bos taurus) Apolipoprotein A-II precursor 0 2 2 0.517 0 1 1 1 710.41577 1419.82427 1419.82076 2.47 0.00175 0/0 0 0 5552192.5 HCD 30 MS2 0 462.8 110 53.4209 14782 14782 14780 QEplus033719.raw F4 458.8 142 178.1 104.5 1754.3 139.2 423 3.52 1 TRUE 1.14E-05 6.93E-07 1.268 -250 63321 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KEEGEAFAR [K].kEEGEAFAR.[E] N-Term(TMT6plex); K1(TMT6plex) 3 P53994 Ras-related protein Rab-2A OS=Mus musculus OX=10090 GN=Rab2a PE=1 SV=1 Q6PDZ3; Q8BXY4; P53994 "RAB2A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab2a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab2a PE=2 SV=1; Ras-related protein Rab-2A OS=Mus musculus OX=10090 GN=Rab2a PE=1 SV=1" 1 3 3 0.6034 0 1 1 1 498.94913 1494.83283 1494.83166 0.78 0.00039 0/0 0 0 71510464 HCD 30 MS2 19.63328 1295.5 30.501 53.4231 14783 14783 14780 QEplus033719.raw F4 1297 1169.3 1490.5 1067.2 1378 1370.9 432 3.53 1 FALSE 5.44E-05 0.00235 0.583 -250 63339 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAQQELEEQTR [K].kAQQELEEQTR.[R] N-Term(TMT6plex); K1(TMT6plex) 2 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 1 3 3 0.7041 0 1 1 1 606.67633 1818.01444 1818.01215 1.26 0.00076 0/0 0 0 23400706 HCD 30 MS2 6.115723 1301.4 110 53.4324 14787 14787 14780 QEplus033719.raw F4 1326.2 1146.5 1346 1056.8 1593.7 1339.2 458 4.36 1 FALSE 1.14E-05 3.59E-10 1.891 -250 63343 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YSPGQLR [K].ySPGQLR.[G] N-Term(TMT6plex) 2 Q9CZH7 Matrix-remodeling-associated protein 7 OS=Mus musculus OX=10090 GN=Mxra7 PE=1 SV=2 Q9CZH7; Q9D1T2 Matrix-remodeling-associated protein 7 OS=Mus musculus OX=10090 GN=Mxra7 PE=1 SV=2; Matrix-remodeling-associated protein 7 OS=Mus musculus OX=10090 GN=Mxra7 PE=1 SV=1 0 2 2 0.3691 0 1 1 1 525.30103 1049.59477 1049.59411 0.63 0.00033 0/0 0 0 24147052 HCD 30 MS2 38.42674 1122.4 66.513 53.4347 14788 14788 14780 QEplus033719.raw F4 1262.2 834.7 1247 1107.9 1036.7 1245.7 153 2.33 1 FALSE 0.00484 0.08478 0.049 -250 63351 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGRRPDQQLQGDGK [R].vGRRPDQQLQGDGk.[L] N-Term(TMT6plex); K14(TMT6plex) 13 A0A0N4SV32 Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1 A0A0N4SUQ1; A0A0N4SV40; A0A0N4SV32; Q9CY58-3; A0A0N4SUN8; Q9CY58-4; A0A0N4SWH2; Q3V274; A0A0N4SVK5; Q3UJK2; Q9CY58; Q9CY58-2; Q3UMP4 Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Isoform 3 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Isoform 4 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; HABP4_PAI-RBP1 domain-containing protein OS=Mus musculus OX=10090 GN=Serbp1 PE=2 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; HABP4_PAI-RBP1 domain-containing protein OS=Mus musculus OX=10090 GN=Serbp1 PE=2 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=2; Isoform 2 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1 1 4 4 0.5928 0 1 1 1 503.79202 2012.14626 2012.14014 3.04 0.00153 0/0 0 0 19941444 HCD 30 MS2 3.759965 673.5 80.416 53.4369 14789 14789 14780 QEplus033719.raw F4 704.9 614.7 785.7 421.7 875.5 638.6 396 4.15 1 FALSE 1.14E-05 5.46E-09 1.667 -250 63358 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTFGYGAR [K].qTFGYGAR.[L] N-Term(TMT6plex) 2 Q8BK64 Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Mus musculus OX=10090 GN=Ahsa1 PE=1 SV=2 Q8BK64; Q3TL79 Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Mus musculus OX=10090 GN=Ahsa1 PE=1 SV=2; Aha1_N domain-containing protein OS=Mus musculus OX=10090 GN=Ahsa1 PE=2 SV=1 0 2 2 0.6264 0 1 1 1 564.80438 1128.60149 1128.59992 1.39 0.00078 0/0 0 0 21940872 HCD 30 MS2 13.97834 1392.9 110 53.4394 14790 14790 14780 QEplus033719.raw F4 1454.1 1196.2 1505.3 1163.4 1627.5 1411.2 133 2.65 1 FALSE 0.0002719 0.005456 0.491 -250 63364 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEVIVR [K].eEVIVR.[S] N-Term(TMT6plex) 2 Q99P72 Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4 PE=1 SV=2 Q99P72-3; Q99P72 Isoform D of Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4; Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4 PE=1 SV=2 0 2 2 0.2304 0 1 1 1 487.29721 973.58714 973.58796 -0.84 -0.00041 0/0 0 0 19579082 HCD 30 MS2 19.46016 1094.7 87.707 53.4467 14792 14792 14791 QEplus033719.raw F4 1228.7 651.1 1115.2 1131.6 1003.3 1438.1 139 2.17 1 FALSE 0.003682 0.07064 0.086 -250 63367 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFYHYR [K].eFYHYR.[D] N-Term(TMT6plex) 7 Q8R5G0 Nidogen 2 protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1 Q8C6Z2; Q8R5G0; A0A286YCQ5; Q3US45; Q3TPN0; Q8CFA3; O88322 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen 2 protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen-2 (Fragment) OS=Mus musculus OX=10090 GN=Nid2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen-2 OS=Mus musculus OX=10090 GN=NID-2 PE=4 SV=1; Nidogen-2 OS=Mus musculus OX=10090 GN=Nid2 PE=1 SV=2 0 3 3 0.4601 0 1 1 1 381.86478 1143.57978 1143.57846 1.15 0.00044 0/0 0 0 14144559 HCD 30 MS2 50.53641 427.3 61.855 53.449 14793 14793 14791 QEplus033719.raw F4 402.6 369.8 493 395.5 438.2 464.7 69 2.76 1 FALSE 0.004599 0.08173 0.057 -250 63372 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLENAEGAR [K].vLENAEGAR.[T] N-Term(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 0 2 2 0.5585 0 1 1 1 594.33496 1187.66265 1187.65817 3.77 0.00224 0/0 0 0 89579848 HCD 30 MS2 47.48952 789.1 11.477 53.4512 14794 14794 14791 QEplus033719.raw F4 787.8 619.9 862.3 631.6 912.6 920.6 349 2.99 1 FALSE 1.14E-05 8.67E-06 1.059 -250 63380 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IMQIHSR [R].iMQIHSR.[K] N-Term(TMT6plex) 8 O88685 26S proteasome regulatory subunit 6A OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=2 Q3TKC2; Q3THI5; O88685; A2AGN7; B7ZCF1; Q8BUP7; Q3U8Y7; Q3TKG4 AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1; AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1; 26S proteasome regulatory subunit 6A OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=2; 26S proteasome regulatory subunit 6A OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=1; 26S proteasome regulatory subunit 6A OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=1; AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1; AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1; AAA domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1 0 3 3 0.6396 0 1 1 1 371.8851 1113.64075 1113.64001 0.66 0.00025 0/0 0 0 84988416 HCD 30 MS2 39.62786 289.2 11.542 53.4535 14795 14795 14791 QEplus033719.raw F4 298.6 229 327 256.2 319.9 304.3 176 3.33 1 FALSE 0.0007626 0.01069 0.393 -250 63389 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTEAVR [R].lTEAVR.[L] N-Term(TMT6plex) 5 Q7TPT7 Valyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1 Q3U3D3; G3UY93; Q3TII4; Q7TPT7; Q9Z1Q9 Valyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1; Valyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Vars PE=1 SV=1; Valyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1; Valyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1; Valine--tRNA ligase OS=Mus musculus OX=10090 GN=Vars1 PE=1 SV=1 0 2 2 0.1055 0 1 1 1 459.28494 917.56261 917.56175 0.94 0.00043 0/0 0 0 70708128 HCD 30 MS2 22.07323 733.9 17.759 53.4557 14796 14796 14791 QEplus033719.raw F4 869.7 640.6 785.7 618.9 722.8 765.8 196 2.37 1 FALSE 0.003015 0.05903 0.117 -250 63399 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YFGGTEDR [R].yFGGTEDR.[L] N-Term(TMT6plex) 1 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 0 2 2 0.6044 0 1 1 1 587.29102 1173.57475 1173.57377 0.84 0.00049 0/0 0 0 17440964 HCD 30 MS2 25.48293 1355.8 110 53.4583 14797 14797 14791 QEplus033719.raw F4 1407.1 1322.7 1487 1067.4 1645.8 1204.5 44 3.16 1 FALSE 0.001607 0.02522 0.243 -250 63407 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQSGQTDPLQK [K].rQSGQTDPLQk.[E] N-Term(TMT6plex); K11(TMT6plex) 9 Q9JKF1; Q9D408 Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2;Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1 Q9JKF1; Q05CQ4; Q3TR56; Q8CGH5; Q9D408; Q8CDW9; Q80UW7; Q3TPD2; Q6ZQK2 Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2; Iqgap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Iqgap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; IQ motif containing GTPase activating protein 1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; MKIAA0051 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1 1 3 3 0.6284 0 1 1 1 572.66632 1715.98441 1715.98045 2.31 0.00132 0/0 0 0 16318130 HCD 30 MS2 25.35983 1019.5 110 53.4608 14798 14798 14791 QEplus033719.raw F4 1024.8 878.1 1090.4 794.7 1180.4 1148.4 454 4.09 2 FALSE 1.14E-05 5.26E-10 1.86 -250 63413 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEITELRR [K].sEITELRR.[NT] N-Term(TMT6plex) 5 P13645 "SWISS-PROT:P13645 Tax_Id=9606 Gene_Symbol=KRT10 Keratin, type I cytoskeletal 10" P13645; P02535-2; P02535-3; A2A513; P02535-1 "SWISS-PROT:P13645 Tax_Id=9606 Gene_Symbol=KRT10 Keratin, type I cytoskeletal 10; Isoform 2 of Keratin, type I cytoskeletal 10 OS=Mus musculus OX=10090 GN=Krt10; Isoform 3 of Keratin, type I cytoskeletal 10 OS=Mus musculus OX=10090 GN=Krt10; Keratin, type I cytoskeletal 10 OS=Mus musculus OX=10090 GN=Krt10 PE=1 SV=1; SWISS-PROT:P02535-1 Tax_Id=10090 Gene_Symbol=Krt10 Isoform 1 of Keratin, type I cytoskeletal 10" 1 3 3 0.3482 0 1 1 1 411.57672 1232.71561 1232.71602 -0.33 -0.00014 0/0 0 0 10049548 HCD 30 MS2 36.2859 703.2 110 53.4632 14799 14799 14791 QEplus033719.raw F4 894.1 592.7 580.6 685.8 792.7 673.6 464 3.82 1 TRUE 1.14E-05 0.0003394 0.755 -250 63422 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATGNLHFR [K].aTGNLHFR.[A] N-Term(TMT6plex) 2 Q9D6K9 Ceramide synthase 5 OS=Mus musculus OX=10090 GN=Cers5 PE=1 SV=1 Q3UK15; Q9D6K9 TLC domain-containing protein OS=Mus musculus OX=10090 GN=Cers5 PE=2 SV=1; Ceramide synthase 5 OS=Mus musculus OX=10090 GN=Cers5 PE=1 SV=1 0 3 3 0.3898 0 1 1 1 382.21899 1144.64243 1144.64246 -0.02 -0.00001 0/0 0 0 9509127 HCD 30 MS2 69.17085 436.5 55.679 53.4655 14800 14800 14791 QEplus033719.raw F4 420.9 391.7 501.5 371.4 474.6 458.9 366 2.54 1 FALSE 0.0002719 0.005531 0.489 -250 63431 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQSDTAITK [R].gQSDTAITk.[D] N-Term(TMT6plex); K9(TMT6plex) 7 Q921D5 DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1 Q921D5; Q9D077; P49717; Q8C1Z0; Q5DTS8; Q3UA65; Q3UXG9 DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1; DNA replication licensing factor MCM4 OS=Mus musculus OX=10090 GN=Mcm4 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1; DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1; MCM_lid domain-containing protein OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1 0 2 2 0.5335 0 1 1 1 689.90021 1378.79314 1378.79422 -0.78 -0.00054 0/0 0 0 9224392 HCD 30 MS2 8.054312 721.8 110 53.468 14801 14801 14791 QEplus033719.raw F4 748.4 711.1 649.3 498.1 1108.3 615.6 416 3.13 1 FALSE 1.14E-05 3.45E-06 1.135 -250 63446 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEATLEAEQTR [R].tEATLEAEQTR.[R] N-Term(TMT6plex) 2 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2 0 2 2 0.7011 0 1 1 1 739.3891 1477.77092 1477.76957 0.92 0.00068 0/0 0 0 10664396 HCD 30 MS2 0 335.6 110 53.4778 14804 14804 14802 QEplus033719.raw F4 311.4 297.4 383.2 294.2 368.6 358.5 256 4.45 1 FALSE 1.14E-05 2.85E-09 1.721 -250 63465 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IMQIHSR [R].iMQIHSR.[K] N-Term(TMT6plex) 8 O88685 26S proteasome regulatory subunit 6A OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=2 Q3TKC2; Q3THI5; O88685; A2AGN7; B7ZCF1; Q8BUP7; Q3U8Y7; Q3TKG4 AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1; AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1; 26S proteasome regulatory subunit 6A OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=2; 26S proteasome regulatory subunit 6A OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=1; 26S proteasome regulatory subunit 6A OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=1; AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1; AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1; AAA domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1 0 2 2 0.5595 0 1 1 1 557.32483 1113.64238 1113.64001 2.13 0.00118 0/0 0 0 17254324 HCD 30 MS2 18.83886 752.5 95.388 53.4868 14808 14808 14802 QEplus033719.raw F4 724.3 594.6 824.5 679.2 744.2 948.4 174 2.27 1 FALSE 0.001429 0.02061 0.276 -250 63475 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VREYELR [K].vREYELR.[K] N-Term(TMT6plex) 3 Q8VC94 60S ribosomal protein L11 OS=Mus musculus OX=10090 GN=Rpl11 PE=2 SV=1 Q8VC94; A2BH06; Q9CXW4 60S ribosomal protein L11 OS=Mus musculus OX=10090 GN=Rpl11 PE=2 SV=1; 60S ribosomal protein L11 (Fragment) OS=Mus musculus OX=10090 GN=Rpl11 PE=1 SV=1; 60S ribosomal protein L11 OS=Mus musculus OX=10090 GN=Rpl11 PE=1 SV=4 1 3 3 0.3986 0 1 1 1 398.56662 1193.68531 1193.68399 1.1 0.00044 0/0 0 0 12889877 HCD 30 MS2 44.23222 755.4 60.233 53.4891 14809 14809 14802 QEplus033719.raw F4 742.6 716.8 861.9 572.5 857.8 780.9 423 2.96 1 FALSE 0.0001707 0.00388 0.531 -250 63483 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAQQELEEQTR [K].kAQQELEEQTR.[R] N-Term(TMT6plex); K1(TMT6plex) 2 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 1 2 2 0.7193 0 1 1 1 909.50995 1818.01262 1818.01215 0.26 0.00024 0/0 0 0 5284274.5 HCD 30 MS2 0 184.9 110 53.4916 14810 14810 14802 QEplus033719.raw F4 191 169 196.5 144 216.5 192.1 444 3.67 1 FALSE 1.14E-05 6.81E-09 1.649 -250 63490 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEDEEDNNLEVR [K].gEDEEDNNLEVR.[E] N-Term(TMT6plex) 4 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q91YQ5; Q5RKP4; Q3U900; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 0 2 2 0.7814 0 1 1 1 824.38684 1647.76641 1647.76594 0.28 0.00023 0/0 0 0 4950082.5 HCD 30 MS2 0 201.9 110 53.4941 14811 14811 14802 QEplus033719.raw F4 190.2 164.5 216.8 184.6 212 243.3 60 4.62 1 FALSE 1.14E-05 1.00E-10 1.997 -250 63501 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STGEPLGHVPAR [K].sTGEPLGHVPAR.[M] N-Term(TMT6plex) 4 Q8BFW7 Lipoma-preferred partner homolog OS=Mus musculus OX=10090 GN=Lpp PE=1 SV=1 Q8BFW7-2; Q8BFW7-5; Q8BFW7; Q8BFW7-3 Isoform 2 of Lipoma-preferred partner homolog OS=Mus musculus OX=10090 GN=Lpp; Isoform 5 of Lipoma-preferred partner homolog OS=Mus musculus OX=10090 GN=Lpp; Lipoma-preferred partner homolog OS=Mus musculus OX=10090 GN=Lpp PE=1 SV=1; Isoform 3 of Lipoma-preferred partner homolog OS=Mus musculus OX=10090 GN=Lpp 0 3 3 0.6256 0 1 1 1 483.93826 1449.80024 1449.80114 -0.63 -0.0003 0/0 0 0 35652020 HCD 30 MS2 22.87425 625.9 25.856 53.5037 14814 14814 14813 QEplus033719.raw F4 647.2 512.7 680.6 499.3 736.7 678.8 475 4.38 1 FALSE 1.14E-05 1.13E-09 1.797 -250 63509 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RKCEEELAK [R].rkcEEELAk.[L] N-Term(TMT6plex); K2(TMT6plex); C3(Carbamidomethyl); K9(TMT6plex) 2 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 Q61768; E9QAK5 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=1 2 4 4 0.4202 0 1 1 1 463.27484 1850.07754 1850.07728 0.14 0.00006 0/0 0 0 15775995 HCD 30 MS2 35.35437 751.4 69.353 53.506 14815 14815 14813 QEplus033719.raw F4 784 541.7 788.2 708.6 895.4 790.5 416 3.26 1 FALSE 0.0002419 0.005002 0.501 -250 63515 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVEETLR [R].sVEETLR.[L] N-Term(TMT6plex) 2 P20108 "Thioredoxin-dependent peroxide reductase, mitochondrial OS=Mus musculus OX=10090 GN=Prdx3 PE=1 SV=1" Q8K4K8; P20108 "Antioxidant protein OS=Mus musculus OX=10090 PE=4 SV=1; Thioredoxin-dependent peroxide reductase, mitochondrial OS=Mus musculus OX=10090 GN=Prdx3 PE=1 SV=1" 0 2 2 0.2892 0 1 1 1 531.80359 1062.5999 1062.59925 0.61 0.00032 0/0 0 0 57497912 HCD 30 MS2 37.84665 758.3 17.653 53.5082 14816 14816 14813 QEplus033719.raw F4 897.1 541.5 794.5 765.1 744.9 806.4 223 2.87 1 FALSE 0.0002419 0.004994 0.501 -250 63531 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPSQEPSAPGK [R].sPSQEPSAPGk.[A] N-Term(TMT6plex); K11(TMT6plex) 2 Q8JZQ9 Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=1 SV=1 Q8JZQ9; Q8CIJ3 Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=2 SV=1 0 3 3 0.5181 0 1 1 1 514.95654 1542.85508 1542.85279 1.48 0.00076 0/0 0 0 17234796 HCD 30 MS2 20.51837 900.6 96.995 53.5128 14818 14818 14813 QEplus033719.raw F4 1070.5 677.9 995.8 697.5 977 984.7 358 3.86 1 FALSE 1.14E-05 3.71E-05 0.939 -250 63537 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASVEDADTQNK [K].aSVEDADTQNk.[V] N-Term(TMT6plex); K11(TMT6plex) 1 Q3TPZ5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dctn2 PE=1 SV=1 Q3TPZ5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dctn2 PE=1 SV=1 0 3 3 0.4645 0 1 1 1 545.95776 1635.85874 1635.859 -0.16 -0.00009 0/0 0 0 13716992 HCD 30 MS2 26.36001 817.2 74.595 53.515 14819 14819 14813 QEplus033719.raw F4 1064.3 624.5 821.5 681.1 904 807.9 300 3.38 1 FALSE 1.14E-05 0.0001033 0.854 -250 63546 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLEDTK [K].gLEDTk.[S] N-Term(TMT6plex); K6(TMT6plex) 5 E9QPI5; F8WHU5 Sister chromatid cohesion protein PDS5 homolog A OS=Mus musculus OX=10090 GN=Pds5a PE=1 SV=1;Sister chromatid cohesion protein PDS5 homolog B OS=Mus musculus OX=10090 GN=Pds5b PE=1 SV=1 E9QPI5; F8WHU5; Q4VA53-3; Q6A026; Q4VA53 Sister chromatid cohesion protein PDS5 homolog A OS=Mus musculus OX=10090 GN=Pds5a PE=1 SV=1; Sister chromatid cohesion protein PDS5 homolog B OS=Mus musculus OX=10090 GN=Pds5b PE=1 SV=1; Isoform 3 of Sister chromatid cohesion protein PDS5 homolog B OS=Mus musculus OX=10090 GN=Pds5b; Sister chromatid cohesion protein PDS5 homolog A OS=Mus musculus OX=10090 GN=Pds5a PE=1 SV=3; Sister chromatid cohesion protein PDS5 homolog B OS=Mus musculus OX=10090 GN=Pds5b PE=1 SV=1 0 2 2 0.2071 0 1 1 1 560.83368 1120.66008 1120.66141 -1.19 -0.00066 0/0 0 0 9430775 HCD 30 MS2 68.63802 1116.6 110 53.5175 14820 14820 14813 QEplus033719.raw F4 1353.3 830.4 1072.9 1031.5 1315.5 1096.1 303 1.4 2 FALSE 0.005189 0.08872 0.038 -250 63561 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGEAMEQGLR [R].sGEAMEQGLR.[D] N-Term(TMT6plex) 1 B1AVZ0 Uracil phosphoribosyltransferase homolog OS=Mus musculus OX=10090 GN=Uprt PE=1 SV=1 B1AVZ0 Uracil phosphoribosyltransferase homolog OS=Mus musculus OX=10090 GN=Uprt PE=1 SV=1 0 2 2 0.618 0 1 1 1 653.83453 1306.66179 1306.66227 -0.36 -0.00024 0/0 0 0 4205953 HCD 30 MS2 31.07793 396.1 110 53.525 14823 14823 14813 QEplus033719.raw F4 391.7 313.7 430.9 341.1 461.5 437.7 201 3.22 1 FALSE 1.14E-05 1.27E-05 1.028 -250 63566 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETVVTSTTEPSR [K].eTVVTSTTEPSR.[C] N-Term(TMT6plex) 3 Q3U518 Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=2 SV=1 Q3U518; Q3TWG2; O08795-2 Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=2 SV=1; Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=2 SV=1; Isoform 2 of Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh 0 2 2 0.6906 0 1 1 1 768.41199 1535.8167 1535.81143 3.43 0.00263 0/0 0 0 4291567.5 HCD 30 MS2 13.5724 235.5 110 53.5324 14825 14825 14824 QEplus033719.raw F4 235.2 221.8 262 204.3 251.5 238.1 339 3.62 1 FALSE 1.14E-05 1.02E-06 1.236 -250 63574 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HMGIGK [R].hMGIGk.[R] N-Term(TMT6plex); K6(TMT6plex) 2 Q5I0T8 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 Q5I0T8; A2A547 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1; Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 0 2 2 0.7772 0 1 1 1 550.83691 1100.66655 1100.66506 1.36 0.00075 0/0 0 0 28379218 HCD 30 MS2 32.25712 1143.3 59.572 53.5346 14826 14826 14824 QEplus033719.raw F4 1172.7 844.7 1179.2 1008.7 1447.1 1207.5 274 1.93 1 FALSE 0.005838 0.09725 0.014 -250 63577 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NHAAPFSK [RK].nHAAPFSk.[V] N-Term(TMT6plex); K8(TMT6plex) 7 Q571M2; Q61699 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1;Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2 E9Q0U7; Q571M2; Q61699; Q61316; Q3U2G2; Q99L75; Q61699-2 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=1; Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Isoform HSP105-beta of Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 0 3 3 0.5726 0 1 1 1 443.92798 1329.76938 1329.76794 1.08 0.00048 0/0 0 0 30615894 HCD 30 MS2 46.98796 774.7 29.686 53.5369 14827 14827 14824 QEplus033719.raw F4 936.7 522.4 760 641 726.5 1061.6 408 3.72 2 FALSE 1.14E-05 0.0005699 0.711 -250 63586 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDQCYEDIR [K].nDQcYEDIR.[V] N-Term(TMT6plex); C4(Carbamidomethyl) 4 Q9WUM3 Coronin-1B OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1 D3YUG6; A0A494B9Y4; Q9WUM3; A0A494BAI1 Coronin (Fragment) OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1; Coronin (Fragment) OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1; Coronin-1B OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1; Coronin-1B OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1 0 2 2 0.6748 0 1 1 1 721.33344 1441.65959 1441.65791 1.17 0.00084 0/0 0 0 26824196 HCD 30 MS2 44.20267 565.6 58.4 53.5392 14828 14828 14824 QEplus033719.raw F4 533.5 521.5 649.7 456 756.4 476.5 25 3.29 1 FALSE 1.14E-05 2.05E-05 0.988 -250 63592 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDCKPGFQR [R].cDckPGFQR.[D] N-Term(TMT6plex); C1(Carbamidomethyl); C3(Carbamidomethyl); K4(TMT6plex) 3 P37889 Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 P37889-2; Q99K58; P37889 Isoform 2 of Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2; Fibulin 2 OS=Mus musculus OX=10090 GN=Fbln2 PE=2 SV=1; Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 0 3 3 0.4973 0 1 1 1 542.6153 1625.83133 1625.82924 1.29 0.0007 0/0 0 0 23231374 HCD 30 MS2 39.62329 1598.8 81.027 53.5414 14829 14829 14824 QEplus033719.raw F4 2057 1029.7 1586.6 2307.4 945.9 1666.5 234 1.83 1 FALSE 0.0008899 0.01235 0.368 -250 63599 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGQPGPVGPAGVR [R].sGQPGPVGPAGVR.[G] N-Term(TMT6plex) 5 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q91VL4; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Col1a2 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.5028 0 1 1 1 704.39984 1407.79241 1407.79058 1.3 0.00091 0/0 0 0 18340178 HCD 30 MS2 10.48947 930 110 53.5439 14830 14830 14824 QEplus033719.raw F4 905.4 705.1 976.3 941 1080.4 971.6 468 3.52 1 FALSE 1.14E-05 3.64E-06 1.131 -250 63635 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASVEDADTQNK [K].aSVEDADTQNk.[V] N-Term(TMT6plex); K11(TMT6plex) 1 Q3TPZ5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dctn2 PE=1 SV=1 Q3TPZ5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dctn2 PE=1 SV=1 0 2 2 0.7641 0 1 1 1 818.43323 1635.85918 1635.859 0.11 0.00009 0/0 0 0 7030137 HCD 30 MS2 0 489 110 53.554 14834 14834 14824 QEplus033719.raw F4 517.5 433.8 518.2 388.3 565.7 510.3 302 4.62 1 FALSE 1.14E-05 2.46E-10 1.923 -250 63643 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEATLEAEQTR [R].tEATLEAEQTR.[R] N-Term(TMT6plex) 2 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2 0 3 3 0.5347 0 1 1 1 493.2627 1477.77353 1477.76957 2.68 0.00132 0/0 0 0 8812016 HCD 30 MS2 62.86684 836.9 110 53.5613 14836 14836 14835 QEplus033719.raw F4 810.3 692.8 953.6 866 776 922.7 269 2.88 1 FALSE 1.14E-05 3.96E-05 0.934 -250 63650 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESQMTIEER [R].eSQMTIEER.[K] N-Term(TMT6plex) 8 E9Q3Z5 Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1 E9Q3Z5; E3VVQ8; Q7TMJ2; F6R6A4; Q8K4L2; Q8K4L3; Q8K4L3-3; A0A1B0GS91 Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin muscle-specific isoform OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1; Svil protein (Fragment) OS=Mus musculus OX=10090 GN=Svil PE=2 SV=2; Supervillin (Fragment) OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Archvillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Isoform 2 of Supervillin OS=Mus musculus OX=10090 GN=Svil; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1 0 2 2 0.4849 0 1 1 1 676.34064 1351.674 1351.6725 1.11 0.00075 0/0 0 0 4115555 HCD 30 MS2 54.78268 496.9 110 53.5638 14837 14837 14835 QEplus033719.raw F4 513 405.7 550.5 454.8 486.7 570.5 142 3.32 1 FALSE 1.14E-05 4.17E-05 0.93 -250 63656 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTGASGSFK [K].gTGASGSFk.[L] N-Term(TMT6plex); K9(TMT6plex) 9 P43274; Q1WWK3; P15864 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2;Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1;Histone H1.2 OS=Mus musculus OX=10090 GN=H1-2 PE=1 SV=2 P43274; Q1WWK3; I7HFT9; P43276; Q3UXH2; Q3U292; P15864; Q07133; P43277 "Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2; Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1; H1.6 linker histone, cluster member OS=Mus musculus OX=10090 GN=H1f6 PE=1 SV=1; Histone H1.5 OS=Mus musculus OX=10090 GN=H1-5 PE=1 SV=2; H15 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=H1f2 PE=2 SV=1; H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f3 PE=2 SV=1; Histone H1.2 OS=Mus musculus OX=10090 GN=H1-2 PE=1 SV=2; Histone H1t OS=Mus musculus OX=10090 GN=H1-6 PE=1 SV=4; Histone H1.3 OS=Mus musculus OX=10090 GN=H1-3 PE=1 SV=2" 0 2 2 0.5015 0 1 1 1 635.36383 1269.72038 1269.72032 0.05 0.00003 0/0 0 0 100807496 HCD 30 MS2 8.377439 1267.6 18.871 53.5661 14838 14838 14835 QEplus033719.raw F4 1220.9 1396.6 1309.9 748.7 2065.6 864 314 3.31 3 FALSE 1.14E-05 1.46E-05 1.016 -250 63666 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLGTDEK [R].gLGTDEk.[TA] N-Term(TMT6plex); K7(TMT6plex) 7 O35639 Annexin A3 OS=Mus musculus OX=10090 GN=Anxa3 PE=1 SV=4 O35639; Q8C1X9; Q3TET3; Q3TLP4; A0A0G2JGL7; Q3TFK4; Q3U737 Annexin A3 OS=Mus musculus OX=10090 GN=Anxa3 PE=1 SV=4; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin A3 (Fragment) OS=Mus musculus OX=10090 GN=Anxa3 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1 0 2 2 0.1126 0 1 1 1 589.3457 1177.68413 1177.68287 1.07 0.00063 0/0 0 0 38294512 HCD 30 MS2 20.78414 1360.4 47.402 53.5706 14840 14840 14835 QEplus033719.raw F4 1595.9 1245.4 1342.2 979.2 1960.1 1039.3 443 2.31 1 FALSE 0.002636 0.05251 0.135 -250 63680 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YYEDNK [K].yYEDNk.[Q] N-Term(TMT6plex); K6(TMT6plex) 5 Q8BME2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Mus musculus OX=10090 GN=Ndufa12 PE=2 SV=1 Q8BME2; F6RBR6; Q7TMF3; Q5M9K5; A0A0R4J275 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Mus musculus OX=10090 GN=Ndufa12 PE=2 SV=1; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Mus musculus OX=10090 GN=Ndufa12 PE=1 SV=2; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Mus musculus OX=10090 GN=Ndufa12 PE=1 SV=2; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Mus musculus OX=10090 GN=Ndufa12 PE=2 SV=1; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Mus musculus OX=10090 GN=Ndufa12 PE=1 SV=1 0 2 2 0.5822 0 1 1 1 645.34308 1289.67888 1289.67779 0.85 0.00055 0/0 0 0 12408581 HCD 30 MS2 45.61904 1210.6 110 53.5754 14842 14842 14835 QEplus033719.raw F4 1189.2 915.4 1287.2 1444.4 1104.6 1322.6 260 2.13 1 FALSE 0.004716 0.08293 0.054 -250 63687 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGHPNVLK [R].dGHPNVLk.[D] N-Term(TMT6plex); K8(TMT6plex) 4 Q8VD75 Huntingtin-interacting protein 1 OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=2 A0A1D5RMM7; Q8VD75; Q8C303; A0A0J9YUX9 Huntingtin-interacting protein 1 OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=1; Huntingtin-interacting protein 1 OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=2; ENTH domain-containing protein OS=Mus musculus OX=10090 GN=Hip1 PE=2 SV=1; Huntingtin-interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=1 0 3 3 0.5199 0 1 1 1 446.60272 1337.79361 1337.79416 -0.41 -0.00018 0/0 0 0 8004316 HCD 30 MS2 48.52174 932.2 110 53.5779 14843 14843 14835 QEplus033719.raw F4 1122.7 671 988 780.2 880.3 1151.2 337 2.77 1 FALSE 0.005246 0.08945 0.036 -250 63694 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVGGCQTK [K].mVGGcQTk.[S] N-Term(TMT6plex); C5(Carbamidomethyl); K8(TMT6plex) 2 B1AX98 Leucine rich repeat containing 47 OS=Mus musculus OX=10090 GN=Lrrc47 PE=1 SV=1 B1AX98; E9PV22 Leucine rich repeat containing 47 OS=Mus musculus OX=10090 GN=Lrrc47 PE=1 SV=1; Leucine-rich repeat-containing protein 47 OS=Mus musculus OX=10090 GN=Lrrc47 PE=1 SV=1 0 2 2 0.6019 0 1 1 1 669.87274 1338.73821 1338.7274 8.07 0.0054 0/0 0 0 4493716 HCD 30 MS2 17.2275 611.9 110 53.5805 14844 14844 14835 QEplus033719.raw F4 649 477.6 619.1 554.9 753.5 617.5 394 3.14 1 FALSE 1.14E-05 0.0001297 0.835 -250 63702 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSDPPEEAGR [R].lSDPPEEAGR.[-] N-Term(TMT6plex) 2 Q8K199 COX assembly mitochondrial protein 2 homolog OS=Mus musculus OX=10090 GN=Cmc2 PE=3 SV=1 Q8K199; F8WHQ0 COX assembly mitochondrial protein 2 homolog OS=Mus musculus OX=10090 GN=Cmc2 PE=3 SV=1; COX assembly mitochondrial protein OS=Mus musculus OX=10090 GN=Cmc2 PE=1 SV=1 0 2 2 0.5185 0 1 1 1 650.34229 1299.67729 1299.67421 2.37 0.00154 0/0 0 0 3087100.75 HCD 30 MS2 0 448.3 110 53.583 14845 14845 14835 QEplus033719.raw F4 458.4 367.8 456.1 408.7 518.7 480.2 188 3.24 1 FALSE 1.14E-05 5.31E-05 0.91 -250 63708 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNLLSR [K].sNLLSR.[F] N-Term(TMT6plex) 6 Q78ZJ8 RAB11B protein OS=Mus musculus OX=10090 GN=Rab11b PE=1 SV=1 Q78ZJ8; E9Q3P9; G3UY29; Q0PD45; A0A068BFR3; F8WGS1 RAB11B protein OS=Mus musculus OX=10090 GN=Rab11b PE=1 SV=1; Ras-related protein Rab-11A OS=Mus musculus OX=10090 GN=Rab11a PE=4 SV=1; Ras-related protein Rab-11B OS=Mus musculus OX=10090 GN=Rab11b PE=4 SV=1; Rab11A OS=Mus musculus OX=10090 GN=Rab11a PE=1 SV=1; RAS oncogene family protein OS=Mus musculus OX=10090 GN=Rab11b PE=2 SV=1; Ras-related protein Rab-11A (Fragment) OS=Mus musculus OX=10090 GN=Rab11a PE=4 SV=1 0 2 2 0.0645 0 1 1 1 459.78278 918.55828 918.557 1.39 0.00064 0/0 0 0 85854568 HCD 30 MS2 30.51122 575 11.709 53.5903 14847 14847 14846 QEplus033719.raw F4 595.6 489.8 619 466.9 655.3 623.7 71 2.17 1 FALSE 0.005349 0.09149 0.03 -250 63718 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSEVYK [K].dSEVYk.[M] N-Term(TMT6plex); K6(TMT6plex) 3 O70400 PDZ and LIM domain protein 1 OS=Mus musculus OX=10090 GN=Pdlim1 PE=1 SV=4 S4R1V0; Q3TZ17; O70400 PDZ and LIM domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Pdlim1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pdlim1 PE=2 SV=1; PDZ and LIM domain protein 1 OS=Mus musculus OX=10090 GN=Pdlim1 PE=1 SV=4 0 2 2 0.4271 0 1 1 1 599.8399 1198.67253 1198.67197 0.47 0.00028 0/0 0 0 23781350 HCD 30 MS2 0 1328.7 110 53.5928 14848 14848 14846 QEplus033719.raw F4 1458 1154.2 1237.8 1050.6 1876.3 1195.2 220 1.99 1 FALSE 0.005488 0.09301 0.026 -250 63729 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQASAISVGSR [K].aQASAISVGSR.[C] N-Term(TMT6plex) 1 Q9D1E6 Tubulin-folding cofactor B OS=Mus musculus OX=10090 GN=Tbcb PE=1 SV=2 Q9D1E6 Tubulin-folding cofactor B OS=Mus musculus OX=10090 GN=Tbcb PE=1 SV=2 0 2 2 0.5491 0 1 1 1 638.36499 1275.7227 1275.72183 0.69 0.00044 0/0 0 0 24332296 HCD 30 MS2 35.11069 653.1 57.687 53.5996 14851 14851 14846 QEplus033719.raw F4 606 643.5 676.1 559.3 775 658.7 389 3.77 1 FALSE 1.14E-05 1.57E-09 1.77 -250 63739 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVVAQAVR [K].aVVAQAVR.[H] N-Term(TMT6plex) 2 Q91YR7 Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1 Q91YR7; Q91YR7-2 Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1; Isoform 2 of Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 0 2 2 0.4854 0 1 1 1 521.83252 1042.65776 1042.65704 0.69 0.00036 0/0 0 0 19239084 HCD 30 MS2 31.9375 1010 110 53.6021 14852 14852 14846 QEplus033719.raw F4 934 954.8 1142 793.9 1091.8 1143.4 70 2.74 1 FALSE 1.14E-05 0.0003259 0.758 -250 63755 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SKVDDLR [R].skVDDLR.[G] N-Term(TMT6plex); K2(TMT6plex) 1 P62192 26S proteasome regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmc1 PE=1 SV=1 P62192 26S proteasome regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmc1 PE=1 SV=1 1 2 2 0.3678 0 1 1 1 645.8924 1290.77751 1290.77817 -0.51 -0.00033 0/0 0 0 13130008 HCD 30 MS2 59.6797 1257.2 110 53.6068 14854 14854 14846 QEplus033719.raw F4 1255.8 1006.3 1322.2 1372.2 1197.4 1389.3 525 1.74 1 FALSE 0.005081 0.08776 0.04 -250 63761 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NASTELK [K].nASTELk.[IF] N-Term(TMT6plex); K7(TMT6plex) 4 Q8BJY1 26S proteasome non-ATPase regulatory subunit 5 OS=Mus musculus OX=10090 GN=Psmd5 PE=1 SV=4 Q921U5; Q8BJY1; G3UYX5; F7BA91 Psmd5 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmd5 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 5 OS=Mus musculus OX=10090 GN=Psmd5 PE=1 SV=4; Regulator of G-protein signaling 22 OS=Mus musculus OX=10090 GN=Rgs22 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 5 (Fragment) OS=Mus musculus OX=10090 GN=Psmd5 PE=1 SV=1 0 2 2 0.4789 0 1 1 1 610.86584 1220.72441 1220.72507 -0.54 -0.00033 0/0 0 0 12037995 HCD 30 MS2 25.91003 1243.9 110 53.6094 14855 14855 14846 QEplus033719.raw F4 1443.8 842.4 1171.1 1366.8 1329.1 1310 421 2.61 1 FALSE 0.0002814 0.005608 0.487 -250 63765 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLDALTR [R].rLDALTR.[Q] N-Term(TMT6plex) 2 D3YVS1 Smoothelin OS=Mus musculus OX=10090 GN=Smtn PE=1 SV=1 D3YVS1; Q9D7A0 Smoothelin OS=Mus musculus OX=10090 GN=Smtn PE=1 SV=1; Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 GN=Smtn PE=2 SV=1 1 3 3 0.4089 0 1 1 1 358.5596 1073.66425 1073.66286 1.3 0.00046 0/0 0 0 6835065.5 HCD 30 MS2 18.01937 375.2 110 53.6118 14856 14856 14846 QEplus033719.raw F4 364.9 257.3 436.2 326.2 354.6 511.9 153 3.13 1 FALSE 0.001028 0.01353 0.352 -250 63791 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VREYELR [K].vREYELR.[K] N-Term(TMT6plex) 3 Q8VC94 60S ribosomal protein L11 OS=Mus musculus OX=10090 GN=Rpl11 PE=2 SV=1 Q8VC94; A2BH06; Q9CXW4 60S ribosomal protein L11 OS=Mus musculus OX=10090 GN=Rpl11 PE=2 SV=1; 60S ribosomal protein L11 (Fragment) OS=Mus musculus OX=10090 GN=Rpl11 PE=1 SV=1; 60S ribosomal protein L11 OS=Mus musculus OX=10090 GN=Rpl11 PE=1 SV=4 1 2 2 0.2995 0 1 1 1 597.34601 1193.68474 1193.68399 0.63 0.00038 0/0 0 0 17876516 HCD 30 MS2 49.52731 1033.5 84.265 53.6307 14863 14863 14857 QEplus033719.raw F4 1083.2 857.1 1109.9 903.8 1262 985.2 385 2.07 1 FALSE 0.001429 0.02066 0.276 -250 63805 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLQNCETGK [R].tLQNcETGk.[A] N-Term(TMT6plex); C5(Carbamidomethyl); K9(TMT6plex) 1 Q922B1 ADP-ribose glycohydrolase MACROD1 OS=Mus musculus OX=10090 GN=Macrod1 PE=1 SV=2 Q922B1 ADP-ribose glycohydrolase MACROD1 OS=Mus musculus OX=10090 GN=Macrod1 PE=1 SV=2 0 2 2 0.622 0 1 1 1 754.91089 1508.8145 1508.8143 0.13 0.0001 0/0 0 0 3292867.75 HCD 30 MS2 24.16305 322.7 110 53.6358 14865 14865 14857 QEplus033719.raw F4 379.1 209.6 314 413.7 242.6 377.3 332 4.18 1 FALSE 1.14E-05 3.73E-07 1.319 -250 63831 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVQEFR [K].dVQEFR.[K] N-Term(TMT6plex) 8 Q1PG84 PBK1 OS=Mus musculus domesticus OX=10092 GN=Rsl1d1 PE=2 SV=1 Q3TAJ5; Q1PG84; Q3TGI9; Q3TS64; Q3TH37; Q3TN25; Q8BVY0; Q3UL54 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; PBK1 OS=Mus musculus domesticus OX=10092 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Ribosomal L1 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rsl1d1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1 0 2 2 0.3304 0 1 1 1 511.77774 1022.5482 1022.54683 1.35 0.00069 0/0 0 0 25195978 HCD 30 MS2 44.48352 820.8 38.845 53.6476 14869 14869 14868 QEplus033719.raw F4 871.1 623.4 916.1 651.8 929.4 932.8 157 2.27 1 FALSE 0.002123 0.0397 0.176 -250 63839 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSATFK [R].nSATFk.[S] N-Term(TMT6plex); K6(TMT6plex) 7 A2AUD5 Tumor protein D54 OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1 A2AUD5; Q9CZ22; V9GWU5; Q9CYZ2; Q8BKP1; Q3TAI4; Q3TUJ9 Tumor protein D54 OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpd52l2 PE=2 SV=1; Tumor protein D54 (Fragment) OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=8; Tumor protein D54 OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1; Tumor protein D54 OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1; Tumor protein D54 OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1; Tumor protein D54 OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1 0 2 2 0.2332 0 1 1 1 563.33942 1125.67156 1125.66683 4.2 0.00236 0/0 0 0 13160389 HCD 30 MS2 38.37899 1354.5 110 53.6501 14870 14870 14868 QEplus033719.raw F4 2771.7 593.4 1004.3 1257.6 1426.6 1073.3 115 1.93 1 FALSE 0.00459 0.08106 0.059 -250 63855 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAPAPPK [K-].eAPAPPk.[A] N-Term(TMT6plex); K7(TMT6plex) 3 Q4V9X9 Rpl23a protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl23a PE=2 SV=1 Q4V9X9; Q91YK6; P62751 Rpl23a protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl23a PE=2 SV=1; Rpl23a protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl23a PE=2 SV=1; 60S ribosomal protein L23a OS=Mus musculus OX=10090 GN=Rpl23a PE=1 SV=1 0 2 2 0.5618 0 1 1 1 584.36188 1167.71648 1167.71378 2.31 0.00135 0/0 0 0 107442040 HCD 30 MS2 33.29246 794.7 11.249 53.6569 14873 14873 14868 QEplus033719.raw F4 843.5 637.3 839.5 597.5 979 871.2 136 2.51 1 FALSE 0.001946 0.03367 0.199 -250 63863 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITIQNR [K].iTIQNR.[VQA] N-Term(TMT6plex) 3 Q8CBR1-2; Q8CBR1-3; Q8CBR1 Isoform 2 of Immunoglobulin-like domain-containing receptor 1 OS=Mus musculus OX=10090 GN=Ildr1; Isoform 3 of Immunoglobulin-like domain-containing receptor 1 OS=Mus musculus OX=10090 GN=Ildr1; Immunoglobulin-like domain-containing receptor 1 OS=Mus musculus OX=10090 GN=Ildr1 PE=1 SV=2 0 2 2 0.0881 0 1 1 1 487.30347 973.59966 973.5992 0.47 0.00023 0/0 0 0 51722204 HCD 30 MS2 9.9798 693.7 22.183 53.6591 14874 14874 14868 QEplus033719.raw F4 652 645.8 820.9 530.5 707.2 805.6 109 2.27 2 FALSE 0.005414 0.0924 0.028 -250 63864 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITLQNR [K].iTLQNR.[VQA] N-Term(TMT6plex) 3 Q811G0-2; F6XSQ3; Q811G0 Isoform 2 of Protein PTHB1 OS=Mus musculus OX=10090 GN=Bbs9; Protein PTHB1 (Fragment) OS=Mus musculus OX=10090 GN=Bbs9 PE=4 SV=2; Protein PTHB1 OS=Mus musculus OX=10090 GN=Bbs9 PE=1 SV=2 0 2 2 0.0881 0 1 2 2 487.30347 973.59966 973.5992 0.47 0.00023 0/0 0 0 51722204 HCD 30 MS2 9.9798 693.7 22.183 53.6591 14874 14874 14868 QEplus033719.raw F4 652 645.8 820.9 530.5 707.2 805.6 109 2.27 2 FALSE 0.005414 0.0924 0.028 -250 63865 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTIQNR [K].lTIQNR.[VQA] N-Term(TMT6plex) 4 Q5BLK0; Q8C2K0 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=1 SV=1;60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1 Q6DI58; Q3TIQ2; Q5BLK0; Q8C2K0 Rpl12 protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1; 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1; 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=1 SV=1; 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1 0 2 2 0.0881 0 1 3 3 487.30347 973.59966 973.5992 0.47 0.00023 0/0 0 0 51722204 HCD 30 MS2 9.9798 693.7 22.183 53.6591 14874 14874 14868 QEplus033719.raw F4 652 645.8 820.9 530.5 707.2 805.6 109 2.27 2 FALSE 0.005414 0.0924 0.028 -250 63873 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVQDGIAPR [K].eVQDGIAPR.[M] N-Term(TMT6plex) 2 P56399 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 P56399; Q3U4W8 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 0 2 2 0.4682 0 1 1 1 607.34137 1213.67546 1213.67382 1.36 0.00082 0/0 0 0 42996792 HCD 30 MS2 22.84972 777.4 35.036 53.6614 14875 14875 14868 QEplus033719.raw F4 848 655.3 799.2 644.4 930.8 786.5 242 2.99 1 FALSE 5.44E-05 0.002031 0.597 -250 63881 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVDEALR [R].sVDEALR.[L] N-Term(TMT6plex) 2 Q61171 Peroxiredoxin-2 OS=Mus musculus OX=10090 GN=Prdx2 PE=1 SV=3 Q5M9N9; Q61171 Prdx2 protein OS=Mus musculus OX=10090 GN=Prdx2 PE=2 SV=1; Peroxiredoxin-2 OS=Mus musculus OX=10090 GN=Prdx2 PE=1 SV=3 0 2 2 0.249 0 1 1 1 509.79068 1018.57408 1018.57304 1.02 0.00052 0/0 0 0 29026300 HCD 30 MS2 22.81624 964.4 53 53.6637 14876 14876 14868 QEplus033719.raw F4 1463 674.5 923.7 715.3 1123.4 886.3 199 2.53 1 FALSE 0.0002814 0.005709 0.485 -250 63890 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LWTGAHR [R].lWTGAHR.[L] N-Term(TMT6plex) 1 Q8C3X8 Lipase maturation factor 2 OS=Mus musculus OX=10090 GN=Lmf2 PE=1 SV=1 Q8C3X8 Lipase maturation factor 2 OS=Mus musculus OX=10090 GN=Lmf2 PE=1 SV=1 0 3 3 0.51 0 1 1 1 357.20901 1069.61249 1069.61043 1.93 0.00069 0/0 0 0 9300551 HCD 30 MS2 30.91701 377.1 68.704 53.6659 14877 14877 14868 QEplus033719.raw F4 347.5 336.1 425.3 306.4 468.5 379 145 3 1 FALSE 1.14E-05 0.000641 0.701 -250 63897 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAYVGENVR [K].tAYVGENVR.[F] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.5584 0 1 1 1 619.34125 1237.67522 1237.67382 1.13 0.0007 0/0 0 0 7694359 HCD 30 MS2 46.55898 768.9 110 53.6684 14878 14878 14868 QEplus033719.raw F4 1043.8 312.1 563.2 1176.7 603.1 914.3 358 3.17 2 FALSE 1.14E-05 6.72E-05 0.89 -250 63906 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMGTPDVR [K].eMGTPDVR.[I] N-Term(TMT6plex) 4 P62900 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1 P62900; Q9CY93; A0A0A6YXL3; A0A0A6YX26 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=2 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1 0 2 2 0.5918 0 1 1 1 567.29578 1133.58428 1133.58222 1.81 0.00103 0/0 0 0 25127288 HCD 30 MS2 26.55638 751.5 55.935 53.6757 14880 14880 14879 QEplus033719.raw F4 809.1 593.2 829.1 689.8 759.2 828.9 188 2.45 1 FALSE 0.0002814 0.005585 0.488 -250 63923 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTGASGSFK [K].gTGASGSFk.[L] N-Term(TMT6plex); K9(TMT6plex) 9 P43274; Q1WWK3; P15864 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2;Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1;Histone H1.2 OS=Mus musculus OX=10090 GN=H1-2 PE=1 SV=2 P43274; Q1WWK3; I7HFT9; P43276; Q3UXH2; Q3U292; P15864; Q07133; P43277 "Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2; Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1; H1.6 linker histone, cluster member OS=Mus musculus OX=10090 GN=H1f6 PE=1 SV=1; Histone H1.5 OS=Mus musculus OX=10090 GN=H1-5 PE=1 SV=2; H15 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=H1f2 PE=2 SV=1; H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f3 PE=2 SV=1; Histone H1.2 OS=Mus musculus OX=10090 GN=H1-2 PE=1 SV=2; Histone H1t OS=Mus musculus OX=10090 GN=H1-6 PE=1 SV=4; Histone H1.3 OS=Mus musculus OX=10090 GN=H1-3 PE=1 SV=2" 0 3 3 0.4425 0 1 1 1 423.91241 1269.72269 1269.72032 1.87 0.00079 0/0 0 0 130490496 HCD 30 MS2 37.03592 484.8 7.255 53.6802 14882 14882 14879 QEplus033719.raw F4 441.6 437.7 497.2 357.3 725.9 448.8 297 2.87 3 FALSE 0.000108 0.003079 0.555 -250 63930 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVSDVQK [R].qVSDVQk.[R] N-Term(TMT6plex); K7(TMT6plex) 3 Q5EBP9 Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 Q62318-2; Q5EBP9; Q3UDN8 Isoform 2 of Transcription intermediary factor 1-beta OS=Mus musculus OX=10090 GN=Trim28; Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 0 2 2 0.1843 0 1 1 1 631.38037 1261.75347 1261.75162 1.46 0.00092 0/0 0 0 16926542 HCD 30 MS2 19.92818 1284.2 110 53.6828 14883 14883 14879 QEplus033719.raw F4 1571.3 1041.4 1397.8 962.4 1531.1 1201 587 2.55 1 FALSE 0.0006294 0.009384 0.415 -250 63962 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETAGLK [K].eTAGLk.[V] N-Term(TMT6plex); K6(TMT6plex) 7 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; Q3UGC3; E9QA15; E9Q0M9; D3Z6I7; S4R1T7; E9QA16 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 0 2 2 0.1729 0 1 1 1 538.83936 1076.67143 1076.67158 -0.14 -0.00007 0/0 0 0 7286052 HCD 30 MS2 43.5381 1176.2 110 53.6925 14887 14887 14879 QEplus033719.raw F4 1531.2 920.4 1235.4 911.7 1365.8 1092.8 193 2.14 1 FALSE 0.002869 0.05605 0.125 -250 63967 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSQECEK [R].lSQEcEk.[L] N-Term(TMT6plex); C5(Carbamidomethyl); K7(TMT6plex) 4 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 0 2 2 0.3952 0 1 1 1 676.36835 1351.72942 1351.72917 0.18 0.00012 0/0 0 0 6894580.5 HCD 30 MS2 31.32648 624.2 110 53.695 14888 14888 14879 QEplus033719.raw F4 748 483.4 644.8 592.5 649.4 627.2 330 2.91 1 FALSE 0.0002218 0.004693 0.509 -250 63982 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGGSLPFR [K].rGGSLPFR.[H] N-Term(TMT6plex) 3 E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; E9PZ16; Q2XQV0 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Perlecan (Fragment) OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1 1 3 3 0.3593 0 1 1 1 373.55948 1118.66388 1118.66319 0.62 0.00023 0/0 0 0 122707320 HCD 30 MS2 42.81452 337 6.563 53.7093 14893 14893 14890 QEplus033719.raw F4 318.7 271.3 393.7 306.1 336.8 395.5 220 3.59 1 FALSE 0.0002814 0.005549 0.488 -250 63998 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NHAAPFSK [RK].nHAAPFSk.[V] N-Term(TMT6plex); K8(TMT6plex) 7 Q571M2; Q61699 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1;Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2 E9Q0U7; Q571M2; Q61699; Q61316; Q3U2G2; Q99L75; Q61699-2 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=1; Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Isoform HSP105-beta of Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 0 2 2 0.483 0 1 1 1 665.38733 1329.76738 1329.76794 -0.42 -0.00028 0/0 0 0 8812411 HCD 30 MS2 0 516.8 110 53.7193 14897 14897 14890 QEplus033719.raw F4 557 415.8 568.8 457.2 571.5 530.6 422 3.23 2 FALSE 1.14E-05 7.27E-05 0.883 -250 64007 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QMMDVSR [K].qMMDVSR.[T] N-Term(TMT6plex) 3 Q8BI84 Transport and Golgi organization protein 1 homolog OS=Mus musculus OX=10090 GN=Mia3 PE=1 SV=2 Q8BI84; Q8BI84-3; A0A0R4J2D3 Transport and Golgi organization protein 1 homolog OS=Mus musculus OX=10090 GN=Mia3 PE=1 SV=2; Isoform 3 of Transport and Golgi organization protein 1 homolog OS=Mus musculus OX=10090 GN=Mia3; Transport and Golgi organization protein 1 homolog OS=Mus musculus OX=10090 GN=Mia3 PE=1 SV=3 0 2 2 0.3022 0 1 1 1 548.27948 1095.55168 1095.54882 2.62 0.00143 0/0 0 0 4672943 HCD 30 MS2 0 559.3 110 53.7218 14898 14898 14890 QEplus033719.raw F4 764.2 441.1 550.9 477.4 624.5 497.9 90 1.82 1 FALSE 0.001615 0.0264 0.236 -250 64016 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTEAAAAQREEWK [R].hTEAAAAQREEWk.[M] N-Term(TMT6plex); K13(TMT6plex) 3 Q60668 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2 Q60668; Q3UXC8; Q60668-3 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=2 SV=1; Isoform 3 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd 1 4 4 0.5281 0 1 1 1 497.0209 1985.06179 1985.06049 0.65 0.00032 0/0 0 0 26370694 HCD 30 MS2 45.29589 607.2 44.632 53.7241 14899 14899 14890 QEplus033719.raw F4 651.4 563.5 714.2 451.2 661.8 601.2 401 3.92 1 FALSE 1.14E-05 6.38E-08 1.464 -250 64025 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNILER [K].sNILER.[N] N-Term(TMT6plex) 6 Q3UJ44 Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=2 SV=1 D3YTL5; Q3UJ44; Q3TNN6; D3YU77; Q99LB4; P24452 Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Capg PE=1 SV=1; Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=2 SV=1; Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=2 SV=1; Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Capg PE=1 SV=1; Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=1 SV=1; Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=1 SV=2 0 2 2 0.0606 0 1 1 1 480.78708 960.56688 960.56756 -0.71 -0.00034 0/0 0 0 16021577 HCD 30 MS2 30.99565 815.7 49.151 53.7264 14900 14900 14890 QEplus033719.raw F4 892.3 725.4 888.3 628 862.2 898.2 208 1.98 1 FALSE 0.007275 0.1159 -0.033 -250 64035 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHSGMDGLK [K].gHSGMDGLk.[G] N-Term(TMT6plex); K9(TMT6plex) 3 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 3 3 0.6895 0 1 1 1 453.91922 1359.74311 1359.74549 -1.75 -0.00079 0/0 0 0 15379440 HCD 30 MS2 25.88651 627.4 54.287 53.7336 14902 14902 14901 QEplus033719.raw F4 758.6 515.7 628.6 521.5 758.2 581.7 309 4.38 1 FALSE 1.14E-05 6.24E-08 1.466 -250 64051 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVSMDDHK [K].eVSMDDHk.[L] N-Term(TMT6plex); K8(TMT6plex) 2 Q8VDN2 Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1 Q3TXF9; Q8VDN2 Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1 0 3 3 0.0854 0 1 1 1 473.58359 1418.73621 1418.73499 0.86 0.00041 0/0 0 0 21899180 HCD 30 MS2 30.97605 922.8 54.071 53.7384 14904 14904 14901 QEplus033719.raw F4 1361.9 654.2 900.3 794.7 902.9 922.9 232 2.46 1 FALSE 1.14E-05 1.03E-05 1.045 -250 64057 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLPAHDQDPSK [K].qLPAHDQDPSk.[C] N-Term(TMT6plex); K11(TMT6plex) 8 Q3ULB1 Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1 D6RH72; Q99L61; P47226-2; P47226; Q3ULB1; Q921W7; Q3V085; B1AXB9 Testin (Fragment) OS=Mus musculus OX=10090 GN=Tes PE=1 SV=2; Testin OS=Mus musculus OX=10090 GN=Tes PE=2 SV=1; Isoform TES1 of Testin OS=Mus musculus OX=10090 GN=Tes; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=2; Testin OS=Mus musculus OX=10090 GN=Tesl1 PE=2 SV=1; Testin OS=Mus musculus OX=10090 GN=Tesl1 PE=1 SV=1 0 3 3 0.6917 0 1 1 1 565.31427 1693.92826 1693.92735 0.53 0.0003 0/0 0 0 13146350 HCD 30 MS2 26.23897 711.4 110 53.7409 14905 14905 14901 QEplus033719.raw F4 779.1 618.6 742.6 600.7 784.4 743 426 4.93 1 FALSE 1.14E-05 4.21E-11 2.068 -250 64066 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FHTVSGSK [K].fHTVSGSk.[C] N-Term(TMT6plex); K8(TMT6plex) 6 Q544Z3 S1 protein D2 OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1 Q9D6G1; Q8CIR3; Q80XR6; Q544Z3; Q20BD0; Q3TMZ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1; CArG-binding factor A (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; S1 protein D2 OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1 0 3 3 0.5782 0 1 1 1 440.92746 1320.76783 1320.76761 0.17 0.00007 0/0 0 0 10685489 HCD 30 MS2 33.19408 862.4 110 53.7434 14906 14906 14901 QEplus033719.raw F4 1091.2 696.6 807.7 699.6 1238.3 641.1 479 2.75 1 FALSE 0.00192 0.03301 0.202 -250 64072 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEQQAFK [K].qEQQAFk.[Q] N-Term(TMT6plex); K7(TMT6plex) 1 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 0 2 2 0.3702 0 1 1 1 668.88538 1336.76348 1336.76252 0.71 0.00048 0/0 0 0 8346013.5 HCD 30 MS2 33.22976 903.6 110 53.7484 14908 14908 14901 QEplus033719.raw F4 880.4 776.8 881.7 846.4 1208.1 828.2 439 2.89 1 FALSE 0.0002419 0.004846 0.505 -250 64084 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANEEDEQEEGGDGASGDPKK [K].aNEEDEQEEGGDGASGDPkk.[E] N-Term(TMT6plex); K19(TMT6plex); K20(TMT6plex) 1 B2RTB0 PDGFA associated protein 1 OS=Mus musculus OX=10090 GN=Pdap1 PE=1 SV=1 B2RTB0 PDGFA associated protein 1 OS=Mus musculus OX=10090 GN=Pdap1 PE=1 SV=1 1 3 3 0.8367 0 1 1 1 917.1167 2749.33554 2749.33674 -0.43 -0.0004 0/0 0 0 7708384.5 HCD 30 MS2 0 238.8 110 53.7534 14910 14910 14901 QEplus033719.raw F4 256.8 217.1 269.5 173.1 288.5 227.8 191 4.96 1 FALSE 1.14E-05 6.31E-16 4.906 -250 64092 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTEAAAAQREEWK [R].hTEAAAAQREEWk.[M] N-Term(TMT6plex); K13(TMT6plex) 3 Q60668 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2 Q60668; Q3UXC8; Q60668-3 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=2 SV=1; Isoform 3 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd 1 3 3 0.516 0 1 1 1 662.35968 1985.06449 1985.06049 2.01 0.00133 0/0 0 0 3998736.5 HCD 30 MS2 0 385.2 110 53.7559 14911 14911 14901 QEplus033719.raw F4 406.6 423.1 490 238.6 387.7 365.4 398 4.05 1 FALSE 1.14E-05 2.81E-12 2.291 -250 64100 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSQDGKVTVETEDSR [K].sSQDGkVTVETEDSR.[T] N-Term(TMT6plex); K6(TMT6plex) 2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 Q1WNQ4; P13541 Embryonic myosin heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 3 3 0.6538 0 1 1 1 699.36829 2096.09031 2096.08716 1.5 0.00105 0/0 0 0 8354910.5 HCD 30 MS2 0 293.4 110 53.7658 14914 14914 14912 QEplus033719.raw F4 360.1 87.2 306.9 515.9 76.2 414.3 329 3.38 1 FALSE 1.14E-05 1.93E-10 1.943 -250 64107 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGFAGDDAPR [K].aGFAGDDAPR.[A] N-Term(TMT6plex) 36 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q3UAF6; Q3UD81; Q3U122; E9Q1F2; Q3UAA9; F6WX90; A0A1D5RM20; B2RRX1; A0A494B9T3; Q3U5R4; A1E281; Q3UAF7; G3UZ07; P62737; G3UYG0; P68134; Q3UBP6; D3YZY0; E9Q5F4; B1ATY1; P68033; P63260; Q61852; Q3UA89; Q3UGS0; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=4 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 2 2 0.7138 0 1 1 1 603.30933 1205.61138 1205.61122 0.13 0.00008 0/0 0 0 13564907 HCD 30 MS2 22.43708 951.1 110 53.7683 14915 14915 14912 QEplus033719.raw F4 950.8 790.2 1027.1 890.5 1018.3 1029.7 149 3.11 4 FALSE 1.14E-05 3.86E-07 1.316 -250 64114 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSQPLASK [K].sSQPLASk.[Q] N-Term(TMT6plex); K8(TMT6plex) 8 A0A384DV79; A0A338P6F6 High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1;High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1 A0A338P6E8; A0A384DV79; A0A338P6F6; Q566K0; A0A338P6G6; Q3TVP0; Q3TE85; A0A338P6D0 High mobility group AT-hook protein 1 OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1; High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1; High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1; High mobility group AT-hook protein 1 OS=Mus musculus OX=10090 GN=Hmga1 PE=2 SV=1; High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1; High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1 0 2 2 0.557 0 1 1 1 638.38757 1275.76787 1275.76727 0.47 0.0003 0/0 0 0 10212053 HCD 30 MS2 50.64436 1000.6 110 53.7708 14916 14916 14912 QEplus033719.raw F4 988.4 1195.5 1104.1 708.2 1201.9 805.6 533 3.07 2 FALSE 1.14E-05 8.00E-05 0.876 -250 64122 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLQPTVR [K].kLQPTVR.[TN] N-Term(TMT6plex); K1(TMT6plex) 19 Q7TSJ7; Q5NCK8 Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk8 PE=1 SV=1;Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk9 PE=2 SV=1 Q7TSJ7; Q61831-2; Q5NCK8; A0A5F8MP75; Q80W81; Q80W82; Q91Y86; Q8C094; Q9WTU6; Q80W80; G3X8U9; A6P3E4; Q9WTU6-2; Q9WTU6-3; E9QN59; Q3TQZ7; Q61831; Q8C9D4; Q78GB8 Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk8 PE=1 SV=1; Isoform Alpha-1 of Mitogen-activated protein kinase 10 OS=Mus musculus OX=10090 GN=Mapk10; Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk9 PE=2 SV=1; Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk10 PE=1 SV=1; Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk10 PE=2 SV=1; Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk10 PE=1 SV=1; Mitogen-activated protein kinase 8 OS=Mus musculus OX=10090 GN=Mapk8 PE=1 SV=1; Mitogen-activated protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Mapk9 PE=2 SV=1; Mitogen-activated protein kinase 9 OS=Mus musculus OX=10090 GN=Mapk9 PE=1 SV=2; Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk10 PE=1 SV=1; Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk8 PE=1 SV=1; Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk8 PE=1 SV=1; Isoform Alpha-1 of Mitogen-activated protein kinase 9 OS=Mus musculus OX=10090 GN=Mapk9; Isoform Beta-1 of Mitogen-activated protein kinase 9 OS=Mus musculus OX=10090 GN=Mapk9; Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk10 PE=1 SV=1; Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk10 PE=1 SV=1; Mitogen-activated protein kinase 10 OS=Mus musculus OX=10090 GN=Mapk10 PE=1 SV=2; Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk10 PE=1 SV=1; Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk10 PE=1 SV=1 1 3 3 0.3333 0 1 1 1 433.9549 1299.85013 1299.85128 -0.88 -0.00038 0/0 0 0 6149082.5 HCD 30 MS2 68.05099 1228.5 110 53.7733 14917 14917 14912 QEplus033719.raw F4 1504.1 784.1 1253.4 1167.3 1083.3 1578.5 200 1.89 2 FALSE 0.004181 0.07662 0.07 -250 64130 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQCCYNCGKPGHLAR [R].eQccYNcGkPGHLAR.[D] N-Term(TMT6plex); C3(Carbamidomethyl); C4(Carbamidomethyl); C7(Carbamidomethyl); K9(TMT6plex) 5 Q3ULK8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=1 Q3ULK8; P53996-2; Q3U5V2; A0A0N4SVS6; P53996 Uncharacterized protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=1; Isoform 2 of Cellular nucleic acid-binding protein OS=Mus musculus OX=10090 GN=Cnbp; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cnbp PE=2 SV=1; Cellular nucleic acid-binding protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=1; Cellular nucleic acid-binding protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=2 0 4 4 0.7538 0 1 1 1 577.78448 2308.11611 2308.11493 0.51 0.00029 0/0 0 0 16305424 HCD 30 MS2 35.51706 894.2 110 53.7758 14918 14918 14912 QEplus033719.raw F4 957.2 801.3 965.7 711.4 1075 854.4 155 4.59 1 FALSE 1.14E-05 4.76E-08 1.489 -250 64143 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIGYDDSSK [K].hIGYDDSSk.[G] N-Term(TMT6plex); K9(TMT6plex) 8 Q99J57 S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=1 SV=1 A0A0U1RNT6; Q99J57; A0A0U1RQ95; A0A0U1RNK6; Q3TSS0; Q3TED1; Q6PE05; Q3UZA2 S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=1 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=1 SV=1; S-adenosylmethionine synthase isoform type-2 (Fragment) OS=Mus musculus OX=10090 GN=Mat2a PE=1 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=1 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=2 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=2 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=2 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=2 SV=1 0 3 3 0.7271 0 1 1 1 493.93393 1479.78724 1479.78438 1.93 0.00095 0/0 0 0 11258256 HCD 30 MS2 29.14132 916.2 110 53.7808 14920 14920 14912 QEplus033719.raw F4 966.2 693.5 1000.3 889.8 1019.7 927.4 315 4.25 1 FALSE 1.14E-05 1.76E-08 1.57 -250 64159 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IRELETR [K].iRELETR.[L] N-Term(TMT6plex) 15 A0A4Y5WWJ7 Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1 E9Q405; Q6PER1; Q9JMH9-6; A0A1C7ZN10; E9QAX2; Q9JMH9-5; Q9JMH9-4; Q9JMH9-1; B2RRE2; A0A4Y5WWJ7; Q9JMH9-2; K3W4L0; Q9JMH9-7; Q9JMH9; E9QA74 Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Myo18a protein (Fragment) OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1; Isoform 6 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 5 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Isoform 4 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Isoform 1 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Myo18a protein OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1; Isoform 2 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 7 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=2; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1 1 3 3 0.3705 0 1 1 1 382.56592 1145.6832 1145.68399 -0.69 -0.00026 0/0 0 0 6419840.5 HCD 30 MS2 27.53554 357.4 110 53.793 14924 14924 14923 QEplus033719.raw F4 374.9 242 407.9 332.8 316 470.6 333 2.51 1 FALSE 0.00268 0.05328 0.133 -250 64171 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECLAHTPK [K].ecLAHTPk.[L] N-Term(TMT6plex); C2(Carbamidomethyl); K8(TMT6plex) 1 O09131 Glutathione S-transferase omega-1 OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=2 O09131 Glutathione S-transferase omega-1 OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=2 0 3 3 0.6647 0 1 1 1 471.93591 1413.79319 1413.79244 0.53 0.00025 0/0 0 0 29193568 HCD 30 MS2 4.985778 499.1 38.6 53.7978 14926 14926 14923 QEplus033719.raw F4 532.5 484.9 572.6 397.8 469.4 537.5 372 3.31 1 FALSE 1.14E-05 5.33E-05 0.909 -250 64183 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NASEDEIK [K].nASEDEIk.[K] N-Term(TMT6plex); K8(TMT6plex) 6 Q3UL32 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnajc7 PE=2 SV=1 Q3UL32; A0A6I8MX00; A2A5E1; A0A6I8MWZ1; A0A6I8MWX8; Q9QYI3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnajc7 PE=2 SV=1; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=2; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=2 0 2 2 0.4968 0 1 1 1 682.37805 1363.74883 1363.74693 1.39 0.00095 0/0 0 0 3697313.75 HCD 30 MS2 0 360.4 110 53.8028 14928 14928 14923 QEplus033719.raw F4 374.1 286.6 390.5 276.9 446.6 387.7 368 3.12 1 FALSE 1.14E-05 0.0001593 0.818 -250 64197 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGHPNVLK [R].dGHPNVLk.[D] N-Term(TMT6plex); K8(TMT6plex) 4 Q8VD75 Huntingtin-interacting protein 1 OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=2 A0A1D5RMM7; Q8VD75; Q8C303; A0A0J9YUX9 Huntingtin-interacting protein 1 OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=1; Huntingtin-interacting protein 1 OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=2; ENTH domain-containing protein OS=Mus musculus OX=10090 GN=Hip1 PE=2 SV=1; Huntingtin-interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hip1 PE=1 SV=1 0 3 3 0.5479 0 1 1 1 446.60574 1337.80268 1337.79416 6.37 0.00284 0/0 0 0 10372820 HCD 30 MS2 47.03715 597.6 75.595 53.8076 14930 14930 14923 QEplus033719.raw F4 673.5 439.1 624 540.3 582.5 726.5 262 2.61 1 FALSE 0.006267 0.1014 0.003 -250 64203 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETQGIEK [R].eTQGIEk.[L] N-Term(TMT6plex); K7(TMT6plex) 20 P30999 Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2 D3Z2H7; P30999-2; E9Q906; Q3TPD1; E9Q905; D3Z2H2; P30999; E9Q8Z9; G3X9V2; E9Q903; E9Q986; E9Q8Z8; E9Q901; E9Q8Z6; P30999-3; E9Q904; E9Q8Z5; E9Q8Z4; D3Z7H6; E9Q907 Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Isoform 2 of Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Isoform 3 of Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1 0 2 2 0.2551 0 1 1 1 631.87183 1262.73638 1262.73564 0.58 0.00037 0/0 0 0 9623400 HCD 30 MS2 53.73045 1194.1 110 53.8101 14931 14931 14923 QEplus033719.raw F4 1457.9 949.3 1264 897.5 1447.5 1148.4 447 2.43 1 FALSE 0.001778 0.03076 0.213 -250 64219 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APFHQLR [K].aPFHQLR.[I] N-Term(TMT6plex) 5 Q91ZW3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Mus musculus OX=10090 GN=Smarca5 PE=1 SV=1 Q6PGB8; Q3U0F8; Q91ZW3; Q05DE7; Q6PGB8-2 Probable global transcription activator SNF2L1 OS=Mus musculus OX=10090 GN=Smarca1 PE=1 SV=1; SANT domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Smarca5 PE=2 SV=1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Mus musculus OX=10090 GN=Smarca5 PE=1 SV=1; Smarca1 protein (Fragment) OS=Mus musculus OX=10090 GN=Smarca1 PE=2 SV=1; Isoform 2 of Probable global transcription activator SNF2L1 OS=Mus musculus OX=10090 GN=Smarca1 0 3 3 0.6258 0 1 1 1 366.55286 1097.64402 1097.64173 2.08 0.00076 0/0 0 0 6731634 HCD 30 MS2 30.87737 288.5 110 53.8151 14933 14933 14923 QEplus033719.raw F4 268.6 246.1 305.7 228.4 385.6 296.7 118 3.1 1 FALSE 5.44E-05 0.002012 0.598 -250 64238 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSAPEVK [K].tSAPEVk.[G] N-Term(TMT6plex); K7(TMT6plex) 3 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 Q6UL10; E9Q616; Q61484 AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; Desmoyokin (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1 0 2 2 0.5567 0 1 1 1 595.36316 1189.71904 1189.71926 -0.18 -0.00011 0/0 0 0 87145608 HCD 30 MS2 29.36325 734.7 10.9 53.8271 14937 14937 14934 QEplus033719.raw F4 742.4 753.8 768.1 590.6 871.9 681.3 626 2.82 1 FALSE 0.002049 0.03584 0.19 -250 64247 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCVVGTK [K].gcVVGTk.[K] N-Term(TMT6plex); C2(Carbamidomethyl); K7(TMT6plex) 6 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB15; Q99N25; Q3U9L3; Q3T9U9; P27659 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Ribosomal protein L3 (Fragment) OS=Mus musculus OX=10090 GN=Rp13 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3 0 2 2 0.1628 0 1 1 1 589.85077 1178.69426 1178.69675 -2.11 -0.00124 0/0 0 0 32967856 HCD 30 MS2 41.32046 962.1 23.961 53.8294 14938 14938 14934 QEplus033719.raw F4 1060.8 822.1 933.1 718.5 1449.9 788.3 319 2.15 1 FALSE 0.00116 0.0156 0.325 -250 64256 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNSLGETAQR [K].vNSLGETAQR.[L] N-Term(TMT6plex) 9 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; B2RXX6; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.5224 0 1 1 1 652.36163 1303.71599 1303.71674 -0.58 -0.00038 0/0 0 0 8596358 HCD 30 MS2 8.442056 590.1 110 53.8319 14939 14939 14934 QEplus033719.raw F4 692.9 429.5 628.5 559.8 605.7 624 369 3.35 2 FALSE 1.14E-05 5.67E-07 1.284 -250 64266 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HMGIGK [R].hMGIGk.[R] N-Term(TMT6plex); K6(TMT6plex) 2 Q5I0T8 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 Q5I0T8; A2A547 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1; Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 0 3 3 0.6756 0 1 1 1 367.56052 1100.667 1100.66506 1.76 0.00065 0/0 0 0 5871340 HCD 30 MS2 51.1201 516.2 110 53.8344 14940 14940 14934 QEplus033719.raw F4 540.9 351.7 538.5 521.4 598.4 546.3 288 2.62 1 FALSE 0.0006216 0.00918 0.418 -250 64269 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTGLGTTR [K].vTGLGTTR.[E] N-Term(TMT6plex) 4 F8WIE5 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Hectd1 PE=1 SV=1 Q69ZR2; Q3TEQ5; F8WIE5; Q3UQY6 E3 ubiquitin-protein ligase HECTD1 OS=Mus musculus OX=10090 GN=Hectd1 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hectd1 PE=2 SV=1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Hectd1 PE=1 SV=1; MIB/HERC2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hectd1 PE=2 SV=1 0 2 2 0.2837 0 1 1 1 517.31519 1033.62309 1033.62032 2.68 0.00138 0/0 0 0 4568378.5 HCD 30 MS2 19.89834 778.3 110 53.8369 14941 14941 14934 QEplus033719.raw F4 1051.4 586.7 828.8 580.2 817.6 805 119 1.41 1 FALSE 0.007947 0.1325 -0.064 -250 64279 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVVAVGAGR [R].aVVAVGAGR.[E] N-Term(TMT6plex) 2 Q8BZ20 Protein mono-ADP-ribosyltransferase PARP12 OS=Mus musculus OX=10090 GN=Parp12 PE=1 SV=3 Q8BZ20; Q3U0S1 Protein mono-ADP-ribosyltransferase PARP12 OS=Mus musculus OX=10090 GN=Parp12 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Parp12 PE=2 SV=1 0 2 2 0.1515 0 1 1 1 514.8269 1028.64653 1028.64139 4.99 0.00257 0/0 0 0 3947912 HCD 30 MS2 40.92466 729.7 110 53.8394 14942 14942 14934 QEplus033719.raw F4 906.8 590.2 752.5 602.8 832.5 693.2 154 1.65 1 FALSE 0.001351 0.01919 0.288 -250 64298 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYQEELSR [K].aYQEELSR.[E] N-Term(TMT6plex) 6 Q99KW3 TRIO and F-actin-binding protein OS=Mus musculus OX=10090 GN=Triobp PE=1 SV=3 Q99KW3-1; A0A2U3TZ82; Q99KW3-2; Q99KW3; Q99KW3-4; Q3U2M9 Isoform 1 of TRIO and F-actin-binding protein OS=Mus musculus OX=10090 GN=Triobp; TRIO and F-actin-binding protein OS=Mus musculus OX=10090 GN=Triobp PE=1 SV=1; Isoform 2 of TRIO and F-actin-binding protein OS=Mus musculus OX=10090 GN=Triobp; TRIO and F-actin-binding protein OS=Mus musculus OX=10090 GN=Triobp PE=1 SV=3; Isoform 4 of TRIO and F-actin-binding protein OS=Mus musculus OX=10090 GN=Triobp; PH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Triobp PE=2 SV=1 0 2 2 0.6132 0 1 1 1 612.82574 1224.64421 1224.64218 1.66 0.00102 0/0 0 0 4435260.5 HCD 30 MS2 48.35922 464.1 110 53.8515 14946 14946 14945 QEplus033719.raw F4 430.1 508.7 495.6 325.8 589.6 435 200 2.87 1 FALSE 1.14E-05 0.0002378 0.785 -250 64307 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVSMDDHK [K].eVSMDDHk.[L] N-Term(TMT6plex); K8(TMT6plex) 2 Q8VDN2 Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1 Q3TXF9; Q8VDN2 Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1 0 2 2 0.0679 0 1 1 1 709.8728 1418.73833 1418.73499 2.36 0.00167 0/0 0 0 4776288.5 HCD 30 MS2 33.03951 283.3 110 53.854 14947 14947 14945 QEplus033719.raw F4 323.4 180.5 278.4 340 235.4 342.1 245 2.65 1 FALSE 1.14E-05 0.0001699 0.813 -250 64320 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQCCCDLGR [K].mQcccDLGR.[C] N-Term(TMT6plex); C3(Carbamidomethyl); C4(Carbamidomethyl); C5(Carbamidomethyl) 3 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q60784 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Fibrillin-1 (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1 0 2 2 0.8982 0 1 1 1 714.80908 1428.61089 1428.60536 3.87 0.00276 0/0 0 0 4520568 HCD 30 MS2 0 228.7 110 53.859 14949 14949 14945 QEplus033719.raw F4 229.4 159.7 261.8 273.4 164 283.8 4 2.85 1 FALSE 1.14E-05 0.0008149 0.68 -250 64322 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHSGMDGLK [K].gHSGMDGLk.[G] N-Term(TMT6plex); K9(TMT6plex) 3 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.5437 0 1 1 1 680.37769 1359.74809 1359.74549 1.91 0.0013 0/0 0 0 4223997 HCD 30 MS2 27.76026 352.2 110 53.8615 14950 14950 14945 QEplus033719.raw F4 351.2 318 384.5 297.3 415.8 346.6 320 2.63 1 FALSE 1.14E-05 0.0003274 0.758 -250 64328 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QETQGLQK [K].qETQGLQk.[E] N-Term(TMT6plex); K8(TMT6plex) 4 E9Q2X6 Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1 Q3UR81; E9Q2X6; Q8CG47; Q6P7V9 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Smc4 PE=2 SV=1; Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1; Structural maintenance of chromosomes protein 4 OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1; Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=2 SV=1 0 2 2 0.251 0 1 1 1 695.40851 1389.80974 1389.8102 -0.33 -0.00023 0/0 0 0 2887792.5 HCD 30 MS2 26.08462 362.5 110 53.864 14951 14951 14945 QEplus033719.raw F4 333.5 393.6 285 237.7 649.6 275.8 538 2.59 1 FALSE 1.14E-05 0.0009337 0.668 -250 64337 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DKQPYEQK [K].dkQPYEQk.[A] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 4 Q9CT19 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb2 PE=2 SV=3 Q9CT19; P30681; Q3UAZ7; Q3U566 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb2 PE=2 SV=3; High mobility group protein B2 OS=Mus musculus OX=10090 GN=Hmgb2 PE=1 SV=3; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hmgb2 PE=2 SV=1 1 3 3 0.5892 0 1 1 1 575.00549 1723.00193 1722.99935 1.5 0.00086 0/0 0 0 39581720 HCD 30 MS2 38.97631 1179.6 39.238 53.8663 14952 14952 14945 QEplus033719.raw F4 1251.7 1409.7 1085.2 671.2 1890.4 769.4 441 2.97 1 FALSE 1.14E-05 4.55E-05 0.922 -250 64380 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALSTGEK [R].aLSTGEk.[G] N-Term(TMT6plex); K7(TMT6plex) 5 Q3UAJ1 Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1 Q3TE63; Q3UAJ1; Q5SVY2; Q9CZK9; A0A1L1SST0 Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1 0 2 2 0.2481 0 1 1 1 582.35577 1163.70427 1163.70361 0.57 0.00033 0/0 0 0 144677200 HCD 30 MS2 9.55295 888.6 8.946 53.8858 14959 14959 14956 QEplus033719.raw F4 1447.8 721.9 970.3 711.2 778.3 701.9 278 2.66 1 FALSE 0.00116 0.01555 0.326 -250 64390 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRYELAR [K].vRYELAR.[G] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 1 3 3 0.4512 0 1 1 1 379.22974 1135.67466 1135.67851 -3.39 -0.00128 0/0 0 0 13222961 HCD 30 MS2 42.99233 575.6 66.793 53.8903 14961 14961 14956 QEplus033719.raw F4 550.9 447.8 689.3 496 535.8 733.9 309 2.97 2 FALSE 0.002071 0.03835 0.181 -250 64423 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KSNDTSQTPPGETVPR [K].kSNDTSQTPPGETVPR.[A] N-Term(TMT6plex); K1(TMT6plex) 14 Q8CE80 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1 Q8CE04; P51125-4; P51125-7; A0A338P6J9; Q921U7; P51125-6; Q8CB83; Q8C281; Q8CE80; Q3TTN2; P51125; A0A1Y7VJN8; P51125-3; P51125-2 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 4 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Isoform 7 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 6 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=2 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=2 SV=1; Calpastatin OS=Mus musculus OX=10090 GN=Cast PE=1 SV=2; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 3 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Isoform 2 of Calpastatin OS=Mus musculus OX=10090 GN=Cast 1 3 3 0.75 0 1 1 1 724.72668 2172.1655 2172.16608 -0.27 -0.00019 0/0 0 0 3071380.75 HCD 30 MS2 0 164.7 110 53.9028 14966 14966 14956 QEplus033719.raw F4 176.3 157.1 182 128.6 182.5 161.7 412 6.08 1 FALSE 1.14E-05 6.97E-16 2.977 -250 64431 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDEELNK [R].nDEELNk.[L] N-Term(TMT6plex); K7(TMT6plex) 14 Q149V4; Q8BFU2; P27661 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1;Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3;Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 Q149V4; Q8BFU2; Q64522; C0HKE5; Q8CGP5; A0AUV1; Q8CGP4; Q8R1M2; P27661; A0A0N4SV66; Q64426; Q8CGP7; Q8CGP6; Q6GSS7 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1; Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3; Histone H2A type 2-B OS=Mus musculus OX=10090 GN=H2ac21 PE=1 SV=3; Histone H2A type 1-G OS=Mus musculus OX=10090 GN=H2ac11 PE=1 SV=1; Histone H2A type 1-F OS=Mus musculus OX=10090 GN=Hist1h2af PE=1 SV=3; Histone H2A (Fragment) OS=Mus musculus OX=10090 GN=H2ac12 PE=2 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2ac1 PE=1 SV=1; Histone H2A.J OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2; Histone H2A OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A (Fragment) OS=Mus musculus domesticus OX=10092 GN=H2A PE=2 SV=1; Histone H2A type 1-K OS=Mus musculus OX=10090 GN=H2ac15 PE=1 SV=3; Histone H2A type 1-H OS=Mus musculus OX=10090 GN=H2ac12 PE=1 SV=3; Histone H2A type 2-A OS=Mus musculus OX=10090 GN=Hist2h2aa1 PE=1 SV=3 0 2 2 0.4488 0 1 1 1 660.36414 1319.72099 1319.72072 0.21 0.00014 0/0 0 0 15436803 HCD 30 MS2 6.649275 962.5 110 53.9102 14968 14968 14967 QEplus033719.raw F4 991.8 985.3 923.5 663.7 1502 708.7 365 3.03 3 FALSE 0.0003496 0.006632 0.465 -250 64445 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAPAPPK [K-].eAPAPPk.[A] N-Term(TMT6plex); K7(TMT6plex) 3 Q4V9X9 Rpl23a protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl23a PE=2 SV=1 Q4V9X9; Q91YK6; P62751 Rpl23a protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl23a PE=2 SV=1; Rpl23a protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl23a PE=2 SV=1; 60S ribosomal protein L23a OS=Mus musculus OX=10090 GN=Rpl23a PE=1 SV=1 0 3 3 0.316 0 1 1 1 389.90961 1167.71427 1167.71378 0.42 0.00016 0/0 0 0 59046716 HCD 30 MS2 56.47503 498.4 14.38 53.9172 14971 14971 14967 QEplus033719.raw F4 518.5 348.5 504.8 460.4 558.5 599.8 159 2.31 1 FALSE 0.002628 0.05182 0.137 -250 64483 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EESAASGGAAYSK [K].eESAASGGAAYSk.[R] N-Term(TMT6plex); K13(TMT6plex) 4 Q569Z6 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1 Q569Z6; Q8BZN7; Q8R353; Q8BV76 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Thrap3 protein OS=Mus musculus OX=10090 GN=Thrap3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Thrap3 PE=2 SV=1 0 2 2 0.7059 0 1 1 1 843.44232 1685.87737 1685.87465 1.61 0.00136 0/0 0 0 3988756.75 HCD 30 MS2 0 270.9 110 53.9394 14979 14979 14978 QEplus033719.raw F4 290.4 280.5 284.6 191.4 322.2 256.4 276 5.27 1 FALSE 1.14E-05 8.09E-15 2.774 -250 64490 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGNCTDCIK [K].dGNcTDcIk.[D] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl); K9(TMT6plex) 2 Q9CYG7 Mitochondrial import receptor subunit TOM34 OS=Mus musculus OX=10090 GN=Tomm34 PE=1 SV=1 Q9CYG7; Q9CYG7-2 Mitochondrial import receptor subunit TOM34 OS=Mus musculus OX=10090 GN=Tomm34 PE=1 SV=1; Isoform 2 of Mitochondrial import receptor subunit TOM34 OS=Mus musculus OX=10090 GN=Tomm34 0 2 2 0.6801 0 1 1 1 770.87567 1540.74407 1540.74998 -3.84 -0.00296 0/0 0 0 2401559.25 HCD 30 MS2 53.1647 351.9 110 53.9419 14980 14980 14978 QEplus033719.raw F4 369.5 285.2 364 353 330 409.5 101 3.22 1 FALSE 1.14E-05 9.23E-06 1.054 -250 64494 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGDGTITTK [K].dGDGTITTk.[E] N-Term(TMT6plex); K9(TMT6plex) 2 P0DP27 Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1 P0DP27; Q3UKW2 Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=1 SV=1 0 2 2 0.644 0 1 1 1 683.38287 1365.75847 1365.76258 -3.01 -0.00206 0/0 0 0 22433972 HCD 30 MS2 8.147956 882.2 73.703 53.9442 14981 14981 14978 QEplus033719.raw F4 935.5 772.3 1034.4 773.9 950.2 826.8 340 3.09 1 FALSE 1.14E-05 2.28E-05 0.979 -250 64502 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQHYAK [R].lQHYAk.[I] N-Term(TMT6plex); K6(TMT6plex) 4 Q61699 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2 E9Q0U7; Q61699; Q8C6H1; Q61699-2 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=1; Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsph1 PE=2 SV=1; Isoform HSP105-beta of Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 0 3 3 0.4192 0 1 1 2 406.58472 1217.7396 1217.74066 -0.88 -0.00036 0/0 0 0 9318241 HCD 30 MS2 41.96741 766.6 110 53.9467 14982 14982 14978 QEplus033719.raw F4 820.1 544.1 859.3 796.8 768 811.6 528 2.91 1 FALSE 0.001615 0.02614 0.237 -250 64530 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LENNDNKPVTNSR [R].lENNDNkPVTNSR.[D] N-Term(TMT6plex); K7(TMT6plex) 10 P59326; Q8BYK6 YTH domain-containing family protein 1 OS=Mus musculus OX=10090 GN=Ythdf1 PE=1 SV=1;YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3 PE=1 SV=2 Q3TH60; Q8BYK6-2; P59326; Q8BYK6-3; Q8R5D2; Q8BYK6; Q7TN20; Q3U8D6; Q8BVC6; A2AWN8 YTH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ythdf1 PE=2 SV=1; Isoform 2 of YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3; YTH domain-containing family protein 1 OS=Mus musculus OX=10090 GN=Ythdf1 PE=1 SV=1; Isoform 3 of YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3; Ythdf3 protein (Fragment) OS=Mus musculus OX=10090 GN=Ythdf3 PE=2 SV=1; YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3 PE=1 SV=2; Ythdf3 protein (Fragment) OS=Mus musculus OX=10090 GN=Ythdf3 PE=2 SV=1; YTH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ythdf1 PE=2 SV=1; YTH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ythdf3 PE=2 SV=1; YTH domain-containing family protein 1 OS=Mus musculus OX=10090 GN=Ythdf1 PE=1 SV=1 0 3 3 0.5248 0 1 1 1 653.69281 1959.06388 1959.06597 -1.07 -0.0007 0/0 0 0 8270449 HCD 30 MS2 26.10859 618.4 110 53.9542 14985 14985 14978 QEplus033719.raw F4 651.7 516.5 673 479.8 677.5 711.8 403 3.22 2 FALSE 1.14E-05 2.06E-09 1.747 -250 64540 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DKDPILRR [R].dkDPILRR.[S] N-Term(TMT6plex); K2(TMT6plex) 6 Q3TXS7 26S proteasome non-ATPase regulatory subunit 1 OS=Mus musculus OX=10090 GN=Psmd1 PE=1 SV=1 Q05CG9; Q5HZG6; Q8BU34; Q8CGG2; Q3TXS7; Q8CGI9 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=2; 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 1 OS=Mus musculus OX=10090 GN=Psmd1 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=1 2 4 4 0.4493 0 1 1 1 368.48453 1470.91628 1470.91567 0.42 0.00015 0/0 0 0 7803272 HCD 30 MS2 10.31621 631.6 110 53.9567 14986 14986 14978 QEplus033719.raw F4 672.8 490.1 715 618.2 614.5 679 230 2.27 1 FALSE 0.003182 0.06202 0.109 -250 64547 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEGEIEK [K].gEGEIEk.[L] N-Term(TMT6plex); K7(TMT6plex) 1 Q8BL66 Early endosome antigen 1 OS=Mus musculus OX=10090 GN=Eea1 PE=1 SV=2 Q8BL66 Early endosome antigen 1 OS=Mus musculus OX=10090 GN=Eea1 PE=1 SV=2 0 2 2 0.2846 0 1 1 1 610.35217 1219.69707 1219.69344 2.98 0.00182 0/0 0 0 7363631.5 HCD 30 MS2 17.16074 734.9 110 53.9592 14987 14987 14978 QEplus033719.raw F4 850.7 507.3 706.5 826 755.2 763.7 457 2.46 1 FALSE 0.0002814 0.005783 0.483 -250 64567 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FGVEQDR [K].fGVEQDR.[M] N-Term(TMT6plex) 3 Q60598 Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2 Q8BNA5; Q60598; Q921L6 SH3 domain-containing protein OS=Mus musculus OX=10090 GN=Cttn PE=2 SV=1; Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2; Cttn protein OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=1 0 2 2 0.304 0 1 1 1 540.28796 1079.56865 1079.56829 0.34 0.00018 0/0 0 0 24798644 HCD 30 MS2 19.1546 988.7 56.475 53.9764 14992 14992 14991 QEplus033719.raw F4 1062.1 786.8 1041.1 802.2 1143.5 1096.5 124 2.73 1 FALSE 0.0004888 0.007703 0.445 -250 64575 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVVVDSRPR [R].vVVVDSRPR.[L] N-Term(TMT6plex) 4 Q61749 Translation initiation factor eIF-2B subunit delta OS=Mus musculus OX=10090 GN=Eif2b4 PE=1 SV=2 Q61749-2; F7CPG6; Q61749; D3Z780 Isoform 2 of Translation initiation factor eIF-2B subunit delta OS=Mus musculus OX=10090 GN=Eif2b4; Translation initiation factor eIF-2B subunit delta (Fragment) OS=Mus musculus OX=10090 GN=Eif2b4 PE=1 SV=1; Translation initiation factor eIF-2B subunit delta OS=Mus musculus OX=10090 GN=Eif2b4 PE=1 SV=2; Translation initiation factor eIF-2B subunit delta OS=Mus musculus OX=10090 GN=Eif2b4 PE=1 SV=1 0 3 3 0.6287 0 1 1 1 419.25888 1255.76209 1255.76839 -5.01 -0.0021 0/0 0 0 4837996 HCD 30 MS2 58.68481 470 110 53.9789 14993 14993 14991 QEplus033719.raw F4 565.3 362.6 447.3 395.2 555.6 494.3 257 3.69 1 FALSE 1.14E-05 0.0003199 0.76 -250 64585 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SFDDSGSGYCR [R].sFDDSGSGYcR.[S] N-Term(TMT6plex); C10(Carbamidomethyl) 4 Q3UHT6 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1 Q3UHT6; P19096; Q3TB22; A0A0U1RNJ1 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2; Fatty acid synthase (Fragment) OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=1 0 2 2 0.8333 0 1 1 1 740.32495 1479.64263 1479.63717 3.68 0.00273 0/0 0 0 5088658.5 HCD 30 MS2 47.83261 418.5 110 53.9814 14994 14994 14991 QEplus033719.raw F4 406.2 355.6 452.5 397.7 462.4 436.3 18 3.42 1 FALSE 1.14E-05 1.15E-05 1.036 -250 64598 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGDGTITTK [K].dGDGTITTk.[E] N-Term(TMT6plex); K9(TMT6plex) 2 P0DP27 Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1 P0DP27; Q3UKW2 Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=1 SV=1 0 3 3 0.5593 0 1 1 1 455.92545 1365.76178 1365.76258 -0.58 -0.00027 0/0 0 0 15266169 HCD 30 MS2 41.31171 532.9 78.519 53.9859 14996 14996 14991 QEplus033719.raw F4 556 478.1 560.3 428.4 678.6 496.2 361 2.7 1 FALSE 0.0001603 0.003775 0.534 -250 64608 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSYVGDEAQSKR [KR].dSYVGDEAQSkR.[G] N-Term(TMT6plex); K11(TMT6plex) 42 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; Q8CF71; P63268; Q61274; V9GXQ2; Q3UIJ3; Q3UCF8; Q9QZ83; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Predicted gene 17087 OS=Mus musculus OX=10090 GN=Gm17087 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 1 3 3 0.6848 0 1 1 1 604.98706 1812.94663 1812.94921 -1.43 -0.00086 0/0 0 0 12251684 HCD 30 MS2 6.311898 865.8 110 53.9884 14997 14997 14991 QEplus033719.raw F4 841.6 1003.9 1027.1 815.4 825.9 680.9 310 4.22 4 FALSE 1.14E-05 1.29E-10 1.976 -250 64640 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VREYELR [K].vREYELR.[K] N-Term(TMT6plex) 3 Q8VC94 60S ribosomal protein L11 OS=Mus musculus OX=10090 GN=Rpl11 PE=2 SV=1 Q8VC94; A2BH06; Q9CXW4 60S ribosomal protein L11 OS=Mus musculus OX=10090 GN=Rpl11 PE=2 SV=1; 60S ribosomal protein L11 (Fragment) OS=Mus musculus OX=10090 GN=Rpl11 PE=1 SV=1; 60S ribosomal protein L11 OS=Mus musculus OX=10090 GN=Rpl11 PE=1 SV=4 1 3 3 0.4488 0 1 1 1 398.5665 1193.68494 1193.68399 0.8 0.00032 0/0 0 0 16449315 HCD 30 MS2 13.06707 340.3 44.656 54.0055 15003 15003 15002 QEplus033719.raw F4 315.8 280.7 405.5 310.8 349.5 379.2 408 3.03 1 FALSE 0.0001504 0.003319 0.548 -250 64664 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAAAVGNHVAK [K].dAAAVGNHVAk.[L] N-Term(TMT6plex); K11(TMT6plex) 2 Q3UK27 NEDD8-activating enzyme E1 regulatory subunit OS=Mus musculus OX=10090 GN=Nae1 PE=1 SV=1 Q3UK27; E0CZE0 NEDD8-activating enzyme E1 regulatory subunit OS=Mus musculus OX=10090 GN=Nae1 PE=1 SV=1; NEDD8-activating enzyme E1 regulatory subunit OS=Mus musculus OX=10090 GN=Nae1 PE=1 SV=1 0 3 3 0.7605 0 1 1 1 504.29758 1510.87818 1510.8742 2.63 0.00133 0/0 0 0 16476085 HCD 30 MS2 35.07429 1158.1 68.075 54.0127 15006 15006 15002 QEplus033719.raw F4 1750.4 801 1246.6 952.3 897.4 1300.7 325 3.8 1 FALSE 1.14E-05 9.53E-08 1.431 -250 64686 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMPEQTGEK [R].sMPEQTGEk.[-] N-Term(TMT6plex); K9(TMT6plex) 3 P62889 60S ribosomal protein L30 OS=Mus musculus OX=10090 GN=Rpl30 PE=1 SV=2 Q5PR15; P62889; A0A2I3BQF4 60S ribosomal protein L30 OS=Mus musculus OX=10090 GN=Rpl30 PE=2 SV=1; 60S ribosomal protein L30 OS=Mus musculus OX=10090 GN=Rpl30 PE=1 SV=2; 60S ribosomal protein L30 OS=Mus musculus OX=10090 GN=Rpl30 PE=1 SV=1 0 2 2 0.5865 0 1 1 1 732.8916 1464.77593 1464.77685 -0.63 -0.00046 0/0 0 0 3815474.25 HCD 30 MS2 0 354.9 110 54.025 15011 15011 15002 QEplus033719.raw F4 415.6 326.8 383.2 278 383.4 342.4 320 3.41 1 FALSE 1.14E-05 2.19E-06 1.173 -250 64695 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGEAPDPEDPSRK [R].dGEAPDPEDPSRk.[I] N-Term(TMT6plex); K13(TMT6plex) 1 P24527 Leukotriene A-4 hydrolase OS=Mus musculus OX=10090 GN=Lta4h PE=1 SV=4 P24527 Leukotriene A-4 hydrolase OS=Mus musculus OX=10090 GN=Lta4h PE=1 SV=4 1 3 3 0.7846 0 1 1 1 624.32477 1870.95975 1870.95469 2.7 0.00169 0/0 0 0 3307295.75 HCD 30 MS2 48.17927 492.5 110 54.0275 15012 15012 15002 QEplus033719.raw F4 540.9 453.2 525.6 429.9 532.1 473.4 272 3.25 1 FALSE 1.14E-05 8.30E-07 1.253 -250 64710 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGTSGHPGPIGPPGPR [K].dGTSGHPGPIGPPGPR.[G] N-Term(TMT6plex) 9 Q3TW25; Q7TT32 "Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1;Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BJU6; Q8BKY2; Q3TW25; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 3 3 0.7426 0 1 1 1 576.63873 1727.90165 1727.90265 -0.58 -0.00033 0/0 0 0 4469883.5 HCD 30 MS2 22.62106 624.1 110 54.0373 15015 15015 15013 QEplus033719.raw F4 649.8 617.9 635.6 504.9 778.7 557.7 260 5.05 2 FALSE 1.14E-05 9.94E-09 1.618 -250 64721 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDVGDEGEEEK [K].eDVGDEGEEEk.[E] N-Term(TMT6plex); K11(TMT6plex) 1 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 2 2 0.7595 0 1 1 1 847.41034 1693.8134 1693.81686 -2.04 -0.00173 0/0 0 0 5307913.5 HCD 30 MS2 0 482.9 110 54.0421 15017 15017 15013 QEplus033719.raw F4 509.4 363.4 519 404.4 554.2 547.2 91 4.2 1 FALSE 1.14E-05 3.69E-07 1.32 -250 64727 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLAGQDQEEQK [R].sLAGQDQEEQk.[L] N-Term(TMT6plex); K11(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 3 3 0.5452 0 1 1 1 564.30536 1690.90152 1690.9012 0.19 0.00011 0/0 0 0 11303203 HCD 30 MS2 28.42894 808.9 110 54.0446 15018 15018 15013 QEplus033719.raw F4 1019.1 552.1 876.5 698.9 794.1 912.7 314 3.1 1 FALSE 5.44E-05 0.002057 0.596 -250 64753 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGQPGPVGPAGVR [R].sGQPGPVGPAGVR.[G] N-Term(TMT6plex) 5 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q91VL4; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Col1a2 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.6316 0 1 1 1 704.39935 1407.79143 1407.79058 0.6 0.00043 0/0 0 0 16258703 HCD 30 MS2 0 425.2 110 54.0595 15023 15023 15022 QEplus033719.raw F4 404.5 350 458 423 482 433.5 473 3.61 1 FALSE 1.14E-05 1.06E-11 2.182 -250 64761 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYSTSVTGSR [R].vYSTSVTGSR.[E] N-Term(TMT6plex) 2 Q91VW3 SH3 domain-binding glutamic acid-rich-like protein 3 OS=Mus musculus OX=10090 GN=Sh3bgrl3 PE=1 SV=1 Q91VW3; I7HPY0 SH3 domain-binding glutamic acid-rich-like protein 3 OS=Mus musculus OX=10090 GN=Sh3bgrl3 PE=1 SV=1; SH3 domain-binding glutamic acid-rich-like protein 3 OS=Mus musculus OX=10090 GN=Sh3bgrl3 PE=1 SV=1 0 2 2 0.7143 0 1 1 1 643.35132 1285.69536 1285.69495 0.32 0.00021 0/0 0 0 45295688 HCD 30 MS2 2.359084 558.8 48.28 54.0668 15025 15025 15024 QEplus033719.raw F4 498.2 641.2 624.2 344.9 782.5 461.5 210 3.22 1 FALSE 1.14E-05 1.63E-07 1.387 -250 64770 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSEGLEQK [R].tSEGLEQk.[S] N-Term(TMT6plex); K8(TMT6plex) 22 Q9WV92-2 Isoform 2 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 Q9WV92; A7MCX4; Q9WV92-7; A0A3B2WD96; Q9WV92-4; Q9WV92-5; D0VYV7; Q9WV92-3; A0A286YCY1; B6ZHD1; D0VYV6; Q9WV92-2; V6BQR3; Q9WV92-8; A0A286YD84; Q8BT38; A7YY80; A0A286YDY4; A0A5F8MPR1; Q9WV92-6; A0A5F8MPE1; A0A3B2WBE1 Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Epb4.1l3 protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Isoform 7 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Isoform 4 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Isoform 5 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Erythrocyte protein band 4.1-like 3 isoform C OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Isoform 3 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Band 4.1-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Erythrocyte protein band 4.1-like 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Isoform 2 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; 60kDa 4.1B MEF cell isoform (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Isoform 8 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Band 4.1-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; 4_1_CTD domain-containing protein OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; 130kDa Protein 4.1B MEF cell isoform OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Band 4.1-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Isoform 6 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Band 4.1-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1 0 2 2 0.4209 0 1 1 1 675.3877 1349.76811 1349.76767 0.33 0.00022 0/0 0 0 16063173 HCD 30 MS2 0 806.5 110 54.0693 15026 15026 15024 QEplus033719.raw F4 839.2 825.6 877.2 546.5 1066.3 684.4 440 2.97 1 FALSE 5.44E-05 0.002127 0.593 -250 64778 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALSTGEK [R].aLSTGEk.[G] N-Term(TMT6plex); K7(TMT6plex) 5 Q3UAJ1 Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1 Q3TE63; Q3UAJ1; Q5SVY2; Q9CZK9; A0A1L1SST0 Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1 0 3 3 0.116 0 1 1 1 388.57275 1163.70371 1163.70361 0.09 0.00003 0/0 0 0 22354938 HCD 30 MS2 23.78703 496.7 52.693 54.0716 15027 15027 15024 QEplus033719.raw F4 630 406.8 566 393.1 520.8 463.4 278 2.5 1 FALSE 0.003101 0.0603 0.113 -250 64793 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKKPAAAAGAK [K].akkPAAAAGAk.[K] N-Term(TMT6plex); K2(TMT6plex); K3(TMT6plex); K11(TMT6plex) 3 P43274 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2 P43274; Q3U292; P43277 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2; H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f3 PE=2 SV=1; Histone H1.3 OS=Mus musculus OX=10090 GN=H1-3 PE=1 SV=2 1 4 4 0.529 0 1 1 1 475.81897 1900.25405 1900.25137 1.41 0.00067 0/0 0 0 3589620.25 HCD 30 MS2 17.78613 769.7 110 54.0765 15029 15029 15024 QEplus033719.raw F4 1035.4 713.7 843.5 559.4 658.2 807.7 55 2.59 1 FALSE 0.003817 0.07227 0.082 -250 64814 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MKLEQER [R].mkLEQER.[Q] N-Term(TMT6plex); K2(TMT6plex) 1 Q3UL36 Arginine and glutamate-rich protein 1 OS=Mus musculus OX=10090 GN=Arglu1 PE=1 SV=2 Q3UL36 Arginine and glutamate-rich protein 1 OS=Mus musculus OX=10090 GN=Arglu1 PE=1 SV=2 1 3 3 0.097 0 1 1 1 464.60718 1391.80698 1391.80809 -0.8 -0.00037 0/0 0 0 8941873 HCD 30 MS2 58.19265 734 110 54.0838 15032 15032 15024 QEplus033719.raw F4 662.2 774.3 870.1 546.5 832.4 718.4 500 1.34 1 FALSE 0.003658 0.06982 0.088 -250 64822 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSIAPSQR [R].vSIAPSQR.[Q] N-Term(TMT6plex) 2 Q922U1 U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=1 SV=1 Q922U1; Q3UT19 U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=1 SV=1; Pre-mRNA-splicing factor 3 OS=Mus musculus OX=10090 GN=Prpf3 PE=2 SV=1 0 2 2 0.3169 0 1 1 1 543.82788 1086.64849 1086.64687 1.48 0.00081 0/0 0 0 6147136 HCD 30 MS2 39.12238 762.4 110 54.0863 15033 15033 15024 QEplus033719.raw F4 763.6 636.1 822.7 717.4 831.3 803.5 307 1.83 1 FALSE 0.001335 0.0183 0.297 -250 64840 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTGASGSFK [K].gTGASGSFk.[L] N-Term(TMT6plex); K9(TMT6plex) 9 P43274; Q1WWK3; P15864 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2;Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1;Histone H1.2 OS=Mus musculus OX=10090 GN=H1-2 PE=1 SV=2 P43274; Q1WWK3; I7HFT9; P43276; Q3UXH2; Q3U292; P15864; Q07133; P43277 "Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2; Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1; H1.6 linker histone, cluster member OS=Mus musculus OX=10090 GN=H1f6 PE=1 SV=1; Histone H1.5 OS=Mus musculus OX=10090 GN=H1-5 PE=1 SV=2; H15 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=H1f2 PE=2 SV=1; H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f3 PE=2 SV=1; Histone H1.2 OS=Mus musculus OX=10090 GN=H1-2 PE=1 SV=2; Histone H1t OS=Mus musculus OX=10090 GN=H1-6 PE=1 SV=4; Histone H1.3 OS=Mus musculus OX=10090 GN=H1-3 PE=1 SV=2" 0 2 2 0.5 0 1 1 1 635.36414 1269.72099 1269.72032 0.53 0.00034 0/0 0 0 481464544 HCD 30 MS2 5.037694 909.7 3.647 54.0962 15036 15036 15035 QEplus033719.raw F4 726.6 975.9 961.8 591.8 1576.9 624.9 314 3.24 3 FALSE 1.14E-05 5.11E-05 0.913 -250 64868 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGACGFNSR [R].vGAcGFNSR.[I] N-Term(TMT6plex); C4(Carbamidomethyl) 2 Q91VE0 Long-chain fatty acid transport protein 4 OS=Mus musculus OX=10090 GN=Slc27a4 PE=1 SV=1 Q9CV67; Q91VE0 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Slc27a4 PE=2 SV=1; Long-chain fatty acid transport protein 4 OS=Mus musculus OX=10090 GN=Slc27a4 PE=1 SV=1 0 2 2 0.4074 0 1 1 1 598.80597 1196.60466 1196.60436 0.25 0.00015 0/0 0 0 3045522 HCD 30 MS2 50.39922 503.5 110 54.1082 15041 15041 15035 QEplus033719.raw F4 497.1 414.6 525.6 443.1 586.5 554 139 2.16 1 FALSE 0.0001813 0.003969 0.528 -250 64873 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGTSGHPGPIGPPGPR [K].dGTSGHPGPIGPPGPR.[G] N-Term(TMT6plex) 9 Q3TW25; Q7TT32 "Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1;Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BJU6; Q8BKY2; Q3TW25; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 3 3 0.787 0 1 1 1 576.63977 1727.90476 1727.90265 1.22 0.0007 0/0 0 0 10406763 HCD 30 MS2 8.354171 509.1 110 54.1107 15042 15042 15035 QEplus033719.raw F4 527.4 545.4 501.8 335.9 725.7 418.3 262 5.4 2 FALSE 1.14E-05 8.53E-12 2.2 -250 64878 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTQFWR [K].rTQFWR.[Y] N-Term(TMT6plex) 1 P51881 ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3 P51881 ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3 1 3 3 0.3908 0 1 1 1 374.88367 1122.63645 1122.63698 -0.47 -0.00018 0/0 0 0 10093670 HCD 30 MS2 38.29872 402.8 110 54.1132 15043 15043 15035 QEplus033719.raw F4 405.7 290.5 426.8 322.2 440.9 530.5 189 2.61 1 FALSE 0.002998 0.05846 0.118 -250 64891 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKEEQATCPNCR [R].lkEEQATcPNcR.[C] N-Term(TMT6plex); K2(TMT6plex); C8(Carbamidomethyl); C11(Carbamidomethyl) 5 H3BIV6 Cysteine and histidine-rich protein 1 OS=Mus musculus OX=10090 GN=Cyhr1 PE=1 SV=1 Q9QXA1-2; H3BIV6; Q9QXA1-3; Q9QXA1; A0A2R8VI70 Isoform 2 of Cysteine and histidine-rich protein 1 OS=Mus musculus OX=10090 GN=Cyhr1; Cysteine and histidine-rich protein 1 OS=Mus musculus OX=10090 GN=Cyhr1 PE=1 SV=1; Isoform 3 of Cysteine and histidine-rich protein 1 OS=Mus musculus OX=10090 GN=Cyhr1; Cysteine and histidine-rich protein 1 OS=Mus musculus OX=10090 GN=Cyhr1 PE=1 SV=1; Cysteine and histidine-rich protein 1 OS=Mus musculus OX=10090 GN=Cyhr1 PE=1 SV=1 1 3 3 0.7653 0 1 1 1 655.34259 1964.01322 1964.00939 1.95 0.00128 0/0 0 0 2646221.5 HCD 30 MS2 0 231.8 110 54.1182 15045 15045 15035 QEplus033719.raw F4 222.5 225.6 284.8 206.4 224.2 227.6 298 4.26 1 FALSE 1.14E-05 8.40E-10 1.821 -250 64900 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQIALDR [K].qQIALDR.[A] N-Term(TMT6plex) 3 A0A0R4J078 UBX domain-containing protein 4 OS=Mus musculus OX=10090 GN=Ubxn4 PE=1 SV=1 A0A0R4J078; Q8VCH8; Q3ULE5 UBX domain-containing protein 4 OS=Mus musculus OX=10090 GN=Ubxn4 PE=1 SV=1; UBX domain-containing protein 4 OS=Mus musculus OX=10090 GN=Ubxn4 PE=1 SV=1; UBX domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ubxn4 PE=2 SV=1 0 2 2 0.1776 0 1 1 1 536.82025 1072.63323 1072.63122 1.87 0.001 0/0 0 0 12949803 HCD 30 MS2 17.752 818.1 110 54.1305 15049 15049 15046 QEplus033719.raw F4 909.4 659.9 877.4 686.2 886.9 888.9 350 2.14 1 FALSE 0.0002719 0.005528 0.489 -250 64909 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEAAVR [K].lEAAVR.[I] N-Term(TMT6plex) 2 Q6P5E4 UDP-glucose:glycoprotein glucosyltransferase 1 OS=Mus musculus OX=10090 GN=Uggt1 PE=1 SV=4 Q6P5E4; B0LAE5 UDP-glucose:glycoprotein glucosyltransferase 1 OS=Mus musculus OX=10090 GN=Uggt1 PE=1 SV=4; UDP-glucose ceramide glucosyltransferase-like 1 protein (Fragment) OS=Mus musculus OX=10090 GN=Uggt1 PE=2 SV=1 0 2 2 0.125 0 1 1 2 444.27921 887.55113 887.55118 -0.05 -0.00002 0/0 0 0 9843467 HCD 30 MS2 52.17593 947.6 84.209 54.1327 15050 15050 15046 QEplus033719.raw F4 970.2 665 972.3 750.5 1045.2 1282.2 164 2.24 1 FALSE 0.002396 0.04739 0.15 -250 64917 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPTGEMK [R].tPTGEMk.[I] N-Term(TMT6plex); K7(TMT6plex) 3 P09541 Myosin light chain 4 OS=Mus musculus OX=10090 GN=Myl4 PE=1 SV=3 Q9CZ19; A2A6Q8; P09541 Myosin light chain 4 OS=Mus musculus OX=10090 GN=Myl4 PE=1 SV=1; Myosin light chain 4 (Fragment) OS=Mus musculus OX=10090 GN=Myl4 PE=1 SV=8; Myosin light chain 4 OS=Mus musculus OX=10090 GN=Myl4 PE=1 SV=3 0 2 2 0.41 0 1 1 1 611.34985 1221.69243 1221.69133 0.9 0.00055 0/0 0 0 5417991 HCD 30 MS2 0 805.9 110 54.1352 15051 15051 15046 QEplus033719.raw F4 1179.5 292.4 725.8 1052.7 603.7 981.4 397 2 1 FALSE 0.003134 0.06111 0.111 -250 64924 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNQDDSLDSK [K].tNQDDSLDSk.[S] N-Term(TMT6plex); K10(TMT6plex) 6 J3QJX3 Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=1 J3QJX3; Q5DTL8; Q9Z2G6; Q9DAT4; Q3TT70; Q6GTY4 Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=1; MKIAA4137 protein (Fragment) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1; Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1; Fibronectin type-II domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1; Sel-1 suppressor of lin-12-like (C. elegans) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1 0 2 2 0.6029 0 1 1 1 790.9126 1580.81792 1580.8168 0.71 0.00056 0/0 0 0 3177776.75 HCD 30 MS2 0 255.1 110 54.1378 15052 15052 15046 QEplus033719.raw F4 253.3 187.9 248.9 240.7 291.7 308 251 3.5 1 FALSE 1.14E-05 1.66E-08 1.576 -250 64940 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALVQGRPVPR [K].aLVQGRPVPR.[V] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.465 0 1 1 1 441.28052 1321.827 1321.82657 0.33 0.00014 0/0 0 0 12129666 HCD 30 MS2 67.67606 814.2 110 54.1425 15054 15054 15046 QEplus033719.raw F4 878.2 561.3 747.1 853 971 874.7 154 2.43 2 FALSE 0.001778 0.03048 0.214 -250 64955 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IMEHAGK [K].iMEHAGk.[N] N-Term(TMT6plex); K7(TMT6plex) 1 Q6P4T2 U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Mus musculus OX=10090 GN=Snrnp200 PE=1 SV=1 Q6P4T2 U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Mus musculus OX=10090 GN=Snrnp200 PE=1 SV=1 0 3 3 0.3918 0 1 1 1 415.24677 1243.72574 1243.7233 1.96 0.00081 0/0 0 0 6689289 HCD 30 MS2 68.03757 744.4 110 54.1475 15056 15056 15046 QEplus033719.raw F4 1315 470.1 644.2 585.2 824.5 627.2 345 2.68 1 FALSE 0.0002909 0.005992 0.479 -250 64963 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSYVGDEAQSKR [KR].dSYVGDEAQSkR.[G] N-Term(TMT6plex); K11(TMT6plex) 42 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; Q8CF71; P63268; Q61274; V9GXQ2; Q3UIJ3; Q3UCF8; Q9QZ83; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Predicted gene 17087 OS=Mus musculus OX=10090 GN=Gm17087 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 1 2 2 0.563 0 1 1 1 906.9776 1812.94792 1812.94921 -0.71 -0.00064 0/0 0 0 4460216 HCD 30 MS2 0 190.8 110 54.1573 15059 15059 15057 QEplus033719.raw F4 161 215.6 237.9 185.6 180.7 163.8 313 3.41 4 FALSE 1.14E-05 3.15E-10 1.902 -250 64973 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQMAATEQDK [R].dQMAATEQDk.[T] N-Term(TMT6plex); K10(TMT6plex) 1 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 0 3 3 0.5874 0 1 1 1 532.27686 1594.81601 1594.81469 0.83 0.00044 0/0 0 0 7146939 HCD 30 MS2 46.37309 776.9 110 54.1598 15060 15060 15057 QEplus033719.raw F4 928.4 378.6 763.9 1053.9 444.6 1091.8 209 3.49 1 FALSE 1.14E-05 2.19E-05 0.983 -250 65007 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KDEGTGTLRK [K].kDEGTGTLRk.[D] N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex) 5 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q8C9Z8; Q80TM2; A2AIM2; Q3UHS6; P26039 FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Talin-1 (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 2 4 4 0.358 0 1 1 1 448.77924 1792.09511 1792.08956 3.1 0.00139 0/0 0 0 4027346.5 HCD 30 MS2 38.24941 699 110 54.1746 15066 15066 15057 QEplus033719.raw F4 1087.7 543.6 636.3 487 837.3 602.3 343 1.76 1 FALSE 0.007421 0.12 -0.042 -250 65015 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NKESKDPADETEAD [K].nkESkDPADETEAD.[-] N-Term(TMT6plex); K2(TMT6plex); K5(TMT6plex) 6 Q91XT3 Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1 Q9CXQ8; Q91XT3; Q9DCP3; Q9CYU5; Q8C2H3; P54227 Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=2 2 3 3 0.5075 0 1 1 1 746.05554 2236.15207 2236.1548 -1.22 -0.00091 0/0 0 0 5993463 HCD 30 MS2 36.23807 139.7 110 54.1771 15067 15067 15057 QEplus033719.raw F4 129 242.1 130.8 94.1 140.9 101.3 347 1.99 1 FALSE 0.002071 0.03815 0.181 -250 65018 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQMAATEQDK [R].dQMAATEQDk.[T] N-Term(TMT6plex); K10(TMT6plex) 1 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 0 2 2 0.617 0 1 1 1 797.91113 1594.81499 1594.81469 0.19 0.00015 0/0 0 0 7627799 HCD 30 MS2 0 416.3 110 54.1845 15069 15069 15068 QEplus033719.raw F4 475.1 55.5 264.6 955.9 56.4 690.2 203 4.23 1 FALSE 1.14E-05 3.01E-08 1.526 -250 65025 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGYAGEDCPK [R].aGYAGEDcPk.[AVL] N-Term(TMT6plex); C8(Carbamidomethyl); K10(TMT6plex) 6 Q505L1 Actl6a protein OS=Mus musculus OX=10090 GN=Actl6a PE=1 SV=1 F8WI57; Q505L1; A0A0A6YWG8; A0A0A6YW15; Q3TF62; Q99MR0 Actin-like protein 6B OS=Mus musculus OX=10090 GN=Actl6b PE=1 SV=1; Actl6a protein OS=Mus musculus OX=10090 GN=Actl6a PE=1 SV=1; Actin-like protein 6A (Fragment) OS=Mus musculus OX=10090 GN=Actl6a PE=1 SV=1; Actin-like protein 6A OS=Mus musculus OX=10090 GN=Actl6a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actl6a PE=2 SV=1; Actin-like protein 6B OS=Mus musculus OX=10090 GN=Actl6b PE=1 SV=1 0 2 2 0.7098 0 1 1 1 763.39063 1525.77397 1525.7721 1.23 0.00094 0/0 0 0 6718507.5 HCD 30 MS2 12.83934 391.5 110 54.187 15070 15070 15068 QEplus033719.raw F4 386.5 368.5 426.7 283.2 466.1 418.2 155 3.48 1 FALSE 1.14E-05 5.34E-08 1.479 -250 65043 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAPAATVCPEHCDPTR [R].sAPAATVcPEHcDPTR.[C] N-Term(TMT6plex); C8(Carbamidomethyl); C12(Carbamidomethyl) 1 Q9R118 Serine protease HTRA1 OS=Mus musculus OX=10090 GN=Htra1 PE=1 SV=2 Q9R118 Serine protease HTRA1 OS=Mus musculus OX=10090 GN=Htra1 PE=1 SV=2 0 3 3 0.8457 0 1 1 1 666.65137 1997.93955 1997.93706 1.25 0.00083 0/0 0 0 11165640 HCD 30 MS2 42.87562 329.8 110 54.1918 15072 15072 15068 QEplus033719.raw F4 345.1 255.8 351.9 346.1 318 362 76 5.38 1 FALSE 1.14E-05 1.21E-12 2.361 -250 65049 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ACFHCETCK [K].acFHcETck.[M] N-Term(TMT6plex); C2(Carbamidomethyl); C5(Carbamidomethyl); C8(Carbamidomethyl); K9(TMT6plex) 1 Q543N3 LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 Q543N3 LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 0 3 3 0.6719 0 1 1 1 557.60095 1670.7883 1670.78532 1.78 0.00099 0/0 0 0 5134778.5 HCD 30 MS2 55.91953 455.8 110 54.1943 15073 15073 15068 QEplus033719.raw F4 420.5 533.3 508.8 310.6 505.3 456.4 71 4.42 1 FALSE 1.14E-05 5.67E-06 1.094 -250 65053 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMPEQTGEK [R].sMPEQTGEk.[-] N-Term(TMT6plex); K9(TMT6plex) 3 P62889 60S ribosomal protein L30 OS=Mus musculus OX=10090 GN=Rpl30 PE=1 SV=2 Q5PR15; P62889; A0A2I3BQF4 60S ribosomal protein L30 OS=Mus musculus OX=10090 GN=Rpl30 PE=2 SV=1; 60S ribosomal protein L30 OS=Mus musculus OX=10090 GN=Rpl30 PE=1 SV=2; 60S ribosomal protein L30 OS=Mus musculus OX=10090 GN=Rpl30 PE=1 SV=1 0 3 3 0.5918 0 1 1 1 488.93076 1464.77771 1464.77685 0.59 0.00029 0/0 0 0 66949456 HCD 30 MS2 63.77939 709.9 19.851 54.1965 15074 15074 15068 QEplus033719.raw F4 700.6 622.6 786.5 555.6 818.8 775.2 330 3.16 1 FALSE 1.14E-05 1.82E-05 0.998 -250 65074 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGEDNSHTQDTEDLEK [K].qGEDNSHTQDTEDLEk.[D] N-Term(TMT6plex); K16(TMT6plex) 4 Q80WJ7 Protein LYRIC OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1 F6ZSG0; Q80WJ7; F6QFT1; F6QHD1 Protein LYRIC (Fragment) OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1; Protein LYRIC OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1; Protein LYRIC (Fragment) OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=8; Protein LYRIC (Fragment) OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=2 0 3 3 0.7457 0 1 1 1 768.70276 2304.09372 2304.09918 -2.37 -0.00182 0/0 0 0 5137591 HCD 30 MS2 0 290.6 110 54.2037 15077 15077 15068 QEplus033719.raw F4 282.5 208.5 331.2 294.2 250 377.1 97 6.45 1 FALSE 1.14E-05 6.32E-15 2.794 -250 65089 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTGASGSFK [K].gTGASGSFk.[L] N-Term(TMT6plex); K9(TMT6plex) 9 P43274; Q1WWK3; P15864 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2;Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1;Histone H1.2 OS=Mus musculus OX=10090 GN=H1-2 PE=1 SV=2 P43274; Q1WWK3; I7HFT9; P43276; Q3UXH2; Q3U292; P15864; Q07133; P43277 "Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2; Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1; H1.6 linker histone, cluster member OS=Mus musculus OX=10090 GN=H1f6 PE=1 SV=1; Histone H1.5 OS=Mus musculus OX=10090 GN=H1-5 PE=1 SV=2; H15 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=H1f2 PE=2 SV=1; H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f3 PE=2 SV=1; Histone H1.2 OS=Mus musculus OX=10090 GN=H1-2 PE=1 SV=2; Histone H1t OS=Mus musculus OX=10090 GN=H1-6 PE=1 SV=4; Histone H1.3 OS=Mus musculus OX=10090 GN=H1-3 PE=1 SV=2" 0 3 3 0.487 0 1 1 1 423.91238 1269.7226 1269.72032 1.79 0.00076 0/0 0 0 37724632 HCD 30 MS2 17.73635 470.4 36.416 54.2135 15080 15080 15079 QEplus033719.raw F4 422.3 455.7 467.9 343.8 723.9 409 297 3.45 3 FALSE 1.14E-05 0.0005099 0.721 -250 65115 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQYEEEQEAK [R].eQYEEEQEAk.[A] N-Term(TMT6plex); K10(TMT6plex) 3 Q5SX40; Q5SX39 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1 Q5SX40; Q5SX39; B2RWX0 "Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1" 0 2 2 0.6415 0 1 1 1 870.93884 1740.87041 1740.86923 0.68 0.00059 0/0 0 0 7172671 HCD 30 MS2 0 452.8 110 54.221 15083 15083 15079 QEplus033719.raw F4 564.9 37.4 144.5 1359.7 49.5 560.6 199 4.24 2 FALSE 1.14E-05 9.48E-08 1.432 -250 65120 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DWYPAHSR [R].dWYPAHSR.[L] N-Term(TMT6plex) 4 Q545F4 Heat shock 27 kDa protein OS=Mus musculus OX=10090 GN=Hspb1 PE=2 SV=1 Q545F4; D3YZ06; P14602-3; P14602-2 Heat shock 27 kDa protein OS=Mus musculus OX=10090 GN=Hspb1 PE=2 SV=1; Heat shock protein beta-1 OS=Mus musculus OX=10090 GN=Hspb1 PE=1 SV=1; Isoform C of Heat shock protein beta-1 OS=Mus musculus OX=10090 GN=Hspb1; Isoform B of Heat shock protein beta-1 OS=Mus musculus OX=10090 GN=Hspb1 0 3 3 0.6173 0 1 1 1 420.88269 1260.63352 1260.63229 0.98 0.00041 0/0 0 0 6445980 HCD 30 MS2 30.35906 434.1 110 54.2235 15084 15084 15079 QEplus033719.raw F4 622.9 272.3 439.6 353.9 427.1 488.9 98 3.24 1 FALSE 1.14E-05 0.00072 0.691 -250 65127 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNWEQPQNQNQTQHK [R].gNWEQPQNQNQTQHk.[Q] N-Term(TMT6plex); K15(TMT6plex) 14 Q80X50 Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1 A0A0G2JDV6; Q80X50-4; Q80X50-3; A0A0G2JDT1; A0A0G2JGD0; Q80X50-5; A0A0H2UH17; Q8BJ53; Q80X50-2; Q80X50; A0A0G2JG47; A0A0G2JE24; Q812D5; Q812D4 Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Isoform 4 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Isoform 3 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Ubiquitin-associated protein 2-like (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Ubiquitin-associated protein 2-like (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Isoform 5 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; UBA domain-containing protein OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1; Isoform 2 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Ubiquitin-associated protein 2-like (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Ubiquitin-associated protein 2-like (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Lingerer protein-2a OS=Mus musculus OX=10090 GN=lig-2a PE=2 SV=1; Lingerer protein-2b OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1 0 3 3 0.7674 0 1 1 1 765.72614 2295.16385 2295.16306 0.34 0.00026 0/0 0 0 3709341 HCD 30 MS2 0 203.6 110 54.226 15085 15085 15079 QEplus033719.raw F4 219.7 167.5 215.8 154 261.3 203.5 288 6.45 1 FALSE 1.14E-05 6.31E-16 3.029 -250 65150 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNNITTGK [K].dNNITTGk.[I] N-Term(TMT6plex); K8(TMT6plex) 3 P70303 CTP synthase 2 OS=Mus musculus OX=10090 GN=Ctps2 PE=1 SV=1 P70303; P70303-3; P70303-2 CTP synthase 2 OS=Mus musculus OX=10090 GN=Ctps2 PE=1 SV=1; Isoform 3 of CTP synthase 2 OS=Mus musculus OX=10090 GN=Ctps2; Isoform 2 of CTP synthase 2 OS=Mus musculus OX=10090 GN=Ctps2 0 2 2 0.518 0 1 1 1 660.883 1320.75871 1320.75235 4.82 0.00318 0/0 0 0 9550366 HCD 30 MS2 57.99727 1155.8 101.555 54.2359 15089 15089 15079 QEplus033719.raw F4 1232 1038.3 1081.5 819.3 1772.2 991.5 549 2.78 1 FALSE 3.35E-05 0.001141 0.65 -250 65151 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNNLTTGK [K].dNNLTTGk.[I] N-Term(TMT6plex); K8(TMT6plex) 2 P70698 CTP synthase 1 OS=Mus musculus OX=10090 GN=Ctps1 PE=1 SV=2 Q3TPP2; P70698 CTP_synth_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ctps PE=2 SV=1; CTP synthase 1 OS=Mus musculus OX=10090 GN=Ctps1 PE=1 SV=2 0 2 2 0.518 0 1 2 2 660.883 1320.75871 1320.75235 4.82 0.00318 0/0 0 0 9550366 HCD 30 MS2 57.99727 1155.8 101.555 54.2359 15089 15089 15079 QEplus033719.raw F4 1232 1038.3 1081.5 819.3 1772.2 991.5 549 2.78 1 FALSE 3.35E-05 0.001141 0.65 -250 65158 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNILER [K].sNILER.[N] N-Term(TMT6plex) 6 Q3UJ44 Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=2 SV=1 D3YTL5; Q3UJ44; Q3TNN6; D3YU77; Q99LB4; P24452 Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Capg PE=1 SV=1; Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=2 SV=1; Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=2 SV=1; Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Capg PE=1 SV=1; Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=1 SV=1; Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=1 SV=2 0 2 2 0.125 0 1 1 1 480.78882 960.57036 960.56756 2.91 0.0014 0/0 0 0 28262760 HCD 30 MS2 20.4868 629.4 33.822 54.2455 15092 15092 15090 QEplus033719.raw F4 617.4 588.4 719.2 492.3 704.7 654.2 333 2.16 1 FALSE 0.002413 0.04752 0.15 -250 65178 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYNVHQHDEL [K].eYNVHQHDEL.[-] N-Term(TMT6plex) 1 Q3UU11 Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp7 PE=2 SV=1 Q3UU11 Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp7 PE=2 SV=1 0 3 3 0.5566 0 1 1 1 504.91452 1512.72901 1512.72804 0.64 0.00032 0/0 0 0 9157808 HCD 30 MS2 58.90944 1157.7 100.752 54.2501 15094 15094 15090 QEplus033719.raw F4 1326.2 818 1218.5 1130.9 1107.7 1345.2 88 2.21 1 FALSE 0.003464 0.06695 0.096 -250 65187 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGPTPQEAIQR [K].gGPTPQEAIQR.[L] N-Term(TMT6plex) 1 Q9D8B3 Charged multivesicular body protein 4b OS=Mus musculus OX=10090 GN=Chmp4b PE=1 SV=2 Q9D8B3 Charged multivesicular body protein 4b OS=Mus musculus OX=10090 GN=Chmp4b PE=1 SV=2 0 2 2 0.6368 0 1 1 1 691.88354 1382.75981 1382.75894 0.63 0.00043 0/0 0 0 8563814 HCD 30 MS2 0 483.8 110 54.2526 15095 15095 15090 QEplus033719.raw F4 503.6 411.1 514.8 443.5 538.7 490.9 321 4.24 1 FALSE 1.14E-05 2.82E-07 1.342 -250 65193 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQLMSQEER [K].eQLMSQEER.[S] N-Term(TMT6plex) 3 P36916 Guanine nucleotide-binding protein-like 1 OS=Mus musculus OX=10090 GN=Gnl1 PE=1 SV=4 Q52KE3; P36916; A2VDH5 Gnal1 protein (Fragment) OS=Mus musculus OX=10090 GN=Gnl1 PE=2 SV=1; Guanine nucleotide-binding protein-like 1 OS=Mus musculus OX=10090 GN=Gnl1 PE=1 SV=4; Gnal1 protein (Fragment) OS=Mus musculus OX=10090 GN=Gnl1 PE=2 SV=1 0 2 2 0.2375 0 1 1 1 689.85052 1378.69377 1378.6834 7.53 0.00519 0/0 0 0 14183696 HCD 30 MS2 31.19425 645.5 110 54.2551 15096 15096 15090 QEplus033719.raw F4 673.5 555.6 709.8 535.4 731.2 667.3 149 2.4 1 FALSE 1.14E-05 0.0004814 0.725 -250 65212 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASMQQQQQLASAR [R].aSMQQQQQLASAR.[N] N-Term(TMT6plex) 9 Q2VPR3 2500003M10Rik protein (Fragment) OS=Mus musculus OX=10090 GN=Chtop PE=2 SV=1 Q2VPR3; E9PW20; D3Z7T7; Q9CY57-4; D3YZA1; Q9CY57-5; Q9CY57-2; Q9CY57-3; Q9CY57 2500003M10Rik protein (Fragment) OS=Mus musculus OX=10090 GN=Chtop PE=2 SV=1; Chromatin target of PRMT1 protein OS=Mus musculus OX=10090 GN=Chtop PE=1 SV=1; Chromatin target of PRMT1 protein (Fragment) OS=Mus musculus OX=10090 GN=Chtop PE=1 SV=1; Isoform 4 of Chromatin target of PRMT1 protein OS=Mus musculus OX=10090 GN=Chtop; Chromatin target of PRMT1 protein (Fragment) OS=Mus musculus OX=10090 GN=Chtop PE=1 SV=8; Isoform 5 of Chromatin target of PRMT1 protein OS=Mus musculus OX=10090 GN=Chtop; Isoform 2 of Chromatin target of PRMT1 protein OS=Mus musculus OX=10090 GN=Chtop; Isoform 3 of Chromatin target of PRMT1 protein OS=Mus musculus OX=10090 GN=Chtop; Chromatin target of PRMT1 protein OS=Mus musculus OX=10090 GN=Chtop PE=1 SV=2 0 2 2 0.7221 0 1 1 1 838.4411 1675.87493 1675.87472 0.12 0.0001 0/0 0 0 8689627 HCD 30 MS2 14.8967 362.1 110 54.2622 15099 15099 15090 QEplus033719.raw F4 345.9 322.6 416.6 295.3 390.7 401.2 283 4.93 1 FALSE 1.14E-05 1.22E-12 2.36 -250 65250 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELTNQQEASVER [R].eLTNQQEASVER.[Q] N-Term(TMT6plex) 8 E9Q586 Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1 E9Q3M3; E9Q586; O08788-2; D3YX34; Q3T9V8; O08788; Q6NZM3; Q3TB96 Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Isoform 2 of Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=3; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1 0 2 2 0.6488 0 1 1 1 816.92334 1632.8394 1632.83904 0.22 0.00018 0/0 0 0 5539652 HCD 30 MS2 0 207.8 110 54.277 15104 15104 15101 QEplus033719.raw F4 211.8 177.7 225.8 184.2 236.3 210.7 218 4.84 1 FALSE 1.14E-05 4.62E-12 2.25 -250 65257 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DPSAVAK [K].dPSAVAk.[H] N-Term(TMT6plex); K7(TMT6plex) 4 P06745 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4 Q3ZBD7; B2RXT5; P06745; B7ZWL9 SWISS-PROT:Q3ZBD7 (Bos taurus) Glucose-6-phosphate isomerase; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1 0 2 2 0.3559 0 1 1 1 573.35101 1145.69475 1145.69304 1.49 0.00085 0/0 0 0 36896324 HCD 30 MS2 28.63519 862.7 28.759 54.2793 15105 15105 15101 QEplus033719.raw F4 1128.3 552.2 880.6 862.7 836.4 915.9 414 2.22 1 TRUE 0.0005848 0.008731 0.426 -250 65283 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHAGQVTCVAASPHK [R].aHAGQVTcVAASPHk.[D] N-Term(TMT6plex); C8(Carbamidomethyl); K15(TMT6plex) 2 Q99J09 Methylosome protein 50 OS=Mus musculus OX=10090 GN=Wdr77 PE=1 SV=1 Q99J09; F7D5L2 Methylosome protein 50 OS=Mus musculus OX=10090 GN=Wdr77 PE=1 SV=1; Methylosome protein 50 (Fragment) OS=Mus musculus OX=10090 GN=Wdr77 PE=1 SV=1 0 4 4 0.693 0 1 1 1 498.77679 1992.08535 1992.08493 0.21 0.0001 0/0 0 0 7640802.5 HCD 30 MS2 47.83118 798.5 110 54.2867 15108 15108 15101 QEplus033719.raw F4 1040.7 514 789.8 804.9 681 960.4 408 4.3 1 FALSE 1.14E-05 7.36E-13 2.402 -250 65295 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAAGSASSSTSLK [R].nAAGSASSSTSLk.[V] N-Term(TMT6plex); K13(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A2AT70; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.7301 0 1 1 1 819.9574 1638.90752 1638.90628 0.75 0.00062 0/0 0 0 3491132.25 HCD 30 MS2 0 251.7 110 54.2917 15110 15110 15101 QEplus033719.raw F4 310.9 54.9 202.5 452.4 60.8 429 408 5.15 2 FALSE 1.14E-05 1.03E-14 2.754 -250 65304 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSQPLASK [K].sSQPLASk.[Q] N-Term(TMT6plex); K8(TMT6plex) 8 A0A384DV79; A0A338P6F6 High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1;High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1 A0A338P6E8; A0A384DV79; A0A338P6F6; Q566K0; A0A338P6G6; Q3TVP0; Q3TE85; A0A338P6D0 High mobility group AT-hook protein 1 OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1; High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1; High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1; High mobility group AT-hook protein 1 OS=Mus musculus OX=10090 GN=Hmga1 PE=2 SV=1; High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1; High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1 0 2 2 0.5506 0 1 1 1 638.39362 1275.77995 1275.76727 9.94 0.00634 0/0 0 0 9380805 HCD 30 MS2 25.68591 957.6 110 54.3015 15113 15113 15112 QEplus033719.raw F4 874.1 895.1 1023.4 815 1141.7 996.4 499 2.67 2 FALSE 1.14E-05 0.0001358 0.832 -250 65319 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAAGSASSSTSLK [R].nAAGSASSSTSLk.[V] N-Term(TMT6plex); K13(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A2AT70; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.4967 0 1 1 1 546.97375 1638.90671 1638.90628 0.26 0.00014 0/0 0 0 13594774 HCD 30 MS2 12.48159 711.7 110 54.3113 15116 15116 15114 QEplus033719.raw F4 782.6 418.8 718.3 848.7 569 932.7 405 4.59 2 FALSE 1.14E-05 6.51E-09 1.653 -250 65324 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQSEEIQKK [K].gQSEEIQkk.[R] N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex) 2 Q3UW40 TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1 Q3UW40; Q8BP67 TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1; 60S ribosomal protein L24 OS=Mus musculus OX=10090 GN=Rpl24 PE=1 SV=2 1 3 3 0.5245 0 1 1 1 578.68512 1734.04081 1734.03646 2.51 0.00145 0/0 0 0 10965073 HCD 30 MS2 10.5558 1066.7 110 54.3138 15117 15117 15114 QEplus033719.raw F4 1219.8 785.4 1208.3 1008.2 1202.3 976.1 419 2.65 1 FALSE 1.14E-05 3.91E-05 0.935 -250 65329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTLAYDK [R].hTLAYDk.[G] N-Term(TMT6plex); K7(TMT6plex) 1 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 0 3 3 0.6575 0 1 1 1 435.92361 1305.75629 1305.75671 -0.32 -0.00014 0/0 0 0 10337454 HCD 30 MS2 34.52964 655.3 94.875 54.3161 15118 15118 15114 QEplus033719.raw F4 745.6 566.9 666 525.6 769.6 658.3 502 3.27 1 FALSE 2.26E-05 0.00104 0.659 -250 65344 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGDSCESIIR [R].qGDScESIIR.[R] N-Term(TMT6plex); C5(Carbamidomethyl) 3 Q8BMJ2 "Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2" Q6ZPT2; Q8BMJ2; Q99JK2 "Leucyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1; Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2; Lars protein OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1" 0 2 2 0.6525 0 1 1 1 697.3512 1393.69512 1393.69429 0.59 0.00041 0/0 0 0 16326977 HCD 30 MS2 17.58532 682 110 54.3211 15120 15120 15114 QEplus033719.raw F4 686.9 590.2 704.3 602.9 793.5 713.9 138 3.54 1 FALSE 1.14E-05 8.78E-08 1.438 -250 65380 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCVVGTK [K].gcVVGTk.[K] N-Term(TMT6plex); C2(Carbamidomethyl); K7(TMT6plex) 6 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB15; Q99N25; Q3U9L3; Q3T9U9; P27659 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Ribosomal protein L3 (Fragment) OS=Mus musculus OX=10090 GN=Rp13 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3 0 2 2 0.4195 0 1 1 1 589.85254 1178.6978 1178.69675 0.89 0.00053 0/0 0 0 89439672 HCD 30 MS2 5.665093 856.7 16.369 54.3384 15126 15126 15125 QEplus033719.raw F4 817.7 643.9 889 844.1 1073.6 871.9 250 2.67 1 FALSE 0.0009075 0.01262 0.364 -250 65390 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQNTVETLQR [R].dQNTVETLQR.[M] N-Term(TMT6plex) 4 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q3TTX2; Q62261; A0A0A0MQG2; Q62261-2 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 2 2 0.6309 0 1 1 1 716.88348 1432.75969 1432.75934 0.25 0.00018 0/0 0 0 9254690 HCD 30 MS2 0 333.8 110 54.3409 15127 15127 15125 QEplus033719.raw F4 347.1 259.5 397.3 294.1 301.3 403.4 293 3.63 2 FALSE 1.14E-05 3.93E-08 1.504 -250 65399 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDEVQVVR [K].dDEVQVVR.[G] N-Term(TMT6plex) 3 Q4FZH2 Ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1 Q3U7N1; B1ARA3; Q4FZH2 KOW domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; 60S ribosomal protein L26 (Fragment) OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1; Ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1 0 2 2 0.5248 0 1 1 1 594.82526 1188.64324 1188.64218 0.89 0.00053 0/0 0 0 92140424 HCD 30 MS2 3.246095 546.1 15.461 54.3432 15128 15128 15125 QEplus033719.raw F4 552.3 450.9 623.1 473.3 578.1 599 318 2.82 1 FALSE 1.14E-05 0.000449 0.731 -250 65417 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIYVGR [K].qIYVGR.[A] N-Term(TMT6plex) 5 P29341 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2 P29341; Q3U8U8; Q9D4E6; Q8BN32; Q99KL3 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc6 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1 0 2 2 0.3763 0 1 1 1 482.79276 964.57823 964.57773 0.52 0.00025 0/0 0 0 27425264 HCD 30 MS2 22.88947 920.5 41.076 54.3477 15130 15130 15125 QEplus033719.raw F4 913.4 807.3 1025.6 762.4 1040.5 974 73 1.86 1 FALSE 0.007862 0.1297 -0.059 -250 65446 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVYTSGK [R].aVYTSGk.[A] N-Term(TMT6plex); K7(TMT6plex) 4 Q3ULG5 DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1 Q3ULG5; Q3UC10; Q8C5L1; P97311 DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=2 SV=1; DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Mcm6 PE=2 SV=1; DNA replication licensing factor MCM6 OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1 0 2 2 0.5977 0 1 1 1 592.35895 1183.71062 1183.70869 1.63 0.00096 0/0 0 0 11922026 HCD 30 MS2 12.9017 1054 110 54.3549 15133 15133 15125 QEplus033719.raw F4 1035.1 1109.1 924.9 611.7 1913 729.9 204 2.56 1 FALSE 0.0003496 0.006908 0.46 -250 65463 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALDCSSSIR [R].aLDcSSSIR.[Q] N-Term(TMT6plex); C4(Carbamidomethyl) 2 Q9R190 Metastasis-associated protein MTA2 OS=Mus musculus OX=10090 GN=Mta2 PE=1 SV=1 Q9R190; Q3UDZ8 Metastasis-associated protein MTA2 OS=Mus musculus OX=10090 GN=Mta2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Mta2 PE=2 SV=1 0 2 2 0.4101 0 1 1 1 619.32391 1237.64055 1237.6408 -0.2 -0.00013 0/0 0 0 6102813.5 HCD 30 MS2 35.68908 739.4 110 54.3599 15135 15135 15125 QEplus033719.raw F4 1019.7 521.1 622.9 760.9 900.8 610.8 200 3.17 1 FALSE 1.14E-05 1.41E-05 1.019 -250 65470 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ACFHCETCK [K].acFHcETck.[M] N-Term(TMT6plex); C2(Carbamidomethyl); C5(Carbamidomethyl); C8(Carbamidomethyl); K9(TMT6plex) 1 Q543N3 LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 Q543N3 LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 0 2 2 0.7429 0 1 1 1 835.89709 1670.78691 1670.78532 0.95 0.00079 0/0 0 0 6071399 HCD 30 MS2 0 443.8 110 54.3673 15137 15137 15136 QEplus033719.raw F4 353.2 533.7 541.9 301.5 505.5 426.9 68 3.85 1 FALSE 1.14E-05 1.20E-05 1.033 -250 65474 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTEQDLK [K].tTEQDLk.[D] N-Term(TMT6plex); K7(TMT6plex) 13 Q8BUM1 TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1 Q8R0B4; Q8BUM1; C9DT14; A0A087WR97; D2KPZ5; A0A087WQA5; Q6VYI5; A0A087WSE4; A0A087WRZ5; Q544R5; Q8BLD4; Q6VYI4; Q05C33 TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1; TAR DNA-binding protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1; TAR DNA-binding protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1 0 2 2 0.0273 0 1 1 1 646.87732 1292.74736 1292.7462 0.9 0.00058 0/0 0 0 19060212 HCD 30 MS2 10.1407 1193.9 110 54.3698 15138 15138 15136 QEplus033719.raw F4 1321.2 1149.6 1194.4 934.9 1516.2 1047.1 426 2.56 1 FALSE 0.003142 0.06122 0.111 -250 65483 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MLSCAGADR [K].mLScAGADR.[LS] N-Term(TMT6plex); C4(Carbamidomethyl) 6 A2AM97 Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1 P86048; A0A1B0GXC3; I7HLV2; Q3THJ6; A2AM97; B7FAU6 60S ribosomal protein L10-like OS=Mus musculus OX=10090 GN=Rpl10l PE=2 SV=1; 60S ribosomal protein L10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=4 SV=1; 60S ribosomal protein L10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=1 SV=1; Ribosomal_L16 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1; Ribosomal protein 10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=4 SV=1 0 2 2 0.6291 0 1 1 1 605.30017 1209.59307 1209.59174 1.09 0.00066 0/0 0 0 221288544 HCD 30 MS2 17.88621 767.5 8.381 54.372 15139 15139 15136 QEplus033719.raw F4 712.2 725.5 915 622.1 814.4 815.5 85 3.02 1 FALSE 1.14E-05 5.60E-05 0.905 -250 65487 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVGTFAR [R].aVGTFAR.[A] N-Term(TMT6plex) 13 Q9R190 Metastasis-associated protein MTA2 OS=Mus musculus OX=10090 GN=Mta2 PE=1 SV=1 Q6ZPV1; A4FTZ3; E9Q794; Q3TZP3; H3BLE1; Q3UKM9; Q3UII8; Q3U3A7; Q9R190; Q3UDZ8; Q924K8; Q3TY62; Q924K8-2 MKIAA1266 protein (Fragment) OS=Mus musculus OX=10090 GN=Mta3 PE=2 SV=1; Mta3 protein OS=Mus musculus OX=10090 GN=Mta3 PE=2 SV=1; Metastasis-associated protein MTA3 OS=Mus musculus OX=10090 GN=Mta3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mta2 PE=2 SV=1; Metastasis-associated protein MTA3 (Fragment) OS=Mus musculus OX=10090 GN=Mta3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mta3 PE=2 SV=1; Metastasis-associated protein MTA3 OS=Mus musculus OX=10090 GN=Mta3 PE=1 SV=1; Metastasis-associated protein MTA3 OS=Mus musculus OX=10090 GN=Mta3 PE=1 SV=1; Metastasis-associated protein MTA2 OS=Mus musculus OX=10090 GN=Mta2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Mta2 PE=2 SV=1; Metastasis-associated protein MTA3 OS=Mus musculus OX=10090 GN=Mta3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mta3 PE=2 SV=1; Isoform 2 of Metastasis-associated protein MTA3 OS=Mus musculus OX=10090 GN=Mta3 0 2 2 0.3568 0 1 1 1 475.78473 950.56218 950.56208 0.1 0.00005 0/0 0 0 16737544 HCD 30 MS2 13.72196 1100.7 110 54.3745 15140 15140 15136 QEplus033719.raw F4 1071.6 1051.4 1265.9 832.5 1229.4 1153.6 55 2.27 1 FALSE 0.001736 0.0295 0.219 -250 65507 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APQVDVDR [K].aPQVDVDR.[A] N-Term(TMT6plex) 2 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 Q9DBT1; Q9CZD3 WHEP-TRS domain-containing protein OS=Mus musculus OX=10090 GN=F13a1 PE=2 SV=1; Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 0 2 2 0.4575 0 1 1 1 564.81531 1128.62334 1128.62105 2.03 0.00114 0/0 0 0 11009770 HCD 30 MS2 22.58734 891.7 110 54.3795 15142 15142 15136 QEplus033719.raw F4 1029.6 721.9 943.4 766.3 999 890.2 171 2.47 1 FALSE 1.14E-05 0.0001214 0.841 -250 65517 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APSPEKAEEESER [K].aPSPEkAEEESER.[L] N-Term(TMT6plex); K6(TMT6plex) 3 Q61024 Asparagine synthetase [glutamine-hydrolyzing] OS=Mus musculus OX=10090 GN=Asns PE=1 SV=3 Q3TIA9; Q3TV20; Q61024 Asparagine synthetase [glutamine-hydrolyzing] OS=Mus musculus OX=10090 GN=Asns PE=2 SV=1; Asparagine synthetase [glutamine-hydrolyzing] OS=Mus musculus OX=10090 GN=Asns PE=2 SV=1; Asparagine synthetase [glutamine-hydrolyzing] OS=Mus musculus OX=10090 GN=Asns PE=1 SV=3 1 3 3 0.5656 0 1 1 1 639.67023 1916.99613 1916.99656 -0.22 -0.00014 0/0 0 0 7107610 HCD 30 MS2 15.35636 722.3 110 54.3821 15143 15143 15136 QEplus033719.raw F4 712.2 743.2 769.6 626.1 826.5 656.1 276 3.43 1 FALSE 1.14E-05 8.35E-08 1.442 -250 65525 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AASHEQAAAALK [R].aASHEQAAAALk.[N] N-Term(TMT6plex); K12(TMT6plex) 11 Q3UP61 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dlg1 PE=2 SV=1 Q571K0; S4R2T8; Q811D0-2; Q3TPP5; Q3UP61; H7BWY4; Q811D0; F6UDT8; Q811D0-3; E9Q9H0; D3Z3B8 MKIAA4187 protein (Fragment) OS=Mus musculus OX=10090 GN=Dlg1 PE=2 SV=1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1; Isoform 2 of Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Dlg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dlg1 PE=2 SV=1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1; Disks large homolog 1 (Fragment) OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1; Isoform 3 of Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1 0 3 3 0.7614 0 1 1 1 542.65186 1625.94101 1625.93753 2.15 0.00116 0/0 0 0 10081584 HCD 30 MS2 9.266438 682.8 110 54.3845 15144 15144 15136 QEplus033719.raw F4 705 565.5 746.6 651.4 678.8 749.3 414 5.49 1 FALSE 1.14E-05 2.30E-11 2.118 -250 65531 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVALAVGGR [R].hVALAVGGR.[E] N-Term(TMT6plex) 2 Q9CQ48 NudC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nudcd2 PE=1 SV=1 E0CYQ2; Q9CQ48 NudC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nudcd2 PE=1 SV=1; NudC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nudcd2 PE=1 SV=1 0 3 3 0.7642 0 1 1 1 370.23029 1108.6763 1108.67884 -2.29 -0.00085 0/0 0 0 7277718 HCD 30 MS2 34.83675 372 110 54.387 15145 15145 15136 QEplus033719.raw F4 399.9 276.2 394.9 291.1 448.5 421.1 131 4.24 1 FALSE 1.14E-05 3.21E-05 0.951 -250 65538 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPVLSQTEAR [K].qPVLSQTEAR.[E] N-Term(TMT6plex) 1 P99026 Proteasome subunit beta type-4 OS=Mus musculus OX=10090 GN=Psmb4 PE=1 SV=1 P99026 Proteasome subunit beta type-4 OS=Mus musculus OX=10090 GN=Psmb4 PE=1 SV=1 0 2 2 0.4637 0 1 1 1 679.38623 1357.76518 1357.76369 1.1 0.00075 0/0 0 0 19278428 HCD 30 MS2 0 488.5 110 54.3969 15148 15148 15147 QEplus033719.raw F4 492.6 444.3 521.8 410.1 523.1 539.4 380 3.86 1 FALSE 1.14E-05 1.97E-08 1.561 -250 65548 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALSTGEK [R].aLSTGEk.[G] N-Term(TMT6plex); K7(TMT6plex) 5 Q3UAJ1 Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1 Q3TE63; Q3UAJ1; Q5SVY2; Q9CZK9; A0A1L1SST0 Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1 0 2 2 0.244 0 1 1 1 582.35626 1163.70525 1163.70361 1.41 0.00082 0/0 0 0 56092196 HCD 30 MS2 9.266109 800 18.021 54.3991 15149 15149 15147 QEplus033719.raw F4 1047.6 563.7 886.9 771.5 817.1 713.5 280 2.5 1 FALSE 0.0008991 0.0124 0.367 -250 65558 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGDTYERPK [K].vGDTYERPk.[D] N-Term(TMT6plex); K9(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; B9EHT6; A0A087WR50; Q3UGY5; Q4KL80; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.7413 0 1 1 1 508.29343 1522.86573 1522.86296 1.81 0.00092 0/0 0 0 242161120 HCD 30 MS2 29.55903 928.3 6.736 54.4014 15150 15150 15147 QEplus033719.raw F4 983.9 869.3 1145 1091.6 669.7 810.3 466 3.17 3 FALSE 1.14E-05 0.0002049 0.797 -250 65560 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAAEQDVEK [K].eAAEQDVEk.[K] N-Term(TMT6plex); K9(TMT6plex) 1 P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 0 3 3 0.5898 0 1 1 1 492.93655 1476.79511 1476.79461 0.34 0.00017 0/0 0 0 33607696 HCD 30 MS2 17.137 954.4 59.655 54.4037 15151 15151 15147 QEplus033719.raw F4 965.7 749.1 1018.7 883.6 1033.3 1076.2 324 3.34 1 FALSE 5.44E-05 0.002503 0.577 -250 65582 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KDPLEGR [R].kDPLEGR.[V] N-Term(TMT6plex); K1(TMT6plex) 1 Q6ZQI3 Malectin OS=Mus musculus OX=10090 GN=Mlec PE=1 SV=2 Q6ZQI3 Malectin OS=Mus musculus OX=10090 GN=Mlec PE=1 SV=2 1 3 3 0.2573 0 1 1 1 424.92868 1272.77149 1272.76761 3.05 0.00129 0/0 0 0 11765672 HCD 30 MS2 19.51922 927.7 110 54.4106 15154 15154 15147 QEplus033719.raw F4 920.7 812.8 976.9 808.5 1085.6 961.5 285 2.06 1 FALSE 0.005324 0.09092 0.032 -250 65594 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGDTYERPK [K].vGDTYERPk.[D] N-Term(TMT6plex); K9(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; B9EHT6; A0A087WR50; Q3UGY5; Q4KL80; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.736 0 1 1 1 761.93744 1522.8676 1522.86296 3.05 0.00232 0/0 0 0 8522737 HCD 30 MS2 0 564.9 110 54.4157 15156 15156 15147 QEplus033719.raw F4 563.6 529.8 675.2 701.6 378.6 540.7 454 3.22 3 FALSE 1.14E-05 5.70E-05 0.904 -250 65602 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTLAYDK [R].hTLAYDk.[G] N-Term(TMT6plex); K7(TMT6plex) 1 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 0 3 3 0.621 0 1 1 1 435.92352 1305.75602 1305.75671 -0.53 -0.00023 0/0 0 0 11289388 HCD 30 MS2 51.96786 462.6 45.724 54.418 15157 15157 15147 QEplus033719.raw F4 498.6 359.2 487.2 388 537.3 505 504 3.14 1 FALSE 0.0006035 0.008852 0.424 -250 65623 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGTDVPK [R].kGTDVPk.[CW] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 5 Q542G9 Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1 Q9CZI7; B0V2N5; Q99KH3; Q542G9; Q3UCD3 Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1 1 3 3 0.4772 0 1 1 1 477.97644 1431.91477 1431.91383 0.66 0.00031 0/0 0 0 23058316 HCD 30 MS2 18.59176 1171 67.333 54.4301 15161 15161 15158 QEplus033719.raw F4 2184.7 934.3 1245.7 1068.5 737 855.8 273 2.41 1 FALSE 0.003624 0.06962 0.089 -250 65638 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDIYDQK [R].rDIYDQk.[L] N-Term(TMT6plex); K7(TMT6plex) 5 Q9DAW9 Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 A0A0G2JFC8; Q9DAW9; A0A0G2JFI6; Q99JN5; A0A0G2JDV8 Calponin-3 (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1; Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1; Calponin-3 (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=4; Cnn3 protein (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 1 3 3 0.351 0 1 1 1 465.93845 1395.80078 1395.79963 0.82 0.00038 0/0 0 0 12962033 HCD 30 MS2 49.49182 1301.4 109.387 54.4348 15163 15163 15158 QEplus033719.raw F4 1602.4 991.7 1292.2 1260.9 1502.6 1158.4 356 3.02 1 FALSE 0.0001401 0.003191 0.552 -250 65646 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQLETEK [R].qQLETEk.[K] N-Term(TMT6plex); K7(TMT6plex) 5 Q4KML7 Ezrin OS=Mus musculus OX=10090 GN=Ezr PE=1 SV=1 Q8CBU4; Q3UXR4; Q4KML7; Q3TCP5; Q3UL48 FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; Ezrin OS=Mus musculus OX=10090 GN=Ezr PE=1 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1 0 2 2 0.2509 0 1 1 1 667.39081 1333.77434 1333.77275 1.19 0.00079 0/0 0 0 12926202 HCD 30 MS2 35.87003 871.6 110 54.4373 15164 15164 15158 QEplus033719.raw F4 858.5 775.1 868.9 934.3 907.3 885.8 532 2.83 1 FALSE 0.0002218 0.004665 0.51 -250 65680 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGDGTITTK [K].dGDGTITTk.[E] N-Term(TMT6plex); K9(TMT6plex) 2 P0DP27 Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1 P0DP27; Q3UKW2 Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=1 SV=1 0 2 2 0.6566 0 1 1 1 683.38531 1365.76335 1365.76258 0.57 0.00039 0/0 0 0 67329000 HCD 30 MS2 4.419313 678.6 26.683 54.4544 15170 15170 15169 QEplus033719.raw F4 669.1 592.6 672.1 537.3 973.3 627.2 365 2.97 1 FALSE 1.14E-05 9.06E-06 1.056 -250 65689 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DPGVLDR [K].dPGVLDR.[M] N-Term(TMT6plex) 1 P50543 Protein S100-A11 OS=Mus musculus OX=10090 GN=S100a11 PE=1 SV=1 P50543 Protein S100-A11 OS=Mus musculus OX=10090 GN=S100a11 PE=1 SV=1 0 2 2 0.0306 0 1 1 1 500.78531 1000.56334 1000.56248 0.87 0.00043 0/0 0 0 50966380 HCD 30 MS2 23.40508 740.9 24.211 54.4567 15171 15171 15169 QEplus033719.raw F4 820 736.8 781.6 502.3 988.8 615.7 117 2.29 1 FALSE 0.002611 0.05178 0.137 -250 65695 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TMVVHEK [R].tMVVHEk.[Q] N-Term(TMT6plex); K7(TMT6plex) 1 P08228 Superoxide dismutase [Cu-Zn] OS=Mus musculus OX=10090 GN=Sod1 PE=1 SV=2 P08228 Superoxide dismutase [Cu-Zn] OS=Mus musculus OX=10090 GN=Sod1 PE=1 SV=2 0 3 3 0.5245 0 1 1 1 434.59314 1301.76487 1301.76516 -0.23 -0.0001 0/0 0 0 22525228 HCD 30 MS2 23.41569 900.1 68.883 54.4589 15172 15172 15169 QEplus033719.raw F4 1240.2 732 879.3 679.2 993.7 876.4 332 3.47 1 FALSE 1.14E-05 0.0008161 0.68 -250 65702 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTSEPHTEDK [K].lTSEPHTEDk.[E] N-Term(TMT6plex); K10(TMT6plex) 4 P28658 Ataxin-10 OS=Mus musculus OX=10090 GN=Atxn10 PE=1 SV=2 P28658; Q3TCF4; Q8BWX1; Q3TKP3 Ataxin-10 OS=Mus musculus OX=10090 GN=Atxn10 PE=1 SV=2; Ataxin-10 OS=Mus musculus OX=10090 GN=Atxn10 PE=2 SV=1; Atx10homo_assoc domain-containing protein OS=Mus musculus OX=10090 GN=Atxn10 PE=2 SV=1; Ataxin-10 OS=Mus musculus OX=10090 GN=Atxn10 PE=2 SV=1 0 3 3 0.6726 0 1 1 1 538.96344 1614.87577 1614.87392 1.14 0.00061 0/0 0 0 16645220 HCD 30 MS2 5.269484 1041.9 110 54.4614 15173 15173 15169 QEplus033719.raw F4 1372.7 871.5 1126.4 816.4 1127.4 936.9 363 3.94 1 FALSE 1.14E-05 5.13E-06 1.102 -250 65710 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SALEQMR [K].sALEQMR.[K] N-Term(TMT6plex) 2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4; O70182 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2; Cytoplasmic dynein heavy chain (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1 0 2 2 0.3494 0 1 1 1 532.29285 1063.57842 1063.57675 1.57 0.00084 0/0 0 0 14552365 HCD 30 MS2 12.75346 1015.1 110 54.4639 15174 15174 15169 QEplus033719.raw F4 1161.7 762.1 1115.7 915.3 969.9 1165.9 284 2.49 1 FALSE 0.0005076 0.008055 0.438 -250 65716 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQESPGK [R].iQESPGk.[V] N-Term(TMT6plex); K7(TMT6plex) 3 Q3UK39 DNA replication licensing factor MCM2 OS=Mus musculus OX=10090 GN=Mcm2 PE=2 SV=1 Q3UK39; P97310; Q3UJN1 DNA replication licensing factor MCM2 OS=Mus musculus OX=10090 GN=Mcm2 PE=2 SV=1; DNA replication licensing factor MCM2 OS=Mus musculus OX=10090 GN=Mcm2 PE=1 SV=3; DNA replication licensing factor MCM2 OS=Mus musculus OX=10090 GN=Mcm2 PE=2 SV=1 0 2 2 0.2402 0 1 1 1 608.86969 1216.7321 1216.73016 1.6 0.00097 0/0 0 0 10276116 HCD 30 MS2 24.18311 1104.9 110 54.4664 15175 15175 15169 QEplus033719.raw F4 1134.4 1068.5 1019.9 707.4 1751.8 947.1 415 2.29 1 FALSE 0.003405 0.06608 0.098 -250 65730 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLEGHAEK [K].vLEGHAEk.[E] N-Term(TMT6plex); K8(TMT6plex) 5 P32067 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 P32067; Q3TG93; Q9CYB9; Q8BTU4; F6SXM5 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; HTH La-type RNA-binding domain-containing protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Lupus La protein homolog (Fragment) OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 0 2 2 0.5592 0 1 1 1 670.90015 1340.79302 1340.79382 -0.6 -0.0004 0/0 0 0 5298564.5 HCD 30 MS2 31.56556 465.8 110 54.4715 15177 15177 15169 QEplus033719.raw F4 463.2 338.3 472.9 481 575.2 464.1 277 3.63 1 FALSE 1.14E-05 5.54E-05 0.906 -250 65738 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPGASNLK [K].sPGASNLk.[I] N-Term(TMT6plex); K8(TMT6plex) 8 Q9WTK5 Nuclear factor NF-kappa-B p100 subunit OS=Mus musculus OX=10090 GN=Nfkb2 PE=1 SV=1 Q9WTK5; Q4U105; Q3U5V4; A0A494BAQ2; A0A494B9Y5; Q3ULT8; Q3UV15; Q4U108 Nuclear factor NF-kappa-B p100 subunit OS=Mus musculus OX=10090 GN=Nfkb2 PE=1 SV=1; NF-kB2 splice variant 4 OS=Mus musculus OX=10090 GN=Nfkb2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nfkb2 PE=2 SV=1; Nuclear factor NF-kappa-B p100 subunit OS=Mus musculus OX=10090 GN=Nfkb2 PE=1 SV=1; Nuclear factor NF-kappa-B p100 subunit OS=Mus musculus OX=10090 GN=Nfkb2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nfkb2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nfkb2 PE=2 SV=1; NF-kB2 splice variant 1 OS=Mus musculus OX=10090 GN=Nfkb2 PE=2 SV=1 0 2 2 0.3718 0 1 1 1 616.37323 1231.73918 1231.74106 -1.52 -0.00094 0/0 0 0 4814640.5 HCD 30 MS2 16.55708 562.9 110 54.474 15178 15178 15169 QEplus033719.raw F4 647.1 402.6 567.6 584.6 563.6 612.1 504 2.77 1 FALSE 0.001886 0.03199 0.207 -250 65761 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREEQAEPDGTEVADK [K].qREEQAEPDGTEVADk.[AT] N-Term(TMT6plex); K16(TMT6plex) 11 Q5SX40; P13541; Q5SX39; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; Q3UUB1; B2RWX0; Q8BLW0; I6L963; B1AR69; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 3 3 0.7669 0 1 1 1 754.05432 2260.14841 2260.14574 1.18 0.00089 0/0 0 0 2644548.5 HCD 30 MS2 60.84406 120.7 110 54.4863 15182 15182 15180 QEplus033719.raw F4 127.1 48.5 91.7 207.8 57 192.4 259 5.32 4 FALSE 1.14E-05 6.31E-16 3.335 -250 65768 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLEGHAEK [K].vLEGHAEk.[E] N-Term(TMT6plex); K8(TMT6plex) 5 P32067 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 P32067; Q3TG93; Q9CYB9; Q8BTU4; F6SXM5 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; HTH La-type RNA-binding domain-containing protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Lupus La protein homolog (Fragment) OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 0 3 3 0.4628 0 1 1 1 447.60272 1340.79361 1340.79382 -0.16 -0.00007 0/0 0 0 70799248 HCD 30 MS2 16.90424 577.9 15.887 54.4886 15183 15183 15180 QEplus033719.raw F4 632 484.6 572.9 462.3 809.3 506.5 273 4.43 1 FALSE 1.14E-05 6.73E-08 1.46 -250 65780 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAEDGFRK [R].aAEDGFRk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 Q543N7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pacsin3 PE=1 SV=1 A6PWR1; B1AW91; Q543N7 Protein kinase C and casein kinase II substrate protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Pacsin3 PE=1 SV=1; Protein kinase C and casein kinase II substrate protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Pacsin3 PE=1 SV=8; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pacsin3 PE=1 SV=1 1 3 3 0.4167 0 1 1 1 451.26193 1351.77124 1351.77342 -1.61 -0.00073 0/0 0 0 12502646 HCD 30 MS2 31.3632 959.8 80.752 54.4931 15185 15185 15180 QEplus033719.raw F4 1101.8 603 953.2 1112 748.2 1240.7 415 2.28 1 FALSE 0.001533 0.02306 0.257 -250 65805 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESEQLAK [K].eSEQLAk.[A] N-Term(TMT6plex); K7(TMT6plex) 6 Q80WR0 Nucleoporin 153 OS=Mus musculus OX=10090 GN=Nup153 PE=2 SV=1 Q8R2M9; Q80WR0; E9Q3G8; Q3V3W1; Q80UN3; Q8BRF6 Nup153 protein (Fragment) OS=Mus musculus OX=10090 GN=Nup153 PE=2 SV=1; Nucleoporin 153 OS=Mus musculus OX=10090 GN=Nup153 PE=2 SV=1; Nucleoporin 153 OS=Mus musculus OX=10090 GN=Nup153 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nup153 PE=2 SV=1; Nup153 protein (Fragment) OS=Mus musculus OX=10090 GN=Nup153 PE=2 SV=1; RanBP2-type domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Nup153 PE=2 SV=1 0 2 2 0.1818 0 1 1 1 631.87079 1262.7343 1262.73564 -1.06 -0.00067 0/0 0 0 8190037.5 HCD 30 MS2 54.97868 1004 110 54.5006 15188 15188 15180 QEplus033719.raw F4 1171.9 584.9 800.8 1366.8 966.1 1133.4 426 1.43 1 FALSE 0.001266 0.01719 0.308 -250 65815 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYGEQIDPSTHR [K].eYGEQIDPSTHR.[K] N-Term(TMT6plex) 2 Q9QXT0 Protein canopy homolog 2 OS=Mus musculus OX=10090 GN=Cnpy2 PE=1 SV=1 A0A1W2P729; Q9QXT0 Protein canopy homolog 2 (Fragment) OS=Mus musculus OX=10090 GN=Cnpy2 PE=1 SV=1; Protein canopy homolog 2 OS=Mus musculus OX=10090 GN=Cnpy2 PE=1 SV=1 0 3 3 0.6853 0 1 1 1 554.27521 1660.81107 1660.81283 -1.06 -0.00059 0/0 0 0 6433974 HCD 30 MS2 0 435.7 110 54.5031 15189 15189 15180 QEplus033719.raw F4 530.7 339 427.6 399.1 463.3 454.7 130 3.94 1 FALSE 1.14E-05 2.10E-06 1.176 -250 65833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGDGTITTK [K].dGDGTITTk.[E] N-Term(TMT6plex); K9(TMT6plex) 2 P0DP27 Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1 P0DP27; Q3UKW2 Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=1 SV=1 0 3 3 0.5281 0 1 1 1 455.92502 1365.7605 1365.76258 -1.52 -0.00069 0/0 0 0 7420625.5 HCD 30 MS2 55.11473 679.7 110 54.5154 15193 15193 15191 QEplus033719.raw F4 760.1 582 732.7 516.2 817.1 670 343 2.31 1 FALSE 0.003464 0.06708 0.095 -250 65843 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EILDSR [RK].eILDSR.[GLE] N-Term(TMT6plex) 14 A0A0N4SUX5; P21550 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno2 PE=1 SV=1;Beta-enolase OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=3 D3YVD3; Q4FK59; Q5SX59; A0A0N4SUI6; D3Z6E4; A0A0N4SUX5; A0A0N4SUW8; P21550; Q5SX61; Q545V3; D3Z2S4; Q922A0; Q5SX60; Q3UJ20 Gamma-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno2 PE=1 SV=8; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno3 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=1; Gamma-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno2 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno2 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno2 PE=1 SV=1; Gamma-enolase OS=Mus musculus OX=10090 GN=Eno2 PE=1 SV=1; Beta-enolase OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=3; Beta-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno2 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno2 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno2 PE=2 SV=1; Beta-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno2 PE=2 SV=1 0 2 2 0.1798 0 1 1 1 481.27966 961.55205 961.55158 0.49 0.00024 0/0 0 0 94856304 HCD 30 MS2 26.07087 618.4 12.286 54.5176 15194 15194 15191 QEplus033719.raw F4 752.4 369.1 630.2 719.1 462.7 776.6 200 2.28 2 FALSE 0.002293 0.04493 0.158 -250 65844 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELIDSR [RK].eLIDSR.[GLE] N-Term(TMT6plex) 3 A0A1L1STC6 Nesprin-1 OS=Mus musculus OX=10090 GN=Syne1 PE=1 SV=1 A0A1L1STC6; Q6ZWR6-4; Q6ZWR6 Nesprin-1 OS=Mus musculus OX=10090 GN=Syne1 PE=1 SV=1; Isoform 4 of Nesprin-1 OS=Mus musculus OX=10090 GN=Syne1; Nesprin-1 OS=Mus musculus OX=10090 GN=Syne1 PE=1 SV=2 0 2 2 0.1798 0 1 2 2 481.27966 961.55205 961.55158 0.49 0.00024 0/0 0 0 94856304 HCD 30 MS2 26.07087 618.4 12.286 54.5176 15194 15194 15191 QEplus033719.raw F4 752.4 369.1 630.2 719.1 462.7 776.6 200 2.28 1 FALSE 0.002293 0.04493 0.158 -250 65845 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELLDSR [RK].eLLDSR.[GLE] N-Term(TMT6plex) 4 Q923T7-3; Q5NCB7; Q923T7; B2RR25 Isoform 3 of E3 ubiquitin-protein ligase TRIM7 OS=Mus musculus OX=10090 GN=Trim7; E3 ubiquitin-protein ligase TRIM7 OS=Mus musculus OX=10090 GN=Trim7 PE=4 SV=2; E3 ubiquitin-protein ligase TRIM7 OS=Mus musculus OX=10090 GN=Trim7 PE=2 SV=2; E3 ubiquitin-protein ligase TRIM7 OS=Mus musculus OX=10090 GN=Trim7 PE=2 SV=1 0 2 2 0.1798 0 1 3 3 481.27966 961.55205 961.55158 0.49 0.00024 0/0 0 0 94856304 HCD 30 MS2 26.07087 618.4 12.286 54.5176 15194 15194 15191 QEplus033719.raw F4 752.4 369.1 630.2 719.1 462.7 776.6 200 2.28 3 FALSE 0.002293 0.04493 0.158 -250 65849 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVPGARPCPDYCR [R].gVPGARPcPDYcR.[N] N-Term(TMT6plex); C8(Carbamidomethyl); C12(Carbamidomethyl) 2 Q9QZF2 Glypican-1 OS=Mus musculus OX=10090 GN=Gpc1 PE=1 SV=1 Q3U3U3; Q9QZF2 Glypican-1 (Fragment) OS=Mus musculus OX=10090 GN=Gpc1 PE=2 SV=1; Glypican-1 OS=Mus musculus OX=10090 GN=Gpc1 PE=1 SV=1 0 3 3 0.8037 0 1 1 1 578.6192 1733.84305 1733.84131 1 0.00058 0/0 0 0 19377812 HCD 30 MS2 50.76544 995.7 75.582 54.5199 15195 15195 15191 QEplus033719.raw F4 1035 718.2 1155 975.7 1108.8 981.3 116 3.26 1 FALSE 1.14E-05 0.0002438 0.783 -250 65865 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGVTEGCDPTR [R].vGVTEGcDPTR.[V] N-Term(TMT6plex); C7(Carbamidomethyl) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.6288 0 1 1 1 710.35822 1419.70915 1419.70994 -0.56 -0.0004 0/0 0 0 11033234 HCD 30 MS2 18.50734 499.8 110 54.5269 15198 15198 15191 QEplus033719.raw F4 545.9 226.6 474.4 644.7 279.5 827.6 144 3.61 1 FALSE 1.14E-05 9.84E-10 1.808 -250 65875 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEGVCER [R].lEGVcER.[L] N-Term(TMT6plex); C5(Carbamidomethyl) 4 Q99K41 EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1 Q3UUU0; Q99K41; Q3U254; Q3USG5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; C1q domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1 0 2 2 0.5038 0 1 1 1 546.28973 1091.57219 1091.57166 0.49 0.00027 0/0 0 0 27087176 HCD 30 MS2 25.09997 937.9 58.272 54.5317 15200 15200 15191 QEplus033719.raw F4 1005.8 757 1063.2 962.6 813 1025.9 195 2.64 1 FALSE 0.0003496 0.006819 0.462 -250 65886 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMPEQTGEK [R].sMPEQTGEk.[-] N-Term(TMT6plex); K9(TMT6plex) 3 P62889 60S ribosomal protein L30 OS=Mus musculus OX=10090 GN=Rpl30 PE=1 SV=2 Q5PR15; P62889; A0A2I3BQF4 60S ribosomal protein L30 OS=Mus musculus OX=10090 GN=Rpl30 PE=2 SV=1; 60S ribosomal protein L30 OS=Mus musculus OX=10090 GN=Rpl30 PE=1 SV=2; 60S ribosomal protein L30 OS=Mus musculus OX=10090 GN=Rpl30 PE=1 SV=1 0 2 2 0.5486 0 1 1 1 732.89227 1464.77727 1464.77685 0.29 0.00021 0/0 0 0 15157044 HCD 30 MS2 6.116043 655.7 110 54.5414 15203 15203 15202 QEplus033719.raw F4 640.4 567.5 726.6 572.8 742.9 683.8 326 3.19 1 FALSE 1.14E-05 3.53E-06 1.133 -250 65896 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQGKPVSGQESSQSPYER [K].aQGkPVSGQESSQSPYER.[Q] N-Term(TMT6plex); K4(TMT6plex) 5 Q3UPL0 Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2 S4R1Y8; Q3UPL0; Q3UPL0-2; S4R2A9; S4R256 Protein transport protein Sec31A (Fragment) OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=1; Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2; Isoform 2 of Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a; Protein transport protein Sec31A (Fragment) OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=1; Protein transport protein Sec31A (Fragment) OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=1 0 3 3 0.7968 0 1 1 1 798.42255 2393.25309 2393.24612 2.91 0.00232 0/0 0 0 14003374 HCD 30 MS2 7.567852 406.5 110 54.5439 15204 15204 15202 QEplus033719.raw F4 394.3 418.9 470.8 334.2 454.6 366.1 395 4.43 1 FALSE 1.14E-05 6.31E-16 3.184 -250 65904 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVTDFEHR [K].kVTDFEHR.[I] N-Term(TMT6plex); K1(TMT6plex) 4 Q8C605 ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkp PE=1 SV=1 Q8C8E8; Q8C605; F6YL81; Q9WUA3 "PFK domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Pfkp PE=2 SV=1; ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkp PE=1 SV=1; ATP-dependent 6-phosphofructokinase, platelet type (Fragment) OS=Mus musculus OX=10090 GN=Pfkp PE=1 SV=1; ATP-dependent 6-phosphofructokinase, platelet type OS=Mus musculus OX=10090 GN=Pfkp PE=1 SV=1" 1 4 4 0.5797 0 1 1 1 373.21915 1489.85476 1489.85273 1.36 0.00051 0/0 0 0 11360415 HCD 30 MS2 28.31203 482.8 82.365 54.5461 15205 15205 15202 QEplus033719.raw F4 552.9 413.2 481.6 429.1 592 427.7 486 2.95 1 FALSE 1.14E-05 4.04E-05 0.932 -250 65912 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGEEIDK [K].dGEEIDk.[N] N-Term(TMT6plex); K7(TMT6plex) 5 A0A571BEN1 "Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1" A0A571BEN1; Q6P6L5; F7D574; F6RQD1; D3YU50 "Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1; Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1; Myosin-binding protein C, slow-type (Fragment) OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1; Myosin-binding protein C, slow-type (Fragment) OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1; Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1" 0 2 2 0.3049 0 1 1 1 632.34631 1263.68535 1263.68327 1.65 0.00104 0/0 0 0 8002767.5 HCD 30 MS2 41.79535 1020.5 110 54.5487 15206 15206 15202 QEplus033719.raw F4 1264.4 534.4 722.3 1560.1 895.1 1147 304 2.23 1 FALSE 0.001395 0.02 0.281 -250 65918 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TMVVHEK [R].tMVVHEk.[Q] N-Term(TMT6plex); K7(TMT6plex) 1 P08228 Superoxide dismutase [Cu-Zn] OS=Mus musculus OX=10090 GN=Sod1 PE=1 SV=2 P08228 Superoxide dismutase [Cu-Zn] OS=Mus musculus OX=10090 GN=Sod1 PE=1 SV=2 0 2 2 0.5338 0 1 1 1 651.3866 1301.76592 1301.76516 0.58 0.00038 0/0 0 0 7380572 HCD 30 MS2 37.54452 818.6 110 54.5512 15207 15207 15202 QEplus033719.raw F4 869.1 753.9 823.4 664.8 988.2 811.9 325 3.11 1 FALSE 0.0002019 0.004031 0.526 -250 65929 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPEQLRK [K].ePEQLRk.[L] N-Term(TMT6plex); K7(TMT6plex) 14 Q3UK83; Q5FB19 Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1;Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1 Q8BG05-2; Q3TFB1; Q3UK83; P49312; Q3U7F3; Q6PFA7; P49312-2; Q3TIK8; Q3UZG3; Q5EBP8; Q5FB19; B2RXM2; A2AL12; Q6P6I7 Isoform 2 of Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=2; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Hnrpa3 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Isoform Short of Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; EG627828 protein OS=Mus musculus OX=10090 GN=Gm6793 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1; Hnrpa3 protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1 1 3 3 0.4682 0 1 1 1 453.27795 1357.81931 1357.82037 -0.78 -0.00035 0/0 0 0 16170295 HCD 30 MS2 29.10986 926.5 68.244 54.5557 15209 15209 15202 QEplus033719.raw F4 1319.5 674.3 854.9 640.1 1236.7 833.7 305 2.2 2 FALSE 0.00274 0.05412 0.13 -250 65943 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSAVAISGADSR [R].dSAVAISGADSR.[G] N-Term(TMT6plex) 6 Q4JG03 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1 Q7TMY8-4; Q4JG03; Q7TMY8-3; Q7TMY8; Q7TMY8-2; A2AFQ0 Isoform 4 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; Isoform 3 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=5; Isoform 2 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=1 0 2 2 0.3162 0 1 1 1 689.35718 1377.70708 1377.71714 -7.3 -0.00503 0/0 0 0 8579628 HCD 30 MS2 0 323.1 110 54.5632 15212 15212 15202 QEplus033719.raw F4 325.7 268.8 343.2 258.7 367.5 374.9 220 3.7 1 FALSE 1.14E-05 9.87E-09 1.618 -250 65948 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTGTLDANR [K].vTGTLDANR.[S] N-Term(TMT6plex) 3 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 A0A0G2JDU7; F7BDR1; Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=1; Fascin (Fragment) OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=1; Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 0 2 2 0.6274 0 1 1 1 588.33282 1175.65837 1175.65817 0.18 0.0001 0/0 0 0 17348166 HCD 30 MS2 37.61345 978 83.798 54.5705 15214 15214 15213 QEplus033719.raw F4 1050.4 893.9 1059.2 730.6 1200.4 933.2 334 3.14 1 FALSE 5.44E-05 0.001765 0.61 -250 65965 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VKVEPSHDASK [R].vkVEPSHDASk.[V] N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 1 4 4 0.6904 0 1 1 1 471.78461 1884.1166 1884.11577 0.44 0.00021 0/0 0 0 58115880 HCD 30 MS2 10.83211 555.7 17.033 54.5753 15216 15216 15213 QEplus033719.raw F4 502 729.5 569.7 437.1 735.1 360.6 344 4.78 1 FALSE 1.14E-05 1.66E-05 1.005 -250 65981 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RALADTENLR [K].rALADTENLR.[Q] N-Term(TMT6plex) 2 Q99LP6 "GrpE protein homolog 1, mitochondrial OS=Mus musculus OX=10090 GN=Grpel1 PE=1 SV=1" Q99LP6; Q3UTB8 "GrpE protein homolog 1, mitochondrial OS=Mus musculus OX=10090 GN=Grpel1 PE=1 SV=1; GrpE protein homolog OS=Mus musculus OX=10090 GN=Grpel1 PE=2 SV=1" 1 3 3 0.6356 0 1 1 1 463.26727 1387.78727 1387.78549 1.28 0.00059 0/0 0 0 10604349 HCD 30 MS2 28.67665 554.5 103.006 54.5799 15218 15218 15213 QEplus033719.raw F4 705.3 381 610.8 614.7 480.1 535.1 366 4.72 1 FALSE 1.14E-05 1.30E-09 1.786 -250 65990 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRAEAQQLR [R].lRAEAQQLR.[K] N-Term(TMT6plex) 2 Q61081 Hsp90 co-chaperone Cdc37 OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1 Q61081; A0A1L1STC0 Hsp90 co-chaperone Cdc37 OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1; Hsp90 co-chaperone Cdc37 (Fragment) OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1 1 3 3 0.43 0 1 1 1 438.59985 1313.78501 1313.7851 -0.07 -0.00003 0/0 0 0 10322781 HCD 30 MS2 7.383999 571.3 110 54.5824 15219 15219 15213 QEplus033719.raw F4 573.5 517.7 618.3 437.8 664.8 615.6 326 4 1 FALSE 1.14E-05 4.95E-05 0.915 -250 65997 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AISSSAISR [R].aISSSAISR.[A] N-Term(TMT6plex) 4 Q6NVF9 Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1 H3BKW0; Q6NVF9; H3BJ30; H3BJW3 Cleavage and polyadenylation-specificity factor subunit 6 (Fragment) OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1; Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1; Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1; Cleavage and polyadenylation specificity factor subunit 6 OS=Mus musculus OX=10090 GN=Cpsf6 PE=1 SV=1 0 2 2 0.2989 0 1 1 1 560.83154 1120.65581 1120.65235 3.08 0.00173 0/0 0 0 9910824 HCD 30 MS2 38.59229 900.1 110 54.5849 15220 15220 15213 QEplus033719.raw F4 1269.5 713.4 945.1 748.6 894.6 829.5 284 1.74 1 FALSE 0.002326 0.04628 0.153 -250 66007 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQTPENTPR [K].iQTPENTPR.[L] N-Term(TMT6plex) 3 E9Q2X6 Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1 E9Q2X6; Q8CG47; Q6P7V9 Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1; Structural maintenance of chromosomes protein 4 OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1; Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=2 SV=1 0 2 2 0.4232 0 1 1 1 642.85858 1284.70989 1284.71093 -0.81 -0.00052 0/0 0 0 4070582 HCD 30 MS2 33.6417 470.6 110 54.5899 15222 15222 15213 QEplus033719.raw F4 482.8 441.1 411.8 311.1 757.7 418.9 261 2.41 1 FALSE 0.0016 0.02499 0.244 -250 66022 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APASPAAIR [R].aPASPAAIR.[T] N-Term(TMT6plex) 2 Q6ZQ73 Cullin-associated NEDD8-dissociated protein 2 OS=Mus musculus OX=10090 GN=Cand2 PE=1 SV=2 Q6ZQ73; Q3UM57 Cullin-associated NEDD8-dissociated protein 2 OS=Mus musculus OX=10090 GN=Cand2 PE=1 SV=2; TIP120 domain-containing protein OS=Mus musculus OX=10090 GN=Cand2 PE=2 SV=1 0 2 2 0.5153 0 1 1 1 541.83069 1082.6541 1082.65196 1.98 0.00107 0/0 0 0 10864848 HCD 30 MS2 38.90994 1126 110 54.5995 15225 15225 15224 QEplus033719.raw F4 1272.6 589 1207.8 1397.7 765.3 1523.6 91 2.62 1 FALSE 0.001658 0.02731 0.231 -250 66031 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEDQNEYESR [R].kLEDQNEYESR.[S] N-Term(TMT6plex); K1(TMT6plex) 10 Q5FWX7 Oxysterol-binding protein OS=Mus musculus OX=10090 GN=Osbpl9 PE=1 SV=1 Q5FWX7; A2A8Z1-2; E9Q6C1; A2A8Z1; F6UHR6; A0A0A6YXH3; E9PXZ2; Q8R0G3; A0A1S6GWJ0; Q99LZ2 Oxysterol-binding protein OS=Mus musculus OX=10090 GN=Osbpl9 PE=1 SV=1; Isoform 2 of Oxysterol-binding protein-related protein 9 OS=Mus musculus OX=10090 GN=Osbpl9; Oxysterol-binding protein OS=Mus musculus OX=10090 GN=Osbpl9 PE=1 SV=1; Oxysterol-binding protein-related protein 9 OS=Mus musculus OX=10090 GN=Osbpl9 PE=1 SV=1; Oxysterol-binding protein OS=Mus musculus OX=10090 GN=Osbpl9 PE=1 SV=2; Oxysterol-binding protein OS=Mus musculus OX=10090 GN=Osbpl9 PE=1 SV=1; Oxysterol-binding protein OS=Mus musculus OX=10090 GN=Osbpl9 PE=1 SV=2; Oxysterol-binding protein OS=Mus musculus OX=10090 GN=Osbpl9 PE=2 SV=1; Oxysterol-binding protein OS=Mus musculus OX=10090 GN=Osbpl9 PE=2 SV=1; Osbpl9 protein (Fragment) OS=Mus musculus OX=10090 GN=Osbpl9 PE=2 SV=1 1 3 3 0.6192 0 1 1 1 623.664 1868.97745 1868.97543 1.08 0.00067 0/0 0 0 2680427.75 HCD 30 MS2 26.69387 464.3 110 54.602 15226 15226 15224 QEplus033719.raw F4 475.2 410.2 505.1 385.4 539.3 470.3 311 3.23 1 FALSE 1.14E-05 2.16E-08 1.554 -250 66050 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYSTPDK [R].aYSTPDk.[I] N-Term(TMT6plex); K7(TMT6plex) 4 Q8VCX5 "Calcium uptake protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Micu1 PE=1 SV=1" Q8VCX5; Q8VCX5-3; Q8VCX5-2; E9Q9E0 "Calcium uptake protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Micu1 PE=1 SV=1; Isoform 3 of Calcium uptake protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Micu1; Isoform 2 of Calcium uptake protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Micu1; Calcium uptake protein 1, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Micu1 PE=1 SV=1" 0 2 2 0.3769 0 1 1 1 620.35339 1239.69951 1239.69852 0.8 0.00049 0/0 0 0 9007952 HCD 30 MS2 13.16929 899.5 110 54.607 15228 15228 15224 QEplus033719.raw F4 925.4 676.7 899 941.1 1005.2 949.7 284 2.6 1 FALSE 0.001702 0.0281 0.226 -250 66069 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPEEEDQQAFR [K].sPEEEDQQAFR.[L] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.8356 0 1 1 1 782.87622 1564.74516 1564.74408 0.69 0.00054 0/0 0 0 6706129 HCD 30 MS2 0 293 110 54.612 15230 15230 15224 QEplus033719.raw F4 343.6 184.3 316.2 258 288.9 367.2 70 3.65 1 FALSE 1.14E-05 3.51E-08 1.514 -250 66084 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGGAGPGGTGGGWK [R].rGGAGPGGTGGGWk.[L] N-Term(TMT6plex); K14(TMT6plex) 3 F8WHM5 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 F8WHM5; Q61543; E9PWD8 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 1 3 3 0.7242 0 1 1 1 558.31476 1672.92972 1672.92836 0.82 0.00045 0/0 0 0 17903058 HCD 30 MS2 49.00629 888.7 82.525 54.6168 15232 15232 15224 QEplus033719.raw F4 796.3 858.2 1037.7 685.3 1031.6 923.3 385 5.91 1 FALSE 1.14E-05 4.55E-15 2.821 -250 66091 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVVEEAENGR [K].eVVEEAENGR.[D] N-Term(TMT6plex) 8 Q8C2T3 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1 Q8C2T3; P26350; A0A087WP98; A0A087WQN2; Q3U8X6; A0A087WPN6; Q3U6E4; Q3UA54 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Prothymosin alpha OS=Mus musculus OX=10090 GN=Ptma PE=1 SV=2; Prothymosin alpha OS=Mus musculus OX=10090 GN=Ptma PE=1 SV=1; Prothymosin alpha (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Prothymosin alpha OS=Mus musculus OX=10090 GN=Ptma PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1 0 2 2 0.7364 0 1 1 1 680.84882 1360.69036 1360.69059 -0.17 -0.00012 0/0 0 0 12289655 HCD 30 MS2 12.79558 662.6 110 54.6193 15233 15233 15224 QEplus033719.raw F4 686.9 768.8 659.5 421.6 874.6 564.1 150 3.87 1 FALSE 1.14E-05 4.81E-07 1.298 -250 66105 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETAQAIK [R].eTAQAIk.[GT] N-Term(TMT6plex); K7(TMT6plex) 5 Q80V08 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1 Q80V08; Q9CPR4; Q6ZWZ7; Q6PHZ1; Q505B1 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=1 SV=3; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=1 SV=1; 60S ribosomal protein L17 OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1; 60S ribosomal protein L17 (Fragment) OS=Mus musculus OX=10090 GN=Rpl17 PE=2 SV=1 0 3 3 0.1648 0 1 1 1 406.92035 1218.74649 1218.74581 0.56 0.00023 0/0 0 0 8317038 HCD 30 MS2 62.88165 623 77.803 54.629 15236 15236 15235 QEplus033719.raw F4 689.3 477.5 633.7 521.7 737.4 678.5 568 2.61 1 FALSE 0.0008183 0.01127 0.384 -250 66106 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETAQALK [R].eTAQALk.[GT] N-Term(TMT6plex); K7(TMT6plex) 8 A0A1L1SQ51 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1 Q71LX4; Q68FD6; A0A1L1SRI1; A0A1L1SQ51; B2RY15; Q8CHG4; Q8CDM9; E9PUM4 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=3; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; MKIAA0320 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1 0 3 3 0.1648 0 1 2 2 406.92035 1218.74649 1218.74581 0.56 0.00023 0/0 0 0 8317038 HCD 30 MS2 62.88165 623 77.803 54.629 15236 15236 15235 QEplus033719.raw F4 689.3 477.5 633.7 521.7 737.4 678.5 568 2.61 1 FALSE 0.0008183 0.01127 0.384 -250 66113 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSGSPYGGGYGSGGGSGGYGSR [R].sSGSPYGGGYGSGGGSGGYGSR.[R] N-Term(TMT6plex) 9 Q5FB19 Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1 Q8BG05-2; Q5U3M2; Q58E39; Q3UZG3; Q5FB19; B2RXM2; A2AL12; Q6P6I7; A2AL13 Isoform 2 of Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3; Hnrpa3 protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Hnrpa3 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; EG627828 protein OS=Mus musculus OX=10090 GN=Gm6793 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1; Hnrpa3 protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A3 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1 0 3 3 0.8907 0 1 1 1 713.98993 2139.95523 2139.9529 1.09 0.00078 0/0 0 0 12378712 HCD 30 MS2 0 100.9 110 54.6316 15237 15237 15235 QEplus033719.raw F4 100.2 107.7 123 82.1 108.7 83.7 34 7.87 1 FALSE 1.14E-05 6.31E-16 3.675 -250 66121 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQGTALEK [K].sQGTALEk.[Y] N-Term(TMT6plex); K8(TMT6plex) 3 P14152 "Malate dehydrogenase, cytoplasmic OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=3" P14152; A0A5F8MPN8; B1ATQ3 "Malate dehydrogenase, cytoplasmic OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=3; Malate dehydrogenase OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=1; Cytosolic malate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=8" 0 2 2 0.3207 0 1 1 1 646.38489 1291.7625 1291.76219 0.24 0.00016 0/0 0 0 88654840 HCD 30 MS2 3.811034 1016.5 18.442 54.6339 15238 15238 15235 QEplus033719.raw F4 1128 731.9 943.1 1153.4 1086.6 1055.8 510 2.37 1 FALSE 5.44E-05 0.001735 0.612 -250 66130 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGVHIK [R].aGVHIk.[L] N-Term(TMT6plex); K6(TMT6plex) 2 Q04447 Creatine kinase B-type OS=Mus musculus OX=10090 GN=Ckb PE=1 SV=1 Q545N7; Q04447 Creatine kinase OS=Mus musculus OX=10090 GN=Ckmt1 PE=1 SV=1; Creatine kinase B-type OS=Mus musculus OX=10090 GN=Ckb PE=1 SV=1 0 3 3 0.1083 0 1 1 1 361.5748 1082.70984 1082.70864 1.11 0.0004 0/0 0 0 73980000 HCD 30 MS2 20.42088 569.6 14.7 54.6361 15239 15239 15235 QEplus033719.raw F4 645.5 194.1 638 903.8 277.5 758.9 35 2.77 1 FALSE 0.003389 0.06535 0.1 -250 66140 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVAHIQTVQHK [K].tVAHIQTVQHk.[L] N-Term(TMT6plex); K11(TMT6plex) 2 P51174 "Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=2" A0A0R4J083; P51174 "Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=1; Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=2" 0 3 3 0.3906 0 1 1 1 574.01453 1720.02903 1720.02701 1.17 0.00067 0/0 0 0 18198408 HCD 30 MS2 25.84706 855 72.367 54.6384 15240 15240 15235 QEplus033719.raw F4 1011.3 591.4 899.3 967.5 721.7 938.8 434 5.12 1 FALSE 1.14E-05 2.37E-11 2.116 -250 66146 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTGASGSFK [K].gTGASGSFk.[L] N-Term(TMT6plex); K9(TMT6plex) 9 P43274; Q1WWK3; P15864 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2;Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1;Histone H1.2 OS=Mus musculus OX=10090 GN=H1-2 PE=1 SV=2 P43274; Q1WWK3; I7HFT9; P43276; Q3UXH2; Q3U292; P15864; Q07133; P43277 "Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2; Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1; H1.6 linker histone, cluster member OS=Mus musculus OX=10090 GN=H1f6 PE=1 SV=1; Histone H1.5 OS=Mus musculus OX=10090 GN=H1-5 PE=1 SV=2; H15 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=H1f2 PE=2 SV=1; H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f3 PE=2 SV=1; Histone H1.2 OS=Mus musculus OX=10090 GN=H1-2 PE=1 SV=2; Histone H1t OS=Mus musculus OX=10090 GN=H1-6 PE=1 SV=4; Histone H1.3 OS=Mus musculus OX=10090 GN=H1-3 PE=1 SV=2" 0 2 2 0.5315 0 1 1 1 635.36444 1269.72161 1269.72032 1.01 0.00064 0/0 0 0 15260134 HCD 30 MS2 0 991.6 110 54.6409 15241 15241 15235 QEplus033719.raw F4 933.1 977.5 1028 707.6 1530.1 773.4 313 3.33 3 FALSE 1.14E-05 1.89E-06 1.185 -250 66156 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISYSQEADDR [R].iSYSQEADDR.[V] N-Term(TMT6plex) 5 A2AL50 Alkylglycerone-phosphate synthase OS=Mus musculus OX=10090 GN=Agps PE=1 SV=1 A2AL50; Q8BKC4; Q8C0I1; A2AL49; H3BKN2 "Alkylglycerone-phosphate synthase OS=Mus musculus OX=10090 GN=Agps PE=1 SV=1; Alkylglycerone-phosphate synthase OS=Mus musculus OX=10090 GN=Agps PE=2 SV=1; Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Mus musculus OX=10090 GN=Agps PE=1 SV=1; Alkylglycerone-phosphate synthase OS=Mus musculus OX=10090 GN=Agps PE=1 SV=1; Alkylglycerone-phosphate synthase OS=Mus musculus OX=10090 GN=Agps PE=1 SV=1" 0 2 2 0.7374 0 1 1 1 706.84717 1412.68706 1412.6855 1.1 0.00078 0/0 0 0 7258941.5 HCD 30 MS2 14.11831 367.6 110 54.6434 15242 15242 15235 QEplus033719.raw F4 381.2 334.6 385.7 303.6 443.7 356.8 94 3.77 1 FALSE 1.14E-05 3.73E-08 1.509 -250 66168 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTLSQSETK [K].dTLSQSETk.[T] N-Term(TMT6plex); K9(TMT6plex) 5 Q7M739 Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1 Q8K2T9; Q7M739; F6ZDS4; F6RX08; Q3UVR0 Tpr protein OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1 0 2 2 0.5339 0 1 1 1 733.91089 1466.8145 1466.81026 2.89 0.00212 0/0 0 0 11157038 HCD 30 MS2 21.93795 603.2 110 54.6484 15244 15244 15235 QEplus033719.raw F4 600.1 568.9 649.9 480.5 740 579.7 397 3.54 1 FALSE 1.14E-05 2.85E-06 1.151 -250 66183 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSGSPYGGGYGSGGGSGGYGSR [R].sSGSPYGGGYGSGGGSGGYGSR.[R] N-Term(TMT6plex) 9 Q5FB19 Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1 Q8BG05-2; Q5U3M2; Q58E39; Q3UZG3; Q5FB19; B2RXM2; A2AL12; Q6P6I7; A2AL13 Isoform 2 of Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3; Hnrpa3 protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Hnrpa3 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; EG627828 protein OS=Mus musculus OX=10090 GN=Gm6793 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1; Hnrpa3 protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A3 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1 0 2 2 0.9 0 1 1 1 1070.4823 2139.95732 2139.9529 2.06 0.00221 0/0 0 0 8009963.5 HCD 30 MS2 0 176.6 110 54.6583 15247 15247 15246 QEplus033719.raw F4 156.9 225.6 222 155.4 181.9 117.8 34 6.1 1 FALSE 1.14E-05 6.31E-16 4.931 -250 66192 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NANPNEYEK [K].nANPNEYEk.[I] N-Term(TMT6plex); K9(TMT6plex) 4 G0YZM8; A0A571BEN1 "MyBP-C slow (Fragment) OS=Mus musculus OX=10090 GN=Mybpc1 PE=2 SV=1;Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1" G0YZM8; A0A571BEN1; Q6P6L5; D3YU50 "MyBP-C slow (Fragment) OS=Mus musculus OX=10090 GN=Mybpc1 PE=2 SV=1; Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1; Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1; Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1" 0 2 2 0.6278 0 1 1 1 768.90601 1536.80474 1536.80584 -0.72 -0.00055 0/0 0 0 4602495.5 HCD 30 MS2 0 355.3 110 54.6608 15248 15248 15246 QEplus033719.raw F4 429.6 101.5 197.5 784.9 134.1 484.4 310 3.6 2 FALSE 1.14E-05 3.01E-06 1.147 -250 66197 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMMAACDPR [K].nMMAAcDPR.[H] N-Term(TMT6plex); C6(Carbamidomethyl) 14 Q7TMM9; P99024; P68372; Q9CWF2; Q3UMM1 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1;Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=1 SV=1 Q7TMM9; Q9D6F9; Q9CVR0; Q9ERD7; Q9CUN8; Q80ZV2; Q3U9U3; Q9CRT0; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2; Q3UMM1 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Tubulin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-3 chain OS=Mus musculus OX=10090 GN=Tubb3 PE=1 SV=1; Tubulin_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb6 PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=2 SV=1; Tubulin_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1; Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=1 SV=1 0 2 2 0.8765 0 1 1 1 647.79938 1294.59148 1294.59036 0.86 0.00056 0/0 0 0 68724544 HCD 30 MS2 36.56219 717 16.89 54.6631 15249 15249 15246 QEplus033719.raw F4 731.1 595.8 757.3 655.9 830.8 730.9 16 2.43 5 FALSE 0.003397 0.06561 0.099 -250 66207 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVAPIER [K].tAVAPIER.[V] N-Term(TMT6plex) 4 Q8BVI9; P51881 ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a4 PE=2 SV=1;ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3 B2RTC8; Q8BVI9; P48962; P51881 ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a31 PE=1 SV=1; ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a4 PE=2 SV=1; ADP/ATP translocase 1 OS=Mus musculus OX=10090 GN=Slc25a4 PE=1 SV=4; ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3 0 2 2 0.313 0 1 1 1 543.33069 1085.6541 1085.65162 2.28 0.00124 0/0 0 0 15240725 HCD 30 MS2 12.57068 1195.6 110 54.6679 15251 15251 15246 QEplus033719.raw F4 1346.9 887.8 1188 1107.8 1289 1353.9 250 2.62 2 FALSE 1.14E-05 0.000141 0.829 -250 66218 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RALADTENLR [K].rALADTENLR.[Q] N-Term(TMT6plex) 2 Q99LP6 "GrpE protein homolog 1, mitochondrial OS=Mus musculus OX=10090 GN=Grpel1 PE=1 SV=1" Q99LP6; Q3UTB8 "GrpE protein homolog 1, mitochondrial OS=Mus musculus OX=10090 GN=Grpel1 PE=1 SV=1; GrpE protein homolog OS=Mus musculus OX=10090 GN=Grpel1 PE=2 SV=1" 1 2 2 0.5382 0 1 1 1 694.39624 1387.7852 1387.78549 -0.21 -0.00014 0/0 0 0 4839691.5 HCD 30 MS2 26.79728 127.9 110 54.6726 15253 15253 15246 QEplus033719.raw F4 121 116.8 135.3 101.2 164.3 128.5 369 2.88 1 FALSE 1.14E-05 5.13E-06 1.102 -250 66227 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRAEAQQLR [R].lRAEAQQLR.[K] N-Term(TMT6plex) 2 Q61081 Hsp90 co-chaperone Cdc37 OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1 Q61081; A0A1L1STC0 Hsp90 co-chaperone Cdc37 OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1; Hsp90 co-chaperone Cdc37 (Fragment) OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1 1 2 2 0.2958 0 1 1 1 657.39722 1313.78716 1313.7851 1.57 0.00103 0/0 0 0 6416712.5 HCD 30 MS2 0 222.2 110 54.6751 15254 15254 15246 QEplus033719.raw F4 201.3 209.4 254.1 175.8 260.3 232.3 317 2.13 1 FALSE 0.0003496 0.006822 0.462 -250 66233 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQQQEPTCEPSPK [R].kQQQEPTcEPSPk.[R] N-Term(TMT6plex); K1(TMT6plex); C8(Carbamidomethyl); K13(TMT6plex) 2 P52927 High mobility group protein HMGI-C OS=Mus musculus OX=10090 GN=Hmga2 PE=1 SV=1 P52927; Q6NSP9 High mobility group protein HMGI-C OS=Mus musculus OX=10090 GN=Hmga2 PE=1 SV=1; High mobility group protein HMGI-C OS=Mus musculus OX=10090 GN=Hmga2 PE=1 SV=1 1 3 3 0.686 0 1 1 1 748.74823 2244.23014 2244.22613 1.79 0.00134 0/0 0 0 4271628 HCD 30 MS2 12.88291 294.7 110 54.6776 15255 15255 15246 QEplus033719.raw F4 264.4 405.7 360.9 205.3 256.9 274.7 475 5.51 1 FALSE 1.14E-05 6.53E-15 2.792 -250 66240 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVSTPSEAGSQDSGDGAVGSR [K].sVSTPSEAGSQDSGDGAVGSR.[RT] N-Term(TMT6plex) 9 A2BFF8 Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1 A2BFF8; D6Q0F6; Q3TPJ8; D6Q0F5; D6Q0F7; A2BFF9; A2BFF5; A2BFF7; Q3UDA2 Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1; Cytoplasmic dynein intermediate chain 2 isoform 2.2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=2 SV=1; Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1; Cytoplasmic dynein intermediate chain 2 isoform 2.1 OS=Mus musculus OX=10090 GN=Dync1i2 PE=2 SV=1; Cytoplasmic dynein intermediate chain 2 isoform 2.5 OS=Mus musculus OX=10090 GN=Dync1i2 PE=2 SV=1; Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1; Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1; Dynein cytoplasmic 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1i2 PE=2 SV=1 0 2 2 0.8688 0 1 1 1 1090.5199 2180.03252 2180.02646 2.78 0.00303 0/0 0 0 3837585.75 HCD 30 MS2 0 90.9 110 54.6802 15256 15256 15246 QEplus033719.raw F4 89.4 77.3 99.7 80 105.9 93.3 97 5.87 1 FALSE 1.14E-05 6.31E-16 4.331 -250 66246 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIREEAEK [K].dIREEAEk.[Y] N-Term(TMT6plex); K8(TMT6plex) 4 Q9DCD8 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1 Q3TEL1; Q9DCD8; O70435; E0CX62 Uncharacterized protein OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1; Proteasome subunit alpha type-3 OS=Mus musculus OX=10090 GN=Psma3 PE=1 SV=3; Proteasome subunit alpha type-3 OS=Mus musculus OX=10090 GN=Psma3 PE=1 SV=2 1 3 3 0.3357 0 1 1 1 483.27713 1447.81684 1447.81568 0.8 0.00039 0/0 0 0 95435616 HCD 30 MS2 20.50434 833.5 13.502 54.6922 15260 15260 15257 QEplus033719.raw F4 884.3 732.4 925.7 675.8 914.4 868.5 459 2.86 1 FALSE 0.0005076 0.008057 0.438 -250 66254 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIGAAAK [R].sIGAAAk.[S] N-Term(TMT6plex); K7(TMT6plex) 5 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q8C6R3; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 0 2 2 0.1271 0 1 1 1 538.34766 1075.68804 1075.68757 0.44 0.00024 0/0 0 0 23272576 HCD 30 MS2 61.90182 1278.8 50.212 54.6968 15262 15262 15257 QEplus033719.raw F4 1592 1093.3 1452.4 1053.5 1297.1 1184.7 76 1.81 1 FALSE 0.001134 0.01508 0.332 -250 66264 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FKYDDAERR [K].fkYDDAERR.[F] N-Term(TMT6plex); K2(TMT6plex) 14 Q91VK2; Q80T06 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1;Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1 Q8BW50; Q91VK2; P57776-2; D3Z7N2; F6ZFU0; Q80T06; A0A0R4J1E2; D3YY68; E9QN08; A0A0R4J1L2; D3YZT9; P57776-3; P57776; D3YUQ9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Eef1d PE=2 SV=1; Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 2 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 3 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=3; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=8 2 4 4 0.1769 0 1 1 1 415.23218 1657.90688 1657.90623 0.4 0.00016 0/0 0 0 20269620 HCD 30 MS2 43.99725 931 38.06 54.699 15263 15263 15257 QEplus033719.raw F4 821.7 924.3 1170.9 828.3 784.2 1056.8 341 2.94 2 FALSE 0.004832 0.08455 0.049 -250 66271 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STESLQANVQR [K].sTESLQANVQR.[L] N-Term(TMT6plex) 2 P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 Q5RKP3; P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=2 SV=1; 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 0 2 2 0.7 0 1 1 1 731.3974 1461.78752 1461.78589 1.12 0.00082 0/0 0 0 13996482 HCD 30 MS2 9.772755 491.4 110 54.7015 15264 15264 15257 QEplus033719.raw F4 487.9 444.2 569.6 417.7 511.9 517.1 345 4.4 1 FALSE 1.14E-05 4.68E-09 1.68 -250 66276 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADIDSYR [K].aDIDSYR.[I] N-Term(TMT6plex) 7 Q80YX1 Tenascin OS=Mus musculus OX=10090 GN=Tnc PE=1 SV=1 Q80YX1-4; Q80YX1; Q148T4; Q148T5; Q80YX1-2; Q80YX1-3; Q80YX1-5 Isoform 4 of Tenascin OS=Mus musculus OX=10090 GN=Tnc; Tenascin OS=Mus musculus OX=10090 GN=Tnc PE=1 SV=1; Tnc protein OS=Mus musculus OX=10090 GN=Tnc PE=2 SV=1; Tnc protein OS=Mus musculus OX=10090 GN=Tnc PE=2 SV=1; Isoform 2 of Tenascin OS=Mus musculus OX=10090 GN=Tnc; Isoform 3 of Tenascin OS=Mus musculus OX=10090 GN=Tnc; Isoform 5 of Tenascin OS=Mus musculus OX=10090 GN=Tnc 0 2 2 0.5189 0 1 1 1 534.77997 1068.55266 1068.5523 0.33 0.00018 0/0 0 0 5568312.5 HCD 30 MS2 53.45757 1139.8 110 54.704 15265 15265 15257 QEplus033719.raw F4 1277.4 779 1071.9 1277.1 1210.1 1223.6 96 2.12 1 FALSE 0.001632 0.02667 0.234 -250 66284 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLVEQQQDR [R].vLVEQQQDR.[A] N-Term(TMT6plex) 1 A2ADY9 Protein DDI1 homolog 2 OS=Mus musculus OX=10090 GN=Ddi2 PE=1 SV=1 A2ADY9 Protein DDI1 homolog 2 OS=Mus musculus OX=10090 GN=Ddi2 PE=1 SV=1 0 2 2 0.472 0 1 1 1 672.37878 1343.75029 1343.74804 1.67 0.00112 0/0 0 0 3930676.5 HCD 30 MS2 0 360.9 110 54.7065 15266 15266 15257 QEplus033719.raw F4 400.6 287.9 391.4 287.6 390.9 406.7 340 3.39 1 FALSE 1.14E-05 1.27E-06 1.217 -250 66293 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQQQQQFLAR [R].qQQQQQFLAR.[E] N-Term(TMT6plex) 2 D3YVW2 Golgi integral membrane protein 4 OS=Mus musculus OX=10090 GN=Golim4 PE=1 SV=1 D3YVW2; Q8BXA1 Golgi integral membrane protein 4 OS=Mus musculus OX=10090 GN=Golim4 PE=1 SV=1; Golgi integral membrane protein 4 OS=Mus musculus OX=10090 GN=Golim4 PE=1 SV=1 0 2 2 0.3907 0 1 1 1 752.41522 1503.82317 1503.82294 0.15 0.00011 0/0 0 0 3402142.25 HCD 30 MS2 0 203.3 110 54.7091 15267 15267 15257 QEplus033719.raw F4 200.7 179.1 202.6 158.6 278.1 200.8 357 3.43 1 FALSE 1.14E-05 1.79E-07 1.379 -250 66302 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MMGEQVAR [R].mMGEQVAR.[V] N-Term(TMT6plex) 2 Q91YR9 Prostaglandin reductase 1 OS=Mus musculus OX=10090 GN=Ptgr1 PE=1 SV=2 Q91YR9; Q4FJY5 Prostaglandin reductase 1 OS=Mus musculus OX=10090 GN=Ptgr1 PE=1 SV=2; 15-oxoprostaglandin 13-reductase OS=Mus musculus OX=10090 GN=Ptgr1 PE=2 SV=1 0 2 2 0.5153 0 1 1 1 575.7995 1150.59172 1150.59102 0.61 0.00035 0/0 0 0 22014410 HCD 30 MS2 0 1118.4 110 54.7164 15269 15269 15268 QEplus033719.raw F4 1111.2 1151.5 1141.3 794.5 1554.5 957.4 184 2.95 1 FALSE 1.14E-05 0.000285 0.77 -250 66310 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVTPGKK [K].aAVTPGkk.[A] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 7 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; P09405; Q3TGR3; Q3TT41; A0A087WRM5; Q8CE30; Q9CT46 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 1 3 3 0.3661 0 1 1 1 486.99176 1458.96073 1458.96111 -0.26 -0.00013 0/0 0 0 11116345 HCD 30 MS2 57.72114 1362.4 97.295 54.7187 15270 15270 15268 QEplus033719.raw F4 2342.8 915.3 1364.9 993.7 1067.7 1489.9 162 1.83 1 FALSE 0.003084 0.06005 0.114 -250 66319 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SELTGK [K].sELTGk.[F] N-Term(TMT6plex); K6(TMT6plex) 1 P48036 Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 P48036 Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 0 2 2 0.2657 0 1 1 2 546.83765 1092.66802 1092.6665 1.39 0.00076 0/0 0 0 20805420 HCD 30 MS2 37.17469 1062.4 50.021 54.7209 15271 15271 15268 QEplus033719.raw F4 1544.7 815.5 1274.1 855.4 868.3 1016.6 193 2.07 1 FALSE 0.003817 0.07233 0.082 -250 66328 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SKEPAYIR [R].skEPAYIR.[C] N-Term(TMT6plex); K2(TMT6plex) 4 Q9WTI7-3 Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c Q9WTI7; Q9WTI7-3; Q9WTI7-2; Q9WTI7-4 Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c PE=1 SV=2; Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Isoform 2 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Isoform 4 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c 1 3 3 0.3293 0 1 1 1 474.6225 1421.85294 1421.85167 0.89 0.00042 0/0 0 0 18143318 HCD 30 MS2 20.89093 1197.4 110 54.7234 15272 15272 15268 QEplus033719.raw F4 1134.4 1178.4 1398.3 1002.1 1180.4 1290.9 404 2.49 1 FALSE 0.0006383 0.009773 0.408 -250 66337 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFQNVAK [K].rFQNVAk.[E] N-Term(TMT6plex); K7(TMT6plex) 6 Q3UBU0 HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1 Q3TUD6; Q3UBU0; Q91V38; Q8CCY5; F7C312; P08113 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Heat shock protein 90, beta (Grp94), member 1 OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Endoplasmin (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=1; Endoplasmin OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=2" 1 3 3 0.2724 0 1 1 1 440.94305 1320.81461 1320.81523 -0.47 -0.00021 0/0 0 0 12089362 HCD 30 MS2 24.13692 992.9 94.513 54.7257 15273 15273 15268 QEplus033719.raw F4 1124.8 824.5 1013.2 741.6 1252.1 1001 300 2.57 1 FALSE 0.0006216 0.009161 0.418 -250 66356 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYQELER [R].nYQELER.[I] N-Term(TMT6plex) 1 Q8VHC3 Selenoprotein M OS=Mus musculus OX=10090 GN=Selenom PE=1 SV=3 Q8VHC3 Selenoprotein M OS=Mus musculus OX=10090 GN=Selenom PE=1 SV=3 0 2 2 0.1868 0 1 1 1 590.81232 1180.61736 1180.61597 1.18 0.00069 0/0 0 0 2543610.25 HCD 30 MS2 42.73753 507.6 110 54.7382 15278 15278 15268 QEplus033719.raw F4 497.8 387.8 529.9 467 580.7 582.4 190 1.82 1 FALSE 0.001456 0.02093 0.273 -250 66363 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HKIPVK [K].hkIPVk.[Y] N-Term(TMT6plex); K2(TMT6plex); K6(TMT6plex) 2 P04247 Myoglobin OS=Mus musculus OX=10090 GN=Mb PE=1 SV=3 P04247; A0A2R8W6F8 Myoglobin OS=Mus musculus OX=10090 GN=Mb PE=1 SV=3; Myoglobin OS=Mus musculus OX=10090 GN=Mb PE=1 SV=1 1 4 4 0.2837 0 1 1 1 352.99606 1408.96242 1408.96072 1.21 0.00043 0/0 0 0 14860005 HCD 30 MS2 10.32135 492.1 57.419 54.7455 15280 15280 15279 QEplus033719.raw F4 788.8 62.8 212.2 1332 101.5 455.3 57 2.08 1 FALSE 0.003182 0.0622 0.108 -250 66371 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVDIQNK [K].rVDIQNk.[R] N-Term(TMT6plex); K7(TMT6plex) 2 P42669 Transcriptional activator protein Pur-alpha OS=Mus musculus OX=10090 GN=Pura PE=1 SV=1 P42669; Q8C6E9 Transcriptional activator protein Pur-alpha OS=Mus musculus OX=10090 GN=Pura PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pura PE=2 SV=1 1 3 3 0.2989 0 1 1 1 444.27872 1330.8216 1330.8207 0.67 0.0003 0/0 0 0 21222356 HCD 30 MS2 56.29622 678.1 42.361 54.7503 15282 15282 15279 QEplus033719.raw F4 741.4 478.4 684.4 679.8 763.2 721.5 533 2.71 1 FALSE 0.0006294 0.009562 0.412 -250 66381 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGPALGEGERK [R].aGPALGEGERk.[A] N-Term(TMT6plex); K11(TMT6plex) 6 Q99MR6 Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1 Q99MR6-3; Q99MR6; Q99MR6-4; A0A0G2JDF1; A0A0G2JDN3; Q99MR6-2 Isoform C of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1; Isoform D of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Serrate RNA effector molecule homolog (Fragment) OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1; Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1; Isoform B of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt 1 3 3 0.5297 0 1 1 1 514.97198 1542.9014 1542.90041 0.64 0.00033 0/0 0 0 18506282 HCD 30 MS2 16.26678 1124 93.66 54.7525 15283 15283 15279 QEplus033719.raw F4 1159.2 1025.9 1270.1 801.2 1368.1 1119.7 426 3.53 1 FALSE 1.14E-05 3.47E-09 1.704 -250 66387 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FKYDDAERR [K].fkYDDAERR.[F] N-Term(TMT6plex); K2(TMT6plex) 14 Q91VK2; Q80T06 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1;Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1 Q8BW50; Q91VK2; P57776-2; D3Z7N2; F6ZFU0; Q80T06; A0A0R4J1E2; D3YY68; E9QN08; A0A0R4J1L2; D3YZT9; P57776-3; P57776; D3YUQ9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Eef1d PE=2 SV=1; Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 2 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 3 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=3; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=8 2 3 3 0.5038 0 1 1 1 553.30786 1657.90903 1657.90623 1.69 0.00094 0/0 0 0 12090734 HCD 30 MS2 10.45162 1090.4 99.662 54.7549 15284 15284 15279 QEplus033719.raw F4 1085 985.9 1285.1 971.8 925.7 1289 338 3.93 2 FALSE 1.14E-05 0.0004363 0.734 -250 66402 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FGVQTDR [K].fGVQTDR.[Q] N-Term(TMT6plex) 3 Q60598 Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2 Q8BNA5; Q60598; Q921L6 SH3 domain-containing protein OS=Mus musculus OX=10090 GN=Cttn PE=2 SV=1; Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2; Cttn protein OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=1 0 2 2 0.119 0 1 1 1 526.29181 1051.57634 1051.57337 2.82 0.00148 0/0 0 0 9974185 HCD 30 MS2 51.81375 1360.4 88.167 54.7594 15286 15286 15279 QEplus033719.raw F4 1626.4 1118 1515.5 1179.8 1397.1 1325.7 194 2.52 1 FALSE 0.000108 0.003072 0.556 -250 66411 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGEQEAK [R].lGEQEAk.[R] N-Term(TMT6plex); K7(TMT6plex) 1 Q60960 Importin subunit alpha-5 OS=Mus musculus OX=10090 GN=Kpna1 PE=1 SV=2 Q60960 Importin subunit alpha-5 OS=Mus musculus OX=10090 GN=Kpna1 PE=1 SV=2 0 2 2 0.2461 0 1 1 1 616.86578 1232.72429 1232.72507 -0.63 -0.00039 0/0 0 0 5743799 HCD 30 MS2 33.52095 791.5 110 54.7619 15287 15287 15279 QEplus033719.raw F4 937.9 539.9 780 830.7 845.3 815.2 484 2.56 1 FALSE 0.0001603 0.003551 0.54 -250 66425 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGGPISFSSSR [R].rGGPISFSSSR.[S] N-Term(TMT6plex) 6 Q5SV64 Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1 Q80T68; Q5SV64; Q3UH59; Q6PB65; Q4KMN4; Q61879 MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 1 3 3 0.627 0 1 1 1 460.59198 1379.76139 1379.75928 1.53 0.0007 0/0 0 0 7779101.5 HCD 30 MS2 36.89825 455.4 110 54.7666 15289 15289 15279 QEplus033719.raw F4 499.4 371.8 488.5 321.5 561.8 489.6 398 4.29 1 FALSE 1.14E-05 3.36E-08 1.517 -250 66445 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YNTYMR [K].yNTYMR.[N] N-Term(TMT6plex) 5 Q3THW7 Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1 Q3THW7; Q8BTX5; Q5M9L0; Q3TII2; Q3TIK5 Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1 0 2 2 0.6409 0 1 1 1 538.77393 1076.54057 1076.53963 0.88 0.00047 0/0 0 0 24441740 HCD 30 MS2 63.95415 826.3 26.864 54.7809 15294 15294 15290 QEplus033719.raw F4 852.5 714.8 988.1 671.9 928.8 802 105 1.81 1 FALSE 0.009266 0.1707 -0.109 -250 66465 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQPEHIISEGR [R].aQPEHIISEGR.[G] N-Term(TMT6plex) 1 Q99J99 3-mercaptopyruvate sulfurtransferase OS=Mus musculus OX=10090 GN=Mpst PE=1 SV=4 Q99J99 3-mercaptopyruvate sulfurtransferase OS=Mus musculus OX=10090 GN=Mpst PE=1 SV=4 0 3 3 0.5231 0 1 1 1 489.26843 1465.79074 1465.79606 -3.62 -0.00177 0/0 0 0 47487048 HCD 30 MS2 55.83817 656.6 32.573 54.7905 15298 15298 15290 QEplus033719.raw F4 699.2 323.1 603 652.6 760.5 901.1 363 2.81 1 FALSE 0.002956 0.05768 0.12 -250 66472 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MLPSTSR [R].mLPSTSR.[R] N-Term(TMT6plex) 4 Q3ULJ5 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 Q3ULJ5; Q3U5M8; P14685; Q8BK46 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus OX=10090 GN=Psmd3 PE=1 SV=3; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 0 2 2 0.1713 0 1 1 1 510.78912 1020.57097 1020.57093 0.04 0.00002 0/0 0 0 17529540 HCD 30 MS2 48.91315 905 50.864 54.7928 15299 15299 15290 QEplus033719.raw F4 1336.5 661.3 959.1 681.7 714.8 1076.6 261 2.16 1 FALSE 0.0005556 0.008387 0.432 -250 66479 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLDHCNIVR [R].kLDHcNIVR.[L] N-Term(TMT6plex); K1(TMT6plex); C5(Carbamidomethyl) 4 E9QAQ5 Glycogen synthase kinase-3 beta OS=Mus musculus OX=10090 GN=Gsk3b PE=1 SV=1 Q2NL51; D3Z7E5; E9QAQ5; Q9WV60 Glycogen synthase kinase-3 alpha OS=Mus musculus OX=10090 GN=Gsk3a PE=1 SV=2; [Tau protein] kinase OS=Mus musculus OX=10090 GN=Gsk3a PE=1 SV=1; Glycogen synthase kinase-3 beta OS=Mus musculus OX=10090 GN=Gsk3b PE=1 SV=1; Glycogen synthase kinase-3 beta OS=Mus musculus OX=10090 GN=Gsk3b PE=1 SV=2 1 4 4 0.5412 0 1 1 1 403.98972 1612.93703 1612.93575 0.79 0.00032 0/0 0 0 11539327 HCD 30 MS2 51.73511 610.6 63.112 54.795 15300 15300 15290 QEplus033719.raw F4 589.2 445.7 637.1 535.6 562.1 894.1 384 2.79 1 FALSE 0.001851 0.0314 0.21 -250 66496 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGSGVILR [R].qGSGVILR.[Q] N-Term(TMT6plex) 8 Q64010 Adapter molecule crk OS=Mus musculus OX=10090 GN=Crk PE=1 SV=1 Q91VM1; Q5ND50; Q920I1; F7D232; Q8JZR2; Q64010; Q8BPE7; Q64010-2 V-crk sarcoma virus CT10 oncogene homolog (Avian) OS=Mus musculus OX=10090 GN=Crk PE=2 SV=1; Adapter molecule crk OS=Mus musculus OX=10090 GN=Crk PE=1 SV=2; CT-10 related kinase 3 OS=Mus musculus OX=10090 GN=Crk PE=2 SV=1; Adapter molecule crk (Fragment) OS=Mus musculus OX=10090 GN=Crk PE=1 SV=1; Adapter molecule crk OS=Mus musculus OX=10090 GN=Crk PE=1 SV=1; Adapter molecule crk OS=Mus musculus OX=10090 GN=Crk PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Crk PE=2 SV=1; Isoform Crk-I of Adapter molecule crk OS=Mus musculus OX=10090 GN=Crk 0 2 2 0.3111 0 1 1 1 529.82928 1058.65129 1058.65196 -0.63 -0.00033 0/0 0 0 8352737.5 HCD 30 MS2 31.19798 875.7 110 54.8048 15303 15303 15301 QEplus033719.raw F4 1118.7 648.7 873.2 726.2 990.1 897.2 167 2.25 1 FALSE 0.0003496 0.006786 0.462 -250 66527 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNTSPISGR [R].vNTSPISGR.[E] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.5222 0 1 1 1 580.33569 1159.66411 1159.66325 0.74 0.00043 0/0 0 0 7801560 HCD 30 MS2 19.00408 830.1 110 54.8145 15307 15307 15301 QEplus033719.raw F4 986.2 372.1 675.4 1225.2 602.1 1119.4 304 2.7 2 FALSE 0.0003408 0.006549 0.467 -250 66536 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEAGIVSCTAR [K].nEAGIVScTAR.[L] N-Term(TMT6plex); C8(Carbamidomethyl) 9 A0A1W2P7G1; Q9ET54-6; Q9ET54 Myopalladin OS=Mus musculus OX=10090 GN=Mypn PE=4 SV=1;Isoform 6 of Palladin OS=Mus musculus OX=10090 GN=Palld;Palladin OS=Mus musculus OX=10090 GN=Palld PE=1 SV=2 Q9ET54-3; Q9ET54-2; A0A1W2P7G1; Q9ET54-6; Q9ET54; Q9ET54-5; K0BWC3; Q9ET54-4; Q5DTJ9 Isoform 3 of Palladin OS=Mus musculus OX=10090 GN=Palld; Isoform 2 of Palladin OS=Mus musculus OX=10090 GN=Palld; Myopalladin OS=Mus musculus OX=10090 GN=Mypn PE=4 SV=1; Isoform 6 of Palladin OS=Mus musculus OX=10090 GN=Palld; Palladin OS=Mus musculus OX=10090 GN=Palld PE=1 SV=2; Isoform 5 of Palladin OS=Mus musculus OX=10090 GN=Palld; Palladin isoform OS=Mus musculus OX=10090 GN=Palld PE=2 SV=1; Isoform 4 of Palladin OS=Mus musculus OX=10090 GN=Palld; Myopalladin OS=Mus musculus OX=10090 GN=Mypn PE=1 SV=2 0 2 2 0.4941 0 1 1 1 703.86658 1406.72588 1406.72593 -0.04 -0.00003 0/0 0 0 4836740 HCD 30 MS2 0 468.6 110 54.817 15308 15308 15301 QEplus033719.raw F4 483.3 428.3 483.8 363 569.8 483.6 225 3.4 3 FALSE 1.14E-05 1.07E-08 1.611 -250 66556 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIREEAEK [K].dIREEAEk.[Y] N-Term(TMT6plex); K8(TMT6plex) 4 Q9DCD8 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1 Q3TEL1; Q9DCD8; O70435; E0CX62 Uncharacterized protein OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1; Proteasome subunit alpha type-3 OS=Mus musculus OX=10090 GN=Psma3 PE=1 SV=3; Proteasome subunit alpha type-3 OS=Mus musculus OX=10090 GN=Psma3 PE=1 SV=2 1 2 2 0.3041 0 1 1 1 724.41193 1447.81658 1447.81568 0.62 0.00045 0/0 0 0 10516727 HCD 30 MS2 7.50564 303.7 110 54.8221 15310 15310 15301 QEplus033719.raw F4 330.5 226.7 300.3 341.1 270.4 353.1 460 1.71 1 FALSE 0.004206 0.07703 0.069 -250 66564 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQQQEPTCEPSPK [R].kQQQEPTcEPSPk.[R] N-Term(TMT6plex); K1(TMT6plex); C8(Carbamidomethyl); K13(TMT6plex) 2 P52927 High mobility group protein HMGI-C OS=Mus musculus OX=10090 GN=Hmga2 PE=1 SV=1 P52927; Q6NSP9 High mobility group protein HMGI-C OS=Mus musculus OX=10090 GN=Hmga2 PE=1 SV=1; High mobility group protein HMGI-C OS=Mus musculus OX=10090 GN=Hmga2 PE=1 SV=1 1 4 4 0.3519 0 1 1 1 561.81378 2244.2333 2244.22613 3.19 0.00179 0/0 0 0 7164123.5 HCD 30 MS2 86.93929 582.1 97.663 54.8244 15311 15311 15301 QEplus033719.raw F4 622.2 520.3 674.8 519.9 548.9 606.5 478 2.33 1 FALSE 0.0008445 0.01162 0.379 -250 66580 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAYGSVNK [R].gAYGSVNk.[M] N-Term(TMT6plex); K8(TMT6plex) 2 Q543X6 Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Map2k4 PE=1 SV=1 B1ATL6; Q543X6 Dual-specificity mitogen-activated protein kinase kinase 4 (Fragment) OS=Mus musculus OX=10090 GN=Map2k4 PE=1 SV=1; Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Map2k4 PE=1 SV=1 0 2 2 0.3474 0 1 1 1 627.36743 1253.72759 1253.72541 1.74 0.00109 0/0 0 0 5311989 HCD 30 MS2 0 761.3 110 54.8342 15314 15314 15312 QEplus033719.raw F4 795.3 543.9 729 795.4 838.3 865.9 309 2.85 1 FALSE 1.14E-05 0.0002477 0.782 -250 66589 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STESLQANVQR [K].sTESLQANVQR.[L] N-Term(TMT6plex) 2 P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 Q5RKP3; P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=2 SV=1; 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 0 3 3 0.6992 0 1 1 1 487.93387 1461.78705 1461.78589 0.8 0.00039 0/0 0 0 61402860 HCD 30 MS2 10.96283 386.9 28.613 54.8364 15315 15315 15312 QEplus033719.raw F4 496.1 308.8 408.2 284.8 399.4 424.2 348 5.02 1 FALSE 1.14E-05 6.27E-06 1.086 -250 66620 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVALAVGGR [R].hVALAVGGR.[E] N-Term(TMT6plex) 2 Q9CQ48 NudC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nudcd2 PE=1 SV=1 E0CYQ2; Q9CQ48 NudC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nudcd2 PE=1 SV=1; NudC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nudcd2 PE=1 SV=1 0 3 3 0.5572 0 1 1 1 370.23297 1108.68436 1108.67884 4.98 0.00184 0/0 0 0 9685763 HCD 30 MS2 54.29375 566.5 79.781 54.8457 15319 15319 15312 QEplus033719.raw F4 1061.9 360.6 501.5 225.9 577.9 671 117 3.32 1 FALSE 1.14E-05 0.0001207 0.841 -250 66630 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETTMTSSTQIR [R].eTTMTSSTQIR.[R] N-Term(TMT6plex) 10 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; Q8BUC9; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; Q8BIH3; E9Q8N1; Q8BUJ6 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.6639 0 1 1 1 742.38654 1483.76579 1483.76237 2.31 0.00171 0/0 0 0 4937178 HCD 30 MS2 0 243.4 110 54.8482 15320 15320 15312 QEplus033719.raw F4 277.6 67.4 226.3 406.2 85.6 397.3 189 3.57 2 FALSE 1.14E-05 2.04E-09 1.748 -250 66649 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAAEQDVEK [K].eAAEQDVEk.[K] N-Term(TMT6plex); K9(TMT6plex) 1 P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 0 2 2 0.5097 0 1 1 1 738.89929 1476.79131 1476.79461 -2.24 -0.00165 0/0 0 0 13299103 HCD 30 MS2 22.63869 669.1 110 54.8606 15324 15324 15323 QEplus033719.raw F4 614.5 552.9 707.2 554.6 792.5 793 324 3.61 1 FALSE 1.14E-05 4.26E-06 1.118 -250 66656 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTPTQSLR [R].vTPTQSLR.[S] N-Term(TMT6plex) 6 Q921D5 DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1 Q921D5; Q9D077; P49717; Q8C1Z0; Q76NI2; Q3UA65 DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1; DNA replication licensing factor MCM4 OS=Mus musculus OX=10090 GN=Mcm4 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1; Mcm4(Cdc21) protein (Fragment) OS=Mus musculus OX=10090 GN=Mcm4(cdc21) PE=4 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1 0 2 2 0.2466 0 1 1 1 565.84186 1130.67644 1130.67309 2.96 0.00168 0/0 0 0 20731746 HCD 30 MS2 35.81528 1068.8 62.631 54.8628 15325 15325 15323 QEplus033719.raw F4 1169 872.3 1066.2 800.9 1479.1 1025.3 319 2.19 1 FALSE 0.002869 0.05657 0.123 -250 66666 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APGFGDNRK [K].aPGFGDNRk.[N] N-Term(TMT6plex); K9(TMT6plex) 1 P63038 "60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" P63038 "60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" 1 3 3 0.5431 0 1 1 1 473.94223 1419.81214 1419.81087 0.89 0.00042 0/0 0 0 32474204 HCD 30 MS2 51.24902 1042.4 54.182 54.8651 15326 15326 15323 QEplus033719.raw F4 1135.4 969.6 1168 883.8 981.6 1116.1 434 2.32 1 FALSE 0.001429 0.02055 0.276 -250 66673 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIADHCPDSACK [R].tIADHcPDSAck.[Q] N-Term(TMT6plex); C6(Carbamidomethyl); C11(Carbamidomethyl); K12(TMT6plex) 2 Q545R0 "Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1" Q3TGQ3; Q545R0 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctnna1 PE=2 SV=1; Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1" 0 3 3 0.7473 0 1 1 1 611.6394 1832.90366 1832.90352 0.07 0.00004 0/0 0 0 16463377 HCD 30 MS2 43.10217 976.7 91.723 54.8674 15327 15327 15323 QEplus033719.raw F4 989 763.7 1095.6 913.8 1069.1 1028.9 157 3.76 1 FALSE 1.14E-05 2.01E-06 1.18 -250 66680 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MTADGRLPADQR [R].mTADGRLPADQR.[R] N-Term(TMT6plex) 3 Q5SX53 Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc25a11 PE=1 SV=1 Q5SX53; Q5SX46; Q9CTC7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc25a11 PE=1 SV=1; Mitochondrial 2-oxoglutarate/malate carrier protein (Fragment) OS=Mus musculus OX=10090 GN=Slc25a11 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Slc25a11 PE=2 SV=1 1 3 3 0.5859 0 1 1 1 520.6106 1559.81723 1559.81614 0.7 0.00036 0/0 0 0 17082034 HCD 30 MS2 18.68713 758.5 110 54.8699 15328 15328 15323 QEplus033719.raw F4 800.7 611.3 824.7 773 707.7 833.5 282 3.26 1 FALSE 1.14E-05 2.58E-07 1.349 -250 66685 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGTDESK [R].lGTDESk.[F] N-Term(TMT6plex); K7(TMT6plex) 2 P97384 Annexin A11 OS=Mus musculus OX=10090 GN=Anxa11 PE=1 SV=2 P97384; D3Z7U0 Annexin A11 OS=Mus musculus OX=10090 GN=Anxa11 PE=1 SV=2; Annexin OS=Mus musculus OX=10090 GN=Anxa11 PE=1 SV=1 0 2 2 0.3069 0 1 1 1 604.35083 1207.69438 1207.69344 0.78 0.00047 0/0 0 0 14403033 HCD 30 MS2 52.52481 792 40.01 54.8721 15329 15329 15323 QEplus033719.raw F4 999.5 495.5 834.6 915.6 640 866.8 346 2.02 1 FALSE 0.001108 0.01442 0.34 -250 66695 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TWVQAR [K].tWVQAR.[L] N-Term(TMT6plex) 2 E9Q6R7 Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 O08614; E9Q6R7 Cytoskeletal protein OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 0 2 2 0.2304 0 1 1 1 495.29065 989.57402 989.57298 1.05 0.00052 0/0 0 0 7547344.5 HCD 30 MS2 60.52175 1083 110 54.8746 15330 15330 15323 QEplus033719.raw F4 1536.1 780.1 1210.7 863.4 948.1 1159.8 270 1.91 1 FALSE 0.002526 0.04979 0.143 -250 66703 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQAPGQPGASQWGSR [K].nQAPGQPGASQWGSR.[V] N-Term(TMT6plex) 4 Q9JII5 DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2 Q9JII5; Q9JII5-2; Q3UGB5; Q3U878 DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2; Isoform 2 of DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1; DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dazap1 PE=2 SV=1 0 2 2 0.8315 0 1 1 1 885.44788 1769.88848 1769.88806 0.23 0.00021 0/0 0 0 6458469 HCD 30 MS2 0 215.5 110 54.8772 15331 15331 15323 QEplus033719.raw F4 229.2 213.7 233.4 151.5 264.9 200.2 199 4.63 1 FALSE 1.14E-05 3.74E-15 2.838 -250 66707 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DCMRELDDTR [K].dcMRELDDTR.[A] N-Term(TMT6plex); C2(Carbamidomethyl) 4 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q811J9; Q7TQJ6; Q8VDD5; Q99JJ3 Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 3 3 0.5903 0 1 1 1 513.9082 1539.71006 1539.70929 0.5 0.00025 0/0 0 0 18427412 HCD 30 MS2 14.17239 692.2 110 54.8822 15333 15333 15323 QEplus033719.raw F4 757.1 690.2 776.8 413.2 954.6 561.2 47 2.88 1 FALSE 0.0001603 0.003616 0.538 -250 66714 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQAPGQPGASQWGSR [K].nQAPGQPGASQWGSR.[V] N-Term(TMT6plex) 4 Q9JII5 DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2 Q9JII5; Q9JII5-2; Q3UGB5; Q3U878 DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2; Isoform 2 of DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1; DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dazap1 PE=2 SV=1 0 3 3 0.7459 0 1 1 1 590.63422 1769.8881 1769.88806 0.02 0.00001 0/0 0 0 16930222 HCD 30 MS2 9.654911 406.8 110 54.8895 15335 15335 15334 QEplus033719.raw F4 402.1 321.1 374.3 377.3 471.6 494.2 197 4.88 1 FALSE 1.14E-05 2.17E-10 1.933 -250 66725 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEEEAAQK [R].vEEEAAQk.[N] N-Term(TMT6plex); K8(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 2 2 0.5247 0 1 1 1 681.3877 1361.76811 1361.76767 0.33 0.00022 0/0 0 0 108324816 HCD 30 MS2 43.17682 898.1 16.088 54.8942 15337 15337 15334 QEplus033719.raw F4 1034.3 904 971.4 640.9 1086.8 751.3 474 3.64 1 FALSE 1.14E-05 0.0001393 0.83 -250 66739 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQEELETATR [R].kQEELETATR.[F] N-Term(TMT6plex); K1(TMT6plex) 1 Q64521 "Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=2" Q64521 "Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=2" 1 3 3 0.6078 0 1 1 1 554.98602 1662.94352 1662.94267 0.51 0.00028 0/0 0 0 26627066 HCD 30 MS2 27.88242 1066.2 66.893 54.8987 15339 15339 15334 QEplus033719.raw F4 1013.4 1100.3 1209.4 886.2 1094 1093.9 440 2.83 1 FALSE 1.14E-05 1.43E-06 1.208 -250 66748 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AECSAEQCYK [K].aEcSAEQcYk.[V] N-Term(TMT6plex); C3(Carbamidomethyl); C8(Carbamidomethyl); K10(TMT6plex) 4 Q921S3 Malic enzyme OS=Mus musculus OX=10090 GN=Me1 PE=2 SV=1 Q3TQP6; Q921S3; P06801; Q99LF5 Malic enzyme OS=Mus musculus OX=10090 GN=Me1 PE=1 SV=1; Malic enzyme OS=Mus musculus OX=10090 GN=Me1 PE=2 SV=1; NADP-dependent malic enzyme OS=Mus musculus OX=10090 GN=Me1 PE=1 SV=2; Me1 protein OS=Mus musculus OX=10090 GN=Me1 PE=2 SV=1 0 3 3 0.8076 0 1 1 1 568.60962 1703.8143 1703.81331 0.58 0.00033 0/0 0 0 13712696 HCD 30 MS2 33.84655 880.3 110 54.9012 15340 15340 15334 QEplus033719.raw F4 1061.9 652.9 966.5 832.4 868.6 899.6 68 3.43 1 FALSE 1.14E-05 2.59E-06 1.159 -250 66755 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QNPDGCLK [K].qNPDGcLk.[C] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.6712 0 1 1 1 695.38245 1389.75762 1389.75606 1.12 0.00078 0/0 0 0 7797256 HCD 30 MS2 0 629.8 110 54.9038 15341 15341 15334 QEplus033719.raw F4 646.6 584.1 810.3 593.6 467.5 676.5 323 2.95 2 FALSE 5.44E-05 0.002475 0.578 -250 66762 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AECSAEQCYK [K].aEcSAEQcYk.[V] N-Term(TMT6plex); C3(Carbamidomethyl); C8(Carbamidomethyl); K10(TMT6plex) 4 Q921S3 Malic enzyme OS=Mus musculus OX=10090 GN=Me1 PE=2 SV=1 Q3TQP6; Q921S3; P06801; Q99LF5 Malic enzyme OS=Mus musculus OX=10090 GN=Me1 PE=1 SV=1; Malic enzyme OS=Mus musculus OX=10090 GN=Me1 PE=2 SV=1; NADP-dependent malic enzyme OS=Mus musculus OX=10090 GN=Me1 PE=1 SV=2; Me1 protein OS=Mus musculus OX=10090 GN=Me1 PE=2 SV=1 0 2 2 0.8393 0 1 1 1 852.41113 1703.81499 1703.81331 0.98 0.00084 0/0 0 0 6650884.5 HCD 30 MS2 0 360.2 110 54.9063 15342 15342 15334 QEplus033719.raw F4 363.1 354.8 376 278.1 467 322.4 66 4.73 1 FALSE 1.14E-05 6.79E-08 1.459 -250 66766 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQVGPEDPK [K].sQVGPEDPk.[SGA] N-Term(TMT6plex); K9(TMT6plex) 5 Q80UU6 Opioid growth factor receptor OS=Mus musculus OX=10090 GN=Ogfr PE=2 SV=1 Q80UU6; Q3UF10; Q99PG2-2; Q8CF06; Q99PG2 Opioid growth factor receptor OS=Mus musculus OX=10090 GN=Ogfr PE=2 SV=1; OGFr_N domain-containing protein OS=Mus musculus OX=10090 GN=Ogfr PE=2 SV=1; Isoform 2 of Opioid growth factor receptor OS=Mus musculus OX=10090 GN=Ogfr; OGFr_N domain-containing protein OS=Mus musculus OX=10090 GN=Ogfr PE=2 SV=1; Opioid growth factor receptor OS=Mus musculus OX=10090 GN=Ogfr PE=1 SV=1 0 2 2 0.4277 0 1 1 1 707.90051 1414.79375 1414.79422 -0.33 -0.00023 0/0 0 0 5927004 HCD 30 MS2 0 424.6 110 54.9088 15343 15343 15334 QEplus033719.raw F4 455.8 380.9 466.8 307 493.9 443.2 350 3.32 1 FALSE 1.14E-05 0.0001459 0.826 -250 66775 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENETLIQR [R].eNETLIQR.[R] N-Term(TMT6plex) 1 Q8JZM7 Parafibromin OS=Mus musculus OX=10090 GN=Cdc73 PE=1 SV=1 Q8JZM7 Parafibromin OS=Mus musculus OX=10090 GN=Cdc73 PE=1 SV=1 0 2 2 0.156 0 1 1 1 616.34546 1231.68364 1231.68438 -0.6 -0.00037 0/0 0 0 4512488 HCD 30 MS2 54.15754 793.2 110 54.9113 15344 15344 15334 QEplus033719.raw F4 857.4 567.8 819.8 788.4 818.1 907.4 373 2.18 1 FALSE 0.001248 0.01695 0.31 -250 66784 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGDTYERPK [K].vGDTYERPk.[D] N-Term(TMT6plex); K9(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; B9EHT6; A0A087WR50; Q3UGY5; Q4KL80; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.6246 0 1 1 1 508.29269 1522.86353 1522.86296 0.37 0.00019 0/0 0 0 33601612 HCD 30 MS2 16.75229 838.7 46.942 54.9186 15346 15346 15345 QEplus033719.raw F4 818.4 757.5 998.2 992.9 627.3 838.1 469 3.09 3 FALSE 1.14E-05 1.22E-05 1.031 -250 66788 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGETTPDK [K].vGETTPDk.[L] N-Term(TMT6plex); K8(TMT6plex) 2 Q9D6J6 "NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv2 PE=1 SV=2" Q9D6J6-2; Q9D6J6 "Isoform 2 of NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv2; NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv2 PE=1 SV=2" 0 2 2 0.5 0 1 1 1 652.87677 1304.74626 1304.7462 0.05 0.00003 0/0 0 0 23848084 HCD 30 MS2 6.814389 1090.8 110 54.9234 15348 15348 15345 QEplus033719.raw F4 1226.6 734.3 1043 1242.6 1019.6 1278.5 418 2.68 1 FALSE 0.0002419 0.004849 0.505 -250 66798 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TESPAEGKEQEEK [K].tESPAEGkEQEEk.[S] N-Term(TMT6plex); K8(TMT6plex); K13(TMT6plex) 9 Q6ZQ61 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1 Q6ZQ61; Q4FJT0; A0A494B9X1; Q3TTX0; A0A494BAZ7; Q3UFN8; A0A494BAD4; Q3TZN1; Q5BL18 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matr3 protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Small nucleolar RNA host gene 4 (Fragment) OS=Mus musculus OX=10090 GN=Snhg4 PE=4 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin-3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin-3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin 3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1 1 3 3 0.5531 0 1 1 1 717.05859 2149.16123 2149.15915 0.97 0.00069 0/0 0 0 6167107 HCD 30 MS2 29.12106 605.9 110 54.9259 15349 15349 15345 QEplus033719.raw F4 619.4 531.4 683.1 540.9 611.4 649.2 494 3.2 1 FALSE 1.14E-05 0.0001392 0.83 -250 66804 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TCESLGAGGYR [R].tcESLGAGGYR.[C] N-Term(TMT6plex); C2(Carbamidomethyl) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.756 0 1 1 1 700.34631 1399.68535 1399.68373 1.16 0.00081 0/0 0 0 8183393 HCD 30 MS2 38.40657 654.3 110 54.9284 15350 15350 15345 QEplus033719.raw F4 631.8 619.3 866.3 620.6 624.7 563 86 4.18 2 FALSE 1.14E-05 7.45E-08 1.452 -250 66813 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDEVQVVR [K].dDEVQVVR.[G] N-Term(TMT6plex) 3 Q4FZH2 Ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1 Q3U7N1; B1ARA3; Q4FZH2 KOW domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; 60S ribosomal protein L26 (Fragment) OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1; Ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1 0 2 2 0.236 0 1 1 1 594.82367 1188.64006 1188.64218 -1.78 -0.00106 0/0 0 0 6135359.5 HCD 30 MS2 62.07088 850.5 110 54.9309 15351 15351 15345 QEplus033719.raw F4 813.2 752 939.6 721 1016.2 860.8 229 1.78 1 FALSE 0.001744 0.02987 0.217 -250 66821 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVTQEEGQQLAR [R].qVTQEEGQQLAR.[Q] N-Term(TMT6plex) 2 P62071 Ras-related protein R-Ras2 OS=Mus musculus OX=10090 GN=Rras2 PE=1 SV=1 P62071; Q9CTF6 Ras-related protein R-Ras2 OS=Mus musculus OX=10090 GN=Rras2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rras2 PE=2 SV=1 0 2 2 0.6751 0 1 1 1 808.43341 1615.85954 1615.86011 -0.35 -0.00028 0/0 0 0 4685237.5 HCD 30 MS2 0 245.7 110 54.9334 15352 15352 15345 QEplus033719.raw F4 242 196 279.3 231.9 251.8 273.5 309 3.97 1 FALSE 1.14E-05 3.48E-10 1.894 -250 66837 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTPPTAATPVR [R].tTPPTAATPVR.[L] N-Term(TMT6plex) 10 P11276; A0A087WSN6 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1 Q3TCF1; P11276; Q3UHL6; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; A0A087WSN6 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1 0 2 2 0.5336 0 1 1 1 670.8902 1340.77312 1340.77353 -0.31 -0.00021 0/0 0 0 7918511 HCD 30 MS2 9.952081 469.4 110 54.9385 15354 15354 15345 QEplus033719.raw F4 436.7 406.1 497 627.8 368.1 480.4 311 2.98 2 FALSE 1.14E-05 2.36E-05 0.976 -250 66853 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YTAQQFR [R].yTAQQFR.[N] N-Term(TMT6plex) 2 Q545H3 Mitochondrial import inner membrane translocase subunit TIM17 OS=Mus musculus OX=10090 GN=Timm17b PE=1 SV=1 Q545H3; Q3UBR8 Mitochondrial import inner membrane translocase subunit TIM17 OS=Mus musculus OX=10090 GN=Timm17b PE=1 SV=1; Mitochondrial import inner membrane translocase subunit TIM17 OS=Mus musculus OX=10090 GN=Timm17b PE=2 SV=1 0 2 2 0.3619 0 1 1 1 571.81226 1142.61724 1142.61557 1.45 0.00083 0/0 0 0 3081579.25 HCD 30 MS2 0 545 110 54.9483 15357 15357 15356 QEplus033719.raw F4 554.3 431.4 593 556.2 531.2 604 143 2.1 1 FALSE 0.002056 0.03695 0.186 -250 66860 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGSPNVESAAK [K].gGSPNVESAAk.[L] N-Term(TMT6plex); K11(TMT6plex) 4 Q8CI11 Guanine nucleotide-binding protein-like 3 OS=Mus musculus OX=10090 GN=Gnl3 PE=1 SV=2 A0A2I3BR32; Q8CI11-2; Q8CI11; Q3TK27 Guanine nucleotide-binding protein-like 3 (Fragment) OS=Mus musculus OX=10090 GN=Gnl3 PE=1 SV=1; Isoform 2 of Guanine nucleotide-binding protein-like 3 OS=Mus musculus OX=10090 GN=Gnl3; Guanine nucleotide-binding protein-like 3 OS=Mus musculus OX=10090 GN=Gnl3 PE=1 SV=2; Guanine nucleotide-binding protein-like 3 OS=Mus musculus OX=10090 GN=Gnl3 PE=2 SV=1 0 2 2 0.5893 0 1 1 1 737.92029 1474.8333 1474.82658 4.56 0.00336 0/0 0 0 3290299.25 HCD 30 MS2 22.12228 351.3 110 54.9508 15358 15358 15356 QEplus033719.raw F4 336.6 325.4 407.6 276.8 379.5 381.6 420 3.92 1 FALSE 1.14E-05 4.21E-08 1.499 -250 66867 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEEEAAQK [R].vEEEAAQk.[N] N-Term(TMT6plex); K8(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 3 3 0.5778 0 1 1 1 454.59418 1361.76798 1361.76767 0.23 0.0001 0/0 0 0 63116040 HCD 30 MS2 19.5646 438.1 16.17 54.9531 15359 15359 15356 QEplus033719.raw F4 476.1 375 474.1 353.2 560.6 389.7 471 3.15 1 FALSE 5.44E-05 0.001912 0.603 -250 66898 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLKPSTPR [K].dLkPSTPR.[S] N-Term(TMT6plex); K3(TMT6plex) 7 Q5SQB7 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1 Q5SQB7; Q8BSZ3; Q5BL09; Q5U438; Q9DAY9; Q5SQB5; Q3U536 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Npm1 protein OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1 0 3 3 0.4674 0 1 1 1 457.9502 1371.83603 1371.83602 0.01 0 0/0 0 0 14043951 HCD 30 MS2 46.52428 1012 65.715 54.9621 15363 15363 15356 QEplus033719.raw F4 1032.4 975.8 1129.4 701.5 1109.6 1123 270 2.61 1 FALSE 0.00971 0.1887 -0.125 -250 66906 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QNPDGCLK [K].qNPDGcLk.[C] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 3 3 0.3645 0 1 1 1 463.92331 1389.75537 1389.75606 -0.49 -0.00023 0/0 0 0 11735818 HCD 30 MS2 42.13655 868.1 88.297 54.9643 15364 15364 15356 QEplus033719.raw F4 1457.7 694.1 890.5 571.1 697 898 339 3.1 2 FALSE 0.001248 0.0169 0.311 -250 66912 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVDQPLSVR [R].hVDQPLSVR.[C] N-Term(TMT6plex) 7 P05622 Platelet-derived growth factor receptor beta OS=Mus musculus OX=10090 GN=Pdgfrb PE=1 SV=2 P05622; Q3TZ27; Q003I5; Q7TMR8; P05622-2; Q3UYC9; E9QN12 Platelet-derived growth factor receptor beta OS=Mus musculus OX=10090 GN=Pdgfrb PE=1 SV=2; Receptor protein-tyrosine kinase (Fragment) OS=Mus musculus OX=10090 GN=Pdgfrb PE=2 SV=1; Receptor protein-tyrosine kinase OS=Mus musculus OX=10090 GN=Pdgfrb PE=2 SV=1; Platelet-derived growth factor receptor beta OS=Mus musculus OX=10090 GN=Pdgfrb PE=2 SV=1; Isoform 2 of Platelet-derived growth factor receptor beta OS=Mus musculus OX=10090 GN=Pdgfrb; Platelet-derived growth factor receptor beta OS=Mus musculus OX=10090 GN=Pdgfrb PE=2 SV=1; Platelet-derived growth factor receptor beta OS=Mus musculus OX=10090 GN=Pdgfrb PE=1 SV=1 0 3 3 0.6503 0 1 1 1 427.24924 1279.73316 1279.732 0.9 0.00039 0/0 0 0 10872172 HCD 30 MS2 38.78708 431.5 110 54.9668 15365 15365 15356 QEplus033719.raw F4 468.9 316.8 457.4 342.9 419.3 583.9 476 3.26 1 FALSE 1.14E-05 2.47E-05 0.973 -250 66942 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEERAELSEGK [R].aEERAELSEGk.[C] N-Term(TMT6plex); K11(TMT6plex) 11 G5E8R1 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 E9Q455; G5E8R1; Q8BSH3; E9Q452; F8WID5; E9Q454; G5E8R0; Q564G1; B7ZNL3; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 1 3 3 0.5361 0 1 1 1 559.64587 1676.92307 1676.92193 0.68 0.00038 0/0 0 0 48046608 HCD 30 MS2 28.55722 771.4 30.922 54.9815 15370 15370 15367 QEplus033719.raw F4 795.7 646.3 888.6 603.7 883.4 810.6 420 2.63 1 FALSE 1.14E-05 0.0002537 0.779 -250 66956 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAVPPGADK [R].sAVPPGADk.[K] N-Term(TMT6plex); K9(TMT6plex) 3 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" P63325; A0A338P7K4; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 0 2 2 0.2694 0 1 1 1 650.38696 1299.76665 1299.76727 -0.48 -0.00031 0/0 0 0 15287613 HCD 30 MS2 73.69766 997.6 110 54.9862 15372 15372 15367 QEplus033719.raw F4 957.4 823.6 1062.6 845.2 1182.5 1114.3 332 1.93 2 FALSE 0.0002218 0.004632 0.51 -250 66964 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APGFGDNRK [K].aPGFGDNRk.[N] N-Term(TMT6plex); K9(TMT6plex) 1 P63038 "60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" P63038 "60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" 1 2 2 0.5274 0 1 1 1 710.40906 1419.81084 1419.81087 -0.02 -0.00001 0/0 0 0 9184873 HCD 30 MS2 32.05612 453.7 110 54.9887 15373 15373 15367 QEplus033719.raw F4 468.9 359.9 492.6 400.7 489.9 510.4 418 2.37 1 FALSE 0.0008268 0.0114 0.382 -250 66972 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPLEDGDQPDAK [K].rPLEDGDQPDAk.[K] N-Term(TMT6plex); K12(TMT6plex) 8 A0A0G2JFY5 Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1 A0A0G2JFY5; A0A0G2JGW9; Q0P6B2; A0A0G2JG00; Q3TUE1; Q91WJ8; Q3UUU2; Q3TIS5 Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element (FUSE) binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=2 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fubp1 PE=2 SV=1 0 3 3 0.7208 0 1 1 1 600.32977 1798.97477 1798.96995 2.68 0.00161 0/0 0 0 8742977 HCD 30 MS2 34.61021 564.8 110 54.9912 15374 15374 15367 QEplus033719.raw F4 586.1 510.7 631.8 425.4 680.5 554.3 348 4.8 1 FALSE 1.14E-05 8.90E-09 1.627 -250 66980 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAQDLVNER [K].gAQDLVNER.[L] N-Term(TMT6plex) 5 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; F6RDH3; Q62412; A0A571BF46 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=1 SV=8; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 2 2 0.356 0 1 1 1 615.83539 1230.6635 1230.66398 -0.39 -0.00024 0/0 0 0 6578422.5 HCD 30 MS2 25.72575 748.8 110 54.9937 15375 15375 15367 QEplus033719.raw F4 817.1 460.7 749.6 848 621 996.3 302 2.5 1 FALSE 1.14E-05 6.96E-05 0.887 -250 66999 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANAIPDGPR [K].aNAIPDGPR.[-G] N-Term(TMT6plex) 2 Q8BYL4 "Tyrosine--tRNA ligase, mitochondrial OS=Mus musculus OX=10090 GN=Yars2 PE=1 SV=2" F7BWC1; Q8BYL4 "Tyrosine--tRNA ligase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Yars2 PE=1 SV=8; Tyrosine--tRNA ligase, mitochondrial OS=Mus musculus OX=10090 GN=Yars2 PE=1 SV=2" 0 2 2 0.2709 0 1 1 1 570.32416 1139.64104 1139.63704 3.51 0.002 0/0 0 0 4337843 HCD 30 MS2 37.47544 656.5 110 54.9988 15377 15377 15367 QEplus033719.raw F4 716.4 506.5 677.3 543.3 755.8 739.5 215 2.03 1 FALSE 0.0009075 0.01251 0.366 -250 67006 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVTQALNR [K].aVTQALNR.[C] N-Term(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.5498 0 1 1 1 551.33276 1101.65825 1101.65777 0.43 0.00024 0/0 0 0 80497400 HCD 30 MS2 9.34702 653.1 19.087 55.0061 15379 15379 15378 QEplus033719.raw F4 647.3 606.6 712.9 496.2 799.5 656.2 241 2.71 1 FALSE 1.14E-05 0.000537 0.716 -250 67015 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQEELETATR [R].kQEELETATR.[F] N-Term(TMT6plex); K1(TMT6plex) 1 Q64521 "Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=2" Q64521 "Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=2" 1 2 2 0.669 0 1 1 1 831.97333 1662.93938 1662.94267 -1.98 -0.00165 0/0 0 0 3810982.5 HCD 30 MS2 0 141.6 110 55.0086 15380 15380 15378 QEplus033719.raw F4 125.1 155.2 174.6 109.3 142.8 142.7 463 2.9 1 FALSE 1.14E-05 1.97E-06 1.181 -250 67023 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGETENEEFEK [R].rGETENEEFEk.[L] N-Term(TMT6plex); K11(TMT6plex) 11 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; F6RGN9; Q3UGC3; E9QA15; F6ZAW1; E9Q0M9; D3Z6I7; S4R1T7; F6T2Z7; E9QA16; F6QLP8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 1 3 3 0.6806 0 1 1 1 609.31628 1825.9343 1825.93323 0.59 0.00036 0/0 0 0 52828876 HCD 30 MS2 28.54053 790.2 26.163 55.0109 15381 15381 15378 QEplus033719.raw F4 784.2 740.9 844.9 600.8 1047.6 722.8 273 5.04 1 FALSE 1.14E-05 1.52E-11 2.152 -250 67027 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSDNWR [K].vSDNWR.[I] N-Term(TMT6plex) 2 Q9D358 Low molecular weight phosphotyrosine protein phosphatase OS=Mus musculus OX=10090 GN=Acp1 PE=1 SV=3 A0A1W2P7X3; Q9D358 Acid phosphatase OS=Mus musculus OX=10090 GN=Acp1 PE=1 SV=1; Low molecular weight phosphotyrosine protein phosphatase OS=Mus musculus OX=10090 GN=Acp1 PE=1 SV=3 0 2 2 0.3838 0 1 1 1 503.2699 1005.53252 1005.53151 1 0.0005 0/0 0 0 19384152 HCD 30 MS2 66.57404 854.7 34.706 55.0131 15382 15382 15378 QEplus033719.raw F4 773.1 823 1023.3 628.5 1012.2 868.2 225 1.85 1 FALSE 0.003531 0.06806 0.093 -250 67044 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLEDTK [K].sLEDTk.[N] N-Term(TMT6plex); K6(TMT6plex) 1 P35527 "SWISS-PROT:P35527 Tax_Id=9606 Gene_Symbol=KRT9 Keratin, type I cytoskeletal 9" P35527 "SWISS-PROT:P35527 Tax_Id=9606 Gene_Symbol=KRT9 Keratin, type I cytoskeletal 9" 0 2 2 0.2277 0 1 1 1 575.84058 1150.67388 1150.67197 1.65 0.00095 0/0 0 0 12154270 HCD 30 MS2 38.57495 1277.8 110 55.0179 15384 15384 15378 QEplus033719.raw F4 1354.1 1170.5 931.7 1458.9 1693.5 1058.2 245 2.02 1 TRUE 0.003142 0.06131 0.11 -250 67054 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMMAACDPR [K].nMMAAcDPR.[H] N-Term(TMT6plex); C6(Carbamidomethyl) 14 Q7TMM9; P99024; P68372; Q9CWF2; Q3UMM1 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1;Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=1 SV=1 Q7TMM9; Q9D6F9; Q9CVR0; Q9ERD7; Q9CUN8; Q80ZV2; Q3U9U3; Q9CRT0; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2; Q3UMM1 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Tubulin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-3 chain OS=Mus musculus OX=10090 GN=Tubb3 PE=1 SV=1; Tubulin_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb6 PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=2 SV=1; Tubulin_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1; Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=1 SV=1 0 3 3 0.8885 0 1 1 1 432.20206 1294.59162 1294.59036 0.97 0.00042 0/0 0 0 116625168 HCD 30 MS2 18.20894 324.8 11.729 55.0201 15385 15385 15378 QEplus033719.raw F4 278.9 293.7 363.4 283 345.4 384.2 16 2.96 5 FALSE 0.001125 0.01495 0.333 -250 67056 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVIVCNTK [R].rVIVcNTk.[Q] N-Term(TMT6plex); C5(Carbamidomethyl); K8(TMT6plex) 3 Q3V471 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1 Q3V471; P16110; Q8C253 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1; Galectin-3 OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=3; Galectin OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=1 1 3 3 0.6283 0 1 1 1 483.29935 1447.88349 1447.88193 1.08 0.00052 0/0 0 0 37543268 HCD 30 MS2 40.96074 1159.9 42.004 55.0224 15386 15386 15378 QEplus033719.raw F4 1613.6 953.9 1182.3 905.1 1025.3 1279.1 340 3.74 1 FALSE 1.14E-05 1.42E-05 1.018 -250 67072 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGDGADPEGEGVTLQR [R].rGDGADPEGEGVTLQR.[N] N-Term(TMT6plex) 2 Q3UQM7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc7a5 PE=2 SV=1 Q3UQM7; Q9Z127 Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc7a5 PE=2 SV=1; Large neutral amino acids transporter small subunit 1 OS=Mus musculus OX=10090 GN=Slc7a5 PE=1 SV=2 1 3 3 0.685 0 1 1 1 629.32452 1885.95902 1885.95653 1.32 0.00083 0/0 0 0 18088074 HCD 30 MS2 18.95806 379.3 110 55.0272 15388 15388 15378 QEplus033719.raw F4 407.1 303.8 402.2 391.6 385.2 385.7 245 4 1 FALSE 1.14E-05 6.31E-16 3.56 -250 67090 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EILDSR [RK].eILDSR.[GLE] N-Term(TMT6plex) 14 A0A0N4SUX5; P21550 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno2 PE=1 SV=1;Beta-enolase OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=3 D3YVD3; Q4FK59; Q5SX59; A0A0N4SUI6; D3Z6E4; A0A0N4SUX5; A0A0N4SUW8; P21550; Q5SX61; Q545V3; D3Z2S4; Q922A0; Q5SX60; Q3UJ20 Gamma-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno2 PE=1 SV=8; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno3 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=1; Gamma-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno2 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno2 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno2 PE=1 SV=1; Gamma-enolase OS=Mus musculus OX=10090 GN=Eno2 PE=1 SV=1; Beta-enolase OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=3; Beta-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno2 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno2 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno2 PE=2 SV=1; Beta-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno2 PE=2 SV=1 0 2 2 0.1757 0 1 1 1 481.27939 961.5515 961.55158 -0.08 -0.00004 0/0 0 0 26799386 HCD 30 MS2 25.466 878.2 57.636 55.0368 15391 15391 15389 QEplus033719.raw F4 1080.5 510.2 838.6 972.3 699.5 1168.2 200 2.22 2 FALSE 0.008399 0.1464 -0.083 -250 67091 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELIDSR [RK].eLIDSR.[GLE] N-Term(TMT6plex) 3 A0A1L1STC6 Nesprin-1 OS=Mus musculus OX=10090 GN=Syne1 PE=1 SV=1 A0A1L1STC6; Q6ZWR6-4; Q6ZWR6 Nesprin-1 OS=Mus musculus OX=10090 GN=Syne1 PE=1 SV=1; Isoform 4 of Nesprin-1 OS=Mus musculus OX=10090 GN=Syne1; Nesprin-1 OS=Mus musculus OX=10090 GN=Syne1 PE=1 SV=2 0 2 2 0.1757 0 1 2 2 481.27939 961.5515 961.55158 -0.08 -0.00004 0/0 0 0 26799386 HCD 30 MS2 25.466 878.2 57.636 55.0368 15391 15391 15389 QEplus033719.raw F4 1080.5 510.2 838.6 972.3 699.5 1168.2 200 2.22 1 FALSE 0.008399 0.1464 -0.083 -250 67092 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELLDSR [RK].eLLDSR.[GLE] N-Term(TMT6plex) 4 Q923T7-3; Q5NCB7; Q923T7; B2RR25 Isoform 3 of E3 ubiquitin-protein ligase TRIM7 OS=Mus musculus OX=10090 GN=Trim7; E3 ubiquitin-protein ligase TRIM7 OS=Mus musculus OX=10090 GN=Trim7 PE=4 SV=2; E3 ubiquitin-protein ligase TRIM7 OS=Mus musculus OX=10090 GN=Trim7 PE=2 SV=2; E3 ubiquitin-protein ligase TRIM7 OS=Mus musculus OX=10090 GN=Trim7 PE=2 SV=1 0 2 2 0.1757 0 1 3 3 481.27939 961.5515 961.55158 -0.08 -0.00004 0/0 0 0 26799386 HCD 30 MS2 25.466 878.2 57.636 55.0368 15391 15391 15389 QEplus033719.raw F4 1080.5 510.2 838.6 972.3 699.5 1168.2 200 2.22 3 FALSE 0.008399 0.1464 -0.083 -250 67096 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLSYNTASNK [R].rLSYNTASNk.[T] N-Term(TMT6plex); K10(TMT6plex) 3 Q9D1R9 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=2 A0A0G2JGY8; Q9D1R9; A0A0G2JEY6 60S ribosomal protein L34 (Fragment) OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=4; 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=2; 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=1 1 3 3 0.65 0 1 1 1 537.97833 1611.92044 1611.92188 -0.89 -0.00048 0/0 0 0 21159552 HCD 30 MS2 34.62611 932.2 52.909 55.039 15392 15392 15389 QEplus033719.raw F4 966.5 813.1 1025.8 747.3 1133.4 907.2 416 3.8 1 FALSE 1.14E-05 9.47E-07 1.242 -250 67104 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CNCQSHGIPASPK [K].cNcQSHGIPASPk.[C] N-Term(TMT6plex); C1(Carbamidomethyl); C3(Carbamidomethyl); K13(TMT6plex) 2 P09055 Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 P09055-2; P09055 Isoform 2 of Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1; Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 0 3 3 0.8441 0 1 1 1 638.66315 1913.97489 1913.97261 1.19 0.00076 0/0 0 0 16792906 HCD 30 MS2 4.341961 678.5 110 55.0415 15393 15393 15389 QEplus033719.raw F4 768.4 570.5 666.6 644.9 792.2 628.5 243 4.17 1 FALSE 1.14E-05 7.06E-12 2.216 -250 67145 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGETTPDK [K].vGETTPDk.[L] N-Term(TMT6plex); K8(TMT6plex) 2 Q9D6J6 "NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv2 PE=1 SV=2" Q9D6J6-2; Q9D6J6 "Isoform 2 of NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv2; NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv2 PE=1 SV=2" 0 3 3 0.0993 0 1 1 1 435.58661 1304.74527 1304.7462 -0.71 -0.00031 0/0 0 0 14340062 HCD 30 MS2 49.58635 549.4 44.805 55.0564 15399 15399 15389 QEplus033719.raw F4 588.1 389.8 585.5 551.2 540.4 641.4 426 2.82 1 FALSE 0.001778 0.03065 0.213 -250 67153 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGVPEGTQLQAHR [K].dGVPEGTQLQAHR.[N] N-Term(TMT6plex) 5 Q9JKB3; Q68G78 Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3 PE=1 SV=2;Csda protein OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1 Q9JKB3; Q61478; Q68G78; Q9JKB3-2; Q8BPG0 Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3 PE=1 SV=2; DbpA murine homologue OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1; Csda protein OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1; Isoform 2 of Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3; CSD domain-containing protein OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1 0 3 3 0.8026 0 1 1 1 546.29047 1636.85685 1636.86045 -2.2 -0.0012 0/0 0 0 37609884 HCD 30 MS2 27.1187 500.1 43.065 55.0637 15401 15401 15400 QEplus033719.raw F4 615.5 384.9 571 429.6 482.1 517.6 288 6.08 2 FALSE 1.14E-05 1.17E-12 2.364 -250 67166 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPVGPHGPPGK [R].gPVGPHGPPGk.[D] N-Term(TMT6plex); K11(TMT6plex) 9 Q3TW25; Q7TT32 "Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1;Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BJU6; Q8BKY2; Q3TW25; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 3 3 0.7255 0 1 1 1 486.62631 1457.86438 1457.8629 1.01 0.00049 0/0 0 0 64174244 HCD 30 MS2 23.14715 567.9 21.862 55.0684 15403 15403 15400 QEplus033719.raw F4 556.7 559.8 648.3 478.2 525.2 639.1 337 4.99 2 FALSE 1.14E-05 7.11E-12 2.215 -250 67172 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREEQAEPDGTEVADK [K].qREEQAEPDGTEVADk.[AT] N-Term(TMT6plex); K16(TMT6plex) 11 Q5SX40; P13541; Q5SX39; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; Q3UUB1; B2RWX0; Q8BLW0; I6L963; B1AR69; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 3 3 0.8292 0 1 1 1 754.05469 2260.14951 2260.14574 1.67 0.00126 0/0 0 0 18212024 HCD 30 MS2 3.474059 406.7 110 55.071 15404 15404 15400 QEplus033719.raw F4 532.2 69.2 289.2 840.9 51.4 657.2 261 7.2 4 FALSE 1.14E-05 6.31E-16 4.38 -250 67179 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVDNVRPDR [R].iVDNVRPDR.[Q] N-Term(TMT6plex) 4 Q569Z5 Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus OX=10090 GN=Ddx46 PE=1 SV=2 Q3UZ56; Q569Z5; F8WHR6; Q569Z5-2 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ddx46 PE=2 SV=1; Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus OX=10090 GN=Ddx46 PE=1 SV=2; RNA helicase OS=Mus musculus OX=10090 GN=Ddx46 PE=1 SV=1; Isoform 2 of Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus OX=10090 GN=Ddx46 0 3 3 0.4056 0 1 1 1 438.25644 1312.75476 1312.75346 0.99 0.00043 0/0 0 0 17999826 HCD 30 MS2 50.27069 820.3 57.139 55.0732 15405 15405 15400 QEplus033719.raw F4 772.5 720.7 933.5 686.5 794.8 1013.9 322 2.86 1 FALSE 0.0008268 0.01151 0.381 -250 67211 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAVHYGGWEHR [K].dAVHYGGWEHR.[D] N-Term(TMT6plex) 4 A1A4T2 Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1 Q8BHN3-3; A1A4T2; Q3UE86; Q8BHN3 Isoform 3 of Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab; Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Gal_mutarotas_2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab PE=1 SV=1 0 4 4 0.7535 0 1 1 1 389.69547 1555.76003 1555.76034 -0.2 -0.00008 0/0 0 0 7217902 HCD 30 MS2 46.13895 407.4 99.99 55.0826 15409 15409 15400 QEplus033719.raw F4 433 305.2 445.3 427.8 400.1 432.7 110 4.99 1 FALSE 1.14E-05 5.29E-07 1.29 -250 67217 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQRYESLK [R].sQRYESLk.[G] N-Term(TMT6plex); K8(TMT6plex) 4 P47915 60S ribosomal protein L29 OS=Mus musculus OX=10090 GN=Rpl29 PE=1 SV=2 A0A1L1SS27; P47915; W4VSN7; A0A1L1STJ3 60S ribosomal protein L29 (Fragment) OS=Mus musculus OX=10090 GN=Rpl29 PE=1 SV=1; 60S ribosomal protein L29 OS=Mus musculus OX=10090 GN=Rpl29 PE=1 SV=2; 60S ribosomal protein L29 OS=Mus musculus OX=10090 GN=Gm3550 PE=3 SV=1; 60S ribosomal protein L29 (Fragment) OS=Mus musculus OX=10090 GN=Rpl29 PE=1 SV=1 1 3 3 0.4555 0 1 1 1 490.28897 1468.85236 1468.8524 -0.03 -0.00001 0/0 0 0 50700824 HCD 30 MS2 17.72738 994.8 36.75 55.0848 15410 15410 15400 QEplus033719.raw F4 1050.9 988 1136.8 632.1 1324.9 835.8 306 2.81 1 FALSE 0.0002419 0.005014 0.501 -250 67239 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSEESEELR [K].vSEESEELR.[S] N-Term(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.5478 0 1 1 1 653.8385 1306.66973 1306.66879 0.72 0.00047 0/0 0 0 29278384 HCD 30 MS2 34.18707 867.3 66.657 55.0969 15414 15414 15411 QEplus033719.raw F4 948.7 361.3 796.1 1277.5 507.6 1312.3 200 3.14 2 FALSE 1.14E-05 0.0003951 0.742 -250 67245 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQPSQAAEEPAEK [K].aQPSQAAEEPAEk.[A] N-Term(TMT6plex); K13(TMT6plex) 3 Q3TS44 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 A0A1B0GS70; Q8BTU5; Q3TS44 Proteasome subunit alpha type-1 OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 0 3 3 0.7647 0 1 1 1 605.32776 1813.96872 1813.96961 -0.49 -0.0003 0/0 0 0 11998134 HCD 30 MS2 35.47031 602.8 110 55.0994 15415 15415 15411 QEplus033719.raw F4 664.7 475.7 667.9 548.1 589.9 670.5 347 5.1 1 FALSE 1.14E-05 3.97E-10 1.883 -250 67253 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MREVCDEVR [R].mREVcDEVR.[A] N-Term(TMT6plex); C5(Carbamidomethyl) 2 Q9CZN7 "Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" Q9CZN7-2; Q9CZN7 "Isoform 2 of Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2; Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" 1 2 2 0.3711 0 1 1 1 711.8562 1422.70513 1422.70308 1.43 0.00102 0/0 0 0 7755468 HCD 30 MS2 35.84999 346.1 110 55.1019 15416 15416 15411 QEplus033719.raw F4 395 300.3 358.4 307.3 381.4 334.4 144 2.56 1 FALSE 0.001231 0.01657 0.314 -250 67260 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMSIDQAR [K].eMSIDQAR.[Y] N-Term(TMT6plex) 2 E9QM38 Solute carrier family 12 member 2 OS=Mus musculus OX=10090 GN=Slc12a2 PE=1 SV=1 E9QM38; P55012 Solute carrier family 12 member 2 OS=Mus musculus OX=10090 GN=Slc12a2 PE=1 SV=1; Solute carrier family 12 member 2 OS=Mus musculus OX=10090 GN=Slc12a2 PE=1 SV=2 0 2 2 0.4291 0 1 1 1 589.80542 1178.60356 1178.60369 -0.11 -0.00006 0/0 0 0 7564717 HCD 30 MS2 40.97991 883.9 110 55.1044 15417 15417 15411 QEplus033719.raw F4 924.9 584.8 972.8 953.5 764.7 1102.9 155 2.47 1 FALSE 1.14E-05 0.0002022 0.798 -250 67266 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SWVGAER [R].sWVGAER.[S] N-Term(TMT6plex) 2 Q8VD62 UPF0696 protein C11orf68 homolog OS=Mus musculus OX=10090 GN=Bles03 PE=1 SV=2 Q8VD62-1; Q8VD62 Isoform 1 of UPF0696 protein C11orf68 homolog OS=Mus musculus OX=10090 GN=Bles03; UPF0696 protein C11orf68 homolog OS=Mus musculus OX=10090 GN=Bles03 PE=1 SV=2 0 2 2 0.3333 0 1 1 1 517.28577 1033.56426 1033.56281 1.4 0.00072 0/0 0 0 6691398.5 HCD 30 MS2 34.75037 845.5 110 55.1069 15418 15418 15411 QEplus033719.raw F4 985.1 806.6 864.1 685.3 887.1 845.1 325 1.98 1 FALSE 0.001506 0.02221 0.263 -250 67276 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMSGDVK [K].eMSGDVk.[D] N-Term(TMT6plex); K7(TMT6plex) 6 P14824; Q99JX6 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3;Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 P14824; F8WIT2; Q3UI56; Q3TUI1; Q99JX6; Q3UDK4 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 0 2 2 0.3498 0 1 1 1 612.33868 1223.67009 1223.67059 -0.41 -0.00025 0/0 0 0 38350016 HCD 30 MS2 46.80173 1415.3 43.302 55.1092 15419 15419 15411 QEplus033719.raw F4 1748.6 1024.9 1406.1 1460 1563.9 1288.1 318 2.23 2 FALSE 0.001108 0.01443 0.34 -250 67292 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLQAAGNAVK [K].rLQAAGNAVk.[R] N-Term(TMT6plex); K10(TMT6plex) 10 A0A1L1SQ51; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1;Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; A0A1L1SQ51; B2RY15; Q6PB69; Q8CDM9; Q0V930; Q3UHS6; Q3TBC3; E9PUM4; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Tln2 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 1 3 3 0.6384 0 1 1 1 495.9805 1485.92694 1485.92657 0.25 0.00013 0/0 0 0 13057998 HCD 30 MS2 23.08662 1252.8 110 55.1139 15421 15421 15411 QEplus033719.raw F4 1484.2 1104.8 1271.5 1021.9 1477.7 1156.6 306 4.84 2 FALSE 1.14E-05 1.82E-10 1.948 -250 67330 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYREELKR [R].vYREELkR.[D] N-Term(TMT6plex); K7(TMT6plex) 6 B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 Q4FK88; Q3US43; Q4FJV4; Q3U5N9; A0A494BBD8; B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 2 4 4 0.3518 0 1 1 1 388.49109 1550.94253 1550.94188 0.41 0.00016 0/0 0 0 22056804 HCD 30 MS2 9.959526 600.6 58.578 55.1283 15426 15426 15422 QEplus033719.raw F4 494.6 889.8 745.3 404.4 597.6 471.8 386 2.53 1 FALSE 0.005781 0.09683 0.015 -250 67338 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYMGECGYR [K].gYMGEcGYR.[G] N-Term(TMT6plex); C6(Carbamidomethyl) 1 Q8BGT5 Alanine aminotransferase 2 OS=Mus musculus OX=10090 GN=Gpt2 PE=1 SV=1 Q8BGT5 Alanine aminotransferase 2 OS=Mus musculus OX=10090 GN=Gpt2 PE=1 SV=1 0 2 2 0.7077 0 1 1 1 661.29761 1321.58794 1321.58666 0.97 0.00064 0/0 0 0 14557249 HCD 30 MS2 71.84216 1193.6 73.204 55.1305 15427 15427 15422 QEplus033719.raw F4 1206 887.9 1276.3 1167.7 1347.9 1275.7 16 2.6 1 FALSE 0.0006294 0.009457 0.413 -250 67344 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSATAVPK [K].tSATAVPk.[D] N-Term(TMT6plex); K8(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 2 2 0.573 0 1 1 1 616.88544 1232.7636 1232.76146 1.73 0.00107 0/0 0 0 13229453 HCD 30 MS2 48.8327 1249.5 110 55.1331 15428 15428 15422 QEplus033719.raw F4 1528.5 400.6 1226.3 1779.3 521.2 2041.1 459 2.74 1 FALSE 0.0002119 0.004327 0.518 -250 67354 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VPSGQNAETQK [K].vPSGQNAETQk.[T] N-Term(TMT6plex); K11(TMT6plex) 4 Q6PGB6 N-alpha-acetyltransferase 50 OS=Mus musculus OX=10090 GN=Naa50 PE=1 SV=1 Q6PGB6-2; Q6PGB6; Q6PGB6-4; Q6PGB6-3 Isoform 2 of N-alpha-acetyltransferase 50 OS=Mus musculus OX=10090 GN=Naa50; N-alpha-acetyltransferase 50 OS=Mus musculus OX=10090 GN=Naa50 PE=1 SV=1; Isoform 4 of N-alpha-acetyltransferase 50 OS=Mus musculus OX=10090 GN=Naa50; Isoform 3 of N-alpha-acetyltransferase 50 OS=Mus musculus OX=10090 GN=Naa50 0 2 2 0.7351 0 1 1 1 808.95697 1616.90666 1616.90081 3.62 0.00293 0/0 0 0 6649132 HCD 30 MS2 10.41258 239.4 110 55.1356 15429 15429 15422 QEplus033719.raw F4 240.4 171.3 261.6 193.8 286.8 282.2 403 3.36 1 FALSE 1.14E-05 8.70E-10 1.819 -250 67360 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCEDMDECSIR [K].ncEDMDEcSIR.[N] N-Term(TMT6plex); C2(Carbamidomethyl); C8(Carbamidomethyl) 3 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q60784 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Fibrillin-1 (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1 0 2 2 0.8456 0 1 1 1 829.3457 1657.68413 1657.68176 1.43 0.00119 0/0 0 0 6147638.5 HCD 30 MS2 0 346.5 110 55.1381 15430 15430 15422 QEplus033719.raw F4 343 237.7 430.9 456.6 176.3 434.3 4 4.34 1 FALSE 1.14E-05 2.92E-07 1.339 -250 67363 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQPSQAAEEPAEK [K].aQPSQAAEEPAEk.[A] N-Term(TMT6plex); K13(TMT6plex) 3 Q3TS44 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 A0A1B0GS70; Q8BTU5; Q3TS44 Proteasome subunit alpha type-1 OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 0 2 2 0.7357 0 1 1 1 907.48914 1813.97099 1813.96961 0.76 0.00069 0/0 0 0 4636970 HCD 30 MS2 0 296.9 110 55.1406 15431 15431 15422 QEplus033719.raw F4 331.8 232 310.9 236.6 350.5 319.8 367 4.88 1 FALSE 1.14E-05 1.70E-13 2.523 -250 67370 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLSYNTASNK [R].rLSYNTASNk.[T] N-Term(TMT6plex); K10(TMT6plex) 3 Q9D1R9 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=2 A0A0G2JGY8; Q9D1R9; A0A0G2JEY6 60S ribosomal protein L34 (Fragment) OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=4; 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=2; 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=1 1 2 2 0.5052 0 1 1 1 806.46387 1611.92046 1611.92188 -0.88 -0.00071 0/0 0 0 3982418.5 HCD 30 MS2 0 232.1 110 55.1432 15432 15432 15422 QEplus033719.raw F4 232.5 202.6 267.7 217.9 240.7 231 416 2.91 1 FALSE 1.14E-05 7.35E-07 1.263 -250 67379 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGTGATATVSPK [K].sGTGATATVSPk.[E] N-Term(TMT6plex); K12(TMT6plex) 4 D6RCY6 Actin-histidine N-methyltransferase OS=Mus musculus OX=10090 GN=Setd3 PE=1 SV=1 D6RCY6; F2Z438; Q91WC0; F2Z420 Actin-histidine N-methyltransferase OS=Mus musculus OX=10090 GN=Setd3 PE=1 SV=1; Protein-histidine N-methyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Setd3 PE=1 SV=1; Actin-histidine N-methyltransferase OS=Mus musculus OX=10090 GN=Setd3 PE=1 SV=1; Protein-histidine N-methyltransferase OS=Mus musculus OX=10090 GN=Setd3 PE=1 SV=1 0 2 2 0.7217 0 1 1 1 767.94745 1534.88762 1534.88409 2.3 0.00176 0/0 0 0 1874063.75 HCD 30 MS2 52.38924 218.7 110 55.153 15435 15435 15433 QEplus033719.raw F4 229 188.1 222.1 195.3 238.8 238.9 449 4.24 1 FALSE 1.14E-05 2.48E-11 2.112 -250 67385 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CGIQADAK [K].cGIQADAk.[L] N-Term(TMT6plex); C1(Carbamidomethyl); K8(TMT6plex) 3 Q3TLE2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fermt2 PE=1 SV=1 A6X940; Q3UMA4; Q3TLE2 Fermitin family homolog 2 (Fragment) OS=Mus musculus OX=10090 GN=Fermt2 PE=1 SV=1; B41 domain-containing protein OS=Mus musculus OX=10090 GN=Fermt2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fermt2 PE=1 SV=1 0 2 2 0.3321 0 1 1 1 660.87134 1320.7354 1320.73459 0.61 0.0004 0/0 0 0 22209002 HCD 30 MS2 52.80914 1165.2 67.997 55.1553 15436 15436 15433 QEplus033719.raw F4 1187.5 974.3 1222.4 1071 1355.7 1180.5 439 2.71 1 FALSE 1.14E-05 0.0002299 0.788 -250 67394 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LENGPEVR [K].lENGPEVR.[Q] N-Term(TMT6plex) 3 F8VQK4 Acetylcholine receptor subunit gamma OS=Mus musculus OX=10090 GN=Chrng PE=3 SV=1 F8VQK4; P04760; P04760-2 Acetylcholine receptor subunit gamma OS=Mus musculus OX=10090 GN=Chrng PE=3 SV=1; Acetylcholine receptor subunit gamma OS=Mus musculus OX=10090 GN=Chrng PE=2 SV=1; Isoform Short of Acetylcholine receptor subunit gamma OS=Mus musculus OX=10090 GN=Chrng 0 2 2 0.1026 0 1 1 1 571.8233 1142.63933 1142.6367 2.3 0.00131 0/0 0 0 18523688 HCD 30 MS2 10.18618 1141.1 110 55.1578 15437 15437 15433 QEplus033719.raw F4 1269.7 674.5 1189.1 1492.9 700.9 1519.3 164 2.34 1 FALSE 0.0001187 0.003156 0.553 -250 67402 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQLENEK [RK].aQLENEk.[KQ] N-Term(TMT6plex); K7(TMT6plex) 12 P26043; A0A0R4J0J8 Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3;Cytospin-A OS=Mus musculus OX=10090 GN=Specc1l PE=1 SV=1 P26043; Q3TH46; A0A0R4J0J8; Q3U111; Q8C9Q9; A0A5F8MPB9; Q7TSG6; Q3UJJ8; Q8C2N4; Q2KN98; Q05CE6; Q6GQV8 Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; Cytospin-A OS=Mus musculus OX=10090 GN=Specc1l PE=1 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; Cytospin-A (Fragment) OS=Mus musculus OX=10090 GN=Specc1l PE=2 SV=1; Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=1; Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=2; Cytospin-A OS=Mus musculus OX=10090 GN=Specc1l PE=1 SV=1; Rdx protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; Cytospin-A OS=Mus musculus OX=10090 GN=Specc1l PE=2 SV=1 0 2 2 0.0857 0 1 1 1 645.3772 1289.74712 1289.74654 0.45 0.00029 0/0 0 0 17573838 HCD 30 MS2 12.06841 1041.1 110 55.1603 15438 15438 15433 QEplus033719.raw F4 1169.8 923.3 1078.9 808.6 1356.9 909 482 2.45 2 FALSE 0.0006294 0.009367 0.415 -250 67416 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAQPTPVKPPR [K].aAQPTPVkPPR.[V] N-Term(TMT6plex); K8(TMT6plex) 1 Q91VJ2 Caveolae-associated protein 3 OS=Mus musculus OX=10090 GN=Cavin3 PE=1 SV=1 Q91VJ2 Caveolae-associated protein 3 OS=Mus musculus OX=10090 GN=Cavin3 PE=1 SV=1 0 3 3 0.6926 0 1 1 1 540.67261 1620.00327 1619.99973 2.18 0.00118 0/0 0 0 15188376 HCD 30 MS2 60.86699 1229.8 94.806 55.1648 15440 15440 15433 QEplus033719.raw F4 1217.6 1164 1391.8 875.6 1370.8 1359 315 3.09 1 FALSE 1.14E-05 0.0002542 0.779 -250 67423 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YRPSMEGYR [R].yRPSMEGYR.[A] N-Term(TMT6plex) 19 P30999 Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2 P30999-2; E9Q906; Q3TPD1; E9Q905; D3Z2H2; P30999; E9Q8Z9; G3X9V2; E9Q903; E9Q986; E9Q8Z8; E9Q901; E9Q8Z6; P30999-3; E9Q904; E9Q8Z5; E9Q8Z4; D3Z7H6; E9Q907 Isoform 2 of Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Isoform 3 of Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1 0 3 3 0.6024 0 1 1 1 463.23846 1387.70084 1387.69899 1.34 0.00062 0/0 0 0 14795697 HCD 30 MS2 22.12727 584.7 64.728 55.1671 15441 15441 15433 QEplus033719.raw F4 561.6 559.8 661.2 439.3 655.6 630.6 126 3.37 1 FALSE 0.002249 0.04436 0.16 -250 67430 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHPQDPIDTK [R].sHPQDPIDTk.[D] N-Term(TMT6plex); K10(TMT6plex) 8 Q8BML9 Glutamine--tRNA ligase OS=Mus musculus OX=10090 GN=Qars1 PE=1 SV=1 A0A140LJK5; D3Z158; Q3TIN2; A0A140LHB3; A0A140LIS6; A0A140LHJ3; A0A140LHZ5; Q8BML9 Glutaminyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Qars PE=1 SV=2; Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=1 SV=2; Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=2 SV=1; Glutaminyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutaminyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutaminyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutamine--tRNA ligase OS=Mus musculus OX=10090 GN=Qars1 PE=1 SV=1 0 3 3 0.5433 0 1 1 1 532.6319 1595.88114 1595.87934 1.13 0.0006 0/0 0 0 13775028 HCD 30 MS2 51.0435 1138.9 110 55.1696 15442 15442 15433 QEplus033719.raw F4 1219.6 942.9 1244.1 887.1 1264.9 1274.7 383 3.81 1 FALSE 1.14E-05 3.46E-06 1.135 -250 67440 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCCAALK [K].gccAALk.[A] N-Term(TMT6plex); C2(Carbamidomethyl); C3(Carbamidomethyl); K7(TMT6plex) 7 Q80SW1 S-adenosylhomocysteine hydrolase-like protein 1 OS=Mus musculus OX=10090 GN=Ahcyl1 PE=1 SV=1 Q80SW1; Q68FL4; F8WGT1; F8WI65; H3BKT5; Q80TQ9; Q68FL4-2 S-adenosylhomocysteine hydrolase-like protein 1 OS=Mus musculus OX=10090 GN=Ahcyl1 PE=1 SV=1; Putative adenosylhomocysteinase 3 OS=Mus musculus OX=10090 GN=Ahcyl2 PE=1 SV=1; Putative adenosylhomocysteinase 3 OS=Mus musculus OX=10090 GN=Ahcyl2 PE=1 SV=1; Adenosylhomocysteinase 3 isoform 4 OS=Mus musculus OX=10090 GN=Ahcyl2 PE=1 SV=1; Putative adenosylhomocysteinase 3 OS=Mus musculus OX=10090 GN=Ahcyl2 PE=1 SV=1; Adenosylhomocysteinase (Fragment) OS=Mus musculus OX=10090 GN=Ahcyl2 PE=2 SV=1; Isoform 2 of Putative adenosylhomocysteinase 3 OS=Mus musculus OX=10090 GN=Ahcyl2 0 2 2 0.5949 0 1 1 1 619.34412 1237.68096 1237.67972 1 0.00062 0/0 0 0 12856793 HCD 30 MS2 0 1191.5 110 55.1721 15443 15443 15433 QEplus033719.raw F4 1177.9 1163.9 1259.5 820.2 1675.7 1051.8 330 1.95 1 FALSE 0.001074 0.01374 0.349 -250 67445 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVAPIER [K].tAVAPIER.[V] N-Term(TMT6plex) 4 Q8BVI9; P51881 ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a4 PE=2 SV=1;ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3 B2RTC8; Q8BVI9; P48962; P51881 ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a31 PE=1 SV=1; ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a4 PE=2 SV=1; ADP/ATP translocase 1 OS=Mus musculus OX=10090 GN=Slc25a4 PE=1 SV=4; ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3 0 2 2 0.3123 0 1 1 1 543.33008 1085.65288 1085.65162 1.16 0.00063 0/0 0 0 144197216 HCD 30 MS2 13.35545 547.6 7.791 55.1794 15445 15445 15444 QEplus033719.raw F4 506.8 431.4 596.4 551.1 529.9 669.7 250 3.01 2 FALSE 1.14E-05 0.0004357 0.734 -250 67451 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMMAACDPR [K].nMMAAcDPR.[H] N-Term(TMT6plex); C6(Carbamidomethyl) 14 Q7TMM9; P99024; P68372; Q9CWF2; Q3UMM1 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1;Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=1 SV=1 Q7TMM9; Q9D6F9; Q9CVR0; Q9ERD7; Q9CUN8; Q80ZV2; Q3U9U3; Q9CRT0; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2; Q3UMM1 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Tubulin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-3 chain OS=Mus musculus OX=10090 GN=Tubb3 PE=1 SV=1; Tubulin_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb6 PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=2 SV=1; Tubulin_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1; Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=1 SV=1 0 2 2 0.8996 0 1 1 1 647.79944 1294.5916 1294.59036 0.96 0.00062 0/0 0 0 109652928 HCD 30 MS2 13.76708 468.6 14.961 55.1817 15446 15446 15444 QEplus033719.raw F4 462.1 394.4 508.8 416.6 542.4 487 16 2.79 5 FALSE 0.0006383 0.009744 0.409 -250 67463 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GKLEEQKPER [K].gkLEEQkPER.[V] N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex) 2 P63028 Translationally-controlled tumor protein OS=Mus musculus OX=10090 GN=Tpt1 PE=1 SV=1 D3YU75; P63028 Translationally-controlled tumor protein OS=Mus musculus OX=10090 GN=Tpt1 PE=1 SV=1; Translationally-controlled tumor protein OS=Mus musculus OX=10090 GN=Tpt1 PE=1 SV=1 1 4 4 0.3483 0 1 1 1 476.04132 1901.14345 1901.14232 0.6 0.00028 0/0 0 0 62781436 HCD 30 MS2 14.91451 1261 25.827 55.1884 15449 15449 15444 QEplus033719.raw F4 1392.5 968.6 1369.8 955.7 1423 1456.1 361 2.01 1 FALSE 0.006767 0.1077 -0.014 -250 67480 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SKDEPQRETLK [R].skDEPQRETLk.[A] N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex) 1 P40240 CD9 antigen OS=Mus musculus OX=10090 GN=Cd9 PE=1 SV=2 P40240 CD9 antigen OS=Mus musculus OX=10090 GN=Cd9 PE=1 SV=2 2 4 4 0.4475 0 1 1 1 505.30142 2018.18386 2018.18492 -0.52 -0.00026 0/0 0 0 61047660 HCD 30 MS2 18.70329 959.3 24.675 55.193 15451 15451 15444 QEplus033719.raw F4 940.6 1107.9 1111.4 631 1140.4 824.7 377 2.57 1 FALSE 0.001117 0.01465 0.337 -250 67487 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMQGLTGR [K].aMQGLTGR.[K] N-Term(TMT6plex) 5 P26369 Splicing factor U2AF 65 kDa subunit OS=Mus musculus OX=10090 GN=U2af2 PE=1 SV=3 P26369; Q505Q1; Q80XR5; Q922I0; Q3KQM4 Splicing factor U2AF 65 kDa subunit OS=Mus musculus OX=10090 GN=U2af2 PE=1 SV=3; U2 snRNP auxiliary factor large subunit (Fragment) OS=Mus musculus OX=10090 GN=U2af2 PE=2 SV=1; U2 snRNP auxiliary factor large subunit OS=Mus musculus OX=10090 GN=U2af2 PE=1 SV=1; U2 snRNP auxiliary factor large subunit OS=Mus musculus OX=10090 GN=U2af2 PE=2 SV=1; U2 snRNP auxiliary factor large subunit OS=Mus musculus OX=10090 GN=U2af2 PE=1 SV=1 0 2 2 0.5679 0 1 1 1 531.80127 1062.59526 1062.59273 2.38 0.00127 0/0 0 0 27391110 HCD 30 MS2 25.11185 1101.8 72.728 55.1952 15452 15452 15444 QEplus033719.raw F4 1152.3 1027.2 1246.8 832.3 1241.7 1110.7 266 2.87 1 FALSE 1.14E-05 0.0001538 0.821 -250 67496 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYREELKR [R].vYREELkR.[D] N-Term(TMT6plex); K7(TMT6plex) 6 B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 Q4FK88; Q3US43; Q4FJV4; Q3U5N9; A0A494BBD8; B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 2 3 3 0.2313 0 1 1 1 517.65277 1550.94376 1550.94188 1.21 0.00063 0/0 0 0 26093630 HCD 30 MS2 29.6738 885.3 52.149 55.1975 15453 15453 15444 QEplus033719.raw F4 841.7 1235.2 1053.7 596.5 855.7 728.9 385 2.94 1 FALSE 0.001108 0.01434 0.341 -250 67503 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSDLSHVQNK [K].dSDLSHVQNk.[S] N-Term(TMT6plex); K10(TMT6plex) 8 A0A0R4J259 Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1 G3UZI2; G3XA76; G3UWM1; G3V018; G3UXJ6; Q7TMK9; A0A0R4J259; Q7TMK9-2 Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q (Fragment) OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q (Fragment) OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip 0 3 3 0.7216 0 1 1 1 534.29547 1600.87186 1600.86951 1.47 0.00079 0/0 0 0 19831144 HCD 30 MS2 37.30725 1053.7 87.093 55.1997 15454 15454 15444 QEplus033719.raw F4 1236.8 939.8 1121.8 844.4 1281.6 898 355 4.49 1 FALSE 1.14E-05 7.06E-09 1.646 -250 67523 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYDPVAAR [K].eYDPVAAR.[Q] N-Term(TMT6plex) 1 Q3U4H0 APC-binding protein EB1 OS=Mus musculus OX=10090 GN=Mapre1 PE=1 SV=1 Q3U4H0 APC-binding protein EB1 OS=Mus musculus OX=10090 GN=Mapre1 PE=1 SV=1 0 2 2 0.5681 0 1 1 1 575.30902 1149.61077 1149.61015 0.53 0.00031 0/0 0 0 24747852 HCD 30 MS2 50.35541 1364 63.218 55.2138 15459 15459 15455 QEplus033719.raw F4 1787.2 948.5 1293.7 1252.1 1702.9 1199.6 237 3.01 1 FALSE 1.14E-05 0.0008477 0.677 -250 67562 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FGSQASQK [K].fGSQASQk.[AF] N-Term(TMT6plex); K8(TMT6plex) 8 Q3TGS9 ADP-ribosylation factor GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Arfgap1 PE=1 SV=1 Q9EPJ9-2; Q3TGS9; V9GXM1; Q6PB94; Q05BC5; Q9EPJ9; Q05DE0; V9GWV1 Isoform 2 of ADP-ribosylation factor GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Arfgap1; ADP-ribosylation factor GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Arfgap1 PE=1 SV=1; ADP-ribosylation factor GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Arfgap1 PE=1 SV=1; Arfgap1 protein OS=Mus musculus OX=10090 GN=Arfgap1 PE=2 SV=1; Arfgap1 protein OS=Mus musculus OX=10090 GN=Arfgap1 PE=2 SV=1; ADP-ribosylation factor GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Arfgap1 PE=1 SV=2; Arfgap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Arfgap1 PE=2 SV=1; ADP-ribosylation factor GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Arfgap1 PE=1 SV=1 0 2 2 0.417 0 1 1 1 655.8772 1310.74712 1310.74687 0.19 0.00012 0/0 0 0 9078754 HCD 30 MS2 19.15114 724.7 110 55.226 15464 15464 15455 QEplus033719.raw F4 770 560.6 751.7 609 944.9 712.2 306 2.35 1 FALSE 3.35E-05 0.00117 0.648 -250 67572 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREEQAEPDGTEVADK [K].qREEQAEPDGTEVADk.[AT] N-Term(TMT6plex); K16(TMT6plex) 11 Q5SX40; P13541; Q5SX39; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; Q3UUB1; B2RWX0; Q8BLW0; I6L963; B1AR69; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 2 2 0.7521 0 1 1 1 1130.57874 2260.15019 2260.14574 1.97 0.00223 0/0 0 0 4781311 HCD 30 MS2 0 184.3 110 55.2286 15465 15465 15455 QEplus033719.raw F4 225.3 10.4 120.5 408.4 12.3 328.7 263 4.72 4 FALSE 1.14E-05 8.32E-13 2.392 -250 67577 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NFQANTK [R].nFQANTk.[G] N-Term(TMT6plex); K7(TMT6plex) 3 A2ALF2 "DnaJ (Hsp40) homolog, subfamily C, member 8 OS=Mus musculus OX=10090 GN=Dnajc8 PE=1 SV=1" A2ALF2; A2ALF0; A2ALF3 "DnaJ (Hsp40) homolog, subfamily C, member 8 OS=Mus musculus OX=10090 GN=Dnajc8 PE=1 SV=1; DnaJ homolog subfamily C member 8 OS=Mus musculus OX=10090 GN=Dnajc8 PE=1 SV=1; DnaJ homolog subfamily C member 8 OS=Mus musculus OX=10090 GN=Dnajc8 PE=1 SV=1" 0 2 2 0.2591 0 1 1 1 640.87292 1280.73857 1280.73631 1.77 0.00113 0/0 0 0 5388449.5 HCD 30 MS2 16.62135 610.1 110 55.2359 15467 15467 15466 QEplus033719.raw F4 685.6 526.3 579.8 476.5 785.2 607 337 2.2 1 FALSE 0.0008805 0.0123 0.369 -250 67586 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DPSVVVR [K].dPSVVVR.[D] N-Term(TMT6plex) 4 Q3TFE8 Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1 Q3TFE8; Q7TSZ6; Q3UHW8; P70168 Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1; Karyopherin (Importin) beta 1 OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1; Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1; Importin subunit beta-1 OS=Mus musculus OX=10090 GN=Kpnb1 PE=1 SV=2 0 2 2 0.5048 0 1 1 1 500.80289 1000.5985 1000.59886 -0.36 -0.00018 0/0 0 0 51465416 HCD 30 MS2 30.443 524.9 16.596 55.2429 15470 15470 15466 QEplus033719.raw F4 529.6 462.7 607.7 366.8 664.4 518.3 196 2.08 1 FALSE 0.0007998 0.01113 0.386 -250 67589 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVRPGYPK [K].aVRPGYPk.[L] N-Term(TMT6plex); K8(TMT6plex) 1 Q3ZBS7 TREMBL:Q3ZBS7 (Bos taurus) Vitronectin Q3ZBS7 TREMBL:Q3ZBS7 (Bos taurus) Vitronectin 0 3 3 0.511 0 1 1 1 449.28406 1345.83762 1345.83563 1.48 0.00066 0/0 0 0 23098558 HCD 30 MS2 33.38596 935.3 42.404 55.2452 15471 15471 15466 QEplus033719.raw F4 784.1 797.6 1125 825.6 1042.6 1037.1 367 2.72 1 TRUE 0.0005848 0.008741 0.426 -250 67599 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HFVDEK [R].hFVDEk.[A] N-Term(TMT6plex); K6(TMT6plex) 4 P58389 Serine/threonine-protein phosphatase 2A activator OS=Mus musculus OX=10090 GN=Ptpa PE=1 SV=1 Q8C0E1; A2AWE9; P58389; F6Z6I0 Serine/threonine-protein phosphatase 2A activator OS=Mus musculus OX=10090 GN=Ptpa PE=2 SV=1; Serine/threonine-protein phosphatase 2A activator OS=Mus musculus OX=10090 GN=Ptpa PE=1 SV=1; Serine/threonine-protein phosphatase 2A activator OS=Mus musculus OX=10090 GN=Ptpa PE=1 SV=1; Serine/threonine-protein phosphatase 2A activator (Fragment) OS=Mus musculus OX=10090 GN=Ptpa PE=1 SV=1 0 3 3 0.3736 0 1 1 1 411.5733 1232.70536 1232.70394 1.15 0.00047 0/0 0 0 20059474 HCD 30 MS2 68.34704 665.9 32.686 55.2474 15472 15472 15466 QEplus033719.raw F4 751.8 410.6 632.4 590.2 785 825.2 345 2.65 1 FALSE 0.001248 0.0169 0.311 -250 67602 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQLGQDEGK [K].aQLGQDEGk.[Q] N-Term(TMT6plex); K9(TMT6plex) 7 Q8C2D1 "Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1" Q3U890; A0A494BAV2; Q8C2D1; Q61035; Q8VDX8; Q3UDH1; Q9D094 "Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Hars PE=1 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars1 PE=1 SV=2; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1" 0 2 2 0.6618 0 1 1 1 702.39905 1403.79082 1403.78946 0.97 0.00068 0/0 0 0 17329996 HCD 30 MS2 10.16559 772.6 110 55.2499 15473 15473 15466 QEplus033719.raw F4 803.8 707.3 775.1 629.4 948.1 771.8 390 3.4 1 FALSE 1.14E-05 1.75E-06 1.191 -250 67617 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLSAQEEK [K].sLSAQEEk.[I] N-Term(TMT6plex); K8(TMT6plex) 11 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" Q3URW8; B9EKJ1; E9Q447; B2RXX6; A3KGU9; Q3V1V5; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.5211 0 1 1 1 675.38885 1349.77043 1349.76767 2.05 0.00138 0/0 0 0 15016847 HCD 30 MS2 6.478038 979.9 110 55.2547 15475 15475 15466 QEplus033719.raw F4 1102.9 763.5 1037.9 833.9 1032 1109.3 486 3.55 2 FALSE 1.14E-05 0.0001088 0.85 -250 67625 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYDSHSLK [R].aYDSHSLk.[Q] N-Term(TMT6plex); K8(TMT6plex) 1 Q8K363 ATP-dependent RNA helicase DDX18 OS=Mus musculus OX=10090 GN=Ddx18 PE=1 SV=1 Q8K363 ATP-dependent RNA helicase DDX18 OS=Mus musculus OX=10090 GN=Ddx18 PE=1 SV=1 0 3 3 0.4595 0 1 1 1 460.26218 1378.77198 1378.77309 -0.8 -0.00037 0/0 0 0 13090512 HCD 30 MS2 35.61931 1010.1 110 55.2572 15476 15476 15466 QEplus033719.raw F4 918.7 1002.7 1138.9 740.6 1249.3 1010.5 439 3.33 1 FALSE 1.14E-05 0.000201 0.799 -250 67642 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIAQYAR [R].tIAQYAR.[E] N-Term(TMT6plex) 3 Q9WUB3 "Glycogen phosphorylase, muscle form OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=3" E9PUM3; Q9CTZ0; Q9WUB3 "Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=1; Alpha-1,4 glucan phosphorylase (Fragment) OS=Mus musculus OX=10090 GN=Pygm PE=2 SV=1; Glycogen phosphorylase, muscle form OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=3" 0 2 2 0.4264 0 1 1 1 526.31049 1051.6137 1051.60976 3.74 0.00197 0/0 0 0 17095714 HCD 30 MS2 72.74972 1425.6 57.405 55.2668 15479 15479 15477 QEplus033719.raw F4 2081.7 834.2 1416.2 1570.9 926.6 1724 132 1.97 1 FALSE 0.002705 0.05404 0.13 -250 67651 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GKLEEQKPER [K].gkLEEQkPER.[V] N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex) 2 P63028 Translationally-controlled tumor protein OS=Mus musculus OX=10090 GN=Tpt1 PE=1 SV=1 D3YU75; P63028 Translationally-controlled tumor protein OS=Mus musculus OX=10090 GN=Tpt1 PE=1 SV=1; Translationally-controlled tumor protein OS=Mus musculus OX=10090 GN=Tpt1 PE=1 SV=1 1 3 3 0.5685 0 1 1 1 634.38611 1901.14377 1901.14232 0.76 0.00048 0/0 0 0 56012336 HCD 30 MS2 6.222023 786.4 36.642 55.269 15480 15480 15477 QEplus033719.raw F4 837.4 584.8 861.4 610.4 913.9 910.5 353 1.97 1 FALSE 5.44E-05 0.001729 0.612 -250 67658 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREEQAEPDGTEVADK [K].qREEQAEPDGTEVADk.[AT] N-Term(TMT6plex); K16(TMT6plex) 11 Q5SX40; P13541; Q5SX39; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; Q3UUB1; B2RWX0; Q8BLW0; I6L963; B1AR69; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 4 4 0.7993 0 1 1 1 565.79224 2260.14712 2260.14574 0.61 0.00034 0/0 0 0 38532964 HCD 30 MS2 9.486101 533.8 33.587 55.2713 15481 15481 15477 QEplus033719.raw F4 606.5 173.1 415.9 1011.5 219.9 776.1 260 5.38 4 FALSE 1.14E-05 1.82E-07 1.378 -250 67690 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQSIAPK [K].dQSIAPk.[T] N-Term(TMT6plex); K7(TMT6plex) 4 Q3U505 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Rpn2 PE=2 SV=1 Q3U505; Q9DBG6; A2ACG7; Q61833 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Rpn2 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Mus musculus OX=10090 GN=Rpn2 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Mus musculus OX=10090 GN=Rpn2 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Mus musculus OX=10090 GN=Rpn2 PE=2 SV=1 0 2 2 0.3279 0 1 1 1 608.8692 1216.73113 1216.73016 0.8 0.00048 0/0 0 0 20679360 HCD 30 MS2 28.97371 1190.5 89.77 55.2803 15485 15485 15477 QEplus033719.raw F4 1180.5 926.7 1226.8 945.7 1579.3 1283.7 409 2.44 1 FALSE 0.00131 0.01789 0.301 -250 67725 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDRPELTGAK [K].sDRPELTGAk.[V] N-Term(TMT6plex); K10(TMT6plex) 1 Q99LC5 "Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Etfa PE=1 SV=2" Q99LC5 "Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Etfa PE=1 SV=2" 0 3 3 0.58 0 1 1 1 511.30008 1531.88568 1531.88443 0.82 0.00042 0/0 0 0 46102420 HCD 30 MS2 17.93842 1096.4 36.134 55.2971 15491 15491 15488 QEplus033719.raw F4 1245.4 888.7 1209.2 1020.3 1014.4 1200.4 494 3 1 FALSE 1.14E-05 0.0009576 0.666 -250 67751 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YGIEEHGK [K].yGIEEHGk.[V] N-Term(TMT6plex); K8(TMT6plex) 2 Q7TMQ1 Gap junction protein OS=Mus musculus OX=10090 GN=Gja1 PE=2 SV=1 Q7TMQ1; P23242 Gap junction protein OS=Mus musculus OX=10090 GN=Gja1 PE=2 SV=1; Gap junction alpha-1 protein OS=Mus musculus OX=10090 GN=Gja1 PE=1 SV=2 0 3 3 0.5829 0 1 1 1 464.26215 1390.77188 1390.77309 -0.86 -0.0004 0/0 0 0 8007627.5 HCD 30 MS2 27.62095 728.6 110 55.3069 15495 15495 15488 QEplus033719.raw F4 794.7 640.9 734.1 590 835.1 777.1 360 3.86 1 FALSE 1.14E-05 4.87E-05 0.917 -250 67756 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLQAAGNAVK [K].rLQAAGNAVk.[R] N-Term(TMT6plex); K10(TMT6plex) 10 A0A1L1SQ51; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1;Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; A0A1L1SQ51; B2RY15; Q6PB69; Q8CDM9; Q0V930; Q3UHS6; Q3TBC3; E9PUM4; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Tln2 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 1 2 2 0.5505 0 1 1 1 743.46631 1485.92534 1485.92657 -0.83 -0.00061 0/0 0 0 7911110 HCD 30 MS2 8.252461 286.6 110 55.3094 15496 15496 15488 QEplus033719.raw F4 302.5 262.1 295.1 209.2 375.8 274.6 267 2.87 2 FALSE 1.14E-05 9.07E-05 0.865 -250 67773 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGPTGATGDK [K].vGPTGATGDk.[G] N-Term(TMT6plex); K10(TMT6plex) 1 Q3U962 Collagen alpha-2(V) chain OS=Mus musculus OX=10090 GN=Col5a2 PE=1 SV=1 Q3U962 Collagen alpha-2(V) chain OS=Mus musculus OX=10090 GN=Col5a2 PE=1 SV=1 0 2 2 0.5788 0 1 1 1 680.89618 1360.78508 1360.78365 1.05 0.00072 0/0 0 0 7230040.5 HCD 30 MS2 14.00706 706.9 110 55.3144 15498 15498 15488 QEplus033719.raw F4 714.5 605 761.1 595.6 813.1 752.1 486 3.11 1 FALSE 1.14E-05 9.85E-07 1.239 -250 67780 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HNFTPLAR [K].hNFTPLAR.[V] N-Term(TMT6plex) 2 Q8BWT1 "3-ketoacyl-CoA thiolase, mitochondrial OS=Mus musculus OX=10090 GN=Acaa2 PE=1 SV=3" Q3UKH3; Q8BWT1 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Acaa2 PE=2 SV=1; 3-ketoacyl-CoA thiolase, mitochondrial OS=Mus musculus OX=10090 GN=Acaa2 PE=1 SV=3" 0 2 2 0.4833 0 1 1 1 592.84119 1184.6751 1184.67376 1.13 0.00067 0/0 0 0 7893413.5 HCD 30 MS2 9.944001 726.1 110 55.3217 15500 15500 15499 QEplus033719.raw F4 747.5 608.4 755.8 732.3 753 759.4 204 2.4 1 FALSE 0.002249 0.04429 0.16 -250 67788 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLPGGQPPPR [R].tLPGGQPPPR.[V] N-Term(TMT6plex) 1 Q9R0E1 Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Mus musculus OX=10090 GN=Plod3 PE=1 SV=1 Q9R0E1 Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Mus musculus OX=10090 GN=Plod3 PE=1 SV=1 0 2 2 0.4336 0 1 1 1 624.86945 1248.73161 1248.72619 4.35 0.00271 0/0 0 0 5366373.5 HCD 30 MS2 65.7093 755.9 110 55.3242 15501 15501 15499 QEplus033719.raw F4 778.9 717.6 793.7 566.7 988.7 689.8 522 2.26 1 FALSE 1.14E-05 0.0005826 0.709 -250 67795 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FQESEERPK [R].fQESEERPk.[L] N-Term(TMT6plex); K9(TMT6plex) 4 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 0 3 3 0.7139 0 1 1 1 536.63184 1607.88095 1607.87934 1 0.00054 0/0 0 0 56048340 HCD 30 MS2 18.90274 814.1 27.761 55.3265 15502 15502 15499 QEplus033719.raw F4 862.3 637.3 872.7 774.3 791.3 946.9 412 3.67 1 FALSE 1.14E-05 2.71E-06 1.155 -250 67801 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FESVAR [K].fESVAR.[E] N-Term(TMT6plex) 3 F8WHM5 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 F8WHM5; Q61543; E9PWD8 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 0 2 2 0.2258 0 1 1 1 469.27032 937.53337 937.53045 3.12 0.00146 0/0 0 0 37830404 HCD 30 MS2 42.84763 960.6 29.634 55.3288 15503 15503 15499 QEplus033719.raw F4 1094 855.3 1053.9 695.4 1073.7 991.5 135 2.17 1 FALSE 0.002334 0.04647 0.153 -250 67806 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSETTDPDKR [K].lSETTDPDkR.[Q] N-Term(TMT6plex); K9(TMT6plex) 3 Q3UXN3 Cysteinyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1 Q3UXN3; Q9ER72; Q3U716 "Cysteinyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1; Cysteine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Cars1 PE=1 SV=2; Cysteinyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1" 1 3 3 0.5964 0 1 1 1 540.63898 1619.90238 1619.90047 1.18 0.00064 0/0 0 0 27814998 HCD 30 MS2 43.77649 939.4 55.245 55.331 15504 15504 15499 QEplus033719.raw F4 982.8 890.8 1036.2 724.9 1088.8 912.9 451 2.75 1 FALSE 1.14E-05 0.0003517 0.752 -250 67812 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCGQTVHDEVANK [K].ncGQTVHDEVANk.[Q] N-Term(TMT6plex); C2(Carbamidomethyl); K13(TMT6plex) 4 Q99LI8 Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=2 Q99LI8; B1ATY9; Q3UMA3; Q3TLL4 Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=2; Hepatocyte growth factor-regulated tyrosine kinase substrate (Fragment) OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=1; Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=1; Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=2 SV=1 0 3 3 0.8022 0 1 1 1 644.00018 1929.986 1929.98528 0.37 0.00024 0/0 0 0 17899000 HCD 30 MS2 4.735804 551.5 110 55.3335 15505 15505 15499 QEplus033719.raw F4 584.3 440.4 622.4 518.4 542.9 600.7 256 6.42 1 FALSE 1.14E-05 2.43E-14 2.683 -250 67819 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLESINSR [K].sLESINSR.[L] N-Term(TMT6plex) 3 P62889 60S ribosomal protein L30 OS=Mus musculus OX=10090 GN=Rpl30 PE=1 SV=2 Q497D7; Q5PR15; P62889 60S ribosomal protein L30 OS=Mus musculus OX=10090 GN=Rpl30 PE=2 SV=1; 60S ribosomal protein L30 OS=Mus musculus OX=10090 GN=Rpl30 PE=2 SV=1; 60S ribosomal protein L30 OS=Mus musculus OX=10090 GN=Rpl30 PE=1 SV=2 0 2 2 0.5317 0 1 1 1 567.81775 1134.62822 1134.63162 -2.99 -0.0017 0/0 0 0 13952875 HCD 30 MS2 49.34324 1331.8 110 55.336 15506 15506 15499 QEplus033719.raw F4 1465.6 1066.4 1442.9 1208.3 1366.4 1441.2 210 2.52 1 FALSE 0.0007816 0.01087 0.39 -250 67834 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMSGDVK [K].eMSGDVk.[D] N-Term(TMT6plex); K7(TMT6plex) 6 P14824; Q99JX6 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3;Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 P14824; F8WIT2; Q3UI56; Q3TUI1; Q99JX6; Q3UDK4 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 0 3 3 0.4131 0 1 1 1 408.56198 1223.67139 1223.67059 0.65 0.00027 0/0 0 0 10052293 HCD 30 MS2 63.02126 619.2 68.504 55.3405 15508 15508 15499 QEplus033719.raw F4 708.5 458.7 620.6 693.2 658.2 575.9 317 2.59 2 FALSE 0.001719 0.02891 0.222 -250 67849 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLMHGK [R].lLmHGk.[E] N-Term(TMT6plex); M3(Oxidation); K6(TMT6plex) 19 Q61990; P60335; P57722 Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1;Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1;Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3 A0A2R8VHY9; Q61990; Q61990-3; A0A2R8VI71; A0A2R8VHI3; A0A2R8VI25; Q3TF69; B2M1R7; A0A2R8VHN3; Q61990-2; A0A2R8W6L5; Q8CFQ6; P60335; Q3TT81; P57722; A0A2R8VI12; A0A2R8VHP9; P57722-2; E9Q7D8 Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 3 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pcbp2 PE=2 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Pcbp3 protein OS=Mus musculus OX=10090 GN=Pcbp3 PE=2 SV=1; Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3; Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=1 0 3 3 0.1592 0 1 1 1 391.57922 1172.72312 1172.72257 0.47 0.00018 0/0 0 0 6924310.5 HCD 30 MS2 62.31223 659.9 110 55.3503 15511 15511 15510 QEplus033719.raw F4 676.7 510.2 716.2 456.3 808 792.2 267 2.01 3 FALSE 0.008343 0.1447 -0.081 -250 67857 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLKPSTPR [K].dLkPSTPR.[S] N-Term(TMT6plex); K3(TMT6plex) 7 Q5SQB7 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1 Q5SQB7; Q8BSZ3; Q5BL09; Q5U438; Q9DAY9; Q5SQB5; Q3U536 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Npm1 protein OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1 0 2 2 0.4526 0 1 1 1 686.4223 1371.83733 1371.83602 0.95 0.00065 0/0 0 0 39199076 HCD 30 MS2 5.051711 453.7 57.592 55.3526 15512 15512 15510 QEplus033719.raw F4 461.2 467.9 506.4 296.9 540 449.6 266 2.32 1 FALSE 0.0023 0.04533 0.156 -250 67862 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVPTGDASK [R].aVPTGDASk.[C] N-Term(TMT6plex); K9(TMT6plex) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.4522 0 1 1 1 652.38477 1303.76225 1303.76219 0.05 0.00003 0/0 0 0 60341256 HCD 30 MS2 8.646013 912.1 35.176 55.3549 15513 15513 15510 QEplus033719.raw F4 928.8 876.3 822 631.3 1407 807.1 515 2.72 1 FALSE 1.14E-05 1.57E-05 1.01 -250 67871 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVAEDDEDDDVDTK [K].rVAEDDEDDDVDTk.[K] N-Term(TMT6plex); K14(TMT6plex) 6 Q8C2T3 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1 Q8C2T3; P26350; Q3U8X6; Q3U6E4; Q8CAQ5; Q3UA54 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Prothymosin alpha OS=Mus musculus OX=10090 GN=Ptma PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1 1 3 3 0.7434 0 1 1 1 694.00812 2080.0098 2080.00824 0.75 0.00052 0/0 0 0 41889052 HCD 30 MS2 10.9384 825.2 106.244 55.3573 15514 15514 15510 QEplus033719.raw F4 874.6 971.2 791.3 349.4 1363.1 601.8 170 6.78 1 FALSE 1.14E-05 6.31E-16 3.495 -250 67883 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMFTNQDR [K].nMFTNQDR.[N] N-Term(TMT6plex) 1 Q9Z247 Peptidyl-prolyl cis-trans isomerase FKBP9 OS=Mus musculus OX=10090 GN=Fkbp9 PE=1 SV=1 Q9Z247 Peptidyl-prolyl cis-trans isomerase FKBP9 OS=Mus musculus OX=10090 GN=Fkbp9 PE=1 SV=1 0 2 2 0.648 0 1 1 1 627.80957 1254.61186 1254.60984 1.62 0.00101 0/0 0 0 16707449 HCD 30 MS2 33.78354 1085.2 110 55.3643 15517 15517 15510 QEplus033719.raw F4 1112.4 944.9 1141.4 830.6 1432.5 1049.1 87 3.21 1 FALSE 1.14E-05 0.0002591 0.778 -250 67887 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGPLTGNYR [R].gGPLTGNYR.[L] N-Term(TMT6plex) 1 Q9D6N1 Carbonic anhydrase 13 OS=Mus musculus OX=10090 GN=Ca13 PE=1 SV=1 Q9D6N1 Carbonic anhydrase 13 OS=Mus musculus OX=10090 GN=Ca13 PE=1 SV=1 0 2 2 0.5705 0 1 1 1 582.32251 1163.63774 1163.63704 0.61 0.00035 0/0 0 0 15484626 HCD 30 MS2 16.86362 1157.4 110 55.3668 15518 15518 15510 QEplus033719.raw F4 1172.4 1144.6 1190.5 761.6 1734.2 941.4 305 3.05 1 FALSE 1.14E-05 2.95E-05 0.958 -250 67904 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVEHILR [R].qVEHILR.[C] N-Term(TMT6plex) 7 D6RCW9 Thymidylate synthase OS=Mus musculus OX=10090 GN=Tyms PE=1 SV=1 D6RCW9; A0A0G2JF03; P07607; Q9D0H1; A0A0G2JF31; Q8VDV6; A0A0G2JGG2 Thymidylate synthase OS=Mus musculus OX=10090 GN=Tyms PE=1 SV=1; Thymidylate synthase (Fragment) OS=Mus musculus OX=10090 GN=Tyms PE=1 SV=1; Thymidylate synthase OS=Mus musculus OX=10090 GN=Tyms PE=1 SV=1; Thymidylate synthase OS=Mus musculus OX=10090 GN=Tyms PE=2 SV=1; Thymidylate synthase (Fragment) OS=Mus musculus OX=10090 GN=Tyms PE=1 SV=1; Thymidylate synthase OS=Mus musculus OX=10090 GN=Tyms PE=2 SV=1; Thymidylate synthase OS=Mus musculus OX=10090 GN=Tyms PE=1 SV=1 0 3 3 0.3781 0 1 1 1 375.23267 1123.68344 1123.67851 4.39 0.00165 0/0 0 0 13019970 HCD 30 MS2 33.89884 597 74.529 55.3716 15520 15520 15510 QEplus033719.raw F4 681.6 389 578.4 461.3 622.2 849.8 122 3.2 1 FALSE 0.001248 0.01686 0.311 -250 67911 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASFNHFDR [R].aSFNHFDR.[RDK-] N-Term(TMT6plex) 10 O88990; A1BN54; Q9JI91; Q7TPR4 Alpha-actinin-3 OS=Mus musculus OX=10090 GN=Actn3 PE=2 SV=1;Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1;Alpha-actinin-2 OS=Mus musculus OX=10090 GN=Actn2 PE=1 SV=2;Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 Q9CTH3; Q99LJ3; Q5FW75; O88990; A1BN54; Q9JI91; A0A1Y7VMW4; Q7TPR4; Q3UYE4; Q8K3Q4 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actn2 PE=2 SV=1; Actn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Actn1 PE=2 SV=1; Actinin alpha 2 OS=Mus musculus OX=10090 GN=Actn2 PE=2 SV=1; Alpha-actinin-3 OS=Mus musculus OX=10090 GN=Actn3 PE=2 SV=1; Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1; Alpha-actinin-2 OS=Mus musculus OX=10090 GN=Actn2 PE=1 SV=2; Alpha-actinin-2 (Fragment) OS=Mus musculus OX=10090 GN=Actn2 PE=1 SV=2; Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actn3 PE=2 SV=1; Actinin alpha 2 OS=Mus musculus OX=10090 GN=Actn2 PE=2 SV=1 0 3 3 0.5185 0 1 1 1 408.21066 1222.61744 1222.61664 0.65 0.00027 0/0 0 0 8899210 HCD 30 MS2 53.9812 676.6 106.722 55.3789 15522 15522 15521 QEplus033719.raw F4 749.6 509 702.8 737.4 722.2 638.7 126 2.97 4 FALSE 5.44E-05 0.00178 0.61 -250 67919 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSLEEEK [K].gSLEEEk.[R] N-Term(TMT6plex); K7(TMT6plex) 4 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 Q3TH77; E9Q7G0; A0A1B0GT61; A0A1B0GSW3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Numa1 PE=2 SV=1; Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1; Nuclear mitotic apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1; Nuclear mitotic apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 0 2 2 0.0891 0 1 1 1 625.35687 1249.70647 1249.704 1.97 0.00123 0/0 0 0 8040307 HCD 30 MS2 33.18828 1098.4 110 55.3814 15523 15523 15521 QEplus033719.raw F4 1146.2 1081.3 1140.6 853.3 1429.5 939.4 410 2.02 1 FALSE 0.003182 0.06275 0.107 -250 67927 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTHFVEGGDAGNREDQINR [K].tTHFVEGGDAGNREDQINR.[L] N-Term(TMT6plex) 3 P14148 60S ribosomal protein L7 OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=2 P14148; Q3TK73; Q3UBI6 60S ribosomal protein L7 OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl7 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl7 PE=2 SV=1 1 4 4 0.8004 0 1 1 1 587.04163 2345.14467 2345.14316 0.64 0.00038 0/0 0 0 53701716 HCD 30 MS2 14.79469 143.9 23.183 55.3859 15525 15525 15521 QEplus033719.raw F4 159.4 109.2 154.2 128.5 159.8 152.3 173 4.81 1 FALSE 1.14E-05 2.22E-07 1.361 -250 67932 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VASPALR [K].vASPALR.[A] N-Term(TMT6plex) 2 Q4FJZ2 Importin subunit alpha OS=Mus musculus OX=10090 GN=Kpna6 PE=1 SV=1 Q4FJZ2; Q8BH30 Importin subunit alpha OS=Mus musculus OX=10090 GN=Kpna6 PE=1 SV=1; Importin subunit alpha OS=Mus musculus OX=10090 GN=Kpna6 PE=1 SV=1 0 2 2 0.3277 0 1 1 1 471.80106 942.59484 942.59338 1.54 0.00073 0/0 0 0 18669900 HCD 30 MS2 26.28759 765.1 57.079 55.3882 15526 15526 15521 QEplus033719.raw F4 733.4 632.6 890.3 616.9 796.3 921.2 97 2.35 1 FALSE 0.002904 0.0572 0.122 -250 67937 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVPTGDASK [R].aVPTGDASk.[C] N-Term(TMT6plex); K9(TMT6plex) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.5954 0 1 1 1 435.25928 1303.76328 1303.76219 0.84 0.00036 0/0 0 0 16234647 HCD 30 MS2 16.67985 1038.4 110 55.3907 15527 15527 15521 QEplus033719.raw F4 1105.3 822.7 1029.9 849.7 1207.5 1215.4 513 3.46 1 FALSE 0.0006035 0.00891 0.423 -250 67947 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFEPEK [R].rFEPEk.[L] N-Term(TMT6plex); K6(TMT6plex) 5 B2RSH3 Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=2 SV=1 B2RSH3; A0A1L1SRV0; Q08091-2; A0A1L1SUB2; Q8CBQ2 Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=1 SV=1; Isoform Beta of Calponin-1 OS=Mus musculus OX=10090 GN=Cnn1; Calponin (Fragment) OS=Mus musculus OX=10090 GN=Cnn1 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=2 SV=1 1 3 3 0.3203 0 1 1 1 421.9209 1263.74814 1263.74614 1.58 0.00067 0/0 0 0 12835929 HCD 30 MS2 56.17069 819.3 81.751 55.3977 15530 15530 15521 QEplus033719.raw F4 838.4 674.2 762.7 502.3 1517.4 620.8 530 3.06 1 FALSE 0.0008183 0.0112 0.385 -250 67956 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTHFVEGGDAGNREDQINR [K].tTHFVEGGDAGNREDQINR.[L] N-Term(TMT6plex) 3 P14148 60S ribosomal protein L7 OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=2 P14148; Q3TK73; Q3UBI6 60S ribosomal protein L7 OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl7 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl7 PE=2 SV=1 1 3 3 0.805 0 1 1 1 782.38605 2345.14359 2345.14316 0.18 0.00014 0/0 0 0 6942686.5 HCD 30 MS2 6.836606 232.5 110 55.4002 15531 15531 15521 QEplus033719.raw F4 240.3 173.3 269.1 197.7 243.9 270.7 167 6 1 FALSE 1.14E-05 6.31E-16 3.141 -250 67959 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDIYGED [K].nDIYGED.[-] N-Term(TMT6plex) 6 Q3UPA3 Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1 Q3UUX9; Q3UPA3; Q3TIY6; Q61598-2; Q3UC72; Q61598 Rab GDP dissociation inhibitor OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Rab GDP dissociation inhibitor OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Isoform 2 of Rab GDP dissociation inhibitor beta OS=Mus musculus OX=10090 GN=Gdi2; Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Rab GDP dissociation inhibitor beta OS=Mus musculus OX=10090 GN=Gdi2 PE=1 SV=1 0 2 2 0.8632 0 1 1 1 527.74841 1054.48955 1054.48904 0.49 0.00026 0/0 0 0 13267105 HCD 30 MS2 30.17593 919 110 55.4075 15533 15533 15532 QEplus033719.raw F4 1014.4 573 916.9 993.5 879.3 1136.9 28 2.12 1 FALSE 0.005603 0.09437 0.022 -250 67965 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GKLEEQKPER [K].gkLEEQkPER.[V] N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex) 2 P63028 Translationally-controlled tumor protein OS=Mus musculus OX=10090 GN=Tpt1 PE=1 SV=1 D3YU75; P63028 Translationally-controlled tumor protein OS=Mus musculus OX=10090 GN=Tpt1 PE=1 SV=1; Translationally-controlled tumor protein OS=Mus musculus OX=10090 GN=Tpt1 PE=1 SV=1 1 2 2 0.6589 0 1 1 1 951.07727 1901.14726 1901.14232 2.6 0.00247 0/0 0 0 6472565.5 HCD 30 MS2 10.22029 252.1 110 55.41 15534 15534 15532 QEplus033719.raw F4 255.7 207.4 286.2 195.3 276.3 291.7 339 2.14 1 FALSE 0.0006035 0.008887 0.423 -250 67968 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQGDFVRK [R].qQGDFVRk.[L] N-Term(TMT6plex); K8(TMT6plex) 2 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 Q9DBT1; Q9CZD3 WHEP-TRS domain-containing protein OS=Mus musculus OX=10090 GN=F13a1 PE=2 SV=1; Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 1 3 3 0.6516 0 1 1 1 479.28503 1435.84055 1435.84217 -1.13 -0.00054 0/0 0 0 35382448 HCD 30 MS2 35.95579 1166.7 45.515 55.4123 15535 15535 15532 QEplus033719.raw F4 1275.7 1001.4 1311.1 956.1 1319.7 1136.1 383 3.1 1 FALSE 0.0002518 0.005248 0.495 -250 67974 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGVMSEK [R].sGVMSEk.[D] N-Term(TMT6plex); K7(TMT6plex) 3 Q3TI79 PUA domain-containing protein OS=Mus musculus OX=10090 GN=Dkc1 PE=2 SV=1 Q3TI79; Q3TM67; Q9ESX5 PUA domain-containing protein OS=Mus musculus OX=10090 GN=Dkc1 PE=2 SV=1; PUA domain-containing protein OS=Mus musculus OX=10090 GN=Dkc1 PE=2 SV=1; H/ACA ribonucleoprotein complex subunit DKC1 OS=Mus musculus OX=10090 GN=Dkc1 PE=1 SV=4 0 2 2 0.3853 0 1 1 1 598.34161 1195.67595 1195.67568 0.23 0.00014 0/0 0 0 12131819 HCD 30 MS2 39.04331 1285.9 110 55.4148 15536 15536 15532 QEplus033719.raw F4 1377.8 957.4 1260.1 1380.8 1381.8 1357.3 334 2.18 1 FALSE 0.0006383 0.009712 0.409 -250 67987 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCCSCCPVGCAK [K].sccSccPVGcAk.[C] N-Term(TMT6plex); C2(Carbamidomethyl); C3(Carbamidomethyl); C5(Carbamidomethyl); C6(Carbamidomethyl); C10(Carbamidomethyl); K12(TMT6plex) 3 P02798 Metallothionein-2 OS=Mus musculus OX=10090 GN=Mt2 PE=1 SV=2 P02798; Q6VEU6; P67983 Metallothionein-2 OS=Mus musculus OX=10090 GN=Mt2 PE=1 SV=2; Metallothionein OS=Mus musculus OX=10090 PE=2 SV=1; SWISS-PROT:P67983 (Bos taurus) Metallothionein-1A 0 2 2 1 0 1 1 1 952.42188 1903.83647 1903.83572 0.39 0.00038 0/0 0 0 11708435 HCD 30 MS2 20.07055 504.3 110 55.4196 15538 15538 15532 QEplus033719.raw F4 408.5 566.4 737.1 331.8 403.8 578.1 25 4.52 1 TRUE 1.14E-05 2.31E-10 1.928 -250 67995 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMPEEEK [K].nMPEEEk.[-Q] N-Term(TMT6plex); K7(TMT6plex) 4 Q91Z38 Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1 Q9CTZ9; Q91Z38; Q3TDF3; A2AJK8 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ttc1 PE=2 SV=1; Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Ttc1 PE=2 SV=1; Tetratricopeptide repeat protein 1 OS=Mus musculus OX=10090 GN=Ttc1 PE=1 SV=1 0 2 2 0.3661 0 1 1 1 667.85547 1334.70366 1334.70262 0.78 0.00052 0/0 0 0 10224670 HCD 30 MS2 29.05669 1009.3 110 55.4246 15540 15540 15532 QEplus033719.raw F4 1138.5 784 1052 847.8 1151.3 1082.3 278 2.24 1 FALSE 0.001134 0.01501 0.332 -250 68003 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARDYDAMGSQTK [R].aRDYDAMGSQTk.[F] N-Term(TMT6plex); K12(TMT6plex) 3 Q3UXP2 RuvB-like helicase OS=Mus musculus OX=10090 GN=Ruvbl2 PE=2 SV=1 Q3UXP2; A0A1B0GRW3; Q9WTM5 RuvB-like helicase OS=Mus musculus OX=10090 GN=Ruvbl2 PE=2 SV=1; RuvB-like helicase (Fragment) OS=Mus musculus OX=10090 GN=Ruvbl2 PE=1 SV=1; RuvB-like 2 OS=Mus musculus OX=10090 GN=Ruvbl2 PE=1 SV=3 1 3 3 0.755 0 1 1 1 600.98047 1800.92685 1800.93145 -2.55 -0.00153 0/0 0 0 9595583 HCD 30 MS2 31.08499 816.2 110 55.4271 15541 15541 15532 QEplus033719.raw F4 813.9 783.2 915.2 615.2 997.6 771.8 233 5.51 1 FALSE 1.14E-05 3.81E-11 2.077 -250 68008 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDRPELTGAK [K].sDRPELTGAk.[V] N-Term(TMT6plex); K10(TMT6plex) 1 Q99LC5 "Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Etfa PE=1 SV=2" Q99LC5 "Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Etfa PE=1 SV=2" 0 2 2 0.3738 0 1 1 1 766.44562 1531.88396 1531.88443 -0.31 -0.00023 0/0 0 0 5866603 HCD 30 MS2 9.822783 429.4 110 55.4296 15542 15542 15532 QEplus033719.raw F4 455.8 335.4 442.6 401.5 430.5 510.6 465 2.06 1 FALSE 2.26E-05 0.001001 0.662 -250 68014 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYQQNYQNSESGEK [R].nYQQNYQNSESGEk.[N] N-Term(TMT6plex); K14(TMT6plex) 6 Q810K5 Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 A2BGG7; Q810K5; Q60950; P62960; Q71V06; Q60951 Y-box-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=1; Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1a OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Y-box-binding protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=3; Y box transcription factor (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1b OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 0 2 2 0.8283 0 1 1 1 1074.02502 2147.04277 2147.04055 1.04 0.00111 0/0 0 0 7769699 HCD 30 MS2 0 279.4 110 55.4395 15545 15545 15543 QEplus033719.raw F4 287.9 293.2 320.2 209.1 337.3 228.7 123 5.3 1 FALSE 1.14E-05 1.35E-15 2.922 -250 68027 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLSHGK [K].lLSHGk.[K] N-Term(TMT6plex); K6(TMT6plex) 2 P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 Q3UFI4; P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=2 SV=1; 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 0 3 3 0.2719 0 1 1 2 371.57813 1112.71982 1112.7192 0.56 0.00021 0/0 0 0 40261780 HCD 30 MS2 22.46033 764.8 39.705 55.444 15547 15547 15543 QEplus033719.raw F4 1112.3 473.5 873.6 836.1 543.5 749.5 107 3.2 1 FALSE 0.001057 0.01364 0.35 -250 68037 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTNVDVK [K].gTNVDVk.[V] N-Term(TMT6plex); K7(TMT6plex) 1 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 0 2 2 0.2824 0 1 1 1 595.86206 1190.71684 1190.71451 1.96 0.00117 0/0 0 0 39613592 HCD 30 MS2 33.16033 876.3 22.815 55.4463 15548 15548 15543 QEplus033719.raw F4 963.5 766.2 920.2 741.6 1098.7 767.7 447 2.16 1 FALSE 0.0008268 0.01153 0.38 -250 68045 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYQQNYQNSESGEK [R].nYQQNYQNSESGEk.[N] N-Term(TMT6plex); K14(TMT6plex) 6 Q810K5 Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 A2BGG7; Q810K5; Q60950; P62960; Q71V06; Q60951 Y-box-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=1; Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1a OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Y-box-binding protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=3; Y box transcription factor (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1b OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 0 3 3 0.8571 0 1 1 1 716.35223 2147.04215 2147.04055 0.75 0.00053 0/0 0 0 33930160 HCD 30 MS2 3.175136 678.2 110 55.4488 15549 15549 15543 QEplus033719.raw F4 657.5 669.7 740.8 534 874.2 592.9 123 6.65 1 FALSE 1.14E-05 6.49E-11 2.033 -250 68062 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLAAEEEAAR [R].sLAAEEEAAR.[Q] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5039 0 1 1 1 638.34155 1275.67583 1275.67421 1.27 0.00081 0/0 0 0 29028280 HCD 30 MS2 4.281561 914.1 110 55.4536 15551 15551 15543 QEplus033719.raw F4 955.9 781.6 961.2 792.4 1024 969.4 242 3.85 2 FALSE 1.14E-05 1.00E-07 1.427 -250 68069 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETIEQEK [K].eTIEQEk.[EQR] N-Term(TMT6plex); K7(TMT6plex) 6 P20065 Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x PE=1 SV=1 Q9D2R9; A2AEH9; P20065-2; P20065; A6H6H4; P21752 Thymosin beta OS=Mus musculus OX=10090 GN=Tmsb15a PE=2 SV=1; Thymosin beta 15a OS=Mus musculus OX=10090 GN=Tmsb15a PE=3 SV=1; Isoform Short of Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x; Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x PE=1 SV=1; Thymosin beta OS=Mus musculus OX=10090 GN=Tmsb10 PE=1 SV=1; SWISS-PROT:P21752 (Bos taurus) Thymosin beta-9 0 2 2 0.2794 0 1 1 1 667.88281 1334.75835 1334.75677 1.18 0.00079 0/0 0 0 14508200 HCD 30 MS2 38.61844 1372.1 110 55.4561 15552 15552 15543 QEplus033719.raw F4 1663.6 1048 1363.2 1170.1 1509.2 1478.3 463 2.72 1 TRUE 0.0003496 0.006795 0.462 -250 68075 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYGLVEGDDRR [R].gYGLVEGDDRR.[Q] N-Term(TMT6plex) 10 E9Q3Z5 Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1 Q99KQ8; E9Q3Z5; E3VVQ8; Q7TMJ2; F6R6A4; Q8K4L2; Q8K4L3; Q8K4L3-3; Q3TTX5; A0A1B0GS91 Svil protein (Fragment) OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin muscle-specific isoform OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1; Svil protein (Fragment) OS=Mus musculus OX=10090 GN=Svil PE=2 SV=2; Supervillin (Fragment) OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Archvillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Isoform 2 of Supervillin OS=Mus musculus OX=10090 GN=Svil; HP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1 1 3 3 0.5669 0 1 1 1 489.25879 1465.76181 1465.75967 1.46 0.00071 0/0 0 0 8851906 HCD 30 MS2 47.33837 1076.3 110 55.4586 15553 15553 15543 QEplus033719.raw F4 1407.8 748.3 1182.4 922 868.4 1328.8 260 4.11 1 FALSE 1.14E-05 0.0001596 0.818 -250 68085 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGANINEIR [R].qGANINEIR.[Q] N-Term(TMT6plex) 1 P60335 Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1 P60335 Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1 0 2 2 0.5515 0 1 1 1 622.3515 1243.69573 1243.69561 0.09 0.00006 0/0 0 0 22124436 HCD 30 MS2 14.34644 1024.7 110 55.4659 15555 15555 15554 QEplus033719.raw F4 993.8 903.5 1188.1 852.1 1124.8 1085.8 309 3.3 1 FALSE 1.14E-05 1.33E-05 1.024 -250 68090 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGDGTITTK [K].dGDGTITTk.[E] N-Term(TMT6plex); K9(TMT6plex) 2 P0DP27 Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1 P0DP27; Q3UKW2 Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=1 SV=1 0 2 2 0.5954 0 1 1 1 683.3877 1365.76811 1365.76258 4.05 0.00277 0/0 0 0 6723402 HCD 30 MS2 16.0051 588.5 110 55.4684 15556 15556 15554 QEplus033719.raw F4 575.9 525.4 603.3 466.1 764.3 595.7 437 2.62 1 FALSE 1.14E-05 8.78E-06 1.058 -250 68100 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YEEVARK [K].yEEVARk.[L] N-Term(TMT6plex); K7(TMT6plex) 38 E9Q456; G5E8R2; G5E8R1; P58774; Q8C7C3; A2AIM4; Q58E70; P58774-2; E9Q5J9; A0A0R4J1P2; E9Q450; Q6IRU2 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 E9Q456; Q9D1R6; E9Q455; G5E8R2; E9Q453; Q91VH3; G5E8R1; Q8BSH3; A0A571BEU1; D3Z6I8; E9Q452; P58774; F8WID5; A2RRI1; Q8C7C3; A2AIM4; Q3TJ53; Q58E70; D3Z2H9; Q3SX28; P58774-2; E9Q454; Q61344; E9Q5J9; A0A0R4J1P2; E9Q448; P21107; E9Q450; Q8K0Z5; G5E8R0; D3YVR0; Q564G1; B7ZNL3; Q8BP43; Q6IRU2; E9Q7Q3; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin 3, related sequence 7 OS=Mus musculus OX=10090 GN=Tpm3-rs7 PE=3 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=3; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 3, gamma OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 1 3 3 0.485 0 1 1 1 451.60306 1352.79462 1352.79382 0.59 0.00027 0/0 0 0 44493160 HCD 30 MS2 19.21138 1222.9 45.454 55.4706 15557 15557 15554 QEplus033719.raw F4 1635.7 847.2 1084.6 935 1742.2 1092.6 371 2.33 12 TRUE 0.001395 0.01981 0.283 -250 68118 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAAHPILR [R].vAAHPILR.[K] N-Term(TMT6plex) 3 Q6P8X1 Sorting nexin-6 OS=Mus musculus OX=10090 GN=Snx6 PE=1 SV=2 Q8R0Z4; A0A1W2P701; Q6P8X1 Snx6 protein OS=Mus musculus OX=10090 GN=Snx6 PE=2 SV=1; Sorting nexin-6 OS=Mus musculus OX=10090 GN=Snx6 PE=1 SV=1; Sorting nexin-6 OS=Mus musculus OX=10090 GN=Snx6 PE=1 SV=2 0 3 3 0.5852 0 1 1 1 369.24002 1105.70551 1105.70433 1.07 0.00039 0/0 0 0 17231194 HCD 30 MS2 32.81282 510.6 69.856 55.4754 15559 15559 15554 QEplus033719.raw F4 610.9 340.6 499.3 365 612.6 635.4 107 3.52 1 FALSE 0.000108 0.003092 0.555 -250 68128 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQDNVIK [K].sQDNVIk.[V] N-Term(TMT6plex); K7(TMT6plex) 3 Q9ERK4 Exportin-2 OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1 E9QAX7; Q9ERK4; E9Q1T9 Exportin-2 OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1; Exportin-2 OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1; Chromosome segregation 1-like protein OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1 0 2 2 0.2852 0 1 1 1 631.3797 1261.75212 1261.75162 0.4 0.00025 0/0 0 0 12200814 HCD 30 MS2 17.13822 1036.2 110 55.4779 15560 15560 15554 QEplus033719.raw F4 1131.7 854.5 966.9 772.7 1487.2 1004.1 669 2.77 1 FALSE 0.0001707 0.003864 0.531 -250 68134 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEQSYQK [R].vEQSYQk.[V] N-Term(TMT6plex); K7(TMT6plex) 17 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 F6XCT0; Q9QXZ0-3; B1ARU4; F6SHS0; E9QA63; E9QNP1; Q3UPG9; Q5DTZ2; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8 Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; MKIAA1251 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 2 2 0.5314 0 1 1 1 670.38477 1339.76225 1339.76219 0.05 0.00003 0/0 0 0 10027198 HCD 30 MS2 0 644.7 110 55.4804 15561 15561 15554 QEplus033719.raw F4 659.6 440.7 763.1 790.7 412.2 802.1 341 3.18 3 FALSE 0.0003408 0.006581 0.466 -250 68151 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSVAFK [K].rSVAFk.[K] N-Term(TMT6plex); K6(TMT6plex) 3 Q3U4Y0 H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f0 PE=2 SV=1 Q3U4Y0; Q8C1Y3; P10922 H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f0 PE=2 SV=1; H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f0 PE=2 SV=1; Histone H1.0 OS=Mus musculus OX=10090 GN=H1-0 PE=2 SV=4 1 3 3 0.1934 0 1 1 1 389.25381 1165.74689 1165.74575 0.98 0.00038 0/0 0 0 243766128 HCD 30 MS2 19.16082 584.1 4.092 55.4852 15563 15563 15554 QEplus033719.raw F4 484.2 536.6 703.5 585.9 610.3 584.2 106 2.74 1 FALSE 0.002173 0.04134 0.17 -250 68161 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLEEPEESK [K].rLEEPEESk.[V] N-Term(TMT6plex); K9(TMT6plex) 3 Q2YDW1 Eukaryotic translation initiation factor 3 30 kDa subunit (Fragment) OS=Mus musculus OX=10090 GN=Eif3j PE=2 SV=1 Q2YDW1; Q66JS6; Q3UGC7 Eukaryotic translation initiation factor 3 30 kDa subunit (Fragment) OS=Mus musculus OX=10090 GN=Eif3j PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit J-B OS=Mus musculus OX=10090 GN=Eif3j2 PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit J-A OS=Mus musculus OX=10090 GN=Eif3j1 PE=2 SV=1 1 3 3 0.6804 0 1 1 1 525.63171 1574.88059 1574.87901 1 0.00053 0/0 0 0 51701208 HCD 30 MS2 30.12359 990.9 42.357 55.4874 15564 15564 15554 QEplus033719.raw F4 1402.1 653.1 1044.8 855.2 785.6 1204.5 427 4.13 1 FALSE 1.14E-05 1.47E-08 1.585 -250 68190 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VCVDTHMR [R].vcVDTHMR.[S] N-Term(TMT6plex); C2(Carbamidomethyl) 4 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q61555; Q571J3 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Fibrillin-2 OS=Mus musculus OX=10090 GN=Fbn2 PE=1 SV=2; MKIAA4226 protein (Fragment) OS=Mus musculus OX=10090 GN=Fbn2 PE=2 SV=1 0 3 3 0.6189 0 1 1 1 416.21262 1246.62329 1246.62338 -0.07 -0.00003 0/0 0 0 29298966 HCD 30 MS2 53.38311 526.2 27.075 55.5015 15569 15569 15565 QEplus033719.raw F4 438.4 409.4 604.9 536.9 521.8 645.6 108 3.7 1 FALSE 1.14E-05 0.0003068 0.764 -250 68198 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMAQDLK [K].rMAQDLk.[D] N-Term(TMT6plex); K7(TMT6plex) 6 Q3UDG5 Nsp1_C domain-containing protein OS=Mus musculus OX=10090 GN=Nup62 PE=2 SV=1 Q3UDG5; Q63850; Q3THR9; Q3UGJ7; Q3TFE2; Q3U2X1 Nsp1_C domain-containing protein OS=Mus musculus OX=10090 GN=Nup62 PE=2 SV=1; Nuclear pore glycoprotein p62 OS=Mus musculus OX=10090 GN=Nup62 PE=1 SV=2; Nsp1_C domain-containing protein OS=Mus musculus OX=10090 GN=Nup62 PE=2 SV=1; Nsp1_C domain-containing protein OS=Mus musculus OX=10090 GN=Nup62 PE=2 SV=1; Nsp1_C domain-containing protein OS=Mus musculus OX=10090 GN=Nup62 PE=2 SV=1; Nsp1_C domain-containing protein OS=Mus musculus OX=10090 GN=Nup62 PE=2 SV=1 1 3 3 0.1202 0 1 1 1 440.60016 1319.78592 1319.78696 -0.79 -0.00035 0/0 0 0 17482254 HCD 30 MS2 21.13668 719.4 44.284 55.5038 15570 15570 15565 QEplus033719.raw F4 842.6 574.9 669.9 521.5 974 733.7 493 2.58 1 FALSE 0.00198 0.03453 0.196 -250 68206 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CILQDGR [R].cILQDGR.[VI] N-Term(TMT6plex); C1(Carbamidomethyl) 4 P27048 Small nuclear ribonucleoprotein-associated protein B OS=Mus musculus OX=10090 GN=Snrpb PE=1 SV=1 O70499; A0A0G2JGN4; P27048; P63163 Small nuclear ribonucleoprotein-associated protein OS=Mus musculus OX=10090 GN=Snrpn PE=3 SV=1; Small nuclear ribonucleoprotein-associated protein B OS=Mus musculus OX=10090 GN=Snrpb PE=4 SV=1; Small nuclear ribonucleoprotein-associated protein B OS=Mus musculus OX=10090 GN=Snrpb PE=1 SV=1; Small nuclear ribonucleoprotein-associated protein N OS=Mus musculus OX=10090 GN=Snrpn PE=1 SV=1 0 2 2 0.4397 0 1 1 1 545.79773 1090.58818 1090.58764 0.49 0.00027 0/0 0 0 14798622 HCD 30 MS2 29.88383 1330.3 110 55.5063 15571 15571 15565 QEplus033719.raw F4 1483.2 1139.6 1394.2 1049.7 1485.6 1429.4 276 2.57 1 FALSE 0.0003113 0.006126 0.476 -250 68212 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YASENVNK [R].yASENVNk.[L] N-Term(TMT6plex); K8(TMT6plex) 10 Q0PD67; Q9D1G1 Rab1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1;Ras-related protein Rab-1B OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1 Q5SW87; Q0PD67; Q3UB66; A0A494BBL7; Q9D1G1; A0A494B945; Q5SW88; Q6ZPF0; Q3V3C2; A0A494BA38 "RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; Rab1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab1a PE=2 SV=1; Ras-related protein Rab-1B OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1; Ras-related protein Rab-1B OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1; Ras-related protein Rab-1B (Fragment) OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1; RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; MKIAA3012 protein (Fragment) OS=Mus musculus OX=10090 GN=Rab1a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab1b PE=2 SV=1; Ras-related protein Rab-1B OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1" 0 3 3 0.6169 0 1 1 1 461.59396 1382.76734 1382.768 -0.48 -0.00022 0/0 0 0 12915186 HCD 30 MS2 29.14214 697 83.014 55.5085 15572 15572 15565 QEplus033719.raw F4 714.5 568.4 762.1 579.9 753.9 803.4 358 2.61 2 FALSE 0.001591 0.0247 0.246 -250 68219 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVAEDDEDDDVDTK [K].rVAEDDEDDDVDTk.[K] N-Term(TMT6plex); K14(TMT6plex) 6 Q8C2T3 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1 Q8C2T3; P26350; Q3U8X6; Q3U6E4; Q8CAQ5; Q3UA54 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Prothymosin alpha OS=Mus musculus OX=10090 GN=Ptma PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1 1 2 2 0.7775 0 1 1 1 1040.50854 2080.00981 2080.00824 0.75 0.00079 0/0 0 0 11164121 HCD 30 MS2 0 264.3 110 55.5111 15573 15573 15565 QEplus033719.raw F4 272.7 315.3 259.7 103.3 445.6 188.9 170 4.63 1 FALSE 1.14E-05 5.44E-15 2.807 -250 68224 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVPNDATQTK [K].tVPNDATQTk.[E] N-Term(TMT6plex); K10(TMT6plex) 5 E9QB01; A0A0A6YY47 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2;Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 E9QB01; P13595-2; A0A0A6YY91; A0A0A6YY47; P13595 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2; Isoform 2 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 (Fragment) OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=3 0 2 2 0.6064 0 1 1 1 766.9389 1532.87053 1532.86844 1.36 0.00104 0/0 0 0 7627253 HCD 30 MS2 38.50836 509.8 110 55.5136 15574 15574 15565 QEplus033719.raw F4 538.9 383.7 564.9 438.9 524.9 607.5 480 2.82 2 FALSE 1.14E-05 2.33E-05 0.978 -250 68234 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GASQAGMTGYGMPR [RK].gASQAGmTGYGMPR.[Q] N-Term(TMT6plex); M7(Oxidation) 3 Q9WVA4; Q9R1Q8 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4;Transgelin-3 OS=Mus musculus OX=10090 GN=Tagln3 PE=1 SV=1 Q9WVA4; Q9D6K2; Q9R1Q8 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4; Transgelin OS=Mus musculus OX=10090 GN=Tagln3 PE=2 SV=1; Transgelin-3 OS=Mus musculus OX=10090 GN=Tagln3 PE=1 SV=1 0 2 2 0.3284 0 1 1 1 814.88947 1628.77165 1628.77223 -0.35 -0.00029 0/0 0 0 2272997 HCD 30 MS2 0 106 110 55.5161 15575 15575 15565 QEplus033719.raw F4 112.7 101.2 108.4 86.4 134.2 93.4 66 2.71 2 FALSE 1.14E-05 1.79E-07 1.379 -250 68250 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MKGDYYR [K].mkGDYYR.[Y] N-Term(TMT6plex); K2(TMT6plex) 6 P68510; A8IP69; P63101 14-3-3 protein eta OS=Mus musculus OX=10090 GN=Ywhah PE=1 SV=2;14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1;14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 P68510; O70456; A0A2I3BQ03; A8IP69; Q9JJ20; P63101 14-3-3 protein eta OS=Mus musculus OX=10090 GN=Ywhah PE=1 SV=2; 14-3-3 protein sigma OS=Mus musculus OX=10090 GN=Sfn PE=1 SV=2; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1; 14-3-3 protein sigma OS=Mus musculus OX=10090 GN=Sfn PE=2 SV=1; 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 1 3 3 0.4979 0 1 1 1 464.25684 1390.75595 1390.75533 0.45 0.00021 0/0 0 0 72966968 HCD 30 MS2 22.36167 952.4 14.983 55.5279 15579 15579 15576 QEplus033719.raw F4 666.9 1191.3 1272.3 713 824.1 1046.9 347 2.39 3 FALSE 0.008043 0.1343 -0.066 -250 68257 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETIEQEK [K].eTIEQEk.[EQR] N-Term(TMT6plex); K7(TMT6plex) 6 P20065 Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x PE=1 SV=1 Q9D2R9; A2AEH9; P20065-2; P20065; A6H6H4; P21752 Thymosin beta OS=Mus musculus OX=10090 GN=Tmsb15a PE=2 SV=1; Thymosin beta 15a OS=Mus musculus OX=10090 GN=Tmsb15a PE=3 SV=1; Isoform Short of Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x; Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x PE=1 SV=1; Thymosin beta OS=Mus musculus OX=10090 GN=Tmsb10 PE=1 SV=1; SWISS-PROT:P21752 (Bos taurus) Thymosin beta-9 0 3 3 0.3023 0 1 1 1 445.59085 1334.758 1334.75677 0.92 0.00041 0/0 0 0 51280836 HCD 30 MS2 64.05576 863.8 25.111 55.5302 15580 15580 15576 QEplus033719.raw F4 945.6 723.5 951.4 739 914.4 908.8 464 2.58 1 TRUE 0.003464 0.06707 0.095 -250 68265 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADLSGMSGSR [K].aDLSGMSGSR.[D] N-Term(TMT6plex) 4 Q9D154 Leukocyte elastase inhibitor A OS=Mus musculus OX=10090 GN=Serpinb1a PE=1 SV=1 Q8BK60; Q8VHP7; Q5SV42; Q9D154 SERPIN domain-containing protein OS=Mus musculus OX=10090 GN=Serpinb1a PE=2 SV=1; Leukocyte elastase inhibitor B OS=Mus musculus OX=10090 GN=Serpinb1b PE=1 SV=1; Leukocyte elastase inhibitor C OS=Mus musculus OX=10090 GN=Serpinb1c PE=1 SV=1; Leukocyte elastase inhibitor A OS=Mus musculus OX=10090 GN=Serpinb1a PE=1 SV=1 0 2 2 0.6881 0 1 1 1 605.30884 1209.6104 1209.6095 0.74 0.00045 0/0 0 0 44181588 HCD 30 MS2 6.895124 850.2 52.28 55.5325 15581 15581 15576 QEplus033719.raw F4 993.9 385.8 641.4 1321.2 801.8 957.2 118 2.95 1 FALSE 1.14E-05 4.61E-07 1.301 -250 68281 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQPMTPEAVR [R].nQPMTPEAVR.[D] N-Term(TMT6plex) 3 P51660 Peroxisomal multifunctional enzyme type 2 OS=Mus musculus OX=10090 GN=Hsd17b4 PE=1 SV=3 P51660; Q3TT11; Q3UHW2 Peroxisomal multifunctional enzyme type 2 OS=Mus musculus OX=10090 GN=Hsd17b4 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsd17b4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsd17b4 PE=2 SV=1 0 2 2 0.4401 0 1 1 1 686.36774 1371.7282 1371.7252 2.18 0.0015 0/0 0 0 4774123.5 HCD 30 MS2 39.08317 426.4 110 55.54 15584 15584 15576 QEplus033719.raw F4 391.5 384.6 483.7 396 458.2 444.4 215 3.34 1 FALSE 1.14E-05 0.0001124 0.847 -250 68289 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MMMQSGRK [R].mMMQSGRk.[G] N-Term(TMT6plex); K8(TMT6plex) 3 Q8BVI9; P51881 ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a4 PE=2 SV=1;ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3 Q8BVI9; P48962; P51881 ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a4 PE=2 SV=1; ADP/ATP translocase 1 OS=Mus musculus OX=10090 GN=Slc25a4 PE=1 SV=4; ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3 1 2 2 0.1921 0 1 1 1 713.89465 1426.78203 1426.7733 6.12 0.00436 0/0 0 0 3656354 HCD 30 MS2 0 309 110 55.5425 15585 15585 15576 QEplus033719.raw F4 289.7 237.3 337.9 276.4 359.6 353.2 281 1.77 2 FALSE 0.0006035 0.00895 0.422 -250 68316 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STEVMK [K].sTEVMk.[A] N-Term(TMT6plex); K6(TMT6plex) 3 Q9CQ10 Charged multivesicular body protein 3 OS=Mus musculus OX=10090 GN=Chmp3 PE=1 SV=3 A0A0N4SVS3; Q9CQ10; A0A0N4SUX9 Charged multivesicular body protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Chmp3 PE=1 SV=3; Charged multivesicular body protein 3 OS=Mus musculus OX=10090 GN=Chmp3 PE=1 SV=3; Charged multivesicular body protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Chmp3 PE=1 SV=1 0 2 2 0.3072 0 1 1 1 576.84003 1152.67278 1152.66987 2.53 0.00146 0/0 0 0 10433771 HCD 30 MS2 31.18397 1026.9 110 55.5546 15589 15589 15587 QEplus033719.raw F4 1131.3 783.3 1056.4 926.3 1108.2 1155.9 259 1.66 1 FALSE 0.004832 0.08468 0.049 -250 68333 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCCSCCPVGCAK [K].sccSccPVGcAk.[C] N-Term(TMT6plex); C2(Carbamidomethyl); C3(Carbamidomethyl); C5(Carbamidomethyl); C6(Carbamidomethyl); C10(Carbamidomethyl); K12(TMT6plex) 3 P02798 Metallothionein-2 OS=Mus musculus OX=10090 GN=Mt2 PE=1 SV=2 P02798; Q6VEU6; P67983 Metallothionein-2 OS=Mus musculus OX=10090 GN=Mt2 PE=1 SV=2; Metallothionein OS=Mus musculus OX=10090 PE=2 SV=1; SWISS-PROT:P67983 (Bos taurus) Metallothionein-1A 0 3 3 0.9072 0 1 1 1 635.28436 1903.83854 1903.83572 1.48 0.00094 0/0 0 0 28449018 HCD 30 MS2 36.47098 1138.9 110 55.5616 15592 15592 15587 QEplus033719.raw F4 996 1138.4 1443.2 810.8 1161.4 1283.6 23 4.42 1 TRUE 1.14E-05 4.26E-09 1.688 -250 68337 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLAGNPK [R].tLAGNPk.[A] N-Term(TMT6plex); K7(TMT6plex) 1 Q91VW3 SH3 domain-binding glutamic acid-rich-like protein 3 OS=Mus musculus OX=10090 GN=Sh3bgrl3 PE=1 SV=1 Q91VW3 SH3 domain-binding glutamic acid-rich-like protein 3 OS=Mus musculus OX=10090 GN=Sh3bgrl3 PE=1 SV=1 0 2 2 0.2469 0 1 1 1 579.86707 1158.72685 1158.72468 1.88 0.00109 0/0 0 0 27706736 HCD 30 MS2 6.149528 1286.3 67.7 55.5639 15593 15593 15587 QEplus033719.raw F4 1482.7 1221.1 1282.1 889.9 1905.8 936.3 203 2.39 1 FALSE 0.003109 0.06055 0.113 -250 68347 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLAGEVAK [R].hLAGEVAk.[E] N-Term(TMT6plex); K8(TMT6plex) 7 Q3TWL6 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1 Q3TI61; Q3TWL6; Q3TW71; Q3U9Y8; Q3TIP0; Q8VDM4; Q3TXV1 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1 0 2 2 0.1546 0 1 1 1 641.90198 1282.79668 1282.78834 6.5 0.00417 0/0 0 0 11589968 HCD 30 MS2 60.79482 1461.8 110 55.5664 15594 15594 15587 QEplus033719.raw F4 1535 1193.7 1476.3 1242 1819.6 1504.2 164 3.17 1 FALSE 0.0002719 0.005407 0.492 -250 68357 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTCQDITECQTSPAR [R].tTcQDITEcQTSPAR.[I] N-Term(TMT6plex); C3(Carbamidomethyl); C9(Carbamidomethyl) 3 P37889 Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 P37889-2; Q99K58; P37889 Isoform 2 of Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2; Fibulin 2 OS=Mus musculus OX=10090 GN=Fbln2 PE=2 SV=1; Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 0 2 2 0.8866 0 1 1 1 998.96814 1996.929 1996.92656 1.23 0.00122 0/0 0 0 6976686.5 HCD 30 MS2 0 287.6 110 55.569 15595 15595 15587 QEplus033719.raw F4 306.9 228.2 344 329.4 235.8 281.3 71 5.38 1 FALSE 1.14E-05 1.45E-10 1.966 -250 68361 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQVCVVTGASR [K].gQVcVVTGASR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 1 Q99L04 Dehydrogenase/reductase SDR family member 1 OS=Mus musculus OX=10090 GN=Dhrs1 PE=1 SV=1 Q99L04 Dehydrogenase/reductase SDR family member 1 OS=Mus musculus OX=10090 GN=Dhrs1 PE=1 SV=1 0 2 2 0.6394 0 1 1 1 681.87189 1362.7365 1362.7361 0.29 0.0002 0/0 0 0 9679127 HCD 30 MS2 23.44691 591.4 110 55.5715 15596 15596 15587 QEplus033719.raw F4 611.2 487.1 629.4 512.3 684.2 624.2 348 3.91 1 FALSE 1.14E-05 5.07E-08 1.483 -250 68379 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREEQAEPDGTEVADK [K].qREEQAEPDGTEVADk.[AT] N-Term(TMT6plex); K16(TMT6plex) 11 Q5SX40; P13541; Q5SX39; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; Q3UUB1; B2RWX0; Q8BLW0; I6L963; B1AR69; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 3 3 0.8249 0 1 1 1 754.0542 2260.14804 2260.14574 1.02 0.00077 0/0 0 0 19682588 HCD 30 MS2 0 493.6 106.324 55.5813 15599 15599 15598 QEplus033719.raw F4 574.7 58.4 311.6 1097.6 62.8 856.8 259 7.31 4 FALSE 1.14E-05 6.31E-16 4.395 -250 68386 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GANPVEIR [K].gANPVEIR.[R] N-Term(TMT6plex) 3 P63038 "60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" D3Z2F2; D3Z7J9; P63038 "60 kDa heat shock protein, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1; 60 kDa heat shock protein, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1; 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" 0 2 2 0.2688 0 1 1 1 542.82007 1084.63286 1084.63122 1.51 0.00082 0/0 0 0 72986952 HCD 30 MS2 11.15293 848.5 24.176 55.5836 15600 15600 15598 QEplus033719.raw F4 891.6 739.9 997.8 770.6 797.7 893.7 161 2.53 1 FALSE 0.0005076 0.008047 0.438 -250 68391 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALLQSSASR [K].aLLQSSASR.[K] N-Term(TMT6plex) 4 Q3TGU7 Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=1 Q3TGU7; Q05BN2; P50580-2; Q3UMW2 Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=1; Pa2g4 protein (Fragment) OS=Mus musculus OX=10090 GN=Pa2g4 PE=2 SV=1; Isoform 2 of Proliferation-associated protein 2G4 OS=Mus musculus OX=10090 GN=Pa2g4; Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=2 SV=1 0 2 2 0.5 0 1 1 1 581.34387 1161.68047 1161.6789 1.35 0.00078 0/0 0 0 50437156 HCD 30 MS2 17.26708 875.9 28.127 55.5858 15601 15601 15598 QEplus033719.raw F4 881.9 714.7 950.8 822.8 863.9 1021.4 404 3.66 1 FALSE 1.14E-05 1.29E-06 1.217 -250 68401 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTDQEELVK [R].hTDQEELVk.[I] N-Term(TMT6plex); K9(TMT6plex) 6 E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" A0A087WS16; D3YWD1; J3QQ16; Q9Z0I9; O88493; E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen, type VI, alpha 3 (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen alpha3(VI) (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Type VI collagen alpha 3 subunit OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" 0 3 3 0.6042 0 1 1 1 519.6283 1556.87033 1556.86844 1.22 0.00063 0/0 0 0 34293676 HCD 30 MS2 32.21363 770.5 37.146 55.5881 15602 15602 15598 QEplus033719.raw F4 817.9 673 771 541.5 989.4 830.2 372 4.27 1 FALSE 1.14E-05 2.16E-06 1.174 -250 68409 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DWPDAR [R].dWPDAR.[G] N-Term(TMT6plex) 7 P07310; Q04447 Creatine kinase M-type OS=Mus musculus OX=10090 GN=Ckm PE=1 SV=1;Creatine kinase B-type OS=Mus musculus OX=10090 GN=Ckb PE=1 SV=1 P07310; Q545N7; Q6P8J7; A0A0J9YKD4; A2ARP5; Q04447; Q9D6U7 "Creatine kinase M-type OS=Mus musculus OX=10090 GN=Ckm PE=1 SV=1; Creatine kinase OS=Mus musculus OX=10090 GN=Ckmt1 PE=1 SV=1; Creatine kinase S-type, mitochondrial OS=Mus musculus OX=10090 GN=Ckmt2 PE=1 SV=1; Creatine kinase OS=Mus musculus OX=10090 GN=Ckm PE=1 SV=1; Creatine kinase (Fragment) OS=Mus musculus OX=10090 GN=Ckmt1 PE=1 SV=1; Creatine kinase B-type OS=Mus musculus OX=10090 GN=Ckb PE=1 SV=1; Creatine kinase OS=Mus musculus OX=10090 GN=Ckm PE=2 SV=1" 0 2 2 1 0 1 1 1 494.75677 988.50627 988.50496 1.33 0.00066 0/0 0 0 26577560 HCD 30 MS2 42.35462 1034.9 43.919 55.5904 15603 15603 15598 QEplus033719.raw F4 1212.9 526.6 1012.7 1390.6 627.4 1439 43 2.03 2 FALSE 0.00439 0.07939 0.063 -250 68417 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAPAMTSK [K].gAPAMTSk.[K] N-Term(TMT6plex); K8(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 2 2 0.574 0 1 1 1 610.8584 1220.70952 1220.70731 1.81 0.0011 0/0 0 0 13233944 HCD 30 MS2 27.26777 1481.6 110 55.5951 15605 15605 15598 QEplus033719.raw F4 1823.2 538.3 1392.4 2217.9 684.7 2233 418 2.77 1 FALSE 1.14E-05 0.0001494 0.824 -250 68427 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFHTVSGSK [K].kFHTVSGSk.[C] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 6 Q544Z3 S1 protein D2 OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1 Q9D6G1; Q8CIR3; Q80XR6; Q544Z3; Q20BD0; Q3TMZ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1; CArG-binding factor A (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; S1 protein D2 OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1 1 2 2 0.531 0 1 1 1 839.51923 1678.03118 1678.0255 3.38 0.00284 0/0 0 0 2135144 HCD 30 MS2 34.48772 221.6 110 55.5977 15606 15606 15598 QEplus033719.raw F4 214.9 129.8 151 336.8 322 175.1 326 2.9 1 FALSE 1.14E-05 5.84E-06 1.092 -250 68437 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMGADLCR [R].nMGADLcR.[Q] N-Term(TMT6plex); C7(Carbamidomethyl) 3 Q3UE11 Procollagen-lysine 5-dioxygenase OS=Mus musculus OX=10090 PE=2 SV=1 Q3UE11; Q3TZN4; Q9R0E2 "Procollagen-lysine 5-dioxygenase OS=Mus musculus OX=10090 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Plod1 PE=2 SV=1; Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Mus musculus OX=10090 GN=Plod1 PE=1 SV=1" 0 2 2 0.4167 0 1 1 1 583.28717 1165.56706 1165.56553 1.32 0.00077 0/0 0 0 16320106 HCD 30 MS2 69.84734 1236.1 47.504 55.5999 15607 15607 15598 QEplus033719.raw F4 1200.4 1161.9 1368.2 880.2 1536.2 1270 69 2.04 1 FALSE 0.001559 0.02353 0.254 -250 68444 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EASSEELK [R].eASSEELk.[A] N-Term(TMT6plex); K8(TMT6plex) 2 Q5U458 DnaJ homolog subfamily C member 11 OS=Mus musculus OX=10090 GN=Dnajc11 PE=1 SV=2 Q5U458; E9Q8B3 DnaJ homolog subfamily C member 11 OS=Mus musculus OX=10090 GN=Dnajc11 PE=1 SV=2; DnaJ homolog subfamily C member 11 OS=Mus musculus OX=10090 GN=Dnajc11 PE=1 SV=1 0 2 2 0.3506 0 1 1 1 675.88007 1350.75286 1350.75168 0.87 0.00059 0/0 0 0 9316292 HCD 30 MS2 45.91653 624.7 110 55.6025 15608 15608 15598 QEplus033719.raw F4 605.2 480.4 658.8 617 657.3 729.7 369 3.08 1 FALSE 1.14E-05 6.21E-05 0.897 -250 68456 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVEEEEEDGEMRE [KR].gVEEEEEDGEMRE.[-] N-Term(TMT6plex) 3 P62307 Small nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Snrpf PE=1 SV=1 Q3UX80; P62307; Q6NZQ3 Sm protein F OS=Mus musculus OX=10090 GN=Snrpf PE=2 SV=1; Small nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Snrpf PE=1 SV=1; Sm protein F (Fragment) OS=Mus musculus OX=10090 GN=Snrpf PE=2 SV=1 1 2 2 0.8445 0 1 1 1 883.88379 1766.7603 1766.7588 0.85 0.00075 0/0 0 0 9546086 HCD 30 MS2 0 327.7 110 55.6123 15611 15611 15609 QEplus033719.raw F4 341 345.4 362.9 230.9 368.4 317.7 6 4.18 1 FALSE 1.14E-05 1.27E-09 1.787 -250 68463 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YGMGTSVER [R].yGMGTSVER.[A] N-Term(TMT6plex) 1 Q3UFJ3 Pyruvate dehydrogenase E1 component subunit alpha OS=Mus musculus OX=10090 GN=Pdha1 PE=1 SV=1 Q3UFJ3 Pyruvate dehydrogenase E1 component subunit alpha OS=Mus musculus OX=10090 GN=Pdha1 PE=1 SV=1 0 2 2 0.5746 0 1 1 1 614.81384 1228.62041 1228.61934 0.87 0.00054 0/0 0 0 42020312 HCD 30 MS2 6.363481 842.7 49.81 55.6168 15613 15613 15609 QEplus033719.raw F4 808.5 566.1 916.1 1116 590.5 1058.8 115 3.15 1 FALSE 1.14E-05 8.25E-06 1.063 -250 68481 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MKGDYYR [K].mkGDYYR.[Y] N-Term(TMT6plex); K2(TMT6plex) 6 P68510; A8IP69; P63101 14-3-3 protein eta OS=Mus musculus OX=10090 GN=Ywhah PE=1 SV=2;14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1;14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 P68510; O70456; A0A2I3BQ03; A8IP69; Q9JJ20; P63101 14-3-3 protein eta OS=Mus musculus OX=10090 GN=Ywhah PE=1 SV=2; 14-3-3 protein sigma OS=Mus musculus OX=10090 GN=Sfn PE=1 SV=2; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1; 14-3-3 protein sigma OS=Mus musculus OX=10090 GN=Sfn PE=2 SV=1; 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 1 2 2 0.6059 0 1 1 1 695.88147 1390.75566 1390.75533 0.24 0.00017 0/0 0 0 33213394 HCD 30 MS2 26.50386 942.1 66.419 55.6213 15615 15615 15609 QEplus033719.raw F4 642.5 1193 1253.9 675.4 891 996.7 352 2.36 3 FALSE 0.005189 0.08875 0.038 -250 68489 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEEVER [K].kLEEVER.[K] N-Term(TMT6plex); K1(TMT6plex) 3 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1; Q3UM46 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.1551 0 1 1 1 454.27869 1360.82151 1360.82004 1.08 0.00049 0/0 0 0 30637186 HCD 30 MS2 26.01174 913.3 43.879 55.6236 15616 15616 15609 QEplus033719.raw F4 1014.1 744.6 934.3 732.7 1002.3 1052.1 553 2.45 1 FALSE 0.001231 0.01656 0.314 -250 68510 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEGVFICR [R].hEGVFIcR.[G] N-Term(TMT6plex); C7(Carbamidomethyl) 2 Q3UJS2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fbl PE=2 SV=1 Q3UJS2; P35550 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fbl PE=2 SV=1; rRNA 2'-O-methyltransferase fibrillarin OS=Mus musculus OX=10090 GN=Fbl PE=1 SV=2 0 3 3 0.6607 0 1 1 1 416.22418 1246.65799 1246.65639 1.28 0.00053 0/0 0 0 19681058 HCD 30 MS2 55.21901 640.8 46.275 55.6304 15619 15619 15609 QEplus033719.raw F4 639.5 515.6 667.1 649.9 671.9 700.8 265 3.92 1 FALSE 1.14E-05 0.0002133 0.794 -250 68525 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VKPMSAPSR [R].vkPMSAPSR.[S] N-Term(TMT6plex); K2(TMT6plex) 10 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; A0A0G2JFT4; A0A0G2JG35; A0A140T8T5; P27546-3; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 3 3 0.589 0 1 1 1 477.6235 1430.85596 1430.85538 0.41 0.00019 0/0 0 0 60369436 HCD 30 MS2 18.01117 912 19.719 55.6422 15623 15623 15620 QEplus033719.raw F4 892.1 809.1 1041.6 676.2 1004.5 1048.4 354 3.09 2 FALSE 0.0002719 0.005457 0.491 -250 68535 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YTIENPR [K].yTIENPR.[H] N-Term(TMT6plex) 5 Q78PY7 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 Q78PY7; Q3UZI3; Q3TW51; Q3TRW3; Q3TJ56 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 0 2 2 1 0 1 1 1 561.31201 1121.61675 1121.61524 1.34 0.00075 0/0 0 0 29456666 HCD 30 MS2 8.711922 865.6 64.023 55.6467 15625 15625 15620 QEplus033719.raw F4 842.2 728.2 930.6 743.3 1082.3 866.9 255 2.6 1 FALSE 0.001293 0.01765 0.303 -250 68551 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVATPAK [K].aVATPAk.[K] N-Term(TMT6plex); K7(TMT6plex) 7 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30; Q9CT46 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 2 2 0.1639 0 1 1 1 558.36365 1115.72002 1115.71887 1.03 0.00058 0/0 0 0 26943918 HCD 30 MS2 48.35164 977.1 35.051 55.6537 15628 15628 15620 QEplus033719.raw F4 1058.9 584.3 785.1 1572.1 956 906.1 200 2.44 1 FALSE 0.001744 0.02962 0.218 -250 68561 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELNTLR [K].eLNTLR.[V] N-Term(TMT6plex) 2 P47758 Signal recognition particle receptor subunit beta OS=Mus musculus OX=10090 GN=Srprb PE=1 SV=1 P47758; Q542X6 Signal recognition particle receptor subunit beta OS=Mus musculus OX=10090 GN=Srprb PE=1 SV=1; Signal recognition particle receptor subunit beta OS=Mus musculus OX=10090 GN=Srprb PE=2 SV=1 0 2 2 0.1314 0 1 1 1 487.79504 974.58281 974.58321 -0.41 -0.0002 0/0 0 0 23054586 HCD 30 MS2 51.75234 723.7 35.071 55.656 15629 15629 15620 QEplus033719.raw F4 831.3 585.9 781.1 612.8 749.3 781.6 264 1.75 1 FALSE 0.00574 0.09624 0.017 -250 68565 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVAMIDETR [R].rVAMIDETR.[N] N-Term(TMT6plex) 13 Q8CAQ8 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; A6H604; Q3U7N2; Q6P8Y5; Q8CAQ8; Q8CAQ8-2; Q3TVZ5; Q2YDW0; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5; A0A0U1RQ14 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 1 3 3 0.6368 0 1 1 1 440.58224 1319.73218 1319.73029 1.44 0.00063 0/0 0 0 20950618 HCD 30 MS2 49.04871 776.3 39.424 55.6582 15630 15630 15620 QEplus033719.raw F4 1614.8 458.5 625.4 504.5 754.2 700.3 373 3.91 1 FALSE 1.14E-05 0.0003618 0.75 -250 68571 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAPEGVIDR [K].gAPEGVIDR.[C] N-Term(TMT6plex) 5 O55143-2; O55143; Q8R429 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 O55143-2; O55143; Q5DTI2; O54994; Q8R429 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; Sarcoplasmic reticulum Ca2+-ATPase (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 0 2 2 0.5729 0 1 1 1 571.82184 1142.6364 1142.6367 -0.27 -0.00015 0/0 0 0 33062726 HCD 30 MS2 5.074251 914.9 52.919 55.6655 15632 15632 15631 QEplus033719.raw F4 978.4 399.1 764.1 1524.2 575.1 1248.6 136 2.88 3 FALSE 1.14E-05 0.000217 0.793 -250 68578 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAVPPGADK [R].sAVPPGADk.[K] N-Term(TMT6plex); K9(TMT6plex) 3 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" P63325; A0A338P7K4; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 0 3 3 0.4535 0 1 1 1 433.92776 1299.76874 1299.76727 1.13 0.00049 0/0 0 0 18414680 HCD 30 MS2 26.4712 802.2 69.722 55.6678 15633 15633 15631 QEplus033719.raw F4 1251.5 531.9 789.2 565.2 738 937.1 343 2.69 2 FALSE 0.0002119 0.004285 0.519 -250 68588 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MMMQSGRK [R].mMMQSGRk.[G] N-Term(TMT6plex); K8(TMT6plex) 3 Q8BVI9; P51881 ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a4 PE=2 SV=1;ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3 Q8BVI9; P48962; P51881 ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a4 PE=2 SV=1; ADP/ATP translocase 1 OS=Mus musculus OX=10090 GN=Slc25a4 PE=1 SV=4; ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3 1 3 3 0.3913 0 1 1 1 476.26379 1426.77683 1426.7733 2.47 0.00118 0/0 0 0 59583228 HCD 30 MS2 54.71786 1232.3 22.508 55.6701 15634 15634 15631 QEplus033719.raw F4 1170 936.1 1331.6 946.9 1552.4 1456.6 295 1.84 2 FALSE 0.004972 0.08669 0.043 -250 68597 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YRNPVSQCMR [R].yRNPVSQcMR.[G] N-Term(TMT6plex); C8(Carbamidomethyl) 13 Q8BUM1 TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1 Q8R0B4; Q8BUM1; C9DT14; A0A087WR97; D2KPZ5; Q6VYI5; A0A087WSE4; A0A087WP57; A0A087WRZ5; Q544R5; Q8BLD4; Q6VYI4; Q05C33 TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1; TAR DNA-binding protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1 1 3 3 0.7512 0 1 1 1 513.92914 1539.77286 1539.77217 0.45 0.00023 0/0 0 0 28812472 HCD 30 MS2 7.70118 685.9 73.692 55.6746 15636 15636 15631 QEplus033719.raw F4 692.1 646.7 812 516.9 787.7 659.9 171 4.26 1 FALSE 1.14E-05 1.89E-08 1.565 -250 68613 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVEEEEEDGEMRE [KR].gVEEEEEDGEMRE.[-] N-Term(TMT6plex) 3 P62307 Small nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Snrpf PE=1 SV=1 Q3UX80; P62307; Q6NZQ3 Sm protein F OS=Mus musculus OX=10090 GN=Snrpf PE=2 SV=1; Small nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Snrpf PE=1 SV=1; Sm protein F (Fragment) OS=Mus musculus OX=10090 GN=Snrpf PE=2 SV=1 1 3 3 0.8681 0 1 1 1 589.59149 1766.75992 1766.7588 0.63 0.00037 0/0 0 0 15322156 HCD 30 MS2 12.74737 481.7 110 55.6793 15638 15638 15631 QEplus033719.raw F4 539.5 377.1 505.2 449.4 493.8 525.1 5 5.08 1 FALSE 1.14E-05 6.86E-07 1.268 -250 68616 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STPLTAAPGGR [R].sTPLTAAPGGR.[G] N-Term(TMT6plex) 6 Q3TUP8 t-SNARE coiled-coil homology domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Vti1b PE=2 SV=1 Q3TUP8; Q91XH6; F6UHS3; F6T4B9; Q9Z2P7; O88384 t-SNARE coiled-coil homology domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Vti1b PE=2 SV=1; Vesicle transport through interaction with t-SNAREs 1B homolog OS=Mus musculus OX=10090 GN=Vti1b PE=1 SV=1; Vesicle transport through interaction with t-SNAREs homolog 1B (Fragment) OS=Mus musculus OX=10090 GN=Vti1b PE=1 SV=1; Vesicle transport through interaction with t-SNAREs homolog 1B (Fragment) OS=Mus musculus OX=10090 GN=Vti1b PE=1 SV=1; GES30 OS=Mus musculus OX=10090 GN=Vti1b PE=2 SV=1; Vesicle transport through interaction with t-SNAREs homolog 1B OS=Mus musculus OX=10090 GN=Vti1b PE=1 SV=1 0 2 2 0.6509 0 1 1 1 628.86273 1256.71819 1256.71602 1.73 0.00109 0/0 0 0 8332507.5 HCD 30 MS2 13.26156 636.2 110 55.6819 15639 15639 15631 QEplus033719.raw F4 648.3 515.7 688.1 558.5 704.3 702.3 303 3.18 1 FALSE 7.59E-05 0.00278 0.566 -250 68623 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGPPGPAGQDGRPGPAGPPGAR [K].tGPPGPAGQDGRPGPAGPPGAR.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 3 3 0.7239 0 1 1 1 732.72186 2196.15104 2196.14713 1.78 0.0013 0/0 0 0 5761137 HCD 30 MS2 0 284.2 110 55.6844 15640 15640 15631 QEplus033719.raw F4 246.7 317.8 352 119.5 366.8 302.6 368 5.18 1 FALSE 1.14E-05 1.35E-15 2.922 -250 68631 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEEVER [K].kLEEVER.[K] N-Term(TMT6plex); K1(TMT6plex) 3 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1; Q3UM46 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 2 2 0.1818 0 1 1 1 680.91473 1360.82219 1360.82004 1.58 0.00108 0/0 0 0 7014027 HCD 30 MS2 30.3134 650.8 110 55.6869 15641 15641 15631 QEplus033719.raw F4 684.5 533.2 691.8 581.6 694.6 719.1 525 1.98 1 FALSE 0.001514 0.02272 0.26 -250 68636 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMMAACDPR [K].nMMAAcDPR.[H] N-Term(TMT6plex); C6(Carbamidomethyl) 14 Q7TMM9; P99024; P68372; Q9CWF2; Q3UMM1 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1;Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=1 SV=1 Q7TMM9; Q9D6F9; Q9CVR0; Q9ERD7; Q9CUN8; Q80ZV2; Q3U9U3; Q9CRT0; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2; Q3UMM1 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Tubulin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-3 chain OS=Mus musculus OX=10090 GN=Tubb3 PE=1 SV=1; Tubulin_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb6 PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=2 SV=1; Tubulin_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1; Tubulin beta chain OS=Mus musculus OX=10090 GN=Tubb6 PE=1 SV=1 0 2 2 0.8869 0 1 1 1 647.80078 1294.59429 1294.59036 3.03 0.00196 0/0 0 0 7555530 HCD 30 MS2 42.40138 498 110 55.6942 15643 15643 15642 QEplus033719.raw F4 490.6 409.5 521.3 422.5 589.7 554.3 26 2.74 5 FALSE 0.001506 0.022 0.265 -250 68639 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YLATCADDR [K].yLATcADDR.[T] N-Term(TMT6plex); C5(Carbamidomethyl) 4 Q9R099 Transducin beta-like protein 2 OS=Mus musculus OX=10090 GN=Tbl2 PE=1 SV=2 Q9R099; D3YZH8; Q9CY49; F8WI46 Transducin beta-like protein 2 OS=Mus musculus OX=10090 GN=Tbl2 PE=1 SV=2; Transducin beta-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Tbl2 PE=1 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Tbl2 PE=2 SV=1; Transducin beta-like protein 2 OS=Mus musculus OX=10090 GN=Tbl2 PE=1 SV=1 0 2 2 0.5177 0 1 1 1 657.32172 1313.63616 1313.63572 0.33 0.00022 0/0 0 0 3753051.5 HCD 30 MS2 73.18428 764.6 110 55.6967 15644 15644 15642 QEplus033719.raw F4 750.8 603.7 813.4 780.4 809.6 829.8 82 3.11 1 FALSE 1.14E-05 3.74E-05 0.938 -250 68650 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YASENVNK [R].yASENVNk.[L] N-Term(TMT6plex); K8(TMT6plex) 10 Q0PD67; Q9D1G1 Rab1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1;Ras-related protein Rab-1B OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1 Q5SW87; Q0PD67; Q3UB66; A0A494BBL7; Q9D1G1; A0A494B945; Q5SW88; Q6ZPF0; Q3V3C2; A0A494BA38 "RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; Rab1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab1a PE=2 SV=1; Ras-related protein Rab-1B OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1; Ras-related protein Rab-1B OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1; Ras-related protein Rab-1B (Fragment) OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1; RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; MKIAA3012 protein (Fragment) OS=Mus musculus OX=10090 GN=Rab1a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab1b PE=2 SV=1; Ras-related protein Rab-1B OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1" 0 2 2 0.638 0 1 1 1 691.88812 1382.76897 1382.768 0.7 0.00048 0/0 0 0 63137420 HCD 30 MS2 5.600563 927.6 31.607 55.7012 15646 15646 15642 QEplus033719.raw F4 857.7 754.9 1005.2 876.9 1016.5 1054.3 369 3.37 2 FALSE 1.14E-05 0.0003942 0.742 -250 68657 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DKDPVNK [K].dkDPVNk.[S] N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex) 1 P62852 40S ribosomal protein S25 OS=Mus musculus OX=10090 GN=Rps25 PE=1 SV=1 P62852 40S ribosomal protein S25 OS=Mus musculus OX=10090 GN=Rps25 PE=1 SV=1 1 3 3 0.2078 0 1 1 1 501.64331 1502.91538 1502.91455 0.55 0.00027 0/0 0 0 27248562 HCD 30 MS2 65.52589 1528 47.175 55.7058 15648 15648 15642 QEplus033719.raw F4 2513.4 1021.2 1595.8 1270 1139.9 1627.5 357 1.54 1 FALSE 0.002249 0.04361 0.162 -250 68664 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAILAAQR [K].qAILAAQR.[R] N-Term(TMT6plex) 1 Q9JMG1 Endothelial differentiation-related factor 1 OS=Mus musculus OX=10090 GN=Edf1 PE=1 SV=1 Q9JMG1 Endothelial differentiation-related factor 1 OS=Mus musculus OX=10090 GN=Edf1 PE=1 SV=1 0 2 2 0.5678 0 1 1 1 550.34326 1099.67925 1099.67851 0.67 0.00037 0/0 0 0 22447820 HCD 30 MS2 36.45208 1220.3 72.829 55.708 15649 15649 15642 QEplus033719.raw F4 1253.2 1092.2 1416.1 975.1 1365 1220.3 184 2.73 1 FALSE 1.14E-05 0.0002145 0.794 -250 68693 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMNENMK [K].sMNENMk.[N] N-Term(TMT6plex); K7(TMT6plex) 4 D3YV19 Plasminogen receptor (KT) OS=Mus musculus OX=10090 GN=Plgrkt PE=1 SV=1 D3YV19; D3YXU2; D3YY76; Q9D3P8 Plasminogen receptor (KT) OS=Mus musculus OX=10090 GN=Plgrkt PE=1 SV=1; Plasminogen receptor (KT) (Fragment) OS=Mus musculus OX=10090 GN=Plgrkt PE=1 SV=1; Plasminogen receptor (KT) (Fragment) OS=Mus musculus OX=10090 GN=Plgrkt PE=1 SV=1; Plasminogen receptor (KT) OS=Mus musculus OX=10090 GN=Plgrkt PE=1 SV=1 0 2 2 0.4491 0 1 1 1 656.34015 1311.67302 1311.68011 -5.41 -0.00355 0/0 0 0 3556939 HCD 30 MS2 71.61486 940.5 110 55.7248 15655 15655 15653 QEplus033719.raw F4 992 703.7 1001.3 915.2 974.7 1055.8 156 2.16 1 FALSE 0.0008363 0.01155 0.38 -250 68698 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QASEGPLK [K].qASEGPLk.[G] N-Term(TMT6plex); K8(TMT6plex) 10 V9GX06; A0A0A0MQF6 Predicted gene 11214 (Fragment) OS=Mus musculus OX=10090 GN=Gm11214 PE=1 SV=1;Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 A0A1D5RLD8; V9GX06; A0A0A0MQF6; V9GXK0; W8QM43; P16858; S4R1W1; Q3TUZ9; Q4VBD1; S4R257 Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm10358 PE=1 SV=1; Predicted gene 11214 (Fragment) OS=Mus musculus OX=10090 GN=Gm11214 PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Predicted gene 12117 OS=Mus musculus OX=10090 GN=Gm12117 PE=3 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=2 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=2; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm3839 PE=1 SV=1; Gp_dh_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gm10481 PE=2 SV=1; Gapdh protein OS=Mus musculus OX=10090 GN=Gapdh PE=2 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 0 2 2 0.5946 0 1 1 1 644.38806 1287.76885 1287.76727 1.22 0.00079 0/0 0 0 59976316 HCD 30 MS2 8.560755 1185.6 36.162 55.7271 15656 15656 15653 QEplus033719.raw F4 1386.2 900.4 1167.2 1245.2 1096.8 1317.9 409 2.96 2 FALSE 1.14E-05 0.0004767 0.726 -250 68705 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAVPPGADK [R].sAVPPGADk.[K] N-Term(TMT6plex); K9(TMT6plex) 3 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" P63325; A0A338P7K4; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 0 2 2 0.4534 0 1 1 1 650.38812 1299.76897 1299.76727 1.31 0.00085 0/0 0 0 53898116 HCD 30 MS2 17.77114 788.6 43.618 55.7294 15657 15657 15653 QEplus033719.raw F4 790 732.3 820.2 611.7 947.8 829.6 343 3.11 2 FALSE 1.14E-05 0.0002453 0.782 -250 68724 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TATEKPGVEEAAR [R].tATEkPGVEEAAR.[Q] N-Term(TMT6plex); K5(TMT6plex) 4 Q6PG98 Ferredoxin--NADP(+) reductase (Fragment) OS=Mus musculus OX=10090 GN=Fdxr PE=2 SV=1 Q6PG98; Q6IQY0; Q61578; Q3UZ58 "Ferredoxin--NADP(+) reductase (Fragment) OS=Mus musculus OX=10090 GN=Fdxr PE=2 SV=1; NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Mus musculus OX=10090 GN=Fdxr PE=2 SV=1; NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Mus musculus OX=10090 GN=Fdxr PE=1 SV=1; NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Mus musculus OX=10090 GN=Fdxr PE=2 SV=1" 0 3 3 0.4964 0 1 1 1 606.34485 1817.01999 1817.0169 1.7 0.00103 0/0 0 0 8091625.5 HCD 30 MS2 13.24951 556.3 110 55.7364 15660 15660 15653 QEplus033719.raw F4 540.8 433.3 666.2 537.4 556.3 603.6 457 2.74 1 FALSE 1.14E-05 5.12E-07 1.293 -250 68733 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MSALQESR [R].mSALQESR.[R] N-Term(TMT6plex) 23 I6L9D6 Dystrobrevin OS=Mus musculus OX=10090 GN=Dtna PE=2 SV=1 I6L9D6; Q3UHP1; A0A1Y7VJN9; G3UZJ3; G3UXK0; O70585; G3UYK9; G3UYM7; Q9D2N4-4; G3UY34; Q3UHJ2; Q9D2N4-3; Q9D2N4-7; G3UYD1; Q3V0M6; A0A1Y7VL34; Q9D2N4; O70585-2; Q8C8Z9; G3UZ87; Q9D2N4-2; Q8CFR5; Q8K0N0 Dystrobrevin OS=Mus musculus OX=10090 GN=Dtna PE=2 SV=1; Dystrobrevin OS=Mus musculus OX=10090 GN=Dtna PE=2 SV=1; Dystrobrevin OS=Mus musculus OX=10090 GN=Dtna PE=1 SV=1; Dystrobrevin beta OS=Mus musculus OX=10090 GN=Dtnb PE=1 SV=1; Dystrobrevin OS=Mus musculus OX=10090 GN=Dtnb PE=1 SV=1; Dystrobrevin beta OS=Mus musculus OX=10090 GN=Dtnb PE=1 SV=3; Dystrobrevin beta (Fragment) OS=Mus musculus OX=10090 GN=Dtnb PE=1 SV=1; Dystrobrevin OS=Mus musculus OX=10090 GN=Dtnb PE=1 SV=1; Isoform 4 of Dystrobrevin alpha OS=Mus musculus OX=10090 GN=Dtna; Dystrobrevin OS=Mus musculus OX=10090 GN=Dtnb PE=1 SV=1; Dystrobrevin OS=Mus musculus OX=10090 GN=Dtna PE=2 SV=1; Isoform 3 of Dystrobrevin alpha OS=Mus musculus OX=10090 GN=Dtna; Isoform 7 of Dystrobrevin alpha OS=Mus musculus OX=10090 GN=Dtna; Dystrobrevin beta (Fragment) OS=Mus musculus OX=10090 GN=Dtnb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dtna PE=2 SV=1; Dystrobrevin OS=Mus musculus OX=10090 GN=Dtna PE=1 SV=1; Dystrobrevin alpha OS=Mus musculus OX=10090 GN=Dtna PE=1 SV=2; Isoform 2 of Dystrobrevin beta OS=Mus musculus OX=10090 GN=Dtnb; Dystrobrevin OS=Mus musculus OX=10090 GN=Dtnb PE=1 SV=1; Dystrobrevin OS=Mus musculus OX=10090 GN=Dtnb PE=1 SV=1; Isoform 2 of Dystrobrevin alpha OS=Mus musculus OX=10090 GN=Dtna; Dystrobrevin OS=Mus musculus OX=10090 GN=Dtna PE=1 SV=1; Dystrobrevin OS=Mus musculus OX=10090 GN=Dtnb PE=1 SV=1 0 2 2 0.3932 0 1 1 1 575.80988 1150.61247 1150.60877 3.22 0.00185 0/0 0 0 5086381 HCD 30 MS2 39.01312 1008.5 110 55.7389 15661 15661 15653 QEplus033719.raw F4 1124 788.1 1118.5 881.2 1116.7 1022.4 220 2.34 1 FALSE 0.0015 0.02176 0.267 -250 68742 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VKPMSAPSR [R].vkPMSAPSR.[S] N-Term(TMT6plex); K2(TMT6plex) 10 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; A0A0G2JFT4; A0A0G2JG35; A0A140T8T5; P27546-3; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 2 2 0.3804 0 1 1 1 715.93152 1430.85576 1430.85538 0.27 0.00019 0/0 0 0 3582369.25 HCD 30 MS2 18.90034 282 110 55.7414 15662 15662 15653 QEplus033719.raw F4 267 234.7 312.1 228.9 323.1 326.1 362 1.84 2 FALSE 0.009548 0.1806 -0.118 -250 68781 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDRPVDTSETK [K].vDRPVDTSETk.[E] N-Term(TMT6plex); K11(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.603 0 1 1 1 568.9895 1704.95395 1704.95323 0.42 0.00024 0/0 0 0 39094092 HCD 30 MS2 22.36599 1176.6 53.436 55.758 15668 15668 15664 QEplus033719.raw F4 1271.3 505.1 1199.3 1747.4 520.7 1815.8 402 3.3 2 FALSE 1.14E-05 2.73E-06 1.155 -250 68789 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYLEEQK [K].rYLEEQk.[T] N-Term(TMT6plex); K7(TMT6plex) 3 Q569Z6 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1 Q569Z6; Q8BZN7; Q8BV76 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Thrap3 PE=2 SV=1 1 3 3 0.3879 0 1 1 1 475.28156 1423.83011 1423.83094 -0.58 -0.00027 0/0 0 0 17546180 HCD 30 MS2 48.34718 1085.4 61.586 55.7603 15669 15669 15664 QEplus033719.raw F4 1119 1012.1 1192.7 792.4 1324.1 1071.9 348 2.81 1 FALSE 0.0002119 0.004409 0.516 -250 68796 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTYPCSCEK [K].tTYPcScEk.[I] N-Term(TMT6plex); C5(Carbamidomethyl); C7(Carbamidomethyl); K9(TMT6plex) 2 Q3UII2 Tetraspanin OS=Mus musculus OX=10090 GN=Cd82 PE=1 SV=1 Q3UII2; A2AIJ1 Tetraspanin OS=Mus musculus OX=10090 GN=Cd82 PE=1 SV=1; Tetraspanin (Fragment) OS=Mus musculus OX=10090 GN=Cd82 PE=1 SV=1 0 2 2 0.0517 0 1 1 1 802.40442 1603.80156 1603.78604 9.68 0.00776 0/0 0 0 8799781 HCD 30 MS2 18.14215 605.1 110 55.7653 15671 15671 15664 QEplus033719.raw F4 578.8 557.8 815.3 496.8 567 614.8 168 2.32 1 FALSE 1.14E-05 6.66E-05 0.891 -250 68803 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEGANIQPNR [K].mEGANIQPNR.[V] N-Term(TMT6plex) 1 Q6PB66 "Leucine-rich PPR motif-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Lrpprc PE=1 SV=2" Q6PB66 "Leucine-rich PPR motif-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Lrpprc PE=1 SV=2" 0 2 2 0.6498 0 1 1 1 679.85687 1358.70647 1358.7048 1.23 0.00083 0/0 0 0 8171971 HCD 30 MS2 44.96801 577.4 110 55.7678 15672 15672 15664 QEplus033719.raw F4 642.8 425.6 644.3 588.1 500.2 663.6 171 2.97 1 FALSE 1.14E-05 0.0004282 0.735 -250 68810 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QATENAKEEVKR [K].qATENAkEEVkR.[I] N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex) 2 Q9D8N0 Elongation factor 1-gamma OS=Mus musculus OX=10090 GN=Eef1g PE=1 SV=3 Q8R1N8; Q9D8N0 Eef1g protein OS=Mus musculus OX=10090 GN=Eef1g PE=2 SV=1; Elongation factor 1-gamma OS=Mus musculus OX=10090 GN=Eef1g PE=1 SV=3 2 4 4 0.5 0 1 1 1 523.31036 2090.21963 2090.21728 1.12 0.00059 0/0 0 0 36653184 HCD 30 MS2 25.64248 699 24.555 55.77 15673 15673 15664 QEplus033719.raw F4 715.1 696.7 809.8 609.9 731 631.6 381 1.5 1 FALSE 1.14E-05 0.0009521 0.666 -250 68834 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPPGPPGK [RK].gPPGPPGk.[ND] N-Term(TMT6plex); K8(TMT6plex) 5 B1AWB9; O88207-2; P11087 "Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1;Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1;Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4" P11087-2; B1AWB9; O88207-2; Q61022; P11087 "Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1; Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1; Alpha-1 type 1 collagen (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4" 0 3 3 0.4078 0 1 1 1 388.90958 1164.71418 1164.71411 0.05 0.00002 0/0 0 0 23436428 HCD 30 MS2 28.27335 566.1 41.959 55.7818 15677 15677 15675 QEplus033719.raw F4 513.2 588.1 682.1 326.8 686.7 600 217 2.82 3 FALSE 0.0001603 0.003828 0.532 -250 68843 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRELEQLGR [R].qRELEQLGR.[Q] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.37 0 1 1 1 453.26419 1357.77802 1357.77493 2.28 0.00103 0/0 0 0 52327188 HCD 30 MS2 15.64748 530.4 19.647 55.7841 15678 15678 15675 QEplus033719.raw F4 611.4 412.8 560 481.9 543.2 573.2 360 4.27 2 FALSE 1.14E-05 5.38E-05 0.908 -250 68849 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TFCPAHK [K].tFcPAHk.[S] N-Term(TMT6plex); C3(Carbamidomethyl); K7(TMT6plex) 4 Q3UHT6 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1 Q3UHT6; P19096; Q3TB22; A0A0U1RNJ1 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2; Fatty acid synthase (Fragment) OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=1 0 3 3 0.4412 0 1 1 1 440.25015 1318.7359 1318.7342 1.29 0.00057 0/0 0 0 51803444 HCD 30 MS2 48.14583 775.8 23.217 55.7863 15679 15679 15675 QEplus033719.raw F4 1246.2 489.4 644 647.6 963.5 664 412 2.72 1 FALSE 0.0001603 0.003779 0.533 -250 68854 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAVDNCQDSWR [K].sAVDNcQDSWR.[R] N-Term(TMT6plex); C6(Carbamidomethyl) 3 Q9DCD0 "6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=1 SV=3" Q9DCD0; Q3UAG2; Q91V28 "6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=1 SV=3; 6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=2 SV=1; 6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=2 SV=1" 0 2 2 0.8765 0 1 1 1 783.86273 1566.71819 1566.71682 0.87 0.00068 0/0 0 0 17132390 HCD 30 MS2 4.182486 595.8 110 55.7889 15680 15680 15675 QEplus033719.raw F4 560.3 635.3 688.7 461.6 616.6 612.5 34 4.05 1 FALSE 1.14E-05 1.87E-08 1.566 -250 68865 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNQFSVTR [R].tNQFSVTR.[H] N-Term(TMT6plex) 4 F6UIS1 Endoplasmic reticulum-Golgi intermediate compartment protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Ergic3 PE=1 SV=8 F6UIS1; Q9CQE7-2; F6RK81; Q9CQE7 Endoplasmic reticulum-Golgi intermediate compartment protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Ergic3 PE=1 SV=8; Isoform 2 of Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Mus musculus OX=10090 GN=Ergic3; Endoplasmic reticulum-Golgi intermediate compartment protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Ergic3 PE=1 SV=1; Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Mus musculus OX=10090 GN=Ergic3 PE=1 SV=1 0 2 2 0.5625 0 1 1 1 591.33118 1181.65508 1181.6476 6.33 0.00374 0/0 0 0 8109783.5 HCD 30 MS2 46.32381 1030.3 110 55.7936 15682 15682 15675 QEplus033719.raw F4 1143.3 748.7 964.4 802.1 1621.6 901.9 259 1.92 1 FALSE 0.003851 0.07247 0.081 -250 68870 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASQGPVYK [R].aSQGPVYk.[G] N-Term(TMT6plex); K8(TMT6plex) 3 Q5M9P7 Calcium regulated heat stable protein 1 OS=Mus musculus OX=10090 GN=Carhsp1 PE=1 SV=1 Q5M9P7; Q3U434; Q3UD53 Calcium regulated heat stable protein 1 OS=Mus musculus OX=10090 GN=Carhsp1 PE=1 SV=1; CSD domain-containing protein OS=Mus musculus OX=10090 GN=Carhsp1 PE=2 SV=1; CSD domain-containing protein OS=Mus musculus OX=10090 GN=Carhsp1 PE=2 SV=1 0 2 2 0.4422 0 1 1 1 654.38928 1307.77129 1307.77236 -0.82 -0.00053 0/0 0 0 8089044 HCD 30 MS2 0 707.3 110 55.7961 15683 15683 15675 QEplus033719.raw F4 707.4 677.3 748.1 590.3 800.6 720.1 419 3.46 1 FALSE 1.14E-05 0.0001148 0.846 -250 68888 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YRNPVSQCMR [R].yRNPVSQcMR.[G] N-Term(TMT6plex); C8(Carbamidomethyl) 13 Q8BUM1 TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1 Q8R0B4; Q8BUM1; C9DT14; A0A087WR97; D2KPZ5; Q6VYI5; A0A087WSE4; A0A087WP57; A0A087WRZ5; Q544R5; Q8BLD4; Q6VYI4; Q05C33 TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1; TAR DNA-binding protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1 1 2 2 0.7748 0 1 1 1 770.38953 1539.77178 1539.77217 -0.25 -0.0002 0/0 0 0 2886482.25 HCD 30 MS2 0 95 110 55.8012 15685 15685 15675 QEplus033719.raw F4 93.2 90.6 110.4 65.7 109 101.1 170 3.02 1 FALSE 0.0004091 0.007275 0.453 -250 68895 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGIADGHK [R].vGIADGHk.[M] N-Term(TMT6plex); K8(TMT6plex) 3 Q8C605 ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkp PE=1 SV=1 Q9WUA3-2; Q8C605; Q9WUA3 "Isoform 2 of ATP-dependent 6-phosphofructokinase, platelet type OS=Mus musculus OX=10090 GN=Pfkp; ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkp PE=1 SV=1; ATP-dependent 6-phosphofructokinase, platelet type OS=Mus musculus OX=10090 GN=Pfkp PE=1 SV=1" 0 3 3 0.5661 0 1 1 1 418.92419 1254.75803 1254.75704 0.79 0.00033 0/0 0 0 35818052 HCD 30 MS2 17.6849 647.5 35.586 55.8084 15687 15687 15686 QEplus033719.raw F4 768.6 553 643.2 550.9 781.1 588.2 265 3.48 1 FALSE 1.14E-05 1.18E-05 1.034 -250 68907 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QASEGPLK [K].qASEGPLk.[G] N-Term(TMT6plex); K8(TMT6plex) 10 V9GX06; A0A0A0MQF6 Predicted gene 11214 (Fragment) OS=Mus musculus OX=10090 GN=Gm11214 PE=1 SV=1;Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 A0A1D5RLD8; V9GX06; A0A0A0MQF6; V9GXK0; W8QM43; P16858; S4R1W1; Q3TUZ9; Q4VBD1; S4R257 Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm10358 PE=1 SV=1; Predicted gene 11214 (Fragment) OS=Mus musculus OX=10090 GN=Gm11214 PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Predicted gene 12117 OS=Mus musculus OX=10090 GN=Gm12117 PE=3 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=2 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=2; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm3839 PE=1 SV=1; Gp_dh_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gm10481 PE=2 SV=1; Gapdh protein OS=Mus musculus OX=10090 GN=Gapdh PE=2 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 0 3 3 0.5791 0 1 1 1 429.92786 1287.76902 1287.76727 1.35 0.00058 0/0 0 0 91147920 HCD 30 MS2 11.83977 454.9 12.264 55.813 15689 15689 15686 QEplus033719.raw F4 542.7 345.4 459.4 476.5 403.8 501.7 404 3.54 2 FALSE 1.14E-05 0.0003412 0.755 -250 68915 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDPHEATCYDDGK [K].cDPHEATcYDDGk.[T] N-Term(TMT6plex); C1(Carbamidomethyl); C8(Carbamidomethyl); K13(TMT6plex) 14 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q99KD0; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.9376 0 1 1 1 675.97308 2025.9047 2025.90465 0.02 0.00002 0/0 0 0 30423054 HCD 30 MS2 2.403839 747.5 110 55.8177 15691 15691 15686 QEplus033719.raw F4 760.6 716 858.7 966.2 517.9 665.4 34 4.65 3 FALSE 1.14E-05 4.93E-12 2.245 -250 68921 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAYSSFGSR [K].dAYSSFGSR.[GDS] N-Term(TMT6plex) 6 B9EKE9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1 B9EKE9; B7ZWF1; Q62095; Q3TQX5; P16381; Q3U484 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; ATP-dependent RNA helicase DDX3Y OS=Mus musculus OX=10090 GN=Ddx3y PE=1 SV=2; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=1; Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus OX=10090 GN=D1Pas1 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3y PE=2 SV=1 0 2 2 0.7357 0 1 1 1 609.80219 1218.59709 1218.59523 1.53 0.00093 0/0 0 0 28573296 HCD 30 MS2 26.85463 1329.3 110 55.8202 15692 15692 15686 QEplus033719.raw F4 1343.4 1277.6 1404.7 1077.6 1613 1259.8 66 3.33 1 FALSE 1.14E-05 5.38E-06 1.099 -250 68925 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRELEQLGR [R].qRELEQLGR.[Q] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.441 0 1 1 1 679.39197 1357.77666 1357.77493 1.28 0.00087 0/0 0 0 12594268 HCD 30 MS2 35.92314 548.9 110 55.8228 15693 15693 15686 QEplus033719.raw F4 584.9 443.1 596.7 532.1 523.8 613 396 2.29 2 FALSE 0.001125 0.01482 0.335 -250 68931 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTYPCSCEK [K].tTYPcScEk.[I] N-Term(TMT6plex); C5(Carbamidomethyl); C7(Carbamidomethyl); K9(TMT6plex) 2 Q3UII2 Tetraspanin OS=Mus musculus OX=10090 GN=Cd82 PE=1 SV=1 Q3UII2; A2AIJ1 Tetraspanin OS=Mus musculus OX=10090 GN=Cd82 PE=1 SV=1; Tetraspanin (Fragment) OS=Mus musculus OX=10090 GN=Cd82 PE=1 SV=1 0 2 2 0.7129 0 1 1 1 802.39655 1603.78581 1603.78604 -0.14 -0.00011 0/0 0 0 12062855 HCD 30 MS2 5.833054 753.8 110 55.8253 15694 15694 15686 QEplus033719.raw F4 734.1 717.4 1083.3 558.8 737.2 692 124 3.17 1 FALSE 1.14E-05 5.24E-05 0.911 -250 68937 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGSPGEAGSAGPAGPPGLR [K].rGSPGEAGSAGPAGPPGLR.[G] N-Term(TMT6plex) 3 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 1 3 3 0.7849 0 1 1 1 640.68103 1920.02854 1920.02489 1.9 0.00122 0/0 0 0 10071334 HCD 30 MS2 0 287.6 110 55.8278 15695 15695 15686 QEplus033719.raw F4 297.2 263.1 310.7 208.3 352.2 294.3 412 8.46 1 FALSE 1.14E-05 6.31E-16 4.407 -250 68943 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RCAYVYK [K].rcAYVYk.[A] N-Term(TMT6plex); C2(Carbamidomethyl); K7(TMT6plex) 3 O55142 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2 O55142; Q9DC85; Q8BQV7 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1 1 2 2 0.5489 0 1 1 1 709.40668 1417.80608 1417.80261 2.44 0.00173 0/0 0 0 3580457.25 HCD 30 MS2 0 398.7 110 55.8303 15696 15696 15686 QEplus033719.raw F4 370.1 322.5 455.7 348.8 430.1 465.1 439 2.35 1 FALSE 0.008943 0.1598 -0.098 -250 68951 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TFCPAHK [K].tFcPAHk.[S] N-Term(TMT6plex); C3(Carbamidomethyl); K7(TMT6plex) 4 Q3UHT6 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1 Q3UHT6; P19096; Q3TB22; A0A0U1RNJ1 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2; Fatty acid synthase (Fragment) OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=1 0 2 2 0.3954 0 1 1 1 659.86993 1318.73259 1318.7342 -1.22 -0.0008 0/0 0 0 7851729 HCD 30 MS2 0 578.3 110 55.8376 15698 15698 15697 QEplus033719.raw F4 618.1 498.6 600.9 436.3 759 556.8 358 3.06 1 FALSE 0.0003496 0.006737 0.463 -250 68957 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTGASGSFK [K].gTGASGSFk.[L] N-Term(TMT6plex); K9(TMT6plex) 9 P43274; Q1WWK3; P15864 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2;Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1;Histone H1.2 OS=Mus musculus OX=10090 GN=H1-2 PE=1 SV=2 P43274; Q1WWK3; I7HFT9; P43276; Q3UXH2; Q3U292; P15864; Q07133; P43277 "Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2; Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1; H1.6 linker histone, cluster member OS=Mus musculus OX=10090 GN=H1f6 PE=1 SV=1; Histone H1.5 OS=Mus musculus OX=10090 GN=H1-5 PE=1 SV=2; H15 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=H1f2 PE=2 SV=1; H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f3 PE=2 SV=1; Histone H1.2 OS=Mus musculus OX=10090 GN=H1-2 PE=1 SV=2; Histone H1t OS=Mus musculus OX=10090 GN=H1-6 PE=1 SV=4; Histone H1.3 OS=Mus musculus OX=10090 GN=H1-3 PE=1 SV=2" 0 2 2 0.44 0 1 1 1 635.36407 1269.72087 1269.72032 0.43 0.00028 0/0 0 0 3353154.5 HCD 30 MS2 0 648.6 110 55.8402 15699 15699 15697 QEplus033719.raw F4 628.2 611.1 677.1 480 841.7 653.6 314 2 3 FALSE 0.003372 0.06511 0.1 -250 68965 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RCAYVYK [K].rcAYVYk.[A] N-Term(TMT6plex); C2(Carbamidomethyl); K7(TMT6plex) 3 O55142 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2 O55142; Q9DC85; Q8BQV7 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1 1 3 3 0.5735 0 1 1 1 473.27222 1417.8021 1417.80261 -0.36 -0.00017 0/0 0 0 83627968 HCD 30 MS2 40.7565 1083.7 16.007 55.8424 15700 15700 15697 QEplus033719.raw F4 1399.7 856.1 1246.5 904.7 913.2 1182 405 3.47 1 FALSE 1.14E-05 0.0009599 0.666 -250 68983 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SKSDASTPPSPK [K].skSDASTPPSPk.[V] N-Term(TMT6plex); K2(TMT6plex); K12(TMT6plex) 2 Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 Q3TXE5; Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 1 3 3 0.7564 0 1 1 1 630.37012 1889.0958 1889.0947 0.58 0.00037 0/0 0 0 26499878 HCD 30 MS2 17.24308 1165.6 110 55.8494 15703 15703 15697 QEplus033719.raw F4 1127.7 1176.3 1230.8 1049.7 1243.8 1165 421 5.05 1 FALSE 1.14E-05 2.73E-12 2.294 -250 68995 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSLNCLSR [K].qSLNcLSR.[R] N-Term(TMT6plex); C5(Carbamidomethyl) 2 O89112 Glutathione S-transferase LANCL1 OS=Mus musculus OX=10090 GN=Lancl1 PE=1 SV=1 O89112; B2KGR2 Glutathione S-transferase LANCL1 OS=Mus musculus OX=10090 GN=Lancl1 PE=1 SV=1; Glutathione S-transferase LANCL1 (Fragment) OS=Mus musculus OX=10090 GN=Lancl1 PE=1 SV=1 0 2 2 0.2817 0 1 1 1 603.82806 1206.64885 1206.64622 2.18 0.00131 0/0 0 0 8710838 HCD 30 MS2 38.40379 920.6 110 55.857 15706 15706 15697 QEplus033719.raw F4 729.5 914 906.7 696.5 1296.6 980.6 229 2.13 1 FALSE 0.0002419 0.004985 0.502 -250 69003 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDPHEATCYDDGK [K].cDPHEATcYDDGk.[T] N-Term(TMT6plex); C1(Carbamidomethyl); C8(Carbamidomethyl); K13(TMT6plex) 14 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q99KD0; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.9186 0 1 1 1 1013.45776 2025.90825 2025.90465 1.78 0.0018 0/0 0 0 1536984.5 HCD 30 MS2 0 183.5 110 55.8595 15707 15707 15697 QEplus033719.raw F4 182.5 169.4 211.4 257.9 121.3 158.7 34 4.42 3 FALSE 1.14E-05 1.06E-11 2.182 -250 69007 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QATENAKEEVKR [K].qATENAkEEVkR.[I] N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex) 2 Q9D8N0 Elongation factor 1-gamma OS=Mus musculus OX=10090 GN=Eef1g PE=1 SV=3 Q8R1N8; Q9D8N0 Eef1g protein OS=Mus musculus OX=10090 GN=Eef1g PE=2 SV=1; Elongation factor 1-gamma OS=Mus musculus OX=10090 GN=Eef1g PE=1 SV=3 2 3 3 0.4413 0 1 1 1 697.41077 2090.21775 2090.21728 0.22 0.00016 0/0 0 0 14419926 HCD 30 MS2 0 505.5 110 55.8668 15709 15709 15708 QEplus033719.raw F4 467.1 553.8 610.6 506.1 435.5 460.1 388 2.47 1 FALSE 1.14E-05 4.74E-09 1.679 -250 69016 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MAAHPNVQK [R].mAAHPNVQk.[V] N-Term(TMT6plex); K9(TMT6plex) 2 E9Q6R7 Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 O08614; E9Q6R7 Cytoskeletal protein OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 0 3 3 0.5771 0 1 1 1 485.28357 1453.83615 1453.83497 0.81 0.00039 0/0 0 0 5676142.5 HCD 30 MS2 31.05529 724.5 110 55.8693 15710 15710 15708 QEplus033719.raw F4 835.6 499.8 758.8 599.9 667.4 985.6 324 4.02 1 FALSE 0.0003012 0.00607 0.477 -250 69041 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGPPGPAGQDGRPGPAGPPGAR [K].tGPPGPAGQDGRPGPAGPPGAR.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 4 4 0.757 0 1 1 1 549.79333 2196.15151 2196.14713 2 0.0011 0/0 0 0 17815868 HCD 30 MS2 39.96528 594.5 81.564 55.8761 15713 15713 15708 QEplus033719.raw F4 578.5 548.9 666.8 514.3 619.8 638.7 364 4.65 1 FALSE 1.14E-05 1.67E-10 1.955 -250 69046 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTYPCSCEK [K].tTYPcScEk.[I] N-Term(TMT6plex); C5(Carbamidomethyl); C7(Carbamidomethyl); K9(TMT6plex) 2 Q3UII2 Tetraspanin OS=Mus musculus OX=10090 GN=Cd82 PE=1 SV=1 Q3UII2; A2AIJ1 Tetraspanin OS=Mus musculus OX=10090 GN=Cd82 PE=1 SV=1; Tetraspanin (Fragment) OS=Mus musculus OX=10090 GN=Cd82 PE=1 SV=1 0 3 3 0.6545 0 1 1 1 535.26733 1603.78745 1603.78604 0.88 0.00047 0/0 0 0 20076092 HCD 30 MS2 54.41905 826.3 55.603 55.8784 15714 15714 15708 QEplus033719.raw F4 949.5 722.6 991 707.9 809.7 777.3 133 2.46 1 FALSE 0.004881 0.0855 0.047 -250 69052 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEKPNPLR [R].gEkPNPLR.[Q] N-Term(TMT6plex); K3(TMT6plex) 2 A0A1L1SVK0 Platelet-activating factor acetylhydrolase IB subunit alpha2 (Fragment) OS=Mus musculus OX=10090 GN=Pafah1b2 PE=1 SV=1 A0A1L1SVK0; Q61206 Platelet-activating factor acetylhydrolase IB subunit alpha2 (Fragment) OS=Mus musculus OX=10090 GN=Pafah1b2 PE=1 SV=1; Platelet-activating factor acetylhydrolase IB subunit alpha2 OS=Mus musculus OX=10090 GN=Pafah1b2 PE=1 SV=2 0 3 3 0.2146 0 1 1 1 456.95065 1368.83741 1368.83635 0.77 0.00035 0/0 0 0 16552119 HCD 30 MS2 33.79491 897 69.181 55.8806 15715 15715 15708 QEplus033719.raw F4 1036.5 758.9 949.3 687.3 949.6 1000.3 226 2.05 1 FALSE 0.005197 0.08893 0.037 -250 69057 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHYTIGK [R].gHYTIGk.[E] N-Term(TMT6plex); K7(TMT6plex) 12 P68369; Q52L87; A0A0A0MQA5 Tubulin alpha-1A chain OS=Mus musculus OX=10090 GN=Tuba1a PE=1 SV=1;Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=1 SV=1;Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1 A0A087WRB4; Q5FW91; Q3TIZ0; Q99KA2; A0A2R8VHF3; P68369; P05213; A0A087WQS4; Q52L87; A0A0A0MQA5; O89052; P68368 Tubulin alpha-4A chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba3a PE=1 SV=1; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=2 SV=1; Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba1b PE=2 SV=1; Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Gm49450 PE=3 SV=1; Tubulin alpha-1A chain OS=Mus musculus OX=10090 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Mus musculus OX=10090 GN=Tuba1b PE=1 SV=2; Tubulin alpha-4A chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=1 SV=1; Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1; Alpha-tubulin (Fragment) OS=Mus musculus OX=10090 GN=Tuba1b PE=2 SV=1; Tubulin alpha-4A chain OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1 0 2 2 0.6596 0 1 1 1 617.37268 1233.73808 1233.73558 2.03 0.00125 0/0 0 0 13819197 HCD 30 MS2 17.12415 1306.3 110 55.8831 15716 15716 15708 QEplus033719.raw F4 1499.1 1199.8 1109.2 1342.9 1982 704.7 523 2.82 3 FALSE 0.0002419 0.004778 0.507 -250 69062 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEAKPGTPAK [K].aEAkPGTPAk.[A] N-Term(TMT6plex); K4(TMT6plex); K10(TMT6plex) 5 A0A286YDA2 Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1 A0A286YDA2; A0A286YDT3; A0A286YDV7; E9Q5C9; E9Q5C9-2 Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 (Fragment) OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Isoform 2 of Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 0 3 3 0.42 0 1 1 1 553.0141 1657.02774 1657.02517 1.56 0.00086 0/0 0 0 8264055 HCD 30 MS2 34.06454 1249.8 110 55.8856 15717 15717 15708 QEplus033719.raw F4 1496 1000.6 1345.3 1116.5 1325.4 1214.7 252 2.5 1 FALSE 0.0001504 0.003382 0.546 -250 69086 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLQHPNIVR [K].gLQHPNIVR.[F] N-Term(TMT6plex) 30 Q6SLK2 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk1 PE=2 SV=1 V9GWU7; P83741-2; E9QM73; Q3UH66-6; E9Q6Q2; Q80UE6; Q3TU87; E0CZE3; Q3UH66; Q6SLK2; E9PZ38; P83741; Q3UH66-2; E9QMI9; E0CYT1; P83741-3; Q80XP9-2; Q56VR4; P83741-5; P83741-6; Q3UH66-5; E9QMI8; Q3UH66-4; E9QJQ9; P83741-4; Q3UH66-7; E9Q470; V9GXP7; Q80XP9; Q3UH66-3 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk3 PE=1 SV=1; Isoform 2 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk2 PE=1 SV=1; Isoform 6 of Serine/threonine-protein kinase WNK2 OS=Mus musculus OX=10090 GN=Wnk2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk2 PE=1 SV=1; Serine/threonine-protein kinase WNK4 OS=Mus musculus OX=10090 GN=Wnk4 PE=1 SV=1; Protein kinase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wnk1 PE=2 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk2 PE=1 SV=1; Serine/threonine-protein kinase WNK2 OS=Mus musculus OX=10090 GN=Wnk2 PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk1 PE=2 SV=1; Serine/threonine-protein kinase WNK4 OS=Mus musculus OX=10090 GN=Wnk4 PE=1 SV=1; Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1 PE=1 SV=2; Isoform 2 of Serine/threonine-protein kinase WNK2 OS=Mus musculus OX=10090 GN=Wnk2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk2 PE=1 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk2 PE=1 SV=1; Isoform 3 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1; Isoform 2 of Serine/threonine-protein kinase WNK3 OS=Mus musculus OX=10090 GN=Wnk3; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk4 PE=2 SV=1; Isoform 5 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1; Isoform 6 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1; Isoform 5 of Serine/threonine-protein kinase WNK2 OS=Mus musculus OX=10090 GN=Wnk2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk2 PE=1 SV=1; Isoform 4 of Serine/threonine-protein kinase WNK2 OS=Mus musculus OX=10090 GN=Wnk2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk2 PE=1 SV=1; Isoform 4 of Serine/threonine-protein kinase WNK1 OS=Mus musculus OX=10090 GN=Wnk1; Isoform 7 of Serine/threonine-protein kinase WNK2 OS=Mus musculus OX=10090 GN=Wnk2; Serine/threonine-protein kinase WNK4 OS=Mus musculus OX=10090 GN=Wnk4 PE=1 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Wnk3 PE=1 SV=1; Serine/threonine-protein kinase WNK3 OS=Mus musculus OX=10090 GN=Wnk3 PE=1 SV=3; Isoform 3 of Serine/threonine-protein kinase WNK2 OS=Mus musculus OX=10090 GN=Wnk2 0 3 3 0.4647 0 1 1 1 421.5899 1262.75516 1262.75307 1.66 0.0007 0/0 0 0 10673644 HCD 30 MS2 53.27811 594.3 64.511 55.8977 15721 15721 15719 QEplus033719.raw F4 1425.2 318.9 456.9 344.7 403.2 617.1 511 3.12 1 FALSE 3.35E-05 0.001365 0.634 -250 69096 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATVLTTER [K].aTVLTTER.[K] N-Term(TMT6plex) 3 Q99KP6 Pre-mRNA-processing factor 19 OS=Mus musculus OX=10090 GN=Prpf19 PE=1 SV=1 Q99KP6; Q99KP6-2; Q99KP6-3 Pre-mRNA-processing factor 19 OS=Mus musculus OX=10090 GN=Prpf19 PE=1 SV=1; Isoform 2 of Pre-mRNA-processing factor 19 OS=Mus musculus OX=10090 GN=Prpf19; Isoform 3 of Pre-mRNA-processing factor 19 OS=Mus musculus OX=10090 GN=Prpf19 0 2 2 0.415 0 1 1 1 560.33173 1119.65618 1119.6571 -0.83 -0.00046 0/0 0 0 52230900 HCD 30 MS2 22.91459 674.7 27.069 55.8999 15722 15722 15719 QEplus033719.raw F4 714.2 562.3 785.8 618.9 636.1 730.7 212 2.94 1 FALSE 1.14E-05 0.0007863 0.683 -250 69111 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGRPLVASK [K].dGRPLVASk.[K] N-Term(TMT6plex); K9(TMT6plex) 5 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.6171 0 1 1 1 467.62576 1400.86274 1400.86257 0.12 0.00006 0/0 0 0 19717486 HCD 30 MS2 46.0593 1220.9 79.772 55.9067 15725 15725 15719 QEplus033719.raw F4 1305.5 592.7 1190.3 1600.5 744.2 1892.3 356 2.69 2 FALSE 0.0008805 0.01222 0.37 -250 69114 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CLSSSLR [R].cLSSSLR.[C] N-Term(TMT6plex); C1(Carbamidomethyl) 2 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 A0A0R4J0I9; Q91ZX7 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 0 2 2 0.235 0 1 1 1 526.29297 1051.57866 1051.57675 1.82 0.00096 0/0 0 0 17171112 HCD 30 MS2 33.57508 1273.7 110 55.9092 15726 15726 15719 QEplus033719.raw F4 1277.1 1089.9 1453.7 1159.5 1231.7 1430.3 212 2.34 1 FALSE 0.00171 0.02849 0.224 -250 69128 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDQTEYLEERR [K].eDQTEYLEERR.[IV] N-Term(TMT6plex) 10 P07901; Q71LX8 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4;Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q3TKB9; P07901; Q3TJU7; Q3TKA2; Q3UIF3; A0PJ91; Q8C2A9; Q71LX8; Q3TKG0; Q8C5U3 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 1 3 3 0.6993 0 1 1 1 566.28278 1696.83377 1696.83396 -0.11 -0.00006 0/0 0 0 15521100 HCD 30 MS2 8.328671 743.2 110 55.9139 15728 15728 15719 QEplus033719.raw F4 775.1 608.4 806 602.4 885.3 782.1 184 5.72 2 FALSE 1.14E-05 4.09E-11 2.071 -250 69133 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MSPAMSPAR [R].mSPAMSPAR.[M] N-Term(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.4615 0 1 1 1 588.80786 1176.60845 1176.60667 1.51 0.00089 0/0 0 0 10984422 HCD 30 MS2 15.48725 1070.7 110 55.9165 15729 15729 15719 QEplus033719.raw F4 1312.6 517.7 1054.7 1238.4 799.2 1501.8 170 2.86 2 FALSE 3.35E-05 0.001338 0.636 -250 69139 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQQDMMR [R].mQQDMMR.[S] N-Term(TMT6plex) 2 Q8K4Q8 Collectin-12 OS=Mus musculus OX=10090 GN=Colec12 PE=1 SV=1 Q8K4Q8; A0A452J8C7 Collectin-12 OS=Mus musculus OX=10090 GN=Colec12 PE=1 SV=1; Collectin-12 OS=Mus musculus OX=10090 GN=Colec12 PE=1 SV=1 0 2 2 0.7095 0 1 1 1 584.77802 1168.54875 1168.54744 1.13 0.00066 0/0 0 0 11061465 HCD 30 MS2 19.60778 906.7 110 55.9238 15731 15731 15730 QEplus033719.raw F4 704.1 1049.6 1229.8 671.7 847.8 937.3 39 2.41 1 FALSE 0.001177 0.0158 0.323 -250 69173 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQDEMNLER [R].dQDEMNLER.[G] N-Term(TMT6plex) 3 B9EJ37 SH3 and PX domains 2B OS=Mus musculus OX=10090 GN=Sh3pxd2b PE=2 SV=1 B9EJ37; A2AAY5; A0A5F8MPP7 SH3 and PX domains 2B OS=Mus musculus OX=10090 GN=Sh3pxd2b PE=2 SV=1; SH3 and PX domain-containing protein 2B OS=Mus musculus OX=10090 GN=Sh3pxd2b PE=1 SV=1; SH3 and PX domain-containing protein 2B OS=Mus musculus OX=10090 GN=Sh3pxd2b PE=1 SV=1 0 2 2 0.7323 0 1 1 1 689.82709 1378.6469 1378.64701 -0.08 -0.00006 0/0 0 0 6898125 HCD 30 MS2 33.80767 458.9 110 55.9433 15739 15739 15730 QEplus033719.raw F4 406.9 402.9 536.2 372 546.4 488.8 51 3.25 1 FALSE 1.14E-05 8.93E-06 1.057 -250 69178 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGFAGDDAPR [K].aGFAGDDAPR.[A] N-Term(TMT6plex) 36 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q3UAF6; Q3UD81; Q3U122; E9Q1F2; Q3UAA9; F6WX90; A0A1D5RM20; B2RRX1; A0A494B9T3; Q3U5R4; A1E281; Q3UAF7; G3UZ07; P62737; G3UYG0; P68134; Q3UBP6; D3YZY0; E9Q5F4; B1ATY1; P68033; P63260; Q61852; Q3UA89; Q3UGS0; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=4 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 2 2 0.6722 0 1 1 1 603.31146 1205.61565 1205.61122 3.68 0.00222 0/0 0 0 6107300 HCD 30 MS2 20.14862 798.9 110 55.9458 15740 15740 15730 QEplus033719.raw F4 553.7 817.9 676.7 578.1 1316.4 850.8 167 2.99 4 FALSE 1.14E-05 3.72E-06 1.129 -250 69183 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQPVQSKPQK [R].aQPVQSkPQk.[AV] N-Term(TMT6plex); K7(TMT6plex); K10(TMT6plex) 6 Q3TJD7 PDZ and LIM domain protein 7 OS=Mus musculus OX=10090 GN=Pdlim7 PE=1 SV=1 B8JJB3; Q8BVJ7; B8JJB2; Q3TJD7-2; Q3TJD7; Q3TJD7-3 PDZ and LIM domain protein 7 OS=Mus musculus OX=10090 GN=Pdlim7 PE=1 SV=1; PDZ and LIM domain protein 7 OS=Mus musculus OX=10090 GN=Pdlim7 PE=1 SV=1; PDZ and LIM domain protein 7 (Fragment) OS=Mus musculus OX=10090 GN=Pdlim7 PE=1 SV=1; Isoform 2 of PDZ and LIM domain protein 7 OS=Mus musculus OX=10090 GN=Pdlim7; PDZ and LIM domain protein 7 OS=Mus musculus OX=10090 GN=Pdlim7 PE=1 SV=1; Isoform 3 of PDZ and LIM domain protein 7 OS=Mus musculus OX=10090 GN=Pdlim7 0 3 3 0.6966 0 1 1 1 600.04358 1798.11618 1798.11538 0.45 0.00027 0/0 0 0 16671459 HCD 30 MS2 30.2379 959.7 95.973 55.9531 15742 15742 15741 QEplus033719.raw F4 1044.8 800.9 974.1 762.6 1393.6 782.2 189 3.23 1 FALSE 1.14E-05 1.38E-05 1.021 -250 69236 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNLGPK [R].tNLGPk.[G] N-Term(TMT6plex); K6(TMT6plex) 5 Q52KG9 "Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1" Q52KG9; Q3TI62; Q3TW97; Q3TI05; Q3TIX8 "Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1" 0 2 2 0.25 0 1 1 1 544.34784 1087.6884 1087.68757 0.77 0.00042 0/0 0 0 26620460 HCD 30 MS2 29.82915 1484.8 71.699 55.9666 15748 15748 15741 QEplus033719.raw F4 1810.7 1097.5 1513.9 1334.3 1688 1464.5 167 1.6 1 FALSE 0.005497 0.09306 0.026 -250 69246 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSAGVDDQENWHEGK [K].rSAGVDDQENWHEGk.[E] N-Term(TMT6plex); K15(TMT6plex) 2 Q9CPY7 Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 PE=1 SV=3 Q9CPY7; Q9CPY7-2 Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 PE=1 SV=3; Isoform 2 of Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 1 4 4 0.5518 0 1 1 1 547.28107 2186.10244 2186.09906 1.54 0.00084 0/0 0 0 11637337 HCD 30 MS2 8.337053 745.6 110 55.9691 15749 15749 15741 QEplus033719.raw F4 953.8 562.4 806.2 664.8 736.1 750.2 250 5.69 1 FALSE 1.14E-05 4.26E-11 2.067 -250 69254 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TMQNTSDLDTAR [R].tMQNTSDLDTAR.[C] N-Term(TMT6plex) 1 Q02257 Junction plakoglobin OS=Mus musculus OX=10090 GN=Jup PE=1 SV=3 Q02257 Junction plakoglobin OS=Mus musculus OX=10090 GN=Jup PE=1 SV=3 0 2 2 0.7422 0 1 1 1 791.39203 1581.77678 1581.774 1.76 0.00139 0/0 0 0 8855714 HCD 30 MS2 0 370.8 110 55.9717 15750 15750 15741 QEplus033719.raw F4 344.8 367.2 438.1 264.3 377.8 432.4 145 3.84 1 FALSE 1.14E-05 6.80E-10 1.839 -250 69269 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETIEQEK [K].eTIEQEk.[EQR] N-Term(TMT6plex); K7(TMT6plex) 6 P20065 Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x PE=1 SV=1 Q9D2R9; A2AEH9; P20065-2; P20065; A6H6H4; P21752 Thymosin beta OS=Mus musculus OX=10090 GN=Tmsb15a PE=2 SV=1; Thymosin beta 15a OS=Mus musculus OX=10090 GN=Tmsb15a PE=3 SV=1; Isoform Short of Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x; Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x PE=1 SV=1; Thymosin beta OS=Mus musculus OX=10090 GN=Tmsb10 PE=1 SV=1; SWISS-PROT:P21752 (Bos taurus) Thymosin beta-9 0 2 2 0.2259 0 1 1 1 667.88275 1334.75823 1334.75677 1.09 0.00073 0/0 0 0 1752676992 HCD 30 MS2 4.889292 780.7 1.155 55.9812 15753 15753 15752 QEplus033719.raw F4 754.6 484.9 806.8 777.4 879.9 980.6 463 3.01 1 TRUE 0.001607 0.02517 0.243 -250 69275 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPGAAEPSPDGTTGHTYNQYTQR [R].rPGAAEPSPDGTTGHTYNQYTQR.[Y] N-Term(TMT6plex) 14 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q99KD0; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 4 4 0.8388 0 1 1 1 684.08466 2733.31679 2733.31783 -0.38 -0.00026 0/0 0 0 21834106 HCD 30 MS2 8.539639 223.7 110 55.9862 15755 15755 15752 QEplus033719.raw F4 212.3 206.3 253.6 297.7 188.9 183.2 168 8.81 3 FALSE 1.14E-05 6.31E-16 3.361 -250 69278 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMLQVHGGSGPR [R].aMLQVHGGSGPR.[V] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 3 3 0.5365 0 1 1 1 480.26364 1438.77637 1438.77863 -1.57 -0.00075 0/0 0 0 30196394 HCD 30 MS2 46.97514 724.1 49.131 55.9885 15756 15756 15752 QEplus033719.raw F4 716.3 650.4 805.2 596.4 796.4 779.8 273 4.66 2 FALSE 1.14E-05 3.56E-09 1.702 -250 69287 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLQEQADAAEER [R].sLQEQADAAEER.[A] N-Term(TMT6plex) 7 E9Q456; G5E8R2; G5E8R1 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 E9Q456; E9Q455; G5E8R2; E9Q453; G5E8R1; S4R261; G5E8R0 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 0 2 2 0.7886 0 1 1 1 788.39587 1575.78447 1575.78119 2.08 0.00164 0/0 0 0 5069641 HCD 30 MS2 0 231.1 110 55.991 15757 15757 15752 QEplus033719.raw F4 206.7 311.1 262.7 154 258.1 193.8 138 4.92 3 FALSE 1.14E-05 3.26E-12 2.279 -250 69292 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DASPNQVAEK [K].dASPNQVAEk.[V] N-Term(TMT6plex); K10(TMT6plex) 2 O70378 ER membrane protein complex subunit 8 OS=Mus musculus OX=10090 GN=Emc8 PE=1 SV=1 O70378; M0QWY0 ER membrane protein complex subunit 8 OS=Mus musculus OX=10090 GN=Emc8 PE=1 SV=1; ER membrane protein complex subunit 8 (Fragment) OS=Mus musculus OX=10090 GN=Emc8 PE=1 SV=1 0 2 2 0.7251 0 1 1 1 758.92175 1516.83623 1516.83714 -0.6 -0.00046 0/0 0 0 5015607.5 HCD 30 MS2 0 358.7 110 55.9936 15758 15758 15752 QEplus033719.raw F4 358.1 335.9 380.8 302.4 390 385.3 338 4.22 1 FALSE 1.14E-05 2.12E-06 1.175 -250 69300 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KSEMAPAQGQK [K].kSEMAPAQGQk.[A] N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex) 12 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 Q99PL5-10; Q99PL5-11; A2AVJ7; Q99PL5-6; Q99PL5-4; Q99PL5-9; Q99PL5-7; Q99PL5; Q99PL5-8; Q99PL5-5; Q99PL5-3; Q99PL5-2 Isoform RRp2 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp1.8 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Isoform RRp15a of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp41 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp5.4 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp15b of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; Isoform RRp10 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp16.8 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp47 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp61 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 1 3 3 0.7033 0 1 1 1 621.36469 1862.0795 1862.07728 1.19 0.00074 0/0 0 0 16682294 HCD 30 MS2 12.16888 996 110 55.9961 15759 15759 15752 QEplus033719.raw F4 960.8 865.9 973.8 814.7 1546.9 813.8 469 5.46 1 FALSE 1.14E-05 1.65E-15 2.905 -250 69307 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHSECGVLEK [K].sHSEcGVLEk.[A] N-Term(TMT6plex); C5(Carbamidomethyl); K10(TMT6plex) 2 Q8R4Z6 RNA helicase OS=Mus musculus OX=10090 GN=Ddx20 PE=2 SV=1 Q8R4Z6; Q9JJY4 RNA helicase OS=Mus musculus OX=10090 GN=Ddx20 PE=2 SV=1; Probable ATP-dependent RNA helicase DDX20 OS=Mus musculus OX=10090 GN=Ddx20 PE=1 SV=2 0 3 3 0.4201 0 1 1 1 535.2901 1603.85575 1603.85141 2.7 0.00144 0/0 0 0 11345195 HCD 30 MS2 69.09925 877 96.585 55.9983 15760 15760 15752 QEplus033719.raw F4 919 770.8 1054.5 707.1 970.4 840.2 337 1.69 1 FALSE 0.001231 0.01662 0.314 -250 69317 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMEEEAEK [R].eMEEEAEk.[L] N-Term(TMT6plex); K8(TMT6plex) 5 Q8CCS6 Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3 Q8CCS6-2; Q8CCS6; D3YUB9; D3Z5F7; G3UY42 Isoform 2 of Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1; Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3; Polyadenylate-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=2; Predicted gene 20521 OS=Mus musculus OX=10090 GN=Gm20521 PE=3 SV=1; Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=1 0 2 2 0.6226 0 1 1 1 726.86847 1452.72966 1452.72923 0.3 0.00022 0/0 0 0 4397917 HCD 30 MS2 0 569.3 110 56.0034 15762 15762 15752 QEplus033719.raw F4 609.3 543.9 598.2 411.3 695.9 556.9 153 3.63 1 FALSE 3.35E-05 0.00137 0.634 -250 69333 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPQNATDSYPHK [K].gPQNATDSYPHk.[Q] N-Term(TMT6plex); K12(TMT6plex) 3 Q922V4 Pleiotropic regulator 1 OS=Mus musculus OX=10090 GN=Plrg1 PE=1 SV=1 Q922V4; F8WI31; D3Z4V1 Pleiotropic regulator 1 OS=Mus musculus OX=10090 GN=Plrg1 PE=1 SV=1; Pleiotropic regulator 1 OS=Mus musculus OX=10090 GN=Plrg1 PE=1 SV=1; Pleiotropic regulator 1 OS=Mus musculus OX=10090 GN=Plrg1 PE=1 SV=1 0 3 3 0.6289 0 1 1 1 591.65076 1772.93772 1772.93317 2.57 0.00152 0/0 0 0 2341705.5 HCD 30 MS2 41.10844 350.5 110 56.0132 15765 15765 15763 QEplus033719.raw F4 347.1 257.9 359.6 317 427 394.3 371 3.53 1 FALSE 1.14E-05 6.68E-07 1.271 -250 69350 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSVTATR [K].lSVTATR.[E] N-Term(TMT6plex) 2 Q9DB77 "Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrc2 PE=1 SV=1" A0A140LI98; Q9DB77 "Cytochrome b-c1 complex subunit 2, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Uqcrc2 PE=1 SV=1; Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrc2 PE=1 SV=1" 0 2 2 0.5388 0 1 1 1 488.80362 976.59996 976.59886 1.13 0.00055 0/0 0 0 15650348 HCD 30 MS2 35.9488 1224.2 110 56.0202 15768 15768 15763 QEplus033719.raw F4 1323.1 914.6 1343.3 1231.9 1051.7 1480.4 35 2.32 1 FALSE 0.001066 0.0137 0.349 -250 69366 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDPHEATCYDDGK [K].cDPHEATcYDDGk.[T] N-Term(TMT6plex); C1(Carbamidomethyl); C8(Carbamidomethyl); K13(TMT6plex) 14 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q99KD0; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.9581 0 1 1 1 1013.45807 2025.90886 2025.90465 2.08 0.00211 0/0 0 0 8526126 HCD 30 MS2 0 347.9 110 56.0252 15770 15770 15763 QEplus033719.raw F4 330.6 309.8 408 489.6 214 335.2 35 4.54 3 FALSE 1.14E-05 1.66E-12 2.335 -250 69371 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTVGSVK [K].tTVGSVk.[W] N-Term(TMT6plex); K7(TMT6plex) 1 P35585 AP-1 complex subunit mu-1 OS=Mus musculus OX=10090 GN=Ap1m1 PE=1 SV=3 P35585 AP-1 complex subunit mu-1 OS=Mus musculus OX=10090 GN=Ap1m1 PE=1 SV=3 0 2 2 0.3374 0 1 1 1 575.36664 1149.726 1149.72434 1.44 0.00083 0/0 0 0 7426407 HCD 30 MS2 18.33358 1279.6 110 56.0278 15771 15771 15763 QEplus033719.raw F4 1782.9 836.2 1145.8 1335.8 1399 1178.1 113 2.46 1 FALSE 0.001001 0.01322 0.356 -250 69381 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGGGGAGGSVPGIER [K].qGGGGAGGSVPGIER.[M] N-Term(TMT6plex) 10 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; Q9D0E1-2; Q3TQ66; Q3TL61; F6W322; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 2 2 0.798 0 1 1 1 764.40924 1527.8112 1527.80768 2.3 0.00176 0/0 0 0 5552118 HCD 30 MS2 0 294.9 110 56.0303 15772 15772 15763 QEplus033719.raw F4 287 303.5 339.3 222.9 332.6 284.1 298 4.06 1 FALSE 1.14E-05 8.71E-13 2.388 -250 69388 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TCNCETEDYGEK [K].tcNcETEDYGEk.[F] N-Term(TMT6plex); C2(Carbamidomethyl); C4(Carbamidomethyl); K12(TMT6plex) 10 Q8C290 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1 Q8C290; Q8VEK3-2; Q3ULH5; Q3TVV6; Q3TXW2; Q3TGN5; O88568; Q3TWN5; Q3TS50; Q8VEK3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; B30.2/SPRY domain-containing protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Heterogenous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; B30.2/SPRY domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=1 SV=1 0 2 2 0.9125 0 1 1 1 982.44354 1963.87981 1963.87776 1.04 0.00102 0/0 0 0 2745329.25 HCD 30 MS2 0 373 110 56.0328 15773 15773 15763 QEplus033719.raw F4 390.4 328.3 430 251.6 476.7 361.3 20 4.23 1 FALSE 1.14E-05 1.64E-10 1.956 -250 69392 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETIEQEK [K].eTIEQEk.[EQR] N-Term(TMT6plex); K7(TMT6plex) 6 P20065 Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x PE=1 SV=1 Q9D2R9; A2AEH9; P20065-2; P20065; A6H6H4; P21752 Thymosin beta OS=Mus musculus OX=10090 GN=Tmsb15a PE=2 SV=1; Thymosin beta 15a OS=Mus musculus OX=10090 GN=Tmsb15a PE=3 SV=1; Isoform Short of Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x; Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x PE=1 SV=1; Thymosin beta OS=Mus musculus OX=10090 GN=Tmsb10 PE=1 SV=1; SWISS-PROT:P21752 (Bos taurus) Thymosin beta-9 0 3 3 0.3243 0 1 1 1 445.59064 1334.75736 1334.75677 0.44 0.0002 0/0 0 0 424060704 HCD 30 MS2 8.94467 389.5 3.028 56.0401 15775 15775 15774 QEplus033719.raw F4 379.3 246.7 394.2 383.5 443.1 490.2 463 2.96 1 TRUE 0.009274 0.1709 -0.109 -250 69408 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FTIGDHSR [K].fTIGDHSR.[F] N-Term(TMT6plex) 7 O88342 WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3 Q3TNK2; O88342; Q9DC08; Q3TE06; Q3U136; Q9DBM8; Q80ZI9 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat domain 1 (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1 0 3 3 0.5491 0 1 1 1 387.87869 1161.62152 1161.62139 0.12 0.00005 0/0 0 0 46754444 HCD 30 MS2 4.129103 258.1 24.318 56.0446 15777 15777 15774 QEplus033719.raw F4 276.6 220.5 247.5 163.9 437.4 202.9 230 3.77 1 FALSE 1.14E-05 9.90E-05 0.858 -250 69414 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECAEEPVGK [K].ecAEEPVGk.[G] N-Term(TMT6plex); C2(Carbamidomethyl); K9(TMT6plex) 3 F8WHM5 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 F8WHM5; Q61543; E9PWD8 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 0 2 2 0.6984 0 1 1 1 738.89252 1476.77776 1476.77685 0.61 0.00045 0/0 0 0 10219532 HCD 30 MS2 21.73109 653.9 110 56.0472 15778 15778 15774 QEplus033719.raw F4 648.3 612.2 742.2 541.9 723.6 655.4 264 3.15 1 FALSE 1.14E-05 5.25E-06 1.101 -250 69416 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FSSQQASTK [K].fSSQQASTk.[Q] N-Term(TMT6plex); K9(TMT6plex) 4 Q99JF8 PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1 PE=1 SV=1 Q99JF8; Q05CD2; Q99JF8-2; A2BI12 PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1 PE=1 SV=1; Psip1 protein (Fragment) OS=Mus musculus OX=10090 GN=Psip1 PE=2 SV=1; Isoform 2 of PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1; PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1 PE=1 SV=1 0 2 2 0.6809 0 1 1 1 721.40918 1441.81108 1441.80511 4.14 0.00298 0/0 0 0 5886656 HCD 30 MS2 16.03386 528.4 110 56.0497 15779 15779 15774 QEplus033719.raw F4 509.6 622.6 525.7 350.8 747 414.8 361 3.76 1 FALSE 1.14E-05 7.01E-06 1.077 -250 69438 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQCLCRPGYAGASCER [R].tQcLcRPGYAGAScER.[C] N-Term(TMT6plex); C3(Carbamidomethyl); C5(Carbamidomethyl); C14(Carbamidomethyl) 1 Q61001 Laminin subunit alpha-5 OS=Mus musculus OX=10090 GN=Lama5 PE=1 SV=4 Q61001 Laminin subunit alpha-5 OS=Mus musculus OX=10090 GN=Lama5 PE=1 SV=4 0 3 3 0.6925 0 1 1 1 705.66156 2114.97013 2114.97313 -1.42 -0.001 0/0 0 0 2323240.5 HCD 30 MS2 16.95413 213.2 110 56.0572 15782 15782 15774 QEplus033719.raw F4 194.5 219.6 271.5 183 196.3 214.1 57 4.13 1 FALSE 1.14E-05 3.10E-06 1.144 -250 69450 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGQSEEIQK [K].kGQSEEIQk.[K] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 2 Q3UW40 TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1 Q3UW40; Q8BP67 TRASH domain-containing protein OS=Mus musculus OX=10090 GN=Rpl24 PE=2 SV=1; 60S ribosomal protein L24 OS=Mus musculus OX=10090 GN=Rpl24 PE=1 SV=2 1 3 3 0.4746 0 1 1 1 578.68414 1734.03788 1734.03646 0.82 0.00047 0/0 0 0 26360432 HCD 30 MS2 8.127101 1535.6 110 56.062 15784 15784 15774 QEplus033719.raw F4 1742.7 1143.3 1718.4 1745.4 1493.6 1370.4 421 3.94 1 FALSE 1.14E-05 2.08E-09 1.747 -250 69466 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSTTAEKTEEEEK [K].tSTTAEkTEEEEk.[E] N-Term(TMT6plex); K7(TMT6plex); K13(TMT6plex) 1 Q61655 ATP-dependent RNA helicase DDX19A OS=Mus musculus OX=10090 GN=Ddx19a PE=1 SV=2 Q61655 ATP-dependent RNA helicase DDX19A OS=Mus musculus OX=10090 GN=Ddx19a PE=1 SV=2 1 3 3 0.5663 0 1 1 1 724.06049 2170.1669 2170.16938 -1.14 -0.00083 0/0 0 0 4061426.75 HCD 30 MS2 0 321.1 110 56.0718 15787 15787 15785 QEplus033719.raw F4 327.7 265.5 340.4 225.1 444.6 323.5 467 2.79 1 FALSE 1.14E-05 1.95E-06 1.182 -250 69471 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIMATNR [K].vIMATNR.[AI] N-Term(TMT6plex) 14 A0A1S6GWH1; Q569X4; P62192 AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc5 PE=2 SV=1;26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1;26S proteasome regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmc1 PE=1 SV=1 A0A140LIZ5; A0A1S6GWH1; Q8BKU2; Q8K1K2; Q569X4; Q99KR1; Q3TJ97; Q52L53; Q3TUN5; Q3UBF0; Q3TFA5; P62196; P62192; P54775 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=1 SV=1; AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc5 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmc5 PE=1 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; Psmc5 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc5 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; Psmc4 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 (Fragment) OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmc5 PE=1 SV=1; 26S proteasome regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmc1 PE=1 SV=1; 26S proteasome regulatory subunit 6B OS=Mus musculus OX=10090 GN=Psmc4 PE=1 SV=2 0 2 2 0.4407 0 1 1 1 517.30579 1033.6043 1033.60257 1.67 0.00086 0/0 0 0 44909632 HCD 30 MS2 15.03631 774.1 27.575 56.0741 15788 15788 15785 QEplus033719.raw F4 904 589.1 855.6 735.7 700 860 243 2.7 3 FALSE 0.0003496 0.006592 0.466 -250 69491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGQEDQGLTK [R].eGQEDQGLTk.[D] N-Term(TMT6plex); K10(TMT6plex) 20 Q8K144; G3UXA6 Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1;Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1 Q8BHD7-2; Q3TQW3; G3UXZ8; G3UZ01; P17225; Q8K144; Q8R509; Q3UBR5; Q923A7; Q922I7; Q8CB58; Q8BGJ5; G3UXA6; Q5RJV5; Q6NZB8; Q3U5I2; Q3T984; Q8BHD7; Q80T07; G8JL74 Isoform 2 of Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=8; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=2; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypirimidine tract binding protein OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Ptbp1 protein OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1 0 2 2 0.6842 0 1 1 1 781.92566 1562.84404 1562.84262 0.91 0.00071 0/0 0 0 15748153 HCD 30 MS2 4.363522 789.6 110 56.0811 15791 15791 15785 QEplus033719.raw F4 814.3 942.2 875.7 479.5 992.7 633.1 360 4.37 2 FALSE 1.14E-05 4.08E-08 1.501 -250 69497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CTLEGTK [K].cTLEGTk.[K] N-Term(TMT6plex); C1(Carbamidomethyl); K7(TMT6plex) 5 A0A1L1SSH9 Osteonectin OS=Mus musculus OX=10090 GN=Sparc PE=1 SV=1 A0A1L1SSH9; P07214; Q3TXI6; Q5NCU3; Q5NCU4 Osteonectin OS=Mus musculus OX=10090 GN=Sparc PE=1 SV=1; SPARC OS=Mus musculus OX=10090 GN=Sparc PE=1 SV=1; Osteonectin OS=Mus musculus OX=10090 GN=Sparc PE=2 SV=1; Osteonectin (Fragment) OS=Mus musculus OX=10090 GN=Sparc PE=1 SV=1; Osteonectin OS=Mus musculus OX=10090 GN=Sparc PE=1 SV=1 0 2 2 0.3968 0 1 1 1 633.86078 1266.71428 1266.71279 1.17 0.00074 0/0 0 0 15740666 HCD 30 MS2 30.89454 1500.1 110 56.0836 15792 15792 15785 QEplus033719.raw F4 1560.9 1189.4 1577.7 1288.7 1831.7 1552.5 336 2.52 1 FALSE 0.000565 0.008603 0.428 -250 69505 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSQSSSQQFSGIGR [R].sSQSSSQQFSGIGR.[S] N-Term(TMT6plex) 5 Q501J6 Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1 Q501J6; Q3U741; Q78W10; Q3U6Y5; Q8K392 Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ddx17 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ddx17 PE=2 SV=1; DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 OS=Mus musculus OX=10090 GN=Ddx17 PE=2 SV=2 0 2 2 0.8073 0 1 1 1 842.92731 1684.84734 1684.84519 1.27 0.00107 0/0 0 0 9259502 HCD 30 MS2 0 345.1 110 56.0861 15793 15793 15785 QEplus033719.raw F4 334.2 354.3 422.2 233.5 422.2 304.4 183 5.45 1 FALSE 1.14E-05 4.04E-15 2.831 -250 69520 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPMQTGIK [R].ePmQTGIk.[A] N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 0 2 2 0.4299 0 1 1 1 689.39496 1377.78264 1377.78121 1.04 0.00072 0/0 0 0 4969102 HCD 30 MS2 47.88726 615.5 110 56.0912 15795 15795 15785 QEplus033719.raw F4 624.7 421.2 702 585.8 638.4 720.6 462 2.21 1 FALSE 0.001108 0.01447 0.339 -250 69524 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPPGPPGK [RK].gPPGPPGk.[ND] N-Term(TMT6plex); K8(TMT6plex) 5 B1AWB9; O88207-2; P11087 "Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1;Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1;Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4" P11087-2; B1AWB9; O88207-2; Q61022; P11087 "Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1; Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1; Alpha-1 type 1 collagen (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4" 0 2 2 0.6382 0 1 1 1 582.86121 1164.71514 1164.71411 0.88 0.00051 0/0 0 0 71855872 HCD 30 MS2 13.10048 888.3 23.095 56.0985 15797 15797 15796 QEplus033719.raw F4 824.4 885.1 1024.6 366.5 1236.7 992.7 193 2.46 3 FALSE 0.0004793 0.007626 0.446 -250 69544 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHAMLAK [R].eHAMLAk.[T] N-Term(TMT6plex); K7(TMT6plex) 6 Q8CCV1 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Gspt1 PE=2 SV=1 Q8CCV1; Q3UL02; Q8BPH0; Q8R050; Q149F3; Q8R050-2 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Gspt1 PE=2 SV=1; Tr-type G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gspt1 PE=2 SV=1; Tr-type G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gspt1 PE=2 SV=1; Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus OX=10090 GN=Gspt1 PE=1 SV=2; Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Mus musculus OX=10090 GN=Gspt2 PE=1 SV=1; Isoform 2 of Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus OX=10090 GN=Gspt1 0 3 3 0.6731 0 1 1 1 419.91812 1257.73981 1257.73895 0.69 0.00029 0/0 0 0 50471940 HCD 30 MS2 39.72649 562.8 23.304 56.1052 15800 15800 15796 QEplus033719.raw F4 600.2 452.1 560.5 529.9 643.6 590.4 369 3.64 1 FALSE 0.0005556 0.008426 0.431 -250 69546 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGQEDQGLTK [R].eGQEDQGLTk.[D] N-Term(TMT6plex); K10(TMT6plex) 20 Q8K144; G3UXA6 Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1;Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1 Q8BHD7-2; Q3TQW3; G3UXZ8; G3UZ01; P17225; Q8K144; Q8R509; Q3UBR5; Q923A7; Q922I7; Q8CB58; Q8BGJ5; G3UXA6; Q5RJV5; Q6NZB8; Q3U5I2; Q3T984; Q8BHD7; Q80T07; G8JL74 Isoform 2 of Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=8; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=2; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypirimidine tract binding protein OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Ptbp1 protein OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1; Polypyrimidine tract-binding protein 1 OS=Mus musculus OX=10090 GN=Ptbp1 PE=2 SV=1; Polypyrimidine tract-binding protein 3 OS=Mus musculus OX=10090 GN=Ptbp3 PE=1 SV=1 0 3 3 0.7097 0 1 1 1 521.61932 1562.84342 1562.84262 0.51 0.00027 0/0 0 0 21748082 HCD 30 MS2 23.47415 962.6 49.738 56.1075 15801 15801 15796 QEplus033719.raw F4 1003.9 923.8 1087.1 731.6 1092.8 936.3 362 4.03 2 FALSE 1.14E-05 2.61E-06 1.158 -250 69552 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDCQECPEGYR [K].mDcQEcPEGYR.[V] N-Term(TMT6plex); C3(Carbamidomethyl); C6(Carbamidomethyl) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; Q4FZG4; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Flna protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.892 0 1 1 1 837.35016 1673.69304 1673.69193 0.66 0.00056 0/0 0 0 12351499 HCD 30 MS2 20.01204 844.8 110 56.11 15802 15802 15796 QEplus033719.raw F4 775.8 854.7 886.2 635.2 1160.5 756.6 4 4.26 1 FALSE 1.14E-05 1.14E-06 1.227 -250 69555 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENSNESFISR [K].eNSNESFISR.[L] N-Term(TMT6plex) 3 B7ZP20 Ankyrin repeat and FYVE domain containing 1 OS=Mus musculus OX=10090 GN=Ankfy1 PE=2 SV=1 B7ZP20; Q810B6; Q810B6-2 Ankyrin repeat and FYVE domain containing 1 OS=Mus musculus OX=10090 GN=Ankfy1 PE=2 SV=1; Rabankyrin-5 OS=Mus musculus OX=10090 GN=Ankfy1 PE=1 SV=2; Isoform 2 of Rabankyrin-5 OS=Mus musculus OX=10090 GN=Ankfy1 0 2 2 0.5489 0 1 1 1 706.35455 1411.70183 1411.70149 0.24 0.00017 0/0 0 0 5183408 HCD 30 MS2 16.82132 349.8 110 56.115 15804 15804 15796 QEplus033719.raw F4 324.9 318 420.8 288.3 376 370.9 127 3.48 1 FALSE 1.14E-05 5.31E-07 1.29 -250 69566 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQHEEAVVK [K].vQHEEAVVk.[L] N-Term(TMT6plex); K9(TMT6plex) 3 E9Q2X6 Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1 E9Q2X6; Q8CG47; Q6P7V9 Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1; Structural maintenance of chromosomes protein 4 OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1; Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=2 SV=1 0 3 3 0.3729 0 1 1 1 499.63315 1496.88489 1496.8837 0.8 0.0004 0/0 0 0 15643946 HCD 30 MS2 20.5248 915.7 110 56.1197 15806 15806 15796 QEplus033719.raw F4 928.3 1007 878.7 579.2 1329.3 771.4 351 4.8 1 FALSE 1.14E-05 8.37E-08 1.442 -250 69575 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPGAAEPSPDGTTGHTYNQYTQR [R].rPGAAEPSPDGTTGHTYNQYTQR.[Y] N-Term(TMT6plex) 14 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q99KD0; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.8838 0 1 1 1 911.77948 2733.32389 2733.31783 2.21 0.00202 0/0 0 0 3511020 HCD 30 MS2 0 44.4 110 56.1271 15808 15808 15807 QEplus033719.raw F4 42.2 41.3 48.4 64 36.1 34.6 181 8 3 FALSE 1.14E-05 6.31E-16 5.508 -250 69581 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ACSLAK [K].acSLAk.[T] N-Term(TMT6plex); C2(Carbamidomethyl); K6(TMT6plex) 4 Q9CQV8; P63101 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3;14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 Q9CQV8-2; Q9CQV8; Q3UA58; P63101 Isoform Short of 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab; 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3; 14_3_3 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=2 SV=1; 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 0 2 2 0.2609 0 1 1 1 554.33405 1107.66081 1107.65964 1.06 0.00059 0/0 0 0 110771528 HCD 30 MS2 9.809481 1133.7 14.786 56.1318 15810 15810 15807 QEplus033719.raw F4 1418.4 990.6 1437.7 945.7 1032.3 977.3 117 2.3 2 FALSE 0.007216 0.1142 -0.03 -250 69591 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDPVVSYR [K].sDPVVSYR.[E] N-Term(TMT6plex) 17 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q3TSK4; Q8C153; P58252; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3TPG2; Q3UZ14; Q3TK17; Q99LT6; Q3TLB1; Q3TWX1; Q3TX47 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 0 2 2 0.4398 0 1 1 1 576.3175 1151.62773 1151.6258 1.68 0.00096 0/0 0 0 26293610 HCD 30 MS2 36.7351 1271.7 62.997 56.1341 15811 15811 15807 QEplus033719.raw F4 1415.5 836.8 1451.3 1207.1 1214.7 1504.8 234 2.66 1 FALSE 1.14E-05 0.0001204 0.842 -250 69610 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TCNCETEDYGEK [K].tcNcETEDYGEk.[F] N-Term(TMT6plex); C2(Carbamidomethyl); C4(Carbamidomethyl); K12(TMT6plex) 10 Q8C290 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1 Q8C290; Q8VEK3-2; Q3ULH5; Q3TVV6; Q3TXW2; Q3TGN5; O88568; Q3TWN5; Q3TS50; Q8VEK3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; B30.2/SPRY domain-containing protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Heterogenous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; B30.2/SPRY domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=1 SV=1 0 3 3 0.9322 0 1 1 1 655.29791 1963.87918 1963.87776 0.72 0.00047 0/0 0 0 19335480 HCD 30 MS2 24.5982 758.5 110 56.1392 15813 15813 15807 QEplus033719.raw F4 730 651.7 847.5 610.6 928.9 782.6 20 4.13 1 FALSE 1.14E-05 3.87E-07 1.316 -250 69629 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KSEMAPAQGQK [K].kSEMAPAQGQk.[A] N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex) 12 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 Q99PL5-10; Q99PL5-11; A2AVJ7; Q99PL5-6; Q99PL5-4; Q99PL5-9; Q99PL5-7; Q99PL5; Q99PL5-8; Q99PL5-5; Q99PL5-3; Q99PL5-2 Isoform RRp2 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp1.8 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Isoform RRp15a of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp41 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp5.4 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp15b of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; Isoform RRp10 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp16.8 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp47 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1; Isoform RRp61 of Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 1 4 4 0.4632 0 1 1 1 466.27496 1862.07802 1862.07728 0.4 0.00019 0/0 0 0 14046871 HCD 30 MS2 36.63914 575.2 79.162 56.1462 15816 15816 15807 QEplus033719.raw F4 883.4 423.4 605.4 430.4 550.6 557.7 477 2.72 1 FALSE 1.14E-05 0.0003849 0.744 -250 69636 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QFIAAQGSSR [K].qFIAAQGSSR.[S] N-Term(TMT6plex) 2 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 B9EIU1; Q8CGC7 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4 0 2 2 0.5379 0 1 1 1 647.35992 1293.71257 1293.71126 1.01 0.00065 0/0 0 0 9931098 HCD 30 MS2 53.4258 1184.9 110 56.1487 15817 15817 15807 QEplus033719.raw F4 1222.6 906.3 1248 1106.9 1256.2 1369.6 366 2.77 1 FALSE 1.14E-05 9.52E-06 1.051 -250 69646 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRYEDQLK [R].qRYEDQLk.[Q] N-Term(TMT6plex); K8(TMT6plex) 5 Q925I1 ATPase family AAA domain-containing protein 3 OS=Mus musculus OX=10090 GN=Atad3 PE=1 SV=1 H3BKI6; Q925I1-2; H3BK90; Q925I1; V9GWS5 "ATPase family, AAA domain-containing 3A OS=Mus musculus OX=10090 GN=Atad3a PE=1 SV=1; Isoform 2 of ATPase family AAA domain-containing protein 3 OS=Mus musculus OX=10090 GN=Atad3; ATPase family, AAA domain-containing 3A (Fragment) OS=Mus musculus OX=10090 GN=Atad3a PE=1 SV=1; ATPase family AAA domain-containing protein 3 OS=Mus musculus OX=10090 GN=Atad3 PE=1 SV=1; ATPase family, AAA domain-containing 3A (Fragment) OS=Mus musculus OX=10090 GN=Atad3a PE=1 SV=1" 1 3 3 0.4326 0 1 1 1 513.29657 1537.87516 1537.87386 0.84 0.00043 0/0 0 0 11259009 HCD 30 MS2 45.70076 1251 110 56.156 15819 15819 15818 QEplus033719.raw F4 1401.1 1141.6 1413.3 1155.5 1228.1 1166.7 402 2.82 1 FALSE 0.0008445 0.01177 0.377 -250 69653 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAPNDASYDAVR [K].dAPNDASYDAVR.[Q] N-Term(TMT6plex) 5 E9PVA8 eIF-2-alpha kinase activator GCN1 OS=Mus musculus OX=10090 GN=Gcn1 PE=1 SV=1 Q640Q4; E9PVA8; Q3UHQ5; Q8CHH7; Q8BTM7 Gcn1l1 protein (Fragment) OS=Mus musculus OX=10090 GN=Gcn1 PE=2 SV=1; eIF-2-alpha kinase activator GCN1 OS=Mus musculus OX=10090 GN=Gcn1 PE=1 SV=1; TOG domain-containing protein OS=Mus musculus OX=10090 GN=Gcn1 PE=2 SV=1; MKIAA0219 protein (Fragment) OS=Mus musculus OX=10090 GN=Gcn1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Gcn1 PE=2 SV=1 0 2 2 0.7882 0 1 1 1 761.87189 1522.7365 1522.73352 1.96 0.00149 0/0 0 0 8542972 HCD 30 MS2 0 361.3 110 56.1586 15820 15820 15818 QEplus033719.raw F4 347.5 295.2 413.6 314.8 405.4 391.1 102 4.25 1 FALSE 1.14E-05 1.49E-11 2.154 -250 69660 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDSQRPGAHLTVK [R].eDSQRPGAHLTVk.[K] N-Term(TMT6plex); K13(TMT6plex) 7 Q3UK83 Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1 Q3TFB1; Q3UK83; P49312; Q3U7F3; P49312-2; Q3TIK8; Q5EBP8 Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=2; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Isoform Short of Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=1 0 4 4 0.6054 0 1 1 1 474.77362 1896.07265 1896.07033 1.22 0.00058 0/0 0 0 43632028 HCD 30 MS2 21.64326 862.7 30.945 56.1608 15821 15821 15818 QEplus033719.raw F4 967.8 844.5 722.7 818.9 1310.1 512.2 428 3.7 1 FALSE 1.14E-05 0.0001374 0.831 -250 69665 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLCCATVGR [K].tLccATVGR.[A] N-Term(TMT6plex); C3(Carbamidomethyl); C4(Carbamidomethyl) 3 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q60784 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Fibrillin-1 (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1 0 2 2 0.5633 0 1 1 1 633.82953 1266.65178 1266.64959 1.73 0.00109 0/0 0 0 33660996 HCD 30 MS2 45.84605 1057.8 44.847 56.1631 15822 15822 15818 QEplus033719.raw F4 1101.7 810.3 1143.5 1095.5 1060.5 1135.1 196 2.45 1 FALSE 1.14E-05 0.000591 0.708 -250 69680 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNLADCLR [R].rNLADcLR.[S] N-Term(TMT6plex); C6(Carbamidomethyl) 2 Q9R1P3 Proteasome subunit beta type-2 OS=Mus musculus OX=10090 GN=Psmb2 PE=1 SV=1 Q9R1P3; Q8BJX0 Proteasome subunit beta type-2 OS=Mus musculus OX=10090 GN=Psmb2 PE=1 SV=1; Proteasome subunit beta OS=Mus musculus OX=10090 GN=Psmb2 PE=2 SV=1 1 3 3 0.5347 0 1 1 1 416.23483 1246.68995 1246.68876 0.95 0.0004 0/0 0 0 17311844 HCD 30 MS2 47.19316 645.7 46.625 56.1698 15825 15825 15818 QEplus033719.raw F4 652.4 541.2 753.6 486.5 703.8 736.8 299 3.46 1 FALSE 1.14E-05 0.0009029 0.671 -250 69688 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECAEEPVGK [K].ecAEEPVGk.[G] N-Term(TMT6plex); C2(Carbamidomethyl); K9(TMT6plex) 3 F8WHM5 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 F8WHM5; Q61543; E9PWD8 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 0 3 3 0.5128 0 1 1 1 492.93076 1476.77771 1476.77685 0.58 0.00029 0/0 0 0 16853012 HCD 30 MS2 53.98843 1247.5 91.983 56.1721 15826 15826 15818 QEplus033719.raw F4 1374 1055.8 1370.8 1057.3 1301.1 1326.1 264 2.73 1 FALSE 0.001185 0.01613 0.319 -250 69693 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQLEQEK [K].eQLEQEk.[Q] N-Term(TMT6plex); K7(TMT6plex) 6 A0JNY7 "Eukaryotic translation initiation factor 4, gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=2 SV=1" A0JNY7; Q62448; Q62448-2; F7CBP1; F6UU81; G3XA17 "Eukaryotic translation initiation factor 4, gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=1 SV=2; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2; Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 2 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g2 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=1 SV=1" 0 2 2 0.322 0 1 1 1 681.39008 1361.77287 1361.76767 3.82 0.0026 0/0 0 0 15565429 HCD 30 MS2 27.0833 925.5 94.814 56.1744 15827 15827 15818 QEplus033719.raw F4 885.9 833 821.1 974.3 1147.8 890.6 499 2.36 1 FALSE 0.0006216 0.009169 0.418 -250 69709 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FHEGMK [R].fHEGMk.[S] N-Term(TMT6plex); K6(TMT6plex) 1 Q9R000 Integrin beta-1-binding protein 2 OS=Mus musculus OX=10090 GN=Itgb1bp2 PE=1 SV=1 Q9R000 Integrin beta-1-binding protein 2 OS=Mus musculus OX=10090 GN=Itgb1bp2 PE=1 SV=1 0 3 3 0.4492 0 1 1 1 402.89539 1206.6716 1206.67054 0.89 0.00036 0/0 0 0 6644504 HCD 30 MS2 36.57963 709.6 110 56.1864 15831 15831 15829 QEplus033719.raw F4 755.7 399 853.3 680.7 513.9 1054.8 374 3.54 1 FALSE 4.43E-05 0.001424 0.63 -250 69722 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTSSFGK [K].gTSSFGk.[R] N-Term(TMT6plex); K7(TMT6plex) 1 Q9D823 60S ribosomal protein L37 OS=Mus musculus OX=10090 GN=Rpl37 PE=1 SV=3 Q9D823 60S ribosomal protein L37 OS=Mus musculus OX=10090 GN=Rpl37 PE=1 SV=3 0 2 2 0.4803 0 1 1 1 571.33527 1141.66326 1141.66174 1.32 0.00076 0/0 0 0 42820740 HCD 30 MS2 6.91937 1461 44.408 56.1932 15834 15834 15829 QEplus033719.raw F4 1835.6 1158.6 1604 1281.2 1572.8 1313.6 187 2.54 1 FALSE 0.001117 0.01476 0.336 -250 69730 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AADEVAEGK [K].aADEVAEGk.[L] N-Term(TMT6plex); K9(TMT6plex) 2 P97807 "Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh PE=1 SV=3" P97807; P97807-2 "Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh PE=1 SV=3; Isoform Cytoplasmic of Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh" 0 2 2 0.5847 0 1 1 1 674.38 1347.75273 1347.75202 0.53 0.00036 0/0 0 0 40316188 HCD 30 MS2 8.419068 1045.8 53.791 56.1955 15835 15835 15829 QEplus033719.raw F4 1198.2 763.5 988.8 1049.3 1223.4 1051.3 425 3.66 1 FALSE 1.14E-05 1.84E-06 1.187 -250 69738 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSGGPSLEQR [K].vSGGPSLEQR.[F] N-Term(TMT6plex) 1 Q8QZY1 Eukaryotic translation initiation factor 3 subunit L OS=Mus musculus OX=10090 GN=Eif3l PE=1 SV=1 Q8QZY1 Eukaryotic translation initiation factor 3 subunit L OS=Mus musculus OX=10090 GN=Eif3l PE=1 SV=1 0 2 2 0.4949 0 1 1 1 629.85229 1258.69731 1258.69528 1.62 0.00102 0/0 0 0 27241398 HCD 30 MS2 30.91119 998.6 73.582 56.1977 15836 15836 15829 QEplus033719.raw F4 1017.2 835.2 1084.9 872.2 1089 1093.3 330 2.93 1 FALSE 1.14E-05 0.0002695 0.774 -250 69745 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAGITEK [R].eAGITEk.[V] N-Term(TMT6plex); K7(TMT6plex) 3 P17751 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5 H7BXC3; P17751; P17751-2 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=1; Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5; Isoform 2 of Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 0 2 2 0.1859 0 1 1 1 603.36011 1205.71294 1205.71417 -1.02 -0.00062 0/0 0 0 26492764 HCD 30 MS2 43.25697 1390.5 34.707 56.2 15837 15837 15829 QEplus033719.raw F4 1568.2 1015.5 1183.2 1591.1 1547.7 1437.4 320 2.69 1 FALSE 0.001101 0.0143 0.341 -250 69754 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDCQECPEGYR [K].mDcQEcPEGYR.[V] N-Term(TMT6plex); C3(Carbamidomethyl); C6(Carbamidomethyl) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; Q4FZG4; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Flna protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.89 0 1 1 1 558.56921 1673.69309 1673.69193 0.69 0.00039 0/0 0 0 20576090 HCD 30 MS2 33.51257 606.4 73.96 56.2045 15839 15839 15829 QEplus033719.raw F4 645.3 490.6 601.8 517.8 809.7 573.5 4 4.18 1 FALSE 1.14E-05 0.0001251 0.838 -250 69774 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLTVQTK [K].rLTVQTk.[F] N-Term(TMT6plex); K7(TMT6plex) 4 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q62261; A0A0A0MQG2; P70435; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; Brain beta-spectrin (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 1 3 3 0.3944 0 1 1 1 435.28876 1303.85172 1303.84619 4.24 0.00184 0/0 0 0 41679040 HCD 30 MS2 44.1583 646.6 14.714 56.2164 15843 15843 15840 QEplus033719.raw F4 643.6 493 746.2 598.9 663.3 734.7 103 2.84 2 FALSE 0.00403 0.07457 0.076 -250 69784 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CMMAQYNR [R].cMMAQYNR.[H] N-Term(TMT6plex); C1(Carbamidomethyl) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 2 2 0.547 0 1 1 1 651.8017 1302.59612 1302.59545 0.51 0.00033 0/0 0 0 30700740 HCD 30 MS2 38.162 991 50.065 56.2187 15844 15844 15840 QEplus033719.raw F4 1045.3 820.1 1099.3 856.7 1085.2 1039.5 13 2.87 1 FALSE 0.001972 0.03405 0.198 -250 69807 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLQEQADAAEER [R].sLQEQADAAEER.[A] N-Term(TMT6plex) 7 E9Q456; G5E8R2; G5E8R1 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 E9Q456; E9Q455; G5E8R2; E9Q453; G5E8R1; S4R261; G5E8R0 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 0 2 2 0.7096 0 1 1 1 788.39166 1575.77605 1575.78119 -3.27 -0.00257 0/0 0 0 11105068 HCD 30 MS2 11.79959 362.1 110 56.2257 15847 15847 15840 QEplus033719.raw F4 334.8 379.8 439.6 255.3 416.6 346.3 128 4.27 3 FALSE 1.14E-05 1.31E-10 1.975 -250 69813 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGPPGPAGQDGRPGPAGPPGAR [K].tGPPGPAGQDGRPGPAGPPGAR.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 3 3 0.7264 0 1 1 1 732.72247 2196.15287 2196.14713 2.61 0.00191 0/0 0 0 5861104 HCD 30 MS2 0 190.5 110 56.2282 15848 15848 15840 QEplus033719.raw F4 181.3 183.5 230.3 90.7 242.2 215 372 5.19 1 FALSE 1.14E-05 7.69E-15 2.778 -250 69821 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQPGPCRDEIAK [R].sQPGPcRDEIAk.[V] N-Term(TMT6plex); C6(Carbamidomethyl); K12(TMT6plex) 6 O08715 "A-kinase anchor protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Akap1 PE=1 SV=4" O08715; O08715-3; O08715-6; O08715-5; O08715-4; O08715-2 "A-kinase anchor protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Akap1 PE=1 SV=4; Isoform 2 of A-kinase anchor protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Akap1; Isoform 6 of A-kinase anchor protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Akap1; Isoform 5 of A-kinase anchor protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Akap1; Isoform 4 of A-kinase anchor protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Akap1; Isoform 1 of A-kinase anchor protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Akap1" 1 3 3 0.5265 0 1 1 1 605.99872 1815.9816 1815.97874 1.58 0.00095 0/0 0 0 8400586 HCD 30 MS2 31.3369 547.1 110 56.2307 15849 15849 15840 QEplus033719.raw F4 555.9 390.1 578.7 568.9 512.5 676.7 424 3.21 1 FALSE 1.14E-05 1.15E-05 1.036 -250 69840 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QASEGPLK [K].qASEGPLk.[G] N-Term(TMT6plex); K8(TMT6plex) 10 V9GX06; A0A0A0MQF6 Predicted gene 11214 (Fragment) OS=Mus musculus OX=10090 GN=Gm11214 PE=1 SV=1;Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 A0A1D5RLD8; V9GX06; A0A0A0MQF6; V9GXK0; W8QM43; P16858; S4R1W1; Q3TUZ9; Q4VBD1; S4R257 Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm10358 PE=1 SV=1; Predicted gene 11214 (Fragment) OS=Mus musculus OX=10090 GN=Gm11214 PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Predicted gene 12117 OS=Mus musculus OX=10090 GN=Gm12117 PE=3 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=2 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=2; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm3839 PE=1 SV=1; Gp_dh_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gm10481 PE=2 SV=1; Gapdh protein OS=Mus musculus OX=10090 GN=Gapdh PE=2 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 0 2 2 0.6088 0 1 1 1 644.388 1287.76872 1287.76727 1.13 0.00073 0/0 0 0 703189440 HCD 30 MS2 9.345892 785.6 2.579 56.2405 15852 15852 15851 QEplus033719.raw F4 790 517.6 776.4 928.6 709.6 991.4 409 2.94 2 FALSE 5.44E-05 0.001863 0.605 -250 69848 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAVPPGADK [R].sAVPPGADk.[K] N-Term(TMT6plex); K9(TMT6plex) 3 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" P63325; A0A338P7K4; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 0 2 2 0.4307 0 1 1 1 650.38776 1299.76824 1299.76727 0.74 0.00048 0/0 0 0 29432524 HCD 30 MS2 3.416822 751.6 59.051 56.2428 15853 15853 15851 QEplus033719.raw F4 758.6 627.2 807.6 592.3 873.8 850 350 2.67 2 FALSE 1.14E-05 0.0006186 0.704 -250 69858 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGAGLGHGMDR [R].mGAGLGHGMDR.[V] N-Term(TMT6plex) 10 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; Q9D0E1-2; Q3TQ66; Q3TL61; F6W322; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 3 3 0.7453 0 1 1 1 444.22406 1330.65763 1330.65574 1.42 0.00063 0/0 0 0 53630500 HCD 30 MS2 54.091 476.8 18.773 56.2451 15854 15854 15851 QEplus033719.raw F4 489.9 425.7 525.8 391.3 499.9 527.9 99 4.28 1 FALSE 1.14E-05 8.82E-07 1.248 -250 69864 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QMQVLHPAAR [K].qMQVLHPAAR.[M] N-Term(TMT6plex) 4 P80315 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3 G3UYW5; P80315; Q3TII0; Q3UJZ8 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1 0 3 3 0.7479 0 1 1 1 460.59769 1379.77851 1379.7779 0.44 0.0002 0/0 0 0 48136740 HCD 30 MS2 48.60738 735.8 33.313 56.2473 15855 15855 15851 QEplus033719.raw F4 736.6 571.4 823.6 669.2 738.4 875.6 366 3.57 1 FALSE 1.14E-05 1.52E-06 1.203 -250 69872 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVGEHVVSVR [K].eVGEHVVSVR.[K] N-Term(TMT6plex) 3 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q3UXJ8; Q8VHX6-2; Q8VHX6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flnc PE=2 SV=1; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 3 3 0.591 0 1 1 1 447.25592 1339.75321 1339.75313 0.06 0.00003 0/0 0 0 23403290 HCD 30 MS2 44.50317 737.6 48.453 56.2496 15856 15856 15851 QEplus033719.raw F4 774.5 537.6 831.3 675.8 731.5 874.7 343 4.45 1 FALSE 1.14E-05 2.81E-07 1.342 -250 69879 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPSWQRPNQAAPSTGR [K].sPSWQRPNQAAPSTGR.[I] N-Term(TMT6plex) 8 Q8CI51 PDZ and LIM domain protein 5 OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=4 D9J301; A0A0G2JGZ5; D9J2Z9; D9J302; A0A0G2JEJ0; D9J300; Q8CI51; Q2Q7P0 ENH isoform 1d OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=1; PDZ and LIM domain protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=1; ENH isoform 1b OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=1; ENH isoform 1e OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=1; PDZ and LIM domain protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=1; ENH isoform 1c OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=1; PDZ and LIM domain protein 5 OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=4; ENH1 OS=Mus musculus OX=10090 GN=Pdlim5 PE=2 SV=1 0 3 3 0.6359 0 1 1 1 657.01263 1969.02335 1969.02014 1.63 0.00107 0/0 0 0 12001795 HCD 30 MS2 5.318316 545.7 110 56.2521 15857 15857 15851 QEplus033719.raw F4 546.7 521.9 585.3 403.8 701.8 514.9 306 3.79 1 FALSE 1.14E-05 5.79E-13 2.422 -250 69915 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYDEDLGR [R].kYDEDLGR.[V] N-Term(TMT6plex); K1(TMT6plex) 1 Q8K1N4 Spermatogenesis-associated serine-rich protein 2 OS=Mus musculus OX=10090 GN=Spats2 PE=1 SV=1 Q8K1N4 Spermatogenesis-associated serine-rich protein 2 OS=Mus musculus OX=10090 GN=Spats2 PE=1 SV=1 1 3 3 0.2755 0 1 1 1 485.27243 1453.80274 1453.80511 -1.63 -0.00079 0/0 0 0 7261393 HCD 30 MS2 85.01595 1348.2 78.188 56.2614 15861 15861 15851 QEplus033719.raw F4 1367.4 1081.3 1596.6 1093.4 1399.4 1551.1 325 1.96 1 FALSE 0.002526 0.04954 0.143 -250 69977 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQHSLLK [R].kQHSLLk.[R] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 4 P62843 40S ribosomal protein S15 OS=Mus musculus OX=10090 GN=Rps15 PE=1 SV=2 P62843; Q3UXS6; Q3UK70; D3YTQ9 40S ribosomal protein S15 OS=Mus musculus OX=10090 GN=Rps15 PE=1 SV=2; 40S ribosomal protein S15 OS=Mus musculus OX=10090 GN=Rps15 PE=2 SV=1; 40S ribosomal protein S15 OS=Mus musculus OX=10090 GN=Rps15 PE=2 SV=1; 40S ribosomal protein S15 OS=Mus musculus OX=10090 GN=Rps15 PE=1 SV=1 1 3 3 0.2864 0 1 1 1 514.34357 1541.01615 1541.01421 1.26 0.00065 0/0 0 0 14577549 HCD 30 MS2 52.11786 1312 76.797 56.2848 15870 15870 15862 QEplus033719.raw F4 1739.2 1049.2 1321.8 1259.1 1483.4 1019.5 87 2.2 1 FALSE 0.0006383 0.009724 0.409 -250 69983 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSSGWSSSK [K].dSSGWSSSk.[D] N-Term(TMT6plex); K9(TMT6plex) 3 B9EKE9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1 B9EKE9; B7ZWF1; Q3TQX5 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=1 0 2 2 0.6845 0 1 1 1 699.86652 1398.72576 1398.72653 -0.55 -0.00039 0/0 0 0 13686204 HCD 30 MS2 10.41779 878.8 110 56.2873 15871 15871 15862 QEplus033719.raw F4 933 890.1 902.2 624.1 1120.4 803.1 208 3.93 1 FALSE 1.14E-05 1.75E-06 1.191 -250 69997 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ACSLAK [K].acSLAk.[T] N-Term(TMT6plex); C2(Carbamidomethyl); K6(TMT6plex) 4 Q9CQV8; P63101 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3;14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 Q9CQV8-2; Q9CQV8; Q3UA58; P63101 Isoform Short of 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab; 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3; 14_3_3 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=2 SV=1; 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 0 3 3 0.3465 0 1 1 1 369.89178 1107.6608 1107.65964 1.05 0.00039 0/0 0 0 4364451 HCD 30 MS2 60.93181 474.8 110 56.2971 15874 15874 15873 QEplus033719.raw F4 520.9 369.4 541.3 428.8 484.9 503.5 117 2.02 2 FALSE 0.007451 0.1211 -0.044 -250 70012 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQVIYTR [R].aQVIYTR.[N] N-Term(TMT6plex) 2 P62852 40S ribosomal protein S25 OS=Mus musculus OX=10090 GN=Rps25 PE=1 SV=1 A0A1L1SQA8; P62852 40S ribosomal protein S25 OS=Mus musculus OX=10090 GN=Rps25 PE=1 SV=1; 40S ribosomal protein S25 OS=Mus musculus OX=10090 GN=Rps25 PE=1 SV=1 0 2 2 0.3962 0 1 1 1 540.32489 1079.6425 1079.64106 1.34 0.00072 0/0 0 0 110452784 HCD 30 MS2 4.635133 656.9 11.11 56.3019 15876 15876 15873 QEplus033719.raw F4 564.1 611.5 806 519.3 649.7 791.1 98 2.6 1 FALSE 0.001266 0.01729 0.307 -250 70031 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSATGLSK [K].dSATGLSk.[G] N-Term(TMT6plex); K8(TMT6plex) 5 P26369 Splicing factor U2AF 65 kDa subunit OS=Mus musculus OX=10090 GN=U2af2 PE=1 SV=3 P26369; Q505Q1; Q80XR5; Q922I0; Q3KQM4 Splicing factor U2AF 65 kDa subunit OS=Mus musculus OX=10090 GN=U2af2 PE=1 SV=3; U2 snRNP auxiliary factor large subunit (Fragment) OS=Mus musculus OX=10090 GN=U2af2 PE=2 SV=1; U2 snRNP auxiliary factor large subunit OS=Mus musculus OX=10090 GN=U2af2 PE=1 SV=1; U2 snRNP auxiliary factor large subunit OS=Mus musculus OX=10090 GN=U2af2 PE=2 SV=1; U2 snRNP auxiliary factor large subunit OS=Mus musculus OX=10090 GN=U2af2 PE=1 SV=1 0 2 2 0.4448 0 1 1 1 618.8642 1236.72112 1236.71999 0.91 0.00056 0/0 0 0 27735008 HCD 30 MS2 12.97084 1535.4 110 56.3066 15878 15878 15873 QEplus033719.raw F4 1761.5 1429.2 1512.1 1111.1 2146.9 1251.4 360 2.81 1 FALSE 1.14E-05 0.0003085 0.763 -250 70035 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQQEDFK [K].eQQEDFk.[E] N-Term(TMT6plex); K7(TMT6plex) 2 Q545T7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Myl1 PE=2 SV=1 E0CZ30; Q545T7 "Myosin light chain 1/3, skeletal muscle isoform (Fragment) OS=Mus musculus OX=10090 GN=Myl1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myl1 PE=2 SV=1" 0 2 2 0.5779 0 1 1 1 691.37134 1381.7354 1381.73637 -0.7 -0.00048 0/0 0 0 23116462 HCD 30 MS2 27.43689 1648.3 110 56.3092 15879 15879 15873 QEplus033719.raw F4 2207.9 243.2 1079.7 3385.6 305.4 2668.2 253 2.89 1 FALSE 0.0009075 0.01248 0.366 -250 70056 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAGITEK [R].eAGITEk.[V] N-Term(TMT6plex); K7(TMT6plex) 3 P17751 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5 H7BXC3; P17751; P17751-2 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=1; Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5; Isoform 2 of Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 0 3 3 0.083 0 1 1 1 402.57635 1205.71451 1205.71417 0.28 0.00011 0/0 0 0 12220128 HCD 30 MS2 31.9824 665.9 75.713 56.3162 15882 15882 15873 QEplus033719.raw F4 741.4 432.8 629.4 771.5 661.5 758.9 474 2.29 1 FALSE 0.004122 0.07569 0.073 -250 70072 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QASEGPLK [K].qASEGPLk.[G] N-Term(TMT6plex); K8(TMT6plex) 10 V9GX06; A0A0A0MQF6 Predicted gene 11214 (Fragment) OS=Mus musculus OX=10090 GN=Gm11214 PE=1 SV=1;Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 A0A1D5RLD8; V9GX06; A0A0A0MQF6; V9GXK0; W8QM43; P16858; S4R1W1; Q3TUZ9; Q4VBD1; S4R257 Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm10358 PE=1 SV=1; Predicted gene 11214 (Fragment) OS=Mus musculus OX=10090 GN=Gm11214 PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Predicted gene 12117 OS=Mus musculus OX=10090 GN=Gm12117 PE=3 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=2 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=2; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm3839 PE=1 SV=1; Gp_dh_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gm10481 PE=2 SV=1; Gapdh protein OS=Mus musculus OX=10090 GN=Gapdh PE=2 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 0 3 3 0.497 0 1 1 1 429.92767 1287.76847 1287.76727 0.93 0.0004 0/0 0 0 46508940 HCD 30 MS2 26.64487 439.7 21.706 56.3259 15885 15885 15884 QEplus033719.raw F4 479.3 332.3 446.9 450 426.9 503.1 427 3.3 2 FALSE 0.0004888 0.007787 0.443 -250 70079 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGTMNSYEMR [R].sGTMNSYEMR.[K] N-Term(TMT6plex) 3 O08529 Calpain-2 catalytic subunit OS=Mus musculus OX=10090 GN=Capn2 PE=1 SV=4 Q3U3A8; O08529; Q3U8S5 Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1; Calpain-2 catalytic subunit OS=Mus musculus OX=10090 GN=Capn2 PE=1 SV=4; Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1 0 2 2 0.8319 0 1 1 1 702.82532 1404.64336 1404.6449 -1.1 -0.00077 0/0 0 0 18212528 HCD 30 MS2 7.481399 738 110 56.3285 15886 15886 15884 QEplus033719.raw F4 734.6 680 806.5 627.4 870.8 708.4 34 3.39 1 FALSE 1.14E-05 6.23E-07 1.276 -250 70084 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSTPEEVKK [K].sSTPEEVkk.[R] N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex) 4 P18760 Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3 Q9CX22; A0A494B9A7; P18760; F8WGL3 "Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=2 SV=1; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1; Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1" 1 3 3 0.6084 0 1 1 1 564.67694 1692.01627 1692.01466 0.95 0.00054 0/0 0 0 300993920 HCD 30 MS2 10.85403 1188.1 6.133 56.3307 15887 15887 15884 QEplus033719.raw F4 1298.7 1133.2 1126 822.4 1920.5 828.1 375 2.86 1 FALSE 0.0002719 0.005529 0.489 -250 70092 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVSDDLTER [R].qVSDDLTER.[A] N-Term(TMT6plex) 4 P67778 Prohibitin OS=Mus musculus OX=10090 GN=Phb PE=1 SV=1 Q3TV00; P67778; Q5SQG5; Q3V2K0 Prohibitin (Fragment) OS=Mus musculus OX=10090 GN=Phb PE=2 SV=1; Prohibitin OS=Mus musculus OX=10090 GN=Phb PE=1 SV=1; Prohibitin (Fragment) OS=Mus musculus OX=10090 GN=Phb PE=1 SV=1; Prohibitin OS=Mus musculus OX=10090 GN=1700071K01Rik PE=2 SV=1 0 2 2 0.4475 0 1 1 1 646.33862 1291.66997 1291.66913 0.65 0.00042 0/0 0 0 59088100 HCD 30 MS2 16.54348 809.1 29.213 56.333 15888 15888 15884 QEplus033719.raw F4 833.7 636.1 916.5 846.7 689.5 932.2 232 3.24 1 FALSE 1.14E-05 5.98E-06 1.09 -250 70101 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECWEQEHEEREAEK [K].ecWEQEHEEREAEk.[V] N-Term(TMT6plex); C2(Carbamidomethyl); K14(TMT6plex) 4 F6QC77 "Troponin I, slow skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1" F6QC77; Q9WUZ5; D3YTL4; D3YUN3 "Troponin I, slow skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1; Troponin I, slow skeletal muscle OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=3; Troponin I, slow skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1; Troponin I, slow skeletal muscle OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1" 1 4 4 0.6453 0 1 1 1 587.53082 2347.10146 2347.10249 -0.44 -0.00026 0/0 0 0 43380252 HCD 30 MS2 14.58449 1092.6 99.138 56.3353 15889 15889 15884 QEplus033719.raw F4 1188.4 396.3 1480 1129 429.1 1932.7 110 5.47 1 FALSE 1.14E-05 6.44E-09 1.653 -250 70118 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAEEVEAK [K].aAEEVEAk.[F] N-Term(TMT6plex); K8(TMT6plex) 5 Q9D9P1 MICOS complex subunit Mic19 OS=Mus musculus OX=10090 GN=Chchd3 PE=1 SV=1 Q9D9P1; Q91VG6; Q9CRB9; D3Z0L4; F6QFL0 MICOS complex subunit Mic19 OS=Mus musculus OX=10090 GN=Chchd3 PE=1 SV=1; Chchd3 protein (Fragment) OS=Mus musculus OX=10090 GN=Chchd3 PE=2 SV=1; MICOS complex subunit Mic19 OS=Mus musculus OX=10090 GN=Chchd3 PE=1 SV=1; MICOS complex subunit Mic19 (Fragment) OS=Mus musculus OX=10090 GN=Chchd3 PE=1 SV=1; MICOS complex subunit Mic19 (Fragment) OS=Mus musculus OX=10090 GN=Chchd3 PE=1 SV=1 0 2 2 0.3584 0 1 1 1 652.87622 1304.74516 1304.7462 -0.8 -0.00052 0/0 0 0 25034212 HCD 30 MS2 51.43693 1320 61.605 56.3421 15892 15892 15884 QEplus033719.raw F4 1357.5 986.2 1402.9 1326.5 1426.4 1420.4 425 3.46 1 FALSE 1.14E-05 6.91E-05 0.888 -250 70136 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CPSMGAEK [K].cPSMGAEk.[V] N-Term(TMT6plex); C1(Carbamidomethyl); K8(TMT6plex) 1 O70310 Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 O70310 Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 0 2 2 0.3785 0 1 1 1 669.3537 1337.70012 1337.69576 3.26 0.00218 0/0 0 0 51623552 HCD 30 MS2 16.87281 889.5 38.555 56.3584 15898 15898 15895 QEplus033719.raw F4 862.6 854.4 928.4 714 1095.7 881.9 238 1.77 1 FALSE 0.002148 0.04012 0.174 -250 70144 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FDDGAGGDNEVQR [R].fDDGAGGDNEVQR.[T] N-Term(TMT6plex) 4 Q8BVQ9 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=1 SV=1 Q3UIH5; Q3U5V3; Q8BVQ9; P46471 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=1 SV=1; 26S proteasome regulatory subunit 7 OS=Mus musculus OX=10090 GN=Psmc2 PE=1 SV=5 0 2 2 0.6467 0 1 1 1 804.87665 1608.74602 1608.74514 0.54 0.00044 0/0 0 0 20961046 HCD 30 MS2 0 520.1 110 56.3609 15899 15899 15895 QEplus033719.raw F4 529.1 400.8 565.8 510.9 482.5 631.8 49 4.33 1 FALSE 1.14E-05 6.31E-12 2.225 -250 70158 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVCTVVAR [K].eVcTVVAR.[R] N-Term(TMT6plex); C3(Carbamidomethyl) 2 O08528 Hexokinase-2 OS=Mus musculus OX=10090 GN=Hk2 PE=1 SV=1 O08528; E9Q5B5 Hexokinase-2 OS=Mus musculus OX=10090 GN=Hk2 PE=1 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk2 PE=1 SV=1 0 2 2 0.505 0 1 1 1 581.82648 1162.64568 1162.64516 0.45 0.00026 0/0 0 0 13556065 HCD 30 MS2 39.42557 1278.1 110 56.3657 15901 15901 15895 QEplus033719.raw F4 1526.8 928.4 1301.1 1410.2 1218.2 1283.9 343 3.03 1 FALSE 1.14E-05 0.0005624 0.712 -250 70164 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEPGSPGENGAPGQMGPR [K].gEPGSPGENGAPGQMGPR.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 3 3 0.7737 0 1 1 1 641.9776 1923.91825 1923.91804 0.11 0.00007 0/0 0 0 13525930 HCD 30 MS2 5.58933 270.5 110 56.3682 15902 15902 15895 QEplus033719.raw F4 249.4 253.5 312.3 200.3 312.3 295.3 115 6.23 1 FALSE 1.14E-05 6.53E-10 1.842 -250 70171 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LFPHCGR [K].lFPHcGR.[L] N-Term(TMT6plex); C5(Carbamidomethyl) 2 P51863 V-type proton ATPase subunit d 1 OS=Mus musculus OX=10090 GN=Atp6v0d1 PE=1 SV=2 Q921S5; P51863 V-type proton ATPase subunit OS=Mus musculus OX=10090 GN=Atp6v0d1 PE=2 SV=1; V-type proton ATPase subunit d 1 OS=Mus musculus OX=10090 GN=Atp6v0d1 PE=1 SV=2 0 3 3 0.6622 0 1 1 1 372.53772 1115.59861 1115.59815 0.41 0.00015 0/0 0 0 12440559 HCD 30 MS2 51.03188 380.3 110 56.3707 15903 15903 15895 QEplus033719.raw F4 385.7 298.7 452.3 359.2 354.7 431.2 139 2.96 1 FALSE 0.0001401 0.003193 0.552 -250 70180 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVNDLTSQR [R].sVNDLTSQR.[A] N-Term(TMT6plex) 2 B2RY26 Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1 B2RY26; B2RXX9 "Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1" 0 2 2 0.5737 0 1 1 1 624.84137 1248.67546 1248.67454 0.73 0.00046 0/0 0 0 11874869 HCD 30 MS2 24.93831 884.9 110 56.3732 15904 15904 15895 QEplus033719.raw F4 1167 443.7 660.4 1469.4 609.9 958.8 320 3.19 1 FALSE 1.14E-05 8.08E-06 1.065 -250 70189 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVTAEVQPQCGR [K].tVTAEVQPQcGR.[A] N-Term(TMT6plex); C10(Carbamidomethyl) 4 Q3V1T4 Prolyl 3-hydroxylase 1 OS=Mus musculus OX=10090 GN=P3h1 PE=1 SV=2 Q3V1T4; A2A7Q5; A6PW84; Q3V1T4-3 Prolyl 3-hydroxylase 1 OS=Mus musculus OX=10090 GN=P3h1 PE=1 SV=2; Procollagen-proline 3-dioxygenase OS=Mus musculus OX=10090 GN=P3h1 PE=1 SV=1; Procollagen-proline 3-dioxygenase OS=Mus musculus OX=10090 GN=P3h1 PE=1 SV=1; Isoform 3 of Prolyl 3-hydroxylase 1 OS=Mus musculus OX=10090 GN=P3h1 0 2 2 0.6472 0 1 1 1 787.91199 1574.8167 1574.81581 0.57 0.00045 0/0 0 0 11392371 HCD 30 MS2 5.914834 284.8 110 56.3758 15905 15905 15895 QEplus033719.raw F4 265.7 249.3 331.6 245 325.4 291.8 220 3.77 1 FALSE 1.14E-05 3.70E-08 1.509 -250 70197 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSTPEEVKK [K].sSTPEEVkk.[R] N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex) 4 P18760 Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3 Q9CX22; A0A494B9A7; P18760; F8WGL3 "Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=2 SV=1; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1; Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1" 1 2 2 0.6694 0 1 1 1 846.5119 1692.01653 1692.01466 1.1 0.00093 0/0 0 0 11708922 HCD 30 MS2 0 472.2 110 56.3831 15907 15907 15906 QEplus033719.raw F4 508.4 430.5 453.4 337.5 744.1 359.1 394 3.6 1 FALSE 5.44E-05 0.002119 0.593 -250 70203 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FDDGAGGDNEVQR [R].fDDGAGGDNEVQR.[T] N-Term(TMT6plex) 4 Q8BVQ9 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=1 SV=1 Q3UIH5; Q3U5V3; Q8BVQ9; P46471 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=1 SV=1; 26S proteasome regulatory subunit 7 OS=Mus musculus OX=10090 GN=Psmc2 PE=1 SV=5 0 3 3 0.6064 0 1 1 1 536.92023 1608.74613 1608.74514 0.61 0.00033 0/0 0 0 13311325 HCD 30 MS2 33.61957 744.6 101.188 56.3855 15908 15908 15906 QEplus033719.raw F4 841.8 560.3 837.6 776.6 707.5 744 49 4.7 1 FALSE 1.14E-05 4.08E-08 1.501 -250 70211 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQHEATAATQK [R].lQHEATAATQk.[R] N-Term(TMT6plex); K11(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.7444 0 1 1 1 552.65479 1655.9498 1655.94809 1.03 0.00057 0/0 0 0 96557536 HCD 30 MS2 4.918402 541.2 19.658 56.3877 15909 15909 15906 QEplus033719.raw F4 600 457.1 543.1 471.1 627.8 548.1 403 6.26 2 FALSE 1.14E-05 2.54E-11 2.11 -250 70224 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGAGSVFR [R].kGAGSVFR.[A] N-Term(TMT6plex); K1(TMT6plex) 3 P62918 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2 Q3UJS0; P62918; Q3THC7 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1 1 3 3 0.4728 0 1 1 1 427.26785 1279.78901 1279.78868 0.26 0.00011 0/0 0 0 26632324 HCD 30 MS2 16.81584 859.2 53.749 56.3922 15911 15911 15906 QEplus033719.raw F4 861.3 933.9 961 847.3 710.3 841.3 260 2.39 1 FALSE 0.0001603 0.003643 0.537 -250 70256 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTYEEGLK [K].rTYEEGLk.[H] N-Term(TMT6plex); K8(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 1 2 2 0.5513 0 1 1 1 727.42487 1453.84245 1453.8415 0.66 0.00048 0/0 0 0 8175769.5 HCD 30 MS2 0 448.1 110 56.4041 15916 15916 15906 QEplus033719.raw F4 445.9 356.1 528.7 354 519.7 484.1 291 2.34 1 FALSE 0.001632 0.0266 0.235 -250 70262 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AECLNPAQPGR [R].aEcLNPAQPGR.[R] N-Term(TMT6plex); C3(Carbamidomethyl) 1 P10493 Nidogen-1 OS=Mus musculus OX=10090 GN=Nid1 PE=1 SV=2 P10493 Nidogen-1 OS=Mus musculus OX=10090 GN=Nid1 PE=1 SV=2 0 2 2 0.5236 0 1 1 1 721.37427 1441.74126 1441.74191 -0.45 -0.00033 0/0 0 0 5938620 HCD 30 MS2 21.46216 472 110 56.4114 15918 15918 15917 QEplus033719.raw F4 477.3 415.4 566.9 432.9 475.1 464.1 205 4.03 1 FALSE 1.14E-05 4.23E-08 1.498 -250 70280 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQKPVVVKR [R].sQkPVVVkR.[K] N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex) 3 Q5M9N5 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1 Q5M9N5; F6Z0X0; Q5M9J8 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1; 60S ribosomal protein L28 (Fragment) OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1; 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1 1 4 4 0.6098 0 1 1 1 432.79236 1728.1476 1728.14629 0.76 0.00033 0/0 0 0 40056764 HCD 30 MS2 21.07915 992.3 38.017 56.4184 15921 15921 15917 QEplus033719.raw F4 957.2 964.6 1128.5 878 1114.1 911.4 48 2.64 1 FALSE 0.002801 0.05518 0.127 -250 70292 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDPHLACVAYER [K].rDPHLAcVAYER.[G] N-Term(TMT6plex); C7(Carbamidomethyl) 4 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 Q80U89; Q68FD5; Q5SXR6; Q3UPJ3 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1 1 4 4 0.7402 0 1 1 1 429.72702 1715.88625 1715.88489 0.79 0.00034 0/0 0 0 21634880 HCD 30 MS2 50.45324 341.6 42.11 56.4229 15923 15923 15917 QEplus033719.raw F4 421.3 254.5 353.1 311 315.8 393.8 234 4.35 1 FALSE 1.14E-05 6.33E-06 1.085 -250 70317 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YMASTAVGSR [K].yMASTAVGSR.[Q] N-Term(TMT6plex) 9 E9Q3Z5 Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1 Q99KQ8; E9Q3Z5; E3VVQ8; Q7TMJ2; Q8K4L2; Q8K4L3; Q8K4L3-3; Q3TTX5; A0A1B0GS91 Svil protein (Fragment) OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin muscle-specific isoform OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1; Svil protein (Fragment) OS=Mus musculus OX=10090 GN=Svil PE=2 SV=2; Archvillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Isoform 2 of Supervillin OS=Mus musculus OX=10090 GN=Svil; HP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1 0 2 2 0.6198 0 1 1 1 636.33649 1271.6657 1271.66154 3.27 0.00208 0/0 0 0 10809502 HCD 30 MS2 25.32918 775.8 110 56.43 15926 15926 15917 QEplus033719.raw F4 713.2 673.1 920.5 683.7 848.6 815.9 195 3.34 1 FALSE 1.14E-05 8.09E-05 0.875 -250 70324 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQHEATAATQK [R].lQHEATAATQk.[R] N-Term(TMT6plex); K11(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5885 0 1 1 1 828.47833 1655.94939 1655.94809 0.78 0.00065 0/0 0 0 10213997 HCD 30 MS2 0 451.2 110 56.4325 15927 15927 15917 QEplus033719.raw F4 483.3 379.1 480.4 388.2 512 464.1 404 4.86 2 FALSE 1.14E-05 4.11E-10 1.88 -250 70334 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLEETDESQLER [R].rLEETDESQLER.[L] N-Term(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 1 3 3 0.4325 0 1 1 1 578.63428 1733.88828 1733.88672 0.9 0.00052 0/0 0 0 16704054 HCD 30 MS2 8.681737 504.4 110 56.4398 15929 15929 15928 QEplus033719.raw F4 522.6 317.2 511.9 590.8 440.8 643.2 227 5.78 2 FALSE 1.14E-05 4.90E-13 2.436 -250 70339 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNYSEK [K].vNYSEk.[L] N-Term(TMT6plex); K6(TMT6plex) 5 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; Q62411; A0A571BF46; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 2 2 0.3264 0 1 1 1 599.34961 1197.69194 1197.68796 3.33 0.00199 0/0 0 0 5277108 HCD 30 MS2 20.02308 999.6 110 56.4423 15930 15930 15928 QEplus033719.raw F4 1092.4 561.4 1012.8 1308.8 721.1 1301.2 262 1.93 1 FALSE 0.008431 0.147 -0.083 -250 70389 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSVAVNESCGK [R].qSVAVNEScGk.[C] N-Term(TMT6plex); C9(Carbamidomethyl); K11(TMT6plex) 5 Q8CBM0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1 Q8CBM0; Q3TCR9; Q8CD55; Q62523; Q7TQE2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Zyxin OS=Mus musculus OX=10090 GN=Zyx PE=1 SV=2; Zyx protein OS=Mus musculus OX=10090 GN=Zyx PE=1 SV=1 0 2 2 0.796 0 1 1 1 818.94135 1636.87541 1636.87288 1.55 0.00127 0/0 0 0 28465350 HCD 30 MS2 6.788973 967.9 110 56.4586 15937 15937 15928 QEplus033719.raw F4 953.5 1170.9 1146.8 533 1161.8 841.5 351 4.46 1 FALSE 1.14E-05 9.58E-10 1.811 -250 70397 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLSEAGK [R].tLSEAGk.[S] N-Term(TMT6plex); K7(TMT6plex) 5 A0A1C7CYV0 Plastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1 Q3UKB1; A0A1C7CYV0; B1AX58; Q3UJG9; Q99K51 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pls3 PE=2 SV=1; Plastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1; Plastin-3 OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pls3 PE=2 SV=1; Plastin-3 OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=3 0 2 2 0.39 0 1 1 1 582.35577 1163.70427 1163.70361 0.57 0.00033 0/0 0 0 23731194 HCD 30 MS2 49.88843 1324.1 64.09 56.4609 15938 15938 15928 QEplus033719.raw F4 1679.6 1054.1 1467 1232.6 1310.5 1201.1 278 3 1 FALSE 0.0002019 0.004122 0.524 -250 70407 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTYEEGLK [K].rTYEEGLk.[H] N-Term(TMT6plex); K8(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 1 3 3 0.5668 0 1 1 1 485.28586 1453.84302 1453.8415 1.05 0.00051 0/0 0 0 140165856 HCD 30 MS2 19.74818 715.8 11.006 56.4682 15940 15940 15939 QEplus033719.raw F4 724.2 560.6 823.3 582.7 850.3 753.7 297 3.74 1 FALSE 1.14E-05 1.46E-05 1.016 -250 70418 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSVAVNESCGK [R].qSVAVNEScGk.[C] N-Term(TMT6plex); C9(Carbamidomethyl); K11(TMT6plex) 5 Q8CBM0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1 Q8CBM0; Q3TCR9; Q8CD55; Q62523; Q7TQE2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Zyxin OS=Mus musculus OX=10090 GN=Zyx PE=1 SV=2; Zyx protein OS=Mus musculus OX=10090 GN=Zyx PE=1 SV=1 0 3 3 0.7061 0 1 1 1 546.29688 1636.87607 1636.87288 1.95 0.00107 0/0 0 0 72203832 HCD 30 MS2 21.27395 700.1 25.083 56.473 15942 15942 15939 QEplus033719.raw F4 722.7 736.1 797.4 465 853.4 625.8 355 4.9 1 FALSE 1.14E-05 8.71E-09 1.629 -250 70423 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSATGLSK [K].dSATGLSk.[G] N-Term(TMT6plex); K8(TMT6plex) 5 P26369 Splicing factor U2AF 65 kDa subunit OS=Mus musculus OX=10090 GN=U2af2 PE=1 SV=3 P26369; Q505Q1; Q80XR5; Q922I0; Q3KQM4 Splicing factor U2AF 65 kDa subunit OS=Mus musculus OX=10090 GN=U2af2 PE=1 SV=3; U2 snRNP auxiliary factor large subunit (Fragment) OS=Mus musculus OX=10090 GN=U2af2 PE=2 SV=1; U2 snRNP auxiliary factor large subunit OS=Mus musculus OX=10090 GN=U2af2 PE=1 SV=1; U2 snRNP auxiliary factor large subunit OS=Mus musculus OX=10090 GN=U2af2 PE=2 SV=1; U2 snRNP auxiliary factor large subunit OS=Mus musculus OX=10090 GN=U2af2 PE=1 SV=1 0 2 2 0.0841 0 1 1 1 618.85907 1236.71086 1236.71999 -7.38 -0.00456 0/0 0 0 51070460 HCD 30 MS2 3.506268 1328.5 36.203 56.4752 15943 15943 15939 QEplus033719.raw F4 1484 1132.3 1354.2 1076.1 1801.4 1123.2 372 2.26 1 FALSE 0.0001603 0.003626 0.538 -250 70433 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLAQYHAK [R].qLAQYHAk.[D] N-Term(TMT6plex); K8(TMT6plex) 9 Q3TWL6 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1 Q3TI61; Q99JX8; Q3TWL6; Q3TW71; Q3U9Y8; Q3TIP0; Q8VDM4; Q3TXV1; Q80V77 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; Psmd2 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1 0 3 3 0.5509 0 1 1 1 472.95114 1416.83887 1416.83635 1.78 0.00084 0/0 0 0 29484690 HCD 30 MS2 18.79123 838.5 52.755 56.4775 15944 15944 15939 QEplus033719.raw F4 884.2 598.9 885.8 789 895.1 977.7 435 4.03 1 FALSE 1.14E-05 4.33E-07 1.306 -250 70442 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGQGAFGNMCR [R].sGQGAFGNMcR.[G] N-Term(TMT6plex); C10(Carbamidomethyl) 1 Q9D8E6 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3 Q9D8E6 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3 0 2 2 0.7646 0 1 1 1 707.33234 1413.6574 1413.65647 0.66 0.00046 0/0 0 0 21431246 HCD 30 MS2 0 933.4 110 56.48 15945 15945 15939 QEplus033719.raw F4 970.6 814.3 1047.5 727.5 1031.5 1009.1 51 4.29 1 FALSE 1.14E-05 1.67E-08 1.575 -250 70449 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CIDHYTK [K].cIDHYTk.[Q] N-Term(TMT6plex); C1(Carbamidomethyl); K7(TMT6plex) 6 Q3TXS7 26S proteasome non-ATPase regulatory subunit 1 OS=Mus musculus OX=10090 GN=Psmd1 PE=1 SV=1 Q05CG9; Q5HZG6; Q8BU34; Q8CGG2; Q3TXS7; Q8CGI9 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=2; 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 1 OS=Mus musculus OX=10090 GN=Psmd1 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=1 0 3 3 0.4628 0 1 1 1 465.5878 1394.74884 1394.75024 -1 -0.00047 0/0 0 0 13304852 HCD 30 MS2 54.7005 995.2 50.891 56.4823 15946 15946 15939 QEplus033719.raw F4 1345.1 843.5 1054 836.1 1027.7 864.9 330 2.42 1 FALSE 0.002352 0.04709 0.151 -250 70456 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EANQAINPK [R].eANQAINPk.[L] N-Term(TMT6plex); K9(TMT6plex) 7 Q5U222 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1 Q9CSD9; Q3UXW3; Q5U222; Q3V0Z8; A1L333; Q61656; Q8BTS0 Helicase C-terminal domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 0 2 2 0.5175 0 1 1 1 721.92377 1442.84026 1442.83675 2.43 0.00175 0/0 0 0 10328746 HCD 30 MS2 51.70003 875.4 110 56.4848 15947 15947 15939 QEplus033719.raw F4 899.7 874.3 975 650.4 1012.7 840 366 3.42 1 FALSE 1.14E-05 1.18E-06 1.223 -250 70497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELSDIAHR [K].eLSDIAHR.[I] N-Term(TMT6plex) 10 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 A0A0U1RPT5; Q9CPQ9; D3YWI1; A0A0U1RPN8; D3YV98; A6ZI46; D3Z510; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=2; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 0 3 3 0.4987 0 1 1 1 390.55438 1169.64859 1169.6476 0.85 0.00033 0/0 0 0 26559292 HCD 30 MS2 37.80883 496.1 51.516 56.5016 15953 15953 15950 QEplus033719.raw F4 706.9 293 455 551 494.8 476 214 3.95 1 FALSE 1.14E-05 9.70E-06 1.05 -250 70509 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRQEVNQNMN [K].lRQEVNQNMN.[-] N-Term(TMT6plex) 2 Q9CYG7 Mitochondrial import receptor subunit TOM34 OS=Mus musculus OX=10090 GN=Tomm34 PE=1 SV=1 Q9CYG7; Q9CYG7-2 Mitochondrial import receptor subunit TOM34 OS=Mus musculus OX=10090 GN=Tomm34 PE=1 SV=1; Isoform 2 of Mitochondrial import receptor subunit TOM34 OS=Mus musculus OX=10090 GN=Tomm34 1 2 2 0.6695 0 1 1 1 737.88611 1474.76494 1474.76338 1.06 0.00078 0/0 0 0 12853020 HCD 30 MS2 0 262.1 110 56.5064 15955 15955 15950 QEplus033719.raw F4 245.6 232.1 291.1 261.3 247.4 295 214 2.33 1 FALSE 0.001886 0.0318 0.208 -250 70528 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGEVGQSK [R].vGEVGQSk.[M] N-Term(TMT6plex); K8(TMT6plex) 5 Q3ULW8 Protein mono-ADP-ribosyltransferase PARP3 OS=Mus musculus OX=10090 GN=Parp3 PE=2 SV=1 Q3ULW8-2; A0A5H1ZRP0; Q3ULW8; A0A5H1ZRL8; A0A5H1ZRL5 Isoform 2 of Protein mono-ADP-ribosyltransferase PARP3 OS=Mus musculus OX=10090 GN=Parp3; Poly [ADP-ribose] polymerase (Fragment) OS=Mus musculus OX=10090 GN=Parp3 PE=1 SV=1; Protein mono-ADP-ribosyltransferase PARP3 OS=Mus musculus OX=10090 GN=Parp3 PE=2 SV=1; Protein mono-ADP-ribosyltransferase PARP3 (Fragment) OS=Mus musculus OX=10090 GN=Parp3 PE=1 SV=1; Protein mono-ADP-ribosyltransferase PARP3 (Fragment) OS=Mus musculus OX=10090 GN=Parp3 PE=1 SV=1 0 2 2 0.2567 0 1 1 1 631.38141 1261.75554 1261.75162 3.11 0.00196 0/0 0 0 10035209 HCD 30 MS2 31.99424 935.5 110 56.5114 15957 15957 15950 QEplus033719.raw F4 1033.1 644.1 986.2 976.5 916.3 1056.9 576 3 1 FALSE 1.14E-05 0.0001747 0.811 -250 70557 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDTELQEK [K].qDTELQEk.[E] N-Term(TMT6plex); K8(TMT6plex) 2 Q6A065 Centrosomal protein of 170 kDa OS=Mus musculus OX=10090 GN=Cep170 PE=1 SV=2 Q6A065; H7BX26 Centrosomal protein of 170 kDa OS=Mus musculus OX=10090 GN=Cep170 PE=1 SV=2; Centrosomal protein of 170 kDa OS=Mus musculus OX=10090 GN=Cep170 PE=1 SV=1 0 2 2 0.2719 0 1 1 1 724.90588 1448.80449 1448.79969 3.31 0.0024 0/0 0 0 8560626 HCD 30 MS2 55.03811 756.1 110 56.526 15962 15962 15961 QEplus033719.raw F4 731.8 729.1 831.3 617.9 901.7 725.1 492 2.28 1 FALSE 1.14E-05 0.000893 0.672 -250 70574 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGEIIAK [K].rGEIIAk.[Q] N-Term(TMT6plex); K7(TMT6plex) 10 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; Q9D0E1-2; Q3TQ66; Q3TL61; F6W322; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 1 3 3 0.0169 0 1 1 1 415.60825 1244.81018 1244.80908 0.89 0.00037 0/0 0 0 122093512 HCD 30 MS2 56.61333 692.3 8.979 56.5308 15964 15964 15961 QEplus033719.raw F4 682.6 684.3 780 503.3 830.2 673.3 418 3.54 1 FALSE 0.0002019 0.004044 0.526 -250 70582 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MAAPIDR [R].mAAPIDR.[V] N-Term(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; Q9D0E1-2; Q3TQ66; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 2 2 0.4032 0 1 1 1 501.78442 1002.56157 1002.56037 1.2 0.0006 0/0 0 0 74383200 HCD 30 MS2 11.05281 796.7 18.523 56.5331 15965 15965 15961 QEplus033719.raw F4 693.5 882.4 994.7 539.1 849.7 820.5 276 2.53 1 FALSE 0.001421 0.02016 0.28 -250 70590 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HYTEAIK [K].hYTEAIk.[R] N-Term(TMT6plex); K7(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 3 3 0.2943 0 1 1 1 440.59613 1319.77384 1319.77236 1.12 0.00049 0/0 0 0 58916060 HCD 30 MS2 39.84192 992.6 23.715 56.5353 15966 15966 15961 QEplus033719.raw F4 1866.2 670.7 864.9 744.6 1014.3 794.7 506 3.16 1 FALSE 0.0001187 0.003146 0.553 -250 70605 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGLDNVHK [K].qGLDNVHk.[Q] N-Term(TMT6plex); K8(TMT6plex) 13 Q5UE59 Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1 Q7M6Z7; Q7M701; Q7M700; Q5UE59; Q7M703; Q8CD76; F6UYN4; A0A5F8MPZ2; Q7M6Z8; Q7M6Z6; Q7M6Z9; E9Q7C9; Q7M702 Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1; Kinesin light chain 1 (Fragment) OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain (Fragment) OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1 0 3 3 0.4318 0 1 1 1 456.93811 1368.79978 1368.79997 -0.14 -0.00006 0/0 0 0 18820758 HCD 30 MS2 32.75568 672.9 46.053 56.5421 15969 15969 15961 QEplus033719.raw F4 782.9 424.6 681 565.9 683.8 899.3 337 3.52 1 FALSE 1.14E-05 0.0003344 0.756 -250 70612 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGQGAFGNMCR [R].sGQGAFGNMcR.[G] N-Term(TMT6plex); C10(Carbamidomethyl) 1 Q9D8E6 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3 Q9D8E6 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3 0 3 3 0.7855 0 1 1 1 471.89099 1413.65842 1413.65647 1.38 0.00065 0/0 0 0 12374365 HCD 30 MS2 39.41789 990 110 56.5446 15970 15970 15961 QEplus033719.raw F4 1219.1 642.6 1018.3 953.1 809.2 1297.9 50 3.87 1 FALSE 1.14E-05 0.0002069 0.797 -250 70618 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HKTDLNHENLK [K].hkTDLNHENLk.[G] N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex) 3 P07310 Creatine kinase M-type OS=Mus musculus OX=10090 GN=Ckm PE=1 SV=1 P07310; A0A0J9YKD4; Q9D6U7 Creatine kinase M-type OS=Mus musculus OX=10090 GN=Ckm PE=1 SV=1; Creatine kinase OS=Mus musculus OX=10090 GN=Ckm PE=1 SV=1; Creatine kinase OS=Mus musculus OX=10090 GN=Ckm PE=2 SV=1 1 4 4 0.3219 0 1 1 1 509.80228 2036.18728 2036.18558 0.83 0.00042 0/0 0 0 11947161 HCD 30 MS2 58.31704 647.4 46.314 56.5469 15971 15971 15961 QEplus033719.raw F4 833.5 357.3 634.1 1048.6 473.7 537.2 398 3.2 1 FALSE 5.44E-05 0.002291 0.585 -250 70647 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RWAASPK [K].rWAASPk.[S] N-Term(TMT6plex); K7(TMT6plex) 9 A0A1L1SQ51; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1;Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q8C9Z8; Q71LX4; Q80TM2; A0A1L1SQ51; B2RY15; Q3UHS6; E9PUM4; P26039; Q3TN69 FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=3; MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1 1 3 3 0.3895 0 1 1 1 425.2644 1273.77866 1273.77811 0.43 0.00018 0/0 0 0 81209104 HCD 30 MS2 15.19257 678.4 11.758 56.5612 15976 15976 15972 QEplus033719.raw F4 810.3 548.9 706.9 478.9 859.8 665.3 464 2.85 2 FALSE 1.14E-05 0.0002917 0.768 -250 70653 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EANQAINPK [R].eANQAINPk.[L] N-Term(TMT6plex); K9(TMT6plex) 7 Q5U222 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1 Q9CSD9; Q3UXW3; Q5U222; Q3V0Z8; A1L333; Q61656; Q8BTS0 Helicase C-terminal domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 0 3 3 0.5722 0 1 1 1 481.61844 1442.84076 1442.83675 2.78 0.00134 0/0 0 0 78625648 HCD 30 MS2 32.23222 551 13.531 56.5635 15977 15977 15972 QEplus033719.raw F4 570.1 475.6 542.6 368.9 776 573 366 3.6 1 FALSE 1.14E-05 0.0003724 0.747 -250 70659 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALCTGEK [R].aLcTGEk.[G] N-Term(TMT6plex); C3(Carbamidomethyl); K7(TMT6plex) 4 Q9CR16; Q9ERU9 Peptidyl-prolyl cis-trans isomerase D OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=3;E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 Q9CR16; Q3UB60; Q99KR7; Q9ERU9 "Peptidyl-prolyl cis-trans isomerase D OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppid PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase F, mitochondrial OS=Mus musculus OX=10090 GN=Ppif PE=1 SV=1; E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2" 0 2 2 0.0577 0 1 1 1 618.85529 1236.70329 1236.70223 0.86 0.00053 0/0 0 0 56429916 HCD 30 MS2 8.822454 1235.9 31.428 56.5657 15978 15978 15972 QEplus033719.raw F4 1310.5 1007.3 1251.2 1047.1 1696 1103.6 396 2.6 2 FALSE 0.0008445 0.01164 0.379 -250 70679 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YVETQAK [R].yVETQAk.[E] N-Term(TMT6plex); K7(TMT6plex) 2 Q9DBZ5 Eukaryotic translation initiation factor 3 subunit K OS=Mus musculus OX=10090 GN=Eif3k PE=1 SV=1 A0A140LJ59; Q9DBZ5 Eukaryotic translation initiation factor 3 subunit K OS=Mus musculus OX=10090 GN=Eif3k PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit K OS=Mus musculus OX=10090 GN=Eif3k PE=1 SV=1 0 2 2 0.5878 0 1 1 1 648.88251 1296.75774 1296.75637 1.05 0.00068 0/0 0 0 38163596 HCD 30 MS2 9.961621 1303.8 57.496 56.5703 15980 15980 15972 QEplus033719.raw F4 1345.2 1089.9 1325 1120.6 1731.5 1210.4 330 2.62 1 FALSE 0.0008445 0.01166 0.378 -250 70693 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FEDTSPADER [K].fEDTSPADER.[L] N-Term(TMT6plex) 6 Q922R9 Trap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1 Q3TSG8; Q922R9; Q3UPJ8; Q9CQN1; Q3TK29; Q922Z3 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; Trap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; Heat shock protein 75 kDa, mitochondrial OS=Mus musculus OX=10090 GN=Trap1 PE=1 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; Trap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1" 0 2 2 0.7974 0 1 1 1 698.33337 1395.65947 1395.65895 0.37 0.00026 0/0 0 0 24505952 HCD 30 MS2 4.578354 676.8 110 56.575 15982 15982 15972 QEplus033719.raw F4 681.3 541 746.1 701.8 615.5 775.1 45 3.8 1 FALSE 1.14E-05 2.03E-07 1.369 -250 70699 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MSGEEAEIR [R].mSGEEAEIR.[F] N-Term(TMT6plex) 5 E9QNN1 DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1 O70133-2; O70133-3; E9QNN1; A0A087WPL5; O70133 Isoform 2 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; Isoform 3 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=2 0 2 2 0.5333 0 1 1 1 625.8158 1250.62432 1250.62482 -0.4 -0.00025 0/0 0 0 35574276 HCD 30 MS2 22.39132 599.4 41.605 56.5824 15984 15984 15983 QEplus033719.raw F4 566.4 504.9 627.3 555.9 691.7 650.1 165 3.3 1 FALSE 1.14E-05 3.57E-06 1.132 -250 70720 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YTRPTPVQK [R].yTRPTPVQk.[H] N-Term(TMT6plex); K9(TMT6plex) 6 B9EKE9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1 B9EKE9; B7ZWF1; Q62095; Q3TQX5; P16381; Q3U484 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; ATP-dependent RNA helicase DDX3Y OS=Mus musculus OX=10090 GN=Ddx3y PE=1 SV=2; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=1; Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus OX=10090 GN=D1Pas1 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3y PE=2 SV=1 0 3 3 0.5617 0 1 1 1 516.64905 1547.93259 1547.93098 1.04 0.00054 0/0 0 0 93870728 HCD 30 MS2 10.14552 1050.6 21.283 56.5894 15987 15987 15983 QEplus033719.raw F4 1001 1064 1226.9 761 1182.7 1068.1 487 3.08 1 FALSE 0.001318 0.01815 0.298 -250 70724 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPCASQSSLK [R].qPcASQSSLk.[D] N-Term(TMT6plex); C3(Carbamidomethyl); K10(TMT6plex) 2 Q9EPU0 Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 PE=1 SV=2 Q9EPU0; Q9EPU0-2 Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 PE=1 SV=2; Isoform 2 of Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 0 2 2 0.6484 0 1 1 1 782.43274 1563.8582 1563.8565 1.09 0.00085 0/0 0 0 8450553 HCD 30 MS2 15.26263 464.9 110 56.5964 15990 15990 15983 QEplus033719.raw F4 467.1 422.3 544.4 372.9 489.6 493.1 402 4.01 1 FALSE 1.14E-05 9.40E-06 1.052 -250 70772 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YTGNTYK [K].yTGNTYk.[V] N-Term(TMT6plex); K7(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; B9EHT6; A0A087WR50; Q3UGY5; Q4KL80; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.4755 0 1 1 1 652.86615 1304.72502 1304.72507 -0.04 -0.00002 0/0 0 0 37995068 HCD 30 MS2 2.447609 1298.8 40.851 56.6181 15998 15998 15994 QEplus033719.raw F4 1320.8 1194 1423.4 1602.5 1051.5 1200.3 383 2.65 3 FALSE 0.001351 0.0191 0.289 -250 70780 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IEQAEK [KR].iEQAEk.[KGA] N-Term(TMT6plex); K6(TMT6plex) 4 E9PZ64; Q8C803; A0A171EBL0; Q80VN0 NGFI-A-binding protein 1 OS=Mus musculus OX=10090 GN=Nab1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cfap100 PE=2 SV=1; Cilia- and flagella-associated protein 100 OS=Mus musculus OX=10090 GN=Cfap100 PE=1 SV=1; Cilia- and flagella-associated protein 100 OS=Mus musculus OX=10090 GN=Cfap100 PE=2 SV=2 0 2 2 0.1892 0 1 1 1 588.35626 1175.70525 1175.70361 1.39 0.00082 0/0 0 0 37184088 HCD 30 MS2 29.21367 1541.4 51.396 56.6203 15999 15999 15994 QEplus033719.raw F4 3036.9 487.6 1424.3 1645.7 645.8 2008.1 516 2.22 4 FALSE 0.003397 0.06546 0.1 -250 70781 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEQAEK [KR].lEQAEk.[KGA] N-Term(TMT6plex); K6(TMT6plex) 11 P58774; A2AIM4; P58774-2; Q9JI91 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2;Alpha-actinin-2 OS=Mus musculus OX=10090 GN=Actn2 PE=1 SV=2 Q9D1R6; Q91VH3; Q5FW75; P58774; A2AIM4; Q3SX28; P58774-2; Q9JI91; A2AIM5; Q61344; Q8K3Q4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Actinin alpha 2 OS=Mus musculus OX=10090 GN=Actn2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Alpha-actinin-2 OS=Mus musculus OX=10090 GN=Actn2 PE=1 SV=2; Tropomyosin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=8; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Actinin alpha 2 OS=Mus musculus OX=10090 GN=Actn2 PE=2 SV=1 0 2 2 0.1892 0 1 2 2 588.35626 1175.70525 1175.70361 1.39 0.00082 0/0 0 0 37184088 HCD 30 MS2 29.21367 1541.4 51.396 56.6203 15999 15999 15994 QEplus033719.raw F4 3036.9 487.6 1424.3 1645.7 645.8 2008.1 516 2.22 4 TRUE 0.003397 0.06546 0.1 -250 70789 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPAAAGVK [K].kPAAAGVk.[K] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 2 Q1WWK3 Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1 Q1WWK3; P43276 Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1; Histone H1.5 OS=Mus musculus OX=10090 GN=H1-5 PE=1 SV=2 0 3 3 0.2382 0 1 1 1 476.98898 1428.9524 1428.95055 1.29 0.00062 0/0 0 0 22409470 HCD 30 MS2 47.86621 1397.5 70.38 56.6226 16000 16000 15994 QEplus033719.raw F4 2488.4 983 1489 821.5 1159.5 1443.9 93 3.19 1 FALSE 1.14E-05 1.11E-05 1.039 -250 70796 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSEDADELHK [K].tSEDADELHk.[I] N-Term(TMT6plex); K10(TMT6plex) 1 Q9JIH2 Nuclear pore complex protein Nup50 OS=Mus musculus OX=10090 GN=Nup50 PE=1 SV=3 Q9JIH2 Nuclear pore complex protein Nup50 OS=Mus musculus OX=10090 GN=Nup50 PE=1 SV=3 0 3 3 0.7896 0 1 1 1 534.95154 1602.84006 1602.83754 1.58 0.00084 0/0 0 0 20851778 HCD 30 MS2 39.40723 1165.1 82.294 56.6249 16001 16001 15994 QEplus033719.raw F4 1409.9 1141.5 1197.7 865.5 1386 989.9 295 3.66 1 FALSE 1.14E-05 1.12E-09 1.798 -250 70799 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYTGEMGR [K].vYTGEMGR.[L] N-Term(TMT6plex) 3 Q05DV1 NADPH--hemoprotein reductase OS=Mus musculus OX=10090 GN=Por PE=1 SV=1 Q05DV1; E9Q997; P37040 NADPH--hemoprotein reductase OS=Mus musculus OX=10090 GN=Por PE=1 SV=1; NADPH--cytochrome P450 reductase (Fragment) OS=Mus musculus OX=10090 GN=Por PE=1 SV=8; NADPH--cytochrome P450 reductase OS=Mus musculus OX=10090 GN=Por PE=1 SV=2 0 2 2 0.6406 0 1 1 1 571.29803 1141.58879 1141.58731 1.3 0.00074 0/0 0 0 20648970 HCD 30 MS2 47.26698 1184.7 62.441 56.6271 16002 16002 15994 QEplus033719.raw F4 1181.3 1081 1305.3 1023.5 1325.5 1191.3 120 2.56 1 FALSE 1.14E-05 0.0002177 0.792 -250 70805 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGEIIAK [K].rGEIIAk.[Q] N-Term(TMT6plex); K7(TMT6plex) 10 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; Q9D0E1-2; Q3TQ66; Q3TL61; F6W322; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 1 2 2 0.0778 0 1 1 1 622.90918 1244.81108 1244.80908 1.61 0.001 0/0 0 0 19569584 HCD 30 MS2 53.87407 1137.7 72.377 56.6294 16003 16003 15994 QEplus033719.raw F4 1158.6 874.3 1261.2 1014.2 1177 1340.9 350 1.8 1 FALSE 0.0008268 0.01134 0.383 -250 70824 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SACSAIQK [K].sAcSAIQk.[K] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 2 Q99KC8 von Willebrand factor A domain-containing protein 5A OS=Mus musculus OX=10090 GN=Vwa5a PE=1 SV=2 F6TIL5; Q99KC8 von Willebrand factor A domain-containing protein 5A (Fragment) OS=Mus musculus OX=10090 GN=Vwa5a PE=1 SV=1; von Willebrand factor A domain-containing protein 5A OS=Mus musculus OX=10090 GN=Vwa5a PE=1 SV=2 0 2 2 0.5694 0 1 1 1 661.87976 1322.75224 1322.75024 1.51 0.001 0/0 0 0 21514180 HCD 30 MS2 15.76488 1289.8 110 56.6415 16007 16007 16005 QEplus033719.raw F4 1173.3 1248.1 1404.1 987.6 1666.6 1259.4 314 2.88 1 FALSE 1.14E-05 0.0002628 0.777 -250 70832 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTAAHGLELR [R].tTAAHGLELR.[V] N-Term(TMT6plex) 3 Q61024 Asparagine synthetase [glutamine-hydrolyzing] OS=Mus musculus OX=10090 GN=Asns PE=1 SV=3 Q3TIA9; Q3TV20; Q61024 Asparagine synthetase [glutamine-hydrolyzing] OS=Mus musculus OX=10090 GN=Asns PE=2 SV=1; Asparagine synthetase [glutamine-hydrolyzing] OS=Mus musculus OX=10090 GN=Asns PE=2 SV=1; Asparagine synthetase [glutamine-hydrolyzing] OS=Mus musculus OX=10090 GN=Asns PE=1 SV=3 0 3 3 0.59 0 1 1 1 433.25259 1297.74323 1297.74256 0.51 0.00022 0/0 0 0 55203736 HCD 30 MS2 56.05763 543.9 15.887 56.6437 16008 16008 16005 QEplus033719.raw F4 478.6 454.5 621.1 464.3 638.9 605.7 295 4.22 1 FALSE 1.14E-05 2.04E-06 1.179 -250 70839 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FSSDASK [K].fSSDASk.[V] N-Term(TMT6plex); K7(TMT6plex) 3 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q3UXJ8; Q8VHX6-2; Q8VHX6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flnc PE=2 SV=1; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.0381 0 1 1 1 600.33838 1199.66948 1199.66722 1.88 0.00113 0/0 0 0 44655480 HCD 30 MS2 15.34399 1259.3 44.003 56.646 16009 16009 16005 QEplus033719.raw F4 1928 529.1 1439 1395.7 672.4 1591.5 241 2.36 1 FALSE 0.005081 0.08772 0.041 -250 70846 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEGFDTYR [R].sEGFDTYR.[C] N-Term(TMT6plex) 3 P17918 Proliferating cell nuclear antigen OS=Mus musculus OX=10090 GN=Pcna PE=1 SV=2 P17918; Q9CZD6; Q91ZH2 Proliferating cell nuclear antigen OS=Mus musculus OX=10090 GN=Pcna PE=1 SV=2; Proliferating cell nuclear antigen OS=Mus musculus OX=10090 GN=Pcna PE=2 SV=1; Proliferating cell nuclear antigen OS=Mus musculus OX=10090 GN=Pcna PE=2 SV=1 0 2 2 0.6187 0 1 1 1 602.29663 1203.58599 1203.58433 1.37 0.00083 0/0 0 0 31377872 HCD 30 MS2 6.767081 1126.5 62.802 56.6483 16010 16010 16005 QEplus033719.raw F4 1143.2 1310.7 960.7 683.2 1830.5 830.7 51 2.57 1 FALSE 0.0003996 0.007239 0.453 -250 70868 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSVYEEK [R].qSVYEEk.[L] N-Term(TMT6plex); K7(TMT6plex) 4 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1; Q6A0B9; Q3UL99 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; MKIAA0139 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 0 2 2 0.5752 0 1 1 1 670.87787 1340.74846 1340.7462 1.68 0.00113 0/0 0 0 28463766 HCD 30 MS2 11.62827 1041.7 67.531 56.6551 16013 16013 16005 QEplus033719.raw F4 1023.7 892.9 1128.8 845.2 1223.4 1136.1 306 3.06 1 FALSE 0.0007151 0.01032 0.399 -250 70876 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAPSEYR [K].lAPSEYR.[Y] N-Term(TMT6plex) 2 Q3URM4 Thioredoxin domain-containing protein OS=Mus musculus OX=10090 GN=Erp44 PE=2 SV=1 Q3URM4; Q9D1Q6 Thioredoxin domain-containing protein OS=Mus musculus OX=10090 GN=Erp44 PE=2 SV=1; Endoplasmic reticulum resident protein 44 OS=Mus musculus OX=10090 GN=Erp44 PE=1 SV=1 0 2 2 0.3484 0 1 1 1 532.80151 1064.59575 1064.59378 1.86 0.00099 0/0 0 0 22035334 HCD 30 MS2 32.11643 1038 44.602 56.6573 16014 16014 16005 QEplus033719.raw F4 1400.9 892.1 1216.2 801.7 859.6 1057.8 267 2.21 1 FALSE 0.001318 0.01812 0.298 -250 70881 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QFSANDK [K].qFSANDk.[V] N-Term(TMT6plex); K7(TMT6plex) 6 Q66JR7 Pgm2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1 A2CEK3; Q66JR7; Q9D0F9; Q3U6X6; Q5RJV4; Q7TNU0 Phosphoglucomutase-1 OS=Mus musculus OX=10090 GN=Pgm1 PE=1 SV=1; Pgm2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1; Phosphoglucomutase-1 OS=Mus musculus OX=10090 GN=Pgm1 PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1; Phosphoglucomutase 2 OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1; Pgm2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1 0 2 2 0.3398 0 1 1 1 634.35486 1267.70244 1267.70467 -1.76 -0.00112 0/0 0 0 17790322 HCD 30 MS2 37.54799 1850 110 56.6599 16015 16015 16005 QEplus033719.raw F4 2000.1 1166.9 1709.5 2363.3 1697.8 2162.4 303 2.56 1 FALSE 0.001275 0.01741 0.305 -250 70890 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESGEGAEAEGATAEGAK [K].eSGEGAEAEGATAEGAk.[D] N-Term(TMT6plex); K17(TMT6plex) 2 P26645 Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2 A0A0A1HAM8; P26645 80K protein OS=Mus musculus OX=10090 GN=Marcks PE=2 SV=1; Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2 0 3 3 0.8195 0 1 1 1 674.67346 2022.00583 2022.00276 1.52 0.00102 0/0 0 0 19410254 HCD 30 MS2 0 431.7 110 56.6672 16017 16017 16016 QEplus033719.raw F4 434.1 336.3 425.6 297.4 697.5 399.4 213 5.54 1 FALSE 1.14E-05 2.16E-15 2.883 -250 70899 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YTQPNICR [K].yTQPNIcR.[N] N-Term(TMT6plex); C7(Carbamidomethyl) 3 Q3ULG5 DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1 Q3ULG5; Q3UC10; P97311 DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=2 SV=1; DNA replication licensing factor MCM6 OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1 0 2 2 0.6399 0 1 1 1 640.83539 1280.6635 1280.66187 1.27 0.00081 0/0 0 0 14075972 HCD 30 MS2 21.17952 934.2 110 56.6697 16018 16018 16016 QEplus033719.raw F4 910.5 1004.4 880 569.2 1480.7 760.5 232 2.86 1 FALSE 0.0007816 0.01086 0.391 -250 70914 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIVFHR [K].sIVFHR.[K] N-Term(TMT6plex) 3 Q3ULW0 GTP-binding nuclear protein Ran OS=Mus musculus OX=10090 GN=Ran PE=2 SV=1 Q3ULW0; Q14AA6; P62827 GTP-binding nuclear protein Ran OS=Mus musculus OX=10090 GN=Ran PE=2 SV=1; GTP-binding nuclear protein Ran OS=Mus musculus OX=10090 GN=1700009N14Rik PE=1 SV=1; GTP-binding nuclear protein Ran OS=Mus musculus OX=10090 GN=Ran PE=1 SV=3 0 2 2 0.177 0 1 1 1 494.30106 987.59484 987.59372 1.13 0.00056 0/0 0 0 34616672 HCD 30 MS2 23.50653 815.7 30.787 56.6742 16020 16020 16016 QEplus033719.raw F4 895.1 765 837.7 670.2 1069.8 656.1 385 2.09 1 FALSE 0.003058 0.05976 0.115 -250 70924 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVTGTLDANR [R].kVTGTLDANR.[S] N-Term(TMT6plex); K1(TMT6plex) 3 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 A0A0G2JDU7; F7BDR1; Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=1; Fascin (Fragment) OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=1; Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 1 3 3 0.5317 0 1 1 1 511.64407 1532.91767 1532.91606 1.05 0.00054 0/0 0 0 30303692 HCD 30 MS2 44.12997 1142.2 65.316 56.6765 16021 16021 16016 QEplus033719.raw F4 1181.9 1179.8 1406.5 912.6 1233.4 939 426 2.84 1 FALSE 1.14E-05 0.0002178 0.792 -250 70941 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQHLIAR [R].mQHLIAR.[E] N-Term(TMT6plex) 2 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm 0 2 2 0.7032 0 1 1 1 549.33038 1097.65349 1097.6451 7.64 0.0042 0/0 0 0 22468266 HCD 30 MS2 21.97746 1279.3 54.056 56.681 16023 16023 16016 QEplus033719.raw F4 1363.7 935.5 1313.8 1440.7 1300.1 1322.2 84 2.19 2 FALSE 0.001028 0.0134 0.353 -250 70946 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDVGNVK [R].eDVGNVk.[F] N-Term(TMT6plex); K7(TMT6plex) 1 Q3UDE2 Tubulin--tyrosine ligase-like protein 12 OS=Mus musculus OX=10090 GN=Ttll12 PE=1 SV=1 Q3UDE2 Tubulin--tyrosine ligase-like protein 12 OS=Mus musculus OX=10090 GN=Ttll12 PE=1 SV=1 0 2 2 0.3271 0 1 1 1 609.85944 1218.7116 1218.70942 1.78 0.00109 0/0 0 0 19472086 HCD 30 MS2 19.54816 1483.6 110 56.6835 16024 16024 16016 QEplus033719.raw F4 1613.8 1146.7 1411.2 1463.8 1774.9 1491.2 489 2.66 1 FALSE 0.0003996 0.00718 0.455 -250 70954 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFTTQNQK [K].eFTTQNQk.[S] N-Term(TMT6plex); K8(TMT6plex) 4 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q8CD09; Q9ERG0; Q8C7S2; Q8C3R7 LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 0 2 2 0.6516 0 1 1 1 727.40619 1453.8051 1453.80511 -0.01 -0.00001 0/0 0 0 19424544 HCD 30 MS2 0 1145.3 110 56.686 16025 16025 16016 QEplus033719.raw F4 1178.6 1189.5 1416 691 1253.9 1142.7 310 3.53 1 FALSE 1.14E-05 0.0002769 0.772 -250 70966 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAEEIGEK [K].qAEEIGEk.[L] N-Term(TMT6plex); K8(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5321 0 1 1 1 681.38898 1361.77068 1361.76767 2.21 0.00151 0/0 0 0 36940892 HCD 30 MS2 19.60848 870.5 39.187 56.6956 16028 16028 16027 QEplus033719.raw F4 935.6 633.1 850.5 858.8 948.5 996.5 486 3.27 2 FALSE 1.14E-05 0.0003273 0.758 -250 70990 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQHLIAR [R].mQHLIAR.[E] N-Term(TMT6plex) 2 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm 0 3 3 0.6173 0 1 1 1 366.55365 1097.6464 1097.6451 1.18 0.00043 0/0 0 0 187003200 HCD 30 MS2 14.38732 259.2 5.623 56.7023 16031 16031 16027 QEplus033719.raw F4 249.9 209.5 253.4 263.8 257.3 321.1 117 3.24 2 FALSE 0.001736 0.02943 0.219 -250 70997 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELSDIAHR [K].eLSDIAHR.[I] N-Term(TMT6plex) 10 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 A0A0U1RPT5; Q9CPQ9; D3YWI1; A0A0U1RPN8; D3YV98; A6ZI46; D3Z510; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=2; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 0 2 2 0.5017 0 1 1 1 585.32819 1169.6491 1169.6476 1.28 0.00075 0/0 0 0 97795216 HCD 30 MS2 4.401519 545.2 14.974 56.7046 16032 16032 16027 QEplus033719.raw F4 646.3 330.1 500.1 758.7 474.8 561.1 202 2.97 1 FALSE 1.14E-05 0.0004158 0.738 -250 71001 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQHLIAR [R].mQHLIAR.[E] N-Term(TMT6plex) 2 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm 0 2 2 0.6471 0 1 1 1 549.32684 1097.64641 1097.6451 1.19 0.00066 0/0 0 0 45573900 HCD 30 MS2 19.07902 1146.1 37.907 56.7069 16033 16033 16027 QEplus033719.raw F4 1192.2 937 1176.1 1204.4 1197.1 1169.9 117 2.38 2 FALSE 0.001047 0.01362 0.35 -250 71018 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RKNPAMYENDK [K].rkNPAMYENDk.[-] N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex) 2 Q9CQ69 Cytochrome b-c1 complex subunit 8 OS=Mus musculus OX=10090 GN=Uqcrq PE=1 SV=3 Q9CQ69; I7HPX6 Cytochrome b-c1 complex subunit 8 OS=Mus musculus OX=10090 GN=Uqcrq PE=1 SV=3; Complex III subunit 8 OS=Mus musculus OX=10090 GN=Uqcrq PE=1 SV=1 2 4 4 0.6352 0 1 1 1 514.04291 2053.1498 2053.14676 1.48 0.00076 0/0 0 0 17279588 HCD 30 MS2 32.79311 904.1 88.264 56.7114 16035 16035 16027 QEplus033719.raw F4 912.2 728.3 1066.2 844.2 792.9 1080.8 447 4.77 1 FALSE 1.14E-05 1.49E-06 1.204 -250 71035 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTPGESGAAGPSGPIGSR [R].gTPGESGAAGPSGPIGSR.[G] N-Term(TMT6plex) 4 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.7462 0 1 1 1 892.46185 1783.91643 1783.91361 1.58 0.00141 0/0 0 0 16052362 HCD 30 MS2 0 394.9 110 56.7162 16037 16037 16027 QEplus033719.raw F4 320.6 428.5 506.7 160.9 557.3 395.6 264 5.91 1 FALSE 1.14E-05 6.31E-16 3.3 -250 71045 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RILPKPTR [R].rILPkPTR.[K] N-Term(TMT6plex); K5(TMT6plex) 1 Q4FZE6 40S ribosomal protein S7 OS=Mus musculus OX=10090 GN=Rps7 PE=2 SV=1 Q4FZE6 40S ribosomal protein S7 OS=Mus musculus OX=10090 GN=Rps7 PE=2 SV=1 1 4 4 1 0 1 1 1 360.49622 1438.96303 1438.96222 0.56 0.0002 0/0 0 0 23426860 HCD 30 MS2 16.44098 469.7 40.787 56.7257 16040 16040 16038 QEplus033719.raw F4 593.4 342.7 526.2 396.4 405.1 554.5 59 2.47 1 FALSE 0.001676 0.02755 0.229 -250 71046 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGQVIR [K].vGQVIR.[VI] N-Term(TMT6plex) 6 Q3UPA3 Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1 Q3UUX9; Q3UPA3; Q61598-2; Q3UC72; A0A1Y7VL99; Q61598 Rab GDP dissociation inhibitor OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Isoform 2 of Rab GDP dissociation inhibitor beta OS=Mus musculus OX=10090 GN=Gdi2; Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Mus musculus OX=10090 GN=Gdi2 PE=1 SV=1 0 2 2 0.2657 0 1 1 1 450.79547 900.58367 900.58282 0.94 0.00042 0/0 0 0 69230104 HCD 30 MS2 30.92769 782.8 16.835 56.728 16041 16041 16038 QEplus033719.raw F4 999.6 619.6 803.6 553.3 926 794.8 52 2.07 1 FALSE 0.007592 0.1241 -0.05 -250 71047 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGQVLR [K].vGQVLR.[VI] N-Term(TMT6plex) 1 Q8CFS6 Potassium voltage-gated channel subfamily V member 2 OS=Mus musculus OX=10090 GN=Kcnv2 PE=2 SV=1 0 2 2 0.2657 0 1 2 2 450.79547 900.58367 900.58282 0.94 0.00042 0/0 0 0 69230104 HCD 30 MS2 30.92769 782.8 16.835 56.728 16041 16041 16038 QEplus033719.raw F4 999.6 619.6 803.6 553.3 926 794.8 52 2.07 1 FALSE 0.007592 0.1241 -0.05 -250 71076 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPETAAALK [R].rPETAAALk.[R] N-Term(TMT6plex); K9(TMT6plex) 2 P58064 "28S ribosomal protein S6, mitochondrial OS=Mus musculus OX=10090 GN=Mrps6 PE=1 SV=3" A0A338P7H3; P58064 "Predicted gene, 49711 OS=Mus musculus OX=10090 GN=Gm49711 PE=3 SV=1; 28S ribosomal protein S6, mitochondrial OS=Mus musculus OX=10090 GN=Mrps6 PE=1 SV=3" 0 3 3 0.5165 0 1 1 1 472.29831 1414.88037 1414.87822 1.52 0.00072 0/0 0 0 32228512 HCD 30 MS2 60.43941 670.8 36.932 56.7347 16044 16044 16038 QEplus033719.raw F4 692.1 545.2 729.7 625.5 661 771.5 329 3.33 1 FALSE 1.14E-05 0.0001035 0.854 -250 71088 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQQQLTAMK [K].rQQQLTAMk.[V] N-Term(TMT6plex); K9(TMT6plex) 9 Q69ZX3; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; A0A2R8VHF9; A0A338P6K2; A2VCK0; O08638-2; O08638; Q8VDD5; A0A2R8VKI5; E9QPE7 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-9 (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2 1 3 3 0.6715 0 1 1 1 521.31384 1561.92698 1561.92485 1.36 0.00071 0/0 0 0 15958015 HCD 30 MS2 37.08016 1126.4 76.366 56.7393 16046 16046 16038 QEplus033719.raw F4 1191.2 1052.7 1221.9 781 1396.1 1115.5 443 4.84 2 FALSE 1.14E-05 9.30E-09 1.623 -250 71095 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPSMSTTETK [K].sPSMSTTETk.[A] N-Term(TMT6plex); K10(TMT6plex) 6 Q8CE80 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1 A0A338P6J9; P51125-6; Q8CE80; P51125; P51125-3; P51125-2 Calpain inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 6 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpastatin OS=Mus musculus OX=10090 GN=Cast PE=1 SV=2; Isoform 3 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Isoform 2 of Calpastatin OS=Mus musculus OX=10090 GN=Cast 0 2 2 0.631 0 1 1 1 763.91168 1526.81609 1526.81363 1.61 0.00123 0/0 0 0 11656561 HCD 30 MS2 6.952373 614 110 56.7418 16047 16047 16038 QEplus033719.raw F4 622.1 642.4 659.9 426.7 777.8 555.2 294 3.36 1 FALSE 1.14E-05 8.31E-08 1.442 -250 71104 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEVQVSDK [K].gEVQVSDk.[E] N-Term(TMT6plex); K8(TMT6plex) 2 P70122 Ribosome maturation protein SBDS OS=Mus musculus OX=10090 GN=Sbds PE=1 SV=4 P70122; F6TN03 Ribosome maturation protein SBDS OS=Mus musculus OX=10090 GN=Sbds PE=1 SV=4; Ribosome maturation protein SBDS (Fragment) OS=Mus musculus OX=10090 GN=Sbds PE=1 SV=1 0 2 2 0.3333 0 1 1 1 660.38422 1319.76116 1319.7571 3.07 0.00203 0/0 0 0 11288792 HCD 30 MS2 12.2908 1068.1 110 56.7443 16048 16048 16038 QEplus033719.raw F4 1092.7 944.4 1056.1 921.6 1322.3 1071.5 496 2.4 1 FALSE 1.14E-05 0.0001365 0.831 -250 71111 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQPSSLQPK [R].sQPSSLQPk.[S] N-Term(TMT6plex); K9(TMT6plex) 3 Q91VX2 Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1 F6WTC8; Q91VX2; A2AMY5 Ubiquitin-associated protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1; Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1; Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1 0 2 2 0.3852 0 1 1 1 715.42603 1429.84477 1429.8415 2.29 0.00164 0/0 0 0 8419819 HCD 30 MS2 16.22171 440.1 110 56.7516 16050 16050 16049 QEplus033719.raw F4 464.7 317.5 503 354.2 421.1 579.8 335 3.66 1 FALSE 1.14E-05 1.38E-06 1.211 -250 71118 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GFSGAGEK [K].gFSGAGEk.[L] N-Term(TMT6plex); K8(TMT6plex) 1 Q9ERU9 E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 Q9ERU9 E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 0 2 2 0.0252 0 1 1 1 605.84589 1210.6845 1210.68321 1.06 0.00064 0/0 0 0 9975972 HCD 30 MS2 0 937.1 110 56.7541 16051 16051 16049 QEplus033719.raw F4 991.5 802.8 929.5 710.5 1283.7 904.9 281 2.78 1 FALSE 0.0002218 0.004606 0.511 -250 71131 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHAQGPGLK [R].vHAQGPGLk.[E] N-Term(TMT6plex); K9(TMT6plex) 1 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 0 3 3 0.7082 0 1 1 1 455.61902 1364.8425 1364.84144 0.78 0.00035 0/0 0 0 62400540 HCD 30 MS2 18.08294 619 20.3 56.7587 16053 16053 16049 QEplus033719.raw F4 832.7 521.7 631.8 415.3 732.4 579.8 316 4.49 1 FALSE 1.14E-05 2.50E-07 1.352 -250 71149 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TCIAEK [R].tcIAEk.[L] N-Term(TMT6plex); C2(Carbamidomethyl); K6(TMT6plex) 1 Q9R0P5 Destrin OS=Mus musculus OX=10090 GN=Dstn PE=1 SV=3 Q9R0P5 Destrin OS=Mus musculus OX=10090 GN=Dstn PE=1 SV=3 0 2 2 0.2163 0 1 1 1 590.34412 1179.68096 1179.68077 0.16 0.00009 0/0 0 0 33663688 HCD 30 MS2 27.41352 1391.2 51.19 56.7632 16055 16055 16049 QEplus033719.raw F4 1633.3 1239.8 1437.4 1005 1865.3 1166.3 343 2.45 1 FALSE 0.004816 0.08411 0.05 -250 71159 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTDEAAFQK [K].rTDEAAFQk.[V] N-Term(TMT6plex); K9(TMT6plex) 2 A0A0G2JGD2 Protein S100-A4 (Fragment) OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1 A0A0G2JGD2; P07091 Protein S100-A4 (Fragment) OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1; Protein S100-A4 OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1 1 3 3 0.5467 0 1 1 1 508.62512 1523.86081 1523.85821 1.71 0.00087 0/0 0 0 30767664 HCD 30 MS2 23.09072 1244.8 53.655 56.7655 16056 16056 16049 QEplus033719.raw F4 1305.4 1277.9 1332 765.9 1684.3 1103.1 407 4.5 1 FALSE 1.14E-05 8.42E-10 1.821 -250 71168 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEMVGEK [K].nEMVGEk.[G] N-Term(TMT6plex); K7(TMT6plex) 6 Q8C2D1 "Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1" Q3U890; Q8C2D1; Q61035; Q8VDX8; Q3UDH1; Q9D094 "Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars1 PE=1 SV=2; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1" 0 2 2 0.277 0 1 1 1 632.85315 1264.69902 1264.69714 1.49 0.00094 0/0 0 0 27043134 HCD 30 MS2 11.47295 1706.8 110 56.768 16057 16057 16049 QEplus033719.raw F4 1894.4 1245 1652 1493.8 2134.2 1821.1 380 2.78 1 FALSE 0.0006126 0.009094 0.42 -250 71175 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QADEIEK [K].qADEIEk.[IV] N-Term(TMT6plex); K7(TMT6plex) 4 P59999 Actin-related protein 2/3 complex subunit 4 OS=Mus musculus OX=10090 GN=Arpc4 PE=1 SV=3 P59999; Q9D3C4; Q8BVW6; Q7TPD9 Actin-related protein 2/3 complex subunit 4 OS=Mus musculus OX=10090 GN=Arpc4 PE=1 SV=3; Actin-related protein 2/3 complex subunit 4 OS=Mus musculus OX=10090 GN=Arpc4 PE=2 SV=1; Actin-related protein 2/3 complex subunit 4 OS=Mus musculus OX=10090 GN=Arpc4 PE=2 SV=1; Actin-related protein 2/3 complex subunit 4 OS=Mus musculus OX=10090 GN=Arpc4 PE=2 SV=1 0 2 2 0.4368 0 1 1 1 645.86768 1290.72807 1290.73055 -1.92 -0.00124 0/0 0 0 25913514 HCD 30 MS2 44.8503 1524.3 58.281 56.7703 16058 16058 16049 QEplus033719.raw F4 1592.3 1200.8 1468.3 1257.3 1884.4 1742.7 359 2.77 1 FALSE 0.001108 0.0144 0.34 -250 71184 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THMQDLK [R].tHMQDLk.[D] N-Term(TMT6plex); K7(TMT6plex) 13 E9Q1G8 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2 E9Q1G8; Q8C2A3; P28661-3; Q8C752; E9Q9F5; Q5DTS3; Q3UNN1; O55131; A0A5F8MP96; P28661-4; P28661-2; P28661; P28661-5 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Isoform 3 of Septin-4 OS=Mus musculus OX=10090 GN=Septin4; Septin-type G domain-containing protein OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin-7 (Fragment) OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin-7 OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=1; Septin-4 OS=Mus musculus OX=10090 GN=Septin4 PE=1 SV=1; Isoform 4 of Septin-4 OS=Mus musculus OX=10090 GN=Septin4; Isoform 2 of Septin-4 OS=Mus musculus OX=10090 GN=Septin4; Septin-4 OS=Mus musculus OX=10090 GN=Septin4 PE=1 SV=1; Isoform 5 of Septin-4 OS=Mus musculus OX=10090 GN=Septin4 0 3 3 0.6062 0 1 1 1 444.25687 1330.75605 1330.75533 0.54 0.00024 0/0 0 0 19985542 HCD 30 MS2 57.8682 971.6 45.413 56.7725 16059 16059 16049 QEplus033719.raw F4 999.2 895.5 1088.5 723.4 1090.8 1032.1 373 3.53 1 FALSE 3.35E-05 0.001327 0.637 -250 71191 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFTTQNQK [K].eFTTQNQk.[S] N-Term(TMT6plex); K8(TMT6plex) 4 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q8CD09; Q9ERG0; Q8C7S2; Q8C3R7 LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 0 3 3 0.4776 0 1 1 1 485.27298 1453.80439 1453.80511 -0.5 -0.00024 0/0 0 0 57419468 HCD 30 MS2 7.19669 785.9 23.544 56.7798 16061 16061 16060 QEplus033719.raw F4 911.2 637.8 927.7 565.4 817 856.3 318 3.79 1 FALSE 0.001177 0.01574 0.324 -250 71205 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YTGNTYK [K].yTGNTYk.[V] N-Term(TMT6plex); K7(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; B9EHT6; A0A087WR50; Q3UGY5; Q4KL80; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.3887 0 1 1 1 435.58063 1304.72733 1304.72507 1.73 0.00075 0/0 0 0 85059936 HCD 30 MS2 23.73854 390.5 12.159 56.7846 16063 16063 16060 QEplus033719.raw F4 345.2 301.4 450.8 489.6 297.3 459 391 2.47 3 FALSE 0.006833 0.1085 -0.016 -250 71212 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IIVNDR [K].iIVNDR.[Q] N-Term(TMT6plex) 2 Q99LF4 RNA-splicing ligase RtcB homolog OS=Mus musculus OX=10090 GN=Rtcb PE=1 SV=1 Q99LF4; Q3TJ01 RNA-splicing ligase RtcB homolog OS=Mus musculus OX=10090 GN=Rtcb PE=1 SV=1; RNA-splicing ligase RtcB homolog OS=Mus musculus OX=10090 GN=Rtcb PE=2 SV=1 0 2 2 0.2227 0 1 1 1 479.79831 958.58934 958.5883 1.09 0.00052 0/0 0 0 40897552 HCD 30 MS2 29.60377 766.3 29.22 56.7869 16064 16064 16060 QEplus033719.raw F4 719.7 702.7 908.6 638.9 764.3 863.7 227 2.29 1 FALSE 0.002448 0.04864 0.146 -250 71222 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESQESLKSPEEEDQR [K].eSQESLkSPEEEDQR.[T] N-Term(TMT6plex); K7(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 1 3 3 0.7105 0 1 1 1 750.38245 2249.13279 2249.12975 1.35 0.00101 0/0 0 0 29216398 HCD 30 MS2 16.75669 911.1 110 56.7894 16065 16065 16060 QEplus033719.raw F4 930.7 589.5 1180.1 1076.1 490.4 1200 252 4.56 1 FALSE 1.14E-05 7.82E-12 2.207 -250 71232 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPVTNIAR [R].sPVTNIAR.[T] N-Term(TMT6plex) 5 Q6A0C9 AP-2 complex subunit mu (Fragment) OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1 Q6A0C9; Q5FWI9; Q3TWV4; Q3TH69; Q3UCW9 AP-2 complex subunit mu (Fragment) OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1; AP-2 complex subunit mu OS=Mus musculus OX=10090 GN=Ap2m1 PE=1 SV=1; AP-2 complex subunit mu OS=Mus musculus OX=10090 GN=Ap2m1 PE=1 SV=1; AP-2 complex subunit mu OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1; MHD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1 0 2 2 0.2454 0 1 1 1 543.82837 1086.64946 1086.64687 2.38 0.00129 0/0 0 0 30782436 HCD 30 MS2 48.67776 664.4 22.002 56.7939 16067 16067 16060 QEplus033719.raw F4 774 555.7 682.8 584.4 762.9 626.5 307 2.16 1 FALSE 0.0006294 0.009711 0.409 -250 71240 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAIEMASR [K].eAIEMASR.[V] N-Term(TMT6plex) 17 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 F6XCT0; Q9QXZ0-3; B1ARU4; F6SHS0; E9QA63; E9QNP1; Q3UPG9; Q5DTZ2; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8 Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; MKIAA1251 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 2 2 0.4944 0 1 1 1 568.30383 1135.60039 1135.59787 2.21 0.00126 0/0 0 0 20760902 HCD 30 MS2 37.87699 1135.9 65.202 56.7962 16068 16068 16060 QEplus033719.raw F4 1289.2 677.9 1222.8 1253.7 965 1406.9 200 2.67 3 FALSE 0.0002019 0.004077 0.525 -250 71246 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AALSAGK [R].aALSAGk.[V] N-Term(TMT6plex); K7(TMT6plex) 2 Q8BWT1 "3-ketoacyl-CoA thiolase, mitochondrial OS=Mus musculus OX=10090 GN=Acaa2 PE=1 SV=3" Q3UKH3; Q8BWT1 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Acaa2 PE=2 SV=1; 3-ketoacyl-CoA thiolase, mitochondrial OS=Mus musculus OX=10090 GN=Acaa2 PE=1 SV=3" 0 2 2 0.1779 0 1 1 1 538.34821 1075.68913 1075.68757 1.46 0.00078 0/0 0 0 19945714 HCD 30 MS2 39.0072 1525.2 64.08 56.7984 16069 16069 16060 QEplus033719.raw F4 1866.1 1104.1 1706.5 1665.5 1286 1523 127 2.81 1 FALSE 0.0002909 0.006059 0.477 -250 71256 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TMTTSHLK [K].tMTTSHLk.[Q] N-Term(TMT6plex); K8(TMT6plex) 5 Q4FJW2 Drap1 protein OS=Mus musculus OX=10090 GN=Drap1 PE=1 SV=1 D3YYC2; G3UXH5; Q4FJW2; F6T9K1; D3YY09 Dr1-associated corepressor OS=Mus musculus OX=10090 GN=Drap1 PE=1 SV=1; Dr1-associated corepressor OS=Mus musculus OX=10090 GN=Drap1 PE=1 SV=1; Drap1 protein OS=Mus musculus OX=10090 GN=Drap1 PE=1 SV=1; Dr1-associated corepressor OS=Mus musculus OX=10090 GN=Drap1 PE=1 SV=2; Dr1-associated corepressor OS=Mus musculus OX=10090 GN=Drap1 PE=1 SV=1 0 3 3 0.3469 0 1 1 1 459.60385 1376.797 1376.79719 -0.14 -0.00006 0/0 0 0 16146288 HCD 30 MS2 17.26132 697 56.85 56.8007 16070 16070 16060 QEplus033719.raw F4 884.6 556.8 718.4 567.4 735.9 718.6 524 3.69 1 FALSE 1.14E-05 6.92E-05 0.888 -250 71271 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GETGFQGK [R].gETGFQGk.[T] N-Term(TMT6plex); K8(TMT6plex) 6 B1AWB9; O88207-2 "Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1;Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1" Q61245-2; Q61245; Q61246; B1AWB9; O88207-2; Q3TST6 "Isoform Short of Collagen alpha-1(XI) chain OS=Mus musculus OX=10090 GN=Col11a1; Collagen alpha-1(XI) chain OS=Mus musculus OX=10090 GN=Col11a1 PE=1 SV=2; Alpha 1 type XI collagen (Fragment) OS=Mus musculus OX=10090 GN=Col11a1 PE=2 SV=1; Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1; Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col11a1 PE=2 SV=1" 0 2 2 0.5741 0 1 1 1 641.36383 1281.72038 1281.72032 0.05 0.00003 0/0 0 0 19784602 HCD 30 MS2 36.6469 1274.8 110 56.8105 16073 16073 16071 QEplus033719.raw F4 1299 1085.4 1177.4 853.1 2104.8 1128.8 397 3.24 2 FALSE 0.000262 0.005313 0.494 -250 71280 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGESAWNLENR [R].hGESAWNLENR.[F] N-Term(TMT6plex) 1 Q3U7Z6 Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam1 PE=1 SV=1 Q3U7Z6 Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam1 PE=1 SV=1 0 3 3 0.8583 0 1 1 1 514.59418 1541.76798 1541.76582 1.4 0.00072 0/0 0 0 59401960 HCD 30 MS2 34.17302 409.5 21.099 56.815 16075 16075 16071 QEplus033719.raw F4 410.3 324.4 460.5 423.4 368.8 469.4 140 5.93 1 FALSE 1.14E-05 5.44E-09 1.667 -250 71322 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETIEQEK [K].eTIEQEk.[EQR] N-Term(TMT6plex); K7(TMT6plex) 6 P20065 Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x PE=1 SV=1 Q9D2R9; A2AEH9; P20065-2; P20065; A6H6H4; P21752 Thymosin beta OS=Mus musculus OX=10090 GN=Tmsb15a PE=2 SV=1; Thymosin beta 15a OS=Mus musculus OX=10090 GN=Tmsb15a PE=3 SV=1; Isoform Short of Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x; Thymosin beta-4 OS=Mus musculus OX=10090 GN=Tmsb4x PE=1 SV=1; Thymosin beta OS=Mus musculus OX=10090 GN=Tmsb10 PE=1 SV=1; SWISS-PROT:P21752 (Bos taurus) Thymosin beta-9 0 2 2 0.2165 0 1 1 1 667.88123 1334.75517 1334.75677 -1.19 -0.0008 0/0 0 0 10124105 HCD 30 MS2 16.57271 862.9 110 56.8367 16083 16083 16082 QEplus033719.raw F4 884.7 576.9 931.5 854 881.6 1048.8 491 2.54 1 TRUE 0.0006216 0.009214 0.418 -250 71328 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQPQFQQMR [R].nQPQFQQMR.[Q] N-Term(TMT6plex) 5 P54728 UV excision repair protein RAD23 homolog B OS=Mus musculus OX=10090 GN=Rad23b PE=1 SV=2 Q3TJ52; P54728; Q3U041; Q3UQN3; Q6NVC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rad23b PE=2 SV=1; UV excision repair protein RAD23 homolog B OS=Mus musculus OX=10090 GN=Rad23b PE=1 SV=2; UV excision repair protein RAD23 OS=Mus musculus OX=10090 GN=Rad23b PE=2 SV=1; UV excision repair protein RAD23 OS=Mus musculus OX=10090 GN=Rad23b PE=2 SV=1; UV excision repair protein RAD23 OS=Mus musculus OX=10090 GN=Rad23b PE=2 SV=1 0 2 2 0.657 0 1 1 1 703.36475 1405.72222 1405.72078 1.02 0.00072 0/0 0 0 12002307 HCD 30 MS2 20.88878 608.8 110 56.8392 16084 16084 16082 QEplus033719.raw F4 608.8 538.8 681.5 507.9 680.6 635.2 220 3.09 1 FALSE 1.14E-05 7.50E-05 0.881 -250 71338 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAEVLDSTK [R].rAEVLDSTk.[S] N-Term(TMT6plex); K9(TMT6plex) 1 Q9CR68 "Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrfs1 PE=1 SV=1" Q9CR68 "Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrfs1 PE=1 SV=1" 1 3 3 0.4119 0 1 1 1 492.96494 1476.88025 1476.87861 1.11 0.00055 0/0 0 0 36320560 HCD 30 MS2 21.54015 1081.1 43.527 56.8414 16085 16085 16082 QEplus033719.raw F4 1267 789.8 1137.9 1188.3 854.2 1249.3 422 4.54 1 FALSE 1.14E-05 2.89E-08 1.53 -250 71345 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATEEQLK [K].aTEEQLk.[T] N-Term(TMT6plex); K7(TMT6plex) 1 P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor 0 2 2 0.3827 0 1 1 1 638.88007 1276.75286 1276.75129 1.23 0.00078 0/0 0 0 24728918 HCD 30 MS2 25.14858 1467.3 110 56.844 16086 16086 16082 QEplus033719.raw F4 1611.1 443.4 630.6 362.1 5275.9 480.9 446 2.77 1 TRUE 0.0005848 0.008755 0.425 -250 71352 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQQQLTAMK [K].rQQQLTAMk.[V] N-Term(TMT6plex); K9(TMT6plex) 9 Q69ZX3; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; A0A2R8VHF9; A0A338P6K2; A2VCK0; O08638-2; O08638; Q8VDD5; A0A2R8VKI5; E9QPE7 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-9 (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2 1 2 2 0.6572 0 1 1 1 781.46729 1561.92729 1561.92485 1.56 0.00122 0/0 0 0 20569180 HCD 30 MS2 0 596.2 110 56.8465 16087 16087 16082 QEplus033719.raw F4 613.8 601 665.2 390.6 753.6 553 452 3.18 2 FALSE 1.14E-05 2.58E-05 0.969 -250 71355 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTDEAAFQK [K].rTDEAAFQk.[V] N-Term(TMT6plex); K9(TMT6plex) 2 A0A0G2JGD2 Protein S100-A4 (Fragment) OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1 A0A0G2JGD2; P07091 Protein S100-A4 (Fragment) OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1; Protein S100-A4 OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1 1 2 2 0.5513 0 1 1 1 762.43365 1523.86003 1523.85821 1.19 0.00091 0/0 0 0 19955126 HCD 30 MS2 13.36383 808.1 110 56.849 16088 16088 16082 QEplus033719.raw F4 840.5 854.1 839 449.5 1251.8 613.7 409 3.12 1 FALSE 5.44E-05 0.001741 0.612 -250 71363 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTDEAAFQK [K].rTDEAAFQk.[V] N-Term(TMT6plex); K9(TMT6plex) 2 A0A0G2JGD2 Protein S100-A4 (Fragment) OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1 A0A0G2JGD2; P07091 Protein S100-A4 (Fragment) OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1; Protein S100-A4 OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1 1 4 4 0.5935 0 1 1 1 381.72015 1523.85879 1523.85821 0.38 0.00014 0/0 0 0 16799444 HCD 30 MS2 17.47037 593.5 83.538 56.8513 16089 16089 16082 QEplus033719.raw F4 624.5 625.9 638.7 380.8 807.2 483.8 408 3.69 1 FALSE 4.43E-05 0.001539 0.623 -250 71379 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGYWGNK [R].rGYWGNk.[I] N-Term(TMT6plex); K7(TMT6plex) 10 Q3TXS9 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1 Q3TXS9; D3YVC1; Q3TLE5; Q3TI78; Q3TXR5; O89072; P25444; Q3TL20; D3YWJ3; Q3UB36 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 (Fragment) OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 (Fragment) OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=3; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1 1 3 3 0.4863 0 1 1 1 446.9281 1338.76975 1338.76828 1.1 0.00049 0/0 0 0 10477328 HCD 30 MS2 16.77565 1221.3 110 56.856 16091 16091 16082 QEplus033719.raw F4 1358.8 1038.9 1301.7 1015.8 1318.3 1294.2 371 2.92 1 FALSE 0.001886 0.03183 0.208 -250 71385 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TENCLSSCVDR [R].tENcLSScVDR.[F] N-Term(TMT6plex); C4(Carbamidomethyl); C8(Carbamidomethyl) 1 P62077 Mitochondrial import inner membrane translocase subunit Tim8 B OS=Mus musculus OX=10090 GN=Timm8b PE=1 SV=1 P62077 Mitochondrial import inner membrane translocase subunit Tim8 B OS=Mus musculus OX=10090 GN=Timm8b PE=1 SV=1 0 2 2 0.6626 0 1 1 1 785.36517 1569.72307 1569.71986 2.05 0.00161 0/0 0 0 9782067 HCD 30 MS2 17.89854 348.9 110 56.8586 16092 16092 16082 QEplus033719.raw F4 352 228.7 414.1 344.1 259.9 494.6 34 4.06 1 FALSE 1.14E-05 5.99E-09 1.659 -250 71393 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGESAWNLENR [R].hGESAWNLENR.[F] N-Term(TMT6plex) 1 Q3U7Z6 Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam1 PE=1 SV=1 Q3U7Z6 Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam1 PE=1 SV=1 0 2 2 0.8084 0 1 1 1 771.38684 1541.76641 1541.76582 0.38 0.00029 0/0 0 0 10062305 HCD 30 MS2 6.365959 439.3 110 56.8659 16094 16094 16093 QEplus033719.raw F4 500.5 371.9 437.6 432.3 556.6 336.7 129 4.07 1 FALSE 1.14E-05 1.01E-08 1.617 -250 71419 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDPYVK [RK].sDPYVk.[TSLI] N-Term(TMT6plex); K6(TMT6plex) 20 Q3U7R1 Extended synaptotagmin-1 OS=Mus musculus OX=10090 GN=Esyt1 PE=1 SV=2 Q99N50; Q99N80; Q3U7R1; A0A1W2P784; Q9CWV0; A2AE94; Q99N50-8; Q99N50-3; A0A5F8MPH5; A2AE95; Q6KAP5; Q99N50-6; A0A5F8MPI7; Q99N50-4; Q99N50-5; Q3U7R1-2; Q69ZF4; Q99N50-11; Q99N50-2; A0A5F8MPX2 Synaptotagmin-like protein 2 OS=Mus musculus OX=10090 GN=Sytl2 PE=1 SV=2; Synaptotagmin-like protein 1 OS=Mus musculus OX=10090 GN=Sytl1 PE=1 SV=2; Extended synaptotagmin-1 OS=Mus musculus OX=10090 GN=Esyt1 PE=1 SV=2; Extended synaptotagmin-1 (Fragment) OS=Mus musculus OX=10090 GN=Esyt1 PE=1 SV=1; Mitochondrial assembly of ribosomal large subunit protein 1 OS=Mus musculus OX=10090 GN=Malsu1 PE=1 SV=1; Synaptotagmin-like protein 1 OS=Mus musculus OX=10090 GN=Sytl1 PE=1 SV=1; Isoform 8 of Synaptotagmin-like protein 2 OS=Mus musculus OX=10090 GN=Sytl2; Isoform 3 of Synaptotagmin-like protein 2 OS=Mus musculus OX=10090 GN=Sytl2; Synaptotagmin-like protein 2 OS=Mus musculus OX=10090 GN=Sytl2 PE=1 SV=1; Synaptotagmin-like protein 1 OS=Mus musculus OX=10090 GN=Sytl1 PE=1 SV=1; MFLJ00227 protein (Fragment) OS=Mus musculus OX=10090 GN=Sytl1 PE=2 SV=1; Isoform 6 of Synaptotagmin-like protein 2 OS=Mus musculus OX=10090 GN=Sytl2; Synaptotagmin-like protein 2 OS=Mus musculus OX=10090 GN=Sytl2 PE=1 SV=1; Isoform 4 of Synaptotagmin-like protein 2 OS=Mus musculus OX=10090 GN=Sytl2; Isoform 5 of Synaptotagmin-like protein 2 OS=Mus musculus OX=10090 GN=Sytl2; Isoform 2 of Extended synaptotagmin-1 OS=Mus musculus OX=10090 GN=Esyt1; MKIAA1597 protein (Fragment) OS=Mus musculus OX=10090 GN=Sytl2 PE=2 SV=1; Isoform 11 of Synaptotagmin-like protein 2 OS=Mus musculus OX=10090 GN=Sytl2; Isoform 2 of Synaptotagmin-like protein 2 OS=Mus musculus OX=10090 GN=Sytl2; Synaptotagmin-like protein 2 OS=Mus musculus OX=10090 GN=Sytl2 PE=1 SV=1 0 2 2 0.5644 0 1 1 1 583.84564 1166.68401 1166.68215 1.6 0.00093 0/0 0 0 38893832 HCD 30 MS2 24.22625 899.3 33.179 56.8729 16097 16097 16093 QEplus033719.raw F4 907.7 736.5 906.9 769.2 1213.8 861.8 297 2.02 1 FALSE 0.004222 0.07731 0.069 -250 71429 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVHPDTGISSK [K].qVHPDTGISSk.[A] N-Term(TMT6plex); K11(TMT6plex) 18 Q64475; Q64525 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3;Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64475; Q8CGP2; Q64525; Q64524; Q8CGP1; P10854; A0JNS9; Q64478; P70696; Q9D2U9; Q8CGP2-2; Q8CBB6; Q6ZWY9; Q8CGP0; Q8VEE3; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 2-E OS=Mus musculus OX=10090 GN=H2bc21 PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Histone H2B type 3-A OS=Mus musculus OX=10090 GN=Hist3h2ba PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3; Histone H2B type 3-B OS=Mus musculus OX=10090 GN=H2bu1 PE=1 SV=3; Hist2h2bb protein OS=Mus musculus OX=10090 GN=Hist2h2bb PE=2 SV=1; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 0 3 3 0.7213 0 1 1 1 542.97998 1626.92539 1626.92154 2.36 0.00128 0/0 0 0 30072838 HCD 30 MS2 15.25924 727.6 35.982 56.8752 16098 16098 16093 QEplus033719.raw F4 939.8 797.7 676.6 559.9 950.4 440.9 405 4.27 2 FALSE 1.14E-05 2.17E-06 1.174 -250 71435 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTPGESGAAGPSGPIGSR [R].gTPGESGAAGPSGPIGSR.[G] N-Term(TMT6plex) 4 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 3 3 0.7701 0 1 1 1 595.31024 1783.91617 1783.91361 1.44 0.00086 0/0 0 0 34311284 HCD 30 MS2 42.38756 593.6 45.845 56.8774 16099 16099 16093 QEplus033719.raw F4 574 511.6 638.6 517.2 725 595.1 265 5.61 1 FALSE 1.14E-05 8.99E-14 2.575 -250 71524 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AELSEGK [R].aELSEGk.[C] N-Term(TMT6plex); K7(TMT6plex) 11 G5E8R1 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 E9Q455; G5E8R1; Q8BSH3; E9Q452; F8WID5; E9Q454; G5E8R0; Q564G1; B7ZNL3; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 0 2 2 0.1347 0 1 1 1 596.35199 1191.6967 1191.69852 -1.53 -0.00091 0/0 0 0 25334232 HCD 30 MS2 48.5536 1454.1 44.674 56.908 16111 16111 16104 QEplus033719.raw F4 1592.9 1097.9 1495.5 1365.1 1772.5 1400.8 374 2.45 1 FALSE 0.0007056 0.01022 0.401 -250 71532 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGAEVVK [K].aGAEVVk.[Q] N-Term(TMT6plex); K7(TMT6plex) 2 Q91WQ3 "Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3" Q91WQ3; A2A7S7 "Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3; Tyrosine--tRNA ligase OS=Mus musculus OX=10090 GN=Yars PE=1 SV=1" 0 2 2 0.252 0 1 1 1 566.36151 1131.71575 1131.71378 1.74 0.00098 0/0 0 0 18955600 HCD 30 MS2 38.24122 1461.1 77.147 56.9103 16112 16112 16104 QEplus033719.raw F4 1668.1 1151.7 1497.2 1407.6 1659.1 1383.2 424 2.46 1 FALSE 0.0002909 0.005985 0.479 -250 71550 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAEVLDSTK [R].rAEVLDSTk.[S] N-Term(TMT6plex); K9(TMT6plex) 1 Q9CR68 "Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrfs1 PE=1 SV=1" Q9CR68 "Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrfs1 PE=1 SV=1" 1 2 2 0.3361 0 1 1 1 738.94397 1476.88066 1476.87861 1.39 0.00102 0/0 0 0 7512793.5 HCD 30 MS2 31.23343 399.6 110 56.9151 16114 16114 16104 QEplus033719.raw F4 358.6 330.2 442.4 403.2 402.8 460.4 421 2.38 1 FALSE 1.14E-05 1.32E-05 1.024 -250 71559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQQEDFK [K].eQQEDFk.[E] N-Term(TMT6plex); K7(TMT6plex) 2 Q545T7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Myl1 PE=2 SV=1 E0CZ30; Q545T7 "Myosin light chain 1/3, skeletal muscle isoform (Fragment) OS=Mus musculus OX=10090 GN=Myl1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myl1 PE=2 SV=1" 0 2 2 0.5976 0 1 1 1 691.37158 1381.73589 1381.73637 -0.35 -0.00024 0/0 0 0 4617955.5 HCD 30 MS2 0 478.4 110 56.9224 16116 16116 16115 QEplus033719.raw F4 543.2 188.5 369.8 792 281.6 695.2 242 2.51 1 FALSE 0.002024 0.03538 0.192 -250 71598 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVVVVR [R].kVVVVR.[C] N-Term(TMT6plex); K1(TMT6plex) 10 A0A1B0GS68 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Gm45713 PE=2 SV=1 A0A1B0GS68; A0A1B0GRH1; Q3TDS9; A0A1B0GSC2; A0A1B0GSL5; P19253; A0A1B0GSJ2; A0A1B0GT00; A0A1B0GSQ6; A0A1B0GSB2 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Gm45713 PE=2 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=2 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=4; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1 1 3 3 0.2541 0 1 1 1 386.60971 1157.81458 1157.81343 0.99 0.00038 0/0 0 0 21601780 HCD 30 MS2 20.63668 1004.4 60.711 56.9362 16122 16122 16115 QEplus033719.raw F4 1097.2 930.5 1051.2 892.8 1054 1000.9 80 2.44 1 FALSE 0.004022 0.07438 0.076 -250 71608 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDNNWGK [K].qDNNWGk.[E] N-Term(TMT6plex); K7(TMT6plex) 4 Q3V471 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1 Q3V471; Q61357; P16110; Q8C253 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1; Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1; Galectin-3 OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=3; Galectin OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=1 0 2 2 0.533 0 1 1 1 660.35883 1319.71037 1319.71082 -0.34 -0.00022 0/0 0 0 19550330 HCD 30 MS2 49.79899 1066.8 64.412 56.9384 16123 16123 16115 QEplus033719.raw F4 1152.4 939.5 1096.6 899.1 1221.1 1091.9 339 2.12 1 FALSE 0.001972 0.03405 0.198 -250 71625 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THMQDLK [R].tHMQDLk.[D] N-Term(TMT6plex); K7(TMT6plex) 13 E9Q1G8 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2 E9Q1G8; Q8C2A3; P28661-3; Q8C752; E9Q9F5; Q5DTS3; Q3UNN1; O55131; A0A5F8MP96; P28661-4; P28661-2; P28661; P28661-5 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Isoform 3 of Septin-4 OS=Mus musculus OX=10090 GN=Septin4; Septin-type G domain-containing protein OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin-7 (Fragment) OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin-7 OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=1; Septin-4 OS=Mus musculus OX=10090 GN=Septin4 PE=1 SV=1; Isoform 4 of Septin-4 OS=Mus musculus OX=10090 GN=Septin4; Isoform 2 of Septin-4 OS=Mus musculus OX=10090 GN=Septin4; Septin-4 OS=Mus musculus OX=10090 GN=Septin4 PE=1 SV=1; Isoform 5 of Septin-4 OS=Mus musculus OX=10090 GN=Septin4 0 2 2 0.4395 0 1 1 1 665.8819 1330.75652 1330.75533 0.89 0.00059 0/0 0 0 13129740 HCD 30 MS2 27.37756 853.4 110 56.9432 16125 16125 16115 QEplus033719.raw F4 838.6 749.2 955.3 699.6 963.9 913.7 353 3.14 1 FALSE 0.0001504 0.003273 0.549 -250 71634 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATEEQLK [K].aTEEQLk.[T] N-Term(TMT6plex); K7(TMT6plex) 1 P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor 0 3 3 0.3943 0 1 1 1 426.25574 1276.75266 1276.75129 1.07 0.00046 0/0 0 0 12143548 HCD 30 MS2 20.64531 858.5 110 56.9505 16127 16127 16126 QEplus033719.raw F4 988.7 376.6 585.2 549 2000 651.2 446 2.46 1 TRUE 0.002173 0.0413 0.17 -250 71642 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQAADQITK [K].nQAADQITk.[L] N-Term(TMT6plex); K9(TMT6plex) 3 C6EQH3 "Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Suclg2 PE=2 SV=1" Q9Z2I8-2; C6EQH3; Q9Z2I8 "Isoform 2 of Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Suclg2; Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Suclg2 PE=2 SV=1; Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Suclg2 PE=1 SV=3" 0 2 2 0.6452 0 1 1 1 723.9212 1446.83513 1446.83166 2.4 0.00173 0/0 0 0 10179097 HCD 30 MS2 0 627.3 110 56.953 16128 16128 16126 QEplus033719.raw F4 581 523.5 712.6 658.7 540.9 746.9 450 4.34 1 FALSE 1.14E-05 4.31E-07 1.307 -250 71650 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLASSVLR [K].rLASSVLR.[C] N-Term(TMT6plex) 2 Q5I0T8 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 Q5I0T8; A2A547 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1; Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 1 3 3 0.3979 0 1 1 1 377.57892 1130.7222 1130.72071 1.32 0.0005 0/0 0 0 58195688 HCD 30 MS2 13.09889 293 19.931 56.9553 16129 16129 16126 QEplus033719.raw F4 324.9 229.2 332.9 243.7 321.4 306.1 198 3.77 1 FALSE 0.0002719 0.005457 0.491 -250 71657 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTTVTGLGR [K].dTTVTGLGR.[G] N-Term(TMT6plex) 2 Q8BMS1 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1" Q8BMS1; Q3TB39 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1; 3HCDH_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hadha PE=2 SV=1" 0 2 2 0.3552 0 1 1 1 574.82788 1148.64849 1148.64727 1.06 0.00061 0/0 0 0 47329652 HCD 30 MS2 41.8991 707.6 20.497 56.9576 16130 16130 16126 QEplus033719.raw F4 784 501.3 752.2 694 751.2 763.1 309 2.59 1 FALSE 0.000108 0.003101 0.555 -250 71674 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHQALK [RK].iHQALk.[GE] N-Term(TMT6plex); K6(TMT6plex) 5 Q9D5V5 Cullin-5 OS=Mus musculus OX=10090 GN=Cul5 PE=1 SV=3 Q9D5V5; Q05CY9; G3X914; E9PV12; Q78GU9 Cullin-5 OS=Mus musculus OX=10090 GN=Cul5 PE=1 SV=3; Cul5 protein (Fragment) OS=Mus musculus OX=10090 GN=Cul5 PE=2 SV=1; Cullin-5 OS=Mus musculus OX=10090 GN=Cul5 PE=1 SV=1; Cullin-5 OS=Mus musculus OX=10090 GN=Cul5 PE=1 SV=1; Cul5 protein OS=Mus musculus OX=10090 GN=Cul5 PE=2 SV=1 0 3 3 0.395 0 1 1 1 389.92551 1167.76197 1167.7614 0.49 0.00019 0/0 0 0 31776634 HCD 30 MS2 56.60118 500.5 30.371 56.9621 16132 16132 16126 QEplus033719.raw F4 542.3 379.6 533.6 494.4 603.2 449.9 71 2.81 2 FALSE 0.002148 0.04064 0.172 -250 71675 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LHQALK [RK].lHQALk.[GE] N-Term(TMT6plex); K6(TMT6plex) 5 O35639 Annexin A3 OS=Mus musculus OX=10090 GN=Anxa3 PE=1 SV=4 O35639; Q8C1X9; Q3TLP4; Q3TFK4; Q3U737 Annexin A3 OS=Mus musculus OX=10090 GN=Anxa3 PE=1 SV=4; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1 0 3 3 0.395 0 1 2 2 389.92551 1167.76197 1167.7614 0.49 0.00019 0/0 0 0 31776634 HCD 30 MS2 56.60118 500.5 30.371 56.9621 16132 16132 16126 QEplus033719.raw F4 542.3 379.6 533.6 494.4 603.2 449.9 71 2.81 1 FALSE 0.002148 0.04064 0.172 -250 71684 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVVGDGR [R].lVVGDGR.[M] N-Term(TMT6plex) 7 E0CYV0 Protein-L-isoaspartate O-methyltransferase OS=Mus musculus OX=10090 GN=Pcmt1 PE=1 SV=1 P23506-2; E0CYV0; F6V9F1; E9PWE0; F7D432; Q545L9; Q8BPI6 Isoform 2 of Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Mus musculus OX=10090 GN=Pcmt1; Protein-L-isoaspartate O-methyltransferase OS=Mus musculus OX=10090 GN=Pcmt1 PE=1 SV=1; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Pcmt1 PE=1 SV=1; Protein-L-isoaspartate O-methyltransferase OS=Mus musculus OX=10090 GN=Pcmt1 PE=1 SV=1; Protein-L-isoaspartate O-methyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Pcmt1 PE=1 SV=1; Protein-L-isoaspartate O-methyltransferase OS=Mus musculus OX=10090 GN=Pcmt1 PE=2 SV=1; Protein-L-isoaspartate O-methyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Pcmt1 PE=2 SV=1 0 2 2 0.0586 0 1 1 1 472.79074 944.57421 944.57265 1.65 0.00078 0/0 0 0 25119522 HCD 30 MS2 45.77751 786.1 37.802 56.9643 16133 16133 16126 QEplus033719.raw F4 756.2 669.5 876.4 640 841.3 933.1 249 2.39 1 FALSE 0.00079 0.01107 0.387 -250 71693 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LIETGER [K].lIETGER.[E] N-Term(TMT6plex) 6 Q9JIX0 Transcription and mRNA export factor ENY2 OS=Mus musculus OX=10090 GN=Eny2 PE=1 SV=1 A0A2I3BRR5; A0A2I3BQK0; A0A2I3BQ37; A0A2I3BQB4; Q9JIX0; A0A2I3BRK6 Transcription and mRNA export factor ENY2 OS=Mus musculus OX=10090 GN=Eny2 PE=1 SV=1; Transcription and mRNA export factor ENY2 OS=Mus musculus OX=10090 GN=Eny2 PE=1 SV=1; Transcription and mRNA export factor ENY2 OS=Mus musculus OX=10090 GN=Eny2 PE=1 SV=1; Transcription and mRNA export factor ENY2 OS=Mus musculus OX=10090 GN=Eny2 PE=1 SV=1; Transcription and mRNA export factor ENY2 OS=Mus musculus OX=10090 GN=Eny2 PE=1 SV=1; Transcription and mRNA export factor ENY2 OS=Mus musculus OX=10090 GN=Eny2 PE=1 SV=1 0 2 2 0.2903 0 1 1 1 523.8056 1046.60393 1046.60434 -0.39 -0.00021 0/0 0 0 21383552 HCD 30 MS2 53.27676 863.1 39.442 56.9666 16134 16134 16126 QEplus033719.raw F4 879.2 758.2 935.7 660.1 1087 858.3 242 2.48 1 FALSE 0.0002019 0.004241 0.521 -250 71703 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVLGQLHGGPSSCSATGTNR [K].rVLGQLHGGPSScSATGTNR.[S] N-Term(TMT6plex); C13(Carbamidomethyl) 1 P15636 SWISS-PROT:P15636 Protease I precursor Lysyl endopeptidase Achromobacter lyticus. P15636 SWISS-PROT:P15636 Protease I precursor Lysyl endopeptidase Achromobacter lyticus. 1 4 4 0.8173 0 1 1 1 571.80029 2284.17934 2284.17778 0.69 0.00039 0/0 0 0 12631936 HCD 30 MS2 5.979486 345.1 110 56.9691 16135 16135 16126 QEplus033719.raw F4 424.5 266.8 336.7 311.1 398.6 333.1 324 8.21 1 TRUE 1.14E-05 3.77E-14 2.647 -250 71712 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AFGQAK [K].aFGQAk.[H] N-Term(TMT6plex); K6(TMT6plex) 1 P40142 Transketolase OS=Mus musculus OX=10090 GN=Tkt PE=1 SV=1 P40142 Transketolase OS=Mus musculus OX=10090 GN=Tkt PE=1 SV=1 0 2 2 0.6468 0 1 1 1 540.33606 1079.66484 1079.66135 3.23 0.00175 0/0 0 0 17469378 HCD 30 MS2 45.97821 1468.7 83.26 56.9714 16136 16136 16126 QEplus033719.raw F4 1519.5 1193.2 1670.9 1275.7 1571.3 1581.6 50 2.01 1 FALSE 0.006003 0.0991 0.009 -250 71721 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VFTESEER [R].vFTESEER.[T] N-Term(TMT6plex) 1 P27612 Phospholipase A-2-activating protein OS=Mus musculus OX=10090 GN=Plaa PE=1 SV=4 P27612 Phospholipase A-2-activating protein OS=Mus musculus OX=10090 GN=Plaa PE=1 SV=4 0 2 2 0.5903 0 1 1 1 613.31641 1225.62554 1225.6262 -0.54 -0.00033 0/0 0 0 18869118 HCD 30 MS2 17.17433 847.8 110 56.9787 16138 16138 16137 QEplus033719.raw F4 889.3 695.7 890.9 805.3 887.8 917.5 141 3.49 1 FALSE 1.14E-05 0.0001091 0.85 -250 71728 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVHPDTGISSK [K].qVHPDTGISSk.[A] N-Term(TMT6plex); K11(TMT6plex) 18 Q64475; Q64525 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3;Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64475; Q8CGP2; Q64525; Q64524; Q8CGP1; P10854; A0JNS9; Q64478; P70696; Q9D2U9; Q8CGP2-2; Q8CBB6; Q6ZWY9; Q8CGP0; Q8VEE3; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 2-E OS=Mus musculus OX=10090 GN=H2bc21 PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Histone H2B type 3-A OS=Mus musculus OX=10090 GN=Hist3h2ba PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3; Histone H2B type 3-B OS=Mus musculus OX=10090 GN=H2bu1 PE=1 SV=3; Hist2h2bb protein OS=Mus musculus OX=10090 GN=Hist2h2bb PE=2 SV=1; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 0 2 2 0.6459 0 1 1 1 813.9657 1626.92412 1626.92154 1.59 0.00129 0/0 0 0 14131160 HCD 30 MS2 18.95177 553.8 110 56.9812 16139 16139 16137 QEplus033719.raw F4 661.1 639.9 470.5 539 760.8 251.4 403 3.7 2 FALSE 1.14E-05 1.00E-09 1.807 -250 71748 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSMNILNR [K].hSMNILNR.[I] N-Term(TMT6plex) 3 Q8BZY3; Q61655 RNA helicase OS=Mus musculus OX=10090 GN=Ddx19b PE=1 SV=1;ATP-dependent RNA helicase DDX19A OS=Mus musculus OX=10090 GN=Ddx19a PE=1 SV=2 Q8BZY3; Q8R3C7; Q61655 RNA helicase OS=Mus musculus OX=10090 GN=Ddx19b PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx19b PE=1 SV=1; ATP-dependent RNA helicase DDX19A OS=Mus musculus OX=10090 GN=Ddx19a PE=1 SV=2 0 3 3 0.5776 0 1 1 1 405.22736 1213.66751 1213.66729 0.18 0.00007 0/0 0 0 19226228 HCD 30 MS2 34.0018 449 45.611 56.988 16142 16142 16137 QEplus033719.raw F4 528.8 302.8 455.1 314.2 494.4 598.9 218 3.93 2 FALSE 1.14E-05 0.0006342 0.702 -250 71757 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQNTDMVQK [R].sQNTDMVQk.[S] N-Term(TMT6plex); K9(TMT6plex) 5 Q5SUH7 Clathrin interactor 1 OS=Mus musculus OX=10090 GN=Clint1 PE=1 SV=1 Q5SUH7; Q3UGL3; Q99KN9; Q3TJF5; Q3UPG6 Clathrin interactor 1 OS=Mus musculus OX=10090 GN=Clint1 PE=1 SV=1; ENTH domain-containing protein OS=Mus musculus OX=10090 GN=Clint1 PE=2 SV=1; Clathrin interactor 1 OS=Mus musculus OX=10090 GN=Clint1 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Clint1 PE=2 SV=1; ENTH domain-containing protein OS=Mus musculus OX=10090 GN=Clint1 PE=2 SV=1 0 2 2 0.6641 0 1 1 1 754.91119 1508.81511 1508.8143 0.54 0.00041 0/0 0 0 5673262.5 HCD 30 MS2 0 348.1 110 56.993 16144 16144 16137 QEplus033719.raw F4 381 304.5 373 264.6 422.2 343.3 344 3.84 1 FALSE 1.14E-05 2.38E-06 1.166 -250 71764 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADEVAPAK [R].aDEVAPAk.[K] N-Term(TMT6plex); K8(TMT6plex) 5 Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1;ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TS02; Q3TED3; Q3UEA1; Q3V117; Q91V92 ATP citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate (pro-S-)-lyase (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 0 2 2 0.5476 0 1 1 1 629.875 1258.74272 1258.74072 1.59 0.001 0/0 0 0 10700606 HCD 30 MS2 11.95047 912 110 56.9955 16145 16145 16137 QEplus033719.raw F4 916 857.9 946.7 749.2 1122.1 880.1 359 2.94 2 FALSE 1.14E-05 0.0002053 0.797 -250 71772 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CASQVGMTAPGTR [K].cASQVGMTAPGTR.[R] N-Term(TMT6plex); C1(Carbamidomethyl) 3 Q543F3 Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1 Q922F8; Q543F3; D3Z7R6 Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1 0 2 2 0.6953 0 1 1 1 782.89185 1564.77641 1564.77731 -0.57 -0.00045 0/0 0 0 10505113 HCD 30 MS2 54.17175 569 110 56.9981 16146 16146 16137 QEplus033719.raw F4 533.8 561.7 610.7 346 826.8 535.3 146 4.3 1 FALSE 1.14E-05 1.01E-08 1.617 -250 71784 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIETTDVTR [R].aIETTDVTR.[S] N-Term(TMT6plex) 4 A0A1L1SV73 Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus OX=10090 GN=Usp47 PE=1 SV=1 Q8BY87-2; Q3UB96; A0A1L1SV73; Q8BY87 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus OX=10090 GN=Usp47; Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Mus musculus OX=10090 GN=Usp47 PE=2 SV=1; Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus OX=10090 GN=Usp47 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus OX=10090 GN=Usp47 PE=1 SV=2 0 2 2 0.5223 0 1 1 1 617.84686 1234.68645 1234.68405 1.95 0.0012 0/0 0 0 8924142 HCD 30 MS2 18.16485 872.2 110 57.0104 16150 16150 16148 QEplus033719.raw F4 910.6 663.9 859.2 912.8 933.3 953.2 327 2.91 1 FALSE 1.14E-05 6.77E-05 0.889 -250 71809 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GKLDDYQER [K].gkLDDYQER.[M] N-Term(TMT6plex); K2(TMT6plex) 2 Q60865 Caprin-1 OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=2 Q3UFZ6; Q60865 Caprin-1_dimer domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Caprin1 PE=2 SV=1; Caprin-1 OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=2 1 3 3 0.4968 0 1 1 1 527.95966 1581.86441 1581.86369 0.46 0.00024 0/0 0 0 24675512 HCD 30 MS2 4.027462 1419.2 90.032 57.0172 16153 16153 16148 QEplus033719.raw F4 1324.4 1405.5 1634.5 956.9 1772.2 1421.7 391 3.12 1 FALSE 1.14E-05 0.0005867 0.709 -250 71817 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVIQSK [K].sVIQSk.[D] N-Term(TMT6plex); K6(TMT6plex) 4 P13542 Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q1WNQ0; Q8BGE8; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Perinatal myosin heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.2511 0 1 1 1 560.36121 1119.71514 1119.71378 1.21 0.00068 0/0 0 0 18733658 HCD 30 MS2 27.30141 990.2 83.615 57.0194 16154 16154 16148 QEplus033719.raw F4 1201.7 370.4 703.4 1735.5 573.4 1356.9 173 2.35 1 FALSE 0.00403 0.07467 0.075 -250 71827 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YIHSANVLHR [K].yIHSANVLHR.[D] N-Term(TMT6plex) 15 Q3UF82; Q63844 Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk1 PE=2 SV=1;Mitogen-activated protein kinase 3 OS=Mus musculus OX=10090 GN=Mapk3 PE=1 SV=5 A0A0U1RPZ0; Q61532; Q6P5G0; Q3UF82; Q63844; D3Z6D8; E9Q3I6; Q8BV72; Q8C8P0; D3Z3G6; Q3U2H3; P63085; E9PXX5; O35558; A0A0U1RPX4 Mitogen-activated protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Mapk3 PE=1 SV=1; Mitogen-activated protein kinase 6 OS=Mus musculus OX=10090 GN=Mapk6 PE=1 SV=3; Mitogen-activated protein kinase 4 OS=Mus musculus OX=10090 GN=Mapk4 PE=1 SV=1; Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk1 PE=2 SV=1; Mitogen-activated protein kinase 3 OS=Mus musculus OX=10090 GN=Mapk3 PE=1 SV=5; Mitogen-activated protein kinase 3 OS=Mus musculus OX=10090 GN=Mapk3 PE=1 SV=1; Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk4 PE=1 SV=1; Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk4 PE=2 SV=1; Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk6 PE=2 SV=1; Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk3 PE=1 SV=1; Mitogen-activated protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Mapk3 PE=2 SV=1; Mitogen-activated protein kinase 1 OS=Mus musculus OX=10090 GN=Mapk1 PE=1 SV=3; Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Mapk4 PE=1 SV=1; Mitogen-activated protein kinase OS=Mus musculus OX=10090 GN=Erk2 PE=3 SV=1; Mitogen-activated protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Mapk3 PE=1 SV=1 0 4 4 0.6231 0 1 1 1 360.45844 1438.81191 1438.81165 0.18 0.00007 0/0 0 0 11352350 HCD 30 MS2 22.0245 425.7 110 57.0219 16155 16155 16148 QEplus033719.raw F4 477.6 312.7 486.7 348.7 423 505.6 375 4.67 2 FALSE 1.14E-05 2.37E-07 1.356 -250 71833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AADPPAENSSAPEAEQGGAE [K].aADPPAENSSAPEAEQGGAE.[-] N-Term(TMT6plex) 6 Q810K5 Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 A2BGG7; Q810K5; Q8BRJ5; P62960; Q71V06; Q60951 Y-box-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=1; Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Y-box-binding protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=3; Y box transcription factor (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1b OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 0 3 3 0.9071 0 1 1 1 709.66046 2126.96683 2126.96755 -0.34 -0.00024 0/0 0 0 8845777 HCD 30 MS2 0 119.7 110 57.0244 16156 16156 16148 QEplus033719.raw F4 119.9 103.1 127.9 93.9 146.7 126.9 49 4.52 1 FALSE 1.14E-05 4.78E-10 1.868 -250 71846 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGQGAFGNMCR [R].sGQGAFGNMcR.[G] N-Term(TMT6plex); C10(Carbamidomethyl) 1 Q9D8E6 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3 Q9D8E6 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3 0 2 2 0.7619 0 1 1 1 707.33252 1413.65776 1413.65647 0.91 0.00065 0/0 0 0 4735846.5 HCD 30 MS2 0 258.2 110 57.0294 16158 16158 16148 QEplus033719.raw F4 354.4 199.6 263.4 186.6 280.2 264.7 51 4.2 1 FALSE 1.14E-05 2.24E-07 1.361 -250 71854 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELSDIAHR [K].eLSDIAHR.[I] N-Term(TMT6plex) 10 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 A0A0U1RPT5; Q9CPQ9; D3YWI1; A0A0U1RPN8; D3YV98; A6ZI46; D3Z510; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=2; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 0 3 3 0.4286 0 1 1 1 390.55441 1169.64869 1169.6476 0.93 0.00036 0/0 0 0 16485029 HCD 30 MS2 58.64865 565.9 50.22 57.0367 16160 16160 16159 QEplus033719.raw F4 656.7 408.8 568.8 629.3 646.9 484.6 214 3.43 1 FALSE 1.14E-05 8.19E-06 1.064 -250 71861 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQHSFELEER [K].eQHSFELEER.[A] N-Term(TMT6plex) 6 Q91YH5 Atlastin-3 OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1 A0A494BAU1; A0A494BAX8; Q91YH5; A0A494B9P1; A0A494BAW9; E9PYT3 Atlastin-3 OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1; Atlastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1; Atlastin-3 OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1; Atlastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1; Atlastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1; Atlastin-3 OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1 0 3 3 0.6627 0 1 1 1 511.58945 1532.75379 1532.75425 -0.3 -0.00015 0/0 0 0 14735806 HCD 30 MS2 41.79581 1153.7 110 57.0392 16161 16161 16159 QEplus033719.raw F4 1399.8 874.2 1130.6 880.9 1488.4 1148.4 133 4.15 1 FALSE 1.14E-05 0.0009351 0.668 -250 71888 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVHPDTGISSK [K].qVHPDTGISSk.[A] N-Term(TMT6plex); K11(TMT6plex) 18 Q64475; Q64525 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3;Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64475; Q8CGP2; Q64525; Q64524; Q8CGP1; P10854; A0JNS9; Q64478; P70696; Q9D2U9; Q8CGP2-2; Q8CBB6; Q6ZWY9; Q8CGP0; Q8VEE3; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 2-E OS=Mus musculus OX=10090 GN=H2bc21 PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Histone H2B type 3-A OS=Mus musculus OX=10090 GN=Hist3h2ba PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3; Histone H2B type 3-B OS=Mus musculus OX=10090 GN=H2bu1 PE=1 SV=3; Hist2h2bb protein OS=Mus musculus OX=10090 GN=Hist2h2bb PE=2 SV=1; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 0 4 4 0.584 0 1 1 1 407.48633 1626.92348 1626.92154 1.19 0.00049 0/0 0 0 26495458 HCD 30 MS2 28.2793 649.3 51.699 57.0482 16165 16165 16159 QEplus033719.raw F4 732.9 674.6 612.9 438 937.4 500 403 3.75 2 FALSE 4.43E-05 0.001522 0.624 -250 71892 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YAHVVLR [R].yAHVVLR.[K] N-Term(TMT6plex) 5 Q561N5 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1 S4R1N6; Q561N5; Q3TW65; F6YVP7; A0A1Y7VKY1 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=3 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps6 PE=3 SV=2; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps5 PE=3 SV=1 0 3 3 0.6269 0 1 1 1 362.89246 1086.66281 1086.66213 0.63 0.00023 0/0 0 0 13129736 HCD 30 MS2 10.76387 264.8 71.512 57.0505 16166 16166 16159 QEplus033719.raw F4 287.2 194 292.6 197.3 261.6 356.1 306 3.27 1 FALSE 0.0002218 0.004548 0.512 -250 71899 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVQQHVLK [R].gVQQHVLk.[K] N-Term(TMT6plex); K8(TMT6plex) 5 E9PYG6 RAS p21 protein activator 1 OS=Mus musculus OX=10090 GN=Rasa1 PE=1 SV=1 Q3TTA2; A0A286YDU0; E9PYG6; Q91YX7; Q3V090 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rasa1 PE=2 SV=1; RAS p21 protein activator 1 (Fragment) OS=Mus musculus OX=10090 GN=Rasa1 PE=1 SV=1; RAS p21 protein activator 1 OS=Mus musculus OX=10090 GN=Rasa1 PE=1 SV=1; RAS p21 protein activator 1 OS=Mus musculus OX=10090 GN=Rasa1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rasa1 PE=2 SV=1 0 3 3 0.2286 0 1 1 1 456.29129 1366.85932 1366.85709 1.63 0.00074 0/0 0 0 13107835 HCD 30 MS2 77.42067 995.5 77.393 57.0527 16167 16167 16159 QEplus033719.raw F4 1267.8 802 1042.1 721.1 994.9 1145.3 182 2.8 1 FALSE 0.0003113 0.006161 0.475 -250 71907 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQCITAMK [K].hQcITAMk.[E] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 10 Q6PFD9 Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=2 A0A140T8J8; Q3TP40; A0A1B0GRB5; Q3TPG3; B7ZN81; B2RQL0; Q6PFD9; A0A1B0GSX7; A0A1B0GRA7; Q3UJE5 Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1; Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Peptidase S59 domain-containing protein OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1; Nup98 protein OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1; Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=2; Nuclear pore complex protein Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Peptidase S59 domain-containing protein OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1 0 3 3 0.365 0 1 1 1 482.93488 1446.79007 1446.79615 -4.2 -0.00202 0/0 0 0 10279251 HCD 30 MS2 37.54467 933.5 110 57.0552 16168 16168 16159 QEplus033719.raw F4 957.9 814.1 1025 763.4 1078 962.3 344 3.37 1 FALSE 0.0005556 0.008518 0.43 -250 71916 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NGGVGIK [K].nGGVGIk.[V] N-Term(TMT6plex); K7(TMT6plex) 5 Q61699 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2 D3Z3I9; E9Q0U7; Q61699; Q61699-2; A0A0J9YTZ7 Heat shock protein 105 kDa (Fragment) OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=1; Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=1; Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2; Isoform HSP105-beta of Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1; Heat shock protein 105 kDa (Fragment) OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=1 0 2 2 0.1349 0 1 1 1 551.85358 1102.69988 1102.69846 1.28 0.00071 0/0 0 0 18100338 HCD 30 MS2 41.96573 1387.2 110 57.0577 16169 16169 16159 QEplus033719.raw F4 2464.4 719.5 1099.6 1163.2 1878.7 998.1 106 2.15 1 FALSE 0.0008268 0.01138 0.383 -250 71926 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VPSPPPGHK [K].vPSPPPGHk.[W] N-Term(TMT6plex); K9(TMT6plex) 1 Q04750 DNA topoisomerase 1 OS=Mus musculus OX=10090 GN=Top1 PE=1 SV=2 Q04750 DNA topoisomerase 1 OS=Mus musculus OX=10090 GN=Top1 PE=1 SV=2 0 3 3 0.602 0 1 1 1 458.6156 1373.83225 1373.83054 1.24 0.00057 0/0 0 0 7359378.5 HCD 30 MS2 63.23573 664.1 110 57.065 16171 16171 16170 QEplus033719.raw F4 797.6 556.8 697.7 599.5 692 640.9 418 2.99 1 FALSE 1.14E-05 7.95E-07 1.256 -250 71936 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VKAEGPGLSR [K].vkAEGPGLSR.[T] N-Term(TMT6plex); K2(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 1 3 3 0.6634 0 1 1 1 491.30545 1471.9018 1471.89968 1.44 0.0007 0/0 0 0 48979028 HCD 30 MS2 34.98391 1033 37.974 57.0698 16173 16173 16170 QEplus033719.raw F4 1128.6 676 1282 1235 653.7 1222.6 319 3.03 1 FALSE 1.14E-05 1.18E-05 1.034 -250 71943 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YDPEPK [R].yDPEPk.[S] N-Term(TMT6plex); K6(TMT6plex) 5 Q5SUH7 Clathrin interactor 1 OS=Mus musculus OX=10090 GN=Clint1 PE=1 SV=1 Q5SUH7; Q99KN9; Q5SUH6; Q99KN9-2; Q3UPG6 Clathrin interactor 1 OS=Mus musculus OX=10090 GN=Clint1 PE=1 SV=1; Clathrin interactor 1 OS=Mus musculus OX=10090 GN=Clint1 PE=1 SV=2; Clathrin interactor 1 OS=Mus musculus OX=10090 GN=Clint1 PE=1 SV=1; Isoform 2 of Clathrin interactor 1 OS=Mus musculus OX=10090 GN=Clint1; ENTH domain-containing protein OS=Mus musculus OX=10090 GN=Clint1 PE=2 SV=1 0 2 2 0.5189 0 1 1 1 603.84247 1206.67766 1206.67706 0.5 0.0003 0/0 0 0 11005410 HCD 30 MS2 16.50552 1370.2 110 57.0746 16175 16175 16170 QEplus033719.raw F4 1534.6 1068.1 1464 1244.9 1514.5 1395 400 2.12 1 FALSE 0.005324 0.09086 0.032 -250 71984 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TCVDINECR [R].tcVDINEcR.[R] N-Term(TMT6plex); C2(Carbamidomethyl); C8(Carbamidomethyl) 1 ENSEMBL:ENSBTAP00000016046 (Bos taurus) similar to fibulin-1 C isoform 1 ENSEMBL:ENSBTAP00000016046 (Bos taurus) similar to fibulin-1 C isoform 1 0 2 2 0.7802 0 1 1 1 698.33105 1395.65483 1395.6558 -0.69 -0.00048 0/0 0 0 6104348 HCD 30 MS2 0 254.9 110 57.0942 16182 16182 16181 QEplus033719.raw F4 231.2 214.3 231.6 120.9 577.2 154.3 45 3.73 1 TRUE 1.14E-05 1.88E-05 0.995 -250 71991 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALQTTGTAK [K].aLQTTGTAk.[S] N-Term(TMT6plex); K9(TMT6plex) 9 Q6PFD9 Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=2 A0A140T8J8; A0A1B0GRB5; Q3TPG3; B7ZN81; B2RQL0; Q6PFD9; A0A1B0GSX7; A0A1B0GRA7; Q3UJE5 Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Peptidase S59 domain-containing protein OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1; Nup98 protein OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1; Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=2; Nuclear pore complex protein Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Peptidase S59 domain-containing protein OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1 0 2 2 0.5657 0 1 1 1 674.91528 1348.82329 1348.82004 2.41 0.00163 0/0 0 0 8465068 HCD 30 MS2 17.17833 561.1 110 57.0967 16183 16183 16181 QEplus033719.raw F4 599.6 459.7 569.3 457.7 754.8 525.3 251 3.5 1 FALSE 1.14E-05 0.0006814 0.696 -250 72007 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NHAVVCQGCHNAIDPEVQR [K].nHAVVcQGcHNAIDPEVQR.[V] N-Term(TMT6plex); C6(Carbamidomethyl); C9(Carbamidomethyl) 5 Q3ULB1 Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1 Q99L61; P47226-2; P47226; Q3ULB1; Q921W7 Testin OS=Mus musculus OX=10090 GN=Tes PE=2 SV=1; Isoform TES1 of Testin OS=Mus musculus OX=10090 GN=Tes; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=2 0 4 4 0.8178 0 1 1 1 609.04779 2433.16933 2433.17131 -0.81 -0.00049 0/0 0 0 5097788 HCD 30 MS2 46.34171 368.3 110 57.1037 16186 16186 16181 QEplus033719.raw F4 361.8 318.2 382.7 297.7 476.4 372.9 146 5.38 1 FALSE 1.14E-05 1.52E-12 2.342 -250 72034 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NANEMFR [K].nANEMFR.[I] N-Term(TMT6plex) 1 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 2 2 0.6809 0 1 1 1 555.78253 1110.55779 1110.55634 1.3 0.00072 0/0 0 0 7469092.5 HCD 30 MS2 59.40014 1115 110 57.1134 16190 16190 16181 QEplus033719.raw F4 1272.5 805.7 1244.1 987.5 1144 1236 113 2.35 1 FALSE 0.00131 0.0179 0.3 -250 72038 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VKAEGPGLSR [K].vkAEGPGLSR.[T] N-Term(TMT6plex); K2(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 1 2 2 0.404 0 1 1 1 736.45349 1471.89971 1471.89968 0.02 0.00001 0/0 0 0 5351935.5 HCD 30 MS2 0 204.2 110 57.116 16191 16191 16181 QEplus033719.raw F4 205.6 181.6 227.3 196.6 186.4 227.7 311 1.98 1 FALSE 0.001177 0.01596 0.321 -250 72055 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AADPPAENSSAPEAEQGGAE [K].aADPPAENSSAPEAEQGGAE.[-] N-Term(TMT6plex) 6 Q810K5 Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 A2BGG7; Q810K5; Q8BRJ5; P62960; Q71V06; Q60951 Y-box-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=1; Y box protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; Y-box-binding protein 1 OS=Mus musculus OX=10090 GN=Ybx1 PE=1 SV=3; Y box transcription factor (Fragment) OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1; MYB-1b OS=Mus musculus OX=10090 GN=Ybx1 PE=2 SV=1 0 2 2 0.9242 0 1 1 1 1063.98694 2126.9666 2126.96755 -0.45 -0.00048 0/0 0 0 6944917.5 HCD 30 MS2 0 35.2 110 57.1258 16194 16194 16192 QEplus033719.raw F4 30.5 35.3 41 28.9 41.8 33.7 49 5.41 1 FALSE 1.14E-05 4.67E-15 2.819 -250 72062 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTQEQLTK [K].tTQEQLTk.[E] N-Term(TMT6plex); K8(TMT6plex) 3 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1 0 2 2 0.5069 0 1 1 1 703.91675 1406.82622 1406.82552 0.5 0.00035 0/0 0 0 17085878 HCD 30 MS2 60.82079 942.7 81.461 57.1303 16196 16196 16192 QEplus033719.raw F4 913.2 894.3 1002.8 709 1234.3 902.6 381 2.88 1 FALSE 1.14E-05 0.0002703 0.774 -250 72072 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQGVMVGMGQK [R-].hQGVmVGMGQk.[D] N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3UCF8; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 3 3 0.4432 0 1 1 1 549.30188 1645.89109 1645.89184 -0.46 -0.00025 0/0 0 0 12105452 HCD 30 MS2 39.08926 1050.5 81.182 57.1326 16197 16197 16192 QEplus033719.raw F4 1145.1 793.4 1129.5 1123.9 954.1 1157.1 397 4.49 4 FALSE 1.14E-05 3.08E-07 1.334 -250 72093 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMGTVQK [K].gMGTVQk.[G] N-Term(TMT6plex); K7(TMT6plex) 3 Q9CQM8 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=1 Q4VA28; Q9CQM8; O09167 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=2 SV=1; 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=1; 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=3 0 2 2 0.4153 0 1 1 1 589.85229 1178.69731 1178.69675 0.48 0.00028 0/0 0 0 49177736 HCD 30 MS2 34.08194 1248.1 19.403 57.1399 16200 16200 16192 QEplus033719.raw F4 1434.2 1016.7 1273.2 1127.3 1522.1 1115.4 230 2.36 1 FALSE 0.001108 0.01458 0.338 -250 72102 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEDPVKK [K].eEDPVkk.[V] N-Term(TMT6plex); K6(TMT6plex); K7(TMT6plex) 5 Q544Z3 S1 protein D2 OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1 Q9D6G1; Q80XR6; Q544Z3; Q20BD0; Q3TMZ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; S1 protein D2 OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein A/B OS=Mus musculus OX=10090 GN=Hnrnpab PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpab PE=2 SV=1 1 3 3 0.0738 0 1 1 1 511.31494 1531.93027 1531.92987 0.26 0.00013 0/0 0 0 16515587 HCD 30 MS2 50.05212 1400.7 88.057 57.1422 16201 16201 16192 QEplus033719.raw F4 1766.2 1040 1382.1 1080.3 1890.7 1245.1 366 1.49 1 FALSE 0.006252 0.1013 0.003 -250 72108 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GKLDDYQER [K].gkLDDYQER.[M] N-Term(TMT6plex); K2(TMT6plex) 2 Q60865 Caprin-1 OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=2 Q3UFZ6; Q60865 Caprin-1_dimer domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Caprin1 PE=2 SV=1; Caprin-1 OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=2 1 2 2 0.2996 0 1 1 1 791.4386 1581.86992 1581.86369 3.94 0.00311 0/0 0 0 5170603.5 HCD 30 MS2 0 181.4 110 57.1447 16202 16202 16192 QEplus033719.raw F4 186.3 179.7 202.6 133.4 196.3 190 384 2.47 1 FALSE 1.14E-05 6.13E-06 1.088 -250 72115 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YTGNTYK [K].yTGNTYk.[V] N-Term(TMT6plex); K7(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; B9EHT6; A0A087WR50; Q3UGY5; Q4KL80; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.4597 0 1 1 1 652.86475 1304.72222 1304.72507 -2.19 -0.00143 0/0 0 0 7424525.5 HCD 30 MS2 65.17068 842 110 57.152 16204 16204 16203 QEplus033719.raw F4 814 741.9 907 893.5 815.2 880.6 387 2.48 3 FALSE 0.0002518 0.005242 0.496 -250 72132 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLENVNTLR [R].rLENVNTLR.[G] N-Term(TMT6plex) 2 Q3UYM1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nub1 PE=1 SV=1 Q3UYM1; A0A0G2JGQ4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nub1 PE=1 SV=1; NEDD8 ultimate buster 1 OS=Mus musculus OX=10090 GN=Nub1 PE=1 SV=1 1 3 3 0.5227 0 1 1 1 448.60352 1343.79599 1343.79566 0.25 0.00011 0/0 0 0 10940535 HCD 30 MS2 35.60936 554.8 110 57.1593 16207 16207 16203 QEplus033719.raw F4 610.8 518.9 609.5 430.1 611.6 547.9 350 4.4 1 FALSE 1.14E-05 2.38E-06 1.166 -250 72140 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAAWEEPSSGNGTAR [K].gAAWEEPSSGNGTAR.[A] N-Term(TMT6plex) 2 Q8BK67 Protein RCC2 OS=Mus musculus OX=10090 GN=Rcc2 PE=1 SV=1 Q8BK67; A2AWQ2 Protein RCC2 OS=Mus musculus OX=10090 GN=Rcc2 PE=1 SV=1; Protein RCC2 (Fragment) OS=Mus musculus OX=10090 GN=Rcc2 PE=1 SV=1 0 2 2 0.8358 0 1 1 1 859.9184 1718.82952 1718.82954 -0.02 -0.00001 0/0 0 0 1982592.875 HCD 30 MS2 23.19437 124.2 110 57.1644 16209 16209 16203 QEplus033719.raw F4 128.4 136.6 136.4 82.2 146.4 115.2 93 4.81 1 FALSE 1.14E-05 6.31E-16 3.136 -250 72147 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVGTAGSDEK [K].vVGTAGSDEk.[V] N-Term(TMT6plex); K10(TMT6plex) 2 Q91YR9 Prostaglandin reductase 1 OS=Mus musculus OX=10090 GN=Ptgr1 PE=1 SV=2 Q91YR9; Q4FJY5 Prostaglandin reductase 1 OS=Mus musculus OX=10090 GN=Ptgr1 PE=1 SV=2; 15-oxoprostaglandin 13-reductase OS=Mus musculus OX=10090 GN=Ptgr1 PE=2 SV=1 0 2 2 0.4856 0 1 1 1 710.90649 1420.80571 1420.80478 0.66 0.00047 0/0 0 0 16757205 HCD 30 MS2 58.11866 584.2 110 57.1669 16210 16210 16203 QEplus033719.raw F4 623.3 566.5 533.2 389.2 956.5 436.3 432 3.13 1 FALSE 1.14E-05 3.51E-08 1.514 -250 72156 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHMLCK [K].eHMLck.[E] N-Term(TMT6plex); C5(Carbamidomethyl); K6(TMT6plex) 1 Q8BR92 Paralemmin-2 OS=Mus musculus OX=10090 GN=Palm2 PE=1 SV=1 Q8BR92 Paralemmin-2 OS=Mus musculus OX=10090 GN=Palm2 PE=1 SV=1 0 3 3 0.3916 0 1 1 1 425.90347 1275.69587 1275.69537 0.39 0.00017 0/0 0 0 10991533 HCD 30 MS2 60.64149 813 110 57.1694 16211 16211 16203 QEplus033719.raw F4 900.7 572.4 718.2 605.3 1334.6 746.7 320 2.63 1 FALSE 0.005074 0.08739 0.041 -250 72163 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAADAEMEK [K].qAADAEMEk.[H] N-Term(TMT6plex); K9(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.6526 0 1 1 1 725.88489 1450.7625 1450.7612 0.89 0.00065 0/0 0 0 8769307 HCD 30 MS2 0 607.4 110 57.1719 16212 16212 16203 QEplus033719.raw F4 691.4 495.7 605.9 524.8 663.8 663 280 4.03 2 FALSE 1.14E-05 9.84E-07 1.239 -250 72178 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPVLDSHGDK [K].sPVLDSHGDk.[S] N-Term(TMT6plex); K10(TMT6plex) 2 Q52KR3 Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2 PE=1 SV=2 Q52KR3-6; Q52KR3 Isoform 6 of Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2; Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2 PE=1 SV=2 0 3 3 0.6006 0 1 1 1 504.95447 1512.84885 1512.84223 4.38 0.00221 0/0 0 0 6015699 HCD 30 MS2 47.9586 1016.5 110 57.1842 16216 16216 16214 QEplus033719.raw F4 1222 756.1 1071.6 958.9 1041.5 1048.7 373 3.13 1 FALSE 1.14E-05 7.96E-05 0.876 -250 72186 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGLQNMEAR [K].eGLQNMEAR.[L] N-Term(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 2 2 0.6656 0 1 1 1 638.82965 1276.65203 1276.6517 0.25 0.00016 0/0 0 0 55270984 HCD 30 MS2 43.70164 1014.1 22.699 57.1865 16217 16217 16214 QEplus033719.raw F4 1050.1 514.5 791.7 707.1 2192.9 828.2 200 3.05 1 FALSE 1.14E-05 0.000126 0.838 -250 72201 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMGTVQK [K].gMGTVQk.[G] N-Term(TMT6plex); K7(TMT6plex) 3 Q9CQM8 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=1 Q4VA28; Q9CQM8; O09167 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=2 SV=1; 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=1; 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=3 0 3 3 0.2977 0 1 1 1 393.57025 1178.6962 1178.69675 -0.47 -0.00018 0/0 0 0 9252622 HCD 30 MS2 56.34913 744.5 110 57.1915 16219 16219 16214 QEplus033719.raw F4 829.7 592.8 779.5 668 849.8 747.1 304 2.62 1 FALSE 0.001877 0.03163 0.209 -250 72210 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEGGESDWVR [K].nEGGESDWVR.[T] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.701 0 1 1 1 689.33423 1377.66118 1377.65962 1.13 0.00078 0/0 0 0 7699804 HCD 30 MS2 25.29738 503.9 110 57.194 16220 16220 16214 QEplus033719.raw F4 603.9 286.5 424.6 661.7 435.5 611.3 65 3.11 2 FALSE 1.14E-05 2.22E-06 1.172 -250 72218 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQQSFEK [K].tQQSFEk.[Q] N-Term(TMT6plex); K7(TMT6plex) 9 Q80X50 Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1 Q80X50-4; Q80X50-3; Q80X50-5; Q8BKR4; Q8BZ69; Q80X50; Q812D5; Q3TSB0; A0A0G2JEC6 Isoform 4 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Isoform 3 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Isoform 5 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1; Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Lingerer protein-2a OS=Mus musculus OX=10090 GN=lig-2a PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1; Ubiquitin-associated protein 2-like (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1 0 2 2 0.5039 0 1 1 1 663.37939 1325.75151 1325.74654 3.75 0.00249 0/0 0 0 6287155.5 HCD 30 MS2 15.89675 838.9 110 57.1965 16221 16221 16214 QEplus033719.raw F4 904.6 762.4 846.3 661.2 1133.4 725.2 296 2.54 1 FALSE 0.0006126 0.009151 0.419 -250 72226 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DMANQVK [K].dMANQVk.[A] N-Term(TMT6plex); K7(TMT6plex) 1 Q99LX0 Parkinson disease protein 7 homolog OS=Mus musculus OX=10090 GN=Park7 PE=1 SV=1 Q99LX0 Parkinson disease protein 7 homolog OS=Mus musculus OX=10090 GN=Park7 PE=1 SV=1 0 2 2 0.5638 0 1 1 1 632.36053 1263.71379 1263.71313 0.53 0.00033 0/0 0 0 117878520 HCD 30 MS2 3.108755 1050.3 14.155 57.1988 16222 16222 16214 QEplus033719.raw F4 1092.6 890.5 1137.5 981.6 1073.1 1126.7 397 2.98 1 FALSE 0.001028 0.0135 0.352 -250 72246 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQGVMVGMGQK [R-].hQGVmVGMGQk.[D] N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3UCF8; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 4 4 0.2793 0 1 1 1 412.22806 1645.8904 1645.89184 -0.87 -0.00036 0/0 0 0 16737025 HCD 30 MS2 27.77359 527.7 75.639 57.2108 16226 16226 16225 QEplus033719.raw F4 764.9 316.3 482.7 587.6 397.4 617.3 390 2.22 4 FALSE 0.00124 0.01676 0.312 -250 72255 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQPYQLK [R].hQPYQLk.[T] N-Term(TMT6plex); K7(TMT6plex) 3 Q8BWB1; D3YU08 Synaptopodin 2-like protein OS=Mus musculus OX=10090 GN=Synpo2l PE=1 SV=1;Synaptopodin 2-like protein OS=Mus musculus OX=10090 GN=Synpo2l PE=1 SV=1 Q8BWB1; D3YU08; B2RQK7 Synaptopodin 2-like protein OS=Mus musculus OX=10090 GN=Synpo2l PE=1 SV=1; Synaptopodin 2-like protein OS=Mus musculus OX=10090 GN=Synpo2l PE=1 SV=1; Synaptopodin 2-like protein OS=Mus musculus OX=10090 GN=Synpo2l PE=1 SV=1 0 3 3 0.5211 0 1 1 1 457.9436 1371.81626 1371.81489 1 0.00046 0/0 0 0 4676034 HCD 30 MS2 52.29425 593.8 110 57.2134 16227 16227 16225 QEplus033719.raw F4 639.2 441.6 638.2 561 576.9 706.1 300 2.61 2 FALSE 0.002561 0.05041 0.141 -250 72261 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSIDEVDKR [R].gSIDEVDkR.[V] N-Term(TMT6plex); K8(TMT6plex) 3 Q9WVJ2 26S proteasome non-ATPase regulatory subunit 13 OS=Mus musculus OX=10090 GN=Psmd13 PE=1 SV=1 Q9WVJ2; E9Q5I9; F6ZQQ3 26S proteasome non-ATPase regulatory subunit 13 OS=Mus musculus OX=10090 GN=Psmd13 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 13 OS=Mus musculus OX=10090 GN=Psmd13 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 13 (Fragment) OS=Mus musculus OX=10090 GN=Psmd13 PE=1 SV=1 1 3 3 0.4114 0 1 1 1 492.95145 1476.83979 1476.84223 -1.65 -0.00081 0/0 0 0 18729914 HCD 30 MS2 33.79598 1370.7 75.945 57.2179 16229 16229 16225 QEplus033719.raw F4 1347.1 1243.7 1613 1267.9 1241.5 1511.2 512 3.16 1 FALSE 1.14E-05 0.0006682 0.697 -250 72267 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THPQWYPAR [K].tHPQWYPAR.[Q] N-Term(TMT6plex) 2 Q9CY27 Very-long-chain enoyl-CoA reductase OS=Mus musculus OX=10090 GN=Tecr PE=1 SV=1 A0A5F8MQC8; Q9CY27 Very-long-chain enoyl-CoA reductase OS=Mus musculus OX=10090 GN=Tecr PE=1 SV=1; Very-long-chain enoyl-CoA reductase OS=Mus musculus OX=10090 GN=Tecr PE=1 SV=1 0 3 3 0.5499 0 1 1 1 462.24802 1384.7295 1384.73233 -2.05 -0.00095 0/0 0 0 12847472 HCD 30 MS2 17.62093 502.2 83.28 57.2201 16230 16230 16225 QEplus033719.raw F4 502.1 391.9 567.1 511.9 426.5 613.5 207 3.51 1 FALSE 0.0003211 0.00623 0.474 -250 72313 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLGESEIR [K].nLGESEIR.[D] N-Term(TMT6plex) 3 Q99JI4 26S proteasome non-ATPase regulatory subunit 6 OS=Mus musculus OX=10090 GN=Psmd6 PE=1 SV=1 A0A286YDW8; Q8C1T2; Q99JI4 26S proteasome non-ATPase regulatory subunit 6 (Fragment) OS=Mus musculus OX=10090 GN=Psmd6 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psmd6 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 6 OS=Mus musculus OX=10090 GN=Psmd6 PE=1 SV=1 0 2 2 0.4755 0 1 1 1 573.81982 1146.63237 1146.63162 0.66 0.00038 0/0 0 0 40436984 HCD 30 MS2 19.82688 618.7 40.887 57.24 16237 16237 16236 QEplus033719.raw F4 663.9 499.9 691.1 566.6 622.2 668.3 323 3.26 1 FALSE 1.14E-05 0.0007376 0.689 -250 72320 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVGTAGSDEK [K].vVGTAGSDEk.[V] N-Term(TMT6plex); K10(TMT6plex) 2 Q91YR9 Prostaglandin reductase 1 OS=Mus musculus OX=10090 GN=Ptgr1 PE=1 SV=2 Q91YR9; Q4FJY5 Prostaglandin reductase 1 OS=Mus musculus OX=10090 GN=Ptgr1 PE=1 SV=2; 15-oxoprostaglandin 13-reductase OS=Mus musculus OX=10090 GN=Ptgr1 PE=2 SV=1 0 3 3 0.5674 0 1 1 1 474.27374 1420.80667 1420.80478 1.33 0.00063 0/0 0 0 5748478.5 HCD 30 MS2 48.65717 600.6 110 57.2425 16238 16238 16236 QEplus033719.raw F4 643.7 490.1 618.2 439.4 827.9 584.5 481 3.86 1 FALSE 1.14E-05 2.78E-05 0.963 -250 72328 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YQCYCYGR [R].yQcYcYGR.[G] N-Term(TMT6plex); C3(Carbamidomethyl); C5(Carbamidomethyl) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.7829 0 1 1 1 699.81085 1398.61443 1398.61321 0.87 0.00061 0/0 0 0 26855282 HCD 30 MS2 10.70002 792.5 63.122 57.2447 16239 16239 16236 QEplus033719.raw F4 643.6 743.7 963.3 1003.5 568.3 832.9 19 3.04 3 FALSE 0.0008445 0.01167 0.378 -250 72341 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIDMVEGDEGR [R].hIDMVEGDEGR.[M] N-Term(TMT6plex) 2 O08528 Hexokinase-2 OS=Mus musculus OX=10090 GN=Hk2 PE=1 SV=1 O08528; E9Q5B5 Hexokinase-2 OS=Mus musculus OX=10090 GN=Hk2 PE=1 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk2 PE=1 SV=1 0 3 3 0.8294 0 1 1 1 496.24414 1486.71787 1486.71576 1.42 0.0007 0/0 0 0 7518248 HCD 30 MS2 46.66766 707.4 110 57.2495 16241 16241 16236 QEplus033719.raw F4 768.3 549.8 755.4 720 743.5 707.5 70 3.4 1 FALSE 1.14E-05 2.51E-06 1.161 -250 72348 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GICECGACK [R].gIcEcGAck.[C] N-Term(TMT6plex); C3(Carbamidomethyl); C5(Carbamidomethyl); C8(Carbamidomethyl); K9(TMT6plex) 2 P09055 Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 P09055-2; P09055 Isoform 2 of Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1; Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 0 2 2 0.6127 0 1 1 1 756.87469 1512.74211 1512.73731 3.17 0.0024 0/0 0 0 6214513 HCD 30 MS2 20.19695 577.1 110 57.252 16242 16242 16236 QEplus033719.raw F4 617.7 470.5 602.3 516.1 677 578.8 117 3.95 1 FALSE 1.14E-05 1.06E-06 1.233 -250 72353 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGESTNAAK [R].lGESTNAAk.[Q] N-Term(TMT6plex); K9(TMT6plex) 2 Q99JR1 Sideroflexin-1 OS=Mus musculus OX=10090 GN=Sfxn1 PE=1 SV=3 Q8BPC9; Q99JR1 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sfxn1 PE=2 SV=1; Sideroflexin-1 OS=Mus musculus OX=10090 GN=Sfxn1 PE=1 SV=3 0 2 2 0.205 0 1 1 1 674.89435 1348.78142 1348.78365 -1.65 -0.00112 0/0 0 0 4167459.25 HCD 30 MS2 38.28468 547.8 110 57.2546 16243 16243 16236 QEplus033719.raw F4 564.8 537.2 561.6 391.3 741.8 490.4 538 2.78 1 FALSE 0.0002019 0.004217 0.521 -250 72363 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQGVMVGMGQK [R-].hQGVmVGMGQk.[D] N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3UCF8; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 2 2 0.1993 0 1 1 1 823.45081 1645.89433 1645.89184 1.52 0.00125 0/0 0 0 3774399.25 HCD 30 MS2 0 269.2 110 57.2571 16244 16244 16236 QEplus033719.raw F4 294 197.3 322.7 278.5 217.8 305.1 390 3.01 4 FALSE 1.14E-05 1.58E-09 1.769 -250 72375 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous INGLENR [K].iNGLENR.[V] N-Term(TMT6plex) 1 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 0 2 2 0.3397 0 1 1 1 522.80383 1044.60039 1044.59992 0.45 0.00023 0/0 0 0 10138480 HCD 30 MS2 55.58331 863.8 96.45 57.2619 16246 16246 16236 QEplus033719.raw F4 906.3 795 926.3 685 1030.9 839.5 220 2.09 1 FALSE 0.001719 0.02871 0.223 -250 72381 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQQQLTAMK [K].rQQQLTAMk.[V] N-Term(TMT6plex); K9(TMT6plex) 9 Q69ZX3; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; A0A2R8VHF9; A0A338P6K2; A2VCK0; O08638-2; O08638; Q8VDD5; A0A2R8VKI5; E9QPE7 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-9 (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2 1 3 3 0.6175 0 1 1 1 521.31427 1561.92826 1561.92485 2.18 0.00113 0/0 0 0 11031960 HCD 30 MS2 40.42783 953.9 100.523 57.2692 16248 16248 16247 QEplus033719.raw F4 1040.3 851.5 1054.1 661.7 1195.5 920.2 447 4.34 2 FALSE 1.14E-05 2.26E-06 1.17 -250 72392 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAGSAPLK [K].dAGSAPLk.[I] N-Term(TMT6plex); K8(TMT6plex) 1 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 0 2 2 0.2688 0 1 1 1 608.86914 1216.731 1216.73016 0.7 0.00042 0/0 0 0 28415360 HCD 30 MS2 34.82016 899.5 45.068 57.274 16250 16250 16247 QEplus033719.raw F4 908.9 934.5 840.3 635.8 1329 748.7 409 2.79 1 FALSE 1.14E-05 0.0001011 0.856 -250 72413 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KSAEVDSDDTGGSAAQK [K].kSAEVDSDDTGGSAAQk.[Q] N-Term(TMT6plex); K1(TMT6plex); K17(TMT6plex) 1 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 1 3 3 0.8402 0 1 1 1 785.08612 2353.24381 2353.24501 -0.51 -0.0004 0/0 0 0 3306447.25 HCD 30 MS2 0 183.1 110 57.2812 16253 16253 16247 QEplus033719.raw F4 170.9 157.2 223.5 207.5 142.3 197.2 424 7.76 1 FALSE 1.14E-05 6.31E-16 5.106 -250 72418 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSAEQAK [R].lSAEQAk.[Q] N-Term(TMT6plex); K7(TMT6plex) 1 Q8VDP4 Cell cycle and apoptosis regulator protein 2 OS=Mus musculus OX=10090 GN=Ccar2 PE=1 SV=2 Q8VDP4 Cell cycle and apoptosis regulator protein 2 OS=Mus musculus OX=10090 GN=Ccar2 PE=1 SV=2 0 2 2 0.0859 0 1 1 1 602.86481 1204.72234 1204.73016 -6.49 -0.00391 0/0 0 0 3307366.25 HCD 30 MS2 40.12963 815.8 110 57.2837 16254 16254 16247 QEplus033719.raw F4 827.2 688.4 821.3 778.4 996.4 783 406 1.98 1 FALSE 0.001429 0.02072 0.275 -250 72440 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSSEAEIQAK [R].qSSEAEIQAk.[A] N-Term(TMT6plex); K10(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5806 0 1 1 1 774.93536 1548.86345 1548.86336 0.06 0.00005 0/0 0 0 9537733 HCD 30 MS2 51.34806 592.4 110 57.2913 16257 16257 16247 QEplus033719.raw F4 630.2 519.9 631.5 532.2 620.5 619.8 405 3.72 2 FALSE 1.14E-05 3.60E-08 1.512 -250 72450 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTDEAAFQK [K].rTDEAAFQk.[V] N-Term(TMT6plex); K9(TMT6plex) 2 A0A0G2JGD2 Protein S100-A4 (Fragment) OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1 A0A0G2JGD2; P07091 Protein S100-A4 (Fragment) OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1; Protein S100-A4 OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1 1 3 3 0.5948 0 1 1 1 508.62494 1523.86026 1523.85821 1.35 0.00068 0/0 0 0 497406176 HCD 30 MS2 5.770729 582.1 3.406 57.2986 16259 16259 16258 QEplus033719.raw F4 524.8 575.2 660.5 360.1 881.2 490.8 406 5.01 1 FALSE 1.14E-05 3.88E-11 2.075 -250 72459 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANEEELK [K].aNEEELk.[R] N-Term(TMT6plex); K7(TMT6plex) 2 Q99JI4 26S proteasome non-ATPase regulatory subunit 6 OS=Mus musculus OX=10090 GN=Psmd6 PE=1 SV=1 Q8C1T2; Q99JI4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Psmd6 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 6 OS=Mus musculus OX=10090 GN=Psmd6 PE=1 SV=1 0 2 2 0.4444 0 1 1 1 645.86823 1290.72917 1290.73055 -1.07 -0.00069 0/0 0 0 6861998.5 HCD 30 MS2 52.77901 1105.5 110 57.3011 16260 16260 16258 QEplus033719.raw F4 1118.8 658.8 1034.5 1467.3 944.2 1409.2 387 2.79 1 FALSE 0.000262 0.005303 0.494 -250 72477 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDVAVIR [K].gDVAVIR.[I] N-Term(TMT6plex) 2 Q8BMS1 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1" Q8BMS1; Q3TB39 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1; 3HCDH_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hadha PE=2 SV=1" 0 2 2 0.177 0 1 1 1 479.79785 958.58843 958.5883 0.14 0.00007 0/0 0 0 36162052 HCD 30 MS2 11.39768 737.9 41.881 57.3056 16262 16262 16258 QEplus033719.raw F4 801.6 538.1 797.1 742.7 665.6 882.2 227 2.09 1 FALSE 0.001421 0.02044 0.277 -250 72485 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HAEMVHTGLK [K].hAEMVHTGLk.[L] N-Term(TMT6plex); K10(TMT6plex) 6 Q3U0U5 Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1 Q3UNQ0; Q3TC53; B1ARS0; P40124; Q3U0U5; Q3UVJ2 Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Cap1 PE=1 SV=1; Adenylyl cyclase-associated protein 1 OS=Mus musculus OX=10090 GN=Cap1 PE=1 SV=4; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1 0 4 4 0.67 0 1 1 1 395.98019 1580.89895 1580.8983 0.41 0.00016 0/0 0 0 25235710 HCD 30 MS2 41.13589 566.4 37.862 57.3079 16263 16263 16258 QEplus033719.raw F4 771.5 511.7 593.7 377.2 597.3 547.2 381 4 1 FALSE 1.14E-05 2.49E-05 0.972 -250 72493 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CGQSAAVASPGGSIDSR [R].cGQSAAVASPGGSIDSR.[D] N-Term(TMT6plex); C1(Carbamidomethyl) 4 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" B9EKP5; Q8BTM8-2; Q8BTM8; B7FAU9 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Isoform 2 of Filamin-A OS=Mus musculus OX=10090 GN=Flna; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.8023 0 1 1 1 616.97388 1848.90708 1848.90714 -0.03 -0.00002 0/0 0 0 6971647 HCD 30 MS2 25.77699 545.8 110 57.3149 16266 16266 16258 QEplus033719.raw F4 556.4 541.5 589.4 463.2 657.8 466.7 144 6.17 1 FALSE 1.14E-05 1.38E-15 2.92 -250 72498 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TMVAGCGK [K].tMVAGcGk.[R] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 3 O35566 CD151 antigen OS=Mus musculus OX=10090 GN=Cd151 PE=1 SV=2 O35566; A0A1B0GSK8; Q921J7 CD151 antigen OS=Mus musculus OX=10090 GN=Cd151 PE=1 SV=2; Tetraspanin (Fragment) OS=Mus musculus OX=10090 GN=Cd151 PE=1 SV=1; Tetraspanin OS=Mus musculus OX=10090 GN=Cd151 PE=2 SV=1 0 2 2 0.347 0 1 1 1 641.35846 1281.70964 1281.70593 2.89 0.00185 0/0 0 0 7507993 HCD 30 MS2 20.53367 1002.2 110 57.3174 16267 16267 16258 QEplus033719.raw F4 981.2 914.3 998.4 727.7 1523.6 867.7 343 2.68 1 FALSE 0.001343 0.01897 0.29 -250 72508 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CGQSAAVASPGGSIDSR [R].cGQSAAVASPGGSIDSR.[D] N-Term(TMT6plex); C1(Carbamidomethyl) 4 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" B9EKP5; Q8BTM8-2; Q8BTM8; B7FAU9 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Isoform 2 of Filamin-A OS=Mus musculus OX=10090 GN=Flna; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.7937 0 1 1 1 924.95801 1848.90874 1848.90714 0.86 0.0008 0/0 0 0 3665828.25 HCD 30 MS2 0 176.4 110 57.32 16268 16268 16258 QEplus033719.raw F4 188.6 162.4 160.3 98.2 317.5 131.1 149 5.72 1 FALSE 1.14E-05 6.31E-16 3.218 -250 72518 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNLELPR [K].rNLELPR.[L] N-Term(TMT6plex) 5 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q8CD09; Q9ERG0; Q8C7S2; Q8C3R7; Q8BT15 LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 1 3 3 0.3119 0 1 1 1 376.2356 1126.69223 1126.68941 2.51 0.00094 0/0 0 0 63478624 HCD 30 MS2 23.31483 523.3 21.146 57.3296 16271 16271 16269 QEplus033719.raw F4 665.2 313.5 445.6 501.3 812.6 401.8 146 2.95 1 FALSE 0.002309 0.04592 0.155 -250 72531 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GICECGACK [R].gIcEcGAck.[C] N-Term(TMT6plex); C3(Carbamidomethyl); C5(Carbamidomethyl); C8(Carbamidomethyl); K9(TMT6plex) 2 P09055 Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 P09055-2; P09055 Isoform 2 of Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1; Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 0 3 3 0.543 0 1 1 1 504.9176 1512.73825 1512.73731 0.62 0.00031 0/0 0 0 12593203 HCD 30 MS2 49.6823 1131.8 110 57.3345 16273 16273 16269 QEplus033719.raw F4 1296.5 834.6 1207.1 1102.1 1176.6 1174.1 93 3.37 1 FALSE 1.14E-05 0.0001593 0.818 -250 72543 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGCEYQFR [K].tGcEYQFR.[I] N-Term(TMT6plex); C3(Carbamidomethyl) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.5505 0 1 1 1 645.31171 1289.61614 1289.61459 1.2 0.00077 0/0 0 0 6795422.5 HCD 30 MS2 40.16636 854.2 110 57.3396 16275 16275 16269 QEplus033719.raw F4 912.9 488.5 809.5 1204.8 651.1 1058.1 56 2.18 2 FALSE 0.0002909 0.00593 0.48 -250 72551 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPSYLER [K].ePSYLER.[L] N-Term(TMT6plex) 2 Q4VBE8 WD repeat-containing protein 18 OS=Mus musculus OX=10090 GN=Wdr18 PE=1 SV=1 Q8K265; Q4VBE8 WD repeat-containing protein 18 (Fragment) OS=Mus musculus OX=10090 GN=Wdr18 PE=2 SV=1; WD repeat-containing protein 18 OS=Mus musculus OX=10090 GN=Wdr18 PE=1 SV=1 0 2 2 0.1 0 1 1 1 561.80304 1122.5988 1122.59925 -0.4 -0.00023 0/0 0 0 5208983.5 HCD 30 MS2 0 637.3 110 57.3421 16276 16276 16269 QEplus033719.raw F4 691.8 519.6 682.2 560.9 706.5 662.8 204 2.3 1 FALSE 0.0003496 0.006684 0.464 -250 72564 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YVDEASK [K].yVDEASk.[K] N-Term(TMT6plex); K7(TMT6plex) 3 Q641N3 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 Q641N3; P14131; Q5CZY9 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1; 40S ribosomal protein S16 OS=Mus musculus OX=10090 GN=Rps16 PE=1 SV=4; Rps16 protein OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 0 2 2 0.5 0 1 1 1 635.35925 1269.71123 1269.70909 1.69 0.00107 0/0 0 0 13614156 HCD 30 MS2 32.70115 1252.7 110 57.3469 16278 16278 16269 QEplus033719.raw F4 1252 956.6 1335.5 1215.8 1376.6 1379.8 267 2.78 1 FALSE 0.001248 0.01691 0.311 -250 72573 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVQVEQSK [K].tVQVEQSk.[V] N-Term(TMT6plex); K8(TMT6plex) 7 E9Q1G8 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2 E9Q1G8; Q8C2A3; E9Q9F5; Q5DTS3; Q3UNN1; O55131; Q3UGE0 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin-7 (Fragment) OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin-7 OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=1; Septin-type G domain-containing protein OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1 0 2 2 0.47 0 1 1 1 688.91077 1376.81426 1376.81495 -0.5 -0.00035 0/0 0 0 7242654 HCD 30 MS2 19.34746 635.5 110 57.3494 16279 16279 16269 QEplus033719.raw F4 734 540.2 622.8 535 773.5 607.8 462 3.17 1 FALSE 1.14E-05 6.14E-05 0.897 -250 72583 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTDEAAFQK [K].rTDEAAFQk.[V] N-Term(TMT6plex); K9(TMT6plex) 2 A0A0G2JGD2 Protein S100-A4 (Fragment) OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1 A0A0G2JGD2; P07091 Protein S100-A4 (Fragment) OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1; Protein S100-A4 OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1 1 2 2 0.5745 0 1 1 1 762.43359 1523.85991 1523.85821 1.11 0.00085 0/0 0 0 14651148 HCD 30 MS2 14.28537 574.3 110 57.3567 16281 16281 16280 QEplus033719.raw F4 551 552.4 613.8 387.4 783.3 558.1 408 2.82 1 FALSE 1.14E-05 0.0002357 0.786 -250 72590 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFNSANEDNVTQVR [K].rFNSANEDNVTQVR.[T] N-Term(TMT6plex) 6 Q3TVZ1 Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1 Q8C6E3; P24270; Q3UF58; Q3UZE7; Q3TVZ1; Q542K4 Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1; Catalase OS=Mus musculus OX=10090 GN=Cat PE=1 SV=4; Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1; Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1; Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1; Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1 1 3 3 0.73 0 1 1 1 626.99298 1878.96439 1878.96195 1.3 0.00081 0/0 0 0 2860424.75 HCD 30 MS2 23.6758 331.1 110 57.3592 16282 16282 16280 QEplus033719.raw F4 353.7 270.4 362.6 274.6 406.7 318.8 284 6 1 FALSE 1.14E-05 2.06E-15 2.887 -250 72596 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEPLIGR [K].sEPLIGR.[K] N-Term(TMT6plex) 14 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WS99; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.2838 0 1 1 1 500.80341 1000.59953 1000.59886 0.67 0.00034 0/0 0 0 14451111 HCD 30 MS2 32.56908 765.5 58.895 57.3637 16284 16284 16280 QEplus033719.raw F4 814.5 576.2 851 798.8 654.2 898.5 183 2.29 3 FALSE 0.0009824 0.01314 0.357 -250 72601 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAEEAEEAREQAER [R].aAEEAEEAREQAER.[E] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.6674 0 1 1 1 606.63226 1817.88224 1817.8827 -0.25 -0.00015 0/0 0 0 13590376 HCD 30 MS2 4.792593 554.3 110 57.3662 16285 16285 16280 QEplus033719.raw F4 575.7 439.2 591.5 464.6 639.8 614.8 110 4.33 2 FALSE 1.14E-05 1.67E-12 2.334 -250 72620 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTGLNPNAK [K].gTGLNPNAk.[V] N-Term(TMT6plex); K9(TMT6plex) 6 G3X9Q6 La-related protein 4 OS=Mus musculus OX=10090 GN=Larp4 PE=1 SV=1 G3X9Q6; A0A2R8W6Y5; Q3T9Z3; Q8BWW4; A0A2R8VHW8; E9Q066 La-related protein 4 OS=Mus musculus OX=10090 GN=Larp4 PE=1 SV=1; La-related protein 4 OS=Mus musculus OX=10090 GN=Larp4 PE=1 SV=1; HTH La-type RNA-binding domain-containing protein OS=Mus musculus OX=10090 GN=Larp4 PE=2 SV=1; La-related protein 4 OS=Mus musculus OX=10090 GN=Larp4 PE=1 SV=2; La-related protein 4 OS=Mus musculus OX=10090 GN=Larp4 PE=1 SV=1; La-related protein 4 OS=Mus musculus OX=10090 GN=Larp4 PE=1 SV=1 0 2 2 0.5662 0 1 1 1 665.39722 1329.78716 1329.78907 -1.44 -0.00096 0/0 0 0 10233973 HCD 30 MS2 0 778.6 110 57.3713 16287 16287 16280 QEplus033719.raw F4 733.6 674.8 875.7 569.7 940.3 877.5 345 3.55 1 FALSE 1.14E-05 5.70E-06 1.094 -250 72638 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FNQGMANTAR [K].fNQGMANTAR.[K] N-Term(TMT6plex) 1 Q9CYA0 Protein disulfide isomerase Creld2 OS=Mus musculus OX=10090 GN=Creld2 PE=1 SV=1 Q9CYA0 Protein disulfide isomerase Creld2 OS=Mus musculus OX=10090 GN=Creld2 PE=1 SV=1 0 2 2 0.7077 0 1 1 1 669.84363 1338.67998 1338.67858 1.04 0.0007 0/0 0 0 8928311 HCD 30 MS2 16.54954 676.8 110 57.3762 16289 16289 16280 QEplus033719.raw F4 660.4 636 757.9 557.3 749.9 699.1 184 3.49 1 FALSE 1.14E-05 6.05E-07 1.279 -250 72643 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTPTNGEMR [K].lTPTNGEMR.[K] N-Term(TMT6plex) 3 Q6P542 ATP-binding cassette sub-family F member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=1 SV=1 Q3U6P1; Q6P542; Q5RL55 "ABC transporter domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Abcf1 PE=2 SV=1; ATP-binding cassette sub-family F member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=1 SV=1; ATP-binding cassette, sub-family F (GCN20), member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=2 SV=1" 0 2 2 0.4061 0 1 1 1 624.33417 1247.66106 1247.66154 -0.38 -0.00024 0/0 0 0 5426900 HCD 30 MS2 44.0114 734.6 110 57.3787 16290 16290 16280 QEplus033719.raw F4 727.9 547.8 759 675.1 791.9 905.7 242 2.61 1 FALSE 0.00219 0.04241 0.166 -250 72653 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVHPDTGISSK [K].qVHPDTGISSk.[A] N-Term(TMT6plex); K11(TMT6plex) 18 Q64475; Q64525 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3;Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64475; Q8CGP2; Q64525; Q64524; Q8CGP1; P10854; A0JNS9; Q64478; P70696; Q9D2U9; Q8CGP2-2; Q8CBB6; Q6ZWY9; Q8CGP0; Q8VEE3; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 2-E OS=Mus musculus OX=10090 GN=H2bc21 PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Histone H2B type 3-A OS=Mus musculus OX=10090 GN=Hist3h2ba PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3; Histone H2B type 3-B OS=Mus musculus OX=10090 GN=H2bu1 PE=1 SV=3; Hist2h2bb protein OS=Mus musculus OX=10090 GN=Hist2h2bb PE=2 SV=1; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 0 3 3 0.8151 0 1 1 1 542.98053 1626.92704 1626.92154 3.38 0.00183 0/0 0 0 2985233920 HCD 30 MS2 4.372249 437.4 0.642 57.386 16292 16292 16291 QEplus033719.raw F4 438.6 527 424.1 296.1 757.1 181.7 387 5.03 2 FALSE 1.14E-05 1.29E-07 1.406 -250 72660 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGVEAK [K].vGVEAk.[Q] N-Term(TMT6plex); K6(TMT6plex) 5 Q9CWI9 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1 Q497E1; Q9CSN9; Q9CWI9; Q9CZI5; P62267 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 (Fragment) OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=1 SV=3 0 2 2 0.1311 0 1 1 1 530.84302 1060.67876 1060.67667 1.97 0.00105 0/0 0 0 60335480 HCD 30 MS2 13.20129 1314.3 29.864 57.3883 16293 16293 16291 QEplus033719.raw F4 1628.9 1000.5 1410.6 1211.7 1431.9 1202.5 152 2.06 1 FALSE 0.007115 0.112 -0.025 -250 72670 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HAEMVHTGLK [K].hAEMVHTGLk.[L] N-Term(TMT6plex); K10(TMT6plex) 6 Q3U0U5 Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1 Q3UNQ0; Q3TC53; B1ARS0; P40124; Q3U0U5; Q3UVJ2 Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Cap1 PE=1 SV=1; Adenylyl cyclase-associated protein 1 OS=Mus musculus OX=10090 GN=Cap1 PE=1 SV=4; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1 0 3 3 0.7253 0 1 1 1 527.63916 1580.90293 1580.8983 2.92 0.00154 0/0 0 0 14447057 HCD 30 MS2 16.1968 1034.6 95.48 57.3906 16294 16294 16291 QEplus033719.raw F4 1016 997.4 1224.1 748.1 1202.5 1019.7 391 5.06 1 FALSE 1.14E-05 8.12E-09 1.634 -250 72682 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTPTNGEMR [K].lTPTNGEMR.[K] N-Term(TMT6plex) 3 Q6P542 ATP-binding cassette sub-family F member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=1 SV=1 Q3U6P1; Q6P542; Q5RL55 "ABC transporter domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Abcf1 PE=2 SV=1; ATP-binding cassette sub-family F member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=1 SV=1; ATP-binding cassette, sub-family F (GCN20), member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=2 SV=1" 0 2 2 0.4762 0 1 1 1 624.33765 1247.66802 1247.66154 5.19 0.00324 0/0 0 0 6198453 HCD 30 MS2 18.72648 707.3 110 57.3956 16296 16296 16291 QEplus033719.raw F4 684.4 541 735.8 670.5 771.6 840.8 273 2.52 1 FALSE 0.002182 0.04185 0.168 -250 72701 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEVVDSDGSK [K].tEVVDSDGSk.[T] N-Term(TMT6plex); K10(TMT6plex) 1 Q8JZN5 "Complex I assembly factor ACAD9, mitochondrial OS=Mus musculus OX=10090 GN=Acad9 PE=1 SV=2" Q8JZN5 "Complex I assembly factor ACAD9, mitochondrial OS=Mus musculus OX=10090 GN=Acad9 PE=1 SV=2" 0 2 2 0.5642 0 1 1 1 747.90631 1494.80535 1494.80517 0.11 0.00009 0/0 0 0 4245565.5 HCD 30 MS2 0 393 110 57.4006 16298 16298 16291 QEplus033719.raw F4 387.3 323.3 400.6 372.3 429.5 445 358 4.36 1 FALSE 1.14E-05 8.12E-09 1.634 -250 72713 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSTQEEIKK [K].sSTQEEIkk.[R] N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex) 2 Q3UHW9 ADF-H domain-containing protein OS=Mus musculus OX=10090 GN=Cfl2 PE=1 SV=1 A0A1Y7VJ71; Q3UHW9 Cofilin-2 OS=Mus musculus OX=10090 GN=Cfl2 PE=1 SV=1; ADF-H domain-containing protein OS=Mus musculus OX=10090 GN=Cfl2 PE=1 SV=1 1 3 3 0.4137 0 1 1 1 579.68402 1737.03751 1737.03613 0.8 0.00046 0/0 0 0 65104836 HCD 30 MS2 18.71252 929.3 31.816 57.4054 16300 16300 16291 QEplus033719.raw F4 1057.2 452.6 898.6 1315.8 701.8 1149.9 384 2.78 1 FALSE 5.44E-05 0.002107 0.593 -250 72747 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSTAAQLSK [KR].gSTAAQLSk.[T] N-Term(TMT6plex); K9(TMT6plex) 5 Q9D154 Leukocyte elastase inhibitor A OS=Mus musculus OX=10090 GN=Serpinb1a PE=1 SV=1 Z4YK03; Q8BK60; Q8VHP7; Q5SV42; Q9D154 Leukocyte elastase inhibitor A (Fragment) OS=Mus musculus OX=10090 GN=Serpinb1a PE=1 SV=2; SERPIN domain-containing protein OS=Mus musculus OX=10090 GN=Serpinb1a PE=2 SV=1; Leukocyte elastase inhibitor B OS=Mus musculus OX=10090 GN=Serpinb1b PE=1 SV=1; Leukocyte elastase inhibitor C OS=Mus musculus OX=10090 GN=Serpinb1c PE=1 SV=1; Leukocyte elastase inhibitor A OS=Mus musculus OX=10090 GN=Serpinb1a PE=1 SV=1 0 2 2 0.5595 0 1 1 1 660.89825 1320.78923 1320.78874 0.38 0.00025 0/0 0 0 18260418 HCD 30 MS2 22.2919 1147.3 110 57.422 16306 16306 16302 QEplus033719.raw F4 1316.9 722 793.3 1496.9 1442.2 1112.4 345 3.7 1 FALSE 1.14E-05 1.77E-06 1.19 -250 72757 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELSATSSTQK [K].eLSATSSTQk.[I] N-Term(TMT6plex); K10(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.5124 0 1 1 1 503.95801 1509.85947 1509.85246 4.64 0.00234 0/0 0 0 7585335 HCD 30 MS2 28.63443 769.7 110 57.4269 16308 16308 16302 QEplus033719.raw F4 872.2 464 765.5 903.2 614.5 999 408 3.22 2 FALSE 1.14E-05 0.0001301 0.835 -250 72765 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDTPCDDFTR [K].sDTPcDDFTR.[C] N-Term(TMT6plex); C5(Carbamidomethyl) 15 Q3U8W3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Grn PE=2 SV=1 Q3U8W3; Q3UC19; Q3TX66; Q3TW77; Q9D2V3; Q3UAJ3; Q3UD85; H3BJE0; Q3TVQ3; Q3U9K2; Q544Y8; Q3UDD6; Q3U5Q6; Q3U9N4; Q3TWT4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Grn PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Grn PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Grn PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Grn PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Grn PE=2 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Grn PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Grn PE=2 SV=1; Progranulin (Fragment) OS=Mus musculus OX=10090 GN=Grn PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Grn PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Grn PE=2 SV=1; Granulin OS=Mus musculus OX=10090 GN=Grn PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Grn PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Grn PE=2 SV=1; Progranulin OS=Mus musculus OX=10090 GN=Grn PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Grn PE=2 SV=1 0 2 2 0.8597 0 1 1 1 721.82568 1442.64409 1442.64192 1.5 0.00108 0/0 0 0 4932132.5 HCD 30 MS2 16.79216 314.1 110 57.4295 16309 16309 16302 QEplus033719.raw F4 295 347.6 348.6 223.8 400.9 268.5 23 3.92 1 FALSE 1.14E-05 0.0002467 0.782 -250 72784 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRPLNAVSQDGK [R].sRPLNAVSQDGk.[ER] N-Term(TMT6plex); K12(TMT6plex) 5 Q9JKB3; Q68G78 Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3 PE=1 SV=2;Csda protein OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1 Q9JKB3; Q68G78; Q9JKB3-2; Q8BPG0; Q64369 Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3 PE=1 SV=2; Csda protein OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1; Isoform 2 of Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3; CSD domain-containing protein OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1; Y-box binding protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2bp3 PE=2 SV=1 0 3 3 0.6956 0 1 1 1 577.33783 1729.99894 1729.9961 1.64 0.00094 0/0 0 0 16809008 HCD 30 MS2 15.62642 981 110 57.4367 16312 16312 16302 QEplus033719.raw F4 1145.7 667 1024.9 942.2 923.3 1182.8 415 5.42 2 FALSE 1.14E-05 7.67E-10 1.829 -250 72802 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVVVVR [R].kVVVVR.[C] N-Term(TMT6plex); K1(TMT6plex) 10 A0A1B0GS68 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Gm45713 PE=2 SV=1 A0A1B0GS68; A0A1B0GRH1; Q3TDS9; A0A1B0GSC2; A0A1B0GSL5; P19253; A0A1B0GSJ2; A0A1B0GT00; A0A1B0GSQ6; A0A1B0GSB2 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Gm45713 PE=2 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=2 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=4; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1 1 3 3 0.3381 0 1 1 1 386.60944 1157.81375 1157.81343 0.28 0.00011 0/0 0 0 29073286 HCD 30 MS2 41.72956 668.7 33.066 57.4463 16315 16315 16313 QEplus033719.raw F4 616 508.3 795.3 656.4 645.2 791.1 104 2.1 1 FALSE 0.004499 0.08035 0.061 -250 72812 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDTEEYNLR [K].eDTEEYNLR.[D] N-Term(TMT6plex) 9 Q5FB19 Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1 Q8BG05-2; Q5U3M2; Q58E39; Q6PFA7; Q3UZG3; Q5FB19; B2RXM2; A2AL12; Q6P6I7 Isoform 2 of Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3; Hnrpa3 protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Hnrpa3 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Hnrpa3 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1; EG627828 protein OS=Mus musculus OX=10090 GN=Gm6793 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1; Hnrpa3 protein OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=2 SV=1 0 2 2 0.732 0 1 1 1 699.34137 1397.67546 1397.6746 0.61 0.00043 0/0 0 0 75245776 HCD 30 MS2 35.88873 595.3 21.852 57.4485 16316 16316 16313 QEplus033719.raw F4 545 541.5 711.2 569.8 595.1 609.2 94 3.47 1 FALSE 1.14E-05 1.08E-05 1.041 -250 72819 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVQQGTIK [K].aVQQGTIk.[C] N-Term(TMT6plex); K8(TMT6plex) 3 Q99J29 Carboxypeptidase OS=Mus musculus OX=10090 GN=Scpep1 PE=2 SV=1 Q99J29; Q920A5; Q3U5P4 Carboxypeptidase OS=Mus musculus OX=10090 GN=Scpep1 PE=2 SV=1; Retinoid-inducible serine carboxypeptidase OS=Mus musculus OX=10090 GN=Scpep1 PE=1 SV=2; Carboxypeptidase OS=Mus musculus OX=10090 GN=Scpep1 PE=2 SV=1 0 2 2 0.4506 0 1 1 1 651.91144 1302.8156 1302.81456 0.8 0.00052 0/0 0 0 27882116 HCD 30 MS2 8.15951 1346.2 110 57.4511 16317 16317 16313 QEplus033719.raw F4 1455.9 1328.4 1356.4 1064.4 1687.4 1184.5 484 3.24 1 FALSE 1.14E-05 0.0001988 0.8 -250 72829 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVQVEQSK [K].tVQVEQSk.[V] N-Term(TMT6plex); K8(TMT6plex) 7 E9Q1G8 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2 E9Q1G8; Q8C2A3; E9Q9F5; Q5DTS3; Q3UNN1; O55131; Q3UGE0 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin-7 (Fragment) OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin-7 OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=1; Septin-type G domain-containing protein OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1 0 3 3 0.3795 0 1 1 1 459.61041 1376.81668 1376.81495 1.26 0.00058 0/0 0 0 18176936 HCD 30 MS2 27.14305 622.1 54.647 57.4533 16318 16318 16313 QEplus033719.raw F4 814.5 479.8 616.4 453.6 746.5 621.7 421 3.32 1 FALSE 5.44E-05 0.002175 0.59 -250 72838 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRGTVLLSGPR [K].gRGTVLLSGPR.[K] N-Term(TMT6plex) 6 P35980 60S ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=3 A0A1B0GSS8; Q642K1; A0A1B0GQU8; Q0QEW9; A0A1B0GSF7; P35980 60S ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=1; Ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=2 SV=1; 60S ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=1; Ribosomal protein L18 (Fragment) OS=Mus musculus OX=10090 GN=Rpl18 PE=2 SV=1; 60S ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=1; 60S ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=3 1 3 3 0.5483 0 1 1 1 447.94409 1341.81772 1341.8164 0.99 0.00044 0/0 0 0 18167858 HCD 30 MS2 20.27389 704.8 82.749 57.4556 16319 16319 16313 QEplus033719.raw F4 833.3 516.3 722.6 603.8 860.5 692.5 263 4.14 1 FALSE 1.14E-05 1.31E-06 1.215 -250 72844 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AESEEMETSQAGSK [K].aESEEMETSQAGSk.[D] N-Term(TMT6plex); K14(TMT6plex) 4 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 0 3 3 0.7603 0 1 1 1 647.98785 1941.94901 1941.94756 0.75 0.00048 0/0 0 0 16851966 HCD 30 MS2 5.019486 551.2 110 57.4581 16320 16320 16313 QEplus033719.raw F4 596.9 421.7 598.8 494.3 573.6 621.8 167 4.13 1 FALSE 1.14E-05 7.94E-09 1.636 -250 72849 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIEVGGGRK [K].eIEVGGGRk.[A] N-Term(TMT6plex); K9(TMT6plex) 1 Q4FZE6 40S ribosomal protein S7 OS=Mus musculus OX=10090 GN=Rps7 PE=2 SV=1 Q4FZE6 40S ribosomal protein S7 OS=Mus musculus OX=10090 GN=Rps7 PE=2 SV=1 1 2 2 0.1823 0 1 1 1 701.92548 1402.84368 1402.84183 1.31 0.00092 0/0 0 0 14627662 HCD 30 MS2 14.45907 592.3 110 57.4606 16321 16321 16313 QEplus033719.raw F4 509.2 536.4 663 572.5 642.4 630.2 611 1.92 1 FALSE 0.001702 0.02797 0.227 -250 72857 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNEAQAIETAR [K].tNEAQAIETAR.[A] N-Term(TMT6plex) 1 P61089 Ubiquitin-conjugating enzyme E2 N OS=Mus musculus OX=10090 GN=Ube2n PE=1 SV=1 P61089 Ubiquitin-conjugating enzyme E2 N OS=Mus musculus OX=10090 GN=Ube2n PE=1 SV=1 0 2 2 0.5887 0 1 1 1 716.88403 1432.76079 1432.75934 1.01 0.00073 0/0 0 0 14398080 HCD 30 MS2 24.75228 761.3 110 57.4631 16322 16322 16313 QEplus033719.raw F4 802.2 631.1 779.6 607.5 871.3 875.9 301 4.06 1 FALSE 1.14E-05 3.98E-09 1.693 -250 72865 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVESFAR [K].eVESFAR.[Q] N-Term(TMT6plex) 1 Q9D7B7 Probable glutathione peroxidase 8 OS=Mus musculus OX=10090 GN=Gpx8 PE=1 SV=1 Q9D7B7 Probable glutathione peroxidase 8 OS=Mus musculus OX=10090 GN=Gpx8 PE=1 SV=1 0 2 2 0.136 0 1 1 1 533.7915 1066.57573 1066.57304 2.52 0.00135 0/0 0 0 12644008 HCD 30 MS2 48.017 1226.6 110 57.4656 16323 16323 16313 QEplus033719.raw F4 1351.6 1007.2 1242.6 1200 1302 1256.1 193 2.5 1 FALSE 0.0002218 0.004564 0.512 -250 72871 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMGPGTPAGYGR [R].gMGPGTPAGYGR.[G] N-Term(TMT6plex) 3 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q810V5; Q8VIJ6; Q7TMH7 "Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1; Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1" 0 2 2 0.6224 0 1 1 1 675.3443 1349.68132 1349.68334 -1.49 -0.00101 0/0 0 0 19279272 HCD 30 MS2 41.23461 1095.6 81.649 57.4729 16325 16325 16324 QEplus033719.raw F4 1067.8 1139 1103.8 649.5 1692.5 920.9 182 3.39 1 FALSE 1.14E-05 2.62E-06 1.158 -250 72889 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HYEVEIR [K].hYEVEIR.[D] N-Term(TMT6plex) 5 Q9CY27 Very-long-chain enoyl-CoA reductase OS=Mus musculus OX=10090 GN=Tecr PE=1 SV=1 A0A1D5RLH3; Q52L67; G3UWE1; Q9CWN2; Q9CY27 Very-long-chain enoyl-CoA reductase (Fragment) OS=Mus musculus OX=10090 GN=Tecr PE=1 SV=1; Gpsn2 protein OS=Mus musculus OX=10090 GN=Tecr PE=1 SV=1; Very-long-chain enoyl-CoA reductase OS=Mus musculus OX=10090 GN=Tecr PE=1 SV=1; S5A_REDUCTASE domain-containing protein OS=Mus musculus OX=10090 GN=Tecr PE=2 SV=1; Very-long-chain enoyl-CoA reductase OS=Mus musculus OX=10090 GN=Tecr PE=1 SV=1 0 3 3 0.4242 0 1 1 1 392.21844 1174.64078 1174.64179 -0.86 -0.00034 0/0 0 0 10778023 HCD 30 MS2 26.23922 437.4 110 57.4804 16328 16328 16324 QEplus033719.raw F4 489.4 318.8 488.8 386.2 435.8 505.2 256 3.3 1 FALSE 3.35E-05 0.001223 0.644 -250 72901 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPQSSEQPVVHEK [K].kPQSSEQPVVHEk.[K] N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex) 11 Q8CE80 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1 Q8CE04; P51125-7; A0A338P6J9; Q921U7; P51125-6; Q8CB83; Q8C281; Q8CE80; P51125; P51125-3; P51125-2 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 7 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 6 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=2 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpastatin OS=Mus musculus OX=10090 GN=Cast PE=1 SV=2; Isoform 3 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Isoform 2 of Calpastatin OS=Mus musculus OX=10090 GN=Cast 0 4 4 0.6816 0 1 1 1 545.82086 2180.26162 2180.26423 -1.2 -0.00065 0/0 0 0 36843500 HCD 30 MS2 26.1345 761.3 43.461 57.4852 16330 16330 16324 QEplus033719.raw F4 789.9 656.2 802.1 750.1 829.8 739.9 382 4.9 1 FALSE 1.14E-05 3.69E-11 2.079 -250 72911 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNTVTPGGKPNK [K].nNTVTPGGkPNk.[T] N-Term(TMT6plex); K9(TMT6plex); K12(TMT6plex) 3 O55142 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2 O55142; Q9DC85; Q8BQV7 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1 0 3 3 0.596 0 1 1 1 638.71759 1914.13822 1914.13757 0.34 0.00022 0/0 0 0 29344394 HCD 30 MS2 50.19905 1647.2 74.078 57.4875 16331 16331 16324 QEplus033719.raw F4 1749.5 1322.4 1726.7 1424.9 1878.5 1781.2 356 2.97 1 FALSE 1.14E-05 1.94E-07 1.372 -250 72920 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLTGLNQR [K].nLTGLNQR.[R] N-Term(TMT6plex) 1 Q8K1Z0 "Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Mus musculus OX=10090 GN=Coq9 PE=1 SV=1" Q8K1Z0 "Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Mus musculus OX=10090 GN=Coq9 PE=1 SV=1" 0 2 2 0.2402 0 1 1 1 572.83594 1144.6646 1144.66359 0.88 0.00051 0/0 0 0 20099286 HCD 30 MS2 64.5238 1049.3 89.804 57.4898 16332 16332 16324 QEplus033719.raw F4 1077.2 779.8 1134.4 1057.4 1052.7 1194.5 316 1.79 1 FALSE 0.0005076 0.008061 0.438 -250 72925 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLHSDNEGSVIDDSR [R].tLHSDNEGSVIDDSR.[T] N-Term(TMT6plex) 2 O08915 AH receptor-interacting protein OS=Mus musculus OX=10090 GN=Aip PE=1 SV=1 D3YW40; O08915 AH receptor-interacting protein (Fragment) OS=Mus musculus OX=10090 GN=Aip PE=1 SV=1; AH receptor-interacting protein OS=Mus musculus OX=10090 GN=Aip PE=1 SV=1 0 3 3 0.7984 0 1 1 1 625.30811 1873.90976 1873.90891 0.45 0.00028 0/0 0 0 15279728 HCD 30 MS2 15.4516 471.1 110 57.4923 16333 16333 16324 QEplus033719.raw F4 492 405.2 505.3 381.8 560 482.5 131 6.35 1 FALSE 1.14E-05 8.74E-15 2.768 -250 72933 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVQQGTIK [K].aVQQGTIk.[C] N-Term(TMT6plex); K8(TMT6plex) 3 Q99J29 Carboxypeptidase OS=Mus musculus OX=10090 GN=Scpep1 PE=2 SV=1 Q99J29; Q920A5; Q3U5P4 Carboxypeptidase OS=Mus musculus OX=10090 GN=Scpep1 PE=2 SV=1; Retinoid-inducible serine carboxypeptidase OS=Mus musculus OX=10090 GN=Scpep1 PE=1 SV=2; Carboxypeptidase OS=Mus musculus OX=10090 GN=Scpep1 PE=2 SV=1 0 3 3 0.2733 0 1 1 1 434.94308 1302.8147 1302.81456 0.11 0.00005 0/0 0 0 11617100 HCD 30 MS2 56.23502 1230.1 110 57.4948 16334 16334 16324 QEplus033719.raw F4 1408.5 964.5 1256.3 930.4 1463 1358 484 3.22 1 FALSE 0.0002419 0.004795 0.506 -250 72943 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVHPDTGISSK [K].qVHPDTGISSk.[A] N-Term(TMT6plex); K11(TMT6plex) 18 Q64475; Q64525 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3;Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64475; Q8CGP2; Q64525; Q64524; Q8CGP1; P10854; A0JNS9; Q64478; P70696; Q9D2U9; Q8CGP2-2; Q8CBB6; Q6ZWY9; Q8CGP0; Q8VEE3; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 2-E OS=Mus musculus OX=10090 GN=H2bc21 PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Histone H2B type 3-A OS=Mus musculus OX=10090 GN=Hist3h2ba PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3; Histone H2B type 3-B OS=Mus musculus OX=10090 GN=H2bu1 PE=1 SV=3; Hist2h2bb protein OS=Mus musculus OX=10090 GN=Hist2h2bb PE=2 SV=1; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 0 2 2 0.7676 0 1 1 1 813.96497 1626.92266 1626.92154 0.68 0.00056 0/0 0 0 93947032 HCD 30 MS2 3.300525 563.1 24.275 57.5021 16336 16336 16335 QEplus033719.raw F4 559.8 649.1 546.9 382.3 997.3 243.5 396 3.4 2 FALSE 1.14E-05 3.81E-09 1.697 -250 72951 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STVALTAAR [R].sTVALTAAR.[G] N-Term(TMT6plex) 1 Q8K224 RNA cytidine acetyltransferase OS=Mus musculus OX=10090 GN=Nat10 PE=1 SV=1 Q8K224 RNA cytidine acetyltransferase OS=Mus musculus OX=10090 GN=Nat10 PE=1 SV=1 0 2 2 0.318 0 1 1 1 559.83868 1118.67009 1118.67309 -2.68 -0.0015 0/0 0 0 7188462.5 HCD 30 MS2 44.45788 1025 110 57.5046 16337 16337 16335 QEplus033719.raw F4 1061.4 827.6 1095.9 939.3 1119 1107.1 185 2.17 1 FALSE 5.44E-05 0.002148 0.592 -250 72963 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTTTPEVK [K].tTTTPEVk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 P14873; Q3UF78; B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 0 2 2 0.5372 0 1 1 1 667.9024 1334.79753 1334.79315 3.28 0.00219 0/0 0 0 33607028 HCD 30 MS2 5.523809 936.7 58.711 57.5114 16340 16340 16335 QEplus033719.raw F4 983.7 701 1015.8 790.9 996.9 1131.8 409 3.09 1 FALSE 1.14E-05 0.0003197 0.76 -250 72973 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQPQFQQMR [R].nQPQFQQMR.[Q] N-Term(TMT6plex) 5 P54728 UV excision repair protein RAD23 homolog B OS=Mus musculus OX=10090 GN=Rad23b PE=1 SV=2 Q3TJ52; P54728; Q3U041; Q3UQN3; Q6NVC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rad23b PE=2 SV=1; UV excision repair protein RAD23 homolog B OS=Mus musculus OX=10090 GN=Rad23b PE=1 SV=2; UV excision repair protein RAD23 OS=Mus musculus OX=10090 GN=Rad23b PE=2 SV=1; UV excision repair protein RAD23 OS=Mus musculus OX=10090 GN=Rad23b PE=2 SV=1; UV excision repair protein RAD23 OS=Mus musculus OX=10090 GN=Rad23b PE=2 SV=1 0 2 2 0.622 0 1 1 1 703.36395 1405.72063 1405.72078 -0.11 -0.00008 0/0 0 0 9727740 HCD 30 MS2 36.05339 513.4 110 57.5139 16341 16341 16335 QEplus033719.raw F4 498.6 441.7 553.3 441.6 584.4 560.7 210 2.91 1 FALSE 1.14E-05 4.32E-05 0.927 -250 72992 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLQEGQVTDPR [K].nLQEGQVTDPR.[G] N-Term(TMT6plex) 1 Q9JKY0 CCR4-NOT transcription complex subunit 9 OS=Mus musculus OX=10090 GN=Cnot9 PE=1 SV=1 Q9JKY0 CCR4-NOT transcription complex subunit 9 OS=Mus musculus OX=10090 GN=Cnot9 PE=1 SV=1 0 2 2 0.5734 0 1 1 1 743.39618 1485.78508 1485.78589 -0.54 -0.0004 0/0 0 0 5705102 HCD 30 MS2 0 232.3 110 57.5189 16343 16343 16335 QEplus033719.raw F4 248.4 171.1 261.8 213.9 232.2 266.4 254 2.86 1 FALSE 1.14E-05 0.0001364 0.831 -250 72996 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVQFEENGR [K].tVQFEENGR.[K] N-Term(TMT6plex) 6 Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 Q3UJP4; E9Q133; Q3U0I3; Q3TBM6; Q3U4U6; F6Q609 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; T-complex protein 1 subunit gamma (Fragment) OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=8 0 2 2 0.6655 0 1 1 1 654.84186 1308.67644 1308.67454 1.45 0.00095 0/0 0 0 5473568 HCD 30 MS2 51.30704 1019.3 110 57.5214 16344 16344 16335 QEplus033719.raw F4 1200.8 429.7 697.7 1862.8 576.3 1348.4 215 2.87 1 FALSE 1.14E-05 0.0006062 0.706 -250 73011 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIEVGGGRK [K].eIEVGGGRk.[A] N-Term(TMT6plex); K9(TMT6plex) 1 Q4FZE6 40S ribosomal protein S7 OS=Mus musculus OX=10090 GN=Rps7 PE=2 SV=1 Q4FZE6 40S ribosomal protein S7 OS=Mus musculus OX=10090 GN=Rps7 PE=2 SV=1 1 3 3 0.5864 0 1 1 1 468.28604 1402.84357 1402.84183 1.24 0.00058 0/0 0 0 105666168 HCD 30 MS2 5.889588 743.5 17.302 57.5335 16348 16348 16346 QEplus033719.raw F4 770 565.8 777 609.1 862.2 876.9 611 4.11 1 FALSE 1.14E-05 8.07E-07 1.255 -250 73017 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQVEQFAR [R].qQVEQFAR.[G] N-Term(TMT6plex) 2 Q9CZN7 "Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" Q9CZN7-2; Q9CZN7 "Isoform 2 of Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2; Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" 0 2 2 0.56 0 1 1 1 617.84113 1234.67497 1234.67415 0.67 0.00041 0/0 0 0 53162920 HCD 30 MS2 32.52043 953.2 37.406 57.5357 16349 16349 16346 QEplus033719.raw F4 956.4 927.7 1030.4 835.5 1023.2 945.9 353 3 1 FALSE 1.14E-05 0.000315 0.761 -250 73026 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NHGLYVK [R].nHGLYVk.[T] N-Term(TMT6plex); K7(TMT6plex) 4 A1A4T2 Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1 Q8BHN3-3; A1A4T2; Q3UE86; Q8BHN3 Isoform 3 of Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab; Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Gal_mutarotas_2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab PE=1 SV=1 0 3 3 0.5919 0 1 1 1 430.26447 1288.77884 1288.77778 0.83 0.00036 0/0 0 0 41036872 HCD 30 MS2 31.96376 753.3 31.168 57.5403 16351 16351 16346 QEplus033719.raw F4 751.5 667.2 849 603.3 856.6 792.1 550 3.7 1 FALSE 1.14E-05 0.0006689 0.697 -250 73038 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCVVGTKK [K].gcVVGTkk.[R] N-Term(TMT6plex); C2(Carbamidomethyl); K7(TMT6plex); K8(TMT6plex) 6 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB15; Q99N25; Q3U9L3; Q3T9U9; P27659 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Ribosomal protein L3 (Fragment) OS=Mus musculus OX=10090 GN=Rp13 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3 1 3 3 0.5123 0 1 1 1 512.6571 1535.95676 1535.95465 1.38 0.00071 0/0 0 0 29443494 HCD 30 MS2 28.44634 1138.7 53.837 57.5448 16353 16353 16346 QEplus033719.raw F4 1709.9 659.8 1207.6 1117.7 1083.8 1053.7 251 2.03 1 FALSE 0.0009447 0.01289 0.361 -250 73047 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNECFQK [K].gNEcFQk.[G] N-Term(TMT6plex); C4(Carbamidomethyl); K7(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 2 2 0.5792 0 1 1 1 670.85486 1340.70244 1340.70329 -0.64 -0.00043 0/0 0 0 24014404 HCD 30 MS2 56.74229 1573.4 71.804 57.547 16354 16354 16346 QEplus033719.raw F4 1711.5 1266.9 1621.5 1226.5 2020.2 1594 195 2.4 1 FALSE 0.001213 0.01637 0.317 -250 73056 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVAPPGGR [R].iVAPPGGR.[SA] N-Term(TMT6plex) 9 E9PWE8; O08553 Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1;Dihydropyrimidinase-related protein 2 OS=Mus musculus OX=10090 GN=Dpysl2 PE=1 SV=2 Q3TAS8; Q6P1J1; E9PWE8; O08553; P97427; Q62188; Q3TT92; Q3TXY0; Q3TY94 Amidohydro-rel domain-containing protein OS=Mus musculus OX=10090 GN=Dpysl3 PE=2 SV=1; Crmp1 protein OS=Mus musculus OX=10090 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 2 OS=Mus musculus OX=10090 GN=Dpysl2 PE=1 SV=2; Dihydropyrimidinase-related protein 1 OS=Mus musculus OX=10090 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Amidohydro-rel domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Crmp1 PE=2 SV=1; Amidohydro-rel domain-containing protein OS=Mus musculus OX=10090 GN=Crmp1 PE=2 SV=1 0 2 2 0.3812 0 1 1 1 498.31448 995.62169 995.61993 1.77 0.00088 0/0 0 0 18380614 HCD 30 MS2 30.2545 1404.3 102.97 57.5494 16355 16355 16346 QEplus033719.raw F4 1734 1246.4 1431.5 953.1 1777.5 1283.3 65 2.02 2 FALSE 0.0006216 0.009276 0.416 -250 73066 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMEQTVK [K].nMEQTVk.[DX] N-Term(TMT6plex); K7(TMT6plex) 7 Q5SX39; P13542 Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q56A77; B2RWW8; Q5SX39; Q61933; G3UW82; P13542; Q9JHR4 "Myh4 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin heavy chain (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2; Myosin heavy chain IIB (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1" 0 2 2 0.4595 0 1 1 1 654.37567 1307.74407 1307.73934 3.61 0.00236 0/0 0 0 7658905 HCD 30 MS2 43.08514 1356.2 110 57.5519 16356 16356 16346 QEplus033719.raw F4 1687.1 464.5 773.6 2737.5 667.5 1807.2 373 3.09 2 FALSE 0.0002909 0.005797 0.483 -250 73074 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPSTPNVK [R].gPSTPNVk.[N] N-Term(TMT6plex); K8(TMT6plex) 2 Q8R5H1-2 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 15 OS=Mus musculus OX=10090 GN=Usp15 Q8R5H1-2; Q8R5H1-5 Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 15 OS=Mus musculus OX=10090 GN=Usp15; Isoform 5 of Ubiquitin carboxyl-terminal hydrolase 15 OS=Mus musculus OX=10090 GN=Usp15 0 2 2 0.4449 0 1 1 1 629.38202 1257.75676 1257.75671 0.04 0.00003 0/0 0 0 7432828.5 HCD 30 MS2 26.58864 892.6 110 57.5593 16358 16358 16357 QEplus033719.raw F4 955 779.8 951.4 714.3 1020.6 934.6 343 2.63 1 FALSE 0.002148 0.04021 0.174 -250 73081 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGTDVDAANLR [R].sGTDVDAANLR.[E] N-Term(TMT6plex) 2 P70677 Caspase-3 OS=Mus musculus OX=10090 GN=Casp3 PE=1 SV=1 P70677; A0A1B0GRX1 Caspase-3 OS=Mus musculus OX=10090 GN=Casp3 PE=1 SV=1; Caspase-3 OS=Mus musculus OX=10090 GN=Casp3 PE=1 SV=1 0 2 2 0.6396 0 1 1 1 674.35626 1347.70525 1347.70657 -0.98 -0.00066 0/0 0 0 53970576 HCD 30 MS2 14.70626 925.9 42.349 57.5615 16359 16359 16357 QEplus033719.raw F4 1015.6 844.6 963.1 640.7 1105.3 986.2 269 3.94 1 FALSE 1.14E-05 2.47E-07 1.353 -250 73104 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSPYPTDVAR [R].sSPYPTDVAR.[V] N-Term(TMT6plex) 7 Q60597 "2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh PE=1 SV=3" Q60597-4; B2RXT3; Q60597-3; Q60597-2; Q60597; E9Q7L0; Z4YJV4 "Isoform 4 of 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh; Oxoglutarate dehydrogenase (succinyl-transferring) OS=Mus musculus OX=10090 GN=Ogdhl PE=1 SV=1; Isoform 3 of 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh; Isoform 2 of 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh; 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh PE=1 SV=3; Oxoglutarate dehydrogenase (succinyl-transferring) OS=Mus musculus OX=10090 GN=Ogdhl PE=1 SV=1; Oxoglutarate dehydrogenase (succinyl-transferring) OS=Mus musculus OX=10090 GN=Ogdh PE=1 SV=1" 0 2 2 0.5985 0 1 1 1 661.35187 1321.69646 1321.69495 1.14 0.00076 0/0 0 0 28370254 HCD 30 MS2 47.90183 1154.1 48.611 57.5706 16363 16363 16357 QEplus033719.raw F4 1178.8 821.5 894.7 1541.1 1342.1 1146.6 274 2.74 1 FALSE 1.14E-05 3.08E-07 1.334 -250 73110 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEDSEYYK [K].nEDSEYYk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 O09161 Calsequestrin-2 OS=Mus musculus OX=10090 GN=Casq2 PE=1 SV=3 O09161; B9EHC7; F6QYE1 Calsequestrin-2 OS=Mus musculus OX=10090 GN=Casq2 PE=1 SV=3; Calsequestrin OS=Mus musculus OX=10090 GN=Casq2 PE=2 SV=1; Calsequestrin OS=Mus musculus OX=10090 GN=Casq2 PE=1 SV=1 0 2 2 0.3285 0 1 1 1 753.38062 1505.75395 1505.75241 1.03 0.00077 0/0 0 0 26624356 HCD 30 MS2 0 1127.5 110 57.5731 16364 16364 16357 QEplus033719.raw F4 1220 158.6 1138.6 2253.2 137.9 1856.9 160 3.44 1 FALSE 1.14E-05 0.0003997 0.741 -250 73123 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAVEMK [K].qAVEMk.[N] N-Term(TMT6plex); K6(TMT6plex) 3 Q9Z204-3 Isoform 3 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc Q9Z204-5; Q9Z204-3; Q9Z0Y3 Isoform 5 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform 3 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Heterogeneous ribonucleoprotein C1/C2 (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1 0 2 2 0.2134 0 1 1 1 582.3468 1163.68633 1163.68585 0.41 0.00024 0/0 0 0 11171035 HCD 30 MS2 16.35264 1544.8 110 57.5781 16366 16366 16357 QEplus033719.raw F4 1747.8 1290.1 1481.5 1312.4 1949.9 1487.1 326 2.39 1 FALSE 0.003182 0.06287 0.106 -250 73131 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVAAPTK [K].aVAAPTk.[G] N-Term(TMT6plex); K7(TMT6plex) 9 O08784 Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 Q3TBZ3; H3BIX0; Q05BH6; F6R3V4; O08784; Q7TPZ2; Q3TAB2; Q6PFZ6; H3BL37 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Tcof1 protein OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 0 2 2 0.1211 0 1 1 1 558.36444 1115.72161 1115.71887 2.46 0.00137 0/0 0 0 10993025 HCD 30 MS2 60.67712 1492.9 110 57.5806 16367 16367 16357 QEplus033719.raw F4 1572.3 1282.5 1543.1 1187.7 1903.1 1468.9 154 1.9 1 FALSE 0.002173 0.04145 0.169 -250 73151 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLPNVQR [K].gLPNVQR.[S] N-Term(TMT6plex) 5 O88844 Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2 Q3TJ51; Q0QER9; O88844; Q5HZJ8; Q8C338 Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; IDP (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1 0 2 2 0.4009 0 1 1 1 506.80914 1012.61101 1012.61009 0.9 0.00046 0/0 0 0 54649680 HCD 30 MS2 20.30359 879.1 29.156 57.5924 16371 16371 16368 QEplus033719.raw F4 1129 710.5 874.1 808.8 922.7 829.5 65 2.22 1 FALSE 0.001266 0.01735 0.306 -250 73160 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYNVNDEK [K].gYNVNDEk.[A] N-Term(TMT6plex); K8(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 0 2 2 0.5532 0 1 1 1 698.87787 1396.74846 1396.74727 0.86 0.0006 0/0 0 0 44308100 HCD 30 MS2 26.23024 1094.4 45.038 57.5947 16372 16372 16368 QEplus033719.raw F4 1035.5 1148.7 1317.7 873.7 1144.7 1046.2 295 3.29 1 FALSE 1.14E-05 0.0003307 0.757 -250 73166 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEAPKAEPEK [K].eEAPkAEPEk.[S] N-Term(TMT6plex); K5(TMT6plex); K10(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 1 3 3 0.3755 0 1 1 1 605.68787 1815.04905 1815.04669 1.3 0.00079 0/0 0 0 40997312 HCD 30 MS2 8.458121 995.8 33.431 57.597 16373 16373 16368 QEplus033719.raw F4 908.8 940.8 1127.5 737.7 1212 1047.8 396 2.61 1 FALSE 1.14E-05 0.0009284 0.669 -250 73193 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQGSGLSSGGAGEGQGPKK [K].sQGSGLSSGGAGEGQGPkk.[Q] N-Term(TMT6plex); K18(TMT6plex); K19(TMT6plex) 2 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 B9EIU1; Q8CGC7 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4 1 3 3 0.8579 0 1 1 1 792.77399 2376.30741 2376.30861 -0.51 -0.0004 0/0 0 0 11078129 HCD 30 MS2 0 431.3 110 57.6065 16377 16377 16368 QEplus033719.raw F4 432.2 318.2 472.1 388.3 486.3 490.5 478 5.84 1 FALSE 1.14E-05 6.31E-16 4.716 -250 73203 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IEQYATR [R].iEQYATR.[L] N-Term(TMT6plex) 4 E9Q6R7 Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 O08614; A0A1W2P7C0; Q61636; E9Q6R7 Cytoskeletal protein OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1; G-utrophin (Predicted protein) OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1; Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 0 2 2 0.325 0 1 1 1 555.30981 1109.61235 1109.61524 -2.6 -0.00144 0/0 0 0 10603869 HCD 30 MS2 57.63652 1287.1 102.336 57.6089 16378 16378 16368 QEplus033719.raw F4 1441.9 988.7 1475.3 1093.7 1362.4 1360.4 160 2 1 FALSE 0.004064 0.07513 0.074 -250 73213 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YVDEASK [K].yVDEASk.[K] N-Term(TMT6plex); K7(TMT6plex) 3 Q641N3 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 Q641N3; P14131; Q5CZY9 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1; 40S ribosomal protein S16 OS=Mus musculus OX=10090 GN=Rps16 PE=1 SV=4; Rps16 protein OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 0 2 2 0.15 0 1 1 1 635.36237 1269.71745 1269.70909 6.59 0.00418 0/0 0 0 9675190 HCD 30 MS2 0 1078.6 110 57.6162 16380 16380 16379 QEplus033719.raw F4 658.5 1123.9 792.7 735.1 2196.2 965.4 294 2.6 1 FALSE 0.003835 0.07245 0.081 -250 73238 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTLTSEK [R].dTLTSEk.[S] N-Term(TMT6plex); K7(TMT6plex) 2 Q9CXW3 Calcyclin-binding protein OS=Mus musculus OX=10090 GN=Cacybp PE=1 SV=1 A0A0A6YY29; Q9CXW3 Calcyclin-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Cacybp PE=1 SV=1; Calcyclin-binding protein OS=Mus musculus OX=10090 GN=Cacybp PE=1 SV=1 0 2 2 0.337 0 1 1 1 626.36426 1251.72124 1251.71965 1.27 0.00079 0/0 0 0 59403024 HCD 30 MS2 49.48381 1211.3 24.072 57.6233 16383 16383 16379 QEplus033719.raw F4 1281.1 1008.7 1319.6 953.9 1442.9 1261.4 270 1.84 1 FALSE 0.001607 0.02571 0.24 -250 73245 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNTVTPGGKPNK [K].nNTVTPGGkPNk.[T] N-Term(TMT6plex); K9(TMT6plex); K12(TMT6plex) 3 O55142 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2 O55142; Q9DC85; Q8BQV7 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1 0 4 4 0.5378 0 1 1 1 479.29041 1914.13979 1914.13757 1.16 0.00056 0/0 0 0 57381252 HCD 30 MS2 40.98898 695.1 16.216 57.6255 16384 16384 16379 QEplus033719.raw F4 696.5 506.4 747.3 700 715.8 804.7 349 3.7 1 FALSE 3.35E-05 0.001263 0.641 -250 73251 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAGIHK [RK].vAGIHk.[KV] N-Term(TMT6plex); K6(TMT6plex) 2 P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 Q5RKP3; P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=2 SV=1; 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 0 3 3 0.4925 0 1 1 1 361.5748 1082.70984 1082.70864 1.11 0.0004 0/0 0 0 51611400 HCD 30 MS2 19.90005 694.4 23.068 57.6278 16385 16385 16379 QEplus033719.raw F4 853.2 449.5 794.7 762.9 616.1 689.9 35 3.35 1 FALSE 0.002586 0.05115 0.139 -250 73252 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAGLHK [RK].vAGLHk.[KV] N-Term(TMT6plex); K6(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 3 3 0.4925 0 1 2 2 361.5748 1082.70984 1082.70864 1.11 0.0004 0/0 0 0 51611400 HCD 30 MS2 19.90005 694.4 23.068 57.6278 16385 16385 16379 QEplus033719.raw F4 853.2 449.5 794.7 762.9 616.1 689.9 35 3.35 1 FALSE 0.002586 0.05115 0.139 -250 73269 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVHELEK [K].sVHELEk.[S] N-Term(TMT6plex); K7(TMT6plex) 4 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 0 3 3 0.3969 0 1 1 1 433.9278 1299.76883 1299.76727 1.2 0.00052 0/0 0 0 39148204 HCD 30 MS2 27.07613 756.8 25.434 57.6323 16387 16387 16379 QEplus033719.raw F4 798.8 661.9 556.9 746 1322.5 454.9 343 3.83 1 FALSE 0.0001603 0.003652 0.537 -250 73278 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVPLDER [R].kVPLDER.[I] N-Term(TMT6plex); K1(TMT6plex) 2 Q8R1F1 Protein Niban 2 OS=Mus musculus OX=10090 GN=Niban2 PE=1 SV=2 Q8R1F1; A2ARS6 Protein Niban 2 OS=Mus musculus OX=10090 GN=Niban2 PE=1 SV=2; Protein Niban 2 (Fragment) OS=Mus musculus OX=10090 GN=Niban2 PE=1 SV=8 1 3 3 0.2996 0 1 1 1 438.94363 1314.81635 1314.81456 1.36 0.0006 0/0 0 0 33090322 HCD 30 MS2 29.75815 901.4 35.478 57.6346 16388 16388 16379 QEplus033719.raw F4 933.8 805.9 996.3 665.8 1069.3 937.4 225 2.67 1 FALSE 0.003261 0.06356 0.105 -250 73288 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAQAQQEFK [K].nAQAQQEFk.[N] N-Term(TMT6plex); K9(TMT6plex) 8 Q3UL32 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnajc7 PE=2 SV=1 Q3UL32; A0A6I8MWZ9; A0A6I8MX00; A2A5E1; A0A6I8MWZ1; A0A6I8MWX8; Q9QYI3; A0A6I8MWY7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnajc7 PE=2 SV=1; DnaJ homolog subfamily C member 7 (Fragment) OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=2; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=2; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1 0 2 2 0.543 0 1 1 1 761.42584 1521.84441 1521.84256 1.21 0.00092 0/0 0 0 8614623 HCD 30 MS2 0 523.8 110 57.6371 16389 16389 16379 QEplus033719.raw F4 544.5 425.6 670.8 359.2 566.3 576.3 445 4.42 1 FALSE 1.14E-05 7.29E-07 1.263 -250 73295 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQGVMVGMGQK [R-].hQGVmVGMGQk.[D] N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3UCF8; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 3 3 0.3736 0 1 1 1 549.30237 1645.89255 1645.89184 0.43 0.00024 0/0 0 0 41679320 HCD 30 MS2 4.861297 547.9 31.234 57.6444 16391 16391 16390 QEplus033719.raw F4 593.3 375.2 633.9 529.7 494.5 660.5 394 5.46 4 FALSE 1.14E-05 1.76E-09 1.76 -250 73302 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIEDDPK [R].nIEDDPk.[M] N-Term(TMT6plex); K7(TMT6plex) 5 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; Q62411; A0A571BF46; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 2 2 0.2735 0 1 1 1 644.86121 1288.71514 1288.7149 0.18 0.00012 0/0 0 0 10033389 HCD 30 MS2 68.6118 1420.1 110 57.6469 16392 16392 16390 QEplus033719.raw F4 1474.1 822.7 1380.3 1722.4 1105.9 2015 354 2.23 1 FALSE 0.004914 0.08596 0.045 -250 73310 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVGAYSK [R].aVGAYSk.[S] N-Term(TMT6plex); K7(TMT6plex) 1 P15636 SWISS-PROT:P15636 Protease I precursor Lysyl endopeptidase Achromobacter lyticus. P15636 SWISS-PROT:P15636 Protease I precursor Lysyl endopeptidase Achromobacter lyticus. 0 2 2 0.4536 0 1 1 1 577.35474 1153.7022 1153.69813 3.52 0.00203 0/0 0 0 305242240 HCD 30 MS2 15.30492 1045.5 4.033 57.6492 16393 16393 16390 QEplus033719.raw F4 1552.1 753.5 930.1 787.6 1329.5 920 152 2.8 1 TRUE 0.003058 0.0597 0.115 -250 73357 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILEENNRK [R].iLEENNRk.[I] N-Term(TMT6plex); K8(TMT6plex) 1 Q3UL36 Arginine and glutamate-rich protein 1 OS=Mus musculus OX=10090 GN=Arglu1 PE=1 SV=2 Q3UL36 Arginine and glutamate-rich protein 1 OS=Mus musculus OX=10090 GN=Arglu1 PE=1 SV=2 1 3 3 0.233 0 1 1 1 491.96533 1473.88144 1473.87895 1.69 0.00083 0/0 0 0 10191514 HCD 30 MS2 47.50139 1574.4 107.166 57.6652 16400 16400 16390 QEplus033719.raw F4 2149.2 1137.9 1549.2 1157.2 1606.9 1845.9 476 1.76 1 FALSE 0.004181 0.07653 0.071 -250 73367 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEITCK [K].aEITck.[D] N-Term(TMT6plex); C5(Carbamidomethyl); K6(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.1674 0 1 1 1 590.34491 1179.68254 1179.68077 1.51 0.00089 0/0 0 0 27016534 HCD 30 MS2 25.85419 1124.1 32.137 57.6725 16402 16402 16401 QEplus033719.raw F4 1418.5 672.6 1099.2 1161.1 1129.2 1264.3 369 2.15 1 FALSE 0.004641 0.0821 0.056 -250 73383 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YGASLRK [R].yGASLRk.[M] N-Term(TMT6plex); K7(TMT6plex) 5 Q5M9N6 Rpl37a protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1 Q5M9N6; Q4VAF2; Q9CYW3; Q3U8M3; Q3TLC1 Rpl37a protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1; Ribosomal protein L37a OS=Mus musculus OX=10090 GN=Rpl37a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1 1 3 3 0.2563 0 1 1 1 418.26453 1252.77903 1252.77778 1 0.00042 0/0 0 0 61748248 HCD 30 MS2 27.85835 845.2 15.989 57.6795 16405 16405 16401 QEplus033719.raw F4 894 747.8 918.2 691 994.9 825.2 215 1.99 1 FALSE 0.002405 0.04746 0.15 -250 73392 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALVDGPCTR [R].aLVDGPcTR.[V] N-Term(TMT6plex); C7(Carbamidomethyl) 3 Q9CR57; Q569Z0 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14 PE=1 SV=3;60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14-ps1 PE=2 SV=1 Q9CR57; Q569Z0; Q9CWK0 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14 PE=1 SV=3; 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14-ps1 PE=2 SV=1; 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14 PE=2 SV=1 0 2 2 0.5488 0 1 1 1 609.32977 1217.65227 1217.65097 1.06 0.00065 0/0 0 0 29973326 HCD 30 MS2 15.68506 786.9 37.235 57.6817 16406 16406 16401 QEplus033719.raw F4 971.5 613.2 806.4 754.8 775.3 800 240 3.28 2 FALSE 1.14E-05 0.0003142 0.762 -250 73401 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQFEAQK [K].sQFEAQk.[I] N-Term(TMT6plex); K7(TMT6plex) 4 O88844 Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2 Q3TJ51; O88844; Q5HZJ8; Q8C338 Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1 0 2 2 0.5242 0 1 1 1 648.37213 1295.73699 1295.73597 0.78 0.00051 0/0 0 0 27862580 HCD 30 MS2 25.67452 1293.9 56.947 57.684 16407 16407 16401 QEplus033719.raw F4 1364.7 1227.5 1404.2 1033.8 1403.3 1330.1 402 2.69 1 FALSE 0.0005556 0.008463 0.431 -250 73410 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NITPAK [K].nITPAk.[V] N-Term(TMT6plex); K6(TMT6plex) 7 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30; Q9CT46 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 2 2 0.169 0 1 1 1 551.35559 1101.70391 1101.70322 0.63 0.00034 0/0 0 0 27197292 HCD 30 MS2 21.50549 1201 44.788 57.6863 16408 16408 16401 QEplus033719.raw F4 1468.8 1044.7 1145.9 846.1 1684.6 1015.9 187 2.13 1 FALSE 0.005545 0.09372 0.024 -250 73428 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DPNASPGDAGEQAIR [R].dPNASPGDAGEQAIR.[Q] N-Term(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 2 2 0.7705 0 1 1 1 863.93048 1726.85369 1726.85576 -1.2 -0.00104 0/0 0 0 4861355.5 HCD 30 MS2 0 161.1 110 57.7036 16414 16414 16412 QEplus033719.raw F4 166.2 138.5 178.1 149.6 143.7 190.7 163 4.4 1 FALSE 1.14E-05 7.31E-15 2.782 -250 73458 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIPAPEEER [R].gIPAPEEER.[T] N-Term(TMT6plex) 2 Q8BK64 Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Mus musculus OX=10090 GN=Ahsa1 PE=1 SV=2 Q8BK64; Q3TL79 Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Mus musculus OX=10090 GN=Ahsa1 PE=1 SV=2; Aha1_N domain-containing protein OS=Mus musculus OX=10090 GN=Ahsa1 PE=2 SV=1 0 2 2 0.0404 0 1 1 1 613.83685 1226.66643 1226.65783 7.01 0.0043 0/0 0 0 34964476 HCD 30 MS2 12.75258 1216.8 49.452 57.7149 16419 16419 16412 QEplus033719.raw F4 1276.2 863.7 1301.5 1336.4 1060 1463 208 2.23 1 FALSE 0.004237 0.07819 0.066 -250 73466 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTNLSEDTR [R].vTNLSEDTR.[E] N-Term(TMT6plex) 2 Q9Z1D1 Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=1 SV=2 Q9Z1D1; Q3THA0 Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=1 SV=2; Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=2 SV=1 0 2 2 0.5069 0 1 1 1 632.34167 1263.67607 1263.67421 1.47 0.00093 0/0 0 0 31813526 HCD 30 MS2 31.03611 966.2 49.972 57.7172 16420 16420 16412 QEplus033719.raw F4 1000.3 814.1 1032.8 750.3 1176.3 1023.5 273 2.88 1 FALSE 1.14E-05 4.12E-05 0.931 -250 73486 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGDSLLR [R].eGDSLLR.[T] N-Term(TMT6plex) 3 Q3UPL0 Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2 Q3UPL0; Q3UPL0-2; S4R2A9 Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2; Isoform 2 of Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a; Protein transport protein Sec31A (Fragment) OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=1 0 2 2 0.2639 0 1 1 1 509.78998 1018.57268 1018.57304 -0.35 -0.00018 0/0 0 0 16155164 HCD 30 MS2 44.09503 1253 78.644 57.7217 16422 16422 16412 QEplus033719.raw F4 1347.3 1047.9 1420.5 980.2 1342.5 1379.3 230 2.16 1 FALSE 0.001584 0.02417 0.25 -250 73494 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASINPVTGR [K].aSINPVTGR.[V] N-Term(TMT6plex) 2 Q3TIR3 Synembryn-A OS=Mus musculus OX=10090 GN=Ric8a PE=1 SV=2 Q3TIR3; A0A1B0GSI8 Synembryn-A OS=Mus musculus OX=10090 GN=Ric8a PE=1 SV=2; Synembryn-A (Fragment) OS=Mus musculus OX=10090 GN=Ric8a PE=1 SV=1 0 2 2 0.4634 0 1 1 1 572.33826 1143.66924 1143.66834 0.79 0.00045 0/0 0 0 11326976 HCD 30 MS2 47.06754 1282.4 110 57.729 16424 16424 16423 QEplus033719.raw F4 1289.7 1018.3 1421.6 1113.5 1336.4 1514.9 276 2.05 1 FALSE 3.35E-05 0.001212 0.645 -250 73501 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQVEPEDPK [K].sQVEPEDPk.[S] N-Term(TMT6plex); K9(TMT6plex) 4 Q80UU6 Opioid growth factor receptor OS=Mus musculus OX=10090 GN=Ogfr PE=2 SV=1 Q80UU6; Q3UF10; Q99PG2-2; Q99PG2 Opioid growth factor receptor OS=Mus musculus OX=10090 GN=Ogfr PE=2 SV=1; OGFr_N domain-containing protein OS=Mus musculus OX=10090 GN=Ogfr PE=2 SV=1; Isoform 2 of Opioid growth factor receptor OS=Mus musculus OX=10090 GN=Ogfr; Opioid growth factor receptor OS=Mus musculus OX=10090 GN=Ogfr PE=1 SV=1 0 2 2 0.6082 0 1 1 1 743.91339 1486.81951 1486.81534 2.8 0.00208 0/0 0 0 5449096.5 HCD 30 MS2 0 343.7 110 57.7315 16425 16425 16423 QEplus033719.raw F4 343.2 290.7 371.2 288.9 410.5 357.4 375 2.91 1 FALSE 1.14E-05 3.80E-05 0.937 -250 73525 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTMDPALR [R].gTMDPALR.[E] N-Term(TMT6plex) 2 Q9EPL8 Importin-7 OS=Mus musculus OX=10090 GN=Ipo7 PE=1 SV=2 Q9EPL8; A0A140LHD0 Importin-7 OS=Mus musculus OX=10090 GN=Ipo7 PE=1 SV=2; Importin-7 OS=Mus musculus OX=10090 GN=Ipo7 PE=1 SV=1 0 2 2 0.0789 0 1 1 1 545.30072 1089.59416 1089.5924 1.62 0.00088 0/0 0 0 38721176 HCD 30 MS2 55.31069 1392.8 22.38 57.7383 16428 16428 16423 QEplus033719.raw F4 1644 860.4 1299.4 1681.2 1437.6 1434.5 318 1.9 1 FALSE 0.004832 0.08453 0.049 -250 73549 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSYVGDEAQSK [KR].dSYVGDEAQSk.[RT] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; Q8CF71; P63268; Q61274; V9GXQ2; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Predicted gene 17087 OS=Mus musculus OX=10090 GN=Gm17087 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 2 2 0.6054 0 1 1 1 828.92786 1656.84844 1656.8481 0.2 0.00017 0/0 0 0 7714760.5 HCD 30 MS2 0 410.4 110 57.7458 16431 16431 16423 QEplus033719.raw F4 448 296.5 430.9 291.2 502.7 492.8 232 4.84 4 FALSE 1.14E-05 2.02E-10 1.939 -250 73559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MAAEALR [R-].mAAEALR.[N] N-Term(TMT6plex) 5 Q5SX40 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1 Q9ESW6; Q5SX40; G3UW82; B2RWX0; Q3TT35 "Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1" 0 2 2 0.1587 0 1 1 1 495.78442 990.56157 990.56037 1.22 0.0006 0/0 0 0 25521556 HCD 30 MS2 36.47638 982.5 30.577 57.7481 16432 16432 16423 QEplus033719.raw F4 1112.2 473.3 812.4 1518.1 681 1298.1 250 2.08 1 FALSE 0.001335 0.01851 0.295 -250 73568 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YLPGHK [K].yLPGHk.[L] N-Term(TMT6plex); K6(TMT6plex) 4 E0CXN5; Q3ULJ0 Glycerol-3-phosphate dehydrogenase [NAD(+)] OS=Mus musculus OX=10090 GN=Gpd1 PE=1 SV=1;Glycerol-3-phosphate dehydrogenase 1-like protein OS=Mus musculus OX=10090 GN=Gpd1l PE=1 SV=2 E0CXN5; Q3ULJ0-2; P13707; Q3ULJ0 "Glycerol-3-phosphate dehydrogenase [NAD(+)] OS=Mus musculus OX=10090 GN=Gpd1 PE=1 SV=1; Isoform 2 of Glycerol-3-phosphate dehydrogenase 1-like protein OS=Mus musculus OX=10090 GN=Gpd1l; Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Mus musculus OX=10090 GN=Gpd1 PE=1 SV=3; Glycerol-3-phosphate dehydrogenase 1-like protein OS=Mus musculus OX=10090 GN=Gpd1l PE=1 SV=2" 0 3 3 0.5489 0 1 1 1 391.57855 1172.7211 1172.7192 1.62 0.00063 0/0 0 0 19125646 HCD 30 MS2 47.41614 905.1 66.511 57.7503 16433 16433 16423 QEplus033719.raw F4 1007.3 554.7 821.6 891 961.1 1194.8 282 2.66 2 FALSE 0.0002909 0.005953 0.48 -250 73581 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YSNAFTNR [R].ySNAFTNR.[I] N-Term(TMT6plex) 4 A2ADH1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit MAGT1 OS=Mus musculus OX=10090 GN=Magt1 PE=1 SV=1 A2ADH1; Q9CQY5-2; Q9CQY5-3; Q9CQY5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit MAGT1 OS=Mus musculus OX=10090 GN=Magt1 PE=1 SV=1; Isoform 2 of Magnesium transporter protein 1 OS=Mus musculus OX=10090 GN=Magt1; Isoform 3 of Magnesium transporter protein 1 OS=Mus musculus OX=10090 GN=Magt1; Magnesium transporter protein 1 OS=Mus musculus OX=10090 GN=Magt1 PE=1 SV=1 0 2 2 0.6824 0 1 1 1 601.31274 1201.61821 1201.6163 1.59 0.00095 0/0 0 0 10330687 HCD 30 MS2 39.90182 945.2 110 57.7602 16436 16436 16434 QEplus033719.raw F4 791.2 862.2 1081.4 857.4 996.1 1083 98 2.33 1 FALSE 7.59E-05 0.002856 0.563 -250 73587 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVEEEPGLR [R].eVEEEPGLR.[S] N-Term(TMT6plex) 2 Q9JKR6 Hypoxia up-regulated protein 1 OS=Mus musculus OX=10090 GN=Hyou1 PE=1 SV=1 Q8VCI2; Q9JKR6 Hyou1 protein OS=Mus musculus OX=10090 GN=Hyou1 PE=2 SV=1; Hypoxia up-regulated protein 1 OS=Mus musculus OX=10090 GN=Hyou1 PE=1 SV=1 0 2 2 0.2857 0 1 1 1 643.84406 1286.68083 1286.67896 1.46 0.00094 0/0 0 0 28028408 HCD 30 MS2 25.23471 973.6 65.486 57.7625 16437 16437 16434 QEplus033719.raw F4 950.2 814.1 1103 871.5 1070.5 1032.5 212 3.36 1 FALSE 1.14E-05 5.70E-06 1.094 -250 73622 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGALCEENMR [K].eGALcEENMR.[G] N-Term(TMT6plex); C5(Carbamidomethyl) 17 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q3TSK4; Q8C153; P58252; Q61509; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3TPG2; Q3UZ14; Q99LT6; Q3TLB1; Q3TWX1; Q3TX47 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Elongation factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 0 2 2 0.5195 0 1 1 1 719.33795 1437.66863 1437.66637 1.57 0.00113 0/0 0 0 14008568 HCD 30 MS2 0 773.8 110 57.7718 16441 16441 16434 QEplus033719.raw F4 828 587.3 881.2 671.9 800.6 873.9 43 4.1 1 FALSE 1.14E-05 2.34E-06 1.167 -250 73636 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CVAALTR [K].cVAALTR.[A] N-Term(TMT6plex); C1(Carbamidomethyl) 1 Q6ZQ38 Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2 Q6ZQ38 Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2 0 2 2 0.3682 0 1 1 1 510.29715 1019.58702 1019.58692 0.1 0.00005 0/0 0 0 8958857 HCD 30 MS2 59.31034 1626.7 96.356 57.7763 16443 16443 16434 QEplus033719.raw F4 1860.6 1332.4 1807.3 1303 1703.6 1753.4 185 2.01 1 FALSE 0.001658 0.02747 0.23 -250 73646 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDTQVADVTTSR [K].eDTQVADVTTSR.[C] N-Term(TMT6plex) 4 Q3UHT6 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1 Q3UHT6; P19096; Q3TB22; A0A0U1RNJ1 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2; Fatty acid synthase (Fragment) OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=1 0 2 2 0.6516 0 1 1 1 775.89746 1550.78765 1550.78595 1.1 0.00085 0/0 0 0 4343284 HCD 30 MS2 0 254.3 110 57.7788 16444 16444 16434 QEplus033719.raw F4 268.3 219.8 259.4 208.4 291.2 278.9 194 3.99 1 FALSE 1.14E-05 1.85E-10 1.946 -250 73652 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLCGMGGPR [R].gLcGMGGPR.[T] N-Term(TMT6plex); C3(Carbamidomethyl) 2 Q99LD8 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1" Q99LD8; O08972 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1; Dimethylargininase OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1" 0 2 2 0.602 0 1 1 1 567.2915 1133.57573 1133.5757 0.03 0.00002 0/0 0 0 8732070 HCD 30 MS2 33.25863 1063.5 110 57.7861 16446 16446 16445 QEplus033719.raw F4 1115.8 836.7 1137.2 979.8 1064.4 1246.9 136 2.01 1 FALSE 0.0009824 0.01311 0.357 -250 73669 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVAGEPGRDGTPGGPGIR [R].gVAGEPGRDGTPGGPGIR.[G] N-Term(TMT6plex) 7 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 1 3 3 0.5229 0 1 1 1 627.00507 1879.00064 1878.99834 1.23 0.00077 0/0 0 0 44532364 HCD 30 MS2 39.78363 820.2 37.12 57.7977 16451 16451 16445 QEplus033719.raw F4 742.5 776.2 956.1 580.9 954 911.4 372 3.5 1 FALSE 1.14E-05 1.23E-07 1.41 -250 73713 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AFHNEAQVNPERK [R].aFHNEAQVNPERk.[N] N-Term(TMT6plex); K13(TMT6plex) 3 P11983 T-complex protein 1 subunit alpha OS=Mus musculus OX=10090 GN=Tcp1 PE=1 SV=3 P11983-2; P11983; W0TYI4 Isoform 2 of T-complex protein 1 subunit alpha OS=Mus musculus OX=10090 GN=Tcp1; T-complex protein 1 subunit alpha OS=Mus musculus OX=10090 GN=Tcp1 PE=1 SV=3; T-complex protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Tcp1 PE=3 SV=1 1 4 4 0.6872 0 1 1 1 500.27905 1998.09438 1998.09213 1.13 0.00056 0/0 0 0 118877488 HCD 30 MS2 24.52837 476.1 7.638 57.8185 16459 16459 16456 QEplus033719.raw F4 497.5 369.5 547.6 402.4 532.8 506.6 412 4.7 1 FALSE 1.14E-05 5.15E-07 1.292 -250 73724 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVIAVAR [R].qVIAVAR.[T] N-Term(TMT6plex) 4 Q9QXB9; P32233 Developmentally-regulated GTP-binding protein 2 OS=Mus musculus OX=10090 GN=Drg2 PE=1 SV=1;Developmentally-regulated GTP-binding protein 1 OS=Mus musculus OX=10090 GN=Drg1 PE=1 SV=1 Q9QXB9; P32233; Q8BNS0; Q8CHR8 Developmentally-regulated GTP-binding protein 2 OS=Mus musculus OX=10090 GN=Drg2 PE=1 SV=1; Developmentally-regulated GTP-binding protein 1 OS=Mus musculus OX=10090 GN=Drg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Drg1 PE=2 SV=1; Developmentally regulated GTP binding protein 1 OS=Mus musculus OX=10090 GN=Drg1 PE=2 SV=1 0 2 2 0.1637 0 1 1 1 493.32257 985.63786 985.63558 2.32 0.00114 0/0 0 0 23509158 HCD 30 MS2 53.77993 870.8 26.857 57.823 16461 16461 16456 QEplus033719.raw F4 915.3 703.7 965 634.6 1083 923.5 97 2.26 2 FALSE 0.001028 0.01337 0.354 -250 73734 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RHLTGEFEK [K].rHLTGEFEk.[EK] N-Term(TMT6plex); K9(TMT6plex) 4 Q3ULW0 GTP-binding nuclear protein Ran OS=Mus musculus OX=10090 GN=Ran PE=2 SV=1 A6H622; Q3ULW0; Q14AA6; P62827 GTP-binding nuclear protein Ran OS=Mus musculus OX=10090 GN=Rasl2-9 PE=2 SV=1; GTP-binding nuclear protein Ran OS=Mus musculus OX=10090 GN=Ran PE=2 SV=1; GTP-binding nuclear protein Ran OS=Mus musculus OX=10090 GN=1700009N14Rik PE=1 SV=1; GTP-binding nuclear protein Ran OS=Mus musculus OX=10090 GN=Ran PE=1 SV=3 1 4 4 0.5574 0 1 1 1 394.48233 1574.90749 1574.9055 1.27 0.0005 0/0 0 0 12364863 HCD 30 MS2 22.87468 607.6 60.226 57.8252 16462 16462 16456 QEplus033719.raw F4 858.9 550.8 638.2 442.2 685.1 470.1 469 2.96 1 FALSE 3.35E-05 0.001232 0.643 -250 73749 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VFHAAGAK [K].vFHAAGAk.[L] N-Term(TMT6plex); K8(TMT6plex) 3 I7DM66 PexRAP OS=Mus musculus OX=10090 GN=Dhrs7b PE=2 SV=1 I7DM66; Q99J47-2; Z4YKT6 PexRAP OS=Mus musculus OX=10090 GN=Dhrs7b PE=2 SV=1; Isoform 2 of Dehydrogenase/reductase SDR family member 7B OS=Mus musculus OX=10090 GN=Dhrs7b; Dehydrogenase/reductase SDR family member 7B OS=Mus musculus OX=10090 GN=Dhrs7b PE=1 SV=1 0 3 3 0.4842 0 1 1 1 420.26184 1258.77097 1258.76721 2.98 0.00125 0/0 0 0 6737183.5 HCD 30 MS2 14.09954 751 110 57.8302 16464 16464 16456 QEplus033719.raw F4 789.3 541.4 769.1 700.9 885.3 819.7 317 3.16 1 FALSE 0.0006216 0.009313 0.416 -250 73754 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESVVDYCNR [R].eSVVDYcNR.[L] N-Term(TMT6plex); C7(Carbamidomethyl) 3 Q8BU14 Translocation protein SEC62 OS=Mus musculus OX=10090 GN=Sec62 PE=1 SV=1 Q05DA2; Q8BU14; Q9CRY0 Translocation protein SEC62 (Fragment) OS=Mus musculus OX=10090 GN=Sec62 PE=2 SV=1; Translocation protein SEC62 OS=Mus musculus OX=10090 GN=Sec62 PE=1 SV=1; Translocation protein SEC62 (Fragment) OS=Mus musculus OX=10090 GN=Sec62 PE=2 SV=1 0 2 2 0.7465 0 1 1 1 685.83044 1370.65361 1370.65718 -2.6 -0.00178 0/0 0 0 6628943.5 HCD 30 MS2 20.74744 542.5 110 57.8327 16465 16465 16456 QEplus033719.raw F4 525.7 472.9 623.5 484.7 596 552.4 52 2.84 1 FALSE 1.14E-05 0.0002188 0.792 -250 73758 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVLMER [KR].sVLMER.[LV] N-Term(TMT6plex) 8 D3YXK2; Q80YR5 Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=2;Scaffold attachment factor B2 OS=Mus musculus OX=10090 GN=Safb2 PE=1 SV=2 Q3UGR1; D3YXK2; D6RHP9; D6RJ78; Q6A0C0; B1AR51; S4R1M2; Q80YR5 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Safb2 PE=2 SV=1; Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=2; Scaffold attachment factor B2 OS=Mus musculus OX=10090 GN=Safb2 PE=1 SV=1; Scaffold attachment factor B2 OS=Mus musculus OX=10090 GN=Safb2 PE=1 SV=1; MKIAA0138 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0138 PE=4 SV=1; Dynein, axonemal, heavy chain 9 OS=Mus musculus OX=10090 GN=Dnah9 PE=1 SV=1; Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=1; Scaffold attachment factor B2 OS=Mus musculus OX=10090 GN=Safb2 PE=1 SV=2" 0 2 2 0.4257 0 1 1 1 482.2785 963.54973 963.54947 0.27 0.00013 0/0 0 0 6315122.5 HCD 30 MS2 47.52843 1270.2 110 57.8352 16466 16466 16456 QEplus033719.raw F4 1609 991 1366.1 1008.9 1289 1357.3 185 2.02 2 FALSE 0.002249 0.04388 0.161 -250 73768 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASINPVTGR [K].aSINPVTGR.[V] N-Term(TMT6plex) 2 Q3TIR3 Synembryn-A OS=Mus musculus OX=10090 GN=Ric8a PE=1 SV=2 Q3TIR3; A0A1B0GSI8 Synembryn-A OS=Mus musculus OX=10090 GN=Ric8a PE=1 SV=2; Synembryn-A (Fragment) OS=Mus musculus OX=10090 GN=Ric8a PE=1 SV=1 0 2 2 0.2955 0 1 1 1 572.34106 1143.67485 1143.66834 5.7 0.00326 0/0 0 0 3584452.5 HCD 30 MS2 67.2318 916.6 110 57.8425 16468 16468 16467 QEplus033719.raw F4 909.9 742.8 967.9 805.1 1046.1 1027.9 263 1.32 1 FALSE 0.001607 0.02531 0.242 -250 73775 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENTLHGYGTQK [K].eNTLHGYGTQk.[S] N-Term(TMT6plex); K11(TMT6plex) 8 Q99KW3 TRIO and F-actin-binding protein OS=Mus musculus OX=10090 GN=Triobp PE=1 SV=3 G5E8W1; Q99KW3-1; A0A2U3TZ82; Q99KW3-2; Q99KW3; Q99KW3-4; Q3U2M9; A0A2R8VI29 TRIO and F-actin-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Triobp PE=1 SV=2; Isoform 1 of TRIO and F-actin-binding protein OS=Mus musculus OX=10090 GN=Triobp; TRIO and F-actin-binding protein OS=Mus musculus OX=10090 GN=Triobp PE=1 SV=1; Isoform 2 of TRIO and F-actin-binding protein OS=Mus musculus OX=10090 GN=Triobp; TRIO and F-actin-binding protein OS=Mus musculus OX=10090 GN=Triobp PE=1 SV=3; Isoform 4 of TRIO and F-actin-binding protein OS=Mus musculus OX=10090 GN=Triobp; PH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Triobp PE=2 SV=1; TRIO and F-actin-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Triobp PE=1 SV=1 0 3 3 0.6184 0 1 1 1 569.31384 1705.92698 1705.92735 -0.22 -0.00013 0/0 0 0 1801948.875 HCD 30 MS2 0 572.2 110 57.845 16469 16469 16467 QEplus033719.raw F4 581 456.6 582.8 499.5 690.8 622.5 390 4.14 1 FALSE 1.14E-05 6.11E-06 1.088 -250 73782 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTIVTSYNR [K].nTIVTSYNR.[N] N-Term(TMT6plex) 1 Q99KI0 "Aconitate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Aco2 PE=1 SV=1" Q99KI0 "Aconitate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Aco2 PE=1 SV=1" 0 2 2 0.5898 0 1 1 1 648.85767 1296.70806 1296.71093 -2.22 -0.00144 0/0 0 0 76840280 HCD 30 MS2 31.14933 946.6 19.677 57.8473 16470 16470 16467 QEplus033719.raw F4 933.4 777.4 1037 999.1 883.9 1049 318 3.34 1 FALSE 1.14E-05 1.05E-05 1.043 -250 73804 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQTANEVK [K].vQTANEVk.[Q] N-Term(TMT6plex); K8(TMT6plex) 1 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 0 2 2 0.5531 0 1 1 1 673.90625 1346.80522 1346.80439 0.62 0.00042 0/0 0 0 31121696 HCD 30 MS2 21.16879 1003.6 69.72 57.8563 16474 16474 16467 QEplus033719.raw F4 1124.2 669.6 1012.3 1087.5 937.6 1190.4 555 3.58 1 FALSE 1.14E-05 6.98E-05 0.887 -250 73814 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGGNRFEPYSNPTK [K].rGGNRFEPYSNPTk.[R] N-Term(TMT6plex); K14(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; A0A3Q4EH91; Q9D0E1-2; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 2 4 4 0.472 0 1 1 1 521.03839 2081.13173 2081.12924 1.2 0.00062 0/0 0 0 24342906 HCD 30 MS2 7.91045 573.4 71.427 57.8586 16475 16475 16467 QEplus033719.raw F4 628.8 492.5 698.6 490.4 497.1 632.8 439 4.28 1 FALSE 1.14E-05 0.0002956 0.767 -250 73821 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTSVVDSEPVR [R].nTSVVDSEPVR.[F] N-Term(TMT6plex) 8 A0A0G2JEX1 Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1 A0A0G2JEX1; Q7TPW1; G4W8R3; A0A0G2JG59; G4W8R2; G4W8R4; A0A0G2JFD8; A0A0G2JGI1 Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=3; Nexilin beta OS=Mus musculus OX=10090 GN=Nexn PE=2 SV=1; Nexilin (Fragment) OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin alpha OS=Mus musculus OX=10090 GN=Nexn PE=2 SV=1; Nexilin gamma OS=Mus musculus OX=10090 GN=Nexn PE=2 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1 0 2 2 0.7337 0 1 1 1 716.38513 1431.76299 1431.76409 -0.77 -0.00055 0/0 0 0 14556573 HCD 30 MS2 0 451 110 57.8611 16476 16476 16467 QEplus033719.raw F4 505.6 290.4 496.8 440.1 382.8 590.1 289 3.68 1 FALSE 1.14E-05 8.00E-09 1.636 -250 73830 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSSDPTCVEK [K].tSSDPTcVEk.[E] N-Term(TMT6plex); C7(Carbamidomethyl); K10(TMT6plex) 1 Q6P5F9 Exportin-1 OS=Mus musculus OX=10090 GN=Xpo1 PE=1 SV=1 Q6P5F9 Exportin-1 OS=Mus musculus OX=10090 GN=Xpo1 PE=1 SV=1 0 2 2 0.2644 0 1 1 1 791.41364 1581.81999 1581.81944 0.35 0.00028 0/0 0 0 15637170 HCD 30 MS2 8.266869 413.4 110 57.8707 16479 16479 16478 QEplus033719.raw F4 392.7 412.2 424 267.3 593.6 390.8 271 2.95 1 FALSE 1.14E-05 0.0002252 0.789 -250 73835 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVEQCTCPPGYR [R].eVEQcTcPPGYR.[G] N-Term(TMT6plex); C5(Carbamidomethyl); C7(Carbamidomethyl) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.8143 0 1 1 1 862.90247 1724.79766 1724.79336 2.49 0.00215 0/0 0 0 10632434 HCD 30 MS2 0 374.5 110 57.8732 16480 16480 16478 QEplus033719.raw F4 343.2 366.9 515.2 411.3 243.8 366.5 45 4.47 2 FALSE 1.14E-05 1.46E-08 1.586 -250 73850 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVPAGPK [K].kVPAGPk.[T] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 4 P14148 60S ribosomal protein L7 OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=2 P14148; Q3TK73; Q3UBI6; F6XI62 60S ribosomal protein L7 OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl7 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl7 PE=2 SV=1; 60S ribosomal protein L7 (Fragment) OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=1 1 3 3 0.1309 0 1 1 1 461.9816 1383.93024 1383.92908 0.84 0.00039 0/0 0 0 56292504 HCD 30 MS2 50.19948 1185.3 22.12 57.8778 16482 16482 16478 QEplus033719.raw F4 1413.5 870.4 1322 1141.9 1190.9 1173.1 26 2.75 1 FALSE 0.0002719 0.005529 0.489 -250 73860 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGHSVTAAK [R].lGHSVTAAk.[Q] N-Term(TMT6plex); K9(TMT6plex) 3 Q91V61 Sideroflexin-3 OS=Mus musculus OX=10090 GN=Sfxn3 PE=1 SV=1 Q3U4F0; Q91V61-2; Q91V61 Sideroflexin-3 OS=Mus musculus OX=10090 GN=Sfxn3 PE=1 SV=1; Isoform 2 of Sideroflexin-3 OS=Mus musculus OX=10090 GN=Sfxn3; Sideroflexin-3 OS=Mus musculus OX=10090 GN=Sfxn3 PE=1 SV=1 0 3 3 0.1198 0 1 1 1 447.94638 1341.82459 1341.82546 -0.65 -0.00029 0/0 0 0 39526688 HCD 30 MS2 51.11306 863.6 19.978 57.88 16483 16483 16478 QEplus033719.raw F4 1543.1 514.3 970.1 601.9 499.9 1052.3 241 2.17 1 FALSE 0.0007341 0.01052 0.396 -250 73874 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIPAPEEER [R].gIPAPEEER.[T] N-Term(TMT6plex) 2 Q8BK64 Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Mus musculus OX=10090 GN=Ahsa1 PE=1 SV=2 Q8BK64; Q3TL79 Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Mus musculus OX=10090 GN=Ahsa1 PE=1 SV=2; Aha1_N domain-containing protein OS=Mus musculus OX=10090 GN=Ahsa1 PE=2 SV=1 0 2 2 0.645 0 1 1 1 613.8335 1226.65972 1226.65783 1.54 0.00094 0/0 0 0 23666746 HCD 30 MS2 25.60687 964.3 67.223 57.8846 16485 16485 16478 QEplus033719.raw F4 967.5 717.2 1055.8 918.9 967.2 1159.1 189 3.07 1 FALSE 5.44E-05 0.00227 0.586 -250 73880 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAYERGEEPGK [R].vAYERGEEPGk.[S] N-Term(TMT6plex); K11(TMT6plex) 6 E9QNN1 DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1 O70133-2; Q3UR42; O70133-3; E9QNN1; A0A087WPL5; O70133 Isoform 2 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; DEAH box protein 9 (Fragment) OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; Isoform 3 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=2 1 3 3 0.5391 0 1 1 1 564.98303 1692.93454 1692.93211 1.44 0.00081 0/0 0 0 22204718 HCD 30 MS2 22.59183 1166.8 82.903 57.8868 16486 16486 16478 QEplus033719.raw F4 1193.5 1169.6 1326.5 867.7 1410.2 1033.3 450 2.43 1 FALSE 1.14E-05 0.000131 0.835 -250 73892 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YASGASCLATR [R].yASGAScLATR.[L] N-Term(TMT6plex); C7(Carbamidomethyl) 2 A2AUC9 Kelch-like protein 41 OS=Mus musculus OX=10090 GN=Klhl41 PE=1 SV=1 A2AUC9; Q3V184 Kelch-like protein 41 OS=Mus musculus OX=10090 GN=Klhl41 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Klhl41 PE=2 SV=1 0 2 2 0.7795 0 1 1 1 693.35638 1385.70549 1385.70447 0.74 0.00051 0/0 0 0 17957220 HCD 30 MS2 4.660823 727.4 110 57.8989 16490 16490 16489 QEplus033719.raw F4 833.9 199.5 762.2 1206.6 227.8 1134.7 167 3.81 1 FALSE 1.14E-05 2.45E-08 1.543 -250 73900 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIMDEDDACGR [K].gIMDEDDAcGR.[Q] N-Term(TMT6plex); C9(Carbamidomethyl) 1 Q02257 Junction plakoglobin OS=Mus musculus OX=10090 GN=Jup PE=1 SV=3 Q02257 Junction plakoglobin OS=Mus musculus OX=10090 GN=Jup PE=1 SV=3 0 2 2 0.9093 0 1 1 1 734.32373 1467.64018 1467.64054 -0.25 -0.00018 0/0 0 0 5454160 HCD 30 MS2 14.62801 416.5 110 57.9014 16491 16491 16489 QEplus033719.raw F4 406.3 399.7 475.4 345.7 425.8 446.1 7 4.41 1 FALSE 1.14E-05 4.45E-08 1.494 -250 73903 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILTTEGR [K].iLTTEGR.[N] N-Term(TMT6plex) 6 E9QNN1 DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1 O70133-2; O70133-3; Q3TF92; E9QNN1; A0A087WPL5; O70133 Isoform 2 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; Isoform 3 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; OB_NTP_bind domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dhx9 PE=2 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=2 0 2 2 0.3287 0 1 1 1 509.80887 1018.61046 1018.60943 1.02 0.00052 0/0 0 0 52318948 HCD 30 MS2 31.0912 757.3 19.029 57.9037 16492 16492 16489 QEplus033719.raw F4 811.5 657.9 836.5 650.3 810.3 777.6 101 2.89 1 FALSE 0.0003113 0.006095 0.477 -250 73913 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGALCEENMR [K].eGALcEENMR.[G] N-Term(TMT6plex); C5(Carbamidomethyl) 17 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q3TSK4; Q8C153; P58252; Q61509; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3TPG2; Q3UZ14; Q99LT6; Q3TLB1; Q3TWX1; Q3TX47 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Elongation factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 0 3 3 0.4589 0 1 1 1 479.89398 1437.66739 1437.66637 0.71 0.00034 0/0 0 0 42446412 HCD 30 MS2 41.33677 482.3 23.299 57.9059 16493 16493 16489 QEplus033719.raw F4 533.2 398.3 536.8 405 505.1 515.3 38 3.53 1 FALSE 3.35E-05 0.001358 0.635 -250 73919 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVHPDTGISSK [K].qVHPDTGISSk.[A] N-Term(TMT6plex); K11(TMT6plex) 18 Q64475; Q64525 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3;Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3 Q64475; Q8CGP2; Q64525; Q64524; Q8CGP1; P10854; A0JNS9; Q64478; P70696; Q9D2U9; Q8CGP2-2; Q8CBB6; Q6ZWY9; Q8CGP0; Q8VEE3; P10853; A0JLV3; Q921L4 Histone H2B type 1-B OS=Mus musculus OX=10090 GN=H2bc3 PE=1 SV=3; Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp PE=1 SV=3; Histone H2B type 2-B OS=Mus musculus OX=10090 GN=Hist2h2bb PE=1 SV=3; Histone H2B type 2-E OS=Mus musculus OX=10090 GN=H2bc21 PE=1 SV=3; Histone H2B type 1-K OS=Mus musculus OX=10090 GN=H2bc12 PE=1 SV=3; Histone H2B type 1-M OS=Mus musculus OX=10090 GN=H2bc14 PE=1 SV=2; Histone H2B OS=Mus musculus OX=10090 GN=H2bc1 PE=2 SV=1; Histone H2B type 1-H OS=Mus musculus OX=10090 GN=H2bc9 PE=1 SV=3; Histone H2B type 1-A OS=Mus musculus OX=10090 GN=H2bc1 PE=1 SV=3; Histone H2B type 3-A OS=Mus musculus OX=10090 GN=Hist3h2ba PE=1 SV=3; Isoform 2 of Histone H2B type 1-P OS=Mus musculus OX=10090 GN=Hist1h2bp; Histone H2B OS=Mus musculus OX=10090 GN=H2bc24 PE=2 SV=1; Histone H2B type 1-C/E/G OS=Mus musculus OX=10090 GN=H2bc4 PE=1 SV=3; Histone H2B type 3-B OS=Mus musculus OX=10090 GN=H2bu1 PE=1 SV=3; Hist2h2bb protein OS=Mus musculus OX=10090 GN=Hist2h2bb PE=2 SV=1; Histone H2B type 1-F/J/L OS=Mus musculus OX=10090 GN=H2bc7 PE=1 SV=2; Histone H2B (Fragment) OS=Mus musculus OX=10090 GN=Hist1h2bj PE=2 SV=1; Histone H2B OS=Mus musculus OX=10090 GN=LOC665622 PE=2 SV=1 0 3 3 0.7558 0 1 1 1 542.97931 1626.92337 1626.92154 1.13 0.00061 0/0 0 0 39050908 HCD 30 MS2 13.19731 740.2 40.78 57.9082 16494 16494 16489 QEplus033719.raw F4 785.9 712.1 713.9 707.9 982.2 539.2 405 4.75 2 FALSE 1.14E-05 1.37E-07 1.402 -250 73931 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVSSYEK [K].nVSSYEk.[T] N-Term(TMT6plex); K7(TMT6plex) 2 Q9WVE8 Protein kinase C and casein kinase substrate in neurons protein 2 OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1 Q8BNK9; Q9WVE8 SH3 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Pacsin2 PE=2 SV=1; Protein kinase C and casein kinase substrate in neurons protein 2 OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1 0 2 2 0.4968 0 1 1 1 642.86414 1284.72099 1284.71999 0.78 0.0005 0/0 0 0 28693728 HCD 30 MS2 21.99275 1420.6 64.145 57.9127 16496 16496 16489 QEplus033719.raw F4 1419.4 1267.9 1610.9 1228.1 1532.7 1464.3 291 3.16 1 FALSE 0.0003599 0.006953 0.459 -250 73936 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALVDGPCTR [R].aLVDGPcTR.[V] N-Term(TMT6plex); C7(Carbamidomethyl) 3 Q9CR57; Q569Z0 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14 PE=1 SV=3;60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14-ps1 PE=2 SV=1 Q9CR57; Q569Z0; Q9CWK0 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14 PE=1 SV=3; 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14-ps1 PE=2 SV=1; 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14 PE=2 SV=1 0 3 3 0.57 0 1 1 1 406.55548 1217.65189 1217.65097 0.75 0.00031 0/0 0 0 11564821 HCD 30 MS2 52.20761 938.2 75.813 57.915 16497 16497 16489 QEplus033719.raw F4 977.8 799.9 1077.9 653.1 922.5 1197.8 242 3 2 FALSE 0.0002119 0.00425 0.52 -250 73976 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNTHTEILK [K].gNTHTEILk.[G] N-Term(TMT6plex); K9(TMT6plex) 1 P34955 SWISS-PROT:P34955 (Bos taurus) Alpha-1-antiproteinase precursor P34955 SWISS-PROT:P34955 (Bos taurus) Alpha-1-antiproteinase precursor 0 3 3 0.6605 0 1 1 1 490.96124 1470.86917 1470.86805 0.77 0.00038 0/0 0 0 24073166 HCD 30 MS2 23.65113 1257.2 68.45 57.9363 16505 16505 16500 QEplus033719.raw F4 1760.5 630.1 916.1 678.8 2696.2 861.3 370 3.77 1 TRUE 1.14E-05 8.51E-05 0.87 -250 73982 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYDDPEVQK [R].rYDDPEVQk.[D] N-Term(TMT6plex); K9(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 1 3 3 0.5973 0 1 1 1 536.6322 1607.88205 1607.87934 1.69 0.0009 0/0 0 0 19934802 HCD 30 MS2 8.072016 1132.6 110 57.9388 16506 16506 16500 QEplus033719.raw F4 1302.9 928.5 1214.5 1126.8 1041.8 1181 407 3.65 1 FALSE 1.14E-05 2.50E-08 1.541 -250 74010 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAEQFK [R].nAEQFk.[D] N-Term(TMT6plex); K6(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q7TQJ6; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 0 2 2 0.2639 0 1 1 1 597.84851 1194.68974 1194.68829 1.21 0.00073 0/0 0 0 21988440 HCD 30 MS2 40.07343 1749.6 66.828 57.9484 16510 16510 16500 QEplus033719.raw F4 2041.7 1492 1735.2 1559.3 2247.6 1421.7 332 2.16 1 FALSE 0.004228 0.07754 0.068 -250 74053 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EITEEK [K].eITEEk.[FE] N-Term(TMT6plex); K6(TMT6plex) 1 B1AWM0 Cyclic nucleotide-binding domain-containing 1 (Fragment) OS=Mus musculus OX=10090 GN=Cnbd1 PE=4 SV=1 0 2 2 0.2112 0 1 1 3 603.85297 1206.69866 1206.69819 0.39 0.00023 0/0 0 0 25266200 HCD 30 MS2 23.1124 1613.2 71.068 57.9647 16516 16516 16511 QEplus033719.raw F4 1982.7 1072.5 1495 1837.8 1640.6 1650.5 436 2.32 1 FALSE 0.005197 0.08882 0.037 -250 74054 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELTEEK [K].eLTEEk.[FE] N-Term(TMT6plex); K6(TMT6plex) 2 P14152 "Malate dehydrogenase, cytoplasmic OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=3" P14152; A0A5F8MPN8 "Malate dehydrogenase, cytoplasmic OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=3; Malate dehydrogenase OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=1" 0 2 2 0.2112 0 1 2 2 603.85297 1206.69866 1206.69819 0.39 0.00023 0/0 0 0 25266200 HCD 30 MS2 23.1124 1613.2 71.068 57.9647 16516 16516 16511 QEplus033719.raw F4 1982.7 1072.5 1495 1837.8 1640.6 1650.5 436 2.32 1 FALSE 0.005197 0.08882 0.037 -250 74059 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEAAEYAK [K].eEAAEYAk.[L] N-Term(TMT6plex); K8(TMT6plex) 3 Q5BLK1 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1 Q3TL53; Q5BLK1; Q8BT09 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.5138 0 1 1 1 684.87469 1368.74211 1368.74112 0.73 0.0005 0/0 0 0 23523872 HCD 30 MS2 6.83118 1120.2 110 57.9672 16517 16517 16511 QEplus033719.raw F4 1175 802 1206.3 889.5 1375.8 1272.5 282 3.62 1 FALSE 1.14E-05 0.0001519 0.822 -250 74063 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IECDDKGDGSCDVR [K].iEcDDkGDGScDVR.[Y] N-Term(TMT6plex); C3(Carbamidomethyl); K6(TMT6plex); C11(Carbamidomethyl) 7 B9EKP5; Q8VHX6 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1;Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3" Q3U7N9; B7FAV1; B9EKP5; Q8BTM8; Q8VHX6-2; Q8VHX6; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 1 3 3 0.7038 0 1 1 1 695.33441 2083.98868 2083.97887 4.71 0.00327 0/0 0 0 10900483 HCD 30 MS2 34.39434 1045.1 110 57.9697 16518 16518 16511 QEplus033719.raw F4 1044.2 997.7 1088.6 765.5 1267.9 1106.9 111 3.41 2 FALSE 1.14E-05 2.57E-06 1.159 -250 74068 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQTYQNYK [R].sQTYQNYk.[N] N-Term(TMT6plex); K8(TMT6plex) 3 Q62261-2 "Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q3TTX2; Q9Z2V0; Q62261-2 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Beta spectrin homolog OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 2 2 0.3648 0 1 1 1 745.40717 1489.80705 1489.80511 1.3 0.00097 0/0 0 0 6741009 HCD 30 MS2 0 428.6 110 57.9722 16519 16519 16511 QEplus033719.raw F4 428.3 362.5 528.1 361.1 462.9 428.5 335 3.92 1 FALSE 1.14E-05 8.34E-05 0.872 -250 74090 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALEDETK [K].aLEDETk.[N] N-Term(TMT6plex); K7(TMT6plex) 6 Q5SV64 Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1 Q80T68; Q5SV64; Q3UH59; Q6PB65; Q4KMN4; Q61879 MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 0 2 2 0.5426 0 1 1 1 632.36426 1263.72124 1263.71965 1.25 0.00079 0/0 0 0 51637116 HCD 30 MS2 6.023136 941.4 33.708 57.9846 16523 16523 16522 QEplus033719.raw F4 933.7 778.4 921.6 655.3 1504.1 855.6 358 2.23 1 FALSE 0.001125 0.01487 0.334 -250 74097 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CVAALAR [R].cVAALAR.[V] N-Term(TMT6plex); C1(Carbamidomethyl) 5 E9PYH2 Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 PE=1 SV=1 Q91V12-3; E9PYH2; Q91V12-4; Q91V12; Q91V12-2 Isoform C of Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7; Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 PE=1 SV=1; Isoform D of Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7; Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 PE=1 SV=2; Isoform A of Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 0 2 2 0.3242 0 1 1 1 495.29276 989.57823 989.57635 1.9 0.00094 0/0 0 0 22003250 HCD 30 MS2 57.99752 686.6 29.196 57.9868 16524 16524 16522 QEplus033719.raw F4 710.1 539 682.9 707.3 715.9 764.2 280 2.19 1 FALSE 0.0006035 0.008973 0.422 -250 74114 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESGFAGK [R].eSGFAGk.[I] N-Term(TMT6plex); K7(TMT6plex) 1 B2RRH9 Glutamine amidotransferase OS=Mus musculus OX=10090 GN=Gmps PE=1 SV=1 B2RRH9 Glutamine amidotransferase OS=Mus musculus OX=10090 GN=Gmps PE=1 SV=1 0 2 2 0.2042 0 1 1 1 577.33496 1153.66265 1153.66174 0.78 0.00045 0/0 0 0 19118228 HCD 30 MS2 67.66655 1333.6 50.523 57.9914 16526 16526 16522 QEplus033719.raw F4 1651.9 901.3 1223.1 1264.3 1619.9 1340.9 269 1.91 1 FALSE 0.0007626 0.01069 0.393 -250 74127 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLMPDGTSR [K].gLMPDGTSR.[F] N-Term(TMT6plex) 1 P28474 Alcohol dehydrogenase class-3 OS=Mus musculus OX=10090 GN=Adh5 PE=1 SV=3 P28474 Alcohol dehydrogenase class-3 OS=Mus musculus OX=10090 GN=Adh5 PE=1 SV=3 0 2 2 0.4638 0 1 1 1 581.80798 1162.60869 1162.60877 -0.07 -0.00004 0/0 0 0 13038461 HCD 30 MS2 47.18204 1684.8 110 57.9962 16528 16528 16522 QEplus033719.raw F4 1839.6 1455.4 1756.9 1422 2111.1 1523.9 208 2.76 1 FALSE 0.001421 0.02029 0.279 -250 74136 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAVSAK [K].vAVSAk.[L] N-Term(TMT6plex); K6(TMT6plex) 2 Q9CPY7 Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 PE=1 SV=3 Q9CPY7; Q9CPY7-2 Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 PE=1 SV=3; Isoform 2 of Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 0 2 2 0.0056 2 2 3 516.84625 1032.68523 1032.68175 3.37 0.00174 0/0 0 0 12525561 HCD 30 MS2 52.93802 1657.5 94.484 57.9984 16529 16529 16522 QEplus033719.raw F4 2201.7 1008.4 1770.1 1688 1385.5 1891.5 54 1.79 1 FALSE 0.005324 0.09087 0.032 -250 74148 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVQEIQSHMGR [K].qVQEIQSHMGR.[L] N-Term(TMT6plex) 2 A2A9I0 Golgi SNAP receptor complex member 2 OS=Mus musculus OX=10090 GN=Gosr2 PE=1 SV=1 A2A9I0; O35166 Golgi SNAP receptor complex member 2 OS=Mus musculus OX=10090 GN=Gosr2 PE=1 SV=1; Golgi SNAP receptor complex member 2 OS=Mus musculus OX=10090 GN=Gosr2 PE=1 SV=2 0 3 3 0.7189 0 1 1 1 514.60632 1541.80442 1541.80558 -0.75 -0.00039 0/0 0 0 10112735 HCD 30 MS2 49.41655 999.7 110 58.0032 16531 16531 16522 QEplus033719.raw F4 1156.1 708 1038.1 959.3 1053.5 1083 218 5.55 1 FALSE 1.14E-05 1.81E-08 1.568 -250 74156 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQGNAYYAK [K].eQGNAYYAk.[K] N-Term(TMT6plex); K9(TMT6plex) 11 Q3UL32 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnajc7 PE=2 SV=1 Q3UL32; A0A6I8MWW2; A0A6I8MWZ9; A0A6I8MX00; A0A6I8MWZ5; A0A6I8MX31; A2A5E1; A0A6I8MWX8; Q9QYI3; A0A6I8MWY7; F7BTP8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnajc7 PE=2 SV=1; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 (Fragment) OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=2; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=2; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 (Fragment) OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=2 0 2 2 0.6708 0 1 1 1 751.4068 1501.80632 1501.80511 0.8 0.0006 0/0 0 0 8848243 HCD 30 MS2 30.14213 547.4 110 58.0057 16532 16532 16522 QEplus033719.raw F4 555.7 446.8 666.9 456.3 559.7 599.1 308 4.01 1 FALSE 1.14E-05 1.48E-06 1.205 -250 74160 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNTVTPGGKPNK [K].nNTVTPGGkPNk.[T] N-Term(TMT6plex); K9(TMT6plex); K12(TMT6plex) 3 O55142 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2 O55142; Q9DC85; Q8BQV7 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1 0 3 3 0.6131 0 1 1 1 638.7182 1914.14005 1914.13757 1.29 0.00083 0/0 0 0 8689348 HCD 30 MS2 33.84339 965.7 110 58.013 16534 16534 16533 QEplus033719.raw F4 978.6 777.3 987.5 815.2 1199.9 1035.8 341 3.36 1 FALSE 1.14E-05 1.54E-08 1.582 -250 74176 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGGRLEDTK [K].vGGRLEDTk.[L] N-Term(TMT6plex); K9(TMT6plex) 2 P80316 T-complex protein 1 subunit epsilon OS=Mus musculus OX=10090 GN=Cct5 PE=1 SV=1 E0CZA1; P80316 T-complex protein 1 subunit epsilon (Fragment) OS=Mus musculus OX=10090 GN=Cct5 PE=1 SV=1; T-complex protein 1 subunit epsilon OS=Mus musculus OX=10090 GN=Cct5 PE=1 SV=1 1 3 3 0.5662 0 1 1 1 478.28979 1432.85483 1432.8524 1.7 0.00081 0/0 0 0 70956256 HCD 30 MS2 27.85378 1080.1 22.103 58.0178 16536 16536 16533 QEplus033719.raw F4 1433.9 915.2 1189.1 721.9 1152.2 1068.2 435 3.02 1 FALSE 0.0008445 0.01161 0.379 -250 74200 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQVLIRPCSK [K].rQVLIRPcSk.[V] N-Term(TMT6plex); C8(Carbamidomethyl); K10(TMT6plex) 4 Q5M9M4 40S ribosomal protein S15a OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=1 D3Z712; D3YVB4; F8WJ41; Q5M9M4 40S ribosomal protein S15a (Fragment) OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=2; 40S ribosomal protein S15a (Fragment) OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=1; 40S ribosomal protein S15a (Fragment) OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=1; 40S ribosomal protein S15a OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=1 1 4 4 0.5376 0 1 1 1 429.51828 1715.05129 1715.05145 -0.09 -0.00004 0/0 0 0 37933972 HCD 30 MS2 27.86529 885.3 41.529 58.0245 16539 16539 16533 QEplus033719.raw F4 862 744.8 1016.6 697.3 946 1045.3 268 3.72 1 FALSE 1.14E-05 0.0001401 0.829 -250 74216 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVTRHPDLK [K].vVTRHPDLk.[T] N-Term(TMT6plex); K9(TMT6plex) 3 A0A0R4IZW8 Calcium-activated neutral proteinase small subunit OS=Mus musculus OX=10090 GN=Capns1 PE=1 SV=1 O88456; A0A0R4IZW8; A0A0R4J1C2 Calpain small subunit 1 OS=Mus musculus OX=10090 GN=Capns1 PE=1 SV=1; Calcium-activated neutral proteinase small subunit OS=Mus musculus OX=10090 GN=Capns1 PE=1 SV=1; Calcium-activated neutral proteinase small subunit OS=Mus musculus OX=10090 GN=Capns1 PE=1 SV=1 1 4 4 0.5718 0 1 1 1 381.4924 1522.94777 1522.94697 0.53 0.0002 0/0 0 0 22460904 HCD 30 MS2 11.4134 446.3 37.689 58.029 16541 16541 16533 QEplus033719.raw F4 478.3 405.1 505.6 306.3 586.5 396 284 3.69 1 FALSE 5.44E-05 0.002482 0.577 -250 74234 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EADPMSK [R].eADPMSk.[V] N-Term(TMT6plex); K7(TMT6plex) 1 Q9CQW1 Synaptobrevin homolog YKT6 OS=Mus musculus OX=10090 GN=Ykt6 PE=1 SV=1 Q9CQW1 Synaptobrevin homolog YKT6 OS=Mus musculus OX=10090 GN=Ykt6 PE=1 SV=1 0 2 2 0.5398 0 1 1 1 618.33929 1235.67131 1235.67059 0.58 0.00036 0/0 0 0 16643943 HCD 30 MS2 26.71004 1315.5 110 58.0338 16543 16543 16533 QEplus033719.raw F4 1360.3 1004.7 1291.7 1158.6 1717.5 1360.4 285 2.26 1 FALSE 0.0006216 0.009261 0.417 -250 74250 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYDDPEVQK [R].rYDDPEVQk.[D] N-Term(TMT6plex); K9(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 1 4 4 0.4697 0 1 1 1 402.72525 1607.87917 1607.87934 -0.11 -0.00004 0/0 0 0 16474590 HCD 30 MS2 40.08108 558.2 46.095 58.0434 16546 16546 16544 QEplus033719.raw F4 585.1 438.2 641.2 506.5 536 642.2 427 3.3 1 FALSE 0.00171 0.02858 0.224 -250 74257 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERVMYEK [K].eRVMYEk.[E] N-Term(TMT6plex); K7(TMT6plex) 1 Q5I0U7 Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=1 Q5I0U7 Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=1 1 3 3 0.2939 0 1 1 1 471.60403 1412.79755 1412.79719 0.25 0.00012 0/0 0 0 37564084 HCD 30 MS2 12.90497 1101.6 49.499 58.0456 16547 16547 16544 QEplus033719.raw F4 1092.2 1084.2 1249 684.8 1514.4 985 327 2.62 1 FALSE 0.001506 0.02268 0.26 -250 74290 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QNCDQFEK [K].qNcDQFEk.[L] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 1 P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor 0 2 2 0.6541 0 1 1 1 763.88776 1526.76824 1526.76735 0.58 0.00044 0/0 0 0 11378983 HCD 30 MS2 12.28786 762.3 110 58.0552 16551 16551 16544 QEplus033719.raw F4 878.3 123.3 238.5 72.4 3162.8 98.6 150 3.44 1 TRUE 1.14E-05 0.0002088 0.796 -250 74297 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAEQFK [R].nAEQFk.[D] N-Term(TMT6plex); K6(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q7TQJ6; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 0 3 3 0.3761 0 1 1 1 398.90128 1194.68927 1194.68829 0.82 0.00033 0/0 0 0 8919903 HCD 30 MS2 6.446518 826.2 91.657 58.0574 16552 16552 16544 QEplus033719.raw F4 881.6 730.4 850.8 626.1 1080.8 787.5 332 2.34 1 FALSE 0.008081 0.1355 -0.068 -250 74312 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYDDPEVQK [R].rYDDPEVQk.[D] N-Term(TMT6plex); K9(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 1 2 2 0.6319 0 1 1 1 804.44507 1607.88286 1607.87934 2.19 0.00176 0/0 0 0 7230115.5 HCD 30 MS2 0 390.9 110 58.0622 16554 16554 16544 QEplus033719.raw F4 404.9 333.2 473.4 395.4 328.2 410.4 405 3.64 1 FALSE 1.14E-05 0.0001756 0.81 -250 74358 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQLPQQK [K].tQLPQQk.[M] N-Term(TMT6plex); K7(TMT6plex) 1 Q1XH17 Tripartite motif-containing protein 72 OS=Mus musculus OX=10090 GN=Trim72 PE=1 SV=1 Q1XH17 Tripartite motif-containing protein 72 OS=Mus musculus OX=10090 GN=Trim72 PE=1 SV=1 0 2 2 0.6162 0 1 1 1 650.90314 1300.799 1300.79891 0.07 0.00005 0/0 0 0 36844788 HCD 30 MS2 4.516746 1062.7 54.142 58.0861 16563 16563 16555 QEplus033719.raw F4 1485.6 243.1 791.8 1892.1 340.1 1623.7 314 2.71 1 FALSE 0.001125 0.01481 0.335 -250 74366 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IKEDEDDK [R].ikEDEDDk.[T] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 6 Q3UBU0 HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1 Q3TUD6; Q3UBU0; Q91V38; Q9CW12; Q8CCY5; P08113 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Heat shock protein 90, beta (Grp94), member 1 OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Endoplasmin OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=2" 1 3 3 0.4825 0 1 1 1 560.31952 1678.944 1678.94664 -1.57 -0.00088 0/0 0 0 21220188 HCD 30 MS2 36.94639 1389.6 70.37 58.0883 16564 16564 16555 QEplus033719.raw F4 2101.3 935.4 1517 1231.7 1232 1320.2 477 2.57 1 FALSE 1.14E-05 0.0003644 0.749 -250 74373 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNLQNLER [K].gNLQNLER.[K] N-Term(TMT6plex) 2 Q3TG21 V-type proton ATPase subunit C OS=Mus musculus OX=10090 GN=Atp6v1c1 PE=2 SV=1 Q3TG21; Q9Z1G3 V-type proton ATPase subunit C OS=Mus musculus OX=10090 GN=Atp6v1c1 PE=2 SV=1; V-type proton ATPase subunit C 1 OS=Mus musculus OX=10090 GN=Atp6v1c1 PE=1 SV=4 0 2 2 0.3694 0 1 1 1 586.83301 1172.65874 1172.6585 0.2 0.00012 0/0 0 0 12927962 HCD 30 MS2 42.70586 1215 110 58.0979 16567 16567 16566 QEplus033719.raw F4 1388.2 915 1312.5 1099.4 1257.7 1317 315 2.22 1 FALSE 1.14E-05 0.0005956 0.707 -250 74381 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous INQLSAR [R].iNQLSAR.[W] N-Term(TMT6plex) 18 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 Q9QXZ0-3; B1ARU4; E9QA63; Q80TZ5; E9QNP1; Q4QQN2; F6RCJ3; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; F6YKN8; Q80ZZ3; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8 Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; MKIAA0465 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Macf1 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Macf1 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 2 2 0.2522 0 1 1 1 515.81439 1030.62151 1030.62066 0.82 0.00042 0/0 0 0 21221302 HCD 30 MS2 20.60501 1450.3 110 58.1004 16568 16568 16566 QEplus033719.raw F4 1707.1 885.6 1628.8 1355.4 1284 1841.2 228 2.3 3 FALSE 0.0006294 0.009452 0.413 -250 74391 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HNDLDDVGK [K].hNDLDDVGk.[D] N-Term(TMT6plex); K9(TMT6plex) 4 Q6XMP4 Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1 Q6XMP4; Q8BGQ7; Q3TZ32; Q3UD67 "Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1" 0 3 3 0.7708 0 1 1 1 490.93713 1470.79685 1470.79528 1.07 0.00052 0/0 0 0 55485164 HCD 30 MS2 43.26242 924.7 24.35 58.1027 16569 16569 16566 QEplus033719.raw F4 1028 544.7 772.8 531.7 1925.5 745.2 308 3.97 1 FALSE 1.14E-05 9.43E-06 1.052 -250 74397 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETPAASEAPSSAAK [K].eTPAASEAPSSAAk.[A] N-Term(TMT6plex); K14(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 0 3 3 0.7835 0 1 1 1 592.32697 1774.96634 1774.95871 4.3 0.00254 0/0 0 0 15381231 HCD 30 MS2 9.242516 565.8 110 58.1052 16570 16570 16566 QEplus033719.raw F4 577.4 494.2 647.4 463.5 639 573.2 387 4.85 1 FALSE 1.14E-05 6.63E-08 1.461 -250 74405 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FVVGSHVR [R].fVVGSHVR.[H] N-Term(TMT6plex) 3 Q3UK39 DNA replication licensing factor MCM2 OS=Mus musculus OX=10090 GN=Mcm2 PE=2 SV=1 Q3UK39; P97310; Q3UJN1 DNA replication licensing factor MCM2 OS=Mus musculus OX=10090 GN=Mcm2 PE=2 SV=1; DNA replication licensing factor MCM2 OS=Mus musculus OX=10090 GN=Mcm2 PE=1 SV=3; DNA replication licensing factor MCM2 OS=Mus musculus OX=10090 GN=Mcm2 PE=2 SV=1 0 3 3 0.6467 0 1 1 1 377.22769 1129.66852 1129.66794 0.51 0.00019 0/0 0 0 8473550 HCD 30 MS2 39.54523 391.5 110 58.1101 16572 16572 16566 QEplus033719.raw F4 389 307.7 384.8 357.2 464.6 445.6 362 3.51 1 FALSE 1.14E-05 2.47E-05 0.973 -250 74414 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IECDDKGDGSCDVR [K].iEcDDkGDGScDVR.[Y] N-Term(TMT6plex); C3(Carbamidomethyl); K6(TMT6plex); C11(Carbamidomethyl) 7 B9EKP5; Q8VHX6 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1;Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3" Q3U7N9; B7FAV1; B9EKP5; Q8BTM8; Q8VHX6-2; Q8VHX6; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 1 2 2 0.785 0 1 1 1 1042.49438 2083.98149 2083.97887 1.26 0.00131 0/0 0 0 7519494.5 HCD 30 MS2 0 193.9 110 58.1127 16573 16573 16566 QEplus033719.raw F4 199.3 182 219.5 139.8 222.8 199.7 102 3.86 2 FALSE 1.14E-05 1.02E-13 2.565 -250 74429 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WDVSGSR [K].wDVSGSR.[A] N-Term(TMT6plex) 3 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 Q8BTR1; B9EIU1; Q3TMX9 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=2; Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; GST_C domain-containing protein OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 0 2 2 0.5513 0 1 1 1 518.27325 1035.53923 1035.54207 -2.74 -0.00142 0/0 0 0 26522142 HCD 30 MS2 12.10934 1227.3 50.41 58.1174 16575 16575 16566 QEplus033719.raw F4 1250 967.6 1328.8 1139.9 1230.3 1447.3 179 2.34 1 FALSE 0.001335 0.01854 0.294 -250 74471 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYEEVARK [R].kYEEVARk.[L] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 38 E9Q456; G5E8R2; G5E8R1; P58774; Q8C7C3; A2AIM4; Q58E70; P58774-2; E9Q5J9; A0A0R4J1P2; E9Q450; Q6IRU2 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 E9Q456; Q9D1R6; E9Q455; G5E8R2; E9Q453; Q91VH3; G5E8R1; Q8BSH3; A0A571BEU1; D3Z6I8; E9Q452; P58774; F8WID5; A2RRI1; Q8C7C3; A2AIM4; Q3TJ53; Q58E70; D3Z2H9; Q3SX28; P58774-2; E9Q454; Q61344; E9Q5J9; A0A0R4J1P2; E9Q448; P21107; E9Q450; Q8K0Z5; G5E8R0; D3YVR0; Q564G1; B7ZNL3; Q8BP43; Q6IRU2; E9Q7Q3; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin 3, related sequence 7 OS=Mus musculus OX=10090 GN=Tpm3-rs7 PE=3 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=3; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 3, gamma OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 2 4 4 0.5447 0 1 1 1 428.26907 1710.05446 1710.05172 1.61 0.00069 0/0 0 0 74837816 HCD 30 MS2 17.40222 914.1 19.736 58.1342 16581 16581 16577 QEplus033719.raw F4 1166.7 597.1 911.3 844.5 1032.4 932.7 238 2.57 12 TRUE 0.002293 0.04501 0.157 -250 74491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGIIASAR [K].aGIIASAR.[A] N-Term(TMT6plex) 15 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q8C153; P58252; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3UZ14; Q3TK17; Q3TLB1; Q3TWX1; Q3TX47; O89069 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 0 2 2 0.3167 0 1 1 1 494.31119 987.6151 987.61485 0.26 0.00013 0/0 0 0 29926814 HCD 30 MS2 11.05805 1293.8 66.38 58.1388 16583 16583 16577 QEplus033719.raw F4 1335.5 1004 1514 1079.3 1236.8 1593.1 81 3 1 FALSE 1.14E-05 0.0003546 0.751 -250 74501 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITITNDQNR [K].iTITNDQNR.[L] N-Term(TMT6plex) 7 P20029 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q3U9G2; Q3U7T8; Q3TI47 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1 0 2 2 0.6875 0 1 1 1 652.36292 1303.71855 1303.71674 1.39 0.0009 0/0 0 0 29157932 HCD 30 MS2 27.945 806.5 58.114 58.141 16584 16584 16577 QEplus033719.raw F4 797.3 614.3 800.3 813.1 764.7 1049.3 347 3.36 1 FALSE 1.14E-05 2.44E-05 0.974 -250 74511 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WDVSGSR [K].wDVSGSR.[A] N-Term(TMT6plex) 3 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 Q8BTR1; B9EIU1; Q3TMX9 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=2; Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; GST_C domain-containing protein OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 0 2 2 0.5286 0 1 1 1 518.27643 1035.54558 1035.54207 3.39 0.00175 0/0 0 0 27699968 HCD 30 MS2 11.08476 1013.5 24.579 58.1433 16585 16585 16577 QEplus033719.raw F4 1038.3 794.1 1151.1 915.9 990.9 1190.8 139 2.1 1 FALSE 0.001213 0.01646 0.316 -250 74515 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LELQGSNSR [R].lELQGSNSR.[S] N-Term(TMT6plex) 6 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 2 2 0.5966 0 1 1 1 616.84509 1232.68291 1232.67963 2.66 0.00164 0/0 0 0 26982198 HCD 30 MS2 19.57887 1235 79.361 58.1456 16586 16586 16577 QEplus033719.raw F4 1308.2 1205.4 1323.8 922.3 1406.4 1243.8 307 2.9 1 FALSE 1.14E-05 2.66E-05 0.967 -250 74525 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSDLLK [K].rSDLLk.[L] N-Term(TMT6plex); K6(TMT6plex) 2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q80U36; Q9JHU4 MKIAA0325 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 1 3 3 0.0912 0 1 1 1 397.26062 1189.76731 1189.76688 0.36 0.00014 0/0 0 0 26074414 HCD 30 MS2 55.18575 1164.9 29.096 58.1478 16587 16587 16577 QEplus033719.raw F4 1293.1 803.4 1156.7 1093.5 1318.2 1324.7 279 2.74 1 FALSE 0.002132 0.03985 0.175 -250 74535 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVHELEK [K].nVHELEk.[IS] N-Term(TMT6plex); K7(TMT6plex) 14 Q69ZX3; Q5SV64 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1 Q2TAW4; Q69ZX3; Q80T68; A0A2R8VHF9; A0A338P6K2; B2RQQ1; O08638-2; O08638; Q5SV64; Q3UH59; E9QPE7; Q6PB65; Q4KMN4; Q61879 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2" 0 3 3 0.4558 0 1 1 1 442.93063 1326.77735 1326.77817 -0.62 -0.00027 0/0 0 0 15877662 HCD 30 MS2 22.14825 813.3 79.461 58.1551 16589 16589 16588 QEplus033719.raw F4 943.8 634.7 823.8 575.5 1145.4 756.5 284 3.51 2 FALSE 0.0007056 0.0103 0.399 -250 74549 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYHLQK [K].aYHLQk.[S] N-Term(TMT6plex); K6(TMT6plex) 1 Q9D823 60S ribosomal protein L37 OS=Mus musculus OX=10090 GN=Rpl37 PE=1 SV=3 Q9D823 60S ribosomal protein L37 OS=Mus musculus OX=10090 GN=Rpl37 PE=1 SV=3 0 3 3 0.2411 0 1 1 1 406.58444 1217.73877 1217.74066 -1.55 -0.00063 0/0 0 0 81888800 HCD 30 MS2 30.60725 589.4 8.716 58.1599 16591 16591 16588 QEplus033719.raw F4 542.2 490.7 676.1 411.5 611.8 804 381 2.82 1 FALSE 0.002688 0.05365 0.132 -250 74569 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VADSSKGPDEAK [K].vADSSkGPDEAk.[I] N-Term(TMT6plex); K6(TMT6plex); K12(TMT6plex) 9 A0A0R4J259 Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1 G3UZI2; G3UWM1; G3V018; G3UZ48; G3UXJ6; Q7TMK9; A0A0R4J259; G3UXU5; Q7TMK9-2 Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q (Fragment) OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip 1 3 3 0.4871 0 1 1 1 631.02991 1891.07517 1891.07397 0.63 0.0004 0/0 0 0 15460285 HCD 30 MS2 23.8236 1283.8 110 58.1717 16596 16596 16588 QEplus033719.raw F4 1358.8 1258.7 1262.7 1116.2 1574.4 1132.1 478 2.71 1 FALSE 1.14E-05 0.0001615 0.817 -250 74578 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETPAASEAPSSAAK [K].eTPAASEAPSSAAk.[A] N-Term(TMT6plex); K14(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 0 2 2 0.7647 0 1 1 1 887.9837 1774.96013 1774.95871 0.8 0.00071 0/0 0 0 9222369 HCD 30 MS2 0 565.1 110 58.1742 16597 16597 16588 QEplus033719.raw F4 512.4 586.6 694.8 414.2 610.7 572 379 4.76 1 FALSE 1.14E-05 2.19E-14 2.692 -250 74581 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIQVDNTDAEGR [K].tIQVDNTDAEGR.[L] N-Term(TMT6plex) 2 Q9CPY7 Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 PE=1 SV=3 Q9CPY7; Q9CPY7-2 Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 PE=1 SV=3; Isoform 2 of Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 0 2 2 0.3224 0 1 1 1 774.39764 1547.78801 1547.78628 1.12 0.00087 0/0 0 0 8787027 HCD 30 MS2 0 392.3 110 58.1767 16598 16598 16588 QEplus033719.raw F4 437.5 330 415.6 324.9 463.5 382 186 4.28 1 FALSE 1.14E-05 1.05E-10 1.993 -250 74587 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALDYCHSK [K].aLDYcHSk.[G] N-Term(TMT6plex); C5(Carbamidomethyl); K8(TMT6plex) 3 Q545V8 Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Csnk2a2 PE=1 SV=1 Q545V8; A0A1D5RM74; Q8BPF9 Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Csnk2a2 PE=1 SV=1; Casein kinase II subunit alpha' (Fragment) OS=Mus musculus OX=10090 GN=Csnk2a2 PE=1 SV=1; Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Csnk2a2 PE=2 SV=1 0 3 3 0.3639 0 1 1 1 484.59528 1451.77127 1451.77171 -0.3 -0.00014 0/0 0 0 9568752 HCD 30 MS2 60.41533 874 110 58.184 16600 16600 16599 QEplus033719.raw F4 1015.4 687.6 901.5 702.2 951.7 985.4 321 3.6 1 FALSE 1.14E-05 1.62E-05 1.008 -250 74612 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDEALEK [K].gDEALEk.[R] N-Term(TMT6plex); K7(TMT6plex) 4 Q3ULZ3 Phosphoserine aminotransferase OS=Mus musculus OX=10090 GN=Psat1 PE=2 SV=1 Q3U6K9; Q99JU9; Q3ULZ3; Q543K5 Phosphoserine aminotransferase OS=Mus musculus OX=10090 GN=Psat1 PE=1 SV=1; Phosphohydroxythreonine aminotransferase OS=Mus musculus OX=10090 GN=Psat1 PE=2 SV=1; Phosphoserine aminotransferase OS=Mus musculus OX=10090 GN=Psat1 PE=2 SV=1; Phosphoserine aminotransferase OS=Mus musculus OX=10090 GN=Psat1 PE=1 SV=1 0 2 2 0.4209 0 1 1 1 610.35114 1219.69499 1219.69344 1.28 0.00078 0/0 0 0 60292588 HCD 30 MS2 24.90264 1320.9 30.602 58.1911 16603 16603 16599 QEplus033719.raw F4 1500.6 953.7 1262.6 1169.6 1731.9 1306.8 451 2.78 1 FALSE 0.0008805 0.01225 0.37 -250 74617 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGTQTFCSR [R].vGTQTFcSR.[V] N-Term(TMT6plex); C7(Carbamidomethyl) 2 Q3U7R1 Extended synaptotagmin-1 OS=Mus musculus OX=10090 GN=Esyt1 PE=1 SV=2 Q3U7R1; Q3U7R1-2 Extended synaptotagmin-1 OS=Mus musculus OX=10090 GN=Esyt1 PE=1 SV=2; Isoform 2 of Extended synaptotagmin-1 OS=Mus musculus OX=10090 GN=Esyt1 0 2 2 0.6761 0 1 1 1 642.83289 1284.65849 1284.65679 1.33 0.00085 0/0 0 0 16818654 HCD 30 MS2 54.47116 997.4 110 58.1958 16605 16605 16599 QEplus033719.raw F4 1023.9 893.9 1103.6 815.1 1104.2 1043.5 124 2.13 1 FALSE 1.14E-05 0.0003138 0.762 -250 74632 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQSIGTENTEENRR [R].lQSIGTENTEENRR.[F] N-Term(TMT6plex) 11 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 A0A0U1RPT5; Q9CPQ9; D3YWI1; A0A0U1RPN8; A6ZI47; D3YV98; A6ZI46; D3Z510; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart2 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=2; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 1 3 3 0.7478 0 1 1 1 625.99701 1875.97647 1875.97218 2.29 0.00143 0/0 0 0 8712778 HCD 30 MS2 21.97087 735.5 110 58.2008 16607 16607 16599 QEplus033719.raw F4 743.4 540.8 765.7 748.4 715.4 899.2 323 4.48 1 FALSE 1.14E-05 2.49E-13 2.491 -250 74642 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYSEFCSR [K].tYSEFcSR.[H] N-Term(TMT6plex); C6(Carbamidomethyl) 12 H3BJU7 Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1 H3BJU7; Q60875-3; H3BKH9; Q60875; Q60875-5; H3BJX8; Q60875-2; Q3TYZ4; H3BJ40; H3BJ45; A0A2X0SFE2; Q60875-4 Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Isoform 3 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=4; Isoform 5 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=2; Isoform 2 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2; Guanine nucleotide exchange factor H1 (Fragment) OS=Mus musculus OX=10090 GN=Arhgef2 PE=2 SV=1; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Guanine nucleotide exchange factor H1 (Fragment) OS=Mus musculus OX=10090 GN=ARHGEF2 PE=4 SV=1; Isoform 4 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2 0 2 2 0.7313 0 1 1 1 639.80389 1278.60051 1278.5986 1.49 0.00095 0/0 0 0 7607765.5 HCD 30 MS2 31.60721 927 110 58.2033 16608 16608 16599 QEplus033719.raw F4 923.2 705.2 981.4 765.7 1209.1 977.4 33 2.68 1 FALSE 0.0002419 0.004927 0.503 -250 74655 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QMQETQWR [R].qMQETQWR.[C] N-Term(TMT6plex) 1 Q9ER38 Torsin-3A OS=Mus musculus OX=10090 GN=Tor3a PE=1 SV=2 Q9ER38 Torsin-3A OS=Mus musculus OX=10090 GN=Tor3a PE=1 SV=2 0 2 2 0.5595 0 1 1 1 668.33887 1335.67046 1335.66769 2.08 0.00139 0/0 0 0 4726836 HCD 30 MS2 0 547.9 110 58.2132 16611 16611 16610 QEplus033719.raw F4 543.5 404 585.1 546.9 569.1 639 160 2.52 1 FALSE 0.001778 0.03042 0.214 -250 74665 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VMTDESGK [K].vMTDESGk.[S] N-Term(TMT6plex); K8(TMT6plex) 4 P29341 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2 P29341; Q9D4E6; Q8BN32; Q99KL3 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc6 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1 0 2 2 0.6862 0 1 1 1 662.86304 1324.7188 1324.71827 0.4 0.00026 0/0 0 0 58889180 HCD 30 MS2 13.77374 1113.4 40.694 58.2155 16612 16612 16610 QEplus033719.raw F4 1244.6 944.7 1156.5 861.9 1482.9 989.7 314 3.25 1 FALSE 0.0005556 0.008256 0.434 -250 74680 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAPGYHMAK [K].aAPGYHMAk.[M] N-Term(TMT6plex); K9(TMT6plex) 12 Q3UYH9; Q9WUB3 "Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1;Glycogen phosphorylase, muscle form OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=3" Q3UYH9; Q9ET01; E9PUM3; Q3TJQ7; Q3V3U0; Q3UEJ6; Q9WUB3; Q3UZL2; Q3TFQ8; Q91WP9; Q3UGT5; Q8CI94 "Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Glycogen phosphorylase, liver form OS=Mus musculus OX=10090 GN=Pygl PE=1 SV=4; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygl PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygl PE=1 SV=1; Glycogen phosphorylase, muscle form OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=3; Alpha-1,4 glucan phosphorylase (Fragment) OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygl PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Glycogen phosphorylase, brain form OS=Mus musculus OX=10090 GN=Pygb PE=1 SV=3" 0 3 3 0.7159 0 1 1 1 468.60126 1403.78922 1403.78696 1.61 0.00075 0/0 0 0 34686036 HCD 30 MS2 14.03295 628 33.424 58.22 16614 16614 16610 QEplus033719.raw F4 624.6 349.5 571 846.1 425.9 951.2 403 4.4 2 FALSE 1.14E-05 2.25E-07 1.36 -250 74691 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QNCDQFEK [K].qNcDQFEk.[L] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 1 P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor 0 3 3 0.6494 0 1 1 1 509.5946 1526.76926 1526.76735 1.25 0.00064 0/0 0 0 19493934 HCD 30 MS2 59.02385 1004.4 46.189 58.2245 16616 16616 16610 QEplus033719.raw F4 1030.4 593.8 858.4 674 1984.6 885.3 154 2.71 1 TRUE 0.001778 0.03054 0.214 -250 74699 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LMMSQR [K].lMMSQR.[E] N-Term(TMT6plex) 1 P27612 Phospholipase A-2-activating protein OS=Mus musculus OX=10090 GN=Plaa PE=1 SV=4 P27612 Phospholipase A-2-activating protein OS=Mus musculus OX=10090 GN=Plaa PE=1 SV=4 0 2 2 0.5773 0 1 1 1 497.77341 994.53954 994.53752 2.03 0.00101 0/0 0 0 12428978 HCD 30 MS2 22.88641 1142.9 110 58.227 16617 16617 16610 QEplus033719.raw F4 1034.5 922.7 1250.6 948.8 1401.1 1299.8 93 2.2 1 FALSE 0.003041 0.0593 0.116 -250 74709 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQQGSAELLR [K].eQQGSAELLR.[S] N-Term(TMT6plex) 6 B9EJ54 Nucleoporin 205 OS=Mus musculus OX=10090 GN=Nup205 PE=1 SV=1 Q6P9Y6; B9EJ54; Q6PDG0; A0A0J9YUD5; Q6ZQG1; Q6P9L5 Nup205 protein (Fragment) OS=Mus musculus OX=10090 GN=Nup205 PE=2 SV=1; Nucleoporin 205 OS=Mus musculus OX=10090 GN=Nup205 PE=1 SV=1; Nup205 protein (Fragment) OS=Mus musculus OX=10090 GN=Nup205 PE=2 SV=1; Nucleoporin 205 OS=Mus musculus OX=10090 GN=Nup205 PE=1 SV=1; MKIAA0225 protein (Fragment) OS=Mus musculus OX=10090 GN=Nup205 PE=2 SV=1; Nup205 protein (Fragment) OS=Mus musculus OX=10090 GN=Nup205 PE=2 SV=1 0 2 2 0.5387 0 1 1 1 680.37512 1359.74297 1359.74296 0.01 0 0/0 0 0 3413278.5 HCD 30 MS2 0 405.9 110 58.232 16619 16619 16610 QEplus033719.raw F4 386.4 362.8 425.8 339.4 495.7 425.1 309 3.49 1 FALSE 1.14E-05 0.0004702 0.727 -250 74738 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHVIEALRR [K].eHVIEALRR.[A] N-Term(TMT6plex) 4 A2AM97 Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1 P86048; I7HLV2; Q3THJ6; A2AM97 60S ribosomal protein L10-like OS=Mus musculus OX=10090 GN=Rpl10l PE=2 SV=1; 60S ribosomal protein L10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=1 SV=1; Ribosomal_L16 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1 1 3 3 0.7694 0 1 1 1 451.27203 1351.80155 1351.80075 0.59 0.00027 0/0 0 0 59915132 HCD 30 MS2 25.60375 571.9 27.901 58.2466 16624 16624 16621 QEplus033719.raw F4 606.4 472.5 740 423.4 442.5 746.3 360 4.38 1 FALSE 1.14E-05 8.26E-10 1.823 -250 74747 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ACCGVPCK [K].accGVPck.[C] N-Term(TMT6plex); C2(Carbamidomethyl); C3(Carbamidomethyl); C7(Carbamidomethyl); K8(TMT6plex) 5 E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" A0A087WS16; Q05504; J3QQ16; O88493; E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen alpha 3 chain type VI (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Type VI collagen alpha 3 subunit OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" 0 2 2 0.7792 0 1 1 1 705.35876 1409.71025 1409.71037 -0.08 -0.00006 0/0 0 0 12318294 HCD 30 MS2 0 672 110 58.2516 16626 16626 16621 QEplus033719.raw F4 677.7 724.9 617.8 529.6 966.5 515.4 169 3.08 1 FALSE 1.14E-05 0.0002945 0.767 -250 74765 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GKLPEEARK [K].gkLPEEARk.[E] N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex) 3 P06745 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4 P06745; A0A0U1RP97; A0A0U1RQ18 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4; Glucose-6-phosphate isomerase 1 (Fragment) OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase (Fragment) OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1 2 3 3 0.4444 0 1 1 1 572.3642 1715.07804 1715.07827 -0.13 -0.00008 0/0 0 0 36883360 HCD 30 MS2 23.71619 849.6 46.931 58.2611 16630 16630 16621 QEplus033719.raw F4 808.2 638.6 912.2 881 826.4 1031.1 187 2.16 1 FALSE 0.0002419 0.004879 0.504 -250 74774 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSSGGSGAKPSDTASEATRPATLNR [K].gSSGGSGAkPSDTASEATRPATLNR.[F] N-Term(TMT6plex); K9(TMT6plex) 8 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 Q6NZJ6-2; E9Q9E1; Q6PD42; E9PVC5; E9PVC6; A0A0J9YUS5; Q6NZJ6; Q8K0J8 Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 0 4 4 0.6784 0 1 1 1 709.12592 2833.48183 2833.48043 0.49 0.00035 0/0 0 0 12222785 HCD 30 MS2 24.76217 480.1 110 58.2636 16631 16631 16621 QEplus033719.raw F4 501 381.9 550.6 391.7 529.1 526.1 430 2.83 1 FALSE 1.14E-05 4.39E-10 1.875 -250 74790 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGSSIGAIDSR [-R].eGSSIGAIDSR.[L] N-Term(TMT6plex) 2 Q9CZU6 "Citrate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Cs PE=1 SV=1" Q0QEL9; Q9CZU6 "Citrate synthase (Fragment) OS=Mus musculus OX=10090 GN=Cs PE=2 SV=1; Citrate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Cs PE=1 SV=1" 0 2 2 0.7514 0 1 1 1 660.85205 1320.69682 1320.69567 0.87 0.00058 0/0 0 0 177663168 HCD 30 MS2 37.61483 875.2 13.439 58.2757 16635 16635 16632 QEplus033719.raw F4 867.3 747.1 932.4 846.1 936.9 921.2 263 3.46 1 FALSE 1.14E-05 3.36E-08 1.517 -250 74795 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGHEATVGK [R].lGHEATVGk.[A] N-Term(TMT6plex); K9(TMT6plex) 5 Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1;ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TS02; Q3TED3; Q3UEA1; Q3V117; Q91V92 ATP citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate (pro-S-)-lyase (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 0 3 3 0.7026 0 1 1 1 457.27869 1369.82151 1369.82037 0.83 0.00038 0/0 0 0 81551312 HCD 30 MS2 22.0607 542.6 18.077 58.278 16636 16636 16632 QEplus033719.raw F4 485.3 527.3 628.5 370.5 592.2 652 269 4.17 2 FALSE 1.14E-05 7.88E-05 0.877 -250 74801 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKPVSSKPDSAYR [K].akPVSSkPDSAYR.[S] N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex) 2 Q9CZW4 Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=2 D3Z4I4; Q9CZW4 Long-chain-fatty-acid--CoA ligase 3 (Fragment) OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=1; Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=2 0 4 4 0.5807 0 1 1 1 524.06366 2093.23281 2093.2322 0.29 0.00015 0/0 0 0 37602036 HCD 30 MS2 9.839683 1330.7 58.151 58.2802 16637 16637 16632 QEplus033719.raw F4 1197.9 1098.7 1508.1 1294.2 1199.7 1685.7 384 3.22 1 FALSE 1.14E-05 0.0001325 0.834 -250 74821 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAPAPARPSGPSK [K].vAPAPARPSGPSk.[A] N-Term(TMT6plex); K13(TMT6plex) 4 Q5XJY5 Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=1 SV=2 Q8C0G7; Q5XJY5; Q8R1S6; Q3U4S9 Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1; Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=1 SV=2; Coatomer subunit delta (Fragment) OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1; Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1 0 3 3 0.5422 0 1 1 1 565.00964 1693.01438 1693.01611 -1.02 -0.00058 0/0 0 0 8621773 HCD 30 MS2 42.16983 1094.2 110 58.285 16639 16639 16632 QEplus033719.raw F4 1185.9 925.4 1210.9 885.1 1192.3 1165.6 403 2.49 1 FALSE 1.14E-05 0.0003769 0.746 -250 74830 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YWAAER [K].yWAAER.[VI] N-Term(TMT6plex) 4 Q3TMH2; Q9CZC8 Secernin-3 OS=Mus musculus OX=10090 GN=Scrn3 PE=1 SV=1;Secernin-1 OS=Mus musculus OX=10090 GN=Scrn1 PE=1 SV=1 A2AWQ9; Q3TMH2; Q6P6J8; Q9CZC8 Secernin-3 OS=Mus musculus OX=10090 GN=Scrn3 PE=1 SV=1; Secernin-3 OS=Mus musculus OX=10090 GN=Scrn3 PE=1 SV=1; Scrn3 protein (Fragment) OS=Mus musculus OX=10090 GN=Scrn3 PE=2 SV=1; Secernin-1 OS=Mus musculus OX=10090 GN=Scrn1 PE=1 SV=1 0 2 2 0.4545 0 1 1 1 512.77466 1024.54204 1024.54135 0.68 0.00035 0/0 0 0 6968466 HCD 30 MS2 21.75615 895.1 110 58.2875 16640 16640 16632 QEplus033719.raw F4 981.8 654.2 969.3 825.1 992.9 947.4 124 1.98 2 FALSE 0.003084 0.06001 0.114 -250 74838 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HNDLDDVGK [K].hNDLDDVGk.[D] N-Term(TMT6plex); K9(TMT6plex) 4 Q6XMP4 Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1 Q6XMP4; Q8BGQ7; Q3TZ32; Q3UD67 "Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1" 0 2 2 0.7065 0 1 1 1 735.90265 1470.79802 1470.79528 1.87 0.00137 0/0 0 0 6766486.5 HCD 30 MS2 0 369.7 110 58.29 16641 16641 16632 QEplus033719.raw F4 375.7 278.1 416.9 284.9 455.6 406.9 316 3.68 1 FALSE 1.14E-05 1.26E-06 1.218 -250 74845 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGHEATVGK [R].lGHEATVGk.[A] N-Term(TMT6plex); K9(TMT6plex) 5 Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1;ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TS02; Q3TED3; Q3UEA1; Q3V117; Q91V92 ATP citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate (pro-S-)-lyase (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 0 2 2 0.4372 0 1 1 1 685.41376 1369.82024 1369.82037 -0.1 -0.00007 0/0 0 0 5102572.5 HCD 30 MS2 28.41278 530.9 110 58.2925 16642 16642 16632 QEplus033719.raw F4 507.9 471.4 588.4 407.2 618.1 592.5 270 3.66 2 FALSE 1.14E-05 1.80E-06 1.189 -250 74853 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YAYYDTER [K].yAYYDTER.[I] N-Term(TMT6plex) 6 Q6IRT4 Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=2 SV=1 Q8VH52; Q6IRT4; Q9DCH4; Q8BTW2; Q3U8X1; Q3UVY8 Translation initiation factor-3 subunit 5 (Fragment) OS=Mus musculus OX=10090 GN=Eif3f PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=1 SV=2; Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=2 SV=1 0 2 2 0.6634 0 1 1 1 655.31708 1309.62688 1309.6262 0.52 0.00034 0/0 0 0 10977605 HCD 30 MS2 54.10261 862.6 110 58.3023 16645 16645 16643 QEplus033719.raw F4 869.4 757.6 939.3 791.9 949.8 867.4 58 3.03 1 FALSE 1.14E-05 0.0003107 0.762 -250 74865 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLTHPDDSVK [R].gLTHPDDSVk.[T] N-Term(TMT6plex); K10(TMT6plex) 1 Q8BJY1 26S proteasome non-ATPase regulatory subunit 5 OS=Mus musculus OX=10090 GN=Psmd5 PE=1 SV=4 Q8BJY1 26S proteasome non-ATPase regulatory subunit 5 OS=Mus musculus OX=10090 GN=Psmd5 PE=1 SV=4 0 3 3 0.6784 0 1 1 1 509.62442 1526.85871 1526.85788 0.54 0.00028 0/0 0 0 25096376 HCD 30 MS2 45.62315 879.7 28.047 58.3091 16648 16648 16643 QEplus033719.raw F4 911.6 593.6 827.5 621.7 1509.5 814.3 364 3.7 1 FALSE 1.14E-05 0.0004355 0.734 -250 74873 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YGEPTLR [R].yGEPTLR.[R] N-Term(TMT6plex) 8 Q3TWL6 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1 Q3TI61; Q3TWL6; Q3TW71; Q3U9Y8; Q3TIP0; Q8VDM4; Q3TXV1; Q80V77 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1 0 2 2 0.3867 0 1 1 1 532.80109 1064.5949 1064.59378 1.05 0.00056 0/0 0 0 20392530 HCD 30 MS2 37.67265 1398.9 84.228 58.3114 16649 16649 16643 QEplus033719.raw F4 1484.9 1188.3 1559.6 1276.8 1367.2 1516.3 267 2.25 1 FALSE 0.002267 0.0446 0.159 -250 74880 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALEEAK [K].aLEEAk.[E] N-Term(TMT6plex); K6(TMT6plex) 3 P39098 "Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB OS=Mus musculus OX=10090 GN=Man1a2 PE=1 SV=1" P39098-2; P39098; A2A723 "Isoform 2 of Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB OS=Mus musculus OX=10090 GN=Man1a2; Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB OS=Mus musculus OX=10090 GN=Man1a2 PE=1 SV=1; alpha-1,2-Mannosidase (Fragment) OS=Mus musculus OX=10090 GN=Man1a2 PE=1 SV=1" 0 2 2 0.09 0 1 1 1 559.84509 1118.68291 1118.68215 0.68 0.00038 0/0 0 0 17759460 HCD 30 MS2 42.59373 1147 100.241 58.3137 16650 16650 16643 QEplus033719.raw F4 1457.4 711.9 1179.6 1157.1 1169.7 1206.5 309 2 1 FALSE 0.003142 0.06122 0.111 -250 74923 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AWSVAR [K].aWSVAR.[L] N-Term(TMT6plex) 1 P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor 0 2 2 0.3436 0 1 1 1 459.77121 918.53514 918.53587 -0.79 -0.00036 0/0 0 0 54265972 HCD 30 MS2 35.52508 619.1 15.537 58.335 16658 16658 16654 QEplus033719.raw F4 560.4 430.5 745.4 468.6 960.4 549.5 116 1.95 1 TRUE 0.004206 0.07692 0.07 -250 74939 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANHPMDAEVTK [K].aNHPMDAEVTk.[A] N-Term(TMT6plex); K11(TMT6plex) 3 P17426 AP-2 complex subunit alpha-1 OS=Mus musculus OX=10090 GN=Ap2a1 PE=1 SV=1 P17426-2; A0A140LIG7; P17426 Isoform B of AP-2 complex subunit alpha-1 OS=Mus musculus OX=10090 GN=Ap2a1; AP-2 complex subunit alpha-1 (Fragment) OS=Mus musculus OX=10090 GN=Ap2a1 PE=1 SV=1; AP-2 complex subunit alpha-1 OS=Mus musculus OX=10090 GN=Ap2a1 PE=1 SV=1 0 3 3 0.7978 0 1 1 1 557.63635 1670.8945 1670.89361 0.53 0.0003 0/0 0 0 16625539 HCD 30 MS2 14.28967 1140.8 98.603 58.3419 16661 16661 16654 QEplus033719.raw F4 1204 903.9 1166.5 1113.9 1261 1195.7 314 4.55 1 FALSE 1.14E-05 4.86E-07 1.297 -250 74942 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIIDSTAGEQR [K].gIIDSTAGEQR.[Q] N-Term(TMT6plex) 7 Q6Q477 Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1 Q6Q477-2; Q6Q477; D1FNM9; D1FNM8; H2BL43; E9Q828; F7AAP4 Isoform 2 of Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4; Plasma membrane calcium-transporting ATPase 4 OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=2 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=2 SV=2; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=2 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b4 PE=1 SV=1 0 2 2 0.5571 0 1 1 1 688.37274 1375.73821 1375.73787 0.24 0.00017 0/0 0 0 16198057 HCD 30 MS2 23.82853 711.7 110 58.3444 16662 16662 16654 QEplus033719.raw F4 749.4 510.7 715.6 752.7 730.9 811 323 3.5 1 FALSE 1.14E-05 5.49E-07 1.287 -250 74951 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGSSIGAIDSR [-R].eGSSIGAIDSR.[L] N-Term(TMT6plex) 2 Q9CZU6 "Citrate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Cs PE=1 SV=1" Q0QEL9; Q9CZU6 "Citrate synthase (Fragment) OS=Mus musculus OX=10090 GN=Cs PE=2 SV=1; Citrate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Cs PE=1 SV=1" 0 3 3 0.6519 0 1 1 1 440.9039 1320.69715 1320.69567 1.12 0.00049 0/0 0 0 16029719 HCD 30 MS2 25.99755 657.6 68.272 58.3466 16663 16663 16654 QEplus033719.raw F4 1087 470.3 626.4 493.5 551.8 716.5 263 3.39 1 FALSE 1.14E-05 3.04E-05 0.956 -250 74958 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHVIEALRR [K].eHVIEALRR.[A] N-Term(TMT6plex) 4 A2AM97 Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1 P86048; I7HLV2; Q3THJ6; A2AM97 60S ribosomal protein L10-like OS=Mus musculus OX=10090 GN=Rpl10l PE=2 SV=1; 60S ribosomal protein L10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=1 SV=1; Ribosomal_L16 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1 1 2 2 0.6919 0 1 1 1 676.40466 1351.80205 1351.80075 0.96 0.00065 0/0 0 0 12677354 HCD 30 MS2 11.04695 471.3 110 58.3492 16664 16664 16654 QEplus033719.raw F4 474.5 392.5 550.1 374.3 479.5 557.2 351 3.57 1 FALSE 1.14E-05 9.02E-05 0.866 -250 74962 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYYDNPK [K].gYYDNPk.[V] N-Term(TMT6plex); K7(TMT6plex) 1 Q6ZQI3 Malectin OS=Mus musculus OX=10090 GN=Mlec PE=1 SV=2 Q6ZQI3 Malectin OS=Mus musculus OX=10090 GN=Mlec PE=1 SV=2 0 2 2 0.7072 0 1 1 1 657.85968 1314.71208 1314.70942 2.02 0.00133 0/0 0 0 12487163 HCD 30 MS2 38.72452 1225.8 110 58.3565 16666 16666 16665 QEplus033719.raw F4 1399.4 948.2 1287.1 1233.9 1304.5 1181.8 270 2.63 1 FALSE 0.003134 0.06114 0.111 -250 74970 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGALCEENMR [K].eGALcEENMR.[G] N-Term(TMT6plex); C5(Carbamidomethyl) 17 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q3TSK4; Q8C153; P58252; Q61509; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3TPG2; Q3UZ14; Q99LT6; Q3TLB1; Q3TWX1; Q3TX47 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Elongation factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 0 2 2 0.5373 0 1 1 1 719.3374 1437.66753 1437.66637 0.81 0.00058 0/0 0 0 9351053 HCD 30 MS2 16.72936 452.8 110 58.359 16667 16667 16665 QEplus033719.raw F4 446.9 354.5 492 397 473.6 552.7 39 4.02 1 FALSE 1.14E-05 6.10E-07 1.278 -250 74986 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLAEENQR [K].lLAEENQR.[L] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5604 0 1 1 1 601.34143 1201.67558 1201.67382 1.47 0.00088 0/0 0 0 88195744 HCD 30 MS2 20.18043 743.8 14.25 58.3635 16669 16669 16665 QEplus033719.raw F4 740.2 613.9 810.9 659.4 818.6 819.7 278 3.23 2 FALSE 5.44E-05 0.002131 0.592 -250 74992 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQAVQEATR [K].mQAVQEATR.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5809 0 1 1 1 631.84052 1262.67375 1262.67244 1.04 0.00066 0/0 0 0 75200336 HCD 30 MS2 29.65189 1106.4 28.793 58.3658 16670 16670 16665 QEplus033719.raw F4 1119 985.9 1179.4 972.1 1263.8 1118.4 253 3.46 2 FALSE 1.14E-05 2.92E-06 1.149 -250 75006 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQVWHAEHR [R].iQVWHAEHR.[G] N-Term(TMT6plex) 5 Q4KML7 Ezrin OS=Mus musculus OX=10090 GN=Ezr PE=1 SV=1 Q8CBU4; Q3UXR4; Q4KML7; Q3TCP5; Q3UL48 FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; Ezrin OS=Mus musculus OX=10090 GN=Ezr PE=1 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1 0 4 4 0.4536 0 1 1 1 351.94815 1404.77077 1404.76978 0.7 0.00025 0/0 0 0 16927012 HCD 30 MS2 45.96539 384.5 51.184 58.3703 16672 16672 16665 QEplus033719.raw F4 320.6 350.4 463.1 338.9 359.8 474.1 369 2.91 1 FALSE 0.00219 0.04238 0.166 -250 75015 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLPVSEQQER [K].dLPVSEQQER.[A] N-Term(TMT6plex) 3 Q9WVJ2 26S proteasome non-ATPase regulatory subunit 13 OS=Mus musculus OX=10090 GN=Psmd13 PE=1 SV=1 Q9WVJ2; E9Q5I9; F6ZQQ3 26S proteasome non-ATPase regulatory subunit 13 OS=Mus musculus OX=10090 GN=Psmd13 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 13 OS=Mus musculus OX=10090 GN=Psmd13 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 13 (Fragment) OS=Mus musculus OX=10090 GN=Psmd13 PE=1 SV=1 0 2 2 0.6636 0 1 1 1 715.37872 1429.75017 1429.74844 1.21 0.00087 0/0 0 0 13405306 HCD 30 MS2 0 494.9 110 58.3728 16673 16673 16665 QEplus033719.raw F4 540.5 420.6 547.8 446 490.4 524.1 234 3.3 1 FALSE 1.14E-05 8.74E-07 1.248 -250 75030 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEVTALER [K].qEVTALER.[S] N-Term(TMT6plex) 2 Q8VE88 Protein FAM114A2 OS=Mus musculus OX=10090 GN=Fam114a2 PE=1 SV=2 Q8VE88; Q8VE88-2 Protein FAM114A2 OS=Mus musculus OX=10090 GN=Fam114a2 PE=1 SV=2; Isoform 2 of Protein FAM114A2 OS=Mus musculus OX=10090 GN=Fam114a2 0 2 2 0.4286 0 1 1 1 587.83228 1174.65727 1174.66292 -4.8 -0.00282 0/0 0 0 12551697 HCD 30 MS2 23.02873 1446.1 110 58.3778 16675 16675 16665 QEplus033719.raw F4 1455.7 1412.3 1335.5 1055.4 2102.7 1314.8 345 1.61 1 FALSE 0.00243 0.04846 0.147 -250 75046 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQTSSLQPQSQEK [K].kQTSSLQPQSQEk.[A] N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex) 5 Q6PGL7 WASH complex subunit 2 OS=Mus musculus OX=10090 GN=Washc2 PE=1 SV=1 Q8BRP9; A0A0N4SV74; Q6PGL7; A0A0N4SUJ0; Q6PGL7-2 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Washc2 PE=2 SV=1; WASH complex subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Washc2 PE=1 SV=1; WASH complex subunit 2 OS=Mus musculus OX=10090 GN=Washc2 PE=1 SV=1; WASH complex subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Washc2 PE=1 SV=1; Isoform 2 of WASH complex subunit 2 OS=Mus musculus OX=10090 GN=Washc2 1 3 3 0.748 0 1 1 1 726.09045 2176.25681 2176.25406 1.26 0.00092 0/0 0 0 1824068.375 HCD 30 MS2 75.44249 264.9 110 58.3876 16678 16678 16676 QEplus033719.raw F4 285.3 191 286.7 250 280.5 295.6 415 3.81 1 FALSE 1.14E-05 1.46E-08 1.586 -250 75072 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPPINTK [K].nPPINTk.[S] N-Term(TMT6plex); K7(TMT6plex) 5 Q9CPW4 Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=1 SV=3 Q3TK56; Q3UA72; Q9CPW4; Q3UC32; Q3TKM9 Actin-related protein 2/3 complex subunit 5 (Fragment) OS=Mus musculus OX=10090 GN=Arpc5 PE=2 SV=1; Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=1 SV=1; Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=1 SV=3; Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=2 SV=1; Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=2 SV=1 0 2 2 0.3598 0 1 1 1 621.38513 1241.76299 1241.76179 0.96 0.0006 0/0 0 0 18813274 HCD 30 MS2 5.029728 1101.5 110 58.3975 16682 16682 16676 QEplus033719.raw F4 1100 1008.5 1094.3 764 1625.9 1016.2 254 2.14 1 FALSE 0.005756 0.09652 0.016 -250 75079 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NGEMIK [R].nGEMIk.[K] N-Term(TMT6plex); K6(TMT6plex) 13 A2AJ72; A0A0G2JFY5 Far upstream element (FUSE)-binding protein 3 OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1;Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1 A2AJ72; A0A0A6YVV5; A0A0G2JFY5; Q91WJ8-2; Q3TIX6; A0A0G2JGW9; Q0P6B2; A0A0G2JG00; Q3TUE1; Q91WJ8; Q3UUU2; Q3ULP9; Q3TIS5 Far upstream element (FUSE)-binding protein 3 OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1; Far upstream element (FUSE)-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Isoform 2 of Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1; Far upstream element (FUSE)-binding protein 3 OS=Mus musculus OX=10090 GN=Fubp3 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element (FUSE) binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=2 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fubp3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fubp1 PE=2 SV=1 0 2 2 0.3317 0 1 1 1 575.33917 1149.67107 1149.6702 0.75 0.00043 0/0 0 0 10447204 HCD 30 MS2 37.19723 1732 110 58.4025 16684 16684 16676 QEplus033719.raw F4 1914.4 1361.3 1707.9 1481 2224.6 1702.6 262 2.08 2 FALSE 0.005381 0.09176 0.029 -250 75096 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IITGGAAAQDGR [K].iITGGAAAQDGR.[L] N-Term(TMT6plex) 9 Q3UP61 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dlg1 PE=2 SV=1 Q571K0; S4R2T8; Q811D0-2; Q3UP61; H7BWY4; Q811D0; Q811D0-3; E9Q9H0; D3Z3B8 MKIAA4187 protein (Fragment) OS=Mus musculus OX=10090 GN=Dlg1 PE=2 SV=1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1; Isoform 2 of Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dlg1 PE=2 SV=1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1; Isoform 3 of Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1; Disks large homolog 1 OS=Mus musculus OX=10090 GN=Dlg1 PE=1 SV=1 0 2 2 0.7056 0 1 1 1 679.883 1358.75871 1358.75894 -0.17 -0.00011 0/0 0 0 7423436 HCD 30 MS2 8.740827 485.8 110 58.4075 16686 16686 16676 QEplus033719.raw F4 446.2 455.6 548 417.6 519.6 527.8 384 4.11 1 FALSE 1.14E-05 2.70E-08 1.535 -250 75119 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEDGPK [K].kLEDGPk.[F] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 5 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 P10126; Q3UZQ3; Q4FZE5; Q3UA81; Q3TII3 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Eef1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1 1 3 3 0.4621 0 1 1 1 491.98032 1473.9264 1473.92439 1.36 0.00067 0/0 0 0 138387600 HCD 30 MS2 10.66688 1408.7 13.239 58.4193 16690 16690 16687 QEplus033719.raw F4 2162 997.8 1402.9 1365.3 1340.7 1183.6 313 2.64 1 FALSE 1.14E-05 0.0002934 0.767 -250 75139 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TALAMGADR [R].tALAMGADR.[G] N-Term(TMT6plex) 5 Q9DCW4 Electron transfer flavoprotein subunit beta OS=Mus musculus OX=10090 GN=Etfb PE=1 SV=3 A0A0N4SVE0; A0A0N4SWE9; A0A0U1RNP5; A0A0U1RNR3; Q9DCW4 "Electron transfer flavoprotein subunit beta OS=Mus musculus OX=10090 GN=Etfbl PE=3 SV=1; Electron transferring flavoprotein, beta polypeptide-like OS=Mus musculus OX=10090 GN=Etfbl PE=4 SV=1; Electron transfer flavoprotein subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Etfb PE=3 SV=1; Electron transfer flavoprotein subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Etfb PE=4 SV=2; Electron transfer flavoprotein subunit beta OS=Mus musculus OX=10090 GN=Etfb PE=1 SV=3" 0 2 2 0.5176 0 1 1 1 567.81104 1134.61479 1134.61386 0.82 0.00047 0/0 0 0 94962440 HCD 30 MS2 7.272122 629.9 15.37 58.4238 16692 16692 16687 QEplus033719.raw F4 585 485.2 694.8 663.9 579.9 770.8 273 3.4 1 FALSE 1.14E-05 2.43E-06 1.164 -250 75179 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLQQSIAR [K].dLQQSIAR.[E] N-Term(TMT6plex) 4 Q80Y09 Pdcd6ip protein OS=Mus musculus OX=10090 GN=Pdcd6ip PE=2 SV=1 Q6ZPS9; Q9WU78-3; Q80Y09; Q9WU78 MKIAA1375 protein (Fragment) OS=Mus musculus OX=10090 GN=Pdcd6ip PE=2 SV=1; Isoform 3 of Programmed cell death 6-interacting protein OS=Mus musculus OX=10090 GN=Pdcd6ip; Pdcd6ip protein OS=Mus musculus OX=10090 GN=Pdcd6ip PE=2 SV=1; Programmed cell death 6-interacting protein OS=Mus musculus OX=10090 GN=Pdcd6ip PE=1 SV=3 0 2 2 0.5268 0 1 1 1 580.33545 1159.66362 1159.66325 0.32 0.00018 0/0 0 0 21045172 HCD 30 MS2 15.86674 981.4 73.506 58.4352 16697 16697 16687 QEplus033719.raw F4 1125.7 754.4 1054.9 800.3 1126.6 1026.3 304 2.98 1 FALSE 1.14E-05 9.97E-05 0.857 -250 75187 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HMALAK [R].hMALAk.[A] N-Term(TMT6plex); K6(TMT6plex) 3 Q9Z1E4 "Glycogen [starch] synthase, muscle OS=Mus musculus OX=10090 GN=Gys1 PE=1 SV=2" Q9Z1E4; A0A1B0GR90; A0A1B0GT92 "Glycogen [starch] synthase, muscle OS=Mus musculus OX=10090 GN=Gys1 PE=1 SV=2; Glycogen [starch] synthase (Fragment) OS=Mus musculus OX=10090 GN=Gys1 PE=1 SV=1; Glycogen [starch] synthase OS=Mus musculus OX=10090 GN=Gys1 PE=1 SV=1" 0 3 3 0.5597 0 1 1 1 376.90381 1128.69687 1128.69636 0.46 0.00017 0/0 0 0 16909712 HCD 30 MS2 42.85637 924.4 52.39 58.4424 16699 16699 16698 QEplus033719.raw F4 983 540.1 922.7 1056.4 828.1 1216.2 237 2.68 1 FALSE 0.0009259 0.01266 0.364 -250 75193 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQFSTDSR [R].vQFSTDSR.[V] N-Term(TMT6plex) 2 Q8CGY6 Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b PE=1 SV=1 Q8CGY6; Q8CGY6-2 Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b PE=1 SV=1; Isoform 2 of Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b 0 2 2 0.3483 0 1 1 1 584.81226 1168.61724 1168.61597 1.08 0.00063 0/0 0 0 30223250 HCD 30 MS2 31.51228 1324.5 68.805 58.4447 16700 16700 16698 QEplus033719.raw F4 1377.6 769.8 1492.9 1461.3 1016.9 1828.7 182 2.9 1 FALSE 0.0003496 0.006689 0.464 -250 75209 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQVWHEEHR [R].iQVWHEEHR.[G] N-Term(TMT6plex) 3 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4; Q3TZQ2 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 0 4 4 0.6535 0 1 1 1 366.44916 1462.7748 1462.77526 -0.32 -0.00012 0/0 0 0 33293294 HCD 30 MS2 41.08263 449.3 17.771 58.4515 16703 16703 16698 QEplus033719.raw F4 460.6 373.4 507.4 331.4 491.4 531.7 290 3.29 1 FALSE 0.0008805 0.01229 0.369 -250 75227 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQSLPK [K].aQSLPk.[T] N-Term(TMT6plex); K6(TMT6plex) 7 D3YVS1; D3Z3Q3 Smoothelin OS=Mus musculus OX=10090 GN=Smtn PE=1 SV=1;Smoothelin OS=Mus musculus OX=10090 GN=Smtn PE=1 SV=1 D3YVS1; D3Z3Q3; Q921U8; Q921U8-2; Q9D7A0; Q921U8-4; Q921U8-3 Smoothelin OS=Mus musculus OX=10090 GN=Smtn PE=1 SV=1; Smoothelin OS=Mus musculus OX=10090 GN=Smtn PE=1 SV=1; Smoothelin OS=Mus musculus OX=10090 GN=Smtn PE=1 SV=2; Isoform L2 of Smoothelin OS=Mus musculus OX=10090 GN=Smtn; Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 GN=Smtn PE=2 SV=1; Isoform S2 of Smoothelin OS=Mus musculus OX=10090 GN=Smtn; Isoform S1 of Smoothelin OS=Mus musculus OX=10090 GN=Smtn 0 2 2 0.0857 0 1 1 1 551.35638 1101.70549 1101.70322 2.07 0.00114 0/0 0 0 15584600 HCD 30 MS2 24.96512 1569.9 110 58.4562 16705 16705 16698 QEplus033719.raw F4 1668.9 861.4 1667.8 1659.8 1293.1 2268.4 138 1.75 2 FALSE 0.005381 0.09199 0.029 -250 75237 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNNVVFNR [K].dNNVVFNR.[F] N-Term(TMT6plex) 2 O35857 Mitochondrial import inner membrane translocase subunit TIM44 OS=Mus musculus OX=10090 GN=Timm44 PE=1 SV=2 O35857; Q8R3X4 Mitochondrial import inner membrane translocase subunit TIM44 OS=Mus musculus OX=10090 GN=Timm44 PE=1 SV=2; Timm44 protein (Fragment) OS=Mus musculus OX=10090 GN=Timm44 PE=2 SV=1 0 2 2 0.5556 0 1 1 1 603.82617 1206.64507 1206.64285 1.84 0.00111 0/0 0 0 15335741 HCD 30 MS2 66.18368 1173.6 47.196 58.4585 16706 16706 16698 QEplus033719.raw F4 1261.4 805.2 1154.7 1069.1 1502.9 1248.6 275 1.98 1 FALSE 5.44E-05 0.001903 0.603 -250 75245 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YQASTSNTVSK [K].yQASTSNTVSk.[L] N-Term(TMT6plex); K11(TMT6plex) 1 Q63918 Caveolae-associated protein 2 OS=Mus musculus OX=10090 GN=Cavin2 PE=1 SV=3 Q63918 Caveolae-associated protein 2 OS=Mus musculus OX=10090 GN=Cavin2 PE=1 SV=3 0 3 3 0.694 0 1 1 1 548.63904 1643.90256 1643.90047 1.27 0.0007 0/0 0 0 12812759 HCD 30 MS2 38.32192 1375.8 110 58.461 16707 16707 16698 QEplus033719.raw F4 1547.4 875 1475.5 1657 1202.9 1496.8 388 3.17 1 FALSE 1.14E-05 9.83E-05 0.858 -250 75250 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGPGATAGGAEK [R].mGPGATAGGAEk.[S] N-Term(TMT6plex); K12(TMT6plex) 6 Q0PD67 Rab1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1 Q5SW87; Q0PD67; Q3UB66; Q5SW86; Q5SW88; Q6ZPF0 "RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; Rab1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab1a PE=2 SV=1; RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; MKIAA3012 protein (Fragment) OS=Mus musculus OX=10090 GN=Rab1a PE=2 SV=1" 0 2 2 0.8073 0 1 1 1 752.91394 1504.8206 1504.81938 0.81 0.00061 0/0 0 0 10910576 HCD 30 MS2 0 681.2 110 58.4635 16708 16708 16698 QEplus033719.raw F4 705.6 608.3 752.3 546.1 765.2 709.6 352 4.36 1 FALSE 1.14E-05 6.05E-08 1.469 -250 75253 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSQFGQSCCLR [K].gSQFGQSccLR.[A] N-Term(TMT6plex); C8(Carbamidomethyl); C9(Carbamidomethyl) 2 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 B9EIU1; Q8CGC7 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4 0 2 2 0.7795 0 1 1 1 764.86285 1528.71843 1528.7198 -0.89 -0.00068 0/0 0 0 15194788 HCD 30 MS2 25.27888 609.7 110 58.4709 16710 16710 16709 QEplus033719.raw F4 578.2 411.1 588.8 463.9 1016 599.9 50 4.49 1 FALSE 1.14E-05 2.00E-08 1.56 -250 75261 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQDNMQAELNR [R].dQDNMQAELNR.[L] N-Term(TMT6plex) 2 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 Q61768; E9QAK5 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=1 0 2 2 0.6222 0 1 1 1 781.87567 1562.74407 1562.74304 0.66 0.00052 0/0 0 0 8513480 HCD 30 MS2 0 398.2 110 58.4734 16711 16711 16709 QEplus033719.raw F4 421.8 270.1 448.7 427 320.7 500.8 70 4.42 1 FALSE 1.14E-05 9.00E-09 1.626 -250 75274 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIWHNDNK [R].gIWHNDNk.[ST] N-Term(TMT6plex); K8(TMT6plex) 4 P07310; Q04447 Creatine kinase M-type OS=Mus musculus OX=10090 GN=Ckm PE=1 SV=1;Creatine kinase B-type OS=Mus musculus OX=10090 GN=Ckb PE=1 SV=1 P07310; A0A0J9YKD4; Q04447; Q9D6U7 Creatine kinase M-type OS=Mus musculus OX=10090 GN=Ckm PE=1 SV=1; Creatine kinase OS=Mus musculus OX=10090 GN=Ckm PE=1 SV=1; Creatine kinase B-type OS=Mus musculus OX=10090 GN=Ckb PE=1 SV=1; Creatine kinase OS=Mus musculus OX=10090 GN=Ckm PE=2 SV=1 0 3 3 0.5434 0 1 1 1 481.27081 1441.79789 1441.79522 1.85 0.00089 0/0 0 0 95453752 HCD 30 MS2 22.5247 1036.6 18.948 58.4779 16713 16713 16709 QEplus033719.raw F4 1146.8 334.3 985 1624.6 435.6 1693.3 320 3.92 2 FALSE 1.14E-05 0.0001856 0.806 -250 75283 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TMAITPR [R].tMAITPR.[H] N-Term(TMT6plex) 2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q80U36; Q9JHU4 MKIAA0325 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 2 2 0.3836 0 1 1 1 509.80032 1018.59337 1018.59167 1.67 0.00085 0/0 0 0 58983736 HCD 30 MS2 50.48502 827.3 12.385 58.4802 16714 16714 16709 QEplus033719.raw F4 812.8 628.7 891.6 709.4 984.6 936.5 358 2.19 1 FALSE 0.00131 0.01784 0.301 -250 75315 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGPEADSEWR [R].kGPEADSEWR.[R] N-Term(TMT6plex); K1(TMT6plex) 2 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.5468 0 1 1 1 544.96362 1632.87632 1632.87459 1.06 0.00058 0/0 0 0 28630780 HCD 30 MS2 61.58494 858.4 29.85 58.4892 16718 16718 16709 QEplus033719.raw F4 1158.4 586.8 905.2 806.5 802.9 890.3 328 2.78 1 FALSE 5.44E-05 0.001718 0.613 -250 75321 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIAPCQK [R].tIAPcQk.[A] N-Term(TMT6plex); C5(Carbamidomethyl); K7(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 0 2 2 0.2824 0 1 1 1 638.37927 1275.75127 1275.74951 1.38 0.00088 0/0 0 0 27097654 HCD 30 MS2 13.20837 1506.3 110 58.4917 16719 16719 16709 QEplus033719.raw F4 1679.1 1112.4 1559.6 1588.7 1369.7 1728.6 484 2.55 1 FALSE 0.002784 0.05468 0.129 -250 75342 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YRPGTVALR [R].yRPGTVALR.[E] N-Term(TMT6plex) 11 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; E0CZ27; E0CYR7; P68433; F8WI35; B9EI85; E0CYN1; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; H3.3 histone A (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; H3.3 histone A (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 0 3 3 0.5606 0 1 1 1 421.25781 1261.75888 1261.75782 0.84 0.00035 0/0 0 0 146593888 HCD 30 MS2 9.634512 400.2 8.28 58.5035 16723 16723 16720 QEplus033719.raw F4 370.6 499.2 449.8 250.7 505.8 325.3 571 3.71 2 FALSE 4.43E-05 0.00147 0.627 -250 75368 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGEEFEQK [K].qGEEFEQk.[I] N-Term(TMT6plex); K8(TMT6plex) 2 Q9R0Y5 Adenylate kinase isoenzyme 1 OS=Mus musculus OX=10090 GN=Ak1 PE=1 SV=1 Q9R0Y5-2; Q9R0Y5 Isoform 2 of Adenylate kinase isoenzyme 1 OS=Mus musculus OX=10090 GN=Ak1; Adenylate kinase isoenzyme 1 OS=Mus musculus OX=10090 GN=Ak1 PE=1 SV=1 0 2 2 0.567 0 1 1 1 726.89117 1452.77507 1452.77348 1.1 0.0008 0/0 0 0 25271740 HCD 30 MS2 0 1092.5 110 58.5105 16726 16726 16720 QEplus033719.raw F4 1339.8 546.1 962.9 1601.4 651.3 1453.6 307 3.21 1 FALSE 1.14E-05 0.0004749 0.727 -250 75386 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHPPELK [K].aHPPELk.[K] N-Term(TMT6plex); K7(TMT6plex) 1 P62309 Small nuclear ribonucleoprotein G OS=Mus musculus OX=10090 GN=Snrpg PE=1 SV=1 P62309 Small nuclear ribonucleoprotein G OS=Mus musculus OX=10090 GN=Snrpg PE=1 SV=1 0 3 3 0.5491 0 1 1 1 417.26086 1249.76804 1249.76688 0.93 0.00039 0/0 0 0 23461692 HCD 30 MS2 42.31099 680.3 41.643 58.5151 16728 16728 16720 QEplus033719.raw F4 626.4 652.7 756.3 516.4 791.4 738.5 328 3.26 1 FALSE 0.0006574 0.01002 0.404 -250 75396 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVDGDNSHVEMK [R].qVDGDNSHVEMk.[L] N-Term(TMT6plex); K12(TMT6plex) 2 Q62351 Transferrin receptor protein 1 OS=Mus musculus OX=10090 GN=Tfrc PE=1 SV=1 Q8C872; Q62351 Transferrin receptor protein 1 OS=Mus musculus OX=10090 GN=Tfrc PE=1 SV=1; Transferrin receptor protein 1 OS=Mus musculus OX=10090 GN=Tfrc PE=1 SV=1 0 3 3 0.7495 0 1 1 1 606.31451 1816.92899 1816.92637 1.44 0.00087 0/0 0 0 22488654 HCD 30 MS2 18.52139 1032.8 110 58.5176 16729 16729 16720 QEplus033719.raw F4 1172.6 582.8 984.6 1236.7 858.9 1361.1 233 5.47 1 FALSE 1.14E-05 1.83E-11 2.137 -250 75405 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADMETLQR [K].aDMETLQR.[I] N-Term(TMT6plex) 3 Q9D0R2 "Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2" Q3U630; Q9D0R2; Q99KJ4 "Threonyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1; Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2; Threonyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1" 0 2 2 0.5527 0 1 1 1 596.8139 1192.62053 1192.61934 1 0.0006 0/0 0 0 21022392 HCD 30 MS2 52.34936 1455.7 110 58.5201 16730 16730 16720 QEplus033719.raw F4 1468.6 1328.6 1708.6 1149.3 1352.7 1726.5 208 2.37 1 FALSE 1.14E-05 0.0004812 0.725 -250 75411 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHLAEK [R].vHLAEk.[G] N-Term(TMT6plex); K6(TMT6plex) 1 Q9Z1F9 SUMO-activating enzyme subunit 2 OS=Mus musculus OX=10090 GN=Uba2 PE=1 SV=1 Q9Z1F9 SUMO-activating enzyme subunit 2 OS=Mus musculus OX=10090 GN=Uba2 PE=1 SV=1 0 3 3 0.1196 0 1 1 1 385.58163 1154.73035 1154.72976 0.51 0.0002 0/0 0 0 22036842 HCD 30 MS2 37.68113 639.4 49.64 58.5274 16732 16732 16731 QEplus033719.raw F4 680.4 439.8 662 481.7 833.8 738.5 105 2.76 1 FALSE 0.005324 0.09103 0.031 -250 75421 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FNSAIR [K].fNSAIR.[G] N-Term(TMT6plex) 5 Q3UXT6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1 E9Q8F0; Q3UXT6; Q8VH51; Q8VH51-2; B7ZD61 RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1; RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2; Isoform 2 of RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39; RNA-binding protein 39 (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=1 0 2 2 0.2618 0 1 1 1 468.77716 936.54704 936.54643 0.65 0.00031 0/0 0 0 19205726 HCD 30 MS2 32.66031 913.7 50.746 58.5296 16733 16733 16731 QEplus033719.raw F4 1205.3 729.8 895.6 702.3 1086.7 862.7 66 1.91 1 FALSE 0.00574 0.0964 0.016 -250 75441 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEDGPK [K].kLEDGPk.[F] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 5 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 P10126; Q3UZQ3; Q4FZE5; Q3UA81; Q3TII3 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Eef1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1 1 2 2 0.4478 0 1 1 1 737.46686 1473.92644 1473.92439 1.39 0.00102 0/0 0 0 49775036 HCD 30 MS2 9.963526 702.8 41.755 58.5342 16735 16735 16731 QEplus033719.raw F4 958.8 465.1 737.1 737.4 681.7 636.4 313 2.3 1 FALSE 0.001607 0.02531 0.242 -250 75451 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLLHEK [R].qLLHEk.[I] N-Term(TMT6plex); K6(TMT6plex) 4 Q6NXX7 Abce1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1 Q6NXX7; Q3TJM9; Q3UHY8; Q3TIU8 Abce1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1 0 3 3 0.1494 0 1 1 2 409.26093 1225.76822 1225.76688 1.1 0.00045 0/0 0 0 32767506 HCD 30 MS2 32.84169 663.6 27.27 58.5364 16736 16736 16731 QEplus033719.raw F4 833.9 487.6 614 580.9 806.5 658.9 191 3.28 1 FALSE 0.0009259 0.01267 0.364 -250 75461 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMEELHNQEVQK [R].rMEELHNQEVQk.[R] N-Term(TMT6plex); K12(TMT6plex) 6 Q3TMM5; Q3UM20 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1 Q3TMM5; Q3TTV7; Q3TFC2; Q3UM20; Q3TF40; Q99K48 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Non-POU domain-containing octamer-binding protein OS=Mus musculus OX=10090 GN=Nono PE=1 SV=3 1 4 4 0.6248 0 1 1 1 500.52585 1999.08156 1999.07951 1.02 0.00051 0/0 0 0 24704106 HCD 30 MS2 15.16538 635.5 54.166 58.5387 16737 16737 16731 QEplus033719.raw F4 667.3 610.2 683.6 466 737.6 648.4 427 6.37 2 FALSE 1.14E-05 1.16E-10 1.985 -250 75474 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WHAVSSK [K].wHAVSSk.[V] N-Term(TMT6plex); K7(TMT6plex) 14 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 Q9QXZ0-3; B1ARU4; E9QA63; Q80TZ5; E9QNP1; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8 Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; MKIAA0465 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 3 3 0.4911 0 1 1 1 424.92084 1272.74796 1272.74648 1.16 0.00049 0/0 0 0 11788480 HCD 30 MS2 63.81411 1049 74.516 58.5432 16739 16739 16731 QEplus033719.raw F4 1360.3 715.1 1105.1 913.1 983.7 1216.6 356 3.36 3 FALSE 0.001506 0.02209 0.264 -250 75481 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQVWHEEHR [R].iQVWHEEHR.[G] N-Term(TMT6plex) 3 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4; Q3TZQ2 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 0 2 2 0.6658 0 1 1 1 731.89246 1462.77764 1462.77526 1.62 0.00119 0/0 0 0 7879175 HCD 30 MS2 18.90524 359.4 110 58.5457 16740 16740 16731 QEplus033719.raw F4 313.6 357.2 441.2 290.7 367.7 385.7 305 3.65 1 FALSE 1.14E-05 2.28E-06 1.17 -250 75491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TFQDGATK [K].tFQDGATk.[L] N-Term(TMT6plex); K8(TMT6plex) 25 E9Q6L0; A2RRR3 CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2;Clasp2 protein OS=Mus musculus OX=10090 GN=Clasp2 PE=2 SV=1 E9Q6L0; A2RRR3; Q80TV8-2; A0A087WNW8; Q80TV8; E9Q8N5; A0A087WQ31; A0A087WRK0; E9QNY9; E9QKH0; F7DCH5; Q8BRT1; B9EJA4; A5D6Q8; A0A0A6YXZ1; A0A087WQ95; B2RY22; A0A087WS18; Q08EB5; A0A087WP42; A0A087WRE8; J3QP81; A0A0A6YWK1; A0A087WQF1; Q08EB6 CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; Clasp2 protein OS=Mus musculus OX=10090 GN=Clasp2 PE=2 SV=1; Isoform 2 of CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 2 OS=Mus musculus OX=10090 GN=Clasp2 PE=1 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 2 OS=Mus musculus OX=10090 GN=Clasp2 PE=1 SV=1; CLIP-associating protein 2 OS=Mus musculus OX=10090 GN=Clasp2 PE=1 SV=1; Clasp2 protein OS=Mus musculus OX=10090 GN=Clasp2 PE=2 SV=1; Clasp1 protein OS=Mus musculus OX=10090 GN=Clasp1 PE=2 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; Clasp1 protein OS=Mus musculus OX=10090 GN=Clasp1 PE=2 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 2 OS=Mus musculus OX=10090 GN=Clasp2 PE=1 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=1; CLIP-associating protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 1 OS=Mus musculus OX=10090 GN=Clasp1 PE=1 SV=2; CLIP-associating protein 2 OS=Mus musculus OX=10090 GN=Clasp2 PE=1 SV=1 0 2 2 0.5273 0 1 1 1 663.37976 1325.75224 1325.74654 4.31 0.00285 0/0 0 0 7464986.5 HCD 30 MS2 30.11217 916 110 58.5482 16741 16741 16731 QEplus033719.raw F4 928.6 653.6 984.8 847.4 1035.5 1046.2 299 2.56 2 FALSE 1.14E-05 0.0006525 0.699 -250 75507 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIWHNDNK [R].gIWHNDNk.[ST] N-Term(TMT6plex); K8(TMT6plex) 4 P07310; Q04447 Creatine kinase M-type OS=Mus musculus OX=10090 GN=Ckm PE=1 SV=1;Creatine kinase B-type OS=Mus musculus OX=10090 GN=Ckb PE=1 SV=1 P07310; A0A0J9YKD4; Q04447; Q9D6U7 Creatine kinase M-type OS=Mus musculus OX=10090 GN=Ckm PE=1 SV=1; Creatine kinase OS=Mus musculus OX=10090 GN=Ckm PE=1 SV=1; Creatine kinase B-type OS=Mus musculus OX=10090 GN=Ckb PE=1 SV=1; Creatine kinase OS=Mus musculus OX=10090 GN=Ckm PE=2 SV=1 0 2 2 0.6064 0 1 1 1 721.40198 1441.79668 1441.79522 1.01 0.00073 0/0 0 0 28804152 HCD 30 MS2 4.625233 1159.1 110 58.558 16744 16744 16742 QEplus033719.raw F4 1240.4 224.2 1073.1 2118.1 204 2094.6 300 2.82 2 FALSE 1.14E-05 0.0004361 0.734 -250 75523 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AFTGEGQK [K].aFTGEGQk.[L] N-Term(TMT6plex); K8(TMT6plex) 5 Q3UVN5 NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1 Q3KQQ1; Q9CZ44-2; Q3UVN5; Q9CZ44; A2AT02 NSFL1 cofactor p47 (Fragment) OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1; Isoform 2 of NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=1 SV=1; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=1 SV=1 0 2 2 0.4006 0 1 1 1 648.37213 1295.73699 1295.73597 0.78 0.00051 0/0 0 0 23946566 HCD 30 MS2 19.79948 1276.8 110 58.565 16747 16747 16742 QEplus033719.raw F4 1341.3 1078.3 1379.4 1062.9 1474.1 1325 402 3.17 1 FALSE 1.14E-05 0.000181 0.808 -250 75532 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLINPDR [R].sLINPDR.[Y] N-Term(TMT6plex) 4 Q6NXX7 Abce1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1 Q6NXX7; Q3TJM9; Q3UHY8; Q3TIU8 Abce1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1 0 2 2 0.4462 0 1 1 1 522.30609 1043.60491 1043.60467 0.22 0.00012 0/0 0 0 22771066 HCD 30 MS2 32.02549 963.3 73.531 58.5673 16748 16748 16742 QEplus033719.raw F4 998.1 837.9 976 833.1 1077.3 1057.1 167 2.51 1 FALSE 0.0002814 0.005727 0.484 -250 75541 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSELIAK [K].rSELIAk.[I] N-Term(TMT6plex); K7(TMT6plex) 5 A2BE93; Q9EQU5-2 Protein SET (Fragment) OS=Mus musculus OX=10090 GN=Set PE=1 SV=1;Isoform 2 of Protein SET OS=Mus musculus OX=10090 GN=Set Q5U445; A2BE93; Q9EQU5-2; A2BE92; Q3T9S3 cDNA sequence BC085271 OS=Mus musculus OX=10090 GN=BC085271 PE=2 SV=1; Protein SET (Fragment) OS=Mus musculus OX=10090 GN=Set PE=1 SV=1; Isoform 2 of Protein SET OS=Mus musculus OX=10090 GN=Set; Protein SET (Fragment) OS=Mus musculus OX=10090 GN=Set PE=1 SV=1; SET translocation OS=Mus musculus OX=10090 GN=Set PE=2 SV=1 1 3 3 0.2927 0 1 1 1 425.61118 1274.81897 1274.81964 -0.52 -0.00022 0/0 0 0 21167018 HCD 30 MS2 47.77427 867.5 32.22 58.5696 16749 16749 16742 QEplus033719.raw F4 1070.1 738.4 898 655.5 974.5 868.8 315 3.86 2 FALSE 1.14E-05 0.0004505 0.731 -250 75550 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LELQGSNSR [R].lELQGSNSR.[S] N-Term(TMT6plex) 6 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 2 2 0.6035 0 1 1 1 616.84149 1232.67571 1232.67963 -3.18 -0.00196 0/0 0 0 18803732 HCD 30 MS2 14.87268 1232.1 110 58.5721 16750 16750 16742 QEplus033719.raw F4 1219.4 1154.5 1370.1 929 1479.6 1240 267 2.85 1 FALSE 1.14E-05 9.61E-05 0.86 -250 75593 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YRPGTVALR [R].yRPGTVALR.[E] N-Term(TMT6plex) 11 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; E0CZ27; E0CYR7; P68433; F8WI35; B9EI85; E0CYN1; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; H3.3 histone A (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; H3.3 histone A (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 0 2 2 0.3828 0 1 1 1 631.38306 1261.75884 1261.75782 0.8 0.00051 0/0 0 0 91619528 HCD 30 MS2 30.33883 464.6 19.157 58.5886 16756 16756 16753 QEplus033719.raw F4 438.4 478.6 517.3 370.2 570.1 413.2 571 2.09 2 FALSE 0.008027 0.1341 -0.066 -250 75611 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQTEAGEYSR [R].lQTEAGEYSR.[Q] N-Term(TMT6plex) 2 P13542 Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.3801 0 1 1 1 691.85974 1382.71221 1382.71132 0.64 0.00044 0/0 0 0 24124352 HCD 30 MS2 0 667.8 110 58.5957 16759 16759 16753 QEplus033719.raw F4 633.6 171.1 431.9 1403.9 222.6 1143.7 184 3.71 1 FALSE 1.14E-05 6.28E-07 1.276 -250 75620 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LIAAQTGTR [K].lIAAQTGTR.[W] N-Term(TMT6plex) 6 E0CYW1 Ubiquitin-like protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ubl5 PE=1 SV=1 E0CYW1; E0CY38; Q9EPV8; E0CZB3; E0CY91; A0A1Y7VKT9 Ubiquitin-like protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ubl5 PE=1 SV=1; Ubiquitin-like protein 5 OS=Mus musculus OX=10090 GN=Ubl5 PE=4 SV=1; Ubiquitin-like protein 5 OS=Mus musculus OX=10090 GN=Ubl5 PE=1 SV=1; Ubiquitin-like protein 5 OS=Mus musculus OX=10090 GN=Ubl5 PE=1 SV=1; Ubiquitin-like protein 5 OS=Mus musculus OX=10090 GN=Ubl5 PE=4 SV=1; Ubiquitin-like protein 5 OS=Mus musculus OX=10090 GN=Ubl5b PE=4 SV=1 0 2 2 0.4607 0 1 1 1 580.35486 1159.70244 1159.69964 2.42 0.0014 0/0 0 0 18088404 HCD 30 MS2 42.91299 948.4 70.314 58.5979 16760 16760 16753 QEplus033719.raw F4 996 804.4 1004.1 730.4 1139 1016.5 307 2.67 1 FALSE 1.14E-05 9.66E-05 0.86 -250 75637 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLEAQADK [K].sLEAQADk.[Y] N-Term(TMT6plex); K8(TMT6plex) 3 P58774 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1 Q9D1R6; P58774; Q61344 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1 0 2 2 0.4358 0 1 1 1 660.38263 1319.75798 1319.7571 0.67 0.00044 0/0 0 0 9586955 HCD 30 MS2 47.91911 1171.7 110 58.605 16763 16763 16753 QEplus033719.raw F4 1438.8 693.1 1207.4 1257.2 956.6 1476.9 526 2.96 1 FALSE 1.14E-05 4.41E-05 0.925 -250 75646 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDGISAAK [K].eDGISAAk.[D] N-Term(TMT6plex); K8(TMT6plex) 2 P18872-2 Isoform Alpha-2 of Guanine nucleotide-binding protein G(o) subunit alpha OS=Mus musculus OX=10090 GN=Gnao1 P18872-2; P18872 Isoform Alpha-2 of Guanine nucleotide-binding protein G(o) subunit alpha OS=Mus musculus OX=10090 GN=Gnao1; Guanine nucleotide-binding protein G(o) subunit alpha OS=Mus musculus OX=10090 GN=Gnao1 PE=1 SV=3 0 2 2 0.4839 0 1 1 1 624.86359 1248.7199 1248.71999 -0.07 -0.00005 0/0 0 0 12314099 HCD 30 MS2 6.975727 1085.1 110 58.6123 16765 16765 16764 QEplus033719.raw F4 1073.3 1013.3 1188.5 968.3 1182.4 1084.9 478 2.48 1 FALSE 1.14E-05 0.0003784 0.746 -250 75660 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KDDEVQVVR [R].kDDEVQVVR.[G] N-Term(TMT6plex); K1(TMT6plex) 3 Q4FZH2 Ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1 Q3U7N1; B1ARA3; Q4FZH2 KOW domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; 60S ribosomal protein L26 (Fragment) OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1; Ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1 1 3 3 0.7283 0 1 1 1 515.97186 1545.90104 1545.90008 0.62 0.00032 0/0 0 0 62408848 HCD 30 MS2 8.368615 1011.5 32.315 58.6171 16767 16767 16764 QEplus033719.raw F4 1019.8 875.7 1133.3 846.7 1058 1135.6 511 3.68 1 FALSE 1.14E-05 3.53E-05 0.943 -250 75668 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FDETTADGRK [K].fDETTADGRk.[T] N-Term(TMT6plex); K10(TMT6plex) 2 Q497I3 "Fatty acid binding protein 5, epidermal OS=Mus musculus OX=10090 GN=Fabp5 PE=1 SV=1" Q497I3; Q3TLH6 "Fatty acid binding protein 5, epidermal OS=Mus musculus OX=10090 GN=Fabp5 PE=1 SV=1; FABP domain-containing protein OS=Mus musculus OX=10090 GN=Fabp5 PE=2 SV=1" 1 3 3 0.7027 0 1 1 1 533.29156 1597.86014 1597.85861 0.96 0.00051 0/0 0 0 46805056 HCD 30 MS2 21.18382 924.1 33.929 58.6193 16768 16768 16764 QEplus033719.raw F4 943.3 860.1 977 561.9 1378.7 823.7 347 2.96 1 FALSE 1.14E-05 0.0005277 0.718 -250 75683 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VFGAHK [K].vFGAHk.[D] N-Term(TMT6plex); K6(TMT6plex) 6 G3X8Y1; Q9ERP3 Tripartite motif-containing 55 OS=Mus musculus OX=10090 GN=Trim55 PE=1 SV=1;Tripartite motif-containing protein 54 OS=Mus musculus OX=10090 GN=Trim54 PE=1 SV=1 Q8C6Y1; G3X8Y1; Q3KNI7; Q9ERP3; Q3KNI8; E9QAT9 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Trim55 PE=2 SV=1; Tripartite motif-containing 55 OS=Mus musculus OX=10090 GN=Trim55 PE=1 SV=1; Trim54 protein OS=Mus musculus OX=10090 GN=Trim54 PE=2 SV=1; Tripartite motif-containing protein 54 OS=Mus musculus OX=10090 GN=Trim54 PE=1 SV=1; Trim54 protein OS=Mus musculus OX=10090 GN=Trim54 PE=2 SV=1; Tripartite motif-containing protein 54 OS=Mus musculus OX=10090 GN=Trim54 PE=1 SV=1 0 3 3 0.4682 0 1 1 1 372.90289 1116.69413 1116.69299 1.02 0.00038 0/0 0 0 12773508 HCD 30 MS2 24.01312 697.4 62.276 58.6238 16770 16770 16764 QEplus033719.raw F4 838.3 238.5 762.5 1003.7 373.2 968.3 220 2.99 2 FALSE 5.44E-05 0.001925 0.602 -250 75693 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHLMYAVR [K].sHLMYAVR.[E] N-Term(TMT6plex) 14 E9Q7M2 "TSC22 domain family, member 2 OS=Mus musculus OX=10090 GN=Tsc22d2 PE=1 SV=1" Q9CVK3; H3BLI9; Q3U1C5; D3Z0V7; E9Q7M2; P62500-3; A0A0G2JFZ4; Q148S0; P62500-2; E9QLZ1; D3YW86; P62500; A7LCN1; Q6PE86 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tsc22d2 PE=2 SV=2; TSC22 domain family protein 1 OS=Mus musculus OX=10090 GN=Tsc22d1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tsc22d2 PE=2 SV=1; TSC22 domain family protein 1 OS=Mus musculus OX=10090 GN=Tsc22d1 PE=1 SV=1; TSC22 domain family, member 2 OS=Mus musculus OX=10090 GN=Tsc22d2 PE=1 SV=1; Isoform 3 of TSC22 domain family protein 1 OS=Mus musculus OX=10090 GN=Tsc22d1; TSC22 domain family, member 2 OS=Mus musculus OX=10090 GN=Tsc22d2 PE=1 SV=1; Tsc22d2 protein OS=Mus musculus OX=10090 GN=Tsc22d2 PE=2 SV=1; Isoform 2 of TSC22 domain family protein 1 OS=Mus musculus OX=10090 GN=Tsc22d1; TSC22 domain family protein 1 OS=Mus musculus OX=10090 GN=Tsc22d1 PE=1 SV=1; TSC22 domain family protein 1 OS=Mus musculus OX=10090 GN=Tsc22d1 PE=1 SV=1; TSC22 domain family protein 1 OS=Mus musculus OX=10090 GN=Tsc22d1 PE=1 SV=2; TSC22D2 isoform 4 OS=Mus musculus OX=10090 GN=Tsc22d2 PE=2 SV=1; Tsc22d2 protein (Fragment) OS=Mus musculus OX=10090 GN=Tsc22d2 PE=2 SV=1" 0 3 3 0.125 0 1 1 1 402.56049 1205.6669 1205.66623 0.56 0.00023 0/0 0 0 9411459 HCD 30 MS2 43.15338 600 78.016 58.6261 16771 16771 16764 QEplus033719.raw F4 537.6 510 668.5 482.4 735.5 665.9 383 3.04 1 FALSE 0.002561 0.05049 0.141 -250 75702 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KDDEVQVVR [R].kDDEVQVVR.[G] N-Term(TMT6plex); K1(TMT6plex) 3 Q4FZH2 Ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1 Q3U7N1; B1ARA3; Q4FZH2 KOW domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; 60S ribosomal protein L26 (Fragment) OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1; Ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1 1 2 2 0.6704 0 1 1 1 773.45459 1545.9019 1545.90008 1.18 0.00091 0/0 0 0 3534391.5 HCD 30 MS2 0 305.5 110 58.6311 16773 16773 16764 QEplus033719.raw F4 300.9 303.2 354.6 232.2 325.9 316.3 488 2.7 1 FALSE 1.14E-05 9.61E-06 1.051 -250 75727 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGHITVEK [R].tGHITVEk.[I] N-Term(TMT6plex); K8(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.4711 0 1 1 1 448.27554 1342.81208 1342.80947 1.94 0.00087 0/0 0 0 33125982 HCD 30 MS2 28.27038 630.1 31.733 58.6474 16779 16779 16775 QEplus033719.raw F4 733.5 521.8 614 582.1 751.9 577.6 303 3.29 2 FALSE 1.14E-05 0.0008757 0.674 -250 75735 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MYSYPAR [R].mYSYPAR.[V] N-Term(TMT6plex) 6 Q9Z204-2; Q9Z204-3 Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc;Isoform 3 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc Q3U6P5; Q9Z204; Q9Z204-5; Q9Z204-2; Q9Z204-4; Q9Z204-3 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Hnrnpc PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc PE=1 SV=1; Isoform 5 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform C1 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform 4 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc; Isoform 3 of Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Mus musculus OX=10090 GN=Hnrnpc 0 2 2 0.5602 0 1 1 1 558.78979 1116.57231 1116.57093 1.24 0.00069 0/0 0 0 22515430 HCD 30 MS2 42.0508 764.2 49.302 58.6497 16780 16780 16775 QEplus033719.raw F4 743.1 630.4 834.4 691.6 851.9 834 85 2.16 2 FALSE 0.004873 0.08517 0.048 -250 75740 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVSEADLR [K].dVSEADLR.[I] N-Term(TMT6plex) 3 B9EKC3 Rho GTPase activating protein 5 OS=Mus musculus OX=10090 GN=Arhgap5 PE=2 SV=1 B9EKC3; P97393; E9PYT0 Rho GTPase activating protein 5 OS=Mus musculus OX=10090 GN=Arhgap5 PE=2 SV=1; Rho GTPase-activating protein 5 OS=Mus musculus OX=10090 GN=Arhgap5 PE=1 SV=2; Rho GTPase-activating protein 5 OS=Mus musculus OX=10090 GN=Arhgap5 PE=1 SV=1 0 2 2 0.186 0 1 1 1 567.30377 1133.60027 1133.59998 0.25 0.00014 0/0 0 0 13417297 HCD 30 MS2 24.03518 801.3 110 58.6522 16781 16781 16775 QEplus033719.raw F4 792.3 532.3 798.5 934.7 726.6 1023.6 236 1.72 1 FALSE 0.002628 0.05189 0.137 -250 75747 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMEELHNQEVQK [R].rMEELHNQEVQk.[R] N-Term(TMT6plex); K12(TMT6plex) 6 Q3TMM5; Q3UM20 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1 Q3TMM5; Q3TTV7; Q3TFC2; Q3UM20; Q3TF40; Q99K48 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Non-POU domain-containing octamer-binding protein OS=Mus musculus OX=10090 GN=Nono PE=1 SV=3 1 3 3 0.6775 0 1 1 1 667.03235 1999.08249 1999.07951 1.49 0.00099 0/0 0 0 12191029 HCD 30 MS2 0 486.4 110 58.6547 16782 16782 16775 QEplus033719.raw F4 492.9 478.7 539.9 375.4 546.4 484.8 439 5.52 2 FALSE 1.14E-05 1.65E-12 2.336 -250 75756 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVVFNNR [R].aVVFNNR.[G] N-Term(TMT6plex) 2 Q9QZC8 Protein ABHD1 OS=Mus musculus OX=10090 GN=Abhd1 PE=1 SV=2 Q9QZC8; A0A571BE63 Protein ABHD1 OS=Mus musculus OX=10090 GN=Abhd1 PE=1 SV=2; Protein ABHD1 OS=Mus musculus OX=10090 GN=Abhd1 PE=1 SV=1 0 2 2 0.4775 0 1 1 1 524.81104 1048.61479 1048.61009 4.48 0.00235 0/0 0 0 12064046 HCD 30 MS2 38.104 1721.4 110 58.6572 16783 16783 16775 QEplus033719.raw F4 2261.1 1138 1899.5 1592.6 1447.3 1990 127 1.78 1 FALSE 0.005324 0.09078 0.032 -250 75766 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RIAQAVEK [K].rIAQAVEk.[K] N-Term(TMT6plex); K8(TMT6plex) 2 P21550 Beta-enolase OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=3 J3QPZ9; P21550 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=1; Beta-enolase OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=3 1 2 2 0.2977 0 1 1 1 686.93689 1372.8665 1372.86765 -0.84 -0.00058 0/0 0 0 3629841.5 HCD 30 MS2 21.82902 415 110 58.6622 16785 16785 16775 QEplus033719.raw F4 518.1 260.8 390.2 473.4 338.9 508.6 357 2.62 1 FALSE 0.001101 0.01426 0.342 -250 75776 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITITNDQNR [K].iTITNDQNR.[L] N-Term(TMT6plex) 7 P20029 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q3U9G2; Q3U7T8; Q3TI47 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1 0 2 2 0.7055 0 1 1 1 652.36224 1303.71721 1303.71674 0.36 0.00023 0/0 0 0 12254743 HCD 30 MS2 25.50844 724.2 110 58.6695 16787 16787 16786 QEplus033719.raw F4 769 529.3 652.1 611.9 1036.7 746.5 377 3.09 1 FALSE 1.14E-05 1.81E-05 0.998 -250 75794 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIDTAAK [R].dIDTAAk.[F] N-Term(TMT6plex); K7(TMT6plex) 4 Q9CR84 "ATP synthase F(0) complex subunit C1, mitochondrial OS=Mus musculus OX=10090 GN=Atp5mc1 PE=1 SV=1" Q9CR84; P56383; P56384; A0A087WQS5 "ATP synthase F(0) complex subunit C1, mitochondrial OS=Mus musculus OX=10090 GN=Atp5mc1 PE=1 SV=1; ATP synthase F(0) complex subunit C2, mitochondrial OS=Mus musculus OX=10090 GN=Atp5mc2 PE=1 SV=2; ATP synthase F(0) complex subunit C3, mitochondrial OS=Mus musculus OX=10090 GN=Atp5mc3 PE=1 SV=1; ATP synthase, H+-transporting, mitochondrial F0 complex, subunit C2 (subunit 9) (Fragment) OS=Mus musculus OX=10090 GN=Atp5g2 PE=3 SV=1" 0 2 2 0.4161 0 1 1 1 596.35321 1191.69914 1191.69852 0.52 0.00031 0/0 0 0 126407824 HCD 30 MS2 35.03199 922.7 8.735 58.6763 16790 16790 16786 QEplus033719.raw F4 595.4 1044.2 1570.3 478 286 1562.1 464 2.86 1 FALSE 0.0003496 0.006907 0.46 -250 75802 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVVPQGGPHSLR [R].sVVPQGGPHSLR.[C] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 3 3 0.6733 0 1 1 1 488.28342 1462.8357 1462.83278 2 0.00097 0/0 0 0 33403700 HCD 30 MS2 52.73539 765.4 33.84 58.6786 16791 16791 16786 QEplus033719.raw F4 843.7 638.3 900.5 649.4 789.6 770.9 503 5.02 2 FALSE 1.14E-05 2.31E-08 1.548 -250 75810 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAFTTR [K].vAFTTR.[I] N-Term(TMT6plex) 9 P62838 Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus OX=10090 GN=Ube2d2 PE=1 SV=1 P61079; Q9D7F5; A0A0G2JGL0; P62838; Q3U5V6; A0A0G2JE32; Q9D1S1; A0A0G2JGZ3; A0A494BA56 Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus OX=10090 GN=Ube2d3 PE=1 SV=1; UBC core domain-containing protein OS=Mus musculus OX=10090 GN=Ube2d3 PE=2 SV=1; Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus OX=10090 GN=Ube2d3 PE=1 SV=1; Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus OX=10090 GN=Ube2d2 PE=1 SV=1; UBC core domain-containing protein OS=Mus musculus OX=10090 GN=Ube2d3 PE=2 SV=1; Ubiquitin-conjugating enzyme E2 D3 (Fragment) OS=Mus musculus OX=10090 GN=Ube2d3 PE=1 SV=1; UBC core domain-containing protein OS=Mus musculus OX=10090 GN=Ube2d3 PE=2 SV=1; Ubiquitin-conjugating enzyme E2 D3 (Fragment) OS=Mus musculus OX=10090 GN=Ube2d3 PE=1 SV=1; Ubiquitin-conjugating enzyme E2D 2A (Fragment) OS=Mus musculus OX=10090 GN=Ube2d2a PE=1 SV=1 0 2 2 0.5164 0 1 1 1 462.27975 923.55223 923.55118 1.14 0.00053 0/0 0 0 28266690 HCD 30 MS2 48.02262 963.2 32.63 58.6808 16792 16792 16786 QEplus033719.raw F4 1138.9 751.6 1030.1 671.3 1061.4 1126.2 38 2.13 1 FALSE 0.004038 0.07468 0.075 -250 75820 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FHSQLMR [K].fHSQLMR.[L] N-Term(TMT6plex) 2 Q5EAT0 Signal recognition particle 9 kDa protein OS=Mus musculus OX=10090 GN=Srp9 PE=1 SV=1 Q5EAT0; D3YZX8 Signal recognition particle 9 kDa protein OS=Mus musculus OX=10090 GN=Srp9 PE=1 SV=1; Signal recognition particle 9 kDa protein OS=Mus musculus OX=10090 GN=Srp9 PE=1 SV=1 0 3 3 0.3868 0 1 1 1 383.21298 1147.62439 1147.62436 0.03 0.00001 0/0 0 0 25619204 HCD 30 MS2 50.41896 499.4 34.397 58.6853 16794 16794 16786 QEplus033719.raw F4 573.8 367.8 494.8 400.2 659.3 500.5 272 2.87 1 FALSE 0.0006216 0.009164 0.418 -250 75833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDPNFK [R].sDPNFk.[N] N-Term(TMT6plex); K6(TMT6plex) 2 Q9DCC8 Mitochondrial import receptor subunit TOM20 homolog OS=Mus musculus OX=10090 GN=Tomm20 PE=1 SV=1 Q9DCC8; A0A1D5RLZ6 Mitochondrial import receptor subunit TOM20 homolog OS=Mus musculus OX=10090 GN=Tomm20 PE=1 SV=1; Mitochondrial import receptor subunit TOM20 homolog OS=Mus musculus OX=10090 GN=Tomm20 PE=1 SV=1 0 2 2 0.5106 0 1 1 1 583.33514 1165.66301 1165.66174 1.09 0.00063 0/0 0 0 25463558 HCD 30 MS2 9.164072 1514.7 110 58.6901 16796 16796 16786 QEplus033719.raw F4 1627.3 1083.2 1565.9 1599.5 1552.3 1659.7 291 2.35 1 FALSE 0.004222 0.07745 0.068 -250 75842 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGEEFEQK [K].qGEEFEQk.[I] N-Term(TMT6plex); K8(TMT6plex) 2 Q9R0Y5 Adenylate kinase isoenzyme 1 OS=Mus musculus OX=10090 GN=Ak1 PE=1 SV=1 Q9R0Y5-2; Q9R0Y5 Isoform 2 of Adenylate kinase isoenzyme 1 OS=Mus musculus OX=10090 GN=Ak1; Adenylate kinase isoenzyme 1 OS=Mus musculus OX=10090 GN=Ak1 PE=1 SV=1 0 3 3 0.4252 0 1 1 1 484.92957 1452.77414 1452.77348 0.46 0.00022 0/0 0 0 22792264 HCD 30 MS2 8.316131 938.6 84.316 58.6974 16798 16798 16797 QEplus033719.raw F4 1113.7 635.2 932.7 1005 847.6 1097.6 297 2.94 1 FALSE 0.0006035 0.008966 0.422 -250 75856 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGPGATAGGAEK [R].mGPGATAGGAEk.[S] N-Term(TMT6plex); K12(TMT6plex) 6 Q0PD67 Rab1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1 Q5SW87; Q0PD67; Q3UB66; Q5SW86; Q5SW88; Q6ZPF0 "RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; Rab1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab1a PE=2 SV=1; RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; MKIAA3012 protein (Fragment) OS=Mus musculus OX=10090 GN=Rab1a PE=2 SV=1" 0 3 3 0.6558 0 1 1 1 502.27792 1504.81922 1504.81938 -0.11 -0.00006 0/0 0 0 23493570 HCD 30 MS2 11.9444 632.8 41.028 58.7042 16801 16801 16797 QEplus033719.raw F4 600.1 520 689.3 540.8 708.9 737.7 345 5.84 1 FALSE 1.14E-05 9.88E-13 2.378 -250 75861 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLDSGSASMAK [K].rLDSGSASMAk.[Y] N-Term(TMT6plex); K11(TMT6plex) 2 P51174 "Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=2" A0A0R4J083; P51174 "Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=1; Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=2" 1 3 3 0.7166 0 1 1 1 527.633 1580.88443 1580.88305 0.88 0.00046 0/0 0 0 16926026 HCD 30 MS2 23.89734 1159.3 110 58.7067 16802 16802 16797 QEplus033719.raw F4 1401.4 921 1224.7 1189.4 1011 1208.4 379 5.47 1 FALSE 1.14E-05 3.63E-12 2.27 -250 75879 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSFIGENSR [R].dSFIGENSR.[T] N-Term(TMT6plex) 8 P28740-1 Isoform 1 of Kinesin-like protein KIF2A OS=Mus musculus OX=10090 GN=Kif2a P28740-1; Q922S8; Q3TTL2; P28740; E0CZ72; Q8BU22; P28740-2; F8VQ42 Isoform 1 of Kinesin-like protein KIF2A OS=Mus musculus OX=10090 GN=Kif2a; Kinesin-like protein KIF2C OS=Mus musculus OX=10090 GN=Kif2c PE=1 SV=1; Kinesin-like protein OS=Mus musculus OX=10090 GN=Kif2c PE=1 SV=1; Kinesin-like protein KIF2A OS=Mus musculus OX=10090 GN=Kif2a PE=1 SV=2; Kinesin-like protein OS=Mus musculus OX=10090 GN=Kif2a PE=1 SV=1; Kinesin-like protein OS=Mus musculus OX=10090 GN=Kif2c PE=2 SV=1; Isoform 2 of Kinesin-like protein KIF2A OS=Mus musculus OX=10090 GN=Kif2a; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif2a PE=1 SV=1 0 2 2 0.489 0 1 1 1 627.31934 1253.6314 1253.63235 -0.76 -0.00048 0/0 0 0 3586881.5 HCD 30 MS2 0 603.6 110 58.7192 16807 16807 16797 QEplus033719.raw F4 603 527.1 646.3 488.3 755.6 601.3 126 3.17 1 FALSE 1.14E-05 0.0004419 0.733 -250 75895 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQEGGIVSK [K].qQEGGIVSk.[N] N-Term(TMT6plex); K9(TMT6plex) 1 Q9JK92 Heat shock protein beta-8 OS=Mus musculus OX=10090 GN=Hspb8 PE=1 SV=1 Q9JK92 Heat shock protein beta-8 OS=Mus musculus OX=10090 GN=Hspb8 PE=1 SV=1 0 2 2 0.3946 0 1 1 1 702.41632 1403.82536 1403.82585 -0.35 -0.00024 0/0 0 0 11367634 HCD 30 MS2 24.74911 947.7 110 58.729 16810 16810 16808 QEplus033719.raw F4 951 640.6 1015.5 978.1 825.3 1275.7 529 3.32 1 FALSE 1.14E-05 2.03E-06 1.179 -250 75913 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVQGPPGPTGKPGR [R].gVQGPPGPTGkPGR.[R] N-Term(TMT6plex); K11(TMT6plex) 2 B1AWB9; O88207-2 "Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1;Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1" B1AWB9; O88207-2 "Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1; Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1" 0 3 3 0.7122 0 1 1 1 588.35004 1763.03556 1763.03282 1.55 0.00091 0/0 0 0 8600543 HCD 30 MS2 10.64855 813.9 110 58.7362 16813 16813 16808 QEplus033719.raw F4 823.5 683.7 912.1 519.3 1052.5 892.4 446 4.1 2 FALSE 1.14E-05 2.36E-11 2.116 -250 75920 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TKYETDAIQR [R].tkYETDAIQR.[T] N-Term(TMT6plex); K2(TMT6plex) 13 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; B2RWX0; B2RQQ1; I6L963; B1AR69; B2RY26; B2RXX9; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 3 3 0.4721 0 1 1 1 561.65485 1682.94999 1682.94776 1.32 0.00074 0/0 0 0 8518152 HCD 30 MS2 27.15593 914.7 110 58.7387 16814 16814 16808 QEplus033719.raw F4 1083.4 370 766.9 1652 456.6 1159 370 2.69 5 FALSE 4.43E-05 0.001519 0.624 -250 75929 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DALEGEK [K].dALEGEk.[NK] N-Term(TMT6plex); K7(TMT6plex) 5 E9Q2X6 Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1 Q3U763; E9Q2X6; Q8CG47; Q6P7V9; Q3UZJ7 Structural maintenance of chromosomes protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1; Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1; Structural maintenance of chromosomes protein 4 OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1; Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=2 SV=1; SMC_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Smc4 PE=2 SV=1 0 2 2 0.4105 0 1 1 1 610.35083 1219.69438 1219.69344 0.77 0.00047 0/0 0 0 6560320 HCD 30 MS2 34.88351 1086.3 110 58.7412 16815 16815 16808 QEplus033719.raw F4 1101.6 925.7 1038.3 790.1 1558.9 1102.9 447 2.29 1 FALSE 0.001038 0.0136 0.351 -250 75939 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAQATLSNTTK [R].gAQATLSNTTk.[A] N-Term(TMT6plex); K11(TMT6plex) 1 Q9JJ28 Protein flightless-1 homolog OS=Mus musculus OX=10090 GN=Flii PE=1 SV=1 Q9JJ28 Protein flightless-1 homolog OS=Mus musculus OX=10090 GN=Flii PE=1 SV=1 0 2 2 0.6193 0 1 1 1 775.45245 1549.89763 1549.89499 1.7 0.00132 0/0 0 0 3640860 HCD 30 MS2 0 353.5 110 58.7437 16816 16816 16808 QEplus033719.raw F4 353.6 310.5 375.9 286.2 409.7 385.2 482 4.15 1 FALSE 1.14E-05 1.71E-10 1.953 -250 75956 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPTQLEGAAR [K].tPTQLEGAAR.[G] N-Term(TMT6plex) 3 Q9R190 Metastasis-associated protein MTA2 OS=Mus musculus OX=10090 GN=Mta2 PE=1 SV=1 Q3TZP3; Q9R190; Q3UDZ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Mta2 PE=2 SV=1; Metastasis-associated protein MTA2 OS=Mus musculus OX=10090 GN=Mta2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Mta2 PE=2 SV=1 0 2 2 0.5377 0 1 1 1 636.8598 1272.71233 1272.71093 1.1 0.0007 0/0 0 0 15566899 HCD 30 MS2 22.06445 682.7 110 58.7488 16818 16818 16808 QEplus033719.raw F4 673.8 668.3 770.5 502.3 797.9 683.3 346 2.92 1 FALSE 1.14E-05 3.48E-06 1.135 -250 75963 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TMAVNCK [R].tMAVNck.[V] N-Term(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.3815 0 1 1 1 641.35565 1281.70403 1281.70593 -1.49 -0.00095 0/0 0 0 15954437 HCD 30 MS2 28.92157 1471.1 110 58.7561 16820 16820 16819 QEplus033719.raw F4 1658.4 969.3 1238.4 1946.9 1290.7 1723 320 2.49 2 FALSE 0.001074 0.01388 0.347 -250 75980 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSELIAK [K].rSELIAk.[I] N-Term(TMT6plex); K7(TMT6plex) 5 A2BE93; Q9EQU5-2 Protein SET (Fragment) OS=Mus musculus OX=10090 GN=Set PE=1 SV=1;Isoform 2 of Protein SET OS=Mus musculus OX=10090 GN=Set Q5U445; A2BE93; Q9EQU5-2; A2BE92; Q3T9S3 cDNA sequence BC085271 OS=Mus musculus OX=10090 GN=BC085271 PE=2 SV=1; Protein SET (Fragment) OS=Mus musculus OX=10090 GN=Set PE=1 SV=1; Isoform 2 of Protein SET OS=Mus musculus OX=10090 GN=Set; Protein SET (Fragment) OS=Mus musculus OX=10090 GN=Set PE=1 SV=1; SET translocation OS=Mus musculus OX=10090 GN=Set PE=2 SV=1 1 2 2 0.1742 0 1 1 1 637.91315 1274.81902 1274.81964 -0.49 -0.00031 0/0 0 0 16174795 HCD 30 MS2 43.79293 966.9 94.769 58.7631 16823 16823 16819 QEplus033719.raw F4 967.2 890.8 985.2 773 1170.6 1014.4 315 1.78 2 FALSE 0.001584 0.02418 0.25 -250 75989 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LCDNLR [K].lcDNLR.[M] N-Term(TMT6plex); C2(Carbamidomethyl) 6 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3UEK3; Q6A0B9; Q3TKF9; Q3UL99; Q3UM46 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; MKIAA0139 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 0 2 2 0.195 0 1 1 1 510.27908 1019.55089 1019.55053 0.35 0.00018 0/0 0 0 11926589 HCD 30 MS2 47.71951 1296.1 106.138 58.7655 16824 16824 16819 QEplus033719.raw F4 1455.5 976.9 1412.5 1097 1427.4 1407.4 223 2 1 FALSE 0.003235 0.06318 0.105 -250 75999 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQAGDPVAR [R].iQAGDPVAR.[Y] N-Term(TMT6plex) 1 Q80UW8 "DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Mus musculus OX=10090 GN=Polr2e PE=1 SV=1" Q80UW8 "DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Mus musculus OX=10090 GN=Polr2e PE=1 SV=1" 0 2 2 0.5839 0 1 1 1 578.33972 1155.67217 1155.66834 3.31 0.00191 0/0 0 0 9582244 HCD 30 MS2 9.706963 697.6 110 58.7681 16825 16825 16819 QEplus033719.raw F4 736.4 582.6 752.4 541.5 863.9 708.8 159 2.74 1 FALSE 1.14E-05 5.52E-05 0.906 -250 76021 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IECDDKGDGSCDVR [K].iEcDDkGDGScDVR.[Y] N-Term(TMT6plex); C3(Carbamidomethyl); K6(TMT6plex); C11(Carbamidomethyl) 7 B9EKP5; Q8VHX6 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1;Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3" Q3U7N9; B7FAV1; B9EKP5; Q8BTM8; Q8VHX6-2; Q8VHX6; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 1 3 3 0.6601 0 1 1 1 695.33026 2083.97623 2083.97887 -1.27 -0.00088 0/0 0 0 4419514.5 HCD 30 MS2 28.99349 274.2 110 58.7756 16828 16828 16819 QEplus033719.raw F4 277.9 232 297 222.5 314.6 301 91 3.56 2 FALSE 1.14E-05 6.29E-07 1.276 -250 76026 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLDSGSASMAK [K].rLDSGSASMAk.[Y] N-Term(TMT6plex); K11(TMT6plex) 2 P51174 "Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=2" A0A0R4J083; P51174 "Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=1; Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=2" 1 2 2 0.6207 0 1 1 1 790.9455 1580.88371 1580.88305 0.42 0.00033 0/0 0 0 4078179.75 HCD 30 MS2 0 188.5 110 58.7781 16829 16829 16819 QEplus033719.raw F4 190.7 145.7 210.4 218.8 146.5 218.7 412 2.61 1 FALSE 1.14E-05 1.86E-05 0.996 -250 76030 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLEDACAEAQR [K].sLEDAcAEAQR.[V] N-Term(TMT6plex); C6(Carbamidomethyl) 3 Q3ULS2 Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc2 PE=2 SV=1 Q3ULS2; Q8CG48; B1AWH6 Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc2 PE=2 SV=1; Structural maintenance of chromosomes protein 2 OS=Mus musculus OX=10090 GN=Smc2 PE=1 SV=2; Structural maintenance of chromosomes protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Smc2 PE=1 SV=1 0 2 2 0.6869 0 1 1 1 739.85962 1478.71196 1478.71067 0.87 0.00064 0/0 0 0 3458559 HCD 30 MS2 47.20361 240.2 110 58.7854 16831 16831 16830 QEplus033719.raw F4 234.3 230.2 257.8 201.1 276.9 241.2 103 3.13 1 FALSE 1.14E-05 1.09E-07 1.42 -250 76066 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSFATR [K].vSFATR.[R] N-Term(TMT6plex) 8 Q3UK30; Q8BQ46 "Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1;TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1" Q3UK30; G3UXT7; P56959; Q8BQ46; Q8CFQ9; Q3USY4; Q3TLE4; F6QCI0 "Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; RNA-binding protein FUS (Fragment) OS=Mus musculus OX=10090 GN=Fus PE=1 SV=1; RNA-binding protein FUS OS=Mus musculus OX=10090 GN=Fus PE=1 SV=1; TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1; Fusion, derived from t(1216) malignant liposarcoma (Human) OS=Mus musculus OX=10090 GN=Fus PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Taf15 PE=2 SV=1; TATA-box-binding protein-associated factor 15 (Fragment) OS=Mus musculus OX=10090 GN=Taf15 PE=1 SV=1" 0 2 2 0.45 0 1 1 1 455.27213 909.53697 909.53553 1.58 0.00072 0/0 0 0 16883502 HCD 30 MS2 44.59636 1148 87.544 58.797 16836 16836 16830 QEplus033719.raw F4 1109.5 1103.8 1291 887.3 1287.2 1208.9 40 2.2 2 FALSE 0.005349 0.09147 0.03 -250 76076 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQVISNAK [K].sQVISNAk.[N] N-Term(TMT6plex); K8(TMT6plex) 5 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q8C6R3; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 0 2 2 0.568 0 1 1 1 652.90009 1304.79289 1304.79382 -0.71 -0.00046 0/0 0 0 9075032 HCD 30 MS2 54.13106 1075.6 110 58.7995 16837 16837 16830 QEplus033719.raw F4 1193.6 875.6 1042.3 913.6 1328.1 1100.6 482 3.38 1 FALSE 1.14E-05 9.88E-05 0.858 -250 76090 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQEGGIVSK [K].qQEGGIVSk.[N] N-Term(TMT6plex); K9(TMT6plex) 1 Q9JK92 Heat shock protein beta-8 OS=Mus musculus OX=10090 GN=Hspb8 PE=1 SV=1 Q9JK92 Heat shock protein beta-8 OS=Mus musculus OX=10090 GN=Hspb8 PE=1 SV=1 0 3 3 0.5036 0 1 1 1 468.61533 1403.83142 1403.82585 3.97 0.00186 0/0 0 0 7451819.5 HCD 30 MS2 65.21735 846.3 110 58.8045 16839 16839 16830 QEplus033719.raw F4 934.6 647.3 894.3 747.1 842.9 1011.7 493 2.8 1 FALSE 5.44E-05 0.00221 0.589 -250 76097 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVVPQGGPHSLR [R].sVVPQGGPHSLR.[C] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.5877 0 1 1 1 731.91949 1462.83171 1462.83278 -0.73 -0.00053 0/0 0 0 4837210 HCD 30 MS2 0 239.7 110 58.807 16840 16840 16830 QEplus033719.raw F4 224.9 215.5 282.7 228.6 233.3 253.2 495 3.42 2 FALSE 1.14E-05 5.36E-05 0.909 -250 76106 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RIAQAVEK [K].rIAQAVEk.[K] N-Term(TMT6plex); K8(TMT6plex) 2 P21550 Beta-enolase OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=3 J3QPZ9; P21550 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=1; Beta-enolase OS=Mus musculus OX=10090 GN=Eno3 PE=1 SV=3 1 3 3 0.3756 0 1 1 1 458.29428 1372.86829 1372.86765 0.46 0.00021 0/0 0 0 221314656 HCD 30 MS2 10.5175 729.4 6.839 58.8191 16844 16844 16841 QEplus033719.raw F4 924.7 359.8 656.6 965.5 509.9 960.2 362 3.94 1 FALSE 1.14E-05 3.67E-05 0.94 -250 76113 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLEAQADK [K].sLEAQADk.[Y] N-Term(TMT6plex); K8(TMT6plex) 3 P58774 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1 Q9D1R6; P58774; Q61344 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1 0 3 3 0.3721 0 1 1 1 440.59064 1319.75736 1319.7571 0.19 0.00009 0/0 0 0 125755256 HCD 30 MS2 7.618026 595.9 8.997 58.8214 16845 16845 16841 QEplus033719.raw F4 866.8 253.9 628.6 648.8 330.9 846.5 522 3.01 1 FALSE 0.0001603 0.003583 0.539 -250 76123 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TITVVQR [R].tITVVQR.[Q] N-Term(TMT6plex) 1 Q8BHS3 Pre-mRNA-splicing factor RBM22 OS=Mus musculus OX=10090 GN=Rbm22 PE=1 SV=1 Q8BHS3 Pre-mRNA-splicing factor RBM22 OS=Mus musculus OX=10090 GN=Rbm22 PE=1 SV=1 0 2 2 0.3364 0 1 1 1 523.33173 1045.65618 1045.65671 -0.51 -0.00027 0/0 0 0 6714787.5 HCD 30 MS2 37.46819 1173.1 110 58.8239 16846 16846 16841 QEplus033719.raw F4 1276.3 892.6 1166 1194.3 1216.9 1292.7 87 2.2 1 FALSE 0.001955 0.03382 0.199 -250 76142 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVQGQLK [R].sVQGQLk.[D] N-Term(TMT6plex); K7(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 0 2 2 0.2619 0 1 1 1 609.38495 1217.76262 1217.76179 0.68 0.00041 0/0 0 0 11814370 HCD 30 MS2 36.7375 1414.5 110 58.8286 16848 16848 16841 QEplus033719.raw F4 1970.5 411.2 1114.5 2405.4 519.4 2066.1 427 2.52 1 FALSE 0.0002719 0.00549 0.49 -250 76150 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGNRGEPGPAGSVGPVGAVGPR [K].hGNRGEPGPAGSVGPVGAVGPR.[G] N-Term(TMT6plex) 5 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q91VL4; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Col1a2 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 1 4 4 0.7755 0 1 1 1 564.30438 2254.1957 2254.20023 -2.01 -0.00113 0/0 0 0 6129776.5 HCD 30 MS2 0 327.8 110 58.8311 16849 16849 16841 QEplus033719.raw F4 357.8 270.3 352.7 233.7 381.4 370.7 361 7.17 1 FALSE 1.14E-05 6.31E-16 3.042 -250 76154 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEVGDNWR [K].tEVGDNWR.[L] N-Term(TMT6plex) 2 Q5BKS5 Hook homolog 3 (Drosophila) OS=Mus musculus OX=10090 GN=Hook3 PE=2 SV=1 Q5BKS5; Q8BUK6 Hook homolog 3 (Drosophila) OS=Mus musculus OX=10090 GN=Hook3 PE=2 SV=1; Protein Hook homolog 3 OS=Mus musculus OX=10090 GN=Hook3 PE=1 SV=2 0 2 2 0.234 0 1 1 1 603.30933 1205.61138 1205.61122 0.13 0.00008 0/0 0 0 5764038 HCD 30 MS2 49.5619 775.6 110 58.8337 16850 16850 16841 QEplus033719.raw F4 799 568.2 796.2 699.1 923.2 867.8 149 2.35 1 FALSE 0.0003408 0.00642 0.47 -250 76160 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEEENLNK [R].eAEEENLNk.[S] N-Term(TMT6plex); K9(TMT6plex) 15 Q3TJ07 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1 Q3TJ07; V9GX87; Q641P2; A2A5R8; Q9Z108; Q3TWA1; Q3U7A6; Q3UKX3; Q6TNG5; Q3U8D3; Q3UTC8; A2A5S3; Q3TWP5; Q3TU43; Q9DBE7 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus OX=10090 GN=Stau1 PE=1 SV=1; Stau1 protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus OX=10090 GN=Stau1 PE=1 SV=1; Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus OX=10090 GN=Stau1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Staufen OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus OX=10090 GN=Stau1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus OX=10090 GN=Stau1 PE=1 SV=1 0 2 2 0.6523 0 1 1 1 767.41205 1533.81682 1533.81607 0.49 0.00037 0/0 0 0 5741278 HCD 30 MS2 0 304.6 110 58.8362 16851 16851 16841 QEplus033719.raw F4 305.2 268.8 319.7 219.9 387.5 326.8 279 3.71 1 FALSE 1.14E-05 1.22E-06 1.221 -250 76165 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NGDRGETGPAGPAGPIGPAGAR [K].nGDRGETGPAGPAGPIGPAGAR.[G] N-Term(TMT6plex) 3 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087; Q99LL6 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4; Col1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1 1 2 2 0.8482 0 1 1 1 1102.57703 2204.14678 2204.13696 4.45 0.00491 0/0 0 0 2098286.5 HCD 30 MS2 0 14.8 110 58.8435 16853 16853 16852 QEplus033719.raw F4 19.9 12.1 17.9 10.8 16.5 11.5 351 4.48 1 FALSE 1.14E-05 1.62E-13 2.527 -250 76171 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TKYETDAIQR [R].tkYETDAIQR.[T] N-Term(TMT6plex); K2(TMT6plex) 13 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; B2RWX0; B2RQQ1; I6L963; B1AR69; B2RY26; B2RXX9; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 2 2 0.6115 0 1 1 1 841.97925 1682.95122 1682.94776 2.06 0.00173 0/0 0 0 4352189 HCD 30 MS2 0 237.8 110 58.8461 16854 16854 16852 QEplus033719.raw F4 255.6 71.3 186.2 515.6 73 325 357 2.6 5 FALSE 1.14E-05 0.0001011 0.856 -250 76180 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPELEDSTLR [R].rPELEDSTLR.[Y] N-Term(TMT6plex) 31 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q499F9; Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q05CR3; Q9QXS1-9; E9Q9J6; Q9QXS1-5; E9PW24; A0A0R4J221; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; A0A0R4J223; Q8C8S5; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.6292 0 1 1 1 482.27045 1444.79679 1444.79572 0.74 0.00035 0/0 0 0 66514940 HCD 30 MS2 13.84241 487.6 19.351 58.8483 16855 16855 16852 QEplus033719.raw F4 511.1 348.4 501.4 475.4 475.9 613.2 349 4.45 2 FALSE 1.14E-05 1.44E-07 1.397 -250 76195 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQVISNAK [K].sQVISNAk.[N] N-Term(TMT6plex); K8(TMT6plex) 5 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q8C6R3; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 0 3 3 0.4575 0 1 1 1 435.59961 1304.78427 1304.79382 -7.32 -0.00318 0/0 0 0 21592350 HCD 30 MS2 31.86791 1038.1 36.063 58.8529 16857 16857 16852 QEplus033719.raw F4 1365.5 607.7 927.8 874.7 1326 1127.2 528 2.47 1 FALSE 0.001584 0.0241 0.25 -250 76215 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIEDAEK [K].eIEDAEk.[Y] N-Term(TMT6plex); K7(TMT6plex) 1 Q80SW1 S-adenosylhomocysteine hydrolase-like protein 1 OS=Mus musculus OX=10090 GN=Ahcyl1 PE=1 SV=1 Q80SW1 S-adenosylhomocysteine hydrolase-like protein 1 OS=Mus musculus OX=10090 GN=Ahcyl1 PE=1 SV=1 0 2 2 0.2645 0 1 1 1 646.36023 1291.71318 1291.71457 -1.07 -0.00069 0/0 0 0 27977702 HCD 30 MS2 8.9905 1082.4 78.509 58.8576 16859 16859 16852 QEplus033719.raw F4 1104.1 985.8 1090.3 861.3 1441.2 1011.5 376 2.42 1 FALSE 0.001057 0.01365 0.35 -250 76235 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEISTDPK [K].sEISTDPk.[L] N-Term(TMT6plex); K8(TMT6plex) 3 Q8BTI8 Serine/arginine repetitive matrix protein 2 OS=Mus musculus OX=10090 GN=Srrm2 PE=1 SV=3 Q8BTI8; Q8BTI8-2; Q8BTI8-3 Serine/arginine repetitive matrix protein 2 OS=Mus musculus OX=10090 GN=Srrm2 PE=1 SV=3; Isoform 2 of Serine/arginine repetitive matrix protein 2 OS=Mus musculus OX=10090 GN=Srrm2; Isoform 3 of Serine/arginine repetitive matrix protein 2 OS=Mus musculus OX=10090 GN=Srrm2 0 2 2 0.3028 0 1 1 1 667.8819 1334.75652 1334.75677 -0.19 -0.00012 0/0 0 0 8545473 HCD 30 MS2 18.87236 649.1 110 58.8651 16862 16862 16852 QEplus033719.raw F4 625.5 571 712.2 527.1 764.1 694.7 462 2.18 1 FALSE 0.006938 0.1099 -0.019 -250 76243 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVATTQGEQEAAETCR [R].aAVATTQGEQEAAETcR.[F] N-Term(TMT6plex); C16(Carbamidomethyl) 4 J3QK52 Nucleolar complex protein 2 homolog OS=Mus musculus OX=10090 GN=Noc2l PE=1 SV=1 J3QK52; Q9WV70; Q8BHX6; Q3UZI6 Nucleolar complex protein 2 homolog OS=Mus musculus OX=10090 GN=Noc2l PE=1 SV=1; Nucleolar complex protein 2 homolog OS=Mus musculus OX=10090 GN=Noc2l PE=1 SV=2; Nucleolar complex protein 2 homolog OS=Mus musculus OX=10090 GN=Noc2l PE=1 SV=1; Nucleolar complex protein 2 homolog (Fragment) OS=Mus musculus OX=10090 GN=Noc2l PE=2 SV=1 0 3 3 0.8066 0 1 1 1 674.6629 2021.97416 2021.97595 -0.89 -0.0006 0/0 0 0 3295526.75 HCD 30 MS2 0 292.6 110 58.875 16865 16865 16863 QEplus033719.raw F4 256.4 254.5 333.4 272.4 253.6 385.1 126 5.12 1 FALSE 1.14E-05 1.08E-11 2.181 -250 76249 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NGDRGETGPAGPAGPIGPAGAR [K].nGDRGETGPAGPAGPIGPAGAR.[G] N-Term(TMT6plex) 3 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087; Q99LL6 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4; Col1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1 1 3 3 0.8248 0 1 1 1 735.38373 2204.13663 2204.13696 -0.15 -0.00011 0/0 0 0 37739028 HCD 30 MS2 0 234.9 48.735 58.8772 16866 16866 16863 QEplus033719.raw F4 222.4 191.9 258.3 217.4 261 258.4 309 7.65 1 FALSE 1.14E-05 6.31E-16 5.02 -250 76259 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTGAAGSFK [K].gTGAAGSFk.[L] N-Term(TMT6plex); K9(TMT6plex) 1 P43275 Histone H1.1 OS=Mus musculus OX=10090 GN=H1-1 PE=1 SV=2 P43275 Histone H1.1 OS=Mus musculus OX=10090 GN=H1-1 PE=1 SV=2 0 2 2 0.6269 0 1 1 1 627.36682 1253.72637 1253.72541 0.76 0.00048 0/0 0 0 24427502 HCD 30 MS2 9.661244 1386 72.333 58.8818 16868 16868 16863 QEplus033719.raw F4 1320.9 1683.5 1401.3 657.9 2299.2 953.1 346 3.27 1 FALSE 1.14E-05 3.17E-06 1.142 -250 76265 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMGYAAK [K].nMGYAAk.[A] N-Term(TMT6plex); K7(TMT6plex) 1 Q9D8B3 Charged multivesicular body protein 4b OS=Mus musculus OX=10090 GN=Chmp4b PE=1 SV=2 Q9D8B3 Charged multivesicular body protein 4b OS=Mus musculus OX=10090 GN=Chmp4b PE=1 SV=2 0 2 2 0.2708 0 1 1 1 606.84656 1212.68584 1212.6811 3.91 0.00237 0/0 0 0 8425126 HCD 30 MS2 0 1060.5 110 58.8843 16869 16869 16863 QEplus033719.raw F4 1177.1 908.3 1062.9 914.8 1194 1106 190 2.88 1 FALSE 0.0003996 0.007158 0.455 -250 76275 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTPQELEQTR [K].dTPQELEQTR.[S] N-Term(TMT6plex) 2 Q571A2 MKIAA4106 protein (Fragment) OS=Mus musculus OX=10090 GN=Cul2 PE=2 SV=1 Q571A2; Q9D4H8 MKIAA4106 protein (Fragment) OS=Mus musculus OX=10090 GN=Cul2 PE=2 SV=1; Cullin-2 OS=Mus musculus OX=10090 GN=Cul2 PE=1 SV=2 0 2 2 0.5806 0 1 1 1 723.37518 1445.74309 1445.74335 -0.18 -0.00013 0/0 0 0 7268236 HCD 30 MS2 62.03766 392.8 110 58.8868 16870 16870 16863 QEplus033719.raw F4 390.5 300.6 416.5 397.4 395.2 456.6 217 3.41 1 FALSE 1.14E-05 3.37E-05 0.947 -250 76281 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELKEENEEK [R].eLkEENEEk.[T] N-Term(TMT6plex); K3(TMT6plex); K9(TMT6plex) 5 P70336 Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1 Q6A035; P70336; A0A1Y7VMN0; P70336-2; F8VPK5 Non-specific serine/threonine protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Rock2 PE=2 SV=1; Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1; Rho-associated protein kinase 2 (Fragment) OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1; Isoform 2 of Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2; Rho-associated protein kinase OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1 1 3 3 0.3816 0 1 1 1 612.35126 1835.03922 1835.03652 1.47 0.0009 0/0 0 0 4962151.5 HCD 30 MS2 10.62347 738.4 110 58.8893 16871 16871 16863 QEplus033719.raw F4 745.1 662.6 722.4 577 1019.4 703.7 470 2.28 1 FALSE 1.14E-05 0.0001876 0.805 -250 76285 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVEEPPQK [K].aVEEPPQk.[E] N-Term(TMT6plex); K8(TMT6plex) 2 Q8BGC0 HIV Tat-specific factor 1 homolog OS=Mus musculus OX=10090 GN=Htatsf1 PE=1 SV=1 Q8BGC0-2; Q8BGC0 Isoform 2 of HIV Tat-specific factor 1 homolog OS=Mus musculus OX=10090 GN=Htatsf1; HIV Tat-specific factor 1 homolog OS=Mus musculus OX=10090 GN=Htatsf1 PE=1 SV=1 0 2 2 0.6152 0 1 1 1 678.40204 1355.7968 1355.79349 2.44 0.00166 0/0 0 0 3327962.75 HCD 30 MS2 0 327.7 110 58.8918 16872 16872 16863 QEplus033719.raw F4 328 285 326.7 295.9 371.7 358.8 331 3.3 1 FALSE 1.14E-05 0.0006866 0.695 -250 76294 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TELADK [R].tELADk.[VM] N-Term(TMT6plex); K6(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; O89055; Q9CQG8; Q8VDD5; Q5S006 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Nonmuscle myosin heavy chain-A (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Lrrk2 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Leucine-rich repeat serine/threonine-protein kinase 2 OS=Mus musculus OX=10090 GN=Lrrk2 PE=1 SV=2 0 2 2 0.156 0 1 1 1 567.84229 1134.67729 1134.67706 0.21 0.00012 0/0 0 0 23036218 HCD 30 MS2 37.45296 1849.8 110 58.8943 16873 16873 16863 QEplus033719.raw F4 2375.7 1569.3 1997.2 1574.5 2013.7 1568.7 306 2.18 1 FALSE 0.002509 0.04941 0.144 -250 76308 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGPYSEPSK [K].eGPYSEPSk.[R] N-Term(TMT6plex); K9(TMT6plex) 10 Q8C9L6; A2API8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1;Paralemmin A kinase anchor protein OS=Mus musculus OX=10090 GN=Pakap PE=1 SV=1 Q69ZV5; O54931-3; O54931-4; Q8C9L6; A2API8; O54931-2; Q99L95; O54931-5; O54931; F7AA26 MKIAA0920 protein (Fragment) OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1; Isoform 3 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; Isoform 4 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1; Paralemmin A kinase anchor protein OS=Mus musculus OX=10090 GN=Pakap PE=1 SV=1; Isoform 2 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; Akap2 protein OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1; Isoform 5 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2 PE=1 SV=3; Paralemmin A kinase anchor protein (Fragment) OS=Mus musculus OX=10090 GN=Pakap PE=1 SV=1 0 2 2 0.556 0 1 1 1 726.39349 1451.77971 1451.77823 1.02 0.00074 0/0 0 0 6857409.5 HCD 30 MS2 15.74232 492 110 58.9042 16876 16876 16874 QEplus033719.raw F4 492.9 462.1 530.9 413 581.5 471.3 356 2.68 2 FALSE 1.14E-05 9.48E-06 1.052 -250 76313 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIPHLVTHDAR [K].gIPHLVTHDAR.[T] N-Term(TMT6plex) 5 P62702 "40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2" V9GWY0; Q545F8; P62702; Q3V1Z5; Q3UXQ6 "40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Gm15013 PE=3 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1; 40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4l PE=2 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1" 0 4 4 0.7619 0 1 1 1 361.961 1444.82216 1444.82221 -0.03 -0.00001 0/0 0 0 25936800 HCD 30 MS2 10.44447 226.9 39.206 58.9064 16877 16877 16874 QEplus033719.raw F4 221.1 184.6 274 183.7 227.9 270.4 393 4.41 1 FALSE 1.14E-05 3.03E-08 1.526 -250 76337 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDEMNVK [K].sDEMNVk.[V] N-Term(TMT6plex); K7(TMT6plex) 6 A0A1W2P6F6 Myosin light polypeptide 6 OS=Mus musculus OX=10090 GN=Myl6 PE=1 SV=1 Q3TIG9; A0A1W2P6G5; A0A1W2P6F6; A0A1W2P7Q9; Q60605; Q60605-2 EF-hand domain-containing protein OS=Mus musculus OX=10090 GN=Myl6 PE=2 SV=1; Myosin light polypeptide 6 OS=Mus musculus OX=10090 GN=Myl6 PE=1 SV=1; Myosin light polypeptide 6 OS=Mus musculus OX=10090 GN=Myl6 PE=1 SV=1; Myosin light polypeptide 6 OS=Mus musculus OX=10090 GN=Myl6 PE=1 SV=1; Myosin light polypeptide 6 OS=Mus musculus OX=10090 GN=Myl6 PE=1 SV=3; Isoform Smooth muscle of Myosin light polypeptide 6 OS=Mus musculus OX=10090 GN=Myl6 0 3 3 0.3433 0 1 1 1 427.56833 1280.69043 1280.69206 -1.27 -0.00054 0/0 0 0 30740568 HCD 30 MS2 13.05141 566 39.385 58.9132 16880 16880 16874 QEplus033719.raw F4 630.9 568.5 590.3 374.3 729.8 502.3 264 2.33 1 FALSE 0.002474 0.04893 0.145 -250 76345 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGRDYVQK [K].vGRDYVQk.[A] N-Term(TMT6plex); K8(TMT6plex) 13 Q5SV64; Q8VDD5 Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q6URW6-2; Q80T68; Q8BLI3; Q8BWI3; Q5SV64; Q3UH59; Q8VDD5; A0A140LI60; Q6URW6; Q8BLI1; K3W4R2; Q6URW6-3; Q61879 Isoform 2 of Myosin-14 OS=Mus musculus OX=10090 GN=Myh14; MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-14 (Fragment) OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Myosin-14 OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-14 OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Isoform 3 of Myosin-14 OS=Mus musculus OX=10090 GN=Myh14; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 1 3 3 0.4317 0 1 1 1 474.95432 1422.84839 1422.84692 1.04 0.00049 0/0 0 0 12571694 HCD 30 MS2 28.71316 1217.4 110 58.9157 16881 16881 16874 QEplus033719.raw F4 1289.8 1222.7 1312.6 770.8 1679.9 1028.5 429 2.71 2 FALSE 5.44E-05 0.001825 0.607 -250 76377 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEDGPK [K].kLEDGPk.[F] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 5 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 P10126; Q3UZQ3; Q4FZE5; Q3UA81; Q3TII3 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Eef1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1 1 3 3 0.4792 0 1 1 1 491.97995 1473.9253 1473.92439 0.61 0.0003 0/0 0 0 327936096 HCD 30 MS2 7.040292 931.5 4.179 58.9305 16886 16886 16885 QEplus033719.raw F4 1099.5 525.7 1042.3 1023.3 987.9 910.1 306 2.65 1 FALSE 1.14E-05 0.0004159 0.738 -250 76387 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPPINTK [K].nPPINTk.[S] N-Term(TMT6plex); K7(TMT6plex) 5 Q9CPW4 Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=1 SV=3 Q3TK56; Q3UA72; Q9CPW4; Q3UC32; Q3TKM9 Actin-related protein 2/3 complex subunit 5 (Fragment) OS=Mus musculus OX=10090 GN=Arpc5 PE=2 SV=1; Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=1 SV=1; Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=1 SV=3; Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=2 SV=1; Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=2 SV=1 0 2 2 0.4636 0 1 1 1 621.38446 1241.76164 1241.76179 -0.12 -0.00007 0/0 0 0 5356715 HCD 30 MS2 29.60107 706.4 110 58.933 16887 16887 16885 QEplus033719.raw F4 697.3 575.5 707.6 549.4 943.4 765.4 259 2.2 1 FALSE 0.003134 0.06088 0.112 -250 76394 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAELGAK [R].eAELGAk.[A] N-Term(TMT6plex); K7(TMT6plex) 6 Q99LF8 Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1 Q99LF8; Q91YZ8; A3KFU5; Q3UX16; A3KFU8; Q6PHQ9 Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc4 PE=1 SV=1 0 2 2 0.1115 0 1 1 1 588.3559 1175.70452 1175.70361 0.77 0.00045 0/0 0 0 23984532 HCD 30 MS2 10.83583 1268.2 69.866 58.9375 16889 16889 16885 QEplus033719.raw F4 1458.9 981.8 1360 1115.4 1467.9 1225.1 516 2.6 1 FALSE 0.0003996 0.007102 0.456 -250 76408 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENEPLSTK [K].eNEPLSTk.[T] N-Term(TMT6plex); K8(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.2264 0 1 1 1 688.39587 1375.78447 1375.78332 0.84 0.00058 0/0 0 0 11737545 HCD 30 MS2 55.38853 964.6 110 58.9425 16891 16891 16885 QEplus033719.raw F4 1121.5 373.9 801.2 1518.7 518.9 1453.6 488 2.65 2 FALSE 0.002233 0.04321 0.163 -250 76413 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FEMGHVR [K].fEMGHVR.[A] N-Term(TMT6plex) 3 Q3UE11 Procollagen-lysine 5-dioxygenase OS=Mus musculus OX=10090 PE=2 SV=1 Q3UE11; Q3TZN4; Q9R0E2 "Procollagen-lysine 5-dioxygenase OS=Mus musculus OX=10090 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Plod1 PE=2 SV=1; Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Mus musculus OX=10090 GN=Plod1 PE=1 SV=1" 0 3 3 0.6914 0 1 1 1 368.86569 1104.58252 1104.58217 0.32 0.00012 0/0 0 0 8126905 HCD 30 MS2 23.37398 499 95.256 58.9472 16893 16893 16885 QEplus033719.raw F4 486.9 362.8 516.1 514.4 513.8 600.2 214 3.37 1 FALSE 0.0002518 0.00523 0.496 -250 76419 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AALTQAK [K].aALTQAk.[S] N-Term(TMT6plex); K7(TMT6plex) 2 Q8JZX4 Splicing factor 45 OS=Mus musculus OX=10090 GN=Rbm17 PE=1 SV=1 A2AP40; Q8JZX4 Splicing factor 45 (Fragment) OS=Mus musculus OX=10090 GN=Rbm17 PE=1 SV=1; Splicing factor 45 OS=Mus musculus OX=10090 GN=Rbm17 PE=1 SV=1 0 2 2 0.0795 0 1 1 1 580.87402 1160.74077 1160.74033 0.38 0.00022 0/0 0 0 6357262.5 HCD 30 MS2 37.32727 942.1 110 58.9497 16894 16894 16885 QEplus033719.raw F4 1105.8 763.2 974.3 846.2 1084.1 879.2 203 2.39 1 FALSE 0.0003496 0.006812 0.462 -250 76437 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVDPQGLR [K].eVDPQGLR.[T] N-Term(TMT6plex) 13 Q3TCR7; P39054 Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1;Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2 Q3TCR7; P39054; E9QLL2; P39054-2; G3X9G4; F8WIV5; Q3T9X3; Q8BZ98; Q9CUM4; Q8BZ98-2; Q8BUT2; Q3TBU6; G3UZZ3 Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm3 PE=1 SV=1; Isoform 2 of Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Mus musculus OX=10090 GN=Dnm3 PE=1 SV=1; Dynamin GTPase (Fragment) OS=Mus musculus OX=10090 GN=Dnm2 PE=2 SV=1; Isoform 2 of Dynamin-3 OS=Mus musculus OX=10090 GN=Dnm3; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm3 PE=2 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=2 SV=1; Dynamin GTPase (Fragment) OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1 0 2 2 0.4266 0 1 1 1 571.82196 1142.63664 1142.6367 -0.05 -0.00003 0/0 0 0 17383048 HCD 30 MS2 45.17668 1269.9 87.241 58.9595 16897 16897 16896 QEplus033719.raw F4 1345.1 1088.6 1327.1 1123.6 1446.7 1288.2 154 2.86 2 FALSE 0.0005174 0.008145 0.436 -250 76442 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMEAELEDERK [R].emEAELEDERk.[Q] N-Term(TMT6plex); M2(Oxidation); K11(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q7TQJ6; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 3 3 0.6452 0 1 1 1 618.31683 1852.93595 1852.93626 -0.17 -0.00011 0/0 0 0 8297560 HCD 30 MS2 0 459.9 110 58.9621 16898 16898 16896 QEplus033719.raw F4 450.8 388 530.4 352.2 534.8 502.9 222 2.48 1 FALSE 3.35E-05 0.001134 0.651 -250 76446 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIDTAAK [R].dIDTAAk.[F] N-Term(TMT6plex); K7(TMT6plex) 4 Q9CR84 "ATP synthase F(0) complex subunit C1, mitochondrial OS=Mus musculus OX=10090 GN=Atp5mc1 PE=1 SV=1" Q9CR84; P56383; P56384; A0A087WQS5 "ATP synthase F(0) complex subunit C1, mitochondrial OS=Mus musculus OX=10090 GN=Atp5mc1 PE=1 SV=1; ATP synthase F(0) complex subunit C2, mitochondrial OS=Mus musculus OX=10090 GN=Atp5mc2 PE=1 SV=2; ATP synthase F(0) complex subunit C3, mitochondrial OS=Mus musculus OX=10090 GN=Atp5mc3 PE=1 SV=1; ATP synthase, H+-transporting, mitochondrial F0 complex, subunit C2 (subunit 9) (Fragment) OS=Mus musculus OX=10090 GN=Atp5g2 PE=3 SV=1" 0 3 3 0.4346 0 1 1 1 397.90482 1191.69989 1191.69852 1.15 0.00046 0/0 0 0 19130044 HCD 30 MS2 27.13976 733.5 50.709 58.9665 16900 16900 16896 QEplus033719.raw F4 537.9 667 1031 515.4 533.8 1116 466 2.14 1 FALSE 0.002071 0.03823 0.181 -250 76459 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVVPQGGPHSLR [R].sVVPQGGPHSLR.[C] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.2601 0 1 1 1 731.92438 1462.84148 1462.83278 5.95 0.00435 0/0 0 0 5758778 HCD 30 MS2 0 281.3 110 58.9716 16902 16902 16896 QEplus033719.raw F4 275.1 260.8 304.5 239.5 307.3 300.7 444 2.73 2 FALSE 0.001231 0.01656 0.315 -250 76484 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLDTGEEVTR [R].dLDTGEEVTR.[D] N-Term(TMT6plex) 1 Q3UDE2 Tubulin--tyrosine ligase-like protein 12 OS=Mus musculus OX=10090 GN=Ttll12 PE=1 SV=1 Q3UDE2 Tubulin--tyrosine ligase-like protein 12 OS=Mus musculus OX=10090 GN=Ttll12 PE=1 SV=1 0 2 2 0.6243 0 1 1 1 682.3493 1363.69133 1363.69025 0.79 0.00054 0/0 0 0 5236892 HCD 30 MS2 0 368.6 110 58.9814 16906 16906 16896 QEplus033719.raw F4 365.6 318 391.9 318.4 404.8 412.8 159 3.62 1 FALSE 1.14E-05 0.0001482 0.824 -250 76489 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VALSEPQPERR [R].vALSEPQPERR.[F] N-Term(TMT6plex) 4 Q99MR6 Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1 Q99MR6-3; Q99MR6; Q99MR6-4; Q99MR6-2 Isoform C of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1; Isoform D of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Isoform B of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt 1 2 2 0.4066 0 1 1 1 755.93109 1510.85491 1510.85391 0.66 0.0005 0/0 0 0 3874354 HCD 30 MS2 49.64965 283.9 110 58.9888 16908 16908 16907 QEplus033719.raw F4 283 240.6 310 216.7 358.9 294 380 1.82 1 FALSE 0.001185 0.0161 0.32 -250 76505 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTGAAGSFK [K].gTGAAGSFk.[L] N-Term(TMT6plex); K9(TMT6plex) 1 P43275 Histone H1.1 OS=Mus musculus OX=10090 GN=H1-1 PE=1 SV=2 P43275 Histone H1.1 OS=Mus musculus OX=10090 GN=H1-1 PE=1 SV=2 0 3 3 0.6753 0 1 1 1 418.58099 1253.72843 1253.72541 2.41 0.00101 0/0 0 0 37373700 HCD 30 MS2 18.38045 428.2 30.265 58.9935 16910 16910 16907 QEplus033719.raw F4 386 496.2 452.1 220.1 673.4 341.1 312 2.71 1 FALSE 0.000262 0.005256 0.495 -250 76519 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NATTPLK [K].nATTPLk.[Q] N-Term(TMT6plex); K7(TMT6plex) 4 Q8CH69 Survival of motor neuron protein (Fragment) OS=Mus musculus OX=10090 GN=Smn PE=4 SV=1 Q8CH69; Q3UMN7; Q9JIC8; Q549F9 Survival of motor neuron protein (Fragment) OS=Mus musculus OX=10090 GN=Smn PE=4 SV=1; Tudor domain-containing protein OS=Mus musculus OX=10090 GN=Smn1 PE=2 SV=1; Smn protein (Fragment) OS=Mus musculus OX=10090 GN=Smn PE=4 SV=1; Survival of motor neuron protein OS=Mus musculus OX=10090 GN=Smn1 PE=1 SV=1 0 2 2 0.211 0 1 1 1 601.87988 1202.75249 1202.75089 1.33 0.0008 0/0 0 0 6913418.5 HCD 30 MS2 13.04991 907.1 110 59.0008 16913 16913 16907 QEplus033719.raw F4 974.4 824.5 973.8 738 1043.6 888.4 499 2.37 1 FALSE 0.001506 0.02236 0.262 -250 76536 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNIGQGSHPQK [R].vNIGQGSHPQk.[V] N-Term(TMT6plex); K11(TMT6plex) 1 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 0 3 3 0.746 0 1 1 1 541.65167 1622.94046 1622.93786 1.6 0.00087 0/0 0 0 7919067 HCD 30 MS2 0 825.4 110 59.0058 16915 16915 16907 QEplus033719.raw F4 931.9 783.2 830.2 643 1046.7 717.4 444 5 1 FALSE 1.14E-05 4.53E-11 2.062 -250 76562 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YRPGTVALR [R].yRPGTVALR.[E] N-Term(TMT6plex) 11 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; E0CZ27; E0CYR7; P68433; F8WI35; B9EI85; E0CYN1; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; H3.3 histone A (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; H3.3 histone A (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 0 3 3 0.5859 0 1 1 1 421.25818 1261.75998 1261.75782 1.71 0.00072 0/0 0 0 2917917184 HCD 30 MS2 2.335338 251.4 0.372 59.0181 16919 16919 16918 QEplus033719.raw F4 203 308.2 292.4 153.6 360.5 190.7 563 3.96 2 FALSE 0.0002019 0.004143 0.523 -250 76570 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTNVDESK [K].vTNVDESk.[Q] N-Term(TMT6plex); K8(TMT6plex) 1 Q6NS46 Protein RRP5 homolog OS=Mus musculus OX=10090 GN=Pdcd11 PE=1 SV=2 Q6NS46 Protein RRP5 homolog OS=Mus musculus OX=10090 GN=Pdcd11 PE=1 SV=2 0 2 2 0.3746 0 1 1 1 675.38861 1349.76995 1349.76767 1.69 0.00114 0/0 0 0 4503688.5 HCD 30 MS2 28.12057 573.7 110 59.0206 16920 16920 16918 QEplus033719.raw F4 582.6 481.4 588.1 509.4 675.5 605.4 479 3.15 1 FALSE 1.14E-05 4.07E-05 0.931 -250 76582 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDIDIR [K].cDIDIR.[K] N-Term(TMT6plex); C1(Carbamidomethyl) 12 Q3UIJ3; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q3TG92; P63268; Q3UIJ3; Q9CXK3; Q61275; Q3U122; Q61272; P62737; P68134; P68033; Q61852; Q61264 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1" 0 2 2 0.1659 0 1 1 1 510.77054 1020.5338 1020.53455 -0.73 -0.00037 0/0 0 0 12958439 HCD 30 MS2 36.32202 1453.5 110 59.0254 16922 16922 16918 QEplus033719.raw F4 1764.5 776.6 1501.4 1584.8 1288.4 1805.1 196 2.29 3 FALSE 0.002064 0.03771 0.183 -250 76587 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVQLLGR [R].hVQLLGR.[S] N-Term(TMT6plex) 7 Q7TMB8 Cytoplasmic FMR1-interacting protein 1 OS=Mus musculus OX=10090 GN=Cyfip1 PE=1 SV=1 Q7TMB8-2; A0A0R4J119; Q7TMB8; A0A0U1RQ05; Q5SQX6; F6QD74; Q6PGK0 Isoform 2 of Cytoplasmic FMR1-interacting protein 1 OS=Mus musculus OX=10090 GN=Cyfip1; Cytoplasmic FMR1-interacting protein OS=Mus musculus OX=10090 GN=Cyfip1 PE=1 SV=1; Cytoplasmic FMR1-interacting protein 1 OS=Mus musculus OX=10090 GN=Cyfip1 PE=1 SV=1; Cytoplasmic FMR1-interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Cyfip1 PE=1 SV=1; Cytoplasmic FMR1-interacting protein 2 OS=Mus musculus OX=10090 GN=Cyfip2 PE=1 SV=2; Cytoplasmic FMR1-interacting protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Cyfip2 PE=1 SV=1; Cyfip2 protein OS=Mus musculus OX=10090 GN=Cyfip2 PE=2 SV=1 0 3 3 0.1635 0 1 1 1 351.22388 1051.65708 1051.65738 -0.29 -0.0001 0/0 0 0 6174304.5 HCD 30 MS2 61.76019 283.3 110 59.0279 16923 16923 16918 QEplus033719.raw F4 274.3 245.9 319.3 253.6 266.9 340 31 3.18 1 FALSE 0.0001603 0.003806 0.533 -250 76607 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLEAQADK [K].sLEAQADk.[Y] N-Term(TMT6plex); K8(TMT6plex) 3 P58774 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1 Q9D1R6; P58774; Q61344 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1 0 2 2 0.4537 0 1 1 1 660.38214 1319.75701 1319.7571 -0.07 -0.00005 0/0 0 0 282832864 HCD 30 MS2 5.419901 1669.7 110 59.0326 16925 16925 16918 QEplus033719.raw F4 1650.9 597.6 1731.6 2088.6 1046.9 2902.5 519 3.24 1 FALSE 1.14E-05 0.0002837 0.77 -250 76623 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIPHLVTHDAR [K].gIPHLVTHDAR.[T] N-Term(TMT6plex) 5 P62702 "40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2" V9GWY0; Q545F8; P62702; Q3V1Z5; Q3UXQ6 "40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Gm15013 PE=3 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1; 40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4l PE=2 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1" 0 3 3 0.7332 0 1 1 1 482.27887 1444.82206 1444.82221 -0.11 -0.00005 0/0 0 0 12854242 HCD 30 MS2 62.87996 592 77.803 59.0372 16927 16927 16918 QEplus033719.raw F4 633.6 427.7 627.6 574.3 573.4 715.3 389 4.61 1 FALSE 1.14E-05 4.37E-09 1.685 -250 76655 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARPSPSVIK [K].aRPSPSVIk.[K] N-Term(TMT6plex); K9(TMT6plex) 5 Q3TEA8 Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1 Q3TEA8; Q3TEA8-3; Z4YKB8; Q3TEA8-2; Z4YKA3 Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1; Isoform 3 of Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3; Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1; Isoform 2 of Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3; Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1 0 3 3 0.5445 0 1 1 1 471.63782 1412.8989 1412.89896 -0.04 -0.00002 0/0 0 0 24347246 HCD 30 MS2 21.366 844.1 61.941 59.0517 16932 16932 16929 QEplus033719.raw F4 689.4 903.8 1073.7 622.1 856.1 919.3 125 3.82 1 FALSE 1.14E-05 0.0008477 0.677 -250 76688 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESHTAVVYTEK [R].eSHTAVVYTEk.[D] N-Term(TMT6plex); K11(TMT6plex) 2 Q61191 Host cell factor 1 OS=Mus musculus OX=10090 GN=Hcfc1 PE=1 SV=2 Q61191; B1AUX2 Host cell factor 1 OS=Mus musculus OX=10090 GN=Hcfc1 PE=1 SV=2; Host cell factor 1 OS=Mus musculus OX=10090 GN=Hcfc1 PE=1 SV=1 0 3 3 0.7508 0 1 1 1 574.65424 1721.94815 1721.94742 0.43 0.00024 0/0 0 0 10802506 HCD 30 MS2 53.07793 928.6 110 59.0638 16937 16937 16929 QEplus033719.raw F4 1050.8 727.1 1016.5 738.3 1097 941.8 465 3.25 1 FALSE 1.14E-05 4.81E-05 0.918 -250 76694 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGTIPK [R].eGTIPk.[L] N-Term(TMT6plex); K6(TMT6plex) 3 B9EKB8 Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1 B9EKB8; B7ZWC4; Q07113 Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Cation-independent mannose-6-phosphate receptor OS=Mus musculus OX=10090 GN=Igf2r PE=1 SV=1 0 2 2 0.1649 0 1 1 1 551.84839 1102.6895 1102.68723 2.06 0.00113 0/0 0 0 10737347 HCD 30 MS2 12.23909 1036.9 110 59.0663 16938 16938 16929 QEplus033719.raw F4 1108.8 827.7 1020.5 946.6 1238.6 1079.3 221 1.88 1 FALSE 0.008863 0.1578 -0.096 -250 76700 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEESSSRLPEDIR [R].sEESSSRLPEDIR.[R] N-Term(TMT6plex) 1 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 1 3 3 0.5154 0 1 1 1 578.63403 1733.88755 1733.88672 0.48 0.00027 0/0 0 0 9302985 HCD 30 MS2 33.40908 568.8 110 59.0687 16939 16939 16929 QEplus033719.raw F4 586.6 474 596.7 532.6 679 543.7 226 2.93 1 FALSE 1.14E-05 6.17E-05 0.897 -250 76720 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGRDYVQK [K].vGRDYVQk.[A] N-Term(TMT6plex); K8(TMT6plex) 13 Q5SV64; Q8VDD5 Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q6URW6-2; Q80T68; Q8BLI3; Q8BWI3; Q5SV64; Q3UH59; Q8VDD5; A0A140LI60; Q6URW6; Q8BLI1; K3W4R2; Q6URW6-3; Q61879 Isoform 2 of Myosin-14 OS=Mus musculus OX=10090 GN=Myh14; MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-14 (Fragment) OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Myosin-14 OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-14 OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Isoform 3 of Myosin-14 OS=Mus musculus OX=10090 GN=Myh14; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 1 2 2 0.4195 0 1 1 1 711.92755 1422.84783 1422.84692 0.64 0.00045 0/0 0 0 5450871.5 HCD 30 MS2 17.83451 261.3 110 59.0833 16944 16944 16940 QEplus033719.raw F4 263.3 247.3 304.7 158.1 373.7 220.8 422 2.67 2 FALSE 4.43E-05 0.001675 0.615 -250 76729 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNLGAGNGNLQGPR [R].gNLGAGNGNLQGPR.[H] N-Term(TMT6plex) 10 Q6ZQ61 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1 Q6ZQ61; Q4FJT0; A0A494B9X1; A0A494BAL7; Q3TTX0; A0A494B9Q4; A0A494BAZ7; A0A494BAD4; Q3TZN1; Q5BL18 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matr3 protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Small nucleolar RNA host gene 4 (Fragment) OS=Mus musculus OX=10090 GN=Snhg4 PE=4 SV=1; Small nucleolar RNA host gene 4 (Fragment) OS=Mus musculus OX=10090 GN=Snhg4 PE=4 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin-3 OS=Mus musculus OX=10090 GN=Matr3 PE=4 SV=1; Matrin-3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1; Matrin-3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin 3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1 0 2 2 0.7982 0 1 1 1 777.42188 1553.83647 1553.83457 1.23 0.00095 0/0 0 0 4801459 HCD 30 MS2 0 233.2 110 59.0858 16945 16945 16940 QEplus033719.raw F4 252.9 211.5 249 187.8 224.5 273.4 353 4.56 1 FALSE 1.14E-05 6.44E-14 2.603 -250 76740 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVDPQGLR [K].eVDPQGLR.[T] N-Term(TMT6plex) 13 Q3TCR7; P39054 Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1;Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2 Q3TCR7; P39054; E9QLL2; P39054-2; G3X9G4; F8WIV5; Q3T9X3; Q8BZ98; Q9CUM4; Q8BZ98-2; Q8BUT2; Q3TBU6; G3UZZ3 Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm3 PE=1 SV=1; Isoform 2 of Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Mus musculus OX=10090 GN=Dnm3 PE=1 SV=1; Dynamin GTPase (Fragment) OS=Mus musculus OX=10090 GN=Dnm2 PE=2 SV=1; Isoform 2 of Dynamin-3 OS=Mus musculus OX=10090 GN=Dnm3; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm3 PE=2 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=2 SV=1; Dynamin GTPase (Fragment) OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1 0 2 2 0.4957 0 1 1 1 571.82471 1142.64214 1142.6367 4.76 0.00272 0/0 0 0 20411764 HCD 30 MS2 54.93862 739.8 30.816 59.0903 16947 16947 16940 QEplus033719.raw F4 710.1 684.7 791.8 714.3 795.5 742.4 166 2.34 2 FALSE 0.001607 0.02541 0.242 -250 76746 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAGVAK [K].vAGVAk.[V] N-Term(TMT6plex); K6(TMT6plex) 1 Q99LC5 "Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Etfa PE=1 SV=2" Q99LC5 "Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Etfa PE=1 SV=2" 0 2 2 0.2956 0 1 1 1 501.84006 1002.67284 1002.67119 1.65 0.00083 0/0 0 0 12186537 HCD 30 MS2 38.40103 1267.6 110 59.0928 16948 16948 16940 QEplus033719.raw F4 1779.7 934.5 1405.1 1208.1 987.3 1290.8 20 2.03 1 FALSE 0.006218 0.101 0.004 -250 76756 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YSEEMK [RK].ySEEMk.[TK] N-Term(TMT6plex); K6(TMT6plex) 4 P42669 Transcriptional activator protein Pur-alpha OS=Mus musculus OX=10090 GN=Pura PE=1 SV=1 Q9WTR0; P42669; Q8C6E9; Q8BSA6 Matrix metalloproteinase-16 OS=Mus musculus OX=10090 GN=Mmp16 PE=2 SV=3; Transcriptional activator protein Pur-alpha OS=Mus musculus OX=10090 GN=Pura PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pura PE=2 SV=1; DUF3377 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Mmp16 PE=2 SV=1 0 2 2 0.2827 0 1 1 1 622.8338 1244.66033 1244.6597 0.51 0.00032 0/0 0 0 8727798 HCD 30 MS2 43.70901 1050.5 110 59.0954 16949 16949 16940 QEplus033719.raw F4 1179.4 723.6 1044.9 1003.7 1374.4 977.1 181 1.91 1 FALSE 0.00611 0.1002 0.006 -250 76764 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVADALNR [R].aVADALNR.[Q] N-Term(TMT6plex) 5 D3Z6W1 Microtubule-associated protein 6 OS=Mus musculus OX=10090 GN=Map6 PE=1 SV=1 D3Z6W1; Q7TSJ2-2; Q7TSJ2; Q7TSJ2-3; A0A140LIT9 Microtubule-associated protein 6 OS=Mus musculus OX=10090 GN=Map6 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 6 OS=Mus musculus OX=10090 GN=Map6; Microtubule-associated protein 6 OS=Mus musculus OX=10090 GN=Map6 PE=1 SV=2; Isoform 3 of Microtubule-associated protein 6 OS=Mus musculus OX=10090 GN=Map6; Microtubule-associated protein 6 OS=Mus musculus OX=10090 GN=Map6 PE=1 SV=1 0 2 2 0.4093 0 1 1 1 529.81323 1058.61919 1058.61557 3.41 0.00181 0/0 0 0 8241466 HCD 30 MS2 11.38971 943.7 110 59.0979 16950 16950 16940 QEplus033719.raw F4 993 755.1 1041.8 885.8 932.5 1054 311 2.37 1 FALSE 0.0003496 0.006861 0.461 -250 76772 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YRPGTVALR [R].yRPGTVALR.[E] N-Term(TMT6plex) 11 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; E0CZ27; E0CYR7; P68433; F8WI35; B9EI85; E0CYN1; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; H3.3 histone A (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; H3.3 histone A (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 0 2 2 0.4506 0 1 1 1 631.38287 1261.75847 1261.75782 0.51 0.00032 0/0 0 0 187296976 HCD 30 MS2 4.762964 327.7 10.4 59.1052 16952 16952 16951 QEplus033719.raw F4 274.3 394.4 372.8 201.2 468.9 254.8 577 2.33 2 FALSE 0.002603 0.05145 0.138 -250 76815 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSSETLECK [K].tSSETLEck.[G] N-Term(TMT6plex); C8(Carbamidomethyl); K9(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.6844 0 1 1 1 756.90314 1512.799 1512.79798 0.67 0.00051 0/0 0 0 13783539 HCD 30 MS2 9.385377 861.4 110 59.122 16959 16959 16951 QEplus033719.raw F4 1106.5 484.3 1054.6 799.7 683.6 1039.7 295 3.77 1 FALSE 1.14E-05 4.12E-06 1.121 -250 76821 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATVVESSEK [R].aTVVESSEk.[A] N-Term(TMT6plex); K9(TMT6plex) 1 A8IP69 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 A8IP69 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 0 2 2 0.4588 0 1 1 1 704.41119 1407.81511 1407.80953 3.96 0.00279 0/0 0 0 8169464 HCD 30 MS2 0 584.9 110 59.1245 16960 16960 16951 QEplus033719.raw F4 676.7 462.6 623.9 605.4 568.6 572.1 462 3.4 1 FALSE 1.14E-05 1.37E-06 1.211 -250 76831 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGYNVNDEK [K].kGYNVNDEk.[A] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 1 3 3 0.6211 0 1 1 1 585.34119 1754.00901 1754.00516 2.19 0.00128 0/0 0 0 7827973.5 HCD 30 MS2 19.51385 1128.7 110 59.127 16961 16961 16951 QEplus033719.raw F4 1191.6 1019.9 1185 985.5 1339.9 1050.5 417 3.51 1 FALSE 1.14E-05 8.67E-08 1.439 -250 76838 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERIVEEANK [K].eRIVEEANk.[A] N-Term(TMT6plex); K9(TMT6plex) 3 Q3U6W4 Heme oxygenase OS=Mus musculus OX=10090 GN=Hmox2 PE=2 SV=1 Q3U6W4; D3YX62; O70252 Heme oxygenase OS=Mus musculus OX=10090 GN=Hmox2 PE=2 SV=1; Heme oxygenase (biliverdin-producing) (Fragment) OS=Mus musculus OX=10090 GN=Hmox2 PE=1 SV=1; Heme oxygenase 2 OS=Mus musculus OX=10090 GN=Hmox2 PE=1 SV=1 1 3 3 0.4227 0 1 1 1 515.97186 1545.90104 1545.90008 0.62 0.00032 0/0 0 0 16496598 HCD 30 MS2 33.2286 861.1 66.714 59.1343 16963 16963 16962 QEplus033719.raw F4 850.1 737.1 953.2 747.6 930.7 948.1 511 2.91 1 FALSE 0.002123 0.03984 0.175 -250 76842 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNDFAEK [R].sNDFAEk.[N] N-Term(TMT6plex); K7(TMT6plex) 3 B0V2Q7 Lclat1 protein OS=Mus musculus OX=10090 GN=Lclat1 PE=1 SV=1 B0V2Q7; A0A3B2WDB3; B0V2Q9 Lclat1 protein OS=Mus musculus OX=10090 GN=Lclat1 PE=1 SV=1; Lysocardiolipin acyltransferase 1 (Fragment) OS=Mus musculus OX=10090 GN=Lclat1 PE=1 SV=1; Lysocardiolipin acyltransferase 1 (Fragment) OS=Mus musculus OX=10090 GN=Lclat1 PE=1 SV=9 0 2 2 0.1468 0 1 1 1 634.84589 1268.6845 1268.68869 -3.3 -0.0021 0/0 0 0 4815675.5 HCD 30 MS2 33.54456 1047.4 110 59.1369 16964 16964 16962 QEplus033719.raw F4 1063.9 779.8 1016.2 1075.4 1199.6 1149.7 283 2.18 1 FALSE 0.001028 0.01349 0.352 -250 76848 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMVSAYPR [R].gMVSAYPR.[Q] N-Term(TMT6plex) 7 Q921D5 DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1 Q921D5; Q9D077; P49717; Q8C1Z0; Q5DTS8; Q3UA65; Q3UXG9 DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1; DNA replication licensing factor MCM4 OS=Mus musculus OX=10090 GN=Mcm4 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1; DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1; MCM_lid domain-containing protein OS=Mus musculus OX=10090 GN=Mcm4 PE=2 SV=1 0 2 2 0.4229 0 1 1 1 555.30371 1109.60015 1109.59748 2.4 0.00133 0/0 0 0 14031411 HCD 30 MS2 18.83808 1070.4 107.122 59.1393 16965 16965 16962 QEplus033719.raw F4 1076 1092.7 1095.2 728.7 1501.5 928.2 183 2.53 1 FALSE 0.002097 0.03907 0.178 -250 76887 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNLGAGNGNLQGPR [R].gNLGAGNGNLQGPR.[H] N-Term(TMT6plex) 10 Q6ZQ61 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1 Q6ZQ61; Q4FJT0; A0A494B9X1; A0A494BAL7; Q3TTX0; A0A494B9Q4; A0A494BAZ7; A0A494BAD4; Q3TZN1; Q5BL18 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matr3 protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Small nucleolar RNA host gene 4 (Fragment) OS=Mus musculus OX=10090 GN=Snhg4 PE=4 SV=1; Small nucleolar RNA host gene 4 (Fragment) OS=Mus musculus OX=10090 GN=Snhg4 PE=4 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin-3 OS=Mus musculus OX=10090 GN=Matr3 PE=4 SV=1; Matrin-3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1; Matrin-3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin 3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1 0 3 3 0.7381 0 1 1 1 518.61804 1553.83957 1553.83457 3.22 0.00167 0/0 0 0 5227262.5 HCD 30 MS2 12.5168 630.7 110 59.1518 16970 16970 16962 QEplus033719.raw F4 762.4 512.7 649.1 492 693.6 674.6 358 5.46 1 FALSE 1.14E-05 1.05E-08 1.613 -250 76894 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DACLTGSK [R].dAcLTGSk.[I] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 1 Q62356 Follistatin-related protein 1 OS=Mus musculus OX=10090 GN=Fstl1 PE=1 SV=2 Q62356 Follistatin-related protein 1 OS=Mus musculus OX=10090 GN=Fstl1 PE=1 SV=2 0 2 2 0.6206 0 1 1 1 655.36285 1309.71843 1309.71861 -0.13 -0.00009 0/0 0 0 5056072 HCD 30 MS2 0 562.6 110 59.1543 16971 16971 16962 QEplus033719.raw F4 568.7 478.2 498.7 348.8 988.2 493.1 334 3.11 1 FALSE 1.14E-05 0.0001504 0.823 -250 76913 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGHITVEK [R].tGHITVEk.[I] N-Term(TMT6plex); K8(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.4437 0 1 1 1 448.27548 1342.81189 1342.80947 1.8 0.00081 0/0 0 0 5015407 HCD 30 MS2 51.30083 707.5 110 59.1641 16974 16974 16973 QEplus033719.raw F4 786 591.9 722.5 549.3 883.9 711.5 303 3.02 2 FALSE 1.14E-05 0.0007303 0.69 -250 76920 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIPHLVTHDAR [K].gIPHLVTHDAR.[T] N-Term(TMT6plex) 5 P62702 "40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2" V9GWY0; Q545F8; P62702; Q3V1Z5; Q3UXQ6 "40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Gm15013 PE=3 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1; 40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4l PE=2 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1" 0 2 2 0.7442 0 1 1 1 722.91956 1444.83183 1444.82221 6.66 0.00481 0/0 0 0 4138242.75 HCD 30 MS2 0 286 110 59.1667 16975 16975 16973 QEplus033719.raw F4 299.1 225.4 322.2 265.7 279.3 324.1 414 3.91 1 FALSE 1.14E-05 2.55E-10 1.92 -250 76928 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVQGQLK [R].sVQGQLk.[D] N-Term(TMT6plex); K7(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 0 3 3 0.2246 0 1 1 1 406.59247 1217.76285 1217.76179 0.87 0.00035 0/0 0 0 61542876 HCD 30 MS2 11.73139 419.6 22.465 59.1689 16976 16976 16973 QEplus033719.raw F4 483 122.2 343.2 763.5 154 651.6 334 2.85 1 FALSE 0.0008445 0.01175 0.377 -250 76935 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSSETLECK [K].tSSETLEck.[G] N-Term(TMT6plex); C8(Carbamidomethyl); K9(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 3 3 0.5648 0 1 1 1 504.93762 1512.79831 1512.79798 0.22 0.00011 0/0 0 0 29109942 HCD 30 MS2 28.58838 1100.4 63.481 59.1712 16977 16977 16973 QEplus033719.raw F4 1290.9 796.8 1264.8 986.6 1034.5 1228.7 276 3.86 1 FALSE 1.14E-05 0.0009081 0.671 -250 76941 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLVYESDQNK [R].hLVYESDQNk.[DV] N-Term(TMT6plex); K10(TMT6plex) 8 Q6XLQ8; Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1;Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 Q3UG11; G3UXA8; Q6XLQ8; Q3TL33; G3V004; G3UXA3; G3UWV3; Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 0 3 3 0.6407 0 1 1 1 564.30756 1690.90812 1690.91646 -4.93 -0.00278 0/0 0 0 22584094 HCD 30 MS2 20.92476 929.5 46.802 59.1734 16978 16978 16973 QEplus033719.raw F4 944.8 913.8 964.8 888.3 1048.9 816.6 347 4.62 2 FALSE 1.14E-05 7.19E-06 1.075 -250 76948 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPITDDDVDR [K].kPITDDDVDR.[I] N-Term(TMT6plex); K1(TMT6plex) 1 Q9JIF7 Coatomer subunit beta OS=Mus musculus OX=10090 GN=Copb1 PE=1 SV=1 Q9JIF7 Coatomer subunit beta OS=Mus musculus OX=10090 GN=Copb1 PE=1 SV=1 0 3 3 0.5967 0 1 1 1 544.63867 1631.90146 1631.90047 0.61 0.00033 0/0 0 0 25593888 HCD 30 MS2 47.81667 1169.2 75.145 59.1757 16979 16979 16973 QEplus033719.raw F4 1187.5 974.8 1254.2 1072.7 1269.2 1256.9 372 3.62 1 FALSE 1.14E-05 1.31E-05 1.025 -250 76956 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CVSCLPGQR [R].cVScLPGQR.[D] N-Term(TMT6plex); C1(Carbamidomethyl); C4(Carbamidomethyl) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.6812 0 1 1 1 653.33435 1305.66142 1305.66049 0.71 0.00047 0/0 0 0 25255982 HCD 30 MS2 46.69015 1014.8 64.823 59.178 16980 16980 16973 QEplus033719.raw F4 1059.2 841.3 1057.7 884.1 1253.9 992.6 145 2.98 1 FALSE 1.14E-05 1.23E-05 1.03 -250 76986 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMSDEFRPR [R].aMSDEFRPR.[S] N-Term(TMT6plex) 2 P35569 Insulin receptor substrate 1 OS=Mus musculus OX=10090 GN=Irs1 PE=1 SV=1 P35569; Q543V3 Insulin receptor substrate 1 OS=Mus musculus OX=10090 GN=Irs1 PE=1 SV=1; Insulin receptor substrate 1 OS=Mus musculus OX=10090 GN=Irs1 PE=1 SV=1 0 3 3 0.5317 0 1 1 1 446.56549 1337.68192 1337.68334 -1.06 -0.00047 0/0 0 0 5294803 HCD 30 MS2 57.69219 801.2 110 59.1949 16986 16986 16984 QEplus033719.raw F4 764.8 746.9 865.6 629.2 985.4 815.3 185 3.31 1 FALSE 1.14E-05 0.0002886 0.769 -250 76994 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKPGAPVR [K].lkPGAPVR.[S] N-Term(TMT6plex); K2(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 3 3 0.5749 0 1 1 1 432.62357 1295.85614 1295.85636 -0.17 -0.00007 0/0 0 0 33517116 HCD 30 MS2 41.93173 831.1 23.054 59.1971 16987 16987 16984 QEplus033719.raw F4 681.4 577.1 1053.1 761.5 651.9 1261.6 27 2.47 1 FALSE 0.003809 0.07206 0.082 -250 77036 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVVAGSSEAAQK [R].tVVAGSSEAAQk.[A] N-Term(TMT6plex); K12(TMT6plex) 2 Q99LD8 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1" Q99LD8; O08972 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1; Dimethylargininase OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1" 0 2 2 0.7251 0 1 1 1 803.46558 1605.92388 1605.92121 1.66 0.00133 0/0 0 0 6466239.5 HCD 30 MS2 13.95986 410.7 110 59.2094 16992 16992 16984 QEplus033719.raw F4 410.1 373.6 512.6 357.1 362.5 448.2 437 5.02 1 FALSE 1.14E-05 1.77E-12 2.33 -250 77044 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQQACIEAK [R].aQQAcIEAk.[H] N-Term(TMT6plex); C5(Carbamidomethyl); K9(TMT6plex) 4 Q9WUD1 E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1 Q9WUD1; Q3TYJ0; A0A494BBI6; A0A494BBF6 E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stub1 PE=2 SV=1; E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1; E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1 0 2 2 0.4109 0 1 1 1 738.91431 1476.82134 1476.82447 -2.12 -0.00157 0/0 0 0 5736336.5 HCD 30 MS2 0 526.7 110 59.212 16993 16993 16984 QEplus033719.raw F4 517.3 537 531.7 407.2 677.7 489.1 413 4.04 1 FALSE 1.14E-05 8.71E-07 1.249 -250 77051 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYDTGEVK [K].sYDTGEVk.[V] N-Term(TMT6plex); K8(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.4729 0 1 1 1 678.87421 1356.74114 1356.74112 0.01 0.00001 0/0 0 0 5321091 HCD 30 MS2 49.58009 923.7 110 59.2145 16994 16994 16984 QEplus033719.raw F4 1060.7 366.1 872.6 1419.3 476.1 1347.3 219 2.77 2 FALSE 1.14E-05 0.0001604 0.818 -250 77058 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYGMGK [K].tYGMGk.[G] N-Term(TMT6plex); K6(TMT6plex) 6 Q3TS38 UDP-glucose 6-dehydrogenase OS=Mus musculus OX=10090 GN=Ugdh PE=1 SV=1 Q3TS38; Q3TJ71; Q3TI06; Q3TJE8; D3YXP9; Q3UIZ1 UDP-glucose 6-dehydrogenase OS=Mus musculus OX=10090 GN=Ugdh PE=1 SV=1; UDP-glucose 6-dehydrogenase OS=Mus musculus OX=10090 GN=Ugdh PE=2 SV=1; UDP-glucose 6-dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ugdh PE=2 SV=1; UDP-glucose 6-dehydrogenase OS=Mus musculus OX=10090 GN=Ugdh PE=2 SV=1; UDP-glucose 6-dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ugdh PE=1 SV=8; UDP-glucose 6-dehydrogenase OS=Mus musculus OX=10090 GN=Ugdh PE=2 SV=1 0 2 2 0.5842 0 1 1 1 557.81989 1114.63249 1114.63309 -0.53 -0.0003 0/0 0 0 24473000 HCD 30 MS2 17.82583 786.4 41.444 59.2263 16998 16998 16995 QEplus033719.raw F4 685.9 838.1 808.8 513.6 1190.4 681.8 208 2.02 1 FALSE 0.006061 0.09957 0.008 -250 77085 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGMVQTEAQYR [R].sGMVQTEAQYR.[F] N-Term(TMT6plex) 2 P35235 Tyrosine-protein phosphatase non-receptor type 11 OS=Mus musculus OX=10090 GN=Ptpn11 PE=1 SV=3 P35235-1; P35235 Isoform 2 of Tyrosine-protein phosphatase non-receptor type 11 OS=Mus musculus OX=10090 GN=Ptpn11; Tyrosine-protein phosphatase non-receptor type 11 OS=Mus musculus OX=10090 GN=Ptpn11 PE=1 SV=3 0 2 2 0.7427 0 1 1 1 749.87909 1498.7509 1498.75214 -0.83 -0.00062 0/0 0 0 8900330 HCD 30 MS2 0 363.2 110 59.2356 17002 17002 16995 QEplus033719.raw F4 376.6 268.8 396.1 335.8 384.6 417.2 139 4.12 1 FALSE 1.14E-05 1.06E-08 1.613 -250 77093 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLAESEEASM [K].rLAESEEASM.[-] N-Term(TMT6plex) 1 Q9Z2X2 26S proteasome non-ATPase regulatory subunit 10 OS=Mus musculus OX=10090 GN=Psmd10 PE=1 SV=3 Q9Z2X2 26S proteasome non-ATPase regulatory subunit 10 OS=Mus musculus OX=10090 GN=Psmd10 PE=1 SV=3 1 2 2 0.7409 0 1 1 1 676.3407 1351.67412 1351.6725 1.2 0.00081 0/0 0 0 6600417 HCD 30 MS2 0 375.5 110 59.2381 17003 17003 16995 QEplus033719.raw F4 390.2 344.7 401.6 289.5 431.6 395.2 142 2.47 1 FALSE 0.0004492 0.007562 0.447 -250 77107 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STVLQQQYNR [K].sTVLQQQYNR.[V] N-Term(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.697 0 1 1 1 733.40167 1465.79607 1465.79606 0.01 0.00001 0/0 0 0 26581558 HCD 30 MS2 8.57677 744.3 110 59.2428 17005 17005 16995 QEplus033719.raw F4 781.3 701.8 800.4 541.7 978.5 662 404 3.96 1 FALSE 1.14E-05 5.44E-08 1.477 -250 77116 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TKYETDAIQR [R].tkYETDAIQR.[T] N-Term(TMT6plex); K2(TMT6plex) 13 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; B2RWX0; B2RQQ1; I6L963; B1AR69; B2RY26; B2RXX9; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 3 3 0.5948 0 1 1 1 561.65454 1682.94907 1682.94776 0.78 0.00044 0/0 0 0 56570164 HCD 30 MS2 3.392562 870.1 28.218 59.2501 17007 17007 17006 QEplus033719.raw F4 898.6 189.1 671.9 1992.9 145.5 1322.3 357 3.06 5 FALSE 1.14E-05 6.10E-06 1.088 -250 77123 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIGSSSKPGEK [K].nIGSSSkPGEk.[K] N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex) 6 Q8CE80 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1 A0A338P6J9; P51125-6; Q8CE80; P51125; P51125-3; P51125-2 Calpain inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 6 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpastatin OS=Mus musculus OX=10090 GN=Cast PE=1 SV=2; Isoform 3 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Isoform 2 of Calpastatin OS=Mus musculus OX=10090 GN=Cast 0 3 3 0.4425 0 1 1 1 597.69073 1791.05765 1791.05792 -0.15 -0.00009 0/0 0 0 20751198 HCD 30 MS2 26.54229 809.7 47.016 59.2524 17008 17008 17006 QEplus033719.raw F4 820.2 709.1 840.5 632.7 1084.3 771.6 427 2.26 1 FALSE 1.14E-05 2.01E-05 0.99 -250 77132 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AASDELSK [K].aASDELSk.[T] N-Term(TMT6plex); K8(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 2 2 0.4678 0 1 1 1 639.86914 1278.731 1278.73055 0.35 0.00023 0/0 0 0 166763424 HCD 30 MS2 8.731583 970.2 11.447 59.2547 17009 17009 17006 QEplus033719.raw F4 988.6 824.1 988.9 807.6 1187.2 1024.6 413 3.42 1 FALSE 1.14E-05 0.0003568 0.751 -250 77139 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLAENISR [R].nLAENISR.[V] N-Term(TMT6plex) 11 Q3UYH9; Q9WUB3 "Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1;Glycogen phosphorylase, muscle form OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=3" Q3UYH9; Q9ET01; E9PUM3; Q3TJQ7; Q3V3U0; Q3UEJ6; Q9WUB3; Q3TFQ8; Q91WP9; Q3UGT5; Q8CI94 "Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Glycogen phosphorylase, liver form OS=Mus musculus OX=10090 GN=Pygl PE=1 SV=4; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygl PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygl PE=1 SV=1; Glycogen phosphorylase, muscle form OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=3; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygl PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Glycogen phosphorylase, brain form OS=Mus musculus OX=10090 GN=Pygb PE=1 SV=3" 0 2 2 0.3984 0 1 1 1 573.32745 1145.64763 1145.6476 0.02 0.00001 0/0 0 0 14730102 HCD 30 MS2 32.87317 1328.8 110 59.2572 17010 17010 17006 QEplus033719.raw F4 1526.4 759.2 1223.3 1817.8 941.5 1704.4 373 2.56 2 FALSE 1.14E-05 0.0001235 0.84 -250 77145 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASYVASTK [K].aSYVASTk.[Y] N-Term(TMT6plex); K8(TMT6plex) 7 Q545R0 "Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1" Q61301-2; Q6NV50; E0CXB9; Q3TGQ3; Q61301-3; Q545R0; Q61301 "Isoform 2 of Catenin alpha-2 OS=Mus musculus OX=10090 GN=Ctnna2; Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=2 SV=1; Alpha N-catenin OS=Mus musculus OX=10090 GN=Ctnna2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctnna1 PE=2 SV=1; Isoform 3 of Catenin alpha-2 OS=Mus musculus OX=10090 GN=Ctnna2; Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1; Catenin alpha-2 OS=Mus musculus OX=10090 GN=Ctnna2 PE=1 SV=3" 0 2 2 0.396 0 1 1 1 642.88281 1284.75835 1284.75637 1.54 0.00099 0/0 0 0 9323622 HCD 30 MS2 43.64925 1161.4 110 59.2597 17011 17011 17006 QEplus033719.raw F4 995.1 1015.7 1271.9 864.2 1631.5 1190.1 305 2.98 1 FALSE 1.14E-05 0.0002806 0.771 -250 77154 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVVAGSSEAAQK [R].tVVAGSSEAAQk.[A] N-Term(TMT6plex); K12(TMT6plex) 2 Q99LD8 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1" Q99LD8; O08972 "N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1; Dimethylargininase OS=Mus musculus OX=10090 GN=Ddah2 PE=1 SV=1" 0 3 3 0.7014 0 1 1 1 535.97882 1605.92191 1605.92121 0.44 0.00023 0/0 0 0 28767600 HCD 30 MS2 20.9324 885.8 68.215 59.262 17012 17012 17006 QEplus033719.raw F4 862.9 787.2 1032.4 726.6 981.5 924.2 427 4.99 1 FALSE 1.14E-05 1.22E-09 1.791 -250 77159 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMVAAGDNK [K].eMVAAGDNk.[I] N-Term(TMT6plex); K9(TMT6plex) 2 D3Z7P3 "Glutaminase kidney isoform, mitochondrial OS=Mus musculus OX=10090 GN=Gls PE=1 SV=1" D3Z7P3-2; D3Z7P3 "Isoform 2 of Glutaminase kidney isoform, mitochondrial OS=Mus musculus OX=10090 GN=Gls; Glutaminase kidney isoform, mitochondrial OS=Mus musculus OX=10090 GN=Gls PE=1 SV=1" 0 2 2 0.6344 0 1 1 1 696.88214 1392.75701 1392.75572 0.92 0.00064 0/0 0 0 20448202 HCD 30 MS2 13.049 876.2 110 59.2645 17013 17013 17006 QEplus033719.raw F4 844.1 806.8 975.5 767.6 870 993.2 373 3.2 1 FALSE 1.14E-05 1.94E-06 1.183 -250 77170 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVPNMPQQR [R].aVPNMPQQR.[Q] N-Term(TMT6plex) 1 F6V8M6 Ataxin-2 (Fragment) OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=2 F6V8M6 Ataxin-2 (Fragment) OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=2 0 2 2 0.442 0 1 1 1 635.35156 1269.69585 1269.69351 1.84 0.00117 0/0 0 0 8895991 HCD 30 MS2 23.87588 964.5 110 59.2693 17015 17015 17006 QEplus033719.raw F4 950.9 806.9 1002.8 861.9 1082.8 1081.4 227 2.24 1 FALSE 0.001231 0.01662 0.314 -250 77182 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAIQEIQR [K].nAIQEIQR.[KA] N-Term(TMT6plex) 4 Q9JLV5 Cullin-3 OS=Mus musculus OX=10090 GN=Cul3 PE=1 SV=1 Q9JLV5; Q6ZQ84; F6ZZK0; F6R0N8 Cullin-3 OS=Mus musculus OX=10090 GN=Cul3 PE=1 SV=1; MKIAA0617 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0617 PE=3 SV=1; Cullin-3 (Fragment) OS=Mus musculus OX=10090 GN=Cul3 PE=1 SV=1; Cullin-3 (Fragment) OS=Mus musculus OX=10090 GN=Cul3 PE=1 SV=1 0 2 2 0.4737 0 1 1 1 600.84875 1200.69023 1200.6898 0.36 0.00022 0/0 0 0 8611151 HCD 30 MS2 9.743126 735.5 110 59.2791 17018 17018 17017 QEplus033719.raw F4 764.9 594.8 808.3 679.9 754.8 810.4 329 3.04 1 FALSE 1.14E-05 0.0001262 0.838 -250 77187 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MLEDPQER [K].mLEDPQER.[E] N-Term(TMT6plex) 1 D3Z0M9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx23 PE=1 SV=1 D3Z0M9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx23 PE=1 SV=1 0 2 2 0.6312 0 1 1 1 623.81915 1246.63103 1246.6299 0.9 0.00056 0/0 0 0 8537183 HCD 30 MS2 25.02748 962.1 110 59.2816 17019 17019 17017 QEplus033719.raw F4 960.3 839.4 1006.2 716.5 1222.7 1027.4 148 2.63 1 FALSE 0.0006216 0.009216 0.417 -250 77193 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLEDEAK [K].tLEDEAk.[T] N-Term(TMT6plex); K7(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 2 2 0.446 0 1 1 1 632.36359 1263.7199 1263.71965 0.19 0.00012 0/0 0 0 110423912 HCD 30 MS2 30.74312 1241.7 15.129 59.2839 17020 17020 17017 QEplus033719.raw F4 1351.6 1175.7 1331.3 875.4 1517.8 1198.4 355 2.87 1 FALSE 0.0007151 0.01039 0.398 -250 77200 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SHCIAEVEK [K].sHcIAEVEk.[D] N-Term(TMT6plex); C3(Carbamidomethyl); K9(TMT6plex) 1 P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor 0 2 2 0.4935 0 1 1 1 765.92023 1530.83318 1530.83503 -1.21 -0.00093 0/0 0 0 5580095.5 HCD 30 MS2 0 476.1 110 59.2865 17021 17021 17017 QEplus033719.raw F4 496.4 181.9 263.2 151.4 1573.9 189.5 340 3.87 1 TRUE 1.14E-05 1.14E-06 1.226 -250 77214 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSEGSGTSPVPDK [K].gSEGSGTSPVPDk.[S] N-Term(TMT6plex); K13(TMT6plex) 2 Q924T2 "28S ribosomal protein S2, mitochondrial OS=Mus musculus OX=10090 GN=Mrps2 PE=1 SV=1" Q8BQ99; Q924T2 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Mrps2 PE=2 SV=1; 28S ribosomal protein S2, mitochondrial OS=Mus musculus OX=10090 GN=Mrps2 PE=1 SV=1" 0 2 2 0.5982 0 1 1 1 838.44958 1675.89189 1675.8903 0.95 0.0008 0/0 0 0 3525259.75 HCD 30 MS2 0 206.8 110 59.2915 17023 17023 17017 QEplus033719.raw F4 195 185.3 249.9 192.7 198.1 219.8 361 3.41 1 FALSE 1.14E-05 6.66E-12 2.22 -250 77231 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RKGDEVDGTDEVAK [K].rkGDEVDGTDEVAk.[K] N-Term(TMT6plex); K2(TMT6plex); K14(TMT6plex) 8 Q3TX36 Poly [ADP-ribose] polymerase OS=Mus musculus OX=10090 GN=Parp1 PE=2 SV=1 Q3TX36; Q3TIV3; Q3TF18; P11103; Q3TM68; Q3UJ03; Q3U868; Q921K2 Poly [ADP-ribose] polymerase OS=Mus musculus OX=10090 GN=Parp1 PE=2 SV=1; Poly [ADP-ribose] polymerase OS=Mus musculus OX=10090 GN=Parp1 PE=2 SV=1; Poly [ADP-ribose] polymerase OS=Mus musculus OX=10090 GN=Parp1 PE=2 SV=1; Poly [ADP-ribose] polymerase 1 OS=Mus musculus OX=10090 GN=Parp1 PE=1 SV=3; Poly [ADP-ribose] polymerase OS=Mus musculus OX=10090 GN=Parp1 PE=2 SV=1; Poly [ADP-ribose] polymerase OS=Mus musculus OX=10090 GN=Parp1 PE=2 SV=1; Poly [ADP-ribose] polymerase (Fragment) OS=Mus musculus OX=10090 GN=Parp1 PE=2 SV=1; Poly [ADP-ribose] polymerase OS=Mus musculus OX=10090 GN=Parp1 PE=1 SV=1 2 4 4 0.5734 0 1 1 1 552.31305 2206.23037 2206.22824 0.97 0.00053 0/0 0 0 6191708 HCD 30 MS2 24.49878 658.7 110 59.2965 17025 17025 17017 QEplus033719.raw F4 697.3 607.5 691.7 475 833.9 646.5 441 3.61 1 FALSE 1.14E-05 3.17E-07 1.332 -250 77237 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLVYESDQNK [R].hLVYESDQNk.[DV] N-Term(TMT6plex); K10(TMT6plex) 8 Q6XLQ8; Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1;Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 Q3UG11; G3UXA8; Q6XLQ8; Q3TL33; G3V004; G3UXA3; G3UWV3; Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 0 2 2 0.6667 0 1 1 1 845.96039 1690.9135 1690.91646 -1.75 -0.00148 0/0 0 0 7050424.5 HCD 30 MS2 0 553.5 110 59.299 17026 17026 17017 QEplus033719.raw F4 540.6 555 623.7 460.6 693.4 447.9 353 4.29 2 FALSE 1.14E-05 5.03E-08 1.484 -250 77246 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APNTPASGANGDGSMSQTQSGSTVK [R].aPNTPASGANGDGSmSQTQSGSTVk.[A] N-Term(TMT6plex); M15(Oxidation); K25(TMT6plex) 1 P15636 SWISS-PROT:P15636 Protease I precursor Lysyl endopeptidase Achromobacter lyticus. P15636 SWISS-PROT:P15636 Protease I precursor Lysyl endopeptidase Achromobacter lyticus. 0 3 3 0.9008 0 1 1 1 942.13123 2824.37912 2824.37833 0.28 0.00026 0/0 0 0 2135850.25 HCD 30 MS2 0 129.2 110 59.3015 17027 17027 17017 QEplus033719.raw F4 220.4 99.4 123 78.3 138.1 116.1 206 7.96 1 TRUE 1.14E-05 6.31E-16 3.131 -250 77265 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEAGIR [R].kLEAGIR.[G] N-Term(TMT6plex); K1(TMT6plex) 6 E9QNN1 DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1 O70133-2; Q3UR42; O70133-3; E9QNN1; A0A087WPL5; O70133 Isoform 2 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; DEAH box protein 9 (Fragment) OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; Isoform 3 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=2 1 3 3 0.1218 0 1 1 1 415.60818 1244.81 1244.80908 0.74 0.00031 0/0 0 0 28940966 HCD 30 MS2 46.24997 792 32.843 59.3136 17031 17031 17028 QEplus033719.raw F4 775.2 730.5 827.5 639.5 1016.6 762.5 418 1.97 1 FALSE 0.006185 0.1008 0.004 -250 77274 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WAAGQNK [K].wAAGQNk.[Q] N-Term(TMT6plex); K7(TMT6plex) 1 Q9JMG1 Endothelial differentiation-related factor 1 OS=Mus musculus OX=10090 GN=Edf1 PE=1 SV=1 Q9JMG1 Endothelial differentiation-related factor 1 OS=Mus musculus OX=10090 GN=Edf1 PE=1 SV=1 0 2 2 0.5586 0 1 1 1 616.86292 1232.71855 1232.71518 2.74 0.00169 0/0 0 0 6594386.5 HCD 30 MS2 41.27851 967.5 110 59.3161 17032 17032 17028 QEplus033719.raw F4 1057.1 725.7 991.4 714 1254.7 1062.2 401 2.56 1 FALSE 0.0001707 0.003952 0.529 -250 77285 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QNQTLYSQK [K].qNQTLYSQk.[S] N-Term(TMT6plex); K9(TMT6plex) 6 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; Q62411; Q8C3C3; A0A571BF46; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 2 2 0.6658 0 1 1 1 784.4469 1567.88652 1567.88443 1.34 0.00105 0/0 0 0 4870821 HCD 30 MS2 0 230.5 110 59.3211 17034 17034 17028 QEplus033719.raw F4 240.2 57.8 217.2 384.2 78.3 405.1 384 4.04 1 FALSE 1.14E-05 2.99E-07 1.337 -250 77313 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQGFETK [R].eQGFETk.[D] N-Term(TMT6plex); K7(TMT6plex) 4 P55264 Adenosine kinase OS=Mus musculus OX=10090 GN=Adk PE=1 SV=2 A0A286YCD7; P55264; P55264-2; Q8BWS6 Adenosine kinase (Fragment) OS=Mus musculus OX=10090 GN=Adk PE=1 SV=1; Adenosine kinase OS=Mus musculus OX=10090 GN=Adk PE=1 SV=2; Isoform Short of Adenosine kinase OS=Mus musculus OX=10090 GN=Adk; PfkB domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Adk PE=2 SV=1 0 2 2 0.5064 0 1 1 1 648.86346 1296.71965 1296.71999 -0.26 -0.00017 0/0 0 0 19388186 HCD 30 MS2 62.90617 1757.4 110 59.3304 17038 17038 17028 QEplus033719.raw F4 1733.1 1465.5 1948.6 1482.2 1892 2023.3 340 2.35 1 FALSE 0.00131 0.01782 0.301 -250 77318 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVQGQLK [R].sVQGQLk.[D] N-Term(TMT6plex); K7(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 0 2 2 0.2812 0 1 1 1 609.38495 1217.76262 1217.76179 0.68 0.00041 0/0 0 0 90786256 HCD 30 MS2 55.74055 1321.9 17.718 59.3377 17040 17040 17039 QEplus033719.raw F4 1538.5 332.9 1025.6 2467.3 477 2089.9 427 2.24 1 FALSE 0.002049 0.03614 0.189 -250 77328 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMTHLQK [K].eMTHLQk.[E] N-Term(TMT6plex); K7(TMT6plex) 2 Q9CU62 Structural maintenance of chromosomes protein 1A OS=Mus musculus OX=10090 GN=Smc1a PE=1 SV=4 Q9CU62; Q7TNG4 Structural maintenance of chromosomes protein 1A OS=Mus musculus OX=10090 GN=Smc1a PE=1 SV=4; Smc1a protein (Fragment) OS=Mus musculus OX=10090 GN=Smc1a PE=2 SV=1 0 3 3 0.4907 0 1 1 1 448.92877 1344.77176 1344.77098 0.58 0.00026 0/0 0 0 14968804 HCD 30 MS2 38.03109 905.7 70.549 59.34 17041 17041 17039 QEplus033719.raw F4 918.6 855.9 977.6 672.5 1097.7 912 348 3.22 1 FALSE 0.0004888 0.007743 0.444 -250 77343 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEMMEYR [K].qEMMEYR.[H] N-Term(TMT6plex) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 2 2 0.5397 0 1 1 1 608.28906 1215.57085 1215.56995 0.74 0.00045 0/0 0 0 157675520 HCD 30 MS2 8.692889 720.7 9.045 59.3445 17043 17043 17039 QEplus033719.raw F4 849.5 255.3 667.5 1176.6 340.1 1035.5 34 2.52 1 FALSE 0.004898 0.08564 0.046 -250 77361 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHETNLK [R].iHETNLk.[K] N-Term(TMT6plex); K7(TMT6plex) 1 Q99KI0 "Aconitate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Aco2 PE=1 SV=1" Q99KI0 "Aconitate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Aco2 PE=1 SV=1" 0 3 3 0.4256 0 1 1 1 438.27142 1312.79972 1312.79891 0.62 0.00027 0/0 0 0 17441154 HCD 30 MS2 52.52976 642.4 33.025 59.3516 17046 17046 17039 QEplus033719.raw F4 790.5 516.8 608.5 693.3 694.6 551 287 3.83 1 FALSE 5.44E-05 0.001785 0.609 -250 77371 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FESDPATHNEPGVR [K].fESDPATHNEPGVR.[L] N-Term(TMT6plex) 7 Q8C1B7 Septin-11 OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=4 A0A0J9YUV6; Q8C1B7; Q8C1B7-3; A0A0J9YVA6; A0A0J9YUL3; A0A0J9YTY0; Q8C1B7-2 Septin-11 (Fragment) OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=1; Septin-11 OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=4; Isoform 3 of Septin-11 OS=Mus musculus OX=10090 GN=Septin11; Septin-11 (Fragment) OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=1; Isoform 2 of Septin-11 OS=Mus musculus OX=10090 GN=Septin11 0 3 3 0.7284 0 1 1 1 595.6311 1784.87876 1784.87649 1.27 0.00076 0/0 0 0 13885808 HCD 30 MS2 15.39823 738.6 110 59.3565 17048 17048 17039 QEplus033719.raw F4 756.2 615.8 814.5 648.4 784.5 812.4 134 4.97 1 FALSE 1.14E-05 9.31E-10 1.813 -250 77390 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATVVESSEK [R].aTVVESSEk.[A] N-Term(TMT6plex); K9(TMT6plex) 1 A8IP69 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 A8IP69 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 0 2 2 0.4599 0 1 1 1 704.40961 1407.81194 1407.80953 1.71 0.0012 0/0 0 0 5448886.5 HCD 30 MS2 0 435.9 110 59.3661 17051 17051 17050 QEplus033719.raw F4 442.6 323.4 471.7 469.9 449.5 458.4 443 3.37 1 FALSE 1.14E-05 1.36E-06 1.212 -250 77408 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLVYESDQNK [R].hLVYESDQNk.[DV] N-Term(TMT6plex); K10(TMT6plex) 8 Q6XLQ8; Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1;Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 Q3UG11; G3UXA8; Q6XLQ8; Q3TL33; G3V004; G3UXA3; G3UWV3; Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 0 3 3 0.6774 0 1 1 1 564.31085 1690.918 1690.91646 0.92 0.00052 0/0 0 0 130364120 HCD 30 MS2 12.11502 646.3 13.928 59.3709 17053 17053 17050 QEplus033719.raw F4 659.8 620.2 667.4 532.6 850.3 547.7 345 4.65 2 FALSE 1.14E-05 1.34E-07 1.403 -250 77415 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITEFCHR [K].iTEFcHR.[F] N-Term(TMT6plex); C5(Carbamidomethyl) 13 P09103 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2 P09103; Q3URP6; Q3TWE3; Q3U738; Q3TT76; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; Q3UA23; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 0 3 3 0.7127 0 1 1 1 397.87643 1191.61475 1191.61419 0.47 0.00019 0/0 0 0 57009044 HCD 30 MS2 10.95047 311.9 21.016 59.3731 17054 17054 17050 QEplus033719.raw F4 331 250.9 334.7 284.2 364.6 306.2 171 3.62 1 FALSE 5.44E-05 0.002133 0.592 -250 77424 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KISSPTGSK [R].kISSPTGSk.[D] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 3 O35129 Prohibitin-2 OS=Mus musculus OX=10090 GN=Phb2 PE=1 SV=1 O35129; F6Q8V7; Q3V2V2 Prohibitin-2 OS=Mus musculus OX=10090 GN=Phb2 PE=1 SV=1; Prohibitin (Fragment) OS=Mus musculus OX=10090 GN=Phb2 PE=1 SV=1; Prohibitin OS=Mus musculus OX=10090 GN=Phb2 PE=2 SV=1 1 3 3 0.2827 0 1 1 1 531.33826 1592.00022 1591.99862 1 0.00053 0/0 0 0 50679556 HCD 30 MS2 15.2392 1061.4 33.167 59.3754 17055 17055 17050 QEplus033719.raw F4 1136.1 803 1189.9 1359.4 922.5 957.4 211 3.75 1 FALSE 1.14E-05 2.65E-06 1.157 -250 77433 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNLPGVQHK [K].gNLPGVQHk.[S] N-Term(TMT6plex); K9(TMT6plex) 4 Q60715-2; Q3UF16 Isoform 2 of Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1;Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1 Q60715-2; Q3TN84; Q3UF16; Q60715 Isoform 2 of Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1; Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1 PE=1 SV=2 0 3 3 0.5293 0 1 1 1 469.95465 1407.8494 1407.84725 1.52 0.00072 0/0 0 0 19037192 HCD 30 MS2 14.60971 860.2 78.574 59.3776 17056 17056 17050 QEplus033719.raw F4 1044.5 626.3 855.9 950.9 846 837.4 380 3.93 2 FALSE 1.14E-05 1.50E-06 1.204 -250 77441 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APNTPASGANGDGSMSQTQSGSTVK [R].aPNTPASGANGDGSmSQTQSGSTVk.[A] N-Term(TMT6plex); M15(Oxidation); K25(TMT6plex) 1 P15636 SWISS-PROT:P15636 Protease I precursor Lysyl endopeptidase Achromobacter lyticus. P15636 SWISS-PROT:P15636 Protease I precursor Lysyl endopeptidase Achromobacter lyticus. 0 4 4 0.8562 0 1 1 1 706.85089 2824.38173 2824.37833 1.2 0.00085 0/0 0 0 9276366 HCD 30 MS2 3.850363 261.2 110 59.3802 17057 17057 17050 QEplus033719.raw F4 397.1 199.9 263.6 173.2 262.4 270.9 219 7.3 1 TRUE 1.14E-05 1.49E-12 2.344 -250 77444 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVGPTAEADK [R].aVGPTAEADk.[S] N-Term(TMT6plex); K10(TMT6plex) 6 Q9Z1M8 Protein Red OS=Mus musculus OX=10090 GN=Ik PE=1 SV=2 Q9Z1M8; Q8C7D0; A0A494BAW7; Q8CDT0; Q3TJY5; Q8C2T9 Protein Red OS=Mus musculus OX=10090 GN=Ik PE=1 SV=2; RED_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ik PE=2 SV=1; Protein Red (Fragment) OS=Mus musculus OX=10090 GN=Ik PE=1 SV=1; RED_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ik PE=2 SV=1; RED_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ik PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ik PE=2 SV=1 0 2 2 0.5458 0 1 1 1 708.90833 1416.80937 1416.80987 -0.35 -0.00025 0/0 0 0 11554970 HCD 30 MS2 36.79898 667.5 110 59.3849 17059 17059 17050 QEplus033719.raw F4 768.5 554.5 704.8 617.3 706.8 653.1 425 2.95 1 FALSE 1.14E-05 1.10E-07 1.42 -250 77448 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KANEEELK [K].kANEEELk.[R] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 2 Q99JI4 26S proteasome non-ATPase regulatory subunit 6 OS=Mus musculus OX=10090 GN=Psmd6 PE=1 SV=1 Q8C1T2; Q99JI4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Psmd6 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 6 OS=Mus musculus OX=10090 GN=Psmd6 PE=1 SV=1 1 3 3 0.431 0 1 1 1 550.00134 1647.98948 1647.98845 0.62 0.00034 0/0 0 0 11399318 HCD 30 MS2 20.77608 1540.2 110 59.3874 17060 17060 17050 QEplus033719.raw F4 1807.4 1185.4 1597.9 1620.2 1726.9 1303.6 382 2.9 1 FALSE 5.44E-05 0.001883 0.604 -250 77458 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTGAAGSFK [K].gTGAAGSFk.[L] N-Term(TMT6plex); K9(TMT6plex) 1 P43275 Histone H1.1 OS=Mus musculus OX=10090 GN=H1-1 PE=1 SV=2 P43275 Histone H1.1 OS=Mus musculus OX=10090 GN=H1-1 PE=1 SV=2 0 2 2 0.6667 0 1 1 1 627.36719 1253.7271 1253.72541 1.35 0.00085 0/0 0 0 22664772 HCD 30 MS2 12.61877 1125.6 65.351 59.397 17063 17063 17061 QEplus033719.raw F4 994.9 1234.9 1167.4 654.7 1862 839.5 311 3.36 1 FALSE 1.14E-05 1.96E-06 1.182 -250 77486 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTSGATPAAIRK [K].tTSGATPAAIRk.[L] N-Term(TMT6plex); K12(TMT6plex) 6 Q3UJ44 Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=2 SV=1 D3YTL5; Q3UJ44; Q3TNN6; D3YU77; D3YZN3; Q99LB4 Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Capg PE=1 SV=1; Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=2 SV=1; Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=2 SV=1; Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Capg PE=1 SV=1; Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Capg PE=1 SV=1; Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=1 SV=1 1 3 3 0.566 0 1 1 1 544.66699 1631.98642 1631.98448 1.19 0.00065 0/0 0 0 22849352 HCD 30 MS2 42.91731 1227.5 73.215 59.4038 17066 17066 17061 QEplus033719.raw F4 1274.9 1188.1 1351.1 915 1452.3 1183.3 354 3.41 1 FALSE 0.0001187 0.003168 0.552 -250 77492 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQNDSAENETAEGEEK [R].mQNDSAENETAEGEEk.[R] N-Term(TMT6plex); K16(TMT6plex) 9 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; E9QA15; E9Q0M9; D3Z6I7; S4R1T7; E9Q9F3; Q7TMN5; E9QA16; Q3TUS1 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Cald1 protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1 0 3 3 0.8742 0 1 1 1 747.35132 2240.0394 2240.03889 0.23 0.00017 0/0 0 0 16011023 HCD 30 MS2 0 434.6 110 59.4063 17067 17067 17061 QEplus033719.raw F4 435.6 424.2 454.6 250.6 682.3 360.1 61 6.12 1 FALSE 1.14E-05 5.60E-13 2.425 -250 77498 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTGLHK [K].vTGLHk.[V] N-Term(TMT6plex); K6(TMT6plex) 1 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 0 3 3 0.1496 0 1 1 1 371.57816 1112.71991 1112.7192 0.64 0.00024 0/0 0 0 17116844 HCD 30 MS2 54.51057 651.6 47.264 59.4086 17068 17068 17061 QEplus033719.raw F4 733.8 495.9 667.5 464.3 742.9 805.4 107 2.34 1 FALSE 0.001576 0.02401 0.251 -250 77513 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGTDQELAK [K].eGTDQELAk.[L] N-Term(TMT6plex); K9(TMT6plex) 2 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 E9Q7G0; A0A1B0GSW3 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1; Nuclear mitotic apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 0 2 2 0.4763 0 1 1 1 724.90466 1448.80205 1448.79969 1.63 0.00118 0/0 0 0 9761223 HCD 30 MS2 0 647.2 110 59.4134 17070 17070 17061 QEplus033719.raw F4 603.5 748.4 715.2 413.2 842.7 560.2 446 3.38 1 FALSE 1.14E-05 1.97E-06 1.181 -250 77523 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIPHLVTHDAR [K].gIPHLVTHDAR.[T] N-Term(TMT6plex) 5 P62702 "40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2" V9GWY0; Q545F8; P62702; Q3V1Z5; Q3UXQ6 "40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Gm15013 PE=3 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1; 40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4l PE=2 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1" 0 4 4 0.7326 0 1 1 1 361.96133 1444.82351 1444.82221 0.9 0.00032 0/0 0 0 181150720 HCD 30 MS2 3.98033 89.9 5.454 59.4232 17073 17073 17072 QEplus033719.raw F4 87.6 66.8 112.7 80.2 86.6 105.5 395 5.16 1 FALSE 1.14E-05 7.72E-10 1.828 -250 77531 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSNAMEYK [K].qSNAMEYk.[K] N-Term(TMT6plex); K8(TMT6plex) 2 Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 Q3TXE5; Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 0 2 2 0.6447 0 1 1 1 714.88202 1428.75676 1428.75572 0.73 0.00052 0/0 0 0 11531190 HCD 30 MS2 21.2168 811.9 110 59.4257 17074 17074 17072 QEplus033719.raw F4 741.1 697.4 911.8 761.1 761.2 998.6 255 3.49 1 FALSE 1.14E-05 0.0001207 0.841 -250 77537 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVEEFK [K].rVEEFk.[L] N-Term(TMT6plex); K6(TMT6plex) 8 O88844 Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2 Q3TJ51; Q0QER9; O88844; Q5HZJ8; A0A087WPT4; A0A087WRS9; D3YVY3; Q8C338 Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; IDP (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1 1 3 3 0.094 0 1 1 1 422.59256 1265.76313 1265.76179 1.05 0.00044 0/0 0 0 214873152 HCD 30 MS2 20.21627 640.3 5.272 59.4279 17075 17075 17072 QEplus033719.raw F4 651.2 603.4 686.9 468.7 797.9 633.5 340 2.34 1 FALSE 0.006267 0.1016 0.002 -250 77563 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTVDIEEK [K].hTVDIEEk.[G] N-Term(TMT6plex); K8(TMT6plex) 7 Q9Z2Q6 Septin-5 OS=Mus musculus OX=10090 GN=Septin5 PE=1 SV=2 Q9Z2Q6; A0A338P769; A0A338P6R8; A0A338P755; B7ZNM7; A0A338P729; Q52KH2 Septin-5 OS=Mus musculus OX=10090 GN=Septin5 PE=1 SV=2; Septin OS=Mus musculus OX=10090 GN=Septin5 PE=1 SV=1; Septin OS=Mus musculus OX=10090 GN=Gm49601 PE=3 SV=1; Septin-5 (Fragment) OS=Mus musculus OX=10090 GN=Septin5 PE=4 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin5 PE=1 SV=1; Septin-5 OS=Mus musculus OX=10090 GN=Septin5 PE=1 SV=1; Septin-5 (Fragment) OS=Mus musculus OX=10090 GN=Septin5 PE=2 SV=1 0 3 3 0.6704 0 1 1 1 476.94159 1428.81021 1428.80987 0.24 0.00012 0/0 0 0 19765834 HCD 30 MS2 39.1749 1065.3 75.514 59.437 17079 17079 17072 QEplus033719.raw F4 1189.1 872.3 1114.5 1081.9 1059.1 1075 359 3.55 1 FALSE 6.52E-05 0.002708 0.569 -250 77567 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLLVNNNR [K].tLLVNNNR.[I] N-Term(TMT6plex) 4 P57784 U2 small nuclear ribonucleoprotein A' OS=Mus musculus OX=10090 GN=Snrpa1 PE=1 SV=2 P57784; Q8BSH5; G5E883; A0A0U1RNZ6 U2 small nuclear ribonucleoprotein A' OS=Mus musculus OX=10090 GN=Snrpa1 PE=1 SV=2; LRRcap domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; U2 small nuclear ribonucleoprotein A' OS=Mus musculus OX=10090 GN=Snrpa1 PE=1 SV=1; Predicted gene 45213 (Fragment) OS=Mus musculus OX=10090 GN=Gm45213 PE=4 SV=1 0 2 2 0.4569 0 1 1 1 586.85193 1172.69658 1172.69489 1.44 0.00085 0/0 0 0 17975376 HCD 30 MS2 28.18225 1211 110 59.4395 17080 17080 17072 QEplus033719.raw F4 1230.2 1072.4 1295.6 963.9 1495 1209.1 361 2.67 1 FALSE 0.0006216 0.009279 0.416 -250 77594 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTGSPGSPSAGGVQSTAK [K].kTGSPGSPSAGGVQSTAk.[K] N-Term(TMT6plex); K1(TMT6plex); K18(TMT6plex) 3 Q6PDL0 Cytoplasmic dynein 1 light intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1li2 PE=1 SV=2 A0A1D5RM94; A0A1D5RMC1; Q6PDL0 Dynein light intermediate chain OS=Mus musculus OX=10090 GN=Dync1li2 PE=1 SV=1; Dynein light intermediate chain (Fragment) OS=Mus musculus OX=10090 GN=Dync1li2 PE=1 SV=1; Cytoplasmic dynein 1 light intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1li2 PE=1 SV=2 1 3 3 0.7266 0 1 1 1 768.77722 2304.31711 2304.31263 1.94 0.00149 0/0 0 0 8561386 HCD 30 MS2 45.52843 451 110 59.4543 17085 17085 17083 QEplus033719.raw F4 453.1 412.4 509.6 319.7 587.1 424 465 6.4 1 FALSE 1.14E-05 6.31E-16 3.283 -250 77600 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RRQEQIQAVPIANCQAAR [K].rRQEQIQAVPIANcQAAR.[E] N-Term(TMT6plex); C14(Carbamidomethyl) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 2 4 4 0.7381 0 1 1 1 585.32123 2338.26308 2338.27235 -3.96 -0.00232 0/0 0 0 13112596 HCD 30 MS2 24.77392 563.5 77.48 59.4566 17086 17086 17083 QEplus033719.raw F4 545.7 456.8 615.4 509.5 711.3 542.1 475 5.69 2 FALSE 1.14E-05 2.38E-11 2.115 -250 77606 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPDSGISSIR [R].qPDSGISSIR.[S] N-Term(TMT6plex) 4 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q91YQ5; Q5RKP4; Q3U900; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 0 2 2 0.4968 0 1 1 1 644.85724 1288.7072 1288.70585 1.05 0.00068 0/0 0 0 22742680 HCD 30 MS2 12.4139 857.2 83.317 59.4588 17087 17087 17083 QEplus033719.raw F4 861.7 731.7 899.8 758.4 956.1 935.4 333 3.14 1 FALSE 1.14E-05 2.42E-05 0.975 -250 77619 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESALSPGEDVQR [K].eSALSPGEDVQR.[G] N-Term(TMT6plex) 3 Q61398 Procollagen C-endopeptidase enhancer 1 OS=Mus musculus OX=10090 GN=Pcolce PE=1 SV=2 Q3UN82; Q61398; D3YUE2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pcolce PE=2 SV=1; Procollagen C-endopeptidase enhancer 1 OS=Mus musculus OX=10090 GN=Pcolce PE=1 SV=2; Procollagen C-endopeptidase enhancer 1 OS=Mus musculus OX=10090 GN=Pcolce PE=1 SV=1 0 2 2 0.6771 0 1 1 1 758.8941 1516.78093 1516.78047 0.31 0.00023 0/0 0 0 13714875 HCD 30 MS2 8.049406 409.7 110 59.4636 17089 17089 17083 QEplus033719.raw F4 372.3 395.2 477.7 396.2 426.6 390 220 3.84 1 FALSE 1.14E-05 2.07E-11 2.127 -250 77625 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KMDESEANEAPAGEAAAR [K].kMDESEANEAPAGEAAAR.[E] N-Term(TMT6plex); K1(TMT6plex) 6 E9Q0A7 Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=1 Q4KMM3-2; Q4KMM3-4; Q4KMM3-3; E9Q0A7; A0A2R8W6N3; Q4KMM3 Isoform 2 of Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1; Isoform 4 of Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1; Isoform 3 of Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1; Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=1; Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=1; Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=3 1 3 3 0.2194 0 1 1 1 769.05682 2305.15592 2305.14944 2.81 0.00216 0/0 0 0 7095489 HCD 30 MS2 38.23473 536.9 110 59.4662 17090 17090 17083 QEplus033719.raw F4 551.5 471.1 599.5 365 750.6 483.7 249 4.65 1 FALSE 1.14E-05 6.93E-14 2.597 -250 77632 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEAGIR [R].kLEAGIR.[G] N-Term(TMT6plex); K1(TMT6plex) 6 E9QNN1 DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1 O70133-2; Q3UR42; O70133-3; E9QNN1; A0A087WPL5; O70133 Isoform 2 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; DEAH box protein 9 (Fragment) OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; Isoform 3 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=2 1 2 2 0.1264 0 1 1 1 622.91034 1244.8134 1244.80908 3.47 0.00216 0/0 0 0 8185285 HCD 30 MS2 0 655.5 110 59.4687 17091 17091 17083 QEplus033719.raw F4 656.7 605.2 705.5 528 791.6 646.3 357 1.82 1 FALSE 0.007222 0.1146 -0.031 -250 77666 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAAYGGK [K].vAAYGGk.[L] N-Term(TMT6plex); K7(TMT6plex) 5 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 A0A571BD72; B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein (Fragment) OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.1264 0 1 1 1 562.34833 1123.68938 1123.68757 1.61 0.00091 0/0 0 0 35117228 HCD 30 MS2 39.41508 1328.1 29.624 59.4855 17097 17097 17094 QEplus033719.raw F4 1223.5 1166.2 1607.7 1313.1 1362.7 1295.6 117 2.69 2 FALSE 0.001946 0.03359 0.2 -250 77682 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESALSPGEDVQR [K].eSALSPGEDVQR.[G] N-Term(TMT6plex) 3 Q61398 Procollagen C-endopeptidase enhancer 1 OS=Mus musculus OX=10090 GN=Pcolce PE=1 SV=2 Q3UN82; Q61398; D3YUE2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pcolce PE=2 SV=1; Procollagen C-endopeptidase enhancer 1 OS=Mus musculus OX=10090 GN=Pcolce PE=1 SV=2; Procollagen C-endopeptidase enhancer 1 OS=Mus musculus OX=10090 GN=Pcolce PE=1 SV=1 0 3 3 0.7348 0 1 1 1 506.26553 1516.78205 1516.78047 1.04 0.00053 0/0 0 0 9047714 HCD 30 MS2 46.35247 1027.3 110 59.4905 17099 17099 17094 QEplus033719.raw F4 1460 576.9 995.1 1141.9 898 1091.7 227 3.62 1 FALSE 1.14E-05 0.0002461 0.782 -250 77688 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDDANDAGGK [K].lDDANDAGGk.[H] N-Term(TMT6plex); K10(TMT6plex) 3 Q64511 DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2 Q3TR62; Q8BRY5; Q64511 DNA topoisomerase 2 (Fragment) OS=Mus musculus OX=10090 GN=Top2b PE=2 SV=1; DNA topoisomerase 2 (Fragment) OS=Mus musculus OX=10090 GN=Top2b PE=2 SV=1; DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2 0 2 2 0.4158 0 1 1 1 717.38672 1433.76616 1433.76364 1.76 0.00126 0/0 0 0 8455381 HCD 30 MS2 0 686 110 59.493 17100 17100 17094 QEplus033719.raw F4 653.6 583.4 720 554.7 937.3 667 314 4.04 1 FALSE 1.14E-05 4.44E-08 1.494 -250 77729 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAVVGRPPADK [R].dAVVGRPPADk.[K] N-Term(TMT6plex); K11(TMT6plex) 3 Q91YH5 Atlastin-3 OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1 Q91YH5; Q91YH5-2; E9PYT3 Atlastin-3 OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1; Isoform 2 of Atlastin-3 OS=Mus musculus OX=10090 GN=Atl3; Atlastin-3 OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1 0 3 3 0.5719 0 1 1 1 528.31555 1582.9321 1582.93171 0.25 0.00013 0/0 0 0 12841982 HCD 30 MS2 40.264 1057.6 110 59.5121 17107 17107 17105 QEplus033719.raw F4 1025.3 881 1165.7 887.4 1243.4 1142.6 345 3.13 1 FALSE 1.14E-05 1.12E-05 1.038 -250 77739 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISCTIANR [R].iScTIANR.[C] N-Term(TMT6plex); C3(Carbamidomethyl) 12 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; B9EHT6; A0A087WR50; Q3UGY5; Q4KL80; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.3167 0 1 1 1 582.32397 1163.64067 1163.64041 0.23 0.00013 0/0 0 0 387443296 HCD 30 MS2 21.29616 624.9 3.344 59.5144 17108 17108 17105 QEplus033719.raw F4 569 599.3 747.4 683.1 477.4 672.9 327 2.81 3 FALSE 0.0003211 0.006244 0.473 -250 77749 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEAAMFHR [R].eAEAAMFHR.[L] N-Term(TMT6plex) 1 P52480-2 Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480-2 Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm 0 3 3 0.6774 0 1 1 1 430.88724 1290.64716 1290.64622 0.73 0.00031 0/0 0 0 88707440 HCD 30 MS2 18.76351 292.8 14.919 59.5166 17109 17109 17105 QEplus033719.raw F4 360.4 173.6 203.3 311.8 389.4 318.6 108 4.34 1 FALSE 1.14E-05 2.22E-07 1.361 -250 77754 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEAGLNR [R].lEAGLNR.[V] N-Term(TMT6plex) 2 Q80SZ7 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Mus musculus OX=10090 GN=Gng5 PE=1 SV=2 Q80SZ7; A0A3B2WD42 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Mus musculus OX=10090 GN=Gng5 PE=1 SV=2; Guanine nucleotide-binding protein subunit gamma OS=Mus musculus OX=10090 GN=Gm4356 PE=3 SV=1 0 2 2 0.1992 0 1 1 1 501.30093 1001.59459 1001.59411 0.48 0.00024 0/0 0 0 38750080 HCD 30 MS2 8.9594 1021.2 41.048 59.5212 17111 17111 17105 QEplus033719.raw F4 1114.5 914.9 1162.7 856.6 1015 1063.4 190 2.36 1 FALSE 0.0003996 0.007086 0.456 -250 77770 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPTGLFEGQR [R].rPTGLFEGQR.[N] N-Term(TMT6plex) 1 Q8BZF8 Phosphoglucomutase-like protein 5 OS=Mus musculus OX=10090 GN=Pgm5 PE=1 SV=2 Q8BZF8 Phosphoglucomutase-like protein 5 OS=Mus musculus OX=10090 GN=Pgm5 PE=1 SV=2 0 3 3 0.6721 0 1 1 1 463.93219 1389.78202 1389.78001 1.44 0.00067 0/0 0 0 14453789 HCD 30 MS2 25.50818 746.1 72.202 59.5257 17113 17113 17105 QEplus033719.raw F4 811.6 417.5 750.3 789.1 566.3 1142 428 4.3 1 FALSE 1.14E-05 4.07E-05 0.931 -250 77804 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVYAAEK [K].sVYAAEk.[V] N-Term(TMT6plex); K7(TMT6plex) 1 Q545C7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csrp3 PE=1 SV=1 Q545C7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csrp3 PE=1 SV=1 0 2 2 0.4063 0 1 1 1 613.36407 1225.72087 1225.71926 1.32 0.00081 0/0 0 0 4789172.5 HCD 30 MS2 36.95304 878.6 110 59.5405 17118 17118 17116 QEplus033719.raw F4 1110.2 561.8 819.8 1060 740.3 979.6 297 1.92 1 FALSE 0.001177 0.01582 0.323 -250 77812 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDIDIR [K].cDIDIR.[K] N-Term(TMT6plex); C1(Carbamidomethyl) 12 Q3UIJ3; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q3TG92; P63268; Q3UIJ3; Q9CXK3; Q61275; Q3U122; Q61272; P62737; P68134; P68033; Q61852; Q61264 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1" 0 2 2 0.1991 0 1 1 1 510.77164 1020.536 1020.53455 1.42 0.00073 0/0 0 0 161947984 HCD 30 MS2 34.09875 756.7 6.679 59.5428 17119 17119 17116 QEplus033719.raw F4 797.7 367.2 691.8 762.4 968.5 952.4 244 2.11 3 FALSE 0.006667 0.1056 -0.009 -250 77827 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVEKPPK [R].tVEkPPk.[F] N-Term(TMT6plex); K4(TMT6plex); K7(TMT6plex) 12 Q62261; Q3UGY4; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Spectrin beta chain OS=Mus musculus OX=10090 GN=Sptb PE=2 SV=1;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q62261; Q3TZN6; Q68FG2; Q3UGY4; Q3UGZ4; P15508; A0A0A0MQG2; Q5DTR4; E9Q397; B2RX08; Q3UGX2; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Spectrin beta chain OS=Mus musculus OX=10090 GN=Sptbn2 PE=1 SV=1; Spectrin beta chain OS=Mus musculus OX=10090 GN=Sptb PE=2 SV=1; Spectrin beta chain OS=Mus musculus OX=10090 GN=Sptbn2 PE=2 SV=1; Spectrin beta chain, erythrocytic OS=Mus musculus OX=10090 GN=Sptb PE=1 SV=4; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; MKIAA4049 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Spectrin beta chain OS=Mus musculus OX=10090 GN=Sptb PE=1 SV=1; Spectrin beta chain OS=Mus musculus OX=10090 GN=Sptb PE=2 SV=1; Spectrin beta chain OS=Mus musculus OX=10090 GN=Sptb PE=1 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 3 3 0.2467 0 1 1 1 495.99213 1485.96183 1485.96078 0.71 0.00035 0/0 0 0 21308100 HCD 30 MS2 54.48426 1178 36.866 59.5473 17121 17121 17116 QEplus033719.raw F4 1420.8 840.3 1338.3 1142.5 1107.6 1218.4 239 1.5 3 FALSE 0.004483 0.08007 0.061 -250 77836 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYGQGLSEGR [K].vYGQGLSEGR.[T] N-Term(TMT6plex) 1 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 0 2 2 0.5398 0 1 1 1 647.85364 1294.7 1294.69528 3.64 0.00236 0/0 0 0 19951048 HCD 30 MS2 37.3372 1300 87.938 59.5496 17122 17122 17116 QEplus033719.raw F4 1309.3 1167 1296.7 1121.8 1540.1 1364.9 312 3.39 1 FALSE 1.14E-05 5.07E-07 1.293 -250 77853 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YTSQIVGR [K].yTSQIVGR.[F] N-Term(TMT6plex) 3 Q3UQL2 COP9 signalosome complex subunit 3 OS=Mus musculus OX=10090 GN=Cops3 PE=1 SV=1 Q3UQL2; Q8BX58; F6YCA7 COP9 signalosome complex subunit 3 OS=Mus musculus OX=10090 GN=Cops3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; COP9 signalosome complex subunit 3 (Fragment) OS=Mus musculus OX=10090 GN=Cops3 PE=1 SV=1 0 2 2 0.4345 0 1 1 1 576.83191 1152.65654 1152.65744 -0.78 -0.00045 0/0 0 0 9874076 HCD 30 MS2 40.40603 1079.4 110 59.5566 17125 17125 17116 QEplus033719.raw F4 1108.5 916.1 1135.1 870.8 1361 1084.9 172 1.68 1 FALSE 0.008895 0.1588 -0.097 -250 77861 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TFYSCTTEGR [R].tFYScTTEGR.[Q] N-Term(TMT6plex); C5(Carbamidomethyl) 12 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.7291 0 1 1 1 725.8465 1450.68572 1450.6834 1.6 0.00116 0/0 0 0 9637083 HCD 30 MS2 0 814.1 110 59.5591 17126 17126 17116 QEplus033719.raw F4 791.1 710.6 980.3 935.9 655.5 811.4 68 4.06 3 FALSE 1.14E-05 1.01E-06 1.237 -250 77866 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIPHLVTHDAR [K].gIPHLVTHDAR.[T] N-Term(TMT6plex) 5 P62702 "40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2" V9GWY0; Q545F8; P62702; Q3V1Z5; Q3UXQ6 "40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Gm15013 PE=3 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1; 40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4l PE=2 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1" 0 3 3 0.7587 0 1 1 1 482.27896 1444.82233 1444.82221 0.08 0.00004 0/0 0 0 45480656 HCD 30 MS2 30.72512 421.3 26.475 59.5664 17128 17128 17127 QEplus033719.raw F4 595.1 289.5 426.7 356.1 439.3 421.3 391 4.89 1 FALSE 1.14E-05 7.85E-10 1.827 -250 77874 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDAAPTPVPQSAPR [R].sDAAPTPVPQSAPR.[N] N-Term(TMT6plex) 2 Q8BJW6 Eukaryotic translation initiation factor 2A OS=Mus musculus OX=10090 GN=Eif2a PE=1 SV=2 Q8BJW6-2; Q8BJW6 Isoform 2 of Eukaryotic translation initiation factor 2A OS=Mus musculus OX=10090 GN=Eif2a; Eukaryotic translation initiation factor 2A OS=Mus musculus OX=10090 GN=Eif2a PE=1 SV=2 0 2 2 0.7175 0 1 1 1 811.93976 1622.87224 1622.86995 1.41 0.00114 0/0 0 0 6071632 HCD 30 MS2 0 230.4 110 59.5689 17129 17129 17127 QEplus033719.raw F4 226.4 199.6 256.4 183.1 249.2 267.7 418 4 1 FALSE 1.14E-05 3.79E-10 1.887 -250 77881 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQHEDQVEQYKK [R].aQHEDQVEQYkk.[E] N-Term(TMT6plex); K11(TMT6plex); K12(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 1 4 4 0.7818 0 1 1 1 548.30878 2190.21328 2190.21219 0.5 0.00027 0/0 0 0 30053392 HCD 30 MS2 9.487885 1029.9 50.135 59.5712 17130 17130 17127 QEplus033719.raw F4 1218.9 954.6 1092.1 860.1 1176.5 877.3 424 6.05 1 FALSE 1.14E-05 1.45E-09 1.776 -250 77889 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAAYGGK [K].vAAYGGk.[L] N-Term(TMT6plex); K7(TMT6plex) 5 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 A0A571BD72; B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein (Fragment) OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.0884 0 1 1 1 562.3515 1123.69573 1123.68757 7.26 0.00408 0/0 0 0 16566353 HCD 30 MS2 44.5583 1848.9 58.461 59.5757 17132 17132 17127 QEplus033719.raw F4 1833.1 1632.3 2050.2 1574.2 2246.3 1757.5 97 2.15 2 FALSE 0.006477 0.1039 -0.004 -250 77912 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAENFDK [K].gAENFDk.[F] N-Term(TMT6plex); K7(TMT6plex) 3 Q4VA93 Protein kinase C OS=Mus musculus OX=10090 GN=Prkca PE=1 SV=1 Q3TQ39; P20444; Q4VA93 Protein kinase C alpha type OS=Mus musculus OX=10090 GN=Prkca PE=1 SV=1; Protein kinase C alpha type OS=Mus musculus OX=10090 GN=Prkca PE=1 SV=3; Protein kinase C OS=Mus musculus OX=10090 GN=Prkca PE=1 SV=1 0 2 2 0.4327 0 1 1 1 619.84326 1238.67925 1238.67812 0.91 0.00056 0/0 0 0 10501628 HCD 30 MS2 22.43965 1134.7 110 59.583 17135 17135 17127 QEplus033719.raw F4 1207.3 1048.2 1136.1 871.4 1478.3 1066.7 302 2.45 1 FALSE 0.001257 0.01713 0.308 -250 77920 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEYLSNADER [R].tEYLSNADER.[L] N-Term(TMT6plex) 2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q80U36; Q9JHU4 MKIAA0325 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 2 2 0.7887 0 1 1 1 713.85504 1426.70281 1426.70115 1.16 0.00083 0/0 0 0 9480849 HCD 30 MS2 10.46319 581.5 110 59.5855 17136 17136 17127 QEplus033719.raw F4 566 488.1 648.5 533.5 607.5 645.6 96 3.88 1 FALSE 1.14E-05 3.66E-08 1.51 -250 77924 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDLGPCEK [R].sDLGPcEk.[I] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 3 Q5SUF2 Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1 Q5SUF2-2; Q5SUF2-3; Q5SUF2 Isoform 2 of Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3; Isoform 3 of Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3; Luc7-like protein 3 OS=Mus musculus OX=10090 GN=Luc7l3 PE=1 SV=1 0 2 2 0.6398 0 1 1 1 682.36737 1363.72746 1363.72917 -1.25 -0.00085 0/0 0 0 8231161.5 HCD 30 MS2 15.79141 988.9 110 59.588 17137 17137 17127 QEplus033719.raw F4 1005.4 957.3 1060.9 780.4 1258.3 871.3 298 3.22 1 FALSE 0.0002218 0.004636 0.51 -250 77930 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALLQHK [K].aLLQHk.[N] N-Term(TMT6plex); K6(TMT6plex) 5 P70336 Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1 Q3UMT5; P70336; A0A1Y7VMN0; P70336-2; F8VPK5 Rho-associated protein kinase 2 (Fragment) OS=Mus musculus OX=10090 GN=Rock2 PE=2 SV=1; Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1; Rho-associated protein kinase 2 (Fragment) OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1; Isoform 2 of Rho-associated protein kinase 2 OS=Mus musculus OX=10090 GN=Rock2; Rho-associated protein kinase OS=Mus musculus OX=10090 GN=Rock2 PE=1 SV=1 0 3 3 0.2 0 1 1 1 389.92548 1167.76187 1167.7614 0.41 0.00016 0/0 0 0 6947423.5 HCD 30 MS2 57.73927 648 110 59.5953 17139 17139 17138 QEplus033719.raw F4 663.2 487.3 696.2 599.5 709.7 731.8 71 2.7 1 FALSE 0.001877 0.03177 0.208 -250 77955 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTEAPAAAGPEAK [K].kTEAPAAAGPEAk.[S] N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 1 3 3 0.7892 0 1 1 1 643.38586 1928.14304 1928.14199 0.55 0.00035 0/0 0 0 45527528 HCD 30 MS2 3.251857 709.6 42.846 59.6046 17143 17143 17138 QEplus033719.raw F4 729.2 746.1 815.7 509.4 770.9 686.6 373 6.88 1 FALSE 1.14E-05 6.31E-16 3.467 -250 77981 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQHEDQVEQYKK [R].aQHEDQVEQYkk.[E] N-Term(TMT6plex); K11(TMT6plex); K12(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 1 3 3 0.8017 0 1 1 1 730.74219 2190.21201 2190.21219 -0.08 -0.00006 0/0 0 0 6044720.5 HCD 30 MS2 0 636.4 110 59.6116 17146 17146 17138 QEplus033719.raw F4 739.6 604.9 670.4 486.3 795.4 521.8 422 5.85 1 FALSE 1.14E-05 6.31E-16 3.482 -250 77996 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADAGEYSCEAGGQK [K].aDAGEYScEAGGQk.[L] N-Term(TMT6plex); C8(Carbamidomethyl); K14(TMT6plex) 5 A0A1W2P6H1 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2 A0A1W2P6H1; H7BX05; A2AAJ9; E9QQ96; Z4YJE4 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Obscurin OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3 0 2 2 0.8221 0 1 1 1 950.9588 1900.91033 1900.91111 -0.41 -0.00039 0/0 0 0 6783540.5 HCD 30 MS2 0 471.1 110 59.6167 17148 17148 17138 QEplus033719.raw F4 556.4 95.7 425.9 909.3 96.5 742.9 100 5.79 1 FALSE 1.14E-05 5.86E-15 2.801 -250 78033 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QFAEGSTEK [R].qFAEGSTEk.[L] N-Term(TMT6plex); K9(TMT6plex) 2 Q8CGY6 Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b PE=1 SV=1 Q8CGY6; Q8CGY6-2 Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b PE=1 SV=1; Isoform 2 of Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b 0 2 2 0.4983 0 1 1 1 727.89795 1454.78862 1454.78913 -0.35 -0.00025 0/0 0 0 14028421 HCD 30 MS2 37.4623 943.6 110 59.6358 17155 17155 17149 QEplus033719.raw F4 976.6 420.7 1127 1278.1 382.6 1476.7 321 3.01 1 FALSE 0.001134 0.01507 0.332 -250 78043 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAASGEEIGK [R].dAASGEEIGk.[F] N-Term(TMT6plex); K10(TMT6plex) 2 A0A0R4IZY0 Thimet oligopeptidase OS=Mus musculus OX=10090 GN=Thop1 PE=1 SV=1 A0A0R4IZY0; Q8C1A5 Thimet oligopeptidase OS=Mus musculus OX=10090 GN=Thop1 PE=1 SV=1; Thimet oligopeptidase OS=Mus musculus OX=10090 GN=Thop1 PE=1 SV=1 0 2 2 0.6135 0 1 1 1 717.89581 1434.78435 1434.78404 0.21 0.00015 0/0 0 0 12725166 HCD 30 MS2 11.35113 808.8 110 59.6383 17156 17156 17149 QEplus033719.raw F4 922.1 487.1 889.2 886.7 628.9 1038.5 375 4.01 1 FALSE 1.14E-05 5.47E-08 1.477 -250 78051 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELTDTCK [K].eLTDTck.[E] N-Term(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex) 5 P97496 SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=2 P97496; Q3UPK0; P97496-2; Q3UMX0; Q3UNN4 SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Smarcc1 PE=2 SV=1; Isoform 2 of SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Smarcc1 PE=2 SV=1; SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=1 0 2 2 0.5766 0 1 1 1 662.86243 1324.71758 1324.71827 -0.53 -0.00035 0/0 0 0 5405435.5 HCD 30 MS2 0 675 110 59.6408 17157 17157 17149 QEplus033719.raw F4 669.6 649.1 671.2 522.6 921.5 615.8 321 2.74 1 FALSE 0.0006477 0.00997 0.405 -250 78070 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAPAVTPGK [K].gAPAVTPGk.[A] N-Term(TMT6plex); K9(TMT6plex) 7 O08784 Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 H3BIX0; Q05BH6; F6R3V4; O08784; Q7TPZ2; Q6PFZ6; H3BL37 Treacle protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Tcof1 protein OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 0 2 2 0.0765 0 1 1 1 628.39258 1255.77788 1255.77744 0.35 0.00022 0/0 0 0 14810162 HCD 30 MS2 0 1152 110 59.6529 17161 17161 17160 QEplus033719.raw F4 1191.3 1037.3 1228.9 833.2 1413.2 1208.1 215 1.96 1 FALSE 1.14E-05 0.0009027 0.671 -250 78096 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLEANTHVK [K].tLEANTHVk.[H] N-Term(TMT6plex); K9(TMT6plex) 3 Q9JHJ0 Tropomodulin-3 OS=Mus musculus OX=10090 GN=Tmod3 PE=1 SV=1 Q9JHJ0; Q3TFA9; Q8C3Z3 Tropomodulin-3 OS=Mus musculus OX=10090 GN=Tmod3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmod3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tmod3 PE=2 SV=1 0 3 3 0.4872 0 1 1 1 490.96121 1470.86908 1470.86805 0.7 0.00034 0/0 0 0 29592770 HCD 30 MS2 28.55929 1057 52.293 59.6622 17165 17165 17160 QEplus033719.raw F4 1351.4 876.7 1020.3 869.3 1234.9 989.1 370 3.9 1 FALSE 1.14E-05 0.0002364 0.785 -250 78100 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAWAVR [K].dAWAVR.[H] N-Term(TMT6plex) 1 P05202 "Aspartate aminotransferase, mitochondrial OS=Mus musculus OX=10090 GN=Got2 PE=1 SV=1" P05202 "Aspartate aminotransferase, mitochondrial OS=Mus musculus OX=10090 GN=Got2 PE=1 SV=1" 0 2 2 0.2672 0 1 1 1 473.76941 946.53154 946.53078 0.8 0.00038 0/0 0 0 27762988 HCD 30 MS2 48.88691 763 25.556 59.6645 17166 17166 17160 QEplus033719.raw F4 755.8 654.9 859.1 695.6 744.9 867.8 194 2.47 1 FALSE 0.003295 0.06398 0.103 -250 78115 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCVTPVK [KR].gcVTPVk.[N] N-Term(TMT6plex); C2(Carbamidomethyl); K7(TMT6plex) 11 Q3UWH6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ctsl PE=2 SV=1 A0A1Y7VNM3; Q3UWH6; Q3U5U9; Q3UHZ4; Q9D0C0; Q9JI81; A0A1Y7VNQ4; Q3TNC8; Q3TT75; P06797; Q3TVJ1 Procathepsin L (Fragment) OS=Mus musculus OX=10090 GN=Ctsl PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ctsl PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctsl PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctsl PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctsl PE=2 SV=1; Cathepsin 8 OS=Mus musculus OX=10090 GN=Cts8 PE=2 SV=1; Procathepsin L (Fragment) OS=Mus musculus OX=10090 GN=Ctsl PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctsl PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctsl PE=2 SV=1; Procathepsin L OS=Mus musculus OX=10090 GN=Ctsl PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctsl PE=2 SV=1 0 2 2 0.504 0 1 1 1 609.86743 1218.72759 1218.72805 -0.38 -0.00023 0/0 0 0 26858676 HCD 30 MS2 21.79045 1178.4 36.421 59.669 17168 17168 17160 QEplus033719.raw F4 1228.3 1051.4 1194.6 1239.4 1122.5 1234 576 2.52 1 FALSE 0.0006294 0.009535 0.412 -250 78123 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTEAPAAAGPEAK [K].kTEAPAAAGPEAk.[S] N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 1 4 4 0.6748 0 1 1 1 482.79135 1928.14358 1928.14199 0.82 0.0004 0/0 0 0 26597834 HCD 30 MS2 44.1805 452.4 32.886 59.6712 17169 17169 17160 QEplus033719.raw F4 473.6 404.8 514.9 350.6 497.5 472.8 358 5.32 1 FALSE 1.14E-05 8.26E-09 1.633 -250 78137 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYHIDEK [K].eYHIDEk.[N] N-Term(TMT6plex); K7(TMT6plex) 4 Q3TN85 UV excision repair protein RAD23 homolog A (Fragment) OS=Mus musculus OX=10090 GN=Rad23a PE=1 SV=1 Q8BRA9; Q3TN85; P54726; Q8CAP3 Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; UV excision repair protein RAD23 homolog A (Fragment) OS=Mus musculus OX=10090 GN=Rad23a PE=1 SV=1; UV excision repair protein RAD23 homolog A OS=Mus musculus OX=10090 GN=Rad23a PE=1 SV=2; UV excision repair protein RAD23 OS=Mus musculus OX=10090 GN=Rad23a PE=1 SV=1 0 3 3 0.4968 0 1 1 1 464.59042 1391.75672 1391.7571 -0.28 -0.00013 0/0 0 0 11750525 HCD 30 MS2 26.61182 596.2 68.261 59.681 17172 17172 17171 QEplus033719.raw F4 597.1 405.9 644.8 588.2 561.4 779.9 351 3.16 1 FALSE 0.003015 0.05895 0.117 -250 78143 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQSCYEK [K].mQScYEk.[M] N-Term(TMT6plex); C4(Carbamidomethyl); K7(TMT6plex) 1 Q8R1F1 Protein Niban 2 OS=Mus musculus OX=10090 GN=Niban2 PE=1 SV=2 Q8R1F1 Protein Niban 2 OS=Mus musculus OX=10090 GN=Niban2 PE=1 SV=2 0 2 2 0.6814 0 1 1 1 702.3573 1403.70732 1403.70633 0.71 0.0005 0/0 0 0 12254865 HCD 30 MS2 0 831.3 110 59.6836 17173 17173 17171 QEplus033719.raw F4 779.8 805.7 932.4 674.5 1024.5 771 135 3.17 1 FALSE 0.0006126 0.00912 0.419 -250 78147 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALEVEECR [R].aLEVEEcR.[C] N-Term(TMT6plex); C7(Carbamidomethyl) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.341 0 1 1 1 617.81903 1234.63078 1234.6299 0.71 0.00044 0/0 0 0 31048308 HCD 30 MS2 6.036874 1076.4 74.495 59.6858 17174 17174 17171 QEplus033719.raw F4 1072.4 1020.2 1370.8 1042.1 863.1 1089.8 182 3.05 2 FALSE 4.43E-05 0.001573 0.621 -250 78180 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETGEHLVHVK [K].eTGEHLVHVk.[K] N-Term(TMT6plex); K10(TMT6plex) 7 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; I7HPX4; B7FAV1; F6Z2C0; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=4 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=8; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 4 4 0.6841 0 1 1 1 402.48898 1606.9341 1606.93171 1.49 0.0006 0/0 0 0 5815063.5 HCD 30 MS2 17.74115 632.8 110 59.6999 17180 17180 17171 QEplus033719.raw F4 679.4 570.4 666.9 444.9 840.4 594.9 459 4.78 1 FALSE 1.14E-05 4.98E-10 1.865 -250 78185 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISCTIANR [R].iScTIANR.[C] N-Term(TMT6plex); C3(Carbamidomethyl) 12 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; B9EHT6; A0A087WR50; Q3UGY5; Q4KL80; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.359 0 1 1 1 388.55112 1163.6388 1163.64041 -1.38 -0.00054 0/0 0 0 4369429 HCD 30 MS2 46.26821 415.6 110 59.7024 17181 17181 17171 QEplus033719.raw F4 488.1 310 447.1 332.9 402.8 512.5 333 2.34 3 FALSE 0.002141 0.03997 0.175 -250 78215 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTNEWK [R].gTNEWk.[T] N-Term(TMT6plex); K6(TMT6plex) 2 P19783 "Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Mus musculus OX=10090 GN=Cox4i1 PE=1 SV=2" P19783; M0QWX7 "Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Mus musculus OX=10090 GN=Cox4i1 PE=1 SV=2; Cytochrome c oxidase subunit 4 (Fragment) OS=Mus musculus OX=10090 GN=Cox4i1 PE=1 SV=1" 0 2 2 0.0764 0 1 1 1 596.83978 1192.67229 1192.67264 -0.3 -0.00018 0/0 0 0 12618495 HCD 30 MS2 48.35522 1552.5 110 59.7192 17187 17187 17182 QEplus033719.raw F4 1409.6 1181.6 1642.8 1677.1 1463.5 1940.3 377 1.57 1 FALSE 0.007631 0.1253 -0.052 -250 78222 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TASAEEIK [R].tASAEEIk.[A] N-Term(TMT6plex); K8(TMT6plex) 1 P27612 Phospholipase A-2-activating protein OS=Mus musculus OX=10090 GN=Plaa PE=1 SV=4 P27612 Phospholipase A-2-activating protein OS=Mus musculus OX=10090 GN=Plaa PE=1 SV=4 0 2 2 0.4021 0 1 1 1 653.88477 1306.76225 1306.76185 0.31 0.0002 0/0 0 0 11328798 HCD 30 MS2 53.60571 1493.7 110 59.7217 17188 17188 17182 QEplus033719.raw F4 1548.8 1319.2 1611.6 1470.1 1546.7 1465.9 427 2.86 1 FALSE 1.14E-05 0.000257 0.778 -250 78230 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STSPPLK [R].sTSPPLk.[L] N-Term(TMT6plex); K7(TMT6plex) 1 Q8BIW1 Exopolyphosphatase PRUNE1 OS=Mus musculus OX=10090 GN=Prune1 PE=1 SV=1 Q8BIW1 Exopolyphosphatase PRUNE1 OS=Mus musculus OX=10090 GN=Prune1 PE=1 SV=1 0 2 2 0.1121 0 1 1 1 594.37286 1187.73845 1187.73999 -1.3 -0.00077 0/0 0 0 7526427.5 HCD 30 MS2 36.96239 969.6 110 59.7242 17189 17189 17182 QEplus033719.raw F4 1066.4 595.7 992.1 1086.1 807.1 1270.5 240 2.23 1 FALSE 0.006363 0.1028 -0.001 -250 78240 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQAALEK [K].eQAALEk.[L] N-Term(TMT6plex); K7(TMT6plex) 5 Q7TQK5 Coiled-coil domain-containing protein 93 OS=Mus musculus OX=10090 GN=Ccdc93 PE=1 SV=1 Q7TQK5; Q8R3S9; Q8BWK1; Q8BUE0; E9QAD4 Coiled-coil domain-containing protein 93 OS=Mus musculus OX=10090 GN=Ccdc93 PE=1 SV=1; Coiled-coil domain-containing protein 93 (Fragment) OS=Mus musculus OX=10090 GN=Ccdc93 PE=2 SV=1; Coiled-coil domain-containing protein 93 (Fragment) OS=Mus musculus OX=10090 GN=Ccdc93 PE=2 SV=1; Coiled-coil domain-containing protein 93 OS=Mus musculus OX=10090 GN=Ccdc93 PE=2 SV=1; Coiled-coil domain-containing protein 93 OS=Mus musculus OX=10090 GN=Ccdc93 PE=1 SV=1 0 2 2 0.3545 0 1 1 1 623.87518 1246.74309 1246.74072 1.9 0.00118 0/0 0 0 4878568 HCD 30 MS2 43.61824 897.3 110 59.7267 17190 17190 17182 QEplus033719.raw F4 906 777.9 885.8 742.6 1083 988.8 578 2.68 1 FALSE 0.0002518 0.005181 0.497 -250 78247 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTEAPAAAGPEAK [K].kTEAPAAAGPEAk.[S] N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 1 2 2 0.708 0 1 1 1 964.57556 1928.14385 1928.14199 0.96 0.00093 0/0 0 0 3538076.75 HCD 30 MS2 0 119.1 110 59.7293 17191 17191 17182 QEplus033719.raw F4 95.6 105.5 148.5 93.3 141.5 130.4 360 5.24 1 FALSE 1.14E-05 2.09E-12 2.316 -250 78252 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CQLLQQR [R].cQLLQQR.[E] N-Term(TMT6plex); C1(Carbamidomethyl) 2 Q99P31 Hsp70-binding protein 1 OS=Mus musculus OX=10090 GN=Hspbp1 PE=1 SV=1 Q99P31; A0A0U1RNL5 Hsp70-binding protein 1 OS=Mus musculus OX=10090 GN=Hspbp1 PE=1 SV=1; Hsp70-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hspbp1 PE=1 SV=1 0 2 2 0.1649 0 1 1 1 587.83167 1174.65605 1174.65639 -0.29 -0.00017 0/0 0 0 3334178.5 HCD 30 MS2 43.44681 770.6 110 59.7318 17192 17192 17182 QEplus033719.raw F4 828.7 536.8 690.1 531 1304 733.3 379 1.88 1 FALSE 0.0023 0.04576 0.155 -250 78259 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDSYTLHK [R].nDSYTLHk.[I] N-Term(TMT6plex); K8(TMT6plex) 4 A0A1S6GWH1 AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc5 PE=2 SV=1 A0A1S6GWH1; Q8K1K2; Q99KR1; P62196 AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc5 PE=2 SV=1; 26S proteasome regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmc5 PE=1 SV=1; Psmc5 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc5 PE=2 SV=1; 26S proteasome regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmc5 PE=1 SV=1 0 3 3 0.5655 0 1 1 1 479.26871 1435.79157 1435.79455 -2.08 -0.00099 0/0 0 0 24625682 HCD 30 MS2 34.16862 817.3 59.15 59.7413 17195 17195 17193 QEplus033719.raw F4 871.2 563.7 882.3 916 801 869.5 446 3.36 1 FALSE 0.0003113 0.006099 0.476 -250 78264 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEDGAAPSPSSETPK [K].aEDGAAPSPSSETPk.[K] N-Term(TMT6plex); K15(TMT6plex) 3 P26645 Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2 A0A0A1HAM8; P26645; Q05BL6 80K protein OS=Mus musculus OX=10090 GN=Marcks PE=2 SV=1; Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2; Marcks protein (Fragment) OS=Mus musculus OX=10090 GN=Marcks PE=2 SV=1 0 2 2 0.7956 0 1 1 1 951.50323 1901.99919 1901.98566 7.12 0.00677 0/0 0 0 5138134.5 HCD 30 MS2 25.53679 430.3 110 59.7439 17196 17196 17193 QEplus033719.raw F4 422.9 304.1 434.7 482.2 448.1 490 308 4.5 1 FALSE 1.14E-05 9.62E-13 2.38 -250 78269 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPDTFVR [K].sPDTFVR.[T] N-Term(TMT6plex) 1 Q99LC5 "Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Etfa PE=1 SV=2" Q99LC5 "Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Etfa PE=1 SV=2" 0 2 2 0.2924 0 1 1 1 525.79297 1050.57866 1050.57813 0.51 0.00027 0/0 0 0 45257824 HCD 30 MS2 39.34693 776.2 17.24 59.7461 17197 17197 17193 QEplus033719.raw F4 842.1 519.4 876.6 863.3 631.3 924.4 187 2.36 1 FALSE 0.003674 0.07045 0.086 -250 78301 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASDYGMK [R].aSDYGMk.[L] N-Term(TMT6plex); K7(TMT6plex) 1 Q6ZQI3 Malectin OS=Mus musculus OX=10090 GN=Mlec PE=1 SV=2 Q6ZQI3 Malectin OS=Mus musculus OX=10090 GN=Mlec PE=1 SV=2 0 2 2 0.4784 0 1 1 1 615.33398 1229.66069 1229.66003 0.54 0.00033 0/0 0 0 13637775 HCD 30 MS2 9.13826 1310.1 110 59.7557 17201 17201 17193 QEplus033719.raw F4 1194.5 1112.1 1381.1 1409.8 1345.5 1417.8 212 2.55 1 FALSE 0.0005076 0.007862 0.442 -250 78314 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLTSHK [K].lLTSHk.[R] N-Term(TMT6plex); K6(TMT6plex) 4 Q3TI79 PUA domain-containing protein OS=Mus musculus OX=10090 GN=Dkc1 PE=2 SV=1 Q3TI79; Q3TM67; B7ZCL7; Q9ESX5 PUA domain-containing protein OS=Mus musculus OX=10090 GN=Dkc1 PE=2 SV=1; PUA domain-containing protein OS=Mus musculus OX=10090 GN=Dkc1 PE=2 SV=1; H/ACA ribonucleoprotein complex subunit DKC1 (Fragment) OS=Mus musculus OX=10090 GN=Dkc1 PE=1 SV=1; H/ACA ribonucleoprotein complex subunit DKC1 OS=Mus musculus OX=10090 GN=Dkc1 PE=1 SV=4 0 3 3 0.3573 0 1 1 1 386.25348 1156.74588 1156.74541 0.41 0.00016 0/0 0 0 9495123 HCD 30 MS2 31.77702 448.8 110 59.7607 17203 17203 17193 QEplus033719.raw F4 544.8 327.7 476.9 428.5 468.8 446.2 137 3.47 1 FALSE 0.0004793 0.007627 0.446 -250 78324 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGYDYDGYR [R].dGYDYDGYR.[L] N-Term(TMT6plex) 4 H7BX95 Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1 Q6PDM2-2; Q6PDM2-3; H7BX95; Q6PDM2 Isoform 2 of Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1; Isoform 3 of Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1; Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1; Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=3 0 2 2 0.6328 0 1 1 1 676.8017 1352.59612 1352.59563 0.36 0.00025 0/0 0 0 6994370 HCD 30 MS2 10.73004 514.6 110 59.768 17205 17205 17204 QEplus033719.raw F4 478.9 520.3 573.6 413.5 606.2 495.3 16 3.54 1 FALSE 1.14E-05 1.43E-05 1.018 -250 78343 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELTEEEK [KR].eLTEEEk.[KQ] N-Term(TMT6plex); K7(TMT6plex) 13 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; D6Q0F3; A0A5K1VVQ9; Q3TYJ3; A0A5K1VVQ1; O88485; A2ASS6-3; D3Z0M6; D6Q0F4; A2ASS6-2; E9Q8N1; O88485-2 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Cytoplasmic dynein intermediate chain 1 isoform 1.4 OS=Mus musculus OX=10090 GN=Dync1i1 PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Cytoplasmic dynein 1 intermediate chain 1 OS=Mus musculus OX=10090 GN=Dync1i1 PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Cytoplasmic dynein 1 intermediate chain 1 OS=Mus musculus OX=10090 GN=Dync1i1 PE=1 SV=2; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Cytoplasmic dynein 1 intermediate chain 1 OS=Mus musculus OX=10090 GN=Dync1i1 PE=1 SV=1; Cytoplasmic dynein intermediate chain 1 isoform 1.6 OS=Mus musculus OX=10090 GN=Dync1i1 PE=2 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 1B of Cytoplasmic dynein 1 intermediate chain 1 OS=Mus musculus OX=10090 GN=Dync1i1 0 2 2 0.354 0 1 1 1 668.37201 1335.73674 1335.74078 -3.03 -0.00202 0/0 0 0 14052713 HCD 30 MS2 17.3447 1196.3 110 59.7753 17208 17208 17204 QEplus033719.raw F4 1385.5 520.8 994.4 1641.9 844.8 1790.1 389 2.26 2 FALSE 0.001343 0.01903 0.29 -250 78368 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LETYENAR [R].lETYENAR.[K] N-Term(TMT6plex) 2 Q91YR7 Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1 Q91YR7; Q91YR7-2 Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1; Isoform 2 of Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 0 2 2 0.3985 0 1 1 1 612.82556 1224.64385 1224.64218 1.36 0.00083 0/0 0 0 7746507 HCD 30 MS2 50.09235 1015.8 110 59.7823 17211 17211 17204 QEplus033719.raw F4 1018.1 902.5 1104.4 873.8 1162.1 1034.1 203 2.66 1 FALSE 1.14E-05 0.0002276 0.789 -250 78376 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGATAEK [R].lGATAEk.[A] N-Term(TMT6plex); K7(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 3 3 0.2625 0 1 1 1 383.24081 1147.70789 1147.70869 -0.7 -0.00027 0/0 0 0 6512306 HCD 30 MS2 57.82177 551.7 110 59.7848 17212 17212 17204 QEplus033719.raw F4 586.9 404 548.7 500.3 651 619.1 245 2.4 1 FALSE 0.00403 0.07466 0.075 -250 78386 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLSPEEK [K].nLSPEEk.[Q] N-Term(TMT6plex); K7(TMT6plex) 4 A0A0R4J1N9 "Transcription factor A, mitochondrial OS=Mus musculus OX=10090 GN=Tfam PE=1 SV=1" A0A0R4J1N9; P40630-2; P40630; Q3TSW9 "Transcription factor A, mitochondrial OS=Mus musculus OX=10090 GN=Tfam PE=1 SV=1; Isoform Nuclear of Transcription factor A, mitochondrial OS=Mus musculus OX=10090 GN=Tfam; Transcription factor A, mitochondrial OS=Mus musculus OX=10090 GN=Tfam PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tfam PE=2 SV=1" 0 2 2 0.4336 0 1 1 1 637.87231 1274.73735 1274.73564 1.35 0.00086 0/0 0 0 6295962 HCD 30 MS2 15.2892 769.9 110 59.7873 17213 17213 17204 QEplus033719.raw F4 807.4 667.6 836.3 669.3 809.3 829.5 468 2.56 1 FALSE 0.001778 0.03052 0.214 -250 78394 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESEEALQK [K].eSEEALQk.[R] N-Term(TMT6plex); K8(TMT6plex) 4 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0; Q8C7E8 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.5248 0 1 1 1 696.39294 1391.77861 1391.77823 0.27 0.00019 0/0 0 0 6051176.5 HCD 30 MS2 26.63896 744.6 110 59.7898 17214 17214 17204 QEplus033719.raw F4 743.8 747.9 748.9 541.1 980.2 705.5 380 3.03 1 FALSE 1.14E-05 0.0001518 0.822 -250 78398 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APSDDGSLK [K].aPSDDGSLk.[S] N-Term(TMT6plex); K9(TMT6plex) 16 A0A4Y5WWJ7 Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1 E9Q405; Q6PER1; Q9JMH9-6; A0A1C7ZN10; E9QAX2; Q9JMH9-5; Q9JMH9-4; Q9JMH9-1; B2RRE2; A0A4Y5WWJ7; F6ZGN3; Q9JMH9-2; K3W4L0; Q9JMH9-7; Q9JMH9; E9QA74 Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Myo18a protein (Fragment) OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1; Isoform 6 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 5 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Isoform 4 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Isoform 1 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Myo18a protein OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1; Unconventional myosin-XVIIIa (Fragment) OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=2; Isoform 2 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 7 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=2; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1 0 2 2 0.628 0 1 1 1 674.37695 1347.74663 1347.75202 -4 -0.00269 0/0 0 0 4961583.5 HCD 30 MS2 34.15239 649.4 110 59.7971 17216 17216 17215 QEplus033719.raw F4 698.3 409.7 699 685.6 497.5 906.2 388 2.93 1 FALSE 1.14E-05 2.74E-05 0.964 -250 78405 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPAENIDNSGK [K].sPAENIDNSGk.[T] N-Term(TMT6plex); K11(TMT6plex) 2 Q9EP71 Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1 Q9EP71; A0A2I3BPY7 Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1; Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1 0 2 2 0.766 0 1 1 1 795.43164 1589.856 1589.85352 1.56 0.00124 0/0 0 0 10495038 HCD 30 MS2 0 301.8 110 59.7996 17217 17217 17215 QEplus033719.raw F4 261 317.5 352.4 198.9 407.4 273.7 320 4.23 1 FALSE 1.14E-05 4.67E-10 1.87 -250 78414 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAAYDK [K].vAAYDk.[L] N-Term(TMT6plex); K6(TMT6plex) 3 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 2 2 0.5106 0 1 1 1 562.83936 1124.67143 1124.67158 -0.13 -0.00007 0/0 0 0 69687880 HCD 30 MS2 23.36484 1152.5 12.706 59.8019 17218 17218 17215 QEplus033719.raw F4 1136.3 1023.4 1259.8 971.5 1505.4 1018.6 167 2.82 1 FALSE 0.003953 0.07378 0.078 -250 78424 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRDTIEVSK [K].gRDTIEVSk.[L] N-Term(TMT6plex); K9(TMT6plex) 2 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 A0A0R4J0I9; Q91ZX7 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 1 3 3 0.4055 0 1 1 1 488.28934 1462.85346 1462.86296 -6.5 -0.00317 0/0 0 0 25906246 HCD 30 MS2 38.27793 1007.8 30.993 59.8064 17220 17220 17215 QEplus033719.raw F4 1202.3 768.9 1121.5 892 875.7 1186.2 448 2.54 1 FALSE 0.001778 0.03056 0.214 -250 78430 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPLCGHCNNVIR [R].tPLcGHcNNVIR.[G] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl) 5 E9PYJ9; Q9JKS4 LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1;LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1 Q9JKS4-3; E9PYJ9; Q9JKS4; Q9JKS4-4; Q9JKS4-2 Isoform 3 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3; LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1; LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1; Isoform 4 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3; Isoform 2 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 0 3 3 0.7585 0 1 1 1 557.28766 1669.84842 1669.8464 1.21 0.00068 0/0 0 0 21513464 HCD 30 MS2 53.94561 712.9 52.136 59.8087 17221 17221 17215 QEplus033719.raw F4 694.8 679.7 773.6 665.2 648.4 815.6 222 4.39 2 FALSE 1.14E-05 7.99E-09 1.636 -250 78436 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIEHLK [K].qIEHLk.[D] N-Term(TMT6plex); K6(TMT6plex) 14 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 Q9QXZ0-3; B1ARU4; E9QA63; E9QNP1; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8; Q8C8N4 Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1 0 3 3 0.1 0 1 1 1 409.26181 1225.77088 1225.76688 3.26 0.00133 0/0 0 0 7322910.5 HCD 30 MS2 70.65035 854.3 68.823 59.8132 17223 17223 17215 QEplus033719.raw F4 1222.9 441.8 814.8 748.1 715.5 1182.6 181 2.5 3 FALSE 0.00192 0.03281 0.203 -250 78453 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDSTEPPYSQK [K].mDSTEPPYSQk.[R] N-Term(TMT6plex); M1(Oxidation); K11(TMT6plex) 6 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 0 3 3 0.6853 0 1 1 1 586.29797 1756.87937 1756.88277 -1.94 -0.00113 0/0 0 0 5879470 HCD 30 MS2 11.11286 582.2 110 59.8181 17225 17225 17215 QEplus033719.raw F4 624.8 447.7 610.8 490.1 690.5 629.1 190 3.4 1 FALSE 2.26E-05 0.001043 0.658 -250 78475 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DPTNIK [R].dPTNIk.[W] N-Term(TMT6plex); K6(TMT6plex) 6 A0A0A0MQF6 Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 A0A1D5RLD8; S4R1W8; A0A0A0MQF6; P16858; S4R1W1; S4R257 Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm10358 PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=2; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm3839 PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 0 2 2 0.0529 0 1 1 1 573.35095 1145.69463 1145.69304 1.38 0.00079 0/0 0 0 142715328 HCD 30 MS2 4.44822 921.2 9.221 59.8303 17229 17229 17226 QEplus033719.raw F4 1132.7 626.7 838.4 1123 806.2 1000 414 1.89 1 FALSE 0.007275 0.1162 -0.034 -250 78482 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FSEGTSADREIQR [R].fSEGTSADREIQR.[T] N-Term(TMT6plex) 2 P62334 26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=1 Q8QZS9; P62334 Psmc6 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc6 PE=2 SV=1; 26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=1 1 3 3 0.6544 0 1 1 1 575.63116 1724.87894 1724.87649 1.42 0.00082 0/0 0 0 34052260 HCD 30 MS2 27.25371 894.3 56.564 59.8325 17230 17230 17226 QEplus033719.raw F4 879.5 682.2 996.2 808.9 1001.4 997.7 246 4.08 1 FALSE 1.14E-05 1.16E-08 1.605 -250 78487 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GASQAGMLAPGTR [K].gASQAGMLAPGTR.[R] N-Term(TMT6plex) 4 Q9DAW9 Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 Q9DAW9; A0A0G2JFI6; Q99JN5; A0A0G2JDV8 Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1; Calponin-3 (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=4; Cnn3 protein (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 0 2 2 0.5727 0 1 1 1 723.39056 1445.77385 1445.77321 0.44 0.00032 0/0 0 0 34028260 HCD 30 MS2 5.227741 634.6 63.887 59.8348 17231 17231 17226 QEplus033719.raw F4 675.2 571.7 699.2 399.4 874.4 587.6 301 4.33 1 FALSE 1.14E-05 4.93E-09 1.675 -250 78494 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAGAPGIK [R].eAGAPGIk.[H] N-Term(TMT6plex); K8(TMT6plex) 3 A0A068BIT0 Solute carrier family 39 OS=Mus musculus OX=10090 GN=Slc39a7 PE=1 SV=1 A0A068BIT0; E9PV10; Q14C53 "Solute carrier family 39 OS=Mus musculus OX=10090 GN=Slc39a7 PE=1 SV=1; Zinc transporter SLC39A7 (Fragment) OS=Mus musculus OX=10090 GN=Slc39a7 PE=4 SV=2; Solute carrier family 39 (Zinc transporter), member 7 OS=Mus musculus OX=10090 GN=Slc39a7 PE=2 SV=1" 0 2 2 0.3609 0 1 1 1 600.87048 1200.73369 1200.73524 -1.29 -0.00078 0/0 0 0 10838009 HCD 30 MS2 24.25845 1347.8 110 59.8373 17232 17232 17226 QEplus033719.raw F4 1464.6 956.9 1381.8 1201.5 1475.1 1606.6 254 2.3 1 FALSE 0.002654 0.05277 0.134 -250 78497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LHVENEDKK [R].lHVENEDkk.[G] N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex) 4 Q5XJY5 Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=1 SV=2 Q5XJY5; Q8R1S6; Q3U4S9; Q3TDU1 Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=1 SV=2; Coatomer subunit delta (Fragment) OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1; Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1; Coatomer subunit delta (Fragment) OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1 1 4 4 0.5081 0 1 1 1 450.52133 1799.0635 1799.06301 0.27 0.00012 0/0 0 0 8121321.5 HCD 30 MS2 10.89524 807.6 110 59.8398 17233 17233 17226 QEplus033719.raw F4 882.7 612 780.6 745.7 932.4 892.2 364 3.07 1 FALSE 1.14E-05 0.0003491 0.753 -250 78506 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KSDPVVSYR [K-].kSDPVVSYR.[E] N-Term(TMT6plex); K1(TMT6plex) 17 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q3TSK4; Q8C153; P58252; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3TPG2; Q3UZ14; Q3TK17; Q99LT6; Q3TLB1; Q3TWX1; Q3TX47 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 1 3 3 0.5342 0 1 1 1 503.63327 1508.88526 1508.8837 1.03 0.00052 0/0 0 0 70599856 HCD 30 MS2 27.19123 990.8 18.652 59.8421 17234 17234 17226 QEplus033719.raw F4 1019.2 781.9 1156.1 868.2 972.5 1147.1 398 2.92 1 FALSE 1.14E-05 2.15E-05 0.984 -250 78520 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FQEAEERPK [R].fQEAEERPk.[V] N-Term(TMT6plex); K9(TMT6plex) 4 Q61699 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2 E9Q0U7; Q61699; Q8C6H1; Q61699-2 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=1; Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsph1 PE=2 SV=1; Isoform HSP105-beta of Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 0 3 3 0.6243 0 1 1 1 531.29767 1591.87845 1591.88443 -3.75 -0.00199 0/0 0 0 19047268 HCD 30 MS2 43.74786 1261.7 54.185 59.8466 17236 17236 17226 QEplus033719.raw F4 1313.4 1019.7 1389.1 1121.2 1331.8 1394.8 416 3.46 1 FALSE 1.14E-05 3.71E-05 0.939 -250 78527 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGVEAMNK [K].sGVEAMNk.[S] N-Term(TMT6plex); K8(TMT6plex) 1 Q9CQ62 "2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial OS=Mus musculus OX=10090 GN=Decr1 PE=1 SV=1" Q9CQ62 "2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial OS=Mus musculus OX=10090 GN=Decr1 PE=1 SV=1" 0 2 2 0.4748 0 1 1 1 647.3653 1293.72331 1293.72369 -0.29 -0.00019 0/0 0 0 26514398 HCD 30 MS2 12.96849 1347.4 70.332 59.8539 17238 17238 17237 QEplus033719.raw F4 1328.8 1165.3 1407.9 1308.1 1427.2 1447 381 2.78 1 FALSE 1.14E-05 0.0009112 0.67 -250 78535 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLAPEYEAAATR [K].rLAPEYEAAATR.[L] N-Term(TMT6plex) 2 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 P27773; F6Q404 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2; Protein disulfide-isomerase A3 (Fragment) OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=1 1 2 2 0.611 0 1 1 1 788.93677 1576.86626 1576.86447 1.13 0.00089 0/0 0 0 18077376 HCD 30 MS2 20.7737 434.7 110 59.8564 17239 17239 17237 QEplus033719.raw F4 411 369 500.2 353.8 515.7 458.4 392 3.65 1 FALSE 1.14E-05 3.95E-05 0.934 -250 78553 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSENEEFVEVGR [R].rSENEEFVEVGR.[L] N-Term(TMT6plex) 4 Q3TYK4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1 Q8C3Z4; Q3TYK4; Q3UBA7; Q9DBC7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1; cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Mus musculus OX=10090 GN=Prkar1a PE=1 SV=3 1 3 3 0.7378 0 1 1 1 560.62378 1679.85678 1679.85503 1.05 0.00059 0/0 0 0 23502802 HCD 30 MS2 6.312142 668.9 110 59.8634 17242 17242 17237 QEplus033719.raw F4 745.3 489.2 748.8 610.1 626.7 793.1 213 5.53 1 FALSE 1.14E-05 6.38E-10 1.844 -250 78559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHPAVVIR [K].vHPAVVIR.[Q] N-Term(TMT6plex) 1 P62830 60S ribosomal protein L23 OS=Mus musculus OX=10090 GN=Rpl23 PE=1 SV=1 P62830 60S ribosomal protein L23 OS=Mus musculus OX=10090 GN=Rpl23 PE=1 SV=1 0 3 3 0.5302 0 1 1 1 373.91165 1119.7204 1119.71998 0.38 0.00014 0/0 0 0 13906516 HCD 30 MS2 12.99194 431.3 83.012 59.8657 17243 17243 17237 QEplus033719.raw F4 423.9 369.9 483.7 310.3 471.5 528.8 149 2.98 1 FALSE 1.14E-05 2.29E-05 0.979 -250 78569 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NGETELCMEGR [K].nGETELcMEGR.[G] N-Term(TMT6plex); C7(Carbamidomethyl) 2 Q8BK64 Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Mus musculus OX=10090 GN=Ahsa1 PE=1 SV=2 Q8BK64; Q3TL79 Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Mus musculus OX=10090 GN=Ahsa1 PE=1 SV=2; Aha1_N domain-containing protein OS=Mus musculus OX=10090 GN=Ahsa1 PE=2 SV=1 0 2 2 0.8593 0 1 1 1 762.85284 1524.69841 1524.69839 0.01 0.00001 0/0 0 0 10765926 HCD 30 MS2 10.94669 503.7 110 59.8682 17244 17244 17237 QEplus033719.raw F4 505 425.6 555.8 427.5 584.3 523.8 33 4.05 1 FALSE 1.14E-05 2.59E-08 1.539 -250 78574 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEISGDLAR [K].sEISGDLAR.[L] N-Term(TMT6plex) 7 P14824; Q99JX6 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3;Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 Q3V2Z4; P14824; F8WIT2; Q3UI56; Q8CEX0; Q99JX6; Q3UDK4 Annexin OS=Mus musculus OX=10090 PE=2 SV=1; Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 0 2 2 0.4826 0 1 1 1 588.82513 1176.64299 1176.64218 0.69 0.0004 0/0 0 0 3797582.5 HCD 30 MS2 61.24026 1127.2 110 59.8707 17245 17245 17237 QEplus033719.raw F4 1190.8 898.2 1097 1034.5 1323.5 1219.3 315 2.3 2 FALSE 0.0002019 0.004101 0.524 -250 78586 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KNPGIAAK [K].kNPGIAAk.[W] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 11 Q8C9L6; A2API8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1;Paralemmin A kinase anchor protein OS=Mus musculus OX=10090 GN=Pakap PE=1 SV=1 Q69ZV5; O54931-3; O54931-4; Q8C9L6; A2API8; O54931-2; Q99L95; A0A5F8MPZ6; O54931-5; O54931; F7AA26 MKIAA0920 protein (Fragment) OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1; Isoform 3 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; Isoform 4 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1; Paralemmin A kinase anchor protein OS=Mus musculus OX=10090 GN=Pakap PE=1 SV=1; Isoform 2 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; Akap2 protein OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1; Paralemmin A kinase anchor protein (Fragment) OS=Mus musculus OX=10090 GN=Pakap PE=1 SV=1; Isoform 5 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2 PE=1 SV=3; Paralemmin A kinase anchor protein (Fragment) OS=Mus musculus OX=10090 GN=Pakap PE=1 SV=1 1 3 3 0.5811 0 1 1 1 495.99606 1485.97364 1485.97201 1.09 0.00054 0/0 0 0 14760908 HCD 30 MS2 39.27469 1394.7 110 59.8758 17247 17247 17237 QEplus033719.raw F4 1722.7 1028.1 1428.6 1288.8 1656.9 1243 147 3.39 2 FALSE 1.14E-05 9.82E-06 1.049 -250 78592 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITEFCHR [K].iTEFcHR.[F] N-Term(TMT6plex); C5(Carbamidomethyl) 13 P09103 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2 P09103; Q3URP6; Q3TWE3; Q3U738; Q3TT76; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; Q3UA23; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 0 3 3 0.5984 0 1 1 1 397.87701 1191.61649 1191.61419 1.93 0.00077 0/0 0 0 9883508 HCD 30 MS2 55.79244 958.4 58.607 59.8831 17249 17249 17248 QEplus033719.raw F4 997 717.2 989.1 857.8 1200.3 988.7 187 2.54 1 FALSE 0.001335 0.01842 0.295 -250 78599 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSSYGNQELK [K].gSSYGNQELk.[K] N-Term(TMT6plex); K10(TMT6plex) 2 Q9D517 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma OS=Mus musculus OX=10090 GN=Agpat3 PE=1 SV=2 Q9D517; Q3TXT9 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma OS=Mus musculus OX=10090 GN=Agpat3 PE=1 SV=2; PlsC domain-containing protein OS=Mus musculus OX=10090 GN=Agpat3 PE=2 SV=1 0 2 2 0.6383 0 1 1 1 770.92322 1540.83916 1540.83714 1.31 0.00101 0/0 0 0 12841545 HCD 30 MS2 0 643.9 110 59.8856 17250 17250 17248 QEplus033719.raw F4 567.5 297 786.8 1012.8 242.4 957 372 4.12 1 FALSE 1.14E-05 2.67E-08 1.536 -250 78605 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMPIRK [R].sMPIRk.[D] N-Term(TMT6plex); K6(TMT6plex) 4 Q4FZH2 Ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1 B1ARA5; Q3U7N1; B1ARA3; Q4FZH2 60S ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1; KOW domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; 60S ribosomal protein L26 (Fragment) OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1; Ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1 1 3 3 0.232 0 1 1 1 397.25458 1189.74918 1189.74912 0.05 0.00002 0/0 0 0 29230044 HCD 30 MS2 21.08135 746.4 35.189 59.8878 17251 17251 17248 QEplus033719.raw F4 790 552.9 765.2 682.4 927.2 760.8 345 1.94 1 FALSE 0.004305 0.07886 0.064 -250 78613 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETLEQAK [R].eTLEQAk.[V] N-Term(TMT6plex); K7(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.2844 0 1 1 1 638.87903 1276.75078 1276.75129 -0.4 -0.00025 0/0 0 0 27991536 HCD 30 MS2 34.75402 1341.9 74.974 59.8901 17252 17252 17248 QEplus033719.raw F4 1528.5 1021.6 1305.2 1201.4 1533.3 1461.4 449 3.27 2 FALSE 0.0001603 0.003667 0.537 -250 78617 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FNDGTDEK [R].fNDGTDEk.[K] N-Term(TMT6plex); K8(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 0 2 2 0.6509 0 1 1 1 692.36206 1383.71684 1383.71563 0.88 0.00061 0/0 0 0 25353766 HCD 30 MS2 11.36143 1089.5 78.484 59.8924 17253 17253 17248 QEplus033719.raw F4 1129 977.1 1183 1394.8 756.5 1096.8 190 3.18 1 FALSE 1.14E-05 0.0005754 0.71 -250 78621 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALAEEAK [R].aLAEEAk.[R] N-Term(TMT6plex); K7(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.1384 0 1 1 1 595.36237 1189.71745 1189.71926 -1.52 -0.0009 0/0 0 0 21161876 HCD 30 MS2 22.81736 1543.6 81.807 59.8947 17254 17254 17248 QEplus033719.raw F4 1736.6 1156.9 1521.7 1394.2 1908.7 1543.6 371 3.18 2 FALSE 0.0001504 0.003317 0.548 -250 78640 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDSTEPPYSQK [K].mDSTEPPYSQk.[R] N-Term(TMT6plex); M1(Oxidation); K11(TMT6plex) 6 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 0 2 2 0.6554 0 1 1 1 878.94427 1756.88127 1756.88277 -0.85 -0.00075 0/0 0 0 5574015.5 HCD 30 MS2 0 271.5 110 59.8997 17256 17256 17248 QEplus033719.raw F4 278.8 203.4 333.9 232.2 275.2 305.3 192 2.96 1 FALSE 1.14E-05 2.86E-06 1.151 -250 78646 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEDGAAPSPSSETPK [K].aEDGAAPSPSSETPk.[K] N-Term(TMT6plex); K15(TMT6plex) 3 P26645 Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2 A0A0A1HAM8; P26645; Q05BL6 80K protein OS=Mus musculus OX=10090 GN=Marcks PE=2 SV=1; Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2; Marcks protein (Fragment) OS=Mus musculus OX=10090 GN=Marcks PE=2 SV=1 0 3 3 0.7945 0 1 1 1 634.66705 1901.98661 1901.98566 0.5 0.00032 0/0 0 0 40131460 HCD 30 MS2 36.47878 500.4 35.943 59.902 17257 17257 17248 QEplus033719.raw F4 467.2 465 508.4 377 715.2 469.6 298 4.33 1 FALSE 1.14E-05 8.96E-11 2.006 -250 78658 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESEEALQK [K].eSEEALQk.[R] N-Term(TMT6plex); K8(TMT6plex) 4 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0; Q8C7E8 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 0 3 3 0.4767 0 1 1 1 464.59866 1391.78144 1391.77823 2.3 0.00107 0/0 0 0 12111177 HCD 30 MS2 20.98124 506.7 60.641 59.9115 17260 17260 17259 QEplus033719.raw F4 486.8 447.1 521.4 398.5 665.1 521.5 404 2.58 1 FALSE 0.0008991 0.01236 0.368 -250 78664 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGTMSEK [K].vGTMSEk.[F] N-Term(TMT6plex); K7(TMT6plex) 3 A2AEX6 Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1 A2AEX6; A2AEX7; A2AEX8 Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1; Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1; Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1 0 2 2 0.4522 0 1 1 1 605.3504 1209.69353 1209.69133 1.82 0.0011 0/0 0 0 20848986 HCD 30 MS2 57.01572 1741.7 91.171 59.9138 17261 17261 17259 QEplus033719.raw F4 2233.6 890.9 1566.5 2545.5 1198.1 2015.6 337 2.3 1 FALSE 0.0003211 0.006189 0.475 -250 78672 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGPLSGPYR [R].gGPLSGPYR.[L] N-Term(TMT6plex) 1 P16015 Carbonic anhydrase 3 OS=Mus musculus OX=10090 GN=Ca3 PE=1 SV=3 P16015 Carbonic anhydrase 3 OS=Mus musculus OX=10090 GN=Ca3 PE=1 SV=3 0 2 2 0.5636 0 1 1 1 566.82001 1132.63274 1132.63122 1.34 0.00076 0/0 0 0 174737296 HCD 30 MS2 22.25158 700.1 5.795 59.9161 17262 17262 17259 QEplus033719.raw F4 742.8 553.6 660.3 461.8 1283.9 498 251 2.36 1 FALSE 3.35E-05 0.001284 0.64 -250 78678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GASQAGMLAPGTR [K].gASQAGMLAPGTR.[R] N-Term(TMT6plex) 4 Q9DAW9 Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 Q9DAW9; A0A0G2JFI6; Q99JN5; A0A0G2JDV8 Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1; Calponin-3 (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=4; Cnn3 protein (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 0 3 3 0.6483 0 1 1 1 482.59647 1445.77484 1445.77321 1.13 0.00054 0/0 0 0 69247320 HCD 30 MS2 32.16073 396.4 27.415 59.9183 17263 17263 17259 QEplus033719.raw F4 397.1 351.8 447.9 333.5 440.1 408.3 310 5.43 1 FALSE 1.14E-05 1.06E-09 1.802 -250 78684 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KIQQNTFTR [K].kIQQNTFTR.[W] N-Term(TMT6plex); K1(TMT6plex) 9 Q80X90; B9EKP5; Q8VHX6 "Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3;Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1;Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3" Q80X90; B7FAV1; F6XC15; B9EKP5; Q8BTM8-2; Q8BTM8; Q8VHX6-2; Q8VHX6; B7FAU9 "Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Isoform 2 of Filamin-A OS=Mus musculus OX=10090 GN=Flna; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 1 3 3 0.4194 0 1 1 1 531.98792 1593.94919 1593.9477 0.94 0.0005 0/0 0 0 52205320 HCD 30 MS2 40.67967 1381.6 29.918 59.9206 17264 17264 17259 QEplus033719.raw F4 1434.9 1128.4 1554.1 1141 1468.5 1562.6 459 2.79 3 FALSE 1.14E-05 0.0001884 0.804 -250 78694 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YRPGTVALR [R].yRPGTVALR.[E] N-Term(TMT6plex) 11 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; E0CZ27; E0CYR7; P68433; F8WI35; B9EI85; E0CYN1; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; H3.3 histone A (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; H3.3 histone A (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 0 3 3 0.5579 0 1 1 1 421.25775 1261.7587 1261.75782 0.7 0.00029 0/0 0 0 27564814 HCD 30 MS2 11.44255 381.9 37.781 59.9228 17265 17265 17259 QEplus033719.raw F4 366.9 366.4 418.9 259.5 515.6 363.9 577 3.8 2 FALSE 1.14E-05 0.0004336 0.734 -250 78702 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQAEAELALR [K].rQAEAELALR.[V] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.5224 0 1 1 1 462.60703 1385.80652 1385.80623 0.21 0.0001 0/0 0 0 23876014 HCD 30 MS2 11.58201 596.2 54.635 59.9251 17266 17266 17259 QEplus033719.raw F4 699.3 380.6 643.6 477.1 555.6 821.2 359 5.8 2 FALSE 1.14E-05 6.13E-11 2.037 -250 78726 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETGEHLVHVK [K].eTGEHLVHVk.[K] N-Term(TMT6plex); K10(TMT6plex) 7 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; I7HPX4; B7FAV1; F6Z2C0; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=4 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=8; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.5591 0 1 1 1 803.96967 1606.93205 1606.93171 0.21 0.00017 0/0 0 0 7197903 HCD 30 MS2 0 250.3 110 59.9326 17269 17269 17259 QEplus033719.raw F4 250.9 230.8 265.4 175.5 342.6 236.9 471 3.72 1 FALSE 1.14E-05 1.93E-08 1.563 -250 78742 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VCASGMK [K].vcASGMk.[A] N-Term(TMT6plex); C2(Carbamidomethyl); K7(TMT6plex) 2 Q3TQP7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Acat1 PE=2 SV=1 Q3TQP7; Q8QZT1 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Acat1 PE=2 SV=1; Acetyl-CoA acetyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Acat1 PE=1 SV=1" 0 2 2 0.4542 0 1 1 1 605.83551 1210.66374 1210.66882 -4.19 -0.00254 0/0 0 0 31465874 HCD 30 MS2 55.96158 1325.8 31.811 59.9422 17272 17272 17270 QEplus033719.raw F4 1533 782 1283.7 1746.2 1164.5 1445.7 266 2.62 1 FALSE 0.0007151 0.01034 0.399 -250 78758 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TACGVGEFR [K].tAcGVGEFR.[C] N-Term(TMT6plex); C3(Carbamidomethyl) 2 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 A0A0R4J0I9; Q91ZX7 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 0 2 2 0.5753 0 1 1 1 613.31348 1225.61968 1225.61967 0 0 0/0 0 0 20228672 HCD 30 MS2 36.04176 1059.5 80.389 59.947 17274 17274 17270 QEplus033719.raw F4 1024.2 967.4 1194.7 850.6 1236.1 1083.8 129 2.92 1 FALSE 1.14E-05 6.53E-05 0.892 -250 78781 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVDEMNGK [K].aVDEMNGk.[E] N-Term(TMT6plex); K8(TMT6plex) 7 P29341 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2 P29341; Q3U8U8; Q3V2M1; Q62029; Q792Y0; Q8BN32; Q99KL3 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Pabpc2 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc2 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 PE=3 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1 0 2 2 0.5341 0 1 1 1 661.36255 1321.71782 1321.71861 -0.6 -0.00039 0/0 0 0 10254022 HCD 30 MS2 24.633 999.4 110 59.9542 17277 17277 17270 QEplus033719.raw F4 1162.4 878.2 1026.8 770 1158.4 1000.7 328 2.79 1 FALSE 1.14E-05 0.000245 0.782 -250 78801 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERGTAYFK [K].eRGTAYFk.[E] N-Term(TMT6plex); K8(TMT6plex) 2 P30416 Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=5 P30416; F6S2D5 Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=5; Peptidylprolyl isomerase (Fragment) OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=9 1 3 3 0.3704 0 1 1 1 477.28058 1429.82718 1429.82037 4.76 0.00227 0/0 0 0 23368174 HCD 30 MS2 44.52784 1111 44.288 59.9615 17280 17280 17270 QEplus033719.raw F4 1087.9 1057.3 1199.2 876.4 1420.1 1025.2 319 2.97 1 FALSE 5.44E-05 0.001845 0.606 -250 78807 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETGEHLVHVK [K].eTGEHLVHVk.[K] N-Term(TMT6plex); K10(TMT6plex) 7 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; I7HPX4; B7FAV1; F6Z2C0; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=4 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=8; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.6508 0 1 1 1 536.31519 1606.931 1606.93171 -0.44 -0.00024 0/0 0 0 44259956 HCD 30 MS2 20.78362 605.4 34.728 59.9688 17282 17282 17281 QEplus033719.raw F4 656.7 532.6 625.6 511.1 757.8 548.8 464 4.21 1 FALSE 1.14E-05 3.76E-10 1.888 -250 78812 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KSDPVVSYR [K-].kSDPVVSYR.[E] N-Term(TMT6plex); K1(TMT6plex) 17 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q3TSK4; Q8C153; P58252; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3TPG2; Q3UZ14; Q3TK17; Q99LT6; Q3TLB1; Q3TWX1; Q3TX47 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 1 2 2 0.6655 0 1 1 1 754.9469 1508.88652 1508.8837 1.87 0.00141 0/0 0 0 18173860 HCD 30 MS2 16.52496 544.5 110 59.9713 17283 17283 17281 QEplus033719.raw F4 511.7 387.4 635 473 627.3 632.7 387 2.87 1 FALSE 1.14E-05 0.0005376 0.716 -250 78822 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRQYAEK [R].lRQYAEk.[K] N-Term(TMT6plex); K7(TMT6plex) 12 Q91VK2; Q80T06 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1;Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1 Q91VK2; P57776-2; F6ZFU0; Q80T06; A0A0R4J1E2; D3YY68; E9QN08; A0A0R4J1L2; D3YZT9; P57776-3; P57776; D3YUQ9 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 2 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 3 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=3; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=8 1 3 3 0.2066 0 1 1 1 455.94638 1365.82459 1365.82546 -0.63 -0.00029 0/0 0 0 29645634 HCD 30 MS2 42.75627 986.3 33.948 59.9736 17284 17284 17281 QEplus033719.raw F4 869.6 919.4 1123 694.8 1212 1099 330 3.05 2 FALSE 0.002552 0.05019 0.141 -250 78836 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDRPEAISEER [K].iDRPEAISEER.[L] N-Term(TMT6plex) 2 Q9CQC9 GTP-binding protein SAR1b OS=Mus musculus OX=10090 GN=Sar1b PE=1 SV=1 Q3U281; Q9CQC9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Sar1b PE=2 SV=1; GTP-binding protein SAR1b OS=Mus musculus OX=10090 GN=Sar1b PE=1 SV=1 0 3 3 0.5429 0 1 1 1 515.2807 1543.82755 1543.82775 -0.13 -0.00007 0/0 0 0 14883474 HCD 30 MS2 51.51043 1212.8 76.211 59.9781 17286 17286 17281 QEplus033719.raw F4 1391.4 876.8 1272.7 1232.6 1156.1 1347 273 4.66 1 FALSE 1.14E-05 1.26E-06 1.218 -250 78844 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KIQQNTFTR [K].kIQQNTFTR.[W] N-Term(TMT6plex); K1(TMT6plex) 9 Q80X90; B9EKP5; Q8VHX6 "Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3;Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1;Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3" Q80X90; B7FAV1; F6XC15; B9EKP5; Q8BTM8-2; Q8BTM8; Q8VHX6-2; Q8VHX6; B7FAU9 "Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Isoform 2 of Filamin-A OS=Mus musculus OX=10090 GN=Flna; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 1 2 2 0.5449 0 1 1 1 797.47693 1593.94658 1593.9477 -0.7 -0.00056 0/0 0 0 5219321.5 HCD 30 MS2 0 425.8 110 59.9806 17287 17287 17281 QEplus033719.raw F4 417.2 377.4 484.4 342.5 489.2 443.9 472 3.23 3 FALSE 1.14E-05 0.0006477 0.7 -250 78854 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLEVEEEEQR [R].sLEVEEEEQR.[I] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.6501 0 1 1 1 738.87476 1476.74224 1476.73793 2.91 0.00215 0/0 0 0 5729565.5 HCD 30 MS2 0 322.2 110 59.9831 17288 17288 17281 QEplus033719.raw F4 391.1 208.8 383.6 300.5 237.5 411.6 167 4.23 1 FALSE 1.14E-05 8.35E-08 1.442 -250 78863 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FTENDSEK [K].fTENDSEk.[V] N-Term(TMT6plex); K8(TMT6plex) 3 Q9CWL8 Beta-catenin-like protein 1 OS=Mus musculus OX=10090 GN=Ctnnbl1 PE=1 SV=1 Q3UKS4; Q9CWL8; Q3UJX2 DUF1716 domain-containing protein OS=Mus musculus OX=10090 GN=Ctnnbl1 PE=2 SV=1; Beta-catenin-like protein 1 OS=Mus musculus OX=10090 GN=Ctnnbl1 PE=1 SV=1; DUF1716 domain-containing protein OS=Mus musculus OX=10090 GN=Ctnnbl1 PE=2 SV=1 0 2 2 0.6216 0 1 1 1 714.37616 1427.74504 1427.74185 2.24 0.0016 0/0 0 0 5105804 HCD 30 MS2 0 432.3 110 59.9857 17289 17289 17281 QEplus033719.raw F4 441.6 386.1 460.5 331.9 531 442.6 210 2.96 1 FALSE 1.14E-05 0.0001762 0.81 -250 78869 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAGEVTYADAHK [R].qAGEVTYADAHk.[GE] N-Term(TMT6plex); K12(TMT6plex) 5 Q542V3; Q3TWW8 Serine/arginine-rich-splicing factor 4 OS=Mus musculus OX=10090 GN=Srsf4 PE=1 SV=1;Serine/arginine-rich splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1 Q542V3; Q8VE97; Q3TWW8; Q8BKL0; Q8K3A8 Serine/arginine-rich-splicing factor 4 OS=Mus musculus OX=10090 GN=Srsf4 PE=1 SV=1; Serine/arginine-rich splicing factor 4 OS=Mus musculus OX=10090 GN=Srsf4 PE=2 SV=1; Serine/arginine-rich splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf6 PE=2 SV=1; Sfrs4 protein OS=Mus musculus OX=10090 GN=Srsf4 PE=2 SV=1 0 3 3 0.7204 0 1 1 1 583.31738 1747.9376 1747.93792 -0.19 -0.00011 0/0 0 0 43737356 HCD 30 MS2 61.03756 519.7 21.675 59.9879 17290 17290 17281 QEplus033719.raw F4 499.2 489.7 550.7 475.3 607.4 495.8 374 3.97 2 FALSE 1.14E-05 1.18E-10 1.983 -250 78885 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLAPEYEAAATR [K].rLAPEYEAAATR.[L] N-Term(TMT6plex) 2 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 P27773; F6Q404 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2; Protein disulfide-isomerase A3 (Fragment) OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=1 1 2 2 0.5421 0 1 1 1 788.93713 1576.86699 1576.86447 1.6 0.00126 0/0 0 0 12243053 HCD 30 MS2 44.26662 370.8 110 59.9975 17293 17293 17292 QEplus033719.raw F4 373.5 272.9 435.4 313.4 439 390.5 385 2.73 1 FALSE 1.14E-05 0.0001517 0.822 -250 78889 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQEFGK [K].eQEFGk.[L] N-Term(TMT6plex); K6(TMT6plex) 5 Q91VH6 Protein MEMO1 OS=Mus musculus OX=10090 GN=Memo1 PE=1 SV=1 A0A3B2W4I2; Q91VH6; A0A3F2YNL8; A0A3B2W7C9; Q3TWT2 Mediator of ErbB2-driven cell motility 1 OS=Mus musculus OX=10090 GN=Memo1 PE=1 SV=1; Protein MEMO1 OS=Mus musculus OX=10090 GN=Memo1 PE=1 SV=1; Mediator of ErbB2-driven cell motility 1 OS=Mus musculus OX=10090 GN=Memo1 PE=1 SV=1; Mediator of ErbB2-driven cell motility 1 OS=Mus musculus OX=10090 GN=Memo1 PE=1 SV=1; Mediator of ErbB2-driven cell motility 1 OS=Mus musculus OX=10090 GN=Memo1 PE=2 SV=1 0 2 2 0.3957 0 1 1 1 598.33942 1195.67156 1195.67231 -0.63 -0.00038 0/0 0 0 18188938 HCD 30 MS2 0 1545.3 110 60 17294 17294 17292 QEplus033719.raw F4 1757 1093.1 1518.2 1461.4 1736.4 1706 309 2.3 1 FALSE 0.0057 0.09578 0.018 -250 78894 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVQEAEK [R].mVQEAEk.[Y] N-Term(TMT6plex); K7(TMT6plex) 16 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 0 2 2 0.4463 0 1 1 1 646.86823 1292.72917 1292.72844 0.56 0.00036 0/0 0 0 56631396 HCD 30 MS2 5.34396 1277.4 37.392 60.0023 17295 17295 17292 QEplus033719.raw F4 1519 979.6 1292.6 1093 1483.5 1297 409 3.07 1 FALSE 0.0003996 0.007019 0.458 -250 78903 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLYDPK [R].hLYDPk.[NLM] N-Term(TMT6plex); K6(TMT6plex) 12 Q543F3; B2RSH3; Q9DAW9 Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1;Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=2 SV=1;Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 Q922F8; Q543F3; B2RSH3; Q9DAW9; A0A1L1SRV0; A0A0G2JFI6; Q08091-2; Q99JN5; D3Z7R6; A0A1L1SUB2; A0A0G2JDV8; Q8CBQ2 Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=2 SV=1; Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=1 SV=1; Calponin-3 (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=4; Isoform Beta of Calponin-1 OS=Mus musculus OX=10090 GN=Cnn1; Cnn3 protein (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1; Calponin (Fragment) OS=Mus musculus OX=10090 GN=Cnn1 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=2 SV=1 0 3 3 0.3344 0 1 1 1 410.91336 1230.72553 1230.72468 0.69 0.00028 0/0 0 0 45415660 HCD 30 MS2 18.17432 548.1 23.35 60.0045 17296 17296 17292 QEplus033719.raw F4 526.3 478.6 561.8 349.6 732.3 640 311 3.08 3 FALSE 0.001101 0.01427 0.342 -250 78923 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGPGFYTTR [K].dGPGFYTTR.[C] N-Term(TMT6plex) 1 Q8BMS1 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1" Q8BMS1 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1" 0 2 2 0.6731 0 1 1 1 621.8205 1242.63371 1242.63162 1.69 0.00105 0/0 0 0 18052572 HCD 30 MS2 48.47292 1828.7 110 60.0116 17299 17299 17292 QEplus033719.raw F4 1925.9 1305.6 1964.2 2069.4 1645.9 2061.3 99 2.6 1 FALSE 0.0003408 0.006416 0.47 -250 78930 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FDENAK [K].fDENAk.[VT] N-Term(TMT6plex); K6(TMT6plex) 2 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 P09041; P09411 Phosphoglycerate kinase 2 OS=Mus musculus OX=10090 GN=Pgk2 PE=1 SV=4; Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 0 2 2 0.4407 0 1 1 1 591.33215 1181.65703 1181.65666 0.31 0.00019 0/0 0 0 15124129 HCD 30 MS2 19.62604 1689.7 110 60.0141 17300 17300 17292 QEplus033719.raw F4 2188.9 943.9 1437.6 1792.7 1940.2 1835 259 1.77 1 FALSE 0.006767 0.1078 -0.014 -250 78934 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLEAQAEK [K].sLEAQAEk.[Y] N-Term(TMT6plex); K8(TMT6plex) 15 G5E8R1; A0A0R4J1P2 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1 E9Q455; G5E8R1; Q8BSH3; D3Z6I8; E9Q452; F8WID5; E9Q454; A0A0R4J1P2; P21107; G5E8R0; Q564G1; B7ZNL3; E9Q7Q3; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=3; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 0 2 2 0.4045 0 1 1 1 667.3905 1333.77373 1333.77275 0.73 0.00049 0/0 0 0 14906727 HCD 30 MS2 8.312357 1404.3 110 60.0166 17301 17301 17292 QEplus033719.raw F4 1616.4 1242.2 1444 1090.2 1617.1 1415.7 538 3.56 2 FALSE 1.14E-05 0.0001286 0.836 -250 78950 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLEGEESR [KR].lLEGEESR.[LI] N-Term(TMT6plex) 24 Q3TWV0; Q3V2C6; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 Q3KNV1; A0A0A6YWC8; Q9NSB2; Q3TWV0; P15331; Q3V2C6; Q3U6S1; Q3UD36; P15331-2; Q6ISB0; P11679; Q9H552; G5E846; Q3UAX1; P08729; Q3V2S4; Q9DCV7; P15331-3; P31001; G3X981; Q3TFD9; P05787; A0A2R8W6R6; Q5FWJ3 "TREMBL:Q3KNV1;Q96GE1 Tax_Id=9606 Gene_Symbol=KRT7 keratin 7; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; SWISS-PROT:Q9NSB2 Keratin, type II cuticular Hb4 (Hair keratin, type II Hb4) - Homo sapiens (Human).; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Peripherin OS=Mus musculus OX=10090 GN=Prph PE=1 SV=2; IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Isoform 3u of Peripherin OS=Mus musculus OX=10090 GN=Prph; TREMBL:Q6ISB0 Keratin, hair, basic, 4 - Homo sapiens (Human).; Keratin, type II cytoskeletal 8 OS=Mus musculus OX=10090 GN=Krt8 PE=1 SV=4; TREMBL:Q9H552 Tax_Id=9606 Gene_Symbol=- Keratin-8-like protein 1; Peripherin OS=Mus musculus OX=10090 GN=Prph PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:P08729 Tax_Id=9606 Gene_Symbol=KRT7 Keratin, type II cytoskeletal 7; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:Q9DCV7 Tax_Id=10090 Gene_Symbol=Krt7 Keratin, type II cytoskeletal 7; Isoform 5b of Peripherin OS=Mus musculus OX=10090 GN=Prph; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3; Peripherin OS=Mus musculus OX=10090 GN=Prph PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:P05787 Tax_Id=9606 Gene_Symbol=KRT8 Keratin, type II cytoskeletal 8; Peripherin OS=Mus musculus OX=10090 GN=Prph PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1" 0 2 2 0.5901 0 1 1 1 581.31976 1161.63225 1161.63128 0.83 0.00048 0/0 0 0 944252288 HCD 30 MS2 3.549438 476.4 1.351 60.0262 17304 17304 17303 QEplus033719.raw F4 459.7 428.4 499.9 422.3 555.7 492.4 257 3.22 3 TRUE 0.0001504 0.003388 0.545 -250 78954 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVASVAK [K].aVASVAk.[K] N-Term(TMT6plex); K7(TMT6plex) 3 C6EQH3 "Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Suclg2 PE=2 SV=1" Q9Z2I8-2; C6EQH3; Q9Z2I8 "Isoform 2 of Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Suclg2; Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Suclg2 PE=2 SV=1; Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Suclg2 PE=1 SV=3" 0 2 2 0.308 0 1 1 1 552.36224 1103.71721 1103.71887 -1.5 -0.00083 0/0 0 0 10972887 HCD 30 MS2 49.13941 1783.4 110 60.0287 17305 17305 17303 QEplus033719.raw F4 1785.5 1436.2 1815.5 1917.7 2006.1 1739.4 104 2.5 1 FALSE 0.0006477 0.009902 0.406 -250 78964 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAEILQESR [K].qAEILQESR.[M] N-Term(TMT6plex) 2 Q5I0U7 Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=1 A0A1Y7VJ48; Q5I0U7 Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=1; Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=1 0 2 2 0.5719 0 1 1 1 651.86511 1302.72295 1302.7215 1.12 0.00073 0/0 0 0 33728064 HCD 30 MS2 4.823322 765.8 59.635 60.0309 17306 17306 17303 QEplus033719.raw F4 800.5 708.6 839.5 545.2 926.2 775.1 312 3.2 1 FALSE 1.14E-05 4.48E-05 0.924 -250 78970 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHPAVVIR [K].vHPAVVIR.[Q] N-Term(TMT6plex) 1 P62830 60S ribosomal protein L23 OS=Mus musculus OX=10090 GN=Rpl23 PE=1 SV=1 P62830 60S ribosomal protein L23 OS=Mus musculus OX=10090 GN=Rpl23 PE=1 SV=1 0 2 2 0.4581 0 1 1 1 560.36432 1119.72136 1119.71998 1.23 0.00069 0/0 0 0 25877828 HCD 30 MS2 35.79689 728.5 74.755 60.0332 17307 17307 17303 QEplus033719.raw F4 710 516.3 783.2 661.6 802.4 897.4 149 2.27 1 FALSE 0.0006383 0.009846 0.407 -250 78980 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVKPQLAQGR [R].sVkPQLAQGR.[S] N-Term(TMT6plex); K3(TMT6plex) 2 Q8K2F8 Protein LSM14 homolog A OS=Mus musculus OX=10090 GN=Lsm14a PE=1 SV=1 Q8K2F8; A0A0U1RP90 Protein LSM14 homolog A OS=Mus musculus OX=10090 GN=Lsm14a PE=1 SV=1; Protein LSM14 homolog A (Fragment) OS=Mus musculus OX=10090 GN=Lsm14a PE=1 SV=1 0 3 3 0.519 0 1 1 1 514.65625 1541.9542 1541.95278 0.92 0.00047 0/0 0 0 16681013 HCD 30 MS2 51.4163 1544.4 110 60.0357 17308 17308 17303 QEplus033719.raw F4 1713.5 1193.2 1669.1 1328.7 1632.8 1729.4 283 2.37 1 FALSE 0.0002419 0.004831 0.505 -250 78996 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYSFTTTAER [-R].gYSFTTTAER.[E] N-Term(TMT6plex) 22 O89054; Q3UAF6 Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q6IWE2; Q3UCF8; Q3TSB7; Q9QZ83; O89054; Q3UAF6; Q3UD81; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; G3UZ07; Q3TIJ9; Q61276; Q3UBP6; E9Q5F4; Q3UBQ4; P63260; Q3U939; Q3UGS0; Q3U804 "Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 0 2 2 0.7368 0 1 1 1 681.3454 1361.68352 1361.68986 -4.66 -0.00317 0/0 0 0 6561570 HCD 30 MS2 0 606.1 110 60.0407 17310 17310 17303 QEplus033719.raw F4 566.7 597.3 671 457.7 787.7 556 124 4.37 2 FALSE 1.14E-05 1.56E-06 1.201 -250 79022 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTPVPGK [R].kTPVPGk.[A] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 2 Q52L50 RAS related protein 1b OS=Mus musculus OX=10090 GN=Rap1b PE=1 SV=1 Q52L50; A0A1W2P777 RAS related protein 1b OS=Mus musculus OX=10090 GN=Rap1b PE=1 SV=1; Ras-related protein Rap-1b (Fragment) OS=Mus musculus OX=10090 GN=Rap1b PE=1 SV=1 1 3 3 0.3333 0 1 1 1 471.98483 1413.93995 1413.93965 0.21 0.0001 0/0 0 0 20933752 HCD 30 MS2 44.48722 993 64.949 60.0475 17313 17313 17303 QEplus033719.raw F4 1097.8 855.6 1152.6 920.3 1017.6 914 105 2.67 1 FALSE 0.004198 0.07676 0.07 -250 79031 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EALLGR [K].eALLGR.[V] N-Term(TMT6plex) 1 Q99PT1 Rho GDP-dissociation inhibitor 1 OS=Mus musculus OX=10090 GN=Arhgdia PE=1 SV=3 Q99PT1 Rho GDP-dissociation inhibitor 1 OS=Mus musculus OX=10090 GN=Arhgdia PE=1 SV=3 0 2 2 0.0516 0 1 1 1 444.27927 887.55126 887.55118 0.08 0.00004 0/0 0 0 137717504 HCD 30 MS2 14.51725 598.5 7.688 60.0548 17315 17315 17314 QEplus033719.raw F4 612.5 540.5 644.3 444.7 732.4 616.8 164 2.13 1 FALSE 0.005014 0.08695 0.043 -250 79071 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TCVQEITAHRK [K].tcVQEITAHRk.[K] N-Term(TMT6plex); C2(Carbamidomethyl); K11(TMT6plex) 6 P58404; Q9ERG2 Striatin-4 OS=Mus musculus OX=10090 GN=Strn4 PE=1 SV=2;Striatin-3 OS=Mus musculus OX=10090 GN=Strn3 PE=1 SV=1 P58404; Q3U3S0; Q9ERG2; B2RQS1; P58404-2; V9GXE7 Striatin-4 OS=Mus musculus OX=10090 GN=Strn4 PE=1 SV=2; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Strn4 PE=2 SV=1; Striatin-3 OS=Mus musculus OX=10090 GN=Strn3 PE=1 SV=1; Striatin-3 OS=Mus musculus OX=10090 GN=Strn3 PE=1 SV=1; Isoform 2 of Striatin-4 OS=Mus musculus OX=10090 GN=Strn4; Striatin-4 (Fragment) OS=Mus musculus OX=10090 GN=Strn4 PE=1 SV=1 1 4 4 0.4921 0 1 1 1 451.00925 1801.01516 1801.01546 -0.17 -0.00008 0/0 0 0 9451813 HCD 30 MS2 36.1255 708.9 95.875 60.0663 17320 17320 17314 QEplus033719.raw F4 783 531.2 756.8 627.7 812.4 742.2 439 3.82 2 FALSE 1.14E-05 0.000177 0.81 -250 79079 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEYDESGPSIVHR [K].qEYDESGPSIVHR.[K-] N-Term(TMT6plex) 20 Q3UAF6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q3UCF8; Q3TSB7; Q3UAF6; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; F8WGM8; Q99NC5; Q3TIJ9; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P63260; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 0 2 2 0.6646 0 1 1 1 873.43457 1745.86186 1745.86559 -2.14 -0.00186 0/0 0 0 6610109.5 HCD 30 MS2 0 355.9 110 60.0689 17321 17321 17314 QEplus033719.raw F4 375.1 404.6 308.5 322.8 582.2 142.3 152 4.83 1 FALSE 1.14E-05 5.57E-13 2.425 -250 79087 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPQASTYSYETSDR [K].tPQASTYSYETSDR.[C] N-Term(TMT6plex) 2 B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 P14873; B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=1 SV=2; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 0 2 2 0.8071 0 1 1 1 917.93805 1834.86882 1834.86565 1.73 0.00158 0/0 0 0 2864478.5 HCD 30 MS2 0 166.3 110 60.0739 17323 17323 17314 QEplus033719.raw F4 158.7 138.9 196.9 169 164.7 169.8 83 5.39 1 FALSE 1.14E-05 8.44E-12 2.201 -250 79117 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAVTYTEHAK [R].dAVTYTEHAk.[R] N-Term(TMT6plex); K10(TMT6plex) 2 P62806 Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2 Q61667; P62806 Histone H4 (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2 0 3 3 0.7353 0 1 1 1 531.62811 1592.86979 1592.86844 0.84 0.00045 0/0 0 0 113595104 HCD 30 MS2 28.3047 809.5 12.683 60.088 17328 17328 17325 QEplus033719.raw F4 839.6 864.3 833.4 597.6 1057 664.9 389 4.76 1 FALSE 1.14E-05 6.25E-10 1.846 -250 79125 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAVDAFR [R].nAVDAFR.[V] N-Term(TMT6plex) 5 Q6A0C9 AP-2 complex subunit mu (Fragment) OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1 Q6A0C9; Q5FWI9; Q3TWV4; Q3TH69; Q3UCW9 AP-2 complex subunit mu (Fragment) OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1; AP-2 complex subunit mu OS=Mus musculus OX=10090 GN=Ap2m1 PE=1 SV=1; AP-2 complex subunit mu OS=Mus musculus OX=10090 GN=Ap2m1 PE=1 SV=1; AP-2 complex subunit mu OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1; MHD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1 0 2 2 0.4541 0 1 1 1 511.28656 1021.56584 1021.56281 2.97 0.00152 0/0 0 0 21083628 HCD 30 MS2 56.28561 1130.3 33.406 60.0902 17329 17329 17325 QEplus033719.raw F4 1135.7 862.7 1159.9 881.4 1611.6 1130.5 165 2.07 1 FALSE 0.0006294 0.00953 0.412 -250 79130 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLYDPK [R].hLYDPk.[NLM] N-Term(TMT6plex); K6(TMT6plex) 12 Q543F3; B2RSH3; Q9DAW9 Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1;Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=2 SV=1;Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 Q922F8; Q543F3; B2RSH3; Q9DAW9; A0A1L1SRV0; A0A0G2JFI6; Q08091-2; Q99JN5; D3Z7R6; A0A1L1SUB2; A0A0G2JDV8; Q8CBQ2 Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=2 SV=1; Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=1 SV=1; Calponin-3 (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=4; Isoform Beta of Calponin-1 OS=Mus musculus OX=10090 GN=Cnn1; Cnn3 protein (Fragment) OS=Mus musculus OX=10090 GN=Cnn3 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1; Calponin (Fragment) OS=Mus musculus OX=10090 GN=Cnn1 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=2 SV=1 0 2 2 0.4348 0 1 1 1 615.86597 1230.72466 1230.72468 -0.02 -0.00001 0/0 0 0 18106756 HCD 30 MS2 20.85697 1371.1 110 60.0927 17330 17330 17325 QEplus033719.raw F4 1349.3 1211.1 1475.5 979.4 1860.9 1350.1 313 1.84 3 FALSE 0.003006 0.0587 0.118 -250 79137 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TFYSCTTEGR [R].tFYScTTEGR.[Q] N-Term(TMT6plex); C5(Carbamidomethyl) 12 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.748 0 1 1 1 725.84576 1450.68425 1450.6834 0.59 0.00043 0/0 0 0 16687622 HCD 30 MS2 0 511.1 110 60.0953 17331 17331 17325 QEplus033719.raw F4 454.9 463.4 619 635 377.1 517.4 64 3.73 3 FALSE 1.14E-05 1.24E-06 1.22 -250 79141 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGPVMDR [R].mGPVMDR.[M] N-Term(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; Q9D0E1-2; Q3TQ66; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 2 2 0.3094 0 1 1 1 517.77014 1034.53301 1034.53244 0.55 0.00028 0/0 0 0 15439596 HCD 30 MS2 51.2224 1959.1 110 60.0978 17332 17332 17325 QEplus033719.raw F4 2120.2 1731.9 2200.2 1611.9 2095.9 1994.7 172 2.65 1 FALSE 0.0008445 0.01178 0.377 -250 79149 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLEVEEEEQR [R].sLEVEEEEQR.[I] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 3 3 0.6899 0 1 1 1 492.91794 1476.73926 1476.73793 0.9 0.00044 0/0 0 0 8737668 HCD 30 MS2 14.94395 641.8 110 60.1003 17333 17333 17325 QEplus033719.raw F4 801.7 417.2 663.8 614.8 620.1 733.5 140 3.87 1 FALSE 0.0006035 0.008975 0.422 -250 79158 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQAVDVSPLR [R].rQAVDVSPLR.[R] N-Term(TMT6plex) 4 Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 P97461; D3Z1S8; D3YYM6; Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=3; 40S ribosomal protein S5 (Fragment) OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1; 40S ribosomal protein S5 (Fragment) OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1; 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 1 2 2 0.1217 0 1 1 1 685.41028 1369.81328 1369.81131 1.44 0.00098 0/0 0 0 8409799 HCD 30 MS2 0 282.3 110 60.1028 17334 17334 17325 QEplus033719.raw F4 296.7 220.4 286.6 250.5 319.4 320.3 285 2.3 1 FALSE 0.002334 0.0466 0.152 -250 79162 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STASALTK [R].sTASALTk.[L] N-Term(TMT6plex); K8(TMT6plex) 8 Q4JG03 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1 F6XP90; Q7TMY8-4; Q4JG03; Q7TMY8-3; Q7TMY8; Q7TMY8-2; A2AFQ0; Q8BKX3 E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=1; Isoform 4 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; Isoform 3 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=5; Isoform 2 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=1; UBA domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1 0 2 2 0.397 0 1 1 1 618.88324 1236.7592 1236.75637 2.29 0.00141 0/0 0 0 6618824.5 HCD 30 MS2 33.14949 873.9 110 60.1053 17335 17335 17325 QEplus033719.raw F4 900.7 705.1 923.9 783.5 998.9 931.4 208 2.67 1 FALSE 1.14E-05 0.0002034 0.798 -250 79171 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQFSTAK [K].dQFSTAk.[D] N-Term(TMT6plex); K7(TMT6plex) 3 Q8CD92 Tetratricopeptide repeat protein 27 OS=Mus musculus OX=10090 GN=Ttc27 PE=1 SV=2 A0A3Q4L363; Q8CD92-2; Q8CD92 Tetratricopeptide repeat protein 27 (Fragment) OS=Mus musculus OX=10090 GN=Ttc27 PE=1 SV=1; Isoform 2 of Tetratricopeptide repeat protein 27 OS=Mus musculus OX=10090 GN=Ttc27; Tetratricopeptide repeat protein 27 OS=Mus musculus OX=10090 GN=Ttc27 PE=1 SV=2 0 2 2 0.3868 0 1 1 1 627.85895 1254.71062 1254.70942 0.95 0.0006 0/0 0 0 6452847 HCD 30 MS2 0 807.4 110 60.1126 17337 17337 17336 QEplus033719.raw F4 770.6 728 844.2 675.4 1014.8 811.2 332 2.43 1 FALSE 0.0007056 0.01025 0.4 -250 79182 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEYDESGPSIVHR [K].qEYDESGPSIVHR.[K-] N-Term(TMT6plex) 20 Q3UAF6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q3UCF8; Q3TSB7; Q3UAF6; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; F8WGM8; Q99NC5; Q3TIJ9; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P63260; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 0 3 3 0.8333 0 1 1 1 582.6272 1745.86704 1745.86559 0.83 0.00048 0/0 0 0 150086768 HCD 30 MS2 27.19515 275.8 7.606 60.1174 17339 17339 17336 QEplus033719.raw F4 264.4 254.6 280.2 267.8 352.9 234.8 154 5.82 1 FALSE 1.14E-05 3.17E-12 2.282 -250 79192 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVEVISNR [K].aVEVISNR.[S] N-Term(TMT6plex) 8 Q1PG84 PBK1 OS=Mus musculus domesticus OX=10092 GN=Rsl1d1 PE=2 SV=1 Q1PG84; A0A2R8VHW2; Q9CSF9; Q3TS64; Q3TLJ3; Q3TH37; Q8BVY0; Q3UL54 PBK1 OS=Mus musculus domesticus OX=10092 GN=Rsl1d1 PE=2 SV=1; Ribosomal L1 domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Rsl1d1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1; Ribosomal L1 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rsl1d1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rsl1d1 PE=2 SV=1 0 2 2 0.5714 0 1 1 1 558.83301 1116.65874 1116.65744 1.16 0.00065 0/0 0 0 38320776 HCD 30 MS2 19.77383 525.1 25.357 60.1219 17341 17341 17336 QEplus033719.raw F4 469.2 412.1 610 418.5 636.8 604 343 2.8 1 FALSE 2.26E-05 0.0009974 0.662 -250 79202 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IADGYEQAAR [R].iADGYEQAAR.[I] N-Term(TMT6plex) 2 P80316 T-complex protein 1 subunit epsilon OS=Mus musculus OX=10090 GN=Cct5 PE=1 SV=1 E0CZA1; P80316 T-complex protein 1 subunit epsilon (Fragment) OS=Mus musculus OX=10090 GN=Cct5 PE=1 SV=1; T-complex protein 1 subunit epsilon OS=Mus musculus OX=10090 GN=Cct5 PE=1 SV=1 0 2 2 0.6571 0 1 1 1 661.84497 1322.68266 1322.69019 -5.69 -0.00377 0/0 0 0 26076850 HCD 30 MS2 75.94078 852 30.361 60.1242 17342 17342 17336 QEplus033719.raw F4 903.2 731.5 933.8 616.7 1052.2 874.9 220 3.15 1 FALSE 1.14E-05 6.36E-07 1.275 -250 79218 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENSGYLK [K].eNSGYLk.[A] N-Term(TMT6plex); K7(TMT6plex) 3 Q9CZW5 Mitochondrial import receptor subunit TOM70 OS=Mus musculus OX=10090 GN=Tomm70 PE=1 SV=2 Q9CZW5; Q3TSX8; Q80TT4 Mitochondrial import receptor subunit TOM70 OS=Mus musculus OX=10090 GN=Tomm70 PE=1 SV=2; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Tomm70a PE=2 SV=1; MKIAA0719 protein (Fragment) OS=Mus musculus OX=10090 GN=Tomm70a PE=2 SV=1 0 2 2 0.4856 0 1 1 1 634.86719 1268.7271 1268.72507 1.6 0.00101 0/0 0 0 18973062 HCD 30 MS2 21.74347 1498.9 110 60.129 17344 17344 17336 QEplus033719.raw F4 1506.4 1307.6 1616.6 1387.1 1598.4 1577.5 313 2.43 1 FALSE 0.0008183 0.01133 0.383 -250 79223 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITGCTSPGK [K].iTGcTSPGk.[T] N-Term(TMT6plex); C4(Carbamidomethyl); K9(TMT6plex) 4 P80315 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3 P80315; Q3TII0; Q3UJZ8; G5E839 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1 0 2 2 0.375 0 1 1 1 689.89124 1378.77519 1378.77646 -0.92 -0.00063 0/0 0 0 10691782 HCD 30 MS2 44.26738 946.5 110 60.1315 17345 17345 17336 QEplus033719.raw F4 1077.4 851.7 1007.4 838.6 956.3 947.7 489 2.4 1 FALSE 1.14E-05 0.0002372 0.785 -250 79264 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYCQVIR [K].kYcQVIR.[I] N-Term(TMT6plex); K1(TMT6plex); C3(Carbamidomethyl) 7 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB15; Q3UB90; Q3U9L3; Q3T9U9; A0A087WQK0; P27659 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 (Fragment) OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3 1 3 3 0.5242 0 1 1 1 475.62012 1424.8458 1424.84481 0.69 0.00033 0/0 0 0 28608430 HCD 30 MS2 33.03544 1126.3 45.419 60.1503 17352 17352 17347 QEplus033719.raw F4 1141 903.8 1300.6 1117 1028.5 1266.8 299 2.27 1 FALSE 0.001591 0.02465 0.247 -250 79272 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLVPDNRK [K].dLVPDNRk.[N] N-Term(TMT6plex); K8(TMT6plex) 1 Q4VA29 "RNA transcription, translation and transport factor protein OS=Mus musculus OX=10090 GN=Rtraf PE=1 SV=1" Q4VA29 "RNA transcription, translation and transport factor protein OS=Mus musculus OX=10090 GN=Rtraf PE=1 SV=1" 1 3 3 0.3415 0 1 1 1 472.28604 1414.84357 1414.84183 1.23 0.00058 0/0 0 0 28265174 HCD 30 MS2 31.84648 1095.9 61.773 60.1526 17353 17353 17347 QEplus033719.raw F4 1189.8 947.7 1205.1 931.8 1170.2 1130.9 297 2.84 1 FALSE 0.0001504 0.003327 0.547 -250 79277 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FSADGMR [K].fSADGMR.[L] N-Term(TMT6plex) 3 Q8BMJ2 "Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2" Q6ZPT2; A0A494BBF9; Q8BMJ2 "Leucyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1; Leucyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Lars PE=1 SV=1; Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2" 0 2 2 0.348 0 1 1 1 506.75821 1012.50914 1012.50833 0.8 0.00041 0/0 0 0 19901326 HCD 30 MS2 52.61774 998.2 36.268 60.1548 17354 17354 17347 QEplus033719.raw F4 949.6 821.2 1094 874.6 1145.8 1103.8 55 2.27 1 FALSE 0.001607 0.02541 0.242 -250 79284 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAVTYTEHAK [R].dAVTYTEHAk.[R] N-Term(TMT6plex); K10(TMT6plex) 2 P62806 Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2 Q61667; P62806 Histone H4 (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2 0 2 2 0.619 0 1 1 1 796.93842 1592.86955 1592.86844 0.7 0.00056 0/0 0 0 13523180 HCD 30 MS2 5.373545 616.6 110 60.1573 17355 17355 17347 QEplus033719.raw F4 576.4 788.6 605.3 387.8 911.8 429.8 393 5.04 1 FALSE 1.14E-05 1.09E-08 1.61 -250 79294 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQHEDQVEQYKK [R].aQHEDQVEQYkk.[E] N-Term(TMT6plex); K11(TMT6plex); K12(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 1 4 4 0.7292 0 1 1 1 548.30969 2190.21694 2190.21219 2.17 0.00119 0/0 0 0 7738468.5 HCD 30 MS2 17.93875 678.2 110 60.1598 17356 17356 17347 QEplus033719.raw F4 693.1 544 718.5 601.2 824.7 687.4 415 4.8 1 FALSE 1.14E-05 2.01E-09 1.749 -250 79301 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDGTLR [K].lDGTLR.[T] N-Term(TMT6plex) 3 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 Q3U454; A0A0R4J0I9; Q91ZX7 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lrp1 PE=2 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 0 2 2 0.0909 0 1 1 1 452.27679 903.54631 903.5461 0.24 0.00011 0/0 0 0 8220443.5 HCD 30 MS2 17.40834 1072.1 110 60.1623 17357 17357 17347 QEplus033719.raw F4 1132.9 920.3 1201.5 820.2 1099.1 1258.3 164 2.31 1 FALSE 0.00656 0.1047 -0.006 -250 79311 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPAVTLNER [K].sPAVTLNER.[F] N-Term(TMT6plex) 9 Q8K019 Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=2 Q8K019; A0A087WRN1; F8WI22; Q8K019-3; Q8K019-2; A0A087WQA0; Q3UR37; Q3UDL9; Q3TSZ0 Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=2; Bcl-2-associated transcription factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Isoform 3 of Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1; Isoform 2 of Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1; Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1 0 2 2 0.5757 0 1 1 1 608.34888 1215.69048 1215.68947 0.83 0.00051 0/0 0 0 36666584 HCD 30 MS2 14.1766 812.9 51.632 60.1697 17359 17359 17358 QEplus033719.raw F4 809 674.7 906.2 757.4 776.2 954 367 3.04 1 FALSE 1.14E-05 0.000108 0.851 -250 79320 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQDDVTK [K].vQDDVTk.[L] N-Term(TMT6plex); K7(TMT6plex) 1 Q8K1J6 "CCA tRNA nucleotidyltransferase 1, mitochondrial OS=Mus musculus OX=10090 GN=Trnt1 PE=1 SV=1" Q8K1J6 "CCA tRNA nucleotidyltransferase 1, mitochondrial OS=Mus musculus OX=10090 GN=Trnt1 PE=1 SV=1" 0 2 2 0.4745 0 1 1 1 631.87207 1262.73686 1262.73564 0.97 0.00061 0/0 0 0 4490164.5 HCD 30 MS2 0 882.6 110 60.1722 17360 17360 17358 QEplus033719.raw F4 1094.6 733.2 861.7 720.1 1015.3 870.9 455 2.55 1 FALSE 0.0008268 0.01153 0.38 -250 79329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLEAQAEK [K].sLEAQAEk.[Y] N-Term(TMT6plex); K8(TMT6plex) 15 G5E8R1; A0A0R4J1P2 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1 E9Q455; G5E8R1; Q8BSH3; D3Z6I8; E9Q452; F8WID5; E9Q454; A0A0R4J1P2; P21107; G5E8R0; Q564G1; B7ZNL3; E9Q7Q3; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=3; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 0 3 3 0.4479 0 1 1 1 445.26251 1333.77298 1333.77275 0.17 0.00008 0/0 0 0 64279412 HCD 30 MS2 32.42074 600 14.314 60.1744 17361 17361 17358 QEplus033719.raw F4 658.2 515.7 629.8 488.4 660 648.1 536 3.17 2 FALSE 0.0008445 0.01163 0.379 -250 79337 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESIESEIRR [R].eSIESEIRR.[E] N-Term(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 1 3 3 0.3673 0 1 1 1 449.91928 1347.74329 1347.74296 0.25 0.00011 0/0 0 0 36597228 HCD 30 MS2 17.86509 563 34.329 60.1767 17362 17362 17358 QEplus033719.raw F4 614.9 452.3 627.5 483.5 610.9 588.6 396 3.92 1 FALSE 1.14E-05 2.75E-05 0.964 -250 79350 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQQNTFTR [K].iQQNTFTR.[W] N-Term(TMT6plex) 9 Q80X90; B9EKP5; Q8VHX6 "Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3;Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1;Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3" Q80X90; B7FAV1; F6XC15; B9EKP5; Q8BTM8-2; Q8BTM8; Q8VHX6-2; Q8VHX6; B7FAU9 "Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Isoform 2 of Filamin-A OS=Mus musculus OX=10090 GN=Flna; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.4843 0 1 1 1 618.84821 1236.68913 1236.6898 -0.54 -0.00033 0/0 0 0 20239442 HCD 30 MS2 12.22734 1290.9 110 60.1815 17364 17364 17358 QEplus033719.raw F4 1347 1126 1412.6 1023.7 1468.5 1367.4 401 2.87 3 FALSE 1.14E-05 0.0004172 0.738 -250 79380 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVSQDGK [R].lVSQDGk.[S] N-Term(TMT6plex); K7(TMT6plex) 7 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30; Q9CT46 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 2 2 0.3904 0 1 1 1 602.86926 1204.73125 1204.73016 0.9 0.00055 0/0 0 0 22410486 HCD 30 MS2 41.16739 1101.6 48.541 60.1905 17368 17368 17358 QEplus033719.raw F4 1341.7 985.8 1147.6 851 1333 950.5 454 2.51 1 FALSE 0.0003408 0.006421 0.47 -250 79388 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLEISHQK [K].qLEISHQk.[L] N-Term(TMT6plex); K8(TMT6plex) 10 Q52KI7 Low density lipoprotein receptor-related protein associated protein 1 OS=Mus musculus OX=10090 GN=Lrpap1 PE=1 SV=1 F6WMD1; Q52KI7; Q3TL96; Q6PEM5; Q6PB52; Q8C252; Q5D0B0; A0A1S6GWI9; Q6ZY49; Q8K295 Alpha-2-macroglobulin receptor-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Lrpap1 PE=1 SV=1; Low density lipoprotein receptor-related protein associated protein 1 OS=Mus musculus OX=10090 GN=Lrpap1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Lrpap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Lrpap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Lrpap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Low density lipoprotein receptor-associated protein 1 OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Lrpap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1 0 3 3 0.5 0 1 1 1 480.95767 1440.85846 1440.85748 0.68 0.00033 0/0 0 0 20590914 HCD 30 MS2 35.0581 910.2 63.233 60.1978 17370 17370 17369 QEplus033719.raw F4 1025.1 664.4 906.7 786.6 1094.8 983.8 337 4.14 1 FALSE 1.14E-05 3.02E-05 0.956 -250 79395 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTQVDGNSPVR [K].vTQVDGNSPVR.[F] N-Term(TMT6plex) 4 Q5XJY5 Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=1 SV=2 Q5XJY5; Q8R1S6; Q3U4S9; Q3TDU1 Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=1 SV=2; Coatomer subunit delta (Fragment) OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1; Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1; Coatomer subunit delta (Fragment) OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1 0 2 2 0.587 0 1 1 1 700.88812 1400.76897 1400.76951 -0.39 -0.00027 0/0 0 0 11701129 HCD 30 MS2 13.97097 584.8 110 60.2003 17371 17371 17369 QEplus033719.raw F4 610.6 514.6 603.3 461.5 724.7 594.4 333 3.68 1 FALSE 1.14E-05 1.50E-09 1.773 -250 79402 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVQEAEK [R].mVQEAEk.[Y] N-Term(TMT6plex); K7(TMT6plex) 16 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 0 3 3 0.4431 0 1 1 1 431.58139 1292.72962 1292.72844 0.91 0.00039 0/0 0 0 79825296 HCD 30 MS2 6.807309 476.5 13.7 60.2048 17373 17373 17369 QEplus033719.raw F4 509.5 323.2 481.3 452.1 583.5 509.6 412 3.34 1 FALSE 0.001685 0.02765 0.229 -250 79426 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IEESIDR [R].iEESIDR.[V] N-Term(TMT6plex) 4 Q3ULG5 DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1 Q3ULG5; Q3UC10; Q8C5L1; P97311 DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=2 SV=1; DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Mcm6 PE=2 SV=1; DNA replication licensing factor MCM6 OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1 0 2 2 0.3133 0 1 1 1 545.80096 1090.59465 1090.59417 0.44 0.00024 0/0 0 0 13709952 HCD 30 MS2 54.33507 1608.5 93.041 60.2116 17376 17376 17369 QEplus033719.raw F4 1725 1305.2 1498.3 1196.9 2444.3 1481 310 2.49 1 FALSE 0.0002419 0.004795 0.506 -250 79431 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CTESEEEEVTK [K].cTESEEEEVTk.[G] N-Term(TMT6plex); C1(Carbamidomethyl); K11(TMT6plex) 4 E9PYI8 Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp14 PE=1 SV=1 E9PYI8; Q9JMA1; Q3TC32; Q80UN0 Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp14 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase 14 OS=Mus musculus OX=10090 GN=Usp14 PE=1 SV=3; USP domain-containing protein OS=Mus musculus OX=10090 GN=Usp14 PE=2 SV=1; Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp14 PE=2 SV=1 0 2 2 0.8633 0 1 1 1 899.94263 1798.87798 1798.87808 -0.06 -0.00005 0/0 0 0 6682024.5 HCD 30 MS2 0 359 110 60.2141 17377 17377 17369 QEplus033719.raw F4 387.1 294.3 397 276.5 445.1 354.1 134 4.61 1 FALSE 1.14E-05 8.10E-10 1.824 -250 79446 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYCQVIR [K].kYcQVIR.[I] N-Term(TMT6plex); K1(TMT6plex); C3(Carbamidomethyl) 7 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB15; Q3UB90; Q3U9L3; Q3T9U9; A0A087WQK0; P27659 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 (Fragment) OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3 1 2 2 0.5024 0 1 1 1 712.92603 1424.84477 1424.84481 -0.03 -0.00002 0/0 0 0 10775435 HCD 30 MS2 11.32383 494.7 110 60.2189 17379 17379 17369 QEplus033719.raw F4 452.7 455.3 591.3 439.6 519.1 510 300 2.11 1 FALSE 0.001641 0.02675 0.234 -250 79470 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITGCTSPGK [K].iTGcTSPGk.[T] N-Term(TMT6plex); C4(Carbamidomethyl); K9(TMT6plex) 4 P80315 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3 P80315; Q3TII0; Q3UJZ8; G5E839 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1 0 3 3 0.3852 0 1 1 1 460.26285 1378.77399 1378.77646 -1.79 -0.00082 0/0 0 0 14642456 HCD 30 MS2 75.99773 1041.5 58.257 60.2307 17383 17383 17380 QEplus033719.raw F4 1137.8 860.6 1121.7 882.3 1141 1105.6 452 2.57 1 FALSE 0.0009921 0.01315 0.357 -250 79487 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESIESEIRR [R].eSIESEIRR.[E] N-Term(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 1 2 2 0.2347 0 1 1 1 674.37524 1347.74321 1347.74296 0.19 0.00013 0/0 0 0 11798848 HCD 30 MS2 0 401.3 110 60.238 17386 17386 17380 QEplus033719.raw F4 432.3 323.2 433.5 357.2 422.5 439.1 393 3.11 1 FALSE 1.14E-05 0.0002991 0.766 -250 79503 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYPSLANR [K].kYPSLANR.[N] N-Term(TMT6plex); K1(TMT6plex) 7 E9PUD2 Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1 E9PUD2; Q8K1M6-3; A0A2U3TZ67; Q8K1M6-4; Q8K1M6; Q8K1M6-2; Q3U4P3 Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1; Isoform 3 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1; Isoform 4 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=2; Isoform 2 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein (Fragment) OS=Mus musculus OX=10090 GN=Dnm1l PE=2 SV=1 1 3 3 0.5267 0 1 1 1 469.62238 1406.85257 1406.852 0.4 0.00019 0/0 0 0 6374803.5 HCD 30 MS2 42.26867 941.9 110 60.243 17388 17388 17380 QEplus033719.raw F4 1019.8 765.1 1064.5 894.9 875.2 1031.7 375 2.43 1 FALSE 0.001473 0.02125 0.271 -250 79517 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CTESEEEEVTK [K].cTESEEEEVTk.[G] N-Term(TMT6plex); C1(Carbamidomethyl); K11(TMT6plex) 4 E9PYI8 Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp14 PE=1 SV=1 E9PYI8; Q9JMA1; Q3TC32; Q80UN0 Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp14 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase 14 OS=Mus musculus OX=10090 GN=Usp14 PE=1 SV=3; USP domain-containing protein OS=Mus musculus OX=10090 GN=Usp14 PE=2 SV=1; Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp14 PE=2 SV=1 0 3 3 0.8494 0 1 1 1 600.29785 1798.879 1798.87808 0.51 0.00031 0/0 0 0 12453557 HCD 30 MS2 29.16273 768.6 110 60.248 17390 17390 17380 QEplus033719.raw F4 807 552.8 798 883.2 678.1 892.4 141 3.32 1 FALSE 1.14E-05 5.22E-06 1.101 -250 79539 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHAVGDIPGVR [K].gHAVGDIPGVR.[F] N-Term(TMT6plex) 5 Q9CWI9 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1 Q497E1; Q9CSN9; Q9CWI9; Q9CZI5; P62267 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 (Fragment) OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=1 SV=3 0 3 3 0.6305 0 1 1 1 436.25287 1306.74405 1306.7429 0.88 0.00038 0/0 0 0 147720208 HCD 30 MS2 29.01966 111.3 6.197 60.26 17394 17394 17391 QEplus033719.raw F4 119.6 80.5 116.5 101.7 108.2 141.2 483 4.79 1 FALSE 1.14E-05 6.28E-09 1.655 -250 79569 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IADGYEQAAR [R].iADGYEQAAR.[I] N-Term(TMT6plex) 2 P80316 T-complex protein 1 subunit epsilon OS=Mus musculus OX=10090 GN=Cct5 PE=1 SV=1 E0CZA1; P80316 T-complex protein 1 subunit epsilon (Fragment) OS=Mus musculus OX=10090 GN=Cct5 PE=1 SV=1; T-complex protein 1 subunit epsilon OS=Mus musculus OX=10090 GN=Cct5 PE=1 SV=1 0 2 2 0.7257 0 1 1 1 661.84906 1322.69084 1322.69019 0.49 0.00032 0/0 0 0 59012124 HCD 30 MS2 46.18874 1018.2 28.856 60.2691 17398 17398 17391 QEplus033719.raw F4 1061.9 889.8 1126.5 824.9 1139 1067.2 265 3.5 1 FALSE 1.14E-05 6.15E-08 1.467 -250 79577 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FRDGPPLR [R].fRDGPPLR.[G] N-Term(TMT6plex) 3 Q80U88 Eukaryotic translation initiation factor 4H (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0038 PE=4 SV=3 Q80U88; Q9WUK2-2; Q9WUK2 Eukaryotic translation initiation factor 4H (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0038 PE=4 SV=3; Isoform Short of Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h; Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h PE=1 SV=3 1 3 3 0.3497 0 1 1 1 396.23474 1186.68967 1186.68941 0.22 0.00009 0/0 0 0 29098612 HCD 30 MS2 11.74449 495.1 31.573 60.2713 17399 17399 17391 QEplus033719.raw F4 489.1 416.2 541.7 405.8 617.2 500.6 359 3.26 1 FALSE 2.26E-05 0.001086 0.655 -250 79618 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDVVPK [R].gDVVPk.[D] N-Term(TMT6plex); K6(TMT6plex) 11 P68369; Q52L87; A0A0A0MQA5 Tubulin alpha-1A chain OS=Mus musculus OX=10090 GN=Tuba1a PE=1 SV=1;Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=1 SV=1;Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1 Q5FW91; Q3TIZ0; Q9JJZ2; Q99KA2; Q3UX10; P68369; Q9D9Y2; P05213; Q52L87; A0A0A0MQA5; P68368 Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba3a PE=1 SV=1; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=2 SV=1; Tubulin alpha-8 chain OS=Mus musculus OX=10090 GN=Tuba8 PE=1 SV=1; Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba1b PE=2 SV=1; Tubulin alpha chain-like 3 OS=Mus musculus OX=10090 GN=Tubal3 PE=2 SV=2; Tubulin alpha-1A chain OS=Mus musculus OX=10090 GN=Tuba1a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Tubulin alpha-1B chain OS=Mus musculus OX=10090 GN=Tuba1b PE=1 SV=2; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=1 SV=1; Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1; Tubulin alpha-4A chain OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1 0 2 2 0.1167 0 1 1 1 536.84204 1072.67681 1072.67667 0.13 0.00007 0/0 0 0 23694026 HCD 30 MS2 25.69169 1333.3 74.611 60.2899 17406 17406 17402 QEplus033719.raw F4 1630.5 1113.3 1269.8 1121.7 1665.4 1199.1 149 1.8 3 FALSE 0.007381 0.1193 -0.04 -250 79628 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHAVGDIPGVR [K].gHAVGDIPGVR.[F] N-Term(TMT6plex) 5 Q9CWI9 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1 Q497E1; Q9CSN9; Q9CWI9; Q9CZI5; P62267 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 (Fragment) OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=1 SV=3 0 2 2 0.5742 0 1 1 1 653.87549 1306.7437 1306.7429 0.61 0.0004 0/0 0 0 18679396 HCD 30 MS2 5.994465 828.1 110 60.2924 17407 17407 17402 QEplus033719.raw F4 842.4 642.2 870.9 713.5 934 965.5 481 3.57 1 FALSE 1.14E-05 1.01E-09 1.806 -250 79637 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MESWDR [R].mESWDR.[E] N-Term(TMT6plex) 1 Q9CQJ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Mus musculus OX=10090 GN=Ndufb9 PE=1 SV=3 Q9CQJ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Mus musculus OX=10090 GN=Ndufb9 PE=1 SV=3 0 2 2 0.4779 0 1 1 1 526.75592 1052.50456 1052.50325 1.25 0.00066 0/0 0 0 12639784 HCD 30 MS2 54.1031 1468.3 110 60.2949 17408 17408 17402 QEplus033719.raw F4 1472.3 1003.3 1585.7 1670.7 1190.2 1887.4 56 2.26 1 FALSE 0.004641 0.0821 0.056 -250 79654 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATLSSIR [R].aTLSSIR.[LH] N-Term(TMT6plex) 3 Q5M9N5 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1 Q5M9N5; F6Z0X0; Q5M9J8 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1; 60S ribosomal protein L28 (Fragment) OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1; 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1 0 2 2 0.4316 0 1 1 1 488.80341 976.59953 976.59886 0.69 0.00034 0/0 0 0 350803552 HCD 30 MS2 17.21825 645.2 2.96 60.2996 17410 17410 17402 QEplus033719.raw F4 576.8 535.6 749.9 604.6 592.3 812.1 35 2.85 1 FALSE 0.00155 0.02343 0.255 -250 79664 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LFKPHQAPAR [K].lFkPHQAPAR.[M] N-Term(TMT6plex); K3(TMT6plex) 5 Q3THW7 Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1 Q3THW7; Q8BTX5; Q5M9L0; Q3TII2; Q3TIK5 Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus OX=10090 GN=Eif3h PE=2 SV=1 0 4 4 0.5535 0 1 1 1 406.50308 1622.9905 1622.9895 0.61 0.00025 0/0 0 0 17431586 HCD 30 MS2 44.17435 562.5 51.191 60.3019 17411 17411 17402 QEplus033719.raw F4 551.4 487.8 625.6 438.2 636.1 636.1 264 3.18 1 FALSE 1.14E-05 0.0009462 0.667 -250 79672 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRPVATQVK [K].vRPVATQVk.[T] N-Term(TMT6plex); K9(TMT6plex) 4 O08784 Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 F6R3V4; O08784; Q6PFZ6; H3BL37 Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 0 3 3 0.4538 0 1 1 1 485.98563 1455.94233 1455.94115 0.8 0.00039 0/0 0 0 15681326 HCD 30 MS2 38.25783 1163.8 107.062 60.3043 17412 17412 17402 QEplus033719.raw F4 1181 995.6 1242.2 1031.5 1204.4 1328.4 165 3.46 1 FALSE 0.001567 0.02398 0.251 -250 79679 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVLPVTCHR [K].aVLPVTcHR.[D] N-Term(TMT6plex); C7(Carbamidomethyl) 7 A2A9M4 Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=2 A2A9M4; A2A9M5; Q8R1A4-2; A0A0U1RNK7; E9PX48; Q8R1A4; Q7TPP0 Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=2; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=1; Isoform 2 of Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=1; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=2; Dedicator of cytokinesis protein 7 OS=Mus musculus OX=10090 GN=Dock7 PE=1 SV=3; Dock7 protein (Fragment) OS=Mus musculus OX=10090 GN=Dock7 PE=2 SV=3 0 3 3 0.6544 0 1 1 1 427.91519 1281.73102 1281.72989 0.88 0.00038 0/0 0 0 8638077 HCD 30 MS2 19.68873 506.8 110 60.3116 17414 17414 17413 QEplus033719.raw F4 633.1 312.5 464.9 492 521.2 616.9 343 3.27 1 FALSE 1.14E-05 1.24E-05 1.029 -250 79687 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KEGSDGTLATSK [K].kEGSDGTLATSk.[T] N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex) 2 Q9DBG7 Signal recognition particle receptor subunit alpha OS=Mus musculus OX=10090 GN=Srpra PE=1 SV=1 A0A1L1SSI7; Q9DBG7 Signal recognition particle receptor ('docking protein') (Fragment) OS=Mus musculus OX=10090 GN=Srpr PE=1 SV=1; Signal recognition particle receptor subunit alpha OS=Mus musculus OX=10090 GN=Srpra PE=1 SV=1 1 3 3 0.5883 0 1 1 1 627.70142 1881.08969 1881.08962 0.04 0.00003 0/0 0 0 2163854.5 HCD 30 MS2 0 440.8 110 60.3141 17415 17415 17413 QEplus033719.raw F4 416 386.4 457.1 397.3 550.5 437.2 380 5.15 1 FALSE 1.14E-05 6.66E-13 2.41 -250 79719 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELECIR [R].eLEcIR.[E] N-Term(TMT6plex); C4(Carbamidomethyl) 1 B2RRH9 Glutamine amidotransferase OS=Mus musculus OX=10090 GN=Gmps PE=1 SV=1 B2RRH9 Glutamine amidotransferase OS=Mus musculus OX=10090 GN=Gmps PE=1 SV=1 0 2 2 0.2617 0 1 1 1 524.78693 1048.56658 1048.56585 0.7 0.00036 0/0 0 0 13955075 HCD 30 MS2 35.82025 1296.3 110 60.3259 17420 17420 17413 QEplus033719.raw F4 1464.7 1050.5 1333.7 1104.6 1545 1279.5 254 2.14 1 FALSE 0.005324 0.09074 0.032 -250 79722 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEEQLQK [R].eAEEQLQk.[L] N-Term(TMT6plex); K8(TMT6plex) 25 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5 0 1 1 1 716.90753 1432.80779 1432.80478 2.1 0.0015 0/0 0 0 8097862 HCD 30 MS2 20.8781 551.1 110 60.3284 17421 17421 17413 QEplus033719.raw F4 657.3 480.6 557.3 446.4 593.8 571 458 3.2 2 FALSE 1.14E-05 6.83E-05 0.889 -250 79728 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QMVEHGGFYR [R].qMVEHGGFYR.[T] N-Term(TMT6plex) 2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q80U36; Q9JHU4 MKIAA0325 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 3 3 0.7045 0 1 1 1 484.91113 1452.71885 1452.72553 -4.6 -0.00223 0/0 0 0 6220027 HCD 30 MS2 50.77806 1080.3 110 60.3309 17422 17422 17413 QEplus033719.raw F4 1161.5 834.9 1139.2 979 1109.3 1257.8 122 3.52 1 FALSE 0.0005556 0.008271 0.434 -250 79736 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSTWSGESK [K].tSTWSGESk.[T] N-Term(TMT6plex); K9(TMT6plex) 6 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 2 2 0.5259 0 1 1 1 720.89075 1440.77422 1440.77348 0.51 0.00037 0/0 0 0 4069964 HCD 30 MS2 0 449.6 110 60.3334 17423 17423 17413 QEplus033719.raw F4 492.9 447.3 489.3 311.1 548.9 408.2 312 3.48 1 FALSE 1.14E-05 0.0002493 0.781 -250 79744 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTPNIK [K].dTPNIk.[W] N-Term(TMT6plex); K6(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; Q3TZL3; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.0758 0 1 1 1 573.35022 1145.69316 1145.69304 0.1 0.00006 0/0 0 0 82664688 HCD 30 MS2 25.45063 1033.2 19.833 60.343 17426 17426 17424 QEplus033719.raw F4 1070.7 622.2 982.8 1377.5 837.3 1308.9 342 2.11 2 FALSE 0.004576 0.08102 0.059 -250 79753 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGAGVGSMTK [R].gGAGVGSMTk.[I] N-Term(TMT6plex); K10(TMT6plex) 6 Q5M9P3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1 D3YUT3; D3Z722; D3Z5R8; Q5M9P3; Q9CZX8; D3YUG3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=2; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=1; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=8; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=3; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=8 0 2 2 0.5556 0 1 1 1 661.87878 1322.75029 1322.75024 0.04 0.00002 0/0 0 0 62756468 HCD 30 MS2 57.31294 976.7 18.338 60.3453 17427 17427 17424 QEplus033719.raw F4 1029.3 856.2 1075.8 767.9 1094.7 1036.3 455 2.79 1 FALSE 1.14E-05 3.04E-07 1.336 -250 79760 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NANSDVCAAALR [R].nANSDVcAAALR.[G] N-Term(TMT6plex); C7(Carbamidomethyl) 1 A0A158SIT8 Modulator of non-genomic activity of estrogen receptor OS=Mus musculus OX=10090 GN=Pelp1 PE=3 SV=1 A0A158SIT8 Modulator of non-genomic activity of estrogen receptor OS=Mus musculus OX=10090 GN=Pelp1 PE=3 SV=1 0 2 2 0.7135 0 1 1 1 745.88306 1490.75884 1490.75829 0.37 0.00027 0/0 0 0 3927105.5 HCD 30 MS2 0 177.8 110 60.3501 17429 17429 17424 QEplus033719.raw F4 183.3 159.2 193.7 168.9 189.6 172.4 213 3.7 1 FALSE 1.14E-05 6.12E-11 2.038 -250 79765 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALIVDESCRR [K].aLIVDEScRR.[-] N-Term(TMT6plex); C8(Carbamidomethyl) 5 B2RWV7 2310014H01Rik protein OS=Mus musculus OX=10090 GN=Ppp1r18 PE=2 SV=1 B2RWV7; Q8BQ30; A0A087WRI9; B7ZND7; Q3U3A9 2310014H01Rik protein OS=Mus musculus OX=10090 GN=Ppp1r18 PE=2 SV=1; Phostensin OS=Mus musculus OX=10090 GN=Ppp1r18 PE=1 SV=1; Phostensin OS=Mus musculus OX=10090 GN=Ppp1r18 PE=1 SV=1; 2310014H01Rik protein OS=Mus musculus OX=10090 GN=Ppp1r18 PE=2 SV=1; Phostensin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ppp1r18 PE=2 SV=1 1 3 3 0.6098 0 1 1 1 483.26755 1447.78809 1447.78886 -0.53 -0.00026 0/0 0 0 17727870 HCD 30 MS2 42.49357 909.4 98.087 60.3524 17430 17430 17424 QEplus033719.raw F4 906.2 802.3 1028.4 700.4 1077.5 941.4 369 3.46 1 FALSE 1.14E-05 4.01E-05 0.933 -250 79809 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MKDTDSEEEIR [K].mkDTDSEEEIR.[E] N-Term(TMT6plex); K2(TMT6plex) 5 P0DP27 Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1 A0A1Y7VK66; A0A3Q4EHJ0; P0DP27; Q9D6P8; Q3UKW2 Calmodulin-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Calml3 PE=1 SV=1; Calmodulin-1 OS=Mus musculus OX=10090 GN=Calm1 PE=1 SV=1; Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1; Calmodulin-like protein 3 OS=Mus musculus OX=10090 GN=Calml3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=1 SV=1 1 2 2 0.5648 0 1 1 1 905.96863 1810.92998 1810.9257 2.36 0.00214 0/0 0 0 3739549.5 HCD 30 MS2 20.38714 130.8 110 60.372 17437 17437 17435 QEplus033719.raw F4 127.3 120.2 146.7 127.9 133.2 129.3 265 3.24 1 FALSE 1.14E-05 5.10E-07 1.293 -250 79815 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHTALLK [R].eHTALLk.[I] N-Term(TMT6plex); K7(TMT6plex) 2 O55142 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2 O55142; Q8BQV7 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1 0 3 3 0.4615 0 1 1 1 423.93597 1269.79337 1269.79309 0.22 0.00009 0/0 0 0 31357702 HCD 30 MS2 18.12189 573.2 29.857 60.3742 17438 17438 17435 QEplus033719.raw F4 640.1 443 638 429.9 646.3 642.2 179 3.77 1 FALSE 5.44E-05 0.002477 0.578 -250 79832 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGAGVGSMTK [R].gGAGVGSMTk.[I] N-Term(TMT6plex); K10(TMT6plex) 6 Q5M9P3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1 D3YUT3; D3Z722; D3Z5R8; Q5M9P3; Q9CZX8; D3YUG3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=2; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=1; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=8; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=3; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=8 0 3 3 0.607 0 1 1 1 441.58905 1322.7526 1322.75024 1.78 0.00079 0/0 0 0 19599394 HCD 30 MS2 25.21338 673.5 65.058 60.3787 17440 17440 17435 QEplus033719.raw F4 769.8 516.3 701.3 496 850.1 707.7 323 3.69 1 FALSE 1.14E-05 4.37E-05 0.926 -250 79837 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAVTYTEHAK [R].dAVTYTEHAk.[R] N-Term(TMT6plex); K10(TMT6plex) 2 P62806 Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2 Q61667; P62806 Histone H4 (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2 0 4 4 0.5508 0 1 1 1 398.97299 1592.87014 1592.86844 1.06 0.00042 0/0 0 0 13246648 HCD 30 MS2 24.60817 486.5 110 60.3812 17441 17441 17435 QEplus033719.raw F4 429.9 537.5 546.4 320.8 679.7 404.8 387 3.25 1 FALSE 1.14E-05 0.0003253 0.759 -250 79844 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSAQGNVYVK [K].nSAQGNVYVk.[C] N-Term(TMT6plex); K10(TMT6plex) 5 Q3UXT6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1 Q3UXT6; Q8VH51; Q0VGU9; Q8VH51-2; Q3UZ51 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1; RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2; Rbm39 protein OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1; Isoform 2 of RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39; RBM39linker domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1 0 2 2 0.462 0 1 1 1 769.44189 1537.87651 1537.87386 1.72 0.00132 0/0 0 0 5131589 HCD 30 MS2 0 337.6 110 60.3838 17442 17442 17435 QEplus033719.raw F4 360 346.8 381.9 230 396.4 310.5 398 3.68 1 FALSE 1.14E-05 3.68E-08 1.51 -250 79851 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MKDTDSEEEIR [K].mkDTDSEEEIR.[E] N-Term(TMT6plex); K2(TMT6plex) 5 P0DP27 Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1 A0A1Y7VK66; A0A3Q4EHJ0; P0DP27; Q9D6P8; Q3UKW2 Calmodulin-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Calml3 PE=1 SV=1; Calmodulin-1 OS=Mus musculus OX=10090 GN=Calm1 PE=1 SV=1; Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1; Calmodulin-like protein 3 OS=Mus musculus OX=10090 GN=Calml3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=1 SV=1 1 3 3 0.4448 0 1 1 1 604.31396 1810.92734 1810.9257 0.91 0.00055 0/0 0 0 52535504 HCD 30 MS2 26.0924 986 32.767 60.386 17443 17443 17435 QEplus033719.raw F4 967.5 959.6 1051 896.7 1053.6 987.8 272 3.08 1 FALSE 1.14E-05 5.90E-05 0.901 -250 79865 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSLSYDCIGR [R].hSLSYDcIGR.[L] N-Term(TMT6plex); C7(Carbamidomethyl) 6 Q8JZK9 "Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Hmgcs1 PE=1 SV=1" Q8JZK9; Q8K0I5; Q3UWQ9; Q3UJ70; Q3UKE7; Q8C5F4 "Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Hmgcs1 PE=1 SV=1; 3-hydroxy-3-methylglutaryl coenzyme A synthase OS=Mus musculus OX=10090 GN=Hmgcs1 PE=2 SV=1; 3-hydroxy-3-methylglutaryl coenzyme A synthase OS=Mus musculus OX=10090 GN=Hmgcs1 PE=2 SV=1; 3-hydroxy-3-methylglutaryl coenzyme A synthase OS=Mus musculus OX=10090 GN=Hmgcs1 PE=2 SV=1; 3-hydroxy-3-methylglutaryl coenzyme A synthase OS=Mus musculus OX=10090 GN=Hmgcs1 PE=2 SV=1; 3-hydroxy-3-methylglutaryl coenzyme A synthase OS=Mus musculus OX=10090 GN=Hmgcs1 PE=2 SV=1" 0 3 3 0.7411 0 1 1 1 479.57651 1436.71497 1436.71536 -0.27 -0.00013 0/0 0 0 11943724 HCD 30 MS2 29.61332 806.5 110 60.3908 17445 17445 17435 QEplus033719.raw F4 1044.2 552.5 865.1 713.7 829.7 834 151 4.48 1 FALSE 1.14E-05 7.65E-05 0.879 -250 79873 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHPAVVIR [K].vHPAVVIR.[Q] N-Term(TMT6plex) 1 P62830 60S ribosomal protein L23 OS=Mus musculus OX=10090 GN=Rpl23 PE=1 SV=1 P62830 60S ribosomal protein L23 OS=Mus musculus OX=10090 GN=Rpl23 PE=1 SV=1 0 3 3 0.5488 0 1 1 1 373.91159 1119.72022 1119.71998 0.21 0.00008 0/0 0 0 41877332 HCD 30 MS2 27.61626 254.8 22.721 60.3981 17447 17447 17446 QEplus033719.raw F4 249.6 171.2 273.7 222.6 296 315.6 149 3.28 1 FALSE 0.0001187 0.003156 0.553 -250 79883 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEISGDLAR [K].sEISGDLAR.[L] N-Term(TMT6plex) 7 P14824; Q99JX6 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3;Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 Q3V2Z4; P14824; F8WIT2; Q3UI56; Q8CEX0; Q99JX6; Q3UDK4 Annexin OS=Mus musculus OX=10090 PE=2 SV=1; Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 0 2 2 0.5395 0 1 1 1 588.82587 1176.64446 1176.64218 1.93 0.00114 0/0 0 0 13025211 HCD 30 MS2 7.877256 698.4 110 60.4006 17448 17448 17446 QEplus033719.raw F4 727.5 496.5 707.8 685.8 759.6 813.1 288 3.04 2 FALSE 1.14E-05 1.50E-06 1.204 -250 79890 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEEQLQK [R].eAEEQLQk.[L] N-Term(TMT6plex); K8(TMT6plex) 25 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.2818 0 1 1 1 478.27518 1432.81098 1432.80478 4.33 0.00207 0/0 0 0 15437800 HCD 30 MS2 44.78281 848.6 76.967 60.4051 17450 17450 17446 QEplus033719.raw F4 929.5 734.4 939.4 672.3 947.1 869 496 3.3 2 FALSE 0.001083 0.014 0.345 -250 79910 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESQYIK [K].eSQYIk.[Y] N-Term(TMT6plex); K6(TMT6plex) 1 B1AYC9 "Amyloid beta (A4) protein-binding, family B, member 1 interacting protein OS=Mus musculus OX=10090 GN=Apbb1ip PE=1 SV=1" B1AYC9 "Amyloid beta (A4) protein-binding, family B, member 1 interacting protein OS=Mus musculus OX=10090 GN=Apbb1ip PE=1 SV=1" 0 2 2 0.1189 0 1 1 1 613.36493 1225.72258 1225.71926 2.71 0.00166 0/0 0 0 3477732 HCD 30 MS2 0 678.4 110 60.4126 17453 17453 17446 QEplus033719.raw F4 683.5 686.8 629.4 500.8 1003.4 566.5 263 2.27 1 FALSE 0.004441 0.07976 0.062 -250 79941 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESRPVIVK [R].eSRPVIVk.[E] N-Term(TMT6plex); K8(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.4346 0 1 1 1 462.63531 1385.89139 1385.88806 2.41 0.00111 0/0 0 0 15724635 HCD 30 MS2 26.14208 1036.8 76.556 60.4267 17458 17458 17457 QEplus033719.raw F4 1268.3 419.3 855 1306.9 847.3 1524.2 172 2.6 2 FALSE 0.001108 0.01458 0.338 -250 79952 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EKYEITEQR [K].ekYEITEQR.[K] N-Term(TMT6plex); K2(TMT6plex) 2 P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 Q3UFI4; P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=2 SV=1; 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 1 3 3 0.5277 0 1 1 1 551.979 1653.92246 1653.92121 0.76 0.00042 0/0 0 0 27015880 HCD 30 MS2 13.1503 1233 82.241 60.4315 17460 17460 17457 QEplus033719.raw F4 1278.4 1165 1378.2 1055.2 1303 1218.4 391 2.71 1 FALSE 1.14E-05 2.52E-05 0.971 -250 79958 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITGCTSPGK [K].iTGcTSPGk.[T] N-Term(TMT6plex); C4(Carbamidomethyl); K9(TMT6plex) 4 P80315 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3 P80315; Q3TII0; Q3UJZ8; G5E839 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1 0 3 3 0.4208 0 1 1 1 460.26199 1378.77143 1378.77646 -3.65 -0.00168 0/0 0 0 21034820 HCD 30 MS2 59.83059 1083.7 35.644 60.4337 17461 17461 17457 QEplus033719.raw F4 1370.3 742.9 1157.2 919.6 1207.9 1104.4 447 2.21 1 FALSE 0.004181 0.07655 0.071 -250 79969 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FRDGPPLR [R].fRDGPPLR.[G] N-Term(TMT6plex) 3 Q80U88 Eukaryotic translation initiation factor 4H (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0038 PE=4 SV=3 Q80U88; Q9WUK2-2; Q9WUK2 Eukaryotic translation initiation factor 4H (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0038 PE=4 SV=3; Isoform Short of Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h; Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h PE=1 SV=3 1 2 2 0.4491 0 1 1 1 593.84827 1186.68926 1186.68941 -0.13 -0.00008 0/0 0 0 5805967 HCD 30 MS2 0 394.1 110 60.4387 17463 17463 17457 QEplus033719.raw F4 392.8 330.4 418 308.7 467.3 447.6 375 2.16 1 FALSE 0.0006294 0.009348 0.415 -250 79983 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHTALLK [R].eHTALLk.[I] N-Term(TMT6plex); K7(TMT6plex) 2 O55142 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2 O55142; Q8BQV7 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1 0 2 2 0.53 0 1 1 1 635.39954 1269.7918 1269.79309 -1.02 -0.00065 0/0 0 0 13560383 HCD 30 MS2 21.17608 1053.5 110 60.4438 17465 17465 17457 QEplus033719.raw F4 1059.3 895.9 1165.1 872.6 1176.7 1151.7 166 2.83 1 FALSE 0.000565 0.008612 0.428 -250 79993 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FTSAGQASK [R].fTSAGQASk.[N] N-Term(TMT6plex); K9(TMT6plex) 3 Q921F4 Heterogeneous nuclear ribonucleoprotein L-like OS=Mus musculus OX=10090 GN=Hnrnpll PE=1 SV=3 Q921F4; Q9CSH0; Q921F4-5 Heterogeneous nuclear ribonucleoprotein L-like OS=Mus musculus OX=10090 GN=Hnrnpll PE=1 SV=3; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpll PE=2 SV=1; Isoform 3 of Heterogeneous nuclear ribonucleoprotein L-like OS=Mus musculus OX=10090 GN=Hnrnpll 0 2 2 0.525 0 1 1 1 677.88965 1354.77202 1354.77309 -0.79 -0.00053 0/0 0 0 7701705.5 HCD 30 MS2 8.718052 715.9 110 60.4488 17467 17467 17457 QEplus033719.raw F4 746.7 656.4 757.1 548.8 918.5 668.1 349 3.6 1 FALSE 1.14E-05 1.68E-06 1.195 -250 79999 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITPAHDQNDYEVGQR [K].iTPAHDQNDYEVGQR.[H] N-Term(TMT6plex) 5 Q7TPT7 Valyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1 Q3U3D3; G3UY93; Q3TII4; Q7TPT7; Q9Z1Q9 Valyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1; Valyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Vars PE=1 SV=1; Valyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1; Valyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1; Valine--tRNA ligase OS=Mus musculus OX=10090 GN=Vars1 PE=1 SV=1 0 3 3 0.8197 0 1 1 1 657.99634 1971.97446 1971.97218 1.15 0.00076 0/0 0 0 9820719 HCD 30 MS2 19.91095 338.8 110 60.4561 17469 17469 17468 QEplus033719.raw F4 347.9 269.6 318.6 359.5 350.2 387.1 167 5.99 1 FALSE 1.14E-05 2.13E-15 2.884 -250 80012 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FADGSIR [R].fADGSIR.[T] N-Term(TMT6plex) 1 Q8K2B3 "Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Mus musculus OX=10090 GN=Sdha PE=1 SV=1" Q8K2B3 "Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Mus musculus OX=10090 GN=Sdha PE=1 SV=1" 0 2 2 0.4048 0 1 1 1 497.77969 994.55211 994.55191 0.2 0.0001 0/0 0 0 40519444 HCD 30 MS2 28.53556 875.3 23.35 60.4609 17471 17471 17468 QEplus033719.raw F4 963.4 685 928.5 876.5 854.8 943.4 134 2.52 1 FALSE 0.0004793 0.007673 0.445 -250 80026 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NALIHK [R].nALIHk.[S] N-Term(TMT6plex); K6(TMT6plex) 6 E9QNN1 DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1 O70133-2; O70133-3; Q3TF92; E9QNN1; A0A087WPL5; O70133 Isoform 2 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; Isoform 3 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; OB_NTP_bind domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dhx9 PE=2 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=2 0 3 3 0.3082 0 1 1 1 385.25363 1153.74634 1153.74575 0.51 0.0002 0/0 0 0 18643192 HCD 30 MS2 12.8593 484.6 69.253 60.4654 17473 17473 17468 QEplus033719.raw F4 637.5 369.7 461.3 337.8 656.4 445.1 70 3.05 1 FALSE 0.00079 0.01106 0.388 -250 80040 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FEDCSSAK [R].fEDcSSAk.[T] N-Term(TMT6plex); C4(Carbamidomethyl); K8(TMT6plex) 5 Q3UKJ6 RNA helicase OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1 A0A0G2JG10; Q497W9; Q3UKJ6; Q3TFE5; Q3UDX4 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1; DEAH (Asp-Glu-Ala-His) box polypeptide 15 OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Dhx15 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Dhx15 PE=2 SV=1 0 2 2 0.3919 0 1 1 1 701.35895 1401.71062 1401.70844 1.56 0.00109 0/0 0 0 6837989 HCD 30 MS2 81.00626 886.8 105.678 60.4728 17476 17476 17468 QEplus033719.raw F4 862.7 794 925 632.9 1190.2 915.9 161 1.48 1 FALSE 0.0001603 0.003516 0.541 -250 80046 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVNDNATYCR [K].iVNDNATYcR.[L] N-Term(TMT6plex); C9(Carbamidomethyl) 5 Q3UJZ7 Nop domain-containing protein OS=Mus musculus OX=10090 GN=Nop56 PE=2 SV=1 E0CXZ0; F6USW7; Q3UJZ7; Q3USZ5; Q9D6Z1 Nucleolar protein 56 OS=Mus musculus OX=10090 GN=Nop56 PE=1 SV=1; Nucleolar protein 56 (Fragment) OS=Mus musculus OX=10090 GN=Nop56 PE=1 SV=1; Nop domain-containing protein OS=Mus musculus OX=10090 GN=Nop56 PE=2 SV=1; Nop domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Nop56 PE=2 SV=1; Nucleolar protein 56 OS=Mus musculus OX=10090 GN=Nop56 PE=1 SV=2 0 2 2 0.72 0 1 1 1 727.86798 1454.72869 1454.72593 1.89 0.00138 0/0 0 0 6776272.5 HCD 30 MS2 41.03059 428.6 110 60.4753 17477 17477 17468 QEplus033719.raw F4 435.8 418.4 495 373.6 416.5 432.1 166 3.25 1 FALSE 1.14E-05 9.31E-07 1.243 -250 80088 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDVVPK [R].gDVVPk.[D] N-Term(TMT6plex); K6(TMT6plex) 11 P68369; Q52L87; A0A0A0MQA5 Tubulin alpha-1A chain OS=Mus musculus OX=10090 GN=Tuba1a PE=1 SV=1;Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=1 SV=1;Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1 Q5FW91; Q3TIZ0; Q9JJZ2; Q99KA2; Q3UX10; P68369; Q9D9Y2; P05213; Q52L87; A0A0A0MQA5; P68368 Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba3a PE=1 SV=1; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=2 SV=1; Tubulin alpha-8 chain OS=Mus musculus OX=10090 GN=Tuba8 PE=1 SV=1; Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba1b PE=2 SV=1; Tubulin alpha chain-like 3 OS=Mus musculus OX=10090 GN=Tubal3 PE=2 SV=2; Tubulin alpha-1A chain OS=Mus musculus OX=10090 GN=Tuba1a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Tubulin alpha-1B chain OS=Mus musculus OX=10090 GN=Tuba1b PE=1 SV=2; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=1 SV=1; Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1; Tubulin alpha-4A chain OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1 0 3 3 0.0642 0 1 1 1 358.23038 1072.67658 1072.67667 -0.08 -0.00003 0/0 0 0 19347352 HCD 30 MS2 19.50339 529.2 53.005 60.4945 17484 17484 17479 QEplus033719.raw F4 589.7 422.2 545.6 403.7 685.7 528.2 149 1.87 3 FALSE 0.009204 0.168 -0.106 -250 80103 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAPGGGNKVPQK [R].sAPGGGNkVPQk.[K] N-Term(TMT6plex); K8(TMT6plex); K12(TMT6plex) 9 Q5SQB7 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1 Q5SQB7; Q5SQB0; Q8BSZ3; Q5BL09; Q5U438; Q9DAY9; Q3UDA7; Q5SQB5; Q3U536 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Npm1 protein OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1 1 3 3 0.5548 0 1 1 1 609.70685 1827.10599 1827.10554 0.25 0.00015 0/0 0 0 16639292 HCD 30 MS2 19.18016 1144.6 110 60.4992 17486 17486 17479 QEplus033719.raw F4 1159.3 1176.1 1219.1 921.6 1252 1139.5 296 2.83 1 FALSE 0.0003496 0.006733 0.463 -250 80108 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVLMSER [K].aVLMSER.[V] N-Term(TMT6plex) 4 A0A0R4J140 Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=1 A0A0R4J140; Q5SW19-3; Z4YLI8; Q5SW19 Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=1; Isoform 3 of Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh; Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=1; Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=2 0 2 2 0.1905 0 1 1 1 517.797 1034.58672 1034.58658 0.13 0.00007 0/0 0 0 16482163 HCD 30 MS2 44.84583 1258.9 110 60.5017 17487 17487 17479 QEplus033719.raw F4 1277.6 1041.9 1494.8 1044.3 1272.9 1421.9 232 2.31 1 FALSE 0.0002909 0.005812 0.483 -250 80117 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVHPAVVIR [K].kVHPAVVIR.[Q] N-Term(TMT6plex); K1(TMT6plex) 1 P62830 60S ribosomal protein L23 OS=Mus musculus OX=10090 GN=Rpl23 PE=1 SV=1 P62830 60S ribosomal protein L23 OS=Mus musculus OX=10090 GN=Rpl23 PE=1 SV=1 1 4 4 0.6199 0 1 1 1 369.99994 1476.97793 1476.97787 0.04 0.00001 0/0 0 0 16318893 HCD 30 MS2 6.763922 305 70.714 60.504 17488 17488 17479 QEplus033719.raw F4 291.3 262.8 459.5 271.3 154.2 391 98 3.92 1 FALSE 1.14E-05 9.91E-05 0.858 -250 80131 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVQEAEK [R].mVQEAEk.[Y] N-Term(TMT6plex); K7(TMT6plex) 16 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 0 2 2 0.3795 0 1 1 1 646.86847 1292.72966 1292.72844 0.94 0.00061 0/0 0 0 82502248 HCD 30 MS2 13.68886 1042.3 20.92 60.5136 17491 17491 17490 QEplus033719.raw F4 1016.3 714.7 1109.1 945.1 1292.4 1176 412 3.03 1 FALSE 0.0005373 0.008173 0.436 -250 80139 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLEVEEEEQR [R].sLEVEEEEQR.[I] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.6432 0 1 1 1 738.87299 1476.7387 1476.73793 0.52 0.00038 0/0 0 0 22714312 HCD 30 MS2 0 558.2 110 60.5161 17492 17492 17490 QEplus033719.raw F4 626.6 298.6 670.5 541.2 421.8 790.8 140 4.26 1 FALSE 1.14E-05 3.52E-07 1.323 -250 80158 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVTNSPFK [K].hVTNSPFk.[I] N-Term(TMT6plex); K8(TMT6plex) 3 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q3UXJ8; Q8VHX6-2; Q8VHX6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flnc PE=2 SV=1; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 3 3 0.6272 0 1 1 1 463.27524 1387.81116 1387.80981 0.98 0.00045 0/0 0 0 21308990 HCD 30 MS2 46.05262 1004.9 63.495 60.5228 17495 17495 17490 QEplus033719.raw F4 1286.4 392.4 765.8 1757.1 567.6 1260.4 399 3.46 1 FALSE 1.14E-05 8.05E-05 0.875 -250 80186 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IRQNEINNPK [R].iRQNEINNPk.[F] N-Term(TMT6plex); K10(TMT6plex) 2 Q8K4Z5 Splicing factor 3A subunit 1 OS=Mus musculus OX=10090 GN=Sf3a1 PE=1 SV=1 Q3TVM1; Q8K4Z5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Sf3a1 PE=2 SV=1; Splicing factor 3A subunit 1 OS=Mus musculus OX=10090 GN=Sf3a1 PE=1 SV=1 1 3 3 0.3195 0 1 1 1 562.00269 1683.9935 1683.99062 1.71 0.00096 0/0 0 0 6047872.5 HCD 30 MS2 0 688.9 110 60.5303 17498 17498 17490 QEplus033719.raw F4 719.5 536.6 747.7 642.7 711.1 775.8 337 3.85 1 FALSE 1.14E-05 5.00E-05 0.914 -250 80206 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLEAQAEK [K].sLEAQAEk.[Y] N-Term(TMT6plex); K8(TMT6plex) 15 G5E8R1; A0A0R4J1P2 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1 E9Q455; G5E8R1; Q8BSH3; D3Z6I8; E9Q452; F8WID5; E9Q454; A0A0R4J1P2; P21107; G5E8R0; Q564G1; B7ZNL3; E9Q7Q3; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=3; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 0 2 2 0.4574 0 1 1 1 667.3902 1333.77312 1333.77275 0.28 0.00018 0/0 0 0 153021904 HCD 30 MS2 5.030023 828.5 12.406 60.5426 17502 17502 17501 QEplus033719.raw F4 798.3 628.6 897.7 741.4 925 980 538 3.52 2 FALSE 1.14E-05 0.0003221 0.759 -250 80215 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLQDIK [K].hLQDIk.[V] N-Term(TMT6plex); K6(TMT6plex) 4 Q8C1W9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nap1l4 PE=2 SV=1 Q8C1W9; B7ZNL2; Q78ZA7; A0A140LJB5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nap1l4 PE=2 SV=1; Nap1l4 protein OS=Mus musculus OX=10090 GN=Nap1l4 PE=1 SV=1; Nucleosome assembly protein 1-like 4 OS=Mus musculus OX=10090 GN=Nap1l4 PE=1 SV=1; Nucleosome assembly protein 1-like 4 (Fragment) OS=Mus musculus OX=10090 GN=Nap1l4 PE=1 SV=1 0 3 3 0.1595 0 1 1 1 404.58881 1211.75187 1211.75123 0.53 0.00021 0/0 0 0 37324504 HCD 30 MS2 15.55155 599.5 37.089 60.5449 17503 17503 17501 QEplus033719.raw F4 687.1 429 588.3 547.7 670.2 674.8 250 3.26 1 FALSE 5.44E-05 0.001719 0.613 -250 80224 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VMSNLDSNR [K].vMSNLDSNR.[D] N-Term(TMT6plex) 2 A0A0G2JGD2 Protein S100-A4 (Fragment) OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1 A0A0G2JGD2; P07091 Protein S100-A4 (Fragment) OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1; Protein S100-A4 OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1 0 2 2 0.5217 0 1 1 1 632.8299 1264.65251 1264.6517 0.64 0.00041 0/0 0 0 65437964 HCD 30 MS2 49.58466 1061.3 18.572 60.5472 17504 17504 17501 QEplus033719.raw F4 1056.1 923.9 1156.4 860.7 1218.8 1151.7 249 2.53 1 FALSE 1.14E-05 0.0008943 0.672 -250 80232 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVSDYDGK [K].sVSDYDGk.[L] N-Term(TMT6plex); K8(TMT6plex) 13 P09103 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2 P09103; Q3URP6; Q3TWE3; Q3U738; Q3TT76; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; Q3UA23; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 0 2 2 0.6752 0 1 1 1 664.8576 1328.70793 1328.70982 -1.42 -0.00094 0/0 0 0 16652267 HCD 30 MS2 10.80783 877.4 110 60.5497 17505 17505 17501 QEplus033719.raw F4 982.3 765.4 845.1 840.4 1013.4 817.7 200 3.11 1 FALSE 1.14E-05 0.000307 0.763 -250 80252 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QATENAKEEVK [K].qATENAkEEVk.[R] N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex) 2 Q9D8N0 Elongation factor 1-gamma OS=Mus musculus OX=10090 GN=Eef1g PE=1 SV=3 Q8R1N8; Q9D8N0 Eef1g protein OS=Mus musculus OX=10090 GN=Eef1g PE=2 SV=1; Elongation factor 1-gamma OS=Mus musculus OX=10090 GN=Eef1g PE=1 SV=3 1 3 3 0.5606 0 1 1 1 645.37726 1934.11722 1934.11617 0.55 0.00035 0/0 0 0 71485424 HCD 30 MS2 17.24217 1035 26.549 60.5567 17508 17508 17501 QEplus033719.raw F4 1062.1 754.8 1072.4 896.7 1124.6 1299.7 472 2.64 1 FALSE 1.14E-05 6.91E-06 1.078 -250 80261 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TELATQEK [R].tELATQEk.[V] N-Term(TMT6plex); K8(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.4517 0 1 1 1 689.40381 1377.80034 1377.79897 1 0.00069 0/0 0 0 54411256 HCD 30 MS2 1.543439 893.8 28.505 60.559 17509 17509 17501 QEplus033719.raw F4 928.2 737.8 906.3 814.5 977.6 998.4 425 2.9 2 FALSE 1.14E-05 0.0007005 0.693 -250 80268 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMAELTR [K].eMAELTR.[L] N-Term(TMT6plex) 4 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q62261; A0A0A0MQG2; Q5DTR4; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; MKIAA4049 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 2 2 0.5059 0 1 1 1 539.79199 1078.57671 1078.57641 0.28 0.00015 0/0 0 0 24111788 HCD 30 MS2 16.53339 1191.2 110 60.5615 17510 17510 17501 QEplus033719.raw F4 1267.4 1000.3 1389.9 984.6 1248.1 1257 214 2.55 2 FALSE 0.0002814 0.005676 0.486 -250 80279 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTEDELDK [K].gTEDELDk.[Y] N-Term(TMT6plex); K8(TMT6plex) 13 E9Q5J9; A0A0R4J1P2; E9Q450 Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 Q8BSH3; E9Q452; F8WID5; S4R2U0; E9Q454; E9Q5J9; A0A0R4J1P2; P21107; E9Q450; Q8K0Z5; Q564G1; Q8BP43; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=3; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 3, gamma OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 0 2 2 0.0926 0 1 1 1 682.86938 1364.73149 1364.73095 0.4 0.00027 0/0 0 0 197091776 HCD 30 MS2 6.622035 767.4 9.258 60.5711 17513 17513 17512 QEplus033719.raw F4 768 531.7 793.3 699.7 874.5 937.3 315 2.7 3 FALSE 5.44E-05 0.002358 0.582 -250 80285 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EKYEITEQR [K].ekYEITEQR.[K] N-Term(TMT6plex); K2(TMT6plex) 2 P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 Q3UFI4; P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=2 SV=1; 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 1 2 2 0.6646 0 1 1 1 827.46509 1653.9229 1653.92121 1.02 0.00085 0/0 0 0 10249413 HCD 30 MS2 0 297.4 110 60.5736 17514 17514 17512 QEplus033719.raw F4 291.3 279 341.9 256.6 312.7 302.6 391 3.28 1 FALSE 1.14E-05 2.30E-05 0.979 -250 80323 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVHPAVVIR [K].kVHPAVVIR.[Q] N-Term(TMT6plex); K1(TMT6plex) 1 P62830 60S ribosomal protein L23 OS=Mus musculus OX=10090 GN=Rpl23 PE=1 SV=1 P62830 60S ribosomal protein L23 OS=Mus musculus OX=10090 GN=Rpl23 PE=1 SV=1 1 3 3 0.6108 0 1 1 1 492.9975 1476.97794 1476.97787 0.04 0.00002 0/0 0 0 11995262 HCD 30 MS2 64.6622 789.7 110 60.5853 17519 17519 17512 QEplus033719.raw F4 829.4 648.4 1040.8 655 629.7 935 98 3.34 1 FALSE 1.14E-05 3.01E-06 1.146 -250 80333 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAHFEPSQR [K].lAHFEPSQR.[Q] N-Term(TMT6plex) 7 E9QNN1 DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1 O70133-2; Q3UR42; O70133-3; E9QNN1; A0A0R4J2C3; A0A087WPL5; O70133 Isoform 2 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; DEAH box protein 9 (Fragment) OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; Isoform 3 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=2 0 3 3 0.6607 0 1 1 1 438.57669 1313.71552 1313.71635 -0.63 -0.00028 0/0 0 0 6115247 HCD 30 MS2 62.21516 682.4 110 60.5878 17520 17520 17512 QEplus033719.raw F4 976.6 422.5 598.9 702 584.1 810.1 257 3.36 1 FALSE 5.44E-05 0.002187 0.59 -250 80343 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TFQGPNCPATCGR [K].tFQGPNcPATcGR.[V] N-Term(TMT6plex); C7(Carbamidomethyl); C11(Carbamidomethyl) 5 J3QN89 Angio-associated migratory protein OS=Mus musculus OX=10090 GN=Aamp PE=1 SV=1 J3QN89; Q8K2C1; Q3TJ22; Q3UJF9; Q3U9F0 Angio-associated migratory protein OS=Mus musculus OX=10090 GN=Aamp PE=1 SV=1; Aamp protein OS=Mus musculus OX=10090 GN=Aamp PE=2 SV=1; Angio-associated migratory protein OS=Mus musculus OX=10090 GN=Aamp PE=1 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Aamp PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Aamp PE=2 SV=1 0 2 2 0.8291 0 1 1 1 847.90173 1694.79619 1694.79403 1.28 0.00108 0/0 0 0 5166163.5 HCD 30 MS2 0 181 110 60.5929 17522 17522 17512 QEplus033719.raw F4 183.1 155.8 206.6 148.2 192.9 199.1 70 4.33 1 FALSE 1.14E-05 5.23E-10 1.86 -250 80349 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAVTYTEHAK [R].dAVTYTEHAk.[R] N-Term(TMT6plex); K10(TMT6plex) 2 P62806 Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2 Q61667; P62806 Histone H4 (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2 0 3 3 0.7328 0 1 1 1 531.62921 1592.87308 1592.86844 2.91 0.00155 0/0 0 0 2464180992 HCD 30 MS2 4.451877 480.1 0.743 60.6002 17524 17524 17523 QEplus033719.raw F4 394.6 573.6 486.4 325.7 770.2 330.1 403 4.64 1 FALSE 1.14E-05 2.06E-09 1.747 -250 80358 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEYDESGPSIVHR [K].qEYDESGPSIVHR.[K-] N-Term(TMT6plex) 20 Q3UAF6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q3UCF8; Q3TSB7; Q3UAF6; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; F8WGM8; Q99NC5; Q3TIJ9; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P63260; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 0 2 2 0.6696 0 1 1 1 873.43298 1745.85869 1745.86559 -3.95 -0.00345 0/0 0 0 5185559 HCD 30 MS2 0 298.7 110 60.6027 17525 17525 17523 QEplus033719.raw F4 307.8 291.4 275 256.8 461.2 200.3 141 4.51 1 FALSE 1.14E-05 1.51E-11 2.153 -250 80366 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVELAGAK [R].rVELAGAk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 Q80UG5 Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 Q80UG5-3; Q80UG5; A2A6U3 Isoform 3 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 1 3 3 0.4075 0 1 1 1 434.6152 1301.83106 1301.83054 0.4 0.00017 0/0 0 0 81546624 HCD 30 MS2 6.797884 533.9 14.647 60.605 17526 17526 17523 QEplus033719.raw F4 556.1 503.2 571.8 384 642.3 546.2 392 4 1 FALSE 1.14E-05 7.02E-05 0.886 -250 80371 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESQEFLR [K].eSQEFLR.[S] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.4226 0 1 1 1 569.30878 1137.61028 1137.61015 0.11 0.00006 0/0 0 0 42415764 HCD 30 MS2 58.94468 754.7 22.655 60.6072 17527 17527 17523 QEplus033719.raw F4 905.4 306.3 729.1 1048.8 458.1 1080.5 200 2.39 1 FALSE 0.0002518 0.005131 0.498 -250 80375 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CYEMASHLR [K].cYEMASHLR.[R] N-Term(TMT6plex); C1(Carbamidomethyl) 3 Q5SX50 Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=1 SV=1 Q3U7V7; Q5SX50; P02584 Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=2 SV=1; Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=1 SV=1; SWISS-PROT:P02584 (Bos taurus) Profilin-1 0 3 3 0.6438 0 1 1 1 465.89526 1395.67124 1395.67106 0.13 0.00006 0/0 0 0 25223518 HCD 30 MS2 46.45595 445.8 29.652 60.6095 17528 17528 17523 QEplus033719.raw F4 504.6 318.6 458.5 363.6 410.8 618.7 72 4.66 1 TRUE 1.14E-05 9.23E-07 1.244 -250 80383 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NALIHK [R].nALIHk.[S] N-Term(TMT6plex); K6(TMT6plex) 6 E9QNN1 DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1 O70133-2; O70133-3; Q3TF92; E9QNN1; A0A087WPL5; O70133 Isoform 2 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; Isoform 3 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; OB_NTP_bind domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dhx9 PE=2 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=2 0 2 2 0.3911 0 1 1 1 577.37531 1153.74333 1153.74575 -2.09 -0.00121 0/0 0 0 5233897.5 HCD 30 MS2 0 745.7 110 60.612 17529 17529 17523 QEplus033719.raw F4 757.6 627.6 823.5 603.3 927.4 734.7 68 2.48 1 FALSE 0.006609 0.1051 -0.007 -250 80392 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSATDLQTK [K].tSATDLQTk.[A] N-Term(TMT6plex); K9(TMT6plex) 5 Q3U449 Uncharacterized protein OS=Mus musculus OX=10090 GN=Bpnt1 PE=2 SV=1 D3Z5X0; Q9Z0S1; Q3UBN8; Q3U449; A0A1B0GRV0 "3'(2'),5'-bisphosphate nucleotidase 1 (Fragment) OS=Mus musculus OX=10090 GN=Bpnt1 PE=1 SV=1; 3'(2'),5'-bisphosphate nucleotidase 1 OS=Mus musculus OX=10090 GN=Bpnt1 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Bpnt1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Bpnt1 PE=2 SV=1; 3'(2'),5'-bisphosphate nucleotidase 1 OS=Mus musculus OX=10090 GN=Bpnt1 PE=1 SV=1" 0 2 2 0.5193 0 1 1 1 711.91455 1422.82182 1422.82043 0.98 0.0007 0/0 0 0 3392624.5 HCD 30 MS2 0 436 110 60.6145 17530 17530 17523 QEplus033719.raw F4 462.9 325.7 445.1 454.7 411.1 516.6 388 2.85 1 FALSE 1.14E-05 4.15E-06 1.12 -250 80400 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSTWSGESK [K].tSTWSGESk.[T] N-Term(TMT6plex); K9(TMT6plex) 6 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 3 3 0.487 0 1 1 1 480.92966 1440.77442 1440.77348 0.65 0.00031 0/0 0 0 21620692 HCD 30 MS2 21.83189 1174.6 99.198 60.6168 17531 17531 17523 QEplus033719.raw F4 1221.8 970.4 1245.9 1084 1175.3 1350.1 310 3.08 1 FALSE 5.44E-05 0.002038 0.597 -250 80405 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLIAQAR [K].dLIAQAR.[NT] N-Term(TMT6plex) 8 Q99MJ9; Q9JIK5 ATP-dependent RNA helicase DDX50 OS=Mus musculus OX=10090 GN=Ddx50 PE=2 SV=1;Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3 Q99MJ9; Q8K2L4; Q5BKP5; Q6PCP0; Q8BRU5; Q9JIK5; Q3ULC7; Q9CWZ5 ATP-dependent RNA helicase DDX50 OS=Mus musculus OX=10090 GN=Ddx50 PE=2 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx50 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx50 PE=2 SV=1; Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=2 0 2 2 0.2128 0 1 1 1 508.31097 1015.61467 1015.60976 4.84 0.00246 0/0 0 0 24173252 HCD 30 MS2 43.91644 750.7 31.427 60.6191 17532 17532 17523 QEplus033719.raw F4 723.1 646.4 756.7 619.5 969.4 788.8 326 2.35 2 FALSE 0.001177 0.01573 0.324 -250 80406 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLLAQAR [K].dLLAQAR.[NT] N-Term(TMT6plex) 5 Q61056; B2RPS7; A0A087WSD0; B7ZMP6; Q61056-2 Short transient receptor potential channel 1 OS=Mus musculus OX=10090 GN=Trpc1 PE=1 SV=5; Short transient receptor potential channel 1 OS=Mus musculus OX=10090 GN=Trpc1 PE=1 SV=1; Short transient receptor potential channel 1 (Fragment) OS=Mus musculus OX=10090 GN=Trpc1 PE=4 SV=1; Short transient receptor potential channel 1 OS=Mus musculus OX=10090 GN=Trpc1 PE=1 SV=1; Isoform Beta of Short transient receptor potential channel 1 OS=Mus musculus OX=10090 GN=Trpc1 0 2 2 0.2128 0 1 2 2 508.31097 1015.61467 1015.60976 4.84 0.00246 0/0 0 0 24173252 HCD 30 MS2 43.91644 750.7 31.427 60.6191 17532 17532 17523 QEplus033719.raw F4 723.1 646.4 756.7 619.5 969.4 788.8 326 2.35 2 FALSE 0.001177 0.01573 0.324 -250 80414 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVYPMER [K].tVYPMER.[L] N-Term(TMT6plex) 6 Q8BGB5; Q9ERG0 LIM domain-containing protein 2 OS=Mus musculus OX=10090 GN=Limd2 PE=1 SV=1;LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q8BGB5; Q8CD09; Q9ERG0; Q8C7S2; Q8C3R7; Q8BT15 LIM domain-containing protein 2 OS=Mus musculus OX=10090 GN=Limd2 PE=1 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 0 2 2 0.5259 0 1 1 1 562.80261 1124.59795 1124.59715 0.71 0.0004 0/0 0 0 10797735 HCD 30 MS2 47.47834 1183.7 110 60.6216 17533 17533 17523 QEplus033719.raw F4 1141.2 992.9 1420 991.8 1231 1325.2 157 2.51 2 FALSE 0.001257 0.01712 0.308 -250 80421 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEYDESGPSIVHR [K].qEYDESGPSIVHR.[K-] N-Term(TMT6plex) 20 Q3UAF6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q3UCF8; Q3TSB7; Q3UAF6; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; F8WGM8; Q99NC5; Q3TIJ9; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P63260; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 0 3 3 0.8215 0 1 1 1 582.62585 1745.86301 1745.86559 -1.48 -0.00086 0/0 0 0 42876252 HCD 30 MS2 9.116281 305.9 30.049 60.6289 17535 17535 17534 QEplus033719.raw F4 327.4 268.7 295 246.6 436.2 261.6 155 5.94 1 FALSE 1.14E-05 3.83E-10 1.886 -250 80428 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELETGPK [K].eLETGPk.[A] N-Term(TMT6plex); K7(TMT6plex) 3 Q60598 Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2 Q8BNA5; Q60598; Q921L6 SH3 domain-containing protein OS=Mus musculus OX=10090 GN=Cttn PE=2 SV=1; Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2; Cttn protein OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=1 0 2 2 0.3977 0 1 1 1 616.36829 1231.7293 1231.72982 -0.43 -0.00026 0/0 0 0 14974429 HCD 30 MS2 36.57456 1399.3 81.849 60.6312 17536 17536 17534 QEplus033719.raw F4 1338.1 1307.2 1428.9 1143.6 1820.9 1357.2 531 1.71 1 FALSE 0.001395 0.0198 0.283 -250 80435 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEIQIR [RK].aEIQIR.[RSI] N-Term(TMT6plex) 3 Q4FK74 ATP synthase F1 subunit delta OS=Mus musculus OX=10090 GN=Atp5d PE=1 SV=1 Q4FK74; Q9D0J2; Q9DCZ0 ATP synthase F1 subunit delta OS=Mus musculus OX=10090 GN=Atp5d PE=1 SV=1; ATP synthase F1 subunit delta OS=Mus musculus OX=10090 GN=Atp5d PE=2 SV=1; ATP synthase F1 subunit delta OS=Mus musculus OX=10090 GN=Atp5d PE=2 SV=1 0 2 2 0.177 0 1 1 1 479.79822 958.58916 958.5883 0.9 0.00043 0/0 0 0 81163800 HCD 30 MS2 17.03143 647.9 16.635 60.6334 17537 17537 17534 QEplus033719.raw F4 687 463 752.7 722.2 515.4 747.1 227 2.09 1 FALSE 0.002869 0.05628 0.124 -250 80436 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AELQLR [RK].aELQLR.[RSI] N-Term(TMT6plex) 7 Q8CJ19-4; A0A5F8MPF3; Q8BS74; A0A5F8MPU7; A0A1D5RM34; Q8CJ19; A0A5F8MPN4 Isoform 4 of [F-actin]-monooxygenase MICAL3 OS=Mus musculus OX=10090 GN=Mical3; F-actin monooxygenase OS=Mus musculus OX=10090 GN=Mical3 PE=1 SV=1; X-linked lymphocyte-regulated protein PM1 OS=Mus musculus OX=10090 GN=Xlr PE=1 SV=1; F-actin monooxygenase OS=Mus musculus OX=10090 GN=Mical3 PE=1 SV=1; [F-actin]-monooxygenase MICAL3 (Fragment) OS=Mus musculus OX=10090 GN=Mical3 PE=1 SV=1; [F-actin]-monooxygenase MICAL3 OS=Mus musculus OX=10090 GN=Mical3 PE=1 SV=2; F-actin monooxygenase OS=Mus musculus OX=10090 GN=Mical3 PE=1 SV=1 0 2 2 0.177 0 1 2 2 479.79822 958.58916 958.5883 0.9 0.00043 0/0 0 0 81163800 HCD 30 MS2 17.03143 647.9 16.635 60.6334 17537 17537 17534 QEplus033719.raw F4 687 463 752.7 722.2 515.4 747.1 227 2.09 1 FALSE 0.002869 0.05628 0.124 -250 80443 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FIDNPR [K].fIDNPR.[H] N-Term(TMT6plex) 2 Q3UGC8 Propanoyl-CoA:carbon dioxide ligase subunit alpha OS=Mus musculus OX=10090 GN=Pcca PE=1 SV=1 H3BL62; Q3UGC8 "Propionyl-CoA carboxylase alpha chain, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Pcca PE=1 SV=1; Propanoyl-CoA:carbon dioxide ligase subunit alpha OS=Mus musculus OX=10090 GN=Pcca PE=1 SV=1" 0 2 2 0.2973 0 1 1 1 495.78357 990.55986 990.557 2.89 0.00143 0/0 0 0 8198947 HCD 30 MS2 51.43153 1038.9 110 60.6359 17538 17538 17534 QEplus033719.raw F4 1208.1 782.9 1080.8 1010.8 1086 1064.6 249 1.48 1 FALSE 0.003295 0.06391 0.104 -250 80459 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLEAASEK [K].sLEAASEk.[Y] N-Term(TMT6plex); K8(TMT6plex) 2 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 A0A571BEU1; Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 0 2 2 0.0382 0 1 1 1 646.87256 1292.73784 1292.7462 -6.47 -0.00418 0/0 0 0 40685932 HCD 30 MS2 31.38915 1224.9 38.769 60.6407 17540 17540 17534 QEplus033719.raw F4 1292.2 1033.6 1193.6 992.1 1612 1226.1 435 2.88 1 FALSE 0.001318 0.01811 0.298 -250 80484 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEVGAPGAPGGKGDSGAPGER [K].gEVGAPGAPGGkGDSGAPGER.[G] N-Term(TMT6plex); K12(TMT6plex) 8 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; A0A087WPS3; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen alpha-1(III) chain (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 1 3 3 0.7419 0 1 1 1 761.07013 2281.19583 2281.19369 0.94 0.00071 0/0 0 0 7931237 HCD 30 MS2 13.76918 187.5 110 60.6481 17543 17543 17534 QEplus033719.raw F4 155.2 225.6 251.3 92.1 181.7 219.1 398 5.54 1 FALSE 1.14E-05 6.31E-16 3.292 -250 80492 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSAQGNVYVK [K].nSAQGNVYVk.[C] N-Term(TMT6plex); K10(TMT6plex) 5 Q3UXT6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1 Q3UXT6; Q8VH51; Q0VGU9; Q8VH51-2; Q3UZ51 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1; RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2; Rbm39 protein OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1; Isoform 2 of RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39; RBM39linker domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1 0 3 3 0.533 0 1 1 1 513.29816 1537.87992 1537.87386 3.94 0.00202 0/0 0 0 7134418.5 HCD 30 MS2 57.26841 864.2 110 60.6506 17544 17544 17534 QEplus033719.raw F4 952 702.3 885.9 729.6 1074 841.6 389 3.79 1 FALSE 1.14E-05 4.26E-06 1.118 -250 80517 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPAGPSGPVGK [R].gPAGPSGPVGk.[D] N-Term(TMT6plex); K11(TMT6plex) 5 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q91VL4; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Col1a2 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 3 3 0.7407 0 1 1 1 461.2785 1381.82096 1381.82037 0.42 0.0002 0/0 0 0 43724664 HCD 30 MS2 28.17455 778.8 30.03 60.6627 17548 17548 17545 QEplus033719.raw F4 795.7 585.7 869.2 704.8 858.2 859.4 253 3.78 1 FALSE 1.14E-05 2.09E-05 0.986 -250 80524 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLVVQQAGK [R].rLVVQQAGk.[A] N-Term(TMT6plex); K9(TMT6plex) 5 A0A1W2P6H1 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2 A0A1W2P6H1; H7BX05; A2AAJ9; E9QQ96; Z4YJE4 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Obscurin OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3 1 3 3 0.5615 0 1 1 1 486.31754 1456.93805 1456.9364 1.13 0.00055 0/0 0 0 28969452 HCD 30 MS2 32.98012 860.4 44.45 60.6649 17549 17549 17545 QEplus033719.raw F4 1104.6 340 787 1104.1 597.2 1229.6 246 3.74 1 FALSE 1.14E-05 1.56E-07 1.391 -250 80528 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FTVETR [KER].fTVETR.[GS] N-Term(TMT6plex) 7 B9EKP5; Q8VHX6 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1;Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; Q8VHX6-2; Q8VHX6; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.25 0 1 1 1 491.28152 981.55577 981.55666 -0.91 -0.00044 0/0 0 0 26299800 HCD 30 MS2 33.94071 1224 57.846 60.6672 17550 17550 17545 QEplus033719.raw F4 1526 891.5 1327.8 1147.3 1185.1 1266.1 70 2.24 2 FALSE 0.007584 0.124 -0.049 -250 80537 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LMVDGDR [K].lMVDGDR.[N] N-Term(TMT6plex) 5 A0A1C7CYV0 Plastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1 Q3UKB1; A0A1C7CYV0; B1AX58; Q3UJG9; Q99K51 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pls3 PE=2 SV=1; Plastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1; Plastin-3 OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pls3 PE=2 SV=1; Plastin-3 OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=3 0 2 2 0.339 0 1 1 1 517.77905 1034.55083 1034.5502 0.61 0.00032 0/0 0 0 7730350 HCD 30 MS2 36.64437 1134.2 110 60.6697 17551 17551 17545 QEplus033719.raw F4 1162.7 1042.7 1325 895.5 1205.4 1174.2 248 2.36 1 FALSE 9.73E-05 0.00293 0.561 -250 80547 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LREAAEGLR [R].lREAAEGLR.[VM] N-Term(TMT6plex) 9 A0A1L1SQ51; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1;Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q71LX4; Q68FD6; Q80TM2; A0A1L1SQ51; B2RY15; Q3UHS6; E9PUM4; P26039; Q3TN69 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=3; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1 1 2 2 0.365 0 1 1 1 622.37018 1243.73308 1243.732 0.87 0.00054 0/0 0 0 7525054 HCD 30 MS2 0 526.7 110 60.6722 17552 17552 17545 QEplus033719.raw F4 566.9 382.4 521.1 609.4 526 554.3 390 2.63 2 FALSE 0.002552 0.05033 0.141 -250 80556 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HENYDEALK [R].hENYDEALk.[L] N-Term(TMT6plex); K9(TMT6plex) 2 Q3UKP5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Xab2 PE=2 SV=1 Q3UKP5; Q9DCD2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Xab2 PE=2 SV=1; Pre-mRNA-splicing factor SYF1 OS=Mus musculus OX=10090 GN=Xab2 PE=1 SV=1 0 3 3 0.6213 0 1 1 1 526.28229 1576.83231 1576.83714 -3.07 -0.00161 0/0 0 0 5712338 HCD 30 MS2 0 532.4 110 60.6747 17553 17553 17545 QEplus033719.raw F4 568.9 480.7 582.2 440 560.4 562.1 298 3.01 1 FALSE 2.26E-05 0.001113 0.653 -250 80564 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SETDTSLIR [K].sETDTSLIR.[G] N-Term(TMT6plex) 6 Q52KG9 "Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1" Q52KG9; Q3TI62; Q8VEI1; Q3TW97; Q3TI05; Q3TIX8 "Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Cct6a protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1" 0 2 2 0.5776 0 1 1 1 625.84338 1250.67949 1250.67896 0.42 0.00026 0/0 0 0 5134203 HCD 30 MS2 0 484.2 110 60.6772 17554 17554 17545 QEplus033719.raw F4 490.9 382.3 513.9 373.8 564.5 579.6 306 3.03 1 FALSE 1.14E-05 2.07E-06 1.177 -250 80577 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAVTYTEHAK [R].dAVTYTEHAk.[R] N-Term(TMT6plex); K10(TMT6plex) 2 P62806 Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2 Q61667; P62806 Histone H4 (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2 0 2 2 0.6366 0 1 1 1 796.93817 1592.86907 1592.86844 0.39 0.00031 0/0 0 0 149919312 HCD 30 MS2 4.587343 696.1 13.923 60.687 17557 17557 17556 QEplus033719.raw F4 575.5 808.6 726.3 468.6 1103.4 494.2 399 4.87 1 FALSE 1.14E-05 6.52E-08 1.463 -250 80616 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHGFTFTR [R].aHGFTFTR.[G] N-Term(TMT6plex) 1 Q3UFJ3 Pyruvate dehydrogenase E1 component subunit alpha OS=Mus musculus OX=10090 GN=Pdha1 PE=1 SV=1 Q3UFJ3 Pyruvate dehydrogenase E1 component subunit alpha OS=Mus musculus OX=10090 GN=Pdha1 PE=1 SV=1 0 3 3 0.7263 0 1 1 1 389.21436 1165.62851 1165.63156 -2.61 -0.00101 0/0 0 0 7769455 HCD 30 MS2 31.25041 404.1 110 60.697 17561 17561 17556 QEplus033719.raw F4 390.6 292.6 434.8 418 427.7 461 162 3.69 1 FALSE 1.14E-05 7.42E-05 0.882 -250 80633 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLATSLR [K].gLATSLR.[N] N-Term(TMT6plex) 4 Q8R1X6 Spartin OS=Mus musculus OX=10090 GN=Spart PE=1 SV=1 Q8R1X6-2; D3Z2D6; D3Z3F8; Q8R1X6 "Isoform 2 of Spartin OS=Mus musculus OX=10090 GN=Spart; Spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) (Fragment) OS=Mus musculus OX=10090 GN=Spg20 PE=1 SV=1; Spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) OS=Mus musculus OX=10090 GN=Spg20 PE=1 SV=1; Spartin OS=Mus musculus OX=10090 GN=Spart PE=1 SV=1" 0 2 2 0.1214 0 1 1 1 473.79828 946.58928 946.5883 1.04 0.00049 0/0 0 0 13120461 HCD 30 MS2 72.04626 1183.8 73.663 60.7042 17564 17564 17556 QEplus033719.raw F4 1594.9 900.3 1271 889 1206.1 1241.3 61 1.4 1 FALSE 0.002148 0.04032 0.173 -250 80643 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIFHEEEPR [K].aIFHEEEPR.[H] N-Term(TMT6plex) 5 O54774 AP-3 complex subunit delta-1 OS=Mus musculus OX=10090 GN=Ap3d1 PE=1 SV=1 Q05CQ3; Q8CGH7; O54774; Q3UR54; Q3U237 AP-3 complex subunit delta (Fragment) OS=Mus musculus OX=10090 GN=Ap3d1 PE=2 SV=1; AP-3 complex subunit delta (Fragment) OS=Mus musculus OX=10090 GN=Ap3d1 PE=2 SV=1; AP-3 complex subunit delta-1 OS=Mus musculus OX=10090 GN=Ap3d1 PE=1 SV=1; AP-3 complex subunit delta (Fragment) OS=Mus musculus OX=10090 GN=Ap3d1 PE=2 SV=1; AP-3 complex subunit delta (Fragment) OS=Mus musculus OX=10090 GN=Ap3d1 PE=2 SV=1 0 3 3 0.7292 0 1 1 1 452.90836 1356.71051 1356.71093 -0.31 -0.00014 0/0 0 0 10348101 HCD 30 MS2 33.8064 661.8 110 60.7067 17565 17565 17556 QEplus033719.raw F4 793.6 513 673.1 549.3 745.4 696.6 184 3.73 1 FALSE 1.14E-05 2.37E-06 1.166 -250 80656 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVELAGAK [R].rVELAGAk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 Q80UG5 Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 Q80UG5-3; Q80UG5; A2A6U3 Isoform 3 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 1 2 2 0.4236 0 1 1 1 651.41986 1301.83245 1301.83054 1.46 0.00095 0/0 0 0 5309287.5 HCD 30 MS2 49.92249 632.7 110 60.719 17569 17569 17567 QEplus033719.raw F4 640.5 523.9 650.9 630.5 663 687.6 347 2.03 1 FALSE 0.001851 0.03145 0.209 -250 80665 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLEAASEK [K].sLEAASEk.[Y] N-Term(TMT6plex); K8(TMT6plex) 2 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 A0A571BEU1; Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 0 2 2 0.2962 0 1 1 1 646.8761 1292.74492 1292.7462 -0.99 -0.00064 0/0 0 0 56028612 HCD 30 MS2 25.18065 1208.9 31.599 60.7213 17570 17570 17567 QEplus033719.raw F4 1297.2 1133.4 1146 886.9 1772.2 1018 414 3.41 1 FALSE 1.14E-05 0.0004006 0.741 -250 80688 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CYEMASHLR [K].cYEMASHLR.[R] N-Term(TMT6plex); C1(Carbamidomethyl) 3 Q5SX50 Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=1 SV=1 Q3U7V7; Q5SX50; P02584 Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=2 SV=1; Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=1 SV=1; SWISS-PROT:P02584 (Bos taurus) Profilin-1 0 2 2 0.6466 0 1 1 1 698.33929 1395.67131 1395.67106 0.18 0.00013 0/0 0 0 13276928 HCD 30 MS2 0 639.8 110 60.7283 17573 17573 17567 QEplus033719.raw F4 655.3 617.6 690 564.5 701.2 610.4 73 3.48 1 TRUE 1.14E-05 0.0001232 0.84 -250 80701 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EESGKPGAHVTVK [R].eESGkPGAHVTVk.[K] N-Term(TMT6plex); K5(TMT6plex); K13(TMT6plex) 4 O88569 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2 O88569-3; B7ZP22; O88569; O88569-2 Isoform 3 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2; Isoform 2 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 0 3 3 0.5493 0 1 1 1 676.06909 2026.19272 2026.19 1.34 0.00091 0/0 0 0 4678240.5 HCD 30 MS2 0 642.5 110 60.7333 17575 17575 17567 QEplus033719.raw F4 734.2 644.4 603.8 609.8 956.2 306.3 345 4.06 1 FALSE 1.14E-05 2.62E-09 1.728 -250 80705 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EESGKPGAHVTVK [R].eESGkPGAHVTVk.[K] N-Term(TMT6plex); K5(TMT6plex); K13(TMT6plex) 4 O88569 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2 O88569-3; B7ZP22; O88569; O88569-2 Isoform 3 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2; Isoform 2 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 0 4 4 0.5805 0 1 1 1 507.30344 2026.19192 2026.19 0.94 0.00048 0/0 0 0 65996816 HCD 30 MS2 17.6561 857.6 26.503 60.7356 17576 17576 17567 QEplus033719.raw F4 1001.5 845.5 773.8 807 1319.3 398.3 365 3.79 1 FALSE 1.14E-05 1.83E-05 0.998 -250 80711 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IANPVEGSSGR [K].iANPVEGSSGR.[Q] N-Term(TMT6plex) 1 P60335 Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1 P60335 Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1 0 2 2 0.6049 0 1 1 1 658.3623 1315.71733 1315.71674 0.45 0.00029 0/0 0 0 32288790 HCD 30 MS2 41.8172 919.7 50.391 60.7379 17577 17577 17567 QEplus033719.raw F4 1018.1 723.6 986.9 685.7 1078.3 1025.5 293 3.29 1 FALSE 1.14E-05 4.21E-08 1.499 -250 80735 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVSDYDGK [K].sVSDYDGk.[L] N-Term(TMT6plex); K8(TMT6plex) 13 P09103 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2 P09103; Q3URP6; Q3TWE3; Q3U738; Q3TT76; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; Q3UA23; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 0 3 3 0.6486 0 1 1 1 443.57495 1328.7103 1328.70982 0.36 0.00016 0/0 0 0 60803260 HCD 30 MS2 7.211888 483.6 22.148 60.7519 17582 17582 17578 QEplus033719.raw F4 462.7 426.9 500.9 432.9 597.7 480.5 216 2.76 1 FALSE 0.000565 0.008692 0.427 -250 80740 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YLMGER [R].yLMGER.[L] N-Term(TMT6plex) 11 A0A1B0GSX0 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1 A0A1B0GQX5; Q3TI99; D3YZQ9; Q3THB4; Q3UIC3; Q3UDU4; Q99K20; A0A1B0GSR9; Q3TCI7; A0A1B0GSX0; P06151 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=2; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3 0 2 2 0.5488 0 1 1 1 499.27087 997.53447 997.53382 0.66 0.00033 0/0 0 0 30988962 HCD 30 MS2 42.43048 1097.6 30.004 60.7542 17583 17583 17578 QEplus033719.raw F4 1140.6 796.1 1138.6 1134.8 1201.8 1173.7 95 2.15 1 FALSE 0.00398 0.07391 0.077 -250 80745 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NKEDEDIAK [K].nkEDEDIAk.[A] N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex) 2 O88811 Signal transducing adapter molecule 2 OS=Mus musculus OX=10090 GN=Stam2 PE=1 SV=1 O88811-2; O88811 Isoform 2 of Signal transducing adapter molecule 2 OS=Mus musculus OX=10090 GN=Stam2; Signal transducing adapter molecule 2 OS=Mus musculus OX=10090 GN=Stam2 PE=1 SV=1 1 3 3 0.4441 0 1 1 1 583.67139 1748.99961 1748.99974 -0.08 -0.00004 0/0 0 0 9491439 HCD 30 MS2 38.10196 1018.1 110 60.7567 17584 17584 17578 QEplus033719.raw F4 1048.7 832.7 1036.4 957.8 1172.7 1060.2 512 3.22 1 FALSE 1.14E-05 6.61E-05 0.891 -250 80753 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTVQVEQSK [K].kTVQVEQSk.[V] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 7 E9Q1G8 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2 E9Q1G8; Q8C2A3; E9Q9F5; Q5DTS3; Q3UNN1; O55131; Q3UGE0 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin-7 (Fragment) OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin-7 OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=1; Septin-type G domain-containing protein OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1 1 3 3 0.5761 0 1 1 1 578.69537 1734.07157 1734.07285 -0.74 -0.00043 0/0 0 0 9361184 HCD 30 MS2 50.39484 953.1 110 60.7592 17585 17585 17578 QEplus033719.raw F4 1049.3 799.8 1019.1 844.4 1113.4 892.5 308 4.01 1 FALSE 1.14E-05 2.23E-06 1.171 -250 80773 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VKVDPSHDASK [R].vkVDPSHDASk.[V] N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex) 1 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 1 4 4 0.6731 0 1 1 1 468.28152 1870.10427 1870.10012 2.22 0.00104 0/0 0 0 16987746 HCD 30 MS2 31.43496 796.6 110 60.7667 17588 17588 17578 QEplus033719.raw F4 899.8 913.7 829.1 651.2 874.1 611.7 341 3.61 1 FALSE 1.14E-05 0.0001803 0.808 -250 80780 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DKEPKEEVK [K].dkEPkEEVk.[S] N-Term(TMT6plex); K2(TMT6plex); K5(TMT6plex); K9(TMT6plex) 14 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; F6RGN9; Q3UGC3; E9QA15; F6ZAW1; E9Q0M9; D3Z6I7; S4R1T7; E9Q9F3; Q8VD79; F6T2Z7; E9QA16; Q3TUS1; F6QLP8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; H-caldesmon (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 2 3 3 0.3897 0 1 1 1 673.41534 2018.23148 2018.23036 0.56 0.00037 0/0 0 0 14440270 HCD 30 MS2 6.82591 767.3 110 60.774 17590 17590 17589 QEplus033719.raw F4 813.1 607.4 732.1 642.4 1171.6 637.2 262 1.95 1 FALSE 0.0009633 0.01302 0.359 -250 80788 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSASPIQK [K].dSASPIQk.[K] N-Term(TMT6plex); K8(TMT6plex) 2 O08784 Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 O08784; H3BL37 Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 0 2 2 0.5709 0 1 1 1 652.38507 1303.76286 1303.76219 0.52 0.00034 0/0 0 0 5831659 HCD 30 MS2 58.34934 790.1 110 60.7765 17591 17591 17589 QEplus033719.raw F4 782.3 764.2 903.6 672.9 786.6 831.3 518 2.61 1 FALSE 0.0008445 0.01159 0.379 -250 80793 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGGADPSLQQGEGSKK [K].sGGADPSLQQGEGSkk.[G] N-Term(TMT6plex); K15(TMT6plex); K16(TMT6plex) 3 Q9D104 Signal recognition particle 19 kDa protein OS=Mus musculus OX=10090 GN=Srp19 PE=1 SV=1 Q8BZ07; Q9D104; G5E8T3 Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Signal recognition particle 19 kDa protein OS=Mus musculus OX=10090 GN=Srp19 PE=1 SV=1; Signal recognition particle 19 kDa protein OS=Mus musculus OX=10090 GN=Srp19 PE=1 SV=1 1 3 3 0.7778 0 1 1 1 745.08606 2233.24363 2233.23914 2.01 0.0015 0/0 0 0 6734604.5 HCD 30 MS2 0 463.6 110 60.7813 17593 17593 17589 QEplus033719.raw F4 473.2 445.2 528.9 374.6 488.2 471.3 480 4.68 1 FALSE 1.14E-05 6.31E-16 3.281 -250 80826 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSTSQDAACK [K].lSTSQDAAck.[D] N-Term(TMT6plex); C9(Carbamidomethyl); K10(TMT6plex) 4 G5E8R4 Serine/threonine-protein phosphatase 6 regulatory subunit 3 OS=Mus musculus OX=10090 GN=Ppp6r3 PE=1 SV=1 G5E8R4; A0A286YE88; Q922D4-2; Q922D4 Serine/threonine-protein phosphatase 6 regulatory subunit 3 OS=Mus musculus OX=10090 GN=Ppp6r3 PE=1 SV=1; Serine/threonine-protein phosphatase 6 regulatory subunit 3 (Fragment) OS=Mus musculus OX=10090 GN=Ppp6r3 PE=1 SV=1; Isoform 2 of Serine/threonine-protein phosphatase 6 regulatory subunit 3 OS=Mus musculus OX=10090 GN=Ppp6r3; Serine/threonine-protein phosphatase 6 regulatory subunit 3 OS=Mus musculus OX=10090 GN=Ppp6r3 PE=1 SV=1 0 2 2 0.6667 0 1 1 1 769.91339 1538.81951 1538.82486 -3.48 -0.00268 0/0 0 0 4751373 HCD 30 MS2 25.47436 447 110 60.7938 17598 17598 17589 QEplus033719.raw F4 406.4 430.5 500.1 323.4 589.4 431.9 301 3.57 1 FALSE 1.14E-05 2.05E-07 1.368 -250 80833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDVVPK [R].gDVVPk.[D] N-Term(TMT6plex); K6(TMT6plex) 11 P68369; Q52L87; A0A0A0MQA5 Tubulin alpha-1A chain OS=Mus musculus OX=10090 GN=Tuba1a PE=1 SV=1;Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=1 SV=1;Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1 Q5FW91; Q3TIZ0; Q9JJZ2; Q99KA2; Q3UX10; P68369; Q9D9Y2; P05213; Q52L87; A0A0A0MQA5; P68368 Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba3a PE=1 SV=1; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=2 SV=1; Tubulin alpha-8 chain OS=Mus musculus OX=10090 GN=Tuba8 PE=1 SV=1; Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba1b PE=2 SV=1; Tubulin alpha chain-like 3 OS=Mus musculus OX=10090 GN=Tubal3 PE=2 SV=2; Tubulin alpha-1A chain OS=Mus musculus OX=10090 GN=Tuba1a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Tubulin alpha-1B chain OS=Mus musculus OX=10090 GN=Tuba1b PE=1 SV=2; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=1 SV=1; Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1; Tubulin alpha-4A chain OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1 0 2 2 0.1326 0 1 1 1 536.8421 1072.67693 1072.67667 0.24 0.00013 0/0 0 0 992682752 HCD 30 MS2 5.227182 810.6 1.441 60.8036 17601 17601 17600 QEplus033719.raw F4 833.3 634.9 766.5 733.7 1115.3 779.7 149 1.81 3 FALSE 0.009673 0.1854 -0.122 -250 80842 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FRDGPPLR [R].fRDGPPLR.[G] N-Term(TMT6plex) 3 Q80U88 Eukaryotic translation initiation factor 4H (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0038 PE=4 SV=3 Q80U88; Q9WUK2-2; Q9WUK2 Eukaryotic translation initiation factor 4H (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0038 PE=4 SV=3; Isoform Short of Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h; Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h PE=1 SV=3 1 3 3 0.4295 0 1 1 1 396.23532 1186.69141 1186.68941 1.69 0.00067 0/0 0 0 7679664.5 HCD 30 MS2 52.35752 447 110 60.8061 17602 17602 17600 QEplus033719.raw F4 476.5 393.7 465.2 312.9 538 495.9 367 2.98 1 FALSE 1.14E-05 0.0002841 0.77 -250 80866 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLPTHDASK [K].vLPTHDASk.[V] N-Term(TMT6plex); K9(TMT6plex) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.4802 0 1 1 1 475.95486 1425.85004 1425.84659 2.42 0.00115 0/0 0 0 11421970 HCD 30 MS2 8.222 934.8 110 60.8156 17606 17606 17600 QEplus033719.raw F4 1011.8 855.5 922 764.5 1153.8 901.4 260 3.79 1 FALSE 0.0001603 0.003543 0.541 -250 80894 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALPDTSEDRDTK [K].aLPDTSEDRDTk.[E] N-Term(TMT6plex); K12(TMT6plex) 5 Q8BKL4 Striatin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Strn PE=2 SV=1 Q8BKL4; F8WH41; F6Z700; Q3UWX9; O55106 Striatin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Strn PE=2 SV=1; Striatin OS=Mus musculus OX=10090 GN=Strn PE=1 SV=1; Striatin (Fragment) OS=Mus musculus OX=10090 GN=Strn PE=1 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Strn PE=2 SV=1; Striatin OS=Mus musculus OX=10090 GN=Strn PE=1 SV=2 1 3 3 0.6499 0 1 1 1 602.66034 1805.96646 1805.96453 1.07 0.00065 0/0 0 0 7694492.5 HCD 30 MS2 17.17859 849.3 110 60.8257 17610 17610 17600 QEplus033719.raw F4 826.8 803.6 924.4 665.8 1072.7 802.6 383 4.37 1 FALSE 1.14E-05 2.22E-07 1.361 -250 80945 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEEAEK [K].lEEAEk.[AEH] N-Term(TMT6plex); K6(TMT6plex) 42 E9Q456; G5E8R2; G5E8R1; Q8BFU3; P58774; Q8C7C3; A2AIM4; Q58E70; P58774-2; E9Q5J9; A0A0R4J1P2; E9Q450 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;RING finger protein 214 OS=Mus musculus OX=10090 GN=Rnf214 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 E9Q456; Q9D1R6; E9Q455; G5E8R2; E9Q453; Q91VH3; Q8BFU3-5; G5E8R1; Q8BSH3; D3Z6I8; Q8BFU3; E9Q452; P58774; F8WID5; S4R2U0; Q8C7C3; A2AIM4; Q3TJ53; Q58E70; D3Z2H9; Q3SX28; Q8BFU3-3; Q8BFU3-2; Q8BFU3-4; P58774-2; E9Q454; Q61344; E9Q5J9; D3Z6F0; A0A0R4J1P2; E9Q448; P21107; E9Q450; Q8K0Z5; G5E8R0; Q564G1; B7ZNL3; Q8BP43; E9Q7Q3; A0A2R2Y2P8; P58771; E9PXF7 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Isoform 5 of RING finger protein 214 OS=Mus musculus OX=10090 GN=Rnf214; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; RING finger protein 214 OS=Mus musculus OX=10090 GN=Rnf214 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin 3, related sequence 7 OS=Mus musculus OX=10090 GN=Tpm3-rs7 PE=3 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 3 of RING finger protein 214 OS=Mus musculus OX=10090 GN=Rnf214; Isoform 2 of RING finger protein 214 OS=Mus musculus OX=10090 GN=Rnf214; Isoform 4 of RING finger protein 214 OS=Mus musculus OX=10090 GN=Rnf214; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Interferon-induced protein with tetratricpeptide repeats 1B-like 1 OS=Mus musculus OX=10090 GN=Ifit1bl1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=3; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 3, gamma OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Interferon-induced protein with tetratricpeptide repeats 1B-like 1 OS=Mus musculus OX=10090 GN=Ifit1bl1 PE=1 SV=1" 0 2 2 0.195 0 1 1 1 588.8479 1176.68852 1176.68762 0.76 0.00045 0/0 0 0 29877684 HCD 30 MS2 5.826835 1413.5 45.07 60.8498 17619 17619 17611 QEplus033719.raw F4 2197.2 890.1 1519.7 1415.7 1006 1452.3 398 2.41 12 TRUE 0.004373 0.07923 0.063 -250 80950 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLAVNQENER [K].vLAVNQENER.[L] N-Term(TMT6plex) 3 Q9JI91 Alpha-actinin-2 OS=Mus musculus OX=10090 GN=Actn2 PE=1 SV=2 Q5FW75; Q9JI91; Q8K3Q4 Actinin alpha 2 OS=Mus musculus OX=10090 GN=Actn2 PE=2 SV=1; Alpha-actinin-2 OS=Mus musculus OX=10090 GN=Actn2 PE=1 SV=2; Actinin alpha 2 OS=Mus musculus OX=10090 GN=Actn2 PE=2 SV=1 0 2 2 0.6317 0 1 1 1 700.88977 1400.77226 1400.76951 1.97 0.00138 0/0 0 0 11037685 HCD 30 MS2 37.64714 546.6 110 60.8523 17620 17620 17611 QEplus033719.raw F4 573.5 281.2 545.4 626.1 403.2 850.4 350 3.91 1 FALSE 1.14E-05 1.70E-08 1.574 -250 80959 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEEIDAK [K].aEEIDAk.[A] N-Term(TMT6plex); K7(TMT6plex) 4 P50518 V-type proton ATPase subunit E 1 OS=Mus musculus OX=10090 GN=Atp6v1e1 PE=1 SV=2 A0A0N4SWA3; A0A0N4SW07; P50518; Q9D593 V-type proton ATPase subunit E 1 (Fragment) OS=Mus musculus OX=10090 GN=Atp6v1e1 PE=1 SV=1; V-type proton ATPase subunit E 1 (Fragment) OS=Mus musculus OX=10090 GN=Atp6v1e1 PE=1 SV=1; V-type proton ATPase subunit E 1 OS=Mus musculus OX=10090 GN=Atp6v1e1 PE=1 SV=2; V-type proton ATPase subunit E 2 OS=Mus musculus OX=10090 GN=Atp6v1e2 PE=1 SV=1 0 2 2 0.2278 0 1 1 1 617.35919 1233.71111 1233.70909 1.64 0.00101 0/0 0 0 8681444 HCD 30 MS2 34.77492 1350.2 110 60.8548 17621 17621 17611 QEplus033719.raw F4 1479.7 979 1335.9 1504 1409.3 1393.4 469 1.8 1 FALSE 0.0009447 0.01283 0.361 -250 80974 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSTWSGESK [K].tSTWSGESk.[T] N-Term(TMT6plex); K9(TMT6plex) 6 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 2 2 0.5794 0 1 1 1 720.8905 1440.77373 1440.77348 0.17 0.00012 0/0 0 0 132822152 HCD 30 MS2 5.686536 820.9 17.308 60.8644 17624 17624 17622 QEplus033719.raw F4 809.5 825.3 866.5 548.9 1110.4 764.8 312 3.59 1 FALSE 5.44E-05 0.001849 0.606 -250 80979 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGAGVGSMTK [R].gGAGVGSMTk.[I] N-Term(TMT6plex); K10(TMT6plex) 6 Q5M9P3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1 D3YUT3; D3Z722; D3Z5R8; Q5M9P3; Q9CZX8; D3YUG3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=2; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=1; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=8; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=3; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=8 0 2 2 0.4227 0 1 1 1 661.87903 1322.75078 1322.75024 0.41 0.00027 0/0 0 0 53835968 HCD 30 MS2 45.23186 1254.9 25.234 60.8689 17626 17626 17622 QEplus033719.raw F4 1215.5 1085 1340.9 977.5 1589.8 1320.8 435 1.94 1 FALSE 1.14E-05 8.76E-07 1.248 -250 80987 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEGQAQAETK [K].lEGQAQAETk.[I] N-Term(TMT6plex); K10(TMT6plex) 2 Q9EQ61 Pescadillo homolog OS=Mus musculus OX=10090 GN=Pes1 PE=1 SV=1 Q9EQ61; Q5SQ20 Pescadillo homolog OS=Mus musculus OX=10090 GN=Pes1 PE=1 SV=1; Pescadillo homolog OS=Mus musculus OX=10090 GN=Pes1 PE=1 SV=1 0 2 2 0.5935 0 1 1 1 766.93842 1532.86955 1532.86844 0.73 0.00056 0/0 0 0 4624518.5 HCD 30 MS2 17.6657 337.9 110 60.8715 17627 17627 17622 QEplus033719.raw F4 337.9 281.7 392.4 267.3 367.4 380.5 495 4.28 1 FALSE 1.14E-05 8.25E-09 1.633 -250 81023 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNFEEDSR [K].vNFEEDSR.[G] N-Term(TMT6plex) 4 Q3UPL0 Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2 Q3UPL0; Q3UPL0-2; S4R2A9; S4R192 Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2; Isoform 2 of Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a; Protein transport protein Sec31A (Fragment) OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=1; Protein transport protein Sec31A (Fragment) OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=1 0 2 2 0.564 0 1 1 1 612.80713 1224.60698 1224.6058 0.97 0.00059 0/0 0 0 4939475.5 HCD 30 MS2 69.3164 817.4 110 60.8838 17632 17632 17622 QEplus033719.raw F4 794.4 866.3 995.3 667 754.1 827.3 119 2.11 1 FALSE 0.003658 0.0702 0.087 -250 81028 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAVTYTEHAK [R].dAVTYTEHAk.[R] N-Term(TMT6plex); K10(TMT6plex) 2 P62806 Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2 Q61667; P62806 Histone H4 (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2 0 4 4 0.5852 0 1 1 1 398.97253 1592.86831 1592.86844 -0.09 -0.00003 0/0 0 0 7947273 HCD 30 MS2 35.82861 327.8 110 60.8911 17634 17634 17633 QEplus033719.raw F4 306.7 293.2 363.8 283.6 414.9 304.5 397 3.64 1 FALSE 1.14E-05 3.28E-05 0.949 -250 81039 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLEAASEK [K].sLEAASEk.[Y] N-Term(TMT6plex); K8(TMT6plex) 2 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 A0A571BEU1; Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 0 3 3 0.3992 0 1 1 1 431.58728 1292.74729 1292.7462 0.84 0.00036 0/0 0 0 66430160 HCD 30 MS2 61.84204 808 17.899 60.8958 17636 17636 17633 QEplus033719.raw F4 1022.4 620.8 852.8 628.9 895.9 827.3 425 2.48 1 FALSE 0.0005751 0.008706 0.426 -250 81047 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEAASIK [R].eAEAASIk.[I] N-Term(TMT6plex); K8(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 2 2 0.4191 0 1 1 1 638.87976 1276.75224 1276.75129 0.75 0.00048 0/0 0 0 61043456 HCD 30 MS2 14.22771 1256.4 33.966 60.8981 17637 17637 17633 QEplus033719.raw F4 1356.8 980.9 1263.1 1056.8 1604.2 1276.4 447 3.03 1 FALSE 1.14E-05 0.000226 0.789 -250 81069 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYSTVTTK [K].sYSTVTTk.[C] N-Term(TMT6plex); K8(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.6818 0 1 1 1 672.89276 1344.77825 1344.7775 0.55 0.00037 0/0 0 0 21726026 HCD 30 MS2 15.49211 1135.9 110 60.9052 17640 17640 17633 QEplus033719.raw F4 1278.8 339.7 881.6 2180.4 482.5 1652.7 395 3.3 2 FALSE 1.14E-05 0.0001422 0.828 -250 81079 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LMTTGNNTVR [K].lMTTGNNTVR.[F] N-Term(TMT6plex) 1 Q3UE37 Ubiquitin-conjugating enzyme E2 Z OS=Mus musculus OX=10090 GN=Ube2z PE=1 SV=2 Q3UE37 Ubiquitin-conjugating enzyme E2 Z OS=Mus musculus OX=10090 GN=Ube2z PE=1 SV=2 0 2 2 0.2887 0 1 1 1 668.36755 1335.72783 1335.7252 1.97 0.00132 0/0 0 0 16788556 HCD 30 MS2 30.46204 1265.6 110 60.9077 17641 17641 17633 QEplus033719.raw F4 1270.5 1059.7 1274.3 1217.2 1331.8 1439.8 330 2.91 1 FALSE 1.14E-05 7.22E-05 0.884 -250 81093 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DFVEDDTTHG [K].dFVEDDTTHG.[-] N-Term(TMT6plex) 4 Q9CW03 Structural maintenance of chromosomes protein 3 OS=Mus musculus OX=10090 GN=Smc3 PE=1 SV=2 Q6PIE1; Q6PFZ4; Q9CW03; Q6P5E5 Structural maintenance of chromosomes protein 1A (Fragment) OS=Mus musculus OX=10090 GN=Smc3 PE=2 SV=1; Smc3 protein OS=Mus musculus OX=10090 GN=Smc3 PE=2 SV=1; Structural maintenance of chromosomes protein 3 OS=Mus musculus OX=10090 GN=Smc3 PE=1 SV=2; Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc3 PE=2 SV=1 0 2 2 0.8911 0 1 1 1 682.81219 1364.61711 1364.61676 0.26 0.00018 0/0 0 0 9511137 HCD 30 MS2 22.30461 626.8 110 60.9127 17643 17643 17633 QEplus033719.raw F4 627.2 572.3 676.3 519.8 714.5 650.7 21 3.49 1 FALSE 1.14E-05 2.37E-05 0.976 -250 81125 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGVVGPELHHK [K].eGVVGPELHHk.[L] N-Term(TMT6plex); K11(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 4 4 0.6459 0 1 1 1 415.74524 1659.95913 1659.95826 0.52 0.00022 0/0 0 0 25340724 HCD 30 MS2 39.0592 404.8 31.533 60.929 17649 17649 17644 QEplus033719.raw F4 371.3 347 484.8 338.2 400 487.2 461 3.53 2 FALSE 1.14E-05 2.03E-07 1.369 -250 81130 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEDEWDKPR [K].qEDEWDkPR.[I] N-Term(TMT6plex); K7(TMT6plex) 6 Q60715-2; Q3UF16 Isoform 2 of Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1;Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1 E9Q7B0; Q60715-2; Q3TN84; Q3UF16; Q3TTT2; Q60715 Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=1 SV=1; Isoform 2 of Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1; Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1 PE=1 SV=2 0 3 3 0.6957 0 1 1 1 554.29517 1660.87094 1660.86951 0.87 0.00048 0/0 0 0 23959590 HCD 30 MS2 50.01339 1205.4 57.162 60.9312 17650 17650 17644 QEplus033719.raw F4 1305.3 817.9 1244.8 1307.4 1230.4 1326.3 267 3.45 2 FALSE 1.14E-05 5.84E-07 1.282 -250 81135 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEQNIDCGGGYVK [K].hEQNIDcGGGYVk.[L] N-Term(TMT6plex); C7(Carbamidomethyl); K13(TMT6plex) 2 B2MWM9 Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 Q3UWP8; B2MWM9 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Calr PE=2 SV=1; Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 0 4 4 0.8505 0 1 1 1 484.50052 1934.98025 1934.97947 0.4 0.00019 0/0 0 0 16964376 HCD 30 MS2 24.48537 829.6 66.076 60.9335 17651 17651 17644 QEplus033719.raw F4 1141.1 629.7 876.2 651.8 830.6 848.4 226 5.35 1 FALSE 1.14E-05 1.48E-11 2.154 -250 81149 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DFESEK [R].dFESEk.[R] N-Term(TMT6plex); K6(TMT6plex) 15 A0A4Y5WWJ7 Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1 E9Q405; Q6PER1; Q9JMH9-6; A0A1C7ZN10; E9QAX2; Q9JMH9-5; Q9JMH9-4; Q9JMH9-1; B2RRE2; A0A4Y5WWJ7; Q9JMH9-2; K3W4L0; Q9JMH9-7; Q9JMH9; E9QA74 Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Myo18a protein (Fragment) OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1; Isoform 6 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 5 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Isoform 4 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Isoform 1 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Myo18a protein OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Myosin XVIIIA transcript variant 6 OS=Mus musculus OX=10090 GN=Myo18a PE=2 SV=1; Isoform 2 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1; Isoform 7 of Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=2; Unconventional myosin-XVIIIa OS=Mus musculus OX=10090 GN=Myo18a PE=1 SV=1 0 2 2 0.0706 0 1 1 1 606.82977 1212.65227 1212.65124 0.85 0.00051 0/0 0 0 9750232 HCD 30 MS2 45.36912 1584.4 110 60.9383 17653 17653 17644 QEplus033719.raw F4 1756.3 1013.6 1698 1622 1421.3 1995.3 171 1.7 1 FALSE 0.005221 0.08917 0.037 -250 81162 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EKYEITEQR [K].ekYEITEQR.[K] N-Term(TMT6plex); K2(TMT6plex) 2 P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 Q3UFI4; P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=2 SV=1; 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 1 3 3 0.6021 0 1 1 1 551.97919 1653.92301 1653.92121 1.09 0.0006 0/0 0 0 44830812 HCD 30 MS2 10.32517 786.5 28.408 60.9481 17656 17656 17655 QEplus033719.raw F4 764 685.5 884.8 749.1 789.8 845.8 391 2.84 1 FALSE 1.14E-05 2.64E-05 0.967 -250 81167 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEQNIDCGGGYVK [K].hEQNIDcGGGYVk.[L] N-Term(TMT6plex); C7(Carbamidomethyl); K13(TMT6plex) 2 B2MWM9 Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 Q3UWP8; B2MWM9 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Calr PE=2 SV=1; Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 0 2 2 0.7935 0 1 1 1 967.9953 1934.98332 1934.97947 1.99 0.00193 0/0 0 0 8728818 HCD 30 MS2 0 499.9 110 60.9506 17657 17657 17655 QEplus033719.raw F4 514.5 438.5 569.7 426.8 554.2 495.8 239 6.15 1 FALSE 1.14E-05 6.39E-13 2.414 -250 81188 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEAASIK [R].eAEAASIk.[I] N-Term(TMT6plex); K8(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 3 3 0.4925 0 1 1 1 426.25571 1276.75257 1276.75129 1 0.00043 0/0 0 0 35861328 HCD 30 MS2 26.80742 597.8 23.422 60.9574 17660 17660 17655 QEplus033719.raw F4 822.7 437.3 618.6 426.1 620.8 661.3 446 2.68 1 FALSE 5.44E-05 0.002206 0.589 -250 81193 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EASLGEASK [R].eASLGEASk.[L] N-Term(TMT6plex); K9(TMT6plex) 4 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q62261; A0A0A0MQG2; Q5DTR4; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; MKIAA4049 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 2 2 0.528 0 1 1 1 675.38794 1349.7686 1349.76767 0.69 0.00047 0/0 0 0 26041032 HCD 30 MS2 8.780679 1168.7 110 60.96 17661 17661 17655 QEplus033719.raw F4 1185.7 968.7 1351.3 1030.6 1096.4 1379.5 442 3.39 2 FALSE 1.14E-05 4.29E-06 1.117 -250 81202 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVTYEK [K].eVTYEk.[F] N-Term(TMT6plex); K6(TMT6plex) 3 F8WIV2 "Serine (or cysteine) peptidase inhibitor, clade B, member 6a OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1" F8WIV2; Q4FJQ6; Q3U3L3 "Serine (or cysteine) peptidase inhibitor, clade B, member 6a OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serpinb6a protein OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; SERPIN domain-containing protein OS=Mus musculus OX=10090 GN=Serpinb6a PE=2 SV=1" 0 2 2 0.3668 0 1 1 1 613.85455 1226.70183 1226.70328 -1.18 -0.00072 0/0 0 0 19866044 HCD 30 MS2 30.88696 1831.9 92.958 60.9645 17663 17663 17655 QEplus033719.raw F4 2009.4 1634.8 1722.8 1699.5 2201.2 1723.8 237 2.59 1 FALSE 0.00459 0.08139 0.058 -250 81228 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SARPFTPGLQGQR [R].sARPFTPGLQGQR.[S] N-Term(TMT6plex) 3 Q8BWB1; D3YU08 Synaptopodin 2-like protein OS=Mus musculus OX=10090 GN=Synpo2l PE=1 SV=1;Synaptopodin 2-like protein OS=Mus musculus OX=10090 GN=Synpo2l PE=1 SV=1 Q8BWB1; D3YU08; B2RQK7 Synaptopodin 2-like protein OS=Mus musculus OX=10090 GN=Synpo2l PE=1 SV=1; Synaptopodin 2-like protein OS=Mus musculus OX=10090 GN=Synpo2l PE=1 SV=1; Synaptopodin 2-like protein OS=Mus musculus OX=10090 GN=Synpo2l PE=1 SV=1 0 3 3 0.5722 0 1 1 1 548.64392 1643.91721 1643.9179 -0.42 -0.00023 0/0 0 0 16661636 HCD 30 MS2 23.72996 967.7 110 60.9764 17667 17667 17666 QEplus033719.raw F4 1021.1 557.7 1038.9 962.7 827.9 1397.7 371 3.95 2 FALSE 1.14E-05 8.66E-08 1.439 -250 81234 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLPTHDASK [K].vLPTHDASk.[V] N-Term(TMT6plex); K9(TMT6plex) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.4603 0 1 1 1 713.42841 1425.84953 1425.84659 2.07 0.00147 0/0 0 0 14808148 HCD 30 MS2 40.01429 757.2 110 60.9789 17668 17668 17666 QEplus033719.raw F4 740.7 677.5 757.7 672 925.2 770 266 3.15 1 FALSE 1.14E-05 2.32E-06 1.168 -250 81254 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGVTVAK [K].dGVTVAk.[S] N-Term(TMT6plex); K7(TMT6plex) 3 P63038 "60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" D3Z2F2; D3Z7J9; P63038 "60 kDa heat shock protein, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1; 60 kDa heat shock protein, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1; 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" 0 2 2 0.3623 0 1 1 1 574.35889 1147.7105 1147.70869 1.57 0.0009 0/0 0 0 102510360 HCD 30 MS2 14.14873 1051.4 10.957 60.9834 17670 17670 17666 QEplus033719.raw F4 1115.6 980.2 1115.5 901.1 1217.3 978.7 425 2.76 1 FALSE 0.0007436 0.01053 0.396 -250 81279 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STAGDTHLGGEDFDNR [K].sTAGDTHLGGEDFDNR.[M] N-Term(TMT6plex) 18 Q3TEK2; B7U582 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1;Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; Q3TH56; B7U582; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q9QZ38; Q3TB63; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16; P17156 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate hsc73 (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Mus musculus OX=10090 GN=Hspa2 PE=1 SV=2 0 3 3 0.8555 0 1 1 1 640.96832 1920.89042 1920.88851 0.99 0.00063 0/0 0 0 28613082 HCD 30 MS2 27.33304 969.8 110 60.9905 17673 17673 17666 QEplus033719.raw F4 969.7 818 1025.1 794.3 1170.1 1041.6 49 4.43 2 FALSE 1.14E-05 2.84E-13 2.481 -250 81283 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVAYTEK [K].tVAYTEk.[K] N-Term(TMT6plex); K7(TMT6plex) 1 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 0 2 2 0.3664 0 1 1 1 635.37683 1269.74639 1269.74547 0.72 0.00046 0/0 0 0 20421878 HCD 30 MS2 25.55803 1716.4 110 60.993 17674 17674 17666 QEplus033719.raw F4 1862 1530.6 1737 1418.3 2070 1680.5 256 2.92 1 FALSE 0.0004989 0.007806 0.443 -250 81300 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RKQEELQHLEQQR [R].rkQEELQHLEQQR.[Q] N-Term(TMT6plex); K2(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 2 4 4 0.7009 0 1 1 1 545.81299 2180.23012 2180.23002 0.05 0.00003 0/0 0 0 12232518 HCD 30 MS2 22.23734 986.7 110 60.9977 17676 17676 17666 QEplus033719.raw F4 1095.8 827.3 1110.2 834.6 998.9 1053.6 440 4.58 2 FALSE 1.14E-05 6.75E-05 0.89 -250 81325 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEQNIDCGGGYVK [K].hEQNIDcGGGYVk.[L] N-Term(TMT6plex); C7(Carbamidomethyl); K13(TMT6plex) 2 B2MWM9 Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 Q3UWP8; B2MWM9 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Calr PE=2 SV=1; Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 0 3 3 0.877 0 1 1 1 645.66534 1934.98148 1934.97947 1.04 0.00067 0/0 0 0 210891024 HCD 30 MS2 5.230393 366 7.022 61.0095 17680 17680 17677 QEplus033719.raw F4 365.4 325 425 322.3 395.4 363 232 6.75 1 FALSE 1.14E-05 1.89E-14 2.704 -250 81331 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDLASIR [R].gDLASIR.[W] N-Term(TMT6plex) 4 Q3UHT6 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1 Q3UHT6; P19096; Q3TB22; A0A0U1RNJ1 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2; Fatty acid synthase (Fragment) OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=1 0 2 2 0.22 0 1 1 1 480.7876 960.56792 960.56756 0.37 0.00018 0/0 0 0 45806764 HCD 30 MS2 27.25364 696.3 21.303 61.0118 17681 17681 17677 QEplus033719.raw F4 702.4 562.6 790.5 549.7 785.3 787 208 2.5 1 FALSE 0.0003803 0.006971 0.459 -250 81350 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSSDCEDQIR [R].lSSDcEDQIR.[I] N-Term(TMT6plex); C5(Carbamidomethyl) 3 F8WHM5 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 F8WHM5; Q61543; F6RSH1 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 0 2 2 0.7378 0 1 1 1 726.35413 1451.70098 1451.69977 0.83 0.0006 0/0 0 0 12882266 HCD 30 MS2 6.154834 522 110 61.0166 17683 17683 17677 QEplus033719.raw F4 503.5 513.3 573.7 438.1 579.7 523.7 81 3.47 1 FALSE 1.14E-05 1.48E-06 1.205 -250 81357 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSSNSYAIK [K].gSSNSYAIk.[K] N-Term(TMT6plex); K9(TMT6plex) 2 Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 P97461; Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=3; 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 0 2 2 0.4727 0 1 1 1 692.89612 1384.78496 1384.78365 0.95 0.00065 0/0 0 0 12698415 HCD 30 MS2 31.64751 1007.2 110 61.0191 17684 17684 17677 QEplus033719.raw F4 1037.9 863 1134.1 870.8 1077 1060.5 298 3.3 1 FALSE 1.14E-05 8.73E-06 1.059 -250 81383 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGVMVAK [RK].eGVmVAk.[K] N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex) 10 P63325; A0A3B2W864; Q9QXS1 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3" Q499F9; A0A338P731; P63325; A0A0R4J218; Q9QXS1-2; Q3UW83; A0A338P7K4; Q3U9P0; A0A3B2W864; Q9QXS1 "Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; 40S ribosomal protein S10 (Fragment) OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; S10_plectin domain-containing protein OS=Mus musculus OX=10090 GN=Rps10 PE=2 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3" 0 2 2 0.4536 0 1 1 1 604.35944 1207.7116 1207.71207 -0.39 -0.00024 0/0 0 0 9627302 HCD 30 MS2 0 812.8 110 61.0266 17687 17687 17677 QEplus033719.raw F4 836.6 604.6 891.6 683.1 927.7 933.2 447 1.94 3 FALSE 0.002123 0.03941 0.177 -250 81409 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FTGSEIR [KR].fTGSEIR.[VH] N-Term(TMT6plex) 5 Q9CXT8; Q9CZ13 "Mitochondrial-processing peptidase subunit beta OS=Mus musculus OX=10090 GN=Pmpcb PE=1 SV=1;Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrc1 PE=1 SV=2" Q9CXT8; Q3THM1; Q3TET5; Q9CZ13; Q3TIC8 "Mitochondrial-processing peptidase subunit beta OS=Mus musculus OX=10090 GN=Pmpcb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Uqcrc1 PE=2 SV=1; Beta-MPP (Fragment) OS=Mus musculus OX=10090 GN=Pmpcb PE=2 SV=1; Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrc1 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Uqcrc1 PE=2 SV=1" 0 2 2 0.4096 0 1 1 1 519.79321 1038.57915 1038.57813 0.99 0.00051 0/0 0 0 19415952 HCD 30 MS2 15.99398 1347.2 99.978 61.041 17692 17692 17688 QEplus033719.raw F4 1400.1 1065.1 1487.4 1458.8 1151.7 1520 96 2.49 2 FALSE 0.002318 0.04604 0.154 -250 81416 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGLSPANDTGAK [R].sGLSPANDTGAk.[K] N-Term(TMT6plex); K12(TMT6plex) 1 O70310 Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 O70310 Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 0 2 2 0.684 0 1 1 1 788.44135 1575.87541 1575.87426 0.73 0.00058 0/0 0 0 9976676 HCD 30 MS2 0 656.5 110 61.0435 17693 17693 17688 QEplus033719.raw F4 676.4 610.3 752.4 528.2 660.2 711.2 402 4.43 1 FALSE 1.14E-05 6.33E-12 2.225 -250 81431 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EASELEK [K].eASELEk.[L] N-Term(TMT6plex); K7(TMT6plex) 3 A0A0J9YV10 Zinc finger protein 512 (Fragment) OS=Mus musculus OX=10090 GN=Zfp512 PE=1 SV=1 A0A0J9YV10; Q69Z99; A0A0J9YTW0 Zinc finger protein 512 (Fragment) OS=Mus musculus OX=10090 GN=Zfp512 PE=1 SV=1; Zinc finger protein 512 OS=Mus musculus OX=10090 GN=Znf512 PE=2 SV=2; Zinc finger protein 512 (Fragment) OS=Mus musculus OX=10090 GN=Zfp512 PE=1 SV=3 0 2 2 0.0859 0 1 1 1 632.36469 1263.72209 1263.71965 1.93 0.00122 0/0 0 0 6497614 HCD 30 MS2 46.43236 1098.2 110 61.0486 17695 17695 17688 QEplus033719.raw F4 1064.7 967 1155.2 890.3 1441.1 1070.7 351 1.98 1 FALSE 0.0006966 0.0101 0.403 -250 81450 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGLSPANDTGAK [R].sGLSPANDTGAk.[K] N-Term(TMT6plex); K12(TMT6plex) 1 O70310 Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 O70310 Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 0 3 3 0.6857 0 1 1 1 525.96344 1575.87577 1575.87426 0.96 0.0005 0/0 0 0 13046683 HCD 30 MS2 23.97935 1083.7 110 61.0558 17698 17698 17688 QEplus033719.raw F4 1422.8 808.6 1114.2 950.6 1098.6 1107.6 401 3.85 1 FALSE 1.14E-05 0.0004808 0.726 -250 81472 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAVEAK [R].vAVEAk.[N] N-Term(TMT6plex); K6(TMT6plex) 17 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q3TSK4; Q8C153; P58252; O89070; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3TPG2; Q3UZ14; Q3TK17; Q3TLB1; Q3TWX1; Q3TX47 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Elongation factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 0 2 2 0.1456 0 1 1 1 537.85004 1074.6928 1074.69232 0.45 0.00024 0/0 0 0 160408208 HCD 30 MS2 26.66582 834.7 6.761 61.0679 17702 17702 17699 QEplus033719.raw F4 864.4 557.2 925.3 817.3 996.8 847.1 151 2.61 1 FALSE 0.004683 0.08241 0.055 -250 81482 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECTIEATA [R].ecTIEATA.[-] N-Term(TMT6plex); C2(Carbamidomethyl) 5 Q3ULK8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=1 Q3ULK8; P53996-2; Q3U5V2; A0A0N4SVS6; P53996 Uncharacterized protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=1; Isoform 2 of Cellular nucleic acid-binding protein OS=Mus musculus OX=10090 GN=Cnbp; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cnbp PE=2 SV=1; Cellular nucleic acid-binding protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=1; Cellular nucleic acid-binding protein OS=Mus musculus OX=10090 GN=Cnbp PE=1 SV=2 0 2 2 0.5085 0 1 1 1 562.27979 1123.55229 1123.55026 1.81 0.00102 0/0 0 0 35256412 HCD 30 MS2 44.43917 465.6 29.85 61.0702 17703 17703 17699 QEplus033719.raw F4 463.5 412.3 557 346.4 520.9 493.6 104 2.34 1 FALSE 0.006282 0.102 0.001 -250 81497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGIVALRR [K].eGIVALRR.[A] N-Term(TMT6plex) 5 Q52KG9 "Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1" Q52KG9; Q8VEI1; Q3TW97; Q3TI05; Q3TIX8 "Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Cct6a protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1" 1 3 3 0.1804 0 1 1 1 381.5787 1142.72156 1142.72071 0.75 0.00028 0/0 0 0 24299292 HCD 30 MS2 18.11039 610 56.764 61.0747 17705 17705 17699 QEplus033719.raw F4 624.8 496.5 675.8 471.2 674.6 717.3 208 3.16 1 FALSE 1.14E-05 2.24E-05 0.981 -250 81505 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRGEINK [K].lRGEINk.[V] N-Term(TMT6plex); K7(TMT6plex) 2 Q3U1C2 RuvB-like helicase OS=Mus musculus OX=10090 GN=Ruvbl1 PE=1 SV=1 Q3U1C2; Q3UJN2 RuvB-like helicase OS=Mus musculus OX=10090 GN=Ruvbl1 PE=1 SV=1; RuvB-like helicase OS=Mus musculus OX=10090 GN=Ruvbl1 PE=2 SV=1 1 3 3 0.25 0 1 1 1 429.94351 1287.81598 1287.81489 0.85 0.00036 0/0 0 0 17750282 HCD 30 MS2 26.00906 784.7 40.865 61.0769 17706 17706 17699 QEplus033719.raw F4 1015.6 604.1 807.5 614.7 820.4 845.9 557 2.84 1 FALSE 0.001972 0.03413 0.197 -250 81519 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLVDREK [K].vLVDREk.[V] N-Term(TMT6plex); K7(TMT6plex) 1 Q6PB66 "Leucine-rich PPR motif-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Lrpprc PE=1 SV=2" Q6PB66 "Leucine-rich PPR motif-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Lrpprc PE=1 SV=2" 1 3 3 0.2775 0 1 1 1 439.61539 1316.83161 1316.83021 1.06 0.00047 0/0 0 0 14221188 HCD 30 MS2 45.62233 647.5 48.897 61.0815 17708 17708 17699 QEplus033719.raw F4 643.2 501.6 771.1 583.6 617.4 768.2 432 2.09 1 FALSE 0.006849 0.1086 -0.016 -250 81536 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDEHLAK [K].vDEHLAk.[K] N-Term(TMT6plex); K7(TMT6plex) 5 O35639 Annexin A3 OS=Mus musculus OX=10090 GN=Anxa3 PE=1 SV=4 O35639; Q8C1X9; Q3TLP4; Q3TFK4; Q3U737 Annexin A3 OS=Mus musculus OX=10090 GN=Anxa3 PE=1 SV=4; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1 0 3 3 0.1818 0 1 1 1 423.92258 1269.75318 1269.75671 -2.78 -0.00118 0/0 0 0 28123834 HCD 30 MS2 40.29736 575.9 31.887 61.0913 17711 17711 17710 QEplus033719.raw F4 627.9 509.3 569.7 410.7 767.9 569.9 257 2.86 1 FALSE 0.004424 0.07949 0.063 -250 81544 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQAEEADEQANAHLTK [K].rQAEEADEQANAHLTk.[F] N-Term(TMT6plex); K16(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 4 4 0.7887 0 1 1 1 568.05469 2269.19692 2269.19369 1.42 0.00081 0/0 0 0 22256304 HCD 30 MS2 7.570607 946.5 110 61.0938 17712 17712 17710 QEplus033719.raw F4 1290.1 393.8 827.2 1543.6 513.9 1110.7 388 6.39 1 FALSE 1.14E-05 1.54E-13 2.531 -250 81552 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MYDAAK [K].mYDAAk.[L] N-Term(TMT6plex); K6(TMT6plex) 5 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 Q80U89; Q68FD5; Q5SXR6; Q3UPJ3; Q8K2I5 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1; Cltc protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1 0 2 2 0.1147 0 1 1 1 578.82648 1156.64568 1156.64365 1.75 0.00101 0/0 0 0 27166376 HCD 30 MS2 21.12587 1579.9 68.21 61.0961 17713 17713 17710 QEplus033719.raw F4 1640.8 1432.8 1697.6 1403.4 1780.2 1524.7 189 2.18 1 FALSE 0.005246 0.08941 0.036 -250 81558 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSSNSYAIK [K].gSSNSYAIk.[K] N-Term(TMT6plex); K9(TMT6plex) 2 Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 P97461; Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=3; 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 0 3 3 0.5016 0 1 1 1 462.26706 1384.78662 1384.78365 2.15 0.00099 0/0 0 0 15287298 HCD 30 MS2 35.76817 772.9 54.866 61.0983 17714 17714 17710 QEplus033719.raw F4 837.2 600.2 831 586.3 931.8 850.7 334 3.21 1 FALSE 1.14E-05 0.00033 0.757 -250 81572 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYPSSISSSPQK [R].rYPSSISSSPQk.[D] N-Term(TMT6plex); K12(TMT6plex) 13 Q80X50 Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1 A0A0G2JDV6; Q80X50-4; Q80X50-3; Q80U73; Q80X50-5; A0A0G2JFN7; A0A0H2UH17; Q8BJ53; Q80X50-2; Q80X50; Q812D5; Q812D4; Q3TSB0 Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Isoform 4 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Isoform 3 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; MKIAA0144 protein (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1; Isoform 5 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Ubiquitin-associated protein 2-like (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; UBA domain-containing protein OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1; Isoform 2 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Lingerer protein-2a OS=Mus musculus OX=10090 GN=lig-2a PE=2 SV=1; Lingerer protein-2b OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1 1 3 3 0.6922 0 1 1 1 599.00909 1795.01273 1795.01142 0.73 0.00044 0/0 0 0 4006468.75 HCD 30 MS2 0 489.8 110 61.1033 17716 17716 17710 QEplus033719.raw F4 506.3 401.9 503.1 423.9 584.7 518.9 421 5.75 1 FALSE 1.14E-05 1.59E-12 2.338 -250 81580 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQAEEADEQANAHLTK [K].rQAEEADEQANAHLTk.[F] N-Term(TMT6plex); K16(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 3 3 0.8175 0 1 1 1 757.0697 2269.19455 2269.19369 0.38 0.00029 0/0 0 0 9649288 HCD 30 MS2 0 155.5 110 61.1058 17717 17717 17710 QEplus033719.raw F4 210.4 59.5 132.9 262.6 83.3 184.4 388 6.63 1 FALSE 1.14E-05 6.31E-16 3.784 -250 81586 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKAEGSEIR [K].lkAEGSEIR.[L] N-Term(TMT6plex); K2(TMT6plex) 13 P09103 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2 P09103; Q3URP6; Q3TWE3; Q3U738; Q3TT76; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; Q3UA23; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 1 2 2 0.4932 0 1 1 1 730.94617 1460.88506 1460.8837 0.93 0.00068 0/0 0 0 9519385 HCD 30 MS2 0 381.4 110 61.1084 17718 17718 17710 QEplus033719.raw F4 336.2 454.5 426.1 317.2 394.7 359.6 418 2.21 1 FALSE 1.14E-05 0.0005433 0.715 -250 81590 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STAGDTHLGGEDFDNR [K].sTAGDTHLGGEDFDNR.[M] N-Term(TMT6plex) 18 Q3TEK2; B7U582 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1;Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; Q3TH56; B7U582; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q9QZ38; Q3TB63; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16; P17156 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate hsc73 (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Mus musculus OX=10090 GN=Hspa2 PE=1 SV=2 0 2 2 0.8843 0 1 1 1 960.94843 1920.88957 1920.88851 0.55 0.00053 0/0 0 0 9358875 HCD 30 MS2 0 86.8 110 61.1109 17719 17719 17710 QEplus033719.raw F4 90.6 66.4 83.7 83.1 116.1 80.7 47 5.53 2 FALSE 1.14E-05 6.31E-16 3.438 -250 81605 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAVTYTEHAK [R].dAVTYTEHAk.[R] N-Term(TMT6plex); K10(TMT6plex) 2 P62806 Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2 Q61667; P62806 Histone H4 (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2 0 3 3 0.3929 0 1 1 1 531.62823 1592.87015 1592.86844 1.07 0.00057 0/0 0 0 71941824 HCD 30 MS2 2.805525 761.7 29.108 61.1206 17722 17722 17721 QEplus033719.raw F4 706.6 765 761.5 694 1067.8 575.3 387 4.53 1 FALSE 1.14E-05 2.58E-09 1.729 -250 81621 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQQQVFK [R].gQQQVFk.[G] N-Term(TMT6plex); K7(TMT6plex) 2 Q8BMS1 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1" Q8BMS1; Q3TB39 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1; 3HCDH_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hadha PE=2 SV=1" 0 2 2 0.4229 0 1 1 1 646.89343 1292.77959 1292.77269 5.33 0.00345 0/0 0 0 53049164 HCD 30 MS2 64.33669 1683.9 31.414 61.1254 17724 17724 17721 QEplus033719.raw F4 1658.6 1306.8 1732.4 1655.5 1855.9 1894.3 251 1.75 1 FALSE 0.001248 0.01692 0.311 -250 81633 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WDSHFR [K].wDSHFR.[E] N-Term(TMT6plex) 15 Q8CAQ8; A0A0U1RP81 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1;MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q8CAQ8-4; Q3U7N2; E9PVS5; Q8CAQ8; E9QAY6; Q8CAQ8-2; Q3TZK4; A0A0U1RP81; Q3TVZ5; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5; A0A1B0GX08 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; Isoform 4 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 0 3 3 0.4615 0 1 1 1 359.5209 1076.54816 1076.54749 0.62 0.00022 0/0 0 0 16607516 HCD 30 MS2 34.6265 801.6 85.42 61.1299 17726 17726 17721 QEplus033719.raw F4 716.7 718.1 913.7 752.6 789.5 918.8 153 2.73 2 FALSE 0.00171 0.02865 0.223 -250 81640 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CNSLPAK [R].cNSLPAk.[F] N-Term(TMT6plex); C1(Carbamidomethyl); K7(TMT6plex) 5 Q9QZ88 Vacuolar protein sorting-associated protein 29 OS=Mus musculus OX=10090 GN=Vps29 PE=1 SV=1 Q9QZ88; D3YW98; Q9QZ88-2; D3YYD5; D3Z645 Vacuolar protein sorting-associated protein 29 OS=Mus musculus OX=10090 GN=Vps29 PE=1 SV=1; Vacuolar protein sorting-associated protein 29 OS=Mus musculus OX=10090 GN=Vps29 PE=1 SV=1; Isoform 2 of Vacuolar protein sorting-associated protein 29 OS=Mus musculus OX=10090 GN=Vps29; Vacuolar protein sorting-associated protein 29 (Fragment) OS=Mus musculus OX=10090 GN=Vps29 PE=1 SV=1; Vacuolar protein sorting-associated protein 29 OS=Mus musculus OX=10090 GN=Vps29 PE=1 SV=1 0 2 2 0.6038 0 1 1 1 624.3634 1247.71953 1247.71821 1.05 0.00066 0/0 0 0 8254721.5 HCD 30 MS2 32.43041 1105.9 110 61.1324 17727 17727 17721 QEplus033719.raw F4 1145.3 973.8 1205.9 911.5 1205.9 1192.8 402 2.12 1 FALSE 0.0003496 0.006847 0.461 -250 81669 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGVTVAK [K].dGVTVAk.[S] N-Term(TMT6plex); K7(TMT6plex) 3 P63038 "60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" D3Z2F2; D3Z7J9; P63038 "60 kDa heat shock protein, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1; 60 kDa heat shock protein, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1; 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" 0 3 3 0.3538 0 1 1 1 383.24121 1147.70908 1147.70869 0.34 0.00013 0/0 0 0 17053592 HCD 30 MS2 18.17913 634.2 77.875 61.1419 17731 17731 17721 QEplus033719.raw F4 661.1 570.2 688.4 497.6 733.6 654.6 425 2.77 1 FALSE 0.001343 0.01883 0.292 -250 81685 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHIAALK [K].gHIAALk.[K] N-Term(TMT6plex); K7(TMT6plex) 1 Q8R059 UDP-glucose 4-epimerase OS=Mus musculus OX=10090 GN=Gale PE=1 SV=1 Q8R059 UDP-glucose 4-epimerase OS=Mus musculus OX=10090 GN=Gale PE=1 SV=1 0 3 3 0.2742 0 1 1 1 389.92551 1167.76197 1167.7614 0.49 0.00019 0/0 0 0 13230225 HCD 30 MS2 40.94034 630 76.158 61.1514 17734 17734 17732 QEplus033719.raw F4 666.5 489.5 646.1 644.7 603.8 729.6 71 2.99 1 FALSE 5.44E-05 0.002454 0.578 -250 81695 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKAEGSEIR [K].lkAEGSEIR.[L] N-Term(TMT6plex); K2(TMT6plex) 13 P09103 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2 P09103; Q3URP6; Q3TWE3; Q3U738; Q3TT76; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; Q3UA23; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 1 3 3 0.3881 0 1 1 1 487.63309 1460.88471 1460.8837 0.69 0.00034 0/0 0 0 124903080 HCD 30 MS2 7.219565 948.6 14.952 61.1537 17735 17735 17732 QEplus033719.raw F4 817.4 1134.3 1126.7 876 869.5 867.8 408 2.68 1 FALSE 5.44E-05 0.002419 0.58 -250 81698 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLVYESDK [R].hLVYESDk.[N] N-Term(TMT6plex); K8(TMT6plex) 1 Q05186 Reticulocalbin-1 OS=Mus musculus OX=10090 GN=Rcn1 PE=1 SV=1 Q05186 Reticulocalbin-1 OS=Mus musculus OX=10090 GN=Rcn1 PE=1 SV=1 0 3 3 0.5261 0 1 1 1 483.61005 1448.81559 1448.81495 0.44 0.00021 0/0 0 0 49812592 HCD 30 MS2 8.889165 678.1 33.738 61.1559 17736 17736 17732 QEplus033719.raw F4 701.8 584.7 732.1 590.9 827.9 631.4 473 3.06 1 FALSE 1.14E-05 0.0003982 0.742 -250 81707 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLEEPSLR [K].rLEEPSLR.[C] N-Term(TMT6plex) 7 E9PUD2 Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1 E9PUD2; Q8K1M6-3; A0A2U3TZ67; Q8K1M6-4; Q8K1M6; Q8K1M6-2; Q3U4P3 Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1; Isoform 3 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1; Isoform 4 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=2; Isoform 2 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein (Fragment) OS=Mus musculus OX=10090 GN=Dnm1l PE=2 SV=1 1 3 3 0.3569 0 1 1 1 410.24512 1228.7208 1228.7211 -0.25 -0.0001 0/0 0 0 15670366 HCD 30 MS2 66.42854 722.2 45.106 61.1604 17738 17738 17732 QEplus033719.raw F4 774.1 506.5 721.5 602 774.9 954.2 333 3.11 1 FALSE 1.14E-05 0.0001785 0.809 -250 81715 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGSEVESVK [K].kGSEVESVk.[E] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 1 P68181 cAMP-dependent protein kinase catalytic subunit beta OS=Mus musculus OX=10090 GN=Prkacb PE=1 SV=2 P68181 cAMP-dependent protein kinase catalytic subunit beta OS=Mus musculus OX=10090 GN=Prkacb PE=1 SV=2 1 3 3 0.5912 0 1 1 1 550.67352 1650.00602 1650.0041 1.16 0.00064 0/0 0 0 12342551 HCD 30 MS2 16.76722 1171.5 110 61.1629 17739 17739 17732 QEplus033719.raw F4 1324.9 851.9 1177.2 1041.7 1469.8 1163.5 326 3.4 1 FALSE 1.14E-05 6.04E-06 1.089 -250 81739 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQPQFQNMR [R].dQPQFQNMR.[Q] N-Term(TMT6plex) 5 Q3TN85 UV excision repair protein RAD23 homolog A (Fragment) OS=Mus musculus OX=10090 GN=Rad23a PE=1 SV=1 Q8BRA9; Q3TN85; F6YL88; P54726; Q8CAP3 Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; UV excision repair protein RAD23 homolog A (Fragment) OS=Mus musculus OX=10090 GN=Rad23a PE=1 SV=1; UV excision repair protein RAD23 (Fragment) OS=Mus musculus OX=10090 GN=Rad23a PE=1 SV=1; UV excision repair protein RAD23 homolog A OS=Mus musculus OX=10090 GN=Rad23a PE=1 SV=2; UV excision repair protein RAD23 OS=Mus musculus OX=10090 GN=Rad23a PE=1 SV=1 0 2 2 0.4648 0 1 1 1 696.84973 1392.69219 1392.68915 2.18 0.00152 0/0 0 0 5619856.5 HCD 30 MS2 0 538.4 110 61.1704 17742 17742 17732 QEplus033719.raw F4 591 429.6 580.4 504.3 542 583 123 2.84 1 FALSE 1.14E-05 7.68E-05 0.879 -250 81750 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVFNSETPSR [R].tVFNSETPSR.[Q-] N-Term(TMT6plex) 5 Q3UDC3 Target of Myb protein 1 OS=Mus musculus OX=10090 GN=Tom1 PE=1 SV=1 Q3UDC3; A0A1D5RM84; O88746; A0A1D5RM45; A0A1D5RM51 Target of Myb protein 1 OS=Mus musculus OX=10090 GN=Tom1 PE=1 SV=1; Target of Myb protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Tom1 PE=1 SV=1; Target of Myb protein 1 OS=Mus musculus OX=10090 GN=Tom1 PE=1 SV=1; Target of Myb protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Tom1 PE=1 SV=1; Target of Myb protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Tom1 PE=1 SV=1 0 2 2 0.4742 0 1 1 1 683.86481 1366.72234 1366.71641 4.34 0.00296 0/0 0 0 4439578 HCD 30 MS2 18.43348 522.6 110 61.1803 17745 17745 17743 QEplus033719.raw F4 560 405 592 549.6 436.7 592.3 294 3.1 1 FALSE 1.14E-05 7.23E-06 1.074 -250 81759 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELIECAR [RK].eLIEcAR.[SR] N-Term(TMT6plex); C5(Carbamidomethyl) 13 A0A1L1SQ51; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1;Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q71LX4; Q68FD6; A0A1L1SRI1; Q80TM2; A0A1L1SQ51; B2RY15; Q8CHG4; Q8CDM9; Q0V930; Q3UHS6; Q3TBC3; E9PUM4; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=3; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; MKIAA0320 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.0556 0 1 1 1 560.30548 1119.60369 1119.60296 0.65 0.00036 0/0 0 0 52115656 HCD 30 MS2 43.31501 671 20.272 61.1825 17746 17746 17743 QEplus033719.raw F4 655.9 545.9 687.4 562.6 851.7 722.4 249 2.34 2 FALSE 0.0008268 0.01135 0.383 -250 81773 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FTVETR [KER].fTVETR.[GS] N-Term(TMT6plex) 7 B9EKP5; Q8VHX6 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1;Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; Q8VHX6-2; Q8VHX6; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.2768 0 1 1 1 491.28134 981.55541 981.55666 -1.28 -0.00063 0/0 0 0 30716800 HCD 30 MS2 39.61451 1196.1 46.782 61.187 17748 17748 17743 QEplus033719.raw F4 1224.2 929.7 1342.8 1035.1 1307.7 1337.4 70 2.24 2 FALSE 0.009405 0.1767 -0.114 -250 81781 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVSIEEGERK [R].qVSIEEGERk.[A] N-Term(TMT6plex); K10(TMT6plex) 3 Q0PD54 Rab6A OS=Mus musculus OX=10090 GN=Rab6a PE=2 SV=1 P35279-2; D3YV69; Q0PD54 Isoform 2 of Ras-related protein Rab-6A OS=Mus musculus OX=10090 GN=Rab6a; Ras-related protein Rab-6A OS=Mus musculus OX=10090 GN=Rab6a PE=1 SV=1; Rab6A OS=Mus musculus OX=10090 GN=Rab6a PE=2 SV=1 1 3 3 0.5288 0 1 1 1 544.98279 1632.93381 1632.93211 1.04 0.00057 0/0 0 0 30387588 HCD 30 MS2 31.3644 1122.6 42.797 61.1893 17749 17749 17743 QEplus033719.raw F4 1194.2 911.9 1246.9 1040.8 1202.1 1139.9 427 4.16 1 FALSE 1.14E-05 1.75E-08 1.571 -250 81808 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVIAVCR [K].kVIAVcR.[Y] N-Term(TMT6plex); K1(TMT6plex); C6(Carbamidomethyl) 1 P23475 X-ray repair cross-complementing protein 6 OS=Mus musculus OX=10090 GN=Xrcc6 PE=1 SV=5 P23475 X-ray repair cross-complementing protein 6 OS=Mus musculus OX=10090 GN=Xrcc6 PE=1 SV=5 1 3 3 0.5388 0 1 1 1 435.28128 1303.82929 1303.82843 0.66 0.00029 0/0 0 0 15067846 HCD 30 MS2 37.08894 983.5 102.321 61.1962 17752 17752 17743 QEplus033719.raw F4 1196.8 830.5 1102.7 730.8 1017.8 1022.3 241 2.58 1 FALSE 0.0002019 0.004083 0.525 -250 81818 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYESDPVK [R].gYESDPVk.[A] N-Term(TMT6plex); K8(TMT6plex) 2 Q64511 DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2 F6XX57; Q64511 DNA topoisomerase 2-beta (Fragment) OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=1; DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2 0 2 2 0.4733 0 1 1 1 676.87653 1352.74578 1352.7462 -0.32 -0.00021 0/0 0 0 13184298 HCD 30 MS2 32.26645 1098.5 110 61.1987 17753 17753 17743 QEplus033719.raw F4 1019.1 1096.2 1375.5 820.5 1224.3 1055.4 303 2.43 1 FALSE 1.14E-05 0.0004877 0.724 -250 81837 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YQAAVSK [K].yQAAVSk.[Q] N-Term(TMT6plex); K7(TMT6plex) 5 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q8CD09; Q9ERG0; Q8C7S2; Q8C3R7; Q8BT15 LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 0 2 2 0.4873 0 1 1 1 612.87189 1224.7365 1224.73524 1.02 0.00063 0/0 0 0 90067104 HCD 30 MS2 21.63993 980 24.527 61.2108 17757 17757 17754 QEplus033719.raw F4 932.3 975.8 1239.1 639.2 1105.6 988.3 191 2.75 1 FALSE 0.0008805 0.01226 0.369 -250 81847 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RIEYIEAR [R].rIEYIEAR.[V] N-Term(TMT6plex) 1 Q91VR8 Protein BRICK1 OS=Mus musculus OX=10090 GN=Brk1 PE=1 SV=1 Q91VR8 Protein BRICK1 OS=Mus musculus OX=10090 GN=Brk1 PE=1 SV=1 1 3 3 0.5208 0 1 1 1 426.91672 1278.7356 1278.73675 -0.9 -0.00038 0/0 0 0 16075310 HCD 30 MS2 38.2788 448.8 68.181 61.213 17758 17758 17754 QEplus033719.raw F4 498.1 332.2 499.1 357.2 490.9 515.3 473 3.61 1 FALSE 1.14E-05 0.0002053 0.797 -250 81862 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous INQTYQQQYGR [R].iNQTYQQQYGR.[S] N-Term(TMT6plex) 8 Q7TMN7 Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1 Q7TMN7; S4R1F2; Q9R0V2; D3Z0S1; A0A0N4SV57; P97429; A0A0N4SW89; Q8BSL2 Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin A4 OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=4; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1 0 2 2 0.6923 0 1 1 1 814.42358 1627.83989 1627.83898 0.56 0.00045 0/0 0 0 10831260 HCD 30 MS2 8.382401 395.3 110 61.2181 17760 17760 17754 QEplus033719.raw F4 356 454.1 481.8 331.3 398.4 350.3 268 4.29 1 FALSE 1.14E-05 7.28E-09 1.643 -250 81881 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVQVYR [K].vVQVYR.[K] N-Term(TMT6plex) 10 Q4FZH2 Ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1 B1ARA5; A0A2I3BPN8; F7CGP0; B2RX86; A3KGS3; A3KGS3-2; A0A0A0MQD7; Q3U7N1; B1ARA3; Q4FZH2 60S ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1; Ral GTPase-activating protein subunit alpha-2 OS=Mus musculus OX=10090 GN=Ralgapa2 PE=1 SV=1; Ral GTPase-activating protein subunit alpha-2 (Fragment) OS=Mus musculus OX=10090 GN=Ralgapa2 PE=1 SV=1; A230067G21Rik protein OS=Mus musculus OX=10090 GN=Ralgapa2 PE=2 SV=1; Ral GTPase-activating protein subunit alpha-2 OS=Mus musculus OX=10090 GN=Ralgapa2 PE=1 SV=2; Isoform 2 of Ral GTPase-activating protein subunit alpha-2 OS=Mus musculus OX=10090 GN=Ralgapa2; Ral GTPase-activating protein subunit alpha-2 OS=Mus musculus OX=10090 GN=Ralgapa2 PE=1 SV=1; KOW domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; 60S ribosomal protein L26 (Fragment) OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1; Ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1 0 2 2 0.4242 0 1 1 1 496.80859 992.60991 992.60903 0.89 0.00044 0/0 0 0 8740809 HCD 30 MS2 38.31683 1448.7 110 61.2231 17762 17762 17754 QEplus033719.raw F4 1531.9 1249.4 1614 1313.8 1493.5 1489.3 81 1.98 1 FALSE 0.004122 0.07582 0.072 -250 81891 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KNELEQK [R].kNELEQk.[M] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 3 O35593 26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus OX=10090 GN=Psmd14 PE=1 SV=2 Q9CSU2; O35593; Q3UD26 26S proteasome regulatory subunit RPN11 (Fragment) OS=Mus musculus OX=10090 GN=Psmd14 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus OX=10090 GN=Psmd14 PE=1 SV=2; 26S proteasome regulatory subunit RPN11 OS=Mus musculus OX=10090 GN=Psmd14 PE=2 SV=1 1 3 3 0.0426 0 1 1 1 525.9942 1575.96805 1575.96732 0.47 0.00024 0/0 0 0 7469481.5 HCD 30 MS2 47.91645 1283 90.936 61.2253 17763 17763 17754 QEplus033719.raw F4 1608.5 921.7 1408.6 1358.5 1166.5 1234.5 391 2.82 1 FALSE 0.004441 0.07968 0.062 -250 81910 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYSEAHEISK [K].aYSEAHEISk.[E] N-Term(TMT6plex); K10(TMT6plex) 1 A8IP69 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 A8IP69 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 0 2 2 0.1525 0 1 1 1 796.93805 1592.86882 1592.86844 0.24 0.00019 0/0 0 0 7699369 HCD 30 MS2 0 442.1 110 61.2377 17767 17767 17765 QEplus033719.raw F4 460 404.5 429.3 504.6 584.4 269.6 389 4 1 FALSE 1.14E-05 3.25E-08 1.52 -250 81924 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLEPEK [R].gLEPEk.[I] N-Term(TMT6plex); K6(TMT6plex) 1 Q61686 Chromobox protein homolog 5 OS=Mus musculus OX=10090 GN=Cbx5 PE=1 SV=1 Q61686 Chromobox protein homolog 5 OS=Mus musculus OX=10090 GN=Cbx5 PE=1 SV=1 0 2 2 0.2907 0 1 1 1 565.84534 1130.6834 1130.68215 1.11 0.00063 0/0 0 0 40597576 HCD 30 MS2 34.17324 1063.3 25.447 61.2422 17769 17769 17765 QEplus033719.raw F4 1142.8 889.6 1145.2 802.6 1343.7 1055.8 371 1.72 1 FALSE 0.006477 0.1039 -0.004 -250 81934 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MCHSDWK [K].mcHSDWk.[S] N-Term(TMT6plex); C2(Carbamidomethyl); K7(TMT6plex) 4 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087; Q60785; Q99LL6 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4; Alpha-1 type I procollagen (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1; Col1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1 0 3 3 0.7467 0 1 1 1 474.57367 1421.70646 1421.707 -0.38 -0.00018 0/0 0 0 37503060 HCD 30 MS2 22.22602 1208.2 45.894 61.2445 17770 17770 17765 QEplus033719.raw F4 1265.6 1105.4 1416.4 1044.5 1129.9 1287.6 152 3.75 1 FALSE 5.44E-05 0.002629 0.572 -250 81942 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQAEEADEQANAHLTK [K].rQAEEADEQANAHLTk.[F] N-Term(TMT6plex); K16(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 5 5 0.6256 0 1 1 1 454.64517 2269.19675 2269.19369 1.35 0.00061 0/0 0 0 17018152 HCD 30 MS2 34.58295 352 30.384 61.2467 17771 17771 17765 QEplus033719.raw F4 449.6 184.2 339.8 523.4 230 384.8 390 4.3 1 FALSE 1.14E-05 1.69E-08 1.574 -250 81970 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EADQGAYTCEAMNSR [K].eADQGAYTcEAMNSR.[G] N-Term(TMT6plex); C9(Carbamidomethyl) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.8535 0 1 1 1 966.42554 1931.8438 1931.84249 0.68 0.00065 0/0 0 0 4246240.5 HCD 30 MS2 0 250.1 110 61.2568 17775 17775 17765 QEplus033719.raw F4 227.7 258.3 346.9 266.9 168.5 232.3 19 5.05 2 FALSE 1.14E-05 9.56E-15 2.76 -250 81974 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YLMGER [R].yLMGER.[L] N-Term(TMT6plex) 11 A0A1B0GSX0 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1 A0A1B0GQX5; Q3TI99; D3YZQ9; Q3THB4; Q3UIC3; Q3UDU4; Q99K20; A0A1B0GSR9; Q3TCI7; A0A1B0GSX0; P06151 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=2; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3 0 2 2 0.4867 0 1 1 1 499.2709 997.53453 997.53382 0.72 0.00036 0/0 0 0 43056580 HCD 30 MS2 14.56366 1084.5 44.035 61.2641 17777 17777 17776 QEplus033719.raw F4 1085.5 746.9 1088.1 1197.2 1137.9 1251.3 95 2.26 1 FALSE 0.004198 0.07676 0.07 -250 81985 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTLTQIK [K].hTLTQIk.[D] N-Term(TMT6plex); K7(TMT6plex) 6 Q52KG9 "Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1" Q52KG9; Q3TI62; Q8VEI1; Q3TW97; Q3TI05; Q3TIX8 "Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Cct6a protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1" 0 3 3 0.4833 0 1 1 1 433.61182 1298.8209 1298.81964 0.97 0.00042 0/0 0 0 43055176 HCD 30 MS2 25.38256 666.3 28.347 61.2689 17779 17779 17776 QEplus033719.raw F4 733.9 535.8 758.6 583.4 691.3 695 194 3.6 1 FALSE 5.44E-05 0.002599 0.573 -250 81990 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVLEHEEVR [R].vVLEHEEVR.[A] N-Term(TMT6plex) 1 Q9QZE5 Coatomer subunit gamma-1 OS=Mus musculus OX=10090 GN=Copg1 PE=1 SV=1 Q9QZE5 Coatomer subunit gamma-1 OS=Mus musculus OX=10090 GN=Copg1 PE=1 SV=1 0 3 3 0.6436 0 1 1 1 446.92459 1338.75922 1338.75788 1 0.00045 0/0 0 0 31903112 HCD 30 MS2 35.8831 438 31.947 61.2711 17780 17780 17776 QEplus033719.raw F4 412.6 368.3 526.8 343.5 473.5 503.2 377 4.04 1 FALSE 1.14E-05 1.33E-05 1.024 -250 82028 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MCHSDWK [K].mcHSDWk.[S] N-Term(TMT6plex); C2(Carbamidomethyl); K7(TMT6plex) 4 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087; Q60785; Q99LL6 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4; Alpha-1 type I procollagen (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1; Col1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1 0 2 2 0.6979 0 1 1 1 711.35785 1421.70842 1421.707 1 0.00071 0/0 0 0 5113426 HCD 30 MS2 0 627.7 110 61.2852 17786 17786 17776 QEplus033719.raw F4 562.1 581.7 699.7 577.4 672.9 672.4 151 2.88 1 FALSE 0.000565 0.008658 0.427 -250 82045 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SISSAAPSK [K].sISSAAPSk.[E] N-Term(TMT6plex); K9(TMT6plex) 1 A2AMM0 Caveolae-associated protein 4 OS=Mus musculus OX=10090 GN=Cavin4 PE=1 SV=1 A2AMM0 Caveolae-associated protein 4 OS=Mus musculus OX=10090 GN=Cavin4 PE=1 SV=1 0 2 2 0.5542 0 1 1 1 653.39331 1305.77934 1305.77784 1.15 0.00075 0/0 0 0 18417912 HCD 30 MS2 25.92467 1108.7 110 61.295 17789 17789 17787 QEplus033719.raw F4 1310.6 601.9 1186.2 1205.6 820.7 1527.2 416 3.23 1 FALSE 1.14E-05 2.49E-06 1.162 -250 82056 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGDLMAYDRR [R].gGDLMAYDRR.[G] N-Term(TMT6plex) 12 Q5FWJ5 Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 P61979-3; Q3U9Q3; Q3TUA1; Q5FWJ5; P61979; H3BLL4; B2M1R6; Q3TG17; Q3U6X2; H3BLP7; Q3TL71; Q3TJ38 Isoform 3 of Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 1 3 3 0.5771 0 1 1 1 461.57413 1382.70783 1382.7048 2.19 0.00101 0/0 0 0 44447484 HCD 30 MS2 19.00219 610.5 31.274 61.2995 17791 17791 17787 QEplus033719.raw F4 612.8 584.7 673.7 440.3 751.3 600.2 160 4.28 1 FALSE 1.14E-05 3.07E-08 1.525 -250 82070 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTAIAICR [K].gTAIAIcR.[R] N-Term(TMT6plex); C7(Carbamidomethyl) 1 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 0 2 2 0.4914 0 1 1 1 545.81635 1090.62541 1090.62403 1.27 0.00069 0/0 0 0 38571648 HCD 30 MS2 46.89316 1024.3 25.482 61.304 17793 17793 17787 QEplus033719.raw F4 1133.6 503.2 898.3 1562.1 721.5 1326.8 223 2.32 1 FALSE 0.001591 0.02437 0.248 -250 82080 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYGGSMCAK [R].aYGGSMcAk.[C] N-Term(TMT6plex); C7(Carbamidomethyl); K9(TMT6plex) 2 Q9D1R9 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=2 Q9D1R9; A0A0G2JEY6 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=2; 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=1 0 2 2 0.7068 0 1 1 1 701.86517 1402.72307 1402.72231 0.54 0.00038 0/0 0 0 36389652 HCD 30 MS2 0 1249.9 66.895 61.3063 17794 17794 17787 QEplus033719.raw F4 1188.6 1208.9 1492 1069.1 1237.4 1303.5 155 3.99 1 FALSE 1.14E-05 4.76E-06 1.109 -250 82088 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYGGSMCAK [R].aYGGSMcAk.[C] N-Term(TMT6plex); C7(Carbamidomethyl); K9(TMT6plex) 2 Q9D1R9 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=2 Q9D1R9; A0A0G2JEY6 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=2; 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=1 0 3 3 0.6298 0 1 1 1 468.24561 1402.72226 1402.72231 -0.04 -0.00002 0/0 0 0 15652155 HCD 30 MS2 33.32292 1429.8 110 61.3088 17795 17795 17787 QEplus033719.raw F4 1469.1 1206.6 1646.9 1237.6 1446.6 1572 154 2.89 1 FALSE 0.0003996 0.007197 0.454 -250 82092 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYTYEK [R].tYTYEk.[L] N-Term(TMT6plex); K6(TMT6plex) 4 Q02248 Catenin beta-1 OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1 Q80VE7; Q02248; E9Q6A9; Q3UZT7 Ctnnb1 protein (Fragment) OS=Mus musculus OX=10090 GN=Ctnnb1 PE=2 SV=1; Catenin beta-1 OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1; Catenin beta-1 OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctnnb1 PE=2 SV=1 0 2 2 0.461 0 1 1 1 631.85492 1262.70256 1262.70328 -0.56 -0.00036 0/0 0 0 7480239.5 HCD 30 MS2 0 1101.6 110 61.3113 17796 17796 17787 QEplus033719.raw F4 991.8 903.8 1179.8 912.5 1473.9 1148 395 2.69 1 FALSE 0.002766 0.05452 0.129 -250 82104 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAEELSK [R].aAEELSk.[L] N-Term(TMT6plex); K7(TMT6plex) 5 Q80Y09 Pdcd6ip protein OS=Mus musculus OX=10090 GN=Pdcd6ip PE=2 SV=1 Q6ZPS9; Q9WU78-3; Q80Y09; Q9WU78; Q9WU78-2 MKIAA1375 protein (Fragment) OS=Mus musculus OX=10090 GN=Pdcd6ip PE=2 SV=1; Isoform 3 of Programmed cell death 6-interacting protein OS=Mus musculus OX=10090 GN=Pdcd6ip; Pdcd6ip protein OS=Mus musculus OX=10090 GN=Pdcd6ip PE=2 SV=1; Programmed cell death 6-interacting protein OS=Mus musculus OX=10090 GN=Pdcd6ip PE=1 SV=3; Isoform 2 of Programmed cell death 6-interacting protein OS=Mus musculus OX=10090 GN=Pdcd6ip 0 2 2 0.3173 0 1 1 1 603.3598 1205.71233 1205.71417 -1.53 -0.00092 0/0 0 0 7685201.5 HCD 30 MS2 0 1035.8 110 61.3211 17799 17799 17798 QEplus033719.raw F4 1085.1 752.7 1049.5 1020.4 1251 1056.2 317 3.12 1 FALSE 0.0004091 0.007415 0.45 -250 82112 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTITTTTSSSTTVGSAR [R].tTITTTTSSSTTVGSAR.[A] N-Term(TMT6plex) 2 Q0VE46 Myadm protein OS=Mus musculus OX=10090 GN=Myadm PE=1 SV=1 A0A0N4SW94; Q0VE46 Myeloid-associated differentiation marker (Fragment) OS=Mus musculus OX=10090 GN=Myadm PE=1 SV=1; Myadm protein OS=Mus musculus OX=10090 GN=Myadm PE=1 SV=1 0 2 2 0.8139 0 1 1 1 951.00775 1901.00823 1901.00248 3.02 0.00287 0/0 0 0 5073339 HCD 30 MS2 35.51673 207.9 110 61.3237 17800 17800 17798 QEplus033719.raw F4 208.4 182.4 286.7 139 175.2 255.5 329 5.91 1 FALSE 1.14E-05 6.31E-16 3.701 -250 82122 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSDMESTQDQPVK [K].gSDMESTQDQPVk.[M] N-Term(TMT6plex); K13(TMT6plex) 1 O70310 Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 O70310 Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 0 3 3 0.7917 0 1 1 1 627.32129 1879.94931 1879.94716 1.14 0.00072 0/0 0 0 18761654 HCD 30 MS2 12.39145 624.3 110 61.3262 17801 17801 17798 QEplus033719.raw F4 617.9 554.2 708.2 504.6 713.1 647.8 243 4.56 1 FALSE 1.14E-05 2.47E-07 1.353 -250 82129 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSDMESTQDQPVK [K].gSDMESTQDQPVk.[M] N-Term(TMT6plex); K13(TMT6plex) 1 O70310 Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 O70310 Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 0 2 2 0.7603 0 1 1 1 940.47833 1879.94939 1879.94716 1.18 0.00111 0/0 0 0 5830017.5 HCD 30 MS2 0 312.9 110 61.3312 17803 17803 17798 QEplus033719.raw F4 322.6 256.7 363.4 261.3 336.6 337 243 4.63 1 FALSE 1.14E-05 1.08E-12 2.37 -250 82142 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAAEAIK [K].dAAEAIk.[K] N-Term(TMT6plex); K7(TMT6plex) 8 O88844 Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2 Q3TJ51; Q0QER9; O88844; A0A087WPT4; A0A087WRS9; D3YVY3; Q8C338; A0A087WRM4 Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; IDP (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1 0 2 2 0.3043 0 1 1 1 588.35645 1175.70561 1175.70361 1.71 0.001 0/0 0 0 35668152 HCD 30 MS2 28.89218 926.8 31.155 61.338 17806 17806 17798 QEplus033719.raw F4 992.3 751.1 987.6 853.6 981.1 995 517 2.76 1 FALSE 0.0002909 0.006055 0.477 -250 82143 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAAEALK [K].dAAEALk.[K] N-Term(TMT6plex); K7(TMT6plex) 1 Q5HZJ8 Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1 0 2 2 0.3043 0 1 2 2 588.35645 1175.70561 1175.70361 1.71 0.001 0/0 0 0 35668152 HCD 30 MS2 28.89218 926.8 31.155 61.338 17806 17806 17798 QEplus033719.raw F4 992.3 751.1 987.6 853.6 981.1 995 517 2.76 1 FALSE 0.0002909 0.006055 0.477 -250 82148 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIEGLGAR [R].qIEGLGAR.[L] N-Term(TMT6plex) 1 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 0 2 2 0.3651 0 1 1 1 536.82019 1072.6331 1072.63122 1.75 0.00094 0/0 0 0 24770850 HCD 30 MS2 56.79037 1127.3 35.879 61.3403 17807 17807 17798 QEplus033719.raw F4 1240.8 902.2 1158.4 923.1 1433.3 1105.7 350 2.41 1 FALSE 5.44E-05 0.002452 0.579 -250 82157 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EADQGAYTCEAMNSR [K].eADQGAYTcEAMNSR.[G] N-Term(TMT6plex); C9(Carbamidomethyl) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 3 3 0.8161 0 1 1 1 644.61926 1931.84323 1931.84249 0.38 0.00025 0/0 0 0 21640350 HCD 30 MS2 21.30758 420.9 110 61.3428 17808 17808 17798 QEplus033719.raw F4 403.4 345.9 475.9 394 430.2 476.1 22 5.98 2 FALSE 1.14E-05 2.06E-12 2.317 -250 82162 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTLTQIK [K].hTLTQIk.[D] N-Term(TMT6plex); K7(TMT6plex) 6 Q52KG9 "Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1" Q52KG9; Q3TI62; Q8VEI1; Q3TW97; Q3TI05; Q3TIX8 "Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Cct6a protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1" 0 2 2 0.5902 0 1 1 1 649.91351 1298.81975 1298.81964 0.08 0.00005 0/0 0 0 20884954 HCD 30 MS2 13.21045 1293.4 110 61.3526 17811 17811 17809 QEplus033719.raw F4 1379.9 1092.5 1433.3 1004.3 1454.1 1396.1 194 3.27 1 FALSE 0.0002518 0.005068 0.5 -250 82169 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLLDNDGK [R].hLLDNDGk.[DK] N-Term(TMT6plex); K8(TMT6plex) 14 Q8CE80 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1 Q8CE04; P51125-4; P51125-7; Q921U7; P51125-6; Q8CB83; Q8C281; Q8CE80; Q3TTN2; Q8BS37; P51125; A0A1Y7VJN8; P51125-3; P51125-2 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 4 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Isoform 7 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 6 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=2 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=2 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=2 SV=2; Calpastatin OS=Mus musculus OX=10090 GN=Cast PE=1 SV=2; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 3 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Isoform 2 of Calpastatin OS=Mus musculus OX=10090 GN=Cast 0 3 3 0.36 0 1 1 1 457.2663 1369.78434 1369.78398 0.26 0.00012 0/0 0 0 21712288 HCD 30 MS2 22.92177 745 65.265 61.3548 17812 17812 17809 QEplus033719.raw F4 754.5 592.9 815.1 597.9 897.4 812 326 3.5 1 FALSE 1.14E-05 0.0006852 0.695 -250 82179 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVTEYK [K].tVTEYk.[I] N-Term(TMT6plex); K6(TMT6plex) 2 Q9Z1D1 Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=1 SV=2 Q9Z1D1; Q3THA0 Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=1 SV=2; Eukaryotic translation initiation factor 3 subunit G OS=Mus musculus OX=10090 GN=Eif3g PE=2 SV=1 0 2 2 0.35 0 1 1 1 599.85858 1198.70989 1198.70836 1.27 0.00076 0/0 0 0 9022481 HCD 30 MS2 64.93861 1551.1 110 61.3574 17813 17813 17809 QEplus033719.raw F4 1856.5 1131.7 1722.9 1448.7 1586 1560.8 227 2.2 1 FALSE 0.002148 0.04019 0.174 -250 82186 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LISPTGGR [K].lISPTGGR.[M] N-Term(TMT6plex) 2 Q3U2P1 Protein transport protein Sec24A OS=Mus musculus OX=10090 GN=Sec24a PE=1 SV=1 Q3U2P1; A2AA71 Protein transport protein Sec24A OS=Mus musculus OX=10090 GN=Sec24a PE=1 SV=1; Protein transport protein Sec24A OS=Mus musculus OX=10090 GN=Sec24a PE=1 SV=1 0 2 2 0.219 0 1 1 1 515.31378 1029.62029 1029.62541 -4.98 -0.00256 0/0 0 0 7861964 HCD 30 MS2 29.49765 1175.2 110 61.3599 17814 17814 17809 QEplus033719.raw F4 1208.1 957.4 1134.6 1011.1 1397.6 1342.7 282 2.1 1 FALSE 0.004181 0.07657 0.071 -250 82196 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDTNEWNK [K].sDTNEWNk.[N] N-Term(TMT6plex); K8(TMT6plex) 2 Q9EP71 Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1 Q9EP71; A0A2I3BPY7 Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1; Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1 0 2 2 0.6486 0 1 1 1 726.38025 1451.75322 1451.75308 0.1 0.00007 0/0 0 0 3823407.25 HCD 30 MS2 0 492.8 110 61.3624 17815 17815 17809 QEplus033719.raw F4 459.5 527.3 516.1 368.9 601.6 483.2 257 3.33 1 FALSE 1.14E-05 0.0001926 0.803 -250 82201 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CFTCGK [R].cFTcGk.[I] N-Term(TMT6plex); C1(Carbamidomethyl); C4(Carbamidomethyl); K6(TMT6plex) 1 P62876 "DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Mus musculus OX=10090 GN=Polr2l PE=3 SV=1" P62876 "DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Mus musculus OX=10090 GN=Polr2l PE=3 SV=1" 0 2 2 0.5526 0 1 1 1 615.82239 1230.6375 1230.63752 -0.02 -0.00001 0/0 0 0 3561752.75 HCD 30 MS2 34.95254 952.2 110 61.3649 17816 17816 17809 QEplus033719.raw F4 979.7 860.3 1015.8 728.8 1058.4 1070.1 149 1.9 1 FALSE 0.004139 0.07612 0.072 -250 82215 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAEGAHQGDPLSR [K].iAEGAHQGDPLSR.[Y] N-Term(TMT6plex) 2 Q9QZ08 N-acetyl-D-glucosamine kinase OS=Mus musculus OX=10090 GN=Nagk PE=1 SV=3 Q9QZ08; Q9D997 N-acetyl-D-glucosamine kinase OS=Mus musculus OX=10090 GN=Nagk PE=1 SV=3; GlcNAc kinase OS=Mus musculus OX=10090 GN=Nagk PE=1 SV=1 0 3 3 0.6634 0 1 1 1 527.28656 1579.84513 1579.83898 3.89 0.00205 0/0 0 0 13156649 HCD 30 MS2 16.13832 955.1 102.475 61.3695 17818 17818 17809 QEplus033719.raw F4 970.2 829 1095.3 850 1044.2 942 362 3.06 1 FALSE 1.14E-05 1.09E-06 1.23 -250 82222 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPVAVQGSK [K].sPVAVQGSk.[I] N-Term(TMT6plex); K9(TMT6plex) 2 O35459 "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Mus musculus OX=10090 GN=Ech1 PE=1 SV=1" O35459; F7B227 "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Mus musculus OX=10090 GN=Ech1 PE=1 SV=1; Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Ech1 PE=1 SV=1" 0 2 2 0.5752 0 1 1 1 665.90955 1330.81182 1330.80947 1.76 0.00117 0/0 0 0 10563529 HCD 30 MS2 20.59476 813.4 110 61.372 17819 17819 17809 QEplus033719.raw F4 1105.6 678.5 817.4 705.2 824.7 748.7 473 3.39 1 FALSE 1.14E-05 5.72E-07 1.283 -250 82238 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLEGSDIDTR [R].dLEGSDIDTR.[R] N-Term(TMT6plex) 3 Q9ERK4 Exportin-2 OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1 F6ZEW4; Q9ERK4; E9Q1T9 Exportin-2 (Fragment) OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1; Exportin-2 OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1; Chromosome segregation 1-like protein OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1 0 2 2 0.6648 0 1 1 1 675.34204 1349.67681 1349.6746 1.63 0.0011 0/0 0 0 23400936 HCD 30 MS2 55.12943 626 58.11 61.3816 17822 17822 17820 QEplus033719.raw F4 640.7 532.7 651.9 591 707.7 631.7 154 3.52 1 FALSE 1.14E-05 2.01E-05 0.99 -250 82254 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLPDGLTR [K].rLPDGLTR.[R] N-Term(TMT6plex) 2 P49718 DNA replication licensing factor MCM5 OS=Mus musculus OX=10090 GN=Mcm5 PE=1 SV=2 P49718; Q8BQ03 DNA replication licensing factor MCM5 OS=Mus musculus OX=10090 GN=Mcm5 PE=1 SV=2; DNA helicase OS=Mus musculus OX=10090 GN=Mcm5 PE=2 SV=1 1 3 3 0.5632 0 1 1 1 386.23816 1156.69992 1156.69997 -0.04 -0.00002 0/0 0 0 23711164 HCD 30 MS2 28.03847 347.4 51.882 61.3861 17824 17824 17820 QEplus033719.raw F4 332.2 315.9 336.8 233.9 512.1 353.5 235 3.64 1 FALSE 1.14E-05 2.40E-05 0.975 -250 82261 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSVSLPK [K].hSVSLPk.[E] N-Term(TMT6plex); K7(TMT6plex) 3 Q78IK4 MICOS complex subunit Mic27 OS=Mus musculus OX=10090 GN=Apool PE=1 SV=1 Q78IK4; B1AV14; Q9CZB4 MICOS complex subunit Mic27 OS=Mus musculus OX=10090 GN=Apool PE=1 SV=1; MICOS complex subunit OS=Mus musculus OX=10090 GN=Apool PE=1 SV=1; MICOS complex subunit OS=Mus musculus OX=10090 GN=Apool PE=2 SV=1 0 3 3 0.3129 0 1 1 1 409.2612 1225.76905 1225.76688 1.77 0.00072 0/0 0 0 19051878 HCD 30 MS2 43.5601 626.4 38.65 61.3883 17825 17825 17820 QEplus033719.raw F4 761 442.5 616.5 572.7 693.7 671.9 193 2.94 1 FALSE 0.0001603 0.0035 0.542 -250 82275 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTFDNAETK [R].gTFDNAETk.[K] N-Term(TMT6plex); K9(TMT6plex) 1 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 2 2 0.5164 0 1 1 1 720.89038 1440.77349 1440.77348 0 0 0/0 0 0 7022964 HCD 30 MS2 0 414.4 110 61.3933 17827 17827 17820 QEplus033719.raw F4 420.3 326.9 457 367.9 422.8 491.7 314 3.35 1 FALSE 1.14E-05 2.05E-06 1.178 -250 82296 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTITTTTSSSTTVGSAR [R].tTITTTTSSSTTVGSAR.[A] N-Term(TMT6plex) 2 Q0VE46 Myadm protein OS=Mus musculus OX=10090 GN=Myadm PE=1 SV=1 A0A0N4SW94; Q0VE46 Myeloid-associated differentiation marker (Fragment) OS=Mus musculus OX=10090 GN=Myadm PE=1 SV=1; Myadm protein OS=Mus musculus OX=10090 GN=Myadm PE=1 SV=1 0 3 3 0.8076 0 1 1 1 634.33948 1901.00388 1901.00248 0.74 0.00047 0/0 0 0 45748056 HCD 30 MS2 14.53122 320.7 50.118 61.4006 17830 17830 17820 QEplus033719.raw F4 315.4 290.1 362.6 265 336.4 354.7 322 6.08 1 FALSE 1.14E-05 7.06E-11 2.026 -250 82305 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQPMAAQAASYR [R].tQPMAAQAASYR.[A] N-Term(TMT6plex) 4 Q8C2Q3 RNA-binding protein 14 OS=Mus musculus OX=10090 GN=Rbm14 PE=1 SV=1 Q8C2Q3; E9QL13; Q8C2Q3-2; Q3U6A2 RNA-binding protein 14 OS=Mus musculus OX=10090 GN=Rbm14 PE=1 SV=1; RNA-binding protein 14 OS=Mus musculus OX=10090 GN=Rbm14 PE=1 SV=2; Isoform 2 of RNA-binding protein 14 OS=Mus musculus OX=10090 GN=Rbm14; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rbm14 PE=2 SV=1 0 2 2 0.7147 0 1 1 1 762.3963 1523.78533 1523.78378 1.02 0.00077 0/0 0 0 9556036 HCD 30 MS2 16.04358 422.5 110 61.408 17832 17832 17831 QEplus033719.raw F4 432.3 435.3 468.8 316 499.2 383.3 233 3.33 1 FALSE 1.14E-05 2.84E-10 1.911 -250 82312 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEPGGAGADGVPGKDGPR [K].gEPGGAGADGVPGkDGPR.[G] N-Term(TMT6plex); K14(TMT6plex) 8 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; A0A087WPS3; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen alpha-1(III) chain (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 1 3 3 0.7832 0 1 1 1 684.70129 2052.08933 2052.08744 0.92 0.00063 0/0 0 0 8214961 HCD 30 MS2 30.28067 505 110 61.4105 17833 17833 17831 QEplus033719.raw F4 440.5 644.9 612.1 354.8 501.8 476.2 397 5.35 1 FALSE 1.14E-05 6.31E-16 3.217 -250 82326 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPQFQK [R].nPQFQk.[L] N-Term(TMT6plex); K6(TMT6plex) 5 P06745 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4 B2RXT5; P06745; A0A0U1RQ72; A0A0U1RP97; B7ZWL9 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4; Glucose-6-phosphate isomerase 1 OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase 1 (Fragment) OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1 0 2 2 0.3096 0 1 1 1 610.36401 1219.72075 1219.71993 0.67 0.00041 0/0 0 0 20824860 HCD 30 MS2 49.02548 1324.9 54.774 61.415 17835 17835 17831 QEplus033719.raw F4 1450.6 1035.5 1369.6 1350.9 1329 1413.8 453 2.39 1 FALSE 0.002636 0.05237 0.135 -250 82336 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFAESQPK [K].kFAESQPk.[K] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 2 Q9D8N0 Elongation factor 1-gamma OS=Mus musculus OX=10090 GN=Eef1g PE=1 SV=3 Q8R1N8; Q9D8N0 Eef1g protein OS=Mus musculus OX=10090 GN=Eef1g PE=2 SV=1; Elongation factor 1-gamma OS=Mus musculus OX=10090 GN=Eef1g PE=1 SV=3 1 3 3 0.5758 0 1 1 1 541.33496 1621.99033 1621.98805 1.4 0.00076 0/0 0 0 19137478 HCD 30 MS2 42.88316 1293.8 60.036 61.4173 17836 17836 17831 QEplus033719.raw F4 1502.5 984.2 1312 1176.3 1349.8 1438.2 291 3.63 1 FALSE 1.14E-05 1.36E-06 1.212 -250 82345 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DFDDEK [R].dFDDEk.[I] N-Term(TMT6plex); K6(TMT6plex) 6 Q9JMD0 BUB3-interacting and GLEBS motif-containing protein ZNF207 OS=Mus musculus OX=10090 GN=Znf207 PE=1 SV=1 Q9JMD0-2; Q9JMD0; Q8CCB2; Q9JMD0-4; Q9JMD0-3; B1AQG7 Isoform 2 of BUB3-interacting and GLEBS motif-containing protein ZNF207 OS=Mus musculus OX=10090 GN=Znf207; BUB3-interacting and GLEBS motif-containing protein ZNF207 OS=Mus musculus OX=10090 GN=Znf207 PE=1 SV=1; Zinc finger protein 207 OS=Mus musculus OX=10090 GN=Zfp207 PE=1 SV=1; Isoform 4 of BUB3-interacting and GLEBS motif-containing protein ZNF207 OS=Mus musculus OX=10090 GN=Znf207; Isoform 3 of BUB3-interacting and GLEBS motif-containing protein ZNF207 OS=Mus musculus OX=10090 GN=Znf207; Zinc finger protein 207 (Fragment) OS=Mus musculus OX=10090 GN=Zfp207 PE=1 SV=1 0 2 2 0.2143 0 1 1 1 613.8205 1226.63371 1226.6305 2.62 0.00161 0/0 0 0 17215400 HCD 30 MS2 45.99477 1228.4 50.969 61.4195 17837 17837 17831 QEplus033719.raw F4 1190.8 1156.1 1317.5 995 1482.2 1229.1 153 2.1 1 FALSE 0.006356 0.1026 0 -250 82355 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLEHAK [K].lLEHAk.[G] N-Term(TMT6plex); K6(TMT6plex) 1 Q91YN9 BAG family molecular chaperone regulator 2 OS=Mus musculus OX=10090 GN=Bag2 PE=1 SV=1 Q91YN9 BAG family molecular chaperone regulator 2 OS=Mus musculus OX=10090 GN=Bag2 PE=1 SV=1 0 3 3 0.1913 0 1 1 1 390.25308 1168.74469 1168.74541 -0.62 -0.00024 0/0 0 0 16317811 HCD 30 MS2 53.44449 769.4 36.491 61.4218 17838 17838 17831 QEplus033719.raw F4 917.5 454.6 730.6 812.5 771.9 929.4 121 2.77 1 FALSE 0.001591 0.02457 0.247 -250 82372 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTTVSSDSVAK [R].dTTVSSDSVAk.[F] N-Term(TMT6plex); K11(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.609 0 1 1 1 784.4342 1567.86113 1567.85794 2.04 0.0016 0/0 0 0 8650327 HCD 30 MS2 0 408.7 110 61.4266 17840 17840 17831 QEplus033719.raw F4 470.2 78.5 305.5 780.2 99.9 717.7 380 3.99 2 FALSE 1.14E-05 6.23E-10 1.846 -250 82378 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSGTGSAGATIR [R].lSGTGSAGATIR.[L] N-Term(TMT6plex) 7 Q66JR7 Pgm2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1 A2CEK3; Q99JW6; Q66JR7; Q9D0F9; Q3U6X6; Q5RJV4; Q7TNU0 Phosphoglucomutase-1 OS=Mus musculus OX=10090 GN=Pgm1 PE=1 SV=1; Pgm2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1; Pgm2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1; Phosphoglucomutase-1 OS=Mus musculus OX=10090 GN=Pgm1 PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1; Phosphoglucomutase 2 OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1; Pgm2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1 0 2 2 0.4814 0 1 1 1 660.37891 1319.75054 1319.74804 1.89 0.00125 0/0 0 0 13062461 HCD 30 MS2 0 666.4 110 61.4364 17843 17843 17842 QEplus033719.raw F4 695.3 477.3 699.1 757 586.5 783.3 498 3.49 1 FALSE 1.14E-05 1.12E-06 1.228 -250 82395 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQIGGPEAGK [R].aQIGGPEAGk.[S] N-Term(TMT6plex); K10(TMT6plex) 3 Q545F4 Heat shock 27 kDa protein OS=Mus musculus OX=10090 GN=Hspb1 PE=2 SV=1 Q545F4; P14602-3; P14602-2 Heat shock 27 kDa protein OS=Mus musculus OX=10090 GN=Hspb1 PE=2 SV=1; Isoform C of Heat shock protein beta-1 OS=Mus musculus OX=10090 GN=Hspb1; Isoform B of Heat shock protein beta-1 OS=Mus musculus OX=10090 GN=Hspb1 0 2 2 0.4393 0 1 1 1 693.41089 1385.8145 1385.81529 -0.57 -0.00039 0/0 0 0 48071048 HCD 30 MS2 48.69969 1022.1 23.668 61.4412 17845 17845 17842 QEplus033719.raw F4 1409.2 601.8 977.3 1201.7 834.1 1108.8 332 3.21 1 FALSE 1.14E-05 4.10E-05 0.931 -250 82414 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQILPK [R].hQILPk.[D] N-Term(TMT6plex); K6(TMT6plex) 2 Q9CQB4 Cytochrome b-c1 complex subunit 7 OS=Mus musculus OX=10090 GN=Uqcrb PE=1 SV=1 Q9CQB4; Q9D855 Cytochrome b-c1 complex subunit 7 OS=Mus musculus OX=10090 GN=Uqcrb PE=1 SV=1; Cytochrome b-c1 complex subunit 7 OS=Mus musculus OX=10090 GN=Uqcrb PE=1 SV=3 0 3 3 0.3322 0 1 1 1 398.59763 1193.77832 1193.77705 1.07 0.00042 0/0 0 0 13064973 HCD 30 MS2 38.16961 860.4 71.561 61.4457 17847 17847 17842 QEplus033719.raw F4 1178.6 509.4 736.7 816.6 1056.1 865.1 47 2.89 1 FALSE 0.002845 0.05569 0.126 -250 82423 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGFVNVR [K].sGFVNVR.[V] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.4633 0 1 1 1 504.29538 1007.58348 1007.58355 -0.06 -0.00003 0/0 0 0 11247440 HCD 30 MS2 38.5425 1195.5 110 61.4482 17848 17848 17842 QEplus033719.raw F4 1321.3 670.1 1112.9 1558 905.1 1605.8 73 1.77 2 FALSE 0.002628 0.05234 0.135 -250 82457 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLQAQLQR [R].sLQAQLQR.[L] N-Term(TMT6plex) 2 Q9EP69 Phosphatidylinositol-3-phosphatase SAC1 OS=Mus musculus OX=10090 GN=Sacm1l PE=1 SV=1 Q9EP69; A0A5F8MPK9 Phosphatidylinositol-3-phosphatase SAC1 OS=Mus musculus OX=10090 GN=Sacm1l PE=1 SV=1; Phosphatidylinositol-3-phosphatase SAC1 OS=Mus musculus OX=10090 GN=Sacm1l PE=1 SV=1 0 2 2 0.0056 2 2 2 586.85114 1172.69499 1172.69489 0.09 0.00005 0/0 0 0 13279488 HCD 30 MS2 51.33176 1333.6 110 61.4574 17852 17852 17842 QEplus033719.raw F4 1420 947.7 1401.5 1160 1458.8 1613.8 380 1.77 1 FALSE 0.001591 0.0246 0.247 -250 82471 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVEPPTK [R].qVEPPTk.[K] N-Term(TMT6plex); K7(TMT6plex) 13 Q91VK2; Q80T06 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1;Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1 Q91VK2; P57776-2; D3Z7N2; F6ZFU0; Q80T06; A0A0R4J1E2; D3YY68; E9QN08; A0A0R4J1L2; D3YZT9; P57776-3; P57776; D3YUQ9 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 2 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 3 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=3; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=8 0 2 2 0.419 0 1 1 1 628.88446 1256.76164 1256.76146 0.15 0.00009 0/0 0 0 8506640 HCD 30 MS2 46.81749 985.8 110 61.4673 17855 17855 17853 QEplus033719.raw F4 980.5 831.7 1043 813.4 1118.1 1128.2 291 2.1 2 FALSE 0.002173 0.04154 0.169 -250 82491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTHLIAK [K].tTHLIAk.[E] N-Term(TMT6plex); K7(TMT6plex) 3 Q9D8W5 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=4 Q3U8F5; Q9D8W5; B1AT36 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd12 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=4; 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=1 0 3 3 0.7896 0 1 1 1 414.60471 1241.79956 1241.79818 1.12 0.00046 0/0 0 0 78087272 HCD 30 MS2 10.41858 508.3 15.445 61.4718 17857 17857 17853 QEplus033719.raw F4 548.4 375.3 546.5 473.7 576.5 529.6 124 3.09 1 FALSE 0.001464 0.02108 0.272 -250 82519 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVEPPTK [R].qVEPPTk.[K] N-Term(TMT6plex); K7(TMT6plex) 13 Q91VK2; Q80T06 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1;Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1 Q91VK2; P57776-2; D3Z7N2; F6ZFU0; Q80T06; A0A0R4J1E2; D3YY68; E9QN08; A0A0R4J1L2; D3YZT9; P57776-3; P57776; D3YUQ9 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 2 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 3 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=3; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=8 0 2 2 0.4077 0 1 1 1 628.88446 1256.76164 1256.76146 0.15 0.00009 0/0 0 0 8506640 HCD 30 MS2 59.13581 985.8 110 61.4813 17861 17861 17853 QEplus033719.raw F4 980.5 831.7 1043 813.4 1118.1 1128.2 291 2.33 2 FALSE 0.002448 0.04864 0.146 -250 82533 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLGPEAK [R].tLGPEAk.[S] N-Term(TMT6plex); K7(TMT6plex) 7 Q8BS26; Q3TY95 Uncharacterized protein OS=Mus musculus OX=10090 GN=Akt1 PE=2 SV=1;Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1 D3Z783; F8WHG5; Q8CE74; Q8BS26; P31750; A4FUQ9; Q3TY95 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Akt1 PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Akt2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Akt1 PE=2 SV=1; RAC-alpha serine/threonine-protein kinase OS=Mus musculus OX=10090 GN=Akt1 PE=1 SV=2; Akt1 protein (Fragment) OS=Mus musculus OX=10090 GN=Akt1 PE=2 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1 0 2 2 0.4912 0 1 1 1 587.36932 1173.73137 1173.72434 5.99 0.00351 0/0 0 0 14718258 HCD 30 MS2 38.45467 1614.4 100.807 61.4859 17863 17863 17853 QEplus033719.raw F4 1729.4 1095.5 1763.3 1511.1 1574.8 2012.1 428 2.83 2 FALSE 0.001615 0.02616 0.237 -250 82553 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGVTVAK [K].dGVTVAk.[S] N-Term(TMT6plex); K7(TMT6plex) 3 P63038 "60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" D3Z2F2; D3Z7J9; P63038 "60 kDa heat shock protein, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1; 60 kDa heat shock protein, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1; 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" 0 2 2 0.3045 0 1 1 1 574.35907 1147.71086 1147.70869 1.89 0.00108 0/0 0 0 16545492 HCD 30 MS2 31.63931 1674.7 110 61.4957 17866 17866 17864 QEplus033719.raw F4 1784 1416 1753.5 1332.9 2049.9 1711.9 425 2.2 1 FALSE 0.0005848 0.008763 0.425 -250 82563 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAQGAMYR [K].iAQGAMYR.[G] N-Term(TMT6plex) 8 P14824; Q99JX6 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3;Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 Q3V2Z4; P14824; F8WIT2; Q3UI56; Q3TUI1; Q8CEX0; Q99JX6; Q3UDK4 Annexin OS=Mus musculus OX=10090 PE=2 SV=1; Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 0 2 2 0.6316 0 1 1 1 569.81635 1138.62541 1138.62403 1.22 0.00069 0/0 0 0 140104320 HCD 30 MS2 47.49443 946.6 6.389 61.498 17867 17867 17864 QEplus033719.raw F4 898.9 776.6 1031.6 869.6 1093.9 1008.8 209 2.47 2 FALSE 5.44E-05 0.001839 0.606 -250 82572 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous INAVVETGRR [K].iNAVVETGRR.[L] N-Term(TMT6plex) 4 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q62261; A0A0A0MQG2; Q5DTR4; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; MKIAA4049 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 1 3 3 0.5781 0 1 1 1 448.60403 1343.79755 1343.79566 1.4 0.00063 0/0 0 0 32078402 HCD 30 MS2 27.66804 412.9 30.745 61.5002 17868 17868 17864 QEplus033719.raw F4 410 320.6 511.7 330.7 397 507.4 341 4.48 2 FALSE 1.14E-05 2.08E-09 1.747 -250 82592 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SISSAAPSK [K].sISSAAPSk.[E] N-Term(TMT6plex); K9(TMT6plex) 1 A2AMM0 Caveolae-associated protein 4 OS=Mus musculus OX=10090 GN=Cavin4 PE=1 SV=1 A2AMM0 Caveolae-associated protein 4 OS=Mus musculus OX=10090 GN=Cavin4 PE=1 SV=1 0 3 3 0.4528 0 1 1 1 435.93048 1305.77689 1305.77784 -0.73 -0.00032 0/0 0 0 9762408 HCD 30 MS2 36.18839 622.4 110 61.5078 17871 17871 17864 QEplus033719.raw F4 664 384.7 651.1 614.7 579.7 840 460 3.07 1 FALSE 7.59E-05 0.002821 0.564 -250 82602 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSECEEQAK [R].lSEcEEQAk.[A] N-Term(TMT6plex); C4(Carbamidomethyl); K9(TMT6plex) 5 Q78PY7 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 Q78PY7; Q3UZI3; Q3TW51; Q3TRW3; Q3TJ56 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 0 2 2 0.6491 0 1 1 1 776.41028 1551.81328 1551.80888 2.84 0.0022 0/0 0 0 2116573.75 HCD 30 MS2 0 568.1 110 61.5128 17873 17873 17864 QEplus033719.raw F4 575.2 509.1 654.1 464.9 597.3 608.3 281 3.79 1 FALSE 1.14E-05 4.07E-06 1.122 -250 82610 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCHLNENIDK [K].ncHLNENIDk.[G] N-Term(TMT6plex); C2(Carbamidomethyl); K10(TMT6plex) 5 P58044 Isopentenyl-diphosphate Delta-isomerase 1 OS=Mus musculus OX=10090 GN=Idi1 PE=1 SV=1 H3BKD7; H3BLF8; P58044; G3XA48; H3BLP1 Isopentenyl-diphosphate Delta-isomerase (Fragment) OS=Mus musculus OX=10090 GN=Idi1 PE=1 SV=1; Isopentenyl-diphosphate Delta-isomerase (Fragment) OS=Mus musculus OX=10090 GN=Idi1 PE=1 SV=1; Isopentenyl-diphosphate Delta-isomerase 1 OS=Mus musculus OX=10090 GN=Idi1 PE=1 SV=1; Isopentenyl-diphosphate Delta-isomerase OS=Mus musculus OX=10090 GN=Idi1 PE=1 SV=1; Isopentenyl-diphosphate Delta-isomerase (Fragment) OS=Mus musculus OX=10090 GN=Idi1 PE=1 SV=1 0 3 3 0.6945 0 1 1 1 572.30316 1714.89493 1714.89467 0.15 0.00009 0/0 0 0 23540078 HCD 30 MS2 29.54362 909.2 78.993 61.5151 17874 17874 17864 QEplus033719.raw F4 984.6 729.7 1031.2 814.5 830.5 1064.7 263 4.55 1 FALSE 1.14E-05 3.14E-08 1.523 -250 82614 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STAGDTHLGGEDFDNR [K].sTAGDTHLGGEDFDNR.[M] N-Term(TMT6plex) 18 Q3TEK2; B7U582 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1;Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; Q3TH56; B7U582; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q9QZ38; Q3TB63; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16; P17156 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate hsc73 (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Mus musculus OX=10090 GN=Hspa2 PE=1 SV=2 0 3 3 0.8489 0 1 1 1 640.96814 1920.88987 1920.88851 0.7 0.00045 0/0 0 0 23350548 HCD 30 MS2 6.400745 457 96.148 61.5224 17876 17876 17875 QEplus033719.raw F4 464.8 410 500.9 385.2 547.1 434.3 48 5.03 2 FALSE 1.14E-05 7.68E-15 2.778 -250 82618 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPQFQK [R].nPQFQk.[L] N-Term(TMT6plex); K6(TMT6plex) 5 P06745 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4 B2RXT5; P06745; A0A0U1RQ72; A0A0U1RP97; B7ZWL9 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4; Glucose-6-phosphate isomerase 1 OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase 1 (Fragment) OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1 0 3 3 0.3004 0 1 1 1 407.24493 1219.72025 1219.71993 0.26 0.00011 0/0 0 0 19142186 HCD 30 MS2 53.69552 894.7 46.493 61.5246 17877 17877 17875 QEplus033719.raw F4 1038.5 588.4 873.7 691 1235.9 940.8 472 2.53 1 FALSE 0.007381 0.119 -0.04 -250 82627 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIQLAR [K].dIQLAR.[R] N-Term(TMT6plex) 8 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 0 2 2 0.2165 0 1 1 1 472.79016 944.57305 944.57265 0.42 0.0002 0/0 0 0 119032880 HCD 30 MS2 13.88867 734.4 9.513 61.5269 17878 17878 17875 QEplus033719.raw F4 751.1 849 832.1 457.3 922.8 593.9 249 2.31 2 FALSE 0.004692 0.08245 0.055 -250 82642 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IWYEHR [K].iWYEHR.[L] N-Term(TMT6plex) 1 P54071 "Isocitrate dehydrogenase [NADP], mitochondrial OS=Mus musculus OX=10090 GN=Idh2 PE=1 SV=3" P54071 "Isocitrate dehydrogenase [NADP], mitochondrial OS=Mus musculus OX=10090 GN=Idh2 PE=1 SV=3" 0 3 3 0.6367 0 1 1 1 378.20853 1132.61103 1132.61009 0.82 0.00031 0/0 0 0 25682946 HCD 30 MS2 11.40241 298.4 56.697 61.5314 17880 17880 17875 QEplus033719.raw F4 267.3 267.9 342.4 265 291 357 237 3.11 1 FALSE 0.002586 0.05078 0.14 -250 82652 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AECLEK [K].aEcLEk.[F] N-Term(TMT6plex); C3(Carbamidomethyl); K6(TMT6plex) 5 P58389 Serine/threonine-protein phosphatase 2A activator OS=Mus musculus OX=10090 GN=Ptpa PE=1 SV=1 Q8C0E1; A2AWE9; P58389; B7ZDE0; A2AWF0 Serine/threonine-protein phosphatase 2A activator OS=Mus musculus OX=10090 GN=Ptpa PE=2 SV=1; Serine/threonine-protein phosphatase 2A activator OS=Mus musculus OX=10090 GN=Ptpa PE=1 SV=1; Serine/threonine-protein phosphatase 2A activator OS=Mus musculus OX=10090 GN=Ptpa PE=1 SV=1; Serine/threonine-protein phosphatase 2A activator OS=Mus musculus OX=10090 GN=Ptpa PE=1 SV=1; Serine/threonine-protein phosphatase 2A activator OS=Mus musculus OX=10090 GN=Ptpa PE=1 SV=1 0 2 2 0.3066 0 1 1 1 604.34302 1207.67876 1207.67568 2.55 0.00154 0/0 0 0 12166478 HCD 30 MS2 33.19566 1322.8 110 61.5339 17881 17881 17875 QEplus033719.raw F4 1350.2 1065.1 1296 1154 1833.3 1238.2 399 2.12 1 FALSE 0.003101 0.06038 0.113 -250 82660 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTHLIAK [K].tTHLIAk.[E] N-Term(TMT6plex); K7(TMT6plex) 3 Q9D8W5 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=4 Q3U8F5; Q9D8W5; B1AT36 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd12 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=4; 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=1 0 2 2 0.6287 0 1 1 1 621.4035 1241.79973 1241.79818 1.25 0.00078 0/0 0 0 11917573 HCD 30 MS2 11.18149 1106 110 61.5364 17882 17882 17875 QEplus033719.raw F4 1124.4 882.4 1183.9 968.5 1284.8 1191.7 124 3.07 1 FALSE 0.0002719 0.005477 0.49 -250 82669 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LPAQSEPVR [R].lPAQSEPVR.[R] N-Term(TMT6plex) 1 P70460 Vasodilator-stimulated phosphoprotein OS=Mus musculus OX=10090 GN=Vasp PE=1 SV=4 P70460 Vasodilator-stimulated phosphoprotein OS=Mus musculus OX=10090 GN=Vasp PE=1 SV=4 0 2 2 0.4074 0 1 1 1 613.36096 1225.71465 1225.7102 3.63 0.00222 0/0 0 0 9496787 HCD 30 MS2 38.43472 1159.1 110 61.5389 17883 17883 17875 QEplus033719.raw F4 1189 1025 1277.3 915.7 1339.2 1208.3 237 2.43 1 FALSE 1.14E-05 8.25E-05 0.873 -250 82678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEANNLQLK [K].hEANNLQLk.[E] N-Term(TMT6plex); K9(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 3 3 0.6718 0 1 1 1 508.96945 1524.8938 1524.88985 2.59 0.00132 0/0 0 0 74166096 HCD 30 MS2 40.49616 872.7 18.356 61.5412 17884 17884 17875 QEplus033719.raw F4 878.2 809.1 961.4 687.4 1025.6 874.3 370 3.9 1 FALSE 1.14E-05 1.26E-05 1.029 -250 82701 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGSGEVYQGPAK [K].sGSGEVYQGPAk.[G] N-Term(TMT6plex); K12(TMT6plex) 3 P51660 Peroxisomal multifunctional enzyme type 2 OS=Mus musculus OX=10090 GN=Hsd17b4 PE=1 SV=3 P51660; Q3TT11; Q3UHW2 Peroxisomal multifunctional enzyme type 2 OS=Mus musculus OX=10090 GN=Hsd17b4 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsd17b4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsd17b4 PE=2 SV=1 0 2 2 0.7341 0 1 1 1 819.45026 1637.89324 1637.88991 2.03 0.00166 0/0 0 0 5413391.5 HCD 30 MS2 0 382.1 110 61.5533 17888 17888 17886 QEplus033719.raw F4 409.7 327.1 435.3 350.5 408.4 361.8 401 4.4 1 FALSE 1.14E-05 1.71E-12 2.332 -250 82719 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAGKGDVPTK [K].aAGkGDVPTk.[R] N-Term(TMT6plex); K4(TMT6plex); K10(TMT6plex) 6 Q58ET1 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=1 SV=1 Q58ET1; V9GX35; Q5EBG5; Q8CDE3; Q6P1A9; Q80UT7 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=1 SV=1; 60S ribosomal protein L7a (Fragment) OS=Mus musculus OX=10090 GN=Gm14214 PE=3 SV=1; 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=2 SV=1; 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Gm5766 PE=2 SV=1; 60S ribosomal protein L7a OS=Mus musculus OX=10090 GN=Rpl7a PE=2 SV=1; 60S ribosomal protein L7a (Fragment) OS=Mus musculus OX=10090 GN=Rpl7a PE=2 SV=1 1 3 3 0.5464 0 1 1 1 544.34235 1631.01249 1631.00952 1.82 0.00099 0/0 0 0 150457824 HCD 30 MS2 12.52216 1112.6 11.456 61.5578 17890 17890 17886 QEplus033719.raw F4 1034.4 888.2 1181.8 1028.1 1428.9 1113.9 307 2.8 1 FALSE 1.14E-05 0.0008881 0.673 -250 82758 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIVVTDGER [K].aIVVTDGER.[I] N-Term(TMT6plex) 5 Q921S3 Malic enzyme OS=Mus musculus OX=10090 GN=Me1 PE=2 SV=1 Q3TQW1; Q3TQP6; Q921S3; P06801; Q99LF5 malic domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Me1 PE=2 SV=1; Malic enzyme OS=Mus musculus OX=10090 GN=Me1 PE=1 SV=1; Malic enzyme OS=Mus musculus OX=10090 GN=Me1 PE=2 SV=1; NADP-dependent malic enzyme OS=Mus musculus OX=10090 GN=Me1 PE=1 SV=2; Me1 protein OS=Mus musculus OX=10090 GN=Me1 PE=2 SV=1 0 2 2 0.6743 0 1 1 1 594.84216 1188.67705 1188.67857 -1.28 -0.00076 0/0 0 0 19014418 HCD 30 MS2 39.09382 1439.1 110 61.5837 17900 17900 17897 QEplus033719.raw F4 1519.7 1248.4 1447.2 1033.2 1904.9 1481.3 282 3.04 1 FALSE 1.14E-05 1.19E-06 1.223 -250 82766 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSECEEQAK [R].lSEcEEQAk.[A] N-Term(TMT6plex); C4(Carbamidomethyl); K9(TMT6plex) 5 Q78PY7 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 Q78PY7; Q3UZI3; Q3TW51; Q3TRW3; Q3TJ56 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 0 3 3 0.674 0 1 1 1 517.94183 1551.81095 1551.80888 1.33 0.00069 0/0 0 0 15245341 HCD 30 MS2 48.35299 1175.7 42.81 61.5859 17901 17901 17897 QEplus033719.raw F4 1254.5 1044.1 1179.2 847.2 1649.4 1079.8 269 3.19 1 FALSE 0.0003113 0.00616 0.475 -250 82774 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVQDLEQK [K].rVQDLEQk.[M] N-Term(TMT6plex); K8(TMT6plex) 7 P42227 Signal transducer and activator of transcription 3 OS=Mus musculus OX=10090 GN=Stat3 PE=1 SV=2 P42227-3; P42227; Q3ULI4; Q6GU23; Q3U6S9; B7ZC18; Q3U5Q4 Isoform Del-701 of Signal transducer and activator of transcription 3 OS=Mus musculus OX=10090 GN=Stat3; Signal transducer and activator of transcription 3 OS=Mus musculus OX=10090 GN=Stat3 PE=1 SV=2; Signal transducer and activator of transcription OS=Mus musculus OX=10090 GN=Stat3 PE=2 SV=1; Signal transducer and activator of transcription OS=Mus musculus OX=10090 GN=Stat3 PE=2 SV=1; Signal transducer and activator of transcription OS=Mus musculus OX=10090 GN=Stat3 PE=2 SV=1; Signal transducer and activator of transcription OS=Mus musculus OX=10090 GN=Stat3 PE=1 SV=1; Signal transducer and activator of transcription OS=Mus musculus OX=10090 GN=Stat3 PE=2 SV=1 1 3 3 0.4392 0 1 1 1 491.96463 1473.87934 1473.87895 0.26 0.00013 0/0 0 0 13057000 HCD 30 MS2 50.79235 1301.5 108.86 61.5884 17902 17902 17897 QEplus033719.raw F4 1415.4 968.9 1367 1307.2 1332.8 1417.7 453 3.78 1 FALSE 2.26E-05 0.001055 0.657 -250 82779 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFAESQPK [K].kFAESQPk.[K] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 2 Q9D8N0 Elongation factor 1-gamma OS=Mus musculus OX=10090 GN=Eef1g PE=1 SV=3 Q8R1N8; Q9D8N0 Eef1g protein OS=Mus musculus OX=10090 GN=Eef1g PE=2 SV=1; Elongation factor 1-gamma OS=Mus musculus OX=10090 GN=Eef1g PE=1 SV=3 1 2 2 0.5519 0 1 1 1 811.49786 1621.98845 1621.98805 0.25 0.0002 0/0 0 0 9149978 HCD 30 MS2 0 531 110 61.5909 17903 17903 17897 QEplus033719.raw F4 574.6 380.8 533.9 474.8 590.3 631.6 326 2.7 1 FALSE 3.35E-05 0.001333 0.636 -250 82788 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEANNLQLK [K].hEANNLQLk.[E] N-Term(TMT6plex); K9(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 2 2 0.6182 0 1 1 1 762.94934 1524.89141 1524.88985 1.02 0.00078 0/0 0 0 8467532 HCD 30 MS2 33.71159 681.3 110 61.5935 17904 17904 17897 QEplus033719.raw F4 721 574.6 753.6 560 769.4 708.9 380 4.06 1 FALSE 1.14E-05 1.60E-06 1.199 -250 82795 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RILEDK [K].rILEDk.[E] N-Term(TMT6plex); K6(TMT6plex) 2 Q9CQ60 6-phosphogluconolactonase OS=Mus musculus OX=10090 GN=Pgls PE=1 SV=1 D3Z4X1; Q9CQ60 6-phosphogluconolactonase OS=Mus musculus OX=10090 GN=Pgls PE=1 SV=1; 6-phosphogluconolactonase OS=Mus musculus OX=10090 GN=Pgls PE=1 SV=1 1 3 3 0.2774 0 1 1 1 411.2645 1231.77893 1231.77744 1.21 0.0005 0/0 0 0 8429864 HCD 30 MS2 52.77058 846.9 110 61.5959 17905 17905 17897 QEplus033719.raw F4 998.9 594.3 794 719.4 995.6 979.1 388 2.74 1 FALSE 0.007759 0.127 -0.055 -250 82803 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLEAETGCK [K].qLEAETGck.[I] N-Term(TMT6plex); C8(Carbamidomethyl); K9(TMT6plex) 8 Q9QYS9-6; Q9QYS9 Isoform 6 of Protein quaking OS=Mus musculus OX=10090 GN=Qki;Protein quaking OS=Mus musculus OX=10090 GN=Qki PE=1 SV=1 Q9QYS9-6; Q9QYS9; Q9QYS9-2; Q9QYS9-5; Q9QYS9-8; Q9QYS9-4; Q9QYS9-7; Q9QYS9-3 Isoform 6 of Protein quaking OS=Mus musculus OX=10090 GN=Qki; Protein quaking OS=Mus musculus OX=10090 GN=Qki PE=1 SV=1; Isoform 2 of Protein quaking OS=Mus musculus OX=10090 GN=Qki; Isoform 5 of Protein quaking OS=Mus musculus OX=10090 GN=Qki; Isoform 8 of Protein quaking OS=Mus musculus OX=10090 GN=Qki; Isoform 4 of Protein quaking OS=Mus musculus OX=10090 GN=Qki; Isoform 7 of Protein quaking OS=Mus musculus OX=10090 GN=Qki; Isoform 3 of Protein quaking OS=Mus musculus OX=10090 GN=Qki 0 2 2 0.5015 0 1 1 1 747.40552 1493.80376 1493.8034 0.24 0.00018 0/0 0 0 8106074 HCD 30 MS2 0 528.4 110 61.5985 17906 17906 17897 QEplus033719.raw F4 576.4 480.6 593 425.9 591.2 503.1 363 3.41 2 FALSE 1.14E-05 5.03E-06 1.104 -250 82812 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLSDATTK [K].tLSDATTk.[F] N-Term(TMT6plex); K8(TMT6plex) 1 Q921M7 CYFIP-related Rac1 interactor B OS=Mus musculus OX=10090 GN=Cyrib PE=1 SV=1 Q921M7 CYFIP-related Rac1 interactor B OS=Mus musculus OX=10090 GN=Cyrib PE=1 SV=1 0 2 2 0.4723 0 1 1 1 647.88373 1294.76018 1294.76185 -1.29 -0.00084 0/0 0 0 6988109.5 HCD 30 MS2 26.15623 763.3 110 61.601 17907 17907 17897 QEplus033719.raw F4 786.7 597.7 768.6 769 882.5 775.6 326 3.07 1 FALSE 1.14E-05 0.0001488 0.824 -250 82871 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEVGAPGAPGGK [K].gEVGAPGAPGGk.[G] N-Term(TMT6plex); K12(TMT6plex) 8 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; A0A087WPS3; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen alpha-1(III) chain (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 2 2 0.679 0 1 1 1 727.92365 1454.84001 1454.83675 2.24 0.00163 0/0 0 0 7408455.5 HCD 30 MS2 0 505.5 110 61.6268 17917 17917 17908 QEplus033719.raw F4 443.8 536.7 606.2 340.7 450.5 655.3 354 3.52 1 FALSE 1.14E-05 4.84E-10 1.867 -250 82881 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAVTYTEHAK [R].dAVTYTEHAk.[R] N-Term(TMT6plex); K10(TMT6plex) 2 P62806 Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2 Q61667; P62806 Histone H4 (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2 0 3 3 0.5521 0 1 1 1 531.62842 1592.8707 1592.86844 1.42 0.00075 0/0 0 0 14428475 HCD 30 MS2 37.84171 1126.4 110 61.6367 17920 17920 17919 QEplus033719.raw F4 1139.6 1027.2 1213.3 945.6 1389.8 1042.7 391 4.51 1 FALSE 1.14E-05 8.04E-07 1.255 -250 82906 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDGCHAYLSK [K].tDGcHAYLSk.[N] N-Term(TMT6plex); C4(Carbamidomethyl); K10(TMT6plex) 5 Q3U0U5 Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1 Q3UNQ0; Q3TC53; P40124; Q3U0U5; Q3UVJ2 Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein 1 OS=Mus musculus OX=10090 GN=Cap1 PE=1 SV=4; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1 0 3 3 0.727 0 1 1 1 537.28595 1609.8433 1609.84085 1.52 0.00082 0/0 0 0 26915014 HCD 30 MS2 41.51164 955.1 47.138 61.646 17924 17924 17919 QEplus033719.raw F4 995.7 879 966.7 717.3 1360 811.7 299 3.92 1 FALSE 1.14E-05 8.62E-06 1.06 -250 82911 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADTEVSAAAARPK [K].aDTEVSAAAARPk.[T] N-Term(TMT6plex); K13(TMT6plex) 6 Q8K2H5 "Melanoma antigen, family D, 1 OS=Mus musculus OX=10090 GN=Maged1 PE=2 SV=1" Q91W72; Q8K2H5; Q3UIL5; Q9QYH6; Q571N9; Q3UXM3 "Maged1 protein OS=Mus musculus OX=10090 GN=Maged1 PE=2 SV=1; Melanoma antigen, family D, 1 OS=Mus musculus OX=10090 GN=Maged1 PE=2 SV=1; MAGE domain-containing protein OS=Mus musculus OX=10090 GN=Maged1 PE=2 SV=1; Melanoma-associated antigen D1 OS=Mus musculus OX=10090 GN=Maged1 PE=1 SV=1; MFLJ00163 protein (Fragment) OS=Mus musculus OX=10090 GN=Maged1 PE=2 SV=1; MAGE domain-containing protein OS=Mus musculus OX=10090 GN=Maged1 PE=2 SV=1" 0 3 3 0.6176 0 1 1 1 582.33978 1745.00479 1744.99577 5.17 0.00301 0/0 0 0 12922694 HCD 30 MS2 30.59606 924.3 88.048 61.6482 17925 17925 17919 QEplus033719.raw F4 923.6 670.8 1026.5 809.3 979.9 1135.7 456 4.21 1 FALSE 1.14E-05 4.72E-11 2.059 -250 82930 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FYQNNK [K].fYQNNk.[D] N-Term(TMT6plex); K6(TMT6plex) 3 Q99JX4 Eukaryotic translation initiation factor 3 subunit M OS=Mus musculus OX=10090 GN=Eif3m PE=1 SV=1 A2A702; Q99JX4; A2A701 Eukaryotic translation initiation factor 3 subunit M OS=Mus musculus OX=10090 GN=Eif3m PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit M OS=Mus musculus OX=10090 GN=Eif3m PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit M (Fragment) OS=Mus musculus OX=10090 GN=Eif3m PE=1 SV=1 0 2 2 0.4035 0 1 1 1 636.36139 1271.7155 1271.71484 0.52 0.00033 0/0 0 0 6840700 HCD 30 MS2 0 1084.4 110 61.6533 17927 17927 17919 QEplus033719.raw F4 1150.2 853.1 1129.9 882.4 1377.2 1113.6 337 2.28 1 FALSE 0.008799 0.1559 -0.094 -250 82938 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEQHSQQPQLSPATSGR [R].lEQHSQQPQLSPATSGR.[G] N-Term(TMT6plex) 6 Q921T2 Torsin-1A-interacting protein 1 OS=Mus musculus OX=10090 GN=Tor1aip1 PE=1 SV=3 J3QQ40; Q921T2; Q3UE61; Q921T2-2; Q921T2-3; D3YXF8 Torsin-1A-interacting protein 1 OS=Mus musculus OX=10090 GN=Tor1aip1 PE=1 SV=1; Torsin-1A-interacting protein 1 OS=Mus musculus OX=10090 GN=Tor1aip1 PE=1 SV=3; Torsin-1A-interacting protein 1 OS=Mus musculus OX=10090 GN=Tor1aip1 PE=1 SV=1; Isoform 2 of Torsin-1A-interacting protein 1 OS=Mus musculus OX=10090 GN=Tor1aip1; Isoform 3 of Torsin-1A-interacting protein 1 OS=Mus musculus OX=10090 GN=Tor1aip1; Torsin-1A-interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Tor1aip1 PE=1 SV=2 0 3 3 0.7786 0 1 1 1 698.37097 2093.09836 2093.0937 2.23 0.00156 0/0 0 0 2653478 HCD 30 MS2 0 145.8 110 61.6558 17928 17928 17919 QEplus033719.raw F4 132.9 128.6 165 126.9 163.9 157.5 372 6.55 1 FALSE 1.14E-05 2.30E-13 2.498 -250 82944 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSGGAGGLGSLR [R].tSGGAGGLGSLR.[CS] N-Term(TMT6plex) 3 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; Q9JJY2; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin (Fragment) OS=Mus musculus OX=10090 GN=des PE=4 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 2 2 0.487 0 1 1 1 631.35712 1261.70696 1261.70618 0.62 0.00039 0/0 0 0 48487068 HCD 30 MS2 1.89947 1030 40.004 61.6581 17929 17929 17919 QEplus033719.raw F4 1317 409.7 997.7 1405.5 541.7 1508.3 408 3.86 1 FALSE 1.14E-05 7.66E-11 2.019 -250 82965 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GFASIR [R].gFASIR.[T] N-Term(TMT6plex) 3 Q78IK4 MICOS complex subunit Mic27 OS=Mus musculus OX=10090 GN=Apool PE=1 SV=1 Q78IK4; B1AV14; Q9CZB4 MICOS complex subunit Mic27 OS=Mus musculus OX=10090 GN=Apool PE=1 SV=1; MICOS complex subunit OS=Mus musculus OX=10090 GN=Apool PE=1 SV=1; MICOS complex subunit OS=Mus musculus OX=10090 GN=Apool PE=2 SV=1 0 2 2 0.2525 0 1 1 1 440.26691 879.52654 879.52497 1.78 0.00078 0/0 0 0 18742898 HCD 30 MS2 4.574406 766.9 86.368 61.6724 17934 17934 17930 QEplus033719.raw F4 800.4 579.3 832.3 774.4 693.7 921.4 25 2.02 1 FALSE 0.006267 0.1017 0.002 -250 82983 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQETLSQAGQK [K].tQETLSQAGQk.[T] N-Term(TMT6plex); K11(TMT6plex) 8 A2AUD5 Tumor protein D54 OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1 F6VQ81; A2AUD5; Q9CZ22; V9GWU5; Q9CYZ2; Q8BKP1; Q3TAI4; Q3TUJ9 Tumor protein D54 (Fragment) OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1; Tumor protein D54 OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpd52l2 PE=2 SV=1; Tumor protein D54 (Fragment) OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=8; Tumor protein D54 OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1; Tumor protein D54 OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1; Tumor protein D54 OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1; Tumor protein D54 OS=Mus musculus OX=10090 GN=Tpd52l2 PE=1 SV=1 0 2 2 0.6702 0 1 1 1 824.96802 1648.92876 1648.92702 1.05 0.00087 0/0 0 0 7743121 HCD 30 MS2 0 415.3 110 61.6797 17937 17937 17930 QEplus033719.raw F4 437.7 351.8 449.2 358.6 440.7 453.6 434 4.7 1 FALSE 1.14E-05 1.30E-07 1.406 -250 82991 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELEDGGLER [R].eLEDGGLER.[K] N-Term(TMT6plex) 3 E9PWK1 Epoxide hydrolase OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=1 F6YTS6; E9PWK1; Q9D379 Epoxide hydrolase 1 (Fragment) OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=2; Epoxide hydrolase OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=1; Epoxide hydrolase 1 OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=2 0 2 2 0.4804 0 1 1 1 623.82715 1246.64702 1246.64766 -0.51 -0.00032 0/0 0 0 4651523 HCD 30 MS2 32.67324 634.5 110 61.6822 17938 17938 17930 QEplus033719.raw F4 598.6 587.6 710.7 530.1 651.8 728.4 223 3.31 1 FALSE 2.26E-05 0.001106 0.653 -250 83006 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHMGNCAENTAK [K].iHMGNcAENTAk.[K] N-Term(TMT6plex); C6(Carbamidomethyl); K12(TMT6plex) 2 Q3TQP7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Acat1 PE=2 SV=1 Q3TQP7; Q8QZT1 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Acat1 PE=2 SV=1; Acetyl-CoA acetyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Acat1 PE=1 SV=1" 0 3 3 0.7684 0 1 1 1 601.9801 1803.92575 1803.92459 0.64 0.00039 0/0 0 0 17616272 HCD 30 MS2 20.6844 679.4 77.46 61.6867 17940 17940 17930 QEplus033719.raw F4 712.3 539.8 748.9 688.9 624.4 762.2 237 6.26 1 FALSE 1.14E-05 1.71E-12 2.333 -250 83011 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVEEYK [K].eVEEYk.[N] N-Term(TMT6plex); K6(TMT6plex) 9 Q3TCR7; P39054 Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1;Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2 Q3TCR7; P39054; P39054-2; G3X9G4; F8WIV5; Q3T9X3; Q9CUM4; Q3TBU6; G3UZZ3 Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2; Isoform 2 of Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin GTPase (Fragment) OS=Mus musculus OX=10090 GN=Dnm2 PE=2 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=2 SV=1; Dynamin GTPase (Fragment) OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1 0 2 2 0.2026 0 1 1 1 627.85266 1254.69805 1254.69819 -0.11 -0.00007 0/0 0 0 17347050 HCD 30 MS2 45.9373 1382 110 61.694 17942 17942 17941 QEplus033719.raw F4 1421.8 1195 1501.9 1233.8 1552.1 1387.6 272 2.27 2 FALSE 0.003869 0.07279 0.08 -250 83038 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YADEMK [R].yADEMk.[E] N-Term(TMT6plex); K6(TMT6plex) 3 O35295 Transcriptional activator protein Pur-beta OS=Mus musculus OX=10090 GN=Purb PE=1 SV=3 Q3UTJ8; O35295; Q8BQK8 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Purb PE=2 SV=1; Transcriptional activator protein Pur-beta OS=Mus musculus OX=10090 GN=Purb PE=1 SV=3; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Purb PE=2 SV=1 0 2 2 0.5136 0 1 1 1 607.82874 1214.65019 1214.64913 0.88 0.00053 0/0 0 0 27913426 HCD 30 MS2 22.80056 1041.8 41.385 61.7033 17946 17946 17941 QEplus033719.raw F4 1090.4 720.7 1240.1 1027 924.5 1247.9 161 2.57 1 FALSE 0.003523 0.06782 0.093 -250 83043 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRVPYVK [K].nRVPYVk.[G] N-Term(TMT6plex); K7(TMT6plex) 9 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 Q61768; Q3TY51; P28738; Q8CFE7; E9QAK5; Q3UWI9; Q05CG8; Q6NSS5; Q8CHF1 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3; Kinesin-like protein OS=Mus musculus OX=10090 PE=2 SV=1; Kinesin heavy chain isoform 5C OS=Mus musculus OX=10090 GN=Kif5c PE=1 SV=3; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif5b PE=2 SV=1; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=1; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif5b PE=2 SV=1; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif5b PE=2 SV=1; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif5b PE=2 SV=1; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0531 PE=2 SV=1 1 3 3 0.3701 0 1 1 1 445.28412 1333.8378 1333.83563 1.63 0.00073 0/0 0 0 27145594 HCD 30 MS2 10.88598 715 42.735 61.7056 17947 17947 17941 QEplus033719.raw F4 784 510.3 805.4 668.9 652.1 869.5 260 2.54 1 FALSE 0.001359 0.01936 0.287 -250 83050 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AADEDELK [K].aADEDELk.[E] N-Term(TMT6plex); K8(TMT6plex) 6 E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" A0A087WS16; D3YWD1; J3QQ16; Q9Z0I9; O88493; E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen, type VI, alpha 3 (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen alpha3(VI) (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Type VI collagen alpha 3 subunit OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" 0 2 2 0.5449 0 1 1 1 674.87225 1348.73723 1348.73603 0.89 0.0006 0/0 0 0 18392900 HCD 30 MS2 11.76026 1124.9 110 61.7081 17948 17948 17941 QEplus033719.raw F4 1176.2 1116.3 996.8 906.7 1571 982.4 339 3.12 1 FALSE 1.14E-05 0.0001744 0.811 -250 83077 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIHGQFK [K].dIHGQFk.[M] N-Term(TMT6plex); K7(TMT6plex) 3 E9Q1S3 Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23a PE=1 SV=1 E9Q1S3; Q8C1E4; Q01405 Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23a PE=1 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23a PE=2 SV=1; Protein transport protein Sec23A OS=Mus musculus OX=10090 GN=Sec23a PE=1 SV=2 0 3 3 0.2696 0 1 1 1 434.92395 1302.7573 1302.75704 0.2 0.00009 0/0 0 0 11857747 HCD 30 MS2 65.22164 765 78.358 61.7154 17951 17951 17941 QEplus033719.raw F4 845.7 624.1 803.2 651.5 829.8 835.9 346 3.82 1 FALSE 1.14E-05 5.03E-06 1.104 -250 83082 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLKPAASK [R].nLkPAASk.[L] N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex) 1 P70271 PDZ and LIM domain protein 4 OS=Mus musculus OX=10090 GN=Pdlim4 PE=1 SV=3 P70271 PDZ and LIM domain protein 4 OS=Mus musculus OX=10090 GN=Pdlim4 PE=1 SV=3 0 3 3 0.5924 0 1 1 1 505.99908 1515.9827 1515.98257 0.08 0.00004 0/0 0 0 23013720 HCD 30 MS2 3.500329 1444.7 110 61.7227 17953 17953 17952 QEplus033719.raw F4 2108.1 963.9 1551.2 1394.9 1376.7 1273.2 166 2.38 1 FALSE 0.001456 0.02103 0.273 -250 83097 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSYVGDEAQSK [KR].dSYVGDEAQSk.[RT] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; Q8CF71; P63268; Q61274; V9GXQ2; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Predicted gene 17087 OS=Mus musculus OX=10090 GN=Gm17087 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 2 2 0.536 0 1 1 1 828.92822 1656.84917 1656.8481 0.64 0.00053 0/0 0 0 63259224 HCD 30 MS2 4.869015 759.8 33.298 61.7274 17955 17955 17952 QEplus033719.raw F4 800 680.4 846 656.7 836.9 739 229 4.72 4 FALSE 1.14E-05 7.72E-10 1.828 -250 83107 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNVTIK [K].gNVTIk.[EIL] N-Term(TMT6plex); K6(TMT6plex) 5 Q9CQW2; Q8VEH3 ADP-ribosylation factor-like protein 8B OS=Mus musculus OX=10090 GN=Arl8b PE=1 SV=1;ADP-ribosylation factor-like protein 8A OS=Mus musculus OX=10090 GN=Arl8a PE=1 SV=1 Q9CQW2; Q8VEH3; F6QKK2; A0A0N4SVB8; Q9DAB3 ADP-ribosylation factor-like protein 8B OS=Mus musculus OX=10090 GN=Arl8b PE=1 SV=1; ADP-ribosylation factor-like protein 8A OS=Mus musculus OX=10090 GN=Arl8a PE=1 SV=1; ADP-ribosylation factor-like protein 8A (Fragment) OS=Mus musculus OX=10090 GN=Arl8a PE=1 SV=1; ADP-ribosylation factor-like protein 8B OS=Mus musculus OX=10090 GN=Arl8b PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Arl8b PE=2 SV=1 0 2 2 0.3016 0 1 1 1 545.35626 1089.70525 1089.70322 1.86 0.00102 0/0 0 0 32151378 HCD 30 MS2 50.92721 1014.3 25.354 61.732 17957 17957 17952 QEplus033719.raw F4 1056.3 685.9 1043.7 1175.9 1013.5 1110.6 154 1.89 2 FALSE 0.005456 0.09254 0.027 -250 83108 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNVTLK [K].gNVTLk.[EIL] N-Term(TMT6plex); K6(TMT6plex) 3 Q99JZ4 GTP-binding protein SAR1a OS=Mus musculus OX=10090 GN=Sar1a PE=1 SV=1 Q3TXJ4; Q99JZ4; P36536 Uncharacterized protein OS=Mus musculus OX=10090 GN=Sar1a PE=2 SV=1; GTP-binding protein SAR1a OS=Mus musculus OX=10090 GN=Sar1a PE=1 SV=1; GTP-binding protein SAR1a OS=Mus musculus OX=10090 GN=Sar1a PE=1 SV=1 0 2 2 0.3016 0 1 2 2 545.35626 1089.70525 1089.70322 1.86 0.00102 0/0 0 0 32151378 HCD 30 MS2 50.92721 1014.3 25.354 61.732 17957 17957 17952 QEplus033719.raw F4 1056.3 685.9 1043.7 1175.9 1013.5 1110.6 154 1.89 1 FALSE 0.005456 0.09254 0.027 -250 83117 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AFEDEK [R].aFEDEk.[K] N-Term(TMT6plex); K6(TMT6plex) 4 Q3TGU7 Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=1 Q3TGU7; Q05BN2; P50580-2; Q3UMW2 Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=1; Pa2g4 protein (Fragment) OS=Mus musculus OX=10090 GN=Pa2g4 PE=2 SV=1; Isoform 2 of Proliferation-associated protein 2G4 OS=Mus musculus OX=10090 GN=Pa2g4; Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=2 SV=1 0 2 2 0.3095 0 1 1 1 598.83197 1196.65666 1196.65632 0.28 0.00017 0/0 0 0 31404226 HCD 30 MS2 27.59902 1636.3 67.051 61.7342 17958 17958 17952 QEplus033719.raw F4 1716.7 1340.2 1639.9 1409.9 1976.7 1734.2 235 2.1 1 FALSE 0.005324 0.09063 0.032 -250 83120 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSGGAGGLGSLR [R].tSGGAGGLGSLR.[CS] N-Term(TMT6plex) 3 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; Q9JJY2; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin (Fragment) OS=Mus musculus OX=10090 GN=des PE=4 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 3 3 0.6056 0 1 1 1 421.24045 1261.70679 1261.70618 0.48 0.0002 0/0 0 0 21471524 HCD 30 MS2 17.10096 329.6 56.711 61.7365 17959 17959 17952 QEplus033719.raw F4 360.6 235.4 338.7 315.7 340.3 387 408 3.93 1 FALSE 1.14E-05 5.37E-07 1.289 -250 83134 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLGPEAK [R].tLGPEAk.[S] N-Term(TMT6plex); K7(TMT6plex) 7 Q8BS26; Q3TY95 Uncharacterized protein OS=Mus musculus OX=10090 GN=Akt1 PE=2 SV=1;Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1 D3Z783; F8WHG5; Q8CE74; Q8BS26; P31750; A4FUQ9; Q3TY95 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Akt1 PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Akt2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Akt1 PE=2 SV=1; RAC-alpha serine/threonine-protein kinase OS=Mus musculus OX=10090 GN=Akt1 PE=1 SV=2; Akt1 protein (Fragment) OS=Mus musculus OX=10090 GN=Akt1 PE=2 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Akt2 PE=1 SV=1 0 2 2 0.417 0 1 1 1 587.36591 1173.72453 1173.72434 0.16 0.0001 0/0 0 0 13568043 HCD 30 MS2 26.23882 1217.8 110 61.7435 17962 17962 17952 QEplus033719.raw F4 1315.1 806.9 1289.4 1084.3 1205.5 1605.5 435 2.23 2 FALSE 0.005481 0.09284 0.026 -250 83143 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVADYVR [K].aVADYVR.[N] N-Term(TMT6plex) 1 Q6A0A9 Constitutive coactivator of PPAR-gamma-like protein 1 OS=Mus musculus OX=10090 GN=FAM120A PE=1 SV=2 Q6A0A9 Constitutive coactivator of PPAR-gamma-like protein 1 OS=Mus musculus OX=10090 GN=FAM120A PE=1 SV=2 0 2 2 0.3158 0 1 1 1 511.79636 1022.58544 1022.58321 2.18 0.00111 0/0 0 0 11085797 HCD 30 MS2 26.66212 1295.2 110 61.7508 17964 17964 17963 QEplus033719.raw F4 1297.2 1114.3 1405.2 1199.3 1460.1 1294.8 235 2.09 1 FALSE 0.0003996 0.00717 0.455 -250 83152 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDVDIRK [K].cDVDIRk.[D] N-Term(TMT6plex); C1(Carbamidomethyl); K7(TMT6plex) 23 O89054; Q3UAF6 Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q8BFZ3; Q3UCF8; Q3TSB7; Q9QZ83; O89054; Q3UAF6; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; F8WGM8; Q99NC5; Q3TIJ9; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P63260; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 1 2 2 0.6038 0 1 1 1 682.39221 1363.77715 1363.77679 0.26 0.00018 0/0 0 0 17583406 HCD 30 MS2 10.75958 775.2 110 61.7533 17965 17965 17963 QEplus033719.raw F4 927.1 704.7 779.7 631.5 805.1 803.2 482 2.12 2 FALSE 0.001456 0.02098 0.273 -250 83161 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNNFQKPK [K].sNNFQkPk.[V] N-Term(TMT6plex); K6(TMT6plex); K8(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 0 3 3 0.4359 0 1 1 1 550.6698 1649.99485 1649.9942 0.39 0.00021 0/0 0 0 59784336 HCD 30 MS2 37.0444 1032.7 17.091 61.7556 17966 17966 17963 QEplus033719.raw F4 1279.6 295.1 765.8 2090.5 435 1330.2 399 2.34 1 FALSE 0.001567 0.02381 0.252 -250 83176 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQISEQLR [K].eQISEQLR.[V] N-Term(TMT6plex) 16 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 F6XCT0; Q9QXZ0-3; B1ARU4; F6SHS0; E9QA63; E9QNP1; Q5DTZ2; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8 Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; MKIAA1251 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 2 2 0.3446 0 1 1 1 616.34528 1231.68328 1231.68438 -0.9 -0.00055 0/0 0 0 7652242.5 HCD 30 MS2 25.64021 747.2 110 61.7603 17968 17968 17963 QEplus033719.raw F4 779.1 441.2 876.8 738.3 638.5 1009.1 332 2.67 3 FALSE 5.44E-05 0.001732 0.612 -250 83188 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDGCHAYLSK [K].tDGcHAYLSk.[N] N-Term(TMT6plex); C4(Carbamidomethyl); K10(TMT6plex) 5 Q3U0U5 Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1 Q3UNQ0; Q3TC53; P40124; Q3U0U5; Q3UVJ2 Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein 1 OS=Mus musculus OX=10090 GN=Cap1 PE=1 SV=4; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1 0 2 2 0.7059 0 1 1 1 805.42517 1609.84307 1609.84085 1.38 0.00111 0/0 0 0 3837020 HCD 30 MS2 0 352.6 110 61.7654 17970 17970 17963 QEplus033719.raw F4 335.7 353.8 358.1 266 545.2 256.8 303 4.25 1 FALSE 1.14E-05 1.05E-08 1.613 -250 83193 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIYGEK [RK].sIYGEk.[F] N-Term(TMT6plex); K6(TMT6plex) 5 Q3UAJ1 Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1 Q3TE63; Q3UAJ1; Q5SVY2; Q9CZK9; A0A1L1SST0 Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1 0 2 2 0.3008 0 1 1 1 577.84235 1154.67742 1154.68215 -4.1 -0.00236 0/0 0 0 10641569 HCD 30 MS2 51.84048 1736.2 110 61.7679 17971 17971 17963 QEplus033719.raw F4 1932.6 1344.9 1856.6 1479.7 1916.8 1886.5 175 2.36 1 FALSE 0.003252 0.06332 0.105 -250 83203 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYFECQAK [K].rYFEcQAk.[Y] N-Term(TMT6plex); C5(Carbamidomethyl); K8(TMT6plex) 1 Q9D1E6 Tubulin-folding cofactor B OS=Mus musculus OX=10090 GN=Tbcb PE=1 SV=2 Q9D1E6 Tubulin-folding cofactor B OS=Mus musculus OX=10090 GN=Tbcb PE=1 SV=2 1 3 3 0.4 0 1 1 1 520.61884 1559.84195 1559.84045 0.96 0.0005 0/0 0 0 10316337 HCD 30 MS2 36.36332 1026.6 110 61.7704 17972 17972 17963 QEplus033719.raw F4 1011.3 864.3 1079.2 859.8 1243.7 1101.6 325 3.4 1 FALSE 1.14E-05 0.0003821 0.745 -250 83219 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVVADTR [K].lVVADTR.[G] N-Term(TMT6plex) 4 A0A1S6GWH5 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1 P31254; Q61341; A0A1S6GWH5; Q02053 Ubiquitin-like modifier-activating enzyme 1 Y OS=Mus musculus OX=10090 GN=Uba1y PE=1 SV=2; Ubiquitin-activating enzyme (Fragment) OS=Mus musculus OX=10090 GN=Ube1y PE=3 SV=2; Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1; Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus OX=10090 GN=Uba1 PE=1 SV=1 0 2 2 0.304 0 1 1 1 501.81104 1002.61479 1002.61451 0.28 0.00014 0/0 0 0 85059320 HCD 30 MS2 30.58809 720.9 10.098 61.7802 17975 17975 17974 QEplus033719.raw F4 746.8 600.9 808.9 583.6 860 725 132 2.5 1 FALSE 0.0005556 0.008377 0.432 -250 83229 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTSAGTGGMWR [R].tTSAGTGGMWR.[F] N-Term(TMT6plex) 3 E9PW43 Predicted pseudogene 10320 OS=Mus musculus OX=10090 GN=Gm10320 PE=3 SV=1 Q9WUG7; E9PW43; Q9CQS8 ARL-6 interacting protein-3 (Fragment) OS=Mus musculus OX=10090 GN=Arl6ip3 PE=2 SV=1; Predicted pseudogene 10320 OS=Mus musculus OX=10090 GN=Gm10320 PE=3 SV=1; Protein transport protein Sec61 subunit beta OS=Mus musculus OX=10090 GN=Sec61b PE=1 SV=3 0 2 2 0.7625 0 1 1 1 677.3432 1353.67912 1353.67825 0.65 0.00044 0/0 0 0 35500668 HCD 30 MS2 12.04878 633.5 51.401 61.785 17977 17977 17974 QEplus033719.raw F4 643.9 596.9 676.3 483.1 810.9 590.1 148 4 1 FALSE 1.14E-05 5.13E-08 1.482 -250 83251 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FAANPNQNK [K].fAANPNQNk.[N] N-Term(TMT6plex); K9(TMT6plex) 7 Q8BM84 ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1 Q3TT05; Q3UFF9; Q8BTQ1; Q8BM84; P70372; Q8BVF8; Q8BW03 ELAV-like protein (Fragment) OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein (Fragment) OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein 1 OS=Mus musculus OX=10090 GN=Elavl1 PE=1 SV=2; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1 0 2 2 0.6618 0 1 1 1 731.414 1461.82073 1461.82143 -0.48 -0.00035 0/0 0 0 10661294 HCD 30 MS2 24.60449 1069.4 110 61.7921 17980 17980 17974 QEplus033719.raw F4 1098.5 1004.3 1161.8 729 1348 1074.6 396 3.4 1 FALSE 1.14E-05 0.0005005 0.722 -250 83289 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQLGEDIR [K].aQLGEDIR.[R] N-Term(TMT6plex) 6 Q9Z1A1 TFG protein OS=Mus musculus OX=10090 GN=Tfg PE=1 SV=1 Q9Z1A1; B8JJG7; B8JJG8; Q9D828; Q8C2C6; B8JJG9 TFG protein OS=Mus musculus OX=10090 GN=Tfg PE=1 SV=1; Trk-fused gene (Fragment) OS=Mus musculus OX=10090 GN=Tfg PE=1 SV=1; Trk-fused gene (Fragment) OS=Mus musculus OX=10090 GN=Tfg PE=1 SV=1; PB1 domain-containing protein OS=Mus musculus OX=10090 GN=Tfg PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tfg PE=2 SV=1; Trk-fused gene (Fragment) OS=Mus musculus OX=10090 GN=Tfg PE=1 SV=1 0 2 2 0.3096 0 1 1 1 565.8208 1130.63432 1130.6367 -2.1 -0.00119 0/0 0 0 13001740 HCD 30 MS2 36.13931 1076.6 72.495 61.8089 17986 17986 17985 QEplus033719.raw F4 1016.9 929.2 1318.3 907 1007.4 1281 252 1.97 1 FALSE 0.0005944 0.008806 0.425 -250 83298 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQAEEAEEQSNANLAK [K].rQAEEAEEQSNANLAk.[F] N-Term(TMT6plex); K16(TMT6plex) 2 P13542 Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 3 3 0.7242 0 1 1 1 749.39819 2246.18003 2246.17771 1.03 0.00077 0/0 0 0 6196915 HCD 30 MS2 0 157.1 110 61.8114 17987 17987 17985 QEplus033719.raw F4 163.8 46.8 116.6 285.8 66.2 263.2 360 6.89 1 FALSE 1.14E-05 6.31E-16 3.445 -250 83330 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MSCMDNK [K].mScMDNk.[D] N-Term(TMT6plex); C3(Carbamidomethyl); K7(TMT6plex) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.7832 0 1 1 1 672.33069 1343.6541 1343.65218 1.43 0.00096 0/0 0 0 8532794 HCD 30 MS2 15.4316 1000.2 110 61.8212 17991 17991 17985 QEplus033719.raw F4 1024.1 1109 993.7 581.4 1559.3 733.7 81 3.09 1 FALSE 0.0006383 0.009865 0.407 -250 83347 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLEGEESR [KR].lLEGEESR.[LI] N-Term(TMT6plex) 24 Q3TWV0; Q3V2C6; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 Q3KNV1; A0A0A6YWC8; Q9NSB2; Q3TWV0; P15331; Q3V2C6; Q3U6S1; Q3UD36; P15331-2; Q6ISB0; P11679; Q9H552; G5E846; Q3UAX1; P08729; Q3V2S4; Q9DCV7; P15331-3; P31001; G3X981; Q3TFD9; P05787; A0A2R8W6R6; Q5FWJ3 "TREMBL:Q3KNV1;Q96GE1 Tax_Id=9606 Gene_Symbol=KRT7 keratin 7; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; SWISS-PROT:Q9NSB2 Keratin, type II cuticular Hb4 (Hair keratin, type II Hb4) - Homo sapiens (Human).; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Peripherin OS=Mus musculus OX=10090 GN=Prph PE=1 SV=2; IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Isoform 3u of Peripherin OS=Mus musculus OX=10090 GN=Prph; TREMBL:Q6ISB0 Keratin, hair, basic, 4 - Homo sapiens (Human).; Keratin, type II cytoskeletal 8 OS=Mus musculus OX=10090 GN=Krt8 PE=1 SV=4; TREMBL:Q9H552 Tax_Id=9606 Gene_Symbol=- Keratin-8-like protein 1; Peripherin OS=Mus musculus OX=10090 GN=Prph PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:P08729 Tax_Id=9606 Gene_Symbol=KRT7 Keratin, type II cytoskeletal 7; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:Q9DCV7 Tax_Id=10090 Gene_Symbol=Krt7 Keratin, type II cytoskeletal 7; Isoform 5b of Peripherin OS=Mus musculus OX=10090 GN=Prph; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3; Peripherin OS=Mus musculus OX=10090 GN=Prph PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:P05787 Tax_Id=9606 Gene_Symbol=KRT8 Keratin, type II cytoskeletal 8; Peripherin OS=Mus musculus OX=10090 GN=Prph PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1" 0 2 2 0.2521 0 1 1 1 581.31757 1161.62786 1161.63128 -2.95 -0.00171 0/0 0 0 3531038.75 HCD 30 MS2 33.48648 1082.4 110 61.8262 17993 17993 17985 QEplus033719.raw F4 1238.6 861.1 1173 815 1241.5 1165.4 229 2.34 3 TRUE 0.0003211 0.006299 0.472 -250 83354 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGDSSAEELK [K].kGDSSAEELk.[L] N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex) 2 P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 Q5RKP3; P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=2 SV=1; 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 1 3 3 0.5539 0 1 1 1 584.34344 1751.01578 1751.01539 0.22 0.00013 0/0 0 0 28756548 HCD 30 MS2 14.50803 1044.3 51.844 61.8284 17994 17994 17985 QEplus033719.raw F4 1174.8 868.9 1080 893.6 1197.9 1050.5 405 3.43 1 FALSE 1.14E-05 7.92E-09 1.636 -250 83372 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EALTEEK [K].eALTEEk.[C] N-Term(TMT6plex); K7(TMT6plex) 2 A0A1S6GWH5 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1 A0A1S6GWH5; Q02053 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1; Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus OX=10090 GN=Uba1 PE=1 SV=1 0 2 2 0.3925 0 1 1 1 639.37421 1277.74114 1277.7353 4.57 0.00292 0/0 0 0 12763977 HCD 30 MS2 29.33597 1269 84.523 61.8403 17998 17998 17996 QEplus033719.raw F4 1422.9 1090.9 1324.3 994.7 1487.5 1293.4 462 2.65 1 FALSE 0.0004793 0.007603 0.446 -250 83379 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSYVGDEAQSK [KR].dSYVGDEAQSk.[RT] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; Q8CF71; P63268; Q61274; V9GXQ2; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Predicted gene 17087 OS=Mus musculus OX=10090 GN=Gm17087 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 3 3 0.7005 0 1 1 1 552.95465 1656.8494 1656.8481 0.78 0.00043 0/0 0 0 277589216 HCD 30 MS2 5.146999 556.4 5.788 61.8425 17999 17999 17996 QEplus033719.raw F4 623 488.3 617.2 473.1 586.5 550.5 231 4.14 4 FALSE 1.14E-05 1.48E-08 1.585 -250 83399 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQLGEDIR [K].aQLGEDIR.[R] N-Term(TMT6plex) 6 Q9Z1A1 TFG protein OS=Mus musculus OX=10090 GN=Tfg PE=1 SV=1 Q9Z1A1; B8JJG7; B8JJG8; Q9D828; Q8C2C6; B8JJG9 TFG protein OS=Mus musculus OX=10090 GN=Tfg PE=1 SV=1; Trk-fused gene (Fragment) OS=Mus musculus OX=10090 GN=Tfg PE=1 SV=1; Trk-fused gene (Fragment) OS=Mus musculus OX=10090 GN=Tfg PE=1 SV=1; PB1 domain-containing protein OS=Mus musculus OX=10090 GN=Tfg PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tfg PE=2 SV=1; Trk-fused gene (Fragment) OS=Mus musculus OX=10090 GN=Tfg PE=1 SV=1 0 2 2 0.2705 0 1 1 1 565.82251 1130.63774 1130.6367 0.92 0.00052 0/0 0 0 18428840 HCD 30 MS2 20.71495 747.1 36.362 61.8471 18001 18001 17996 QEplus033719.raw F4 726.9 628.8 899.7 655.4 708.7 863.2 363 2.44 1 FALSE 7.59E-05 0.002842 0.564 -250 83409 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVHMPK [K].dVHMPk.[H] N-Term(TMT6plex); K6(TMT6plex) 6 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" A0A338P731; P63325; Q3UW83; A0A338P7K4; Q3U9P0; A0A3B2W864 "40S ribosomal protein S10 (Fragment) OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; S10_plectin domain-containing protein OS=Mus musculus OX=10090 GN=Rps10 PE=2 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 0 2 2 0.5292 0 1 1 1 592.84735 1184.68743 1184.68619 1.05 0.00062 0/0 0 0 7043583 HCD 30 MS2 34.63829 937.7 110 61.8496 18002 18002 17996 QEplus033719.raw F4 996.3 666.2 981.5 729.7 1147.7 1104.8 195 2.4 2 FALSE 0.005733 0.09602 0.018 -250 83419 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTEEGSPK [K].lTEEGSPk.[G] N-Term(TMT6plex); K8(TMT6plex) 6 J3QJX3 Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=1 Q80YC0; J3QJX3; Q5DTL8; Q9Z2G6; Q3TT70; Q6GTY4 Sel1l protein (Fragment) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1; Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=1; MKIAA4137 protein (Fragment) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1; Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=2; Fibronectin type-II domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1; Sel-1 suppressor of lin-12-like (C. elegans) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1 0 2 2 0.1462 0 1 1 1 659.88379 1318.7603 1318.76185 -1.18 -0.00078 0/0 0 0 6808899.5 HCD 30 MS2 21.00007 677.7 110 61.8521 18003 18003 17996 QEplus033719.raw F4 689.4 481.1 691.3 634.8 730.8 839 441 1.71 1 FALSE 0.0001707 0.003872 0.531 -250 83429 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GWDESK [K].gWDESk.[M] N-Term(TMT6plex); K6(TMT6plex) 6 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; F6RDH3; Q62412; A0A571BF46; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=1 SV=8; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 2 2 0.2967 0 1 1 1 590.32532 1179.64336 1179.64101 1.99 0.00117 0/0 0 0 5832167.5 HCD 30 MS2 0 919.2 110 61.8546 18004 18004 17996 QEplus033719.raw F4 992.3 416.5 864.4 1297.6 559.6 1385 231 2.09 1 FALSE 0.005366 0.09158 0.03 -250 83453 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTEEGSPK [K].lTEEGSPk.[G] N-Term(TMT6plex); K8(TMT6plex) 6 J3QJX3 Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=1 Q80YC0; J3QJX3; Q5DTL8; Q9Z2G6; Q3TT70; Q6GTY4 Sel1l protein (Fragment) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1; Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=1; MKIAA4137 protein (Fragment) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1; Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=2; Fibronectin type-II domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1; Sel-1 suppressor of lin-12-like (C. elegans) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1 0 3 3 0.2941 0 1 1 1 440.26053 1318.76703 1318.76185 3.93 0.00173 0/0 0 0 5918950 HCD 30 MS2 63.2435 771.3 110 61.8669 18008 18008 18007 QEplus033719.raw F4 847.7 587.8 822.9 613.2 815 941.4 462 1.7 1 FALSE 0.004222 0.07729 0.069 -250 83467 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VALAEACR [R].vALAEAcR.[K] N-Term(TMT6plex); C7(Carbamidomethyl) 9 Q3TW28 Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2 PE=2 SV=1 Q64514; Q3V451; Q3V3M8; Q64514-2; Q3TW28; Q3U4M7; A0A087WRC0; Q3TB11; Q05DJ9 Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2 PE=1 SV=3; Peptidase_S8 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Peptidase_S8 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Isoform Short of Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2; Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2 PE=2 SV=1; Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2 PE=2 SV=1; Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2 PE=1 SV=1; Tripeptidyl-peptidase 2 (Fragment) OS=Mus musculus OX=10090 GN=Tpp2 PE=2 SV=1; Tpp2 protein OS=Mus musculus OX=10090 GN=Tpp2 PE=1 SV=1 0 2 2 0.5802 0 1 1 1 559.81342 1118.61955 1118.61894 0.55 0.0003 0/0 0 0 18244610 HCD 30 MS2 34.00863 889 110 61.872 18010 18010 18007 QEplus033719.raw F4 811 732.9 972 747.3 1062.5 1008.3 334 2.62 1 FALSE 0.0003996 0.007082 0.456 -250 83476 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FAANPNQNK [K].fAANPNQNk.[N] N-Term(TMT6plex); K9(TMT6plex) 7 Q8BM84 ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1 Q3TT05; Q3UFF9; Q8BTQ1; Q8BM84; P70372; Q8BVF8; Q8BW03 ELAV-like protein (Fragment) OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein (Fragment) OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein 1 OS=Mus musculus OX=10090 GN=Elavl1 PE=1 SV=2; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1 0 3 3 0.5 0 1 1 1 487.94543 1461.82175 1461.82143 0.22 0.00011 0/0 0 0 16202299 HCD 30 MS2 39.46587 1421.9 63.615 61.8742 18011 18011 18007 QEplus033719.raw F4 2444.4 823.1 1456.4 1362.1 953.3 1492.2 409 2.54 1 FALSE 0.002586 0.05085 0.14 -250 83482 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IIHEDGYSEEECR [K].iIHEDGYSEEEcR.[Q] N-Term(TMT6plex); C12(Carbamidomethyl) 2 P08752 Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Mus musculus OX=10090 GN=Gnai2 PE=1 SV=5 A0A0A6YWA9; P08752 Guanine nucleotide-binding protein G(i) subunit alpha-2 (Fragment) OS=Mus musculus OX=10090 GN=Gnai2 PE=1 SV=1; Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Mus musculus OX=10090 GN=Gnai2 PE=1 SV=5 0 3 3 0.9073 0 1 1 1 622.62323 1865.85514 1865.85371 0.77 0.00048 0/0 0 0 11264843 HCD 30 MS2 11.77259 318.8 110 61.8768 18012 18012 18007 QEplus033719.raw F4 327.2 271.7 316.1 333.8 353 311.1 54 5.72 1 FALSE 1.14E-05 6.36E-12 2.224 -250 83486 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDSDGIR [R].iDSDGIR.[A] N-Term(TMT6plex) 1 Q05DS8 Centrosomal protein of 162 kDa (Fragment) OS=Mus musculus OX=10090 GN=4922501C03Rik PE=2 SV=1 Q05DS8 Centrosomal protein of 162 kDa (Fragment) OS=Mus musculus OX=10090 GN=4922501C03Rik PE=2 SV=1 0 2 2 0.0538 0 1 1 1 502.78299 1004.5587 1004.55739 1.31 0.00066 0/0 0 0 11076255 HCD 30 MS2 71.22803 814.5 31.49 61.879 18013 18013 18007 QEplus033719.raw F4 835.3 596 923.1 742.8 856.2 933.5 282 1.86 1 FALSE 0.002056 0.03741 0.184 -250 83494 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNQELQEINR [R].tNQELQEINR.[V] N-Term(TMT6plex) 6 Q542G9 Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1 B0V2N8; Q9CZI7; B0V2N5; B0V2N7; Q99KH3; Q542G9 Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1 0 2 2 0.6615 0 1 1 1 737.3985 1473.78972 1473.78589 2.6 0.00192 0/0 0 0 7471311.5 HCD 30 MS2 0 465.6 110 61.8815 18014 18014 18007 QEplus033719.raw F4 468.1 444.8 538.7 354.9 576.1 410.9 305 3.87 1 FALSE 1.14E-05 3.10E-07 1.334 -250 83508 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLPGGTCK [R].gLPGGTck.[G] N-Term(TMT6plex); C7(Carbamidomethyl); K8(TMT6plex) 5 Q91VN4 MICOS complex subunit Mic25 OS=Mus musculus OX=10090 GN=Chchd6 PE=1 SV=2 Q91VN4; E9Q4M4; Q9DA45; Q8C2Z6; Q3TJS8 MICOS complex subunit Mic25 OS=Mus musculus OX=10090 GN=Chchd6 PE=1 SV=2; MICOS complex subunit Mic25 OS=Mus musculus OX=10090 GN=Chchd6 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Chchd6 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Chchd6 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Chchd6 PE=2 SV=1 0 2 2 0.1438 0 1 1 1 624.3609 1247.71453 1247.71821 -2.96 -0.00184 0/0 0 0 5455062.5 HCD 30 MS2 57.83921 681.4 110 61.8865 18016 18016 18007 QEplus033719.raw F4 635.1 616.5 785.5 606.3 673.2 772.1 410 1.6 1 FALSE 0.008958 0.1603 -0.098 -250 83517 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEGVNSKEDEELR [K].aEGVNSkEDEELR.[Q] N-Term(TMT6plex); K7(TMT6plex) 2 Q8CHW4 Translation initiation factor eIF-2B subunit epsilon OS=Mus musculus OX=10090 GN=Eif2b5 PE=1 SV=1 A0A338P6D9; Q8CHW4 Translation initiation factor eIF-2B subunit epsilon (Fragment) OS=Mus musculus OX=10090 GN=Eif2b5 PE=1 SV=1; Translation initiation factor eIF-2B subunit epsilon OS=Mus musculus OX=10090 GN=Eif2b5 PE=1 SV=1 1 3 3 0.476 0 1 1 1 645.34137 1934.00956 1934.02311 -7.01 -0.00452 0/0 0 0 5136023 HCD 30 MS2 49.1721 503.1 110 61.8891 18017 18017 18007 QEplus033719.raw F4 510.1 411 552.3 484.3 512.6 548.5 318 2.71 1 FALSE 1.14E-05 2.52E-05 0.971 -250 83539 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQNGEFMTHK [K].aQNGEFMTHk.[L] N-Term(TMT6plex); K10(TMT6plex) 13 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; F6RGN9; Q3UGC3; E9QA15; F6ZAW1; E9Q0M9; D3Z6I7; S4R1T7; E9Q9F3; Q8VD79; F6T2Z7; E9QA16; F6QLP8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; H-caldesmon (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 0 3 3 0.6933 0 1 1 1 540.95752 1620.85801 1620.85683 0.72 0.00039 0/0 0 0 32626374 HCD 30 MS2 56.31686 1077.4 26.976 61.9011 18021 18021 18018 QEplus033719.raw F4 1047.9 902.2 1187.3 842.7 1254.4 1229.7 347 3.88 1 FALSE 1.14E-05 2.86E-07 1.341 -250 83562 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EKEELMER [R].ekEELMER.[L] N-Term(TMT6plex); K2(TMT6plex) 6 P26043 Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3 P26043; Q3TH46; Q3U111; A0A5F8MPB9; Q7TSG6; Q3UJJ8 Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=1; Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1 1 3 3 0.2217 0 1 1 1 507.94965 1521.83438 1521.8347 -0.21 -0.00011 0/0 0 0 13072993 HCD 30 MS2 40.60705 1345.2 89.31 61.9079 18024 18024 18018 QEplus033719.raw F4 1512.4 1107.4 1475.1 1191.1 1541.2 1243.9 435 2.3 1 FALSE 0.00079 0.01096 0.389 -250 83570 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAQGAMYR [K].iAQGAMYR.[G] N-Term(TMT6plex) 8 P14824; Q99JX6 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3;Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 Q3V2Z4; P14824; F8WIT2; Q3UI56; Q3TUI1; Q8CEX0; Q99JX6; Q3UDK4 Annexin OS=Mus musculus OX=10090 PE=2 SV=1; Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 0 2 2 0.5664 0 1 1 1 569.81311 1138.61894 1138.62403 -4.47 -0.00254 0/0 0 0 10316070 HCD 30 MS2 31.01468 1337.6 110 61.9104 18025 18025 18018 QEplus033719.raw F4 1404.6 1054.5 1429.4 1161.5 1592.5 1383.2 195 2.26 2 FALSE 0.0003312 0.006387 0.47 -250 83579 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVEAAQGVK [K].eVEAAQGVk.[I] N-Term(TMT6plex); K9(TMT6plex) 4 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 Q8BYY7; Q7TPC0; Q05D44; Q6A002 Eukaryotic translation initiation factor 5B (Fragment) OS=Mus musculus OX=10090 GN=Eif5b PE=2 SV=1; Eif5b protein OS=Mus musculus OX=10090 GN=Eif5b PE=2 SV=1; Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2; MKIAA0741 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif5b PE=2 SV=1 0 2 2 0.5994 0 1 1 1 694.91101 1388.81474 1388.81495 -0.15 -0.0001 0/0 0 0 7014033 HCD 30 MS2 42.87468 861.7 110 61.9129 18026 18026 18018 QEplus033719.raw F4 865.2 709.9 936.3 794.9 894.6 969 495 3.37 1 FALSE 1.14E-05 1.13E-06 1.227 -250 83585 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAEEQLR [K].lAEEQLR.[I] N-Term(TMT6plex) 1 Q3UL36 Arginine and glutamate-rich protein 1 OS=Mus musculus OX=10090 GN=Arglu1 PE=1 SV=2 Q3UL36 Arginine and glutamate-rich protein 1 OS=Mus musculus OX=10090 GN=Arglu1 PE=1 SV=2 0 2 2 0.2311 0 1 1 1 544.3194 1087.63152 1087.63089 0.58 0.00031 0/0 0 0 16780446 HCD 30 MS2 23.20382 1066.3 89.447 61.9152 18027 18027 18018 QEplus033719.raw F4 1063.3 1014.4 1139.3 859.3 1296.8 1024.7 278 2.38 1 FALSE 0.003616 0.06939 0.089 -250 83597 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPQFQK [R].nPQFQk.[L] N-Term(TMT6plex); K6(TMT6plex) 5 P06745 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4 B2RXT5; P06745; A0A0U1RQ72; A0A0U1RP97; B7ZWL9 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4; Glucose-6-phosphate isomerase 1 OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase 1 (Fragment) OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1 0 2 2 0.3099 0 1 1 1 610.36304 1219.7188 1219.71993 -0.93 -0.00057 0/0 0 0 15155592 HCD 30 MS2 0 1154.1 110 61.9248 18030 18030 18029 QEplus033719.raw F4 1204.1 792.8 1187.9 1197.3 1152.4 1390.3 461 2.42 1 FALSE 0.003575 0.06831 0.092 -250 83611 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEPVQSEPVK [K].gEPVQSEPVk.[M] N-Term(TMT6plex); K10(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.6601 0 1 1 1 764.44513 1527.88298 1527.87828 3.08 0.00235 0/0 0 0 7654125.5 HCD 30 MS2 0 432.1 110 61.9298 18032 18032 18029 QEplus033719.raw F4 483.4 162 338.7 727.1 229.6 651.6 364 3.53 2 FALSE 1.14E-05 3.27E-08 1.519 -250 83617 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVDEYCK [R].eVDEYck.[I] N-Term(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex) 1 Q64442 Sorbitol dehydrogenase OS=Mus musculus OX=10090 GN=Sord PE=1 SV=3 Q64442 Sorbitol dehydrogenase OS=Mus musculus OX=10090 GN=Sord PE=1 SV=3 0 2 2 0.5813 0 1 1 1 700.85968 1400.71208 1400.71319 -0.79 -0.00055 0/0 0 0 6972406 HCD 30 MS2 22.27232 643.3 110 61.9323 18033 18033 18029 QEplus033719.raw F4 704.2 516.8 658.7 479.8 796 704.3 155 2.89 1 FALSE 0.0005076 0.00803 0.438 -250 83622 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDTDDEIAK [K].dDTDDEIAk.[Y] N-Term(TMT6plex); K9(TMT6plex) 2 Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 Q3TXE5; Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 0 2 2 0.7353 0 1 1 1 740.38257 1479.75786 1479.75789 -0.02 -0.00001 0/0 0 0 4404177.5 HCD 30 MS2 0 326.7 110 61.9348 18034 18034 18029 QEplus033719.raw F4 328.4 246.3 350 254.6 399.6 381.1 213 3.4 1 FALSE 1.14E-05 1.53E-06 1.202 -250 83629 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAHMESSLGQAR [R].vAHMESSLGQAR.[E] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.6791 0 1 1 1 757.89764 1514.78801 1514.79468 -4.4 -0.00333 0/0 0 0 2926311 HCD 30 MS2 0 185.2 110 61.9374 18035 18035 18029 QEplus033719.raw F4 229.8 141.9 193.5 205.5 183 157.3 211 4.02 1 FALSE 1.14E-05 3.88E-08 1.505 -250 83635 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAHMESSLGQAR [R].vAHMESSLGQAR.[E] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 3 3 0.7119 0 1 1 1 505.60336 1514.79554 1514.79468 0.57 0.00029 0/0 0 0 19313546 HCD 30 MS2 26.03787 757.2 100.179 61.9419 18037 18037 18029 QEplus033719.raw F4 887.2 527.3 828.4 747.1 830.6 722.8 243 4.2 1 FALSE 1.14E-05 3.72E-11 2.079 -250 83655 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHVDEFK [K].aHVDEFk.[S] N-Term(TMT6plex); K7(TMT6plex) 3 Q91ZJ5 UTP--glucose-1-phosphate uridylyltransferase OS=Mus musculus OX=10090 GN=Ugp2 PE=1 SV=3 Q3U548; Q8R0M2; Q91ZJ5 UTP--glucose-1-phosphate uridylyltransferase OS=Mus musculus OX=10090 GN=Ugp2 PE=2 SV=1; UTP--glucose-1-phosphate uridylyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Ugp2 PE=2 SV=1; UTP--glucose-1-phosphate uridylyltransferase OS=Mus musculus OX=10090 GN=Ugp2 PE=1 SV=3 0 3 3 0.5333 0 1 1 1 435.25323 1303.74515 1303.74106 3.14 0.00136 0/0 0 0 10401059 HCD 30 MS2 6.112672 664.1 51.262 61.9467 18039 18039 18029 QEplus033719.raw F4 773 466.2 642.3 642.8 696.1 764 407 3.3 1 FALSE 0.0002814 0.005601 0.487 -250 83676 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CLREEIHK [K].cLREEIHk.[D] N-Term(TMT6plex); C1(Carbamidomethyl); K8(TMT6plex) 2 Q9D1D4 Transmembrane emp24 domain-containing protein 10 OS=Mus musculus OX=10090 GN=Tmed10 PE=1 SV=1 Q9D1D4; Q3UFG5 Transmembrane emp24 domain-containing protein 10 OS=Mus musculus OX=10090 GN=Tmed10 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1 1 4 4 0.2941 0 1 1 1 386.47629 1542.88332 1542.88265 0.43 0.00017 0/0 0 0 19281110 HCD 30 MS2 11.96075 593.4 61.192 61.9587 18043 18043 18040 QEplus033719.raw F4 599.7 463.4 686.6 538.9 610.9 660.6 405 2.72 1 FALSE 0.0002119 0.004449 0.515 -250 83700 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGDSSAEELK [K].kGDSSAEELk.[L] N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex) 2 P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 Q5RKP3; P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=2 SV=1; 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 1 2 2 0.5178 0 1 1 1 876.01013 1751.01299 1751.01539 -1.37 -0.0012 0/0 0 0 5476632 HCD 30 MS2 24.12397 381.8 110 61.976 18050 18050 18040 QEplus033719.raw F4 412 301.5 401.5 342.2 456.6 377.1 425 3.09 1 FALSE 1.14E-05 2.07E-07 1.367 -250 83711 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GKEEQVNSMK [R].gkEEQVNSMk.[A] N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex) 34 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q6A0E9; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; MKIAA0004 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0004 PE=4 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 1 3 3 0.6349 0 1 1 1 613.01923 1837.04312 1837.04564 -1.37 -0.00084 0/0 0 0 2879094.75 HCD 30 MS2 22.68064 664.2 110 61.9858 18053 18053 18051 QEplus033719.raw F4 664.3 556 715.1 590.1 720 739.7 436 3.67 1 FALSE 1.14E-05 2.31E-08 1.548 -250 83717 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVTHLNNVK [R].aVTHLNNVk.[L] N-Term(TMT6plex); K9(TMT6plex) 2 Q921F4 Heterogeneous nuclear ribonucleoprotein L-like OS=Mus musculus OX=10090 GN=Hnrnpll PE=1 SV=3 Q921F4; Q9CSH0 Heterogeneous nuclear ribonucleoprotein L-like OS=Mus musculus OX=10090 GN=Hnrnpll PE=1 SV=3; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpll PE=2 SV=1 0 3 3 0.5425 0 1 1 1 485.30078 1453.88779 1453.88912 -0.91 -0.00044 0/0 0 0 21894336 HCD 30 MS2 13.30037 825.6 77.046 61.9903 18055 18055 18051 QEplus033719.raw F4 879 748.8 889.8 593.8 967.8 874.3 265 4.24 1 FALSE 1.14E-05 2.88E-07 1.34 -250 83726 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNQELQEINR [R].tNQELQEINR.[V] N-Term(TMT6plex) 6 Q542G9 Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1 B0V2N8; Q9CZI7; B0V2N5; B0V2N7; Q99KH3; Q542G9 Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1 0 3 3 0.6336 0 1 1 1 491.93329 1473.78531 1473.78589 -0.39 -0.00019 0/0 0 0 13248183 HCD 30 MS2 43.18677 1144.3 75.642 61.9948 18057 18057 18051 QEplus033719.raw F4 1046.6 1002.1 1110.6 985 1630.5 1091.2 307 3.93 1 FALSE 1.14E-05 0.0002366 0.785 -250 83735 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDEEQMK [K].vDEEQMk.[Y] N-Term(TMT6plex); K7(TMT6plex) 1 P27641 X-ray repair cross-complementing protein 5 OS=Mus musculus OX=10090 GN=Xrcc5 PE=1 SV=4 P27641 X-ray repair cross-complementing protein 5 OS=Mus musculus OX=10090 GN=Xrcc5 PE=1 SV=4 0 2 2 0.5033 0 1 1 1 668.86115 1336.71501 1336.71827 -2.44 -0.00163 0/0 0 0 5365678 HCD 30 MS2 0 868.1 110 61.9974 18058 18058 18051 QEplus033719.raw F4 847.9 795.7 940.2 673.2 1079.8 871.5 305 3.04 1 FALSE 0.0006216 0.00931 0.416 -250 83742 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MSCMDNK [K].mScMDNk.[D] N-Term(TMT6plex); C3(Carbamidomethyl); K7(TMT6plex) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.7439 0 1 1 1 448.55746 1343.65784 1343.65218 4.21 0.00189 0/0 0 0 4955663.5 HCD 30 MS2 30.46449 604.8 110 61.9999 18059 18059 18051 QEplus033719.raw F4 568.1 570.2 649.2 409.7 841.4 590 91 2.89 1 FALSE 0.005512 0.09322 0.025 -250 83750 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMGESDDSILR [R].rMGESDDSILR.[L] N-Term(TMT6plex) 2 Q9CQR2 40S ribosomal protein S21 OS=Mus musculus OX=10090 GN=Rps21 PE=1 SV=1 Q9CQR2; Q8C1L7 40S ribosomal protein S21 OS=Mus musculus OX=10090 GN=Rps21 PE=1 SV=1; 40S ribosomal protein S21 OS=Mus musculus OX=10090 PE=2 SV=1 1 2 2 0.5916 0 1 1 1 754.38953 1507.77178 1507.77361 -1.21 -0.00092 0/0 0 0 2985845 HCD 30 MS2 0 119.4 110 62.0049 18061 18061 18051 QEplus033719.raw F4 124 100.3 125.3 108.1 120.3 138.2 212 3.82 1 FALSE 1.14E-05 8.53E-06 1.061 -250 83776 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEEEFK [R].tEEEFk.[KE] N-Term(TMT6plex); K6(TMT6plex) 2 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 P27773; A2AJN7 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2; Sodium bicarbonate transporter-like protein 11 OS=Mus musculus OX=10090 GN=Slc4a11 PE=2 SV=1 0 2 2 0.2294 0 1 1 1 620.8465 1240.68572 1240.68254 2.56 0.00159 0/0 0 0 7999569 HCD 30 MS2 21.99088 1114.2 110 62.0192 18066 18066 18062 QEplus033719.raw F4 1117.2 925.1 1167.9 982.5 1296.1 1196.5 261 2.31 1 FALSE 0.002948 0.05753 0.121 -250 83793 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLVNEK [R].nLVNEk.[L] N-Term(TMT6plex); K6(TMT6plex) 14 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 Q9QXZ0-3; B1ARU4; E9QA63; E9QNP1; Q5DTZ2; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8 Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; MKIAA1251 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 2 2 0.2439 0 1 1 1 587.86365 1174.72002 1174.71959 0.36 0.00021 0/0 0 0 5719719 HCD 30 MS2 14.82028 999.9 110 62.0242 18068 18068 18062 QEplus033719.raw F4 1127.6 485.6 1043.5 1167.1 695.5 1480.3 409 2.46 3 FALSE 0.002071 0.03813 0.181 -250 83812 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STDIVK [R].sTDIVk.[A] N-Term(TMT6plex); K6(TMT6plex) 3 D3YUM1 "NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1" D3Z1U9; D3YUM1; Q91YT0 "NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1; NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1; NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv1 PE=1 SV=1" 0 2 2 0.2708 0 1 1 1 560.85382 1120.70036 1120.6978 2.29 0.00128 0/0 0 0 4473792 HCD 30 MS2 88.16579 1214.8 110 62.0292 18070 18070 18062 QEplus033719.raw F4 1261.9 876.5 1249.7 1273.2 1279 1348.4 138 1.92 1 FALSE 0.002157 0.04101 0.171 -250 83822 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQCALAASK [R].tQcALAASk.[L] N-Term(TMT6plex); C3(Carbamidomethyl); K9(TMT6plex) 4 Q3TRJ1 Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=1 SV=1 Q3TRJ1; Q3UQJ1; Q3TKU6; Q3TJ43 Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1; Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1; Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1 0 2 2 0.608 0 1 1 1 704.4054 1407.80351 1407.80301 0.36 0.00025 0/0 0 0 3923810.5 HCD 30 MS2 23.76746 431 110 62.0317 18071 18071 18062 QEplus033719.raw F4 434.3 381.1 474.3 368.7 459 468.5 439 3.24 1 FALSE 1.14E-05 6.97E-07 1.267 -250 83873 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSDENLDLAR [R].qSDENLDLAR.[A] N-Term(TMT6plex) 1 Q8CGK3 "Lon protease homolog, mitochondrial OS=Mus musculus OX=10090 GN=Lonp1 PE=1 SV=2" Q8CGK3 "Lon protease homolog, mitochondrial OS=Mus musculus OX=10090 GN=Lonp1 PE=1 SV=2" 0 2 2 0.5876 0 1 1 1 695.36346 1389.71965 1389.71714 1.81 0.00126 0/0 0 0 11756581 HCD 30 MS2 55.85012 803.8 110 62.0511 18078 18078 18073 QEplus033719.raw F4 818.6 636.6 871.7 745.3 817.5 933.3 230 2.91 1 FALSE 1.14E-05 1.51E-05 1.013 -250 83896 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGDGTQLACK [K].kGDGTQLAck.[V] N-Term(TMT6plex); K1(TMT6plex); C9(Carbamidomethyl); K10(TMT6plex) 5 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 1 3 3 0.7359 0 1 1 1 589.01385 1765.02701 1765.02452 1.41 0.00083 0/0 0 0 5434194 HCD 30 MS2 0 789.3 110 62.0585 18081 18081 18073 QEplus033719.raw F4 914.5 333.5 713.7 1201.7 458.9 1113.3 449 4.43 2 FALSE 1.14E-05 6.61E-09 1.651 -250 83917 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVAAGQPMK [K].nVAAGQPMk.[R] N-Term(TMT6plex); K9(TMT6plex) 2 Q8CCP0 Nuclear export mediator factor Nemf OS=Mus musculus OX=10090 GN=Nemf PE=1 SV=2 Q8CCP0-2; Q8CCP0 Isoform 2 of Nuclear export mediator factor Nemf OS=Mus musculus OX=10090 GN=Nemf; Nuclear export mediator factor Nemf OS=Mus musculus OX=10090 GN=Nemf PE=1 SV=2 0 2 2 0.5414 0 1 1 1 687.40247 1373.79766 1373.79753 0.09 0.00006 0/0 0 0 4993811 HCD 30 MS2 29.44157 110 62.0709 18085 18085 18084 QEplus033719.raw F4 358 2.66 1 FALSE 1.14E-05 0.0001038 0.854 -250 83932 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVESYTK [R].nVESYTk.[L] N-Term(TMT6plex); K7(TMT6plex) 4 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q91YQ5; Q5RKP4; Q3U900; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 0 2 2 0.4144 0 1 1 1 649.87158 1298.73589 1298.73564 0.19 0.00012 0/0 0 0 30949454 HCD 30 MS2 12.87314 1075.8 59.888 62.0757 18087 18087 18084 QEplus033719.raw F4 959.1 1010.5 1240.4 894 1264.4 1086.6 308 2.92 1 FALSE 0.0008183 0.01118 0.386 -250 83947 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEAQIAAK [K].aEAQIAAk.[N] N-Term(TMT6plex); K8(TMT6plex) 1 P05202 "Aspartate aminotransferase, mitochondrial OS=Mus musculus OX=10090 GN=Got2 PE=1 SV=1" P05202 "Aspartate aminotransferase, mitochondrial OS=Mus musculus OX=10090 GN=Got2 PE=1 SV=1" 0 3 3 0.4238 0 1 1 1 420.5957 1259.77256 1259.77236 0.16 0.00007 0/0 0 0 12672379 HCD 30 MS2 12.78752 504.3 85.823 62.0802 18089 18089 18084 QEplus033719.raw F4 565.6 345.5 502.7 482.7 541.3 588.2 558 2.69 1 FALSE 0.0002814 0.005628 0.487 -250 83963 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSCTAVVDVSDR [K].sScTAVVDVSDR.[M] N-Term(TMT6plex); C3(Carbamidomethyl) 5 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.5172 0 1 1 1 762.87988 1524.75249 1524.75254 -0.03 -0.00002 0/0 0 0 5161419.5 HCD 30 MS2 0 305.1 110 62.0851 18091 18091 18084 QEplus033719.raw F4 356.1 92.4 279 438.9 135.7 528.3 133 5.22 2 FALSE 1.14E-05 1.64E-12 2.336 -250 83985 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEPGSVGAQGPPGPSGEEGKR [K].gEPGSVGAQGPPGPSGEEGkR.[G] N-Term(TMT6plex); K20(TMT6plex) 3 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 1 3 3 0.8157 0 1 1 1 803.42474 2408.25968 2408.25702 1.1 0.00089 0/0 0 0 3170319.25 HCD 30 MS2 38.02891 86.9 110 62.0923 18094 18094 18084 QEplus033719.raw F4 72.5 81.8 104.4 75.3 84.6 102.7 388 5.75 1 FALSE 1.14E-05 6.31E-16 3.256 -250 83998 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAGLVSK [K].qAGLVSk.[I] N-Term(TMT6plex); K7(TMT6plex) 1 Q8BH95 "Enoyl-CoA hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Echs1 PE=1 SV=1" Q8BH95 "Enoyl-CoA hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Echs1 PE=1 SV=1" 0 2 2 0.3977 0 1 1 1 580.87354 1160.73979 1160.74033 -0.46 -0.00027 0/0 0 0 26548040 HCD 30 MS2 25.19548 995.7 45.614 62.1019 18097 18097 18095 QEplus033719.raw F4 1024.3 803.9 1043.7 924.3 1185.2 992.8 247 2.59 1 FALSE 0.0004888 0.007694 0.445 -250 84008 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLNTNIDGRR [R].vLNTNIDGRR.[K] N-Term(TMT6plex) 6 Q561N5 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1 S4R1N6; Q561N5; Q3TW65; F6YVP7; A0A3Q4EGP3; A0A1Y7VKY1 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=3 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps6 PE=3 SV=2; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=4 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps5 PE=3 SV=1 1 3 3 0.3806 0 1 1 1 462.93839 1386.8006 1386.80148 -0.63 -0.00029 0/0 0 0 26847968 HCD 30 MS2 17.82517 687.9 38.819 62.1042 18098 18098 18095 QEplus033719.raw F4 707.5 616.3 786.1 576.9 749.3 691.4 356 3.1 1 FALSE 1.14E-05 1.62E-05 1.007 -250 84042 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMGESDDSILR [R].rMGESDDSILR.[L] N-Term(TMT6plex) 2 Q9CQR2 40S ribosomal protein S21 OS=Mus musculus OX=10090 GN=Rps21 PE=1 SV=1 Q9CQR2; Q8C1L7 40S ribosomal protein S21 OS=Mus musculus OX=10090 GN=Rps21 PE=1 SV=1; 40S ribosomal protein S21 OS=Mus musculus OX=10090 PE=2 SV=1 1 3 3 0.5117 0 1 1 1 503.26291 1507.77417 1507.77361 0.38 0.00019 0/0 0 0 77734128 HCD 30 MS2 45.35104 398.6 11.48 62.1367 18108 18108 18107 QEplus033719.raw F4 398.7 262.8 455 425.8 310.3 539 201 3.85 1 FALSE 1.14E-05 1.08E-08 1.611 -250 84049 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LNHQEFK [R].lNHQEFk.[S] N-Term(TMT6plex); K7(TMT6plex) 12 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; Q3TYI8; B2RXX6; Q6PA04; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5; Q58ES7 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1" 0 3 3 0.5287 0 1 1 1 458.60208 1373.79169 1373.79416 -1.79 -0.00082 0/0 0 0 11895746 HCD 30 MS2 42.69237 1146.1 110 62.1392 18109 18109 18107 QEplus033719.raw F4 1220.6 949.9 1305.8 907.7 1216.8 1275.8 406 3.48 2 FALSE 1.14E-05 0.0003837 0.745 -250 84056 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVQVDVK [K].rVQVDVk.[M] N-Term(TMT6plex); K7(TMT6plex) 3 Q5EBP9 Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 Q62318-2; Q5EBP9; Q3UDN8 Isoform 2 of Transcription intermediary factor 1-beta OS=Mus musculus OX=10090 GN=Trim28; Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 1 3 3 0.2685 0 1 1 1 434.61505 1301.8306 1301.83054 0.05 0.00002 0/0 0 0 28774476 HCD 30 MS2 10.95082 675.9 42.333 62.1414 18110 18110 18107 QEplus033719.raw F4 765.6 557.1 710 477.3 797.7 747.5 392 2.98 1 FALSE 0.0002419 0.005045 0.5 -250 84065 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSYVGDEAQSK [KR].dSYVGDEAQSk.[RT] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; Q8CF71; P63268; Q61274; V9GXQ2; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Predicted gene 17087 OS=Mus musculus OX=10090 GN=Gm17087 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 4 4 0.5839 0 1 1 1 414.96771 1656.84902 1656.8481 0.55 0.00023 0/0 0 0 10817583 HCD 30 MS2 29.42113 536.8 110 62.1461 18112 18112 18107 QEplus033719.raw F4 544 416.8 577.6 461.4 574.4 646.8 231 3.22 4 FALSE 1.14E-05 0.000156 0.82 -250 84085 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQEIAPGDK [K].aQEIAPGDk.[A] N-Term(TMT6plex); K9(TMT6plex) 3 Q9CR16 Peptidyl-prolyl cis-trans isomerase D OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=3 Q9CR16; Q8BMX6; Q3UB60 Peptidyl-prolyl cis-trans isomerase D OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=3; TPR_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ppid PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppid PE=2 SV=1 0 2 2 0.4947 0 1 1 1 693.90369 1386.8001 1386.7993 0.57 0.0004 0/0 0 0 20046840 HCD 30 MS2 4.727345 801.3 110 62.1512 18114 18114 18107 QEplus033719.raw F4 884 667.4 851.6 638.4 931.4 834.8 355 2.81 1 FALSE 1.14E-05 1.16E-05 1.035 -250 84094 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVVSQTK [K].vVVSQTk.[K] N-Term(TMT6plex); K7(TMT6plex) 8 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; A0A087WRM5; Q8CE30; Q9CT46 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 2 2 0.4657 0 1 1 1 609.89465 1218.78203 1218.78219 -0.13 -0.00008 0/0 0 0 15284444 HCD 30 MS2 11.10547 1241.9 110 62.1537 18115 18115 18107 QEplus033719.raw F4 1432 1084.8 1181 988 1621.6 1144 170 2.77 1 FALSE 0.0008445 0.01183 0.376 -250 84104 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CLREEIHK [K].cLREEIHk.[D] N-Term(TMT6plex); C1(Carbamidomethyl); K8(TMT6plex) 2 Q9D1D4 Transmembrane emp24 domain-containing protein 10 OS=Mus musculus OX=10090 GN=Tmed10 PE=1 SV=1 Q9D1D4; Q3UFG5 Transmembrane emp24 domain-containing protein 10 OS=Mus musculus OX=10090 GN=Tmed10 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1 1 3 3 0.3472 0 1 1 1 514.96576 1542.88272 1542.88265 0.05 0.00002 0/0 0 0 7880788.5 HCD 30 MS2 37.59478 703.9 110 62.1562 18116 18116 18107 QEplus033719.raw F4 757.4 466.3 737.9 669.7 640.5 951.4 408 2.88 1 FALSE 0.0009259 0.0128 0.362 -250 84115 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSGGAGGLGSLR [R].tSGGAGGLGSLR.[CS] N-Term(TMT6plex) 3 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; Q9JJY2; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin (Fragment) OS=Mus musculus OX=10090 GN=des PE=4 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 2 2 0.4949 0 1 1 1 631.35687 1261.70647 1261.70618 0.23 0.00014 0/0 0 0 41127924 HCD 30 MS2 38.92318 902.4 35.847 62.166 18119 18119 18118 QEplus033719.raw F4 1021.8 459.4 876.6 1131.9 727 1197.6 407 2.95 1 FALSE 1.14E-05 1.32E-09 1.784 -250 84129 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEAQIAAK [K].aEAQIAAk.[N] N-Term(TMT6plex); K8(TMT6plex) 1 P05202 "Aspartate aminotransferase, mitochondrial OS=Mus musculus OX=10090 GN=Got2 PE=1 SV=1" P05202 "Aspartate aminotransferase, mitochondrial OS=Mus musculus OX=10090 GN=Got2 PE=1 SV=1" 0 2 2 0.5015 0 1 1 1 630.39008 1259.77287 1259.77236 0.41 0.00026 0/0 0 0 52432208 HCD 30 MS2 20.92173 1059.6 38.027 62.1708 18121 18121 18118 QEplus033719.raw F4 1104.5 730.5 1084.5 1123.6 1101.6 1213.1 558 3.25 1 FALSE 1.14E-05 0.0002182 0.792 -250 84134 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAGLCNR [R].iAGLcNR.[A] N-Term(TMT6plex); C5(Carbamidomethyl) 8 Q8VDN2 Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1 Q3TXF9; Q8VDN2; Q6ZQ49; Q9WV27; Q3UCH8; Q8R3M4; D3YYN7; Q3UHK5 Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a2 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-4 OS=Mus musculus OX=10090 GN=Atp1a4 PE=1 SV=3; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a2 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a2 PE=1 SV=1 0 2 2 0.4019 0 1 1 1 516.79498 1032.58269 1032.58217 0.51 0.00026 0/0 0 0 11133839 HCD 30 MS2 30.32371 1181.2 110 62.1733 18122 18122 18118 QEplus033719.raw F4 1446.5 739.8 1270.2 1353.9 807 1470 289 2.14 1 FALSE 0.001946 0.03361 0.2 -250 84168 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STDVYTEK [K].sTDVYTEk.[H] N-Term(TMT6plex); K8(TMT6plex) 2 P43407 Syndecan-2 OS=Mus musculus OX=10090 GN=Sdc2 PE=1 SV=1 Q99L05; P43407 Syndecan (Fragment) OS=Mus musculus OX=10090 GN=Sdc2 PE=2 SV=1; Syndecan-2 OS=Mus musculus OX=10090 GN=Sdc2 PE=1 SV=1 0 2 2 0.6656 0 1 1 1 700.8869 1400.76653 1400.76733 -0.57 -0.0004 0/0 0 0 5724699 HCD 30 MS2 38.39845 689.7 110 62.1856 18127 18127 18118 QEplus033719.raw F4 654.5 528.8 701.2 542 876.4 835.5 304 3.26 1 FALSE 1.14E-05 5.27E-05 0.91 -250 84174 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGCTDINECEIGAHNCGR [K].tGcTDINEcEIGAHNcGR.[H] N-Term(TMT6plex); C3(Carbamidomethyl); C9(Carbamidomethyl); C16(Carbamidomethyl) 2 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 0 3 3 0.8896 0 1 1 1 765.00439 2292.99863 2292.99571 1.27 0.00097 0/0 0 0 1598441.875 HCD 30 MS2 0 122.5 110 62.1881 18128 18128 18118 QEplus033719.raw F4 136.1 79.7 120.3 151.3 99.1 148.7 19 7.79 1 FALSE 1.14E-05 6.31E-16 4.071 -250 84181 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDVDIRK [K].cDVDIRk.[D] N-Term(TMT6plex); C1(Carbamidomethyl); K7(TMT6plex) 23 O89054; Q3UAF6 Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q8BFZ3; Q3UCF8; Q3TSB7; Q9QZ83; O89054; Q3UAF6; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; F8WGM8; Q99NC5; Q3TIJ9; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P63260; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 1 3 3 0.6281 0 1 1 1 455.26456 1363.77912 1363.77679 1.71 0.00078 0/0 0 0 2115470080 HCD 30 MS2 4.259818 611.4 0.573 62.1954 18130 18130 18129 QEplus033719.raw F4 583.5 664.5 685.3 349.7 864.7 520.8 427 2.42 2 FALSE 0.001851 0.03145 0.209 -250 84203 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DETNYGIPQR [R].dETNYGIPQR.[A] N-Term(TMT6plex) 1 P68040 Receptor of activated protein C kinase 1 OS=Mus musculus OX=10090 GN=Rack1 PE=1 SV=3 P68040 Receptor of activated protein C kinase 1 OS=Mus musculus OX=10090 GN=Rack1 PE=1 SV=3 0 2 2 1 0 1 1 1 711.36523 1421.72319 1421.72222 0.68 0.00048 0/0 0 0 4467523.5 HCD 30 MS2 0 367.1 110 62.2075 18135 18135 18129 QEplus033719.raw F4 369.7 276.5 380.4 406.8 347.4 421.7 222 3.26 1 FALSE 1.14E-05 5.84E-07 1.282 -250 84211 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGSAAPAGPPAR [R].lGSAAPAGPPAR.[G] N-Term(TMT6plex) 2 Q80UY1 Carnosine N-methyltransferase OS=Mus musculus OX=10090 GN=Carnmt1 PE=1 SV=1 A0A494BA54; Q80UY1 Carnosine N-methyltransferase OS=Mus musculus OX=10090 GN=Carnmt1 PE=1 SV=1; Carnosine N-methyltransferase OS=Mus musculus OX=10090 GN=Carnmt1 PE=1 SV=1 0 2 2 0.4552 0 1 1 1 647.37738 1293.74748 1293.74765 -0.13 -0.00008 0/0 0 0 3580814.25 HCD 30 MS2 35.10915 530.4 110 62.2125 18137 18137 18129 QEplus033719.raw F4 532.4 436 537.8 455.5 648.2 572.5 475 2.79 1 FALSE 1.14E-05 3.73E-06 1.129 -250 84221 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELNYVAR [R].eLNYVAR.[Q] N-Term(TMT6plex) 2 Q3V1C8 Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Mus musculus OX=10090 GN=Nudt2 PE=2 SV=1 Q3V1C8; P56380 Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Mus musculus OX=10090 GN=Nudt2 PE=2 SV=1; Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Mus musculus OX=10090 GN=Nudt2 PE=1 SV=3 0 2 2 0.3716 0 1 1 1 547.31458 1093.62187 1093.62032 1.42 0.00077 0/0 0 0 17801266 HCD 30 MS2 55.12106 1278 69.787 62.2147 18138 18138 18129 QEplus033719.raw F4 1263.9 1074.3 1374.9 1215.2 1432.1 1307.6 249 1.83 1 FALSE 0.001541 0.02327 0.256 -250 84263 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RILEDK [K].rILEDk.[E] N-Term(TMT6plex); K6(TMT6plex) 2 Q9CQ60 6-phosphogluconolactonase OS=Mus musculus OX=10090 GN=Pgls PE=1 SV=1 D3Z4X1; Q9CQ60 6-phosphogluconolactonase OS=Mus musculus OX=10090 GN=Pgls PE=1 SV=1; 6-phosphogluconolactonase OS=Mus musculus OX=10090 GN=Pgls PE=1 SV=1 1 3 3 0 0 1 1 1 411.26416 1231.77793 1231.77744 0.39 0.00016 0/0 0 0 4045772.25 HCD 30 MS2 61.53617 505.8 110 62.2318 18144 18144 18140 QEplus033719.raw F4 542.5 364.5 502.2 435.2 603 587.5 531 2.92 1 FALSE 0.00459 0.0814 0.058 -250 84287 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMGSQEDDSGNKPSSYS [K].sMGSQEDDSGNkPSSYS.[-] N-Term(TMT6plex); K12(TMT6plex) 2 Q3UQL2 COP9 signalosome complex subunit 3 OS=Mus musculus OX=10090 GN=Cops3 PE=1 SV=1 Q3UQL2; Q3TEA5 COP9 signalosome complex subunit 3 OS=Mus musculus OX=10090 GN=Cops3 PE=1 SV=1; COP9 signalosome complex subunit 3 (Fragment) OS=Mus musculus OX=10090 GN=Cops3 PE=2 SV=1 0 3 3 0.8465 0 1 1 1 745.34753 2234.02805 2234.02833 -0.12 -0.00009 0/0 0 0 3526538.5 HCD 30 MS2 0 188.3 110 62.2391 18147 18147 18140 QEplus033719.raw F4 175.8 176 187.3 175.1 221.1 194.5 61 4.56 1 FALSE 1.14E-05 3.37E-07 1.327 -250 84312 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSYVGDEAQSK [KR].dSYVGDEAQSk.[RT] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; Q8CF71; P63268; Q61274; V9GXQ2; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Predicted gene 17087 OS=Mus musculus OX=10090 GN=Gm17087 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 2 2 0.5575 0 1 1 1 828.92822 1656.84917 1656.8481 0.64 0.00053 0/0 0 0 806170112 HCD 30 MS2 5.495732 719.7 2.893 62.254 18152 18152 18151 QEplus033719.raw F4 695.5 606.6 814.7 643.4 789 768.7 229 4.52 4 FALSE 1.14E-05 7.87E-09 1.637 -250 84326 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIGVKPPR [K].aIGVkPPR.[G] N-Term(TMT6plex); K5(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 0 3 3 0.4391 0 1 1 1 432.62402 1295.85752 1295.85636 0.89 0.00038 0/0 0 0 33274718 HCD 30 MS2 29.44908 804.6 41.268 62.2585 18154 18154 18151 QEplus033719.raw F4 848.6 680.2 927.4 658 870.4 843.1 27 2.71 1 FALSE 0.00155 0.02338 0.255 -250 84334 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EANEILQR [K].eANEILQR.[S] N-Term(TMT6plex) 8 Q3U9N8; F7DEU6 Inosine-5'-monophosphate dehydrogenase OS=Mus musculus OX=10090 GN=Impdh2 PE=2 SV=1;Inosine-5'-monophosphate dehydrogenase OS=Mus musculus OX=10090 GN=Impdh1 PE=1 SV=2 E0CYE2; E0CXK0; Q3U9N8; P50096; A0A0A6YXS4; Q3UPJ2; F7DEU6; Q3UAT9 Inosine-5'-monophosphate dehydrogenase OS=Mus musculus OX=10090 GN=Impdh1 PE=1 SV=1; Inosine-5'-monophosphate dehydrogenase 1 (Fragment) OS=Mus musculus OX=10090 GN=Impdh1 PE=1 SV=1; Inosine-5'-monophosphate dehydrogenase OS=Mus musculus OX=10090 GN=Impdh2 PE=2 SV=1; Inosine-5'-monophosphate dehydrogenase 1 OS=Mus musculus OX=10090 GN=Impdh1 PE=1 SV=2; Inosine-5'-monophosphate dehydrogenase 2 (Fragment) OS=Mus musculus OX=10090 GN=Impdh2 PE=1 SV=1; Inosine-5'-monophosphate dehydrogenase OS=Mus musculus OX=10090 GN=Impdh2 PE=2 SV=1; Inosine-5'-monophosphate dehydrogenase OS=Mus musculus OX=10090 GN=Impdh1 PE=1 SV=2; Inosine-5'-monophosphate dehydrogenase OS=Mus musculus OX=10090 GN=Impdh2 PE=1 SV=1 0 2 2 0.4951 0 1 1 1 601.34064 1201.674 1201.67382 0.15 0.00009 0/0 0 0 14747470 HCD 30 MS2 7.178086 886.9 110 62.2611 18155 18155 18151 QEplus033719.raw F4 906.1 817.8 888.3 660.2 1192.7 856.5 311 3.05 2 FALSE 1.14E-05 0.0001416 0.828 -250 84339 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVSDAAYK [K].aVSDAAYk.[I] N-Term(TMT6plex); K8(TMT6plex) 3 Z4YJF5 Myomesin-1 OS=Mus musculus OX=10090 GN=Myom1 PE=1 SV=1 Z4YJF5; Q62234; Q62234-2 Myomesin-1 OS=Mus musculus OX=10090 GN=Myom1 PE=1 SV=1; Myomesin-1 OS=Mus musculus OX=10090 GN=Myom1 PE=1 SV=2; Isoform 2 of Myomesin-1 OS=Mus musculus OX=10090 GN=Myom1 0 2 2 0.2391 0 1 1 1 641.87537 1282.74346 1282.74072 2.13 0.00137 0/0 0 0 9128405 HCD 30 MS2 32.54482 673.9 110 62.2661 18157 18157 18151 QEplus033719.raw F4 686.2 310.1 582.2 1096.7 450.9 917.1 334 1.38 1 FALSE 0.00079 0.01102 0.388 -250 84348 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REMDQTMAANAQK [K].rEMDQTMAANAQk.[N] N-Term(TMT6plex); K13(TMT6plex) 2 Q9DBP5 UMP-CMP kinase OS=Mus musculus OX=10090 GN=Cmpk1 PE=1 SV=1 Q9DBP5; A0A0R4J093 UMP-CMP kinase OS=Mus musculus OX=10090 GN=Cmpk1 PE=1 SV=1; UMP-CMP kinase OS=Mus musculus OX=10090 GN=Cmpk1 PE=1 SV=1 1 3 3 0.7016 0 1 1 1 651.34393 1952.01725 1952.00939 4.03 0.00262 0/0 0 0 4023844 HCD 30 MS2 29.75716 525.6 110 62.2686 18158 18158 18151 QEplus033719.raw F4 539.5 441.9 578.7 391.2 639.5 563.1 319 6.3 1 FALSE 1.14E-05 1.09E-14 2.75 -250 84374 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIYGEK [RK].sIYGEk.[F] N-Term(TMT6plex); K6(TMT6plex) 5 Q3UAJ1 Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1 Q3TE63; Q3UAJ1; Q5SVY2; Q9CZK9; A0A1L1SST0 Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1 0 2 2 0.3478 0 1 1 1 577.84515 1154.68303 1154.68215 0.77 0.00044 0/0 0 0 502387232 HCD 30 MS2 5.98676 923.3 2.709 62.2834 18163 18163 18162 QEplus033719.raw F4 892.3 729.7 970.7 753.2 1234.9 958.8 187 2.3 1 FALSE 0.009312 0.1734 -0.111 -250 84384 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDVDIRK [K].cDVDIRk.[D] N-Term(TMT6plex); C1(Carbamidomethyl); K7(TMT6plex) 23 O89054; Q3UAF6 Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q8BFZ3; Q3UCF8; Q3TSB7; Q9QZ83; O89054; Q3UAF6; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; F8WGM8; Q99NC5; Q3TIJ9; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P63260; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 1 2 2 0.5708 0 1 1 1 682.39264 1363.778 1363.77679 0.89 0.00061 0/0 0 0 124159896 HCD 30 MS2 5.462915 552 15.976 62.2857 18164 18164 18162 QEplus033719.raw F4 534.5 555.2 599.3 368 766.3 488.5 460 2.4 2 FALSE 0.001395 0.02 0.281 -250 84405 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QREITLK [K].qREITLk.[G] N-Term(TMT6plex); K7(TMT6plex) 5 Q9JIK5 Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3 Q8K2L4; Q6PCP0; Q9JIK5; Q3ULC7; Q9CWZ5 RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=1; Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=2 1 3 3 0.3062 0 1 1 1 449.29086 1345.85804 1345.85676 0.95 0.00043 0/0 0 0 8508093 HCD 30 MS2 48.63992 758.9 110 62.293 18167 18167 18162 QEplus033719.raw F4 673.9 654.3 863.7 520.4 1066.5 774.7 303 3.07 1 FALSE 0.00165 0.02696 0.233 -250 84411 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KNMEQTVK [K].kNMEQTVk.[DX] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 7 Q5SX39; P13542 Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q56A77; B2RWW8; Q5SX39; Q61933; G3UW82; P13542; Q9JHR4 "Myh4 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin heavy chain (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2; Myosin heavy chain IIB (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1" 1 3 3 0.4368 0 1 1 1 555.66931 1664.99338 1664.99724 -2.32 -0.00129 0/0 0 0 4227695 HCD 30 MS2 29.92014 867.4 110 62.2955 18168 18168 18162 QEplus033719.raw F4 931.5 443.9 611.6 1830 519.2 868.5 384 3.48 2 FALSE 1.14E-05 9.09E-05 0.865 -250 84418 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AFSMDDR [R].aFSMDDR.[I] N-Term(TMT6plex) 5 Q9QZ06 Toll-interacting protein OS=Mus musculus OX=10090 GN=Tollip PE=1 SV=1 A9JEI5; Q9QZ06; Q8C5G6; F7AT44; Q8BQL7 Toll-interacting protein OS=Mus musculus OX=10090 GN=Tollip PE=1 SV=1; Toll-interacting protein OS=Mus musculus OX=10090 GN=Tollip PE=1 SV=1; Toll-interacting protein OS=Mus musculus OX=10090 GN=Tollip PE=1 SV=1; Toll-interacting protein OS=Mus musculus OX=10090 GN=Tollip PE=1 SV=2; CUE domain-containing protein OS=Mus musculus OX=10090 GN=Tollip PE=2 SV=1 0 2 2 0.5019 0 1 1 1 535.76099 1070.5147 1070.51381 0.83 0.00044 0/0 0 0 4153467.5 HCD 30 MS2 20.11713 686.8 110 62.298 18169 18169 18162 QEplus033719.raw F4 691.9 556.6 745 664.1 717.9 745.3 53 2.63 1 FALSE 0.001359 0.01947 0.286 -250 84430 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSYGIGEEEHDQEGR [K].vSYGIGEEEHDQEGR.[V] N-Term(TMT6plex) 3 P28352 DNA-(apurinic or apyrimidinic site) endonuclease OS=Mus musculus OX=10090 GN=Apex1 PE=1 SV=2 D3Z6R9; D3Z124; P28352 DNA-(apurinic or apyrimidinic site) endonuclease (Fragment) OS=Mus musculus OX=10090 GN=Apex1 PE=1 SV=2; DNA-(apurinic or apyrimidinic site) endonuclease (Fragment) OS=Mus musculus OX=10090 GN=Apex1 PE=1 SV=1; DNA-(apurinic or apyrimidinic site) endonuclease OS=Mus musculus OX=10090 GN=Apex1 PE=1 SV=2 0 3 3 0.7926 0 1 1 1 645.30786 1933.90903 1933.90891 0.06 0.00004 0/0 0 0 9778333 HCD 30 MS2 60.98872 723.3 110 62.3029 18171 18171 18162 QEplus033719.raw F4 742.4 606.1 769.9 692.4 758.6 770.2 75 4.34 1 FALSE 1.14E-05 6.89E-15 2.787 -250 84449 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FAANPNQNK [K].fAANPNQNk.[N] N-Term(TMT6plex); K9(TMT6plex) 7 Q8BM84 ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1 Q3TT05; Q3UFF9; Q8BTQ1; Q8BM84; P70372; Q8BVF8; Q8BW03 ELAV-like protein (Fragment) OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein (Fragment) OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein 1 OS=Mus musculus OX=10090 GN=Elavl1 PE=1 SV=2; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1; ELAV-like protein OS=Mus musculus OX=10090 GN=Elavl1 PE=2 SV=1 0 2 2 0.6309 0 1 1 1 731.41486 1461.82244 1461.82143 0.69 0.0005 0/0 0 0 2482408 HCD 30 MS2 0 300.2 110 62.3152 18175 18175 18173 QEplus033719.raw F4 302 263.5 308.7 265.5 351.8 309.5 415 3.63 1 FALSE 1.14E-05 2.03E-05 0.989 -250 84456 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DMFCAGR [R].dMFcAGR.[V] N-Term(TMT6plex); C4(Carbamidomethyl) 9 Q8C5Q5 T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1 Q3TET0; Q3UDB1; Q3UIJ0; Q8C5Q5; A0A0N4SV00; Q3TJN2; A0A0N4SUI8; Q3THH8; P80313 T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta (Fragment) OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=1 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta (Fragment) OS=Mus musculus OX=10090 GN=Cct7 PE=1 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=1 SV=1 0 2 2 0.6116 0 1 1 1 543.25787 1085.50847 1085.50695 1.4 0.00076 0/0 0 0 9660057 HCD 30 MS2 15.36786 1222.2 110 62.3177 18176 18176 18173 QEplus033719.raw F4 1278.2 1002.7 1285.6 1117.6 1367.7 1281.7 25 2.42 1 FALSE 0.001117 0.01478 0.335 -250 84465 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CHTIMNCTQTCPK [R].cHTIMNcTQTcPk.[G] N-Term(TMT6plex); C1(Carbamidomethyl); C7(Carbamidomethyl); C11(Carbamidomethyl); K13(TMT6plex) 3 Q9CQA3 "Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Mus musculus OX=10090 GN=Sdhb PE=1 SV=1" Q9CQA3; Q0QEZ4; Q3TE45 "Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Mus musculus OX=10090 GN=Sdhb PE=1 SV=1; Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Sdhb PE=2 SV=1; Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Mus musculus OX=10090 GN=Sdhb PE=2 SV=1" 0 4 4 0.706 0 1 1 1 528.00897 2109.01406 2109.01138 1.27 0.00067 0/0 0 0 10276411 HCD 30 MS2 35.40161 626.9 110 62.3202 18177 18177 18173 QEplus033719.raw F4 710.9 520.2 674.5 599.5 604.8 651.4 131 4.66 1 FALSE 1.14E-05 2.25E-08 1.55 -250 84471 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESTPETEEGAPTTSEEK [K].eSTPETEEGAPTTSEEk.[K] N-Term(TMT6plex); K17(TMT6plex) 1 Q9DC77 Small muscular protein OS=Mus musculus OX=10090 GN=Smpx PE=1 SV=2 Q9DC77 Small muscular protein OS=Mus musculus OX=10090 GN=Smpx PE=1 SV=2 0 3 3 0.8146 0 1 1 1 760.71045 2280.11679 2280.1131 1.62 0.00123 0/0 0 0 3250702.5 HCD 30 MS2 0 201.3 110 62.3228 18178 18178 18173 QEplus033719.raw F4 239.9 81.6 183.9 292.9 102 307.6 192 6.15 1 FALSE 1.14E-05 1.06E-10 1.993 -250 84478 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQAALEDK [K].tQAALEDk.[L] N-Term(TMT6plex); K8(TMT6plex) 2 Q80YS6 Actin filament-associated protein 1 OS=Mus musculus OX=10090 GN=Afap1 PE=1 SV=1 E9Q8X9; Q80YS6 Actin filament-associated protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Afap1 PE=1 SV=1; Actin filament-associated protein 1 OS=Mus musculus OX=10090 GN=Afap1 PE=1 SV=1 0 2 2 0.0856 0 1 1 1 667.3894 1333.77153 1333.77275 -0.91 -0.00061 0/0 0 0 5193851.5 HCD 30 MS2 15.82453 551 110 62.3253 18179 18179 18173 QEplus033719.raw F4 553.1 442.3 578.5 502.3 641.8 587.8 547 2.22 1 FALSE 1.14E-05 0.0004972 0.723 -250 84488 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DCPTPMGTK [K].dcPTPMGTk.[G] N-Term(TMT6plex); C2(Carbamidomethyl); K9(TMT6plex) 3 P22437 Prostaglandin G/H synthase 1 OS=Mus musculus OX=10090 GN=Ptgs1 PE=1 SV=1 Q3TJN9; P22437; Q3UZ23 Prostaglandin-endoperoxide synthase OS=Mus musculus OX=10090 GN=Ptgs1 PE=2 SV=1; Prostaglandin G/H synthase 1 OS=Mus musculus OX=10090 GN=Ptgs1 PE=1 SV=1; Cyclooxygenase-1 OS=Mus musculus OX=10090 GN=Ptgs1 PE=2 SV=1 0 2 2 0.6543 0 1 1 1 732.88416 1464.76103 1464.75909 1.33 0.00097 0/0 0 0 3183251.25 HCD 30 MS2 34.49114 425.3 110 62.3278 18180 18180 18173 QEplus033719.raw F4 381.3 494.9 492.5 293.8 477.8 411.7 254 3.24 1 FALSE 1.14E-05 1.02E-06 1.236 -250 84520 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MSCMDNK [K].mScMDNk.[D] N-Term(TMT6plex); C3(Carbamidomethyl); K7(TMT6plex) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.7874 0 1 1 1 672.3302 1343.65312 1343.65218 0.7 0.00047 0/0 0 0 40199820 HCD 30 MS2 11.56377 1015.7 48.728 62.3449 18186 18186 18184 QEplus033719.raw F4 868 925.3 1038.5 774.9 1673.8 813.4 83 3.01 1 FALSE 0.001028 0.01342 0.353 -250 84527 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGDSSAEELK [K].kGDSSAEELk.[L] N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex) 2 P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 Q5RKP3; P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=2 SV=1; 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 1 3 3 0.5918 0 1 1 1 584.34357 1751.01615 1751.01539 0.43 0.00025 0/0 0 0 109413424 HCD 30 MS2 19.98355 1035.7 18.185 62.3472 18187 18187 18184 QEplus033719.raw F4 952.1 803.4 1084.7 1045.5 1243.1 1085.4 404 3.65 1 FALSE 1.14E-05 2.11E-09 1.746 -250 84533 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VCASEKPPK [K].vcASEkPPk.[D] N-Term(TMT6plex); C2(Carbamidomethyl); K6(TMT6plex); K9(TMT6plex) 2 P56399 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 P56399; Q3U4W8 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 0 3 3 0.4181 0 1 1 1 568.34277 1703.01377 1703.01289 0.52 0.00029 0/0 0 0 34991992 HCD 30 MS2 41.14043 1190.5 42.354 62.3494 18188 18188 18184 QEplus033719.raw F4 1224.9 1045.7 1241.6 997.8 1383.2 1250.1 407 2.32 1 FALSE 0.0004888 0.007728 0.444 -250 84542 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQAEQAALK [R].aQAEQAALk.[Q] N-Term(TMT6plex); K9(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5392 0 1 1 1 694.42169 1387.83611 1387.83094 3.73 0.00259 0/0 0 0 25767824 HCD 30 MS2 27.39131 992.1 67.885 62.3517 18189 18189 18184 QEplus033719.raw F4 1073.9 813.5 1065.3 873.4 1067.9 1058.4 416 3.19 2 FALSE 1.14E-05 6.62E-06 1.081 -250 84548 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLDECATK [K].dLDEcATk.[Q] N-Term(TMT6plex); C5(Carbamidomethyl); K8(TMT6plex) 3 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q3TNW1 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1 0 2 2 0.6514 0 1 1 1 705.37073 1409.73418 1409.73465 -0.34 -0.00024 0/0 0 0 20650290 HCD 30 MS2 35.75568 1003.9 72.945 62.354 18190 18190 18184 QEplus033719.raw F4 1037.4 700.3 1190.4 1271.2 654.3 1169.8 246 3.5 1 FALSE 1.14E-05 0.0001953 0.801 -250 84581 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSYVGDEAQSK [KR].dSYVGDEAQSk.[RT] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; Q8CF71; P63268; Q61274; V9GXQ2; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Predicted gene 17087 OS=Mus musculus OX=10090 GN=Gm17087 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 3 3 0.7253 0 1 1 1 552.95581 1656.85288 1656.8481 2.88 0.00159 0/0 0 0 1479028736 HCD 30 MS2 4.395248 464.6 1.211 62.371 18196 18196 18195 QEplus033719.raw F4 488.5 384.9 509.5 412.4 512.1 480 239 4.15 4 FALSE 1.14E-05 1.48E-06 1.205 -250 84589 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EALTEEK [K].eALTEEk.[C] N-Term(TMT6plex); K7(TMT6plex) 2 A0A1S6GWH5 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1 A0A1S6GWH5; Q02053 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1; Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus OX=10090 GN=Uba1 PE=1 SV=1 0 2 2 0.4232 0 1 1 1 639.37146 1277.73564 1277.7353 0.27 0.00017 0/0 0 0 36739228 HCD 30 MS2 5.753661 900.4 45.868 62.3732 18197 18197 18195 QEplus033719.raw F4 832.4 715.8 907.8 792.4 1135.1 1019 448 2.67 1 FALSE 0.0008718 0.01197 0.374 -250 84602 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVVDPGK [K].dVVDPGk.[V] N-Term(TMT6plex); K7(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.2738 0 1 1 1 594.35571 1187.70415 1187.70361 0.45 0.00027 0/0 0 0 25350954 HCD 30 MS2 16.91239 1474.8 72.342 62.3778 18199 18199 18195 QEplus033719.raw F4 1713.1 837.9 1611.6 1598.2 1027.4 2060.6 362 2.52 1 FALSE 0.001169 0.0157 0.324 -250 84611 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATVECVK [R].aTVEcVk.[D] N-Term(TMT6plex); C5(Carbamidomethyl); K7(TMT6plex) 10 Q3U1S6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1 Q3UJ74; A0A0G2JF72; Q3U1S6; Q8JZN2; Q8R3R1; Q3U672; Q3U4S7; Q3TXH7; Q80TP8; Q05C63 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Csde1 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; MKIAA0885 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Csde1 protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1 0 2 2 0.4431 0 1 1 1 632.87207 1264.73686 1264.73353 2.64 0.00167 0/0 0 0 20004418 HCD 30 MS2 26.27289 1282 88.169 62.3801 18200 18200 18195 QEplus033719.raw F4 1339.9 978.9 1312 1079.7 1597.3 1384.1 437 3.25 1 FALSE 0.0002909 0.005921 0.48 -250 84619 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTDQASMPDNTAAQK [R].nTDQASMPDNTAAQk.[V] N-Term(TMT6plex); K15(TMT6plex) 7 Q69ZX3; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; A0A2R8VHF9; A0A338P6K2; O08638-2; O08638; Q8VDD5; E9QPE7 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2 0 3 3 0.7308 0 1 1 1 684.0144 2050.02866 2050.02754 0.55 0.00037 0/0 0 0 19275552 HCD 30 MS2 26.53872 630.1 110 62.3826 18201 18201 18195 QEplus033719.raw F4 586.4 616.8 708.6 464.1 807.8 597 200 3.9 2 FALSE 1.14E-05 4.04E-10 1.882 -250 84623 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQESEVDMK [K].eQESEVDMk.[S] N-Term(TMT6plex); K9(TMT6plex) 3 Q3UY05 Complex I-23kD OS=Mus musculus OX=10090 GN=Ndufs8 PE=2 SV=1 Q3UY05; Q8K3J1; Q8VC72 "Complex I-23kD OS=Mus musculus OX=10090 GN=Ndufs8 PE=2 SV=1; NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs8 PE=1 SV=1; Complex I-23kD OS=Mus musculus OX=10090 GN=Ndufs8 PE=2 SV=2" 0 2 2 0.7138 0 1 1 1 776.90033 1552.79338 1552.79289 0.31 0.00024 0/0 0 0 9490214 HCD 30 MS2 0 555 110 62.3851 18202 18202 18195 QEplus033719.raw F4 608.3 439.7 601.1 610.4 465.8 604.9 209 3.25 1 FALSE 1.14E-05 6.86E-06 1.079 -250 84626 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVVSQTK [K].vVVSQTk.[K] N-Term(TMT6plex); K7(TMT6plex) 8 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; A0A087WRM5; Q8CE30; Q9CT46 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 3 3 0.3506 0 1 1 1 406.93237 1218.78257 1218.78219 0.31 0.00012 0/0 0 0 5240981.5 HCD 30 MS2 42.49506 567.6 110 62.3876 18203 18203 18195 QEplus033719.raw F4 570.1 439.4 591 483.2 685.7 636.4 170 2.71 1 FALSE 0.001894 0.03231 0.205 -250 84645 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNQELQEINR [R].tNQELQEINR.[V] N-Term(TMT6plex) 6 Q542G9 Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1 B0V2N8; Q9CZI7; B0V2N5; B0V2N7; Q99KH3; Q542G9 Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1 0 2 2 0.6587 0 1 1 1 737.39667 1473.78606 1473.78589 0.12 0.00009 0/0 0 0 192421072 HCD 30 MS2 2.348664 429.2 10.901 62.3999 18207 18207 18206 QEplus033719.raw F4 397.5 448.2 462.1 321.8 563.7 382.1 309 4.16 1 FALSE 1.14E-05 1.48E-06 1.205 -250 84648 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMEELHSQEMQK [R].rMEELHSQEMQk.[R] N-Term(TMT6plex); K12(TMT6plex) 3 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q810V5; Q8VIJ6; Q7TMH7 "Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1; Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1" 1 4 4 0.6544 0 1 1 1 501.76587 2004.04165 2004.04069 0.48 0.00024 0/0 0 0 40977016 HCD 30 MS2 9.8026 415.9 26.284 62.4022 18208 18208 18206 QEplus033719.raw F4 434.5 417 467.4 306.6 459.2 410.8 328 5.7 1 FALSE 1.14E-05 1.65E-08 1.576 -250 84657 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVEPPTK [R].qVEPPTk.[K] N-Term(TMT6plex); K7(TMT6plex) 13 Q91VK2; Q80T06 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1;Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1 Q91VK2; P57776-2; D3Z7N2; F6ZFU0; Q80T06; A0A0R4J1E2; D3YY68; E9QN08; A0A0R4J1L2; D3YZT9; P57776-3; P57776; D3YUQ9 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 2 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 3 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=3; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=8 0 2 2 0.3894 0 1 1 1 628.88403 1256.76079 1256.76146 -0.53 -0.00033 0/0 0 0 29004544 HCD 30 MS2 47.5936 1217 65.298 62.4045 18209 18209 18206 QEplus033719.raw F4 1321.8 919.1 1241.4 1049.5 1242.5 1527.4 292 2.26 2 FALSE 0.002801 0.05516 0.127 -250 84674 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANACNSVIK [R].aNAcNSVIk.[Q] N-Term(TMT6plex); C4(Carbamidomethyl); K9(TMT6plex) 4 O55143-2; O55143 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2 O55143-2; O55143; Q5DTI2; O54994 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; Sarcoplasmic reticulum Ca2+-ATPase (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1 0 2 2 0.5127 0 1 1 1 717.91113 1434.81499 1434.81391 0.76 0.00054 0/0 0 0 10058980 HCD 30 MS2 40.76482 842.8 110 62.4095 18211 18211 18206 QEplus033719.raw F4 889.9 519 852.3 1182.2 575.8 1037.5 480 3.53 2 FALSE 1.14E-05 9.81E-07 1.239 -250 84682 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDEQDAFK [R].sDEQDAFk.[R] N-Term(TMT6plex); K8(TMT6plex) 1 Q5SX75 Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha2 PE=1 SV=1 Q5SX75 Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha2 PE=1 SV=1 0 2 2 0.6136 0 1 1 1 699.3681 1397.72893 1397.73128 -1.68 -0.00118 0/0 0 0 8384111.5 HCD 30 MS2 10.55218 706.4 110 62.412 18212 18212 18206 QEplus033719.raw F4 796 517.5 652.1 800.6 759.5 712.9 245 3.08 1 FALSE 1.14E-05 0.0002572 0.778 -250 84689 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DETNYGIPQR [R].dETNYGIPQR.[A] N-Term(TMT6plex) 1 P68040 Receptor of activated protein C kinase 1 OS=Mus musculus OX=10090 GN=Rack1 PE=1 SV=3 P68040 Receptor of activated protein C kinase 1 OS=Mus musculus OX=10090 GN=Rack1 PE=1 SV=3 0 3 3 0.6894 0 1 1 1 474.57852 1421.72101 1421.72222 -0.85 -0.0004 0/0 0 0 11627974 HCD 30 MS2 61.09808 739.3 75.295 62.4142 18213 18213 18206 QEplus033719.raw F4 679.9 692.6 796.9 562.6 965.3 738.5 210 2.93 1 FALSE 1.14E-05 0.0003348 0.756 -250 84693 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANACNSVIK [R].aNAcNSVIk.[Q] N-Term(TMT6plex); C4(Carbamidomethyl); K9(TMT6plex) 4 O55143-2; O55143 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2 O55143-2; O55143; Q5DTI2; O54994 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; Sarcoplasmic reticulum Ca2+-ATPase (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1 0 3 3 0.5505 0 1 1 1 478.94327 1434.81525 1434.81391 0.94 0.00045 0/0 0 0 9904660 HCD 30 MS2 46.58755 656.5 110 62.4167 18214 18214 18206 QEplus033719.raw F4 638.1 525 566.5 882 568.7 758.5 481 3.27 2 FALSE 1.14E-05 0.0003334 0.757 -250 84710 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LADSLR [K].lADSLR.[L] N-Term(TMT6plex) 11 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" Q3URW8; B9EKJ1; E9Q447; B2RXX6; A3KGU9; Q3V1V5; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.0651 0 1 1 1 452.27737 903.54747 903.5461 1.52 0.00069 0/0 0 0 17944880 HCD 30 MS2 44.83107 863.5 88.066 62.429 18218 18218 18217 QEplus033719.raw F4 931.2 664 970.8 719.2 872.4 1023.5 164 2.15 2 FALSE 0.00165 0.02696 0.233 -250 84720 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTDQASMPDNTAAQK [R].nTDQASMPDNTAAQk.[V] N-Term(TMT6plex); K15(TMT6plex) 7 Q69ZX3; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; A0A2R8VHF9; A0A338P6K2; O08638-2; O08638; Q8VDD5; E9QPE7 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2 0 2 2 0.8247 0 1 1 1 1025.51819 2050.0291 2050.02754 0.76 0.00078 0/0 0 0 11215290 HCD 30 MS2 0 367.8 110 62.4316 18219 18219 18217 QEplus033719.raw F4 379.5 401.9 436.6 271.7 408.3 308.9 197 6.96 2 FALSE 1.14E-05 9.50E-15 2.761 -250 84734 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLETENAGLR [R].sLETENAGLR.[L] N-Term(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 D3YUF7; P48678; P48678-2 Prelamin-A/C (Fragment) OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=1; Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 0 2 2 0.6274 0 1 1 1 659.86188 1318.71648 1318.71641 0.05 0.00003 0/0 0 0 24279718 HCD 30 MS2 31.26184 1093.3 110 62.4386 18222 18222 18217 QEplus033719.raw F4 1228.8 908.5 1169.1 873.5 1187.9 1191.9 315 4.16 1 FALSE 1.14E-05 2.27E-06 1.17 -250 84760 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GWENHVEGQK [K].gWENHVEGQk.[L] N-Term(TMT6plex); K10(TMT6plex) 1 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 3 3 0.5237 0 1 1 1 547.9632 1641.87503 1641.87493 0.07 0.00004 0/0 0 0 13038403 HCD 30 MS2 30.30735 1163.3 110 62.4486 18226 18226 18217 QEplus033719.raw F4 1190 942.4 1235.4 1060.7 1254.5 1296.9 315 3.59 1 FALSE 1.14E-05 1.70E-05 1.003 -250 84779 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDTDDEIAK [K].dDTDDEIAk.[Y] N-Term(TMT6plex); K9(TMT6plex) 2 Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 Q3TXE5; Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 0 2 2 0.7395 0 1 1 1 740.38495 1479.76262 1479.75789 3.2 0.00237 0/0 0 0 6416351 HCD 30 MS2 61.30294 512.5 110 62.4584 18229 18229 18228 QEplus033719.raw F4 474.5 401.8 557.1 399.3 610.1 632.2 233 3.34 1 FALSE 1.14E-05 9.56E-07 1.241 -250 84792 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDLENR [K].iDLENR.[FQ] N-Term(TMT6plex) 9 Q4FJQ0 Rab7 OS=Mus musculus OX=10090 GN=Rab7 PE=1 SV=1 Q9ESF1-3; A0A2Z2CEU0; E9PYR6; Q4FJQ0; A0A0R4J1K2; B7ZN98; Q9ESF1-2; Q9ESF1; E0CZ42 Isoform 3 of Otoferlin OS=Mus musculus OX=10090 GN=Otof; Otoferlin OS=Mus musculus OX=10090 GN=Otof PE=2 SV=1; Otoferlin OS=Mus musculus OX=10090 GN=Otof PE=4 SV=1; Rab7 OS=Mus musculus OX=10090 GN=Rab7 PE=1 SV=1; Otoferlin OS=Mus musculus OX=10090 GN=Otof PE=4 SV=1; Otof protein OS=Mus musculus OX=10090 GN=Otof PE=2 SV=1; Isoform 2 of Otoferlin OS=Mus musculus OX=10090 GN=Otof; Otoferlin OS=Mus musculus OX=10090 GN=Otof PE=1 SV=1; Fer-1-like 6 (C. elegans) OS=Mus musculus OX=10090 GN=Fer1l6 PE=1 SV=1 0 2 2 0.0892 0 1 1 2 494.78561 988.56395 988.56248 1.49 0.00074 0/0 0 0 46703380 HCD 30 MS2 30.13502 752.6 18.516 62.4632 18231 18231 18228 QEplus033719.raw F4 732.8 639.3 905.4 637.6 759.7 841 315 2.13 1 FALSE 0.002056 0.03654 0.188 -250 84802 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GELPGTK [R].gELPGTk.[Y] N-Term(TMT6plex); K7(TMT6plex) 3 Q5SX75 Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha2 PE=1 SV=1 Q5SX75; Q60716; Q5SX74 Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha2 PE=1 SV=1; Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus OX=10090 GN=P4ha2 PE=1 SV=1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha2 PE=2 SV=1 0 2 2 0.22 0 1 1 1 580.35803 1159.70879 1159.70869 0.08 0.00005 0/0 0 0 18947180 HCD 30 MS2 17.30488 1293.1 110 62.4657 18232 18232 18228 QEplus033719.raw F4 1430.1 990.6 1269.8 1217 1553 1298 397 2 1 FALSE 0.0008718 0.01194 0.374 -250 84809 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AANIVGEGEPR [R].aANIVGEGEPR.[E] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.6584 0 1 1 1 671.3703 1341.73332 1341.73239 0.69 0.00046 0/0 0 0 15011133 HCD 30 MS2 0 580.5 110 62.4683 18233 18233 18228 QEplus033719.raw F4 685.5 217.1 433.3 1040.5 242.1 864.7 261 3.63 2 FALSE 1.14E-05 3.28E-09 1.709 -250 84813 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAADFATHGK [R].aAADFATHGk.[L] N-Term(TMT6plex); K10(TMT6plex) 4 Q8VDP3 [F-actin]-monooxygenase MICAL1 OS=Mus musculus OX=10090 GN=Mical1 PE=1 SV=1 Q8VDP3-3; Q8VDP3-2; Q8VDP3; E9PUI4 Isoform 3 of [F-actin]-monooxygenase MICAL1 OS=Mus musculus OX=10090 GN=Mical1; Isoform 2 of [F-actin]-monooxygenase MICAL1 OS=Mus musculus OX=10090 GN=Mical1; [F-actin]-monooxygenase MICAL1 OS=Mus musculus OX=10090 GN=Mical1 PE=1 SV=1; F-actin monooxygenase OS=Mus musculus OX=10090 GN=Mical1 PE=1 SV=1 0 3 3 0.5956 0 1 1 1 482.94229 1446.81232 1446.81053 1.23 0.0006 0/0 0 0 9290596 HCD 30 MS2 36.03996 855.1 110 62.4707 18234 18234 18228 QEplus033719.raw F4 1013.8 758.5 869.8 694.5 1006.6 787.7 420 4.08 1 FALSE 1.14E-05 2.52E-06 1.161 -250 84821 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIGVKPPR [K].aIGVkPPR.[G] N-Term(TMT6plex); K5(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 0 2 2 0.3711 0 1 1 1 648.43195 1295.85661 1295.85636 0.2 0.00013 0/0 0 0 6850565 HCD 30 MS2 25.54635 616.4 110 62.4733 18235 18235 18228 QEplus033719.raw F4 566.4 528.7 704.3 539.8 667.6 691.4 27 2.91 1 FALSE 0.002141 0.03999 0.175 -250 84886 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDISIR [K].eDISIR.[LV] N-Term(TMT6plex) 1 Q99MX0 Transketolase-like protein 1 OS=Mus musculus OX=10090 GN=Tktl1 PE=1 SV=2 0 2 2 0.1136 0 1 1 3 481.28018 961.55309 961.55158 1.57 0.00076 0/0 0 0 11315169 HCD 30 MS2 47.87947 1372.2 110 62.5 18245 18245 18239 QEplus033719.raw F4 1588.4 1188.2 1450.5 1115.6 1601.8 1288.5 200 2.2 1 FALSE 0.001607 0.02535 0.242 -250 84887 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDLSLR [K].eDLSLR.[LV] N-Term(TMT6plex) 2 Q9CQM9 Glutaredoxin-3 OS=Mus musculus OX=10090 GN=Glrx3 PE=1 SV=1 Q9CQM9; A0A1B0GS58 Glutaredoxin-3 OS=Mus musculus OX=10090 GN=Glrx3 PE=1 SV=1; Glutaredoxin-3 OS=Mus musculus OX=10090 GN=Glrx3 PE=1 SV=1 0 2 2 0.1136 0 1 2 2 481.28018 961.55309 961.55158 1.57 0.00076 0/0 0 0 11315169 HCD 30 MS2 47.87947 1372.2 110 62.5 18245 18245 18239 QEplus033719.raw F4 1588.4 1188.2 1450.5 1115.6 1601.8 1288.5 200 2.2 1 FALSE 0.001607 0.02535 0.242 -250 84893 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STPLSDTK [K].sTPLSDTk.[K] N-Term(TMT6plex); K8(TMT6plex) 3 B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 P14873; Q8CAI9; B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 0 2 2 0.5164 0 1 1 1 653.88635 1306.76543 1306.76185 2.74 0.00179 0/0 0 0 6665049 HCD 30 MS2 0 562.1 110 62.5025 18246 18246 18239 QEplus033719.raw F4 586 487.6 581.7 418 671.2 627.8 467 3.04 1 FALSE 0.0006035 0.008873 0.423 -250 84900 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALSGSSGYK [K].aLSGSSGYk.[F] N-Term(TMT6plex); K9(TMT6plex) 4 Q9D902 General transcription factor IIE subunit 2 OS=Mus musculus OX=10090 GN=Gtf2e2 PE=1 SV=2 Q9D902; Q3UIR2; Q9CWC4; A0A087WSE8 General transcription factor IIE subunit 2 OS=Mus musculus OX=10090 GN=Gtf2e2 PE=1 SV=2; Transcription initiation factor IIE subunit beta OS=Mus musculus OX=10090 GN=Gtf2e2 PE=2 SV=1; Transcription initiation factor IIE subunit beta OS=Mus musculus OX=10090 GN=Gtf2e2 PE=2 SV=1; General transcription factor IIE subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Gtf2e2 PE=1 SV=1 0 2 2 0.5404 0 1 1 1 664.38428 1327.76128 1327.76219 -0.68 -0.00045 0/0 0 0 5811976.5 HCD 30 MS2 21.57974 530.6 110 62.505 18247 18247 18239 QEplus033719.raw F4 602.1 412.7 500.7 432.4 710.6 524.9 319 2.72 1 FALSE 1.14E-05 4.06E-06 1.122 -250 84910 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TISDQESFR [K].tISDQESFR.[Q] N-Term(TMT6plex) 2 F8VQB6 Unconventional myosin-X OS=Mus musculus OX=10090 GN=Myo10 PE=1 SV=1 F8VQB6; D3YXU7 Unconventional myosin-X OS=Mus musculus OX=10090 GN=Myo10 PE=1 SV=1; Unconventional myosin-X (Fragment) OS=Mus musculus OX=10090 GN=Myo10 PE=1 SV=1 0 2 2 0.5957 0 1 1 1 656.33862 1311.66997 1311.67421 -3.23 -0.00212 0/0 0 0 5454023 HCD 30 MS2 28.36356 493.6 110 62.5075 18248 18248 18239 QEplus033719.raw F4 518.8 340.4 484.4 450.6 577.5 589.9 144 3.24 1 FALSE 1.14E-05 3.32E-05 0.948 -250 84918 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGSMSAYEMR [K].sGSMSAYEMR.[M] N-Term(TMT6plex) 6 Q3UDG8 Calcium-activated neutral proteinase 1 OS=Mus musculus OX=10090 GN=Capn1 PE=2 SV=1 Q3UDG8; Q3UF24; Q8C2J1; Q80Y25; Q3TI07; Q3TB79 Calcium-activated neutral proteinase 1 OS=Mus musculus OX=10090 GN=Capn1 PE=2 SV=1; Calcium-activated neutral proteinase 1 (Fragment) OS=Mus musculus OX=10090 GN=Capn1 PE=2 SV=1; Calcium-activated neutral proteinase 1 OS=Mus musculus OX=10090 GN=Capn1 PE=2 SV=1; Calcium-activated neutral proteinase 1 OS=Mus musculus OX=10090 GN=Capn1 PE=2 SV=1; Calcium-activated neutral proteinase 1 OS=Mus musculus OX=10090 GN=Capn1 PE=1 SV=1; Calcium-activated neutral proteinase 1 (Fragment) OS=Mus musculus OX=10090 GN=Capn1 PE=2 SV=1 0 2 2 0.7888 0 1 1 1 674.31567 1347.62407 1347.62344 0.47 0.00032 0/0 0 0 5153566 HCD 30 MS2 16.81973 500.5 110 62.51 18249 18249 18239 QEplus033719.raw F4 512.6 379.3 525 515.5 513.1 557.7 29 3.22 1 FALSE 1.14E-05 4.89E-06 1.107 -250 84936 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TITSSYYR [R].tITSSYYR.[G] N-Term(TMT6plex) 9 Q0PD67; Q9D1G1 Rab1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1;Ras-related protein Rab-1B OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1 Q0PD67; Q3UB66; A0A494BBL7; Q9D1G1; A0A494B945; Q5SW88; Q6ZPF0; Q3V3C2; A0A494BA38 "Rab1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab1a PE=2 SV=1; Ras-related protein Rab-1B OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1; Ras-related protein Rab-1B OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1; Ras-related protein Rab-1B (Fragment) OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1; RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; MKIAA3012 protein (Fragment) OS=Mus musculus OX=10090 GN=Rab1a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab1b PE=2 SV=1; Ras-related protein Rab-1B OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1" 0 2 2 0.674 0 1 1 1 610.32977 1219.65227 1219.65202 0.21 0.00013 0/0 0 0 96481040 HCD 30 MS2 44.17455 1185.5 20.065 62.5221 18253 18253 18250 QEplus033719.raw F4 1147.3 984.8 1231.3 966.6 1652 1130.7 272 2.27 2 FALSE 1.14E-05 0.0004664 0.728 -250 84942 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMGLYGER [K].nMGLYGER.[V] N-Term(TMT6plex) 1 P05202 "Aspartate aminotransferase, mitochondrial OS=Mus musculus OX=10090 GN=Got2 PE=1 SV=1" P05202 "Aspartate aminotransferase, mitochondrial OS=Mus musculus OX=10090 GN=Got2 PE=1 SV=1" 0 2 2 0.6076 0 1 1 1 584.8031 1168.59892 1168.59821 0.61 0.00036 0/0 0 0 66433432 HCD 30 MS2 34.25296 996.6 25.075 62.5244 18254 18254 18250 QEplus033719.raw F4 937 796.3 1115.8 1120.7 961.2 1048.3 108 2.88 1 FALSE 1.14E-05 0.0005255 0.718 -250 84951 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNEWGK [K].tNEWGk.[T] N-Term(TMT6plex); K6(TMT6plex) 5 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q91VL4; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Col1a2 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.475 0 1 1 1 596.84076 1192.67424 1192.67264 1.34 0.0008 0/0 0 0 50127700 HCD 30 MS2 15.21706 1065.1 32.009 62.5267 18255 18255 18250 QEplus033719.raw F4 1049.2 830.1 1059.6 1009.3 1415.8 1026.9 379 2.4 1 FALSE 0.003742 0.07124 0.084 -250 84959 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSYNVR [R].lSYNVR.[E] N-Term(TMT6plex) 2 Q3TWW8 Serine/arginine-rich splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1 A0A0A6YXX6; Q3TWW8 Serine/arginine-rich-splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1; Serine/arginine-rich splicing factor 6 OS=Mus musculus OX=10090 GN=Srsf6 PE=1 SV=1 0 2 2 0.2 0 1 1 1 490.79077 980.57427 980.57265 1.65 0.00081 0/0 0 0 36666668 HCD 30 MS2 15.4068 788.1 34.525 62.5289 18256 18256 18250 QEplus033719.raw F4 652.6 856.5 949.1 560.4 898.8 811.4 97 2.25 1 FALSE 0.004181 0.07648 0.071 -250 84969 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVQAMK [K].dVQAMk.[A] N-Term(TMT6plex); K6(TMT6plex) 5 P62814 "V-type proton ATPase subunit B, brain isoform OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=1 SV=1" P62814; A0A1S6GWG6; Q91YH6; B0LAC8; Q99KA3 "V-type proton ATPase subunit B, brain isoform OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=1 SV=1; Vacuolar proton pump subunit B OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=2 SV=1; V-type proton ATPase subunit B, kidney isoform OS=Mus musculus OX=10090 GN=Atp6v1b1 PE=1 SV=1; ATPase H+ transporting lysosomal V1 subunit B2 (Fragment) OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=2 SV=1; Vacuolar proton pump subunit B (Fragment) OS=Mus musculus OX=10090 GN=Atp6v1b1 PE=2 SV=1" 0 2 2 0.4416 0 1 1 1 575.33899 1149.6707 1149.6702 0.44 0.00025 0/0 0 0 28209852 HCD 30 MS2 22.24207 1471.4 74.105 62.5312 18257 18257 18250 QEplus033719.raw F4 1587.6 1099.6 1564.2 1420.3 1582.6 1574.1 262 2.31 1 FALSE 0.004089 0.07535 0.074 -250 84989 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VESDVGPK [R].vESDVGPk.[E] N-Term(TMT6plex); K8(TMT6plex) 3 E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.5552 0 1 1 1 644.87952 1288.75176 1288.75129 0.36 0.00023 0/0 0 0 19811324 HCD 30 MS2 40.3636 1381.1 90.759 62.538 18260 18260 18250 QEplus033719.raw F4 1385.2 1269.8 1631.9 1314.9 1169.6 1515.4 476 2.81 1 FALSE 1.14E-05 0.0001823 0.807 -250 85020 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YVDEASKK [K].yVDEASkk.[E] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 3 Q641N3 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 Q641N3; P14131; Q5CZY9 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1; 40S ribosomal protein S16 OS=Mus musculus OX=10090 GN=Rps16 PE=1 SV=4; Rps16 protein OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 1 3 3 0.5198 0 1 1 1 542.99469 1626.96952 1626.96698 1.56 0.00084 0/0 0 0 39303564 HCD 30 MS2 29.54042 1388.6 40.676 62.5524 18265 18265 18261 QEplus033719.raw F4 1487.6 1103.9 1521.1 1435.8 1515.2 1267.8 312 2.52 1 FALSE 9.73E-05 0.002981 0.559 -250 85031 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDYRETVFR [R].sDYRETVFR.[L] N-Term(TMT6plex) 3 Q9EST5 Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Mus musculus OX=10090 GN=Anp32b PE=1 SV=1 Q9EST5; Q3UW32; Q9EST5-2 Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Mus musculus OX=10090 GN=Anp32b PE=1 SV=1; LRRcap domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Anp32b PE=2 SV=1; Isoform 2 of Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Mus musculus OX=10090 GN=Anp32b 1 3 3 0.563 0 1 1 1 467.91565 1401.73239 1401.73239 0 0 0/0 0 0 15177269 HCD 30 MS2 31.38914 989.1 86.729 62.5569 18267 18267 18261 QEplus033719.raw F4 976 691.2 1008.1 743.7 1001.7 1514 211 2.54 1 FALSE 0.001615 0.0263 0.236 -250 85038 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QYLPHVAR [K].qYLPHVAR.[L] N-Term(TMT6plex) 4 Q64310 Surfeit locus protein 4 OS=Mus musculus OX=10090 GN=Surf4 PE=1 SV=1 Q64310; E0CXD9; Q3U7E6; F7CH13 Surfeit locus protein 4 OS=Mus musculus OX=10090 GN=Surf4 PE=1 SV=1; Surfeit locus protein 4 OS=Mus musculus OX=10090 GN=Surf4 PE=1 SV=1; Surfeit locus protein 4 OS=Mus musculus OX=10090 GN=Surf4 PE=2 SV=1; Surfeit locus protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Surf4 PE=1 SV=1 0 3 3 0.5651 0 1 1 1 404.90616 1212.70392 1212.70506 -0.94 -0.00038 0/0 0 0 9121445 HCD 30 MS2 22.08313 582 105.528 62.5593 18268 18268 18261 QEplus033719.raw F4 522.3 528.5 687.5 500.4 551.6 701.6 267 3.15 1 FALSE 5.44E-05 0.001776 0.61 -250 85047 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVCDIPPR [K].tAVcDIPPR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 9 Q7TMM9; P99024; P68372; Q9CWF2 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1 Q7TMM9; Q9D6F9; Q62363; Q80ZV2; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2 "Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Beta-tubulin gene M-beta-2, 3' end (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1" 0 2 2 0.6624 0 1 1 1 629.34399 1257.68071 1257.68227 -1.24 -0.00078 0/0 0 0 42084116 HCD 30 MS2 56.9249 1101.3 40.693 62.5616 18269 18269 18261 QEplus033719.raw F4 1218.3 710.4 1082.7 763.3 1365.8 1467.4 217 2.34 4 FALSE 0.0032 0.06304 0.106 -250 85066 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSENPNEVFR [R].sSENPNEVFR.[F] N-Term(TMT6plex) 2 P56399 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 P56399; Q3U4W8 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 0 2 2 0.4191 0 1 1 1 704.35809 1407.70891 1407.70657 1.66 0.00117 0/0 0 0 28227872 HCD 30 MS2 3.001381 606.8 65.803 62.5661 18271 18271 18261 QEplus033719.raw F4 605.1 541.7 682 540.5 633.8 637.6 201 3.77 1 FALSE 1.14E-05 1.77E-07 1.38 -250 85075 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIQLAR [K].dIQLAR.[R] N-Term(TMT6plex) 8 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 0 2 2 0.1818 0 1 1 1 472.79016 944.57305 944.57265 0.42 0.0002 0/0 0 0 213476576 HCD 30 MS2 5.772493 532.2 6.369 62.5734 18273 18273 18272 QEplus033719.raw F4 447.8 599.9 577.5 323.4 790.5 454.1 249 2.42 2 FALSE 0.004305 0.07883 0.065 -250 85127 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIAITHHVK [K].eIAITHHVk.[E] N-Term(TMT6plex); K9(TMT6plex) 8 A7E215 Non-specific serine/threonine protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Rps6ka3 PE=2 SV=1 B1AXN8; B1AXN7; F6UG16; A7E215; B1AXN5; B1AXN9; B1AXP0; P18654 Ribosomal protein S6 kinase alpha-3 (Fragment) OS=Mus musculus OX=10090 GN=Rps6ka3 PE=1 SV=1; Ribosomal protein S6 kinase alpha-3 (Fragment) OS=Mus musculus OX=10090 GN=Rps6ka3 PE=4 SV=8; Ribosomal protein S6 kinase alpha-3 (Fragment) OS=Mus musculus OX=10090 GN=Rps6ka3 PE=1 SV=1; Non-specific serine/threonine protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Rps6ka3 PE=2 SV=1; Ribosomal protein S6 kinase alpha-3 (Fragment) OS=Mus musculus OX=10090 GN=Rps6ka3 PE=1 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Rps6ka3 PE=1 SV=1; Ribosomal protein S6 kinase alpha-3 (Fragment) OS=Mus musculus OX=10090 GN=Rps6ka3 PE=1 SV=1; Ribosomal protein S6 kinase alpha-3 OS=Mus musculus OX=10090 GN=Rps6ka3 PE=1 SV=2 0 4 4 0.5685 0 1 1 1 377.23602 1505.92226 1505.92042 1.22 0.00046 0/0 0 0 9535979 HCD 30 MS2 44.4594 474.7 110 62.5904 18280 18280 18272 QEplus033719.raw F4 459.4 374.7 524.3 390 517.2 582.5 515 3.43 1 FALSE 1.14E-05 3.56E-06 1.133 -250 85154 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTTHPLAK [K].vTTHPLAk.[D] N-Term(TMT6plex); K8(TMT6plex) 3 Q99LX0 Parkinson disease protein 7 homolog OS=Mus musculus OX=10090 GN=Park7 PE=1 SV=1 Q99LX0; A2A815; A2A813 Parkinson disease protein 7 homolog OS=Mus musculus OX=10090 GN=Park7 PE=1 SV=1; Maillard deglycase (Fragment) OS=Mus musculus OX=10090 GN=Park7 PE=1 SV=8; Maillard deglycase OS=Mus musculus OX=10090 GN=Park7 PE=1 SV=1 0 3 3 0.2867 0 1 1 1 442.28326 1324.83524 1324.83529 -0.04 -0.00002 0/0 0 0 48814964 HCD 30 MS2 3.953198 498 25.871 62.6097 18287 18287 18283 QEplus033719.raw F4 544.6 429.2 525.6 442.9 546.3 499.5 158 2.93 1 FALSE 0.001456 0.02096 0.273 -250 85204 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMMSAYER [R].sMMSAYER.[S] N-Term(TMT6plex) 7 H9KV00 Protein SON OS=Mus musculus OX=10090 GN=Son PE=1 SV=1 Q9QX47-3; Q9QX47-4; H9KV15; Q9QX47; H9KV01; Q9QX47-2; H9KV00 Isoform 3 of Protein SON OS=Mus musculus OX=10090 GN=Son; Isoform 4 of Protein SON OS=Mus musculus OX=10090 GN=Son; Protein SON OS=Mus musculus OX=10090 GN=Son PE=1 SV=1; Protein SON OS=Mus musculus OX=10090 GN=Son PE=1 SV=2; Protein SON OS=Mus musculus OX=10090 GN=Son PE=1 SV=1; Isoform 2 of Protein SON OS=Mus musculus OX=10090 GN=Son; Protein SON OS=Mus musculus OX=10090 GN=Son PE=1 SV=1 0 2 2 0.6224 0 1 1 1 602.28912 1203.57097 1203.56995 0.85 0.00051 0/0 0 0 11620921 HCD 30 MS2 60.03773 1278.3 110 62.6241 18293 18293 18283 QEplus033719.raw F4 1300.6 1177.9 1423.3 1028.1 1490.1 1249.9 39 2.41 1 FALSE 3.35E-05 0.001143 0.65 -250 85211 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVTNNLK [K].tVTNNLk.[S] N-Term(TMT6plex); K7(TMT6plex) 11 G5E8R1 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 E9Q455; G5E8R1; Q8BSH3; E9Q452; F8WID5; E9Q454; G5E8R0; Q564G1; B7ZNL3; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 0 2 2 0.4305 0 1 1 1 624.38971 1247.77214 1247.77236 -0.17 -0.00011 0/0 0 0 10024728 HCD 30 MS2 7.519453 883.1 110 62.6314 18295 18295 18294 QEplus033719.raw F4 1043.6 697.6 898.2 768.9 981.4 908.8 387 2.95 1 FALSE 0.0002814 0.005664 0.486 -250 85220 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQSGNINAAK [K].vQSGNINAAk.[TI] N-Term(TMT6plex); K10(TMT6plex) 5 Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 Q3UJP4; E9Q133; Q3U0I3; Q9R1U1; Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; Chaperonin containing TCP-1 gamma subunit (Fragment) OS=Mus musculus OX=10090 GN=Cctg PE=4 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 0 2 2 0.5263 0 1 1 1 730.43488 1459.86247 1459.8633 -0.56 -0.00041 0/0 0 0 8249009.5 HCD 30 MS2 0 351 110 62.634 18296 18296 18294 QEplus033719.raw F4 393.9 296 392.2 272.7 371.3 379.6 453 3.99 1 FALSE 1.14E-05 9.21E-09 1.624 -250 85230 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FKYDDAER [K].fkYDDAER.[R] N-Term(TMT6plex); K2(TMT6plex) 14 Q91VK2; Q80T06 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1;Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1 Q8BW50; Q91VK2; P57776-2; D3Z7N2; F6ZFU0; Q80T06; A0A0R4J1E2; D3YY68; E9QN08; A0A0R4J1L2; D3YZT9; P57776-3; P57776; D3YUQ9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Eef1d PE=2 SV=1; Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 2 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 3 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=3; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=8 1 3 3 0.2039 0 1 1 1 501.27341 1501.80567 1501.80511 0.37 0.00018 0/0 0 0 38324128 HCD 30 MS2 34.77384 1256.3 46.531 62.6362 18297 18297 18294 QEplus033719.raw F4 1176.9 1130.1 1452.7 1136.6 1170.9 1470.5 304 2.06 2 FALSE 0.00812 0.1369 -0.07 -250 85251 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDAISEEK [R].tDAISEEk.[L] N-Term(TMT6plex); K8(TMT6plex) 3 Q99JZ4 GTP-binding protein SAR1a OS=Mus musculus OX=10090 GN=Sar1a PE=1 SV=1 Q3TXJ4; Q99JZ4; P36536 Uncharacterized protein OS=Mus musculus OX=10090 GN=Sar1a PE=2 SV=1; GTP-binding protein SAR1a OS=Mus musculus OX=10090 GN=Sar1a PE=1 SV=1; GTP-binding protein SAR1a OS=Mus musculus OX=10090 GN=Sar1a PE=1 SV=1 0 2 2 0.5079 0 1 1 1 675.87878 1350.75029 1350.75168 -1.03 -0.00069 0/0 0 0 6895963.5 HCD 30 MS2 17.05173 557.7 110 62.6435 18300 18300 18294 QEplus033719.raw F4 592.1 467.6 573.5 477.2 632.9 602.9 369 3.17 1 FALSE 1.14E-05 7.38E-05 0.882 -250 85269 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEPGNLAGVR [R].aEPGNLAGVR.[H] N-Term(TMT6plex) 6 Q9R061 Cytosolic Fe-S cluster assembly factor NUBP2 OS=Mus musculus OX=10090 GN=Nubp2 PE=1 SV=1 A0A3Q4EGA7; Q9R061; A0A3Q4EIH1; A0A3Q4L2S1; A0A3Q4EGU9; A0A3Q4EC31 Cytosolic Fe-S cluster assembly factor NUBP2 OS=Mus musculus OX=10090 GN=Nubp2 PE=1 SV=1; Cytosolic Fe-S cluster assembly factor NUBP2 OS=Mus musculus OX=10090 GN=Nubp2 PE=1 SV=1; Cytosolic Fe-S cluster assembly factor NUBP2 OS=Mus musculus OX=10090 GN=Nubp2 PE=1 SV=1; Cytosolic Fe-S cluster assembly factor NUBP2 OS=Mus musculus OX=10090 GN=Nubp2 PE=1 SV=1; Cytosolic Fe-S cluster assembly factor NUBP2 OS=Mus musculus OX=10090 GN=Nubp2 PE=1 SV=1; Cytosolic Fe-S cluster assembly factor NUBP2 OS=Mus musculus OX=10090 GN=Nubp2 PE=1 SV=1 0 2 2 0.1222 0 1 1 1 606.85211 1212.69695 1212.6898 5.89 0.00357 0/0 0 0 4660841.5 HCD 30 MS2 37.89323 711.2 110 62.6535 18304 18304 18294 QEplus033719.raw F4 702.8 618.7 763.5 655.2 755 772.2 282 2.21 1 FALSE 0.004816 0.08419 0.05 -250 85278 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSYVGDEAQSK [KR].dSYVGDEAQSk.[RT] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; Q8CF71; P63268; Q61274; V9GXQ2; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Predicted gene 17087 OS=Mus musculus OX=10090 GN=Gm17087 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 4 4 0.5977 0 1 1 1 414.96771 1656.84902 1656.8481 0.55 0.00023 0/0 0 0 15555780 HCD 30 MS2 24.75342 458.1 52.596 62.663 18307 18307 18305 QEplus033719.raw F4 456.2 348.7 520.6 399.7 475.2 548.3 231 3.53 4 FALSE 1.14E-05 6.98E-05 0.887 -250 85286 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVHLEGK [K].aAVHLEGk.[I] N-Term(TMT6plex); K8(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 3 3 0.497 0 1 1 1 428.26807 1282.78965 1282.78834 1.02 0.00043 0/0 0 0 34023248 HCD 30 MS2 33.77618 584.8 40.651 62.6653 18308 18308 18305 QEplus033719.raw F4 629.1 484.2 637.6 461.3 596.1 700.6 203 3.28 1 FALSE 5.44E-05 0.002104 0.594 -250 85296 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALEEERPSLR [R].aLEEERPSLR.[I] N-Term(TMT6plex) 3 A0A1B0GSG5 Ribonuclease inhibitor OS=Mus musculus OX=10090 GN=Rnh1 PE=1 SV=1 A0A1B0GSG5; Q91VI7; Q3UM23 Ribonuclease inhibitor OS=Mus musculus OX=10090 GN=Rnh1 PE=1 SV=1; Ribonuclease inhibitor OS=Mus musculus OX=10090 GN=Rnh1 PE=1 SV=1; Ribonuclease inhibitor OS=Mus musculus OX=10090 GN=Rnh1 PE=2 SV=1 0 3 3 0.61 0 1 1 1 476.93848 1428.80088 1428.80081 0.05 0.00002 0/0 0 0 21040446 HCD 30 MS2 24.70876 890.7 74.198 62.6698 18310 18310 18305 QEplus033719.raw F4 1214.6 575.8 821.9 999.1 847.2 885.5 349 3.41 1 FALSE 1.14E-05 4.21E-06 1.119 -250 85311 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLEGEEER [K].lLEGEEER.[L] N-Term(TMT6plex) 8 P48678; P14733; A0A0R4J0Q5 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2;Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3;Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1 P48678; P14733; P48678-2; Q3V159; P48678-3; Q8C553; A0A0R4J0Q5; P21619 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lmnb2 PE=2 SV=1; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; IF rod domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Lmnb1 PE=2 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=2 0 2 2 0.4156 0 1 1 1 602.32416 1203.64104 1203.64185 -0.67 -0.0004 0/0 0 0 35174608 HCD 30 MS2 35.83828 763.8 30.014 62.6744 18312 18312 18305 QEplus033719.raw F4 789.3 720.6 858 622.4 877.4 715.2 203 3.2 3 FALSE 1.14E-05 0.0004784 0.726 -250 85325 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEPGNLAGVR [R].aEPGNLAGVR.[H] N-Term(TMT6plex) 6 Q9R061 Cytosolic Fe-S cluster assembly factor NUBP2 OS=Mus musculus OX=10090 GN=Nubp2 PE=1 SV=1 A0A3Q4EGA7; Q9R061; A0A3Q4EIH1; A0A3Q4L2S1; A0A3Q4EGU9; A0A3Q4EC31 Cytosolic Fe-S cluster assembly factor NUBP2 OS=Mus musculus OX=10090 GN=Nubp2 PE=1 SV=1; Cytosolic Fe-S cluster assembly factor NUBP2 OS=Mus musculus OX=10090 GN=Nubp2 PE=1 SV=1; Cytosolic Fe-S cluster assembly factor NUBP2 OS=Mus musculus OX=10090 GN=Nubp2 PE=1 SV=1; Cytosolic Fe-S cluster assembly factor NUBP2 OS=Mus musculus OX=10090 GN=Nubp2 PE=1 SV=1; Cytosolic Fe-S cluster assembly factor NUBP2 OS=Mus musculus OX=10090 GN=Nubp2 PE=1 SV=1; Cytosolic Fe-S cluster assembly factor NUBP2 OS=Mus musculus OX=10090 GN=Nubp2 PE=1 SV=1 0 2 2 0.4574 0 1 1 1 606.84814 1212.68901 1212.6898 -0.65 -0.00039 0/0 0 0 5533190 HCD 30 MS2 35.71957 675.5 110 62.6794 18314 18314 18305 QEplus033719.raw F4 641.4 582.7 736.3 622.1 727.8 742.7 232 2.23 1 FALSE 0.007188 0.1128 -0.026 -250 85334 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSMTQLESSTSR [K].sSMTQLESSTSR.[M] N-Term(TMT6plex) 8 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; Q8C139; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1; Q9CTL3 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1 0 2 2 0.6433 0 1 1 1 771.88599 1542.7647 1542.7631 1.03 0.0008 0/0 0 0 4607787.5 HCD 30 MS2 20.29505 242.9 110 62.6819 18315 18315 18305 QEplus033719.raw F4 253.3 113.7 227.4 349.8 171.8 341.3 125 3.56 2 FALSE 1.14E-05 2.57E-10 1.919 -250 85351 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMENYEK [R].eMENYEk.[I] N-Term(TMT6plex); K7(TMT6plex) 5 Q7TMY4 THO complex subunit 7 homolog OS=Mus musculus OX=10090 GN=Thoc7 PE=1 SV=2 Q7TMY4; A0A286YEA7; A0A286YCS0; A0A286YDT0; Q7TMY4-2 THO complex subunit 7 homolog OS=Mus musculus OX=10090 GN=Thoc7 PE=1 SV=2; THO complex subunit 7 homolog (Fragment) OS=Mus musculus OX=10090 GN=Thoc7 PE=1 SV=1; THO complex subunit 7 homolog OS=Mus musculus OX=10090 GN=Thoc7 PE=1 SV=1; THO complex subunit 7 homolog (Fragment) OS=Mus musculus OX=10090 GN=Thoc7 PE=1 SV=1; Isoform 2 of THO complex subunit 7 homolog OS=Mus musculus OX=10090 GN=Thoc7 0 2 2 0.5588 0 1 1 1 700.86115 1400.71501 1400.71319 1.3 0.00091 0/0 0 0 3422143 HCD 30 MS2 0 339.5 110 62.6918 18318 18318 18316 QEplus033719.raw F4 334.8 322.2 368.9 258 400.8 352.3 174 3.06 1 FALSE 0.000262 0.005257 0.495 -250 85357 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVSGIK [R].eVSGIk.[AT] N-Term(TMT6plex); K6(TMT6plex) 5 P48678; A0A0R4J0Q5 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2;Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1 D3YUF7; P48678; P48678-2; A0A0R4J0Q5; P21619 Prelamin-A/C (Fragment) OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=1; Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=2 0 2 2 0.1058 0 1 1 2 545.84796 1090.68865 1090.68723 1.3 0.00071 0/0 0 0 25988792 HCD 30 MS2 22.17336 1568.4 89.377 62.694 18319 18319 18316 QEplus033719.raw F4 2072.5 1226.8 1505.4 1364.6 1965.6 1275.4 200 2.08 2 FALSE 0.008943 0.1596 -0.098 -250 85363 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQAEQAALK [R].aQAEQAALk.[Q] N-Term(TMT6plex); K9(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.464 0 1 1 1 694.41785 1387.82842 1387.83094 -1.81 -0.00126 0/0 0 0 8531640 HCD 30 MS2 0 618.1 110 62.6965 18320 18320 18316 QEplus033719.raw F4 617.7 496.4 661.6 594.8 639.2 698.9 475 2.5 2 FALSE 1.14E-05 1.17E-05 1.035 -250 85379 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTDQASMPDNTAAQK [R].nTDQASMPDNTAAQk.[V] N-Term(TMT6plex); K15(TMT6plex) 7 Q69ZX3; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; A0A2R8VHF9; A0A338P6K2; O08638-2; O08638; Q8VDD5; E9QPE7 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2 0 4 4 0.7136 0 1 1 1 513.26282 2050.02944 2050.02754 0.93 0.00048 0/0 0 0 15554736 HCD 30 MS2 38.72167 625.4 78.577 62.701 18322 18322 18316 QEplus033719.raw F4 606.6 545.4 701.1 482.3 792.7 624.1 201 4.05 2 FALSE 1.14E-05 1.31E-07 1.405 -250 85386 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIMTQNVER [K].nIMTQNVER.[I] N-Term(TMT6plex) 2 A0A0R4J0R1 Vesicle-associated membrane protein 8 OS=Mus musculus OX=10090 GN=Vamp8 PE=1 SV=1 A0A0R4J0R1; O70404 Vesicle-associated membrane protein 8 OS=Mus musculus OX=10090 GN=Vamp8 PE=1 SV=1; Vesicle-associated membrane protein 8 OS=Mus musculus OX=10090 GN=Vamp8 PE=1 SV=1 0 2 2 0.6526 0 1 1 1 667.35876 1333.71025 1333.70955 0.53 0.00035 0/0 0 0 10392502 HCD 30 MS2 50.93134 752.3 110 62.7036 18323 18323 18316 QEplus033719.raw F4 734.1 588.8 844.2 707.3 807.7 832 295 3.31 1 FALSE 1.14E-05 2.52E-05 0.971 -250 85402 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATQVGEKPPKDESASEESEAR [K].aTQVGEkPPkDESASEESEAR.[L] N-Term(TMT6plex); K7(TMT6plex); K10(TMT6plex) 1 P70460 Vasodilator-stimulated phosphoprotein OS=Mus musculus OX=10090 GN=Vasp PE=1 SV=4 P70460 Vasodilator-stimulated phosphoprotein OS=Mus musculus OX=10090 GN=Vasp PE=1 SV=4 1 4 4 0.7426 0 1 1 1 733.8924 2932.54775 2932.54667 0.37 0.00027 0/0 0 0 5987995 HCD 30 MS2 0 183.5 110 62.7083 18325 18325 18316 QEplus033719.raw F4 180.7 142.5 231.7 160.4 162.4 223.2 454 4.04 1 FALSE 1.14E-05 4.93E-12 2.245 -250 85407 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FKYDDAER [K].fkYDDAER.[R] N-Term(TMT6plex); K2(TMT6plex) 14 Q91VK2; Q80T06 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1;Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1 Q8BW50; Q91VK2; P57776-2; D3Z7N2; F6ZFU0; Q80T06; A0A0R4J1E2; D3YY68; E9QN08; A0A0R4J1L2; D3YZT9; P57776-3; P57776; D3YUQ9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Eef1d PE=2 SV=1; Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 2 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 3 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=3; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=8 1 2 2 0.4663 0 1 1 1 751.40747 1501.80766 1501.80511 1.7 0.00128 0/0 0 0 5140020.5 HCD 30 MS2 0 299.5 110 62.7109 18326 18326 18316 QEplus033719.raw F4 284.9 259.4 345.5 284.8 295.5 327.2 300 2.08 2 FALSE 4.43E-05 0.001439 0.629 -250 85413 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DETNYGIPQR [R].dETNYGIPQR.[A] N-Term(TMT6plex) 1 P68040 Receptor of activated protein C kinase 1 OS=Mus musculus OX=10090 GN=Rack1 PE=1 SV=3 P68040 Receptor of activated protein C kinase 1 OS=Mus musculus OX=10090 GN=Rack1 PE=1 SV=3 0 2 2 0.6815 0 1 1 1 711.36389 1421.72051 1421.72222 -1.21 -0.00086 0/0 0 0 11009508 HCD 30 MS2 43.81585 645.6 64.624 62.7182 18328 18328 18327 QEplus033719.raw F4 604.3 581.7 752.5 503.9 722.6 708.9 204 2.7 1 FALSE 1.14E-05 2.46E-06 1.163 -250 85417 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGCTDINECEIGAHNCGR [K].tGcTDINEcEIGAHNcGR.[H] N-Term(TMT6plex); C3(Carbamidomethyl); C9(Carbamidomethyl); C16(Carbamidomethyl) 2 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 0 3 3 0.916 0 1 1 1 765.00269 2292.9935 2292.99571 -0.96 -0.00074 0/0 0 0 11941743 HCD 30 MS2 0 108.5 110 62.7207 18329 18329 18327 QEplus033719.raw F4 116.5 79.9 127.2 124.2 84.8 118.5 18 9.05 1 FALSE 1.14E-05 6.31E-16 4.281 -250 85423 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVLEQER [K].mVLEQER.[L] N-Term(TMT6plex) 1 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 0 2 2 0.3962 0 1 1 1 567.31305 1133.61882 1133.61861 0.19 0.00011 0/0 0 0 39920540 HCD 30 MS2 26.67706 822.1 29.238 62.723 18330 18330 18327 QEplus033719.raw F4 846.3 566.6 913.9 837.8 736 1032.2 273 2.6 1 FALSE 0.0007626 0.01067 0.394 -250 85432 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THINYGVK [R].tHINYGVk.[G] N-Term(TMT6plex); K8(TMT6plex) 2 Q8BMS1 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1" Q8BMS1; Q3TB39 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1; 3HCDH_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hadha PE=2 SV=1" 0 3 3 0.622 0 1 1 1 463.94696 1389.82633 1389.82546 0.63 0.00029 0/0 0 0 31752982 HCD 30 MS2 15.35089 937.4 42.273 62.7252 18331 18331 18327 QEplus033719.raw F4 967.8 739.3 1033.5 915 938.8 1029.8 474 2.46 1 FALSE 0.0005848 0.008714 0.426 -250 85460 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MCKDEDECAEGKHDCTEK [R].mckDEDEcAEGkHDcTEk.[Q] N-Term(TMT6plex); C2(Carbamidomethyl); K3(TMT6plex); C8(Carbamidomethyl); K12(TMT6plex); C15(Carbamidomethyl); K18(TMT6plex) 2 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 2 5 5 0.6273 0 1 1 1 632.50665 3158.50416 3158.50326 0.29 0.00018 0/0 0 0 11490092 HCD 30 MS2 26.03168 567 110 62.7347 18335 18335 18327 QEplus033719.raw F4 548.5 398.6 713.3 759.6 325 657 157 4.91 1 FALSE 1.14E-05 2.42E-08 1.544 -250 85465 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGIEVHAGDK [K].dGIEVHAGDk.[Y] N-Term(TMT6plex); K10(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.6145 0 1 1 1 500.28043 1498.82672 1498.82658 0.1 0.00005 0/0 0 0 12485318 HCD 30 MS2 15.90376 773.2 110 62.7372 18336 18336 18327 QEplus033719.raw F4 892.2 450.4 754.7 866.9 580.8 1093.9 329 3.45 2 FALSE 1.14E-05 2.53E-06 1.161 -250 85512 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RADLLK [K].rADLLk.[A] N-Term(TMT6plex); K6(TMT6plex) 2 P46935 E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus OX=10090 GN=Nedd4 PE=1 SV=3 P46935; A0A571BDN7 E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus OX=10090 GN=Nedd4 PE=1 SV=3; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Nedd4 PE=1 SV=1 1 3 3 0.0187 0 1 1 1 391.92896 1173.77231 1173.77196 0.3 0.00012 0/0 0 0 8335418.5 HCD 30 MS2 47.01745 602.7 110 62.7565 18343 18343 18338 QEplus033719.raw F4 580 585.1 721 387.4 795.3 547.3 376 2.67 1 FALSE 0.002421 0.04817 0.148 -250 85520 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSMTQLESSTSR [K].sSMTQLESSTSR.[M] N-Term(TMT6plex) 8 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; Q8C139; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1; Q9CTL3 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1 0 2 2 0.7146 0 1 1 1 771.88574 1542.76421 1542.7631 0.72 0.00055 0/0 0 0 3582389.5 HCD 30 MS2 0 249.9 110 62.759 18344 18344 18338 QEplus033719.raw F4 261 113.7 218.1 385.2 159.5 361.6 130 4.24 2 FALSE 1.14E-05 1.72E-07 1.382 -250 85529 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SWSAQAK [R].sWSAQAk.[E] N-Term(TMT6plex); K7(TMT6plex) 4 A2AST1 Coiled-coil domain-containing 141 OS=Mus musculus OX=10090 GN=Ccdc141 PE=1 SV=1 Q8BUK9; J3QNK9; A2AST1; E9Q8Q6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ccdc141 PE=2 SV=1; Coiled-coil domain-containing 141 (Fragment) OS=Mus musculus OX=10090 GN=Ccdc141 PE=1 SV=1; Coiled-coil domain-containing 141 OS=Mus musculus OX=10090 GN=Ccdc141 PE=1 SV=1; Coiled-coil domain-containing 141 OS=Mus musculus OX=10090 GN=Ccdc141 PE=1 SV=2 0 2 2 0.3629 0 1 1 1 618.3609 1235.71453 1235.71484 -0.26 -0.00016 0/0 0 0 2915587.25 HCD 30 MS2 34.9541 552.3 110 62.7615 18345 18345 18338 QEplus033719.raw F4 575.8 433.3 585.3 596.4 523.2 600.1 500 2.48 1 FALSE 0.0002323 0.004728 0.508 -250 85538 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEATAERPGEAAVASSPSK [K].gEATAERPGEAAVASSPSk.[A] N-Term(TMT6plex); K19(TMT6plex) 3 P26645 Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2 A0A0A1HAM8; P26645; Q05BL6 80K protein OS=Mus musculus OX=10090 GN=Marcks PE=2 SV=1; Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2; Marcks protein (Fragment) OS=Mus musculus OX=10090 GN=Marcks PE=2 SV=1 0 3 3 0.5954 0 1 1 1 758.40991 2273.21518 2273.21376 0.63 0.00047 0/0 0 0 9015938 HCD 30 MS2 0 477.4 110 62.764 18346 18346 18338 QEplus033719.raw F4 494.5 463.1 514.8 258.6 767 366.6 407 3.88 1 FALSE 1.14E-05 6.31E-16 3.386 -250 85553 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YVDEASKK [K].yVDEASkk.[E] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 3 Q641N3 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 Q641N3; P14131; Q5CZY9 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1; 40S ribosomal protein S16 OS=Mus musculus OX=10090 GN=Rps16 PE=1 SV=4; Rps16 protein OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 1 2 2 0.5418 0 1 1 1 813.9884 1626.96953 1626.96698 1.57 0.00127 0/0 0 0 5780104 HCD 30 MS2 14.17598 307.4 110 62.7691 18348 18348 18338 QEplus033719.raw F4 309.9 294.2 320 249.9 410.2 260.2 312 2.51 1 FALSE 0.001615 0.02604 0.238 -250 85559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSYVGDEAQSK [KR].dSYVGDEAQSk.[RT] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; Q8CF71; P63268; Q61274; V9GXQ2; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Predicted gene 17087 OS=Mus musculus OX=10090 GN=Gm17087 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 2 2 0.5563 0 1 1 1 828.92834 1656.84941 1656.8481 0.79 0.00066 0/0 0 0 1091351424 HCD 30 MS2 5.592199 684.2 2.311 62.7764 18350 18350 18349 QEplus033719.raw F4 621.8 569.4 757.9 628.8 754.8 772.6 231 4.62 4 FALSE 1.14E-05 3.05E-06 1.146 -250 85569 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIGVKPPR [K].aIGVkPPR.[G] N-Term(TMT6plex); K5(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 0 3 3 0.4618 0 1 1 1 432.62393 1295.85724 1295.85636 0.68 0.00029 0/0 0 0 215816592 HCD 30 MS2 9.030097 694.1 5.791 62.7787 18351 18351 18349 QEplus033719.raw F4 654 595.5 807.2 578.5 710.4 819.1 27 2.75 1 FALSE 0.001591 0.02466 0.246 -250 85576 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLNLSGNK [K].hLNLSGNk.[I] N-Term(TMT6plex); K8(TMT6plex) 5 O35381 Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 Q64G17; F6UFG6; D3YYE1; D3Z7M9; O35381 Putative acidic leucine-rich nuclear phosphoprotein 32 family member C OS=Mus musculus OX=10090 GN=Anp32c PE=2 SV=3; Acidic leucine-rich nuclear phosphoprotein 32 family member A (Fragment) OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A (Fragment) OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 0 3 3 0.5365 0 1 1 1 447.60815 1340.80991 1340.80505 3.62 0.00162 0/0 0 0 43228272 HCD 30 MS2 37.1673 718.5 17.365 62.7832 18353 18353 18349 QEplus033719.raw F4 802.1 538.8 689.5 437.7 1033.9 809.2 244 3.84 1 FALSE 0.0002019 0.004059 0.526 -250 85584 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CSTPEEIK [K].cSTPEEIk.[K] N-Term(TMT6plex); C1(Carbamidomethyl); K8(TMT6plex) 1 Q9R0P5 Destrin OS=Mus musculus OX=10090 GN=Dstn PE=1 SV=3 Q9R0P5 Destrin OS=Mus musculus OX=10090 GN=Dstn PE=1 SV=3 0 2 2 0.498 0 1 1 1 711.39215 1421.77703 1421.77104 4.21 0.00299 0/0 0 0 10544729 HCD 30 MS2 51.72962 674.6 100.241 62.7855 18354 18354 18349 QEplus033719.raw F4 656.8 601.6 780.5 531 789.1 688.7 355 2.47 1 FALSE 0.000565 0.008651 0.427 -250 85589 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVHLEGK [K].aAVHLEGk.[I] N-Term(TMT6plex); K8(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 2 2 0.65 0 1 1 1 641.89771 1282.78813 1282.78834 -0.16 -0.0001 0/0 0 0 6501430.5 HCD 30 MS2 34.43695 586.5 110 62.788 18355 18355 18349 QEplus033719.raw F4 538.5 489 647 512.5 660 672.1 208 1.8 1 FALSE 5.44E-05 0.002058 0.596 -250 85599 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AINSALAQR [K].aINSALAQR.[V] N-Term(TMT6plex) 7 D3Z7S8 Transcription initiation factor IIA gamma chain (Fragment) OS=Mus musculus OX=10090 GN=Gtf2a2 PE=1 SV=1 D3Z7S8; D3Z7C2; D6RIQ7; Q3UT44; Q80ZM7; Q05C74; D3Z793 Transcription initiation factor IIA gamma chain (Fragment) OS=Mus musculus OX=10090 GN=Gtf2a2 PE=1 SV=1; Transcription initiation factor IIA gamma chain OS=Mus musculus OX=10090 GN=Gtf2a2 PE=1 SV=1; Transcription initiation factor IIA gamma chain OS=Mus musculus OX=10090 GN=Gtf2a2 PE=1 SV=1; Transcription initiation factor IIA gamma chain OS=Mus musculus OX=10090 GN=Gtf2a2 PE=2 SV=1; Transcription initiation factor IIA subunit 2 OS=Mus musculus OX=10090 GN=Gtf2a2 PE=1 SV=2; Transcription initiation factor IIA gamma chain OS=Mus musculus OX=10090 GN=Gtf2a2 PE=1 SV=1; Transcription initiation factor IIA gamma chain (Fragment) OS=Mus musculus OX=10090 GN=Gtf2a2 PE=1 SV=1 0 2 2 0.3962 0 1 1 1 586.85168 1172.69609 1172.69489 1.03 0.0006 0/0 0 0 3494143.75 HCD 30 MS2 47.04633 595.3 110 62.7906 18356 18356 18349 QEplus033719.raw F4 587.8 544.7 630.6 482.1 752.1 574.6 352 2.6 1 FALSE 1.14E-05 2.17E-06 1.173 -250 85609 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MKQEPVKPEEGR [K].mkQEPVkPEEGR.[D] N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex) 3 Q9QUI0 Transforming protein RhoA OS=Mus musculus OX=10090 GN=Rhoa PE=1 SV=1 Q9QUI0; Q3TN61; A0A0A6YXF6 Transforming protein RhoA OS=Mus musculus OX=10090 GN=Rhoa PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rhoa PE=2 SV=1; Transforming protein RhoA (Fragment) OS=Mus musculus OX=10090 GN=Rhoa PE=1 SV=1 1 4 4 0.6203 0 1 1 1 529.56097 2115.22207 2115.21992 1.01 0.00054 0/0 0 0 48411856 HCD 30 MS2 12.0345 718.7 32.236 62.7928 18357 18357 18349 QEplus033719.raw F4 670.8 697.5 838.5 536.6 840.5 728.2 413 3.45 1 FALSE 1.14E-05 7.23E-07 1.264 -250 85616 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVAEDDEDDDVDTKK [K].rVAEDDEDDDVDTkk.[Q] N-Term(TMT6plex); K14(TMT6plex); K15(TMT6plex) 6 Q8C2T3 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1 Q8C2T3; P26350; Q3U8X6; Q3U6E4; Q8CAQ5; Q3UA54 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Prothymosin alpha OS=Mus musculus OX=10090 GN=Ptma PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1 2 4 4 0.8356 0 1 1 1 610.07196 2437.26601 2437.26614 -0.05 -0.00003 0/0 0 0 16592491 HCD 30 MS2 11.01482 1117.5 68.68 62.7951 18358 18358 18349 QEplus033719.raw F4 1161.7 1305.8 1146.7 579.8 1692.3 818.8 394 5.23 1 FALSE 1.14E-05 4.68E-13 2.439 -250 85622 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REMDQTMAANAQK [K].rEMDQTMAANAQk.[N] N-Term(TMT6plex); K13(TMT6plex) 2 Q9DBP5 UMP-CMP kinase OS=Mus musculus OX=10090 GN=Cmpk1 PE=1 SV=1 Q9DBP5; A0A0R4J093 UMP-CMP kinase OS=Mus musculus OX=10090 GN=Cmpk1 PE=1 SV=1; UMP-CMP kinase OS=Mus musculus OX=10090 GN=Cmpk1 PE=1 SV=1 1 3 3 0.6741 0 1 1 1 651.34174 1952.01065 1952.00939 0.65 0.00042 0/0 0 0 9685811 HCD 30 MS2 25.06377 402.3 110 62.7976 18359 18359 18349 QEplus033719.raw F4 383.6 343.1 461 326 456.2 443.9 309 4.94 1 FALSE 1.14E-05 2.26E-12 2.309 -250 85628 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIYGEK [RK].sIYGEk.[F] N-Term(TMT6plex); K6(TMT6plex) 5 Q3UAJ1 Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1 Q3TE63; Q3UAJ1; Q5SVY2; Q9CZK9; A0A1L1SST0 Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1 0 2 2 0.3013 0 1 1 1 577.84344 1154.67961 1154.68215 -2.19 -0.00127 0/0 0 0 9079627 HCD 30 MS2 0 1147 110 62.8049 18361 18361 18360 QEplus033719.raw F4 1188.6 975.1 1170.6 889 1492.8 1166.2 162 2.39 1 FALSE 0.008081 0.1357 -0.068 -250 85656 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILVQER [RK].iLVQER.[LK] N-Term(TMT6plex) 1 Q4VA29 "RNA transcription, translation and transport factor protein OS=Mus musculus OX=10090 GN=Rtraf PE=1 SV=1" Q4VA29 "RNA transcription, translation and transport factor protein OS=Mus musculus OX=10090 GN=Rtraf PE=1 SV=1" 0 2 2 0.0985 0 1 1 1 493.81375 986.62023 986.6196 0.64 0.00031 0/0 0 0 15643137 HCD 30 MS2 34.86713 1110.6 91.972 62.812 18364 18364 18360 QEplus033719.raw F4 975.6 771.5 1227.7 802.4 959.5 1926.8 196 2.03 1 FALSE 0.002981 0.05785 0.12 -250 85657 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLVQER [RK].lLVQER.[LK] N-Term(TMT6plex) 3 Q8K4E0; A0A1D5RMI8; Q8K4E0-2 Alstrom syndrome protein 1 homolog OS=Mus musculus OX=10090 GN=Alms1 PE=1 SV=2; Alstrom syndrome protein 1 homolog OS=Mus musculus OX=10090 GN=Alms1 PE=1 SV=1; Isoform 2 of Alstrom syndrome protein 1 homolog OS=Mus musculus OX=10090 GN=Alms1 0 2 2 0.0985 0 1 2 2 493.81375 986.62023 986.6196 0.64 0.00031 0/0 0 0 15643137 HCD 30 MS2 34.86713 1110.6 91.972 62.812 18364 18364 18360 QEplus033719.raw F4 975.6 771.5 1227.7 802.4 959.5 1926.8 196 2.03 1 FALSE 0.002981 0.05785 0.12 -250 85666 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAGGAVSTPAPGK [K].aAGGAVSTPAPGk.[K] N-Term(TMT6plex); K13(TMT6plex) 5 A0A286YDA2 Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1 A0A286YDA2; A0A286YDT3; A0A286YDV7; E9Q5C9; E9Q5C9-2 Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 (Fragment) OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Isoform 2 of Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 0 3 3 0.6735 0 1 1 1 514.64081 1541.90787 1541.90516 1.76 0.0009 0/0 0 0 5472996 HCD 30 MS2 16.03273 489.7 110 62.8145 18365 18365 18360 QEplus033719.raw F4 518.2 395.1 499.5 394.7 576.9 553.8 349 3.89 1 FALSE 1.14E-05 1.05E-08 1.613 -250 85673 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LREEAAMK [R].lREEAAMk.[A] N-Term(TMT6plex); K8(TMT6plex) 2 Q9D6U8 Protein FAM162A OS=Mus musculus OX=10090 GN=Fam162a PE=1 SV=1 A0A338P6X2; Q9D6U8 Protein FAM162A OS=Mus musculus OX=10090 GN=Fam162a PE=1 SV=1; Protein FAM162A OS=Mus musculus OX=10090 GN=Fam162a PE=1 SV=1 1 3 3 0.2667 0 1 1 1 469.27985 1405.82499 1405.82374 0.88 0.00041 0/0 0 0 38457992 HCD 30 MS2 47.52318 932.8 40.359 62.8167 18366 18366 18360 QEplus033719.raw F4 877.1 745.2 994.8 1062.5 886.9 1030 468 3.15 1 FALSE 1.14E-05 0.0005645 0.712 -250 85681 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALLQSSASRK [K].aLLQSSASRk.[T] N-Term(TMT6plex); K10(TMT6plex) 4 Q3TGU7 Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=1 Q3TGU7; Q05BN2; P50580-2; Q3UMW2 Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=1; Pa2g4 protein (Fragment) OS=Mus musculus OX=10090 GN=Pa2g4 PE=2 SV=1; Isoform 2 of Proliferation-associated protein 2G4 OS=Mus musculus OX=10090 GN=Pa2g4; Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=2 SV=1 1 3 3 0.5625 0 1 1 1 506.98413 1518.93784 1518.9368 0.69 0.00035 0/0 0 0 22180892 HCD 30 MS2 51.45242 1024.2 76.655 62.819 18367 18367 18360 QEplus033719.raw F4 1317.9 837 997.7 692.9 1391.3 908.4 356 3.84 1 FALSE 1.14E-05 3.01E-07 1.336 -250 85689 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTVEPQLEAR [K].gTVEPQLEAR.[G] N-Term(TMT6plex) 7 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; A0A668KLG7; B7FAV1; F6XC15; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.4753 0 1 1 1 664.87354 1328.73979 1328.73715 1.99 0.00132 0/0 0 0 9970099 HCD 30 MS2 10.279 624.3 110 62.8215 18368 18368 18360 QEplus033719.raw F4 666.1 533.3 645.2 476.4 791.5 633.1 326 3.64 1 FALSE 1.14E-05 2.09E-07 1.367 -250 85694 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPNLRPISR [K].kPNLRPISR.[S] N-Term(TMT6plex); K1(TMT6plex) 3 B9EJ37 SH3 and PX domains 2B OS=Mus musculus OX=10090 GN=Sh3pxd2b PE=2 SV=1 B9EJ37; A2AAY5; A0A5F8MPP7 SH3 and PX domains 2B OS=Mus musculus OX=10090 GN=Sh3pxd2b PE=2 SV=1; SH3 and PX domain-containing protein 2B OS=Mus musculus OX=10090 GN=Sh3pxd2b PE=1 SV=1; SH3 and PX domain-containing protein 2B OS=Mus musculus OX=10090 GN=Sh3pxd2b PE=1 SV=1 0 4 4 0.5191 0 1 1 1 385.50308 1538.9905 1538.9895 0.65 0.00025 0/0 0 0 8892174 HCD 30 MS2 37.24582 408.3 110 62.824 18369 18369 18360 QEplus033719.raw F4 394.8 330.1 489.9 285.9 515.2 434.1 106 2.35 1 FALSE 0.006801 0.1081 -0.015 -250 85716 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NANTFMSPQQR [R].nANTFMSPQQR.[W] N-Term(TMT6plex) 4 Q8VEK8 Matrix Gla protein (Fragment) OS=Mus musculus OX=10090 GN=Mgp PE=2 SV=1 Q8VEK8; P19788; Q3TVX6; Q6NSS4 Matrix Gla protein (Fragment) OS=Mus musculus OX=10090 GN=Mgp PE=2 SV=1; Matrix Gla protein OS=Mus musculus OX=10090 GN=Mgp PE=3 SV=1; Matrix Gla protein OS=Mus musculus OX=10090 GN=Mgp PE=2 SV=1; Matrix Gla protein OS=Mus musculus OX=10090 GN=Mgp PE=2 SV=1 0 2 2 0.7247 0 1 1 1 761.88507 1522.76286 1522.76338 -0.34 -0.00026 0/0 0 0 2778614 HCD 30 MS2 53.36684 257 110 62.8363 18373 18373 18371 QEplus033719.raw F4 270.4 281.6 269.2 179.1 311.7 229.8 164 3.85 1 FALSE 1.14E-05 5.58E-07 1.286 -250 85722 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDPSTIEK [R].dDPSTIEk.[L] N-Term(TMT6plex); K8(TMT6plex) 3 P60766 Cell division control protein 42 homolog OS=Mus musculus OX=10090 GN=Cdc42 PE=1 SV=2 P60766; P60766-1; Q3UL78 Cell division control protein 42 homolog OS=Mus musculus OX=10090 GN=Cdc42 PE=1 SV=2; Isoform 1 of Cell division control protein 42 homolog OS=Mus musculus OX=10090 GN=Cdc42; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cdc42 PE=2 SV=1 0 2 2 0.4733 0 1 1 1 681.87964 1362.752 1362.75168 0.23 0.00016 0/0 0 0 29924926 HCD 30 MS2 4.75303 947.7 75.922 62.8386 18374 18374 18371 QEplus033719.raw F4 868.8 836.1 1077.8 883 942.1 1078.4 428 2.81 1 FALSE 1.14E-05 0.0002919 0.768 -250 85731 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVTLHK [K].eVTLHk.[D] N-Term(TMT6plex); K6(TMT6plex) 2 Q9EPU0 Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 PE=1 SV=2 Q9EPU0; Q9EPU0-2 Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 PE=1 SV=2; Isoform 2 of Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 0 3 3 0.1888 0 1 1 1 395.58487 1184.74005 1184.74033 -0.23 -0.00009 0/0 0 0 11386797 HCD 30 MS2 56.76735 910.3 106.959 62.8433 18376 18376 18371 QEplus033719.raw F4 822 610.9 952.6 670.7 907 1498.5 220 2.49 1 FALSE 0.004757 0.08355 0.052 -250 85736 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLAPEVADR [K].gLAPEVADR.[I] N-Term(TMT6plex) 8 Q8C2D1; G5E823 "Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1;Histidine--tRNA ligase OS=Mus musculus OX=10090 GN=Hars2 PE=1 SV=1" Q3U890; Q8C2D1; G5E823; Q99KK9; Q61035; Q8VDX8; Q3UDH1; Q9D094 "Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase OS=Mus musculus OX=10090 GN=Hars2 PE=1 SV=1; Histidine--tRNA ligase, mitochondrial OS=Mus musculus OX=10090 GN=Hars2 PE=1 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars1 PE=1 SV=2; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1" 0 2 2 0.5475 0 1 1 1 578.82959 1156.6519 1156.65235 -0.39 -0.00022 0/0 0 0 9700147 HCD 30 MS2 38.6507 1191.7 92.388 62.8456 18377 18377 18371 QEplus033719.raw F4 1174.6 981.1 1370.4 1037.6 1361.9 1224.4 178 3.16 2 FALSE 6.52E-05 0.00267 0.57 -250 85744 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEVEDLCR [R].eEVEDLcR.[L] N-Term(TMT6plex); C7(Carbamidomethyl) 5 Q3TWN8 Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1 Q3TWN8; Q3UZ27; Q9Z110; Q9Z110-2; Q3UGW8 Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1; Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=1 SV=2; Isoform Short of Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1; Gamma-glutamyl kinase (Fragment) OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1 0 2 2 0.6358 0 1 1 1 639.8147 1278.62212 1278.61973 1.87 0.00119 0/0 0 0 5347538 HCD 30 MS2 15.93066 486 110 62.8481 18378 18378 18371 QEplus033719.raw F4 483.5 360.2 520 466.1 516 569.9 100 3.13 1 FALSE 3.35E-05 0.001401 0.632 -250 85749 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVTNNLK [K].tVTNNLk.[S] N-Term(TMT6plex); K7(TMT6plex) 11 G5E8R1 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 E9Q455; G5E8R1; Q8BSH3; E9Q452; F8WID5; E9Q454; G5E8R0; Q564G1; B7ZNL3; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 0 3 3 0.481 0 1 1 1 416.59583 1247.77292 1247.77236 0.45 0.00019 0/0 0 0 22985098 HCD 30 MS2 0 470.3 60.237 62.8503 18379 18379 18371 QEplus033719.raw F4 500.6 366 482.2 378.2 567.2 527.5 388 2.89 1 FALSE 0.002079 0.03902 0.178 -250 85759 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVAEDDEDDDVDTKK [K].rVAEDDEDDDVDTkk.[Q] N-Term(TMT6plex); K14(TMT6plex); K15(TMT6plex) 6 Q8C2T3 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1 Q8C2T3; P26350; Q3U8X6; Q3U6E4; Q8CAQ5; Q3UA54 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Prothymosin alpha OS=Mus musculus OX=10090 GN=Ptma PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1 2 3 3 0.7891 0 1 1 1 813.09387 2437.26706 2437.26614 0.38 0.00031 0/0 0 0 10587286 HCD 30 MS2 0 469.4 110 62.8529 18380 18380 18371 QEplus033719.raw F4 475.9 570.4 475.4 221.1 737.7 335.7 405 3.84 1 FALSE 1.14E-05 6.31E-16 3.899 -250 85773 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLNLSGNK [K].hLNLSGNk.[I] N-Term(TMT6plex); K8(TMT6plex) 5 O35381 Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 Q64G17; F6UFG6; D3YYE1; D3Z7M9; O35381 Putative acidic leucine-rich nuclear phosphoprotein 32 family member C OS=Mus musculus OX=10090 GN=Anp32c PE=2 SV=3; Acidic leucine-rich nuclear phosphoprotein 32 family member A (Fragment) OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A (Fragment) OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 0 2 2 0.5031 0 1 1 1 670.90552 1340.80376 1340.80505 -0.97 -0.00065 0/0 0 0 6047052 HCD 30 MS2 35.22087 673.6 110 62.8627 18383 18383 18382 QEplus033719.raw F4 708 605.7 708.9 521.5 832.1 665.2 290 3.26 1 FALSE 1.14E-05 0.0001254 0.838 -250 85807 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLAPEVADR [K].gLAPEVADR.[I] N-Term(TMT6plex) 8 Q8C2D1; G5E823 "Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1;Histidine--tRNA ligase OS=Mus musculus OX=10090 GN=Hars2 PE=1 SV=1" Q3U890; Q8C2D1; G5E823; Q99KK9; Q61035; Q8VDX8; Q3UDH1; Q9D094 "Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase OS=Mus musculus OX=10090 GN=Hars2 PE=1 SV=1; Histidine--tRNA ligase, mitochondrial OS=Mus musculus OX=10090 GN=Hars2 PE=1 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars1 PE=1 SV=2; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1" 0 2 2 0.5535 0 1 1 1 578.82666 1156.64604 1156.65235 -5.45 -0.00315 0/0 0 0 12270116 HCD 30 MS2 35.62525 1236.9 95.502 62.872 18387 18387 18382 QEplus033719.raw F4 1206.4 1040.5 1412.5 1050.2 1434.5 1277.5 181 3.18 2 FALSE 1.14E-05 6.47E-05 0.893 -250 85822 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAAPEETSTTPSPQK [K].tAAPEETSTTPSPQk.[I] N-Term(TMT6plex); K15(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 3 3 0.7949 0 1 1 1 668.36176 2003.07071 2003.06972 0.5 0.00033 0/0 0 0 18391724 HCD 30 MS2 13.99392 528.4 110 62.8795 18390 18390 18382 QEplus033719.raw F4 542.1 326.7 568 598 411.6 724.3 406 4.68 1 FALSE 1.14E-05 1.83E-11 2.137 -250 85829 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YLDIHER [K].yLDIHER.[M] N-Term(TMT6plex) 1 P62073 Mitochondrial import inner membrane translocase subunit Tim10 OS=Mus musculus OX=10090 GN=Timm10 PE=1 SV=1 P62073 Mitochondrial import inner membrane translocase subunit Tim10 OS=Mus musculus OX=10090 GN=Timm10 PE=1 SV=1 0 3 3 0.6875 0 1 1 1 392.21857 1174.64115 1174.64179 -0.55 -0.00021 0/0 0 0 8490725 HCD 30 MS2 82.88255 845.4 68.398 62.8818 18391 18391 18382 QEplus033719.raw F4 826.6 785.9 1020 515.3 1135.7 788.8 255 2.08 1 FALSE 0.0006574 0.01001 0.404 -250 85841 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSYVGDEAQSK [KR].dSYVGDEAQSk.[RT] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; Q8CF71; P63268; Q61274; V9GXQ2; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Predicted gene 17087 OS=Mus musculus OX=10090 GN=Gm17087 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 3 3 0.7279 0 1 1 1 552.95544 1656.85178 1656.8481 2.22 0.00123 0/0 0 0 1425426048 HCD 30 MS2 4.04195 478 1.236 62.8916 18394 18394 18393 QEplus033719.raw F4 433.3 371.3 557.8 446 545.2 514.2 242 4.19 4 FALSE 1.14E-05 5.00E-07 1.294 -250 85857 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVVDPGK [K].dVVDPGk.[V] N-Term(TMT6plex); K7(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.1921 0 1 1 1 594.35602 1187.70476 1187.70361 0.97 0.00058 0/0 0 0 15560387 HCD 30 MS2 41.7773 1254.8 103.309 62.8985 18397 18397 18393 QEplus033719.raw F4 1205.3 702.2 1350.7 1374.8 1106.5 1789.3 362 2.29 1 FALSE 0.001074 0.01379 0.348 -250 85874 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDNSSLTGESEPQTR [K].vDNSSLTGESEPQTR.[S] N-Term(TMT6plex) 11 Q8VDN2 Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1 A0A0G2JGX4; E9QNX7; Q3TXF9; Q8VDN2; Q6ZQ49; Q8VCE0; Q64436; Q6PIC6; D3YYN7; Q3UHK5; Q91WH7 Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a3 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp4a PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a2 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a3 PE=1 SV=1; Potassium-transporting ATPase alpha chain 1 OS=Mus musculus OX=10090 GN=Atp4a PE=1 SV=3; Sodium/potassium-transporting ATPase subunit alpha-3 OS=Mus musculus OX=10090 GN=Atp1a3 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a2 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a2 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp4a PE=1 SV=1 0 2 2 0.7505 0 1 1 1 924.96051 1848.91374 1848.91367 0.04 0.00004 0/0 0 0 7618757 HCD 30 MS2 0 272.5 110 62.9035 18399 18399 18393 QEplus033719.raw F4 266 209.2 331.7 281.9 212 334 166 5.45 1 FALSE 1.14E-05 7.19E-16 2.975 -250 85879 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLNLSGNK [K].hLNLSGNk.[I] N-Term(TMT6plex); K8(TMT6plex) 5 O35381 Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 Q64G17; F6UFG6; D3YYE1; D3Z7M9; O35381 Putative acidic leucine-rich nuclear phosphoprotein 32 family member C OS=Mus musculus OX=10090 GN=Anp32c PE=2 SV=3; Acidic leucine-rich nuclear phosphoprotein 32 family member A (Fragment) OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A (Fragment) OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 0 2 2 0.472 0 1 1 1 670.90601 1340.80474 1340.80505 -0.24 -0.00016 0/0 0 0 5567900.5 HCD 30 MS2 22.76516 813.9 110 62.9061 18400 18400 18393 QEplus033719.raw F4 848.6 740.2 876.5 683.2 939.7 795.1 292 2.5 1 FALSE 0.0001187 0.003163 0.553 -250 85888 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CSVNISNQAVR [K].cSVNISNQAVR.[I] N-Term(TMT6plex); C1(Carbamidomethyl) 3 Q8R1G6 PDZ and LIM domain protein 2 OS=Mus musculus OX=10090 GN=Pdlim2 PE=1 SV=1 Q8R1G6; A0A087WPL1; F7C957 PDZ and LIM domain protein 2 OS=Mus musculus OX=10090 GN=Pdlim2 PE=1 SV=1; PDZ and LIM domain protein 2 OS=Mus musculus OX=10090 GN=Pdlim2 PE=1 SV=1; PDZ and LIM domain protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pdlim2 PE=1 SV=1 0 2 2 0.7365 0 1 1 1 738.8941 1476.78093 1476.77903 1.29 0.00095 0/0 0 0 5744172.5 HCD 30 MS2 0 242.2 110 62.9086 18401 18401 18393 QEplus033719.raw F4 227.7 238.8 305.9 188.2 239.1 253.6 311 4.44 1 FALSE 1.14E-05 1.11E-10 1.988 -250 85908 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FPNQNQTK [R].fPNQNQTk.[N] N-Term(TMT6plex); K8(TMT6plex) 1 P56391 Cytochrome c oxidase subunit 6B1 OS=Mus musculus OX=10090 GN=Cox6b1 PE=1 SV=2 P56391 Cytochrome c oxidase subunit 6B1 OS=Mus musculus OX=10090 GN=Cox6b1 PE=1 SV=2 0 2 2 0.3497 0 1 1 1 717.91028 1434.81328 1434.81053 1.91 0.00137 0/0 0 0 16997356 HCD 30 MS2 5.992961 659.4 110 62.9205 18405 18405 18404 QEplus033719.raw F4 727.7 438.4 657.1 770.9 547.8 814.5 470 2.86 1 FALSE 0.0001707 0.003914 0.53 -250 85916 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTDQASMPDNTAAQK [R].nTDQASMPDNTAAQk.[V] N-Term(TMT6plex); K15(TMT6plex) 7 Q69ZX3; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; A0A2R8VHF9; A0A338P6K2; O08638-2; O08638; Q8VDD5; E9QPE7 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2 0 3 3 0.751 0 1 1 1 684.01447 2050.02884 2050.02754 0.64 0.00043 0/0 0 0 6093763.5 HCD 30 MS2 20.56236 240.7 110 62.923 18406 18406 18404 QEplus033719.raw F4 226.6 228.8 279.6 200.8 264.3 244.2 200 4.9 2 FALSE 1.14E-05 3.23E-11 2.09 -250 85921 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDVDIRK [K].cDVDIRk.[D] N-Term(TMT6plex); C1(Carbamidomethyl); K7(TMT6plex) 23 O89054; Q3UAF6 Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q8BFZ3; Q3UCF8; Q3TSB7; Q9QZ83; O89054; Q3UAF6; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; F8WGM8; Q99NC5; Q3TIJ9; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P63260; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 1 3 3 0.5288 0 1 1 1 455.26419 1363.77802 1363.77679 0.9 0.00041 0/0 0 0 30400922 HCD 30 MS2 25.46572 733.9 37.553 62.9253 18407 18407 18404 QEplus033719.raw F4 685.7 685.4 805.4 530.1 1000 696.6 460 2.08 2 FALSE 0.007496 0.1224 -0.047 -250 85928 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVAEDDEDDDVDTKK [K].rVAEDDEDDDVDTkk.[Q] N-Term(TMT6plex); K14(TMT6plex); K15(TMT6plex) 6 Q8C2T3 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1 Q8C2T3; P26350; Q3U8X6; Q3U6E4; Q8CAQ5; Q3UA54 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Prothymosin alpha OS=Mus musculus OX=10090 GN=Ptma PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1 2 5 5 0.7766 0 1 1 1 488.25946 2437.2682 2437.26614 0.84 0.00041 0/0 0 0 35753824 HCD 30 MS2 38.49183 716.8 26 62.9275 18408 18408 18404 QEplus033719.raw F4 704.9 713 716.3 539.1 955.8 671.4 410 3.76 1 FALSE 1.14E-05 1.92E-06 1.183 -250 85934 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAAGIPGGK [R].gAAGIPGGk.[G] N-Term(TMT6plex); K9(TMT6plex) 4 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.4844 0 1 1 1 593.37219 1185.73711 1185.73558 1.29 0.00076 0/0 0 0 10281281 HCD 30 MS2 50.51786 868.9 110 62.9301 18409 18409 18404 QEplus033719.raw F4 807.4 756.6 935.6 637.6 1107.7 968.3 245 2.56 1 FALSE 1.14E-05 0.0004998 0.722 -250 85944 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDTYVTDNGDGTYR [K].tDTYVTDNGDGTYR.[V] N-Term(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.792 0 1 1 1 903.92145 1806.83562 1806.83435 0.7 0.00063 0/0 0 0 8946568 HCD 30 MS2 0 327.7 110 62.9326 18410 18410 18404 QEplus033719.raw F4 348 151.3 371.4 436.2 160 499.3 32 4.52 1 FALSE 1.14E-05 3.60E-13 2.461 -250 85958 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASDIPSSDAK [K].aSDIPSSDAk.[S] N-Term(TMT6plex); K10(TMT6plex) 2 Q9EP71 Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1 Q9EP71; A0A2I3BPY7 Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1; Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1 0 2 2 0.6628 0 1 1 1 724.90442 1448.80156 1448.79969 1.29 0.00093 0/0 0 0 4949401.5 HCD 30 MS2 0 342.4 110 62.9376 18412 18412 18404 QEplus033719.raw F4 320.4 363 390.7 263.2 395 322 445 3.44 1 FALSE 1.14E-05 2.92E-08 1.529 -250 85969 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAAPEETSTTPSPQK [K].tAAPEETSTTPSPQk.[I] N-Term(TMT6plex); K15(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 2 2 0.8014 0 1 1 1 1002.03796 2003.06865 2003.06972 -0.53 -0.00053 0/0 0 0 2702965.25 HCD 30 MS2 0 199.5 110 62.9427 18414 18414 18404 QEplus033719.raw F4 222.9 33.6 194.5 318.9 34.7 392.5 392 4.28 1 FALSE 1.14E-05 2.71E-11 2.105 -250 85976 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLETENAGLR [R].sLETENAGLR.[L] N-Term(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 D3YUF7; P48678; P48678-2 Prelamin-A/C (Fragment) OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=1; Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 0 2 2 0.6146 0 1 1 1 659.86206 1318.71684 1318.71641 0.33 0.00022 0/0 0 0 143708064 HCD 30 MS2 3.795942 658.7 15.152 62.95 18416 18416 18415 QEplus033719.raw F4 670.5 577.7 717.2 500.9 825.1 661 315 4.1 1 FALSE 1.14E-05 0.0001904 0.803 -250 85991 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLAECIR [R].kLAEcIR.[W] N-Term(TMT6plex); K1(TMT6plex); C5(Carbamidomethyl) 1 Q8BGH2 Sorting and assembly machinery component 50 homolog OS=Mus musculus OX=10090 GN=Samm50 PE=1 SV=1 Q8BGH2 Sorting and assembly machinery component 50 homolog OS=Mus musculus OX=10090 GN=Samm50 PE=1 SV=1 1 3 3 0.3632 0 1 1 1 449.94446 1347.81882 1347.81826 0.41 0.00019 0/0 0 0 8820450 HCD 30 MS2 42.27401 723.6 110 62.9547 18418 18418 18415 QEplus033719.raw F4 1052 474.7 638.6 771.4 767.1 638 418 1.9 1 FALSE 0.0023 0.04538 0.156 -250 85999 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDNSSLTGESEPQTR [K].vDNSSLTGESEPQTR.[S] N-Term(TMT6plex) 11 Q8VDN2 Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1 A0A0G2JGX4; E9QNX7; Q3TXF9; Q8VDN2; Q6ZQ49; Q8VCE0; Q64436; Q6PIC6; D3YYN7; Q3UHK5; Q91WH7 Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a3 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp4a PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a2 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a3 PE=1 SV=1; Potassium-transporting ATPase alpha chain 1 OS=Mus musculus OX=10090 GN=Atp4a PE=1 SV=3; Sodium/potassium-transporting ATPase subunit alpha-3 OS=Mus musculus OX=10090 GN=Atp1a3 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a2 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a2 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp4a PE=1 SV=1 0 3 3 0.7334 0 1 1 1 616.97583 1848.91294 1848.91367 -0.39 -0.00024 0/0 0 0 18500670 HCD 30 MS2 9.516497 394.5 102.939 62.9571 18419 18419 18415 QEplus033719.raw F4 388.5 350.3 441.3 316 450.8 420.3 165 5.74 1 FALSE 1.14E-05 4.82E-11 2.057 -250 86006 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGLGQGVQGDAGPR [R].gGGLGQGVQGDAGPR.[R] N-Term(TMT6plex) 1 Q3U046 WW domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Yap1 PE=2 SV=1 Q3U046 WW domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Yap1 PE=2 SV=1 0 2 2 0.368 0 1 1 1 777.91437 1554.82146 1554.81858 1.85 0.00144 0/0 0 0 5334246.5 HCD 30 MS2 16.54365 220.3 110 62.9597 18420 18420 18415 QEplus033719.raw F4 218.7 184.3 268.1 182.9 223.1 244.6 264 3.75 1 FALSE 1.14E-05 1.45E-05 1.017 -250 86019 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVAEDDEDDDVDTKK [K].rVAEDDEDDDVDTkk.[Q] N-Term(TMT6plex); K14(TMT6plex); K15(TMT6plex) 6 Q8C2T3 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1 Q8C2T3; P26350; Q3U8X6; Q3U6E4; Q8CAQ5; Q3UA54 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Prothymosin alpha OS=Mus musculus OX=10090 GN=Ptma PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1 2 2 2 0.8516 0 1 1 1 1219.13831 2437.26933 2437.26614 1.31 0.0016 0/0 0 0 3782481.75 HCD 30 MS2 0 123.8 110 62.9647 18422 18422 18415 QEplus033719.raw F4 117.3 142.7 121.8 55 223.3 82.8 409 4.92 1 FALSE 1.14E-05 6.31E-16 3.028 -250 86024 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEATAERPGEAAVASSPSK [K].gEATAERPGEAAVASSPSk.[A] N-Term(TMT6plex); K19(TMT6plex) 3 P26645 Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2 A0A0A1HAM8; P26645; Q05BL6 80K protein OS=Mus musculus OX=10090 GN=Marcks PE=2 SV=1; Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2; Marcks protein (Fragment) OS=Mus musculus OX=10090 GN=Marcks PE=2 SV=1 0 2 2 0.5959 0 1 1 1 1137.11157 2273.21587 2273.21376 0.93 0.00105 0/0 0 0 2781957 HCD 30 MS2 0 102.2 110 62.9673 18423 18423 18415 QEplus033719.raw F4 91.5 91.1 115.8 57.8 184.8 71.9 412 4.9 1 FALSE 1.14E-05 2.44E-14 2.683 -250 86035 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KDWDDDQND [K].kDWDDDQND.[-] N-Term(TMT6plex); K1(TMT6plex) 7 Q6A0F1 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1 Q8BVY8; Q3UKQ2; Q9CRW7; Q6A0F1; H3BL49; P42932; Q9WVS5 CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1; T-complex protein 1 subunit theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=3; CCT-theta OS=Mus musculus OX=10090 GN=Cctq PE=3 SV=1 1 2 2 0.7351 0 1 1 1 804.88129 1608.7553 1608.7542 0.68 0.00055 0/0 0 0 2715225.5 HCD 30 MS2 0 307.4 110 62.9723 18425 18425 18415 QEplus033719.raw F4 299.1 292.3 361.5 282.2 275 334.3 55 1.85 1 FALSE 0.007148 0.1124 -0.025 -250 86043 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAESSPFVER [K].eAESSPFVER.[L] N-Term(TMT6plex) 6 Q3UBU0 HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1 Q3TUD6; Q3UBU0; Q91V38; Q8CCY5; F7C312; P08113 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Heat shock protein 90, beta (Grp94), member 1 OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Endoplasmin (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=1; Endoplasmin OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=2" 0 2 2 0.4263 0 1 1 1 690.35443 1379.70159 1379.70043 0.84 0.00058 0/0 0 0 65358820 HCD 30 MS2 4.262338 540.5 27.824 62.9796 18427 18427 18426 QEplus033719.raw F4 522.8 515.5 589.4 429.5 669.1 516.4 188 3.12 1 FALSE 1.14E-05 7.92E-07 1.257 -250 86056 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEGGTTVTVK [K].tEGGTTVTVk.[D] N-Term(TMT6plex); K10(TMT6plex) 4 Q5SX40 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1 Q5SX40; B2RWX0; Q1WNQ6; Q8BLW0 "Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-1 (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1" 0 2 2 0.504 0 1 1 1 725.92957 1450.85185 1450.85173 0.09 0.00006 0/0 0 0 7334203 HCD 30 MS2 38.23856 641.4 110 62.9846 18429 18429 18426 QEplus033719.raw F4 759.3 324.8 543.8 1078.8 329.7 812.2 398 3.77 1 FALSE 1.14E-05 1.06E-08 1.612 -250 86063 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVTEQGAELSNEER [K].sVTEQGAELSNEER.[N] N-Term(TMT6plex) 5 P63101 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 A0A2I3BQ03; Q8BWN0; D3YXN6; D3YXF4; P63101 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; 14_3_3 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=8; 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 0 2 2 0.7066 0 1 1 1 889.44196 1777.87663 1777.87655 0.05 0.00004 0/0 0 0 6271090.5 HCD 30 MS2 0 349.2 110 62.9872 18430 18430 18426 QEplus033719.raw F4 356 342.2 396.3 258.6 385.1 356.8 142 5.59 1 FALSE 1.14E-05 1.09E-13 2.559 -250 86081 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRELWVQR [R].dRELWVQR.[L] N-Term(TMT6plex) 2 Q9CR09 Ubiquitin-fold modifier-conjugating enzyme 1 OS=Mus musculus OX=10090 GN=Ufc1 PE=1 SV=1 Q9CR09; M0QWS4 Ubiquitin-fold modifier-conjugating enzyme 1 OS=Mus musculus OX=10090 GN=Ufc1 PE=1 SV=1; Ubiquitin-fold modifier-conjugating enzyme 1 OS=Mus musculus OX=10090 GN=Ufc1 PE=1 SV=1 1 3 3 0.4221 0 1 1 1 444.25357 1330.74616 1330.7429 2.45 0.00109 0/0 0 0 8381942.5 HCD 30 MS2 81.7755 878.1 96.53 62.9919 18432 18432 18426 QEplus033719.raw F4 1123.1 729.4 889.5 647.4 925.5 953.7 367 3.08 1 FALSE 5.44E-05 0.002427 0.58 -250 86123 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAGGAVSTPAPGK [K].aAGGAVSTPAPGk.[K] N-Term(TMT6plex); K13(TMT6plex) 5 A0A286YDA2 Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1 A0A286YDA2; A0A286YDT3; A0A286YDV7; E9Q5C9; E9Q5C9-2 Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 (Fragment) OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Isoform 2 of Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 0 2 2 0.7283 0 1 1 1 771.45825 1541.90923 1541.90516 2.64 0.00203 0/0 0 0 4760822.5 HCD 30 MS2 13.77493 333.9 110 63.0119 18439 18439 18437 QEplus033719.raw F4 345.5 275.4 377.7 254.8 384.8 365.4 348 4.38 1 FALSE 1.14E-05 1.53E-12 2.341 -250 86128 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVTEQGAELSNEER [K].sVTEQGAELSNEER.[N] N-Term(TMT6plex) 5 P63101 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 A0A2I3BQ03; Q8BWN0; D3YXN6; D3YXF4; P63101 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; 14_3_3 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=8; 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 0 3 3 0.7093 0 1 1 1 593.29871 1777.88156 1777.87655 2.82 0.00167 0/0 0 0 49783660 HCD 30 MS2 21.58876 333.1 43.753 63.0141 18440 18440 18437 QEplus033719.raw F4 325.1 290.4 372.6 261.9 393.6 355 158 5.71 1 FALSE 1.14E-05 1.13E-09 1.797 -250 86135 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVTEQGAELSNEER [K].aVTEQGAELSNEER.[N] N-Term(TMT6plex) 2 P68254 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq PE=1 SV=1 P68254; P68254-2 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq PE=1 SV=1; Isoform 2 of 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq 0 3 3 0.7595 0 1 1 1 587.966 1761.88346 1761.88164 1.03 0.00061 0/0 0 0 10715513 HCD 30 MS2 12.25786 447.8 110 63.0166 18441 18441 18437 QEplus033719.raw F4 435.1 363.1 487 385.6 474.6 541.5 198 6.07 1 FALSE 1.14E-05 1.49E-09 1.774 -250 86142 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVTEQGAELSNEER [K].aVTEQGAELSNEER.[N] N-Term(TMT6plex) 2 P68254 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq PE=1 SV=1 P68254; P68254-2 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq PE=1 SV=1; Isoform 2 of 14-3-3 protein theta OS=Mus musculus OX=10090 GN=Ywhaq 0 2 2 0.7595 0 1 1 1 881.44537 1761.88347 1761.88164 1.04 0.00092 0/0 0 0 11266717 HCD 30 MS2 0 474.2 110 63.0191 18442 18442 18437 QEplus033719.raw F4 446.8 407.8 511.3 403 545.6 531 198 5.82 1 FALSE 1.14E-05 1.34E-15 2.922 -250 86150 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGLGQGVQGDAGPR [R].gGGLGQGVQGDAGPR.[R] N-Term(TMT6plex) 1 Q3U046 WW domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Yap1 PE=2 SV=1 Q3U046 WW domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Yap1 PE=2 SV=1 0 3 3 0.2 0 1 1 1 518.94507 1554.82065 1554.81858 1.33 0.00069 0/0 0 0 11135146 HCD 30 MS2 52.20666 1263.6 110 63.0216 18443 18443 18437 QEplus033719.raw F4 1279.4 775.7 1310.1 1529.3 1010 1677 268 2.1 1 FALSE 0.001607 0.02557 0.241 -250 86178 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASLAETDK [K].aSLAETDk.[I] N-Term(TMT6plex); K8(TMT6plex) 1 P50516 V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a PE=1 SV=2 P50516 V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a PE=1 SV=2 0 2 2 0.4568 0 1 1 1 646.87695 1292.74663 1292.7462 0.33 0.00021 0/0 0 0 12054514 HCD 30 MS2 48.66392 1177.3 110 63.0315 18447 18447 18437 QEplus033719.raw F4 1160.1 939.7 1268.7 1024.8 1341.7 1328.6 424 2.78 1 FALSE 1.14E-05 0.0003034 0.764 -250 86194 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEGGTTVTVK [K].tEGGTTVTVk.[D] N-Term(TMT6plex); K10(TMT6plex) 4 Q5SX40 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1 Q5SX40; B2RWX0; Q1WNQ6; Q8BLW0 "Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-1 (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1" 0 3 3 0.4476 0 1 1 1 484.28967 1450.85447 1450.85173 1.89 0.00091 0/0 0 0 10889659 HCD 30 MS2 16.87841 735 110 63.0413 18450 18450 18448 QEplus033719.raw F4 820.4 439.2 603.9 972.8 625.5 947.9 437 3.15 1 FALSE 1.14E-05 0.0004467 0.732 -250 86202 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STPLSDTK [K].sTPLSDTk.[K] N-Term(TMT6plex); K8(TMT6plex) 3 B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 P14873; Q8CAI9; B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 0 2 2 0.4612 0 1 1 1 653.88501 1306.76274 1306.76185 0.68 0.00045 0/0 0 0 9658515 HCD 30 MS2 58.27017 787.3 110 63.0438 18451 18451 18448 QEplus033719.raw F4 772 647.1 860.9 665.1 885.9 892.8 428 2.58 1 FALSE 0.0001707 0.00387 0.531 -250 86229 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIQVQHPAAK [R].eIQVQHPAAk.[S] N-Term(TMT6plex); K10(TMT6plex) 4 Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 Q3UJP4; Q3U0I3; Q3TBM6; Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 0 3 3 0.5413 0 1 1 1 526.98438 1578.93857 1578.9368 1.12 0.00059 0/0 0 0 14581882 HCD 30 MS2 47.96373 1005.9 110 63.0538 18455 18455 18448 QEplus033719.raw F4 1066 836.9 1095.6 848.9 1130.9 1057.3 459 3.51 1 FALSE 1.14E-05 3.96E-06 1.124 -250 86242 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KDWDDDQND [K].kDWDDDQND.[-] N-Term(TMT6plex); K1(TMT6plex) 7 Q6A0F1 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1 Q8BVY8; Q3UKQ2; Q9CRW7; Q6A0F1; H3BL49; P42932; Q9WVS5 CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1; T-complex protein 1 subunit theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=3; CCT-theta OS=Mus musculus OX=10090 GN=Cctq PE=3 SV=1 1 3 3 0.6077 0 1 1 1 536.92365 1608.75638 1608.7542 1.36 0.00073 0/0 0 0 8606822 HCD 30 MS2 54.54808 745.8 110 63.0588 18457 18457 18448 QEplus033719.raw F4 759.7 663.9 793 637.8 849.6 770.7 59 2.6 1 FALSE 0.0009633 0.01306 0.358 -250 86249 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YQDGVPK [K].yQDGVPk.[I] N-Term(TMT6plex); K7(TMT6plex) 2 Q9WVJ3 Carboxypeptidase Q OS=Mus musculus OX=10090 GN=Cpq PE=1 SV=1 Q3U496; Q9WVJ3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Cpq PE=2 SV=1; Carboxypeptidase Q OS=Mus musculus OX=10090 GN=Cpq PE=1 SV=1 0 2 2 0.482 0 1 1 1 632.86871 1264.73015 1264.73016 -0.01 0 0/0 0 0 7349526.5 HCD 30 MS2 67.02225 1169.9 110 63.0613 18458 18458 18448 QEplus033719.raw F4 1134.8 813 1344.9 1320.9 1001.7 1404 380 2.22 1 FALSE 0.002758 0.05441 0.129 -250 86265 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSQAALPK [K].dSQAALPk.[Y] N-Term(TMT6plex); K8(TMT6plex) 5 A0A0R4J1E3 Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1 F7CPL2; Q9QXS6-3; Q9QXS6; A0A0R4J1E3; Q9QXS6-2 Drebrin (Fragment) OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1; Isoform E2 of Drebrin OS=Mus musculus OX=10090 GN=Dbn1; Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=4; Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1; Isoform A2 of Drebrin OS=Mus musculus OX=10090 GN=Dbn1 0 2 2 0.5927 0 1 1 1 644.3877 1287.76811 1287.76727 0.65 0.00042 0/0 0 0 13615482 HCD 30 MS2 8.16245 1149.4 110 63.0711 18461 18461 18459 QEplus033719.raw F4 1258.4 960.1 1362.4 880.7 1236.8 1197.8 430 2.75 1 FALSE 1.14E-05 0.0002989 0.766 -250 86272 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVNTFSPEGR [R].gVNTFSPEGR.[L] N-Term(TMT6plex) 3 Q9Z2U1 Proteasome subunit alpha type-5 OS=Mus musculus OX=10090 GN=Psma5 PE=1 SV=1 Q9Z2U1; Q3TUX3; Q3TUI9 Proteasome subunit alpha type-5 OS=Mus musculus OX=10090 GN=Psma5 PE=1 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma5 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma5 PE=2 SV=1 0 2 2 0.6959 0 1 1 1 646.84393 1292.68059 1292.67963 0.74 0.00048 0/0 0 0 16324441 HCD 30 MS2 36.48052 1147.1 99.294 63.0758 18463 18463 18459 QEplus033719.raw F4 1202.2 917.8 1195.7 968.8 1286.2 1312 276 3.65 1 FALSE 1.14E-05 3.77E-05 0.938 -250 86290 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALKEDDPK [K].aLkEDDPk.[A] N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex) 4 P61202 COP9 signalosome complex subunit 2 OS=Mus musculus OX=10090 GN=Cops2 PE=1 SV=1 P61202; A2AQE4; P61202-2; Q3UK65 COP9 signalosome complex subunit 2 OS=Mus musculus OX=10090 GN=Cops2 PE=1 SV=1; COP9 signalosome complex subunit 2 OS=Mus musculus OX=10090 GN=Cops2 PE=1 SV=1; Isoform 2 of COP9 signalosome complex subunit 2 OS=Mus musculus OX=10090 GN=Cops2; COP9 signalosome complex subunit 2 OS=Mus musculus OX=10090 GN=Cops2 PE=2 SV=1 1 3 3 0.4017 0 1 1 1 534.99445 1602.96878 1602.96698 1.12 0.0006 0/0 0 0 11014646 HCD 30 MS2 8.715353 1313.5 110 63.0828 18466 18466 18459 QEplus033719.raw F4 1503.2 1035.1 1306.1 1453.3 1390.4 1192.7 401 2.29 1 FALSE 0.002071 0.03843 0.18 -250 86296 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNYDTTESK [R].vNYDTTESk.[L] N-Term(TMT6plex); K9(TMT6plex) 6 A2RS68 U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 A0A1B0GRR8; A2RS68; Q9CR32; Q7TT81; A0A1B0GR44; Q6ZWP0 U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=3; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 0 3 3 0.6023 0 1 1 1 505.60861 1514.81128 1514.81026 0.68 0.00034 0/0 0 0 11852135 HCD 30 MS2 64.13477 1665.2 106.639 63.0852 18467 18467 18459 QEplus033719.raw F4 1813.6 1228.6 1740.6 1771.3 1607.9 1829.4 322 2.64 1 FALSE 0.0008991 0.01244 0.367 -250 86306 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YDGVDAGK [K].yDGVDAGk.[Y] N-Term(TMT6plex); K8(TMT6plex) 6 Q8JZK9 "Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Hmgcs1 PE=1 SV=1" Q8JZK9; Q8K0I5; Q3UWQ9; Q3UJ70; Q3UKE7; Q8C5F4 "Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Hmgcs1 PE=1 SV=1; 3-hydroxy-3-methylglutaryl coenzyme A synthase OS=Mus musculus OX=10090 GN=Hmgcs1 PE=2 SV=1; 3-hydroxy-3-methylglutaryl coenzyme A synthase OS=Mus musculus OX=10090 GN=Hmgcs1 PE=2 SV=1; 3-hydroxy-3-methylglutaryl coenzyme A synthase OS=Mus musculus OX=10090 GN=Hmgcs1 PE=2 SV=1; 3-hydroxy-3-methylglutaryl coenzyme A synthase OS=Mus musculus OX=10090 GN=Hmgcs1 PE=2 SV=1; 3-hydroxy-3-methylglutaryl coenzyme A synthase OS=Mus musculus OX=10090 GN=Hmgcs1 PE=2 SV=1" 0 2 2 0.587 0 1 1 1 641.85724 1282.7072 1282.70434 2.23 0.00143 0/0 0 0 11802445 HCD 30 MS2 48.04892 1401.7 97.265 63.0875 18468 18468 18459 QEplus033719.raw F4 1458.8 1117.7 1676.4 848.8 1757.2 1551.6 294 2.93 1 FALSE 1.14E-05 0.0001985 0.8 -250 86315 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIQLAR [K].dIQLAR.[R] N-Term(TMT6plex) 8 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 0 2 2 0.1853 0 1 1 1 472.79047 944.57366 944.57265 1.07 0.0005 0/0 0 0 38884028 HCD 30 MS2 22.28492 732.1 35.865 63.0973 18471 18471 18470 QEplus033719.raw F4 799.8 693 766.6 496.4 942.3 694.3 249 2.32 2 FALSE 0.002628 0.0521 0.136 -250 86323 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTPEFSHR [R].lTPEFSHR.[L] N-Term(TMT6plex) 2 O89112 Glutathione S-transferase LANCL1 OS=Mus musculus OX=10090 GN=Lancl1 PE=1 SV=1 O89112; B2KGR2 Glutathione S-transferase LANCL1 OS=Mus musculus OX=10090 GN=Lancl1 PE=1 SV=1; Glutathione S-transferase LANCL1 (Fragment) OS=Mus musculus OX=10090 GN=Lancl1 PE=1 SV=1 0 3 3 0.3525 0 1 1 1 405.89508 1215.67069 1215.66834 1.93 0.00078 0/0 0 0 6617549 HCD 30 MS2 36.08476 399.4 110 63.0998 18472 18472 18470 QEplus033719.raw F4 379.1 350.4 431.6 351.4 421.9 462.1 288 3.83 1 FALSE 1.14E-05 4.70E-05 0.92 -250 86329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQSGNINAAK [K].vQSGNINAAk.[TI] N-Term(TMT6plex); K10(TMT6plex) 5 Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 Q3UJP4; E9Q133; Q3U0I3; Q9R1U1; Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; Chaperonin containing TCP-1 gamma subunit (Fragment) OS=Mus musculus OX=10090 GN=Cctg PE=4 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 0 3 3 0.5424 0 1 1 1 487.29315 1459.8649 1459.8633 1.1 0.00053 0/0 0 0 41133852 HCD 30 MS2 38.7073 693.4 25.428 63.1021 18473 18473 18470 QEplus033719.raw F4 720.1 514.4 748.5 654.8 669.9 852.9 515 2.95 1 FALSE 1.14E-05 0.0003742 0.747 -250 86338 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQEIAAVQAR [R].eQEIAAVQAR.[M] N-Term(TMT6plex) 3 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1 0 2 2 0.5 0 1 1 1 672.37848 1343.74968 1343.74804 1.22 0.00082 0/0 0 0 15138817 HCD 30 MS2 24.82129 838.6 110 63.1091 18476 18476 18470 QEplus033719.raw F4 802.8 751.3 895.6 698.7 993.9 889.1 329 3.76 1 FALSE 1.14E-05 2.58E-07 1.349 -250 86371 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTTHPLAK [K].vTTHPLAk.[D] N-Term(TMT6plex); K8(TMT6plex) 3 Q99LX0 Parkinson disease protein 7 homolog OS=Mus musculus OX=10090 GN=Park7 PE=1 SV=1 Q99LX0; A2A815; A2A813 Parkinson disease protein 7 homolog OS=Mus musculus OX=10090 GN=Park7 PE=1 SV=1; Maillard deglycase (Fragment) OS=Mus musculus OX=10090 GN=Park7 PE=1 SV=8; Maillard deglycase OS=Mus musculus OX=10090 GN=Park7 PE=1 SV=1 0 3 3 0.308 0 1 1 1 442.28342 1324.8357 1324.83529 0.31 0.00013 0/0 0 0 44543608 HCD 30 MS2 6.743224 445 28.586 63.1286 18483 18483 18481 QEplus033719.raw F4 436.6 366.8 490.6 421.3 478 476.8 155 2.89 1 FALSE 1.14E-05 0.0004995 0.722 -250 86387 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQHGVPPLK [R].aQHGVPPLk.[L] N-Term(TMT6plex); K9(TMT6plex) 1 Q9CYL5 Golgi-associated plant pathogenesis-related protein 1 OS=Mus musculus OX=10090 GN=Glipr2 PE=1 SV=3 Q9CYL5 Golgi-associated plant pathogenesis-related protein 1 OS=Mus musculus OX=10090 GN=Glipr2 PE=1 SV=3 0 3 3 0.5862 0 1 1 1 468.96298 1404.87439 1404.87274 1.18 0.00055 0/0 0 0 22289700 HCD 30 MS2 40.47165 796.2 64.503 63.1331 18485 18485 18481 QEplus033719.raw F4 807 672 847.7 771.8 823.5 855.3 353 3.48 1 FALSE 0.0002019 0.004072 0.525 -250 86410 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCPHIVVGTPGR [K].ncPHIVVGTPGR.[I] N-Term(TMT6plex); C2(Carbamidomethyl) 4 Q9Z1N5 Spliceosome RNA helicase Ddx39b OS=Mus musculus OX=10090 GN=Ddx39b PE=1 SV=1 Q9Z1N5; A0A1S6GWH2; G3UXI6; Q3TB18 Spliceosome RNA helicase Ddx39b OS=Mus musculus OX=10090 GN=Ddx39b PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39b PE=2 SV=1; Spliceosome RNA helicase Ddx39b (Fragment) OS=Mus musculus OX=10090 GN=Ddx39b PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39b PE=2 SV=1 0 3 3 0.6971 0 1 1 1 512.61426 1535.82822 1535.8314 -2.07 -0.00106 0/0 0 0 21630386 HCD 30 MS2 17.63107 646.5 64.771 63.1404 18488 18488 18481 QEplus033719.raw F4 713 497.7 695.6 559.2 647.8 765.5 362 3.83 1 FALSE 1.14E-05 7.84E-06 1.068 -250 86417 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQVDQLTNDK [R].rQVDQLTNDk.[A] N-Term(TMT6plex); K10(TMT6plex) 9 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 1 3 3 0.6138 0 1 1 1 558.98999 1674.95542 1674.9539 0.9 0.0005 0/0 0 0 13991088 HCD 30 MS2 70.56349 1262.6 87.835 63.1427 18489 18489 18481 QEplus033719.raw F4 1280.2 1112.7 1383.5 999.7 1436.6 1362.9 505 4.35 2 FALSE 1.14E-05 8.12E-08 1.444 -250 86423 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAQEIAPGDK [K].kAQEIAPGDk.[A] N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex) 3 Q9CR16 Peptidyl-prolyl cis-trans isomerase D OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=3 Q9CR16; Q8BMX6; Q3UB60 Peptidyl-prolyl cis-trans isomerase D OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=3; TPR_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ppid PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppid PE=2 SV=1 1 3 3 0.5493 0 1 1 1 582.02521 1744.06107 1744.0572 2.22 0.00129 0/0 0 0 8851137 HCD 30 MS2 24.69257 912.1 110 63.1451 18490 18490 18481 QEplus033719.raw F4 1030 653.3 915.7 865.3 966.3 1042 335 4.26 1 FALSE 1.14E-05 1.70E-09 1.764 -250 86431 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IYGETPEACR [R].iYGETPEAcR.[Q] N-Term(TMT6plex); C9(Carbamidomethyl) 3 Q3TA75 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Fxr2 PE=2 SV=1 Q9WVR4; Q6P5B5; Q3TA75 Fragile X mental retardation syndrome-related protein 2 OS=Mus musculus OX=10090 GN=Fxr2 PE=1 SV=1; Fragile X mental retardation syndrome-related protein 2 OS=Mus musculus OX=10090 GN=Fxr2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Fxr2 PE=2 SV=1 0 2 2 0.6747 0 1 1 1 712.85669 1424.7061 1424.70413 1.38 0.00099 0/0 0 0 7624334.5 HCD 30 MS2 19.88937 454.7 110 63.1477 18491 18491 18481 QEplus033719.raw F4 456.8 377.2 518.5 427.3 445.6 502.8 121 3.32 1 FALSE 1.14E-05 0.0004374 0.734 -250 86440 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVTNNLK [K].tVTNNLk.[S] N-Term(TMT6plex); K7(TMT6plex) 11 G5E8R1 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 E9Q455; G5E8R1; Q8BSH3; E9Q452; F8WID5; E9Q454; G5E8R0; Q564G1; B7ZNL3; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 0 2 2 0.328 0 1 1 1 624.39032 1247.77336 1247.77236 0.81 0.0005 0/0 0 0 366725952 HCD 30 MS2 42.51208 1117.7 4.187 63.155 18493 18493 18492 QEplus033719.raw F4 1143 884 1173 945 1303.8 1257.5 335 3.11 1 FALSE 0.0008183 0.01117 0.386 -250 86449 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQSGNINAAK [K].vQSGNINAAk.[TI] N-Term(TMT6plex); K10(TMT6plex) 5 Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 Q3UJP4; E9Q133; Q3U0I3; Q9R1U1; Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; Chaperonin containing TCP-1 gamma subunit (Fragment) OS=Mus musculus OX=10090 GN=Cctg PE=4 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 0 2 2 0.554 0 1 1 1 730.43622 1459.86516 1459.8633 1.28 0.00093 0/0 0 0 37412572 HCD 30 MS2 9.861671 577.4 47.595 63.1573 18494 18494 18492 QEplus033719.raw F4 559.2 434.2 647 481.2 639.8 703.1 510 4.17 1 FALSE 1.14E-05 1.87E-08 1.565 -250 86459 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAQLAIR [R].aAQLAIR.[V] N-Term(TMT6plex) 2 P62911 60S ribosomal protein L32 OS=Mus musculus OX=10090 GN=Rpl32 PE=1 SV=2 P17932; P62911 Putative 60S ribosomal protein L32' OS=Mus musculus OX=10090 GN=Rpl32-ps PE=5 SV=2; 60S ribosomal protein L32 OS=Mus musculus OX=10090 GN=Rpl32 PE=1 SV=2 0 2 2 0.1434 0 1 1 1 486.3143 971.62132 971.61993 1.43 0.0007 0/0 0 0 131248744 HCD 30 MS2 9.915616 730.8 10.83 63.1595 18495 18495 18492 QEplus033719.raw F4 635.1 651.3 891.4 642.9 626.9 937.2 57 2.58 1 FALSE 0.003658 0.06983 0.088 -250 86469 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVCDIPPR [K].tAVcDIPPR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 9 Q7TMM9; P99024; P68372; Q9CWF2 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1 Q7TMM9; Q9D6F9; Q62363; Q80ZV2; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2 "Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Beta-tubulin gene M-beta-2, 3' end (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1" 0 2 2 0.6773 0 1 1 1 629.34473 1257.68218 1257.68227 -0.08 -0.00005 0/0 0 0 52465652 HCD 30 MS2 14.0501 738.1 37.877 63.1618 18496 18496 18492 QEplus033719.raw F4 750.1 598.5 756.1 550.1 891.5 882.6 224 2.82 4 FALSE 1.14E-05 0.0002522 0.78 -250 86477 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDYEDDRLR [R].mDYEDDRLR.[D] N-Term(TMT6plex) 7 Q6ZQ61 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1 Q6ZQ61; Q4FJT0; A0A494BAZ2; Q3TTX0; Q9R0U5; Q3TZN1; Q5BL18 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matr3 protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin-3 (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin3 OS=Mus musculus OX=10090 PE=4 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin 3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1 1 3 3 0.6404 0 1 1 1 481.23676 1441.69571 1441.69429 0.98 0.00047 0/0 0 0 31739666 HCD 30 MS2 34.99521 917.6 47.306 63.1641 18497 18497 18492 QEplus033719.raw F4 906.9 787.1 1003.7 754.3 1066.7 987 85 3.81 1 FALSE 1.14E-05 5.42E-06 1.098 -250 86491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVMEEMR [R].tVMEEMR.[A] N-Term(TMT6plex) 4 Q3UXN3; Q7TNP6 Cysteinyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1;Cars protein (Fragment) OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1 Q3UXN3; Q7TNP6; Q9ER72; Q3U716 "Cysteinyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1; Cars protein (Fragment) OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1; Cysteine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Cars1 PE=1 SV=2; Cysteinyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1" 0 2 2 0.3621 0 1 1 1 562.78619 1124.56511 1124.56413 0.87 0.00049 0/0 0 0 16271795 HCD 30 MS2 32.84137 1249.4 110 63.1711 18500 18500 18492 QEplus033719.raw F4 1430.8 915.1 1186.2 1383 1300.1 1281 104 2.32 2 FALSE 0.0003496 0.006782 0.462 -250 86500 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYEKPPEK [K].aYEkPPEk.[K] N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex) 2 Q3UXI9 DZF domain-containing protein OS=Mus musculus OX=10090 GN=Ilf2 PE=2 SV=1 Q3UXI9; Q9CXY6 DZF domain-containing protein OS=Mus musculus OX=10090 GN=Ilf2 PE=2 SV=1; Interleukin enhancer-binding factor 2 OS=Mus musculus OX=10090 GN=Ilf2 PE=1 SV=1 0 3 3 0.4885 0 1 1 1 550.33667 1648.99546 1648.98772 4.69 0.00258 0/0 0 0 16137071 HCD 30 MS2 24.20295 1693.5 88.025 63.1733 18501 18501 18492 QEplus033719.raw F4 1688.3 1160.3 1763.8 1946.2 1537.6 2065 375 2.6 1 FALSE 3.35E-05 0.001365 0.634 -250 86506 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLEGEEER [K].lLEGEEER.[L] N-Term(TMT6plex) 8 P48678; P14733; A0A0R4J0Q5 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2;Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3;Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1 P48678; P14733; P48678-2; Q3V159; P48678-3; Q8C553; A0A0R4J0Q5; P21619 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lmnb2 PE=2 SV=1; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; IF rod domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Lmnb1 PE=2 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=2 0 2 2 0.4482 0 1 1 1 602.32471 1203.64214 1203.64185 0.24 0.00014 0/0 0 0 118767864 HCD 30 MS2 11.49985 573.1 11.349 63.1854 18505 18505 18503 QEplus033719.raw F4 589.5 481.4 623 463.9 707.8 573.2 265 2.99 3 FALSE 1.14E-05 0.0002601 0.777 -250 86513 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STMKPVQK [R].sTMkPVQk.[V] N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex) 8 P20029 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q3U9G2; Q3U6V3; Q3TUS2; Q3U7T8; Q3TI47 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1 0 3 3 0.5584 0 1 1 1 536.00433 1605.99845 1605.99651 1.21 0.00065 0/0 0 0 44327596 HCD 30 MS2 10.53116 1603 45.8 63.1877 18506 18506 18503 QEplus033719.raw F4 2068.6 1217.9 1654.3 1772.3 1618.9 1286.2 338 2.31 1 FALSE 0.000262 0.005317 0.494 -250 86525 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNYDTTESK [R].vNYDTTESk.[L] N-Term(TMT6plex); K9(TMT6plex) 6 A2RS68 U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 A0A1B0GRR8; A2RS68; Q9CR32; Q7TT81; A0A1B0GR44; Q6ZWP0 U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=3; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 0 2 2 0.6444 0 1 1 1 757.90912 1514.81096 1514.81026 0.46 0.00035 0/0 0 0 24401788 HCD 30 MS2 0 564.4 50.972 63.1922 18508 18508 18503 QEplus033719.raw F4 550.2 565.7 665.1 409 673.6 522.9 319 3.6 1 FALSE 1.14E-05 4.42E-06 1.115 -250 86532 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTVEPQLEAR [K].gTVEPQLEAR.[G] N-Term(TMT6plex) 7 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; A0A668KLG7; B7FAV1; F6XC15; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.5418 0 1 1 1 443.58429 1328.73832 1328.73715 0.88 0.00039 0/0 0 0 24047954 HCD 30 MS2 38.07743 645.6 61.067 63.1945 18509 18509 18503 QEplus033719.raw F4 641.3 571.6 731.7 535.5 680.7 712.8 314 3.23 1 FALSE 0.0001504 0.003274 0.549 -250 86541 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQVDQLTNDK [R].rQVDQLTNDk.[A] N-Term(TMT6plex); K10(TMT6plex) 9 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 1 2 2 0.6125 0 1 1 1 837.98169 1674.9561 1674.9539 1.31 0.0011 0/0 0 0 7342570 HCD 30 MS2 12.44304 401.7 110 63.1995 18511 18511 18503 QEplus033719.raw F4 420.6 417.8 442.8 261.1 493 375.1 520 2.71 2 FALSE 1.14E-05 2.69E-07 1.346 -250 86548 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPSNSTPPPTQLSK [K].rPSNSTPPPTQLSk.[I] N-Term(TMT6plex); K14(TMT6plex) 4 Q91V89 Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit OS=Mus musculus OX=10090 GN=Ppp2r5d PE=1 SV=1 Q91V89; Q7TNL5; Q8K5D8; Q99PC9 Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit OS=Mus musculus OX=10090 GN=Ppp2r5d PE=1 SV=1; Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit OS=Mus musculus OX=10090 GN=Ppp2r5d PE=1 SV=1; Protein phosphatase 2a regulatory b56-delta subunit (Fragment) OS=Mus musculus OX=10090 GN=ppp2r5d PE=3 SV=1; Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit OS=Mus musculus OX=10090 GN=Ppp2r5d PE=2 SV=1 0 3 3 0.6621 0 1 1 1 656.71478 1968.12979 1968.12785 0.99 0.00065 0/0 0 0 5609872 HCD 30 MS2 14.81497 427.7 110 63.202 18512 18512 18503 QEplus033719.raw F4 401.9 396.8 474.2 300.3 535.3 457.7 382 5.12 1 FALSE 1.14E-05 1.88E-12 2.325 -250 86553 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDAISEEK [R].tDAISEEk.[L] N-Term(TMT6plex); K8(TMT6plex) 3 Q99JZ4 GTP-binding protein SAR1a OS=Mus musculus OX=10090 GN=Sar1a PE=1 SV=1 Q3TXJ4; Q99JZ4; P36536 Uncharacterized protein OS=Mus musculus OX=10090 GN=Sar1a PE=2 SV=1; GTP-binding protein SAR1a OS=Mus musculus OX=10090 GN=Sar1a PE=1 SV=1; GTP-binding protein SAR1a OS=Mus musculus OX=10090 GN=Sar1a PE=1 SV=1 0 2 2 0.5296 0 1 1 1 675.87982 1350.75237 1350.75168 0.51 0.00034 0/0 0 0 6180630 HCD 30 MS2 0 552.2 110 63.2045 18513 18513 18503 QEplus033719.raw F4 529.8 434.5 577.1 484.3 687.8 599.8 369 3.04 1 FALSE 1.14E-05 0.0001071 0.851 -250 86559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVSGIK [R].eVSGIk.[AT] N-Term(TMT6plex); K6(TMT6plex) 5 P48678; A0A0R4J0Q5 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2;Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1 D3YUF7; P48678; P48678-2; A0A0R4J0Q5; P21619 Prelamin-A/C (Fragment) OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=1; Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=2 0 2 2 0.1395 0 1 1 2 545.84772 1090.68816 1090.68723 0.85 0.00046 0/0 0 0 120714704 HCD 30 MS2 31.22769 807.7 9.116 63.2118 18515 18515 18514 QEplus033719.raw F4 851.9 609.1 798.2 760.8 1087.6 738.7 200 2.15 2 FALSE 0.005946 0.09858 0.01 -250 86572 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLQSVAEER [R].sLQSVAEER.[A] N-Term(TMT6plex) 3 Q5M8Q0 Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1 Q5M8Q0; Q3U7D2; B8JKK2 Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1; Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1; Ribosomal protein L15 (Fragment) OS=Mus musculus OX=10090 GN=Rpl15 PE=1 SV=1 0 2 2 0.5983 0 1 1 1 624.34467 1247.68205 1247.6793 2.21 0.00138 0/0 0 0 342220480 HCD 30 MS2 45.41769 981.5 4.15 63.2164 18517 18517 18514 QEplus033719.raw F4 1005.5 778.7 1051.9 833 1162.4 1057.4 311 3.51 1 FALSE 1.14E-05 5.71E-06 1.094 -250 86585 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FKQESTVATER [K].fkQESTVATER.[Q] N-Term(TMT6plex); K2(TMT6plex) 3 Q3TUQ5 Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=1 Q3TUQ5; O35691; Q9CV89 Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=1; Pinin OS=Mus musculus OX=10090 GN=Pnn PE=1 SV=4; Pinin (Fragment) OS=Mus musculus OX=10090 GN=Pnn PE=2 SV=1 1 3 3 0.5645 0 1 1 1 585.33453 1753.98905 1753.98487 2.38 0.00139 0/0 0 0 14644332 HCD 30 MS2 22.02467 1235.6 110 63.2211 18519 18519 18514 QEplus033719.raw F4 1272.2 1236.6 1292.2 853.3 1624.6 1134.9 409 2.87 1 FALSE 1.14E-05 2.70E-07 1.345 -250 86594 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQEIAAVQAR [R].eQEIAAVQAR.[M] N-Term(TMT6plex) 3 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1 0 3 3 0.5483 0 1 1 1 448.58768 1343.74848 1343.74804 0.32 0.00014 0/0 0 0 11517272 HCD 30 MS2 41.15332 765.8 110 63.2236 18520 18520 18514 QEplus033719.raw F4 786.8 615.8 794.8 572.1 940.7 884.7 327 3.52 1 FALSE 1.14E-05 0.0006825 0.696 -250 86610 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IEASLR [RK].iEASLR.[EK] N-Term(TMT6plex) 3 Q8CGF7 Transcription elongation regulator 1 OS=Mus musculus OX=10090 GN=Tcerg1 PE=1 SV=2 Q8CGF7-3; Q8CGF7-2; Q8CGF7 Isoform 3 of Transcription elongation regulator 1 OS=Mus musculus OX=10090 GN=Tcerg1; Isoform 2 of Transcription elongation regulator 1 OS=Mus musculus OX=10090 GN=Tcerg1; Transcription elongation regulator 1 OS=Mus musculus OX=10090 GN=Tcerg1 PE=1 SV=2 0 2 2 0.0792 0 1 1 3 459.28458 917.56188 917.56175 0.14 0.00006 0/0 0 0 10585989 HCD 30 MS2 50.8357 996.3 110 63.2286 18522 18522 18514 QEplus033719.raw F4 1169.1 862.4 1049.7 726.1 1132.3 1038.2 196 2.02 1 FALSE 0.001658 0.02733 0.231 -250 86611 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEASLR [RK].lEASLR.[EK] N-Term(TMT6plex) 3 E9Q8Z1; B9EKK2; Q8CDD5 "Predicted gene 6583 OS=Mus musculus OX=10090 GN=Gm6583 PE=4 SV=1; Predicted gene, EG625424 OS=Mus musculus OX=10090 GN=Gm6583 PE=2 SV=1; DUF4515 domain-containing protein OS=Mus musculus OX=10090 GN=Gm6583 PE=2 SV=1" 0 2 2 0.0792 0 1 2 2 459.28458 917.56188 917.56175 0.14 0.00006 0/0 0 0 10585989 HCD 30 MS2 50.8357 996.3 110 63.2286 18522 18522 18514 QEplus033719.raw F4 1169.1 862.4 1049.7 726.1 1132.3 1038.2 196 2.02 1 FALSE 0.001658 0.02733 0.231 -250 86615 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TALEENPK [K].tALEENPk.[K] N-Term(TMT6plex); K8(TMT6plex) 1 Q8BVF2 Phosducin-like protein 3 OS=Mus musculus OX=10090 GN=Pdcl3 PE=1 SV=1 Q8BVF2 Phosducin-like protein 3 OS=Mus musculus OX=10090 GN=Pdcl3 PE=1 SV=1 0 2 2 0.2694 0 1 1 1 680.40015 1359.79302 1359.7884 3.39 0.00231 0/0 0 0 5562534 HCD 30 MS2 23.19153 622.2 110 63.2311 18523 18523 18514 QEplus033719.raw F4 620.6 527.8 736.8 500.9 627.2 719.9 428 2.97 1 FALSE 1.14E-05 0.0008694 0.674 -250 86623 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CTCPALK [R].cTcPALk.[G] N-Term(TMT6plex); C1(Carbamidomethyl); C3(Carbamidomethyl); K7(TMT6plex) 6 Q5DTP7 DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Chd4 PE=2 SV=1 Q3U582; Q8BM83; Q5DTP7; E9QAS5; Q6PDQ2; E9QAS4 DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Chd4 PE=2 SV=1; DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Chd4 PE=2 SV=1; DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Chd4 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1; Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1 0 2 2 0.4191 0 1 1 1 654.36285 1307.71843 1307.72159 -2.41 -0.00158 0/0 0 0 4953607.5 HCD 30 MS2 27.89372 571.6 110 63.2336 18524 18524 18514 QEplus033719.raw F4 550.3 464.6 612.4 503.3 638.7 660.6 430 2.41 1 FALSE 0.002056 0.03708 0.185 -250 86640 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RALIQCAK [K].rALIQcAk.[D] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 1 3 3 0.531 0 1 1 1 473.29547 1417.87186 1417.87136 0.35 0.00017 0/0 0 0 58679052 HCD 30 MS2 31.07091 737.7 21.907 63.2457 18528 18528 18525 QEplus033719.raw F4 756.6 686 841.1 536.2 898.1 708.3 383 4.03 1 FALSE 1.14E-05 7.56E-07 1.26 -250 86658 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FIHDQTSSNPK [K].fIHDQTSSNPk.[Y] N-Term(TMT6plex); K11(TMT6plex) 2 Q8JZU2 "Tricarboxylate transport protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a1 PE=1 SV=1" F6VVY4; Q8JZU2 "Tricarboxylate transport protein, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Slc25a1 PE=1 SV=1; Tricarboxylate transport protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a1 PE=1 SV=1" 0 3 3 0.7007 0 1 1 1 577.98608 1731.9437 1731.943 0.4 0.00023 0/0 0 0 12387744 HCD 30 MS2 42.1082 984.5 110 63.2527 18531 18531 18525 QEplus033719.raw F4 951.1 895.3 1010.9 954.8 1084.2 1010.7 403 4.31 1 FALSE 1.14E-05 8.50E-09 1.631 -250 86661 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADSSMSQEQLRK [K].aDSSMSQEQLRk.[L] N-Term(TMT6plex); K12(TMT6plex) 1 Q543N7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pacsin3 PE=1 SV=1 Q543N7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pacsin3 PE=1 SV=1 1 3 3 0.5374 0 1 1 1 613.33441 1837.98868 1837.98422 2.43 0.00149 0/0 0 0 11862726 HCD 30 MS2 6.067628 866.2 110 63.2552 18532 18532 18525 QEplus033719.raw F4 963.8 501.8 907.1 1067.7 603.2 1153.6 431 2.81 1 FALSE 1.14E-05 4.50E-09 1.683 -250 86678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQSQTVGQGSDAHFR [R].iQSQTVGQGSDAHFR.[V] N-Term(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.7691 0 1 1 1 620.65778 1859.95877 1859.95614 1.42 0.00088 0/0 0 0 7771478 HCD 30 MS2 22.97534 482.1 110 63.2603 18534 18534 18525 QEplus033719.raw F4 499.7 387.1 494.7 369.7 684.2 456.9 279 5.5 2 FALSE 1.14E-05 1.25E-12 2.359 -250 86698 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FPNQNQTK [R].fPNQNQTk.[N] N-Term(TMT6plex); K8(TMT6plex) 1 P56391 Cytochrome c oxidase subunit 6B1 OS=Mus musculus OX=10090 GN=Cox6b1 PE=1 SV=2 P56391 Cytochrome c oxidase subunit 6B1 OS=Mus musculus OX=10090 GN=Cox6b1 PE=1 SV=2 0 3 3 0.4311 0 1 1 1 478.94199 1434.8114 1434.81053 0.61 0.00029 0/0 0 0 15695468 HCD 30 MS2 11.49943 563.2 64.212 63.2723 18538 18538 18536 QEplus033719.raw F4 602.9 406.9 585.2 548.8 551.6 683.8 473 2.83 1 FALSE 0.001591 0.02434 0.249 -250 86706 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVDFAER [R].aVDFAER.[H] N-Term(TMT6plex) 4 P62918 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2 Q3UJS0; P62918; Q9Z237; Q3THC7 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2; Ribosomal protein L8 (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1 0 2 2 0.4948 0 1 1 1 518.78546 1036.56365 1036.56248 1.13 0.00059 0/0 0 0 60065892 HCD 30 MS2 35.73476 855 16.97 63.2746 18539 18539 18536 QEplus033719.raw F4 831.4 665.6 934.2 818.1 893.6 987 200 2.89 1 FALSE 0.0002119 0.004431 0.516 -250 86756 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASQGLELER [R].aSQGLELER.[G] N-Term(TMT6plex) 4 P39061-1 Isoform 2 of Collagen alpha-1(XVIII) chain OS=Mus musculus OX=10090 GN=Col18a1 P39061-2; P39061-1; E9QPX1; P39061 Isoform 3 of Collagen alpha-1(XVIII) chain OS=Mus musculus OX=10090 GN=Col18a1; Isoform 2 of Collagen alpha-1(XVIII) chain OS=Mus musculus OX=10090 GN=Col18a1; Collagen alpha-1(XVIII) chain OS=Mus musculus OX=10090 GN=Col18a1 PE=1 SV=1; Collagen alpha-1(XVIII) chain OS=Mus musculus OX=10090 GN=Col18a1 PE=1 SV=4 0 2 2 0.4263 0 1 1 1 616.34442 1231.68157 1231.68438 -2.29 -0.00141 0/0 0 0 15728866 HCD 30 MS2 28.1298 1232.5 96.87 63.2907 18546 18546 18536 QEplus033719.raw F4 1128.5 1239.2 1458.6 1060.4 1247.5 1260.9 389 3.12 1 FALSE 1.14E-05 5.20E-05 0.911 -250 86773 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPSAQELK [K].sPSAQELk.[E] N-Term(TMT6plex); K8(TMT6plex) 2 Q9WUD1 E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1 Q9WUD1; Q3TYJ0 E3 ubiquitin-protein ligase CHIP OS=Mus musculus OX=10090 GN=Stub1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stub1 PE=2 SV=1 0 2 2 0.4577 0 1 1 1 659.39386 1317.78044 1317.77784 1.98 0.0013 0/0 0 0 13255086 HCD 30 MS2 26.88875 850.3 110 63.3005 18549 18549 18547 QEplus033719.raw F4 842.5 775 933.4 615.2 1058.1 877.5 560 2.84 1 FALSE 0.0006294 0.009696 0.409 -250 86780 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANPFGGASHAK [K].aNPFGGASHAk.[G] N-Term(TMT6plex); K11(TMT6plex) 5 Q9CWI9 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1 Q497E1; Q9CSN9; Q9CWI9; Q9CZI5; P62267 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 (Fragment) OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=1 SV=3 0 3 3 0.7381 0 1 1 1 505.62122 1514.84909 1514.84798 0.73 0.00037 0/0 0 0 70209880 HCD 30 MS2 39.36312 926.1 18.666 63.3028 18550 18550 18547 QEplus033719.raw F4 943.7 760.7 962.3 857.5 1050.8 981.5 424 5.04 1 FALSE 1.14E-05 1.05E-14 2.753 -250 86790 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETADFK [KR].eTADFk.[V] N-Term(TMT6plex); K6(TMT6plex) 7 Q80X90; B9EKP5 "Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3;Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; Q80X90; B7FAV1; F6XC15; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.2844 0 1 1 1 584.83502 1168.66277 1168.66141 1.16 0.00068 0/0 0 0 55536092 HCD 30 MS2 5.685956 1194.8 27.609 63.3073 18552 18552 18547 QEplus033719.raw F4 1295.1 1203.3 1106.6 761 1880.9 921.8 203 2.25 2 FALSE 0.006061 0.09962 0.008 -250 86798 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVESVPK [K].sVESVPk.[L] N-Term(TMT6plex); K7(TMT6plex) 1 P28474 Alcohol dehydrogenase class-3 OS=Mus musculus OX=10090 GN=Adh5 PE=1 SV=3 P28474 Alcohol dehydrogenase class-3 OS=Mus musculus OX=10090 GN=Adh5 PE=1 SV=3 0 2 2 0.3109 0 1 1 1 602.37158 1203.73589 1203.73491 0.81 0.00049 0/0 0 0 45589424 HCD 30 MS2 44.13861 900.6 23.357 63.3096 18553 18553 18547 QEplus033719.raw F4 952.7 767.3 972.3 743.6 1041.3 926.6 630 2.38 1 FALSE 0.000565 0.008623 0.428 -250 86813 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKEEEEDK [R].lkEEEEDk.[K] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 1 B2MWM9 Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 B2MWM9 Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 1 3 3 0.3811 0 1 1 1 569.66449 1706.97892 1706.97794 0.57 0.00032 0/0 0 0 35392256 HCD 30 MS2 10.87658 1236.5 38.189 63.3141 18555 18555 18547 QEplus033719.raw F4 1571.9 941 1265.6 1228.5 1361.4 1050.3 496 2.86 1 FALSE 1.14E-05 0.0008029 0.681 -250 86819 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DEAAAATEPGAGAADK [K].dEAAAATEPGAGAADk.[E] N-Term(TMT6plex); K16(TMT6plex) 2 P26645 Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2 P26645; Q05BL6 Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2; Marcks protein (Fragment) OS=Mus musculus OX=10090 GN=Marcks PE=2 SV=1 0 3 3 0.7764 0 1 1 1 634.99878 1902.98178 1902.98091 0.46 0.00029 0/0 0 0 21538664 HCD 30 MS2 8.642192 710.6 110 63.3166 18556 18556 18547 QEplus033719.raw F4 746.7 508.2 706.8 392.6 1228.2 681.1 288 5.77 1 FALSE 1.14E-05 9.46E-13 2.381 -250 86834 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSYVGDEAQSK [KR].dSYVGDEAQSk.[RT] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; Q8CF71; P63268; Q61274; V9GXQ2; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Predicted gene 17087 OS=Mus musculus OX=10090 GN=Gm17087 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 2 2 0.5835 0 1 1 1 828.92883 1656.85039 1656.8481 1.38 0.00114 0/0 0 0 17699598 HCD 30 MS2 12.13112 706.9 110 63.3262 18559 18559 18558 QEplus033719.raw F4 656.3 564.2 782.2 622.1 829.4 787.3 230 4.97 4 FALSE 1.14E-05 3.07E-10 1.904 -250 86853 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVTNNLK [K].nVTNNLk.[S] N-Term(TMT6plex); K7(TMT6plex) 6 A0A0R4J1P2; Q6IRU2 Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 A0A571BEU1; D3Z6I8; A0A0R4J1P2; P21107; Q6IRU2; E9Q7Q3 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=3; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1 0 2 2 0.4072 0 1 1 1 630.8877 1260.76811 1260.76761 0.4 0.00025 0/0 0 0 72449904 HCD 30 MS2 16.38865 1188 28.862 63.3309 18561 18561 18558 QEplus033719.raw F4 1363.5 1134.1 1117.4 775.9 1783.7 953.3 658 3.07 2 FALSE 0.0005373 0.008197 0.435 -250 86862 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FAAAYCR [K].fAAAYcR.[S] N-Term(TMT6plex); C6(Carbamidomethyl) 1 Q3UFJ3 Pyruvate dehydrogenase E1 component subunit alpha OS=Mus musculus OX=10090 GN=Pdha1 PE=1 SV=1 Q3UFJ3 Pyruvate dehydrogenase E1 component subunit alpha OS=Mus musculus OX=10090 GN=Pdha1 PE=1 SV=1 0 2 2 0.478 0 1 1 1 544.28235 1087.55742 1087.55562 1.66 0.0009 0/0 0 0 38182432 HCD 30 MS2 47.50376 1020.9 33.374 63.3332 18562 18562 18558 QEplus033719.raw F4 859 843.7 1199.2 995.6 999.1 1228.7 86 1.82 1 FALSE 0.004222 0.07729 0.069 -250 86888 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRTELADK [R].vRTELADk.[V] N-Term(TMT6plex); K8(TMT6plex) 3 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; O89055; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Nonmuscle myosin heavy chain-A (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 1 3 3 0.3717 0 1 1 1 463.95416 1389.84793 1389.84659 0.97 0.00045 0/0 0 0 30712620 HCD 30 MS2 27.45504 855.6 38.681 63.3399 18565 18565 18558 QEplus033719.raw F4 948.1 850.5 962.6 602.7 985.7 784 409 3.39 1 FALSE 0.0003312 0.00637 0.471 -250 86907 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQSLEAEEAK [K].qQSLEAEEAk.[R] N-Term(TMT6plex); K10(TMT6plex) 4 A0A0R4J1E3 Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1 Q9QXS6-3; Q9QXS6; A0A0R4J1E3; Q9QXS6-2 Isoform E2 of Drebrin OS=Mus musculus OX=10090 GN=Dbn1; Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=4; Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1; Isoform A2 of Drebrin OS=Mus musculus OX=10090 GN=Dbn1 0 3 3 0.6306 0 1 1 1 530.9635 1590.87595 1590.87392 1.27 0.00068 0/0 0 0 17835876 HCD 30 MS2 68.48117 1265.6 75.932 63.3444 18567 18567 18558 QEplus033719.raw F4 1387.6 927.8 1371.3 910 1504.1 1493 407 3.79 1 FALSE 1.14E-05 7.71E-07 1.259 -250 86913 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLANPGNSQVAR [R].vLANPGNSQVAR.[V] N-Term(TMT6plex) 4 Q3TFE8 Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1 Q3TFE8; Q7TSZ6; Q3UHW8; P70168 Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1; Karyopherin (Importin) beta 1 OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1; Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1; Importin subunit beta-1 OS=Mus musculus OX=10090 GN=Kpnb1 PE=1 SV=2 0 2 2 0.7652 0 1 1 1 727.91901 1454.83074 1454.82769 2.09 0.00152 0/0 0 0 15346239 HCD 30 MS2 0 419.5 110 63.347 18568 18568 18558 QEplus033719.raw F4 422.6 378.9 449.6 314.1 515.9 436.1 313 3.62 1 FALSE 1.14E-05 8.40E-09 1.632 -250 86922 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTVEPQLEAR [K].gTVEPQLEAR.[G] N-Term(TMT6plex) 7 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; A0A668KLG7; B7FAV1; F6XC15; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.4872 0 1 1 1 664.87256 1328.73784 1328.73715 0.52 0.00035 0/0 0 0 19547088 HCD 30 MS2 4.949191 704.8 110 63.3543 18570 18570 18569 QEplus033719.raw F4 676.2 695.1 754.2 485.7 963 654.5 305 3.51 1 FALSE 1.14E-05 2.89E-07 1.34 -250 86928 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITQNNAMK [K].iTQNNAMk.[I] N-Term(TMT6plex); K8(TMT6plex) 2 Q62189 U1 small nuclear ribonucleoprotein A OS=Mus musculus OX=10090 GN=Snrpa PE=1 SV=3 Q9CXX7; Q62189 Uncharacterized protein OS=Mus musculus OX=10090 GN=Snrpa PE=2 SV=1; U1 small nuclear ribonucleoprotein A OS=Mus musculus OX=10090 GN=Snrpa PE=1 SV=3 0 2 2 0.485 0 1 1 1 689.39978 1377.79228 1377.79244 -0.11 -0.00008 0/0 0 0 13050121 HCD 30 MS2 0 853.8 110 63.3568 18571 18571 18569 QEplus033719.raw F4 965.8 751.4 859.4 622.5 1091.6 831.8 494 3.67 1 FALSE 1.14E-05 8.63E-05 0.869 -250 86934 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANSEVAQWR [K].aNSEVAQWR.[T] N-Term(TMT6plex) 13 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; B2RWX0; B2RQQ1; I6L963; B1AR69; B2RY26; B2RXX9; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.7414 0 1 1 1 645.34412 1289.68096 1289.67996 0.77 0.0005 0/0 0 0 72384432 HCD 30 MS2 20.18538 936.7 26.572 63.3591 18572 18572 18569 QEplus033719.raw F4 1065.7 261.2 756.6 1803.2 337.7 1395.7 275 3.48 5 FALSE 1.14E-05 6.56E-05 0.892 -250 86943 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIDPKPCTPR [R].nIDPkPcTPR.[G] N-Term(TMT6plex); K5(TMT6plex); C7(Carbamidomethyl) 5 Q9JII5 DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2 Q9JII5; Q9JII5-2; Q3UGB5; D3Z4J1; Q3U878 DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2; Isoform 2 of DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1; DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=1; DAZ-associated protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dazap1 PE=2 SV=1 0 3 3 0.4919 0 1 1 1 552.64905 1655.93259 1655.93033 1.36 0.00075 0/0 0 0 35873232 HCD 30 MS2 40.15929 990.2 34.074 63.3636 18574 18574 18569 QEplus033719.raw F4 961.5 950.2 1130.9 730.8 1184.5 983.3 388 2.46 1 FALSE 0.001343 0.01898 0.29 -250 86949 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHPFIK [R].aHPFIk.[E] N-Term(TMT6plex); K6(TMT6plex) 4 O89079 Coatomer subunit epsilon OS=Mus musculus OX=10090 GN=Cope PE=1 SV=3 O89079; F6XIG5; F6YFR7; Q9D1J2 Coatomer subunit epsilon OS=Mus musculus OX=10090 GN=Cope PE=1 SV=3; Coatomer subunit epsilon (Fragment) OS=Mus musculus OX=10090 GN=Cope PE=1 SV=1; Coatomer subunit epsilon (Fragment) OS=Mus musculus OX=10090 GN=Cope PE=1 SV=1; Coatomer subunit epsilon OS=Mus musculus OX=10090 GN=Cope PE=2 SV=1 0 3 3 0.3597 0 1 1 1 390.91843 1170.74073 1170.73994 0.68 0.00026 0/0 0 0 22450848 HCD 30 MS2 29.92235 738.3 53.078 63.3681 18576 18576 18569 QEplus033719.raw F4 628 714.9 851.1 525.5 921 789.6 156 2.53 1 FALSE 0.001395 0.01985 0.282 -250 86957 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQSLEAEEAK [K].qQSLEAEEAk.[R] N-Term(TMT6plex); K10(TMT6plex) 4 A0A0R4J1E3 Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1 Q9QXS6-3; Q9QXS6; A0A0R4J1E3; Q9QXS6-2 Isoform E2 of Drebrin OS=Mus musculus OX=10090 GN=Dbn1; Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=4; Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1; Isoform A2 of Drebrin OS=Mus musculus OX=10090 GN=Dbn1 0 2 2 0.6545 0 1 1 1 795.94153 1590.87578 1590.87392 1.17 0.00093 0/0 0 0 18797794 HCD 30 MS2 6.302961 723.2 110 63.3706 18577 18577 18569 QEplus033719.raw F4 797.7 533.8 889.7 503.4 783.2 831.2 401 4.11 1 FALSE 1.14E-05 4.38E-08 1.495 -250 86963 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGETWDSK [R].sGETWDSk.[F] N-Term(TMT6plex); K8(TMT6plex) 7 Q3THP1 Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1 Q99KK7; Q3THP1; Q6NXZ0; Q3UDD5; Q3UDF3; Q3UDY7; Q8BU29 Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=1 SV=2; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1 0 2 2 0.4244 0 1 1 1 684.3656 1367.72392 1367.72072 2.35 0.0016 0/0 0 0 16352898 HCD 30 MS2 26.7105 1069.7 110 63.3731 18578 18578 18569 QEplus033719.raw F4 1029.8 938.2 1245.7 910.4 1017.1 1276.9 260 2.71 1 FALSE 1.14E-05 0.0003312 0.757 -250 86972 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLYAQK [R].qLYAQk.[L] N-Term(TMT6plex); K6(TMT6plex) 6 Q3TGS1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ehd1 PE=2 SV=1 Q3TIT3; Q3TUW9; Q3TGS1; Q3T9A1; Q8K1X5; Q9WVK4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ehd1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ehd1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ehd1 PE=2 SV=1; Dynamin-type G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ehd1 PE=2 SV=1; EH-domain containing 1 (Fragment) OS=Mus musculus OX=10090 GN=Ehd1 PE=2 SV=2; EH domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ehd1 PE=1 SV=1 0 2 2 0.1355 0 1 1 1 604.87524 1208.74321 1208.74033 2.38 0.00144 0/0 0 0 14206733 HCD 30 MS2 46.04202 1591.9 110 63.3756 18579 18579 18569 QEplus033719.raw F4 1728.6 1317.3 1658.8 1392.3 1796.2 1658.1 170 2.73 1 FALSE 0.003616 0.06945 0.089 -250 86982 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AALAGYPR [R].aALAGYPR.[A] N-Term(TMT6plex) 2 Q3TJC2 SGNH_hydro domain-containing protein OS=Mus musculus OX=10090 GN=Pafah1b3 PE=1 SV=1 Q3TJC2; D3Z7E6 SGNH_hydro domain-containing protein OS=Mus musculus OX=10090 GN=Pafah1b3 PE=1 SV=1; Platelet-activating factor acetylhydrolase IB subunit alpha1 OS=Mus musculus OX=10090 GN=Pafah1b3 PE=1 SV=1 0 2 2 0.4739 0 1 1 1 524.31586 1047.62444 1047.61485 9.16 0.0048 0/0 0 0 7825699.5 HCD 30 MS2 36.73923 1094.1 110 63.3829 18581 18581 18580 QEplus033719.raw F4 1027 975 1272.5 854.3 1158.1 1278 170 2.3 1 FALSE 0.0002419 0.004951 0.502 -250 86992 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSDPMETEEK [K].dSDPMETEEk.[T] N-Term(TMT6plex); K10(TMT6plex) 6 Q3TXS7 26S proteasome non-ATPase regulatory subunit 1 OS=Mus musculus OX=10090 GN=Psmd1 PE=1 SV=1 Q05CG9; Q5HZG6; Q8BU34; Q8CGG2; Q3TXS7; Q8CGI9 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=2; 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 1 OS=Mus musculus OX=10090 GN=Psmd1 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Psmd1 PE=2 SV=1 0 2 2 0.7636 0 1 1 1 819.90045 1638.79363 1638.79329 0.21 0.00017 0/0 0 0 13950047 HCD 30 MS2 0 954.5 110 63.3855 18582 18582 18580 QEplus033719.raw F4 1014 720.8 1062.6 873.6 932 1124.3 106 3.85 1 FALSE 1.14E-05 2.88E-07 1.34 -250 86998 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGQIIPTAR [R].gGGQIIPTAR.[R] N-Term(TMT6plex) 26 Q3UMI7; Q3U5Q3 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1;116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=2 SV=1 Q3UMI7; Q3TSK4; Q8C153; P58252; Q61509; Q3TW58; G3UZ34; Q3UDC8; Q3TJZ1; Q3UBL9; Q3U5Q3; Q3TMY8; Q8BMA8; Q6P9L9; Q3TPG2; Q543F1; Q3UZ14; Q3TK17; Q99LT6; Q3TLB1; Q6A0E3; Q7TMX4; G3UXK8; Q3TWX1; Q3TX47; A2AH85 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Elongation factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=1 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=1 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component (Fragment) OS=Mus musculus OX=10090 GN=Eftud2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component (Fragment) OS=Mus musculus OX=10090 GN=Eftud2 PE=1 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=1 SV=1 0 2 2 0.7093 0 1 1 1 599.85986 1198.71245 1198.71054 1.6 0.00096 0/0 0 0 91115200 HCD 30 MS2 23.58166 772.3 12.628 63.3877 18583 18583 18580 QEplus033719.raw F4 785.5 554.2 869.5 756.3 779 889.3 233 2.58 2 FALSE 1.14E-05 7.01E-06 1.077 -250 87001 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGSAVVTR [K].lGSAVVTR.[G] N-Term(TMT6plex) 6 Q3TWN8 Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1 Q3TWN8; Q3UZ27; Q9Z110; Q9Z110-2; D3Z0B4; Q3UGW8 Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1; Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=1 SV=2; Isoform Short of Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1; Delta-1-pyrroline-5-carboxylate synthase (Fragment) OS=Mus musculus OX=10090 GN=Aldh18a1 PE=1 SV=2; Gamma-glutamyl kinase (Fragment) OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1 0 2 2 0.3992 0 1 1 1 516.32568 1031.64409 1031.64106 2.94 0.00152 0/0 0 0 53399980 HCD 30 MS2 18.70465 946.2 32.05 63.39 18584 18584 18580 QEplus033719.raw F4 930.9 882.1 1107.5 860.2 938.9 957.4 87 2.43 1 FALSE 1.14E-05 0.0006551 0.699 -250 87034 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RALIQCAK [K].rALIQcAk.[D] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 1 2 2 0.5388 0 1 1 1 709.44049 1417.8737 1417.87136 1.65 0.00117 0/0 0 0 16425854 HCD 30 MS2 29.63683 785.8 110 63.3993 18588 18588 18580 QEplus033719.raw F4 761.4 722.5 907.9 662.3 840.2 820.3 374 2.19 1 FALSE 1.14E-05 0.0009455 0.667 -250 87040 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGALFK [R].rGALFk.[V] N-Term(TMT6plex); K6(TMT6plex) 1 Q8BGH2 Sorting and assembly machinery component 50 homolog OS=Mus musculus OX=10090 GN=Samm50 PE=1 SV=1 Q8BGH2 Sorting and assembly machinery component 50 homolog OS=Mus musculus OX=10090 GN=Samm50 PE=1 SV=1 1 3 3 0.2197 0 1 1 1 383.922 1149.75144 1149.75083 0.52 0.0002 0/0 0 0 16030272 HCD 30 MS2 23.21423 780.2 84.673 63.4015 18589 18589 18580 QEplus033719.raw F4 740.4 610.2 860.3 767.2 745.5 957.6 32 2.64 1 FALSE 0.001719 0.02871 0.223 -250 87050 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQEFEMK [K].rQEFEMk.[I] N-Term(TMT6plex); K7(TMT6plex) 1 ENSEMBL:ENSBTAP00000024146 (Bos taurus) similar to alpha-2-macroglobulin isoform 1 ENSEMBL:ENSBTAP00000024146 (Bos taurus) similar to alpha-2-macroglobulin isoform 1 1 3 3 0.3975 0 1 1 1 475.9364 1425.79465 1425.79244 1.55 0.00074 0/0 0 0 15575867 HCD 30 MS2 56.5459 1042.9 100.491 63.4039 18590 18590 18580 QEplus033719.raw F4 1084.8 682.4 934.5 616.2 2046.8 892.9 311 2.39 1 TRUE 0.003768 0.07154 0.084 -250 87057 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DEAAAATEPGAGAADK [K].dEAAAATEPGAGAADk.[E] N-Term(TMT6plex); K16(TMT6plex) 2 P26645 Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2 P26645; Q05BL6 Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2; Marcks protein (Fragment) OS=Mus musculus OX=10090 GN=Marcks PE=2 SV=1 0 2 2 0.8357 0 1 1 1 951.99493 1902.98259 1902.98091 0.89 0.00084 0/0 0 0 15978331 HCD 30 MS2 4.359747 453.7 110 63.4112 18592 18592 18591 QEplus033719.raw F4 487.5 331.1 427.7 212.2 883.6 380.4 289 5.54 1 FALSE 1.14E-05 6.31E-16 3.45 -250 87060 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALAENSGVK [R].aLAENSGVk.[A] N-Term(TMT6plex); K9(TMT6plex) 9 Q6A0F1 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1 Q9CS06; H3BJB6; Q8BVY8; Q3UKQ2; Q9CRW7; Q6A0F1; H3BL49; P42932; Q9WVS5 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; T-complex protein 1 subunit theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1; T-complex protein 1 subunit theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=3; CCT-theta OS=Mus musculus OX=10090 GN=Cctq PE=3 SV=1 0 2 2 0.5068 0 1 1 1 673.90656 1346.80583 1346.80439 1.07 0.00072 0/0 0 0 21895930 HCD 30 MS2 18.60505 1025.3 110 63.4137 18593 18593 18591 QEplus033719.raw F4 1141.4 925.9 1088.8 785.7 1137.2 1073 555 3.67 1 FALSE 1.14E-05 1.37E-06 1.211 -250 87076 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAEEGPVEDTKPKPSR [K].dAEEGPVEDTkPkPSR.[L] N-Term(TMT6plex); K11(TMT6plex); K13(TMT6plex) 12 K3W4R7 "Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1" K3W4R7; J3QQ13; A0A087WRX3; Q3TQ90; P50752; P50752-3; Q3TH80; P50752-2; P50752-4; K3W4R6; A0A087WQP1; Q6P3Z7 "Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Troponin T, cardiac muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tnnt2 PE=2 SV=1; Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=2; Isoform A2 of Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tnnt2 PE=2 SV=1; Isoform A3B of Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2; Isoform A1 of Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2; Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Troponin T, cardiac muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Tnnt2 protein OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1" 0 4 4 0.825 0 1 1 1 611.34192 2442.34585 2442.34433 0.62 0.00038 0/0 0 0 20732280 HCD 30 MS2 24.20464 1215.6 110 63.4185 18595 18595 18591 QEplus033719.raw F4 1426.8 512.9 1708.8 1044.4 626.1 1974.4 427 5.03 1 FALSE 1.14E-05 2.23E-13 2.5 -250 87085 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSVETQPAEEVRK [K].sSVETQPAEEVRk.[D] N-Term(TMT6plex); K13(TMT6plex) 13 O70318 Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2 Q811B2; B6ZHC6; O70318; B6ZHD0; Q80UE5; Q8CGJ6; Q80UE3; Q80UE4; A0A1W2P6I5; B6ZHC5; B6ZHC7; Q8C928; Q3UNQ6 Epb4.1l2 protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Epb4.1l2 protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Protein 4.1G OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1 1 3 3 0.6491 0 1 1 1 640.02673 1918.06565 1918.06458 0.56 0.00036 0/0 0 0 21505546 HCD 30 MS2 23.0696 1064.5 84.684 63.4207 18596 18596 18591 QEplus033719.raw F4 1001.4 1071.3 1258.3 660 1362.5 1033.7 487 4.36 1 FALSE 1.14E-05 5.48E-08 1.477 -250 87095 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLLGANIR [R].rLLGANIR.[V] N-Term(TMT6plex) 2 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 B9EIU1; Q8CGC7 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4 1 3 3 0.3429 0 1 1 1 381.25009 1141.73572 1141.73669 -0.85 -0.00032 0/0 0 0 16815704 HCD 30 MS2 19.77219 318.9 61.905 63.423 18597 18597 18591 QEplus033719.raw F4 316.8 239.8 339.8 264.6 342.1 410.2 124 3.47 1 FALSE 0.0005556 0.008554 0.429 -250 87105 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGLQSLGK [R].hGLQSLGk.[V] N-Term(TMT6plex); K8(TMT6plex) 11 F8WHT3; A0A0A0MQ79; Q5DTJ4 Protein PRRC2B OS=Mus musculus OX=10090 GN=Prrc2b PE=1 SV=1;Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1;MKIAA4178 protein (Fragment) OS=Mus musculus OX=10090 GN=Prrc2a PE=2 SV=1 F8WHT3; A0A0A0MQ79; S4R294; Q7TPM1; S4R2E2; S4R2J9; Q5DTJ4; Q3TLH4; S4R298; Q7TSC1; Q3TLH4-5 Protein PRRC2B OS=Mus musculus OX=10090 GN=Prrc2b PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2B OS=Mus musculus OX=10090 GN=Prrc2b PE=1 SV=1; Protein PRRC2C (Fragment) OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=2; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; MKIAA4178 protein (Fragment) OS=Mus musculus OX=10090 GN=Prrc2a PE=2 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=3; Protein PRRC2C (Fragment) OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2A OS=Mus musculus OX=10090 GN=Prrc2a PE=1 SV=1; Isoform 5 of Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c 0 3 3 0.5318 0 1 1 1 433.27026 1297.79624 1297.79924 -2.31 -0.001 0/0 0 0 14229627 HCD 30 MS2 64.22298 1061.1 73.201 63.4252 18598 18598 18591 QEplus033719.raw F4 1076.5 778 1108.4 1037.5 1058.4 1307.5 221 3.14 3 FALSE 0.0003996 0.007093 0.456 -250 87112 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANPFGGASHAK [K].aNPFGGASHAk.[G] N-Term(TMT6plex); K11(TMT6plex) 5 Q9CWI9 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1 Q497E1; Q9CSN9; Q9CWI9; Q9CZI5; P62267 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 (Fragment) OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=1 SV=3 0 2 2 0.7236 0 1 1 1 757.92853 1514.84978 1514.84798 1.19 0.0009 0/0 0 0 12394921 HCD 30 MS2 0 617.2 110 63.4278 18599 18599 18591 QEplus033719.raw F4 564.9 569 731.8 487.1 689.3 661.1 428 4.16 1 FALSE 1.14E-05 3.41E-10 1.896 -250 87126 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLEEAEEEAQR [R].qLEEAEEEAQR.[A] N-Term(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q7TQJ6; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 0 2 2 0.5317 0 1 1 1 780.88928 1560.77129 1560.7703 0.64 0.0005 0/0 0 0 8674456 HCD 30 MS2 0 346.1 110 63.4326 18601 18601 18591 QEplus033719.raw F4 345.9 334.1 395.2 254.6 383.1 363.9 125 4.42 1 FALSE 1.14E-05 4.01E-09 1.693 -250 87133 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STMKPVQK [R].sTMkPVQk.[V] N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex) 8 P20029 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q3U9G2; Q3U6V3; Q3TUS2; Q3U7T8; Q3TI47 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1 0 2 2 0.5851 0 1 1 1 803.5036 1605.99993 1605.99651 2.13 0.00171 0/0 0 0 4920124.5 HCD 30 MS2 0 297.4 110 63.4424 18604 18604 18602 QEplus033719.raw F4 315.6 204.4 315.2 355.7 306.4 287.1 329 2.82 1 FALSE 1.14E-05 0.0007187 0.691 -250 87140 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETGEHLVHVKK [K].eTGEHLVHVkk.[N] N-Term(TMT6plex); K10(TMT6plex); K11(TMT6plex) 7 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; I7HPX4; B7FAV1; F6Z2C0; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=4 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=8; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 1 5 5 0.7712 0 1 1 1 393.64404 1964.19111 1964.18961 0.76 0.0003 0/0 0 0 11317211 HCD 30 MS2 7.644559 607.5 109.235 63.4449 18605 18605 18602 QEplus033719.raw F4 614 692.3 695.4 325.3 710.7 607.1 289 5.07 1 FALSE 1.14E-05 4.08E-08 1.501 -250 87163 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGQIIPTAR [R].gGGQIIPTAR.[R] N-Term(TMT6plex) 26 Q3UMI7; Q3U5Q3 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1;116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=2 SV=1 Q3UMI7; Q3TSK4; Q8C153; P58252; Q61509; Q3TW58; G3UZ34; Q3UDC8; Q3TJZ1; Q3UBL9; Q3U5Q3; Q3TMY8; Q8BMA8; Q6P9L9; Q3TPG2; Q543F1; Q3UZ14; Q3TK17; Q99LT6; Q3TLB1; Q6A0E3; Q7TMX4; G3UXK8; Q3TWX1; Q3TX47; A2AH85 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Elongation factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=1 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=1 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component (Fragment) OS=Mus musculus OX=10090 GN=Eftud2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component (Fragment) OS=Mus musculus OX=10090 GN=Eftud2 PE=1 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=1 SV=1 0 3 3 0.6389 0 1 1 1 400.24225 1198.71219 1198.71054 1.38 0.00055 0/0 0 0 14648617 HCD 30 MS2 12.6038 442.2 110 63.4524 18608 18608 18602 QEplus033719.raw F4 525.2 321.1 443.5 371.8 486.1 505.3 238 3.24 2 FALSE 1.14E-05 3.99E-05 0.933 -250 87171 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKEEEEDK [R].lkEEEEDk.[K] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 1 B2MWM9 Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 B2MWM9 Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 1 2 2 0.4564 0 1 1 1 853.9939 1706.98052 1706.97794 1.51 0.00129 0/0 0 0 11641333 HCD 30 MS2 0 473.6 110 63.4549 18609 18609 18602 QEplus033719.raw F4 550.4 321 504.2 506.2 534.3 425.5 477 2.98 1 FALSE 1.14E-05 0.0005481 0.714 -250 87176 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVIEEHGPSEK [K].dVIEEHGPSEk.[A] N-Term(TMT6plex); K11(TMT6plex) 6 Q61584 Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1 PE=1 SV=2 Q61584; Q61584-5; Q61584-3; Q61584-6; Q61584-4; Q61584-7 Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1 PE=1 SV=2; Isoform D of Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1; Isoform B of Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1; Isoform F of Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1; Isoform C of Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1; Isoform G of Fragile X mental retardation syndrome-related protein 1 OS=Mus musculus OX=10090 GN=Fxr1 0 3 3 0.5219 0 1 1 1 566.6413 1697.90934 1697.91104 -1 -0.00057 0/0 0 0 9076651 HCD 30 MS2 6.351303 954.8 110 63.4574 18610 18610 18602 QEplus033719.raw F4 1093.6 587.5 1040.8 1017 802.8 1186.9 310 5.25 1 FALSE 1.14E-05 5.59E-07 1.285 -250 87189 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALAENSGVK [R].aLAENSGVk.[A] N-Term(TMT6plex); K9(TMT6plex) 9 Q6A0F1 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1 Q9CS06; H3BJB6; Q8BVY8; Q3UKQ2; Q9CRW7; Q6A0F1; H3BL49; P42932; Q9WVS5 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; T-complex protein 1 subunit theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1; T-complex protein 1 subunit theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=3; CCT-theta OS=Mus musculus OX=10090 GN=Cctq PE=3 SV=1 0 3 3 0.5585 0 1 1 1 449.6066 1346.80524 1346.80439 0.63 0.00028 0/0 0 0 9815759 HCD 30 MS2 48.11295 792 110 63.4624 18612 18612 18602 QEplus033719.raw F4 895.2 669.1 825.4 643.9 845.6 873 555 3.42 1 FALSE 1.14E-05 0.0002831 0.77 -250 87198 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIEALHGHELRPGR [R].aIEALHGHELRPGR.[A] N-Term(TMT6plex) 8 Q8C2Q3; F7BGR7 RNA-binding protein 14 OS=Mus musculus OX=10090 GN=Rbm14 PE=1 SV=1;Predicted gene 21992 OS=Mus musculus OX=10090 GN=Gm21992 PE=4 SV=1 Q8C2Q3; F7BGR7; J3QN51; J3QPT3; E9QL13; B0LM42; Q8C2Q3-2; Q3U6A2 RNA-binding protein 14 OS=Mus musculus OX=10090 GN=Rbm14 PE=1 SV=1; Predicted gene 21992 OS=Mus musculus OX=10090 GN=Gm21992 PE=4 SV=1; Predicted gene 21992 OS=Mus musculus OX=10090 GN=Gm21992 PE=4 SV=1; RNA-binding protein 14 OS=Mus musculus OX=10090 GN=Rbm14 PE=4 SV=1; RNA-binding protein 14 OS=Mus musculus OX=10090 GN=Rbm14 PE=1 SV=2; Predicted gene 21992 OS=Mus musculus OX=10090 GN=Gm21992 PE=2 SV=1; Isoform 2 of RNA-binding protein 14 OS=Mus musculus OX=10090 GN=Rbm14; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rbm14 PE=2 SV=1 0 5 5 0.5889 0 1 1 1 357.80765 1785.00913 1785.00812 0.57 0.0002 0/0 0 0 5303362.5 HCD 30 MS2 66.00806 184.7 110 63.4697 18614 18614 18613 QEplus033719.raw F4 171 161.9 236.1 138.9 175.7 224.6 406 4.33 2 FALSE 1.14E-05 1.66E-05 1.006 -250 87206 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVTGDNINTAR [R].mVTGDNINTAR.[A] N-Term(TMT6plex) 12 G5E829 Plasma membrane calcium-transporting ATPase 1 OS=Mus musculus OX=10090 GN=Atp2b1 PE=1 SV=1 Q0VF54; Q0VF55; Q8K314; D5L240; Q3UHH0; A2ALL9; G5E829; F8WHB1; Q3UHJ3; A0A1W2P867; S4R1C4; Q8C048 Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b3 PE=2 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b3 PE=1 SV=1; Atp2b1 protein (Fragment) OS=Mus musculus OX=10090 GN=Atp2b1 PE=2 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b2 PE=2 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b2 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b3 PE=1 SV=1; Plasma membrane calcium-transporting ATPase 1 OS=Mus musculus OX=10090 GN=Atp2b1 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b2 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b2 PE=1 SV=1; Plasma membrane calcium-transporting ATPase 1 (Fragment) OS=Mus musculus OX=10090 GN=Atp2b1 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b2 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2b3 PE=1 SV=1 0 2 2 0.3294 0 1 1 1 710.87646 1420.74565 1420.74158 2.87 0.00204 0/0 0 0 2820284 HCD 30 MS2 21.22591 110 63.4722 18615 18615 18613 QEplus033719.raw F4 234 1.7 1 FALSE 0.006816 0.1084 -0.016 -250 87212 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEYDESGPSIVHRK [K].qEYDESGPSIVHRk.[C] N-Term(TMT6plex); K14(TMT6plex) 19 Q3UAF6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q3UCF8; Q3TSB7; Q3UAF6; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; F8WGM8; Q3TIJ9; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P63260; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 1 4 4 0.6954 0 1 1 1 526.53674 2103.12514 2103.12349 0.79 0.00041 0/0 0 0 38965440 HCD 30 MS2 25.97932 565.8 39.485 63.4745 18616 18616 18613 QEplus033719.raw F4 656 618.8 568.5 402.3 848.8 300.7 416 4.76 1 FALSE 1.14E-05 7.37E-10 1.832 -250 87228 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FLQPGSQR [K].fLQPGSQR.[K] N-Term(TMT6plex) 6 P24472 Glutathione S-transferase A4 OS=Mus musculus OX=10090 GN=Gsta4 PE=1 SV=3 P13745; Q6P8Q0; P24472; Q8K0V9; Q9DCU1; P30115 Glutathione S-transferase A1 OS=Mus musculus OX=10090 GN=Gsta1 PE=1 SV=2; Glutathione S-transferase OS=Mus musculus OX=10090 GN=Gm3776 PE=2 SV=1; Glutathione S-transferase A4 OS=Mus musculus OX=10090 GN=Gsta4 PE=1 SV=3; Glutathione transferase OS=Mus musculus OX=10090 GN=Gsta5 PE=2 SV=1; Glutathione S-transferase OS=Mus musculus OX=10090 GN=Gsta3 PE=2 SV=1; Glutathione S-transferase A3 OS=Mus musculus OX=10090 GN=Gsta3 PE=1 SV=2 0 2 2 0.5511 0 1 1 1 581.33368 1161.66008 1161.65777 1.99 0.00115 0/0 0 0 15674800 HCD 30 MS2 29.60699 1141.5 83.391 63.479 18618 18618 18613 QEplus033719.raw F4 1177.1 855.2 1174.1 1072.1 1201.9 1368.5 342 2.25 1 FALSE 0.0036 0.06877 0.091 -250 87237 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAIHEVMEQGR [R].tAIHEVMEQGR.[V] N-Term(TMT6plex) 3 Q3UI57 DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=1 SV=1 Q3UI57; Q3ULD6; Q3UZH2 DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=2 SV=1 0 3 3 0.7418 0 1 1 1 500.59958 1499.78418 1499.78378 0.27 0.00014 0/0 0 0 14929611 HCD 30 MS2 22.70211 774.9 110 63.4815 18619 18619 18613 QEplus033719.raw F4 749.2 665.9 834.7 623.2 945 831.4 215 3.68 1 FALSE 1.14E-05 2.27E-05 0.98 -250 87263 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLGTPSEK [K].dLGTPSEk.[I] N-Term(TMT6plex); K8(TMT6plex) 4 Q8R190 Cdc2l1 protein (Fragment) OS=Mus musculus OX=10090 GN=Cdk11b PE=2 SV=1 Q8R190; P24788-2; A2A9P6; P24788 Cdc2l1 protein (Fragment) OS=Mus musculus OX=10090 GN=Cdk11b PE=2 SV=1; Isoform 2 of Cyclin-dependent kinase 11B OS=Mus musculus OX=10090 GN=Cdk11b; Cyclin-dependent kinase 11B OS=Mus musculus OX=10090 GN=Cdk11b PE=1 SV=1; Cyclin-dependent kinase 11B OS=Mus musculus OX=10090 GN=Cdk11b PE=1 SV=2 0 2 2 0.4026 0 1 1 1 652.87665 1304.74602 1304.7462 -0.14 -0.00009 0/0 0 0 7249155.5 HCD 30 MS2 10.4657 708.1 110 63.4888 18622 18622 18613 QEplus033719.raw F4 712.6 607.9 727.9 612.1 797.5 790.8 420 3.08 1 FALSE 1.14E-05 0.0003208 0.76 -250 87273 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDYPSSPPK [K].dDYPSSPPk.[C] N-Term(TMT6plex); K9(TMT6plex) 3 P63280 SUMO-conjugating enzyme UBC9 OS=Mus musculus OX=10090 GN=Ube2i PE=1 SV=1 P63280; G3UYP0; Q8CFZ0 SUMO-conjugating enzyme UBC9 OS=Mus musculus OX=10090 GN=Ube2i PE=1 SV=1; SUMO-conjugating enzyme UBC9 (Fragment) OS=Mus musculus OX=10090 GN=Ube2i PE=1 SV=1; SUMO-conjugating enzyme UBC9 OS=Mus musculus OX=10090 GN=Ube2i PE=1 SV=1 0 2 2 0.7147 0 1 1 1 732.39374 1463.7802 1463.77823 1.34 0.00098 0/0 0 0 5238768.5 HCD 30 MS2 0 444.1 110 63.4913 18623 18623 18613 QEplus033719.raw F4 463.1 367.7 431.1 336.2 584.5 482 337 3.12 1 FALSE 1.14E-05 1.48E-05 1.015 -250 87281 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANACNSVIK [R].aNAcNSVIk.[Q] N-Term(TMT6plex); C4(Carbamidomethyl); K9(TMT6plex) 4 O55143-2; O55143 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2 O55143-2; O55143; Q5DTI2; O54994 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; Sarcoplasmic reticulum Ca2+-ATPase (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1 0 2 2 0.2338 0 1 1 1 717.90674 1434.8062 1434.81391 -5.37 -0.00385 0/0 0 0 2636575.25 HCD 30 MS2 72.50999 542.8 110 63.4986 18625 18625 18624 QEplus033719.raw F4 535.7 313.2 513 777.7 434.2 682.7 459 2.01 2 FALSE 0.0007816 0.01084 0.391 -250 87329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLTPQAVK [R].rLTPQAVk.[I] N-Term(TMT6plex); K8(TMT6plex) 2 Q6ZWX6 Eukaryotic translation initiation factor 2 subunit 1 OS=Mus musculus OX=10090 GN=Eif2s1 PE=1 SV=3 Q9CV24; Q6ZWX6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif2s1 PE=2 SV=1; Eukaryotic translation initiation factor 2 subunit 1 OS=Mus musculus OX=10090 GN=Eif2s1 PE=1 SV=3 1 3 3 0.5582 0 1 1 1 457.63464 1370.88938 1370.88839 0.72 0.00033 0/0 0 0 16582266 HCD 30 MS2 32.69767 899.6 110 63.5129 18631 18631 18624 QEplus033719.raw F4 1022.9 729.7 981.2 739.2 939.3 985.2 135 3.78 1 FALSE 0.001456 0.02098 0.273 -250 87335 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAEEGPVEDTKPKPSR [K].dAEEGPVEDTkPkPSR.[L] N-Term(TMT6plex); K11(TMT6plex); K13(TMT6plex) 12 K3W4R7 "Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1" K3W4R7; J3QQ13; A0A087WRX3; Q3TQ90; P50752; P50752-3; Q3TH80; P50752-2; P50752-4; K3W4R6; A0A087WQP1; Q6P3Z7 "Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Troponin T, cardiac muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tnnt2 PE=2 SV=1; Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=2; Isoform A2 of Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tnnt2 PE=2 SV=1; Isoform A3B of Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2; Isoform A1 of Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2; Troponin T, cardiac muscle OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Troponin T, cardiac muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1; Tnnt2 protein OS=Mus musculus OX=10090 GN=Tnnt2 PE=1 SV=1" 0 3 3 0.7131 0 1 1 1 814.78748 2442.34787 2442.34433 1.45 0.00118 0/0 0 0 5798418.5 HCD 30 MS2 0 316.9 110 63.5154 18632 18632 18624 QEplus033719.raw F4 330.3 129.6 462.7 303.5 116.3 559.1 445 3.52 1 FALSE 1.14E-05 4.18E-09 1.689 -250 87357 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIFDSR [R].eIFDSR.[G] N-Term(TMT6plex) 5 Q5FW97; B0QZL1 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1;2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 Q8CF78; Q5FW97; B1ARR6; B0QZL1; B1ARR7 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; Alpha-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1; Alpha-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 0 2 2 0.1806 0 1 1 1 498.27231 995.53734 995.53593 1.42 0.00071 0/0 0 0 634001792 HCD 30 MS2 8.816504 668.8 2.132 63.5275 18636 18636 18635 QEplus033719.raw F4 658.4 558.1 739.6 643.5 706 706.9 157 2.27 2 FALSE 0.007082 0.1117 -0.024 -250 87362 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVEPPTKK [R].qVEPPTkk.[G] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 13 Q91VK2; Q80T06 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1;Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1 Q91VK2; P57776-2; D3Z7N2; F6ZFU0; Q80T06; A0A0R4J1E2; D3YY68; E9QN08; A0A0R4J1L2; D3YZT9; P57776-3; P57776; D3YUQ9 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 2 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 3 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=3; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=8 1 3 3 0.3933 0 1 1 1 538.67859 1614.02121 1614.01935 1.15 0.00062 0/0 0 0 20131786 HCD 30 MS2 25.09133 1488.9 110 63.53 18637 18637 18635 QEplus033719.raw F4 1642.9 1100.2 1511.4 1425.8 1652.2 1601 212 2.39 2 FALSE 0.0002019 0.004061 0.525 -250 87370 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPYCNAHYPK [K].kPYcNAHYPk.[Q] N-Term(TMT6plex); K1(TMT6plex); C4(Carbamidomethyl); K10(TMT6plex) 10 Q543N3 LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 A2A6H0; A2A6G8; Q543N3; E9Q0N6; A2A6G7; A2A6G4; A2A6G5; A2A6G6; Q9DC07; A2A6G9 LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=8; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM zinc-binding domain-containing Nebulette OS=Mus musculus OX=10090 GN=Nebl PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 0 4 4 0.5709 0 1 1 1 492.03082 1965.10146 1965.09835 1.58 0.00078 0/0 0 0 60148716 HCD 30 MS2 45.70664 943.6 23.022 63.5322 18638 18638 18635 QEplus033719.raw F4 992.9 866.8 1093.3 903.8 956.1 848.9 468 2.82 1 FALSE 0.0002518 0.005089 0.499 -250 87376 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPGYIK [K].nPGYIk.[L] N-Term(TMT6plex); K6(TMT6plex) 2 O35129 Prohibitin-2 OS=Mus musculus OX=10090 GN=Phb2 PE=1 SV=1 F6QPR1; O35129 Prohibitin (Fragment) OS=Mus musculus OX=10090 GN=Phb2 PE=1 SV=1; Prohibitin-2 OS=Mus musculus OX=10090 GN=Phb2 PE=1 SV=1 0 2 2 0.42 0 1 1 1 575.35565 1149.70403 1149.70322 0.71 0.00041 0/0 0 0 41397268 HCD 30 MS2 66.21705 1134.2 18.582 63.5345 18639 18639 18635 QEplus033719.raw F4 1170.6 913.6 1228 1013.2 1302.3 1177.5 232 2.5 1 FALSE 0.002148 0.04073 0.172 -250 87385 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELTYQSEEDRK [K].eLTYQSEEDRk.[N] N-Term(TMT6plex); K11(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 3 3 0.7505 0 1 1 1 619.33221 1855.98209 1855.98018 1.03 0.00064 0/0 0 0 32094442 HCD 30 MS2 0 1447.6 62.96 63.5368 18640 18640 18635 QEplus033719.raw F4 1966.3 238.4 1078.9 2921.2 264.6 2216.1 346 5.37 1 FALSE 1.14E-05 1.38E-11 2.161 -250 87391 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YQDTPGVK [R].yQDTPGVk.[M] N-Term(TMT6plex); K8(TMT6plex) 5 Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1;ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TED3; Q3UEA1; Q3UVY4; Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate (pro-S-)-lyase (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 0 2 2 0.5294 0 1 1 1 683.39337 1365.77947 1365.77784 1.19 0.00081 0/0 0 0 23429986 HCD 30 MS2 16.73347 1151.6 81.701 63.539 18641 18641 18635 QEplus033719.raw F4 1142 1239.3 1371.8 848.4 1208.3 1099.6 450 3.06 2 FALSE 1.14E-05 0.0002027 0.798 -250 87400 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEYDESGPSIVHRK [K].qEYDESGPSIVHRk.[C] N-Term(TMT6plex); K14(TMT6plex) 19 Q3UAF6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q3UCF8; Q3TSB7; Q3UAF6; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; F8WGM8; Q3TIJ9; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P63260; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 1 3 3 0.7797 0 1 1 1 701.71326 2103.12522 2103.12349 0.82 0.00058 0/0 0 0 18767326 HCD 30 MS2 0 748.6 110 63.5416 18642 18642 18635 QEplus033719.raw F4 876 858 700.8 522.8 1199.8 334.3 416 5.22 1 FALSE 1.14E-05 1.61E-15 2.907 -250 87409 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDVDIRK [K].cDVDIRk.[D] N-Term(TMT6plex); C1(Carbamidomethyl); K7(TMT6plex) 23 O89054; Q3UAF6 Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q8BFZ3; Q3UCF8; Q3TSB7; Q9QZ83; O89054; Q3UAF6; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; F8WGM8; Q99NC5; Q3TIJ9; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P63260; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 1 3 3 0.2834 0 1 1 1 455.2637 1363.77655 1363.77679 -0.17 -0.00008 0/0 0 0 18538790 HCD 30 MS2 35.09864 867 60.455 63.5438 18643 18643 18635 QEplus033719.raw F4 997.4 738.5 861.7 688.5 1091.7 824.4 482 1.87 2 FALSE 0.003182 0.06259 0.107 -250 87416 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FATEEK [K].fATEEk.[R] N-Term(TMT6plex); K6(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.2233 0 1 1 1 591.84302 1182.67876 1182.67706 1.44 0.00085 0/0 0 0 16912906 HCD 30 MS2 15.33549 1488.8 110 63.5463 18644 18644 18635 QEplus033719.raw F4 1708 566.5 1276.8 2336 752 2293.2 225 2.15 2 FALSE 0.00557 0.09409 0.023 -250 87425 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLSESQVK [K].qLSESQVk.[S] N-Term(TMT6plex); K8(TMT6plex) 1 P63330 Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Mus musculus OX=10090 GN=Ppp2ca PE=1 SV=1 P63330 Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Mus musculus OX=10090 GN=Ppp2ca PE=1 SV=1 0 3 3 0.3944 0 1 1 1 459.61069 1376.81751 1376.81495 1.86 0.00085 0/0 0 0 16863158 HCD 30 MS2 21.62611 654.4 49.194 63.5486 18645 18645 18635 QEplus033719.raw F4 716.5 548.7 675.1 563.7 766.7 655.9 391 3.22 1 FALSE 0.0003996 0.007034 0.457 -250 87435 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANSEVAQWR [K].aNSEVAQWR.[T] N-Term(TMT6plex) 13 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; B2RWX0; B2RQQ1; I6L963; B1AR69; B2RY26; B2RXX9; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 3 3 0.1732 0 1 1 1 430.56528 1289.68128 1289.67996 1.02 0.00044 0/0 0 0 12577633 HCD 30 MS2 79.13844 675.8 46.539 63.5559 18647 18647 18646 QEplus033719.raw F4 638.9 511.5 749.5 641 707 807.1 263 2.54 5 FALSE 0.0008991 0.01237 0.368 -250 87440 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVQSQGFK [K].sVQSQGFk.[L] N-Term(TMT6plex); K8(TMT6plex) 2 Q543P7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Arl3 PE=1 SV=1 Q543P7; A0A494BAJ6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Arl3 PE=1 SV=1; ADP-ribosylation factor-like protein 3 OS=Mus musculus OX=10090 GN=Arl3 PE=1 SV=1 0 2 2 0.6135 0 1 1 1 669.89453 1338.78179 1338.77817 2.7 0.00181 0/0 0 0 18812182 HCD 30 MS2 9.088561 1152.5 110 63.5584 18648 18648 18646 QEplus033719.raw F4 1145.2 1113.3 1237.9 932.7 1388.6 1097.2 298 3.26 1 FALSE 1.14E-05 0.0002258 0.789 -250 87447 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLSESQVK [K].qLSESQVk.[S] N-Term(TMT6plex); K8(TMT6plex) 1 P63330 Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Mus musculus OX=10090 GN=Ppp2ca PE=1 SV=1 P63330 Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Mus musculus OX=10090 GN=Ppp2ca PE=1 SV=1 0 2 2 0.3952 0 1 1 1 688.91199 1376.8167 1376.81495 1.27 0.00087 0/0 0 0 44170184 HCD 30 MS2 4.923059 873.2 39.523 63.5607 18649 18649 18646 QEplus033719.raw F4 936.6 755.6 928.1 726.7 1016.4 876 421 3.34 1 FALSE 1.14E-05 0.0002753 0.773 -250 87457 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSQAALPK [K].dSQAALPk.[Y] N-Term(TMT6plex); K8(TMT6plex) 5 A0A0R4J1E3 Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1 F7CPL2; Q9QXS6-3; Q9QXS6; A0A0R4J1E3; Q9QXS6-2 Drebrin (Fragment) OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1; Isoform E2 of Drebrin OS=Mus musculus OX=10090 GN=Dbn1; Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=4; Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1; Isoform A2 of Drebrin OS=Mus musculus OX=10090 GN=Dbn1 0 3 3 0.3068 0 1 1 1 429.92758 1287.76819 1287.76727 0.71 0.00031 0/0 0 0 22514460 HCD 30 MS2 30.49164 606.4 46.638 63.5629 18650 18650 18646 QEplus033719.raw F4 589.3 498.7 629.2 555.5 623.8 742.1 428 1.76 1 FALSE 0.0099 0.1951 -0.13 -250 87464 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELPSGKK [K].eLPSGkk.[Y] N-Term(TMT6plex); K6(TMT6plex); K7(TMT6plex) 5 O08709 Peroxiredoxin-6 OS=Mus musculus OX=10090 GN=Prdx6 PE=1 SV=3 Q6GT24; D3Z0Y2; O08709; Q8BPD3; Q6A0D0 Peroxiredoxin-6 OS=Mus musculus OX=10090 GN=Prdx6 PE=1 SV=1; Peroxiredoxin-6 OS=Mus musculus OX=10090 GN=Prdx6 PE=1 SV=1; Peroxiredoxin-6 OS=Mus musculus OX=10090 GN=Prdx6 PE=1 SV=3; 1-cysPrx_C domain-containing protein OS=Mus musculus OX=10090 GN=Prdx6 PE=2 SV=1; MKIAA0106 protein (Fragment) OS=Mus musculus OX=10090 GN=Prdx6 PE=2 SV=1 1 3 3 0.3294 0 1 1 1 482.64847 1445.93085 1445.92948 0.95 0.00046 0/0 0 0 17930696 HCD 30 MS2 60.20232 1745.1 110 63.5654 18651 18651 18646 QEplus033719.raw F4 2487.3 1287.5 1874 1577 1687.8 1557.2 266 1.7 1 FALSE 0.008863 0.1578 -0.096 -250 87501 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGSVATCQAVMR [R].aGSVATcQAVMR.[A] N-Term(TMT6plex); C7(Carbamidomethyl) 2 Q91YR7 Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1 Q91YR7; Q91YR7-2 Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1; Isoform 2 of Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 0 2 2 0.7249 0 1 1 1 740.38544 1479.7636 1479.76093 1.8 0.00133 0/0 0 0 5833326 HCD 30 MS2 0 324.4 110 63.5775 18656 18656 18646 QEplus033719.raw F4 317.3 310.4 359.3 277.8 338.4 343.3 232 4.18 1 FALSE 1.14E-05 1.61E-11 2.148 -250 87518 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKDDATLSGK [K].akDDATLSGk.[R] N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex) 2 B2RTB0 PDGFA associated protein 1 OS=Mus musculus OX=10090 GN=Pdap1 PE=1 SV=1 Q1WWJ8; B2RTB0 Pdap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Pdap1 PE=2 SV=1; PDGFA associated protein 1 OS=Mus musculus OX=10090 GN=Pdap1 PE=1 SV=1 1 3 3 0.5524 0 1 1 1 565.00873 1693.01163 1693.00991 1.02 0.00057 0/0 0 0 53700676 HCD 30 MS2 8.218616 1082.5 31.943 63.5871 18659 18659 18657 QEplus033719.raw F4 1239.4 825.3 1040.7 1021.8 1382.5 985.3 390 3.82 1 FALSE 1.14E-05 3.58E-08 1.512 -250 87533 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTAAFQQGK [K].tTAAFQQGk.[I] N-Term(TMT6plex); K9(TMT6plex) 3 Q569X3 U1 small nuclear ribonucleoprotein C OS=Mus musculus OX=10090 GN=Snrpc PE=1 SV=1 Q569X3; A0A3B2W450; A0A3B2WCR6 U1 small nuclear ribonucleoprotein C OS=Mus musculus OX=10090 GN=Snrpc PE=1 SV=1; U1 small nuclear ribonucleoprotein C OS=Mus musculus OX=10090 GN=Snrpc PE=1 SV=1; U1 small nuclear ribonucleoprotein C OS=Mus musculus OX=10090 GN=Snrpc PE=1 SV=1 0 2 2 0.6272 0 1 1 1 705.41156 1409.81584 1409.81529 0.4 0.00028 0/0 0 0 40986048 HCD 30 MS2 15.20498 1012.3 58.468 63.5916 18661 18661 18657 QEplus033719.raw F4 1041.9 989.1 1119.7 698.8 1260.2 964.2 391 3.97 1 FALSE 1.14E-05 1.90E-06 1.185 -250 87542 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTMNEGEPAIYAER [K].hTMNEGEPAIYAER.[A] N-Term(TMT6plex) 3 Q3ULB1 Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1 Q99L61; Q3ULB1; Q921W7 Testin OS=Mus musculus OX=10090 GN=Tes PE=2 SV=1; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=1; Testin OS=Mus musculus OX=10090 GN=Tes PE=1 SV=2 0 3 3 0.8407 0 1 1 1 616.3042 1846.89804 1846.89551 1.37 0.00084 0/0 0 0 13212106 HCD 30 MS2 45.78566 739.6 110 63.5941 18662 18662 18657 QEplus033719.raw F4 776.2 546.3 736.4 867 668.8 843.1 128 6.09 1 FALSE 1.14E-05 1.17E-11 2.174 -250 87550 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELTYQSEEDRK [K].eLTYQSEEDRk.[N] N-Term(TMT6plex); K11(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 2 2 0.6993 0 1 1 1 928.49493 1855.98259 1855.98018 1.3 0.00121 0/0 0 0 7318885 HCD 30 MS2 0 252.7 110 63.5967 18663 18663 18657 QEplus033719.raw F4 316 41 188 539.6 36.4 395.2 348 4.29 1 FALSE 1.14E-05 3.21E-09 1.711 -250 87555 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAQEEETEK [R].lAQEEETEk.[L] N-Term(TMT6plex); K9(TMT6plex) 2 A0A494B9J0 Ankyrin repeat domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ankrd2 PE=1 SV=1 A0A494B9J0; Q9WV06 Ankyrin repeat domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ankrd2 PE=1 SV=1; Ankyrin repeat domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ankrd2 PE=1 SV=3 0 2 2 0.6547 0 1 1 1 767.92163 1534.83599 1534.83647 -0.32 -0.00024 0/0 0 0 5381088 HCD 30 MS2 15.80549 554.5 110 63.5992 18664 18664 18657 QEplus033719.raw F4 503.9 229.5 706.6 653.8 277.1 956.2 332 3.62 1 FALSE 1.14E-05 1.46E-06 1.206 -250 87562 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTSMSTQTK [K].vTSMSTQTk.[V] N-Term(TMT6plex); K9(TMT6plex) 2 Q8BJF9 Charged multivesicular body protein 2b OS=Mus musculus OX=10090 GN=Chmp2b PE=1 SV=1 A0A338P7L8; Q8BJF9 Charged multivesicular body protein 2b OS=Mus musculus OX=10090 GN=Chmp2b PE=1 SV=1; Charged multivesicular body protein 2b OS=Mus musculus OX=10090 GN=Chmp2b PE=1 SV=1 0 2 2 0.5767 0 1 1 1 720.91138 1440.81548 1440.81324 1.56 0.00112 0/0 0 0 6905118 HCD 30 MS2 0 529.9 110 63.6017 18665 18665 18657 QEplus033719.raw F4 514.6 513.9 585.9 426.1 634.2 504.5 349 3.52 1 FALSE 1.14E-05 1.37E-06 1.212 -250 87571 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPYCNAHYPK [K].kPYcNAHYPk.[Q] N-Term(TMT6plex); K1(TMT6plex); C4(Carbamidomethyl); K10(TMT6plex) 10 Q543N3 LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 A2A6H0; A2A6G8; Q543N3; E9Q0N6; A2A6G7; A2A6G4; A2A6G5; A2A6G6; Q9DC07; A2A6G9 LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=8; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM zinc-binding domain-containing Nebulette OS=Mus musculus OX=10090 GN=Nebl PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 0 3 3 0.6487 0 1 1 1 655.70447 1965.09885 1965.09835 0.25 0.00017 0/0 0 0 3447770.75 HCD 30 MS2 32.45739 620.2 110 63.6042 18666 18666 18657 QEplus033719.raw F4 552.9 618.6 702.3 485.7 717.6 644.3 480 4.27 1 FALSE 1.14E-05 2.75E-07 1.344 -250 87577 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGLHNLR [K].iGLHNLR.[F] N-Term(TMT6plex) 3 Q9JL41 ATP-binding cassette protein (Fragment) OS=Mus musculus OX=10090 GN=Abcc1 PE=2 SV=1 Q9JL41; O35379; Q8C7V6 ATP-binding cassette protein (Fragment) OS=Mus musculus OX=10090 GN=Abcc1 PE=2 SV=1; Multidrug resistance-associated protein 1 OS=Mus musculus OX=10090 GN=Abcc1 PE=1 SV=1; ABC-type glutathione-S-conjugate transporter (Fragment) OS=Mus musculus OX=10090 GN=Abcc1 PE=2 SV=1 0 3 3 0.2628 0 1 1 1 351.22339 1051.65561 1051.65738 -1.68 -0.00059 0/0 0 0 3880233.75 HCD 30 MS2 23.80315 249.2 110 63.6067 18667 18667 18657 QEplus033719.raw F4 235.6 211.3 308.5 178 266.5 295.1 49 3.31 1 FALSE 0.001028 0.01337 0.354 -250 87585 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVQFEENGRK [K].tVQFEENGRk.[E] N-Term(TMT6plex); K10(TMT6plex) 6 Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 Q3UJP4; E9Q133; Q3U0I3; Q3TBM6; Q3U4U6; F6Q609 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; T-complex protein 1 subunit gamma (Fragment) OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=8 1 3 3 0.4249 0 1 1 1 555.97998 1665.92539 1665.93244 -4.23 -0.00235 0/0 0 0 35787452 HCD 30 MS2 9.691897 923.8 31.26 63.614 18669 18669 18668 QEplus033719.raw F4 899.1 781 1061.9 817.3 902.8 1081 431 3.46 1 FALSE 1.14E-05 4.93E-06 1.106 -250 87604 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVQFEENGRK [K].tVQFEENGRk.[E] N-Term(TMT6plex); K10(TMT6plex) 6 Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 Q3UJP4; E9Q133; Q3U0I3; Q3TBM6; Q3U4U6; F6Q609 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; T-complex protein 1 subunit gamma (Fragment) OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=8 1 3 3 0.4755 0 1 1 1 555.97998 1665.92539 1665.93244 -4.23 -0.00235 0/0 0 0 35787452 HCD 30 MS2 9.691897 923.8 24.528 63.621 18672 18672 18668 QEplus033719.raw F4 899.1 781 1061.9 817.3 902.8 1081 431 3.68 1 FALSE 1.14E-05 6.04E-06 1.089 -250 87622 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQCVPK [R].vQcVPk.[E] N-Term(TMT6plex); C3(Carbamidomethyl); K6(TMT6plex) 4 Q9JK81 MYG1 exonuclease OS=Mus musculus OX=10090 GN=Myg1 PE=1 SV=1 Q8R038; F8WGG3; F7A3N3; Q9JK81 Melanocyte proliferating gene 1 OS=Mus musculus OX=10090 GN=Myg1 PE=2 SV=1; MYG1 exonuclease (Fragment) OS=Mus musculus OX=10090 GN=Myg1 PE=1 SV=1; MYG1 exonuclease (Fragment) OS=Mus musculus OX=10090 GN=Myg1 PE=1 SV=1; MYG1 exonuclease OS=Mus musculus OX=10090 GN=Myg1 PE=1 SV=1 0 2 2 0.4108 0 1 1 1 594.86255 1188.71782 1188.71749 0.28 0.00017 0/0 0 0 15049102 HCD 30 MS2 55.67695 1770.6 106.967 63.6258 18674 18674 18668 QEplus033719.raw F4 1837.3 1552.3 1822 1360.4 2232.2 1819.5 318 2.41 1 FALSE 0.005324 0.09082 0.032 -250 87628 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQLPADECNK [K].dQLPADEcNk.[L] N-Term(TMT6plex); C8(Carbamidomethyl); K10(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 0 2 2 0.7199 0 1 1 1 824.42523 1647.84319 1647.84124 1.18 0.00097 0/0 0 0 9933451 HCD 30 MS2 33.84473 703.6 110 63.6283 18675 18675 18668 QEplus033719.raw F4 791.3 498.3 820.1 668.4 643.1 800.2 231 3.57 1 FALSE 1.14E-05 1.49E-07 1.395 -250 87641 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDKDTIEK [R].dDkDTIEk.[L] N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex) 7 Q9D859 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rac1 PE=2 SV=1 Q9D859; Q3TLP8; Q8BPG5; Q8C4N8; Q05144; K7Q7T7; A0A2R8VHH0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rac1 PE=2 SV=1; Ras-related C3 botulinum toxin substrate 1 OS=Mus musculus OX=10090 GN=Rac1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rac1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rac1 PE=2 SV=1; Ras-related C3 botulinum toxin substrate 2 OS=Mus musculus OX=10090 GN=Rac2 PE=1 SV=1; RAS-related C3 botulinum substrate 1 OS=Mus musculus OX=10090 GN=Rac1 PE=1 SV=1; Ras-related C3 botulinum toxin substrate 2 (Fragment) OS=Mus musculus OX=10090 GN=Rac2 PE=1 SV=1 1 3 3 0.3744 0 1 1 1 550.98907 1650.95267 1650.95173 0.57 0.00031 0/0 0 0 24984750 HCD 30 MS2 25.66625 1244.4 67.176 63.6331 18677 18677 18668 QEplus033719.raw F4 1226.1 1019.3 1292.7 1275.3 1359.7 1293.1 442 2.27 1 FALSE 1.14E-05 0.0001868 0.805 -250 87649 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSYVGDEAQSK [KR].dSYVGDEAQSk.[RT] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q3TG92; I6L9D2; Q8CF71; P63268; Q61274; V9GXQ2; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Predicted gene 17087 OS=Mus musculus OX=10090 GN=Gm17087 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 3 3 0.6278 0 1 1 1 552.95526 1656.85123 1656.8481 1.89 0.00104 0/0 0 0 13316937 HCD 30 MS2 59.16642 1186.3 95.27 63.6353 18678 18678 18668 QEplus033719.raw F4 1198.7 1047.4 1307.8 1022.4 1349.1 1192.1 243 3.17 4 FALSE 0.0002119 0.004379 0.517 -250 87693 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMPTSGALDR [R].sMPTSGALDR.[V] N-Term(TMT6plex) 6 Q66JR7 Pgm2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1 A2CEK3; Q66JR7; Q9D0F9; Q3U6X6; Q5RJV4; Q7TNU0 Phosphoglucomutase-1 OS=Mus musculus OX=10090 GN=Pgm1 PE=1 SV=1; Pgm2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1; Phosphoglucomutase-1 OS=Mus musculus OX=10090 GN=Pgm1 PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1; Phosphoglucomutase 2 OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1; Pgm2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1 0 2 2 0.6081 0 1 1 1 632.33234 1263.6574 1263.65645 0.75 0.00047 0/0 0 0 32231758 HCD 30 MS2 42.82921 1288.2 58.102 63.652 18684 18684 18679 QEplus033719.raw F4 1267.1 933.9 1245.8 1346.3 1519.8 1416.1 244 3.93 1 FALSE 1.14E-05 5.94E-08 1.47 -250 87701 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNQIFVR [K].gNQIFVR.[N] N-Term(TMT6plex) 8 A2ATP6 Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=2 A2ATP6; A7UQY4; Q8C854-3; F6XJA1; A2ATP5; G8JL68; Q8C854; Q8C854-2 Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Isoform 2 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2; Myelin expression factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Isoform 4 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 0 2 2 0.4457 0 1 1 1 531.81689 1062.62651 1062.62574 0.72 0.00038 0/0 0 0 17752116 HCD 30 MS2 24.06578 1501.7 103.206 63.6543 18685 18685 18679 QEplus033719.raw F4 1585.8 1211.4 1568.1 1179.6 1781.5 1684 219 1.84 1 FALSE 0.005074 0.0874 0.041 -250 87711 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVYSEETLR [R].gVYSEETLR.[A] N-Term(TMT6plex) 13 Q8CAQ8 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; A6H604; Q3U7N2; Q6P8Y5; Q8CAQ8; Q8CAQ8-2; Q3TVZ5; Q2YDW0; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5; A0A0U1RQ14 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 0 2 2 0.6964 0 1 1 1 641.84631 1282.68535 1282.68405 1.02 0.00065 0/0 0 0 15959538 HCD 30 MS2 26.63111 1185.4 110 63.6591 18687 18687 18679 QEplus033719.raw F4 1105.1 982 1329.3 1317.8 1187 1191.2 211 3.59 1 FALSE 1.14E-05 2.99E-06 1.147 -250 87719 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LNTAEDAK [K].lNTAEDAk.[D] N-Term(TMT6plex); K8(TMT6plex) 8 Q6ZPH4 MKIAA1835 protein (Fragment) OS=Mus musculus OX=10090 GN=Rangap1 PE=2 SV=1 Q6ZPH4; A0A2R8W753; Q91YS2; P46061; Q7TMW1; A0A2R8VHK9; Q3ULJ9; Q8C2E3 MKIAA1835 protein (Fragment) OS=Mus musculus OX=10090 GN=Rangap1 PE=2 SV=1; Ran GTPase-activating protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Rangap1 PE=1 SV=1; Rangap1 protein OS=Mus musculus OX=10090 GN=Rangap1 PE=2 SV=1; Ran GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Rangap1 PE=1 SV=2; Rangap1 protein OS=Mus musculus OX=10090 GN=Rangap1 PE=2 SV=1; Ran GTPase-activating protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Rangap1 PE=1 SV=1; RanGAP1_C domain-containing protein OS=Mus musculus OX=10090 GN=Rangap1 PE=2 SV=1; RanGAP1_C domain-containing protein OS=Mus musculus OX=10090 GN=Rangap1 PE=2 SV=1 0 2 2 0.5642 0 1 1 1 660.38361 1319.75994 1319.7571 2.15 0.00142 0/0 0 0 12330695 HCD 30 MS2 15.87452 1105.2 110 63.6616 18688 18688 18679 QEplus033719.raw F4 1181.9 835 1041 815 1711.7 1046.3 520 3.35 1 FALSE 1.14E-05 9.32E-05 0.863 -250 87726 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPDSNLDQCK [K].tPDSNLDQck.[-] N-Term(TMT6plex); C9(Carbamidomethyl); K10(TMT6plex) 2 Q3UTL4 AA_permease_C domain-containing protein OS=Mus musculus OX=10090 GN=Slc7a1 PE=2 SV=1 Q3UTL4; Q3UGD6 "AA_permease_C domain-containing protein OS=Mus musculus OX=10090 GN=Slc7a1 PE=2 SV=1; Solute carrier family 7 (Cationic amino acid transporter, y+ system), member 1 OS=Mus musculus OX=10090 GN=Slc7a1 PE=1 SV=1" 0 2 2 0.1405 0 1 1 1 818.42566 1635.84404 1635.84124 1.71 0.0014 0/0 0 0 7375424 HCD 30 MS2 0 418.5 110 63.6642 18689 18689 18679 QEplus033719.raw F4 427.7 365.5 433.6 371.9 467.4 444.6 264 2.99 1 FALSE 1.14E-05 2.64E-05 0.967 -250 87733 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEYDESGPSIVHRK [K].qEYDESGPSIVHRk.[C] N-Term(TMT6plex); K14(TMT6plex) 19 Q3UAF6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q3UCF8; Q3TSB7; Q3UAF6; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; F8WGM8; Q3TIJ9; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P63260; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 1 2 2 0.7021 0 1 1 1 1052.06812 2103.12895 2103.12349 2.6 0.00273 0/0 0 0 6226400 HCD 30 MS2 0 154.4 110 63.6715 18691 18691 18690 QEplus033719.raw F4 181.9 181.8 144 99.8 273.7 45.1 416 4.33 1 FALSE 1.14E-05 5.85E-10 1.851 -250 87746 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVHAIK [R].mVHAIk.[M] N-Term(TMT6plex); K6(TMT6plex) 4 Q3TIJ5 Ribosome biogenesis protein BOP1 OS=Mus musculus OX=10090 GN=Bop1 PE=2 SV=1 Q3TIJ5; Q3THV0; P97452; Q3TJZ5 Ribosome biogenesis protein BOP1 OS=Mus musculus OX=10090 GN=Bop1 PE=2 SV=1; Ribosome biogenesis protein BOP1 OS=Mus musculus OX=10090 GN=Bop1 PE=2 SV=1; Ribosome biogenesis protein BOP1 OS=Mus musculus OX=10090 GN=Bop1 PE=1 SV=1; Ribosome biogenesis protein BOP1 OS=Mus musculus OX=10090 GN=Bop1 PE=2 SV=1 0 3 3 0.5099 0 1 1 1 386.24698 1156.72638 1156.72766 -1.1 -0.00042 0/0 0 0 12522982 HCD 30 MS2 19.90541 611.9 110 63.6788 18694 18694 18690 QEplus033719.raw F4 625.1 487.9 664 489.3 751.9 653.2 177 3.02 1 FALSE 5.44E-05 0.001834 0.607 -250 87749 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYCNDQSTGDIK [K].sYcNDQSTGDIk.[V] N-Term(TMT6plex); C3(Carbamidomethyl); K12(TMT6plex) 2 P00493 Hypoxanthine-guanine phosphoribosyltransferase OS=Mus musculus OX=10090 GN=Hprt1 PE=1 SV=3 P00493; Q99KF5 Hypoxanthine-guanine phosphoribosyltransferase OS=Mus musculus OX=10090 GN=Hprt1 PE=1 SV=3; Hypoxanthine phosphoribosyltransferase OS=Mus musculus OX=10090 GN=Hprt PE=2 SV=1 0 2 2 0.8402 0 1 1 1 923.45911 1845.91094 1845.9053 3.05 0.00282 0/0 0 0 2434422.75 HCD 30 MS2 0 356.2 110 63.6813 18695 18695 18690 QEplus033719.raw F4 380.8 342 387.9 294.4 427.9 304 161 5.07 1 FALSE 1.14E-05 7.03E-12 2.216 -250 87755 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQVDQLTNDK [R].rQVDQLTNDk.[A] N-Term(TMT6plex); K10(TMT6plex) 9 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 1 3 3 0.6063 0 1 1 1 558.99023 1674.95615 1674.9539 1.34 0.00075 0/0 0 0 45210924 HCD 30 MS2 21.62272 824.4 42.282 63.6836 18696 18696 18690 QEplus033719.raw F4 781.3 789.8 923.8 633.4 948.8 869.6 520 4.42 2 FALSE 1.14E-05 9.70E-09 1.62 -250 87760 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTVIATGGYGR [K].nTVIATGGYGR.[T] N-Term(TMT6plex) 1 Q8K2B3 "Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Mus musculus OX=10090 GN=Sdha PE=1 SV=1" Q8K2B3 "Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Mus musculus OX=10090 GN=Sdha PE=1 SV=1" 0 2 2 0.5081 0 1 1 1 669.37341 1337.73955 1337.73748 1.55 0.00104 0/0 0 0 32378070 HCD 30 MS2 18.92467 917 57.181 63.6859 18697 18697 18690 QEplus033719.raw F4 922.2 825.5 1013.2 879.9 919.3 941.6 347 3.72 1 FALSE 1.14E-05 3.11E-09 1.713 -250 87770 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GATPYGGVK [R].gATPYGGVk.[L] N-Term(TMT6plex); K9(TMT6plex) 2 Q3TQP7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Acat1 PE=2 SV=1 Q3TQP7; Q8QZT1 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Acat1 PE=2 SV=1; Acetyl-CoA acetyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Acat1 PE=1 SV=1" 0 2 2 0.5553 0 1 1 1 654.39093 1307.77458 1307.77236 1.7 0.00111 0/0 0 0 22221808 HCD 30 MS2 10.87922 1527.6 110 63.6884 18698 18698 18690 QEplus033719.raw F4 1597.6 1100.5 1633.6 1782.4 1238.4 1813 426 3.71 1 FALSE 1.14E-05 2.73E-06 1.154 -250 87783 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILGPHK [R].iLGPHk.[LH] N-Term(TMT6plex); K6(TMT6plex) 5 A0A3Q4EC50 COMM domain-containing protein 10 OS=Mus musculus OX=10090 GN=Commd10 PE=1 SV=1 A0A3Q4EHW7; A0A3Q4EC50; Q3UTM6; Q8JZY2; A0A3Q4EHG2 COMM domain-containing protein 10 OS=Mus musculus OX=10090 GN=Commd10 PE=1 SV=1; COMM domain-containing protein 10 OS=Mus musculus OX=10090 GN=Commd10 PE=1 SV=1; COMM domain-containing protein 10 OS=Mus musculus OX=10090 GN=Commd10 PE=1 SV=1; COMM domain-containing protein 10 OS=Mus musculus OX=10090 GN=Commd10 PE=1 SV=1; COMM domain-containing protein 10 OS=Mus musculus OX=10090 GN=Commd10 PE=1 SV=1 0 3 3 0.4158 0 1 1 1 374.91849 1122.74091 1122.73994 0.87 0.00032 0/0 0 0 8727951 HCD 30 MS2 28.38947 541.3 110 63.6934 18700 18700 18690 QEplus033719.raw F4 587.3 488.1 559.8 497.8 581.3 533.5 16 3.03 1 FALSE 0.001169 0.01564 0.325 -250 87807 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TENNDHINLK [K].tENNDHINLk.[V] N-Term(TMT6plex); K10(TMT6plex) 3 P61957 Small ubiquitin-related modifier 2 OS=Mus musculus OX=10090 GN=Sumo2 PE=1 SV=1 H7BWX9; D3Z794; P61957 Small ubiquitin-related modifier 2 OS=Mus musculus OX=10090 GN=Sumo2 PE=1 SV=1; Small ubiquitin-related modifier 2 OS=Mus musculus OX=10090 GN=Sumo2 PE=1 SV=1; Small ubiquitin-related modifier 2 OS=Mus musculus OX=10090 GN=Sumo2 PE=1 SV=1 0 3 3 0.5076 0 1 1 1 552.64233 1655.91245 1655.9117 0.45 0.00025 0/0 0 0 13022584 HCD 30 MS2 32.24308 1232.4 94.78 63.7052 18704 18704 18701 QEplus033719.raw F4 1310.3 1109.9 1306.3 973.9 1528.7 1165 347 3.27 1 FALSE 1.14E-05 7.80E-05 0.878 -250 87824 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSPGGPGTAGFPGGR [R].gSPGGPGTAGFPGGR.[G] N-Term(TMT6plex) 8 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; A0A087WPS3; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen alpha-1(III) chain (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 3 3 0.5143 0 1 1 1 500.93088 1500.77808 1500.77566 1.62 0.00081 0/0 0 0 7272932 HCD 30 MS2 53.7979 798.1 110 63.7102 18706 18706 18701 QEplus033719.raw F4 778.1 706 907.3 632.2 860.8 904.3 207 5.23 1 FALSE 1.14E-05 2.19E-07 1.362 -250 87852 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQELEAK [K].aQELEAk.[M] N-Term(TMT6plex); K7(TMT6plex) 1 Q3V1X4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Surf6 PE=2 SV=1 Q3V1X4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Surf6 PE=2 SV=1 0 2 2 0.1313 0 1 1 1 623.87482 1246.74236 1246.74072 1.31 0.00082 0/0 0 0 9627999 HCD 30 MS2 60.64201 1562.1 110 63.7198 18710 18710 18701 QEplus033719.raw F4 1687.2 1248.3 1558.4 1353.3 1862.2 1663.2 584 1.98 1 FALSE 0.001591 0.0245 0.248 -250 87862 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SKFEEVER [R].skFEEVER.[S] N-Term(TMT6plex); K2(TMT6plex) 3 Q3U518 Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=2 SV=1 Q3U518; Q3TWG2; O08795-2 Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=2 SV=1; Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=2 SV=1; Isoform 2 of Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh 1 2 2 0.6414 0 1 1 1 741.42255 1481.83782 1481.83641 0.95 0.0007 0/0 0 0 9458846 HCD 30 MS2 26.5906 483 110 63.7223 18711 18711 18701 QEplus033719.raw F4 491.4 421.6 550 415 522.3 497.7 412 2.9 1 FALSE 1.14E-05 0.0007895 0.683 -250 87868 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEDKEEDLK [R].qEDkEEDLk.[K] N-Term(TMT6plex); K4(TMT6plex); K9(TMT6plex) 5 A4FUS0 Eif2b3 protein OS=Mus musculus OX=10090 GN=Eif2b3 PE=2 SV=1 A4FUS0; B1AUN2; Q3UKV0; B1AUN3; A0AUM9 "Eif2b3 protein OS=Mus musculus OX=10090 GN=Eif2b3 PE=2 SV=1; Eukaryotic translation initiation factor 2B, subunit 3 OS=Mus musculus OX=10090 GN=Eif2b3 PE=1 SV=1; Eukaryotic translation initiation factor 2B, subunit 3 OS=Mus musculus OX=10090 GN=Eif2b3 PE=1 SV=1; Eukaryotic translation initiation factor 2B, subunit 3 OS=Mus musculus OX=10090 GN=Eif2b3 PE=1 SV=1; Eif2b3 protein OS=Mus musculus OX=10090 GN=Eif2b3 PE=2 SV=2" 1 3 3 0.2374 0 1 1 1 607.67828 1821.0203 1821.02087 -0.31 -0.00019 0/0 0 0 10463545 HCD 30 MS2 38.21542 1010.9 110 63.7296 18713 18713 18712 QEplus033719.raw F4 1026.1 907.4 1105.6 862.1 1041.8 1122.3 448 1.98 1 FALSE 0.001231 0.01663 0.314 -250 87883 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVCDIPPR [K].tAVcDIPPR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 9 Q7TMM9; P99024; P68372; Q9CWF2 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1 Q7TMM9; Q9D6F9; Q62363; Q80ZV2; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2 "Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Beta-tubulin gene M-beta-2, 3' end (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1" 0 2 2 0.6611 0 1 1 1 629.34534 1257.6834 1257.68227 0.89 0.00056 0/0 0 0 57506924 HCD 30 MS2 5.711602 766.7 41.85 63.7344 18715 18715 18712 QEplus033719.raw F4 786.7 705.2 826.3 577.8 960.1 744.3 232 3.01 4 FALSE 1.14E-05 0.0002665 0.775 -250 87891 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGHAVGDIPGVR [R].kGHAVGDIPGVR.[F] N-Term(TMT6plex); K1(TMT6plex) 5 Q9CWI9 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1 Q497E1; Q9CSN9; Q9CWI9; Q9CZI5; P62267 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 (Fragment) OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=1 SV=3 1 4 4 0.6564 0 1 1 1 416.7561 1664.00258 1664.00079 1.08 0.00045 0/0 0 0 44611060 HCD 30 MS2 18.67386 395 21.713 63.7367 18716 18716 18712 QEplus033719.raw F4 442.8 345.8 479.5 307 331.9 463.2 369 4.54 1 FALSE 1.14E-05 7.85E-09 1.637 -250 87896 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ACYGVLR [R].acYGVLR.[F] N-Term(TMT6plex); C2(Carbamidomethyl) 7 Q5YLW3 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1 Q9D0A2; D3YV43; Q9CZP6; Q3UCL7; O89068; Q5YLW3; Q3UK56 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; Ribosomal protein S3 (Fragment) OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1 0 2 2 0.3971 0 1 1 1 534.29712 1067.58696 1067.58692 0.04 0.00002 0/0 0 0 34066252 HCD 30 MS2 58.32808 1155.7 18.799 63.7389 18717 18717 18712 QEplus033719.raw F4 1105.8 910.1 1205.6 1238.8 1194.8 1278.8 133 2.04 1 FALSE 0.0023 0.04535 0.156 -250 87905 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYELQESNVR [R].sYELQESNVR.[L] N-Term(TMT6plex) 7 Q8C1B7 Septin-11 OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=4 A0A0J9YUV6; Q8C1B7; Q8C1B7-3; A0A0J9YVA6; A0A0J9YUL3; A0A0J9YTY0; Q8C1B7-2 Septin-11 (Fragment) OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=1; Septin-11 OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=4; Isoform 3 of Septin-11 OS=Mus musculus OX=10090 GN=Septin11; Septin-11 (Fragment) OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin11 PE=1 SV=1; Isoform 2 of Septin-11 OS=Mus musculus OX=10090 GN=Septin11 0 2 2 0.3175 0 1 1 1 727.37878 1453.75029 1453.74844 1.28 0.00093 0/0 0 0 32822116 HCD 30 MS2 36.95489 528.4 52.446 63.7412 18718 18718 18712 QEplus033719.raw F4 517 511.9 613.7 420.6 639.2 468.1 218 3.59 1 FALSE 1.14E-05 3.78E-07 1.318 -250 87914 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IRIEDPPR [K].iRIEDPPR.[R] N-Term(TMT6plex) 1 Q5SW83 Uncharacterized protein OS=Mus musculus OX=10090 GN=Actr2 PE=1 SV=1 Q5SW83 Uncharacterized protein OS=Mus musculus OX=10090 GN=Actr2 PE=1 SV=1 1 3 3 0.6265 0 1 1 1 408.91385 1224.72699 1224.72619 0.66 0.00027 0/0 0 0 30437890 HCD 30 MS2 14.5602 495.3 41.05 63.7435 18719 18719 18712 QEplus033719.raw F4 486.4 478.3 527.6 371 590.8 517.9 218 3.4 1 FALSE 0.001335 0.01829 0.297 -250 87941 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HFLAPGVR [R].hFLAPGVR.[R] N-Term(TMT6plex) 4 Q6P2K2 Acyl-CoA thioesterase 2 OS=Mus musculus OX=10090 GN=Acot2 PE=2 SV=1 Q99L15; O55137; Q6P2K2; Q9QYR9 "Acot1 protein (Fragment) OS=Mus musculus OX=10090 GN=Acot1 PE=2 SV=1; Acyl-coenzyme A thioesterase 1 OS=Mus musculus OX=10090 GN=Acot1 PE=1 SV=1; Acyl-CoA thioesterase 2 OS=Mus musculus OX=10090 GN=Acot2 PE=2 SV=1; Acyl-coenzyme A thioesterase 2, mitochondrial OS=Mus musculus OX=10090 GN=Acot2 PE=1 SV=2" 0 3 3 0.5872 0 1 1 1 375.89594 1125.67325 1125.67303 0.2 0.00007 0/0 0 0 10680603 HCD 30 MS2 37.19386 618.7 85.827 63.7578 18724 18724 18723 QEplus033719.raw F4 695.2 441.6 651.6 565.5 657.8 700.5 129 2.35 1 FALSE 0.0002218 0.004506 0.514 -250 87945 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDMAALEK [R].eDmAALEk.[D] N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex) 7 P68369; Q52L87; A0A0A0MQA5 Tubulin alpha-1A chain OS=Mus musculus OX=10090 GN=Tuba1a PE=1 SV=1;Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=1 SV=1;Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1 Q3TIZ0; Q99KA2; P68369; P05213; Q52L87; A0A0A0MQA5; P68368 Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=2 SV=1; Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba1b PE=2 SV=1; Tubulin alpha-1A chain OS=Mus musculus OX=10090 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Mus musculus OX=10090 GN=Tuba1b PE=1 SV=2; Tubulin alpha chain OS=Mus musculus OX=10090 GN=Tuba1c PE=1 SV=1; Tubulin alpha chain (Fragment) OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1; Tubulin alpha-4A chain OS=Mus musculus OX=10090 GN=Tuba4a PE=1 SV=1 0 2 2 0.2984 0 1 1 1 690.87555 1380.74382 1380.74449 -0.48 -0.00033 0/0 0 0 15364834 HCD 30 MS2 5.638563 809.9 110 63.7603 18725 18725 18723 QEplus033719.raw F4 820.8 592.2 922.4 767.2 799 957.5 363 2.48 3 FALSE 0.002636 0.05253 0.135 -250 87952 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SKFEEVER [R].skFEEVER.[S] N-Term(TMT6plex); K2(TMT6plex) 3 Q3U518 Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=2 SV=1 Q3U518; Q3TWG2; O08795-2 Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=2 SV=1; Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=2 SV=1; Isoform 2 of Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh 1 3 3 0.3578 0 1 1 1 494.61755 1481.83811 1481.83641 1.14 0.00056 0/0 0 0 92697784 HCD 30 MS2 57.06097 1164 14.599 63.7625 18726 18726 18723 QEplus033719.raw F4 1117.1 802.4 1298.9 1333.3 951.6 1480.8 412 2.18 1 FALSE 0.005733 0.09604 0.017 -250 87969 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESEFEK [R].eSEFEk.[L] N-Term(TMT6plex); K6(TMT6plex) 4 Q08943 FACT complex subunit SSRP1 OS=Mus musculus OX=10090 GN=Ssrp1 PE=1 SV=2 Q08943-2; Q08943; Q05DR5; A2AW05 Isoform 2 of FACT complex subunit SSRP1 OS=Mus musculus OX=10090 GN=Ssrp1; FACT complex subunit SSRP1 OS=Mus musculus OX=10090 GN=Ssrp1 PE=1 SV=2; FACT complex subunit SSRP1 (Fragment) OS=Mus musculus OX=10090 GN=Ssrp1 PE=2 SV=1; FACT complex subunit SSRP1 (Fragment) OS=Mus musculus OX=10090 GN=Ssrp1 PE=1 SV=1 0 2 2 0.242 0 1 1 1 613.83807 1226.66887 1226.66689 1.62 0.00099 0/0 0 0 15046178 HCD 30 MS2 31.21886 1356.9 110 63.7696 18729 18729 18723 QEplus033719.raw F4 1356.1 1321.6 1309.3 1049.7 1818.5 1286.3 229 2.19 1 FALSE 0.005374 0.09159 0.03 -250 87983 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QCCDCCGLGLR [K].qccDccGLGLR.[V] N-Term(TMT6plex); C2(Carbamidomethyl); C3(Carbamidomethyl); C5(Carbamidomethyl); C6(Carbamidomethyl) 3 P37889 Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 P37889-2; Q99K58; P37889 Isoform 2 of Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2; Fibulin 2 OS=Mus musculus OX=10090 GN=Fbln2 PE=2 SV=1; Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 0 2 2 0.7854 0 1 1 1 814.35443 1627.70159 1627.70105 0.33 0.00027 0/0 0 0 10749632 HCD 30 MS2 11.77504 694 110 63.7747 18731 18731 18723 QEplus033719.raw F4 714.3 577.6 771.4 811.8 529.8 759 17 3.96 1 FALSE 1.14E-05 2.64E-07 1.347 -250 87993 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTSSANNPNLMYQDECDRR [R].tTSSANNPNLMYQDEcDRR.[L] N-Term(TMT6plex); C16(Carbamidomethyl) 5 Q501J6 Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1 Q501J6; Q3U741; Q78W10; Q3U6Y5; Q8K392 Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ddx17 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ddx17 PE=2 SV=1; DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 OS=Mus musculus OX=10090 GN=Ddx17 PE=2 SV=2 1 3 3 0.7951 0 1 1 1 834.38403 2501.13755 2501.13465 1.16 0.00097 0/0 0 0 5571663.5 HCD 30 MS2 0 210.4 110 63.7794 18733 18733 18723 QEplus033719.raw F4 213.8 186.3 249 177.1 232 204.4 45 6.49 1 FALSE 1.14E-05 6.31E-16 4.3 -250 87997 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNDEITEDDNIR [K].dNDEITEDDNIR.[M] N-Term(TMT6plex) 5 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.8081 0 1 1 1 839.39301 1677.77873 1677.7765 1.33 0.00112 0/0 0 0 8502069 HCD 30 MS2 24.71194 377 110 63.7868 18735 18735 18734 QEplus033719.raw F4 404.1 145.2 336.6 586.3 147.2 642.6 62 5.21 2 FALSE 1.14E-05 1.08E-10 1.991 -250 88017 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAVLSQNR [K].vAVLSQNR.[A] N-Term(TMT6plex) 4 Q8CAY6 "Acetyl-CoA acetyltransferase, cytosolic OS=Mus musculus OX=10090 GN=Acat2 PE=1 SV=2" G3XA25; Q80X81; Q8R4V3; Q8CAY6 "Acetyl-CoA acetyltransferase, cytosolic OS=Mus musculus OX=10090 GN=Acat2 PE=1 SV=1; Acetyl-Coenzyme A acetyltransferase 3 OS=Mus musculus OX=10090 GN=Acat3 PE=1 SV=1; Acetyl CoA transferase-like protein OS=Mus musculus OX=10090 GN=Acat3 PE=2 SV=1; Acetyl-CoA acetyltransferase, cytosolic OS=Mus musculus OX=10090 GN=Acat2 PE=1 SV=2" 0 2 2 0.6578 0 1 1 1 558.34106 1115.67485 1115.67342 1.28 0.00071 0/0 0 0 57182416 HCD 30 MS2 22.92489 588.6 22.931 63.7935 18738 18738 18734 QEplus033719.raw F4 508.4 530.4 687.1 458.3 673.5 673.9 228 2.63 1 FALSE 1.14E-05 0.0007285 0.69 -250 88027 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTLVQTK [K].gTLVQTk.[G] N-Term(TMT6plex); K7(TMT6plex) 5 P43274; Q1WWK3; P43275 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2;Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1;Histone H1.1 OS=Mus musculus OX=10090 GN=H1-1 PE=1 SV=2 P43274; Q1WWK3; P43275; P43276; P43277 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2; Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1; Histone H1.1 OS=Mus musculus OX=10090 GN=H1-1 PE=1 SV=2; Histone H1.5 OS=Mus musculus OX=10090 GN=H1-5 PE=1 SV=2; Histone H1.3 OS=Mus musculus OX=10090 GN=H1-3 PE=1 SV=2 0 2 2 0.3711 0 1 1 1 602.88849 1204.7697 1204.76654 2.62 0.00158 0/0 0 0 53006860 HCD 30 MS2 19.89783 1353 26.493 63.7958 18739 18739 18734 QEplus033719.raw F4 1325.7 1552.7 1431.7 779.6 2023.7 1004.4 198 2.91 3 FALSE 0.001169 0.01565 0.325 -250 88044 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGSVAIASKPR [K].dGSVAIASkPR.[E] N-Term(TMT6plex); K9(TMT6plex) 6 Q9D0K2 "Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Mus musculus OX=10090 GN=Oxct1 PE=1 SV=1" Q9CRF4; Q3U9P7; Q3UK61; A1E285; Q9D0K2; Q3UJQ9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Oxct1 PE=2 SV=3; Succinyl-CoA:3-ketoacid-coenzyme A transferase OS=Mus musculus OX=10090 GN=Oxct1 PE=2 SV=1; Succinyl-CoA:3-ketoacid-coenzyme A transferase OS=Mus musculus OX=10090 GN=Oxct1 PE=2 SV=1; Succinyl-CoA:3-ketoacid CoA transferase (Fragment) OS=Mus musculus OX=10090 GN=Oxct1 PE=2 SV=1; Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Mus musculus OX=10090 GN=Oxct1 PE=1 SV=1; Succinyl-CoA:3-ketoacid-coenzyme A transferase OS=Mus musculus OX=10090 GN=Oxct1 PE=1 SV=1" 0 3 3 0.6895 0 1 1 1 520.31628 1558.9343 1558.93171 1.66 0.00086 0/0 0 0 35624376 HCD 30 MS2 33.22653 1403.3 42.664 63.8003 18741 18741 18734 QEplus033719.raw F4 1407.2 1420.6 1528.4 1083.6 1685.8 1294.5 432 3.8 1 FALSE 1.14E-05 1.08E-10 1.99 -250 88050 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRVTDALNATR [K].dRVTDALNATR.[A] N-Term(TMT6plex) 2 P63038 "60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" P63038-2; P63038 "Isoform 2 of 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1; 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" 1 3 3 0.6605 0 1 1 1 487.60651 1460.80497 1460.80187 2.12 0.00103 0/0 0 0 34537200 HCD 30 MS2 38.80908 1031.5 41.809 63.8026 18742 18742 18734 QEplus033719.raw F4 1196.8 832.4 1073.3 864.5 1204.6 1017.2 359 4.86 1 FALSE 1.14E-05 3.36E-07 1.327 -250 88056 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEVISTSSK [K].qEVISTSSk.[A] N-Term(TMT6plex); K9(TMT6plex) 1 P68040 Receptor of activated protein C kinase 1 OS=Mus musculus OX=10090 GN=Rack1 PE=1 SV=3 P68040 Receptor of activated protein C kinase 1 OS=Mus musculus OX=10090 GN=Rack1 PE=1 SV=3 0 2 2 0.5219 0 1 1 1 718.92291 1436.83855 1436.83608 1.72 0.00123 0/0 0 0 32627022 HCD 30 MS2 0 1450.7 110 63.8074 18744 18744 18734 QEplus033719.raw F4 1758.4 1026 1548.9 1125.2 1623.4 1622.3 421 3.2 1 FALSE 1.14E-05 1.94E-05 0.993 -250 88064 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANPFGGASHAK [K].aNPFGGASHAk.[G] N-Term(TMT6plex); K11(TMT6plex) 5 Q9CWI9 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1 Q497E1; Q9CSN9; Q9CWI9; Q9CZI5; P62267 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 (Fragment) OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=1 SV=3 0 3 3 0.7071 0 1 1 1 505.62143 1514.84974 1514.84798 1.16 0.00058 0/0 0 0 55385308 HCD 30 MS2 11.6259 635.3 20.035 63.8147 18746 18746 18745 QEplus033719.raw F4 874.5 447.3 628.5 521.2 742.8 597.4 428 6.35 1 FALSE 1.14E-05 1.00E-14 2.756 -250 88081 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LYEEGSNK [K].lYEEGSNk.[R] N-Term(TMT6plex); K8(TMT6plex) 2 Q9DCD8 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1 Q9DCD8; O70435 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1; Proteasome subunit alpha type-3 OS=Mus musculus OX=10090 GN=Psma3 PE=1 SV=3 0 2 2 0.6657 0 1 1 1 699.38867 1397.77007 1397.76767 1.72 0.0012 0/0 0 0 40182548 HCD 30 MS2 25.74924 986.4 42.533 63.8215 18749 18749 18745 QEplus033719.raw F4 1033.9 868.4 980.8 818.7 1187.4 1029.1 308 3.29 1 FALSE 1.14E-05 0.0002604 0.777 -250 88089 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QMSGAQIK [R].qMSGAQIk.[I] N-Term(TMT6plex); K8(TMT6plex) 15 A0A2R8W6U6; Q61990; P60335; P57722 Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1;Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1;Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1;Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3 A0A2R8W6U6; Q61990; G3UYM5; Q61990-3; A0A2R8VI25; Q3V486; B2M1R7; Q61990-2; P60335; Q3TT81; P57722; A0A2R8VI92; A0A2R8VHP9; P57722-2; A0A2R8W6H3 Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=1; Isoform 3 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; KH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=2 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1 0 2 2 0.5199 0 1 1 1 660.88947 1320.77165 1320.77098 0.51 0.00034 0/0 0 0 39465984 HCD 30 MS2 19.69259 1219.4 51.624 63.8237 18750 18750 18745 QEplus033719.raw F4 1303.5 1088.9 1266 913.4 1488.4 1256.2 456 3.02 4 FALSE 1.14E-05 0.0002856 0.77 -250 88097 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAMMAK [R].dAMMAk.[A] N-Term(TMT6plex); K6(TMT6plex) 3 Q99JI4 26S proteasome non-ATPase regulatory subunit 6 OS=Mus musculus OX=10090 GN=Psmd6 PE=1 SV=1 A0A286YDW8; Q8C1T2; Q99JI4 26S proteasome non-ATPase regulatory subunit 6 (Fragment) OS=Mus musculus OX=10090 GN=Psmd6 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psmd6 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 6 OS=Mus musculus OX=10090 GN=Psmd6 PE=1 SV=1 0 2 2 0.507 0 1 1 1 562.81451 1124.62175 1124.62081 0.84 0.00047 0/0 0 0 32510278 HCD 30 MS2 40.49514 1268 29.177 63.826 18751 18751 18745 QEplus033719.raw F4 1385.5 952.7 1265.4 1177.9 1444.8 1381.8 157 2.13 1 FALSE 0.004122 0.07557 0.073 -250 88105 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VADAMK [K].vADAMk.[Q] N-Term(TMT6plex); K6(TMT6plex) 4 Q5RKP0 Vat1 protein (Fragment) OS=Mus musculus OX=10090 GN=Vat1 PE=2 SV=1 Q5RKP0; Q3U331; Q62465; Q3TXD3 Vat1 protein (Fragment) OS=Mus musculus OX=10090 GN=Vat1 PE=2 SV=1; PKS_ER domain-containing protein OS=Mus musculus OX=10090 GN=Vat1 PE=2 SV=1; Synaptic vesicle membrane protein VAT-1 homolog OS=Mus musculus OX=10090 GN=Vat1 PE=1 SV=3; PKS_ER domain-containing protein OS=Mus musculus OX=10090 GN=Vat1 PE=2 SV=1 0 2 2 0.3156 0 1 1 1 546.82745 1092.64763 1092.64874 -1.01 -0.00055 0/0 0 0 28704746 HCD 30 MS2 43.32181 1159.7 27.132 63.8282 18752 18752 18745 QEplus033719.raw F4 1299.7 956.5 1443.6 1041.4 1133.8 1083.4 118 2.25 1 FALSE 0.004228 0.07753 0.068 -250 88123 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TCDALQAK [K].tcDALQAk.[V] N-Term(TMT6plex); C2(Carbamidomethyl); K8(TMT6plex) 7 Q61941 "NAD(P) transhydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Nnt PE=1 SV=2" Q8BGK0; Q61941; Q8C9V5; Q922E1; Q8C1W8; Q3TWH2; Q8C3H2 "Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=1 SV=1; NAD(P) transhydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Nnt PE=1 SV=2; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=1 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=2 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=2 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=2 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=2 SV=1" 0 2 2 0.3901 0 1 1 1 682.88483 1364.76238 1364.76081 1.15 0.00078 0/0 0 0 19249564 HCD 30 MS2 29.54181 936.7 110 63.8353 18755 18755 18745 QEplus033719.raw F4 882.4 759.5 1086.3 869.9 933.1 1088.7 435 2.82 1 FALSE 1.14E-05 0.0002088 0.796 -250 88141 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRDSFLK [K].sRDSFLk.[R] N-Term(TMT6plex); K7(TMT6plex) 3 Q9CQM8 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=1 Q4VA28; Q9CQM8; O09167 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=2 SV=1; 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=1; 60S ribosomal protein L21 OS=Mus musculus OX=10090 GN=Rpl21 PE=1 SV=3 1 3 3 0.407 0 1 1 1 437.59979 1310.78482 1310.78326 1.2 0.00052 0/0 0 0 216136416 HCD 30 MS2 14.61471 734.1 5.928 63.8471 18759 18759 18756 QEplus033719.raw F4 728.4 622 854.4 570.3 849.2 780.3 293 2.58 1 FALSE 0.001429 0.02062 0.276 -250 88155 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RETGVDLTK [K].rETGVDLTk.[D] N-Term(TMT6plex); K9(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 1 3 3 0.5385 0 1 1 1 492.96497 1476.88034 1476.87861 1.17 0.00058 0/0 0 0 44365472 HCD 30 MS2 12.64036 913 50.86 63.8538 18762 18762 18756 QEplus033719.raw F4 1116.7 604.9 985.9 811.4 852.4 1106.8 420 4.16 1 FALSE 1.14E-05 9.74E-08 1.429 -250 88164 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAIAER [K].lAIAER.[IY] N-Term(TMT6plex) 3 Q8CGK3 "Lon protease homolog, mitochondrial OS=Mus musculus OX=10090 GN=Lonp1 PE=1 SV=2" Q8CGK3; Q56A16; Q3V2D0 "Lon protease homolog, mitochondrial OS=Mus musculus OX=10090 GN=Lonp1 PE=1 SV=2; Lonp1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lonp1 PE=2 SV=1; Lon protease homolog, mitochondrial OS=Mus musculus OX=10090 GN=Lonp1 PE=2 SV=1" 0 2 2 0.0721 0 1 1 3 451.28741 901.56755 901.56683 0.8 0.00036 0/0 0 0 39334396 HCD 30 MS2 33.29908 744.8 34.588 63.8561 18763 18763 18756 QEplus033719.raw F4 761 638.1 899.9 634.2 585 950.3 152 2.22 1 FALSE 0.002293 0.04496 0.158 -250 88165 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LALAER [K].lALAER.[IY] N-Term(TMT6plex) 9 Q3U4T5 PUM-HD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Pum1 PE=2 SV=1 Q3U4T5; Q3UHW0; Q3TTW5; E9Q6M7; Q80U78-2; Q80U78; Q3TRI4; Q80U78-3; Q3UR00 PUM-HD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Pum1 PE=2 SV=1; PUM-HD domain-containing protein OS=Mus musculus OX=10090 GN=Pum1 PE=2 SV=1; Pumilio homolog 1 OS=Mus musculus OX=10090 GN=Pum1 PE=1 SV=1; Pumilio homolog 1 OS=Mus musculus OX=10090 GN=Pum1 PE=1 SV=1; Isoform 2 of Pumilio homolog 1 OS=Mus musculus OX=10090 GN=Pum1; Pumilio homolog 1 OS=Mus musculus OX=10090 GN=Pum1 PE=1 SV=2; PUM-HD domain-containing protein OS=Mus musculus OX=10090 GN=Pum1 PE=2 SV=1; Isoform 3 of Pumilio homolog 1 OS=Mus musculus OX=10090 GN=Pum1; PUM-HD domain-containing protein OS=Mus musculus OX=10090 GN=Pum1 PE=2 SV=1 0 2 2 0.0721 0 1 2 2 451.28741 901.56755 901.56683 0.8 0.00036 0/0 0 0 39334396 HCD 30 MS2 33.29908 744.8 34.588 63.8561 18763 18763 18756 QEplus033719.raw F4 761 638.1 899.9 634.2 585 950.3 152 2.22 1 FALSE 0.002293 0.04496 0.158 -250 88174 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLDDGIDDER [K].nLDDGIDDER.[L] N-Term(TMT6plex) 7 P29341 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2 P29341; Q3U8U8; Q9D4E6; Q62029; Q792Y0; Q8BN32; Q99KL3 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc6 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc2 PE=1 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 PE=3 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1 0 2 2 0.7186 0 1 1 1 695.83685 1390.66643 1390.66477 1.19 0.00083 0/0 0 0 33297588 HCD 30 MS2 16.38956 747.7 65.418 63.8584 18764 18764 18756 QEplus033719.raw F4 749.7 655.1 864 590.4 825.7 801.2 69 3.66 1 FALSE 1.14E-05 2.45E-07 1.353 -250 88198 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLCGGGAAADR [K].lLcGGGAAADR.[G] N-Term(TMT6plex); C3(Carbamidomethyl) 7 P47738 "Aldehyde dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1" P47738; Q3TVM2; A0A0G2JF60; A0A0G2JEU1; Q3UJW1; Q3U9J7; Q3U6I3 "Aldehyde dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1; Aldehyde dehydrogenase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1; Aldehyde dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1" 0 2 2 0.4953 0 1 1 1 645.34509 1289.68291 1289.68334 -0.33 -0.00021 0/0 0 0 76634568 HCD 30 MS2 7.782639 689.9 26.247 63.8725 18769 18769 18767 QEplus033719.raw F4 640.6 511.4 761.6 811.7 570.8 843.5 278 3.19 1 FALSE 1.14E-05 2.68E-08 1.536 -250 88206 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLGATIK [K].hLGATIk.[C] N-Term(TMT6plex); K7(TMT6plex) 5 G3UWI5 Histone-lysine N-methyltransferase 2C (Fragment) OS=Mus musculus OX=10090 GN=Kmt2c PE=1 SV=8 G3UWI5; Q8BRH4-2; F8WI37; Q8BRH4; G3UZC8 Histone-lysine N-methyltransferase 2C (Fragment) OS=Mus musculus OX=10090 GN=Kmt2c PE=1 SV=8; Isoform 2 of Histone-lysine N-methyltransferase 2C OS=Mus musculus OX=10090 GN=Kmt2c; [Histone H3]-lysine(4) N-trimethyltransferase OS=Mus musculus OX=10090 GN=Kmt2c PE=1 SV=1; Histone-lysine N-methyltransferase 2C OS=Mus musculus OX=10090 GN=Kmt2c PE=1 SV=2; Histone-lysine N-methyltransferase 2C (Fragment) OS=Mus musculus OX=10090 GN=Kmt2c PE=1 SV=1 0 3 3 0.2415 0 1 1 1 399.92926 1197.77323 1197.77196 1.06 0.00042 0/0 0 0 34813432 HCD 30 MS2 37.83435 429.7 28.224 63.8747 18770 18770 18767 QEplus033719.raw F4 1015.7 124 159.7 402.3 709 167.4 108 2.36 1 FALSE 0.001988 0.03506 0.193 -250 88214 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTLVQTK [K].gTLVQTk.[G] N-Term(TMT6plex); K7(TMT6plex) 5 P43274; Q1WWK3; P43275 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2;Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1;Histone H1.1 OS=Mus musculus OX=10090 GN=H1-1 PE=1 SV=2 P43274; Q1WWK3; P43275; P43276; P43277 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2; Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1; Histone H1.1 OS=Mus musculus OX=10090 GN=H1-1 PE=1 SV=2; Histone H1.5 OS=Mus musculus OX=10090 GN=H1-5 PE=1 SV=2; Histone H1.3 OS=Mus musculus OX=10090 GN=H1-3 PE=1 SV=2 0 3 3 0.4714 0 1 1 1 402.26065 1204.7674 1204.76654 0.71 0.00028 0/0 0 0 33944152 HCD 30 MS2 31.83606 706 35.802 63.877 18771 18771 18767 QEplus033719.raw F4 647.7 802.4 801 443 993.7 548 223 2.8 3 FALSE 0.001946 0.03348 0.2 -250 88224 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGGDFKPQGK [R].gGGGDFkPQGk.[K] N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex) 6 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 3 3 0.5401 0 1 1 1 579.00897 1735.01236 1735.01058 1.03 0.00059 0/0 0 0 31107380 HCD 30 MS2 25.97852 1322 54.787 63.8792 18772 18772 18767 QEplus033719.raw F4 1448.2 917.6 1379.5 941.7 1814.6 1430.4 407 1.87 1 FALSE 1.14E-05 0.0005721 0.711 -250 88230 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVTEETVK [K].aVTEETVk.[E] N-Term(TMT6plex); K8(TMT6plex) 4 Q4FJZ4 T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1 Q4FJZ4; Q3UDG2; Q3U6U7; P32921 "T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; Tryptophan--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Wars1 PE=1 SV=2" 0 2 2 0.5308 0 1 1 1 667.90375 1334.80022 1334.79315 5.29 0.00353 0/0 0 0 30974570 HCD 30 MS2 60.35366 1121.2 57.288 63.8815 18773 18773 18767 QEplus033719.raw F4 1084.6 1037.8 1363.2 975.4 1047.9 1218.1 347 2.92 1 FALSE 1.14E-05 7.44E-05 0.882 -250 88247 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRTELADK [R].vRTELADk.[V] N-Term(TMT6plex); K8(TMT6plex) 3 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; O89055; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Nonmuscle myosin heavy chain-A (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 1 3 3 0.36 0 1 1 1 463.95432 1389.84839 1389.84659 1.3 0.0006 0/0 0 0 27211280 HCD 30 MS2 14.81582 768.2 41.256 63.886 18775 18775 18767 QEplus033719.raw F4 810.5 693.6 867.3 563.7 858.4 815.9 439 3 1 FALSE 0.0006294 0.009701 0.409 -250 88273 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGQIIPTAR [R].gGGQIIPTAR.[R] N-Term(TMT6plex) 26 Q3UMI7; Q3U5Q3 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1;116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=2 SV=1 Q3UMI7; Q3TSK4; Q8C153; P58252; Q61509; Q3TW58; G3UZ34; Q3UDC8; Q3TJZ1; Q3UBL9; Q3U5Q3; Q3TMY8; Q8BMA8; Q6P9L9; Q3TPG2; Q543F1; Q3UZ14; Q3TK17; Q99LT6; Q3TLB1; Q6A0E3; Q7TMX4; G3UXK8; Q3TWX1; Q3TX47; A2AH85 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Elongation factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=1 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=1 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component (Fragment) OS=Mus musculus OX=10090 GN=Eftud2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component (Fragment) OS=Mus musculus OX=10090 GN=Eftud2 PE=1 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; 116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus OX=10090 GN=Eftud2 PE=1 SV=1 0 2 2 0.6203 0 1 1 1 599.85956 1198.71184 1198.71054 1.09 0.00065 0/0 0 0 118688032 HCD 30 MS2 21.46063 928 13.776 63.8978 18779 18779 18778 QEplus033719.raw F4 996.8 671.4 989.7 846.1 992.2 1072 230 2.66 2 FALSE 1.14E-05 2.06E-05 0.988 -250 88302 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEVISTSSK [K].qEVISTSSk.[A] N-Term(TMT6plex); K9(TMT6plex) 1 P68040 Receptor of activated protein C kinase 1 OS=Mus musculus OX=10090 GN=Rack1 PE=1 SV=3 P68040 Receptor of activated protein C kinase 1 OS=Mus musculus OX=10090 GN=Rack1 PE=1 SV=3 0 3 3 0.571 0 1 1 1 479.61743 1436.83774 1436.83608 1.16 0.00055 0/0 0 0 73383320 HCD 30 MS2 54.67032 889.9 20.655 63.9069 18783 18783 18778 QEplus033719.raw F4 889.2 732.9 1096 763.1 886.5 971.9 429 3.66 1 FALSE 0.0002119 0.004456 0.515 -250 88307 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRVTDALNATR [K].dRVTDALNATR.[A] N-Term(TMT6plex) 2 P63038 "60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" P63038-2; P63038 "Isoform 2 of 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1; 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" 1 2 2 0.5592 0 1 1 1 730.90607 1460.80486 1460.80187 2.04 0.00149 0/0 0 0 28064306 HCD 30 MS2 18.01095 315.8 63.268 63.9091 18784 18784 18778 QEplus033719.raw F4 310 268.8 367 260.4 345.3 343.2 359 3.63 1 FALSE 1.14E-05 3.40E-06 1.136 -250 88314 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSTGRPIAFVR [R].sSTGRPIAFVR.[K] N-Term(TMT6plex) 4 Q9D8T7 "SRA stem-loop-interacting RNA-binding protein, mitochondrial OS=Mus musculus OX=10090 GN=Slirp PE=1 SV=2" Q9D8T7-2; Q9D8T7; F8WHU8; F7DE82 "Isoform 2 of SRA stem-loop-interacting RNA-binding protein, mitochondrial OS=Mus musculus OX=10090 GN=Slirp; SRA stem-loop-interacting RNA-binding protein, mitochondrial OS=Mus musculus OX=10090 GN=Slirp PE=1 SV=2; SRA stem-loop-interacting RNA-binding protein, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Slirp PE=1 SV=1; SRA stem-loop-interacting RNA-binding protein, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Slirp PE=1 SV=1" 0 3 3 0.5158 0 1 1 1 473.94751 1419.82798 1419.82696 0.71 0.00034 0/0 0 0 27350284 HCD 30 MS2 44.43565 958.3 37.978 63.9114 18785 18785 18778 QEplus033719.raw F4 1531.2 570.9 976.1 818.9 662.6 1190.1 488 3.49 1 FALSE 1.14E-05 0.0001095 0.85 -250 88322 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQNFQETLR [R].nQNFQETLR.[R] N-Term(TMT6plex) 2 Q8CGY6 Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b PE=1 SV=1 Q8CGY6; Q8CGY6-2 Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b PE=1 SV=1; Isoform 2 of Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b 0 2 2 0.7005 0 1 1 1 689.86792 1378.72856 1378.72764 0.67 0.00046 0/0 0 0 22288812 HCD 30 MS2 0 777.3 110 63.9139 18786 18786 18778 QEplus033719.raw F4 835.3 293.5 897 1022.6 312.4 1303.2 294 3.74 1 FALSE 1.14E-05 2.64E-05 0.967 -250 88337 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFASPGQQK [R].eFASPGQQk.[K] N-Term(TMT6plex); K9(TMT6plex) 5 D3Z0I8 Transmembrane protein 109 (Fragment) OS=Mus musculus OX=10090 GN=Tmem109 PE=1 SV=1 D3Z0I8; D3YX08; D3Z3Z2; D3Z7P2; Q3UBX0 Transmembrane protein 109 (Fragment) OS=Mus musculus OX=10090 GN=Tmem109 PE=1 SV=1; Transmembrane protein 109 OS=Mus musculus OX=10090 GN=Tmem109 PE=1 SV=1; Transmembrane protein 109 (Fragment) OS=Mus musculus OX=10090 GN=Tmem109 PE=1 SV=1; Transmembrane protein 109 (Fragment) OS=Mus musculus OX=10090 GN=Tmem109 PE=1 SV=1; Transmembrane protein 109 OS=Mus musculus OX=10090 GN=Tmem109 PE=1 SV=2 0 2 2 0.5689 0 1 1 1 725.40985 1449.81243 1449.8102 1.54 0.00111 0/0 0 0 20105660 HCD 30 MS2 10.03187 818.6 110 63.919 18788 18788 18778 QEplus033719.raw F4 846.2 592.4 897.1 804 769.7 1002.4 487 3.41 1 FALSE 1.14E-05 0.000168 0.814 -250 88343 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQLPADECNK [K].dQLPADEcNk.[L] N-Term(TMT6plex); C8(Carbamidomethyl); K10(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 0 3 3 0.6782 0 1 1 1 549.95239 1647.84262 1647.84124 0.84 0.00046 0/0 0 0 33448636 HCD 30 MS2 28.56968 874.4 49.195 63.9263 18790 18790 18789 QEplus033719.raw F4 892.8 652.8 948 849.9 905.4 997.2 229 4.04 1 FALSE 1.14E-05 2.80E-06 1.152 -250 88350 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LYEEGSNK [K].lYEEGSNk.[R] N-Term(TMT6plex); K8(TMT6plex) 2 Q9DCD8 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1 Q9DCD8; O70435 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1; Proteasome subunit alpha type-3 OS=Mus musculus OX=10090 GN=Psma3 PE=1 SV=3 0 3 3 0.526 0 1 1 1 466.59488 1397.77008 1397.76767 1.73 0.00081 0/0 0 0 18851470 HCD 30 MS2 36.88186 940.7 97.181 63.9285 18791 18791 18789 QEplus033719.raw F4 1057.1 806.1 963.5 745.9 984.1 1087.4 308 3.08 1 FALSE 0.001248 0.01687 0.311 -250 88365 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTYMEEER [K].vTYMEEER.[N] N-Term(TMT6plex) 5 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q8C6R3; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 0 2 2 0.6376 0 1 1 1 643.31885 1285.63042 1285.62957 0.66 0.00043 0/0 0 0 34979308 HCD 30 MS2 6.2542 632.6 66.259 63.9376 18795 18795 18789 QEplus033719.raw F4 599.7 511.1 667.1 631.1 641.6 745.3 83 3.56 1 FALSE 1.14E-05 0.0002311 0.787 -250 88372 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QMSGAQIK [R].qMSGAQIk.[I] N-Term(TMT6plex); K8(TMT6plex) 15 A0A2R8W6U6; Q61990; P60335; P57722 Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1;Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1;Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1;Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3 A0A2R8W6U6; Q61990; G3UYM5; Q61990-3; A0A2R8VI25; Q3V486; B2M1R7; Q61990-2; P60335; Q3TT81; P57722; A0A2R8VI92; A0A2R8VHP9; P57722-2; A0A2R8W6H3 Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=1; Isoform 3 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; KH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=2 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1 0 3 3 0.5582 0 1 1 1 440.92896 1320.77231 1320.77098 1.01 0.00044 0/0 0 0 34887868 HCD 30 MS2 57.16121 658 29.547 63.9399 18796 18796 18789 QEplus033719.raw F4 876.3 540.5 678.8 529.8 649 673.7 441 2.92 4 FALSE 0.0001603 0.003587 0.539 -250 88379 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLGLGK [R].hLGLGk.[ET] N-Term(TMT6plex); K6(TMT6plex) 11 Q3THP1 Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1 Q8BYF3; Q99KK7; Q3THP1; Q6NXZ0; Q3UDD5; Q3UDF3; Q3UDY7; P97401; A0A494BBC1; Q8BU29; A0A494BBB3 Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=1 SV=2; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Secreted frizzled-related protein 3 OS=Mus musculus OX=10090 GN=Frzb PE=1 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=1 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 (Fragment) OS=Mus musculus OX=10090 GN=Dpp3 PE=1 SV=1 0 3 3 0.446 0 1 1 1 361.57468 1082.70948 1082.70864 0.78 0.00028 0/0 0 0 22223486 HCD 30 MS2 15.37109 730.1 51.879 63.9421 18797 18797 18789 QEplus033719.raw F4 754.3 560.2 774.1 670.4 764.8 856.8 35 2.87 1 FALSE 0.002049 0.03595 0.19 -250 88399 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGLSQPSEPK [K].dGLSQPSEPk.[S] N-Term(TMT6plex); K10(TMT6plex) 5 Q9JIK5 Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3 Q8K2L4; Q6PCP0; Q9JIK5; Q3ULC7; Q9CWZ5 RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=1; Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=2 0 2 2 0.6257 0 1 1 1 758.42639 1515.84551 1515.84189 2.38 0.00181 0/0 0 0 10615457 HCD 30 MS2 7.68577 469 110 63.9472 18799 18799 18789 QEplus033719.raw F4 450.3 405.4 535.5 358.2 553.9 510.8 372 3.34 1 FALSE 1.14E-05 1.13E-06 1.228 -250 88407 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSSETGGMGSS [R].lSSETGGMGSS.[-] N-Term(TMT6plex) 11 A0A2R8W6U6; Q61990 Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1;Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1 A0A2R8W6U6; Q61990; Q61990-3; A0A2R8VI25; Q3V486; B2M1R7; Q61990-2; Q3TT81; A0A2R8VI92; A0A2R8VHP9; A0A2R8W6H3 Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 3 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; KH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=2 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1 0 2 2 0.858 0 1 1 1 621.29816 1241.58904 1241.5881 0.76 0.00047 0/0 0 0 12936765 HCD 30 MS2 32.95916 763.4 110 63.957 18802 18802 18800 QEplus033719.raw F4 859 637.4 756.6 627.6 903.6 796.2 36 3.31 2 FALSE 1.14E-05 0.0005446 0.715 -250 88455 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGHAVGDIPGVR [R].kGHAVGDIPGVR.[F] N-Term(TMT6plex); K1(TMT6plex) 5 Q9CWI9 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1 Q497E1; Q9CSN9; Q9CWI9; Q9CZI5; P62267 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 (Fragment) OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=1 SV=3 1 3 3 0.6597 0 1 1 1 555.33704 1663.99656 1664.00079 -2.55 -0.00141 0/0 0 0 9817693 HCD 30 MS2 53.30739 901.6 110 63.9708 18808 18808 18800 QEplus033719.raw F4 926.4 829.5 1075.1 780.3 820 978.1 378 4.29 1 FALSE 1.14E-05 7.80E-08 1.448 -250 88463 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIESATQQTDK [K].tIESATQQTDk.[L] N-Term(TMT6plex); K11(TMT6plex) 6 F8VQC1 Signal recognition particle subunit SRP72 OS=Mus musculus OX=10090 GN=Srp72 PE=1 SV=1 A0JLN1; Q3UZL8; E9Q740; F8VQC1; Q3UU23; A0PJ97 Srp72 protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1; Signal recognition particle subunit SRP72 OS=Mus musculus OX=10090 GN=Srp72 PE=1 SV=1; Signal recognition particle subunit SRP72 OS=Mus musculus OX=10090 GN=Srp72 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1; Srp72 protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1 0 2 2 0.6446 0 1 1 1 840.46545 1679.92363 1679.9216 1.21 0.00102 0/0 0 0 7650109.5 HCD 30 MS2 0 381.2 110 63.9734 18809 18809 18800 QEplus033719.raw F4 375.4 328 422.6 334.4 376.2 450.6 420 4.98 1 FALSE 1.14E-05 8.70E-08 1.439 -250 88470 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQAILLHAK [R].rQAILLHAk.[L] N-Term(TMT6plex); K9(TMT6plex) 2 Q8BHC4 Dephospho-CoA kinase domain-containing protein OS=Mus musculus OX=10090 GN=Dcakd PE=1 SV=1 Q6PDP7; Q8BHC4 Dcakd protein (Fragment) OS=Mus musculus OX=10090 GN=Dcakd PE=2 SV=1; Dephospho-CoA kinase domain-containing protein OS=Mus musculus OX=10090 GN=Dcakd PE=1 SV=1 1 4 4 0.6939 0 1 1 1 377.75153 1507.98427 1507.98369 0.39 0.00015 0/0 0 0 6157782 HCD 30 MS2 6.716455 367.7 110 63.9758 18810 18810 18800 QEplus033719.raw F4 344.6 275.9 472.3 321.2 324.2 468.2 168 4.9 1 FALSE 1.14E-05 2.18E-07 1.363 -250 88478 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CGQYIQK [K].cGQYIQk.[G] N-Term(TMT6plex); C1(Carbamidomethyl); K7(TMT6plex) 4 B9EK95 Myof protein OS=Mus musculus OX=10090 GN=Myof PE=2 SV=1 A0A286YDF5; B9EK95; E9Q390; Q69ZN7 Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=1; Myof protein OS=Mus musculus OX=10090 GN=Myof PE=2 SV=1; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=2; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=2 0 2 2 0.3779 0 1 1 1 677.88135 1354.75542 1354.75533 0.07 0.00005 0/0 0 0 8985473 HCD 30 MS2 9.618789 708.8 110 63.9832 18812 18812 18811 QEplus033719.raw F4 657.3 654.5 823.7 622.7 766 728.7 337 2.99 1 FALSE 0.0002518 0.005244 0.495 -250 88517 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQNGDDPLMTYR [R].rQNGDDPLMTYR.[F] N-Term(TMT6plex) 4 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; Q9CTL2; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; LTD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Lmna PE=2 SV=1; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 1 3 3 0.7333 0 1 1 1 565.6203 1694.84635 1694.84817 -1.07 -0.00061 0/0 0 0 20440940 HCD 30 MS2 38.81693 1337.2 73.522 63.9945 18817 18817 18811 QEplus033719.raw F4 1468.1 930.4 1418.3 1363.3 1248.8 1594.2 179 3.9 1 FALSE 1.14E-05 4.20E-08 1.499 -250 88523 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADSGDYVCK [K].aDSGDYVck.[A] N-Term(TMT6plex); C8(Carbamidomethyl); K9(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A2AT70; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.5512 0 1 1 1 736.87787 1472.74846 1472.74555 1.98 0.00145 0/0 0 0 11093864 HCD 30 MS2 0 648.3 110 63.997 18818 18818 18811 QEplus033719.raw F4 768.9 163.5 573.5 1210.1 200 973.6 129 3.32 2 FALSE 1.14E-05 5.36E-06 1.099 -250 88529 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YNSMEDAK [K].yNSMEDAk.[V] N-Term(TMT6plex); K8(TMT6plex) 3 E9PXX7 Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=1 E9PXX7; Q3UBW8; Q91W90 Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Txndc5 PE=2 SV=1; Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=2 0 2 2 0.6306 0 1 1 1 708.36725 1415.72722 1415.72409 2.21 0.00157 0/0 0 0 7007269 HCD 30 MS2 0 758.6 110 63.9995 18819 18819 18811 QEplus033719.raw F4 784.7 716.4 831.4 600.1 864.6 754.5 167 3.14 1 FALSE 1.14E-05 0.0004882 0.724 -250 88557 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIESATQQTDK [K].tIESATQQTDk.[L] N-Term(TMT6plex); K11(TMT6plex) 6 F8VQC1 Signal recognition particle subunit SRP72 OS=Mus musculus OX=10090 GN=Srp72 PE=1 SV=1 A0JLN1; Q3UZL8; E9Q740; F8VQC1; Q3UU23; A0PJ97 Srp72 protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1; Signal recognition particle subunit SRP72 OS=Mus musculus OX=10090 GN=Srp72 PE=1 SV=1; Signal recognition particle subunit SRP72 OS=Mus musculus OX=10090 GN=Srp72 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1; Srp72 protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1 0 3 3 0.6936 0 1 1 1 560.64563 1679.92234 1679.9216 0.44 0.00025 0/0 0 0 13766056 HCD 30 MS2 10.64234 847.4 110 64.0143 18824 18824 18822 QEplus033719.raw F4 855.9 702.4 895.1 731.6 1000 899.6 419 4.08 1 FALSE 1.14E-05 5.79E-07 1.282 -250 88575 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSGQVLEVSGSK [K].rSGQVLEVSGSk.[A] N-Term(TMT6plex); K12(TMT6plex) 2 P62814 "V-type proton ATPase subunit B, brain isoform OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=1 SV=1" P62814; A0A1S6GWG6 "V-type proton ATPase subunit B, brain isoform OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=1 SV=1; Vacuolar proton pump subunit B OS=Mus musculus OX=10090 GN=Atp6v1b2 PE=2 SV=1" 1 3 3 0.5493 0 1 1 1 569.00586 1705.00302 1705.00085 1.27 0.00072 0/0 0 0 21182462 HCD 30 MS2 34.03081 1194.3 75.111 64.0211 18827 18827 18822 QEplus033719.raw F4 1222.7 903.8 1392.1 1037.7 1275.6 1334 433 4.26 1 FALSE 1.14E-05 6.21E-09 1.656 -250 88580 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LIEEETAR [K].lIEEETAR.[R] N-Term(TMT6plex) 3 Q3UL36 Arginine and glutamate-rich protein 1 OS=Mus musculus OX=10090 GN=Arglu1 PE=1 SV=2 A0A140LIS5; Q3UL36-2; Q3UL36 Arginine and glutamate-rich protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Arglu1 PE=1 SV=1; Isoform 2 of Arginine and glutamate-rich protein 1 OS=Mus musculus OX=10090 GN=Arglu1; Arginine and glutamate-rich protein 1 OS=Mus musculus OX=10090 GN=Arglu1 PE=1 SV=2 0 2 2 0.4853 0 1 1 1 595.33545 1189.66362 1189.66258 0.87 0.00052 0/0 0 0 13022404 HCD 30 MS2 35.75768 1103.1 110 64.0236 18828 18828 18822 QEplus033719.raw F4 1034.7 1007.9 1209.5 942.3 1269.3 1155.1 342 3.07 1 FALSE 1.14E-05 0.0005786 0.71 -250 88590 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVCDIPPR [K].tAVcDIPPR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 9 Q7TMM9; P99024; P68372; Q9CWF2 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1 Q7TMM9; Q9D6F9; Q62363; Q80ZV2; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2 "Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Beta-tubulin gene M-beta-2, 3' end (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1" 0 3 3 0.6217 0 1 1 1 419.89938 1257.6836 1257.68227 1.05 0.00044 0/0 0 0 10143161 HCD 30 MS2 68.94173 456.3 110 64.0261 18829 18829 18822 QEplus033719.raw F4 482.1 379.1 482.1 331.3 512.8 550.3 230 3.41 4 FALSE 1.14E-05 0.000488 0.724 -250 88597 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILSHGGFR [R].iLSHGGFR.[K] N-Term(TMT6plex) 2 Q3UXI9 DZF domain-containing protein OS=Mus musculus OX=10090 GN=Ilf2 PE=2 SV=1 Q3UXI9; Q9CXY6 DZF domain-containing protein OS=Mus musculus OX=10090 GN=Ilf2 PE=2 SV=1; Interleukin enhancer-binding factor 2 OS=Mus musculus OX=10090 GN=Ilf2 PE=1 SV=1 0 3 3 0.4253 0 1 1 1 372.55563 1115.65235 1115.65229 0.05 0.00002 0/0 0 0 9232016 HCD 30 MS2 10.38513 347.2 110 64.0285 18830 18830 18822 QEplus033719.raw F4 397.3 275.4 370.7 301.1 378.2 360.2 318 3.48 1 FALSE 0.0003496 0.006932 0.459 -250 88633 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATIEEAYSR [R].aTIEEAYSR.[S] N-Term(TMT6plex) 8 Q3UQN2 F-BAR domain only protein 2 OS=Mus musculus OX=10090 GN=Fcho2 PE=1 SV=1 A0A286YCL2; J3QPQ1; Q3UQN2-2; Q05CX7; A0A286YDL7; Q3UQN2-3; F6RG68; Q3UQN2 F-BAR domain only protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Fcho2 PE=1 SV=1; F-BAR domain only protein 2 OS=Mus musculus OX=10090 GN=Fcho2 PE=1 SV=1; Isoform 2 of F-BAR domain only protein 2 OS=Mus musculus OX=10090 GN=Fcho2; Fcho2 protein (Fragment) OS=Mus musculus OX=10090 GN=Fcho2 PE=2 SV=1; F-BAR domain only protein 2 OS=Mus musculus OX=10090 GN=Fcho2 PE=1 SV=1; Isoform 3 of F-BAR domain only protein 2 OS=Mus musculus OX=10090 GN=Fcho2; F-BAR domain only protein 2 OS=Mus musculus OX=10090 GN=Fcho2 PE=1 SV=3; F-BAR domain only protein 2 OS=Mus musculus OX=10090 GN=Fcho2 PE=1 SV=1 0 2 2 0.5165 0 1 1 1 634.83826 1268.66924 1268.6684 0.66 0.00042 0/0 0 0 2417126.5 HCD 30 MS2 46.1993 618.9 110 64.0434 18835 18835 18833 QEplus033719.raw F4 578.6 559.4 650.3 658.1 658 608.8 192 2.42 1 FALSE 1.14E-05 0.0001127 0.847 -250 88650 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFASPGQQK [R].eFASPGQQk.[K] N-Term(TMT6plex); K9(TMT6plex) 5 D3Z0I8 Transmembrane protein 109 (Fragment) OS=Mus musculus OX=10090 GN=Tmem109 PE=1 SV=1 D3Z0I8; D3YX08; D3Z3Z2; D3Z7P2; Q3UBX0 Transmembrane protein 109 (Fragment) OS=Mus musculus OX=10090 GN=Tmem109 PE=1 SV=1; Transmembrane protein 109 OS=Mus musculus OX=10090 GN=Tmem109 PE=1 SV=1; Transmembrane protein 109 (Fragment) OS=Mus musculus OX=10090 GN=Tmem109 PE=1 SV=1; Transmembrane protein 109 (Fragment) OS=Mus musculus OX=10090 GN=Tmem109 PE=1 SV=1; Transmembrane protein 109 OS=Mus musculus OX=10090 GN=Tmem109 PE=1 SV=2 0 3 3 0.5405 0 1 1 1 483.94217 1449.81195 1449.8102 1.21 0.00058 0/0 0 0 32759282 HCD 30 MS2 18.60132 875.8 60.551 64.0479 18837 18837 18833 QEplus033719.raw F4 861.9 672.9 978.8 811.3 874.6 1055 479 3.7 1 FALSE 3.35E-05 0.001329 0.637 -250 88666 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LFACSNR [R].lFAcSNR.[I] N-Term(TMT6plex); C4(Carbamidomethyl) 5 P13020-2 Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn Q3UCW8; Q3U9Q8; P13020-2; Q3TGJ9; P13020 Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Gelsolin OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=3 0 2 2 0.393 0 1 1 1 548.79254 1096.57781 1096.57708 0.66 0.00036 0/0 0 0 31966844 HCD 30 MS2 37.61742 815.8 32.408 64.0524 18839 18839 18833 QEplus033719.raw F4 779.4 790.6 973.7 663.1 891.4 796.3 123 2.29 1 FALSE 0.0008363 0.01158 0.38 -250 88676 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIYQATYR [R].aIYQATYR.[D] N-Term(TMT6plex) 2 O55234 Proteasome subunit beta type-5 OS=Mus musculus OX=10090 GN=Psmb5 PE=1 SV=3 Q8BTY5; O55234 Proteasome subunit beta type-5 OS=Mus musculus OX=10090 GN=Psmb5 PE=1 SV=1; Proteasome subunit beta type-5 OS=Mus musculus OX=10090 GN=Psmb5 PE=1 SV=3 0 2 2 0.5395 0 1 1 1 607.84009 1214.6729 1214.67309 -0.16 -0.00009 0/0 0 0 19025074 HCD 30 MS2 9.446957 1229.9 110 64.0549 18840 18840 18833 QEplus033719.raw F4 1213.6 1147.7 1412.7 1070.7 1317.5 1217.4 212 3.04 1 FALSE 2.26E-05 0.0009952 0.663 -250 88686 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSPGGPGTAGFPGGR [R].gSPGGPGTAGFPGGR.[G] N-Term(TMT6plex) 8 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; A0A087WPS3; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen alpha-1(III) chain (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 2 2 0.7051 0 1 1 1 750.89221 1500.77715 1500.77566 0.99 0.00075 0/0 0 0 16062114 HCD 30 MS2 47.67889 442.9 110 64.0574 18841 18841 18833 QEplus033719.raw F4 390.3 547.3 529.8 242.5 482.1 465.6 204 3.9 1 FALSE 1.14E-05 5.26E-08 1.48 -250 88691 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLEEQAALHK [R].rLEEQAALHk.[A] N-Term(TMT6plex); K10(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 4 4 0.6853 0 1 1 1 414.00189 1652.98574 1652.98481 0.56 0.00023 0/0 0 0 14351609 HCD 30 MS2 33.5664 810.7 88.147 64.0597 18842 18842 18833 QEplus033719.raw F4 1185.8 604.9 828.3 600.7 760.3 884.4 332 4.83 2 FALSE 1.14E-05 2.48E-06 1.162 -250 88697 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETGTEHSPGVQPADVK [R].eTGTEHSPGVQPADVk.[E] N-Term(TMT6plex); K16(TMT6plex) 4 Q8R0P4 Mth938 domain-containing protein OS=Mus musculus OX=10090 GN=Aamdc PE=1 SV=1 D3YWY5; Q8R0P4; D3YZD8; D3Z442 Mth938 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Aamdc PE=1 SV=1; Mth938 domain-containing protein OS=Mus musculus OX=10090 GN=Aamdc PE=1 SV=1; Mth938 domain-containing protein OS=Mus musculus OX=10090 GN=Aamdc PE=1 SV=1; Mth938 domain-containing protein OS=Mus musculus OX=10090 GN=Aamdc PE=1 SV=1 0 3 3 0.7554 0 1 1 1 704.04468 2110.11948 2110.11807 0.67 0.00047 0/0 0 0 10345139 HCD 30 MS2 5.803347 456.1 110 64.0622 18843 18843 18833 QEplus033719.raw F4 479 303.6 503.3 493.6 361 596.2 387 6.5 1 FALSE 1.14E-05 7.87E-14 2.586 -250 88704 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTETEESLAK [R].nTETEESLAk.[R] N-Term(TMT6plex); K10(TMT6plex) 3 Q64520 Guanylate kinase OS=Mus musculus OX=10090 GN=Guk1 PE=1 SV=2 Q64520; Q64520-2; E9Q7K1 Guanylate kinase OS=Mus musculus OX=10090 GN=Guk1 PE=1 SV=2; Isoform 2 of Guanylate kinase OS=Mus musculus OX=10090 GN=Guk1; Guanylate kinase OS=Mus musculus OX=10090 GN=Guk1 PE=1 SV=1 0 2 2 0.65 0 1 1 1 790.43237 1579.85747 1579.85794 -0.3 -0.00023 0/0 0 0 6053183 HCD 30 MS2 0 324 110 64.0695 18845 18845 18844 QEplus033719.raw F4 319.6 280.3 359.9 316.6 311.9 355.5 388 4 1 FALSE 1.14E-05 1.89E-08 1.565 -250 88722 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLAQADAEK [K].sLAQADAEk.[Q] N-Term(TMT6plex); K9(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.3724 0 1 1 1 695.90106 1390.79485 1390.79422 0.45 0.00032 0/0 0 0 72705744 HCD 30 MS2 43.77615 742.3 22.835 64.0764 18848 18848 18844 QEplus033719.raw F4 802.7 663.2 809.5 605.4 794.9 778.3 500 3.41 2 FALSE 1.14E-05 2.40E-06 1.165 -250 88731 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TESKPSVTEK [K].tESkPSVTEk.[E] N-Term(TMT6plex); K4(TMT6plex); K10(TMT6plex) 6 B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 A0PJ96; P14873; Q3TZM8; Q8CAI9; B2RQQ5; Q8CFR9 Mtap1b protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Mtap1b protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 0 3 3 0.5353 0 1 1 1 598.35974 1793.06467 1793.06234 1.3 0.00078 0/0 0 0 32770306 HCD 30 MS2 21.05243 1223.9 62.395 64.0786 18849 18849 18844 QEplus033719.raw F4 1320.9 895.3 1270.1 1105 1314.3 1437.9 383 2.41 1 FALSE 1.14E-05 0.0002107 0.795 -250 88771 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YVADCPINR [K].yVADcPINR.[H] N-Term(TMT6plex); C5(Carbamidomethyl) 6 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; G3UWS1; A0A571BF46; A2AQB2; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 2 2 0.6179 0 1 1 1 668.84515 1336.68303 1336.68809 -3.78 -0.00253 0/0 0 0 5461410.5 HCD 30 MS2 49.9117 740.6 110 64.0907 18854 18854 18844 QEplus033719.raw F4 743.6 478.6 745.7 932.8 550.1 992.6 188 2.8 1 FALSE 1.14E-05 8.44E-05 0.871 -250 88791 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLAQADAEK [K].sLAQADAEk.[Q] N-Term(TMT6plex); K9(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.554 0 1 1 1 464.27008 1390.79569 1390.79422 1.06 0.00049 0/0 0 0 38656800 HCD 30 MS2 26.93303 828.2 44.656 64.1027 18858 18858 18855 QEplus033719.raw F4 923.6 688.5 898.7 681.8 854.3 922.4 517 4.17 2 FALSE 1.14E-05 3.75E-05 0.938 -250 88798 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDLPNAEEKPR [K].qDLPNAEEkPR.[V] N-Term(TMT6plex); K9(TMT6plex) 4 Q61699 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2 D3Z3I9; E9Q0U7; Q61699; Q61699-2 Heat shock protein 105 kDa (Fragment) OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=1; Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=1; Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2; Isoform HSP105-beta of Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 0 3 3 0.6966 0 1 1 1 585.66547 1754.98185 1754.98012 0.98 0.00058 0/0 0 0 28432604 HCD 30 MS2 37.65195 1212.9 68.176 64.105 18859 18859 18855 QEplus033719.raw F4 1229.7 798.9 1244.2 1373.4 1075.1 1556.2 407 4.45 1 FALSE 1.14E-05 8.66E-09 1.629 -250 88804 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FIEAAQR [K].fIEAAQR.[Y] N-Term(TMT6plex) 5 Q14AI7 COP9 signalosome complex subunit 4 OS=Mus musculus OX=10090 GN=Cops4 PE=1 SV=1 Q14AI7; F6QTS1; Q3TIJ1; D3YV99; D3Z1R9 COP9 signalosome complex subunit 4 OS=Mus musculus OX=10090 GN=Cops4 PE=1 SV=1; COP9 signalosome complex subunit 4 (Fragment) OS=Mus musculus OX=10090 GN=Cops4 PE=1 SV=1; COP9 signalosome complex subunit 4 OS=Mus musculus OX=10090 GN=Cops4 PE=2 SV=1; COP9 signalosome complex subunit 4 (Fragment) OS=Mus musculus OX=10090 GN=Cops4 PE=1 SV=1; COP9 signalosome complex subunit 4 (Fragment) OS=Mus musculus OX=10090 GN=Cops4 PE=1 SV=1 0 2 2 0.381 0 1 1 1 532.30975 1063.61223 1063.60976 2.32 0.00124 0/0 0 0 25344580 HCD 30 MS2 47.77512 1384.1 62.998 64.1072 18860 18860 18855 QEplus033719.raw F4 1205.1 1255.7 1267.6 1033.3 2143.3 1399.8 254 2.31 1 FALSE 0.001248 0.0171 0.309 -250 88813 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHNAENIQPGEQK [K].iHNAENIQPGEQk.[Y] N-Term(TMT6plex); K13(TMT6plex) 14 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 Q3UZD9; Q6NZJ6-2; A0PJB5; A0A0J9YVC1; E9Q9E1; Q3UQI5; Q3UYM6; E9Q770; E9PVC5; E9PVC6; A0A0J9YUS5; A0A0J9YUC1; Q6NZJ6; Q3UTK0 MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 0 3 3 0.7586 0 1 1 1 646.02673 1936.06565 1936.06524 0.21 0.00013 0/0 0 0 15328053 HCD 30 MS2 26.5553 873.5 110 64.112 18862 18862 18855 QEplus033719.raw F4 881.3 724.1 956.6 761.1 954 963.7 454 5.22 1 FALSE 1.14E-05 1.85E-09 1.756 -250 88821 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FNDGTDEKK [R].fNDGTDEkk.[K] N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 1 3 3 0.5368 0 1 1 1 580.99652 1740.97501 1740.97353 0.85 0.00049 0/0 0 0 9858044 HCD 30 MS2 20.05153 1326.5 110 64.1145 18863 18863 18855 QEplus033719.raw F4 1286.9 1122.3 1398 1639.3 1185.9 1326.4 391 2.31 1 FALSE 0.001185 0.01606 0.32 -250 88828 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLLEGEESR [R].tLLEGEESR.[M] N-Term(TMT6plex) 2 P04264 "SWISS-PROT:P04264 Tax_Id=9606 Gene_Symbol=KRT1 Keratin, type II cytoskeletal 1" ENSEMBL:ENSBTAP00000038253; P04264 "(Bos taurus) 63 kDa protein; SWISS-PROT:P04264 Tax_Id=9606 Gene_Symbol=KRT1 Keratin, type II cytoskeletal 1" 0 2 2 0.5969 0 1 1 1 631.84698 1262.68669 1262.67896 6.12 0.00387 0/0 0 0 7889080.5 HCD 30 MS2 74.84843 1995.3 110 64.117 18864 18864 18855 QEplus033719.raw F4 1837.5 2250.2 2197.7 1440.7 2108 2137.7 299 1.91 1 TRUE 5.44E-05 0.002417 0.58 -250 88844 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EETSTSYAELR [K].eETSTSYAELR.[E] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.6442 0 1 1 1 757.88055 1514.75383 1514.75358 0.16 0.00012 0/0 0 0 7526982 HCD 30 MS2 0 333.6 110 64.1269 18867 18867 18866 QEplus033719.raw F4 365.6 151.9 290.5 505.7 203.1 484.8 96 4.16 2 FALSE 1.14E-05 4.95E-08 1.485 -250 88849 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVIDYNGER [R].tVIDYNGER.[T] N-Term(TMT6plex) 14 P09103 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2 P09103; Q3URP6; Q3TWE3; Q3U738; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; E9Q8G8; Q3UA23; Q3TIQ5; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Thioredoxin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 0 2 2 0.6506 0 1 1 1 648.34375 1295.68022 1295.6793 0.72 0.00046 0/0 0 0 11122657 HCD 30 MS2 14.13969 818.3 110 64.1294 18868 18868 18866 QEplus033719.raw F4 882 733.5 856.2 714 911.2 812.6 231 3.52 1 FALSE 1.14E-05 1.28E-06 1.217 -250 88859 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIEHTLNEK [K].qIEHTLNEk.[R] N-Term(TMT6plex); K9(TMT6plex) 10 P05132; P68181 cAMP-dependent protein kinase catalytic subunit alpha OS=Mus musculus OX=10090 GN=Prkaca PE=1 SV=3;cAMP-dependent protein kinase catalytic subunit beta OS=Mus musculus OX=10090 GN=Prkacb PE=1 SV=2 H6TMF6; P68181-4; P68181-3; A0A0G2JFT9; P68181-2; H6TMF5; P05132-2; J9JDU9; P05132; P68181 cAMP-dependent protein kinase catalytic subunit beta transcript variant 6 (Fragment) OS=Mus musculus OX=10090 GN=Prkacb PE=2 SV=1; Isoform 4 of cAMP-dependent protein kinase catalytic subunit beta OS=Mus musculus OX=10090 GN=Prkacb; Isoform 3 of cAMP-dependent protein kinase catalytic subunit beta OS=Mus musculus OX=10090 GN=Prkacb; cAMP-dependent protein kinase catalytic subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Prkacb PE=1 SV=1; Isoform 2 of cAMP-dependent protein kinase catalytic subunit beta OS=Mus musculus OX=10090 GN=Prkacb; cAMP-dependent protein kinase catalytic subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Prkacb PE=1 SV=1; Isoform 2 of cAMP-dependent protein kinase catalytic subunit alpha OS=Mus musculus OX=10090 GN=Prkaca; cAMP-dependent protein kinase catalytic subunit alpha isoform (Fragment) OS=Mus musculus OX=10090 GN=Prkaca PE=2 SV=1; cAMP-dependent protein kinase catalytic subunit alpha OS=Mus musculus OX=10090 GN=Prkaca PE=1 SV=3; cAMP-dependent protein kinase catalytic subunit beta OS=Mus musculus OX=10090 GN=Prkacb PE=1 SV=2 0 3 3 0.683 0 1 1 1 523.97235 1569.9025 1569.90008 1.54 0.00081 0/0 0 0 47423216 HCD 30 MS2 13.87728 812 41.134 64.1316 18869 18869 18866 QEplus033719.raw F4 840.6 584.1 923.6 740.8 781.5 1001.5 369 3.88 2 FALSE 1.14E-05 2.02E-05 0.989 -250 88896 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EELKPDQK [R].eELkPDQk.[Q] N-Term(TMT6plex); K4(TMT6plex); K8(TMT6plex) 3 Q8BMA6 Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=2 Q8BMA6; A2AAN2; Q8K258 Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=2; Signal recognition particle subunit SRP68 OS=Mus musculus OX=10090 GN=Srp68 PE=1 SV=1; Srp68 protein OS=Mus musculus OX=10090 GN=Srp68 PE=2 SV=1 0 3 3 0.1659 0 1 1 1 558.67328 1674.00528 1674.0041 0.71 0.0004 0/0 0 0 13266404 HCD 30 MS2 52.40425 949.5 66.644 64.1435 18874 18874 18866 QEplus033719.raw F4 925.2 790.4 1013.3 815.1 1135.2 1017.8 387 2.05 1 FALSE 0.002064 0.03783 0.182 -250 88905 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIVENAVQK [K].hIVENAVQk.[E] N-Term(TMT6plex); K9(TMT6plex) 4 Q8BKC5 Importin-5 OS=Mus musculus OX=10090 GN=Ipo5 PE=1 SV=3 Q8BKC5-2; Q7TN23; Q3TT04; Q8BKC5 Isoform 2 of Importin-5 OS=Mus musculus OX=10090 GN=Ipo5; Ipo5 protein (Fragment) OS=Mus musculus OX=10090 GN=Ipo5 PE=2 SV=1; Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Ipo5 PE=2 SV=1; Importin-5 OS=Mus musculus OX=10090 GN=Ipo5 PE=1 SV=3 0 3 3 0.6621 0 1 1 1 499.3045 1495.89896 1495.89968 -0.48 -0.00024 0/0 0 0 11763602 HCD 30 MS2 45.17405 1345.9 110 64.146 18875 18875 18866 QEplus033719.raw F4 1443.3 1110.3 1378.4 993.5 1761.6 1388 346 4.41 1 FALSE 1.14E-05 1.02E-05 1.046 -250 88910 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAGPASVPLR [K].qAGPASVPLR.[T] N-Term(TMT6plex) 1 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 0 2 2 0.4519 0 1 1 1 612.86792 1224.72856 1224.72619 1.94 0.00119 0/0 0 0 11593511 HCD 30 MS2 7.666904 884.6 110 64.1485 18876 18876 18866 QEplus033719.raw F4 889.6 677.6 967.6 789.8 920.9 1061.9 218 3.12 1 FALSE 1.14E-05 1.35E-06 1.212 -250 88924 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YVADCPINR [K].yVADcPINR.[H] N-Term(TMT6plex); C5(Carbamidomethyl) 6 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; G3UWS1; A0A571BF46; A2AQB2; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 2 2 0.5444 0 1 1 1 668.84729 1336.6873 1336.68809 -0.59 -0.00039 0/0 0 0 5579793.5 HCD 30 MS2 11.69434 689.1 110 64.1583 18879 18879 18877 QEplus033719.raw F4 678 432.7 683.8 920.3 480.7 938.9 183 2.48 1 FALSE 1.14E-05 0.0002028 0.798 -250 88943 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YHEEFEK [K].yHEEFEk.[S] N-Term(TMT6plex); K7(TMT6plex) 5 Q543N3 LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 A2A6H0; A2A6G8; Q543N3; A2A6G7; A2A6G9 LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=8; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 0 3 3 0.6239 0 1 1 1 480.59113 1439.75882 1439.7571 1.2 0.00057 0/0 0 0 53313676 HCD 30 MS2 50.63284 891.1 27.266 64.1651 18882 18882 18877 QEplus033719.raw F4 772 848.9 1113.3 680.8 992.9 938.7 241 3.43 1 FALSE 0.0002119 0.004306 0.519 -250 88954 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVEEDEYK [K].eVEEDEYk.[A] N-Term(TMT6plex); K8(TMT6plex) 5 Q3UBU0 HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1 Q3TUD6; Q3UBU0; Q91V38; Q8CCY5; P08113 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Heat shock protein 90, beta (Grp94), member 1 OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Endoplasmin OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=2" 0 3 3 0.4423 0 1 1 1 500.26105 1498.76859 1498.76773 0.58 0.00029 0/0 0 0 20908628 HCD 30 MS2 25.79878 1121.7 83.974 64.1696 18884 18884 18877 QEplus033719.raw F4 1190.4 936.3 1120.2 904.3 1381.2 1197.6 186 3.12 1 FALSE 0.001108 0.01442 0.34 -250 88960 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KSTVLQQQYNR [K].kSTVLQQQYNR.[V] N-Term(TMT6plex); K1(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 1 3 3 0.6358 0 1 1 1 608.35596 1823.05332 1823.05395 -0.35 -0.00021 0/0 0 0 15480041 HCD 30 MS2 14.55052 1001.7 85.203 64.1719 18885 18885 18877 QEplus033719.raw F4 925.6 980.9 1170.9 840.8 1114.7 977.6 416 4.64 1 FALSE 1.14E-05 5.98E-10 1.849 -250 88968 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLYSEK [R].sLYSEk.[E] N-Term(TMT6plex); K6(TMT6plex) 6 Q922R9 Trap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1 Q3TSG8; Q922R9; Q3UPJ8; Q9CQN1; Q3TK29; Q922Z3 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; Trap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; Heat shock protein 75 kDa, mitochondrial OS=Mus musculus OX=10090 GN=Trap1 PE=1 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1; Trap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Trap1 PE=2 SV=1" 0 2 2 0.0878 0 1 1 1 592.85083 1184.69438 1184.69271 1.41 0.00084 0/0 0 0 17105418 HCD 30 MS2 53.68698 1605 110 64.1744 18886 18886 18877 QEplus033719.raw F4 1541.5 1310.3 1721.3 1597.5 1571.2 1888.3 238 2.05 1 FALSE 0.004675 0.0823 0.055 -250 88978 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAMLPGAR [K].aAMLPGAR.[K] N-Term(TMT6plex) 2 Q9DBR1 5'-3' exoribonuclease 2 OS=Mus musculus OX=10090 GN=Xrn2 PE=1 SV=1 Q9DBR1; Q9DBR1-2 5'-3' exoribonuclease 2 OS=Mus musculus OX=10090 GN=Xrn2 PE=1 SV=1; Isoform 2 of 5'-3' exoribonuclease 2 OS=Mus musculus OX=10090 GN=Xrn2 0 2 2 0.3604 0 1 1 1 508.29907 1015.59087 1015.592 -1.12 -0.00057 0/0 0 0 8799512 HCD 30 MS2 24.95827 847.5 110 64.1769 18887 18887 18877 QEplus033719.raw F4 838.2 793.2 979.5 631.2 986.2 856.9 237 2.22 1 FALSE 0.002064 0.03789 0.182 -250 88990 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTNEWGK [K].kTNEWGk.[T] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 5 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q91VL4; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Col1a2 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 1 3 3 0.3287 0 1 1 1 517.31573 1549.93265 1549.93054 1.36 0.0007 0/0 0 0 17753846 HCD 30 MS2 21.15279 1404.8 82.905 64.1912 18892 18892 18888 QEplus033719.raw F4 1558.1 1063.9 1379.8 1460.4 1737.9 1228.8 418 2.89 1 FALSE 0.0007816 0.0108 0.392 -250 88997 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLEEQAALHK [R].rLEEQAALHk.[A] N-Term(TMT6plex); K10(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.6974 0 1 1 1 551.66821 1652.99009 1652.98481 3.19 0.00176 0/0 0 0 13188758 HCD 30 MS2 27.00861 1013.3 87.545 64.1935 18893 18893 18888 QEplus033719.raw F4 1107.2 876.7 1055.6 838.6 1167 1035 336 5.32 2 FALSE 1.14E-05 1.02E-09 1.805 -250 89003 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QALAHGLK [K].qALAHGLk.[C] N-Term(TMT6plex); K8(TMT6plex) 1 Q99KI0 "Aconitate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Aco2 PE=1 SV=1" Q99KI0 "Aconitate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Aco2 PE=1 SV=1" 0 3 3 0.3812 0 1 1 1 432.61206 1295.82163 1295.81998 1.27 0.00055 0/0 0 0 13817662 HCD 30 MS2 42.1644 805.3 96.779 64.1958 18894 18894 18888 QEplus033719.raw F4 933 609.2 862.1 791.5 725 911.2 113 3.41 1 FALSE 1.14E-05 0.0001451 0.826 -250 89017 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIYESDK [R].eIYESDk.[C] N-Term(TMT6plex); K7(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.5199 0 1 1 1 671.36902 1341.73076 1341.73022 0.4 0.00027 0/0 0 0 10249972 HCD 30 MS2 5.819992 809 110 64.2008 18896 18896 18888 QEplus033719.raw F4 907.6 245.6 729.3 1358.3 310.2 1302.8 260 2.77 2 FALSE 0.0003996 0.007224 0.454 -250 89022 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIEHTLNEK [K].qIEHTLNEk.[R] N-Term(TMT6plex); K9(TMT6plex) 10 P05132; P68181 cAMP-dependent protein kinase catalytic subunit alpha OS=Mus musculus OX=10090 GN=Prkaca PE=1 SV=3;cAMP-dependent protein kinase catalytic subunit beta OS=Mus musculus OX=10090 GN=Prkacb PE=1 SV=2 H6TMF6; P68181-4; P68181-3; A0A0G2JFT9; P68181-2; H6TMF5; P05132-2; J9JDU9; P05132; P68181 cAMP-dependent protein kinase catalytic subunit beta transcript variant 6 (Fragment) OS=Mus musculus OX=10090 GN=Prkacb PE=2 SV=1; Isoform 4 of cAMP-dependent protein kinase catalytic subunit beta OS=Mus musculus OX=10090 GN=Prkacb; Isoform 3 of cAMP-dependent protein kinase catalytic subunit beta OS=Mus musculus OX=10090 GN=Prkacb; cAMP-dependent protein kinase catalytic subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Prkacb PE=1 SV=1; Isoform 2 of cAMP-dependent protein kinase catalytic subunit beta OS=Mus musculus OX=10090 GN=Prkacb; cAMP-dependent protein kinase catalytic subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Prkacb PE=1 SV=1; Isoform 2 of cAMP-dependent protein kinase catalytic subunit alpha OS=Mus musculus OX=10090 GN=Prkaca; cAMP-dependent protein kinase catalytic subunit alpha isoform (Fragment) OS=Mus musculus OX=10090 GN=Prkaca PE=2 SV=1; cAMP-dependent protein kinase catalytic subunit alpha OS=Mus musculus OX=10090 GN=Prkaca PE=1 SV=3; cAMP-dependent protein kinase catalytic subunit beta OS=Mus musculus OX=10090 GN=Prkacb PE=1 SV=2 0 2 2 0.5536 0 1 1 1 785.45581 1569.90434 1569.90008 2.72 0.00213 0/0 0 0 5065268 HCD 30 MS2 13.8489 322.9 110 64.2033 18897 18897 18888 QEplus033719.raw F4 322.7 208.2 361.6 291.6 326.3 426.7 376 4.01 2 FALSE 1.14E-05 3.64E-07 1.321 -250 89032 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEAQQPMHPKPLSPDAR [K].sEAQQPMHPkPLSPDAR.[T] N-Term(TMT6plex); K10(TMT6plex) 5 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q8CD09; Q9ERG0; Q8C7S2; Q8C3R7; Q8BT15 LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 0 4 4 0.7757 0 1 1 1 587.57111 2347.26259 2347.25927 1.42 0.00083 0/0 0 0 12940156 HCD 30 MS2 23.36904 429.1 110 64.2058 18898 18898 18888 QEplus033719.raw F4 415.3 454.7 529.4 329.6 425.4 420.4 413 5.75 1 FALSE 1.14E-05 3.86E-11 2.075 -250 89046 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSNYISK [R].dSNYISk.[G] N-Term(TMT6plex); K7(TMT6plex) 7 P05622 Platelet-derived growth factor receptor beta OS=Mus musculus OX=10090 GN=Pdgfrb PE=1 SV=2 P05622; Q3TZ27; Q003I5; Q7TMR8; P05622-2; Q3UYC9; E9QN12 Platelet-derived growth factor receptor beta OS=Mus musculus OX=10090 GN=Pdgfrb PE=1 SV=2; Receptor protein-tyrosine kinase (Fragment) OS=Mus musculus OX=10090 GN=Pdgfrb PE=2 SV=1; Receptor protein-tyrosine kinase OS=Mus musculus OX=10090 GN=Pdgfrb PE=2 SV=1; Platelet-derived growth factor receptor beta OS=Mus musculus OX=10090 GN=Pdgfrb PE=2 SV=1; Isoform 2 of Platelet-derived growth factor receptor beta OS=Mus musculus OX=10090 GN=Pdgfrb; Platelet-derived growth factor receptor beta OS=Mus musculus OX=10090 GN=Pdgfrb PE=2 SV=1; Platelet-derived growth factor receptor beta OS=Mus musculus OX=10090 GN=Pdgfrb PE=1 SV=1 0 2 2 0.2624 0 1 1 1 642.8642 1284.72112 1284.71999 0.88 0.00056 0/0 0 0 13219426 HCD 30 MS2 28.5792 934.6 110 64.2156 18901 18901 18899 QEplus033719.raw F4 848.9 966.2 1018.5 669.3 1307.9 796.8 288 2.82 1 FALSE 0.0002909 0.006037 0.478 -250 89055 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YLSNAYAR [R].yLSNAYAR.[E] N-Term(TMT6plex) 2 Q542F1 Chloride intracellular channel protein OS=Mus musculus OX=10090 GN=Clic1 PE=1 SV=1 Q3TIP8; Q542F1 Chloride intracellular channel protein OS=Mus musculus OX=10090 GN=Clic1 PE=2 SV=1; Chloride intracellular channel protein OS=Mus musculus OX=10090 GN=Clic1 PE=1 SV=1 0 2 2 0.424 0 1 1 1 593.82538 1186.64348 1186.64179 1.43 0.00085 0/0 0 0 13881484 HCD 30 MS2 46.4592 1403.8 110 64.2227 18904 18904 18899 QEplus033719.raw F4 1303.9 1420.6 1551.5 1204.4 1586.2 1356.1 221 2.17 1 FALSE 0.0002119 0.004312 0.519 -250 89070 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CTDDFNGAQCK [R].cTDDFNGAQck.[A] N-Term(TMT6plex); C1(Carbamidomethyl); C10(Carbamidomethyl); K11(TMT6plex) 8 O88685 26S proteasome regulatory subunit 6A OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=2 Q3TKC2; Q3THI5; O88685; A2AGN7; B7ZCF1; Q8BUP7; Q3U8Y7; Q3TKG4 AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1; AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1; 26S proteasome regulatory subunit 6A OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=2; 26S proteasome regulatory subunit 6A OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=1; 26S proteasome regulatory subunit 6A OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=1; AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1; AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1; AAA domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1 0 2 2 0.7289 0 1 1 1 887.4173 1773.82732 1773.83003 -1.53 -0.00135 0/0 0 0 5384650.5 HCD 30 MS2 0 375.5 110 64.2302 18907 18907 18899 QEplus033719.raw F4 391.8 291.5 430.4 342.8 335.3 461.2 59 4.5 1 FALSE 1.14E-05 5.49E-09 1.667 -250 89083 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVCEEAGVK [R].eVcEEAGVk.[G] N-Term(TMT6plex); C3(Carbamidomethyl); K9(TMT6plex) 7 A0A3B2W864 "Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" Q9JI46; H3BLR8; I1E4X7; B2KF67; A0A338P6L9; A0A3B2W864; A0A338P6T6 "Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Mus musculus OX=10090 GN=Nudt3 PE=1 SV=1; Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Mus musculus OX=10090 GN=Nudt3 PE=1 SV=1; Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Mus musculus OX=10090 GN=Nudt3 PE=1 SV=1; Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Mus musculus OX=10090 GN=Nudt3 PE=1 SV=1; Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Mus musculus OX=10090 GN=Nudt3 PE=1 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1; Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Mus musculus OX=10090 GN=Nudt3 PE=1 SV=1" 0 2 2 0.5409 0 1 1 1 739.90009 1478.79289 1478.7925 0.27 0.0002 0/0 0 0 3245287.25 HCD 30 MS2 0 536 110 64.2352 18909 18909 18899 QEplus033719.raw F4 543.3 449.8 594.8 426.3 636.4 565.3 325 4.03 1 FALSE 1.14E-05 6.93E-07 1.268 -250 89092 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVCDIPPR [K].tAVcDIPPR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 9 Q7TMM9; P99024; P68372; Q9CWF2 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1 Q7TMM9; Q9D6F9; Q62363; Q80ZV2; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2 "Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Beta-tubulin gene M-beta-2, 3' end (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1" 0 2 2 0.6667 0 1 1 1 629.34552 1257.68376 1257.68227 1.18 0.00075 0/0 0 0 71205792 HCD 30 MS2 8.682371 702.1 31.061 64.2425 18911 18911 18910 QEplus033719.raw F4 736.5 653.2 730.5 535.5 873 683.7 230 2.94 4 FALSE 1.14E-05 5.02E-05 0.914 -250 89112 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAPAPPKAEAK [K-].eAPAPPkAEAk.[A] N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex) 3 Q4V9X9 Rpl23a protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl23a PE=2 SV=1 Q4V9X9; Q91YK6; P62751 Rpl23a protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl23a PE=2 SV=1; Rpl23a protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl23a PE=2 SV=1; 60S ribosomal protein L23a OS=Mus musculus OX=10090 GN=Rpl23a PE=1 SV=1 1 3 3 0.6717 0 1 1 1 599.36902 1796.0925 1796.0885 2.23 0.00134 0/0 0 0 36219240 HCD 30 MS2 24.55809 1241.1 49.564 64.2495 18914 18914 18910 QEplus033719.raw F4 1192.2 1414.7 1388 1066.9 1178 1206.7 248 3.29 1 FALSE 1.14E-05 0.0005583 0.713 -250 89136 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALQTTYGTNAPR [K].aLQTTYGTNAPR.[M] N-Term(TMT6plex) 1 Q8CG76 Aflatoxin B1 aldehyde reductase member 2 OS=Mus musculus OX=10090 GN=Akr7a2 PE=1 SV=3 Q8CG76 Aflatoxin B1 aldehyde reductase member 2 OS=Mus musculus OX=10090 GN=Akr7a2 PE=1 SV=3 0 2 2 0.7296 0 1 1 1 761.41547 1521.82366 1521.82227 0.91 0.00069 0/0 0 0 10451320 HCD 30 MS2 0 349.3 110 64.2568 18917 18917 18910 QEplus033719.raw F4 338.6 279.4 381.7 305.2 447.6 343 392 4.29 1 FALSE 1.14E-05 1.30E-10 1.976 -250 89146 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VACETVAK [K].vAcETVAk.[T] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 9 Q99J57 S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=1 SV=1 A0A0U1RNT6; Q99J57; Q3UAP7; A0A0U1RQ95; A0A0U1RNK6; Q3TSS0; Q3TED1; Q6PE05; Q3UZA2 S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=1 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=1 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=2 SV=1; S-adenosylmethionine synthase isoform type-2 (Fragment) OS=Mus musculus OX=10090 GN=Mat2a PE=1 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=1 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=2 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=2 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=2 SV=1; S-adenosylmethionine synthase OS=Mus musculus OX=10090 GN=Mat2a PE=2 SV=1 0 2 2 0.4846 0 1 1 1 668.38733 1335.76738 1335.77064 -2.44 -0.00163 0/0 0 0 7625809 HCD 30 MS2 36.27771 987.1 110 64.2593 18918 18918 18910 QEplus033719.raw F4 1046.9 773.8 1046.7 850.6 1086.7 1117.9 424 3.57 1 FALSE 1.14E-05 6.79E-05 0.889 -250 89153 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SASASPLTPCSAPR [R].sASASPLTPcSAPR.[S] N-Term(TMT6plex); C10(Carbamidomethyl) 5 A2AJI0 MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1 A2AJI1; A2AJI0; A2AJI0-2; F6WF36; A8Y5P4 MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1; MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1; Isoform 2 of MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1; MAP7 domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1; MAP7 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Map7d1 PE=1 SV=1 0 2 2 0.7974 0 1 1 1 815.92413 1630.84099 1630.84202 -0.63 -0.00052 0/0 0 0 4166047 HCD 30 MS2 0 222.1 110 64.2619 18919 18919 18910 QEplus033719.raw F4 216.7 155.1 277.4 186.9 230.5 266.2 222 4.59 1 FALSE 1.14E-05 2.61E-10 1.918 -250 89177 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMLQQSK [R].eMLQQSk.[I] N-Term(TMT6plex); K7(TMT6plex) 12 P07901; Q71LX8 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4;Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q3TKB9; P07901; Q3TJU7; Q811H6; Q3TKA2; Q80YC2; E9Q3D6; Q3UIF3; A0PJ91; Q71LX8; Q3TKG0; Q8C5U3 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Heat shock protein HSP 90-beta (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 0 2 2 0.4572 0 1 1 1 661.3822 1321.75713 1321.75499 1.62 0.00107 0/0 0 0 68770072 HCD 30 MS2 25.81235 1128.8 25.822 64.2764 18924 18924 18921 QEplus033719.raw F4 1214.4 922.7 1167.1 877.6 1393.6 1197.2 416 3.04 2 FALSE 0.0008096 0.01115 0.386 -250 89192 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGQGHCVSGMGMGR [R].iGQGHcVSGMGMGR.[G] N-Term(TMT6plex); C6(Carbamidomethyl) 5 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q99L19; Q61554; Q7TMG6; Q3TNW1 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fbn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Fbn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1 0 3 3 0.82 0 1 1 1 559.27332 1675.80539 1675.80282 1.54 0.00086 0/0 0 0 23990676 HCD 30 MS2 49.10593 774.3 61.111 64.2809 18926 18926 18921 QEplus033719.raw F4 786.7 569.7 799.3 756.2 884.4 849.6 110 4.39 1 FALSE 1.14E-05 7.35E-08 1.453 -250 89198 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMDMGAK [R].gMDMGAk.[V] N-Term(TMT6plex); K7(TMT6plex) 3 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 Q3U5J2; A0A0R4J0I9; Q91ZX7 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 0 2 2 0.5477 0 1 1 1 584.31708 1167.62688 1167.62662 0.22 0.00013 0/0 0 0 16533635 HCD 30 MS2 9.640145 1747.1 110 64.2835 18927 18927 18921 QEplus033719.raw F4 1648.9 1534.2 1874 1524.3 2016.2 1885.1 137 2.41 1 FALSE 0.001101 0.01428 0.342 -250 89224 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNNEIVDK [K].dNNEIVDk.[I] N-Term(TMT6plex); K8(TMT6plex) 6 Q5SSL4 Active breakpoint cluster region-related protein OS=Mus musculus OX=10090 GN=Abr PE=1 SV=1 Q5SSL4; Q5SSL4-2; A0A571BG95; Q5SSL4-4; E9PUE7; Q5SSL4-3 Active breakpoint cluster region-related protein OS=Mus musculus OX=10090 GN=Abr PE=1 SV=1; Isoform 2 of Active breakpoint cluster region-related protein OS=Mus musculus OX=10090 GN=Abr; Active breakpoint cluster region-related protein OS=Mus musculus OX=10090 GN=Abr PE=1 SV=1; Isoform 4 of Active breakpoint cluster region-related protein OS=Mus musculus OX=10090 GN=Abr; Active breakpoint cluster region-related protein OS=Mus musculus OX=10090 GN=Abr PE=1 SV=1; Isoform 3 of Active breakpoint cluster region-related protein OS=Mus musculus OX=10090 GN=Abr 0 2 2 0.4572 0 1 1 1 702.89227 1404.77727 1404.77348 2.7 0.00189 0/0 0 0 10161707 HCD 30 MS2 0 606.2 110 64.291 18930 18930 18921 QEplus033719.raw F4 628.5 496.8 674.7 533.9 590 713 379 3.04 1 FALSE 1.14E-05 0.0002239 0.79 -250 89239 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVEPEPTEEK [K].eVEPEPTEEk.[D] N-Term(TMT6plex); K10(TMT6plex) 2 Q99L45 Eukaryotic translation initiation factor 2 subunit 2 OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1 E0CXJ3; Q99L45 Eukaryotic translation initiation factor 2 subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1; Eukaryotic translation initiation factor 2 subunit 2 OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1 0 2 2 0.5751 0 1 1 1 822.9425 1644.87773 1644.87325 2.72 0.00224 0/0 0 0 6979289.5 HCD 30 MS2 54.07063 440.6 110 64.3033 18934 18934 18932 QEplus033719.raw F4 511 354.7 469.2 339.5 504.4 464.5 285 3.46 1 FALSE 1.14E-05 7.22E-08 1.454 -250 89245 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTDLQR [KR].lTDLQR.[SD] N-Term(TMT6plex) 6 Q70FJ1; Q8VHX6 A-kinase anchor protein 9 OS=Mus musculus OX=10090 GN=Akap9 PE=1 SV=2;Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q70FJ1; E9QQ10; Q70FJ1-2; Q70FJ1-3; Q8VHX6-2; Q8VHX6 A-kinase anchor protein 9 OS=Mus musculus OX=10090 GN=Akap9 PE=1 SV=2; A-kinase anchor protein 9 OS=Mus musculus OX=10090 GN=Akap9 PE=1 SV=1; Isoform 2 of A-kinase anchor protein 9 OS=Mus musculus OX=10090 GN=Akap9; Isoform 3 of A-kinase anchor protein 9 OS=Mus musculus OX=10090 GN=Akap9; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.0503 0 1 1 1 487.79608 974.58489 974.58321 1.72 0.00084 0/0 0 0 54433944 HCD 30 MS2 30.87297 691.9 24.392 64.3056 18935 18935 18932 QEplus033719.raw F4 721.3 464.4 809.4 818.5 441.9 895.8 303 1.99 2 FALSE 0.002793 0.05477 0.128 -250 89261 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EINEVK [K].eINEVk.[M] N-Term(TMT6plex); K6(TMT6plex) 1 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 0 2 2 0.2244 0 1 1 2 595.36407 1189.72087 1189.71926 1.36 0.00081 0/0 0 0 35807920 HCD 30 MS2 21.02525 1520.8 59.875 64.3101 18937 18937 18932 QEplus033719.raw F4 1569.5 1297.3 1431.4 1198.8 2282.8 1345.1 633 2.54 1 FALSE 0.003182 0.06203 0.109 -250 89267 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEEILSGAQR [R].gEEILSGAQR.[I] N-Term(TMT6plex) 5 Q922B2 "Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars1 PE=1 SV=2" Q922B2; Q3TMC5; Q3TF87; Q3UJQ3; Q8BK18 "Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars1 PE=1 SV=2; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1" 0 2 2 0.4683 0 1 1 1 644.85651 1288.70574 1288.70585 -0.08 -0.00005 0/0 0 0 34113492 HCD 30 MS2 9.277884 968.9 66.549 64.3124 18938 18938 18932 QEplus033719.raw F4 1026.6 749.4 1038.5 943.5 923.5 1132.2 320 3.78 1 FALSE 1.14E-05 3.94E-06 1.124 -250 89275 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLLEGEESR [R].tLLEGEESR.[M] N-Term(TMT6plex) 2 P04264 "SWISS-PROT:P04264 Tax_Id=9606 Gene_Symbol=KRT1 Keratin, type II cytoskeletal 1" ENSEMBL:ENSBTAP00000038253; P04264 "(Bos taurus) 63 kDa protein; SWISS-PROT:P04264 Tax_Id=9606 Gene_Symbol=KRT1 Keratin, type II cytoskeletal 1" 0 2 2 0.6462 0 1 1 1 631.84302 1262.67876 1262.67896 -0.16 -0.0001 0/0 0 0 31400522 HCD 30 MS2 26.10693 1515.6 62.79 64.3146 18939 18939 18932 QEplus033719.raw F4 1370.6 1625.6 1553.7 1278.8 1729.9 1535.1 250 3.25 1 TRUE 1.14E-05 8.07E-05 0.875 -250 89288 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETEFQK [R].eTEFQk.[L] N-Term(TMT6plex); K6(TMT6plex) 2 P13542 Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.52 0 1 1 1 620.35278 1239.69829 1239.69852 -0.19 -0.00012 0/0 0 0 21251900 HCD 30 MS2 4.406759 1615.6 81.607 64.3192 18941 18941 18932 QEplus033719.raw F4 1824.7 350.5 919 3388.9 504.9 2705.6 293 2.25 1 FALSE 0.005014 0.08695 0.043 -250 89294 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEPGGGAEAQAVR [K].lEPGGGAEAQAVR.[Y] N-Term(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.6094 0 1 1 1 742.40796 1483.80864 1483.80662 1.36 0.00101 0/0 0 0 16850898 HCD 30 MS2 41.72167 774.3 80.842 64.3215 18942 18942 18932 QEplus033719.raw F4 864.5 634.6 870.1 729.7 752.1 795 307 2.97 1 FALSE 1.14E-05 9.99E-10 1.807 -250 89303 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTLVQTK [K].gTLVQTk.[G] N-Term(TMT6plex); K7(TMT6plex) 5 P43274; Q1WWK3; P43275 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2;Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1;Histone H1.1 OS=Mus musculus OX=10090 GN=H1-1 PE=1 SV=2 P43274; Q1WWK3; P43275; P43276; P43277 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2; Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1; Histone H1.1 OS=Mus musculus OX=10090 GN=H1-1 PE=1 SV=2; Histone H1.5 OS=Mus musculus OX=10090 GN=H1-5 PE=1 SV=2; Histone H1.3 OS=Mus musculus OX=10090 GN=H1-3 PE=1 SV=2 0 2 2 0.3826 0 1 1 1 602.88745 1204.76763 1204.76654 0.9 0.00054 0/0 0 0 843005888 HCD 30 MS2 6.730402 999.5 2.346 64.3288 18944 18944 18943 QEplus033719.raw F4 821.5 1106 1059.8 589.1 1611.4 809.4 223 2.98 3 FALSE 0.001877 0.03161 0.209 -250 89323 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPAAAAVTK [K].kPAAAAVTk.[K] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 2 P15864 Histone H1.2 OS=Mus musculus OX=10090 GN=H1-2 PE=1 SV=2 Q3UXH2; P15864 H15 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=H1f2 PE=2 SV=1; Histone H1.2 OS=Mus musculus OX=10090 GN=H1-2 PE=1 SV=2 0 3 3 0.5505 0 1 1 1 515.34277 1544.01377 1544.01387 -0.07 -0.00004 0/0 0 0 237503840 HCD 30 MS2 60.71196 1069.9 5.762 64.3333 18946 18946 18943 QEplus033719.raw F4 1225.5 468.7 1000.1 1541.8 692.9 1490.5 135 3.96 1 FALSE 1.14E-05 4.03E-05 0.932 -250 89332 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KIEMVR [K].kIEMVR.[A] N-Term(TMT6plex); K1(TMT6plex) 1 A8IP69 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 A8IP69 14-3-3 protein gamma subtype OS=Mus musculus OX=10090 GN=Ywhag PE=1 SV=1 1 3 3 0.403 0 1 1 1 411.93042 1233.77671 1233.77533 1.11 0.00046 0/0 0 0 94278200 HCD 30 MS2 24.81354 844 13.552 64.3355 18947 18947 18943 QEplus033719.raw F4 927.1 628 921.9 773.1 734.5 1079.4 255 2.01 1 FALSE 0.006816 0.1083 -0.016 -250 89341 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMLQQSK [R].eMLQQSk.[I] N-Term(TMT6plex); K7(TMT6plex) 12 P07901; Q71LX8 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4;Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q3TKB9; P07901; Q3TJU7; Q811H6; Q3TKA2; Q80YC2; E9Q3D6; Q3UIF3; A0PJ91; Q71LX8; Q3TKG0; Q8C5U3 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Heat shock protein HSP 90-beta (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 0 3 3 0.3881 0 1 1 1 441.25665 1321.75541 1321.75499 0.31 0.00014 0/0 0 0 54375748 HCD 30 MS2 32.7161 652.6 22.583 64.3378 18948 18948 18943 QEplus033719.raw F4 726.9 502.4 687.3 518.4 678.9 801.8 460 2.68 2 FALSE 0.002173 0.04169 0.168 -250 89360 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLEMSAEAER [R].qLEMSAEAER.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5814 0 1 1 1 696.85419 1392.7011 1392.69905 1.47 0.00103 0/0 0 0 35083732 HCD 30 MS2 49.51871 758.2 47.086 64.3423 18950 18950 18943 QEplus033719.raw F4 755.7 622 834.4 708.2 744.2 884.8 169 3.44 2 FALSE 1.14E-05 4.36E-07 1.306 -250 89369 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVSDGNINSDR [R].lVSDGNINSDR.[I] N-Term(TMT6plex) 4 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q62261; A0A0A0MQG2; Q5DTR4; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; MKIAA4049 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 2 2 0.686 0 1 1 1 709.87769 1418.74809 1418.74369 3.11 0.0022 0/0 0 0 30037692 HCD 30 MS2 18.67292 891.2 110 64.3449 18951 18951 18943 QEplus033719.raw F4 882.2 734.7 1082.2 702.9 878.2 1067 248 3.63 2 FALSE 1.14E-05 1.01E-07 1.426 -250 89379 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESTMYPK [R].eSTMYPk.[A] N-Term(TMT6plex); K7(TMT6plex) 1 Q8BK67 Protein RCC2 OS=Mus musculus OX=10090 GN=Rcc2 PE=1 SV=1 Q8BK67 Protein RCC2 OS=Mus musculus OX=10090 GN=Rcc2 PE=1 SV=1 0 2 2 0.6611 0 1 1 1 657.36292 1313.71855 1313.71754 0.77 0.0005 0/0 0 0 20454868 HCD 30 MS2 3.553321 1284 110 64.3474 18952 18952 18943 QEplus033719.raw F4 1324.2 1526.6 1416.9 823.8 1586.5 1026.2 270 2.39 1 FALSE 0.0009075 0.01254 0.365 -250 89386 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNADTDGMVK [K].tNADTDGMVk.[I] N-Term(TMT6plex); K10(TMT6plex) 2 O08749 "Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Dld PE=1 SV=2" O08749; Q3TIE8 "Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Dld PE=1 SV=2; Dihydrolipoyl dehydrogenase OS=Mus musculus OX=10090 GN=Dld PE=2 SV=1" 0 2 2 0.6452 0 1 1 1 755.40363 1509.79997 1509.79831 1.1 0.00083 0/0 0 0 19468362 HCD 30 MS2 0 1069.4 110 64.3499 18953 18953 18943 QEplus033719.raw F4 1167.6 845.2 1176.3 1179 849.4 1198.9 290 3.72 1 FALSE 1.14E-05 1.26E-05 1.028 -250 89402 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDMTYAVR [K].eDMTYAVR.[K] N-Term(TMT6plex) 5 H7BX95 Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1 F7AI47; Q6PDM2-2; Q6PDM2-3; H7BX95; Q6PDM2 Serine/arginine-rich-splicing factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1; Isoform 2 of Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1; Isoform 3 of Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1; Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1; Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=3 0 2 2 0.7256 0 1 1 1 607.30878 1213.61028 1213.60844 1.51 0.00092 0/0 0 0 18446862 HCD 30 MS2 21.551 1296.9 110 64.3597 18956 18956 18954 QEplus033719.raw F4 1285.6 1234.7 1387.8 1022.3 1608.2 1243.1 103 3.28 1 FALSE 1.14E-05 0.0001641 0.816 -250 89408 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYELHPDK [K].nYELHPDk.[Y] N-Term(TMT6plex); K8(TMT6plex) 20 Q3TXL5 Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1 Q3UCW4; Q05BF3; Q3TIR0; Q3TWL1; Q3TXL5; Q8C243; Q8VCK2; Q3U7P0; F6Y6L6; Q3U651; Q3U8W5; Q3TWD0; Q3U7I9; Q3TWR6; Q3TJN3; P18242; Q3UAQ1; F8WIR1; A0A1B0GT66; Q3UC89 "Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Ctsd protein OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D (Fragment) OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Peptidase A1 domain-containing protein OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Ctsd protein (Fragment) OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Predicted gene, 49369 (Fragment) OS=Mus musculus OX=10090 GN=Gm49369 PE=1 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=1 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=1 SV=2; Predicted gene, 49369 (Fragment) OS=Mus musculus OX=10090 GN=Gm49369 PE=1 SV=1; Cathepsin D OS=Mus musculus OX=10090 GN=Ctsd PE=2 SV=1" 0 3 3 0.6282 0 1 1 1 491.94217 1473.81195 1473.8102 1.19 0.00058 0/0 0 0 86295296 HCD 30 MS2 15.55449 621.9 16.496 64.362 18957 18957 18954 QEplus033719.raw F4 637.6 535.7 609.4 662.6 617 669 316 3.12 1 FALSE 0.0002119 0.004336 0.518 -250 89431 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDQTEYLEER [K].eDQTEYLEER.[R-] N-Term(TMT6plex) 11 P07901; Q71LX8 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4;Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q3TKB9; P07901; Q3TJU7; B7ZC50; Q3TKA2; Q3UIF3; A0PJ91; Q8C2A9; Q71LX8; Q3TKG0; Q8C5U3 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 0 2 2 0.6805 0 1 1 1 770.87103 1540.73479 1540.73285 1.26 0.00097 0/0 0 0 21815694 HCD 30 MS2 21.56282 792 110 64.369 18960 18960 18954 QEplus033719.raw F4 854 516.5 828.1 815.9 761.1 976.6 76 4.1 2 FALSE 1.14E-05 7.34E-08 1.453 -250 89437 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNADTDGMVK [K].tNADTDGMVk.[I] N-Term(TMT6plex); K10(TMT6plex) 2 O08749 "Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Dld PE=1 SV=2" O08749; Q3TIE8 "Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Dld PE=1 SV=2; Dihydrolipoyl dehydrogenase OS=Mus musculus OX=10090 GN=Dld PE=2 SV=1" 0 3 3 0.6096 0 1 1 1 503.93845 1509.80078 1509.79831 1.64 0.00082 0/0 0 0 18178078 HCD 30 MS2 50.80053 1010 77.661 64.3713 18961 18961 18954 QEplus033719.raw F4 1173.5 790.9 1115.8 939.1 911.7 1128.9 289 3.33 1 FALSE 1.14E-05 2.32E-06 1.168 -250 89477 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAQEEESEAK [R].lAQEEESEAk.[R] N-Term(TMT6plex); K10(TMT6plex) 2 Q9EQ61 Pescadillo homolog OS=Mus musculus OX=10090 GN=Pes1 PE=1 SV=1 Q9EQ61; Q5SQ20 Pescadillo homolog OS=Mus musculus OX=10090 GN=Pes1 PE=1 SV=1; Pescadillo homolog OS=Mus musculus OX=10090 GN=Pes1 PE=1 SV=1 0 2 2 0.716 0 1 1 1 796.43359 1591.85991 1591.85794 1.24 0.00099 0/0 0 0 6308223 HCD 30 MS2 0 331.4 110 64.3886 18967 18967 18965 QEplus033719.raw F4 344.5 301.6 369.6 246.6 380.1 345.9 338 4.12 1 FALSE 1.14E-05 1.79E-08 1.569 -250 89485 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQYESVAAK [R].qQYESVAAk.[N] N-Term(TMT6plex); K9(TMT6plex) 8 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 3 3 0.6702 0 1 1 1 494.61768 1481.83847 1481.83641 1.39 0.00069 0/0 0 0 64775024 HCD 30 MS2 60.72887 1071.1 33.678 64.3908 18968 18968 18965 QEplus033719.raw F4 1101.1 1010.9 1124.2 1025.1 1024.4 1141.2 414 3.76 2 FALSE 1.14E-05 3.17E-05 0.952 -250 89503 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRGTVLLSGPRK [K].gRGTVLLSGPRk.[G] N-Term(TMT6plex); K12(TMT6plex) 6 P35980 60S ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=3 A0A1B0GSS8; Q642K1; A0A1B0GQU8; Q0QEW9; A0A1B0GSF7; P35980 60S ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=1; Ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=2 SV=1; 60S ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=1; Ribosomal protein L18 (Fragment) OS=Mus musculus OX=10090 GN=Rpl18 PE=2 SV=1; 60S ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=1; 60S ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=3 2 4 4 0.5043 0 1 1 1 425.52451 1699.07619 1699.07429 1.12 0.00047 0/0 0 0 18544004 HCD 30 MS2 8.317239 637.8 95.136 64.3953 18970 18970 18965 QEplus033719.raw F4 700.5 516.6 760.4 400.4 732 716.8 197 3.51 1 FALSE 1.14E-05 0.0001293 0.836 -250 89507 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPSGPQGPSGPPGPK [R].gPSGPQGPSGPPGPk.[G] N-Term(TMT6plex); K15(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 4 4 0.6389 0 1 1 1 444.50229 1774.98733 1774.9852 1.2 0.00053 0/0 0 0 10519926 HCD 30 MS2 50.62732 661.1 53.592 64.3976 18971 18971 18965 QEplus033719.raw F4 692.2 495.9 751.1 518.8 753.5 754.9 436 3.24 1 FALSE 1.14E-05 9.16E-07 1.245 -250 89514 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLQHMK [K].vLQHMk.[A] N-Term(TMT6plex); K6(TMT6plex) 1 Q922Q8 Leucine-rich repeat-containing protein 59 OS=Mus musculus OX=10090 GN=Lrrc59 PE=1 SV=1 Q922Q8 Leucine-rich repeat-containing protein 59 OS=Mus musculus OX=10090 GN=Lrrc59 PE=1 SV=1 0 3 3 0.3844 0 1 1 1 405.25476 1213.74973 1213.74912 0.5 0.0002 0/0 0 0 16451365 HCD 30 MS2 22.60213 875.3 74.087 64.3998 18972 18972 18965 QEplus033719.raw F4 927.5 732.6 914.8 696.5 1087.4 893.3 250 3.2 1 FALSE 0.001404 0.02005 0.281 -250 89538 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CLSAAEEK [K].cLSAAEEk.[Y] N-Term(TMT6plex); C1(Carbamidomethyl); K8(TMT6plex) 6 Q8C7C3; Q58E70; E9Q5J9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1 Q8C7C3; Q3TJ53; Q58E70; D3Z2H9; E9Q5J9; Q8K0Z5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin 3, related sequence 7 OS=Mus musculus OX=10090 GN=Tpm3-rs7 PE=3 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 3, gamma OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1" 0 2 2 0.2428 0 1 1 1 683.3764 1365.74553 1365.74482 0.52 0.00035 0/0 0 0 11428209 HCD 30 MS2 0 1223.6 110 64.4074 18975 18975 18965 QEplus033719.raw F4 1294.2 1388.6 1295.6 766.3 1653.6 943.2 395 3.13 3 FALSE 1.14E-05 0.0002344 0.786 -250 89552 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNTQVLINCR [K].nNTQVLINcR.[N] N-Term(TMT6plex); C9(Carbamidomethyl) 1 P62317 Small nuclear ribonucleoprotein Sm D2 OS=Mus musculus OX=10090 GN=Snrpd2 PE=1 SV=1 P62317 Small nuclear ribonucleoprotein Sm D2 OS=Mus musculus OX=10090 GN=Snrpd2 PE=1 SV=1 0 2 2 0.5812 0 1 1 1 730.89709 1460.78691 1460.78411 1.92 0.0014 0/0 0 0 15249875 HCD 30 MS2 5.175551 756.2 110 64.4172 18978 18978 18976 QEplus033719.raw F4 774.9 686.2 820 581.7 849.7 824.7 330 3.08 1 FALSE 1.14E-05 0.0001164 0.844 -250 89563 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELRENTQTTIK [K].eLRENTQTTIk.[L] N-Term(TMT6plex); K11(TMT6plex) 17 Q5FWJ5 Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 P61979-3; Q3U9Q3; H3BJS9; A0A286YCM2; Q3TUA1; Q5FWJ5; H3BKD0; H3BK96; P61979; H3BLL4; A0A286YDM3; B2M1R6; Q3TG17; Q3U6X2; Q3TL71; Q3TJ38; H3BKI8 Isoform 3 of Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1 1 3 3 0.5868 0 1 1 1 597.68463 1791.03934 1791.03763 0.95 0.00057 0/0 0 0 123724656 HCD 30 MS2 6.903736 673.4 11.959 64.4217 18980 18980 18976 QEplus033719.raw F4 700.7 741.7 772.9 396.6 842.9 585.5 436 4.09 1 FALSE 1.14E-05 1.06E-07 1.422 -250 89568 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQEVIADK [K].qQEVIADk.[Q] N-Term(TMT6plex); K8(TMT6plex) 2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q80U36; Q9JHU4 MKIAA0325 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 2 2 0.4597 0 1 1 1 694.91205 1388.81682 1388.81495 1.35 0.00093 0/0 0 0 36933048 HCD 30 MS2 8.980186 901.6 57.809 64.424 18981 18981 18976 QEplus033719.raw F4 952.2 753.8 992.2 772.9 957.3 981 532 3.35 1 FALSE 1.14E-05 0.0001586 0.819 -250 89575 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQLTEEAK [K].eQLTEEAk.[E] N-Term(TMT6plex); K8(TMT6plex) 2 Q99KV1 DnaJ homolog subfamily B member 11 OS=Mus musculus OX=10090 GN=Dnajb11 PE=1 SV=1 Q99KV1; A0A338P778 DnaJ homolog subfamily B member 11 OS=Mus musculus OX=10090 GN=Dnajb11 PE=1 SV=1; DnaJ homolog subfamily B member 11 (Fragment) OS=Mus musculus OX=10090 GN=Dnajb11 PE=1 SV=1 0 2 2 0.5801 0 1 1 1 703.40137 1405.79546 1405.79388 1.12 0.00079 0/0 0 0 28771174 HCD 30 MS2 6.227623 1097.9 110 64.4265 18982 18982 18976 QEplus033719.raw F4 1096.7 877.7 1207.2 1094 1031.3 1280.7 400 3.31 1 FALSE 1.14E-05 0.0003256 0.759 -250 89581 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTVDDGLDIR [K].hTVDDGLDIR.[K] N-Term(TMT6plex) 1 Q6ZQ38 Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2 Q6ZQ38 Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2 0 3 3 0.67 0 1 1 1 457.24759 1369.72821 1369.72731 0.66 0.0003 0/0 0 0 22581136 HCD 30 MS2 42.00827 725.7 51.609 64.4288 18983 18983 18976 QEplus033719.raw F4 782.1 647.2 834.4 531.5 772.7 786.3 230 4 1 FALSE 1.14E-05 1.28E-07 1.407 -250 89604 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAPAPPKAEAK [K-].eAPAPPkAEAk.[A] N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex) 3 Q4V9X9 Rpl23a protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl23a PE=2 SV=1 Q4V9X9; Q91YK6; P62751 Rpl23a protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl23a PE=2 SV=1; Rpl23a protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl23a PE=2 SV=1; 60S ribosomal protein L23a OS=Mus musculus OX=10090 GN=Rpl23a PE=1 SV=1 1 4 4 0.4096 0 1 1 1 449.77942 1796.09585 1796.0885 4.09 0.00184 0/0 0 0 11579000 HCD 30 MS2 58.47714 739.3 61.605 64.4355 18986 18986 18976 QEplus033719.raw F4 821.1 548.4 758 835.1 567.3 905.7 265 2.71 1 FALSE 0.003058 0.05954 0.115 -250 89614 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NWGEEK [K].nWGEEk.[V] N-Term(TMT6plex); K6(TMT6plex) 1 Q8K2Y7 "39S ribosomal protein L47, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl47 PE=1 SV=2" Q8K2Y7 "39S ribosomal protein L47, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl47 PE=1 SV=2" 0 2 2 0.3884 0 1 1 1 610.83807 1220.66887 1220.66756 1.08 0.00066 0/0 0 0 8071064 HCD 30 MS2 68.17749 1118.3 110 64.4453 18989 18989 18987 QEplus033719.raw F4 1091.9 952.8 1205 1006 1165.8 1288.1 303 2.24 1 FALSE 0.001938 0.03323 0.201 -250 89621 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALTQTGGPHVK [R].aLTQTGGPHVk.[A] N-Term(TMT6plex); K11(TMT6plex) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.7408 0 1 1 1 522.98444 1566.93875 1566.9368 1.25 0.00065 0/0 0 0 109800704 HCD 30 MS2 11.61063 856.9 17.325 64.4476 18990 18990 18987 QEplus033719.raw F4 917.1 821.7 850.5 570.5 1288.2 693.7 368 5.44 1 FALSE 1.14E-05 2.22E-11 2.121 -250 89629 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RIHGVGFK [K].rIHGVGFk.[K] N-Term(TMT6plex); K8(TMT6plex) 4 P62900 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1 P62900; Q9CY93; A0A0A6YXL3; A0A0A6YX26 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=2 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1 1 3 3 0.5027 0 1 1 1 457.95926 1371.86322 1371.86251 0.52 0.00024 0/0 0 0 22989334 HCD 30 MS2 43.42736 802.8 39.967 64.4499 18991 18991 18987 QEplus033719.raw F4 915.4 591 1025.9 636.6 610 1038.1 270 3.74 1 FALSE 1.14E-05 0.0003243 0.759 -250 89644 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCAAEPEVEPEAHEGDGDK [K].scAAEPEVEPEAHEGDGDk.[K] N-Term(TMT6plex); C2(Carbamidomethyl); K19(TMT6plex) 2 P51859 Hepatoma-derived growth factor OS=Mus musculus OX=10090 GN=Hdgf PE=1 SV=2 P51859; E0CXA0 Hepatoma-derived growth factor OS=Mus musculus OX=10090 GN=Hdgf PE=1 SV=2; Hepatoma-derived growth factor (Fragment) OS=Mus musculus OX=10090 GN=Hdgf PE=1 SV=1 0 3 3 0.864 0 1 1 1 829.05792 2485.15921 2485.15532 1.57 0.0013 0/0 0 0 11043845 HCD 30 MS2 9.188731 343.6 110 64.4546 18993 18993 18987 QEplus033719.raw F4 372.6 264.2 370.1 264 428.1 362.3 74 6.84 1 FALSE 1.14E-05 6.31E-16 3.667 -250 89649 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMLPHK [R].gMLPHk.[T] N-Term(TMT6plex); K6(TMT6plex) 7 A0A1B0GS68 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Gm45713 PE=2 SV=1 A0A1B0GS68; A0A1B0GTA1; Q3TDS9; A0A1B0GSC2; P19253; A0A1B0GT00; A0A1B0GSB2 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Gm45713 PE=2 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=2 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=4; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1 0 3 3 0.4019 0 1 1 1 380.9039 1140.69715 1140.69636 0.69 0.00026 0/0 0 0 11571824 HCD 30 MS2 19.98837 714.4 110 64.4571 18994 18994 18987 QEplus033719.raw F4 662.6 617.9 820.3 545.1 735 905.4 159 3.21 1 FALSE 0.0009075 0.0125 0.366 -250 89666 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELRENTQTTIK [K].eLRENTQTTIk.[L] N-Term(TMT6plex); K11(TMT6plex) 17 Q5FWJ5 Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 P61979-3; Q3U9Q3; H3BJS9; A0A286YCM2; Q3TUA1; Q5FWJ5; H3BKD0; H3BK96; P61979; H3BLL4; A0A286YDM3; B2M1R6; Q3TG17; Q3U6X2; Q3TL71; Q3TJ38; H3BKI8 Isoform 3 of Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1 1 2 2 0.4115 0 1 1 1 896.0246 1791.04192 1791.03763 2.39 0.00214 0/0 0 0 4770238.5 HCD 30 MS2 0 369.7 110 64.4622 18996 18996 18987 QEplus033719.raw F4 364.7 383.6 409.8 242 484.8 333.3 461 2.6 1 FALSE 5.44E-05 0.001852 0.606 -250 89670 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGLGQGVQGDAGPR [R].gGGLGQGVQGDAGPR.[R] N-Term(TMT6plex) 1 Q3U046 WW domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Yap1 PE=2 SV=1 Q3U046 WW domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Yap1 PE=2 SV=1 0 2 2 0.375 0 1 1 1 777.91248 1554.81767 1554.81858 -0.58 -0.00045 0/0 0 0 4246519.5 HCD 30 MS2 24.58311 267.3 110 64.4647 18997 18997 18987 QEplus033719.raw F4 269.6 240.4 302 212.4 303.6 275.9 255 2.88 1 FALSE 1.14E-05 0.0003011 0.765 -250 89673 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALTQTGGPHVK [R].aLTQTGGPHVk.[A] N-Term(TMT6plex); K11(TMT6plex) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.6528 0 1 1 1 783.97308 1566.93889 1566.9368 1.34 0.00105 0/0 0 0 4340158.5 HCD 30 MS2 0 311.6 110 64.472 18999 18999 18998 QEplus033719.raw F4 325.1 330.2 329.9 203.7 447 233.6 368 3.86 1 FALSE 1.14E-05 1.86E-09 1.756 -250 89679 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQYESVAAK [R].qQYESVAAk.[N] N-Term(TMT6plex); K9(TMT6plex) 8 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.7098 0 1 1 1 741.42279 1481.8383 1481.83641 1.28 0.00095 0/0 0 0 317865376 HCD 30 MS2 3.923308 801.8 7.563 64.4743 19000 19000 18998 QEplus033719.raw F4 815.5 927.6 888.9 514.6 1032 632.2 415 4.17 2 FALSE 1.14E-05 4.15E-06 1.12 -250 89686 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELRENTQTTIK [K].eLRENTQTTIk.[L] N-Term(TMT6plex); K11(TMT6plex) 17 Q5FWJ5 Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 P61979-3; Q3U9Q3; H3BJS9; A0A286YCM2; Q3TUA1; Q5FWJ5; H3BKD0; H3BK96; P61979; H3BLL4; A0A286YDM3; B2M1R6; Q3TG17; Q3U6X2; Q3TL71; Q3TJ38; H3BKI8 Isoform 3 of Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1 1 4 4 0.4505 0 1 1 1 448.51547 1791.04006 1791.03763 1.35 0.00061 0/0 0 0 23214232 HCD 30 MS2 28.31291 832.7 73.799 64.4766 19001 19001 18998 QEplus033719.raw F4 947.7 657.7 814.9 793.3 883.1 899.7 455 4.04 1 FALSE 1.14E-05 0.0003031 0.765 -250 89692 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYLEDPEDERRK [R].nYLEDPEDERRk.[-] N-Term(TMT6plex); K12(TMT6plex) 1 F6RQN3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (Fragment) OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 F6RQN3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (Fragment) OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 2 4 4 0.729 0 1 1 1 506.27209 2022.06655 2022.06564 0.45 0.00023 0/0 0 0 23148112 HCD 30 MS2 26.65559 661.8 58.25 64.4788 19002 19002 18998 QEplus033719.raw F4 748.9 297.4 573.2 976.7 438.6 935.8 346 4.28 1 FALSE 1.14E-05 6.94E-08 1.457 -250 89698 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVLEQSK [R].sVLEQSk.[L] N-Term(TMT6plex); K7(TMT6plex) 4 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 0 2 2 0.4069 0 1 1 1 624.88269 1248.7581 1248.75637 1.39 0.00087 0/0 0 0 22173388 HCD 30 MS2 29.65521 1058.9 50.509 64.4811 19003 19003 18998 QEplus033719.raw F4 1197.9 764.1 956.6 1259 1059.4 1116.2 430 2.9 1 FALSE 0.0002419 0.004879 0.504 -250 89715 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPSGPQGPSGPPGPK [R].gPSGPQGPSGPPGPk.[G] N-Term(TMT6plex); K15(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 2 2 0.8436 0 1 1 1 887.99792 1774.98857 1774.9852 1.9 0.00168 0/0 0 0 13076604 HCD 30 MS2 0 507.2 110 64.4881 19006 19006 18998 QEplus033719.raw F4 471.4 512.2 692.5 251.9 564.9 550.2 424 5.18 1 FALSE 1.14E-05 3.88E-14 2.645 -250 89721 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRQEYDALAK [K].nRQEYDALAk.[V] N-Term(TMT6plex); K10(TMT6plex) 5 Q7TMY4 THO complex subunit 7 homolog OS=Mus musculus OX=10090 GN=Thoc7 PE=1 SV=2 Q7TMY4; A0A286YEA7; A0A286YCS0; A0A286YDT0; Q7TMY4-2 THO complex subunit 7 homolog OS=Mus musculus OX=10090 GN=Thoc7 PE=1 SV=2; THO complex subunit 7 homolog (Fragment) OS=Mus musculus OX=10090 GN=Thoc7 PE=1 SV=1; THO complex subunit 7 homolog OS=Mus musculus OX=10090 GN=Thoc7 PE=1 SV=1; THO complex subunit 7 homolog (Fragment) OS=Mus musculus OX=10090 GN=Thoc7 PE=1 SV=1; Isoform 2 of THO complex subunit 7 homolog OS=Mus musculus OX=10090 GN=Thoc7 1 3 3 0.3569 0 1 1 1 555.98303 1665.93454 1665.93244 1.26 0.0007 0/0 0 0 8049946.5 HCD 30 MS2 45.69044 1366.6 110 64.4906 19007 19007 18998 QEplus033719.raw F4 1573.4 961.6 1485.9 1121 1446.7 1611 444 2.97 1 FALSE 1.14E-05 0.0007572 0.687 -250 89726 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EENGTWEK [K].eENGTWEk.[T] N-Term(TMT6plex); K8(TMT6plex) 1 Q9D1M0 Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3 Q9D1M0 Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3 0 2 2 0.5284 0 1 1 1 725.8833 1450.75932 1450.75783 1.03 0.00075 0/0 0 0 6660867.5 HCD 30 MS2 29.09997 684.6 110 64.4932 19008 19008 18998 QEplus033719.raw F4 672 566.5 769.5 615.9 708.5 774.9 259 2.82 1 FALSE 1.14E-05 0.0001831 0.807 -250 89731 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCLVGK [R].ncLVGk.[N] N-Term(TMT6plex); C2(Carbamidomethyl); K6(TMT6plex) 1 Q62371 Discoidin domain-containing receptor 2 OS=Mus musculus OX=10090 GN=Ddr2 PE=1 SV=2 Q62371 Discoidin domain-containing receptor 2 OS=Mus musculus OX=10090 GN=Ddr2 PE=1 SV=2 0 2 2 0.3541 0 1 1 1 574.84656 1148.68584 1148.68619 -0.3 -0.00017 0/0 0 0 5496406 HCD 30 MS2 38.56369 1003.8 110 64.5005 19010 19010 19009 QEplus033719.raw F4 1062.8 805.4 1033.4 855 1231.3 1035 331 2.09 1 FALSE 0.002439 0.04856 0.146 -250 89737 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RIHGVGFK [K].rIHGVGFk.[K] N-Term(TMT6plex); K8(TMT6plex) 4 P62900 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1 P62900; Q9CY93; A0A0A6YXL3; A0A0A6YX26 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=2 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1 1 2 2 0.3597 0 1 1 1 686.43512 1371.86296 1371.86251 0.33 0.00023 0/0 0 0 2637007.25 HCD 30 MS2 0 366.6 110 64.503 19011 19011 19009 QEplus033719.raw F4 368.7 286.6 478.7 288.8 309.1 467.8 269 2.53 1 FALSE 0.00562 0.09448 0.022 -250 89743 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPSGPQGPSGPPGPK [R].gPSGPQGPSGPPGPk.[G] N-Term(TMT6plex); K15(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 3 3 0.7842 0 1 1 1 592.33398 1774.9874 1774.9852 1.24 0.00073 0/0 0 0 77194792 HCD 30 MS2 10.11102 380.7 22.908 64.5053 19012 19012 19009 QEplus033719.raw F4 342.6 399.4 483.3 213.4 447 398.5 435 5.33 1 FALSE 1.14E-05 4.97E-13 2.435 -250 89751 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAITPGGLR [R].sAITPGGLR.[L] N-Term(TMT6plex) 2 Q9CZN7 "Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" Q9CZN7-2; Q9CZN7 "Isoform 2 of Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2; Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" 0 2 2 0.5663 0 1 1 1 550.83557 1100.66387 1100.66252 1.22 0.00067 0/0 0 0 24089926 HCD 30 MS2 36.15454 1159.2 54.819 64.5075 19013 19013 19009 QEplus033719.raw F4 1301.2 807.2 1196.6 1141.5 1144.3 1364.2 272 2.49 1 FALSE 1.14E-05 0.0005636 0.712 -250 89757 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VKADQDSEAMK [K].vkADQDSEAMk.[R] N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex) 15 A0A1L1SQ51; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1;Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q71LX4; A0A1L1SRI1; Q80TM2; A0A1L1SQ51; B2RY15; Q9CS79; Q6PB69; Q8CHG4; Q8CDM9; A0A1L1SQP9; Q0V930; Q3UHS6; Q3TBC3; E9PUM4; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=3; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Tln2 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; MKIAA0320 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 1 3 3 0.7324 0 1 1 1 637.02753 1909.06803 1909.06677 0.66 0.00042 0/0 0 0 22883242 HCD 30 MS2 10.50044 1478.4 110 64.51 19014 19014 19009 QEplus033719.raw F4 1537.8 1510.5 1563.6 1159.3 1786 1313.2 404 4.82 2 FALSE 1.14E-05 5.11E-11 2.052 -250 89763 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPQYGTVEK [K].gPQYGTVEk.[A] N-Term(TMT6plex); K9(TMT6plex) 3 Q9WVE8 Protein kinase C and casein kinase substrate in neurons protein 2 OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1 Q3UP40; Q9WVE8; A0A2R8W750 Protein kinase C and casein kinase substrate in neurons protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1; Protein kinase C and casein kinase substrate in neurons protein 2 OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1; Protein kinase C and casein kinase substrate in neurons protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1 0 2 2 0.5934 0 1 1 1 718.91113 1436.81499 1436.81495 0.03 0.00002 0/0 0 0 17084704 HCD 30 MS2 6.793871 903.8 110 64.5125 19015 19015 19009 QEplus033719.raw F4 975.9 800.8 1037.4 758.4 898 952.5 435 3.32 1 FALSE 1.14E-05 3.34E-06 1.138 -250 89770 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDNDENEHQLSLR [K].vDNDENEHQLSLR.[T] N-Term(TMT6plex) 9 Q5SQB7 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1 Q5SQB7; Q5SQB0; Q8BSZ3; Q5BL09; Q5U438; Q9DAY9; Q3UDA7; Q5SQB5; Q3U536 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Npm1 protein OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1 0 3 3 0.7801 0 1 1 1 599.9696 1797.89426 1797.89287 0.77 0.00046 0/0 0 0 14373601 HCD 30 MS2 69.112 992 48.812 64.5148 19016 19016 19009 QEplus033719.raw F4 879.5 1131.2 1148.7 819.8 996.9 975.8 180 4.23 1 FALSE 1.14E-05 1.76E-09 1.76 -250 89775 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAEDQEAQLK [K].dAEDQEAQLk.[N] N-Term(TMT6plex); K10(TMT6plex) 1 O35685 Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1 O35685 Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1 0 2 2 0.6789 0 1 1 1 802.93237 1604.85747 1604.85319 2.67 0.00214 0/0 0 0 8282695 HCD 30 MS2 12.8948 634.2 110 64.5173 19017 19017 19009 QEplus033719.raw F4 696.4 603.4 648.5 447.9 805.7 603.1 339 4.36 1 FALSE 1.14E-05 3.61E-08 1.511 -250 89795 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHPPELKK [K].aHPPELkk.[F] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 1 P62309 Small nuclear ribonucleoprotein G OS=Mus musculus OX=10090 GN=Snrpg PE=1 SV=1 P62309 Small nuclear ribonucleoprotein G OS=Mus musculus OX=10090 GN=Snrpg PE=1 SV=1 1 4 4 0.5536 0 1 1 1 402.51215 1607.02675 1607.02477 1.23 0.0005 0/0 0 0 17825250 HCD 30 MS2 39.19659 830.4 64.241 64.5316 19022 19022 19020 QEplus033719.raw F4 1185.9 670.7 801.2 665.7 886.1 772.8 174 2.8 1 FALSE 0.0001401 0.00325 0.55 -250 89814 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAEDEAFQRR [R].lAEDEAFQRR.[R] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.5564 0 1 1 1 488.5993 1463.78336 1463.78041 2.02 0.00098 0/0 0 0 22670800 HCD 30 MS2 28.53002 1135.8 79.824 64.5384 19025 19025 19020 QEplus033719.raw F4 1558.8 854.4 1128.2 998 1203.5 1071.9 335 4.08 2 FALSE 1.14E-05 3.86E-06 1.126 -250 89823 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAASTDYYK [R].aAASTDYYk.[R] N-Term(TMT6plex); K9(TMT6plex) 1 Q3UFJ3 Pyruvate dehydrogenase E1 component subunit alpha OS=Mus musculus OX=10090 GN=Pdha1 PE=1 SV=1 Q3UFJ3 Pyruvate dehydrogenase E1 component subunit alpha OS=Mus musculus OX=10090 GN=Pdha1 PE=1 SV=1 0 2 2 0.6992 0 1 1 1 724.39587 1447.78447 1447.78332 0.8 0.00058 0/0 0 0 16068844 HCD 30 MS2 0 942.7 110 64.5409 19026 19026 19020 QEplus033719.raw F4 821.7 689.8 1087 1254.3 596.5 1206.8 368 3.99 1 FALSE 1.14E-05 1.04E-06 1.234 -250 89828 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAEFQVAR [K].tAEFQVAR.[T] N-Term(TMT6plex) 6 Q3TG12 Phenylalanyl-tRNA synthetase beta subunit (Fragment) OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1 Q9CZU5; Q3TI98; Q3TMX6; Q8C644; Q3TG12; Q9WUA2 Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit (Fragment) OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanine--tRNA ligase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=1 SV=2 0 2 2 0.6161 0 1 1 1 575.82556 1150.64385 1150.64179 1.79 0.00103 0/0 0 0 11933007 HCD 30 MS2 8.14274 1004.7 110 64.5435 19027 19027 19020 QEplus033719.raw F4 1060 847 1106.5 844.8 1063.9 1105.8 332 3.1 1 FALSE 1.14E-05 0.000158 0.819 -250 89844 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVTVDLGHR [R].aVTVDLGHR.[K] N-Term(TMT6plex) 5 Q3UNL5 Polynucleotide phosphorylase 1 OS=Mus musculus OX=10090 GN=Pnpt1 PE=2 SV=1 Q3UNL5; Q8K1R3-2; Q3TST0; Q8K1R3; Q3TN29 "Polynucleotide phosphorylase 1 OS=Mus musculus OX=10090 GN=Pnpt1 PE=2 SV=1; Isoform 2 of Polyribonucleotide nucleotidyltransferase 1, mitochondrial OS=Mus musculus OX=10090 GN=Pnpt1; Polynucleotide phosphorylase 1 OS=Mus musculus OX=10090 GN=Pnpt1 PE=2 SV=1; Polyribonucleotide nucleotidyltransferase 1, mitochondrial OS=Mus musculus OX=10090 GN=Pnpt1 PE=1 SV=1; Polynucleotide phosphorylase 1 OS=Mus musculus OX=10090 GN=Pnpt1 PE=2 SV=1" 0 3 3 0.5244 0 1 1 1 399.56958 1196.69419 1196.69489 -0.58 -0.00023 0/0 0 0 4484291 HCD 30 MS2 71.59157 630 110 64.5484 19029 19029 19020 QEplus033719.raw F4 647.9 498.4 671.2 471.7 772.8 718.1 229 3.28 1 FALSE 1.14E-05 1.32E-06 1.214 -250 89859 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESLLAEQR [R].eSLLAEQR.[G] N-Term(TMT6plex) 4 Q7M739 Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1 Q7M739; F6ZDS4; Q3V1L5; Q3TZB5 Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR OS=Mus musculus OX=10090 GN=Tpr PE=1 SV=1; Nucleoprotein TPR (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tpr PE=2 SV=1 0 2 2 0.3764 0 1 1 1 587.83667 1174.66606 1174.66292 2.68 0.00157 0/0 0 0 17563080 HCD 30 MS2 20.92054 984.3 110 64.5583 19032 19032 19031 QEplus033719.raw F4 1074.5 911.9 1043.2 712.1 1194.7 969.6 301 2.63 1 FALSE 1.14E-05 0.0001047 0.853 -250 89866 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQAQADLAQEK [R].gQAQADLAQEk.[A] N-Term(TMT6plex); K11(TMT6plex) 2 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 E9Q7G0; A0A1B0GSW3 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1; Nuclear mitotic apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 0 2 2 0.7521 0 1 1 1 808.95593 1616.90459 1616.90081 2.34 0.00189 0/0 0 0 3298195.5 HCD 30 MS2 73.76482 319.2 110 64.5608 19033 19033 19031 QEplus033719.raw F4 309.3 325.2 348.7 237.6 385.1 309 424 3.55 1 FALSE 1.14E-05 2.14E-10 1.934 -250 89873 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQDIYLR [K].sQDIYLR.[L] N-Term(TMT6plex) 4 P35980 60S ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=3 A0A1B0GSA8; A0A1B0GSS8; Q642K1; P35980 60S ribosomal protein L18 (Fragment) OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=1; 60S ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=1; Ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=2 SV=1; 60S ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=3 0 2 2 0.3832 0 1 1 1 562.31958 1123.63188 1123.63089 0.88 0.0005 0/0 0 0 210646656 HCD 30 MS2 12.70887 593.7 7.215 64.5631 19034 19034 19031 QEplus033719.raw F4 597.7 458.6 648.7 623 593.9 640.5 196 2.74 1 FALSE 0.0006294 0.00947 0.413 -250 89883 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDQTEYLEER [K].eDQTEYLEER.[R-] N-Term(TMT6plex) 11 P07901; Q71LX8 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4;Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q3TKB9; P07901; Q3TJU7; B7ZC50; Q3TKA2; Q3UIF3; A0PJ91; Q8C2A9; Q71LX8; Q3TKG0; Q8C5U3 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 0 3 3 0.5801 0 1 1 1 514.24988 1540.73508 1540.73285 1.45 0.00074 0/0 0 0 30678130 HCD 30 MS2 52.66766 879.2 50.305 64.5653 19035 19035 19031 QEplus033719.raw F4 914.2 621.9 897.1 883.4 879.2 1079.2 77 3.81 2 FALSE 0.0001603 0.003532 0.541 -250 89890 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCVLLSR [K].ncVLLSR.[S] N-Term(TMT6plex); C2(Carbamidomethyl) 3 Q6NXL1 "Sec24-related gene family, member D (S. cerevisiae) OS=Mus musculus OX=10090 GN=Sec24d PE=1 SV=1" Q80V21; Q6NXL1; Q8R0M3 "Sec24d protein OS=Mus musculus OX=10090 GN=Sec24d PE=2 SV=1; Sec24-related gene family, member D (S. cerevisiae) OS=Mus musculus OX=10090 GN=Sec24d PE=1 SV=1; Sec24d protein (Fragment) OS=Mus musculus OX=10090 GN=Sec24d PE=2 SV=1" 0 2 2 0.2523 0 1 1 1 545.8161 1090.62493 1090.62403 0.82 0.00045 0/0 0 0 16095326 HCD 30 MS2 24.92796 1398 110 64.5678 19036 19036 19031 QEplus033719.raw F4 1611.7 1100.2 1388.1 1144.3 1763.5 1380 244 2.22 1 FALSE 0.0005556 0.008343 0.433 -250 89908 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVPDSCCK [R].vVPDScck.[T] N-Term(TMT6plex); C6(Carbamidomethyl); C7(Carbamidomethyl); K8(TMT6plex) 3 O35566 CD151 antigen OS=Mus musculus OX=10090 GN=Cd151 PE=1 SV=2 O35566; A0A1B0GSK8; Q921J7 CD151 antigen OS=Mus musculus OX=10090 GN=Cd151 PE=1 SV=2; Tetraspanin (Fragment) OS=Mus musculus OX=10090 GN=Cd151 PE=1 SV=1; Tetraspanin OS=Mus musculus OX=10090 GN=Cd151 PE=2 SV=1 0 2 2 0.5792 0 1 1 1 711.87878 1422.75029 1422.74853 1.24 0.00088 0/0 0 0 12845720 HCD 30 MS2 7.791811 811.2 110 64.5726 19038 19038 19031 QEplus033719.raw F4 793.6 750 823.9 616.5 1048.3 835.1 287 2.4 1 FALSE 0.001938 0.03327 0.201 -250 89956 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVWVAR [R].sVWVAR.[N] N-Term(TMT6plex) 3 P84104 Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3 PE=1 SV=1 P84104-2; P84104; Q9D6W4 Isoform Short of Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3; Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3 PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf3 PE=2 SV=1 0 2 2 0.1594 0 1 1 1 473.78784 946.56841 946.56717 1.31 0.00062 0/0 0 0 109460480 HCD 30 MS2 28.13066 699.8 10.241 64.5923 19045 19045 19042 QEplus033719.raw F4 738.4 631.6 793.5 556.9 815.2 663.4 208 2.07 1 FALSE 0.00557 0.09404 0.023 -250 89973 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELNDLAR [K].eLNDLAR.[D] N-Term(TMT6plex) 2 P62838 Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus OX=10090 GN=Ube2d2 PE=1 SV=1 A0A494BBD7; P62838 Ubiquitin-conjugating enzyme E2D 2A (Fragment) OS=Mus musculus OX=10090 GN=Ube2d2a PE=1 SV=1; Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus OX=10090 GN=Ube2d2 PE=1 SV=1 0 2 2 0.1889 0 1 1 1 530.30255 1059.59783 1059.59959 -1.66 -0.00088 0/0 0 0 13609632 HCD 30 MS2 49.97953 1352 77.046 64.5968 19047 19047 19042 QEplus033719.raw F4 1424.3 1112.3 1448.4 1091.2 1677.1 1358.9 247 1.8 1 FALSE 0.002123 0.03969 0.176 -250 89982 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WHNINCK [K].wHNINck.[E] N-Term(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex) 2 A0A1Z3MI45 Ifi204 OS=Mus musculus domesticus OX=10092 GN=Ifi204 PE=3 SV=1 A0A1Z3MI45; P0DOV2 Ifi204 OS=Mus musculus domesticus OX=10092 GN=Ifi204 PE=3 SV=1; Interferon-activable protein 204 OS=Mus musculus OX=10090 GN=Ifi204 PE=1 SV=1 0 3 3 0.4871 0 1 1 1 477.26385 1429.77701 1429.77746 -0.31 -0.00015 0/0 0 0 12727925 HCD 30 MS2 47.99491 1191.5 110 64.5993 19048 19048 19042 QEplus033719.raw F4 1406.3 904.8 1240.1 901.9 1349.8 1346.1 310 2.71 1 FALSE 0.001301 0.01774 0.302 -250 89987 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLFNVDR [K].rLFNVDR.[H] N-Term(TMT6plex) 2 Q9DCD8 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1 Q9DCD8; O70435 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1; Proteasome subunit alpha type-3 OS=Mus musculus OX=10090 GN=Psma3 PE=1 SV=3 1 3 3 0.4508 0 1 1 1 383.56311 1148.67478 1148.67376 0.89 0.00034 0/0 0 0 9992547 HCD 30 MS2 30.53155 536.2 110 64.6017 19049 19049 19042 QEplus033719.raw F4 579.2 428 556.4 437.4 562.5 653.5 314 3.15 1 FALSE 0.00192 0.03277 0.203 -250 90014 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAWEVDSGR [R].aAWEVDSGR.[R] N-Term(TMT6plex) 3 P45952 "Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadm PE=1 SV=1" P45952; Q91WS8; Q8BJT5 "Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadm PE=1 SV=1; Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadm PE=2 SV=1; Acyl-CoA_dh_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Acadm PE=2 SV=1" 0 2 2 0.6408 0 1 1 1 610.3194 1219.63152 1219.62687 3.81 0.00233 0/0 0 0 3897690.5 HCD 30 MS2 0 818.5 110 64.6092 19052 19052 19042 QEplus033719.raw F4 799.3 644.8 823.3 764.8 838.6 1040 211 2.06 1 FALSE 5.44E-05 0.002557 0.574 -250 90023 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDNDENEHQLSLR [K].vDNDENEHQLSLR.[T] N-Term(TMT6plex) 9 Q5SQB7 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1 Q5SQB7; Q5SQB0; Q8BSZ3; Q5BL09; Q5U438; Q9DAY9; Q3UDA7; Q5SQB5; Q3U536 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Npm1 protein OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1 0 2 2 0.6958 0 1 1 1 899.45044 1797.8936 1797.89287 0.41 0.00037 0/0 0 0 4094101.5 HCD 30 MS2 0 209.4 110 64.6166 19054 19054 19053 QEplus033719.raw F4 222 217.3 219.5 149.5 250.2 198.1 176 4.8 1 FALSE 1.14E-05 2.73E-12 2.294 -250 90036 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQGLNSK [K].vQGLNSk.[V] N-Term(TMT6plex); K7(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.3585 0 1 1 1 602.37726 1203.74724 1203.74614 0.91 0.00055 0/0 0 0 100923520 HCD 30 MS2 14.5594 946.6 12.865 64.6214 19056 19056 19053 QEplus033719.raw F4 1041.9 547.9 1023 1137.1 734.5 1195 389 2.65 1 FALSE 0.0008183 0.01116 0.386 -250 90046 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQLEEAEEEAQR [K].rQLEEAEEEAQR.[A] N-Term(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q7TQJ6; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 3 3 0.8132 0 1 1 1 572.96222 1716.8721 1716.87141 0.41 0.00023 0/0 0 0 18638406 HCD 30 MS2 9.36351 592.4 110 64.6239 19057 19057 19053 QEplus033719.raw F4 570.5 537.4 598.5 435.2 786 626.8 201 6.96 1 FALSE 1.14E-05 2.57E-14 2.679 -250 90048 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAEDQEAQLK [K].dAEDQEAQLk.[N] N-Term(TMT6plex); K10(TMT6plex) 1 O35685 Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1 O35685 Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1 0 3 3 0.6828 0 1 1 1 535.62506 1604.86063 1604.85319 4.64 0.00248 0/0 0 0 18359604 HCD 30 MS2 65.69654 953.9 42.886 64.6261 19058 19058 19053 QEplus033719.raw F4 931.2 737.5 1022 968.2 977.1 1087.4 359 3.72 1 FALSE 1.14E-05 0.0001483 0.824 -250 90055 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DPNSGLPK [K].dPNSGLPk.[F] N-Term(TMT6plex); K8(TMT6plex) 3 Q62418 Drebrin-like protein OS=Mus musculus OX=10090 GN=Dbnl PE=1 SV=2 Q62418; Q62418-2; Q62418-3 Drebrin-like protein OS=Mus musculus OX=10090 GN=Dbnl PE=1 SV=2; Isoform 2 of Drebrin-like protein OS=Mus musculus OX=10090 GN=Dbnl; Isoform 3 of Drebrin-like protein OS=Mus musculus OX=10090 GN=Dbnl 0 2 2 0.4528 0 1 1 1 643.38116 1285.75505 1285.75162 2.67 0.00172 0/0 0 0 14923551 HCD 30 MS2 0 955.4 110 64.6312 19060 19060 19053 QEplus033719.raw F4 941.3 747.9 1073.5 766.5 1151.5 1051.6 372 2.12 1 FALSE 0.002836 0.05545 0.126 -250 90068 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVSVTEGK [R].tVSVTEGk.[D] N-Term(TMT6plex); K8(TMT6plex) 2 Q69ZJ6 MKIAA1436 protein (Fragment) OS=Mus musculus OX=10090 GN=Ptgfrn PE=2 SV=1 Q69ZJ6; Q9WV91 MKIAA1436 protein (Fragment) OS=Mus musculus OX=10090 GN=Ptgfrn PE=2 SV=1; Prostaglandin F2 receptor negative regulator OS=Mus musculus OX=10090 GN=Ptgfrn PE=1 SV=2 0 2 2 0.4735 0 1 1 1 639.88885 1278.77043 1278.76694 2.73 0.00175 0/0 0 0 7583724.5 HCD 30 MS2 34.5593 825.3 110 64.6385 19063 19063 19053 QEplus033719.raw F4 789 722.2 880.8 795.1 877.9 887 359 3.4 1 FALSE 1.14E-05 8.47E-05 0.871 -250 90078 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVIDYNGER [R].tVIDYNGER.[T] N-Term(TMT6plex) 14 P09103 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2 P09103; Q3URP6; Q3TWE3; Q3U738; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; E9Q8G8; Q3UA23; Q3TIQ5; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Thioredoxin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 0 2 2 0.5795 0 1 1 1 648.34174 1295.6762 1295.6793 -2.39 -0.00155 0/0 0 0 9623451 HCD 30 MS2 46.62701 1084.2 110 64.6483 19066 19066 19064 QEplus033719.raw F4 1173.5 586 1023.5 1273.5 798 1650.9 205 2.83 1 FALSE 3.35E-05 0.001269 0.641 -250 90110 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HMVGPDWR [R].hMVGPDWR.[Q] N-Term(TMT6plex) 4 A0A2I3BQR1 5'-nucleotidase domain-containing 2 (Fragment) OS=Mus musculus OX=10090 GN=Nt5dc2 PE=1 SV=1 A0A2I3BQR1; A0A2I3BR81; Q91X76; A0A2I3BRL0 5'-nucleotidase domain-containing 2 (Fragment) OS=Mus musculus OX=10090 GN=Nt5dc2 PE=1 SV=1; 5'-nucleotidase domain-containing 2 OS=Mus musculus OX=10090 GN=Nt5dc2 PE=1 SV=1; 5'-nucleotidase domain-containing 2 OS=Mus musculus OX=10090 GN=Nt5dc2 PE=1 SV=1; 5'-nucleotidase domain-containing 2 OS=Mus musculus OX=10090 GN=Nt5dc2 PE=1 SV=1 0 3 3 0.6304 0 1 1 1 409.54852 1226.63102 1226.63018 0.68 0.00028 0/0 0 0 14940227 HCD 30 MS2 35.08823 563.7 82.539 64.6573 19070 19070 19064 QEplus033719.raw F4 674.1 411.1 596 420.3 613.9 666.8 148 2.76 1 FALSE 1.14E-05 0.0007855 0.683 -250 90117 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAASTDYYK [R].aAASTDYYk.[R] N-Term(TMT6plex); K9(TMT6plex) 1 Q3UFJ3 Pyruvate dehydrogenase E1 component subunit alpha OS=Mus musculus OX=10090 GN=Pdha1 PE=1 SV=1 Q3UFJ3 Pyruvate dehydrogenase E1 component subunit alpha OS=Mus musculus OX=10090 GN=Pdha1 PE=1 SV=1 0 3 3 0.6537 0 1 1 1 483.26694 1447.78626 1447.78332 2.03 0.00098 0/0 0 0 14803500 HCD 30 MS2 18.00053 1097.1 110 64.6598 19071 19071 19064 QEplus033719.raw F4 1152.2 835.7 1197.3 1089.1 1036.9 1271.7 361 2.57 1 FALSE 0.0004888 0.007778 0.443 -250 90141 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEDTTMPIR [K].aEDTTMPIR.[R] N-Term(TMT6plex) 6 Q3TEA8 Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1 Q3TEA8; A2AM70; Z4YKB8; A2AM69; Q3TEA8-2; Q3B7C1 Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1; Heterochromatin protein 1-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1; Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1; Heterochromatin protein 1-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=8; Isoform 2 of Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3; Heterochromatin protein 1-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Hp1bp3 PE=2 SV=1 0 2 2 0.5 0 1 1 1 631.83917 1262.67107 1262.6612 7.81 0.00493 0/0 0 0 3474512.75 HCD 30 MS2 59.89629 848.6 110 64.6674 19074 19074 19064 QEplus033719.raw F4 821.1 777.6 844.5 784.4 984.3 879.7 245 2.58 1 FALSE 0.001567 0.02375 0.252 -250 90153 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQSELSGAADEAAR [K].aQSELSGAADEAAR.[A] N-Term(TMT6plex) 3 Q4FK74 ATP synthase F1 subunit delta OS=Mus musculus OX=10090 GN=Atp5d PE=1 SV=1 Q4FK74; Q9D0J2; Q9DCZ0 ATP synthase F1 subunit delta OS=Mus musculus OX=10090 GN=Atp5d PE=1 SV=1; ATP synthase F1 subunit delta OS=Mus musculus OX=10090 GN=Atp5d PE=2 SV=1; ATP synthase F1 subunit delta OS=Mus musculus OX=10090 GN=Atp5d PE=2 SV=1 0 2 2 0.7527 0 1 1 1 802.90558 1604.80388 1604.80774 -2.41 -0.00193 0/0 0 0 43451868 HCD 30 MS2 4.777696 440.7 31.83 64.677 19077 19077 19075 QEplus033719.raw F4 451.7 357.5 478.8 430.4 428.5 497.2 192 4.61 1 FALSE 1.14E-05 1.29E-14 2.736 -250 90159 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQSELSGAADEAAR [K].aQSELSGAADEAAR.[A] N-Term(TMT6plex) 3 Q4FK74 ATP synthase F1 subunit delta OS=Mus musculus OX=10090 GN=Atp5d PE=1 SV=1 Q4FK74; Q9D0J2; Q9DCZ0 ATP synthase F1 subunit delta OS=Mus musculus OX=10090 GN=Atp5d PE=1 SV=1; ATP synthase F1 subunit delta OS=Mus musculus OX=10090 GN=Atp5d PE=2 SV=1; ATP synthase F1 subunit delta OS=Mus musculus OX=10090 GN=Atp5d PE=2 SV=1 0 3 3 0.7734 0 1 1 1 535.60797 1604.80936 1604.80774 1.01 0.00054 0/0 0 0 36238560 HCD 30 MS2 51.55331 620.5 26.971 64.6792 19078 19078 19075 QEplus033719.raw F4 618.9 461.1 683.2 637 597.5 725 198 4.59 1 FALSE 1.14E-05 4.61E-08 1.491 -250 90163 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APQCLGK [R].aPQcLGk.[F] N-Term(TMT6plex); C4(Carbamidomethyl); K7(TMT6plex) 10 Q8C290 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1 Q8C290; Q8VEK3-2; Q3ULH5; Q3TVV6; Q3TXW2; Q3TGN5; O88568; Q3TWN5; Q3TS50; Q8VEK3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; B30.2/SPRY domain-containing protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Heterogenous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; B30.2/SPRY domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=1 SV=1 0 2 2 0.5766 0 1 1 1 616.36749 1231.72771 1231.7233 3.58 0.0022 0/0 0 0 35462436 HCD 30 MS2 29.84605 1083 37.487 64.6838 19080 19080 19075 QEplus033719.raw F4 1160.3 1135.1 1179.6 772.5 1267.3 983 386 2.48 1 FALSE 0.0003211 0.006239 0.473 -250 90167 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGYFDEEMNR [KQ].rGYFDEEMNR.[IV] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.6274 0 1 1 1 515.91602 1545.73349 1545.73174 1.13 0.00058 0/0 0 0 34392132 HCD 30 MS2 27.74489 782.6 54.23 64.686 19081 19081 19075 QEplus033719.raw F4 851.9 598.9 792.3 784.2 828.6 839.8 68 4.67 2 FALSE 1.14E-05 4.67E-08 1.49 -250 90172 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNVTIK [K].gNVTIk.[EIL] N-Term(TMT6plex); K6(TMT6plex) 5 Q9CQW2; Q8VEH3 ADP-ribosylation factor-like protein 8B OS=Mus musculus OX=10090 GN=Arl8b PE=1 SV=1;ADP-ribosylation factor-like protein 8A OS=Mus musculus OX=10090 GN=Arl8a PE=1 SV=1 Q9CQW2; Q8VEH3; F6QKK2; A0A0N4SVB8; Q9DAB3 ADP-ribosylation factor-like protein 8B OS=Mus musculus OX=10090 GN=Arl8b PE=1 SV=1; ADP-ribosylation factor-like protein 8A OS=Mus musculus OX=10090 GN=Arl8a PE=1 SV=1; ADP-ribosylation factor-like protein 8A (Fragment) OS=Mus musculus OX=10090 GN=Arl8a PE=1 SV=1; ADP-ribosylation factor-like protein 8B OS=Mus musculus OX=10090 GN=Arl8b PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Arl8b PE=2 SV=1 0 2 2 0.2949 0 1 1 1 545.3562 1089.70513 1089.70322 1.75 0.00096 0/0 0 0 24148598 HCD 30 MS2 34.63358 1624.6 80.855 64.6883 19082 19082 19075 QEplus033719.raw F4 1856.4 1215.6 1608.9 1406.9 2113.3 1546.7 154 2.17 2 FALSE 0.003768 0.07153 0.084 -250 90173 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNVTLK [K].gNVTLk.[EIL] N-Term(TMT6plex); K6(TMT6plex) 3 Q99JZ4 GTP-binding protein SAR1a OS=Mus musculus OX=10090 GN=Sar1a PE=1 SV=1 Q3TXJ4; Q99JZ4; P36536 Uncharacterized protein OS=Mus musculus OX=10090 GN=Sar1a PE=2 SV=1; GTP-binding protein SAR1a OS=Mus musculus OX=10090 GN=Sar1a PE=1 SV=1; GTP-binding protein SAR1a OS=Mus musculus OX=10090 GN=Sar1a PE=1 SV=1 0 2 2 0.2949 0 1 2 2 545.3562 1089.70513 1089.70322 1.75 0.00096 0/0 0 0 24148598 HCD 30 MS2 34.63358 1624.6 80.855 64.6883 19082 19082 19075 QEplus033719.raw F4 1856.4 1215.6 1608.9 1406.9 2113.3 1546.7 154 2.17 1 FALSE 0.003768 0.07153 0.084 -250 90187 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSVSLK [K].gSVSLk.[E] N-Term(TMT6plex); K6(TMT6plex) 2 Q9CQC9 GTP-binding protein SAR1b OS=Mus musculus OX=10090 GN=Sar1b PE=1 SV=1 Q3U281; Q9CQC9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Sar1b PE=2 SV=1; GTP-binding protein SAR1b OS=Mus musculus OX=10090 GN=Sar1b PE=1 SV=1 0 2 2 0.0694 0 1 1 1 524.84296 1048.67864 1048.67667 1.88 0.00099 0/0 0 0 13082163 HCD 30 MS2 55.98368 1449 110 64.6933 19084 19084 19075 QEplus033719.raw F4 1438.4 1064.4 1458.5 1392.7 1809 1531.1 66 1.73 1 FALSE 0.005181 0.08847 0.038 -250 90197 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPPPGMGLNQNR [R].sPPPGMGLNQNR.[G] N-Term(TMT6plex) 1 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" 0 2 2 0.5766 0 1 1 1 748.89685 1496.78642 1496.78411 1.54 0.00116 0/0 0 0 12663592 HCD 30 MS2 0 404.5 110 64.6958 19085 19085 19075 QEplus033719.raw F4 409.3 398.6 441.8 298.3 493.5 385.5 308 2.74 1 FALSE 1.14E-05 4.04E-07 1.312 -250 90212 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LPQANK [K].lPQANk.[S] N-Term(TMT6plex); K6(TMT6plex) 9 Q8K019 Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=2 Q8K019; A0A087WRN1; F8WI22; Q8K019-3; Q8K019-2; A0A087WQA0; Q3UR37; Q3UDL9; Q3TSZ0 Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=2; Bcl-2-associated transcription factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Isoform 3 of Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1; Isoform 2 of Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1; Bcl-2-associated transcription factor 1 OS=Mus musculus OX=10090 GN=Bclaf1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Bclaf1 PE=2 SV=1 0 2 2 0.4242 0 1 1 1 564.86163 1128.71599 1128.71411 1.66 0.00094 0/0 0 0 10334341 HCD 30 MS2 29.6587 1009 110 64.7056 19088 19088 19086 QEplus033719.raw F4 1111.5 790.3 1069.6 872.1 1148.4 1062.4 127 1.98 1 FALSE 0.003159 0.06176 0.109 -250 90222 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LIVDGR [K].lIVDGR.[GV] N-Term(TMT6plex) 9 Q8C5Q5 T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1 Q3TET0; Q3UDB1; Q3UIJ0; A0A0N4SV22; Q8C5Q5; A0A0N4SV00; Q3TJN2; Q3THH8; P80313 T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta (Fragment) OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=1 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=1 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=1 SV=1 0 2 2 0.2661 0 1 1 1 451.28763 901.56798 901.56683 1.27 0.00057 0/0 0 0 80384960 HCD 30 MS2 18.72626 686.9 16.023 64.7079 19089 19089 19086 QEplus033719.raw F4 716.1 576.4 790 530.5 659.1 849.4 152 2.33 1 FALSE 0.002334 0.04645 0.153 -250 90232 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLNDDVVK [K].hLNDDVVk.[VI] N-Term(TMT6plex); K8(TMT6plex) 5 P49817 Caveolin-1 OS=Mus musculus OX=10090 GN=Cav1 PE=1 SV=1 H3BKG0; D3Z148; P49817-2; P49817; D3Z0J2 Caveolin-1 OS=Mus musculus OX=10090 GN=Cav1 PE=1 SV=1; Caveolin (Fragment) OS=Mus musculus OX=10090 GN=Cav1 PE=1 SV=2; Isoform 2 of Caveolin-1 OS=Mus musculus OX=10090 GN=Cav1; Caveolin-1 OS=Mus musculus OX=10090 GN=Cav1 PE=1 SV=1; Caveolin (Fragment) OS=Mus musculus OX=10090 GN=Cav1 PE=1 SV=1 0 3 3 0.615 0 1 1 1 466.61063 1397.81733 1397.81529 1.46 0.00068 0/0 0 0 30847148 HCD 30 MS2 32.71637 786.4 42.203 64.7101 19090 19090 19086 QEplus033719.raw F4 808.8 741.5 821.2 582.6 943.1 821.2 318 4.13 1 FALSE 1.14E-05 3.48E-06 1.134 -250 90256 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPQYGTVEK [K].gPQYGTVEk.[A] N-Term(TMT6plex); K9(TMT6plex) 3 Q9WVE8 Protein kinase C and casein kinase substrate in neurons protein 2 OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1 Q3UP40; Q9WVE8; A0A2R8W750 Protein kinase C and casein kinase substrate in neurons protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1; Protein kinase C and casein kinase substrate in neurons protein 2 OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1; Protein kinase C and casein kinase substrate in neurons protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1 0 3 3 0.345 0 1 1 1 479.61047 1436.81687 1436.81495 1.33 0.00064 0/0 0 0 12822275 HCD 30 MS2 28.45023 972.7 110 64.7172 19093 19093 19086 QEplus033719.raw F4 997.2 772.9 1051.9 831 1091.6 1091.8 485 3.13 1 FALSE 0.0001187 0.003115 0.554 -250 90263 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAEEADEQANAHLTK [R].qAEEADEQANAHLTk.[F] N-Term(TMT6plex); K15(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 0 3 3 0.868 0 1 1 1 705.03656 2113.09513 2113.09258 1.2 0.00085 0/0 0 0 8131023 HCD 30 MS2 0 407.3 110 64.7197 19094 19094 19086 QEplus033719.raw F4 505.5 150.1 322.3 828.7 199.2 438.3 341 6.97 1 FALSE 1.14E-05 6.31E-16 4.308 -250 90267 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVEVLTNQR [R].qVEVLTNQR.[A] N-Term(TMT6plex) 3 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; Q9JJY2; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin (Fragment) OS=Mus musculus OX=10090 GN=des PE=4 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 2 2 0.6458 0 1 1 1 658.38245 1315.75762 1315.75313 3.41 0.00224 0/0 0 0 8621884 HCD 30 MS2 29.33872 742.6 110 64.7222 19095 19095 19086 QEplus033719.raw F4 863.7 422 728.7 892.8 570.8 977.4 347 3.19 1 FALSE 1.14E-05 1.47E-05 1.016 -250 90290 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGISEQK [K].vGISEQk.[F] N-Term(TMT6plex); K7(TMT6plex) 2 Q9ERU9 E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 Q8BQK6; Q9ERU9 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ranbp2 PE=2 SV=2; E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 0 2 2 0.2462 0 1 1 1 609.87738 1218.74748 1218.74581 1.37 0.00084 0/0 0 0 11875913 HCD 30 MS2 39.07551 1218.7 110 64.7345 19099 19099 19097 QEplus033719.raw F4 1258.6 1059.2 1265.8 985.7 1398.6 1344.6 552 1.95 1 FALSE 0.002869 0.05621 0.124 -250 90300 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGADFAK [K].dGADFAk.[W] N-Term(TMT6plex); K7(TMT6plex) 10 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 A0A0U1RPT5; Q9CPQ9; D3YWI1; A0A0U1RPN8; P05063; A6ZI46; D3Z510; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase C OS=Mus musculus OX=10090 GN=Aldoc PE=1 SV=4; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=2; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 0 2 2 0.403 0 1 1 1 591.33295 1181.65862 1181.65666 1.66 0.00098 0/0 0 0 70907784 HCD 30 MS2 22.86793 1295 20.165 64.7367 19100 19100 19097 QEplus033719.raw F4 1585.4 811.5 1282.9 1473.1 1024.7 1592.6 278 2.68 1 FALSE 0.0006216 0.009272 0.417 -250 90304 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VREYELRK [K].vREYELRk.[N] N-Term(TMT6plex); K8(TMT6plex) 3 Q8VC94 60S ribosomal protein L11 OS=Mus musculus OX=10090 GN=Rpl11 PE=2 SV=1 Q8VC94; A2BH06; Q9CXW4 60S ribosomal protein L11 OS=Mus musculus OX=10090 GN=Rpl11 PE=2 SV=1; 60S ribosomal protein L11 (Fragment) OS=Mus musculus OX=10090 GN=Rpl11 PE=1 SV=1; 60S ribosomal protein L11 OS=Mus musculus OX=10090 GN=Rpl11 PE=1 SV=4 2 4 4 0.3577 0 1 1 1 388.49097 1550.94204 1550.94188 0.1 0.00004 0/0 0 0 51577260 HCD 30 MS2 8.208116 665.6 30.056 64.739 19101 19101 19097 QEplus033719.raw F4 582.3 632.8 894.9 476.4 714.4 692.6 384 2.74 1 FALSE 0.001615 0.02637 0.236 -250 90309 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEGAPQVEAGK [K].eAEGAPQVEAGk.[R] N-Term(TMT6plex); K12(TMT6plex) 12 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; F6RGN9; Q3UGC3; E9QA15; F6ZAW1; E9Q0M9; D3Z6I7; S4R1T7; Q8VD79; F6T2Z7; E9QA16; F6QLP8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; H-caldesmon (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 0 2 2 0.6591 0 1 1 1 822.45465 1643.90203 1643.90047 0.95 0.00078 0/0 0 0 44011644 HCD 30 MS2 6.394447 503.6 60.13 64.7413 19102 19102 19097 QEplus033719.raw F4 461.1 497.9 531.5 296.3 788.9 446.1 386 4.84 1 FALSE 1.14E-05 2.16E-11 2.123 -250 90313 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGQVINETSQHHDDLE [R].dGQVINETSQHHDDLE.[-] N-Term(TMT6plex) 6 Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 3 3 0.8484 0 1 1 1 689.32666 2065.96543 2065.96241 1.46 0.00101 0/0 0 0 42717288 HCD 30 MS2 13.00741 339 105.9 64.7437 19103 19103 19097 QEplus033719.raw F4 321.2 294.5 298.2 333.8 507.2 279 55 6.73 1 FALSE 1.14E-05 1.53E-12 2.342 -250 90339 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVCDIPPR [K].tAVcDIPPR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 9 Q7TMM9; P99024; P68372; Q9CWF2 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1 Q7TMM9; Q9D6F9; Q62363; Q80ZV2; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2 "Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Beta-tubulin gene M-beta-2, 3' end (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1" 0 2 2 0.649 0 1 1 1 629.34521 1257.68315 1257.68227 0.7 0.00044 0/0 0 0 73932400 HCD 30 MS2 8.737915 657 27.122 64.7601 19109 19109 19108 QEplus033719.raw F4 673.5 606 702.7 471.9 832.1 655.9 232 3.02 4 FALSE 1.14E-05 0.0005951 0.707 -250 90347 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQQQALEAR [R].lQQQALEAR.[R] N-Term(TMT6plex) 1 Q9CR59 Growth arrest and DNA damage-inducible proteins-interacting protein 1 OS=Mus musculus OX=10090 GN=Gadd45gip1 PE=1 SV=1 Q9CR59 Growth arrest and DNA damage-inducible proteins-interacting protein 1 OS=Mus musculus OX=10090 GN=Gadd45gip1 PE=1 SV=1 0 2 2 0.3391 0 1 1 1 643.37689 1285.74651 1285.74256 3.07 0.00197 0/0 0 0 12030352 HCD 30 MS2 0 775 110 64.7626 19110 19110 19108 QEplus033719.raw F4 726.2 646.8 854.2 730.7 801.8 890.3 356 2.89 1 FALSE 1.14E-05 7.28E-06 1.074 -250 90361 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAEAQIAAK [R].kAEAQIAAk.[N] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 1 P05202 "Aspartate aminotransferase, mitochondrial OS=Mus musculus OX=10090 GN=Got2 PE=1 SV=1" P05202 "Aspartate aminotransferase, mitochondrial OS=Mus musculus OX=10090 GN=Got2 PE=1 SV=1" 1 3 3 0.4898 0 1 1 1 539.68195 1617.03128 1617.03025 0.64 0.00034 0/0 0 0 24495918 HCD 30 MS2 50.65387 1169.5 59.662 64.7671 19112 19112 19108 QEplus033719.raw F4 1241.9 865.5 1164.5 1469.3 896.4 1379.4 302 3.43 1 FALSE 1.14E-05 6.20E-08 1.467 -250 90375 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGEQHEDLNEVAK [K].dGEQHEDLNEVAk.[L] N-Term(TMT6plex); K13(TMT6plex) 3 B1AU25 "Apoptosis-inducing factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Aifm1 PE=1 SV=1" B1AU25; Q9Z0X1; Q2QKE3 "Apoptosis-inducing factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Aifm1 PE=1 SV=1; Apoptosis-inducing factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Aifm1 PE=1 SV=1; Apoptosis-inducing factor short isoform 1 OS=Mus musculus OX=10090 GN=Pdcd8 PE=2 SV=1" 0 3 3 0.8501 0 1 1 1 648.00244 1941.99277 1941.99181 0.5 0.00032 0/0 0 0 11257958 HCD 30 MS2 21.0503 736.4 110 64.7721 19114 19114 19108 QEplus033719.raw F4 722 573 753 770.4 677.9 922.2 259 5.67 1 FALSE 1.14E-05 1.64E-12 2.336 -250 90379 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VADDLHK [K].vADDLHk.[A] N-Term(TMT6plex); K7(TMT6plex) 34 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q6A0E9; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; MKIAA0004 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0004 PE=4 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 3 3 0.4921 0 1 1 1 419.25192 1255.74121 1255.74106 0.13 0.00005 0/0 0 0 12781253 HCD 30 MS2 54.89151 655.6 47.452 64.7744 19115 19115 19108 QEplus033719.raw F4 760.3 468.3 694.4 593.9 668.7 747.9 286 3.15 1 FALSE 9.73E-05 0.002922 0.561 -250 90391 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEGDIK [KN].vEGDIk.[G] N-Term(TMT6plex); K6(TMT6plex) 2 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 E9Q616; A0JLR7 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1 0 2 2 0.1517 0 1 1 1 559.8443 1118.68132 1118.68215 -0.74 -0.00041 0/0 0 0 8477862 HCD 30 MS2 33.59164 979.2 110 64.7819 19118 19118 19108 QEplus033719.raw F4 1261.3 716.7 903.2 863.1 1220.8 910.3 266 1.78 1 FALSE 0.004783 0.08377 0.051 -250 90392 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEGDLK [KN].vEGDLk.[G] N-Term(TMT6plex); K6(TMT6plex) 5 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 A0PJF4; Q6UL10; E9Q616; A0JLR7; Q61484 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Desmoyokin (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1 0 2 2 0.1517 0 1 2 2 559.8443 1118.68132 1118.68215 -0.74 -0.00041 0/0 0 0 8477862 HCD 30 MS2 33.59164 979.2 110 64.7819 19118 19118 19108 QEplus033719.raw F4 1261.3 716.7 903.2 863.1 1220.8 910.3 266 1.78 1 FALSE 0.004783 0.08377 0.051 -250 90401 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMLQQSK [R].eMLQQSk.[I] N-Term(TMT6plex); K7(TMT6plex) 12 P07901; Q71LX8 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4;Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q3TKB9; P07901; Q3TJU7; Q811H6; Q3TKA2; Q80YC2; E9Q3D6; Q3UIF3; A0PJ91; Q71LX8; Q3TKG0; Q8C5U3 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Heat shock protein HSP 90-beta (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 0 2 2 0.4191 0 1 1 1 661.38177 1321.75627 1321.75499 0.97 0.00064 0/0 0 0 71036072 HCD 30 MS2 4.328792 785.3 24.73 64.7892 19120 19120 19119 QEplus033719.raw F4 757.7 576.8 802.5 666.7 987 921.1 446 2.72 2 FALSE 0.0008899 0.01235 0.368 -250 90407 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQLEEAEEEAQR [K].rQLEEAEEEAQR.[A] N-Term(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q7TQJ6; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 2 2 0.76 0 1 1 1 858.93781 1716.86833 1716.87141 -1.79 -0.00154 0/0 0 0 5434485.5 HCD 30 MS2 0 141.1 110 64.7917 19121 19121 19119 QEplus033719.raw F4 130.1 129.5 177.1 107.1 162.7 140.1 196 5 1 FALSE 1.14E-05 4.78E-11 2.058 -250 90412 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NELVQK [K].nELVQk.[FA] N-Term(TMT6plex); K6(TMT6plex) 17 P63101 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 A0A087WQC5; A0A087WR62; Q9QXJ1; A0A087WPS7; D3YW45; A0A1B0GT76; Q80Y77; A0A0R4J2C6; A0A0R4J2C1; A0A087WPI2; A0A2I3BQ03; Q8BWN0; D3YXN6; D3YXF4; Q9QXJ1-2; P63101; Q8R1Y7 Amyloid-beta A4 precursor protein-binding family B member 1 OS=Mus musculus OX=10090 GN=Apbb1 PE=1 SV=1; Amyloid-beta A4 precursor protein-binding family B member 1 OS=Mus musculus OX=10090 GN=Apbb1 PE=1 SV=1; Amyloid-beta A4 precursor protein-binding family B member 1 OS=Mus musculus OX=10090 GN=Apbb1 PE=1 SV=3; Amyloid-beta A4 precursor protein-binding family B member 1 OS=Mus musculus OX=10090 GN=Apbb1 PE=1 SV=1; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; Amyloid-beta A4 precursor protein-binding family B member 1 (Fragment) OS=Mus musculus OX=10090 GN=Apbb1 PE=1 SV=1; Apbb1 protein OS=Mus musculus OX=10090 GN=Apbb1 PE=2 SV=1; Amyloid-beta A4 precursor protein-binding family B member 1 OS=Mus musculus OX=10090 GN=Apbb1 PE=1 SV=1; Amyloid-beta A4 precursor protein-binding family B member 1 OS=Mus musculus OX=10090 GN=Apbb1 PE=1 SV=1; Amyloid-beta A4 precursor protein-binding family B member 1 OS=Mus musculus OX=10090 GN=Apbb1 PE=1 SV=1; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; 14_3_3 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=8; Isoform 2 of Amyloid-beta A4 precursor protein-binding family B member 1 OS=Mus musculus OX=10090 GN=Apbb1; 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; Apbb1 protein (Fragment) OS=Mus musculus OX=10090 GN=Apbb1 PE=2 SV=1 0 2 2 0.2458 0 1 1 1 594.87195 1188.73662 1188.73524 1.16 0.00069 0/0 0 0 64228632 HCD 30 MS2 20.84667 1135.5 21.555 64.794 19122 19122 19119 QEplus033719.raw F4 1267.8 923.4 1146.4 840.2 1477.4 1157.5 478 2.4 1 FALSE 0.004122 0.07593 0.072 -250 90421 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPEILK [K].rPEILk.[HQ] N-Term(TMT6plex); K6(TMT6plex) 10 Q5SWR1; Q5SVG5 AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=2 SV=1;AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=1 Q8CC13; Q5SWR1; Q5SVG5; O35643; H3BIY9; Q5SVG4; H3BKM0; Q9DBG3; Q3TVN4; Q3U1K9 AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=2 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=2 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=1; AP-1 complex subunit beta-1 OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=2; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1; AP-2 complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=2 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=2 SV=1 0 3 3 0.4339 0 1 1 2 405.2728 1213.80384 1213.80326 0.47 0.00019 0/0 0 0 57502656 HCD 30 MS2 42.78979 661.4 15.111 64.7962 19123 19123 19119 QEplus033719.raw F4 688.4 532.8 696.6 567.6 805.7 677.3 124 2.42 2 FALSE 0.006011 0.09916 0.009 -250 90433 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIIHGSDSVK [R].nIIHGSDSVk.[S] N-Term(TMT6plex); K10(TMT6plex) 2 Q5NC81 Nucleoside diphosphate kinase OS=Mus musculus OX=10090 GN=Nme1 PE=1 SV=1 Q5NC80; Q5NC81 Nucleoside diphosphate kinase (Fragment) OS=Mus musculus OX=10090 GN=Nme1 PE=1 SV=1; Nucleoside diphosphate kinase OS=Mus musculus OX=10090 GN=Nme1 PE=1 SV=1 0 3 3 0.6869 0 1 1 1 509.96826 1527.89023 1527.88951 0.47 0.00024 0/0 0 0 25328454 HCD 30 MS2 34.66806 1273.1 67.477 64.8008 19125 19125 19119 QEplus033719.raw F4 1476.3 837.7 1073.9 1527.6 1543.9 1179.1 349 3.96 1 FALSE 1.14E-05 1.40E-05 1.019 -250 90438 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLDIQNK [K].rLDIQNk.[R] N-Term(TMT6plex); K7(TMT6plex) 1 O35295 Transcriptional activator protein Pur-beta OS=Mus musculus OX=10090 GN=Purb PE=1 SV=3 O35295 Transcriptional activator protein Pur-beta OS=Mus musculus OX=10090 GN=Purb PE=1 SV=3 1 3 3 0.2343 0 1 1 1 448.95068 1344.8375 1344.83635 0.85 0.00038 0/0 0 0 18150364 HCD 30 MS2 12.90923 831.6 62.597 64.803 19126 19126 19119 QEplus033719.raw F4 931.8 623 950 728.2 780.8 976 507 3.03 1 FALSE 0.001101 0.01421 0.343 -250 90451 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERLYPLR [K].eRLYPLR.[K] N-Term(TMT6plex) 1 Q6ZWV7 60S ribosomal protein L35 OS=Mus musculus OX=10090 GN=Rpl35 PE=1 SV=1 Q6ZWV7 60S ribosomal protein L35 OS=Mus musculus OX=10090 GN=Rpl35 PE=1 SV=1 1 3 3 0.3443 0 1 1 1 392.57532 1175.7114 1175.70981 1.35 0.00053 0/0 0 0 9826928 HCD 30 MS2 40.26433 627.3 82.618 64.8078 19128 19128 19119 QEplus033719.raw F4 597.9 509.9 703.7 471.7 781.7 698.8 510 2.73 1 FALSE 3.35E-05 0.00132 0.637 -250 90463 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTGPSGFK [K].dTGPSGFk.[D] N-Term(TMT6plex); K8(TMT6plex) 2 B9EIV8 "Solute carrier family 12, member 7 OS=Mus musculus OX=10090 GN=Slc12a7 PE=2 SV=1" B9EIV8; Q9WVL3-2 "Solute carrier family 12, member 7 OS=Mus musculus OX=10090 GN=Slc12a7 PE=2 SV=1; Isoform 2 of Solute carrier family 12 member 7 OS=Mus musculus OX=10090 GN=Slc12a7" 0 2 2 0.4298 0 1 1 1 633.85876 1266.71025 1266.70942 0.65 0.00041 0/0 0 0 4192001.75 HCD 30 MS2 19.67862 1022 110 64.8173 19131 19131 19130 QEplus033719.raw F4 970.9 982.5 1088.1 659.4 1503.1 927.8 343 2.28 1 FALSE 0.001001 0.01318 0.356 -250 90471 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGADFAK [K].dGADFAk.[W] N-Term(TMT6plex); K7(TMT6plex) 10 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 A0A0U1RPT5; Q9CPQ9; D3YWI1; A0A0U1RPN8; P05063; A6ZI46; D3Z510; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase C OS=Mus musculus OX=10090 GN=Aldoc PE=1 SV=4; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=2; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 0 3 3 0.4128 0 1 1 1 394.55627 1181.65427 1181.65666 -2.02 -0.0008 0/0 0 0 9029867 HCD 30 MS2 38.73272 730.3 88.126 64.8196 19132 19132 19130 QEplus033719.raw F4 776.5 456.3 746.9 752.5 632.7 1017.1 242 2.18 1 FALSE 0.003937 0.07355 0.078 -250 90475 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEGAPQVEAGK [K].eAEGAPQVEAGk.[R] N-Term(TMT6plex); K12(TMT6plex) 12 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; F6RGN9; Q3UGC3; E9QA15; F6ZAW1; E9Q0M9; D3Z6I7; S4R1T7; Q8VD79; F6T2Z7; E9QA16; F6QLP8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; H-caldesmon (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 0 3 3 0.713 0 1 1 1 548.63885 1643.90201 1643.90047 0.94 0.00051 0/0 0 0 114777800 HCD 30 MS2 7.776392 575.2 17.393 64.8218 19133 19133 19130 QEplus033719.raw F4 580.2 546.5 616.8 377.6 842.7 487.4 386 3.45 1 FALSE 1.14E-05 8.10E-10 1.824 -250 90488 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKQDGDSFR [K].lkQDGDSFR.[M] N-Term(TMT6plex); K2(TMT6plex) 1 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 1 3 3 0.4622 0 1 1 1 508.62463 1523.85935 1523.85821 0.75 0.00038 0/0 0 0 29229298 HCD 30 MS2 17.20071 1430 85.673 64.8264 19135 19135 19130 QEplus033719.raw F4 1392.2 1237.1 1626 1312.8 1400.7 1611 407 2.38 1 FALSE 0.002869 0.0567 0.123 -250 90496 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YHNVGLSK [K].yHNVGLSk.[C] N-Term(TMT6plex); K8(TMT6plex) 9 Q60668; G5E8G0 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2;Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1 Q60668; F6ZV59; G5E8G0; Q60668-4; F7A465; G3X9W0; Q60668-2; Q60668-3; F6SHF3 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein D0 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1; Isoform 4 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd; Heterogeneous nuclear ribonucleoprotein D0 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd; Isoform 3 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd; Heterogeneous nuclear ribonucleoprotein D0 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1 0 3 3 0.5273 0 1 1 1 459.27451 1375.80896 1375.80981 -0.61 -0.00028 0/0 0 0 18712336 HCD 30 MS2 29.98837 931.8 38.514 64.8286 19136 19136 19130 QEplus033719.raw F4 1015.7 630.6 927.6 976.8 960.7 1079.6 471 2.75 2 FALSE 0.0003996 0.007241 0.453 -250 90503 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTGTVQVLK [K].rTGTVQVLk.[R] N-Term(TMT6plex); K9(TMT6plex) 14 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 Q9QXZ0-3; B1ARU4; E9QA63; Q80TZ5; E9QNP1; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8 Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; MKIAA0465 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 1 3 3 0.3374 0 1 1 1 487.31726 1459.93723 1459.93607 0.79 0.00039 0/0 0 0 15858289 HCD 30 MS2 35.76474 954.6 87.774 64.8309 19137 19137 19130 QEplus033719.raw F4 1041.8 587 1111.2 901.6 723.7 1362.1 266 4.06 3 FALSE 1.14E-05 2.90E-05 0.959 -250 90534 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVDSVVGGACR [R].nVDSVVGGAcR.[L] N-Term(TMT6plex); C10(Carbamidomethyl) 5 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.6952 0 1 1 1 681.854 1362.70073 1362.69971 0.75 0.00051 0/0 0 0 9521866 HCD 30 MS2 18.65873 518.7 110 64.8454 19142 19142 19141 QEplus033719.raw F4 544.4 330.6 528.9 643.4 357.7 707.3 213 3.51 2 FALSE 1.14E-05 7.89E-09 1.637 -250 90550 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVEVDSGR [R].lVEVDSGR.[Q] N-Term(TMT6plex) 2 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 P14733; Q8C553 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3; IF rod domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Lmnb1 PE=2 SV=1 0 2 2 0.5734 0 1 1 1 552.31696 1103.62663 1103.6258 0.75 0.00042 0/0 0 0 71333184 HCD 30 MS2 29.28315 763 18.796 64.8502 19144 19144 19141 QEplus033719.raw F4 730.2 782 814.6 473 1003.7 774.4 334 2.86 1 FALSE 2.26E-05 0.001008 0.661 -250 90566 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANEDVCQDCMK [K].aNEDVcQDcMk.[L] N-Term(TMT6plex); C6(Carbamidomethyl); C9(Carbamidomethyl); K11(TMT6plex) 21 Q3U8C4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1 Q3TID4; K3W4L3; Q3TWF9; Q3U8C4; Q3U825; Q8BFQ1; Q3TWL8; Q3TWM9; Q3TKK3; J3QPG5; Q3TIT5; Q3TXJ0; B2RUD7; Q3TXP9; Q3UFE8; Q3TWE9; Q3UAS4; Q3TKB2; Q3U5W2; Q3U897; E9PZ00 Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Prosaposin OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Prosaposin OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Prosaposin OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Psap protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Prosaposin OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1 0 3 3 0.7722 0 1 1 1 609.95337 1827.84555 1827.84396 0.87 0.00053 0/0 0 0 13140117 HCD 30 MS2 50.72571 1106.8 110 64.855 19146 19146 19141 QEplus033719.raw F4 1006.2 1096.1 1123.7 827.5 1479.3 1108 67 3.16 1 FALSE 1.14E-05 8.67E-06 1.059 -250 90572 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVGMLTR [R].gVGMLTR.[L] N-Term(TMT6plex) 4 P28660 Nck-associated protein 1 OS=Mus musculus OX=10090 GN=Nckap1 PE=1 SV=2 P28660; A1L0U6; A2AS98; P28660-2 Nck-associated protein 1 OS=Mus musculus OX=10090 GN=Nckap1 PE=1 SV=2; Nckap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Nckap1 PE=2 SV=1; Nck-associated protein 1 OS=Mus musculus OX=10090 GN=Nckap1 PE=1 SV=1; Isoform 2 of Nck-associated protein 1 OS=Mus musculus OX=10090 GN=Nckap1 0 2 2 0.2727 0 1 1 1 481.78732 962.56737 962.56545 1.99 0.00096 0/0 0 0 11925647 HCD 30 MS2 39.11382 1289.5 110 64.8575 19147 19147 19141 QEplus033719.raw F4 1463.3 1046.3 1390.8 1139.9 1377.7 1319.2 202 2.31 1 FALSE 0.001351 0.01928 0.287 -250 90582 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGETTTAEEIK [K].sGETTTAEEIk.[A] N-Term(TMT6plex); K11(TMT6plex) 1 Q8VCW8 "Medium-chain acyl-CoA ligase ACSF2, mitochondrial OS=Mus musculus OX=10090 GN=Acsf2 PE=1 SV=1" Q8VCW8 "Medium-chain acyl-CoA ligase ACSF2, mitochondrial OS=Mus musculus OX=10090 GN=Acsf2 PE=1 SV=1" 0 2 2 0.6608 0 1 1 1 812.44775 1623.88823 1623.88415 2.51 0.00204 0/0 0 0 8569474 HCD 30 MS2 0 570.6 110 64.86 19148 19148 19141 QEplus033719.raw F4 476.4 603 749.4 497.2 434.7 662.6 436 4.01 1 FALSE 1.14E-05 4.11E-09 1.69 -250 90599 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQQEATEHVTESEER [R].lQQEATEHVTESEER.[F] N-Term(TMT6plex) 4 Q99K41 EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1 Q3UUU0; Q99K41; Q3U254; Q3USG5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; C1q domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1 0 3 3 0.8123 0 1 1 1 672.33441 2014.98868 2014.98789 0.39 0.00026 0/0 0 0 4798665.5 HCD 30 MS2 8.477427 280.1 110 64.865 19150 19150 19141 QEplus033719.raw F4 279.6 241.7 336.2 241.2 289.5 292.4 160 6.02 1 FALSE 1.14E-05 6.31E-16 2.995 -250 90636 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEPLCK [K].eAEPLck.[R] N-Term(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex) 16 D3YXZ3; Q5UE59 Kinesin light chain OS=Mus musculus OX=10090 GN=Klc2 PE=1 SV=1;Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1 Q7M6Z7; Q7M701; D3YXZ3; Q7M700; Q91YS4; Q5UE59; Q7M703; Q8CD76; O88448; A0A5F8MPZ2; Q7M6Z8; Q7M6Z6; Q7M6Z9; E9Q7C9; Q7M702; Q7TNF4 Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc2 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc2 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1; Kinesin light chain 2 OS=Mus musculus OX=10090 GN=Klc2 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain (Fragment) OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1 0 2 2 0.5255 0 1 1 1 652.86969 1304.7321 1304.72844 2.8 0.00183 0/0 0 0 13155585 HCD 30 MS2 6.888328 1068.2 110 64.8821 19156 19156 19152 QEplus033719.raw F4 1239.1 718.2 1082.2 994.1 1020 1355.7 391 2.55 2 FALSE 0.0006294 0.009414 0.414 -250 90640 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVDRDILK [R].rVDRDILk.[E] N-Term(TMT6plex); K8(TMT6plex) 7 Q3UR33; Q61029-2 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1;Isoform Delta of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo" Q3UR33; Q3U7B3; Q61029; Q3U955; Q61029-4; Q61029-3; Q61029-2 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Isoform Gamma of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo; Isoform Epsilon of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo; Isoform Delta of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo" 2 4 4 0.2872 0 1 1 1 368.98904 1472.93435 1472.93132 2.06 0.00076 0/0 0 0 10612359 HCD 30 MS2 29.2772 503.4 82.759 64.8869 19158 19158 19152 QEplus033719.raw F4 459.9 507.6 658.4 348.7 521 524.5 361 2.89 2 FALSE 0.005512 0.09335 0.025 -250 90659 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANEDVCQDCMK [K].aNEDVcQDcMk.[L] N-Term(TMT6plex); C6(Carbamidomethyl); C9(Carbamidomethyl); K11(TMT6plex) 21 Q3U8C4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1 Q3TID4; K3W4L3; Q3TWF9; Q3U8C4; Q3U825; Q8BFQ1; Q3TWL8; Q3TWM9; Q3TKK3; J3QPG5; Q3TIT5; Q3TXJ0; B2RUD7; Q3TXP9; Q3UFE8; Q3TWE9; Q3UAS4; Q3TKB2; Q3U5W2; Q3U897; E9PZ00 Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Prosaposin OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Prosaposin OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Prosaposin OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Psap protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Prosaposin OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1 0 2 2 0.8861 0 1 1 1 914.42651 1827.84575 1827.84396 0.98 0.00089 0/0 0 0 7519554 HCD 30 MS2 0 442.9 110 64.8944 19161 19161 19152 QEplus033719.raw F4 420.8 495.8 506.3 340.8 496.7 397.3 67 4.74 1 FALSE 1.14E-05 9.68E-10 1.81 -250 90664 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGQVINETSQHHDDLE [R].dGQVINETSQHHDDLE.[-] N-Term(TMT6plex) 6 Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.8385 0 1 1 1 1033.48462 2065.96196 2065.96241 -0.22 -0.00022 0/0 0 0 5628491.5 HCD 30 MS2 0 111.2 110 64.897 19162 19162 19152 QEplus033719.raw F4 112.9 110.3 62.4 98.6 261.4 21.8 48 4.21 1 FALSE 1.14E-05 1.58E-10 1.959 -250 90669 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQYESVAAK [R].qQYESVAAk.[N] N-Term(TMT6plex); K9(TMT6plex) 8 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 3 3 0.7016 0 1 1 1 494.6178 1481.83884 1481.83641 1.64 0.00081 0/0 0 0 227078896 HCD 30 MS2 9.20642 561.5 7.725 64.9043 19164 19164 19163 QEplus033719.raw F4 500.9 560.9 633.5 424.2 748 501.4 413 3.72 2 FALSE 1.14E-05 4.18E-06 1.119 -250 90676 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDQTEYLEER [K].eDQTEYLEER.[R-] N-Term(TMT6plex) 11 P07901; Q71LX8 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4;Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q3TKB9; P07901; Q3TJU7; B7ZC50; Q3TKA2; Q3UIF3; A0PJ91; Q8C2A9; Q71LX8; Q3TKG0; Q8C5U3 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 0 2 2 0.6517 0 1 1 1 770.87085 1540.73442 1540.73285 1.02 0.00079 0/0 0 0 68521392 HCD 30 MS2 3.064642 423.4 26.629 64.9066 19165 19165 19163 QEplus033719.raw F4 414.6 319.6 472.4 346.4 513.5 474.1 75 4.22 2 FALSE 1.14E-05 9.71E-08 1.43 -250 90684 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGADFAK [K].dGADFAk.[W] N-Term(TMT6plex); K7(TMT6plex) 10 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 A0A0U1RPT5; Q9CPQ9; D3YWI1; A0A0U1RPN8; P05063; A6ZI46; D3Z510; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase C OS=Mus musculus OX=10090 GN=Aldoc PE=1 SV=4; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=2; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 0 3 3 0.4171 0 1 1 1 394.55762 1181.6583 1181.65666 1.39 0.00055 0/0 0 0 18779122 HCD 30 MS2 25.86376 658.5 55.407 64.9088 19166 19166 19163 QEplus033719.raw F4 712.8 407.9 645.4 760.1 537.9 887.1 275 1.99 1 FALSE 0.002448 0.0486 0.146 -250 90692 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDPSVLHTEEMR [R].qDPSVLHTEEMR.[F] N-Term(TMT6plex) 6 Q3U9V1 TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1 E9Q1X9; F8WJK8; Q3U9V1; Q3U8D2; Q3U3N7; Q99L47 Hsc70-interacting protein (Fragment) OS=Mus musculus OX=10090 GN=St13 PE=1 SV=8; Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1 0 3 3 0.7327 0 1 1 1 557.61774 1670.83866 1670.83694 1.03 0.00057 0/0 0 0 14233515 HCD 30 MS2 51.93009 976.7 110 64.9138 19168 19168 19163 QEplus033719.raw F4 1022.9 768.6 971.8 996.8 1111.9 988.2 177 5.05 1 FALSE 1.14E-05 1.55E-09 1.771 -250 90711 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVEVLTNQR [R].qVEVLTNQR.[A] N-Term(TMT6plex) 3 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; Q9JJY2; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin (Fragment) OS=Mus musculus OX=10090 GN=des PE=4 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 3 3 0.5192 0 1 1 1 439.25381 1315.74689 1315.75313 -4.74 -0.00208 0/0 0 0 208256144 HCD 30 MS2 35.47034 369.1 6.691 64.9209 19171 19171 19163 QEplus033719.raw F4 420 254.8 390.9 378.7 335.3 434.9 367 2.08 1 FALSE 0.001343 0.01887 0.291 -250 90717 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEFQK [R].eAEFQk.[M] N-Term(TMT6plex); K6(TMT6plex) 9 Q5SX40; Q5SX39; B2RY26 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1 Q2TAW4; Q5SX40; Q5SX39; G3UW82; B2RWX0; B2RQQ1; I6L963; B2RY26; B2RXX9 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1" 0 2 2 0.1679 0 1 1 1 605.34833 1209.68938 1209.68796 1.17 0.00071 0/0 0 0 54250488 HCD 30 MS2 23.73976 1207.7 25.09 64.9231 19172 19172 19163 QEplus033719.raw F4 1523.9 265.6 535.5 2966 494.4 1460.6 313 2.68 3 FALSE 0.003608 0.06915 0.09 -250 90724 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SESPKEPEQLRK [K].sESPkEPEQLRk.[L] N-Term(TMT6plex); K5(TMT6plex); K12(TMT6plex) 7 Q3UK83 Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1 Q3TFB1; Q3UK83; P49312; Q3U7F3; P49312-2; Q3TIK8; Q5EBP8 Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=2; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Isoform Short of Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=1 2 4 4 0.6346 0 1 1 1 529.56561 2115.24062 2115.23768 1.39 0.00074 0/0 0 0 42430648 HCD 30 MS2 21.36857 1075.4 34.455 64.9254 19173 19173 19163 QEplus033719.raw F4 1159.9 1118.5 1189.7 722.1 1322.4 939.6 377 2.6 1 FALSE 0.0006383 0.009851 0.407 -250 90729 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIAEDSDRKYEEVAR [K].hIAEDSDRkYEEVAR.[K] N-Term(TMT6plex); K9(TMT6plex) 7 P58774; A2AIM4; P58774-2 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 Q9D1R6; Q91VH3; P58774; A2AIM4; Q3SX28; P58774-2; Q61344 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1 2 5 5 0.6377 0 1 1 1 456.04684 2276.20512 2276.20353 0.7 0.00032 0/0 0 0 31563264 HCD 30 MS2 19.24434 503.1 42.791 64.9327 19175 19175 19174 QEplus033719.raw F4 618.7 231.3 558.5 653.9 222.2 734 369 4.03 3 TRUE 1.14E-05 7.97E-07 1.256 -250 90743 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YSEGYPGK [K].ySEGYPGk.[R] N-Term(TMT6plex); K8(TMT6plex) 2 Q9CZN7 "Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" Q9CZN7-2; Q9CZN7 "Isoform 2 of Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2; Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" 0 2 2 0.5679 0 1 1 1 679.87122 1358.73516 1358.73564 -0.36 -0.00024 0/0 0 0 7517443.5 HCD 30 MS2 48.57814 1108.7 110 64.94 19178 19178 19174 QEplus033719.raw F4 1187.7 1082.6 1234.5 975.5 1150.7 1021.3 313 2.43 1 FALSE 0.0001187 0.003155 0.553 -250 90758 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPPENSDIGTGKK [K].nPPENSDIGTGkk.[E] N-Term(TMT6plex); K12(TMT6plex); K13(TMT6plex) 9 Q3TQR3 Eukaryotic translation initiation factor 5 OS=Mus musculus OX=10090 GN=Eif5 PE=1 SV=1 Q6PHA6; Q05C65; Q05CM5; Q3TKY2; Q05CH7; A0A1Y7VJG2; Q3TT65; Q8BVV6; Q3TQR3 Eif5 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif5 PE=2 SV=1; Eif5 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif5 PE=2 SV=1; Eif5 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif5 PE=2 SV=1; Eukaryotic translation initiation factor 5 (Fragment) OS=Mus musculus OX=10090 GN=Eif5 PE=2 SV=1; Eukaryotic translation initiation factor 5 OS=Mus musculus OX=10090 GN=Eif5 PE=2 SV=1; Eukaryotic translation initiation factor 5 (Fragment) OS=Mus musculus OX=10090 GN=Eif5 PE=1 SV=1; eIF2B_5 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif5 PE=2 SV=1; Eukaryotic translation initiation factor 5 OS=Mus musculus OX=10090 GN=Eif5 PE=1 SV=1; Eukaryotic translation initiation factor 5 OS=Mus musculus OX=10090 GN=Eif5 PE=1 SV=1 1 3 3 0.6895 0 1 1 1 682.06061 2044.16727 2044.16418 1.51 0.00103 0/0 0 0 3995752.25 HCD 30 MS2 38.22189 507.7 110 64.945 19180 19180 19174 QEplus033719.raw F4 541.8 383.4 531.4 504.4 483 602.4 435 3.8 1 FALSE 1.14E-05 6.77E-09 1.649 -250 90806 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NALAHALQSSR [K].nALAHALQSSR.[H] N-Term(TMT6plex) 8 P13541; P13542 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; P13541; G3UW82; B2RQQ1; I6L963; B1AR69; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.7661 0 1 1 1 698.89722 1396.78716 1396.78583 0.95 0.00067 0/0 0 0 13706321 HCD 30 MS2 0 485 110 64.9646 19187 19187 19185 QEplus033719.raw F4 672.2 163.2 389.3 1003.2 196 486 323 3.89 2 FALSE 1.14E-05 4.38E-09 1.685 -250 90814 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELEQLGR [R].eLEQLGR.[Q] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.0905 0 1 1 1 537.31189 1073.6165 1073.61524 1.18 0.00063 0/0 0 0 75369360 HCD 30 MS2 13.69964 796.7 16.81 64.9668 19188 19188 19185 QEplus033719.raw F4 815 741.9 914.9 639.2 850.6 818.7 350 2.32 2 FALSE 0.0008899 0.01235 0.368 -250 90820 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NALAHALQSSR [K].nALAHALQSSR.[H] N-Term(TMT6plex) 8 P13541; P13542 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; P13541; G3UW82; B2RQQ1; I6L963; B1AR69; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 3 3 0.7506 0 1 1 1 466.26736 1396.78754 1396.78583 1.23 0.00057 0/0 0 0 72556880 HCD 30 MS2 30.85602 400.4 19.523 64.9691 19189 19189 19185 QEplus033719.raw F4 494.5 204.6 418.1 576.9 259.6 448.6 326 4.49 2 FALSE 1.14E-05 3.40E-10 1.896 -250 90837 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IRSEFK [K].iRSEFk.[R] N-Term(TMT6plex); K6(TMT6plex) 5 Q542G9 Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1 Q9CZI7; B0V2N5; Q99KH3; Q542G9; Q3UCD3 Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1 1 3 3 0.2771 0 1 1 1 413.26065 1237.7674 1237.76688 0.42 0.00017 0/0 0 0 64676740 HCD 30 MS2 13.4412 753.2 16.912 64.9736 19191 19191 19185 QEplus033719.raw F4 653.8 779.9 836.3 478.5 1008.4 762.2 354 2.31 1 FALSE 0.004791 0.08381 0.051 -250 90846 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EILPSTR [R].eILPSTR.[L] N-Term(TMT6plex) 4 Q78PY7 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 Q78PY7; Q3UZI3; Q3TW51; Q3TRW3 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1 0 2 2 0.188 0 1 1 1 522.81708 1044.62688 1044.62508 1.73 0.0009 0/0 0 0 41480584 HCD 30 MS2 41.81638 685.5 21.516 64.9759 19192 19192 19185 QEplus033719.raw F4 671.6 594 739.2 560.6 800.6 746.9 320 2.34 1 FALSE 0.0005076 0.007995 0.439 -250 90860 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGLVDEK [R].gGLVDEk.[A] N-Term(TMT6plex); K7(TMT6plex) 9 Q3UIX8; A0A0J9YUM4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctbp2 PE=2 SV=1;C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1 PE=1 SV=1 O88712-2; Q3UIX8; P56546; A0A0J9YUM4; Q91YZ2; A0A0J9YU62; O88712-3; P56546-2; O88712 Isoform 2 of C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctbp2 PE=2 SV=1; C-terminal-binding protein 2 OS=Mus musculus OX=10090 GN=Ctbp2 PE=1 SV=2; C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1 PE=1 SV=1; C-terminal-binding protein 2 OS=Mus musculus OX=10090 GN=Ctbp2 PE=1 SV=1; C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1 PE=1 SV=1; Isoform 3 of C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1; Isoform 2 of C-terminal-binding protein 2 OS=Mus musculus OX=10090 GN=Ctbp2; C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1 PE=1 SV=2 0 2 2 0.3226 0 1 1 1 588.36072 1175.71416 1175.70361 8.97 0.00527 0/0 0 0 20005104 HCD 30 MS2 12.12823 1441.4 110 64.9806 19194 19194 19185 QEplus033719.raw F4 1528.1 1332.3 1466.6 999 1959.4 1363.1 498 2.17 2 FALSE 0.0006294 0.009688 0.41 -250 90868 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEYDEAGPSIVHR [K].qEYDEAGPSIVHR.[K] N-Term(TMT6plex) 8 Q3UIJ3; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q3TG92; Q3UIJ3; Q9CXK3; Q61272; P62737; P68134; P68033; Q61264 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1" 0 3 3 0.8522 0 1 1 1 577.29358 1729.86618 1729.87068 -2.6 -0.0015 0/0 0 0 8203245.5 HCD 30 MS2 18.66923 742.8 110 64.9831 19195 19195 19185 QEplus033719.raw F4 855.6 476.7 693.6 833.3 833.3 764.2 170 5.48 3 FALSE 1.14E-05 2.30E-09 1.738 -250 90874 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMLPHK [R].gMLPHk.[T] N-Term(TMT6plex); K6(TMT6plex) 7 A0A1B0GS68 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Gm45713 PE=2 SV=1 A0A1B0GS68; A0A1B0GTA1; Q3TDS9; A0A1B0GSC2; P19253; A0A1B0GT00; A0A1B0GSB2 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Gm45713 PE=2 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=2 SV=1; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=4; 60S ribosomal protein L13a (Fragment) OS=Mus musculus OX=10090 GN=Rpl13a PE=3 SV=1; 60S ribosomal protein L13a OS=Mus musculus OX=10090 GN=Rpl13a PE=1 SV=1 0 3 3 0.4481 0 1 1 1 380.90375 1140.69669 1140.69636 0.29 0.00011 0/0 0 0 130826208 HCD 30 MS2 6.587037 352.2 8.925 64.9904 19197 19197 19196 QEplus033719.raw F4 306.5 284 398.7 314.6 366 443.6 159 3.08 1 FALSE 0.001421 0.02015 0.28 -250 90884 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQYESVAAK [R].qQYESVAAk.[N] N-Term(TMT6plex); K9(TMT6plex) 8 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.6841 0 1 1 1 741.42218 1481.83708 1481.83641 0.45 0.00033 0/0 0 0 96563392 HCD 30 MS2 19.34457 633.3 18.515 64.9927 19198 19198 19196 QEplus033719.raw F4 567.8 661.3 690.6 468.3 824.2 587.4 409 4.02 2 FALSE 1.14E-05 2.91E-06 1.149 -250 90893 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIAEDSDRKYEEVAR [K].hIAEDSDRkYEEVAR.[K] N-Term(TMT6plex); K9(TMT6plex) 7 P58774; A2AIM4; P58774-2 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 Q9D1R6; Q91VH3; P58774; A2AIM4; Q3SX28; P58774-2; Q61344 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1 2 4 4 0.642 0 1 1 1 569.80701 2276.2062 2276.20353 1.17 0.00067 0/0 0 0 30100812 HCD 30 MS2 26.92439 664.4 31.615 64.9994 19201 19201 19196 QEplus033719.raw F4 768.9 433.9 756.5 641.6 569.4 815.8 376 3.38 3 TRUE 1.14E-05 5.78E-11 2.042 -250 90904 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAVVGEGR [R].iAVVGEGR.[E] N-Term(TMT6plex) 7 O88342 WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3 Q3TNK2; O88342; Q9DC08; Q3TE06; Q3U136; Q9DBM8; Q80ZI9 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat domain 1 (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1 0 2 2 0.1962 0 1 1 1 515.31659 1029.6259 1029.62541 0.48 0.00025 0/0 0 0 18598524 HCD 30 MS2 38.91654 1163.1 81.985 65.004 19203 19203 19196 QEplus033719.raw F4 1184.6 914 1212.6 955.7 1375.9 1336.1 165 2.6 1 FALSE 2.26E-05 0.001075 0.656 -250 90914 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRDVILK [K].gRDVILk.[K] N-Term(TMT6plex); K7(TMT6plex) 9 E9QB01; A0A0A6YY47 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2;Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 E9QB01; P13595-3; P13595-2; A0A0A6YWU2; P13595-4; A0A0A6YY91; A0A0A6YY47; P13595; E9Q589 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2; Isoform 3 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Isoform 2 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Isoform 4 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 (Fragment) OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=3; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 1 3 3 0.1867 0 1 1 1 420.27997 1258.82535 1258.82473 0.5 0.00021 0/0 0 0 14267962 HCD 30 MS2 62.28794 648.6 47.461 65.0062 19204 19204 19196 QEplus033719.raw F4 1178.5 315.3 603.5 485 488.8 820.3 416 2.41 2 FALSE 0.0005944 0.008826 0.424 -250 90925 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGLSPANDTGAKK [R].sGLSPANDTGAkk.[K] N-Term(TMT6plex); K12(TMT6plex); K13(TMT6plex) 1 O70310 Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 O70310 Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 1 3 3 0.5351 0 1 1 1 645.05133 1933.13944 1933.13215 3.77 0.00243 0/0 0 0 3918179.5 HCD 30 MS2 0 668.2 110 65.0185 19208 19208 19207 QEplus033719.raw F4 684.9 574.3 742.5 580 727.1 700.4 407 3.42 1 FALSE 1.14E-05 1.02E-08 1.616 -250 90932 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYYEECPK [R].sYYEEcPk.[D] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 1 Q9CXD9 Leucine-rich repeat-containing protein 17 OS=Mus musculus OX=10090 GN=Lrrc17 PE=2 SV=1 Q9CXD9 Leucine-rich repeat-containing protein 17 OS=Mus musculus OX=10090 GN=Lrrc17 PE=2 SV=1 0 2 2 0.7566 0 1 1 1 767.39264 1533.778 1533.76595 7.86 0.00602 0/0 0 0 3238801.25 HCD 30 MS2 0 307.6 110 65.0211 19209 19209 19207 QEplus033719.raw F4 275.8 234.2 336.8 293.6 408.5 296.8 195 3.41 1 FALSE 1.14E-05 0.0005208 0.719 -250 90950 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YSEGYPGK [K].ySEGYPGk.[R] N-Term(TMT6plex); K8(TMT6plex) 2 Q9CZN7 "Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" Q9CZN7-2; Q9CZN7 "Isoform 2 of Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2; Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" 0 3 3 0.5318 0 1 1 1 453.58383 1358.73694 1358.73564 0.96 0.00043 0/0 0 0 15645461 HCD 30 MS2 69.74121 1155.9 56.195 65.0301 19213 19213 19207 QEplus033719.raw F4 1230.1 892.3 1240.2 1214.3 1149.6 1208.7 309 2.2 1 FALSE 0.002578 0.05064 0.14 -250 90956 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHALTSGTIK [R].eHALTSGTIk.[A] N-Term(TMT6plex); K10(TMT6plex) 4 P83940 Elongin-C OS=Mus musculus OX=10090 GN=Eloc PE=1 SV=1 P83940; A0A087WNT1; A0A087WPE4; A0A087WQE6 Elongin-C OS=Mus musculus OX=10090 GN=Eloc PE=1 SV=1; Elongin-C OS=Mus musculus OX=10090 GN=Eloc PE=1 SV=1; Elongin-C (Fragment) OS=Mus musculus OX=10090 GN=Eloc PE=1 SV=1; Elongin-C (Fragment) OS=Mus musculus OX=10090 GN=Eloc PE=1 SV=1 0 3 3 0.6542 0 1 1 1 505.63684 1514.89597 1514.89426 1.13 0.00057 0/0 0 0 15640408 HCD 30 MS2 36.11608 1103 110 65.0326 19214 19214 19207 QEplus033719.raw F4 1196.8 998.5 1122.7 1061.2 1309.8 928.9 381 4.28 1 FALSE 1.14E-05 1.13E-06 1.227 -250 90963 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVGEHVVSVRK [K].eVGEHVVSVRk.[S] N-Term(TMT6plex); K11(TMT6plex) 3 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q3UXJ8; Q8VHX6-2; Q8VHX6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flnc PE=2 SV=1; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 1 4 4 0.6585 0 1 1 1 425.00879 1697.01333 1697.01102 1.36 0.00058 0/0 0 0 14404898 HCD 30 MS2 25.79835 797.8 110 65.0351 19215 19215 19207 QEplus033719.raw F4 890 565.9 983.1 739.3 683.2 925.4 336 4.48 1 FALSE 1.14E-05 2.18E-06 1.173 -250 90991 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTLEDEAK [K].kTLEDEAk.[T] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 1 2 2 0.375 0 1 1 1 810.99286 1620.97844 1620.97755 0.55 0.00045 0/0 0 0 7413696 HCD 30 MS2 14.72851 415.2 110 65.05 19220 19220 19218 QEplus033719.raw F4 384.3 473.7 477.8 306.9 493.9 354.9 352 2.96 1 FALSE 1.14E-05 0.0003979 0.742 -250 90998 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTTIPTK [R].nTTIPTk.[QK] N-Term(TMT6plex); K7(TMT6plex) 19 Q3TEK2; B7U582; P38647 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1;Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1;Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; B7U582; Q3TH04; P63017; Q3TQ13; P38647; Q3TB63; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16; P17156 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Mus musculus OX=10090 GN=Hspa2 PE=1 SV=2" 0 2 2 0.4523 0 1 1 1 616.88483 1232.76238 1232.76146 0.74 0.00046 0/0 0 0 137413184 HCD 30 MS2 46.14023 1223.3 10.94 65.0522 19221 19221 19218 QEplus033719.raw F4 1193.8 1104.7 1398.8 1062.7 1336.7 1243.2 473 1.99 3 FALSE 0.001351 0.01911 0.289 -250 91008 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDNDENEHQLSLR [K].vDNDENEHQLSLR.[T] N-Term(TMT6plex) 9 Q5SQB7 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1 Q5SQB7; Q5SQB0; Q8BSZ3; Q5BL09; Q5U438; Q9DAY9; Q3UDA7; Q5SQB5; Q3U536 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Npm1 protein OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1 0 3 3 0.7705 0 1 1 1 599.9693 1797.89334 1797.89287 0.26 0.00016 0/0 0 0 91883280 HCD 30 MS2 12.16728 472.7 19.738 65.0545 19222 19222 19218 QEplus033719.raw F4 439.3 425.8 535.2 407.6 578.7 449.4 176 6.84 1 FALSE 1.14E-05 1.40E-13 2.539 -250 91013 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AENYDISPADR [R].aENYDISPADR.[H] N-Term(TMT6plex) 2 A0A1S6GWH5 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1 A0A1S6GWH5; Q02053 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1; Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus OX=10090 GN=Uba1 PE=1 SV=1 0 2 2 0.6781 0 1 1 1 740.36792 1479.72856 1479.7277 0.58 0.00043 0/0 0 0 45901276 HCD 30 MS2 10.33663 530.2 47.165 65.0568 19223 19223 19218 QEplus033719.raw F4 554.4 477.9 611.9 461.4 549.1 526.7 153 3.79 1 FALSE 1.14E-05 3.70E-09 1.699 -250 91035 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGLVDEK [R].gGLVDEk.[A] N-Term(TMT6plex); K7(TMT6plex) 9 Q3UIX8; A0A0J9YUM4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctbp2 PE=2 SV=1;C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1 PE=1 SV=1 O88712-2; Q3UIX8; P56546; A0A0J9YUM4; Q91YZ2; A0A0J9YU62; O88712-3; P56546-2; O88712 Isoform 2 of C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctbp2 PE=2 SV=1; C-terminal-binding protein 2 OS=Mus musculus OX=10090 GN=Ctbp2 PE=1 SV=2; C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1 PE=1 SV=1; C-terminal-binding protein 2 OS=Mus musculus OX=10090 GN=Ctbp2 PE=1 SV=1; C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1 PE=1 SV=1; Isoform 3 of C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1; Isoform 2 of C-terminal-binding protein 2 OS=Mus musculus OX=10090 GN=Ctbp2; C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1 PE=1 SV=2 0 2 2 0.3574 0 1 1 1 588.35748 1175.70769 1175.70361 3.47 0.00204 0/0 0 0 24353758 HCD 30 MS2 14.8804 1362.1 64.165 65.0636 19226 19226 19218 QEplus033719.raw F4 1414.1 1249 1383.8 936.2 1907.6 1281.7 519 2.35 2 FALSE 0.00079 0.01109 0.387 -250 91051 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QACTPMFR [K].qAcTPMFR.[E] N-Term(TMT6plex); C3(Carbamidomethyl) 2 Q9CZN7 "Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" Q9CZN7-2; Q9CZN7 "Isoform 2 of Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2; Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" 0 2 2 0.3872 0 1 1 1 620.31226 1239.61724 1239.61756 -0.27 -0.00016 0/0 0 0 11383284 HCD 30 MS2 43.46677 1356.6 110 65.0686 19228 19228 19218 QEplus033719.raw F4 1355.2 1262.5 1466.9 1203 1465.8 1386.1 116 2.35 1 FALSE 0.006404 0.1034 -0.003 -250 91059 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSCPLDCK [R].dScPLDck.[V] N-Term(TMT6plex); C3(Carbamidomethyl); C7(Carbamidomethyl); K8(TMT6plex) 3 P84104 Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3 PE=1 SV=1 P84104-2; P84104; Q9D6W4 Isoform Short of Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3; Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3 PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf3 PE=2 SV=1 0 2 2 0.4764 0 1 1 1 726.86462 1452.72197 1452.72271 -0.51 -0.00037 0/0 0 0 16253376 HCD 30 MS2 0 770.6 110 65.0759 19230 19230 19229 QEplus033719.raw F4 848.6 829.5 847.6 483.9 928 686.3 133 2.96 1 FALSE 1.14E-05 0.0007497 0.687 -250 91066 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLEATDDSPK [K].gLEATDDSPk.[Y] N-Term(TMT6plex); K10(TMT6plex) 5 Q6XMP4 Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1 Q6XMP4; Q8BGQ7; Q6PDM7; Q3TZ32; Q3UD67 "Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1" 0 2 2 0.5954 0 1 1 1 745.90881 1490.81035 1490.81026 0.06 0.00005 0/0 0 0 19631028 HCD 30 MS2 26.11723 860.6 110 65.0784 19231 19231 19229 QEplus033719.raw F4 940 773.4 949.6 731.3 950.1 819.2 388 3.88 1 FALSE 1.14E-05 1.87E-08 1.566 -250 91073 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TCDESSFCK [K].tcDESSFck.[R] N-Term(TMT6plex); C2(Carbamidomethyl); C8(Carbamidomethyl); K9(TMT6plex) 3 A1A4T2 Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1 A1A4T2; Q3UE86; Q8BHN3 Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Gal_mutarotas_2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab PE=1 SV=1 0 2 2 0.8058 0 1 1 1 796.37671 1591.74614 1591.74965 -2.2 -0.00175 0/0 0 0 19987828 HCD 30 MS2 3.984891 1254.5 110 65.0809 19232 19232 19229 QEplus033719.raw F4 1291.4 1123.5 1391.5 1013.7 1418 1288.9 54 3.45 1 FALSE 1.14E-05 7.76E-05 0.878 -250 91077 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPAPTTSGGLNK [K].qPAPTTSGGLNk.[K] N-Term(TMT6plex); K12(TMT6plex) 7 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; P27546-3; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 3 3 0.7314 0 1 1 1 543.65112 1628.93882 1628.93719 1 0.00054 0/0 0 0 15842546 HCD 30 MS2 17.07737 682.6 80.509 65.0832 19233 19233 19229 QEplus033719.raw F4 686.2 599.3 714.6 570.2 805.6 719.5 353 5.66 2 FALSE 1.14E-05 4.71E-10 1.869 -250 91083 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EESGKPGAHVTVKK [R].eESGkPGAHVTVkk.[L] N-Term(TMT6plex); K5(TMT6plex); K13(TMT6plex); K14(TMT6plex) 4 O88569 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2 O88569-3; B7ZP22; O88569; O88569-2 Isoform 3 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2; Isoform 2 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 1 5 5 0.5876 0 1 1 1 477.49542 2383.44801 2383.4479 0.05 0.00002 0/0 0 0 10880686 HCD 30 MS2 22.78404 846.5 110 65.0857 19234 19234 19229 QEplus033719.raw F4 883.2 925.5 823.4 716.9 1196.3 533.6 175 3.54 1 FALSE 1.14E-05 0.0001539 0.821 -250 91087 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VALENDDRSEEEK [R].vALENDDRSEEEk.[Y] N-Term(TMT6plex); K13(TMT6plex) 8 O70305; F6U2C2 Ataxin-2 OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1;Ataxin-2 (Fragment) OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1 O70305-3; Q3UX07; A0A286YDU2; O70305; E9QM77; O70305-2; F7B6X4; F6U2C2 Isoform 3 of Ataxin-2 OS=Mus musculus OX=10090 GN=Atxn2; LsmAD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Atxn2 PE=2 SV=1; Ataxin-2 (Fragment) OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1; Ataxin-2 OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1; Ataxin-2 OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1; Isoform 2 of Ataxin-2 OS=Mus musculus OX=10090 GN=Atxn2; Ataxin-2 (Fragment) OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1; Ataxin-2 (Fragment) OS=Mus musculus OX=10090 GN=Atxn2 PE=1 SV=1 1 3 3 0.7549 0 1 1 1 664.68158 1992.03019 1992.02858 0.8 0.00053 0/0 0 0 12904670 HCD 30 MS2 0 873.4 110 65.0882 19235 19235 19229 QEplus033719.raw F4 854.6 717.4 989.8 690 988 1000.8 289 3.06 2 FALSE 1.14E-05 1.83E-09 1.757 -250 91095 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQQEGVQK [K].lQQEGVQk.[K] N-Term(TMT6plex); K8(TMT6plex) 33 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 2 2 0.4162 0 1 1 1 694.41931 1387.83135 1387.83094 0.3 0.00021 0/0 0 0 8607216 HCD 30 MS2 45.04294 775.9 110 65.0907 19236 19236 19229 QEplus033719.raw F4 685.8 699.3 881.6 650.3 856.4 881.9 513 3.34 1 FALSE 1.14E-05 5.66E-05 0.904 -250 91105 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPAPTTSGGLNK [K].qPAPTTSGGLNk.[K] N-Term(TMT6plex); K12(TMT6plex) 7 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; P27546-3; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 2 2 0.7344 0 1 1 1 814.97253 1628.93779 1628.93719 0.37 0.0003 0/0 0 0 8214974 HCD 30 MS2 9.301248 374.2 110 65.0932 19237 19237 19229 QEplus033719.raw F4 395.8 312.2 388.9 345.4 430.3 372.9 357 3.84 2 FALSE 1.14E-05 5.04E-08 1.484 -250 91113 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEYDEAGPSIVHR [K].qEYDEAGPSIVHR.[K] N-Term(TMT6plex) 8 Q3UIJ3; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q3TG92; Q3UIJ3; Q9CXK3; Q61272; P62737; P68134; P68033; Q61264 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1" 0 2 2 0.7615 0 1 1 1 865.4397 1729.87212 1729.87068 0.83 0.00072 0/0 0 0 5468460.5 HCD 30 MS2 0 366.3 110 65.0958 19238 19238 19229 QEplus033719.raw F4 467.6 146.4 321.2 767.6 243.9 251.1 182 4.57 3 FALSE 1.14E-05 4.79E-13 2.438 -250 91137 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SESPKEPEQLRK [K].sESPkEPEQLRk.[L] N-Term(TMT6plex); K5(TMT6plex); K12(TMT6plex) 7 Q3UK83 Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1 Q3TFB1; Q3UK83; P49312; Q3U7F3; P49312-2; Q3TIK8; Q5EBP8 Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=2; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Isoform Short of Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus OX=10090 GN=Hnrnpa1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=2 SV=1; Helix-destabilizing protein OS=Mus musculus OX=10090 GN=Hnrnpa1 PE=1 SV=1 2 3 3 0.7018 0 1 1 1 705.75104 2115.23856 2115.23768 0.42 0.00029 0/0 0 0 34490412 HCD 30 MS2 8.15219 1021 110 65.1081 19242 19242 19240 QEplus033719.raw F4 992.9 1092.8 1155 661.5 1357.3 866.7 374 3.32 1 FALSE 1.14E-05 2.90E-05 0.959 -250 91150 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLEATDDSPK [K].gLEATDDSPk.[Y] N-Term(TMT6plex); K10(TMT6plex) 5 Q6XMP4 Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1 Q6XMP4; Q8BGQ7; Q6PDM7; Q3TZ32; Q3UD67 "Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1" 0 3 3 0.6751 0 1 1 1 497.60864 1490.81137 1490.81026 0.75 0.00037 0/0 0 0 26529372 HCD 30 MS2 41.91162 822.5 58.244 65.1126 19244 19244 19240 QEplus033719.raw F4 948.3 719.1 906.1 586.6 939.4 835.5 390 4.34 1 FALSE 1.14E-05 1.45E-06 1.207 -250 91156 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KEPLAAGK [K].kEPLAAGk.[L] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 2 B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 P14873; B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=1 SV=2; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 1 3 3 0.3946 0 1 1 1 500.99561 1500.97226 1500.97168 0.39 0.0002 0/0 0 0 13520828 HCD 30 MS2 61.3493 1387 74.954 65.1149 19245 19245 19240 QEplus033719.raw F4 1676 1016 1449.1 1277 1448.8 1455.3 148 2.61 1 FALSE 2.26E-05 0.001112 0.653 -250 91174 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HCECSTDEVNSEDMDAYCR [R].hcEcSTDEVNSEDMDAYcR.[K] N-Term(TMT6plex); C2(Carbamidomethyl); C4(Carbamidomethyl); C18(Carbamidomethyl) 2 P09055 Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 P09055-2; P09055 Isoform 2 of Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1; Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 0 3 3 1 0 1 1 1 869.67407 2607.00766 2607.00535 0.89 0.00077 0/0 0 0 10235853 HCD 30 MS2 0 48.3 110 65.1224 19248 19248 19240 QEplus033719.raw F4 59.8 38.7 52.2 44.1 49.7 45.3 1 8.43 1 FALSE 1.14E-05 6.31E-16 3.286 -250 91175 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLADQAEAR [K].lLADQAEAR.[R] N-Term(TMT6plex) 2 Q5I0T8 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 Q5I0T8; A2A547 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1; Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 0 2 2 0.5809 0 1 1 1 608.34821 1215.68913 1215.68947 -0.27 -0.00017 0/0 0 0 9149064 HCD 30 MS2 13.38542 967.7 110 65.1249 19249 19249 19240 QEplus033719.raw F4 1018.1 786.9 1063.2 844.4 989.8 1103.9 387 3.77 1 FALSE 1.14E-05 6.34E-06 1.085 -250 91191 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQLEEAEEEAQR [K].rQLEEAEEEAQR.[A] N-Term(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q7TQJ6; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 3 3 0.8158 0 1 1 1 572.96234 1716.87247 1716.87141 0.62 0.00035 0/0 0 0 86067464 HCD 30 MS2 10.63203 271.5 20.014 65.1347 19252 19252 19251 QEplus033719.raw F4 268.5 238.8 307.6 212.6 319.3 282.1 202 6.46 1 FALSE 1.14E-05 5.72E-14 2.613 -250 91194 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVTIQSK [R].sVTIQSk.[K] N-Term(TMT6plex); K7(TMT6plex) 6 Q9D7N3 "28S ribosomal protein S9, mitochondrial OS=Mus musculus OX=10090 GN=Mrps9 PE=1 SV=3" Q5XJX8; Q9ER89; Q9D7N3; A0A1S6GWG5; A0A0J9YU02; Q3UMV5 "Mrps9 protein (Fragment) OS=Mus musculus OX=10090 GN=Mrps9 PE=2 SV=1; Muscle protein 637 OS=Mus musculus OX=10090 GN=Mrps9 PE=2 SV=1; 28S ribosomal protein S9, mitochondrial OS=Mus musculus OX=10090 GN=Mrps9 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mrps9 PE=2 SV=1; 28S ribosomal protein S9, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Mrps9 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mrps9 PE=2 SV=1" 0 2 2 0.2379 0 1 1 1 610.88391 1220.76055 1220.76146 -0.75 -0.00046 0/0 0 0 6105022.5 HCD 30 MS2 70.76721 1202.7 110 65.1372 19253 19253 19251 QEplus033719.raw F4 1202.5 1093.1 1271.1 1063.4 1377 1208.8 222 2.48 1 FALSE 0.0002218 0.00465 0.51 -250 91204 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YSEGYPGK [K].ySEGYPGk.[R] N-Term(TMT6plex); K8(TMT6plex) 2 Q9CZN7 "Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" Q9CZN7-2; Q9CZN7 "Isoform 2 of Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2; Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" 0 3 3 0.6054 0 1 1 1 453.58142 1358.72971 1358.73564 -4.36 -0.00198 0/0 0 0 16840418 HCD 30 MS2 47.21499 772.4 41.651 65.1395 19254 19254 19251 QEplus033719.raw F4 816.3 666.1 823.7 688.5 843.8 795.9 284 2.23 1 FALSE 0.005708 0.09579 0.018 -250 91209 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSCPLDCK [R].dScPLDck.[V] N-Term(TMT6plex); C3(Carbamidomethyl); C7(Carbamidomethyl); K8(TMT6plex) 3 P84104 Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3 PE=1 SV=1 P84104-2; P84104; Q9D6W4 Isoform Short of Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3; Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3 PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf3 PE=2 SV=1 0 3 3 0.5864 0 1 1 1 484.91306 1452.72461 1452.72271 1.31 0.00064 0/0 0 0 16442644 HCD 30 MS2 54.96008 912 75.795 65.1417 19255 19255 19251 QEplus033719.raw F4 1038.1 863.8 951.8 684.5 1102.3 831.2 134 2.95 1 FALSE 0.0004091 0.007404 0.45 -250 91222 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESLSEEEAQK [R].eSLSEEEAQk.[M] N-Term(TMT6plex); K10(TMT6plex) 6 Q99MR6 Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1 Q99MR6-3; Q99MR6; Q99MR6-4; A0A0G2JDF8; Q99MR6-2; A0A0G2JG65 Isoform C of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1; Isoform D of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Arsenite-resistance protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1; Isoform B of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Arsenite-resistance protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1 0 2 2 0.6753 0 1 1 1 804.42957 1607.85185 1607.85285 -0.62 -0.0005 0/0 0 0 9602986 HCD 30 MS2 45.78968 601.5 110 65.149 19258 19258 19251 QEplus033719.raw F4 612.1 461.6 647.6 634.3 546.3 707.3 333 3.88 1 FALSE 1.14E-05 2.44E-08 1.544 -250 91227 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QKAEDDETLQAK [K].qkAEDDETLQAk.[K] N-Term(TMT6plex); K2(TMT6plex); K12(TMT6plex) 8 O08784 Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 H3BK88; H3BIX0; Q05BH6; F6R3V4; O08784; Q7TPZ2; Q6PFZ6; H3BL37 Treacle protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=8; Treacle protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Tcof1 protein OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 1 3 3 0.6067 0 1 1 1 688.39185 2063.16098 2063.15876 1.08 0.00074 0/0 0 0 8906750 HCD 30 MS2 36.70806 429.3 110 65.1515 19259 19259 19251 QEplus033719.raw F4 441.5 424.5 452.5 315.5 494 448 455 5.11 1 FALSE 1.14E-05 2.51E-12 2.301 -250 91234 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDSTEPPYSQKR [K].mDSTEPPYSQkR.[Y] N-Term(TMT6plex); K11(TMT6plex) 6 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 1 3 3 0.5662 0 1 1 1 633.00159 1896.99021 1896.98897 0.65 0.00041 0/0 0 0 8182581.5 HCD 30 MS2 65.139 110 65.154 19260 19260 19251 QEplus033719.raw F4 368 2.19 1 FALSE 1.14E-05 1.38E-05 1.021 -250 91241 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADRDAAAVKPTENNEEESASK [R].aDRDAAAVkPTENNEEESASk.[Q] N-Term(TMT6plex); K9(TMT6plex); K21(TMT6plex) 1 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 1 4 4 0.7828 0 1 1 1 730.63727 2919.52724 2919.52627 0.33 0.00024 0/0 0 0 6578798.5 HCD 30 MS2 20.2335 257.7 110 65.1566 19261 19261 19251 QEplus033719.raw F4 273.9 194.7 294.3 202.7 281.8 299.1 405 6.86 1 FALSE 1.14E-05 6.31E-16 3.757 -250 91253 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDPSVLHTEEMR [R].qDPSVLHTEEMR.[F] N-Term(TMT6plex) 6 Q3U9V1 TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1 E9Q1X9; F8WJK8; Q3U9V1; Q3U8D2; Q3U3N7; Q99L47 Hsc70-interacting protein (Fragment) OS=Mus musculus OX=10090 GN=St13 PE=1 SV=8; Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1 0 2 2 0.7361 0 1 1 1 835.92249 1670.83769 1670.83694 0.45 0.00038 0/0 0 0 4907670 HCD 30 MS2 0 244.2 110 65.1664 19264 19264 19262 QEplus033719.raw F4 248.8 210.9 267.8 229.3 278.4 229.8 173 4.13 1 FALSE 1.14E-05 3.24E-09 1.71 -250 91273 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGVYPEK [R].aGVYPEk.[D] N-Term(TMT6plex); K7(TMT6plex) 9 Q3TCR7; P39054 Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1;Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2 Q3TCR7; P39054; Q91Z39; P39054-2; G3X9G4; F8WIV5; Q3T9X3; Q3TBU6; G3UZZ3 Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=2 SV=1; Isoform 2 of Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=2 SV=1; Dynamin GTPase (Fragment) OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1 0 2 2 0.335 0 1 1 1 611.36511 1221.72295 1221.72434 -1.14 -0.0007 0/0 0 0 15320459 HCD 30 MS2 54.045 1379.1 96.806 65.1732 19267 19267 19262 QEplus033719.raw F4 1379.1 1267.1 1464.4 1211.8 1602.1 1349.9 321 2.06 2 FALSE 0.001343 0.0189 0.291 -250 91283 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEPVSVQK [K].sEPVSVQk.[GK] N-Term(TMT6plex); K8(TMT6plex) 4 Q8CI51 PDZ and LIM domain protein 5 OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=4 Q8CI51-2; Q9CRA2; Q8CI51; Q2Q7P0 Isoform 2 of PDZ and LIM domain protein 5 OS=Mus musculus OX=10090 GN=Pdlim5; PDZ and LIM domain protein 5 OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=1; PDZ and LIM domain protein 5 OS=Mus musculus OX=10090 GN=Pdlim5 PE=1 SV=4; ENH1 OS=Mus musculus OX=10090 GN=Pdlim5 PE=2 SV=1 0 2 2 0.5863 0 1 1 1 666.40125 1331.79521 1331.79349 1.3 0.00086 0/0 0 0 14921852 HCD 30 MS2 0 864 110 65.1757 19268 19268 19262 QEplus033719.raw F4 906 850.4 930.2 578.6 1102.1 816.6 523 3.07 1 FALSE 1.14E-05 9.50E-05 0.861 -250 91289 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NELVQK [K].nELVQk.[FA] N-Term(TMT6plex); K6(TMT6plex) 17 P63101 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 A0A087WQC5; A0A087WR62; Q9QXJ1; A0A087WPS7; D3YW45; A0A1B0GT76; Q80Y77; A0A0R4J2C6; A0A0R4J2C1; A0A087WPI2; A0A2I3BQ03; Q8BWN0; D3YXN6; D3YXF4; Q9QXJ1-2; P63101; Q8R1Y7 Amyloid-beta A4 precursor protein-binding family B member 1 OS=Mus musculus OX=10090 GN=Apbb1 PE=1 SV=1; Amyloid-beta A4 precursor protein-binding family B member 1 OS=Mus musculus OX=10090 GN=Apbb1 PE=1 SV=1; Amyloid-beta A4 precursor protein-binding family B member 1 OS=Mus musculus OX=10090 GN=Apbb1 PE=1 SV=3; Amyloid-beta A4 precursor protein-binding family B member 1 OS=Mus musculus OX=10090 GN=Apbb1 PE=1 SV=1; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; Amyloid-beta A4 precursor protein-binding family B member 1 (Fragment) OS=Mus musculus OX=10090 GN=Apbb1 PE=1 SV=1; Apbb1 protein OS=Mus musculus OX=10090 GN=Apbb1 PE=2 SV=1; Amyloid-beta A4 precursor protein-binding family B member 1 OS=Mus musculus OX=10090 GN=Apbb1 PE=1 SV=1; Amyloid-beta A4 precursor protein-binding family B member 1 OS=Mus musculus OX=10090 GN=Apbb1 PE=1 SV=1; Amyloid-beta A4 precursor protein-binding family B member 1 OS=Mus musculus OX=10090 GN=Apbb1 PE=1 SV=1; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; 14_3_3 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=8; Isoform 2 of Amyloid-beta A4 precursor protein-binding family B member 1 OS=Mus musculus OX=10090 GN=Apbb1; 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; Apbb1 protein (Fragment) OS=Mus musculus OX=10090 GN=Apbb1 PE=2 SV=1 0 3 3 0.1319 0 1 1 1 396.91656 1188.73514 1188.73524 -0.09 -0.00003 0/0 0 0 13744020 HCD 30 MS2 26.86096 527.5 61.939 65.178 19269 19269 19262 QEplus033719.raw F4 494.4 422.5 602.6 437.3 605 603.4 558 2.35 1 FALSE 0.003624 0.06952 0.089 -250 91296 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIGDLGAR [R].sIGDLGAR.[H] N-Term(TMT6plex) 3 Q9CQT1 Methylthioribose-1-phosphate isomerase OS=Mus musculus OX=10090 GN=Mri1 PE=1 SV=1 F8WI95; F6YY88; Q9CQT1 Methylthioribose-1-phosphate isomerase (Fragment) OS=Mus musculus OX=10090 GN=Mri1 PE=1 SV=1; Methylthioribose-1-phosphate isomerase (Fragment) OS=Mus musculus OX=10090 GN=Mri1 PE=1 SV=1; Methylthioribose-1-phosphate isomerase OS=Mus musculus OX=10090 GN=Mri1 PE=1 SV=1 0 2 2 0.3303 0 1 1 1 509.29892 1017.59056 1017.58902 1.51 0.00077 0/0 0 0 10944586 HCD 30 MS2 58.5013 1282.9 110 65.1804 19270 19270 19262 QEplus033719.raw F4 1339.6 1002.4 1310.9 1235.5 1385.8 1423.2 337 2.21 1 FALSE 0.001658 0.0272 0.231 -250 91303 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AENYDISPADR [R].aENYDISPADR.[H] N-Term(TMT6plex) 2 A0A1S6GWH5 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1 A0A1S6GWH5; Q02053 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1; Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus OX=10090 GN=Uba1 PE=1 SV=1 0 3 3 0.6832 0 1 1 1 493.91479 1479.72983 1479.7277 1.44 0.00071 0/0 0 0 9927123 HCD 30 MS2 30.78579 821.6 110 65.1829 19271 19271 19262 QEplus033719.raw F4 905.9 689.4 936.8 672.5 863.1 861.8 156 4.04 1 FALSE 1.14E-05 9.57E-06 1.051 -250 91310 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IEQQVSK [K].iEQQVSk.[A] N-Term(TMT6plex); K7(TMT6plex) 6 Q69ZN1 MKIAA1252 protein (Fragment) OS=Mus musculus OX=10090 GN=Sgpl1 PE=2 SV=1 Q69ZN1; Q8R0X7; Q4FK38; D3YZT4; D6REF7; Q3UDJ2 MKIAA1252 protein (Fragment) OS=Mus musculus OX=10090 GN=Sgpl1 PE=2 SV=1; Sphingosine-1-phosphate lyase 1 OS=Mus musculus OX=10090 GN=Sgpl1 PE=1 SV=1; Sgpl1 protein OS=Mus musculus OX=10090 GN=Sgpl1 PE=2 SV=1; Sphingosine-1-phosphate lyase 1 (Fragment) OS=Mus musculus OX=10090 GN=Sgpl1 PE=1 SV=1; Sphingosine-1-phosphate lyase 1 OS=Mus musculus OX=10090 GN=Sgpl1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Sgpl1 PE=2 SV=1 0 2 2 0.25 0 1 1 1 645.3949 1289.78252 1289.78292 -0.31 -0.0002 0/0 0 0 3344930 HCD 30 MS2 73.72224 830.8 110 65.1855 19272 19272 19262 QEplus033719.raw F4 840.9 686.7 849.3 738.3 987.9 881.9 553 2.6 1 FALSE 0.00116 0.01557 0.326 -250 91320 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YSEGYPGK [K].ySEGYPGk.[R] N-Term(TMT6plex); K8(TMT6plex) 2 Q9CZN7 "Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" Q9CZN7-2; Q9CZN7 "Isoform 2 of Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2; Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" 0 2 2 0.3313 0 1 1 1 679.87097 1358.73467 1358.73564 -0.71 -0.00049 0/0 0 0 29266930 HCD 30 MS2 54.85318 1029.9 28.173 65.1928 19274 19274 19273 QEplus033719.raw F4 1029.1 1065 1143 819.2 1261.8 861.5 318 1.66 1 FALSE 0.0009633 0.01308 0.358 -250 91328 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPLGSSTAAPQRPIATQR [K].kPLGSSTAAPQRPIATQR.[T] N-Term(TMT6plex); K1(TMT6plex) 1 Q3U4H0 APC-binding protein EB1 OS=Mus musculus OX=10090 GN=Mapre1 PE=1 SV=1 Q3U4H0 APC-binding protein EB1 OS=Mus musculus OX=10090 GN=Mapre1 PE=1 SV=1 0 4 4 0.4913 0 1 1 1 585.09961 2337.37661 2337.37668 -0.03 -0.00002 0/0 0 0 29195030 HCD 30 MS2 44.444 649.1 50.911 65.195 19275 19275 19273 QEplus033719.raw F4 707.9 503.1 672.3 551.2 795.9 663.9 321 3.46 1 FALSE 0.0006869 0.01007 0.403 -250 91364 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GADINAPDK [K].gADINAPDk.[H] N-Term(TMT6plex); K9(TMT6plex) 2 P62774 Myotrophin OS=Mus musculus OX=10090 GN=Mtpn PE=1 SV=2 A0A0J9YV46; P62774 Myotrophin (Fragment) OS=Mus musculus OX=10090 GN=Mtpn PE=1 SV=1; Myotrophin OS=Mus musculus OX=10090 GN=Mtpn PE=1 SV=2 0 3 3 0.6496 0 1 1 1 453.59613 1358.77384 1358.768 4.3 0.00195 0/0 0 0 26075988 HCD 30 MS2 39.43889 759.3 34.227 65.2041 19279 19279 19273 QEplus033719.raw F4 795.3 676.8 792.1 582.9 948.4 760.1 373 2.54 1 FALSE 2.26E-05 0.001021 0.66 -250 91369 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYHNVGLSK [K].kYHNVGLSk.[C] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 9 Q60668; G5E8G0 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2;Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1 Q60668; F6ZV59; G5E8G0; Q60668-4; F7A465; G3X9W0; Q60668-2; Q60668-3; F6SHF3 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein D0 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1; Isoform 4 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd; Heterogeneous nuclear ribonucleoprotein D0 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd; Isoform 3 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd; Heterogeneous nuclear ribonucleoprotein D0 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1 1 4 4 0.5478 0 1 1 1 434.02344 1733.07192 1733.0677 2.43 0.00105 0/0 0 0 19735266 HCD 30 MS2 35.35659 679.6 53.327 65.2063 19280 19280 19273 QEplus033719.raw F4 701.3 668.3 731.1 598.5 800.4 578.2 334 3.56 2 FALSE 1.14E-05 1.56E-05 1.011 -250 91377 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YADEEIPR [K].yADEEIPR.[S] N-Term(TMT6plex) 1 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 0 2 2 0.7656 0 1 1 1 611.3197 1221.63213 1221.63128 0.69 0.00042 0/0 0 0 14672281 HCD 30 MS2 51.36911 1330.6 80.893 65.2086 19281 19281 19273 QEplus033719.raw F4 1308.8 1265.6 1374.7 1167 1565.4 1302 226 2.73 1 FALSE 1.14E-05 0.0009416 0.667 -250 91381 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAFEETGK [K].sAFEETGk.[T] N-Term(TMT6plex); K8(TMT6plex) 2 Q9DAU1 Protein canopy homolog 3 OS=Mus musculus OX=10090 GN=Cnpy3 PE=1 SV=1 B0V2V1; Q9DAU1 Protein canopy homolog 3 OS=Mus musculus OX=10090 GN=Cnpy3 PE=1 SV=1; Protein canopy homolog 3 OS=Mus musculus OX=10090 GN=Cnpy3 PE=1 SV=1 0 2 2 0.5903 0 1 1 1 663.87073 1326.73418 1326.73055 2.73 0.00181 0/0 0 0 11481070 HCD 30 MS2 46.51138 1139.4 110 65.2111 19282 19282 19273 QEplus033719.raw F4 1091.5 1035.3 1141.7 814.7 1669.7 1083.5 306 3.1 1 FALSE 0.002088 0.03905 0.178 -250 91415 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSTSQAIFR [R].tSTSQAIFR.[L] N-Term(TMT6plex) 5 Q922B2 "Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars1 PE=1 SV=2" Q922B2; Q3TMC5; Q3TF87; Q3UJQ3; Q8BK18 "Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars1 PE=1 SV=2; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1" 0 2 2 0.5588 0 1 1 1 620.34863 1239.68999 1239.68947 0.42 0.00026 0/0 0 0 68177384 HCD 30 MS2 56.43358 1095.5 20.826 65.2257 19287 19287 19284 QEplus033719.raw F4 1080.2 964 1179.8 979.4 1182.5 1187 317 2.38 1 FALSE 1.14E-05 0.0001907 0.803 -250 91427 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTFDSAVAK [K].rTFDSAVAk.[A] N-Term(TMT6plex); K9(TMT6plex) 12 Q8CAQ8; A0A0U1RP81 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1;MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q3U7N2; Q8CAQ8; E9QAY6; Q8CAQ8-2; A0A0U1RP81; Q3TVZ5; Q2YDW0; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1 1 3 3 0.3369 0 1 1 1 484.9577 1452.85855 1452.85748 0.74 0.00036 0/0 0 0 30260248 HCD 30 MS2 58.6333 961.1 39.688 65.2302 19289 19289 19284 QEplus033719.raw F4 988.4 870.4 1071.5 835 1027.1 973.9 350 3.77 2 FALSE 1.14E-05 6.39E-07 1.274 -250 91440 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSQVRPVSTVTPGSSGK [K].sSQVRPVSTVTPGSSGk.[G] N-Term(TMT6plex); K17(TMT6plex) 7 O08784 Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 H3BIX0; Q05BH6; F6R3V4; O08784; Q7TPZ2; Q6PFZ6; H3BL37 Treacle protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Tcof1 protein OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 0 3 3 0.7422 0 1 1 1 711.40851 2132.21097 2132.20755 1.6 0.00114 0/0 0 0 10290317 HCD 30 MS2 8.771967 527.8 110 65.2373 19292 19292 19284 QEplus033719.raw F4 522.4 527 606.7 399 598.1 513.5 426 4.5 1 FALSE 1.14E-05 1.73E-13 2.521 -250 91447 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPGGWVEK [R].rPGGWVEk.[E] N-Term(TMT6plex); K8(TMT6plex) 5 Q8VDN2 Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1 Q3TXF9; Q8VDN2; Q8R3M4; Q8K2R2; Q3UF49 Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Cation_ATPase_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1 0 3 3 0.4 0 1 1 1 462.94647 1386.82486 1386.82579 -0.67 -0.00031 0/0 0 0 10560681 HCD 30 MS2 12.97909 1035.3 110 65.2398 19293 19293 19284 QEplus033719.raw F4 1254.2 739.9 1111.5 1000.4 931.1 1174.9 358 2.85 1 FALSE 0.0002814 0.005757 0.484 -250 91462 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGADFAK [K].dGADFAk.[W] N-Term(TMT6plex); K7(TMT6plex) 10 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 A0A0U1RPT5; Q9CPQ9; D3YWI1; A0A0U1RPN8; P05063; A6ZI46; D3Z510; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase C OS=Mus musculus OX=10090 GN=Aldoc PE=1 SV=4; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=2; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 0 2 2 0.5852 0 1 1 1 591.33228 1181.65727 1181.65666 0.52 0.00031 0/0 0 0 89926344 HCD 30 MS2 4.583952 1050.9 14.838 65.2496 19296 19296 19295 QEplus033719.raw F4 1132.6 562.1 1033.9 1298.5 802.6 1475.8 259 2.7 1 FALSE 0.0008718 0.01211 0.372 -250 91466 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVEVLTNQR [R].qVEVLTNQR.[A] N-Term(TMT6plex) 3 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; Q9JJY2; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin (Fragment) OS=Mus musculus OX=10090 GN=des PE=4 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 2 2 0.6257 0 1 1 1 658.38037 1315.75347 1315.75313 0.26 0.00017 0/0 0 0 29696544 HCD 30 MS2 3.939369 727.1 105.068 65.252 19297 19297 19295 QEplus033719.raw F4 784.2 333.4 671.3 1029.8 447.5 1096.2 420 3.34 1 FALSE 1.14E-05 3.35E-05 0.948 -250 91491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQNSLALHK [K].gQNSLALHk.[V] N-Term(TMT6plex); K9(TMT6plex) 3 Q9CXY0 Small monomeric GTPase OS=Mus musculus OX=10090 GN=Rala PE=2 SV=1 A0A1Y7VL93; Q9CXY0; P63321 Small monomeric GTPase (Fragment) OS=Mus musculus OX=10090 GN=Rala PE=1 SV=1; Small monomeric GTPase OS=Mus musculus OX=10090 GN=Rala PE=2 SV=1; Ras-related protein Ral-A OS=Mus musculus OX=10090 GN=Rala PE=1 SV=1 0 3 3 0.6585 0 1 1 1 475.95749 1425.85791 1425.85782 0.07 0.00003 0/0 0 0 17512312 HCD 30 MS2 0 1076.6 69.783 65.2588 19300 19300 19295 QEplus033719.raw F4 1225.8 703.9 980.4 874.2 1233.4 1442 284 3.66 1 FALSE 1.14E-05 7.93E-05 0.876 -250 91495 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLETPSCK [K].nLETPSck.[N] N-Term(TMT6plex); C7(Carbamidomethyl); K8(TMT6plex) 2 Q9WTP6 "Adenylate kinase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ak2 PE=1 SV=5" Q9WTP6-2; Q9WTP6 "Isoform 2 of Adenylate kinase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ak2; Adenylate kinase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ak2 PE=1 SV=5" 0 2 2 0.4853 0 1 1 1 703.88861 1406.76995 1406.77137 -1.01 -0.00071 0/0 0 0 20271990 HCD 30 MS2 28.1747 1043 110 65.2613 19301 19301 19295 QEplus033719.raw F4 1115.5 919.4 1121.6 865.8 1141.9 1093.7 381 3.07 1 FALSE 0.0002719 0.005407 0.492 -250 91502 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQGLPTQK [K].aQGLPTQk.[A] N-Term(TMT6plex); K8(TMT6plex) 6 A0A286YDA2 Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1 A0A286YDA2; A0A286YDT3; A0A286YDV7; E9Q5C9; A0A286YCD1; E9Q5C9-2 Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 (Fragment) OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 (Fragment) OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Isoform 2 of Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 0 2 2 0.4591 0 1 1 1 650.9035 1300.79973 1300.79891 0.63 0.00041 0/0 0 0 19165096 HCD 30 MS2 32.41973 1169.3 110 65.2638 19302 19302 19295 QEplus033719.raw F4 1233 1021.3 1257.9 860.5 1408.4 1234.6 313 2.57 1 FALSE 0.0002218 0.00458 0.512 -250 91511 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVDFSK [K].rVDFSk.[V] N-Term(TMT6plex); K6(TMT6plex) 2 Q3TQP7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Acat1 PE=2 SV=1 Q3TQP7; Q8QZT1 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Acat1 PE=2 SV=1; Acetyl-CoA acetyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Acat1 PE=1 SV=1" 1 3 3 0.4648 0 1 1 1 403.91696 1209.73633 1209.73558 0.62 0.00025 0/0 0 0 17539952 HCD 30 MS2 4.95646 819.3 63.518 65.266 19303 19303 19295 QEplus033719.raw F4 903.9 583.1 849.9 936.5 724 918.4 238 2.84 1 FALSE 0.001248 0.01707 0.309 -250 91519 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CGDSVYAAEK [R].cGDSVYAAEk.[I] N-Term(TMT6plex); C1(Carbamidomethyl); K10(TMT6plex) 5 Q71V27 Smooth muscle LIM protein OS=Mus musculus OX=10090 GN=Csrp2 PE=2 SV=1 A0A1W2P758; Q71V27; A0A1W2P845; Q6QMT3; P97314 Cysteine and glycine-rich protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Csrp2 PE=1 SV=1; Smooth muscle LIM protein OS=Mus musculus OX=10090 GN=Csrp2 PE=2 SV=1; Cysteine and glycine-rich protein 2 OS=Mus musculus OX=10090 GN=Csrp2 PE=1 SV=1; CSRP2 (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Cysteine and glycine-rich protein 2 OS=Mus musculus OX=10090 GN=Csrp2 PE=1 SV=3 0 2 2 0.6841 0 1 1 1 779.40277 1557.79827 1557.79831 -0.03 -0.00002 0/0 0 0 12786633 HCD 30 MS2 7.160639 622.8 110 65.2686 19304 19304 19295 QEplus033719.raw F4 663.4 530.2 534.6 508.4 956.9 543 196 3.45 1 FALSE 1.14E-05 3.98E-08 1.503 -250 91524 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQDIQCGLQSR [R].aQDIQcGLQSR.[H] N-Term(TMT6plex); C6(Carbamidomethyl) 2 Q9CQ48 NudC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nudcd2 PE=1 SV=1 E0CYQ2; Q9CQ48 NudC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nudcd2 PE=1 SV=1; NudC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nudcd2 PE=1 SV=1 0 2 2 0.624 0 1 1 1 752.89081 1504.77434 1504.77394 0.26 0.0002 0/0 0 0 10690292 HCD 30 MS2 0 370.7 110 65.2711 19305 19305 19295 QEplus033719.raw F4 352.1 327.2 420.1 301.8 426.3 396.6 245 3.75 1 FALSE 1.14E-05 1.53E-08 1.582 -250 91532 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVCDIPPR [K].tAVcDIPPR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 9 Q7TMM9; P99024; P68372; Q9CWF2 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1 Q7TMM9; Q9D6F9; Q62363; Q80ZV2; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2 "Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Beta-tubulin gene M-beta-2, 3' end (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1" 0 2 2 0.6431 0 1 1 1 629.34473 1257.68218 1257.68227 -0.08 -0.00005 0/0 0 0 90023072 HCD 30 MS2 10.4186 652.8 26.382 65.2784 19307 19307 19306 QEplus033719.raw F4 662.7 597 722.2 463.5 839.8 631.3 224 2.97 4 FALSE 1.14E-05 0.0005665 0.712 -250 91540 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTLEDEAK [K].kTLEDEAk.[T] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 1 3 3 0.4006 0 1 1 1 540.99786 1620.97904 1620.97755 0.92 0.0005 0/0 0 0 46273792 HCD 30 MS2 10.26202 1034.7 36.805 65.2807 19308 19308 19306 QEplus033719.raw F4 900.2 1090.3 1193.3 802.4 1292.9 929.2 372 3.32 1 FALSE 1.14E-05 1.46E-05 1.016 -250 91548 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVPTSDK [K].mVPTSDk.[G] N-Term(TMT6plex); K7(TMT6plex) 14 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q8C153; P58252; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3UZ14; Q3TK17; Q3TLB1; Q3TWX1; Q3TX47 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 0 2 2 0.4718 0 1 1 1 618.35754 1235.70781 1235.70698 0.67 0.00042 0/0 0 0 363370848 HCD 30 MS2 17.13977 1089.9 5.477 65.283 19309 19309 19306 QEplus033719.raw F4 1079.3 841.5 1205.9 896 1272.1 1244.4 508 2.48 1 FALSE 0.001083 0.01403 0.345 -250 91558 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GADINAPDK [K].gADINAPDk.[H] N-Term(TMT6plex); K9(TMT6plex) 2 P62774 Myotrophin OS=Mus musculus OX=10090 GN=Mtpn PE=1 SV=2 A0A0J9YV46; P62774 Myotrophin (Fragment) OS=Mus musculus OX=10090 GN=Mtpn PE=1 SV=1; Myotrophin OS=Mus musculus OX=10090 GN=Mtpn PE=1 SV=2 0 2 2 0.6193 0 1 1 1 679.88989 1358.77251 1358.768 3.32 0.00225 0/0 0 0 81408576 HCD 30 MS2 5.171205 868 21.088 65.2852 19310 19310 19306 QEplus033719.raw F4 869.9 893.1 953.2 581.8 1185 725.2 383 3.52 1 FALSE 1.14E-05 5.23E-06 1.101 -250 91562 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATGDWK [K].aTGDWk.[G] N-Term(TMT6plex); K6(TMT6plex) 4 Q5BLK0; Q8C2K0 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=1 SV=1;60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1 Q6DI58; Q3TIQ2; Q5BLK0; Q8C2K0 Rpl12 protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1; 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1; 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=1 SV=1; 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1 0 2 2 0.3744 0 1 1 1 568.32996 1135.65264 1135.65118 1.28 0.00073 0/0 0 0 78353648 HCD 30 MS2 17.835 1232.7 17.687 65.2875 19311 19311 19306 QEplus033719.raw F4 1211.3 1061.8 1276.8 1058.8 1500.2 1287.2 260 2.03 2 FALSE 0.00718 0.1127 -0.026 -250 91581 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYCVTANSK [K].dYcVTANSk.[L] N-Term(TMT6plex); C3(Carbamidomethyl); K9(TMT6plex) 13 A0A1B0GSX0 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1 A0A1B0GQX5; A0A1B0GT41; Q3TI99; D3YZQ9; Q3THB4; Q3UDU4; Q99K20; A0A1B0GSR9; Q3TCI7; Q6NXW3; A0A1B0GSX0; A0A1B0GSL7; P06151 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=2; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; Ldha protein OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3 0 3 3 0.6346 0 1 1 1 505.93463 1515.78934 1515.78775 1.05 0.00053 0/0 0 0 23746464 HCD 30 MS2 44.40369 1288.2 68.73 65.292 19313 19313 19306 QEplus033719.raw F4 1401.2 1065.3 1268.9 1250.7 1469.2 1274.1 222 3.64 1 FALSE 0.0002218 0.004715 0.508 -250 91591 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPPGTAGIPGAR [R].gPPGTAGIPGAR.[G] N-Term(TMT6plex) 7 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; A0A087WPS3; Q3TVI5 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen alpha-1(III) chain (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 2 2 0.7214 0 1 1 1 640.36975 1279.73223 1279.732 0.18 0.00011 0/0 0 0 21278802 HCD 30 MS2 0 1116.8 110 65.2945 19314 19314 19306 QEplus033719.raw F4 965.9 1441.5 1357.5 554.5 1101.3 1279.8 479 3.23 1 FALSE 1.14E-05 3.62E-06 1.131 -250 91598 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYCVTANSK [K].dYcVTANSk.[L] N-Term(TMT6plex); C3(Carbamidomethyl); K9(TMT6plex) 13 A0A1B0GSX0 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1 A0A1B0GQX5; A0A1B0GT41; Q3TI99; D3YZQ9; Q3THB4; Q3UDU4; Q99K20; A0A1B0GSR9; Q3TCI7; Q6NXW3; A0A1B0GSX0; A0A1B0GSL7; P06151 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=2; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; Ldha protein OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3 0 2 2 0.67 0 1 1 1 758.39728 1515.78728 1515.78775 -0.31 -0.00024 0/0 0 0 20688806 HCD 30 MS2 0 1222 110 65.2971 19315 19315 19306 QEplus033719.raw F4 1443.7 979.3 1194.2 1334.1 1250.5 1130.4 216 4.06 1 FALSE 1.14E-05 7.30E-06 1.073 -250 91607 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETEGDVTSVK [K].eTEGDVTSVk.[D] N-Term(TMT6plex); K10(TMT6plex) 7 Q6A0F1 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1 Q9CS06; Q8BVY8; Q3UKQ2; Q6A0F1; H3BL49; P42932; Q9WVS5 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1; T-complex protein 1 subunit theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=3; CCT-theta OS=Mus musculus OX=10090 GN=Cctq PE=3 SV=1 0 2 2 0.6842 0 1 1 1 761.92175 1522.83623 1522.83647 -0.16 -0.00012 0/0 0 0 13506435 HCD 30 MS2 0 857.7 110 65.2996 19316 19316 19306 QEplus033719.raw F4 953.7 734.1 914.1 694.2 907.8 942.4 366 4.37 1 FALSE 1.14E-05 3.13E-08 1.523 -250 91613 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IEGDVK [K].iEGDVk.[G] N-Term(TMT6plex); K6(TMT6plex) 6 E9Q616; Q6UIL4 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1;AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1 A0PJF4; E9Q616; Q6UIL4; Q8CGE7; Q8VDN3; Q8BKS2 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=2 0 2 2 0.1442 0 1 1 1 559.84485 1118.68242 1118.68215 0.25 0.00014 0/0 0 0 53921392 HCD 30 MS2 5.427749 720.7 19.977 65.3069 19318 19318 19317 QEplus033719.raw F4 786.3 646.6 750.2 609.5 887.9 643.6 309 2.15 2 FALSE 0.005324 0.09067 0.032 -250 91619 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDEHLAKK [K].vDEHLAkk.[DG] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 5 O35639 Annexin A3 OS=Mus musculus OX=10090 GN=Anxa3 PE=1 SV=4 O35639; Q8C1X9; Q3TLP4; Q3TFK4; Q3U737 Annexin A3 OS=Mus musculus OX=10090 GN=Anxa3 PE=1 SV=4; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1 1 4 4 0.6528 0 1 1 1 407.50946 1627.01601 1627.0146 0.87 0.00035 0/0 0 0 16811684 HCD 30 MS2 24.40245 903.1 110 65.3094 19319 19319 19317 QEplus033719.raw F4 889.8 911.7 956.7 647.1 1330.6 682.9 196 2.65 1 FALSE 1.14E-05 0.0004667 0.728 -250 91633 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LFQECCPHSTDR [K].lFQEccPHSTDR.[V] N-Term(TMT6plex); C5(Carbamidomethyl); C6(Carbamidomethyl) 16 Q5FWJ5 Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 P61979-3; Q3U9Q3; A0A286YCM2; Q3TUA1; Q5FWJ5; H3BKD0; H3BK96; P61979; H3BLL4; A0A286YDM3; B2M1R6; Q3TG17; Q3U6X2; Q3TL71; Q3TJ38; H3BKI8 Isoform 3 of Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1 0 3 3 0.827 0 1 1 1 593.61017 1778.81595 1778.81515 0.45 0.00027 0/0 0 0 62268660 HCD 30 MS2 4.004177 259.8 20.922 65.3161 19322 19322 19317 QEplus033719.raw F4 273.5 267.5 235.2 249.7 360.2 172.6 46 6.3 1 FALSE 1.14E-05 2.20E-11 2.122 -250 91647 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EWADSK [R].eWADSk.[S] N-Term(TMT6plex); K6(TMT6plex) 1 O08553 Dihydropyrimidinase-related protein 2 OS=Mus musculus OX=10090 GN=Dpysl2 PE=1 SV=2 O08553 Dihydropyrimidinase-related protein 2 OS=Mus musculus OX=10090 GN=Dpysl2 PE=1 SV=2 0 2 2 0.4526 0 1 1 1 597.3313 1193.65532 1193.65666 -1.12 -0.00067 0/0 0 0 16585284 HCD 30 MS2 59.66798 1135.9 40.282 65.3209 19324 19324 19317 QEplus033719.raw F4 1173.7 1012.3 1146.1 889.7 1569 1024.4 290 1.9 1 FALSE 0.004576 0.08098 0.059 -250 91649 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTLVQTK [K].gTLVQTk.[G] N-Term(TMT6plex); K7(TMT6plex) 5 P43274; Q1WWK3; P43275 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2;Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1;Histone H1.1 OS=Mus musculus OX=10090 GN=H1-1 PE=1 SV=2 P43274; Q1WWK3; P43275; P43276; P43277 Histone H1.4 OS=Mus musculus OX=10090 GN=H1-4 PE=1 SV=2; Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1; Histone H1.1 OS=Mus musculus OX=10090 GN=H1-1 PE=1 SV=2; Histone H1.5 OS=Mus musculus OX=10090 GN=H1-5 PE=1 SV=2; Histone H1.3 OS=Mus musculus OX=10090 GN=H1-3 PE=1 SV=2 0 2 2 0.2966 0 1 1 1 602.88757 1204.76787 1204.76654 1.1 0.00066 0/0 0 0 10781856 HCD 30 MS2 40.13773 1097.7 110 65.3235 19325 19325 19317 QEplus033719.raw F4 1041.9 1013.5 1150.7 827.9 1485.8 1066.5 223 2.63 3 FALSE 0.0006216 0.009244 0.417 -250 91659 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRGDAAAGPGAGAGAGAAAEPEPR [R].lRGDAAAGPGAGAGAGAAAEPEPR.[H] N-Term(TMT6plex) 2 P97346 Nucleoredoxin OS=Mus musculus OX=10090 GN=Nxn PE=1 SV=1 P97346-2; P97346 Isoform 2 of Nucleoredoxin OS=Mus musculus OX=10090 GN=Nxn; Nucleoredoxin OS=Mus musculus OX=10090 GN=Nxn PE=1 SV=1 1 3 3 0.8507 0 1 1 1 773.73792 2319.19919 2319.20029 -0.47 -0.00036 0/0 0 0 4920857 HCD 30 MS2 11.40552 230.5 110 65.326 19326 19326 19317 QEplus033719.raw F4 241.1 192.9 261 194.5 248 245.4 327 7.77 1 FALSE 1.14E-05 6.31E-16 5.274 -250 91669 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQDIEAEASEER [K].tQDIEAEASEER.[Q] N-Term(TMT6plex) 1 Q7TQ48-1 Isoform 2 of Sarcalumenin OS=Mus musculus OX=10090 GN=Srl Q7TQ48-1 Isoform 2 of Sarcalumenin OS=Mus musculus OX=10090 GN=Srl 0 2 2 0.523 0 1 1 1 803.89191 1606.77654 1606.77577 0.47 0.00038 0/0 0 0 3808069.25 HCD 30 MS2 0 289.7 110 65.3358 19329 19329 19328 QEplus033719.raw F4 299.9 166.9 285.7 387.8 210.2 387.7 100 3.92 1 FALSE 1.14E-05 5.30E-10 1.859 -250 91687 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETEGDVTSVK [K].eTEGDVTSVk.[D] N-Term(TMT6plex); K10(TMT6plex) 7 Q6A0F1 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1 Q9CS06; Q8BVY8; Q3UKQ2; Q6A0F1; H3BL49; P42932; Q9WVS5 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1; T-complex protein 1 subunit theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=3; CCT-theta OS=Mus musculus OX=10090 GN=Cctq PE=3 SV=1 0 3 3 0.6694 0 1 1 1 508.28406 1522.83762 1522.83647 0.75 0.00038 0/0 0 0 34490788 HCD 30 MS2 22.52068 865 47.651 65.3406 19331 19331 19328 QEplus033719.raw F4 948 704 891.9 772.2 916.9 956.9 394 3.63 1 FALSE 1.14E-05 4.47E-05 0.924 -250 91695 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QCVDHYNEIK [K].qcVDHYNEIk.[R] N-Term(TMT6plex); C2(Carbamidomethyl); K10(TMT6plex) 1 Q99LC3 "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial OS=Mus musculus OX=10090 GN=Ndufa10 PE=1 SV=1" Q99LC3 "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial OS=Mus musculus OX=10090 GN=Ndufa10 PE=1 SV=1" 0 3 3 0.6895 0 1 1 1 588.64386 1763.91703 1763.91508 1.11 0.00065 0/0 0 0 16418567 HCD 30 MS2 50.8307 1481.3 110 65.343 19332 19332 19328 QEplus033719.raw F4 1457.8 1282 1561.1 1239.5 1767.3 1580.3 269 2.48 1 FALSE 2.26E-05 0.0009688 0.665 -250 91701 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSNMDFREPTEEER [R].gSNMDFREPTEEER.[A] N-Term(TMT6plex) 4 Q80U88 Eukaryotic translation initiation factor 4H (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0038 PE=4 SV=3 Q80U88; Q9WUK2-2; Q3V244; Q9WUK2 Eukaryotic translation initiation factor 4H (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0038 PE=4 SV=3; Isoform Short of Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h; Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h PE=2 SV=1; Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h PE=1 SV=3 1 3 3 0.5768 0 1 1 1 642.63354 1925.88608 1925.88607 0.01 0 0/0 0 0 11319993 HCD 30 MS2 5.353503 748.3 110 65.3456 19333 19333 19328 QEplus033719.raw F4 721 667.2 857.8 594.9 894.8 754 55 3.97 1 FALSE 1.14E-05 8.48E-07 1.251 -250 91709 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKKPAAAAVTK [K].akkPAAAAVTk.[K] N-Term(TMT6plex); K2(TMT6plex); K3(TMT6plex); K11(TMT6plex) 2 P15864 Histone H1.2 OS=Mus musculus OX=10090 GN=H1-2 PE=1 SV=2 Q3UXH2; P15864 H15 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=H1f2 PE=2 SV=1; Histone H1.2 OS=Mus musculus OX=10090 GN=H1-2 PE=1 SV=2 1 4 4 0.473 0 1 1 1 493.83319 1972.31093 1972.30888 1.04 0.00051 0/0 0 0 11848626 HCD 30 MS2 36.99291 994.1 110 65.3481 19334 19334 19328 QEplus033719.raw F4 981.1 1178 1100.7 907.6 1082.6 714.7 39 3.7 1 FALSE 1.14E-05 0.0004737 0.727 -250 91718 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSSDMPETITSR [K].sSSDMPETITSR.[D] N-Term(TMT6plex) 6 A3KGR9 Histocompatibility 13 (Fragment) OS=Mus musculus OX=10090 GN=H13 PE=1 SV=1 A3KGR9; Q9D8V0; Q9D8V0-3; Q9D8V0-2; Q6PGJ8; Q9D8V0-4 Histocompatibility 13 (Fragment) OS=Mus musculus OX=10090 GN=H13 PE=1 SV=1; Minor histocompatibility antigen H13 OS=Mus musculus OX=10090 GN=Hm13 PE=1 SV=1; Isoform 3 of Minor histocompatibility antigen H13 OS=Mus musculus OX=10090 GN=Hm13; Isoform 2 of Minor histocompatibility antigen H13 OS=Mus musculus OX=10090 GN=Hm13; H13 protein OS=Mus musculus OX=10090 GN=H13 PE=1 SV=1; Isoform 4 of Minor histocompatibility antigen H13 OS=Mus musculus OX=10090 GN=Hm13 0 2 2 0.5954 0 1 1 1 770.38037 1539.75347 1539.7522 0.82 0.00063 0/0 0 0 11064531 HCD 30 MS2 0 335.5 110 65.3506 19335 19335 19328 QEplus033719.raw F4 304.4 292.4 371.2 282.8 363.2 399.1 137 3.93 1 FALSE 1.14E-05 8.37E-09 1.632 -250 91728 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPPPGMGLNQNR [R].sPPPGMGLNQNR.[G] N-Term(TMT6plex) 1 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" 0 2 2 0.5333 0 1 1 1 748.89661 1496.78594 1496.78411 1.22 0.00091 0/0 0 0 6600692.5 HCD 30 MS2 31.63032 332.9 110 65.3531 19336 19336 19328 QEplus033719.raw F4 312.6 314.3 368.9 261.7 414.2 325.8 308 2.4 1 FALSE 1.14E-05 5.22E-07 1.291 -250 91738 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMEEMNGK [K].aMEEMNGk.[D] N-Term(TMT6plex); K8(TMT6plex) 8 A0A0R4J259 Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1 G3UZI2; G3V018; G3UZ48; G3UXJ6; Q7TMK9; A0A0R4J259; Q3TRV3; Q7TMK9-2 Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=1; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Syncrip PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip 0 2 2 0.6544 0 1 1 1 684.35608 1367.70488 1367.70633 -1.06 -0.00072 0/0 0 0 6049323.5 HCD 30 MS2 0 1100 110 65.3556 19337 19337 19328 QEplus033719.raw F4 1193.4 1005.3 1150.7 850.4 1275.7 1124.6 191 3.27 1 FALSE 1.14E-05 0.0005541 0.713 -250 91745 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQLEEEEEAKR [R].eQLEEEEEAkR.[N] N-Term(TMT6plex); K10(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 1 2 2 0.6219 0 1 1 1 924.49396 1847.98064 1847.97509 3 0.00277 0/0 0 0 4115006.5 HCD 30 MS2 0 166.8 110 65.3582 19338 19338 19328 QEplus033719.raw F4 145.1 218.3 196.2 148.6 150.8 141.7 339 4.02 1 FALSE 1.14E-05 2.70E-10 1.915 -250 91756 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLIHDQDEEEEEEEGQR [R].dLIHDQDEEEEEEEGQR.[FS] N-Term(TMT6plex) 5 Q3UVN5 NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1 Q3KQQ1; Q9CZ44-2; Q3UVN5; Q9CZ44; A2AT02 NSFL1 cofactor p47 (Fragment) OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1; Isoform 2 of NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=2 SV=1; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=1 SV=1; NSFL1 cofactor p47 OS=Mus musculus OX=10090 GN=Nsfl1c PE=1 SV=1 0 3 3 0.8805 0 1 1 1 777.01428 2329.02829 2329.02652 0.76 0.00059 0/0 0 0 24427670 HCD 30 MS2 7.030267 200.8 110 65.368 19341 19341 19339 QEplus033719.raw F4 188.9 179.7 238.9 166.4 206.4 224.5 26 7.11 1 FALSE 1.14E-05 6.31E-16 3.726 -250 91764 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLELSENR [K].kLELSENR.[I] N-Term(TMT6plex); K1(TMT6plex) 8 Q9EST5; O35381 Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Mus musculus OX=10090 GN=Anp32b PE=1 SV=1;Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 Q9EST5; Q3UW32; Q64G17; Q9EST5-2; F6UFG6; D3YYE1; D3Z7M9; O35381 Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Mus musculus OX=10090 GN=Anp32b PE=1 SV=1; LRRcap domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Anp32b PE=2 SV=1; Putative acidic leucine-rich nuclear phosphoprotein 32 family member C OS=Mus musculus OX=10090 GN=Anp32c PE=2 SV=3; Isoform 2 of Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Mus musculus OX=10090 GN=Anp32b; Acidic leucine-rich nuclear phosphoprotein 32 family member A (Fragment) OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A (Fragment) OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 1 3 3 0.3438 0 1 1 1 482.96124 1446.86917 1446.86805 0.78 0.00038 0/0 0 0 78520272 HCD 30 MS2 9.922932 1035.4 24.68 65.3703 19342 19342 19339 QEplus033719.raw F4 1116.9 1065.3 1153.4 729 1149.5 998.3 455 2.88 2 FALSE 0.0002419 0.004796 0.506 -250 91778 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPSGTVSEAQLAR [K].gPSGTVSEAQLAR.[R] N-Term(TMT6plex) 7 B9EK95 Myof protein OS=Mus musculus OX=10090 GN=Myof PE=2 SV=1 Q69ZN7-2; A0A286YDF5; B9EK95; Q69ZN7-4; E9Q390; Q69ZN7-3; Q69ZN7 Isoform 2 of Myoferlin OS=Mus musculus OX=10090 GN=Myof; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=1; Myof protein OS=Mus musculus OX=10090 GN=Myof PE=2 SV=1; Isoform 4 of Myoferlin OS=Mus musculus OX=10090 GN=Myof; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=2; Isoform 3 of Myoferlin OS=Mus musculus OX=10090 GN=Myof; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=2 0 2 2 0.7076 0 1 1 1 751.41266 1501.81804 1501.81719 0.57 0.00043 0/0 0 0 19944128 HCD 30 MS2 0 484.2 110 65.3751 19344 19344 19339 QEplus033719.raw F4 467.2 476.2 575.3 375.9 532.7 478.1 348 3.83 1 FALSE 1.14E-05 4.02E-09 1.692 -250 91786 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CIIPNHEK [R].cIIPNHEk.[RK] N-Term(TMT6plex); C1(Carbamidomethyl); K8(TMT6plex) 14 Q69ZX3; Q5SV64; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; Q80T68; A0A2R8VHF9; Q8BLI3; Q8BWI3; A0A338P6K2; O08638-2; O08638; Q5SV64; Q3UH59; Q8VDD5; E9QPE7; Q8BLI1; Q61879 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 0 3 3 0.6015 0 1 1 1 490.28406 1468.83762 1468.83464 2.03 0.00099 0/0 0 0 16592406 HCD 30 MS2 62.88567 908.3 27.85 65.3773 19345 19345 19339 QEplus033719.raw F4 1010 742.4 1049.2 740.1 1021.7 886.5 303 2.66 3 FALSE 0.0002518 0.005124 0.498 -250 91793 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKEEIERR [R].lkEEIERR.[R] N-Term(TMT6plex); K2(TMT6plex) 8 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; Q3UGC3; E9QA15; E9Q0M9; D3Z6I7; S4R1T7; E9QA16; F6QLP8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 2 4 4 0.1736 0 1 1 1 383.48941 1530.93581 1530.9368 -0.64 -0.00025 0/0 0 0 14413943 HCD 30 MS2 6.775639 702.6 83.686 65.3796 19346 19346 19339 QEplus033719.raw F4 897.5 633.6 709.5 464.2 1026.4 484.1 401 2.65 1 FALSE 0.001335 0.01841 0.296 -250 91808 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKEEIERR [R].lkEEIERR.[R] N-Term(TMT6plex); K2(TMT6plex) 8 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; Q3UGC3; E9QA15; E9Q0M9; D3Z6I7; S4R1T7; E9QA16; F6QLP8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 2 3 3 0.234 0 1 1 1 510.98428 1530.9383 1530.9368 0.98 0.0005 0/0 0 0 9054664 HCD 30 MS2 43.15894 976.4 110 65.3844 19348 19348 19339 QEplus033719.raw F4 1035.5 783.9 934.8 680.3 1530.3 893.8 407 2.65 1 FALSE 1.14E-05 0.0009187 0.67 -250 91815 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLELSENR [K].kLELSENR.[I] N-Term(TMT6plex); K1(TMT6plex) 8 Q9EST5; O35381 Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Mus musculus OX=10090 GN=Anp32b PE=1 SV=1;Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 Q9EST5; Q3UW32; Q64G17; Q9EST5-2; F6UFG6; D3YYE1; D3Z7M9; O35381 Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Mus musculus OX=10090 GN=Anp32b PE=1 SV=1; LRRcap domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Anp32b PE=2 SV=1; Putative acidic leucine-rich nuclear phosphoprotein 32 family member C OS=Mus musculus OX=10090 GN=Anp32c PE=2 SV=3; Isoform 2 of Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Mus musculus OX=10090 GN=Anp32b; Acidic leucine-rich nuclear phosphoprotein 32 family member A (Fragment) OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A (Fragment) OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 1 2 2 0.5 0 1 1 1 723.93781 1446.86833 1446.86805 0.2 0.00014 0/0 0 0 11531848 HCD 30 MS2 21.30966 447.9 110 65.3942 19351 19351 19350 QEplus033719.raw F4 483.2 457.9 477.8 342.8 514.4 411.4 447 2.88 2 FALSE 1.14E-05 0.0001986 0.8 -250 91848 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPTDTASVQNEAK [K].kPTDTASVQNEAk.[L] N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex) 5 Q3TF74 Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1 Q3TF74; Q5PPQ7; Q3TEU8; Q9WUM4; Q3U8F0 Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin-1C OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1 0 3 3 0.7202 0 1 1 1 692.73492 2076.19022 2076.19039 -0.08 -0.00006 0/0 0 0 8219124.5 HCD 30 MS2 0 470.3 110 65.404 19355 19355 19350 QEplus033719.raw F4 472.5 438.9 507 303.6 624 476 438 6.79 1 FALSE 1.14E-05 6.31E-16 3.231 -250 91854 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLPSSTSTAAK [R].sLPSSTSTAAk.[T] N-Term(TMT6plex); K11(TMT6plex) 4 Q9DBR7 Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2 Q3TS88; Q9DBR7; A0A1W2P750; Q9DBR7-2 PRKG1_interact domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ppp1r12a PE=2 SV=1; Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2; Protein phosphatase 1 regulatory subunit 12A (Fragment) OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=1; Isoform 2 of Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a 0 2 2 0.409 0 1 1 1 754.44208 1507.87688 1507.87319 2.44 0.00184 0/0 0 0 9287367 HCD 30 MS2 0 509.2 110 65.4065 19356 19356 19350 QEplus033719.raw F4 523.1 425.5 567.3 437.6 538.1 563.6 459 3.57 1 FALSE 1.14E-05 1.76E-09 1.76 -250 91864 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSNNYYCTR [K].lSNNYYcTR.[D] N-Term(TMT6plex); C7(Carbamidomethyl) 2 Q9Z1P6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 OS=Mus musculus OX=10090 GN=Ndufa7 PE=1 SV=3 A0A068BGR9; Q9Z1P6 Complex I-B14.5a OS=Mus musculus OX=10090 GN=Ndufa7 PE=2 SV=1; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 OS=Mus musculus OX=10090 GN=Ndufa7 PE=1 SV=3 0 2 2 0.7259 0 1 1 1 710.34735 1419.68743 1419.68882 -0.98 -0.00069 0/0 0 0 8064529 HCD 30 MS2 30.81582 501 110 65.409 19357 19357 19350 QEplus033719.raw F4 420.1 449.9 585.6 551.5 436.8 562 85 3.21 1 FALSE 1.14E-05 4.61E-05 0.921 -250 91869 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDIAPHVR [K].vDIAPHVR.[D] N-Term(TMT6plex) 5 E9PVA8 eIF-2-alpha kinase activator GCN1 OS=Mus musculus OX=10090 GN=Gcn1 PE=1 SV=1 Q8BIX2; E9PVA8; Q3UHQ5; Q6PGM5; Q8CHH7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Gcn1 PE=1 SV=1; eIF-2-alpha kinase activator GCN1 OS=Mus musculus OX=10090 GN=Gcn1 PE=1 SV=1; TOG domain-containing protein OS=Mus musculus OX=10090 GN=Gcn1 PE=2 SV=1; Gcn1l1 protein (Fragment) OS=Mus musculus OX=10090 GN=Gcn1 PE=2 SV=1; MKIAA0219 protein (Fragment) OS=Mus musculus OX=10090 GN=Gcn1 PE=2 SV=1 0 3 3 0.4251 0 1 1 1 379.23096 1135.67832 1135.67851 -0.17 -0.00006 0/0 0 0 6219272 HCD 30 MS2 24.10308 447.4 109.791 65.4115 19358 19358 19350 QEplus033719.raw F4 473.6 369.5 459.4 341.7 571.2 469 284 3.34 1 FALSE 1.14E-05 8.42E-05 0.871 -250 91887 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHGPGIQSGTTNKPNK [R].vHGPGIQSGTTNkPNk.[F] N-Term(TMT6plex); K13(TMT6plex); K16(TMT6plex) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 4 4 0.7007 0 1 1 1 581.34491 2322.35781 2322.34969 3.5 0.00203 0/0 0 0 39062640 HCD 30 MS2 9.493267 862.5 42.266 65.4163 19360 19360 19350 QEplus033719.raw F4 905.4 772.3 700.9 693.4 1708.2 394.9 357 4.51 1 FALSE 1.14E-05 4.84E-11 2.057 -250 91895 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNTLNK [K].vNTLNk.[E] N-Term(TMT6plex); K6(TMT6plex) 2 Q8BMS1 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1" Q8BMS1; Q3TB39 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1; 3HCDH_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hadha PE=2 SV=1" 0 2 2 0.212 0 1 1 1 573.867 1146.72673 1146.72468 1.79 0.00103 0/0 0 0 16386954 HCD 30 MS2 39.57428 1281.3 86.967 65.4236 19362 19362 19361 QEplus033719.raw F4 1425.5 887.8 1312.3 1405.1 1363.7 1293.5 187 2.17 1 FALSE 0.004131 0.07596 0.072 -250 91910 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLEEHAK [R].lLEEHAk.[L] N-Term(TMT6plex); K7(TMT6plex) 2 Q61335 B-cell receptor-associated protein 31 OS=Mus musculus OX=10090 GN=Bcap31 PE=1 SV=4 Q61335; Q3U9U5 B-cell receptor-associated protein 31 OS=Mus musculus OX=10090 GN=Bcap31 PE=1 SV=4; B-cell receptor-associated protein OS=Mus musculus OX=10090 GN=Bcap31 PE=2 SV=1 0 3 3 0.6126 0 1 1 1 433.26843 1297.79074 1297.78801 2.11 0.00091 0/0 0 0 72076504 HCD 30 MS2 14.12151 632.5 17.636 65.4281 19364 19364 19361 QEplus033719.raw F4 633 493.8 666.4 601.3 656.3 744.3 228 3.64 1 FALSE 1.14E-05 0.0008922 0.672 -250 91919 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANELQLR [R].aNELQLR.[W] N-Term(TMT6plex) 31 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q499F9; Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q05CR3; Q9QXS1-9; E9Q9J6; Q9QXS1-5; E9PW24; A0A0R4J221; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; A0A0R4J223; Q8C8S5; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.0927 0 1 1 1 536.81989 1072.63249 1072.63122 1.18 0.00064 0/0 0 0 18520956 HCD 30 MS2 40.41813 1091.9 86.398 65.4304 19365 19365 19361 QEplus033719.raw F4 1239.4 1006.8 1118.6 891.5 1144.2 1150.8 350 2.05 2 FALSE 0.001335 0.01868 0.293 -250 91941 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGSTENIK [K].vGSTENIk.[H] N-Term(TMT6plex); K8(TMT6plex) 11 P27546 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 P27546; P27546-2; A0A0G2JFK3; A0A0G2JFT4; A0A0G2JG35; A0A140T8T5; P27546-3; A0A0G2JDY5; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 2 2 0.4505 0 1 1 1 653.39398 1305.78069 1305.77784 2.18 0.00143 0/0 0 0 11114681 HCD 30 MS2 15.56064 1002.5 110 65.4377 19368 19368 19361 QEplus033719.raw F4 1120.7 870.6 1030.7 753.8 1224.5 1014.9 403 2.73 1 FALSE 0.0006294 0.009561 0.412 -250 91951 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEVLGTQSK [K].sEVLGTQSk.[A] N-Term(TMT6plex); K9(TMT6plex) 1 Q9CQW1 Synaptobrevin homolog YKT6 OS=Mus musculus OX=10090 GN=Ykt6 PE=1 SV=1 Q9CQW1 Synaptobrevin homolog YKT6 OS=Mus musculus OX=10090 GN=Ykt6 PE=1 SV=1 0 2 2 0.6226 0 1 1 1 703.91644 1406.82561 1406.82552 0.07 0.00005 0/0 0 0 10530176 HCD 30 MS2 30.54793 933.6 110 65.4402 19369 19369 19361 QEplus033719.raw F4 1059.2 782.3 993.6 855.4 1015.3 895.6 392 3.18 1 FALSE 1.14E-05 2.71E-06 1.155 -250 91966 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTLEDEAK [K].kTLEDEAk.[T] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 1 3 3 0.1649 0 1 1 1 541.00128 1620.98929 1620.97755 7.24 0.00391 0/0 0 0 9658329 HCD 30 MS2 25.15266 1356.2 110 65.4452 19371 19371 19361 QEplus033719.raw F4 1334.2 1577.8 1383.3 1038.5 1583.5 1219.6 352 1.88 1 FALSE 9.73E-05 0.003016 0.558 -250 91973 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WNTEDK [K].wNTEDk.[V] N-Term(TMT6plex); K6(TMT6plex) 1 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 0 2 2 0.291 0 1 1 1 625.84338 1250.67949 1250.67812 1.09 0.00068 0/0 0 0 26955052 HCD 30 MS2 5.475265 1632.4 110 65.455 19374 19374 19372 QEplus033719.raw F4 1962.5 1319.7 1519.1 1626 1734.2 1632.8 306 2.44 1 FALSE 0.005285 0.09044 0.033 -250 91980 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENLESLR [K].eNLESLR.[S] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.2379 0 1 1 1 545.30945 1089.61162 1089.61015 1.35 0.00073 0/0 0 0 70061616 HCD 30 MS2 14.41042 712.5 18.462 65.4573 19375 19375 19372 QEplus033719.raw F4 817.1 443.7 815.2 688.6 608.5 902.1 311 2.69 1 FALSE 0.0003408 0.006509 0.468 -250 92015 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LCEIER [K].lcEIER.[I] N-Term(TMT6plex); C2(Carbamidomethyl) 4 Q7TNV0 Protein DEK OS=Mus musculus OX=10090 GN=Dek PE=1 SV=1 Q7TNV0; E9Q8Y1; Q3U4W4; D3YVJ6 Protein DEK OS=Mus musculus OX=10090 GN=Dek PE=1 SV=1; Protein DEK (Fragment) OS=Mus musculus OX=10090 GN=Dek PE=1 SV=1; SAP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dek PE=2 SV=1; Protein DEK (Fragment) OS=Mus musculus OX=10090 GN=Dek PE=1 SV=1 0 2 2 0.2445 0 1 1 2 524.78772 1048.56816 1048.56585 2.21 0.00116 0/0 0 0 17846844 HCD 30 MS2 33.3909 1323.3 110 65.4665 19379 19379 19372 QEplus033719.raw F4 1365.4 1284.5 1334 935.9 1763.6 1256.3 332 2.29 1 FALSE 0.009555 0.1812 -0.118 -250 92019 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHGAFDAVK [R].eHGAFDAVk.[C] N-Term(TMT6plex); K9(TMT6plex) 5 Q3TW74 "C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1" A0A1W2P7L5; Q3UZH3; A0A1W2P733; Q3TW74; Q922D8 "C-1-tetrahydrofolate synthase, cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Mthfd1 PE=1 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=1 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=1 SV=4" 0 3 3 0.6282 0 1 1 1 477.93869 1431.80152 1431.79963 1.31 0.00063 0/0 0 0 15631517 HCD 30 MS2 25.11492 741.5 60.316 65.4688 19380 19380 19372 QEplus033719.raw F4 723.8 701.7 819.7 565.6 810.5 827.8 381 4.76 1 FALSE 1.14E-05 1.62E-07 1.388 -250 92026 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESEEEVAVK [R].eSEEEVAVk.[Y] N-Term(TMT6plex); K9(TMT6plex) 4 Q9QZV4 Histidine-rich Ca2+ binding protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1 Q9QZV4; Q9WVE4; G5E8J6; B9EIW1 Histidine-rich Ca2+ binding protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1; Histidine-rich calcium-binding protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1; Histidine-rich calcium-binding protein OS=Mus musculus OX=10090 GN=Hrc PE=1 SV=1; Hrc protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1 0 2 2 0.593 0 1 1 1 739.41095 1477.81462 1477.81501 -0.26 -0.00019 0/0 0 0 10132473 HCD 30 MS2 0 618 110 65.4713 19381 19381 19372 QEplus033719.raw F4 712.1 196.5 577.9 969 242.1 1010.4 396 3.71 1 FALSE 1.14E-05 3.22E-06 1.141 -250 92029 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLVGPELHDR [K].gLVGPELHDR.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.0323 0 1 1 1 661.38031 1321.75334 1321.74256 8.15 0.00539 0/0 0 0 8313369 HCD 30 MS2 38.09589 1079.6 110 65.4738 19382 19382 19372 QEplus033719.raw F4 1113.7 965 1159.5 854 1274.5 1111.1 439 2.48 2 FALSE 0.0002119 0.004267 0.52 -250 92038 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVTSATNALR [K].eVTSATNALR.[S] N-Term(TMT6plex) 3 Q62189 U1 small nuclear ribonucleoprotein A OS=Mus musculus OX=10090 GN=Snrpa PE=1 SV=3 Q9CXX7; Q62189; D3Z0S6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Snrpa PE=2 SV=1; U1 small nuclear ribonucleoprotein A OS=Mus musculus OX=10090 GN=Snrpa PE=1 SV=3; U1 small nuclear ribonucleoprotein A (Fragment) OS=Mus musculus OX=10090 GN=Snrpa PE=1 SV=1 0 2 2 0.5064 0 1 1 1 645.86664 1290.726 1290.7215 3.49 0.00225 0/0 0 0 10216061 HCD 30 MS2 25.46138 922.8 110 65.4812 19384 19384 19383 QEplus033719.raw F4 957.9 811.4 1001.4 718 1110.9 936.9 369 3.12 1 FALSE 0.0001603 0.003814 0.532 -250 92044 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YVEEQPGNLQR [K].yVEEQPGNLQR.[G] N-Term(TMT6plex) 3 Q78IK4 MICOS complex subunit Mic27 OS=Mus musculus OX=10090 GN=Apool PE=1 SV=1 Q78IK4; B1AV14; Q9CZB4 MICOS complex subunit Mic27 OS=Mus musculus OX=10090 GN=Apool PE=1 SV=1; MICOS complex subunit OS=Mus musculus OX=10090 GN=Apool PE=1 SV=1; MICOS complex subunit OS=Mus musculus OX=10090 GN=Apool PE=2 SV=1 0 2 2 0.7347 0 1 1 1 781.41003 1561.81279 1561.81719 -2.81 -0.0022 0/0 0 0 10581011 HCD 30 MS2 0 419.6 110 65.4837 19385 19385 19383 QEplus033719.raw F4 393.1 339.7 465.2 458.2 387.5 473.8 258 3.77 1 FALSE 1.14E-05 3.54E-08 1.513 -250 92064 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIEEQTVK [R].qIEEQTVk.[A] N-Term(TMT6plex); K8(TMT6plex) 6 P26043 Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3 P26043; Q3TH46; Q3U111; A0A5F8MPB9; Q7TSG6; Q3UJJ8 Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=1; Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1 0 2 2 0.4839 0 1 1 1 716.92523 1432.84319 1432.84117 1.41 0.00101 0/0 0 0 11703880 HCD 30 MS2 43.58934 834.3 110 65.491 19388 19388 19383 QEplus033719.raw F4 785.7 783.4 859.3 677.2 1005 894.9 509 3.72 1 FALSE 1.14E-05 0.0001058 0.852 -250 92072 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLEEHAK [R].lLEEHAk.[L] N-Term(TMT6plex); K7(TMT6plex) 2 Q61335 B-cell receptor-associated protein 31 OS=Mus musculus OX=10090 GN=Bcap31 PE=1 SV=4 Q61335; Q3U9U5 B-cell receptor-associated protein 31 OS=Mus musculus OX=10090 GN=Bcap31 PE=1 SV=4; B-cell receptor-associated protein OS=Mus musculus OX=10090 GN=Bcap31 PE=2 SV=1 0 2 2 0.5809 0 1 1 1 649.39825 1297.78923 1297.78801 0.94 0.00061 0/0 0 0 9029538 HCD 30 MS2 26.07596 938.3 110 65.4935 19389 19389 19383 QEplus033719.raw F4 909.2 782.7 1013.9 861.6 994.7 1067.6 220 3.03 1 FALSE 0.0002909 0.005895 0.481 -250 92081 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSGIDFK [K].hSGIDFk.[Q] N-Term(TMT6plex); K7(TMT6plex) 2 O55222 Integrin-linked protein kinase OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2 O55222; D3YZA5 Integrin-linked protein kinase OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2; Integrin-linked protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Ilk PE=1 SV=2 0 3 3 0.4415 0 1 1 1 421.24832 1261.73041 1261.73049 -0.06 -0.00003 0/0 0 0 8685284 HCD 30 MS2 49.35651 939.6 110 65.496 19390 19390 19383 QEplus033719.raw F4 1054.5 795.9 1014.4 764.2 1020.7 987.9 443 3.42 1 FALSE 1.14E-05 0.0007985 0.682 -250 92086 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGYGFNEPEQTR [R].sGYGFNEPEQTR.[F] N-Term(TMT6plex) 2 A0A0R4J098 Zinc finger protein 326 OS=Mus musculus OX=10090 GN=Zfp326 PE=1 SV=1 A0A0R4J098; O88291 Zinc finger protein 326 OS=Mus musculus OX=10090 GN=Zfp326 PE=1 SV=1; DBIRD complex subunit ZNF326 OS=Mus musculus OX=10090 GN=Znf326 PE=1 SV=1 0 2 2 0.7211 0 1 1 1 807.39227 1613.77727 1613.77572 0.96 0.00078 0/0 0 0 5548566.5 HCD 30 MS2 0 223.2 110 65.4985 19391 19391 19383 QEplus033719.raw F4 217.1 219.3 250.6 163.9 290.8 197.4 91 3.98 1 FALSE 1.14E-05 2.00E-10 1.94 -250 92095 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YDQQAEEDLR [K].yDQQAEEDLR.[N] N-Term(TMT6plex) 2 Q9DAW9 Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 Q9DAW9; A0A0G2JDV8 Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 0 2 2 0.6959 0 1 1 1 748.36578 1495.72429 1495.72262 1.12 0.00084 0/0 0 0 3213872.5 HCD 30 MS2 46.85272 325.5 110 65.501 19392 19392 19383 QEplus033719.raw F4 326.9 298.6 351.7 225.5 408.4 341.6 92 2.96 1 FALSE 1.14E-05 4.15E-06 1.12 -250 92100 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETEITPEDGED [K].eTEITPEDGED.[-] N-Term(TMT6plex) 13 Q9WV92-2 Isoform 2 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 Q9WV92; A7MCX4; A0A3B2WD96; D0VYV7; Q9WV92-3; B6ZHD1; D0VYV6; Q9WV92-2; V6BQR3; A0A286YD84; A7YY80; A0A5F8MPR1; A0A5F8MPE1 Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Epb4.1l3 protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Erythrocyte protein band 4.1-like 3 isoform C OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Isoform 3 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Erythrocyte protein band 4.1-like 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Isoform 2 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; 60kDa 4.1B MEF cell isoform (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Band 4.1-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; 130kDa Protein 4.1B MEF cell isoform OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1 0 2 2 0.9206 0 1 1 1 732.33423 1463.66118 1463.65868 1.71 0.00125 0/0 0 0 2431654 HCD 30 MS2 0 196.6 110 65.5035 19393 19393 19383 QEplus033719.raw F4 206.5 159.2 207.8 172.1 215.1 219.1 22 3.15 1 FALSE 1.14E-05 9.50E-05 0.861 -250 92106 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEYDEAGPSIVHR [K].qEYDEAGPSIVHR.[K] N-Term(TMT6plex) 8 Q3UIJ3; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q3TG92; Q3UIJ3; Q9CXK3; Q61272; P62737; P68134; P68033; Q61264 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1" 0 3 3 0.8458 0 1 1 1 577.29572 1729.87259 1729.87068 1.11 0.00064 0/0 0 0 29860906 HCD 30 MS2 13.69432 451.1 43.837 65.5131 19396 19396 19394 QEplus033719.raw F4 468.4 339.1 435.2 531.6 474 458.1 189 4.93 3 FALSE 1.14E-05 3.44E-09 1.705 -250 92113 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EALLQASR [K].eALLQASR.[D] N-Term(TMT6plex) 3 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4; Q3TZQ2 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 0 2 2 0.4693 0 1 1 1 558.83295 1116.65862 1116.65744 1.06 0.00059 0/0 0 0 130056184 HCD 30 MS2 5.753839 484.3 10.416 65.5154 19397 19397 19394 QEplus033719.raw F4 491.2 436.1 494.2 365.2 625.7 493.3 354 2.77 1 FALSE 1.14E-05 0.0006502 0.7 -250 92125 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMCVGEK [R].eMcVGEk.[R] N-Term(TMT6plex); C3(Carbamidomethyl); K7(TMT6plex) 1 Q9Z247 Peptidyl-prolyl cis-trans isomerase FKBP9 OS=Mus musculus OX=10090 GN=Fkbp9 PE=1 SV=1 Q9Z247 Peptidyl-prolyl cis-trans isomerase FKBP9 OS=Mus musculus OX=10090 GN=Fkbp9 PE=1 SV=1 0 2 2 0.5724 0 1 1 1 655.84668 1310.68608 1310.68486 0.93 0.00061 0/0 0 0 28506358 HCD 30 MS2 24.5348 1556.1 110 65.5201 19399 19399 19394 QEplus033719.raw F4 1606.4 1398.1 1674.2 1126.5 1943 1588.6 189 3.04 1 FALSE 0.0006383 0.009785 0.408 -250 92139 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADDYEQVK [R].aDDYEQVk.[N] N-Term(TMT6plex); K8(TMT6plex) 2 P51863 V-type proton ATPase subunit d 1 OS=Mus musculus OX=10090 GN=Atp6v0d1 PE=1 SV=2 Q921S5; P51863 V-type proton ATPase subunit OS=Mus musculus OX=10090 GN=Atp6v0d1 PE=2 SV=1; V-type proton ATPase subunit d 1 OS=Mus musculus OX=10090 GN=Atp6v0d1 PE=1 SV=2 0 2 2 0.6667 0 1 1 1 713.3855 1425.76372 1425.76258 0.8 0.00057 0/0 0 0 20186932 HCD 30 MS2 9.187878 924.7 110 65.5249 19401 19401 19394 QEplus033719.raw F4 868.9 717.2 1109.5 1033.3 739.9 1079.2 261 3.3 1 FALSE 1.14E-05 0.00028 0.771 -250 92145 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IRPTPEYQK [K].iRPTPEYQk.[Y] N-Term(TMT6plex); K9(TMT6plex) 6 A2AL50 Alkylglycerone-phosphate synthase OS=Mus musculus OX=10090 GN=Agps PE=1 SV=1 A2AL50; Q8BKC4; H3BIY5; Q8C0I1; A2AL49; H3BKN2 "Alkylglycerone-phosphate synthase OS=Mus musculus OX=10090 GN=Agps PE=1 SV=1; Alkylglycerone-phosphate synthase OS=Mus musculus OX=10090 GN=Agps PE=2 SV=1; Alkylglycerone-phosphate synthase (Fragment) OS=Mus musculus OX=10090 GN=Agps PE=1 SV=1; Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Mus musculus OX=10090 GN=Agps PE=1 SV=1; Alkylglycerone-phosphate synthase OS=Mus musculus OX=10090 GN=Agps PE=1 SV=1; Alkylglycerone-phosphate synthase OS=Mus musculus OX=10090 GN=Agps PE=1 SV=1" 0 3 3 0.4274 0 1 1 1 530.65283 1589.94394 1589.94155 1.51 0.0008 0/0 0 0 19579542 HCD 30 MS2 66.79484 1523.8 106.015 65.5273 19402 19402 19394 QEplus033719.raw F4 1480.7 1412.4 1584.8 1165.4 2029 1470.2 445 3.51 1 FALSE 0.0002909 0.005835 0.482 -250 92151 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEPAAPQAPAK [K].aEPAAPQAPAk.[S] N-Term(TMT6plex); K11(TMT6plex) 1 Q8CI43 Myosin light chain 6B OS=Mus musculus OX=10090 GN=Myl6b PE=1 SV=1 Q8CI43 Myosin light chain 6B OS=Mus musculus OX=10090 GN=Myl6b PE=1 SV=1 0 3 3 0.5241 0 1 1 1 503.63324 1508.88517 1508.8837 0.97 0.00049 0/0 0 0 15359593 HCD 30 MS2 42.08124 983.8 110 65.5298 19403 19403 19394 QEplus033719.raw F4 1193.6 560.4 932.9 1124.8 851.4 1239.7 398 3.74 1 FALSE 1.14E-05 3.01E-06 1.147 -250 92159 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATAGDTHLGGEDFDNR [K].aTAGDTHLGGEDFDNR.[L] N-Term(TMT6plex) 8 P17879 Heat shock 70 kDa protein 1B OS=Mus musculus OX=10090 GN=Hspa1b PE=1 SV=3 Q9QWU1; Q61696; Q3TAI8; A1E2B8; P16627; B2CSK2; P17879; Q91ZU4 Hsc70t (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Heat shock 70 kDa protein 1A OS=Mus musculus OX=10090 GN=Hspa1a PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Inducible heat shock protein 70 OS=Mus musculus OX=10090 PE=3 SV=1; Heat shock 70 kDa protein 1-like OS=Mus musculus OX=10090 GN=Hspa1l PE=1 SV=4; Heat shock protein 1-like protein OS=Mus musculus OX=10090 PE=3 SV=1; Heat shock 70 kDa protein 1B OS=Mus musculus OX=10090 GN=Hspa1b PE=1 SV=3; Heat shock protein Hsc70t (Fragment) OS=Mus musculus OX=10090 GN=Hsc70t PE=3 SV=1 0 3 3 0.8325 0 1 1 1 635.63605 1904.89359 1904.8936 -0.01 0 0/0 0 0 13796451 HCD 30 MS2 41.69392 1009.4 110 65.5324 19404 19404 19394 QEplus033719.raw F4 1040.3 460.5 972.5 1598.7 572.6 1411.9 70 4 1 FALSE 1.14E-05 2.93E-11 2.098 -250 92190 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAFGKPQGTVAR [R].gAFGkPQGTVAR.[V] N-Term(TMT6plex); K5(TMT6plex) 4 A2AM97 Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1 P86048; I7HLV2; Q3THJ6; A2AM97 60S ribosomal protein L10-like OS=Mus musculus OX=10090 GN=Rpl10l PE=2 SV=1; 60S ribosomal protein L10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=1 SV=1; Ribosomal_L16 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1 0 3 3 0.4239 0 1 1 1 549.6637 1646.97654 1646.97425 1.39 0.00076 0/0 0 0 46534560 HCD 30 MS2 23.82711 1131.3 30.334 65.549 19410 19410 19405 QEplus033719.raw F4 1198.5 940.7 1205 1000.4 1164.8 1278.2 424 2.43 1 FALSE 1.14E-05 0.0003938 0.742 -250 92198 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TISFQSR [K].tISFQSR.[I] N-Term(TMT6plex) 2 Q9R0X4 "Acyl-coenzyme A thioesterase 9, mitochondrial OS=Mus musculus OX=10090 GN=Acot9 PE=1 SV=1" Q32MW3; Q9R0X4 "Acyl-coenzyme A thioesterase 10, mitochondrial OS=Mus musculus OX=10090 GN=Acot10 PE=2 SV=1; Acyl-coenzyme A thioesterase 9, mitochondrial OS=Mus musculus OX=10090 GN=Acot9 PE=1 SV=1" 0 2 2 0.413 0 1 1 1 534.3067 1067.60613 1067.60467 1.36 0.00073 0/0 0 0 22789304 HCD 30 MS2 36.8318 1210.3 63.133 65.5512 19411 19411 19405 QEplus033719.raw F4 1293.5 991.7 1277 1132.3 1251.4 1315.8 150 2.3 1 FALSE 0.001456 0.02102 0.273 -250 92209 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYQAIK [K].tYQAIk.[D] N-Term(TMT6plex); K6(TMT6plex) 2 Q5SWU9 Acetyl-CoA carboxylase 1 OS=Mus musculus OX=10090 GN=Acaca PE=1 SV=1 Q5SWU9-2; Q5SWU9 Isoform 2 of Acetyl-CoA carboxylase 1 OS=Mus musculus OX=10090 GN=Acaca; Acetyl-CoA carboxylase 1 OS=Mus musculus OX=10090 GN=Acaca PE=1 SV=1 0 2 2 0.2208 0 1 1 1 591.36896 1181.73064 1181.72943 1.02 0.0006 0/0 0 0 10595616 HCD 30 MS2 56.12561 1489.3 110 65.556 19413 19413 19405 QEplus033719.raw F4 1571.7 1114.6 1504.3 1412 1564.5 1768.6 155 2.4 1 FALSE 0.003134 0.06117 0.111 -250 92219 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CIIPNHEK [R].cIIPNHEk.[RK] N-Term(TMT6plex); C1(Carbamidomethyl); K8(TMT6plex) 14 Q69ZX3; Q5SV64; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; Q80T68; A0A2R8VHF9; Q8BLI3; Q8BWI3; A0A338P6K2; O08638-2; O08638; Q5SV64; Q3UH59; Q8VDD5; E9QPE7; Q8BLI1; Q61879 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 0 2 2 0.6426 0 1 1 1 734.92438 1468.84148 1468.83464 4.66 0.00342 0/0 0 0 9746683 HCD 30 MS2 36.12295 824.8 110 65.5585 19414 19414 19405 QEplus033719.raw F4 851.8 783.6 938.4 566.1 967.8 840.9 317 3.19 3 FALSE 0.0002909 0.006058 0.477 -250 92225 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YGCLSGVR [R].yGcLSGVR.[V] N-Term(TMT6plex); C3(Carbamidomethyl) 2 Q8BK67 Protein RCC2 OS=Mus musculus OX=10090 GN=Rcc2 PE=1 SV=1 Q8BK67; A2AWQ2 Protein RCC2 OS=Mus musculus OX=10090 GN=Rcc2 PE=1 SV=1; Protein RCC2 (Fragment) OS=Mus musculus OX=10090 GN=Rcc2 PE=1 SV=1 0 2 2 0.519 0 1 1 1 570.80536 1140.60344 1140.60329 0.13 0.00007 0/0 0 0 5342233.5 HCD 30 MS2 71.94933 1372.1 110 65.561 19415 19415 19405 QEplus033719.raw F4 1573.7 1111.9 1340.7 969.5 1745.4 1491.5 129 2.1 1 FALSE 0.002049 0.03628 0.189 -250 92234 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGVACSVSQAQK [R].tGVAcSVSQAQk.[DN] N-Term(TMT6plex); C5(Carbamidomethyl); K12(TMT6plex) 6 Q5EBQ6 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=1 A0A140T8T4; A0A0G2JES3; S4R1R7; D3Z629; Q5M9J5; Q5EBQ6 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9-ps6 PE=3 SV=1; 60S ribosomal protein L9 (Fragment) OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=1; 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9-ps1 PE=3 SV=1; 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=1; 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=2 SV=1; 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=1 0 2 2 0.6939 0 1 1 1 847.47101 1693.93474 1693.93073 2.37 0.00201 0/0 0 0 5539630 HCD 30 MS2 0 378.3 110 65.5683 19417 19417 19416 QEplus033719.raw F4 448.9 278.8 378.6 320.4 406.1 436.9 446 5.39 1 FALSE 1.14E-05 2.21E-12 2.312 -250 92250 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGENADSQIK [K].vGENADSQIk.[L] N-Term(TMT6plex); K10(TMT6plex) 3 Q3U4Y0 H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f0 PE=2 SV=1 Q3U4Y0; Q8C1Y3; P10922 H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f0 PE=2 SV=1; H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f0 PE=2 SV=1; Histone H1.0 OS=Mus musculus OX=10090 GN=H1-0 PE=2 SV=4 0 2 2 0.688 0 1 1 1 759.93085 1518.85442 1518.85279 1.07 0.00081 0/0 0 0 110680304 HCD 30 MS2 19.82076 937 19.888 65.5729 19419 19419 19416 QEplus033719.raw F4 804.8 1004.9 1159.6 795 946.7 911 463 4.07 1 FALSE 1.14E-05 1.82E-07 1.378 -250 92262 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTVVPTK [R].nTVVPTk.[K] N-Term(TMT6plex); K7(TMT6plex) 10 P20029 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q3U9G2; Q3U6V3; Q3TUS2; Q3UEM8; Q3U7T8; Q3TI47 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1 0 2 2 0.4146 0 1 1 1 608.88733 1216.76738 1216.76654 0.69 0.00042 0/0 0 0 87980824 HCD 30 MS2 57.54854 1099.6 15.032 65.5774 19421 19421 19416 QEplus033719.raw F4 1142.8 927.7 1197.1 932.1 1202.2 1195.6 446 2.87 1 FALSE 0.0003408 0.006532 0.467 -250 92271 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERLEQIK [R-].eRLEQIk.[K] N-Term(TMT6plex); K7(TMT6plex) 7 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1; Q3UEK3; Q6A0B9; Q3TKF9; Q3UL99; Q3UM46 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; MKIAA0139 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.0902 0 1 1 1 458.62274 1373.85367 1373.85167 1.46 0.00067 0/0 0 0 51234436 HCD 30 MS2 8.143381 614.1 29.727 65.5797 19422 19422 19416 QEplus033719.raw F4 621 513.9 751.4 484.5 677.5 636.1 502 2.66 1 FALSE 0.0007436 0.01057 0.395 -250 92295 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVNQFGNK [R].gVNQFGNk.[Y] N-Term(TMT6plex); K8(TMT6plex) 2 Q9CQF3 Cleavage and polyadenylation specificity factor subunit 5 OS=Mus musculus OX=10090 GN=Nudt21 PE=1 SV=1 Q9CZQ0; Q9CQF3 Cleavage and polyadenylation specificity factor subunit 5 OS=Mus musculus OX=10090 GN=Nudt21 PE=2 SV=1; Cleavage and polyadenylation specificity factor subunit 5 OS=Mus musculus OX=10090 GN=Nudt21 PE=1 SV=1 0 2 2 0.5034 0 1 1 1 661.38379 1321.7603 1321.76286 -1.93 -0.00128 0/0 0 0 28220158 HCD 30 MS2 17.76419 1000.5 51.577 65.5865 19425 19425 19416 QEplus033719.raw F4 1014.2 981.5 1087.9 735.1 1182.2 1002.1 421 2.92 1 FALSE 1.14E-05 0.0003569 0.751 -250 92303 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVTSATNALR [K].eVTSATNALR.[S] N-Term(TMT6plex) 3 Q62189 U1 small nuclear ribonucleoprotein A OS=Mus musculus OX=10090 GN=Snrpa PE=1 SV=3 Q9CXX7; Q62189; D3Z0S6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Snrpa PE=2 SV=1; U1 small nuclear ribonucleoprotein A OS=Mus musculus OX=10090 GN=Snrpa PE=1 SV=3; U1 small nuclear ribonucleoprotein A (Fragment) OS=Mus musculus OX=10090 GN=Snrpa PE=1 SV=1 0 2 2 0.5742 0 1 1 1 645.86487 1290.72246 1290.7215 0.75 0.00048 0/0 0 0 27546136 HCD 30 MS2 3.644556 1006.3 75.578 65.5888 19426 19426 19416 QEplus033719.raw F4 1067.9 940.3 1082.8 746.3 1156.2 1044 378 3.57 1 FALSE 1.14E-05 0.0002598 0.778 -250 92309 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAEMPATEK [-R].dAEMPATEk.[D] N-Term(TMT6plex); K9(TMT6plex) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" B7FAV1; F6XC15; B9EKP5; Q8BTM8-2; Q8BTM8; B7FAU9 "Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Isoform 2 of Filamin-A OS=Mus musculus OX=10090 GN=Flna; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.6621 0 1 1 1 725.38654 1449.76579 1449.76595 -0.11 -0.00008 0/0 0 0 36616156 HCD 30 MS2 18.50321 985.5 64.061 65.5961 19428 19428 19427 QEplus033719.raw F4 1006.7 882.8 982.9 627.9 1577.3 835.1 286 3.67 1 FALSE 1.14E-05 4.26E-06 1.118 -250 92313 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGVACSVSQAQK [R].tGVAcSVSQAQk.[DN] N-Term(TMT6plex); C5(Carbamidomethyl); K12(TMT6plex) 6 Q5EBQ6 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=1 A0A140T8T4; A0A0G2JES3; S4R1R7; D3Z629; Q5M9J5; Q5EBQ6 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9-ps6 PE=3 SV=1; 60S ribosomal protein L9 (Fragment) OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=1; 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9-ps1 PE=3 SV=1; 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=1; 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=2 SV=1; 60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=1 0 3 3 0.7297 0 1 1 1 565.31573 1693.93265 1693.93073 1.14 0.00064 0/0 0 0 25850212 HCD 30 MS2 4.388947 829.5 91.218 65.5984 19429 19429 19427 QEplus033719.raw F4 911.6 593.1 837.5 662.7 1076.6 895.6 432 5.66 1 FALSE 1.14E-05 1.02E-11 2.185 -250 92319 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGENADSQIK [K].vGENADSQIk.[L] N-Term(TMT6plex); K10(TMT6plex) 3 Q3U4Y0 H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f0 PE=2 SV=1 Q3U4Y0; Q8C1Y3; P10922 H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f0 PE=2 SV=1; H15 domain-containing protein OS=Mus musculus OX=10090 GN=H1f0 PE=2 SV=1; Histone H1.0 OS=Mus musculus OX=10090 GN=H1-0 PE=2 SV=4 0 3 3 0.594 0 1 1 1 506.95642 1518.85471 1518.85279 1.26 0.00064 0/0 0 0 126938936 HCD 30 MS2 19.29948 590.4 12.693 65.6006 19430 19430 19427 QEplus033719.raw F4 505.3 620.2 692.2 515.7 614.7 594.3 459 3.35 1 FALSE 1.14E-05 8.19E-06 1.064 -250 92323 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLGQPHHELDSK [K].vLGQPHHELDSk.[T] N-Term(TMT6plex); K12(TMT6plex) 7 Q920Q6 RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1 Q920Q6-3; Q920Q6-2; Q32LZ4; Q8CD63; Q920Q6; B1AT10; B1AT13 Isoform 3 of RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2; Isoform 2 of RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2; Msi2h protein OS=Mus musculus OX=10090 GN=Msi2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1; RNA-binding protein Musashi homolog 2 (Fragment) OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1; RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1 0 4 4 0.5234 0 1 1 1 455.26254 1818.02834 1818.0274 0.52 0.00023 0/0 0 0 14494181 HCD 30 MS2 21.58788 748.7 110 65.6031 19431 19431 19427 QEplus033719.raw F4 806.1 563.2 788.8 713.4 810.6 810.1 493 5.12 1 FALSE 1.14E-05 6.36E-06 1.085 -250 92331 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAMGEEYK [K].aAMGEEYk.[A] N-Term(TMT6plex); K8(TMT6plex) 4 Q4FJZ4 T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1 Q4FJZ4; Q3UDG2; Q3U6U7; P32921 "T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; Tryptophan--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Wars1 PE=1 SV=2" 0 2 2 0.5162 0 1 1 1 678.86615 1356.72502 1356.72336 1.23 0.00083 0/0 0 0 13161614 HCD 30 MS2 35.8812 975.9 110 65.6056 19432 19432 19427 QEplus033719.raw F4 937.2 882.1 1084.8 844.2 1039.8 1067.2 202 3.39 1 FALSE 1.14E-05 0.000129 0.836 -250 92339 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPTDTASVQNEAK [K].kPTDTASVQNEAk.[L] N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex) 5 Q3TF74 Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1 Q3TF74; Q5PPQ7; Q3TEU8; Q9WUM4; Q3U8F0 Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin-1C OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1 0 4 4 0.5903 0 1 1 1 519.80304 2076.19033 2076.19039 -0.03 -0.00002 0/0 0 0 6580328 HCD 30 MS2 18.89887 617.8 110 65.6081 19433 19433 19427 QEplus033719.raw F4 618.8 552.1 658 475.8 751.1 650.8 438 4.93 1 FALSE 1.14E-05 2.34E-06 1.167 -250 92344 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEPAAPQAPAK [K].aEPAAPQAPAk.[S] N-Term(TMT6plex); K11(TMT6plex) 1 Q8CI43 Myosin light chain 6B OS=Mus musculus OX=10090 GN=Myl6b PE=1 SV=1 Q8CI43 Myosin light chain 6B OS=Mus musculus OX=10090 GN=Myl6b PE=1 SV=1 0 2 2 0.5459 0 1 1 1 754.94653 1508.88579 1508.8837 1.39 0.00105 0/0 0 0 11987617 HCD 30 MS2 14.42712 519.1 110 65.6107 19434 19434 19427 QEplus033719.raw F4 676.7 131.6 419.4 879.6 195.8 811.4 384 4.03 1 FALSE 1.14E-05 4.93E-09 1.675 -250 92354 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTVVPTK [R].nTVVPTk.[K] N-Term(TMT6plex); K7(TMT6plex) 10 P20029 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q3U9G2; Q3U6V3; Q3TUS2; Q3UEM8; Q3U7T8; Q3TI47 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1 0 3 3 0.3508 0 1 1 1 406.26071 1216.76758 1216.76654 0.85 0.00035 0/0 0 0 10916818 HCD 30 MS2 33.4736 639.8 69.821 65.6154 19436 19436 19427 QEplus033719.raw F4 618.3 594.9 684.8 512.4 739.7 688.9 446 2.48 1 FALSE 0.002182 0.04193 0.168 -250 92364 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEPGGAGADGVPGK [K].gEPGGAGADGVPGk.[D] N-Term(TMT6plex); K14(TMT6plex) 8 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; A0A087WPS3; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen alpha-1(III) chain (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 2 2 0.7522 0 1 1 1 813.94739 1626.8875 1626.88516 1.44 0.00117 0/0 0 0 10022962 HCD 30 MS2 8.106083 443.9 110 65.6179 19437 19437 19427 QEplus033719.raw F4 365 533.3 546.7 294.9 450 473.7 344 3.47 1 FALSE 1.14E-05 1.25E-13 2.548 -250 92382 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLVGPELHDR [K].gLVGPELHDR.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.7164 0 1 1 1 441.25211 1321.74176 1321.74256 -0.61 -0.00027 0/0 0 0 95444392 HCD 30 MS2 25.81902 327.1 10.614 65.6299 19441 19441 19438 QEplus033719.raw F4 320.2 289.5 410 227.4 335.9 379.6 428 4.02 2 FALSE 1.14E-05 3.05E-08 1.525 -250 92389 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KIGVNQPK [K].kIGVNQPk.[R] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 2 Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 Q9JJD8; Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=2 SV=1; CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 1 3 3 0.6467 0 1 1 1 524.34686 1571.02604 1571.02477 0.8 0.00042 0/0 0 0 25754412 HCD 30 MS2 20.57151 1388.5 76.406 65.6322 19442 19442 19438 QEplus033719.raw F4 1592.1 1178.2 1486.8 1103.1 1493.1 1477.9 137 3.34 1 FALSE 1.14E-05 1.03E-05 1.045 -250 92397 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPQMAVK [K].gPQMAVk.[G] N-Term(TMT6plex); K7(TMT6plex) 3 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 Q6UL10; E9Q616; Q61484 AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; Desmoyokin (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1 0 2 2 0.4215 0 1 1 1 594.8631 1188.71892 1188.71749 1.21 0.00072 0/0 0 0 25492792 HCD 30 MS2 21.49429 1416.3 68.438 65.6345 19443 19443 19438 QEplus033719.raw F4 1516.7 1418.2 1438.9 1034.6 1827.1 1262.5 340 2.42 1 FALSE 0.0008718 0.01204 0.373 -250 92425 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSVSNLEK [R].qSVSNLEk.[K] N-Term(TMT6plex); K8(TMT6plex) 4 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 0 2 2 0.3333 0 1 1 1 681.90442 1362.80156 1362.7993 1.66 0.00113 0/0 0 0 13506066 HCD 30 MS2 6.804296 1071.9 110 65.6441 19447 19447 19438 QEplus033719.raw F4 1186.9 1120.4 1173.4 755.8 1262.3 932.3 467 3.33 1 FALSE 1.14E-05 0.000113 0.847 -250 92443 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAFGKPQGTVAR [R].gAFGkPQGTVAR.[V] N-Term(TMT6plex); K5(TMT6plex) 4 A2AM97 Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1 P86048; I7HLV2; Q3THJ6; A2AM97 60S ribosomal protein L10-like OS=Mus musculus OX=10090 GN=Rpl10l PE=2 SV=1; 60S ribosomal protein L10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=1 SV=1; Ribosomal_L16 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1 0 2 2 0.5479 0 1 1 1 823.9917 1646.97612 1646.97425 1.14 0.00094 0/0 0 0 11980156 HCD 30 MS2 16.69079 446.4 110 65.6537 19450 19450 19449 QEplus033719.raw F4 447.9 344.7 473 431.5 418.5 563.1 426 3.34 1 FALSE 1.14E-05 2.52E-08 1.541 -250 92451 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDVSEDEPSLGR [R].gDVSEDEPSLGR.[L] N-Term(TMT6plex) 6 Q9D0L8 mRNA cap guanine-N7 methyltransferase OS=Mus musculus OX=10090 GN=Rnmt PE=1 SV=1 Q9D0L8-2; D3YYS7; D3Z4K1; Q9D0L8; Q9D0L8-3; D3Z478 Isoform 2 of mRNA cap guanine-N7 methyltransferase OS=Mus musculus OX=10090 GN=Rnmt; mRNA (guanine-N(7)-)-methyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Rnmt PE=1 SV=1; mRNA cap guanine-N7 methyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Rnmt PE=1 SV=1; mRNA cap guanine-N7 methyltransferase OS=Mus musculus OX=10090 GN=Rnmt PE=1 SV=1; Isoform 3 of mRNA cap guanine-N7 methyltransferase OS=Mus musculus OX=10090 GN=Rnmt; mRNA (guanine-N(7)-)-methyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Rnmt PE=1 SV=1 0 2 2 0.7147 0 1 1 1 745.36975 1489.73223 1489.73318 -0.64 -0.00048 0/0 0 0 3594319.25 HCD 30 MS2 0 222.4 110 65.6562 19451 19451 19449 QEplus033719.raw F4 227.1 203.5 234.9 197.3 232.2 239.6 101 3.54 1 FALSE 1.14E-05 6.69E-11 2.03 -250 92467 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RKLEGDLK [K].rkLEGDLk.[LM] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 14 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; B2RWX0; B2RQQ1; I6L963; B1AR69; B2RY26; A2AQP0; B2RXX9; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-7B OS=Mus musculus OX=10090 GN=Myh7b PE=3 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 2 4 4 0.4583 0 1 1 1 412.26993 1646.05788 1646.0568 0.66 0.00027 0/0 0 0 105959736 HCD 30 MS2 13.43733 801.5 15.87 65.6607 19453 19453 19449 QEplus033719.raw F4 737.8 152.4 632 1606.1 153.1 1527.4 216 2.88 5 FALSE 0.008027 0.1338 -0.065 -250 92471 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEDPDGK [R].lEDPDGk.[V] N-Term(TMT6plex); K7(TMT6plex) 2 D3YZZ5 Transmembrane p24-trafficking protein 7 OS=Mus musculus OX=10090 GN=Tmed7 PE=1 SV=1 E9Q7G1; D3YZZ5 Transmembrane p24-trafficking protein 7 OS=Mus musculus OX=10090 GN=Tmed7 PE=1 SV=1; Transmembrane p24-trafficking protein 7 OS=Mus musculus OX=10090 GN=Tmed7 PE=1 SV=1 0 2 2 0.4557 0 1 1 1 616.35126 1231.69524 1231.69344 1.46 0.0009 0/0 0 0 41371724 HCD 30 MS2 32.66574 889.1 35.738 65.663 19454 19454 19449 QEplus033719.raw F4 838.4 740.1 946.2 860.7 918.3 1030.8 423 2.37 1 FALSE 0.002636 0.05249 0.135 -250 92481 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFTENPK [K].kFTENPk.[A] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 1 Q61425 "Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Hadh PE=1 SV=2" Q61425 "Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Hadh PE=1 SV=2" 1 3 3 0.3632 0 1 1 1 517.65601 1550.95346 1550.95094 1.63 0.00084 0/0 0 0 15691628 HCD 30 MS2 63.62344 1195 43.029 65.6652 19455 19455 19449 QEplus033719.raw F4 1405.6 807 1212.9 1258.3 1284.4 1201.5 302 1.9 1 FALSE 0.001778 0.03036 0.215 -250 92490 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSLVIK [R].hSLVIk.[S] N-Term(TMT6plex); K6(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; Q3TZL3; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.3771 0 1 1 1 385.59378 1154.76679 1154.76615 0.55 0.00021 0/0 0 0 9105738 HCD 30 MS2 5.015149 463.1 110 65.6677 19456 19456 19449 QEplus033719.raw F4 560.3 155.8 383.2 728.8 232.9 717.4 51 2.97 2 FALSE 0.001658 0.02708 0.232 -250 92497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVSVEEAK [R].qVSVEEAk.[N] N-Term(TMT6plex); K8(TMT6plex) 2 Q9CXY0 Small monomeric GTPase OS=Mus musculus OX=10090 GN=Rala PE=2 SV=1 Q9CXY0; P63321 Small monomeric GTPase OS=Mus musculus OX=10090 GN=Rala PE=2 SV=1; Ras-related protein Ral-A OS=Mus musculus OX=10090 GN=Rala PE=1 SV=1 0 2 2 0.2667 0 1 1 1 674.39948 1347.79167 1347.7884 2.43 0.00164 0/0 0 0 8006831 HCD 30 MS2 0 641.2 110 65.6702 19457 19457 19449 QEplus033719.raw F4 612.4 580.5 710.2 637.5 640.7 666 502 3.3 1 FALSE 1.14E-05 9.79E-05 0.859 -250 92503 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEATDADDPETDNAALR [R].aEATDADDPETDNAALR.[F] N-Term(TMT6plex) 1 P33146 Cadherin-15 OS=Mus musculus OX=10090 GN=Cdh15 PE=1 SV=3 P33146 Cadherin-15 OS=Mus musculus OX=10090 GN=Cdh15 PE=1 SV=3 0 3 3 0.8501 0 1 1 1 668.65057 2003.93717 2003.93552 0.82 0.00055 0/0 0 0 4284416 HCD 30 MS2 35.23016 461.1 110 65.6727 19458 19458 19449 QEplus033719.raw F4 462.9 368 535.2 384.3 506.1 510.1 74 4.47 1 FALSE 1.14E-05 1.64E-08 1.576 -250 92515 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQNTWGCGSSLR [K].aQNTWGcGSSLR.[T] N-Term(TMT6plex); C7(Carbamidomethyl) 4 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; Q9CTL2; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; LTD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Lmna PE=2 SV=1; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 0 2 2 0.7967 0 1 1 1 783.38861 1565.76995 1565.76919 0.48 0.00038 0/0 0 0 11727616 HCD 30 MS2 0 356.4 110 65.6826 19461 19461 19460 QEplus033719.raw F4 344.2 348.2 404.9 270.8 434.3 336.1 135 4.23 1 FALSE 1.14E-05 3.35E-10 1.897 -250 92529 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELEVQHPAAK [R].eLEVQHPAAk.[M] N-Term(TMT6plex); K10(TMT6plex) 9 Q6A0F1 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1 Q9CS06; Q8BVY8; H3BKG2; Q3UKQ2; Q6A0F1; H3BL49; P42932; Q9WVS5; H3BLL1 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; T-complex protein 1 subunit theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1; T-complex protein 1 subunit theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=3; CCT-theta OS=Mus musculus OX=10090 GN=Cctq PE=3 SV=1; T-complex protein 1 subunit theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1 0 3 3 0.7054 0 1 1 1 527.31244 1579.92276 1579.92081 1.23 0.00065 0/0 0 0 117037936 HCD 30 MS2 5.383969 728.4 17.905 65.6874 19463 19463 19460 QEplus033719.raw F4 793.3 619.4 810 621.6 769.2 757.1 446 3.53 1 FALSE 1.14E-05 3.44E-05 0.946 -250 92535 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPASPVVHIR [K].tPASPVVHIR.[G] N-Term(TMT6plex) 4 G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 Q8R081; Q8BI42; Q3UMT7; G5E924 Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 0 3 3 0.6388 0 1 1 1 435.93298 1305.7844 1305.78404 0.28 0.00012 0/0 0 0 76499112 HCD 30 MS2 11.23473 291.8 14.688 65.6896 19464 19464 19460 QEplus033719.raw F4 289.5 217.9 374.3 244.8 267.3 357 398 4.9 1 FALSE 1.14E-05 2.30E-07 1.359 -250 92541 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IKPEIHPEER [K].ikPEIHPEER.[M] N-Term(TMT6plex); K2(TMT6plex) 6 Q3U1S6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1 Q3U1S6; Q8JZN2; Q8R3R1; Q3U4S7; Q3TXH7; Q80TP8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Csde1 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; MKIAA0885 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1 0 4 4 0.729 0 1 1 1 427.25623 1706.00307 1706.00013 1.73 0.00074 0/0 0 0 33786680 HCD 30 MS2 34.07927 453.1 33.064 65.6919 19465 19465 19460 QEplus033719.raw F4 444.7 341.6 529.6 337 448.5 617.5 425 4.28 1 FALSE 1.14E-05 7.05E-05 0.886 -250 92548 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLWTQSR [K].sLWTQSR.[N] N-Term(TMT6plex) 5 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q8CD09; Q9ERG0; Q8C7S2; Q8C3R7; Q8BT15 LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 0 2 2 0.3968 0 1 1 1 553.81207 1106.61687 1106.61557 1.17 0.00065 0/0 0 0 33341166 HCD 30 MS2 46.64874 1072.8 30.122 65.6941 19466 19466 19460 QEplus033719.raw F4 1028.7 939.3 1202 841.3 1318.5 1107.3 226 2.52 1 FALSE 0.0002909 0.005912 0.48 -250 92583 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YPNPEEGK [K].yPNPEEGk.[G] N-Term(TMT6plex); K8(TMT6plex) 1 Q7TSV4 Phosphoglucomutase-2 OS=Mus musculus OX=10090 GN=Pgm2 PE=1 SV=1 Q7TSV4 Phosphoglucomutase-2 OS=Mus musculus OX=10090 GN=Pgm2 PE=1 SV=1 0 2 2 0.6759 0 1 1 1 696.38403 1391.76079 1391.7571 2.65 0.00184 0/0 0 0 4776302.5 HCD 30 MS2 0 394.4 110 65.7041 19470 19470 19460 QEplus033719.raw F4 375.3 375.2 441.7 318 453.4 402.8 404 2.9 1 FALSE 1.14E-05 9.09E-05 0.865 -250 92600 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCIPTMAR [R].gcIPTMAR.[A] N-Term(TMT6plex); C2(Carbamidomethyl) 3 Q5SX53 Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc25a11 PE=1 SV=1 Q5SX53; Q5SX46; Q9CTC7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc25a11 PE=1 SV=1; Mitochondrial 2-oxoglutarate/malate carrier protein (Fragment) OS=Mus musculus OX=10090 GN=Slc25a11 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Slc25a11 PE=2 SV=1 0 2 2 0.3607 0 1 1 1 567.80096 1134.59465 1134.5961 -1.28 -0.00072 0/0 0 0 41710432 HCD 30 MS2 42.2671 774.2 31.74 65.7137 19473 19473 19471 QEplus033719.raw F4 681.3 650.8 859.8 759.7 844.3 849.3 209 2.19 1 FALSE 0.0003996 0.007123 0.456 -250 92607 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LHEEGVIYR [R].lHEEGVIYR.[S] N-Term(TMT6plex) 5 Q7TPT7 Valyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1 Q3U3D3; G3UY93; Q3TII4; Q7TPT7; Q9Z1Q9 Valyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1; Valyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Vars PE=1 SV=1; Valyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1; Valyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1; Valine--tRNA ligase OS=Mus musculus OX=10090 GN=Vars1 PE=1 SV=1 0 3 3 0.6883 0 1 1 1 448.92072 1344.74759 1344.74732 0.21 0.00009 0/0 0 0 31492034 HCD 30 MS2 15.05482 423.9 41.481 65.716 19474 19474 19471 QEplus033719.raw F4 384.1 328.6 467.4 374.2 346.2 643 342 4.46 1 FALSE 1.14E-05 8.98E-06 1.056 -250 92616 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQEGSQFVK [K].sQEGSQFVk.[G] N-Term(TMT6plex); K9(TMT6plex) 6 Q3TDF8 Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus OX=10090 GN=Etf1 PE=2 SV=1 Q3TDF8; Q3TL10; Q3U6V5; Q3TF02; P70199; Q8BWY3 Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus OX=10090 GN=Etf1 PE=2 SV=1; Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus OX=10090 GN=Etf1 PE=2 SV=1; Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus OX=10090 GN=Etf1 PE=2 SV=1; Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus OX=10090 GN=Etf1 PE=2 SV=1; ERF1 (Fragment) OS=Mus musculus OX=10090 GN=Etf1 PE=2 SV=1; Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus OX=10090 GN=Etf1 PE=1 SV=4 0 2 2 0.4647 0 1 1 1 734.41492 1467.82256 1467.82076 1.22 0.0009 0/0 0 0 28433504 HCD 30 MS2 61.42809 916.6 62.499 65.7182 19475 19475 19471 QEplus033719.raw F4 927 796.6 1015.2 719.4 1064.9 976.7 340 3.12 1 FALSE 1.14E-05 3.14E-06 1.143 -250 92623 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFASPGQQKK [R].eFASPGQQkk.[E] N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex) 5 D3Z0I8 Transmembrane protein 109 (Fragment) OS=Mus musculus OX=10090 GN=Tmem109 PE=1 SV=1 D3Z0I8; D3YX08; D3Z3Z2; D3Z7P2; Q3UBX0 Transmembrane protein 109 (Fragment) OS=Mus musculus OX=10090 GN=Tmem109 PE=1 SV=1; Transmembrane protein 109 OS=Mus musculus OX=10090 GN=Tmem109 PE=1 SV=1; Transmembrane protein 109 (Fragment) OS=Mus musculus OX=10090 GN=Tmem109 PE=1 SV=1; Transmembrane protein 109 (Fragment) OS=Mus musculus OX=10090 GN=Tmem109 PE=1 SV=1; Transmembrane protein 109 OS=Mus musculus OX=10090 GN=Tmem109 PE=1 SV=2 1 3 3 0.5106 0 1 1 1 603.02844 1807.07077 1807.06809 1.48 0.00089 0/0 0 0 26960668 HCD 30 MS2 46.3748 1483.8 66.34 65.7205 19476 19476 19471 QEplus033719.raw F4 1534.4 1259.6 1695.7 1392.6 1495.9 1524.5 386 2.84 1 FALSE 3.35E-05 0.001157 0.649 -250 92638 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQDASLNVPER [R].aQDASLNVPER.[A] N-Term(TMT6plex) 2 Q7TPV4 Myb-binding protein 1A OS=Mus musculus OX=10090 GN=Mybbp1a PE=1 SV=2 A0JLT5; Q7TPV4 Mybbp1a protein (Fragment) OS=Mus musculus OX=10090 GN=Mybbp1a PE=2 SV=1; Myb-binding protein 1A OS=Mus musculus OX=10090 GN=Mybbp1a PE=1 SV=2 0 2 2 0.7071 0 1 1 1 714.88641 1428.76555 1428.76442 0.79 0.00056 0/0 0 0 8119291 HCD 30 MS2 0 421.3 110 65.7278 19479 19479 19471 QEplus033719.raw F4 396.3 408.5 483.9 335 450.7 453.5 267 3.38 1 FALSE 1.14E-05 9.90E-08 1.428 -250 92642 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTGASFEK [R].tTGASFEk.[A] N-Term(TMT6plex); K8(TMT6plex) 4 Q3UY11 Secretory carrier-associated membrane protein OS=Mus musculus OX=10090 GN=Scamp1 PE=2 SV=1 Q3UY11; Q3TSA8; Q9D577; Q3TD71 Secretory carrier-associated membrane protein OS=Mus musculus OX=10090 GN=Scamp1 PE=2 SV=1; Secretory carrier-associated membrane protein OS=Mus musculus OX=10090 GN=Scamp1 PE=1 SV=1; Secretory carrier-associated membrane protein OS=Mus musculus OX=10090 GN=Scamp1 PE=2 SV=1; Secretory carrier-associated membrane protein OS=Mus musculus OX=10090 GN=Scamp1 PE=1 SV=1 0 2 2 0.5404 0 1 1 1 649.87177 1298.73625 1298.73564 0.47 0.00031 0/0 0 0 4830173.5 HCD 30 MS2 52.54325 1002.1 110 65.7303 19480 19480 19471 QEplus033719.raw F4 949.4 776.9 1076.3 1014.5 947.8 1247.7 323 2.72 1 FALSE 1.14E-05 0.0001752 0.81 -250 92651 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAHLCAEAALR [K].aAHLcAEAALR.[L] N-Term(TMT6plex); C5(Carbamidomethyl) 4 Q3TGU7 Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=1 Q3TGU7; Q05BN2; P50580-2; Q3UMW2 Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=1; Pa2g4 protein (Fragment) OS=Mus musculus OX=10090 GN=Pa2g4 PE=2 SV=1; Isoform 2 of Proliferation-associated protein 2G4 OS=Mus musculus OX=10090 GN=Pa2g4; Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=2 SV=1 0 2 2 0.7079 0 1 1 1 706.39056 1411.77385 1411.76773 4.33 0.00306 0/0 0 0 4781780.5 HCD 30 MS2 0 443.8 110 65.7328 19481 19481 19471 QEplus033719.raw F4 467.3 344.3 447.3 272.2 597.4 534.4 303 4.04 1 FALSE 1.14E-05 2.05E-08 1.558 -250 92658 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGDGQINEQVEK [R].gGDGQINEQVEk.[L] N-Term(TMT6plex); K12(TMT6plex) 2 Q9R0A0 Peroxisomal membrane protein PEX14 OS=Mus musculus OX=10090 GN=Pex14 PE=1 SV=1 Q9R0A0; Q9QX52 Peroxisomal membrane protein PEX14 OS=Mus musculus OX=10090 GN=Pex14 PE=1 SV=1; Peroxin-14 (Fragment) OS=Mus musculus OX=10090 GN=Pex14 PE=3 SV=1 0 2 2 0.7057 0 1 1 1 866.4671 1731.92693 1731.92775 -0.47 -0.00041 0/0 0 0 2243210.5 HCD 30 MS2 0 217.5 110 65.7401 19483 19483 19482 QEplus033719.raw F4 212.9 188.1 246.4 196.2 232.6 228.7 408 4.35 1 FALSE 1.14E-05 4.16E-12 2.259 -250 92671 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SELVQK [K].sELVQk.[A] N-Term(TMT6plex); K6(TMT6plex) 3 Q9CQV8 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3 Q9CQV8-2; Q9CQV8; A2A5N1 Isoform Short of 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab; 14-3-3 protein beta/alpha OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=3; 14-3-3 protein beta/alpha (Fragment) OS=Mus musculus OX=10090 GN=Ywhab PE=1 SV=1 0 2 2 0.0995 0 1 1 1 581.36664 1161.726 1161.72434 1.42 0.00083 0/0 0 0 43710180 HCD 30 MS2 32.24233 1114.3 24.301 65.7447 19485 19485 19482 QEplus033719.raw F4 1288.7 869 1086.7 946.7 1463.3 1031.6 516 2.11 1 FALSE 0.005324 0.0912 0.031 -250 92680 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAHLCAEAALR [K].aAHLcAEAALR.[L] N-Term(TMT6plex); C5(Carbamidomethyl) 4 Q3TGU7 Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=1 Q3TGU7; Q05BN2; P50580-2; Q3UMW2 Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=1; Pa2g4 protein (Fragment) OS=Mus musculus OX=10090 GN=Pa2g4 PE=2 SV=1; Isoform 2 of Proliferation-associated protein 2G4 OS=Mus musculus OX=10090 GN=Pa2g4; Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=2 SV=1 0 3 3 0.7835 0 1 1 1 471.2612 1411.76905 1411.76773 0.93 0.00044 0/0 0 0 43088248 HCD 30 MS2 28.1419 511 42.039 65.7469 19486 19486 19482 QEplus033719.raw F4 512.9 334.6 600.2 408.7 495.3 714.1 274 4.11 1 FALSE 1.14E-05 2.94E-08 1.528 -250 92692 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSDPVLK [R].gSDPVLk.[L] N-Term(TMT6plex); K7(TMT6plex) 2 Q9ERR7 Selenoprotein F OS=Mus musculus OX=10090 GN=Selenof PE=1 SV=3 Q9ERR7; A0A0R4J0K1 Selenoprotein F OS=Mus musculus OX=10090 GN=Selenof PE=1 SV=3; Selenoprotein F OS=Mus musculus OX=10090 GN=Selenof PE=1 SV=1 0 2 2 0.4802 0 1 1 1 587.36664 1173.726 1173.72434 1.41 0.00083 0/0 0 0 19052616 HCD 30 MS2 33.33764 1602.9 110 65.7517 19488 19488 19482 QEplus033719.raw F4 1612.4 1486.4 1768.2 1285.7 1811 1653.6 435 2.02 1 FALSE 0.001567 0.02386 0.252 -250 92695 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMSDVAQEK [K].gMSDVAQEk.[N] N-Term(TMT6plex); K9(TMT6plex) 1 Q9JJ28 Protein flightless-1 homolog OS=Mus musculus OX=10090 GN=Flii PE=1 SV=1 Q9JJ28 Protein flightless-1 homolog OS=Mus musculus OX=10090 GN=Flii PE=1 SV=1 0 2 2 0.2762 0 1 1 1 711.88745 1422.76763 1422.76629 0.94 0.00067 0/0 0 0 10995402 HCD 30 MS2 26.88798 777 110 65.7542 19489 19489 19482 QEplus033719.raw F4 798.6 617.2 862.5 683.5 805.4 894.5 371 2.1 1 FALSE 1.14E-05 0.0002418 0.784 -250 92710 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVSAIVQK [K].aVSAIVQk.[V] N-Term(TMT6plex); K8(TMT6plex) 2 A0A1W2P872 NOVA alternative-splicing regulator 2 OS=Mus musculus OX=10090 GN=Nova2 PE=1 SV=1 A0A1W2P872; D3YVV7 NOVA alternative-splicing regulator 2 OS=Mus musculus OX=10090 GN=Nova2 PE=1 SV=1; NOVA alternative-splicing regulator 2 OS=Mus musculus OX=10090 GN=Nova2 PE=1 SV=3 0 2 2 0.2776 0 1 1 1 637.41608 1273.82488 1273.82439 0.38 0.00024 0/0 0 0 10091612 HCD 30 MS2 11.55811 1068.1 110 65.7592 19491 19491 19482 QEplus033719.raw F4 1195.7 1004.7 1003.8 752.7 1516.6 935 213 2.63 1 FALSE 0.002293 0.04501 0.157 -250 92720 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WNTEDK [K].wNTEDk.[V] N-Term(TMT6plex); K6(TMT6plex) 1 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 0 3 3 0.2891 0 1 1 1 417.56476 1250.67972 1250.67812 1.28 0.00053 0/0 0 0 9832536 HCD 30 MS2 48.98986 750.1 110 65.7617 19492 19492 19482 QEplus033719.raw F4 765.1 579.8 736.9 666.1 737.2 1015.5 307 2.56 1 FALSE 0.007155 0.1125 -0.026 -250 92742 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSVSNLEK [R].qSVSNLEk.[K] N-Term(TMT6plex); K8(TMT6plex) 4 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 0 3 3 0.3273 0 1 1 1 454.93857 1362.80115 1362.7993 1.36 0.00062 0/0 0 0 66957068 HCD 30 MS2 34.71303 598.2 18.955 65.7738 19496 19496 19493 QEplus033719.raw F4 587.5 584.7 606.9 441.8 797.6 570.5 478 3.3 1 FALSE 0.000108 0.003032 0.557 -250 92755 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVVDPTK [K].eVVDPTk.[C] N-Term(TMT6plex); K7(TMT6plex) 1 P12763 SWISS-PROT:P12763 (Bos taurus) Alpha-2-HS-glycoprotein precursor P12763 SWISS-PROT:P12763 (Bos taurus) Alpha-2-HS-glycoprotein precursor 0 2 2 0.5772 0 1 1 1 623.37732 1245.74736 1245.74547 1.52 0.00094 0/0 0 0 30736846 HCD 30 MS2 3.990911 1339.6 68.043 65.7805 19499 19499 19493 QEplus033719.raw F4 1506.7 462.8 529.4 321.6 4820 396.9 467 2.72 1 TRUE 0.0005556 0.008436 0.431 -250 92759 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECPAIDYTR [K].ecPAIDYTR.[H] N-Term(TMT6plex); C2(Carbamidomethyl) 5 Q6PEB6 MOB-like protein phocein OS=Mus musculus OX=10090 GN=Mob4 PE=1 SV=1 G8JL35; Q6PEB6; E0CXA9; E0CYJ0; Q3UGM5 MOB-like protein phocein (Fragment) OS=Mus musculus OX=10090 GN=Mob4 PE=1 SV=1; MOB-like protein phocein OS=Mus musculus OX=10090 GN=Mob4 PE=1 SV=1; MOB-like protein phocein OS=Mus musculus OX=10090 GN=Mob4 PE=1 SV=1; MOB-like protein phocein (Fragment) OS=Mus musculus OX=10090 GN=Mob4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mob4 PE=2 SV=1 0 2 2 0.6824 0 1 1 1 677.33771 1353.66814 1353.66702 0.83 0.00056 0/0 0 0 19286812 HCD 30 MS2 7.47986 747.5 110 65.7831 19500 19500 19493 QEplus033719.raw F4 777.4 607 787.5 656 793.3 863.8 115 3.18 1 FALSE 1.14E-05 8.96E-06 1.056 -250 92766 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELEVQHPAAK [R].eLEVQHPAAk.[M] N-Term(TMT6plex); K10(TMT6plex) 9 Q6A0F1 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1 Q9CS06; Q8BVY8; H3BKG2; Q3UKQ2; Q6A0F1; H3BL49; P42932; Q9WVS5; H3BLL1 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; T-complex protein 1 subunit theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1; T-complex protein 1 subunit theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=3; CCT-theta OS=Mus musculus OX=10090 GN=Cctq PE=3 SV=1; T-complex protein 1 subunit theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1 0 2 2 0.5608 0 1 1 1 790.46582 1579.92436 1579.92081 2.25 0.00178 0/0 0 0 6853221.5 HCD 30 MS2 14.13862 319.5 110 65.7903 19503 19503 19493 QEplus033719.raw F4 331.1 291.5 355.2 246.6 357.2 335.3 460 4.03 1 FALSE 1.14E-05 7.28E-09 1.643 -250 92772 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVCDIPPR [K].tAVcDIPPR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 9 Q7TMM9; P99024; P68372; Q9CWF2 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1 Q7TMM9; Q9D6F9; Q62363; Q80ZV2; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2 "Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Beta-tubulin gene M-beta-2, 3' end (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1" 0 2 2 0.704 0 1 1 1 629.34595 1257.68462 1257.68227 1.86 0.00117 0/0 0 0 90450168 HCD 30 MS2 14.6085 874.6 24.473 65.7977 19505 19505 19504 QEplus033719.raw F4 874.1 750.9 942.2 652.9 1075.7 952.1 230 2.77 4 FALSE 1.14E-05 7.11E-05 0.885 -250 92787 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAEELEK [R].dAEELEk.[W] N-Term(TMT6plex); K7(TMT6plex) 12 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" Q3URW8; B9EKJ1; E9Q447; A3KGU4; B2RXX6; A3KGU9; Q3V1V5; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.1845 0 1 1 1 646.36194 1291.7166 1291.71457 1.57 0.00102 0/0 0 0 46671948 HCD 30 MS2 18.19938 989 43.754 65.8047 19508 19508 19504 QEplus033719.raw F4 1001.9 765 1181.3 790.9 1011.2 1183.9 380 2.71 2 FALSE 0.00079 0.01109 0.387 -250 92800 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IANPVEGSTDR [K].iANPVEGSTDR.[Q] N-Term(TMT6plex) 11 A0A2R8W6U6; Q61990 Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1;Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1 A0A2R8W6U6; Q61990; Q61990-3; A0A2R8VI25; Q3V486; B2M1R7; Q61990-2; Q3TT81; A0A2R8VI92; A0A2R8VHP9; A0A2R8W6H3 Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 3 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; KH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=2 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1 0 2 2 0.5923 0 1 1 1 694.37323 1387.73918 1387.73787 0.94 0.00065 0/0 0 0 27156824 HCD 30 MS2 0 643.1 75.899 65.8092 19510 19510 19504 QEplus033719.raw F4 644.6 648.8 698.4 474.2 756.8 635.6 270 3.9 2 FALSE 1.14E-05 6.59E-10 1.841 -250 92824 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECCHGDLLECADDR [K].eccHGDLLEcADDR.[A] N-Term(TMT6plex); C2(Carbamidomethyl); C3(Carbamidomethyl); C10(Carbamidomethyl) 2 P02769; Q546G4 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor;Serum albumin OS=Mus musculus OX=10090 GN=Alb PE=1 SV=1 P02769; Q546G4 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor; Serum albumin OS=Mus musculus OX=10090 GN=Alb PE=1 SV=1 0 3 3 0.8487 0 1 1 1 660.28058 1978.82718 1978.82546 0.87 0.00057 0/0 0 0 16588663 HCD 30 MS2 10.3672 613 110 65.8165 19513 19513 19504 QEplus033719.raw F4 609.3 485.9 646.8 508.1 799 628.9 3 4.89 2 TRUE 1.14E-05 1.30E-10 1.975 -250 92843 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFGNPGEK [K].kFGNPGEk.[L] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 11 Q5U222 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1 B1ARC0; Q3UXW3; Q5U222; S4R1E3; Q3V0Z8; B1ARB9; O35662; A1L333; S4R1I6; Q61656; Q8BTS0 RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=8; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=8; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Hlr1 PE=4 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 1 3 3 0.6436 0 1 1 1 521.9873 1563.94736 1563.94619 0.75 0.00039 0/0 0 0 31898272 HCD 30 MS2 45.17083 1459.6 56.945 65.8311 19518 19518 19515 QEplus033719.raw F4 1592.8 1233.6 1407.6 1240.4 1907.6 1375.4 413 3.62 1 FALSE 1.14E-05 0.0003588 0.75 -250 92849 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVVFIAQR [K].hVVFIAQR.[R] N-Term(TMT6plex) 1 Q4FZE6 40S ribosomal protein S7 OS=Mus musculus OX=10090 GN=Rps7 PE=2 SV=1 Q4FZE6 40S ribosomal protein S7 OS=Mus musculus OX=10090 GN=Rps7 PE=2 SV=1 0 3 3 0.5367 0 1 1 1 400.24658 1198.72519 1198.72579 -0.5 -0.0002 0/0 0 0 21036486 HCD 30 MS2 21.59571 435 48.412 65.8333 19519 19519 19515 QEplus033719.raw F4 525.6 279.8 469.8 377.1 361.4 596.6 244 3.41 1 FALSE 3.35E-05 0.00133 0.637 -250 92875 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQDLCQQEAVK [K].nQDLcQQEAVk.[A] N-Term(TMT6plex); C5(Carbamidomethyl); K11(TMT6plex) 2 Q921X9 Protein disulfide-isomerase A5 OS=Mus musculus OX=10090 GN=Pdia5 PE=1 SV=1 Q9CSM8; Q921X9 Thioredoxin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Pdia5 PE=2 SV=1; Protein disulfide-isomerase A5 OS=Mus musculus OX=10090 GN=Pdia5 PE=1 SV=1 0 3 3 0.6766 0 1 1 1 597.65424 1790.94815 1790.9471 0.59 0.00035 0/0 0 0 12331636 HCD 30 MS2 38.32761 999.5 86.071 65.8401 19522 19522 19515 QEplus033719.raw F4 1035.1 820.2 1059 845.2 1152.4 1084.8 301 3.37 1 FALSE 1.14E-05 8.48E-07 1.251 -250 92879 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LPNVHSK [R].lPNVHSk.[T] N-Term(TMT6plex); K7(TMT6plex) 1 Q8R010 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 OS=Mus musculus OX=10090 GN=Aimp2 PE=1 SV=2 Q8R010 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 OS=Mus musculus OX=10090 GN=Aimp2 PE=1 SV=2 0 3 3 0.3705 0 1 1 1 418.26465 1252.77939 1252.77778 1.29 0.00054 0/0 0 0 11407118 HCD 30 MS2 58.02808 984.3 91.996 65.8423 19523 19523 19515 QEplus033719.raw F4 922.6 983.5 1070 688.5 1023 1217.9 193 3.05 1 FALSE 0.001514 0.02283 0.259 -250 92895 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPTPPKQPAQPK [K].ePTPPkQPAQPk.[Q] N-Term(TMT6plex); K6(TMT6plex); K12(TMT6plex) 22 Q3U8C4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1 Q3TID4; K3W4L3; Q3TWF9; Q3U8C4; Q3UE29; Q3U825; Q8BFQ1; Q3TWL8; Q3TWM9; Q3TKK3; J3QPG5; Q3TIT5; Q3TXJ0; B2RUD7; Q3TXP9; Q3UFE8; Q3TWE9; Q3UAS4; Q3TKB2; Q3U5W2; Q3U897; E9PZ00 Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Prosaposin OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Prosaposin OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Prosaposin OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Psap protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psap PE=2 SV=1; Prosaposin OS=Mus musculus OX=10090 GN=Psap PE=1 SV=1 1 3 3 0.3865 0 1 1 1 669.07385 2005.207 2005.20492 1.04 0.00069 0/0 0 0 1996491.375 HCD 30 MS2 42.57771 431.1 110 65.8474 19525 19525 19515 QEplus033719.raw F4 464.7 355.6 458.3 412.7 421.3 474.3 320 2.07 1 FALSE 0.00484 0.08481 0.048 -250 92911 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFEDPRDAPPPTR [R].eFEDPRDAPPPTR.[A] N-Term(TMT6plex) 7 A2RS68 U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 A0A1B0GRR8; A0A1B0GRV8; A0A1B0GR69; A2RS68; Q9CR32; Q7TT81; Q6ZWP0 U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=3; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 1 3 3 0.6154 0 1 1 1 585.96741 1755.88767 1755.88633 0.76 0.00045 0/0 0 0 12992663 HCD 30 MS2 4.580195 640.3 110 65.8571 19528 19528 19526 QEplus033719.raw F4 625.5 562 710.2 490.7 721.5 731.9 196 2.6 1 FALSE 0.0004292 0.007475 0.449 -250 92919 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHEGCEEPATHNALAK [R].iHEGcEEPATHNALAk.[I] N-Term(TMT6plex); C5(Carbamidomethyl); K16(TMT6plex) 4 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 Q80U89; Q68FD5; Q5SXR6; Q3UPJ3 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1 0 4 4 0.7919 0 1 1 1 559.54565 2235.16079 2235.15922 0.7 0.00039 0/0 0 0 93093536 HCD 30 MS2 25.13051 590.3 17.946 65.8594 19529 19529 19526 QEplus033719.raw F4 637 455.4 647.2 541 591.5 669.4 337 6.68 1 FALSE 1.14E-05 2.19E-14 2.692 -250 92928 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCIPTMAR [R].gcIPTMAR.[A] N-Term(TMT6plex); C2(Carbamidomethyl) 3 Q5SX53 Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc25a11 PE=1 SV=1 Q5SX53; Q5SX46; Q9CTC7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc25a11 PE=1 SV=1; Mitochondrial 2-oxoglutarate/malate carrier protein (Fragment) OS=Mus musculus OX=10090 GN=Slc25a11 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Slc25a11 PE=2 SV=1 0 2 2 0.4383 0 1 1 1 567.79828 1134.58928 1134.5961 -6.01 -0.00341 0/0 0 0 27035222 HCD 30 MS2 44.70875 785 24.261 65.8617 19530 19530 19526 QEplus033719.raw F4 763 623.5 813.4 857.4 755.2 897.7 176 1.62 1 FALSE 0.007435 0.1209 -0.044 -250 92933 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MYHALK [R].mYHALk.[E] N-Term(TMT6plex); K6(TMT6plex) 20 Q3TCR7; P39053; P39054 Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1;Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=2;Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2 Q3TCR7; P39053; P39053-3; P39054; F6RRH9; F6TH70; A0A0J9YUN4; P39053-4; Q91Z39; P39054-2; G3X9G4; F8WIV5; Q3T9X3; F6W8Z8; A0A0J9YUS0; Q3TBU6; A0A0J9YUE9; P39053-5; G3UZZ3; P39053-6 Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=2; Isoform 3 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1; Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2; Dynamin-1 (Fragment) OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=2; Dynamin-1 (Fragment) OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=1; Isoform 4 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=2 SV=1; Isoform 2 of Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin-1 (Fragment) OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=1; Dynamin-1 (Fragment) OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=2 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=1; Isoform 5 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1; Dynamin GTPase (Fragment) OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Isoform 6 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1 0 3 3 0.3741 0 1 1 1 407.57965 1220.7244 1220.72257 1.5 0.00061 0/0 0 0 19321830 HCD 30 MS2 14.87459 783.5 82.579 65.8639 19531 19531 19526 QEplus033719.raw F4 711.1 657.9 922.9 635.3 869.8 903.7 421 2.86 3 FALSE 0.0006216 0.009189 0.418 -250 92939 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSNVGGTK [K].lSNVGGTk.[T] N-Term(TMT6plex); K8(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.1975 0 1 1 1 617.38251 1233.75774 1233.75671 0.84 0.00052 0/0 0 0 14495441 HCD 30 MS2 24.5631 1126 110 65.8664 19532 19532 19526 QEplus033719.raw F4 1182.7 670.3 1028.8 1614.3 863.1 1396.9 413 2.43 2 FALSE 1.14E-05 0.000247 0.782 -250 92949 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSEPEEVIPSR [K].nSEPEEVIPSR.[L] N-Term(TMT6plex) 2 Q91WQ3 "Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3" Q91WQ3; A2A7S7 "Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3; Tyrosine--tRNA ligase OS=Mus musculus OX=10090 GN=Yars PE=1 SV=1" 0 2 2 0.7582 0 1 1 1 743.39185 1485.77641 1485.77465 1.19 0.00088 0/0 0 0 11869031 HCD 30 MS2 0 335.9 110 65.8689 19533 19533 19526 QEplus033719.raw F4 347.7 268.4 369.9 308.6 337.6 383.1 236 3.97 1 FALSE 1.14E-05 3.87E-09 1.696 -250 92971 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVPETPDSK [K].eVPETPDSk.[R] N-Term(TMT6plex); K9(TMT6plex) 2 Q8BGC0 HIV Tat-specific factor 1 homolog OS=Mus musculus OX=10090 GN=Htatsf1 PE=1 SV=1 Q8BGC0-2; Q8BGC0 Isoform 2 of HIV Tat-specific factor 1 homolog OS=Mus musculus OX=10090 GN=Htatsf1; HIV Tat-specific factor 1 homolog OS=Mus musculus OX=10090 GN=Htatsf1 PE=1 SV=1 0 2 2 0.3994 0 1 1 1 730.40778 1459.80828 1459.80445 2.62 0.00191 0/0 0 0 5682252 HCD 30 MS2 15.84561 527.4 110 65.8762 19536 19536 19526 QEplus033719.raw F4 506.7 433.2 532.9 434.2 622.1 635.3 397 3.18 1 FALSE 1.14E-05 0.0003106 0.763 -250 92978 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYQGELK [R].nYQGELk.[K] N-Term(TMT6plex); K7(TMT6plex) 1 Q8K0D5 "Elongation factor G, mitochondrial OS=Mus musculus OX=10090 GN=Gfm1 PE=1 SV=1" Q8K0D5 "Elongation factor G, mitochondrial OS=Mus musculus OX=10090 GN=Gfm1 PE=1 SV=1" 0 2 2 0.1675 0 1 1 1 655.38129 1309.7553 1309.75162 2.81 0.00184 0/0 0 0 5025117.5 HCD 30 MS2 21.05191 596.7 110 65.8835 19538 19538 19537 QEplus033719.raw F4 571.3 491.3 679.9 542.1 638.3 657.4 371 1.91 1 FALSE 0.005357 0.09151 0.03 -250 92984 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDLEIQANGR [R].cDLEIQANGR.[D] N-Term(TMT6plex); C1(Carbamidomethyl) 2 P21981 Protein-glutamine gamma-glutamyltransferase 2 OS=Mus musculus OX=10090 GN=Tgm2 PE=1 SV=4 G3UXE8; P21981 Protein-glutamine gamma-glutamyltransferase 2 OS=Mus musculus OX=10090 GN=Tgm2 PE=1 SV=1; Protein-glutamine gamma-glutamyltransferase 2 OS=Mus musculus OX=10090 GN=Tgm2 PE=1 SV=4 0 2 2 0.769 0 1 1 1 702.85974 1404.71221 1404.71028 1.37 0.00096 0/0 0 0 4561616 HCD 30 MS2 14.83438 470.6 110 65.8861 19539 19539 19537 QEplus033719.raw F4 438.4 380.1 484.8 465.2 487.5 567.4 158 3.03 1 FALSE 1.14E-05 4.38E-07 1.306 -250 92992 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLLEAENSR [R].tLLEAENSR.[L] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.7185 0 1 1 1 631.35162 1261.69597 1261.69495 0.81 0.00051 0/0 0 0 151298944 HCD 30 MS2 15.85927 831.8 14.385 65.8883 19540 19540 19537 QEplus033719.raw F4 963.3 506.6 992.4 765.8 626.3 1136.6 343 3.41 1 FALSE 1.14E-05 3.46E-05 0.945 -250 93008 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSDGIRK [K].lSDGIRk.[F] N-Term(TMT6plex); K7(TMT6plex) 2 Q93092 Transaldolase OS=Mus musculus OX=10090 GN=Taldo1 PE=1 SV=2 Q93092; A0A1B0GR11 Transaldolase OS=Mus musculus OX=10090 GN=Taldo1 PE=1 SV=2; Transaldolase OS=Mus musculus OX=10090 GN=Taldo1 PE=1 SV=1 1 3 3 0.2521 0 1 1 1 416.26776 1246.78873 1246.78834 0.31 0.00013 0/0 0 0 28294814 HCD 30 MS2 51.25958 862.2 30.601 65.8928 19542 19542 19537 QEplus033719.raw F4 853.7 718.1 808 592 1337.3 864.3 411 2.34 1 FALSE 0.005431 0.09247 0.027 -250 93019 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCSSPEFSK [R].ncSSPEFSk.[T] N-Term(TMT6plex); C2(Carbamidomethyl); K9(TMT6plex) 11 Q3U893 C2 domain-containing protein OS=Mus musculus OX=10090 GN=Cpne1 PE=2 SV=1 B7ZCP8; B7ZCP6; V9GX86; B7ZCP5; Q3U893; B7ZCP4; E9Q806; V9GWY2; A3KGK7; B7ZCP7; Q8C166 Copine-1 (Fragment) OS=Mus musculus OX=10090 GN=Cpne1 PE=1 SV=1; Copine-1 (Fragment) OS=Mus musculus OX=10090 GN=Cpne1 PE=1 SV=2; Copine-1 (Fragment) OS=Mus musculus OX=10090 GN=Cpne1 PE=1 SV=1; Copine-1 (Fragment) OS=Mus musculus OX=10090 GN=Cpne1 PE=1 SV=1; C2 domain-containing protein OS=Mus musculus OX=10090 GN=Cpne1 PE=2 SV=1; Copine-1 OS=Mus musculus OX=10090 GN=Cpne1 PE=1 SV=1; Copine-1 OS=Mus musculus OX=10090 GN=Cpne1 PE=1 SV=1; Copine-1 OS=Mus musculus OX=10090 GN=Cpne1 PE=1 SV=1; Copine-1 (Fragment) OS=Mus musculus OX=10090 GN=Cpne1 PE=1 SV=1; Copine-1 (Fragment) OS=Mus musculus OX=10090 GN=Cpne1 PE=1 SV=1; Copine-1 OS=Mus musculus OX=10090 GN=Cpne1 PE=1 SV=1 0 2 2 0.6985 0 1 1 1 757.3905 1513.77373 1513.7721 1.08 0.00081 0/0 0 0 14909056 HCD 30 MS2 18.86356 705 110 65.8999 19545 19545 19537 QEplus033719.raw F4 707 740.9 798 530.6 816 637.8 183 3.88 1 FALSE 1.14E-05 0.000298 0.766 -250 93025 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHEGCEEPATHNALAK [R].iHEGcEEPATHNALAk.[I] N-Term(TMT6plex); C5(Carbamidomethyl); K16(TMT6plex) 4 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 Q80U89; Q68FD5; Q5SXR6; Q3UPJ3 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1 0 3 3 0.8226 0 1 1 1 745.72528 2235.16129 2235.15922 0.92 0.00069 0/0 0 0 8766630 HCD 30 MS2 0 429.7 110 65.9024 19546 19546 19537 QEplus033719.raw F4 426.6 370.8 507.9 365.5 449.3 457.9 334 8.51 1 FALSE 1.14E-05 6.31E-16 4.309 -250 93031 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLVPPSK [R].rLVPPSk.[R] N-Term(TMT6plex); K7(TMT6plex) 2 Q8BH64 EH domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ehd2 PE=1 SV=1 Q8R2X0; Q8BH64 Ehd2 protein OS=Mus musculus OX=10090 GN=Ehd2 PE=2 SV=1; EH domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ehd2 PE=1 SV=1 1 3 3 0.5447 0 1 1 1 418.94791 1254.82917 1254.82981 -0.52 -0.00022 0/0 0 0 9569979 HCD 30 MS2 60.84713 899.2 56.719 65.9046 19547 19547 19537 QEplus033719.raw F4 863.5 883.1 1035.9 618.2 958.5 1035.9 65 2.46 1 FALSE 0.0007056 0.01015 0.402 -250 93040 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CIIPNHEK [R].cIIPNHEk.[RK] N-Term(TMT6plex); C1(Carbamidomethyl); K8(TMT6plex) 14 Q69ZX3; Q5SV64; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; Q80T68; A0A2R8VHF9; Q8BLI3; Q8BWI3; A0A338P6K2; O08638-2; O08638; Q5SV64; Q3UH59; Q8VDD5; E9QPE7; Q8BLI1; Q61879 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 0 3 3 0.6269 0 1 1 1 490.28253 1468.83304 1468.83464 -1.09 -0.00053 0/0 0 0 29711002 HCD 30 MS2 29.46555 865.6 35.956 65.9119 19549 19549 19548 QEplus033719.raw F4 931.7 650.8 961.2 795.2 864.9 989.5 331 3.35 3 FALSE 0.0009447 0.01285 0.361 -250 93052 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGSATVGLK [K].qGSATVGLk.[S] N-Term(TMT6plex); K9(TMT6plex) 2 Q3TS44 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 A0A1B0GS70; Q3TS44 Proteasome subunit alpha type-1 OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 0 2 2 0.5475 0 1 1 1 659.90912 1318.81096 1318.80947 1.13 0.00074 0/0 0 0 51259432 HCD 30 MS2 9.266701 1000.2 45.036 65.9167 19551 19551 19548 QEplus033719.raw F4 1044.7 820.3 1063.6 849 1118.2 1105.6 432 3.58 1 FALSE 1.14E-05 6.17E-06 1.087 -250 93060 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCQFVAVR [K].scQFVAVR.[R] N-Term(TMT6plex); C2(Carbamidomethyl) 2 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 B9EIU1; Q8CGC7 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4 0 2 2 0.5665 0 1 1 1 598.32678 1195.64629 1195.64549 0.66 0.0004 0/0 0 0 42010200 HCD 30 MS2 31.3017 913.9 26.989 65.919 19552 19552 19548 QEplus033719.raw F4 924.4 742.8 1003.8 786.1 991.3 1035.2 207 2.33 1 FALSE 2.26E-05 0.0009975 0.662 -250 93069 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CIIPNHEKK [R].cIIPNHEkk.[A] N-Term(TMT6plex); C1(Carbamidomethyl); K8(TMT6plex); K9(TMT6plex) 1 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 1 4 4 0.5559 0 1 1 1 457.27859 1826.09255 1826.09254 0.01 0 0/0 0 0 26649544 HCD 30 MS2 16.55222 901 55.246 65.9213 19553 19553 19548 QEplus033719.raw F4 870.2 956.6 1096.2 786.5 823.7 872.6 305 3.76 1 FALSE 1.14E-05 0.0006962 0.694 -250 93079 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARPAMEAVIR [R].aRPAMEAVIR.[T] N-Term(TMT6plex) 1 Q8R1F1 Protein Niban 2 OS=Mus musculus OX=10090 GN=Niban2 PE=1 SV=2 Q8R1F1 Protein Niban 2 OS=Mus musculus OX=10090 GN=Niban2 PE=1 SV=2 0 3 3 0.4917 0 1 1 1 448.26578 1342.78278 1342.78266 0.09 0.00004 0/0 0 0 14747836 HCD 30 MS2 77.30021 625.1 38.89 65.9235 19554 19554 19548 QEplus033719.raw F4 527.8 517.6 768.7 518.2 574.8 843.4 358 4.21 1 FALSE 1.14E-05 6.05E-06 1.089 -250 93087 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSLYAQGK [K].dSLYAQGk.[QR] N-Term(TMT6plex); K8(TMT6plex) 3 Q5M9P1 Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1 A0A2I3BPG9; A0A0A6YW33; Q5M9P1 "Ribosomal protein L36A, pseudogene 1 OS=Mus musculus OX=10090 GN=Rpl36a-ps1 PE=3 SV=1; Predicted pseudogene 6525 OS=Mus musculus OX=10090 GN=Gm6525 PE=3 SV=1; Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1" 0 2 2 0.3528 0 1 1 1 670.38568 1339.76409 1339.76219 1.42 0.00095 0/0 0 0 12784057 HCD 30 MS2 32.13901 1089.8 110 65.9261 19555 19555 19548 QEplus033719.raw F4 1119.4 968.5 1246.4 926.8 1196.2 1081.4 339 3.43 1 FALSE 1.14E-05 6.67E-05 0.891 -250 93100 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTAEEMDER [R].lTAEEMDER.[R] N-Term(TMT6plex) 10 Q9JKF1; Q9D408 Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2;Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1 Q9JKF1; A0A0U1RNG5; Q05CQ4; Q3TR56; Q8CGH5; Q9D408; Q8CDW9; Q3TPD2; Q6ZQK2; A0A0U1RPU3 Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2; Ras GTPase-activating-like protein IQGAP1 (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2; Iqgap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Iqgap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Calponin-homology (CH) domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; MKIAA0051 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Ras GTPase-activating-like protein IQGAP1 (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=1 0 2 2 0.7047 0 1 1 1 661.82703 1322.64678 1322.64595 0.63 0.00041 0/0 0 0 9998907 HCD 30 MS2 18.03075 1316.3 110 65.9311 19557 19557 19548 QEplus033719.raw F4 1381.3 1006.7 1305.6 1427.9 1268.6 1507.5 111 3.42 2 FALSE 1.14E-05 8.34E-05 0.872 -250 93114 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SITYGK [K].sITYGk.[G] N-Term(TMT6plex); K6(TMT6plex) 6 Q6PFD9 Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=2 A0A140T8J8; Q4FZE7; B7ZN81; B2RQL0; Q6PFD9; A0A1B0GSX7 Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Nup98 protein (Fragment) OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1; Nup98 protein OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1; Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=2; Nuclear pore complex protein Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1 0 2 2 0.2512 0 1 1 1 563.84808 1126.68889 1126.68723 1.47 0.00083 0/0 0 0 7925818.5 HCD 30 MS2 36.64856 1110.9 110 65.9406 19560 19560 19559 QEplus033719.raw F4 1067.5 952.2 1160.5 839.9 1433.4 1212.1 173 2.07 1 FALSE 0.002784 0.05465 0.129 -250 93124 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELTYQTEEDRK [K].eLTYQTEEDRk.[N] N-Term(TMT6plex); K11(TMT6plex) 13 Q5SX40; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q56A77; Q9ESW6; B2RWW8; Q5SX40; Q5SX39; Q61934; G3UW82; B2RWX0; B2RY26; B2RXX9; Q3TT35; P13542; Q9JHR4 "Myh4 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin heavy chain (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2; Myosin heavy chain IIB (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1" 1 2 2 0.7231 0 1 1 1 935.50494 1870.00261 1869.99583 3.63 0.00339 0/0 0 0 2983094.5 HCD 30 MS2 57.86635 195.2 110 65.9432 19561 19561 19559 QEplus033719.raw F4 249 16.4 76.1 532.6 24 273.4 362 3.9 4 FALSE 1.14E-05 2.33E-08 1.547 -250 93140 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQLAQAVAR [K].eQLAQAVAR.[I] N-Term(TMT6plex) 4 Q8VDJ3 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1 Q8VDJ3; Q8BX68; A0A087WP83; Q3V1M8 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1; Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1 0 2 2 0.5149 0 1 1 1 607.85675 1214.70622 1214.70545 0.64 0.00039 0/0 0 0 58433360 HCD 30 MS2 19.1925 745.1 26.12 65.9477 19563 19563 19559 QEplus033719.raw F4 773.9 574.2 797.6 629.2 809.9 885.5 332 3.36 1 FALSE 1.14E-05 2.01E-05 0.99 -250 93148 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MTSLPAER [K].mTSLPAER.[I] N-Term(TMT6plex) 1 O70310 Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 O70310 Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 0 2 2 0.4086 0 1 1 1 567.31384 1133.62041 1133.61861 1.59 0.0009 0/0 0 0 49469132 HCD 30 MS2 33.02457 1052 23.133 65.9499 19564 19564 19559 QEplus033719.raw F4 1161.7 797.6 1005.1 1099.3 1091.5 1156.9 294 2.57 1 FALSE 4.43E-05 0.001607 0.619 -250 93156 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQDLEFER [K].nQDLEFER.[N] N-Term(TMT6plex) 2 Q8VDC3 Citrate hydro-lyase OS=Mus musculus OX=10090 GN=aco1 PE=3 SV=1 Q8VDC3; P28271 Citrate hydro-lyase OS=Mus musculus OX=10090 GN=aco1 PE=3 SV=1; Cytoplasmic aconitate hydratase OS=Mus musculus OX=10090 GN=Aco1 PE=1 SV=3 0 2 2 0.6159 0 1 1 1 640.32819 1279.6491 1279.648 0.86 0.00055 0/0 0 0 14897800 HCD 30 MS2 21.62437 861.8 110 65.9525 19565 19565 19559 QEplus033719.raw F4 901.5 780.1 956.2 703.6 891.4 938 162 3.28 1 FALSE 1.14E-05 8.85E-05 0.867 -250 93159 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVCDIPPR [K].tAVcDIPPR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 9 Q7TMM9; P99024; P68372; Q9CWF2 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1 Q7TMM9; Q9D6F9; Q62363; Q80ZV2; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2 "Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Beta-tubulin gene M-beta-2, 3' end (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1" 0 3 3 0.4498 0 1 1 1 419.89865 1257.6814 1257.68227 -0.69 -0.00029 0/0 0 0 12177023 HCD 30 MS2 70.06918 576.8 57.576 65.9547 19566 19566 19559 QEplus033719.raw F4 604.5 471 627.2 369.4 713.6 675.2 224 2.89 4 FALSE 5.44E-05 0.002258 0.587 -250 93176 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQDEVEIPAR [K].sQDEVEIPAR.[E] N-Term(TMT6plex) 4 Q60847 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3 Q60847; E9PX70; Q60847-5; Q60847-2 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3; Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1; Isoform 5 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 2 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 0 2 2 0.7117 0 1 1 1 686.86914 1372.731 1372.72697 2.94 0.00202 0/0 0 0 9684937 HCD 30 MS2 0 568 110 65.9597 19568 19568 19559 QEplus033719.raw F4 564.1 497.1 537.5 332.3 982.2 494.7 239 3.26 1 FALSE 1.14E-05 8.22E-08 1.443 -250 93179 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVDVEK [R].eVDVEk.[V] N-Term(TMT6plex); K6(TMT6plex) 2 Q3UPA1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Gna11 PE=1 SV=1 Q3UPA1; P21279 Uncharacterized protein OS=Mus musculus OX=10090 GN=Gna11 PE=1 SV=1; Guanine nucleotide-binding protein G(q) subunit alpha OS=Mus musculus OX=10090 GN=Gnaq PE=1 SV=4 0 2 2 0.2565 0 1 1 1 588.84631 1176.68535 1176.68762 -1.93 -0.00114 0/0 0 0 9309245 HCD 30 MS2 34.05877 1272 110 65.9623 19569 19569 19559 QEplus033719.raw F4 1294.7 1080.7 1245.1 1058.6 1679.7 1273.1 336 2.3 1 FALSE 0.00459 0.08161 0.057 -250 93187 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMGNAIK [R].eMGNAIk.[S] N-Term(TMT6plex); K7(TMT6plex) 1 A2AMM0 Caveolae-associated protein 4 OS=Mus musculus OX=10090 GN=Cavin4 PE=1 SV=1 A2AMM0 Caveolae-associated protein 4 OS=Mus musculus OX=10090 GN=Cavin4 PE=1 SV=1 0 2 2 0.2996 0 1 1 1 610.85864 1220.71001 1220.70731 2.21 0.00135 0/0 0 0 9828183 HCD 30 MS2 29.50122 1258.4 110 65.9696 19571 19571 19570 QEplus033719.raw F4 1388.6 803.9 1291.5 1317.8 1071 1677.4 420 2.67 1 FALSE 0.0004091 0.007391 0.45 -250 93201 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FAEEDKK [K].fAEEDkk.[L] N-Term(TMT6plex); K6(TMT6plex); K7(TMT6plex) 8 P20029 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q3U9G2; Q3U6V3; Q3U7T8; Q3TI47 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1 1 3 3 0.1762 0 1 1 1 518.64392 1553.91721 1553.91422 1.92 0.001 0/0 0 0 46755604 HCD 30 MS2 15.39915 1566.2 25.443 65.9741 19573 19573 19570 QEplus033719.raw F4 1755.5 1201.2 1636.8 1562.6 1774.9 1466.4 323 2.44 1 FALSE 0.0003996 0.007136 0.455 -250 93209 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELAACQLR [K].eLAAcQLR.[I] N-Term(TMT6plex); C5(Carbamidomethyl) 1 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 0 2 2 0.5142 0 1 1 1 595.3324 1189.65752 1189.65606 1.23 0.00073 0/0 0 0 31655004 HCD 30 MS2 46.71542 1210.1 46.422 65.9764 19574 19574 19570 QEplus033719.raw F4 1243.3 1018.4 1291.7 1037.5 1346.5 1322.9 327 2.82 1 FALSE 1.14E-05 0.0001788 0.809 -250 93215 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGSATVGLK [K].qGSATVGLk.[S] N-Term(TMT6plex); K9(TMT6plex) 2 Q3TS44 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 A0A1B0GS70; Q3TS44 Proteasome subunit alpha type-1 OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 0 3 3 0.4731 0 1 1 1 440.27524 1318.81116 1318.80947 1.28 0.00056 0/0 0 0 24927990 HCD 30 MS2 25.26411 759.9 55.416 65.9786 19575 19575 19570 QEplus033719.raw F4 742.8 656.9 821.1 649.7 848.1 841 394 3.53 1 FALSE 1.14E-05 0.0003018 0.765 -250 93224 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQEAQFEK [K].eQEAQFEk.[L] N-Term(TMT6plex); K8(TMT6plex) 8 P30999 Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2 P30999-2; Q3TPD1; P30999; G3X9V2; E9Q8Z8; E9Q8Z6; P30999-3; E9Q8Z5 Isoform 2 of Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Isoform 3 of Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1 0 2 2 0.5125 0 1 1 1 733.89862 1466.78996 1466.78913 0.57 0.00042 0/0 0 0 19081014 HCD 30 MS2 6.551888 958.8 110 65.9811 19576 19576 19570 QEplus033719.raw F4 963.3 939.9 1028.1 615.4 1352.7 853.5 302 3.59 1 FALSE 1.14E-05 0.0002543 0.779 -250 93232 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGELTEDEVER [R].aGELTEDEVER.[V] N-Term(TMT6plex) 5 Q561N5 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1 S4R1N6; Q561N5; Q3TW65; F6YVP7; A0A1Y7VKY1 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=3 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps6 PE=3 SV=2; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps5 PE=3 SV=1 0 2 2 0.6841 0 1 1 1 738.87524 1476.74321 1476.73793 3.57 0.00264 0/0 0 0 13168522 HCD 30 MS2 19.29377 620.4 110 65.9837 19577 19577 19570 QEplus033719.raw F4 589.3 635.1 712.4 534.9 669.1 581.8 170 4.21 1 FALSE 1.14E-05 5.03E-10 1.864 -250 93240 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MAEMQGK [K].mAEMQGk.[S] N-Term(TMT6plex); K7(TMT6plex) 4 Q8BJS4 SUN domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sun2 PE=1 SV=3 Q8BJS4; Q8BJS4-3; Q6A022; Q8BJS4-2 SUN domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sun2 PE=1 SV=3; Isoform 3 of SUN domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sun2; MKIAA0668 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0668 PE=4 SV=1; Isoform 2 of SUN domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sun2 0 2 2 0.3796 0 1 1 1 626.84613 1252.68498 1252.67939 4.47 0.0028 0/0 0 0 8960852 HCD 30 MS2 47.60252 1424.6 110 65.9862 19578 19578 19570 QEplus033719.raw F4 1338.2 1164.3 1477.4 1230.5 1737.1 1599.8 382 2.45 1 FALSE 0.0003211 0.00626 0.473 -250 93249 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AESEEGPDVLR [R].aESEEGPDVLR.[W] N-Term(TMT6plex) 6 Q3TYS4 Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1 Q3TYS4; Q3TAW4; Q8CDS4; Q3TIS3; Q9D662; Q3UKB4 Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1; Protein transport protein Sec23B OS=Mus musculus OX=10090 GN=Sec23b PE=1 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23b PE=2 SV=1 0 2 2 0.6443 0 1 1 1 715.87213 1430.73699 1430.73245 3.17 0.00227 0/0 0 0 7134798.5 HCD 30 MS2 0 403.6 110 65.9887 19579 19579 19570 QEplus033719.raw F4 387.9 377.9 430 303.8 508.4 413.5 179 3.43 1 FALSE 1.14E-05 2.00E-06 1.18 -250 93257 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISQPEDSRQPSNVIR [R].iSQPEDSRQPSNVIR.[Q] N-Term(TMT6plex) 3 A2AA85 SUZ domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Szrd1 PE=1 SV=1 A2AA85; Q6NXN1-2; Q6NXN1 SUZ domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Szrd1 PE=1 SV=1; Isoform 2 of SUZ domain-containing protein 1 OS=Mus musculus OX=10090 GN=Szrd1; SUZ domain-containing protein 1 OS=Mus musculus OX=10090 GN=Szrd1 PE=1 SV=1 1 3 3 0.5714 0 1 1 1 652.35522 1955.05112 1955.05077 0.18 0.00012 0/0 0 0 5193521 HCD 30 MS2 28.45063 452.3 110 65.9912 19580 19580 19570 QEplus033719.raw F4 474.4 400.9 488.3 317.6 569.1 463.4 382 4.06 1 FALSE 1.14E-05 1.92E-08 1.563 -250 93271 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGVFLVR [R].hGVFLVR.[D] N-Term(TMT6plex) 6 Q64010 Adapter molecule crk OS=Mus musculus OX=10090 GN=Crk PE=1 SV=1 Q91VM1; Q5ND50; Q8JZR2; Q64010; Q3TQV3; Q64010-2 V-crk sarcoma virus CT10 oncogene homolog (Avian) OS=Mus musculus OX=10090 GN=Crk PE=2 SV=1; Adapter molecule crk OS=Mus musculus OX=10090 GN=Crk PE=1 SV=2; Adapter molecule crk OS=Mus musculus OX=10090 GN=Crk PE=1 SV=1; Adapter molecule crk OS=Mus musculus OX=10090 GN=Crk PE=1 SV=1; Adapter molecule crk OS=Mus musculus OX=10090 GN=Crk PE=1 SV=1; Isoform Crk-I of Adapter molecule crk OS=Mus musculus OX=10090 GN=Crk 0 3 3 0.6691 0 1 1 1 352.88873 1056.65165 1056.65157 0.08 0.00003 0/0 0 0 11844764 HCD 30 MS2 14.99775 436.5 110 66.001 19583 19583 19581 QEplus033719.raw F4 500.3 379.2 444.7 339.5 531.7 423.7 191 4.14 1 FALSE 5.44E-05 0.002415 0.58 -250 93278 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELTYQTEEDRK [K].eLTYQTEEDRk.[N] N-Term(TMT6plex); K11(TMT6plex) 13 Q5SX40; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q56A77; Q9ESW6; B2RWW8; Q5SX40; Q5SX39; Q61934; G3UW82; B2RWX0; B2RY26; B2RXX9; Q3TT35; P13542; Q9JHR4 "Myh4 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin heavy chain (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2; Myosin heavy chain IIB (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1" 1 3 3 0.6497 0 1 1 1 624.00391 1869.99717 1869.99583 0.72 0.00045 0/0 0 0 183597280 HCD 30 MS2 29.12857 1229.7 10.424 66.0033 19584 19584 19581 QEplus033719.raw F4 1370.1 164.9 440.6 2163.7 2073.2 1165.8 360 3.74 4 FALSE 1.14E-05 2.98E-10 1.907 -250 93283 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTVLGHVQR [R].vTVLGHVQR.[G] N-Term(TMT6plex) 6 P47857; P12382 "ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=3;ATP-dependent 6-phosphofructokinase, liver type OS=Mus musculus OX=10090 GN=Pfkl PE=1 SV=4" Q1LZL7; P47857-3; P47857; P12382; Q99K08; P47857-2 "6-phosphofructokinase (Fragment) OS=Mus musculus OX=10090 GN=Pfkm PE=2 SV=1; Isoform 3 of ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm; ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=3; ATP-dependent 6-phosphofructokinase, liver type OS=Mus musculus OX=10090 GN=Pfkl PE=1 SV=4; ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkm PE=2 SV=1; Isoform 2 of ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm" 0 3 3 0.6236 0 1 1 1 413.25772 1237.75861 1237.75782 0.64 0.00026 0/0 0 0 102313352 HCD 30 MS2 17.92979 256.6 12.587 66.0055 19585 19585 19581 QEplus033719.raw F4 238.9 96.3 222.8 457.5 131 393.2 338 4.57 2 FALSE 1.14E-05 9.67E-07 1.24 -250 93300 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAVQGDVVR [R].vAVQGDVVR.[E] N-Term(TMT6plex) 2 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 B9EIU1; Q8CGC7 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4 0 2 2 0.4392 0 1 1 1 586.35376 1171.70024 1171.69964 0.52 0.0003 0/0 0 0 46356476 HCD 30 MS2 26.17598 734.2 30.637 66.01 19587 19587 19581 QEplus033719.raw F4 728.2 639.4 811.1 617.6 782.7 826.2 270 2.96 1 FALSE 1.14E-05 3.90E-06 1.125 -250 93316 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFSNQYK [K].kFSNQYk.[A] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 3 Q4FJQ0 Rab7 OS=Mus musculus OX=10090 GN=Rab7 PE=1 SV=1 A0A0N4SVG9; Q4FJQ0; A0A0N4SVR6 "RAB7, member RAS oncogene family (Fragment) OS=Mus musculus OX=10090 GN=Rab7 PE=1 SV=3; Rab7 OS=Mus musculus OX=10090 GN=Rab7 PE=1 SV=1; RAB7, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab7 PE=1 SV=1" 1 3 3 0.4813 0 1 1 1 534.65967 1601.96445 1601.96184 1.63 0.00087 0/0 0 0 18254232 HCD 30 MS2 38.87798 1678.9 79.644 66.0168 19590 19590 19581 QEplus033719.raw F4 1639.9 1332.3 1783.3 1355.2 2227 1735.7 420 2.68 1 FALSE 0.0006383 0.009727 0.409 -250 93323 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESSEYLK [K].eSSEYLk.[C] N-Term(TMT6plex); K7(TMT6plex) 5 A0A0R4J140 Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=1 A0A0R4J140; Q5SW19-3; Z4YLI8; Q6P7U7; Q5SW19 Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=1; Isoform 3 of Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh; Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=1; 1300001I01Rik protein (Fragment) OS=Mus musculus OX=10090 GN=Cluh PE=2 SV=1; Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=2 0 2 2 0.465 0 1 1 1 657.3728 1313.73833 1313.7353 2.3 0.00151 0/0 0 0 11088852 HCD 30 MS2 0 812.1 110 66.0193 19591 19591 19581 QEplus033719.raw F4 819.7 568.4 972.2 730.9 799.6 981.5 315 2.43 1 FALSE 0.0008268 0.01141 0.382 -250 93341 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLLADQAEAR [K].kLLADQAEAR.[R] N-Term(TMT6plex); K1(TMT6plex) 2 Q5I0T8 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 Q5I0T8; A2A547 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1; Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 1 3 3 0.7146 0 1 1 1 524.98804 1572.94956 1572.94736 1.4 0.00073 0/0 0 0 77437672 HCD 30 MS2 48.24665 1126.4 15.236 66.0314 19595 19595 19592 QEplus033719.raw F4 1177.7 972 1236.7 1036.2 1181.8 1154 414 3.96 1 FALSE 1.14E-05 1.21E-07 1.412 -250 93347 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IRDEMVATEQER [K].iRDEMVATEQER.[T] N-Term(TMT6plex) 4 O55143-2; O55143 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2 O55143-2; O55143; Q5DTI2; O54994 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; Sarcoplasmic reticulum Ca2+-ATPase (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1 1 3 3 0.7512 0 1 1 1 569.2962 1705.87406 1705.87405 0 0 0/0 0 0 47560844 HCD 30 MS2 5.174565 496.8 29.403 66.0337 19596 19596 19592 QEplus033719.raw F4 517.5 260.8 462.8 695.6 365.3 678.8 234 6.27 2 FALSE 1.14E-05 7.90E-13 2.396 -250 93359 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FNDPHVK [K].fNDPHVk.[T] N-Term(TMT6plex); K7(TMT6plex) 2 Q6P4T2 U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Mus musculus OX=10090 GN=Snrnp200 PE=1 SV=1 Q6P4T2; Q7TMG2 U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Mus musculus OX=10090 GN=Snrnp200 PE=1 SV=1; Snrnp200 protein (Fragment) OS=Mus musculus OX=10090 GN=Snrnp200 PE=2 SV=1 0 3 3 0.7098 0 1 1 1 438.92429 1314.7583 1314.75704 0.96 0.00042 0/0 0 0 25173738 HCD 30 MS2 20.85304 876.7 52.015 66.0382 19598 19598 19592 QEplus033719.raw F4 839.2 812.2 945.3 623.8 984.4 1055.3 346 2.55 1 FALSE 0.001169 0.01572 0.324 -250 93364 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AITVHPEK [R].aITVHPEk.[G] N-Term(TMT6plex); K8(TMT6plex) 3 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 Q3U454; A0A0R4J0I9; Q91ZX7 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lrp1 PE=2 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 0 3 3 0.4817 0 1 1 1 451.61533 1352.83142 1352.83021 0.9 0.00041 0/0 0 0 23715022 HCD 30 MS2 23.3116 718.1 39.402 66.0405 19599 19599 19592 QEplus033719.raw F4 809.4 591.6 776.6 659.2 702 770.1 229 3.28 1 FALSE 0.0002419 0.005037 0.5 -250 93374 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVPAPAPK [K].kVPAPAPk.[K] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; F6RSJ3; A0A5K1VVQ9; Q812E1; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=8; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Connectin/titin N2A-PEVK (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 1 3 3 0.6957 0 1 1 1 499.00494 1495.00028 1494.9975 1.86 0.00093 0/0 0 0 19727598 HCD 30 MS2 49.12776 1457.2 69.11 66.0427 19600 19600 19592 QEplus033719.raw F4 2344.3 592.6 1054 1975.1 1149.6 1627.5 16 3.22 2 FALSE 1.14E-05 0.0004555 0.73 -250 93382 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGVIEDHSNR [K].lGVIEDHSNR.[T] N-Term(TMT6plex) 6 Q3UBU0 HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1 Q3TUD6; Q3UBU0; Q91V38; Q8CCY5; F7C312; P08113 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Heat shock protein 90, beta (Grp94), member 1 OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Endoplasmin (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=1; Endoplasmin OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=2" 0 3 3 0.7088 0 1 1 1 456.91971 1368.74457 1368.74329 0.93 0.00043 0/0 0 0 16614116 HCD 30 MS2 43.11338 737.8 67.65 66.0475 19602 19602 19592 QEplus033719.raw F4 826.2 650.9 799.6 613.3 775.5 761 290 4.43 1 FALSE 1.14E-05 4.48E-07 1.304 -250 93392 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQTLLHSEK [K].kQTLLHSEk.[R] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 2 Q9DBR7 Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2 Q9DBR7; Q9DBR7-2 Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2; Isoform 2 of Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a 1 4 4 0.2654 0 1 1 1 443.53171 1771.105 1771.10448 0.29 0.00013 0/0 0 0 10545227 HCD 30 MS2 22.58022 668.2 96.288 66.0548 19604 19604 19603 QEplus033719.raw F4 651.6 520.2 689 576.3 847.7 724.5 202 4.22 1 FALSE 1.14E-05 0.0001878 0.805 -250 93398 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLLADQAEAR [K].kLLADQAEAR.[R] N-Term(TMT6plex); K1(TMT6plex) 2 Q5I0T8 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 Q5I0T8; A2A547 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1; Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 1 2 2 0.681 0 1 1 1 786.97784 1572.94841 1572.94736 0.67 0.00053 0/0 0 0 9297295 HCD 30 MS2 29.00921 497.5 110 66.0573 19605 19605 19603 QEplus033719.raw F4 518.9 470.1 568.1 418.4 506.7 503 431 3.26 1 FALSE 1.14E-05 8.99E-08 1.436 -250 93402 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YELGRPAANTK [K].yELGRPAANTk.[I] N-Term(TMT6plex); K11(TMT6plex) 6 P62242 40S ribosomal protein S8 OS=Mus musculus OX=10090 GN=Rps8 PE=1 SV=2 Q3UJU6; Q3UA25; Q9CQW4; P62242; Q5M9L9; Q9CRJ5 40S ribosomal protein S8 (Fragment) OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1; 40S ribosomal protein S8 (Fragment) OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1; 40S ribosomal protein S8 (Fragment) OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1; 40S ribosomal protein S8 OS=Mus musculus OX=10090 GN=Rps8 PE=1 SV=2; 40S ribosomal protein S8 OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1; 40S ribosomal protein S8 (Fragment) OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1 0 3 3 0.5 0 1 1 1 559.995 1677.97043 1677.96883 0.96 0.00054 0/0 0 0 195933792 HCD 30 MS2 38.47993 994.8 8.059 66.0596 19606 19606 19603 QEplus033719.raw F4 1063.4 797 1128.7 825.1 1086.3 1068.2 428 2.32 1 FALSE 0.0001603 0.003821 0.532 -250 93412 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSLYAQGK [K].dSLYAQGk.[QR] N-Term(TMT6plex); K8(TMT6plex) 3 Q5M9P1 Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1 A0A2I3BPG9; A0A0A6YW33; Q5M9P1 "Ribosomal protein L36A, pseudogene 1 OS=Mus musculus OX=10090 GN=Rpl36a-ps1 PE=3 SV=1; Predicted pseudogene 6525 OS=Mus musculus OX=10090 GN=Gm6525 PE=3 SV=1; Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1" 0 3 3 0.5287 0 1 1 1 447.25955 1339.7641 1339.76219 1.43 0.00064 0/0 0 0 34907196 HCD 30 MS2 29.14907 736.6 28.883 66.0618 19607 19607 19603 QEplus033719.raw F4 728.1 614.5 792.1 625.9 784.6 874.3 339 2.61 1 FALSE 0.001185 0.01624 0.318 -250 93422 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQMPDPK [R].tQMPDPk.[T] N-Term(TMT6plex); K7(TMT6plex) 1 Q9D115 Zinc finger protein 706 OS=Mus musculus OX=10090 GN=Znf706 PE=1 SV=1 Q9D115 Zinc finger protein 706 OS=Mus musculus OX=10090 GN=Znf706 PE=1 SV=1 0 2 2 0.4658 0 1 1 1 637.86273 1274.71819 1274.71788 0.24 0.00015 0/0 0 0 16466763 HCD 30 MS2 49.94199 1320.8 110 66.0643 19608 19608 19603 QEplus033719.raw F4 1275.7 1212.2 1353 868.8 1912.5 1302.9 323 2.19 1 FALSE 0.003422 0.06626 0.097 -250 93428 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FCANTCVDCR [K].fcANTcVDcR.[K] N-Term(TMT6plex); C2(Carbamidomethyl); C6(Carbamidomethyl); C9(Carbamidomethyl) 9 A2AEX6 Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1 A2AEX6; P97447-2; A2AEY1; P97447; A2AEX7; A2AEY0; A2AEX8; A2AEY2; A2AEX9 Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1; Isoform 2 of Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1; Four and a half LIM domains protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=8; Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=3; Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1; Four and a half LIM domains protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1; Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1; Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1; Four and a half LIM domains protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1 0 2 2 0.6583 0 1 1 1 766.33667 1531.66606 1531.66532 0.49 0.00037 0/0 0 0 13295019 HCD 30 MS2 0 522.8 110 66.0669 19609 19609 19603 QEplus033719.raw F4 618.2 365.7 488.3 491.2 608.7 564.8 14 3.57 1 FALSE 1.14E-05 1.04E-05 1.044 -250 93440 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IRDEMVATEQER [K].iRDEMVATEQER.[T] N-Term(TMT6plex) 4 O55143-2; O55143 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2 O55143-2; O55143; Q5DTI2; O54994 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; Sarcoplasmic reticulum Ca2+-ATPase (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1 1 2 2 0.637 0 1 1 1 853.44305 1705.87883 1705.87405 2.8 0.00239 0/0 0 0 5326291 HCD 30 MS2 0 123.3 110 66.0719 19611 19611 19603 QEplus033719.raw F4 121.2 72.8 124.2 171.8 82.1 167.5 244 4.49 2 FALSE 1.14E-05 5.82E-07 1.282 -250 93456 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQGSVSASITEGQQNEQ [K].gQGSVSASITEGQQNEQ.[-] N-Term(TMT6plex) 1 Q9D1M0 Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3 Q9D1M0 Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3 0 3 3 0.802 0 1 1 1 650.31964 1948.94437 1948.94094 1.76 0.00114 0/0 0 0 4983612 HCD 30 MS2 0 254.2 110 66.0769 19613 19613 19603 QEplus033719.raw F4 268.5 214 267.7 201.8 287.1 286 130 4.9 1 FALSE 1.14E-05 2.57E-08 1.539 -250 93464 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RASVFVK [K].rASVFVk.[L] N-Term(TMT6plex); K7(TMT6plex) 6 Q3U9V1 TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1 E9Q1V0; F8WJK8; Q3U9V1; Q3U3N7; Q3TGW8; Q99L47 Hsc70-interacting protein (Fragment) OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1; Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1 1 3 3 0.2991 0 1 1 1 422.27649 1264.81491 1264.81416 0.59 0.00025 0/0 0 0 88185296 HCD 30 MS2 10.22375 701.5 11.982 66.0842 19615 19615 19614 QEplus033719.raw F4 738.3 587.2 830.3 574.9 700.8 777.3 148 3.21 1 FALSE 0.0002909 0.005827 0.482 -250 93474 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAAGIPGGKGEK [R].gAAGIPGGkGEk.[G] N-Term(TMT6plex); K9(TMT6plex); K12(TMT6plex) 4 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64; Q3TP88 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 1 3 3 0.4154 0 1 1 1 577.02435 1729.05851 1729.05753 0.56 0.00033 0/0 0 0 27320598 HCD 30 MS2 37.84099 1518.3 110 66.0867 19616 19616 19614 QEplus033719.raw F4 1378.5 1773.5 1776.8 829.7 2051.8 1299.6 300 2.6 1 FALSE 1.14E-05 0.0007615 0.686 -250 93482 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTVVPTKK [R].nTVVPTkk.[S] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 10 P20029 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q3U9G2; Q3U6V3; Q3TUS2; Q3UEM8; Q3U7T8; Q3TI47 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1 1 3 3 0.3133 0 1 1 1 525.34662 1574.0253 1574.02444 0.55 0.00029 0/0 0 0 110429360 HCD 30 MS2 54.8783 1238.4 10.935 66.089 19617 19617 19614 QEplus033719.raw F4 1329.7 1047.6 1310.9 1153.1 1304.4 1284.5 282 2.33 1 FALSE 0.007925 0.1313 -0.062 -250 93492 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYREELK [R].vYREELk.[R] N-Term(TMT6plex); K7(TMT6plex) 6 B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 Q4FK88; Q3US43; Q4FJV4; Q3U5N9; A0A494BBD8; B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 1 3 3 0.3581 0 1 1 1 465.6189 1394.84214 1394.84077 0.98 0.00045 0/0 0 0 78242456 HCD 30 MS2 20.59569 1035.1 18.075 66.0912 19618 19618 19614 QEplus033719.raw F4 982.5 1095 1207.9 598.7 1334.1 992.4 329 2.15 1 FALSE 0.005871 0.09778 0.013 -250 93507 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LREDGIQK [R].lREDGIQk.[R] N-Term(TMT6plex); K8(TMT6plex) 2 O08915 AH receptor-interacting protein OS=Mus musculus OX=10090 GN=Aip PE=1 SV=1 D3YW40; O08915 AH receptor-interacting protein (Fragment) OS=Mus musculus OX=10090 GN=Aip PE=1 SV=1; AH receptor-interacting protein OS=Mus musculus OX=10090 GN=Aip PE=1 SV=1 1 3 3 0.2105 0 1 1 1 472.95816 1416.85993 1416.85748 1.72 0.00081 0/0 0 0 24632014 HCD 30 MS2 47.94352 1137.3 53.246 66.0957 19620 19620 19614 QEplus033719.raw F4 1281.1 957.3 1235.3 921.7 1210.5 1217.8 584 3.04 1 FALSE 0.001506 0.02261 0.26 -250 93513 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RIHMVYSK [K].rIHMVYSk.[R] N-Term(TMT6plex); K8(TMT6plex) 6 A2RS68 U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 A0A1B0GRR8; A2RS68; Q9CR32; Q7TT81; A0A1B0GR44; Q6ZWP0 U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=3; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 1 4 4 0.4564 0 1 1 1 373.72684 1491.88552 1491.88701 -1 -0.00037 0/0 0 0 14418036 HCD 30 MS2 73.61993 353.4 48.694 66.098 19621 19621 19614 QEplus033719.raw F4 343.4 309.1 452 258 355.2 402.8 386 2.87 1 FALSE 0.001778 0.03038 0.215 -250 93528 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SISVQQEK [K].sISVQQEk.[E] N-Term(TMT6plex); K8(TMT6plex) 4 Q3TJD4 ATP synthase subunit b OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1 Q3TJD4; Q9CQQ7; Q64218; Q3UF04 "ATP synthase subunit b OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1; ATP synthase F(0) complex subunit B1, mitochondrial OS=Mus musculus OX=10090 GN=Atp5pb PE=1 SV=1; ATP synthase subunit b (Fragment) OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1; ATP synthase subunit b OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1" 0 2 2 0.4318 0 1 1 1 688.91217 1376.81706 1376.81495 1.54 0.00106 0/0 0 0 11890618 HCD 30 MS2 8.148881 1041 110 66.103 19623 19623 19614 QEplus033719.raw F4 1134.1 764.8 1122.4 1115.6 890.3 1219 429 3.52 1 FALSE 1.14E-05 0.0002003 0.799 -250 93556 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVVFIAQR [K].hVVFIAQR.[R] N-Term(TMT6plex) 1 Q4FZE6 40S ribosomal protein S7 OS=Mus musculus OX=10090 GN=Rps7 PE=2 SV=1 Q4FZE6 40S ribosomal protein S7 OS=Mus musculus OX=10090 GN=Rps7 PE=2 SV=1 0 2 2 0.5636 0 1 1 1 599.86707 1198.72685 1198.72579 0.89 0.00053 0/0 0 0 40519868 HCD 30 MS2 33.11649 614 27.307 66.1173 19628 19628 19625 QEplus033719.raw F4 638.2 482.3 694 506 607.9 755.5 246 2.91 1 FALSE 1.14E-05 0.0001753 0.81 -250 93563 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQGNIYKPNNK [R].eQGNIYkPNNk.[A] N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex) 2 P49817 Caveolin-1 OS=Mus musculus OX=10090 GN=Cav1 PE=1 SV=1 H3BKG0; P49817 Caveolin-1 OS=Mus musculus OX=10090 GN=Cav1 PE=1 SV=1; Caveolin-1 OS=Mus musculus OX=10090 GN=Cav1 PE=1 SV=1 0 3 3 0.4562 0 1 1 1 664.72144 1992.14975 1992.14814 0.81 0.00054 0/0 0 0 29265590 HCD 30 MS2 24.0763 1624.5 110 66.1198 19629 19629 19625 QEplus033719.raw F4 1514.4 1731.7 1775.6 1204 2072 1449.1 463 3.2 1 FALSE 1.14E-05 1.40E-07 1.399 -250 93567 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCHLLVATPGR [R].gcHLLVATPGR.[L] N-Term(TMT6plex); C2(Carbamidomethyl) 6 B9EKE9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1 B9EKE9; B7ZWF1; Q62095; Q3TQX5; P16381; Q3U484 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; ATP-dependent RNA helicase DDX3Y OS=Mus musculus OX=10090 GN=Ddx3y PE=1 SV=2; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=1; Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus OX=10090 GN=D1Pas1 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3y PE=2 SV=1 0 3 3 0.6427 0 1 1 1 470.60156 1409.79013 1409.78847 1.18 0.00055 0/0 0 0 26130030 HCD 30 MS2 14.48963 390 66.361 66.1221 19630 19630 19625 QEplus033719.raw F4 421.9 320.2 422.2 300.8 477.4 397.4 368 3.89 1 FALSE 1.14E-05 1.32E-07 1.405 -250 93572 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGVIEDHSNR [K].lGVIEDHSNR.[T] N-Term(TMT6plex) 6 Q3UBU0 HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1 Q3TUD6; Q3UBU0; Q91V38; Q8CCY5; F7C312; P08113 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Heat shock protein 90, beta (Grp94), member 1 OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Endoplasmin (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=1; Endoplasmin OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=2" 0 2 2 0.6614 0 1 1 1 684.87573 1368.74419 1368.74329 0.65 0.00045 0/0 0 0 12332051 HCD 30 MS2 40.46623 834.2 110 66.1246 19631 19631 19625 QEplus033719.raw F4 869.2 753.5 922.7 614 992 854 293 3.19 1 FALSE 1.14E-05 3.98E-07 1.313 -250 93582 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPTALSEK [R].sPTALSEk.[M] N-Term(TMT6plex); K8(TMT6plex) 1 Q99PP2 Zinc finger protein 318 OS=Mus musculus OX=10090 GN=Znf318 PE=1 SV=3 Q99PP2 Zinc finger protein 318 OS=Mus musculus OX=10090 GN=Znf318 PE=1 SV=3 0 2 2 0.3715 0 1 1 1 645.88806 1290.76885 1290.76694 1.48 0.00095 0/0 0 0 9014859 HCD 30 MS2 17.7135 990 110 66.1271 19632 19632 19625 QEplus033719.raw F4 1111.9 545.8 1175 858.9 1003.5 1244.8 517 2.53 1 FALSE 0.004288 0.07864 0.065 -250 93591 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQCEDDLAEK [K].aQcEDDLAEk.[Q] N-Term(TMT6plex); C3(Carbamidomethyl); K10(TMT6plex) 5 Q8BQK0 TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Asph PE=2 SV=1 Q8BQK0; Q8CBM2; A2AL85; Q9EQ66; Q8BSY0 TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Asph PE=2 SV=1; Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1; Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1; Aspartly beta-hydroxylase OS=Mus musculus OX=10090 GN=ASPH PE=3 SV=1; Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus OX=10090 GN=Asph PE=1 SV=1 0 2 2 0.574 0 1 1 1 818.91595 1636.82463 1636.82526 -0.38 -0.00031 0/0 0 0 8906657 HCD 30 MS2 8.291384 481.7 110 66.1297 19633 19633 19625 QEplus033719.raw F4 448 464.6 567.6 384.4 534.9 490.9 188 4.39 1 FALSE 1.14E-05 4.31E-07 1.307 -250 93606 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YELGRPAANTK [K].yELGRPAANTk.[I] N-Term(TMT6plex); K11(TMT6plex) 6 P62242 40S ribosomal protein S8 OS=Mus musculus OX=10090 GN=Rps8 PE=1 SV=2 Q3UJU6; Q3UA25; Q9CQW4; P62242; Q5M9L9; Q9CRJ5 40S ribosomal protein S8 (Fragment) OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1; 40S ribosomal protein S8 (Fragment) OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1; 40S ribosomal protein S8 (Fragment) OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1; 40S ribosomal protein S8 OS=Mus musculus OX=10090 GN=Rps8 PE=1 SV=2; 40S ribosomal protein S8 OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1; 40S ribosomal protein S8 (Fragment) OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1 0 2 2 0.6907 0 1 1 1 839.48785 1677.96843 1677.96883 -0.23 -0.0002 0/0 0 0 7218927 HCD 30 MS2 0 292.1 110 66.142 19637 19637 19636 QEplus033719.raw F4 299.3 229.4 337.1 262.2 309.5 315.3 437 2.91 1 FALSE 1.14E-05 3.58E-06 1.132 -250 93615 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQEAQFEK [K].eQEAQFEk.[L] N-Term(TMT6plex); K8(TMT6plex) 8 P30999 Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2 P30999-2; Q3TPD1; P30999; G3X9V2; E9Q8Z8; E9Q8Z6; P30999-3; E9Q8Z5 Isoform 2 of Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Isoform 3 of Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1 0 3 3 0.3727 0 1 1 1 489.60355 1466.79609 1466.78913 4.74 0.00232 0/0 0 0 1163880 HCD 30 MS2 95.08716 1334.2 110 66.1445 19638 19638 19636 QEplus033719.raw F4 2089.3 1002 1309.9 971.5 1393.5 1239.2 323 1.61 1 FALSE 0.004624 0.08184 0.057 -250 93631 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHVIEALR [K].eHVIEALR.[R] N-Term(TMT6plex) 4 A2AM97 Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1 P86048; I7HLV2; Q3THJ6; A2AM97 60S ribosomal protein L10-like OS=Mus musculus OX=10090 GN=Rpl10l PE=2 SV=1; 60S ribosomal protein L10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=1 SV=1; Ribosomal_L16 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1 0 2 2 0.4331 0 1 1 1 598.35474 1195.7022 1195.69964 2.14 0.00128 0/0 0 0 31371070 HCD 30 MS2 49.88204 761.6 28.375 66.149 19640 19640 19636 QEplus033719.raw F4 750.9 601.2 817.5 716.8 744.4 939 271 2.54 1 FALSE 0.001074 0.0139 0.347 -250 93644 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RWGTDEVK [K].rWGTDEVk.[F] N-Term(TMT6plex); K8(TMT6plex) 7 Q7TMN7 Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1 Q7TMN7; D3Z0S1; F7ANV6; A0A0N4SV57; P97429; A0A0N4SW89; Q8BSL2 Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin A4 OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=4; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1 1 3 3 0.4375 0 1 1 1 483.61392 1448.82721 1448.82618 0.71 0.00034 0/0 0 0 23330938 HCD 30 MS2 27.72611 1095.6 52.469 66.1536 19642 19642 19636 QEplus033719.raw F4 1176.9 1005.2 1219.2 773.4 1269.5 1129.3 498 3.2 1 FALSE 1.14E-05 0.0006704 0.697 -250 93652 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SISVQQEK [K].sISVQQEk.[E] N-Term(TMT6plex); K8(TMT6plex) 4 Q3TJD4 ATP synthase subunit b OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1 Q3TJD4; Q9CQQ7; Q64218; Q3UF04 "ATP synthase subunit b OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1; ATP synthase F(0) complex subunit B1, mitochondrial OS=Mus musculus OX=10090 GN=Atp5pb PE=1 SV=1; ATP synthase subunit b (Fragment) OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1; ATP synthase subunit b OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1" 0 3 3 0.2357 0 1 1 1 459.61023 1376.81614 1376.81495 0.86 0.00039 0/0 0 0 18671330 HCD 30 MS2 22.35794 677.8 40.052 66.1558 19643 19643 19636 QEplus033719.raw F4 705.6 515 718.3 655.6 679.9 792.3 412 2.8 1 FALSE 0.001506 0.02258 0.261 -250 93679 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYREELK [R].vYREELk.[R] N-Term(TMT6plex); K7(TMT6plex) 6 B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 Q4FK88; Q3US43; Q4FJV4; Q3U5N9; A0A494BBD8; B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 1 2 2 0.4784 0 1 1 1 697.92505 1394.84282 1394.84077 1.47 0.00102 0/0 0 0 9456576 HCD 30 MS2 9.500937 681.1 110 66.1634 19646 19646 19636 QEplus033719.raw F4 634.6 763.7 812.7 447.7 830.9 596.9 338 2.32 1 FALSE 0.001359 0.01945 0.286 -250 93686 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSVSNLEK [R].qSVSNLEk.[K] N-Term(TMT6plex); K8(TMT6plex) 4 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 0 2 2 0.4286 0 1 1 1 681.90405 1362.80083 1362.7993 1.12 0.00076 0/0 0 0 18779066 HCD 30 MS2 14.06498 923.7 110 66.1707 19648 19648 19647 QEplus033719.raw F4 917.4 822.2 1081.5 740.6 1023.8 956.6 464 3.43 1 FALSE 1.14E-05 7.91E-05 0.877 -250 93696 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CSQAVYAAEK [R].cSQAVYAAEk.[V] N-Term(TMT6plex); C1(Carbamidomethyl); K10(TMT6plex) 1 P97315 Cysteine and glycine-rich protein 1 OS=Mus musculus OX=10090 GN=Csrp1 PE=1 SV=3 P97315 Cysteine and glycine-rich protein 1 OS=Mus musculus OX=10090 GN=Csrp1 PE=1 SV=3 0 2 2 0.7403 0 1 1 1 792.9278 1584.84831 1584.8456 1.71 0.00136 0/0 0 0 7948408.5 HCD 30 MS2 0 590.5 110 66.1732 19649 19649 19647 QEplus033719.raw F4 585.9 605.6 677.4 378.4 801.1 494.8 296 4.62 1 FALSE 1.14E-05 1.22E-08 1.601 -250 93702 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVSSLK [R].eVSSLk.[N] N-Term(TMT6plex); K6(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q7TQJ6; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 0 2 2 0.2452 0 1 1 1 560.85303 1120.69878 1120.6978 0.88 0.00049 0/0 0 0 390447808 HCD 30 MS2 34.59391 797.7 3.615 66.1755 19650 19650 19647 QEplus033719.raw F4 784.1 649.1 828.3 663.6 1094.4 766.8 137 2.08 1 FALSE 0.008228 0.1406 -0.075 -250 93707 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTTIPTKK [R].nTTIPTkk.[S] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 1 3 3 0.4506 0 1 1 1 530.67865 1590.0214 1590.01935 1.28 0.00068 0/0 0 0 147687616 HCD 30 MS2 23.12363 1460 14.082 66.1777 19651 19651 19647 QEplus033719.raw F4 1596.2 1109.2 1519.5 1490.4 1434.1 1610.6 242 2.33 1 FALSE 0.001456 0.02095 0.273 -250 93716 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADHLLK [R].aDHLLk.[A] N-Term(TMT6plex); K6(TMT6plex) 1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 0 3 3 0.0576 0 1 1 1 385.58176 1154.73072 1154.72976 0.82 0.00032 0/0 0 0 32576028 HCD 30 MS2 38.86222 570.4 27.335 66.18 19652 19652 19647 QEplus033719.raw F4 654 423.3 554.5 534.7 675.5 580.6 105 2.43 1 FALSE 0.00673 0.1066 -0.011 -250 93723 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYDITR [R].vYDITR.[F] N-Term(TMT6plex) 4 Q3TH64 Cytochrome b5 heme-binding domain-containing protein OS=Mus musculus OX=10090 GN=Cyb5b PE=2 SV=1 Q3TH64; Q3TN44; Q9CQX2; Q3TLE8 Cytochrome b5 heme-binding domain-containing protein OS=Mus musculus OX=10090 GN=Cyb5b PE=2 SV=1; Cytochrome b5 heme-binding domain-containing protein OS=Mus musculus OX=10090 GN=Cyb5b PE=2 SV=1; Cytochrome b5 type B OS=Mus musculus OX=10090 GN=Cyb5b PE=1 SV=1; Cytochrome b5 heme-binding domain-containing protein OS=Mus musculus OX=10090 GN=Cyb5b PE=2 SV=1 0 2 2 0.4293 0 1 1 1 498.29059 995.5739 995.57231 1.6 0.00079 0/0 0 0 23486580 HCD 30 MS2 43.32217 1161.6 40.384 66.1822 19653 19653 19647 QEplus033719.raw F4 1112.7 1019.1 1252.9 1165.8 1104.1 1314.8 71 1.91 1 FALSE 0.009274 0.171 -0.109 -250 93732 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLEGLSQR [K].dLEGLSQR.[L] N-Term(TMT6plex) 3 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 2 2 0.1784 0 1 1 1 573.81927 1146.63127 1146.63162 -0.3 -0.00017 0/0 0 0 22375028 HCD 30 MS2 45.81749 1269.3 47.882 66.1845 19654 19654 19647 QEplus033719.raw F4 1315.1 1162.3 1395.4 919.1 1630.7 1193.3 276 2.69 1 FALSE 4.43E-05 0.00148 0.627 -250 93751 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITDQYRPK [R].iTDQYRPk.[W] N-Term(TMT6plex); K8(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.4759 0 1 1 1 493.63174 1478.88068 1478.87313 5.1 0.00252 0/0 0 0 14681699 HCD 30 MS2 32.1598 1403.7 87.672 66.1913 19657 19657 19647 QEplus033719.raw F4 1494.2 581.8 1198.7 2384.1 689.7 2073.6 361 2.9 2 FALSE 0.0009447 0.01288 0.361 -250 93764 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVFAHEHEEMK [K].eVFAHEHEEMk.[N] N-Term(TMT6plex); K11(TMT6plex) 5 Q921S3 Malic enzyme OS=Mus musculus OX=10090 GN=Me1 PE=2 SV=1 Q61829; Q3TQP6; Q921S3; P06801; Q99LF5 MOD-1 null malic enzyme (Fragment) OS=Mus musculus OX=10090 GN=Me1 PE=2 SV=1; Malic enzyme OS=Mus musculus OX=10090 GN=Me1 PE=1 SV=1; Malic enzyme OS=Mus musculus OX=10090 GN=Me1 PE=2 SV=1; NADP-dependent malic enzyme OS=Mus musculus OX=10090 GN=Me1 PE=1 SV=2; Me1 protein OS=Mus musculus OX=10090 GN=Me1 PE=2 SV=1 0 4 4 0.7004 0 1 1 1 461.73999 1843.93813 1843.94129 -1.71 -0.00079 0/0 0 0 15183870 HCD 30 MS2 55.90699 567.4 33.33 66.2009 19660 19660 19658 QEplus033719.raw F4 600.3 399 593.6 549.5 484.1 777.7 241 5.04 1 FALSE 1.14E-05 3.14E-05 0.953 -250 93770 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAGIEER [R].lAGIEER.[C] N-Term(TMT6plex) 4 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q62261; A0A0A0MQG2; Q5DTR4; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; MKIAA4049 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 2 2 0.1869 0 1 1 1 508.80096 1016.59465 1016.59378 0.86 0.00044 0/0 0 0 34255800 HCD 30 MS2 53.76533 1205.4 34.281 66.2031 19661 19661 19658 QEplus033719.raw F4 1085.5 1128.2 1509 1071.4 1070.1 1368.1 250 2.14 2 FALSE 0.003575 0.06846 0.092 -250 93780 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATFSSVPR [R].aTFSSVPR.[A] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.4939 0 1 1 1 547.31396 1093.62065 1093.62032 0.3 0.00016 0/0 0 0 28299554 HCD 30 MS2 36.64821 1116.4 59.833 66.2054 19662 19662 19658 QEplus033719.raw F4 1052.2 993.4 1382.7 1018.8 991.8 1259.4 219 2.45 2 FALSE 5.44E-05 0.00194 0.601 -250 93795 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITPEEAK [R].iTPEEAk.[Y] N-Term(TMT6plex); K7(TMT6plex) 5 P62702 "40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2" V9GWY0; Q545F8; P62702; Q3V1Z5; Q3UXQ6 "40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Gm15013 PE=3 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1; 40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4l PE=2 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1" 0 3 3 0.376 0 1 1 1 415.92065 1245.74741 1245.74547 1.55 0.00065 0/0 0 0 21478138 HCD 30 MS2 64.65437 593.8 37.803 66.2099 19664 19664 19658 QEplus033719.raw F4 591.3 460.5 639.5 497.1 697.6 677 467 2.58 1 FALSE 0.004865 0.08502 0.048 -250 93809 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVSPALR [K].vVSPALR.[A] N-Term(TMT6plex) 1 Q60960 Importin subunit alpha-5 OS=Mus musculus OX=10090 GN=Kpna1 PE=1 SV=2 Q60960 Importin subunit alpha-5 OS=Mus musculus OX=10090 GN=Kpna1 PE=1 SV=2 0 2 2 0.4018 0 1 1 1 485.8161 970.62493 970.62468 0.25 0.00012 0/0 0 0 16395808 HCD 30 MS2 30.91667 1066.7 78.164 66.2144 19666 19666 19658 QEplus033719.raw F4 1239.7 685.3 1041.3 990.5 1117.1 1326.1 85 2.24 1 FALSE 0.001641 0.02675 0.234 -250 93814 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTVLASK [K].qTVLASk.[F] N-Term(TMT6plex); K7(TMT6plex) 2 Q8R1B4 Eukaryotic translation initiation factor 3 subunit C OS=Mus musculus OX=10090 GN=Eif3c PE=1 SV=1 Q8BVX3; Q8R1B4 eIF-3c_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3c PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit C OS=Mus musculus OX=10090 GN=Eif3c PE=1 SV=1 0 2 2 0.3843 0 1 1 1 602.88831 1204.76933 1204.76654 2.32 0.0014 0/0 0 0 15106614 HCD 30 MS2 68.17802 1589.9 110 66.2169 19667 19667 19658 QEplus033719.raw F4 1695.2 1249.6 1630.8 1173 2125.8 1665 198 2.81 1 FALSE 0.0002419 0.004934 0.503 -250 93824 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAEHFQEAVK [K].tAEHFQEAVk.[E] N-Term(TMT6plex); K10(TMT6plex) 2 Q61112 45 kDa calcium-binding protein OS=Mus musculus OX=10090 GN=Sdf4 PE=1 SV=1 Q61112; Q61112-2 45 kDa calcium-binding protein OS=Mus musculus OX=10090 GN=Sdf4 PE=1 SV=1; Isoform 2 of 45 kDa calcium-binding protein OS=Mus musculus OX=10090 GN=Sdf4 0 3 3 0.6726 0 1 1 1 539.9715 1617.89994 1617.90008 -0.09 -0.00005 0/0 0 0 12858520 HCD 30 MS2 26.7651 1199.9 110 66.2194 19668 19668 19658 QEplus033719.raw F4 1560.9 853 1184.9 1109.9 1215.3 1275.3 425 4.49 1 FALSE 1.14E-05 7.89E-08 1.447 -250 93837 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NFGEDMDDER [K].nFGEDMDDER.[L] N-Term(TMT6plex) 4 P29341 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2 P29341; Q3U8U8; Q8BN32; Q99KL3 Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1; Polyadenylate-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Pabpc1 PE=2 SV=1 0 2 2 0.8274 0 1 1 1 728.81525 1456.62322 1456.62119 1.39 0.00101 0/0 0 0 13445619 HCD 30 MS2 10.568 499.3 110 66.2292 19671 19671 19669 QEplus033719.raw F4 484.2 438.7 557.7 409.1 563.6 542.6 6 3.36 1 FALSE 1.14E-05 8.66E-07 1.249 -250 93840 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLMSADNVR [R].sLMSADNVR.[Q] N-Term(TMT6plex) 3 Q3UKJ6 RNA helicase OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1 Q497W9; Q3UKJ6; Q3TFE5 DEAH (Asp-Glu-Ala-His) box polypeptide 15 OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Dhx15 PE=2 SV=1 0 2 2 0.642 0 1 1 1 611.3269 1221.64653 1221.64589 0.53 0.00032 0/0 0 0 25834034 HCD 30 MS2 22.92949 1020.7 82.599 66.2315 19672 19672 19669 QEplus033719.raw F4 1021.5 891.9 1072.1 838.2 1136 1164.4 294 3.38 1 FALSE 1.14E-05 5.36E-06 1.099 -250 93854 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RASVFVK [K].rASVFVk.[L] N-Term(TMT6plex); K7(TMT6plex) 6 Q3U9V1 TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1 E9Q1V0; F8WJK8; Q3U9V1; Q3U3N7; Q3TGW8; Q99L47 Hsc70-interacting protein (Fragment) OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1; Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; TPR_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=St13 PE=2 SV=1; Hsc70-interacting protein OS=Mus musculus OX=10090 GN=St13 PE=1 SV=1 1 2 2 0.3318 0 1 1 1 632.91132 1264.81536 1264.81416 0.94 0.0006 0/0 0 0 14869148 HCD 30 MS2 67.53642 1511.6 110 66.2365 19674 19674 19669 QEplus033719.raw F4 1531.9 1196.1 1604.4 1196.3 1870.3 1670.3 147 2.14 1 FALSE 0.007451 0.1211 -0.044 -250 93864 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQTSGQIVMPR [R].gQTSGQIVMPR.[G] N-Term(TMT6plex) 1 Q9D892 Inosine triphosphate pyrophosphatase OS=Mus musculus OX=10090 GN=Itpa PE=1 SV=2 Q9D892 Inosine triphosphate pyrophosphatase OS=Mus musculus OX=10090 GN=Itpa PE=1 SV=2 0 2 2 0.6968 0 1 1 1 701.88867 1402.77007 1402.7674 1.9 0.00133 0/0 0 0 8884087 HCD 30 MS2 0 409.6 110 66.2391 19675 19675 19669 QEplus033719.raw F4 414.9 324.9 444.8 375.7 420.5 476.6 359 3.76 1 FALSE 1.14E-05 7.89E-09 1.637 -250 93871 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAMSTQQIK [K].gAMSTQQIk.[K] N-Term(TMT6plex); K9(TMT6plex) 6 Q6XMP4 Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1 Q6XMP4; Q8R346; Q8BGQ7; Q6PDM7; Q3TZ32; Q3UD67 "Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=2; Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1" 0 2 2 0.6387 0 1 1 1 711.41406 1421.82085 1421.81866 1.54 0.0011 0/0 0 0 8777257 HCD 30 MS2 0 686.2 110 66.2416 19676 19676 19669 QEplus033719.raw F4 759.6 564.2 705 485.6 949.8 653 400 3.57 1 FALSE 1.14E-05 8.70E-07 1.249 -250 93880 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTVVPTKK [R].nTVVPTkk.[S] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 10 P20029 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q3U9G2; Q3U6V3; Q3TUS2; Q3UEM8; Q3U7T8; Q3TI47 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1 1 2 2 0.5845 0 1 1 1 787.51703 1574.02678 1574.02444 1.49 0.00117 0/0 0 0 8351757.5 HCD 30 MS2 54.05302 588.9 110 66.2441 19677 19677 19669 QEplus033719.raw F4 582.3 476.1 616.6 560.7 679.4 618.1 277 2.84 1 FALSE 0.0007626 0.0107 0.393 -250 93890 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTTIPTKK [R].nTTIPTkk.[S] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 1 2 2 0.4568 0 1 1 1 795.51495 1590.02263 1590.01935 2.06 0.00164 0/0 0 0 6208408 HCD 30 MS2 14.108 378.2 110 66.2466 19678 19678 19669 QEplus033719.raw F4 389.8 299.3 403.4 392.4 395.2 389.2 249 2.78 1 FALSE 0.0006216 0.009165 0.418 -250 93896 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RWGTDEVK [K].rWGTDEVk.[F] N-Term(TMT6plex); K8(TMT6plex) 7 Q7TMN7 Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1 Q7TMN7; D3Z0S1; F7ANV6; A0A0N4SV57; P97429; A0A0N4SW89; Q8BSL2 Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin A4 OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=4; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1 1 2 2 0.4641 0 1 1 1 724.91888 1448.83049 1448.82618 2.97 0.00215 0/0 0 0 4007473 HCD 30 MS2 13.92542 476.4 110 66.2491 19679 19679 19669 QEplus033719.raw F4 461.9 471 535.8 333 574.5 482.2 508 2.37 1 FALSE 0.006674 0.1058 -0.009 -250 93905 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVPTHTQVPVHR [K].lVPTHTQVPVHR.[R] N-Term(TMT6plex) 4 Q8C788 Sorting nexin OS=Mus musculus OX=10090 GN=Snx18 PE=1 SV=1 Q3U1H7; Q8C788; Q3UPB9; Q91ZR2 Sorting nexin OS=Mus musculus OX=10090 GN=Snx18 PE=2 SV=1; Sorting nexin OS=Mus musculus OX=10090 GN=Snx18 PE=1 SV=1; Sorting nexin OS=Mus musculus OX=10090 GN=Snx18 PE=2 SV=1; Sorting nexin-18 OS=Mus musculus OX=10090 GN=Snx18 PE=1 SV=1 0 4 4 0.6403 0 1 1 1 403.99277 1612.94924 1612.94848 0.47 0.00019 0/0 0 0 8109288 HCD 30 MS2 55.15508 606.6 110 66.2564 19681 19681 19680 QEplus033719.raw F4 649.7 445.8 632.7 488.6 678.8 743.7 364 4.42 1 FALSE 1.14E-05 2.33E-05 0.978 -250 93911 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMGSMPK [R].gMGSMPk.[R] N-Term(TMT6plex); K7(TMT6plex) 1 Q9WUM3 Coronin-1B OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1 Q9WUM3 Coronin-1B OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1 0 3 3 0.3763 0 1 1 1 389.22144 1165.64975 1165.64736 2.06 0.0008 0/0 0 0 4593096.5 HCD 30 MS2 27.82721 406.7 110 66.2589 19682 19682 19680 QEplus033719.raw F4 418.2 315.2 470.1 321.4 440.1 475.4 278 1.94 1 FALSE 0.00198 0.03471 0.195 -250 93920 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IEGVYAR [K].iEGVYAR.[D] N-Term(TMT6plex) 3 O55142 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2 O55142; Q9DC85; Q8BQV7 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1 0 2 2 0.4688 0 1 1 1 518.80292 1036.59856 1036.59886 -0.29 -0.00015 0/0 0 0 138205856 HCD 30 MS2 38.56539 812 6.463 66.2612 19683 19683 19680 QEplus033719.raw F4 749.7 682.4 918.6 787.2 891.8 842 159 2.56 1 FALSE 0.0006383 0.009801 0.408 -250 93948 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAVAPPGAPK [K].sAVAPPGAPk.[K] N-Term(TMT6plex); K10(TMT6plex) 4 Q8CCV1 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Gspt1 PE=2 SV=1 Q8CCV1; Q8BPH0; Q8R050; Q8R050-2 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Gspt1 PE=2 SV=1; Tr-type G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gspt1 PE=2 SV=1; Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus OX=10090 GN=Gspt1 PE=1 SV=2; Isoform 2 of Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus OX=10090 GN=Gspt1 0 2 2 0.6547 0 1 1 1 676.91968 1352.83208 1352.83021 1.38 0.00094 0/0 0 0 12098327 HCD 30 MS2 11.88732 749.5 110 66.2684 19686 19686 19680 QEplus033719.raw F4 774.7 636.5 824.3 565.1 915.3 781.1 238 3.33 1 FALSE 1.14E-05 8.44E-07 1.251 -250 93962 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGMFVK [R].hGMFVk.[D] N-Term(TMT6plex); K6(TMT6plex) 1 A2AUC9 Kelch-like protein 41 OS=Mus musculus OX=10090 GN=Klhl41 PE=1 SV=1 A2AUC9 Kelch-like protein 41 OS=Mus musculus OX=10090 GN=Klhl41 PE=1 SV=1 0 3 3 0.6 0 1 1 1 392.90457 1176.69916 1176.69636 2.38 0.00094 0/0 0 0 10420335 HCD 30 MS2 64.45049 958.1 85.357 66.2729 19688 19688 19680 QEplus033719.raw F4 1135.1 409.7 974.1 1220 579.3 1430.7 449 3.15 1 FALSE 0.001028 0.01346 0.353 -250 93980 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCHLLVATPGR [R].gcHLLVATPGR.[L] N-Term(TMT6plex); C2(Carbamidomethyl) 6 B9EKE9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1 B9EKE9; B7ZWF1; Q62095; Q3TQX5; P16381; Q3U484 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; ATP-dependent RNA helicase DDX3Y OS=Mus musculus OX=10090 GN=Ddx3y PE=1 SV=2; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=1; Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus OX=10090 GN=D1Pas1 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3y PE=2 SV=1 0 2 2 0.6489 0 1 1 1 705.39923 1409.79119 1409.78847 1.93 0.00136 0/0 0 0 3732318 HCD 30 MS2 0 403.8 110 66.2853 19692 19692 19691 QEplus033719.raw F4 395.8 369.7 441.8 334.4 477.9 403.1 383 3.76 1 FALSE 1.14E-05 4.65E-08 1.491 -250 93987 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPVIAQK [K].nPVIAQk.[I] N-Term(TMT6plex); K7(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 2 2 0.5254 0 1 1 1 614.39563 1227.78398 1227.78253 1.18 0.00073 0/0 0 0 82398640 HCD 30 MS2 38.56128 921.4 18.486 66.2898 19694 19694 19691 QEplus033719.raw F4 1019.3 777 1024.7 717.6 976.7 1012.9 122 2.95 1 FALSE 0.0006216 0.009204 0.418 -250 93996 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDASKNEEDEGK [K].iDASkNEEDEGk.[M] N-Term(TMT6plex); K5(TMT6plex); K12(TMT6plex) 2 G5E8G0 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1 G5E8G0; G3X9W0 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1 1 3 3 0.571 0 1 1 1 674.70422 2022.09812 2022.09583 1.13 0.00076 0/0 0 0 56244152 HCD 30 MS2 16.73495 1584.6 81.917 66.2921 19695 19695 19691 QEplus033719.raw F4 1553.5 1642.7 1766.9 1161.8 1861 1521.5 454 3.03 1 FALSE 1.14E-05 2.58E-07 1.349 -250 94004 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DPEMVK [K].dPEMVk.[D] N-Term(TMT6plex); K6(TMT6plex) 3 Q6XMP4 Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1 Q6XMP4; Q8BGQ7; Q3UD67 "Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1" 0 2 2 0.4412 0 1 1 1 588.83862 1176.66997 1176.66987 0.09 0.00005 0/0 0 0 40425920 HCD 30 MS2 22.04474 1301.3 35.907 66.2943 19696 19696 19691 QEplus033719.raw F4 1461.1 966.6 1368.8 1096.8 1490.3 1424.2 328 2.04 1 FALSE 0.004732 0.08319 0.053 -250 94014 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAQAWCYSK [K].rAQAWcYSk.[N] N-Term(TMT6plex); C6(Carbamidomethyl); K9(TMT6plex) 1 Q4FJQ0 Rab7 OS=Mus musculus OX=10090 GN=Rab7 PE=1 SV=1 Q4FJQ0 Rab7 OS=Mus musculus OX=10090 GN=Rab7 PE=1 SV=1 1 3 3 0.7031 0 1 1 1 543.29761 1627.87827 1627.8779 0.23 0.00012 0/0 0 0 39664792 HCD 30 MS2 17.27109 1163.8 46.9 66.2966 19697 19697 19691 QEplus033719.raw F4 1159.2 1035.4 1395.6 818 1195.1 1379.6 290 4.48 1 FALSE 1.14E-05 4.07E-08 1.501 -250 94020 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IETELR [RK].iETELR.[ED] N-Term(TMT6plex) 3 P63101 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 A0A2I3BQ03; Q8BWN0; P63101 14-3-3 protein zeta/delta (Fragment) OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1; 14_3_3 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; 14-3-3 protein zeta/delta OS=Mus musculus OX=10090 GN=Ywhaz PE=1 SV=1 0 2 2 0.1531 0 1 1 2 495.29623 989.58519 989.58288 2.34 0.00116 0/0 0 0 37455240 HCD 30 MS2 33.14266 1024.9 27.796 66.2989 19698 19698 19691 QEplus033719.raw F4 1098.5 857.7 1025.9 802.1 1324.2 1040.8 214 1.96 1 FALSE 0.003793 0.07164 0.083 -250 94021 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LETELR [RK].lETELR.[ED] N-Term(TMT6plex) 2 Q9R0A2; P11531 Dystrophin (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Dystrophin OS=Mus musculus OX=10090 GN=Dmd PE=1 SV=3 0 2 2 0.1531 0 1 2 3 495.29623 989.58519 989.58288 2.34 0.00116 0/0 0 0 37455240 HCD 30 MS2 33.14266 1024.9 27.796 66.2989 19698 19698 19691 QEplus033719.raw F4 1098.5 857.7 1025.9 802.1 1324.2 1040.8 214 1.96 1 FALSE 0.003793 0.07164 0.083 -250 94027 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIHEEALSK [K].qIHEEALSk.[F] N-Term(TMT6plex); K9(TMT6plex) 3 Q8K411 "Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1 PE=1 SV=1" Q8K411-2; Q8K411-3; Q8K411 "Isoform 2 of Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1; Isoform 3 of Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1; Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1 PE=1 SV=1" 0 3 3 0.4691 0 1 1 1 504.96552 1512.88199 1512.87861 2.23 0.00113 0/0 0 0 14532699 HCD 30 MS2 83.47642 1228 51.978 66.3011 19699 19699 19691 QEplus033719.raw F4 1400.7 883.3 1197.8 1000.6 1493.6 1392 387 4.05 1 FALSE 1.14E-05 2.67E-06 1.156 -250 94046 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITPEEAK [R].iTPEEAk.[Y] N-Term(TMT6plex); K7(TMT6plex) 5 P62702 "40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2" V9GWY0; Q545F8; P62702; Q3V1Z5; Q3UXQ6 "40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Gm15013 PE=3 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1; 40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4l PE=2 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1" 0 2 2 0.6145 0 1 1 1 623.37726 1245.74724 1245.74547 1.42 0.00088 0/0 0 0 493964640 HCD 30 MS2 4.552821 997 4.609 66.3135 19703 19703 19702 QEplus033719.raw F4 953.1 754.5 1110.7 869.1 1125.3 1169.6 467 2.62 1 FALSE 0.001632 0.02652 0.235 -250 94056 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVCDIPPR [K].tAVcDIPPR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 9 Q7TMM9; P99024; P68372; Q9CWF2 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1 Q7TMM9; Q9D6F9; Q62363; Q80ZV2; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2 "Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Beta-tubulin gene M-beta-2, 3' end (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1" 0 2 2 0.6864 0 1 1 1 629.34497 1257.68266 1257.68227 0.31 0.0002 0/0 0 0 75176136 HCD 30 MS2 26.82552 902.6 25.206 66.3157 19704 19704 19702 QEplus033719.raw F4 893.8 788.4 991.5 759 1049.3 933.8 231 2.87 4 FALSE 1.14E-05 3.93E-05 0.934 -250 94063 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIEPGCVR [K].vIEPGcVR.[V] N-Term(TMT6plex); C6(Carbamidomethyl) 2 Q3TFF0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja2 PE=2 SV=1 Q3TFF0; Q9QYJ0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja2 PE=2 SV=1; DnaJ homolog subfamily A member 2 OS=Mus musculus OX=10090 GN=Dnaja2 PE=1 SV=1 0 2 2 0.638 0 1 1 1 579.82922 1158.65117 1158.65024 0.8 0.00046 0/0 0 0 51300944 HCD 30 MS2 21.95421 1034.5 32.378 66.318 19705 19705 19702 QEplus033719.raw F4 1088.7 873.1 1115.9 841.2 1121.9 1166.2 356 2.79 1 FALSE 5.44E-05 0.001737 0.612 -250 94085 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SITGSYK [K].sITGSYk.[I] N-Term(TMT6plex); K7(TMT6plex) 5 Q8CFK5 Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1 Q8CFK5; Q8C292; Q8C1V4; Q8R2P8; Q3TIV6 Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=1 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=1 SV=1 0 2 2 0.2638 0 1 1 1 607.36432 1213.72136 1213.71926 1.73 0.00105 0/0 0 0 39300400 HCD 30 MS2 12.91159 1409.8 55.138 66.3248 19708 19708 19702 QEplus033719.raw F4 1501.9 1231.8 1479.5 1197.3 1597.1 1450.9 303 2.54 1 FALSE 0.00079 0.01093 0.39 -250 94095 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KMTDYAK [K].kMTDYAk.[K] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 9 Q9CX56 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=1 SV=2 Q9CX56; Q3TG45; Q99JB5; Q3TW90; Q9CPS5; Q3TI95; Q8BKP5; Q3U617; Q3TVY0 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=1 SV=2; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=1 SV=2; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=2 SV=1 1 3 3 0.5055 0 1 1 1 515.31097 1543.91837 1543.91211 4.05 0.00209 0/0 0 0 34161604 HCD 30 MS2 43.51538 1634.1 32.875 66.3271 19709 19709 19702 QEplus033719.raw F4 1703 1314.6 1787.2 1530 1652.8 1817 348 2.71 1 FALSE 0.001359 0.01942 0.286 -250 94100 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAMSTQQIK [K].gAMSTQQIk.[K] N-Term(TMT6plex); K9(TMT6plex) 6 Q6XMP4 Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1 Q6XMP4; Q8R346; Q8BGQ7; Q6PDM7; Q3TZ32; Q3UD67 "Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=2; Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1" 0 3 3 0.5463 0 1 1 1 474.61172 1421.82062 1421.81866 1.38 0.00066 0/0 0 0 31746102 HCD 30 MS2 43.14982 1335.9 62.297 66.3293 19710 19710 19702 QEplus033719.raw F4 1466.4 966.9 1353.2 1434.4 1257.6 1537 400 3.24 1 FALSE 0.0006035 0.008912 0.423 -250 94108 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQAGIEVK [K].sQAGIEVk.[K] N-Term(TMT6plex); K8(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.4605 0 1 1 1 645.39581 1289.78435 1289.78292 1.11 0.00071 0/0 0 0 22074826 HCD 30 MS2 0 1524.8 110 66.3319 19711 19711 19702 QEplus033719.raw F4 1728.9 540 1450.2 2165.1 784.9 2479.7 511 3.04 2 FALSE 1.14E-05 0.0002647 0.776 -250 94118 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVTYEEAK [R].dVTYEEAk.[Q] N-Term(TMT6plex); K8(TMT6plex) 7 Q50HX0; Q91V41 Ras-related protein Rab-14 OS=Mus musculus OX=10090 GN=Rab14 PE=2 SV=1;Ras-related protein Rab-14 OS=Mus musculus OX=10090 GN=Rab14 PE=1 SV=3 Q50HX0; Q50HX2; A0A2R8VHW9; Q91V41; Q50HW9; Q50HX1; Q50HX3 Ras-related protein Rab-14 OS=Mus musculus OX=10090 GN=Rab14 PE=2 SV=1; Ras-related protein Rab-14 OS=Mus musculus OX=10090 GN=Rab14 PE=2 SV=1; Ras-related protein Rab-14 (Fragment) OS=Mus musculus OX=10090 GN=Rab14 PE=1 SV=1; Ras-related protein Rab-14 OS=Mus musculus OX=10090 GN=Rab14 PE=1 SV=3; RAB14 protein variant OS=Mus musculus OX=10090 GN=Rab14 PE=2 SV=1; RAB14 protein variant OS=Mus musculus OX=10090 GN=Rab14 PE=2 SV=1; RAB14 protein variant OS=Mus musculus OX=10090 GN=Rab14 PE=1 SV=1 0 2 2 0.5684 0 1 1 1 706.88843 1412.76958 1412.76733 1.59 0.00112 0/0 0 0 15833502 HCD 30 MS2 11.85927 1134.3 110 66.3344 19712 19712 19702 QEplus033719.raw F4 1149.4 957.7 1254.2 1012.2 1216.3 1215.8 260 3.8 2 FALSE 1.14E-05 0.0001533 0.822 -250 94127 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NALGHIDK [K].nALGHIDk.[C] N-Term(TMT6plex); K8(TMT6plex) 2 Q6A065 Centrosomal protein of 170 kDa OS=Mus musculus OX=10090 GN=Cep170 PE=1 SV=2 Q6A065; H7BX26 Centrosomal protein of 170 kDa OS=Mus musculus OX=10090 GN=Cep170 PE=1 SV=2; Centrosomal protein of 170 kDa OS=Mus musculus OX=10090 GN=Cep170 PE=1 SV=1 0 3 3 0.5952 0 1 1 1 442.60358 1325.79618 1325.79416 1.52 0.00067 0/0 0 0 17399428 HCD 30 MS2 53.55447 1070.8 75.559 66.3417 19714 19714 19713 QEplus033719.raw F4 1105.7 920.5 1209 813.2 1100.2 1276.1 255 3.31 1 FALSE 1.14E-05 0.0004033 0.74 -250 94133 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQYPQSQACK [K].vQYPQSQAck.[M] N-Term(TMT6plex); C9(Carbamidomethyl); K10(TMT6plex) 1 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 2 2 0.5877 0 1 1 1 833.95233 1666.89739 1666.8987 -0.79 -0.00066 0/0 0 0 14371604 HCD 30 MS2 0 550.2 110 66.3442 19715 19715 19713 QEplus033719.raw F4 518.4 471.1 608.5 505.6 607.4 590.3 354 3.42 1 FALSE 1.14E-05 3.25E-07 1.33 -250 94149 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KSELSCAPK [K].kSELScAPk.[K] N-Term(TMT6plex); K1(TMT6plex); C6(Carbamidomethyl); K9(TMT6plex) 5 Q3TF74 Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1 Q3TF74; Q5PPQ7; Q3TEU8; Q9WUM4; Q3U8F0 Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin-1C OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1 1 3 3 0.6595 0 1 1 1 569.67487 1707.01004 1707.0078 1.31 0.00075 0/0 0 0 28790602 HCD 30 MS2 37.26975 1458.5 72.435 66.3487 19717 19717 19713 QEplus033719.raw F4 1442.5 1459.4 1539.3 1018.8 1966.6 1324.7 411 3.73 1 FALSE 1.14E-05 2.85E-07 1.341 -250 94182 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEALTSAK [K].tEALTSAk.[R] N-Term(TMT6plex); K8(TMT6plex) 6 P13020-2; Q3SX14 Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn;TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin Q3UCW8; Q3U9Q8; P13020-2; Q3TGJ9; P13020; Q3SX14 Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Gelsolin OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=3; TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin 0 2 2 0.4569 0 1 1 1 639.8877 1278.76811 1278.76694 0.92 0.00059 0/0 0 0 16927086 HCD 30 MS2 17.80017 1488.3 110 66.358 19721 19721 19713 QEplus033719.raw F4 1675.5 1152 1518 1217.7 1809.1 1557.4 322 3.13 2 TRUE 1.14E-05 0.0002041 0.798 -250 94190 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITHTGQVYDEK [K].iTHTGQVYDEk.[D] N-Term(TMT6plex); K11(TMT6plex) 3 P52503 "NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs6 PE=1 SV=2" P52503; A0A1Y7VKP8; A0A1Y7VM38 "NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs6 PE=1 SV=2; NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs6 PE=1 SV=1; NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs6 PE=1 SV=1" 0 3 3 0.7864 0 1 1 1 583.6579 1748.95914 1748.95832 0.47 0.00027 0/0 0 0 14601317 HCD 30 MS2 41.65121 1235.8 110 66.3605 19722 19722 19713 QEplus033719.raw F4 1265.2 998.1 1337.5 1166.5 1321.6 1325.7 414 4.4 1 FALSE 1.14E-05 5.18E-09 1.671 -250 94207 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLEGLSQR [K].dLEGLSQR.[L] N-Term(TMT6plex) 3 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 3 3 0.3488 0 1 1 1 382.8826 1146.63324 1146.63162 1.42 0.00054 0/0 0 0 12197985 HCD 30 MS2 17.19905 495.2 108.593 66.3703 19725 19725 19724 QEplus033719.raw F4 473.6 415 554.7 377.4 587.9 562.8 306 3.01 1 FALSE 4.43E-05 0.001455 0.628 -250 94217 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYPHWPAR [K].gYPHWPAR.[IV] N-Term(TMT6plex) 13 Q99JF8; P51859; Q3UMU9 PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1 PE=1 SV=1;Hepatoma-derived growth factor OS=Mus musculus OX=10090 GN=Hdgf PE=1 SV=2;Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2 PE=1 SV=1 Q3UMU9-4; Q99JF8; P51859; Q05CD2; Q3UMU9-3; Q3UMU9-2; Q9JMG7; Q9JMG7-2; Q99JF8-2; A2BI12; Q3UMU9; F6RB63; Q3TR90 Isoform 4 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1 PE=1 SV=1; Hepatoma-derived growth factor OS=Mus musculus OX=10090 GN=Hdgf PE=1 SV=2; Psip1 protein (Fragment) OS=Mus musculus OX=10090 GN=Psip1 PE=2 SV=1; Isoform 3 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Isoform 2 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Hepatoma-derived growth factor-related protein 3 OS=Mus musculus OX=10090 GN=Hdgfl3 PE=1 SV=2; Isoform 2 of Hepatoma-derived growth factor-related protein 3 OS=Mus musculus OX=10090 GN=Hdgfl3; Isoform 2 of PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1; PC4 and SFRS1-interacting protein OS=Mus musculus OX=10090 GN=Psip1 PE=1 SV=1; Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2 PE=1 SV=1; PC4 and SFRS1-interacting protein (Fragment) OS=Mus musculus OX=10090 GN=Psip1 PE=1 SV=1; PWWP domain-containing protein OS=Mus musculus OX=10090 GN=Hdgfl3 PE=2 SV=1 0 3 3 0.5948 0 1 1 1 404.88773 1212.64862 1212.64754 0.89 0.00036 0/0 0 0 18945200 HCD 30 MS2 29.17878 550.1 83.048 66.3725 19726 19726 19724 QEplus033719.raw F4 527.1 463.4 625.1 433.9 611.5 639.6 169 3.06 3 FALSE 0.0003905 0.006994 0.458 -250 94224 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETKLPGDK [K].eTkLPGDk.[G] N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex) 1 Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 1 3 3 0.5217 0 1 1 1 525.66296 1574.97434 1574.97207 1.44 0.00076 0/0 0 0 136574464 HCD 30 MS2 47.514 1340 9.69 66.3771 19728 19728 19724 QEplus033719.raw F4 1264.6 1112.2 1445.1 1228.7 1582.8 1406.6 334 2.3 1 FALSE 9.73E-05 0.002956 0.56 -250 94241 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLETTDRPDGHQNNLR [K].lLETTDRPDGHQNNLR.[S] N-Term(TMT6plex) 3 Q3TFE8 Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1 Q3TFE8; Q7TSZ6; P70168 Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1; Karyopherin (Importin) beta 1 OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1; Importin subunit beta-1 OS=Mus musculus OX=10090 GN=Kpnb1 PE=1 SV=2 0 4 4 0.7312 0 1 1 1 527.78217 2108.10683 2108.10459 1.06 0.00056 0/0 0 0 47100024 HCD 30 MS2 9.050968 369.7 22.243 66.3838 19731 19731 19724 QEplus033719.raw F4 390.9 330.6 396.7 297.2 465.4 337.5 335 6.51 1 FALSE 1.14E-05 1.96E-12 2.321 -250 94249 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TANDMIHAENMR [K].tANDMIHAENMR.[L] N-Term(TMT6plex) 3 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q3UF33; Q3TZQ2 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; ERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 0 3 3 0.7727 0 1 1 1 544.59985 1631.78501 1631.78313 1.15 0.00063 0/0 0 0 52305000 HCD 30 MS2 37.60668 691.7 22.741 66.3861 19732 19732 19724 QEplus033719.raw F4 686.4 553.9 717.2 606.2 844.1 742.5 93 4.4 1 FALSE 1.14E-05 6.71E-09 1.65 -250 94255 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLTDVGIRR [K].kLTDVGIRR.[I] N-Term(TMT6plex); K1(TMT6plex) 1 P51174 "Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=2" P51174 "Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=2" 2 4 4 0.5143 0 1 1 1 379.74911 1515.97463 1515.97352 0.73 0.00028 0/0 0 0 14238985 HCD 30 MS2 28.85114 1104.5 97.065 66.3884 19733 19733 19724 QEplus033719.raw F4 1195.4 921.2 1214.9 1085.8 990.7 1218.9 211 3.15 1 FALSE 2.26E-05 0.001048 0.658 -250 94265 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KATEIAASK [K].kATEIAASk.[D] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 1 3 3 0.5974 0 1 1 1 536.01208 1606.0217 1606.01427 4.63 0.00248 0/0 0 0 14515072 HCD 30 MS2 36.35015 1237.8 95.241 66.3906 19734 19734 19724 QEplus033719.raw F4 1456 639.7 1198.1 1672.1 897.2 1564 219 3.8 1 FALSE 1.14E-05 9.50E-07 1.242 -250 94279 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STYQDKPSTPAEK [R].sTYQDkPSTPAEk.[K] N-Term(TMT6plex); K6(TMT6plex); K13(TMT6plex) 14 Q8CE80 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1 Q8CE04; P51125-4; P51125-7; A0A338P6J9; Q921U7; P51125-6; Q8CB83; Q8C281; Q8CE80; Q3TTN2; P51125; A0A1Y7VJN8; P51125-3; P51125-2 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 4 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Isoform 7 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 6 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=2 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=2 SV=1; Calpastatin OS=Mus musculus OX=10090 GN=Cast PE=1 SV=2; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 3 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Isoform 2 of Calpastatin OS=Mus musculus OX=10090 GN=Cast 0 3 3 0.6615 0 1 1 1 713.73523 2139.19114 2139.19006 0.5 0.00036 0/0 0 0 13042992 HCD 30 MS2 0 677 110 66.4004 19737 19737 19735 QEplus033719.raw F4 658.5 642.7 774.1 543.5 814.4 629.1 477 3.25 1 FALSE 1.14E-05 1.00E-09 1.807 -250 94311 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLVVAESEK [K].rLVVAESEk.[S] N-Term(TMT6plex); K9(TMT6plex) 1 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 1 3 3 0.5184 0 1 1 1 496.97672 1488.91559 1488.915 0.4 0.0002 0/0 0 0 20137882 HCD 30 MS2 63.8712 1650.2 79.05 66.4095 19741 19741 19735 QEplus033719.raw F4 1786.9 1417.3 1718 1219.5 1926.5 1832.7 352 3.53 1 FALSE 1.14E-05 3.02E-06 1.146 -250 94330 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NKYEDEINKR [KR].nkYEDEINkR.[T] N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex) 15 P04264 "SWISS-PROT:P04264 Tax_Id=9606 Gene_Symbol=KRT1 Keratin, type II cytoskeletal 1" H-INV:HIT000016045; Q4L0E7; P02538; Q678L1; Q8VED5; Q5XQN5; P48668; P11679; Q6IFZ6; P04264; Q08EK4; P04259; P05787; Q922U2; P13647 "Tax_Id=9606 Gene_Symbol=- Similar to Keratin, type II cytoskeletal 8; Type II cytokeratin Kb39 (Fragment) OS=Mus musculus OX=10090 GN=Krt77 PE=2 SV=1; SWISS-PROT:P02538 Tax_Id=9606 Gene_Symbol=KRT6A Keratin, type II cytoskeletal 6A; Keratin 1b (Fragment) OS=Mus musculus OX=10090 GN=Krt77 PE=2 SV=1; TREMBL:Q8VED5 Tax_Id=10090 Gene_Symbol=Krt79 Keratin 79; SWISS-PROT:Q5XQN5 (Bos taurus) Keratin, type II cytoskeletal 5; SWISS-PROT:P48668 Tax_Id=9606 Gene_Symbol=KRT6C Keratin, type II cytoskeletal 6C; Keratin, type II cytoskeletal 8 OS=Mus musculus OX=10090 GN=Krt8 PE=1 SV=4; SWISS-PROT:Q6IFZ6 Tax_Id=10090 Gene_Symbol=Krt77 Keratin, type II cytoskeletal 1b; SWISS-PROT:P04264 Tax_Id=9606 Gene_Symbol=KRT1 Keratin, type II cytoskeletal 1; Keratin 77 OS=Mus musculus OX=10090 GN=Krt77 PE=2 SV=1; SWISS-PROT:P04259 Tax_Id=9606 Gene_Symbol=KRT6B Keratin, type II cytoskeletal 6B; SWISS-PROT:P05787 Tax_Id=9606 Gene_Symbol=KRT8 Keratin, type II cytoskeletal 8; SWISS-PROT:Q922U2 Tax_Id=10090 Gene_Symbol=Krt5 Keratin, type II cytoskeletal 5; SWISS-PROT:P13647 Tax_Id=9606 Gene_Symbol=KRT5 Keratin, type II cytoskeletal 5" 2 4 4 0.4832 0 1 1 1 499.79178 1996.14528 1996.14305 1.12 0.00056 0/0 0 0 17921978 HCD 30 MS2 47.41718 1344.1 93.137 66.414 19743 19743 19735 QEplus033719.raw F4 1450.8 1213 1046.1 1764.7 1172.1 1417.9 422 2.38 1 TRUE 0.0004091 0.007287 0.452 -250 94347 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSSLPESSPSK [R].tSSLPESSPSk.[T] N-Term(TMT6plex); K11(TMT6plex) 4 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q8CD09; Q9ERG0; Q8C7S2; Q8BT15 LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 0 2 2 0.6491 0 1 1 1 789.44354 1577.87981 1577.87867 0.72 0.00057 0/0 0 0 16373666 HCD 30 MS2 16.57022 418.8 110 66.4258 19747 19747 19746 QEplus033719.raw F4 369.4 428.5 552.5 266.1 458.9 437.5 415 3.79 1 FALSE 1.14E-05 7.41E-10 1.832 -250 94355 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADEMYDK [K].aDEMYDk.[C] N-Term(TMT6plex); K7(TMT6plex) 3 Q9CZW5 Mitochondrial import receptor subunit TOM70 OS=Mus musculus OX=10090 GN=Tomm70 PE=1 SV=2 Q9CZW5; Q3TSX8; Q80TT4 Mitochondrial import receptor subunit TOM70 OS=Mus musculus OX=10090 GN=Tomm70 PE=1 SV=2; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Tomm70a PE=2 SV=1; MKIAA0719 protein (Fragment) OS=Mus musculus OX=10090 GN=Tomm70a PE=2 SV=1 0 2 2 0.5572 0 1 1 1 665.3421 1329.67693 1329.67607 0.64 0.00043 0/0 0 0 16858998 HCD 30 MS2 12.3072 1301.6 110 66.4283 19748 19748 19746 QEplus033719.raw F4 1324.6 1162.7 1394.6 1222.5 1338.4 1367.1 141 2.71 1 FALSE 0.001028 0.01332 0.354 -250 94359 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHLGTALK [K].aHLGTALk.[A] N-Term(TMT6plex); K8(TMT6plex) 5 Q9CWI9 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1 Q497E1; Q9CSN9; Q9CWI9; Q9CZI5; P62267 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 (Fragment) OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=1 SV=3 0 3 3 0.5455 0 1 1 1 423.60812 1268.80982 1268.80908 0.58 0.00025 0/0 0 0 109634160 HCD 30 MS2 7.540814 490.3 10.579 66.4306 19749 19749 19746 QEplus033719.raw F4 438.5 428.4 614.6 374.8 510.1 575.7 94 3.85 1 FALSE 1.14E-05 9.81E-06 1.049 -250 94384 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDIAGR [R].iDIAGR.[D] N-Term(TMT6plex) 2 P61164 Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1 P61164; A0A494BB86 Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1; Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1 0 2 2 0.2699 0 1 1 1 437.27225 873.53722 873.53553 1.93 0.00084 0/0 0 0 13301731 HCD 30 MS2 56.34561 846 63.251 66.4398 19753 19753 19746 QEplus033719.raw F4 935.9 727.6 890.3 653.8 944.9 923.5 114 2.26 1 FALSE 0.002056 0.03721 0.185 -250 94385 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDIAGR [R].lDIAGR.[D] N-Term(TMT6plex) 2 Q5SW83 Uncharacterized protein OS=Mus musculus OX=10090 GN=Actr2 PE=1 SV=1 Q5SW83; Q8BMA4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Actr2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.2699 0 1 2 2 437.27225 873.53722 873.53553 1.93 0.00084 0/0 0 0 13301731 HCD 30 MS2 56.34561 846 63.251 66.4398 19753 19753 19746 QEplus033719.raw F4 935.9 727.6 890.3 653.8 944.9 923.5 114 2.26 1 FALSE 0.002056 0.03721 0.185 -250 94386 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDLAGR [R].lDLAGR.[D] N-Term(TMT6plex) 39 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61275; Q3UAF6; Q3UD81; Q3U122; E9Q1F2; Q3UAA9; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; Q3UAF7; G3UZ07; Q3TIJ9; P62737; P68134; Q61276; Q3UBP6; D3YZY0; A0A0U1RQ96; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=3 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 0 2 2 0.2699 0 1 3 3 437.27225 873.53722 873.53553 1.93 0.00084 0/0 0 0 13301731 HCD 30 MS2 56.34561 846 63.251 66.4398 19753 19753 19746 QEplus033719.raw F4 935.9 727.6 890.3 653.8 944.9 923.5 114 2.26 4 FALSE 0.002056 0.03721 0.185 -250 94401 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLAELK [K].hLAELk.[R] N-Term(TMT6plex); K6(TMT6plex) 9 D3Z7X7 Tumor protein D52 (Fragment) OS=Mus musculus OX=10090 GN=Tpd52 PE=1 SV=1 D3Z7X7; F8WHQ1; Q62393-2; E9PUA7; D3Z637; D3Z2U2; D3Z125; Q62393; Q62393-3 Tumor protein D52 (Fragment) OS=Mus musculus OX=10090 GN=Tpd52 PE=1 SV=1; Tumor protein D52 OS=Mus musculus OX=10090 GN=Tpd52 PE=1 SV=1; Isoform 2 of Tumor protein D52 OS=Mus musculus OX=10090 GN=Tpd52; Tumor protein D52 OS=Mus musculus OX=10090 GN=Tpd52 PE=1 SV=1; Tumor protein D52 OS=Mus musculus OX=10090 GN=Tpd52 PE=1 SV=1; Tumor protein D52 (Fragment) OS=Mus musculus OX=10090 GN=Tpd52 PE=1 SV=1; Tumor protein D52 (Fragment) OS=Mus musculus OX=10090 GN=Tpd52 PE=1 SV=1; Tumor protein D52 OS=Mus musculus OX=10090 GN=Tpd52 PE=1 SV=2; Isoform 3 of Tumor protein D52 OS=Mus musculus OX=10090 GN=Tpd52 0 3 3 0.1935 0 1 1 2 390.25366 1168.74643 1168.74541 0.87 0.00034 0/0 0 0 7817249 HCD 30 MS2 7.5183 630.4 110 66.4449 19755 19755 19746 QEplus033719.raw F4 604.8 548.5 643.8 512.4 777.3 695.5 99 3.41 1 FALSE 4.43E-05 0.001652 0.617 -250 94410 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TANDMIHAENMR [K].tANDMIHAENMR.[L] N-Term(TMT6plex) 3 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q3UF33; Q3TZQ2 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; ERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 0 2 2 0.7946 0 1 1 1 816.39557 1631.78386 1631.78313 0.45 0.00037 0/0 0 0 6890103.5 HCD 30 MS2 0 337.5 110 66.4474 19756 19756 19746 QEplus033719.raw F4 353.8 291.3 353.6 267.5 426.1 333 96 4.04 1 FALSE 1.14E-05 1.48E-10 1.964 -250 94422 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLPEGNICR [K].qLPEGNIcR.[H] N-Term(TMT6plex); C8(Carbamidomethyl) 2 Q3TDN8 AB hydrolase-1 domain-containing protein OS=Mus musculus OX=10090 GN=Bphl PE=2 SV=1 Q3TDN8; Q8R164 AB hydrolase-1 domain-containing protein OS=Mus musculus OX=10090 GN=Bphl PE=2 SV=1; Valacyclovir hydrolase OS=Mus musculus OX=10090 GN=Bphl PE=1 SV=1 0 2 2 0.5927 0 1 1 1 658.35352 1315.69975 1315.69899 0.58 0.00038 0/0 0 0 7570608 HCD 30 MS2 24.96298 500.2 110 66.4572 19759 19759 19757 QEplus033719.raw F4 551.4 355 552.5 510 410.3 622.1 229 2.75 1 FALSE 1.14E-05 0.000107 0.851 -250 94439 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVVYENAYGR [K].kVVYENAYGR.[F] N-Term(TMT6plex); K1(TMT6plex) 3 Q9JMH6 "Thioredoxin reductase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Txnrd1 PE=1 SV=3" Q9JMH6-2; A0A1W2P6U1; Q9JMH6 "Isoform 2 of Thioredoxin reductase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Txnrd1; Thioredoxin reductase 1, cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Txnrd1 PE=1 SV=1; Thioredoxin reductase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Txnrd1 PE=1 SV=3" 1 3 3 0.7287 0 1 1 1 552.9881 1656.94974 1656.94736 1.44 0.00079 0/0 0 0 25046694 HCD 30 MS2 19.74601 1171.4 72.104 66.4617 19761 19761 19757 QEplus033719.raw F4 1274.4 1134.6 1243.6 941.1 1365.4 1069.5 353 3.87 1 FALSE 1.14E-05 4.11E-08 1.501 -250 94448 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESKEETPEVTK [K].eSkEETPEVTk.[T] N-Term(TMT6plex); K3(TMT6plex); K11(TMT6plex) 6 B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 A0PJ96; P14873; Q3TZM8; Q8CAI9; B2RQQ5; Q8CFR9 Mtap1b protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Mtap1b protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 1 3 3 0.5766 0 1 1 1 655.37787 1964.11905 1964.1155 1.81 0.00118 0/0 0 0 24334770 HCD 30 MS2 6.643105 1242.6 110 66.4642 19762 19762 19757 QEplus033719.raw F4 1231.3 1035.4 1391.7 1024.3 1344 1429 468 4.11 1 FALSE 1.14E-05 3.27E-09 1.709 -250 94470 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YEQGTGCWQGPNR [K].yEQGTGcWQGPNR.[S] N-Term(TMT6plex); C7(Carbamidomethyl) 3 Q3U518 Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=2 SV=1 Q3U518; Q3TWG2; O08795-2 Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=2 SV=1; Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=2 SV=1; Isoform 2 of Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh 0 2 2 0.8188 0 1 1 1 891.41406 1781.82085 1781.82268 -1.03 -0.00092 0/0 0 0 9291622 HCD 30 MS2 0 324.9 110 66.4741 19766 19766 19757 QEplus033719.raw F4 319.3 291 363.7 300.6 360 314.5 50 4.8 1 FALSE 1.14E-05 1.15E-10 1.986 -250 94474 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEGNDLVK [K].eEGNDLVk.[K] N-Term(TMT6plex); K8(TMT6plex) 2 Q9CYG7 Mitochondrial import receptor subunit TOM34 OS=Mus musculus OX=10090 GN=Tomm34 PE=1 SV=1 Q9CYG7; Q9CYG7-2 Mitochondrial import receptor subunit TOM34 OS=Mus musculus OX=10090 GN=Tomm34 PE=1 SV=1; Isoform 2 of Mitochondrial import receptor subunit TOM34 OS=Mus musculus OX=10090 GN=Tomm34 0 2 2 0.4396 0 1 1 1 681.38916 1361.77104 1361.76767 2.48 0.00169 0/0 0 0 7252246 HCD 30 MS2 54.84307 727.1 110 66.4766 19767 19767 19757 QEplus033719.raw F4 747.5 567.1 775.7 619.4 808.9 844 470 2.98 1 FALSE 0.000262 0.005287 0.494 -250 94485 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IYEQDEEK [K].iYEQDEEk.[Q] N-Term(TMT6plex); K8(TMT6plex) 5 Q9CPV4 Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=1 F6ZTG3; E9Q197; Q9CPV4-2; Q9CPV4; Q9CPV4-3 Glyoxalase domain-containing protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=1; Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=1; Isoform 2 of Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4; Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=1; Isoform 3 of Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4 0 2 2 0.3793 0 1 1 1 756.40515 1511.80303 1511.79936 2.42 0.00183 0/0 0 0 6437156.5 HCD 30 MS2 0 471.8 110 66.4865 19770 19770 19768 QEplus033719.raw F4 505.5 431.7 520.6 442.5 442.6 488.1 297 3.48 1 FALSE 1.14E-05 0.0001402 0.829 -250 94493 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDNLTYR [K].vDNLTYR.[T] N-Term(TMT6plex) 3 Q8C671 Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=2 SV=1 Q06477; Q8C671; Q62093 IFN-response element binding factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Srsf2 PE=2 SV=1; Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=2 SV=1; Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=1 SV=4 0 2 2 0.428 0 1 1 1 555.31201 1109.61675 1109.61524 1.36 0.00075 0/0 0 0 113299328 HCD 30 MS2 17.13094 830.3 13.824 66.4887 19771 19771 19768 QEplus033719.raw F4 869.7 778.3 921.6 621.1 999.6 791.7 183 2.64 1 FALSE 0.0008718 0.01193 0.374 -250 94497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMQDAEVSK [K].aMQDAEVSk.[S] N-Term(TMT6plex); K9(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 0 3 3 0.6305 0 1 1 1 479.59964 1436.78437 1436.78194 1.69 0.00081 0/0 0 0 85420320 HCD 30 MS2 8.588063 628.7 21.676 66.491 19772 19772 19768 QEplus033719.raw F4 652.1 468.8 697.7 652.3 560.6 740.5 345 3.41 1 FALSE 1.14E-05 0.000698 0.694 -250 94536 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YGQLSGK [R].yGQLSGk.[V] N-Term(TMT6plex); K7(TMT6plex) 2 Q564F6 Programmed cell death 5 OS=Mus musculus OX=10090 GN=Pdcd5 PE=1 SV=1 D3Z7Q5; Q564F6 Programmed cell death protein 5 OS=Mus musculus OX=10090 GN=Pdcd5 PE=1 SV=1; Programmed cell death 5 OS=Mus musculus OX=10090 GN=Pdcd5 PE=1 SV=1 0 2 2 0.5385 0 1 1 1 605.86481 1210.72234 1210.71959 2.27 0.00137 0/0 0 0 31639126 HCD 30 MS2 32.43579 1440.2 68.078 66.5023 19777 19777 19768 QEplus033719.raw F4 1393.4 1154.1 1578.2 1374.2 1564.2 1577.4 197 2.34 1 FALSE 0.001083 0.01401 0.345 -250 94546 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHLGTALK [K].aHLGTALk.[A] N-Term(TMT6plex); K8(TMT6plex) 5 Q9CWI9 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1 Q497E1; Q9CSN9; Q9CWI9; Q9CZI5; P62267 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 (Fragment) OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=2 SV=1; 40S ribosomal protein S23 OS=Mus musculus OX=10090 GN=Rps23 PE=1 SV=3 0 2 2 0.5768 0 1 1 1 634.90894 1268.81059 1268.80908 1.2 0.00076 0/0 0 0 29355264 HCD 30 MS2 19.00412 1312.7 58.928 66.5046 19778 19778 19768 QEplus033719.raw F4 1208.8 1154 1557.5 1069.7 1422.1 1464.3 79 2.67 1 FALSE 2.26E-05 0.001078 0.655 -250 94572 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NKEEAAEYAK [K].nkEEAAEYAk.[L] N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex) 2 Q5BLK1 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1 Q3TL53; Q5BLK1 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1 1 3 3 0.7228 0 1 1 1 614.01959 1840.04422 1840.04194 1.24 0.00076 0/0 0 0 175767392 HCD 30 MS2 16.93196 821.6 6.781 66.5167 19782 19782 19779 QEplus033719.raw F4 894.4 709 912.5 667 887.4 859 449 5.23 1 FALSE 1.14E-05 5.18E-10 1.861 -250 94577 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IYHQLK [R].iYHQLk.[K] N-Term(TMT6plex); K6(TMT6plex) 5 Q7TPT7 Valyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1 Q3U3D3; G3UY93; Q3TII4; Q7TPT7; Q9Z1Q9 Valyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1; Valyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Vars PE=1 SV=1; Valyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1; Valyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Vars PE=2 SV=1; Valine--tRNA ligase OS=Mus musculus OX=10090 GN=Vars1 PE=1 SV=1 0 3 3 0.1325 0 1 1 1 420.60104 1259.78858 1259.78761 0.77 0.00032 0/0 0 0 43525340 HCD 30 MS2 30.3111 472.6 16.563 66.5212 19784 19784 19779 QEplus033719.raw F4 471.9 391.9 500.4 382.4 523.4 565.4 485 3.02 1 FALSE 0.001213 0.01641 0.316 -250 94613 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YEQGTGCWQGPNR [K].yEQGTGcWQGPNR.[S] N-Term(TMT6plex); C7(Carbamidomethyl) 3 Q3U518 Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=2 SV=1 Q3U518; Q3TWG2; O08795-2 Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=2 SV=1; Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh PE=2 SV=1; Isoform 2 of Glucosidase 2 subunit beta OS=Mus musculus OX=10090 GN=Prkcsh 0 3 3 0.7644 0 1 1 1 594.61285 1781.82401 1781.82268 0.74 0.00044 0/0 0 0 9806606 HCD 30 MS2 21.5699 376.9 110 66.5305 19788 19788 19779 QEplus033719.raw F4 377.1 310.5 401.6 319.7 452.1 400.1 51 5.73 1 FALSE 1.14E-05 5.47E-08 1.477 -250 94663 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSSLPESSPSK [R].tSSLPESSPSk.[T] N-Term(TMT6plex); K11(TMT6plex) 4 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q8CD09; Q9ERG0; Q8C7S2; Q8BT15 LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 0 3 3 0.5653 0 1 1 1 526.63196 1577.88132 1577.87867 1.68 0.00088 0/0 0 0 56223236 HCD 30 MS2 23.67538 952.5 26.815 66.5518 19796 19796 19790 QEplus033719.raw F4 933 779.5 1116.7 820.8 1056.6 1008.5 422 4.44 1 FALSE 1.14E-05 1.96E-06 1.182 -250 94676 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSSPEPVTHLK [K].sSSPEPVTHLk.[W] N-Term(TMT6plex); K11(TMT6plex) 4 Q8BQW4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Arhgap1 PE=2 SV=1 Q8BQW4; A0A2X0SSA9; Q5FWK3; A2AH25 Uncharacterized protein OS=Mus musculus OX=10090 GN=Arhgap1 PE=2 SV=1; ARHGAP1 (Fragment) OS=Mus musculus OX=10090 GN=ARHGAP1 PE=4 SV=1; Rho GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Arhgap1 PE=1 SV=1; Rho GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Arhgap1 PE=1 SV=1 0 3 3 0.6702 0 1 1 1 547.31897 1639.94236 1639.94194 0.25 0.00014 0/0 0 0 26910762 HCD 30 MS2 17.50478 945.4 64.142 66.5586 19799 19799 19790 QEplus033719.raw F4 988.7 802.6 1013.5 746.4 1166.7 954.3 381 4.7 1 FALSE 1.14E-05 1.19E-10 1.983 -250 94691 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENQWCEEK [K].eNQWcEEk.[-] N-Term(TMT6plex); C5(Carbamidomethyl); K8(TMT6plex) 2 Q9WTX5 S-phase kinase-associated protein 1 OS=Mus musculus OX=10090 GN=Skp1 PE=1 SV=3 Q3TL58; Q9WTX5 S-phase kinase-associated protein 1 OS=Mus musculus OX=10090 GN=Skp1 PE=2 SV=1; S-phase kinase-associated protein 1 OS=Mus musculus OX=10090 GN=Skp1 PE=1 SV=3 0 2 2 0.4406 0 1 1 1 790.89392 1580.78057 1580.77791 1.68 0.00133 0/0 0 0 22579312 HCD 30 MS2 27.63117 889 82.789 66.5682 19802 19802 19801 QEplus033719.raw F4 893.7 807.7 991.2 677.4 1044.4 919.6 119 3.2 1 FALSE 2.26E-05 0.001056 0.657 -250 94714 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FGVAEPR [K].fGVAEPR.[K] N-Term(TMT6plex) 1 Q9CPQ1 Cytochrome c oxidase subunit 6C OS=Mus musculus OX=10090 GN=Cox6c PE=1 SV=3 Q9CPQ1 Cytochrome c oxidase subunit 6C OS=Mus musculus OX=10090 GN=Cox6c PE=1 SV=3 0 2 2 0.4754 0 1 1 1 502.79034 1004.57341 1004.57265 0.76 0.00038 0/0 0 0 60320552 HCD 30 MS2 17.95792 726.4 16.611 66.5772 19806 19806 19801 QEplus033719.raw F4 736.9 520.6 769.9 816 686.2 829 284 2.44 1 FALSE 0.0008991 0.01238 0.368 -250 94719 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVGKDVSDEK [K].eVGkDVSDEk.[L] N-Term(TMT6plex); K4(TMT6plex); K10(TMT6plex) 2 Q9CZU6 "Citrate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Cs PE=1 SV=1" Q0QEL9; Q9CZU6 "Citrate synthase (Fragment) OS=Mus musculus OX=10090 GN=Cs PE=2 SV=1; Citrate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Cs PE=1 SV=1" 1 3 3 0.5405 0 1 1 1 598.3476 1793.02823 1793.02595 1.27 0.00076 0/0 0 0 53522204 HCD 30 MS2 11.90639 1144.9 32.619 66.5795 19807 19807 19801 QEplus033719.raw F4 1107.6 1170.7 1248.4 1356.5 925.5 1061 461 3.09 1 FALSE 1.14E-05 4.40E-07 1.305 -250 94727 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVQTPLLR [R].rVQTPLLR.[A] N-Term(TMT6plex) 3 Q80UG5 Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 Q80UG5-3; Q80UG5; A2A6U3 Isoform 3 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 1 3 3 0.4788 0 1 1 1 404.59845 1211.7808 1211.77856 1.85 0.00075 0/0 0 0 45549424 HCD 30 MS2 58.8325 387.7 12.073 66.5817 19808 19808 19801 QEplus033719.raw F4 399.6 313.3 447.4 288 406.9 470.9 72 3.78 1 FALSE 0.0001504 0.003477 0.543 -250 94744 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KIEISQHAK [K].kIEISQHAk.[Y] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 4 Q5M9N6 Rpl37a protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1 Q5M9N6; Q4VAF2; Q9CYW3; Q3TLC1 Rpl37a protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1; Ribosomal protein L37a OS=Mus musculus OX=10090 GN=Rpl37a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1 1 4 4 0.5131 0 1 1 1 436.02921 1741.09499 1741.09392 0.62 0.00027 0/0 0 0 31407730 HCD 30 MS2 29.71784 786.7 47.46 66.5885 19811 19811 19801 QEplus033719.raw F4 846.1 724 587.9 927.3 1259.7 375.2 168 4.21 1 FALSE 1.14E-05 7.14E-06 1.075 -250 94749 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVNQQEFVR [K].dVNQQEFVR.[A] N-Term(TMT6plex) 7 Q5M9P3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1 D3YUT3; D3Z722; S4R223; D3Z5R8; Q5M9P3; Q9CZX8; D3YUG3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=2; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=1; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=1; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=8; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=3; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=8 0 2 2 0.6495 0 1 1 1 682.36359 1363.7199 1363.71674 2.31 0.00158 0/0 0 0 38290480 HCD 30 MS2 19.7547 835 56.012 66.5958 19813 19813 19812 QEplus033719.raw F4 910.6 625.6 841 856.5 785.1 991.4 285 3.68 1 FALSE 1.14E-05 4.34E-06 1.116 -250 94761 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGCPWK [K].gGcPWk.[E] N-Term(TMT6plex); C3(Carbamidomethyl); K6(TMT6plex) 4 Q9JK81 MYG1 exonuclease OS=Mus musculus OX=10090 GN=Myg1 PE=1 SV=1 Q8R038; F8WGG3; F7A3N3; Q9JK81 Melanocyte proliferating gene 1 OS=Mus musculus OX=10090 GN=Myg1 PE=2 SV=1; MYG1 exonuclease (Fragment) OS=Mus musculus OX=10090 GN=Myg1 PE=1 SV=1; MYG1 exonuclease (Fragment) OS=Mus musculus OX=10090 GN=Myg1 PE=1 SV=1; MYG1 exonuclease OS=Mus musculus OX=10090 GN=Myg1 PE=1 SV=1 0 2 2 0.4251 0 1 1 1 581.82648 1162.64568 1162.64432 1.17 0.00068 0/0 0 0 28869606 HCD 30 MS2 39.82613 1136.6 28.126 66.6026 19816 19816 19812 QEplus033719.raw F4 1121 1075.4 1197.2 906.2 1442.6 1077.1 343 2.07 1 FALSE 0.00484 0.0848 0.049 -250 94779 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VISVSTSER [R].vISVSTSER.[T] N-Term(TMT6plex) 5 G5E896 Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=1 A0A0R4J1Q0; Q3UJB9-2; G5E896; Q3UJB9; D6RE33 Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=1; Isoform 2 of Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4; Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=1; Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=2; Enhancer of mRNA-decapping protein 4 OS=Mus musculus OX=10090 GN=Edc4 PE=1 SV=1 0 2 2 0.2683 0 1 1 1 603.84821 1206.68913 1206.68913 0 0 0/0 0 0 14256274 HCD 30 MS2 48.93824 875.5 48.219 66.6071 19818 19818 19812 QEplus033719.raw F4 809.6 740.6 933.2 785.9 1010.2 973.2 397 1.64 1 FALSE 0.0008718 0.01216 0.371 -250 94788 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHFQHLMK [K].aHFQHLMk.[S] N-Term(TMT6plex); K8(TMT6plex) 17 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 F6XCT0; Q9QXZ0-3; B1ARU4; F6SHS0; E9QA63; E9QNP1; Q3UPG9; Q5DTZ2; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8 Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; MKIAA1251 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 4 4 0.6086 0 1 1 1 368.21689 1469.84572 1469.84515 0.39 0.00014 0/0 0 0 13573877 HCD 30 MS2 30.82424 432.9 46.771 66.6094 19819 19819 19812 QEplus033719.raw F4 384.8 245.5 578.7 397.7 261.6 729.3 342 3.04 3 FALSE 0.0001401 0.003201 0.551 -250 94794 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVPSATVRPR [R].lVPSATVRPR.[G] N-Term(TMT6plex) 1 Q14CH7 "Alanine--tRNA ligase, mitochondrial OS=Mus musculus OX=10090 GN=Aars2 PE=1 SV=1" Q14CH7 "Alanine--tRNA ligase, mitochondrial OS=Mus musculus OX=10090 GN=Aars2 PE=1 SV=1" 0 3 3 0.4663 0 1 1 1 442.28085 1324.82801 1324.82624 1.34 0.00059 0/0 0 0 9457479 HCD 30 MS2 41.11587 1047.9 85.771 66.6116 19820 19820 19812 QEplus033719.raw F4 1026.5 830.8 1243.8 975.9 940.2 1270.1 152 3.26 1 FALSE 0.001108 0.01439 0.34 -250 94803 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQGVMVGMGQK [R-].hQGVMVGMGQk.[D] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3UCF8; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 2 2 0.7344 0 1 1 1 815.45441 1629.90154 1629.89692 2.83 0.00231 0/0 0 0 8649911 HCD 30 MS2 8.903728 811.4 110 66.6141 19821 19821 19812 QEplus033719.raw F4 952.9 660.9 922.8 631.2 812.4 888.1 376 4.18 4 FALSE 1.14E-05 8.74E-10 1.818 -250 94815 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEVQSLSK [K].qEVQSLSk.[E] N-Term(TMT6plex); K8(TMT6plex) 3 E9PWE8 Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 E9PWE8; Q62188; Q3TT92 Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 0 2 2 0.4646 0 1 1 1 688.91229 1376.81731 1376.81495 1.71 0.00118 0/0 0 0 99083480 HCD 30 MS2 10.69462 815.8 19.008 66.624 19824 19824 19823 QEplus033719.raw F4 833.4 645.9 822.1 629.5 1223.1 741.1 407 3.25 1 FALSE 1.14E-05 0.0005511 0.714 -250 94822 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETGVIEK [R].eTGVIEk.[L] N-Term(TMT6plex); K7(TMT6plex) 5 Q3U1S6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1 Q3U1S6; Q8JZN2; Q3U4S7; Q3TXH7; Q80TP8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; MKIAA0885 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1 0 2 2 0.324 0 1 1 1 617.37848 1233.74968 1233.74547 3.41 0.0021 0/0 0 0 10656433 HCD 30 MS2 0 1025.1 110 66.6265 19825 19825 19823 QEplus033719.raw F4 1111.3 831.1 1049 844.3 1220.2 1094.8 452 2.87 1 FALSE 0.0008183 0.01119 0.386 -250 94827 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGYVIYR [K].qGYVIYR.[I] N-Term(TMT6plex) 3 Q5M8Q0 Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1 Q5M8Q0; Q3U7D2; B8JKK2 Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1; Ribosomal protein L15 OS=Mus musculus OX=10090 GN=Rpl15 PE=2 SV=1; Ribosomal protein L15 (Fragment) OS=Mus musculus OX=10090 GN=Rpl15 PE=1 SV=1 0 2 2 0.5364 0 1 1 1 564.32489 1127.6425 1127.64106 1.28 0.00072 0/0 0 0 99216296 HCD 30 MS2 11.0856 802 14.728 66.6288 19826 19826 19823 QEplus033719.raw F4 709.5 717.2 959.1 719 865.6 841.4 145 2.2 1 FALSE 0.001506 0.02213 0.264 -250 94836 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESVFTVEGGHR [R].eSVFTVEGGHR.[A] N-Term(TMT6plex) 2 O35129 Prohibitin-2 OS=Mus musculus OX=10090 GN=Phb2 PE=1 SV=1 O35129; Q3V2V2 Prohibitin-2 OS=Mus musculus OX=10090 GN=Phb2 PE=1 SV=1; Prohibitin OS=Mus musculus OX=10090 GN=Phb2 PE=2 SV=1 0 3 3 0.7214 0 1 1 1 482.92334 1446.75547 1446.75386 1.11 0.00054 0/0 0 0 69544240 HCD 30 MS2 44.07523 930.9 20.611 66.631 19827 19827 19823 QEplus033719.raw F4 1650.7 402.8 627.6 1233.2 832.6 838.5 247 3.23 1 FALSE 1.14E-05 0.0004957 0.723 -250 94873 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETGVIEK [R].eTGVIEk.[L] N-Term(TMT6plex); K7(TMT6plex) 5 Q3U1S6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1 Q3U1S6; Q8JZN2; Q3U4S7; Q3TXH7; Q80TP8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; MKIAA0885 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1 0 2 2 0.3187 0 1 1 1 617.37848 1233.74968 1233.74547 3.41 0.0021 0/0 0 0 10656433 HCD 30 MS2 0 1025.1 101.37 66.6427 19832 19832 19823 QEplus033719.raw F4 1111.3 831.1 1049 844.3 1220.2 1094.8 452 2.73 1 FALSE 0.0008899 0.01233 0.368 -250 94895 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCEAGYSPSYK [K].scEAGYSPSYk.[E] N-Term(TMT6plex); C2(Carbamidomethyl); K11(TMT6plex) 4 P10605 Cathepsin B OS=Mus musculus OX=10090 GN=Ctsb PE=1 SV=2 P10605; Q6LAF6; Q3TC17; Q3TVS6 Cathepsin B OS=Mus musculus OX=10090 GN=Ctsb PE=1 SV=2; Cathepsin B (Fragment) OS=Mus musculus OX=10090 GN=Ctsb PE=2 SV=1; Cathepsin B OS=Mus musculus OX=10090 GN=Ctsb PE=2 SV=1; Cathepsin B OS=Mus musculus OX=10090 GN=Ctsb PE=2 SV=1 0 2 2 0.7372 0 1 1 1 853.927 1706.84673 1706.84599 0.43 0.00037 0/0 0 0 5938117.5 HCD 30 MS2 0 384.4 110 66.6551 19836 19836 19834 QEplus033719.raw F4 407.1 326.1 454.5 306.6 468.6 343.7 163 4.49 1 FALSE 1.14E-05 3.64E-10 1.89 -250 94908 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYNALK [K].kYNALk.[I] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 2 Q9DCX2 "ATP synthase subunit d, mitochondrial OS=Mus musculus OX=10090 GN=Atp5pd PE=1 SV=3" Q9DCX2; B1ASE2 "ATP synthase subunit d, mitochondrial OS=Mus musculus OX=10090 GN=Atp5pd PE=1 SV=3; ATP synthase subunit d, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Atp5h PE=1 SV=1" 1 3 3 0.4066 0 1 1 1 475.3136 1423.92624 1423.924 1.58 0.00075 0/0 0 0 68082816 HCD 30 MS2 18.3469 1437.1 24.909 66.6618 19839 19839 19834 QEplus033719.raw F4 1506.9 903.2 1405.7 2099.2 1264.9 1443 102 2.41 1 FALSE 0.005628 0.09464 0.021 -250 94932 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEEPVEYK [K].gEEPVEYk.[S] N-Term(TMT6plex); K8(TMT6plex) 3 Q80YP5 Integrin alpha 5 (Fibronectin receptor alpha) OS=Mus musculus OX=10090 GN=Itga5 PE=2 SV=1 Q3U7M6; Q80YP5; P11688 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Itga5 PE=2 SV=1; Integrin alpha 5 (Fibronectin receptor alpha) OS=Mus musculus OX=10090 GN=Itga5 PE=2 SV=1; Integrin alpha-5 OS=Mus musculus OX=10090 GN=Itga5 PE=1 SV=3 0 2 2 0.4596 0 1 1 1 704.89038 1408.77349 1408.77242 0.76 0.00053 0/0 0 0 10545525 HCD 30 MS2 9.191639 716.4 110 66.6711 19843 19843 19834 QEplus033719.raw F4 722.6 621 760.4 597.1 900.6 696.6 384 2.72 1 FALSE 1.14E-05 0.0003816 0.745 -250 94946 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGSCMK [K].iGScMk.[S] N-Term(TMT6plex); C4(Carbamidomethyl); K6(TMT6plex) 7 E9QAI5 Aspartate carbamoyltransferase OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1 B2RQC6-2; E9QAI5; E9QAT6; B2RQC6; G3UWN2; Q6P9L1; Q7TN13 Isoform 2 of CAD protein OS=Mus musculus OX=10090 GN=Cad; Aspartate carbamoyltransferase OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1; CAD protein OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1; CAD protein OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1; CAD protein OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1; Cad protein (Fragment) OS=Mus musculus OX=10090 GN=Cad PE=2 SV=1; Cad protein (Fragment) OS=Mus musculus OX=10090 GN=Cad PE=2 SV=1 0 2 2 0.2863 0 1 1 1 577.32745 1153.64763 1153.64736 0.24 0.00014 0/0 0 0 13090954 HCD 30 MS2 0 1233 110 66.6807 19846 19846 19845 QEplus033719.raw F4 1248.1 1119.4 1245.3 923.8 1654.7 1206.8 179 2.27 1 FALSE 0.004483 0.08012 0.061 -250 94962 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQGVMVGMGQK [R-].hQGVMVGMGQk.[D] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3UCF8; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 4 4 0.7478 0 1 1 1 408.23001 1629.89821 1629.89692 0.79 0.00032 0/0 0 0 61784988 HCD 30 MS2 23.03335 513.9 22.974 66.6877 19849 19849 19845 QEplus033719.raw F4 550.9 423.3 587.3 398.6 509.6 613.4 381 4.52 4 FALSE 1.14E-05 5.88E-06 1.091 -250 94979 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FAEQTLR [K].fAEQTLR.[Q] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.3273 0 1 1 1 547.31433 1093.62139 1093.62032 0.97 0.00053 0/0 0 0 24545402 HCD 30 MS2 43.64035 1470.7 70.266 66.6922 19851 19851 19845 QEplus033719.raw F4 1552.7 1239.8 1524.5 1182.3 1791.6 1533.3 249 2.2 2 FALSE 0.001591 0.02486 0.245 -250 95005 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIQCLTVHR [K].sIQcLTVHR.[N] N-Term(TMT6plex); C4(Carbamidomethyl) 8 O88342 WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3 Q3TNK2; O88342; Q9DC08; Q3TE06; Q3U136; A0A0J9YU05; Q9DBM8; Q80ZI9 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat domain 1 (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1 0 3 3 0.6736 0 1 1 1 448.25403 1342.74753 1342.74627 0.94 0.00042 0/0 0 0 17350962 HCD 30 MS2 55.27647 680.8 53.554 66.699 19854 19854 19845 QEplus033719.raw F4 757.5 566.3 757.8 598.2 733.7 671.2 278 4.35 1 FALSE 1.14E-05 3.68E-06 1.13 -250 95012 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSSAPAMK [K].vSSAPAMk.[Q] N-Term(TMT6plex); K8(TMT6plex) 7 Q91YE8 Synaptopodin-2 OS=Mus musculus OX=10090 GN=Synpo2 PE=1 SV=2 Q91YE8-2; B2RY03; Q91YE8; E9Q1U2; D3YVV9; A0A498WGE8; A0A0G2JDM5 Isoform 2 of Synaptopodin-2 OS=Mus musculus OX=10090 GN=Synpo2; Synaptopodin 2 OS=Mus musculus OX=10090 GN=Synpo2 PE=2 SV=1; Synaptopodin-2 OS=Mus musculus OX=10090 GN=Synpo2 PE=1 SV=2; Synaptopodin-2 OS=Mus musculus OX=10090 GN=Synpo2 PE=1 SV=1; Synaptopodin-2 OS=Mus musculus OX=10090 GN=Synpo2 PE=1 SV=1; Synaptopodin-2 OS=Mus musculus OX=10090 GN=Synpo2 PE=1 SV=1; Synaptopodin-2 (Fragment) OS=Mus musculus OX=10090 GN=Synpo2 PE=1 SV=1 0 2 2 0.251 0 1 1 1 624.87677 1248.74626 1248.73861 6.13 0.00382 0/0 0 0 14797720 HCD 30 MS2 23.80605 1410.3 110 66.7015 19855 19855 19845 QEplus033719.raw F4 1440.4 894.9 1550.2 1411 1295.1 1870.4 508 2.43 1 FALSE 0.0005556 0.008288 0.434 -250 95022 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLEGLSQR [K].dLEGLSQR.[L] N-Term(TMT6plex) 3 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 2 2 0.1954 0 1 1 1 573.82013 1146.63298 1146.63162 1.19 0.00068 0/0 0 0 19754120 HCD 30 MS2 42.26574 960.8 42.126 66.7088 19857 19857 19856 QEplus033719.raw F4 890.7 660.2 1098.6 890.2 908.6 1316.7 318 2.61 1 FALSE 0.0003408 0.006529 0.467 -250 95036 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGLQHLR [K].lGLQHLR.[S] N-Term(TMT6plex) 1 P84084 ADP-ribosylation factor 5 OS=Mus musculus OX=10090 GN=Arf5 PE=1 SV=2 P84084 ADP-ribosylation factor 5 OS=Mus musculus OX=10090 GN=Arf5 PE=1 SV=2 0 3 3 0.4727 0 1 1 1 355.89612 1065.6738 1065.67303 0.72 0.00026 0/0 0 0 27606430 HCD 30 MS2 8.578931 285.4 48.471 66.7181 19861 19861 19856 QEplus033719.raw F4 259.3 241.7 343.8 219.8 306.1 341.5 24 3.3 1 FALSE 0.001368 0.01953 0.285 -250 95052 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YQQLQK [K].yQQLQk.[YD] N-Term(TMT6plex); K6(TMT6plex) 3 Q03958 Prefoldin subunit 6 OS=Mus musculus OX=10090 GN=Pfdn6 PE=1 SV=1 Q8CJ27; Q03958; A0A3Q4EBT3 Abnormal spindle-like microcephaly-associated protein homolog OS=Mus musculus OX=10090 GN=Aspm PE=1 SV=2; Prefoldin subunit 6 OS=Mus musculus OX=10090 GN=Pfdn6 PE=1 SV=1; Prefoldin subunit 6 OS=Mus musculus OX=10090 GN=Pfdn6 PE=1 SV=1 0 2 2 0.3413 0 1 1 1 633.38489 1265.7625 1265.76179 0.56 0.00035 0/0 0 0 14167812 HCD 30 MS2 16.81852 1178.4 110 66.7229 19863 19863 19856 QEplus033719.raw F4 1122.4 978.4 1271.9 1103 1266.6 1328 394 2.52 1 FALSE 0.005131 0.08814 0.039 -250 95068 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAEEFTK [K].nAEEFTk.[K] N-Term(TMT6plex); K7(TMT6plex) 4 Q3TIH9; Q561N4 UBC core domain-containing protein OS=Mus musculus OX=10090 GN=Ube2l3 PE=2 SV=1;Ubiquitin-conjugating enzyme E2L 3 OS=Mus musculus OX=10090 GN=Ube2l3 PE=1 SV=1 Q3TIH9; A0A338P7E5; Q3TW19; Q561N4 UBC core domain-containing protein OS=Mus musculus OX=10090 GN=Ube2l3 PE=2 SV=1; Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus OX=10090 GN=Ube2l3 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ube2l3 PE=2 SV=1; Ubiquitin-conjugating enzyme E2L 3 OS=Mus musculus OX=10090 GN=Ube2l3 PE=1 SV=1 0 2 2 0.4818 0 1 1 1 648.86334 1296.71941 1296.71999 -0.45 -0.00029 0/0 0 0 6146146 HCD 30 MS2 27.5306 924.6 110 66.7301 19866 19866 19856 QEplus033719.raw F4 1046.4 829.2 943.8 742.5 1059.7 925.9 339 2.74 2 FALSE 0.0002909 0.005886 0.481 -250 95075 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQPTAIIAK [K].hQPTAIIAk.[T] N-Term(TMT6plex); K9(TMT6plex) 1 P40142 Transketolase OS=Mus musculus OX=10090 GN=Tkt PE=1 SV=1 P40142 Transketolase OS=Mus musculus OX=10090 GN=Tkt PE=1 SV=1 0 3 3 0.6502 0 1 1 1 479.63815 1436.89991 1436.89896 0.66 0.00032 0/0 0 0 45676572 HCD 30 MS2 37.65136 818.8 35.781 66.7374 19868 19868 19867 QEplus033719.raw F4 935.1 715.2 848.3 741 870.7 802.7 254 4.26 1 FALSE 1.14E-05 2.49E-06 1.162 -250 95102 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVVPNEVVVQR [K].hVVPNEVVVQR.[L] N-Term(TMT6plex) 9 A0A0J9YUQ8; P13020-2; Q3SX14 Actin-depolymerizing factor (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1;Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn;TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin A0A0J9YUJ8; A6PWS5; Q3UCW8; Q3U9Q8; A0A0J9YUQ8; P13020-2; Q3TGJ9; P13020; Q3SX14 Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1; Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1; Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Gelsolin OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=3; TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin 0 3 3 0.71 0 1 1 1 502.29858 1504.8812 1504.87973 0.98 0.00049 0/0 0 0 33604496 HCD 30 MS2 46.60827 803.2 41.075 66.7442 19871 19871 19867 QEplus033719.raw F4 896.4 639.7 830.9 838 844.8 769.1 501 4.31 3 TRUE 1.14E-05 1.96E-07 1.372 -250 95180 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVMEEAK [R].nVMEEAk.[G] N-Term(TMT6plex); K7(TMT6plex) 1 O55029 Coatomer subunit beta' OS=Mus musculus OX=10090 GN=Copb2 PE=1 SV=2 O55029 Coatomer subunit beta' OS=Mus musculus OX=10090 GN=Copb2 PE=1 SV=2 0 2 2 0.4377 0 1 1 1 639.86066 1278.71404 1278.71279 0.97 0.00062 0/0 0 0 18341174 HCD 30 MS2 52.99504 1225.4 77.993 66.7749 19883 19883 19878 QEplus033719.raw F4 1253.4 1039.1 1303.8 973.2 1525.5 1257.4 406 3.13 1 FALSE 0.0001603 0.003837 0.532 -250 95190 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAYGPNGMNK [R].tAYGPNGMNk.[M] N-Term(TMT6plex); K10(TMT6plex) 7 Q6A0F1 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1 Q9CS06; Q8BVY8; Q3UKQ2; Q6A0F1; H3BL49; P42932; Q9WVS5 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1; T-complex protein 1 subunit theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=3; CCT-theta OS=Mus musculus OX=10090 GN=Cctq PE=3 SV=1 0 2 2 0.6961 0 1 1 1 755.90808 1510.80889 1510.80882 0.04 0.00003 0/0 0 0 14794026 HCD 30 MS2 35.59082 1032.9 110 66.7797 19885 19885 19878 QEplus033719.raw F4 1090.2 824.5 1171.5 953.8 1049.5 1107.8 325 3.62 1 FALSE 1.14E-05 8.17E-05 0.874 -250 95198 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPIPQTK [K].tPIPQTk.[F] N-Term(TMT6plex); K7(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.5622 0 1 1 1 621.89532 1242.78337 1242.78219 0.95 0.00059 0/0 0 0 12677421 HCD 30 MS2 41.8643 938.9 110 66.7822 19886 19886 19878 QEplus033719.raw F4 1090.6 403.9 838.3 1470 463.8 1366.8 218 2.49 2 FALSE 0.002233 0.04326 0.163 -250 95205 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVVPNEVVVQR [K].hVVPNEVVVQR.[L] N-Term(TMT6plex) 9 A0A0J9YUQ8; P13020-2; Q3SX14 Actin-depolymerizing factor (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1;Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn;TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin A0A0J9YUJ8; A6PWS5; Q3UCW8; Q3U9Q8; A0A0J9YUQ8; P13020-2; Q3TGJ9; P13020; Q3SX14 Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1; Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1; Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Gelsolin OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=3; TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin 0 2 2 0.6645 0 1 1 1 752.94598 1504.88469 1504.87973 3.3 0.00248 0/0 0 0 5360951.5 HCD 30 MS2 0 307.2 110 66.7847 19887 19887 19878 QEplus033719.raw F4 321.6 291.3 345.4 246.1 331.9 307.1 473 3.1 3 TRUE 1.14E-05 2.51E-07 1.352 -250 95214 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VPVHVIR [K].vPVHVIR.[M] N-Term(TMT6plex) 1 O08912 Polypeptide N-acetylgalactosaminyltransferase 1 OS=Mus musculus OX=10090 GN=Galnt1 PE=1 SV=1 O08912 Polypeptide N-acetylgalactosaminyltransferase 1 OS=Mus musculus OX=10090 GN=Galnt1 PE=1 SV=1 0 3 3 0.7134 0 1 1 1 350.23318 1048.685 1048.68287 2.04 0.00071 0/0 0 0 4912958 HCD 30 MS2 49.9493 206.3 110 66.7872 19888 19888 19878 QEplus033719.raw F4 200.9 174 231.5 154.2 240.2 237 51 3.28 1 FALSE 0.0001603 0.003607 0.539 -250 95228 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKKDDTDDEIAK [K].akkDDTDDEIAk.[Y] N-Term(TMT6plex); K2(TMT6plex); K3(TMT6plex); K12(TMT6plex) 2 Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 Q3TXE5; Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 2 4 4 0.5326 0 1 1 1 567.08356 2265.3124 2265.31079 0.71 0.0004 0/0 0 0 49123964 HCD 30 MS2 21.41775 1455.1 60.315 66.7967 19891 19891 19889 QEplus033719.raw F4 1402.2 1162.9 1531.9 1400.5 1747.4 1485.7 424 4.3 1 FALSE 1.14E-05 1.82E-05 0.998 -250 95247 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMQDAEVSK [K].aMQDAEVSk.[S] N-Term(TMT6plex); K9(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 0 2 2 0.6512 0 1 1 1 718.89551 1436.78374 1436.78194 1.25 0.0009 0/0 0 0 24044640 HCD 30 MS2 22.70951 899.9 85.569 66.8035 19894 19894 19889 QEplus033719.raw F4 826.8 710.3 1047.2 927 880.3 1008 354 3.67 1 FALSE 1.14E-05 2.40E-06 1.165 -250 95256 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEVSIQNNK [K].aEVSIQNNk.[D] N-Term(TMT6plex); K9(TMT6plex) 1 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 0 2 2 0.4167 0 1 1 1 730.92755 1460.84783 1460.84731 0.35 0.00026 0/0 0 0 6135808 HCD 30 MS2 0 609.4 110 66.8085 19896 19896 19889 QEplus033719.raw F4 617.8 660.8 622.2 415.2 831.1 509.6 465 3.72 1 FALSE 1.14E-05 1.89E-06 1.185 -250 95268 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIGAVK [K].eIGAVk.[Y] N-Term(TMT6plex); K6(TMT6plex) 5 Q9D859 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rac1 PE=2 SV=1 Q9D859; Q3TLP8; Q8BPG5; Q8C4N8; K7Q7T7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rac1 PE=2 SV=1; Ras-related C3 botulinum toxin substrate 1 OS=Mus musculus OX=10090 GN=Rac1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rac1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rac1 PE=2 SV=1; RAS-related C3 botulinum substrate 1 OS=Mus musculus OX=10090 GN=Rac1 PE=1 SV=1 0 2 2 0.0937 0 1 1 1 537.85114 1074.69499 1074.69232 2.49 0.00134 0/0 0 0 28421714 HCD 30 MS2 61.56384 1174.3 32.201 66.8133 19898 19898 19889 QEplus033719.raw F4 1286.9 1028.1 1157.7 1018.9 1490.3 1063.6 151 1.92 1 FALSE 0.004757 0.08352 0.052 -250 95284 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQTAEKEEFEHQQK [K].nQTAEkEEFEHQQk.[E] N-Term(TMT6plex); K6(TMT6plex); K14(TMT6plex) 15 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 1 4 4 0.5966 0 1 1 1 609.08032 2433.29946 2433.29771 0.72 0.00044 0/0 0 0 20059900 HCD 30 MS2 11.62132 1021.9 110 66.8229 19901 19901 19900 QEplus033719.raw F4 1128.7 898.2 1199.1 858.2 909.6 1137.6 437 4.71 1 FALSE 1.14E-05 3.65E-11 2.08 -250 95292 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCAAEPEVEPEAHEGDGDKK [K].scAAEPEVEPEAHEGDGDkk.[G] N-Term(TMT6plex); C2(Carbamidomethyl); K19(TMT6plex); K20(TMT6plex) 2 P51859 Hepatoma-derived growth factor OS=Mus musculus OX=10090 GN=Hdgf PE=1 SV=2 P51859; E0CXA0 Hepatoma-derived growth factor OS=Mus musculus OX=10090 GN=Hdgf PE=1 SV=2; Hepatoma-derived growth factor (Fragment) OS=Mus musculus OX=10090 GN=Hdgf PE=1 SV=1 1 4 4 0.8473 0 1 1 1 711.35974 2842.41713 2842.41321 1.38 0.00098 0/0 0 0 11219796 HCD 30 MS2 5.030488 348 110 66.8254 19902 19902 19900 QEplus033719.raw F4 379.7 268.2 388.2 282.6 383.2 386.2 276 7.14 1 FALSE 1.14E-05 6.31E-16 3.639 -250 95305 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNGSLETK [K].vNGSLETk.[Y] N-Term(TMT6plex); K8(TMT6plex) 6 Q60932 Voltage-dependent anion-selective channel protein 1 OS=Mus musculus OX=10090 GN=Vdac1 PE=1 SV=3 F2Z471; Q3THL7; Q60932; Q3U6K8; Q60932-2; Q3TIG8 Voltage-dependent anion-selective channel protein 1 OS=Mus musculus OX=10090 GN=Vdac1 PE=1 SV=1; Voltage-dependent anion-selective channel protein 1 OS=Mus musculus OX=10090 GN=Vdac1 PE=2 SV=1; Voltage-dependent anion-selective channel protein 1 OS=Mus musculus OX=10090 GN=Vdac1 PE=1 SV=3; Voltage-dependent anion-selective channel protein 1 OS=Mus musculus OX=10090 GN=Vdac1 PE=2 SV=1; Isoform Mt-VDAC1 of Voltage-dependent anion-selective channel protein 1 OS=Mus musculus OX=10090 GN=Vdac1; Voltage-dependent anion-selective channel protein 1 OS=Mus musculus OX=10090 GN=Vdac1 PE=2 SV=1 0 2 2 0.4466 0 1 1 1 653.3927 1305.77812 1305.77784 0.22 0.00014 0/0 0 0 58057008 HCD 30 MS2 40.02209 1298.9 35.723 66.83 19904 19904 19900 QEplus033719.raw F4 1419.3 1098.7 1385.5 1122 1386.7 1381.4 448 2.62 1 FALSE 1.14E-05 0.0003415 0.755 -250 95313 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEEGPTLSYGR [R].tEEGPTLSYGR.[D] N-Term(TMT6plex) 6 Q6ZQ61 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1 Q6ZQ61; Q4FJT0; A0A494BAZ2; Q3TTX0; Q9R0U5; Q5BL18 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matr3 protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin-3 (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin3 OS=Mus musculus OX=10090 PE=4 SV=1; Matrin 3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1 0 2 2 0.6942 0 1 1 1 719.8725 1438.73772 1438.73754 0.12 0.00009 0/0 0 0 18803394 HCD 30 MS2 38.98546 878.8 110 66.8347 19906 19906 19900 QEplus033719.raw F4 810.5 738.6 1021.4 790.5 920.2 991.8 206 3.99 1 FALSE 1.14E-05 8.57E-09 1.63 -250 95325 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRDYLVR [R].vRDYLVR.[K] N-Term(TMT6plex) 4 O08582 GTP-binding protein 1 OS=Mus musculus OX=10090 GN=Gtpbp1 PE=1 SV=2 A0A2R8VI47; O08582; A0A2R8W6M4; A0A2R8W6Z1 GTP-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Gtpbp1 PE=1 SV=1; GTP-binding protein 1 OS=Mus musculus OX=10090 GN=Gtpbp1 PE=1 SV=2; GTP-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Gtpbp1 PE=1 SV=1; GTP-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Gtpbp1 PE=1 SV=1 1 3 3 0.342 0 1 1 1 383.90298 1149.6944 1149.69416 0.21 0.00008 0/0 0 0 9820586 HCD 30 MS2 45.81961 421.1 110 66.844 19910 19910 19900 QEplus033719.raw F4 398.5 355.7 477.5 325.2 472.6 496.8 290 3.45 1 FALSE 1.14E-05 0.0007506 0.687 -250 95335 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVCDIPPR [K].tAVcDIPPR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 9 Q7TMM9; P99024; P68372; Q9CWF2 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1 Q7TMM9; Q9D6F9; Q62363; Q80ZV2; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2 "Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Beta-tubulin gene M-beta-2, 3' end (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1" 0 2 2 0.6601 0 1 1 1 629.34534 1257.6834 1257.68227 0.89 0.00056 0/0 0 0 57983016 HCD 30 MS2 5.466165 703.6 35.853 66.8513 19912 19912 19911 QEplus033719.raw F4 720.1 626.1 740.5 553.7 855.7 725.5 232 3.03 4 FALSE 1.14E-05 6.34E-05 0.895 -250 95347 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVNQQEFVR [K].dVNQQEFVR.[A] N-Term(TMT6plex) 7 Q5M9P3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1 D3YUT3; D3Z722; S4R223; D3Z5R8; Q5M9P3; Q9CZX8; D3YUG3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=2; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=1; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=1; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=8; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=3; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=8 0 3 3 0.5662 0 1 1 1 455.24411 1363.71778 1363.71674 0.76 0.00034 0/0 0 0 16604983 HCD 30 MS2 62.08551 510 49.463 66.8583 19915 19915 19911 QEplus033719.raw F4 475.4 424.7 547.8 460.3 555.3 596.5 276 3.02 1 FALSE 2.26E-05 0.0009649 0.665 -250 95352 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASAPATPLSPTR [R].aSAPATPLSPTR.[L] N-Term(TMT6plex) 2 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 P14733; Q8C553 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3; IF rod domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Lmnb1 PE=2 SV=1 0 2 2 0.6709 0 1 1 1 699.40216 1397.79704 1397.79499 1.47 0.00103 0/0 0 0 11135984 HCD 30 MS2 0 607.6 110 66.8608 19916 19916 19911 QEplus033719.raw F4 586.2 636.2 681.5 377.2 807.1 557.6 321 3.92 1 FALSE 1.14E-05 9.22E-08 1.434 -250 95360 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGTGTETPMIGDR [R].eGTGTETPMIGDR.[V] N-Term(TMT6plex) 1 P30416 Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=5 P30416 Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=5 0 2 2 0.7568 0 1 1 1 796.89423 1592.78118 1592.77875 1.52 0.00121 0/0 0 0 10111096 HCD 30 MS2 0 394.8 110 66.8634 19917 19917 19911 QEplus033719.raw F4 366 443.4 435.6 300.5 488.4 334.8 115 4.44 1 FALSE 1.14E-05 3.37E-13 2.466 -250 95367 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIQCLTVHR [K].sIQcLTVHR.[N] N-Term(TMT6plex); C4(Carbamidomethyl) 8 O88342 WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3 Q3TNK2; O88342; Q9DC08; Q3TE06; Q3U136; A0A0J9YU05; Q9DBM8; Q80ZI9 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat domain 1 (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1 0 2 2 0.6713 0 1 1 1 671.87811 1342.74895 1342.74627 1.99 0.00134 0/0 0 0 4812024 HCD 30 MS2 0 478.5 110 66.8659 19918 19918 19911 QEplus033719.raw F4 502.2 424.8 453.8 316.3 757.4 416.3 277 3.59 1 FALSE 1.14E-05 3.47E-05 0.945 -250 95385 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KDPEQEVEK [R].kDPEQEVEk.[F] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 6 Q99MR6 Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1 Q99MR6-3; Q99MR6; Q99MR6-4; A0A0G2JDF8; Q99MR6-2; A0A0G2JG65 Isoform C of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1; Isoform D of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Arsenite-resistance protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1; Isoform B of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Arsenite-resistance protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1 1 3 3 0.6211 0 1 1 1 597.0155 1789.03196 1789.03104 0.51 0.00031 0/0 0 0 22765666 HCD 30 MS2 3.494854 1315.9 81.666 66.8729 19921 19921 19911 QEplus033719.raw F4 1286 966.3 1373.4 1442.2 1114 1713.3 457 3.22 1 FALSE 1.14E-05 1.50E-06 1.204 -250 95393 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KDEQEHEFYK [K].kDEQEHEFYk.[-] N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex) 8 Q569X4 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1 A0A140LIZ5; Q8BKU2; Q569X4; Q3TJ97; Q52L53; Q3TUN5; Q3TFA5; P54775 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=1 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; Psmc4 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT3 OS=Mus musculus OX=10090 GN=Psmc4 PE=2 SV=1; 26S proteasome regulatory subunit 6B OS=Mus musculus OX=10090 GN=Psmc4 PE=1 SV=2 1 4 4 0.5819 0 1 1 1 510.78082 2040.10146 2040.10052 0.46 0.00024 0/0 0 0 17913404 HCD 30 MS2 46.50142 747.2 48.394 66.8802 19923 19923 19922 QEplus033719.raw F4 832 584.3 814.2 683 787.5 782.1 389 3.97 1 FALSE 1.14E-05 1.72E-06 1.193 -250 95397 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITLTCGR [K].iTLTcGR.[D] N-Term(TMT6plex); C5(Carbamidomethyl) 4 Q5XJY5 Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=1 SV=2 Q5XJY5; Q8R1S6; Q3U4S9; Q3TDU1 Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=1 SV=2; Coatomer subunit delta (Fragment) OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1; Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1; Coatomer subunit delta (Fragment) OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1 0 2 2 0.505 0 1 1 1 525.30334 1049.59941 1049.59748 1.84 0.00097 0/0 0 0 45223992 HCD 30 MS2 55.19855 1201.6 27.364 66.8847 19925 19925 19922 QEplus033719.raw F4 1233.6 1023.1 1307.9 1001.4 1449.8 1194 214 2 1 FALSE 0.001464 0.0212 0.271 -250 95414 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DMNQNLAK [K].dMNQNLAk.[E] N-Term(TMT6plex); K8(TMT6plex) 1 Q3V3R1 "Monofunctional C1-tetrahydrofolate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Mthfd1l PE=1 SV=2" Q3V3R1 "Monofunctional C1-tetrahydrofolate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Mthfd1l PE=1 SV=2" 0 2 2 0.5856 0 1 1 1 696.3905 1391.77373 1391.77171 1.45 0.00101 0/0 0 0 7882477 HCD 30 MS2 13.14018 742 110 66.8895 19927 19927 19922 QEplus033719.raw F4 761 746 821.9 585.7 840.2 697.2 406 3.62 1 FALSE 1.14E-05 6.06E-05 0.899 -250 95419 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AASAAFQENVGR [R].aASAAFQENVGR.[Q] N-Term(TMT6plex) 1 Q8BYA0 Tubulin-specific chaperone D OS=Mus musculus OX=10090 GN=Tbcd PE=1 SV=1 Q8BYA0 Tubulin-specific chaperone D OS=Mus musculus OX=10090 GN=Tbcd PE=1 SV=1 0 2 2 0.7416 0 1 1 1 725.38275 1449.75823 1449.76476 -4.5 -0.00327 0/0 0 0 4212281 HCD 30 MS2 50.30352 570.2 110 66.892 19928 19928 19922 QEplus033719.raw F4 555.5 502.3 644.2 520.4 575 623.5 234 4.18 1 FALSE 1.14E-05 2.09E-10 1.936 -250 95428 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LHDFGYR [K].lHDFGYR.[G] N-Term(TMT6plex) 2 Q3TLX1 Nicotinamide phosphoribosyltransferase OS=Mus musculus OX=10090 GN=Nampt PE=2 SV=1 Q3TLX1; Q99KQ4 Nicotinamide phosphoribosyltransferase OS=Mus musculus OX=10090 GN=Nampt PE=2 SV=1; Nicotinamide phosphoribosyltransferase OS=Mus musculus OX=10090 GN=Nampt PE=1 SV=1 0 3 3 0.6761 0 1 1 1 379.53958 1136.60419 1136.60501 -0.72 -0.00027 0/0 0 0 3733140.25 HCD 30 MS2 60.86894 370.9 110 66.8945 19929 19929 19922 QEplus033719.raw F4 346.4 330.9 418.6 284.9 351.2 493.3 202 2.84 1 FALSE 0.001335 0.01854 0.294 -250 95443 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDDDEEMK [K].mDDDEEMk.[N] N-Term(TMT6plex); K8(TMT6plex) 5 Q4FE56 Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Usp9x PE=1 SV=1 Q91XW2; Q4FE56; P70398; Q8BS89; F8VPU6 Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Usp9y PE=2 SV=1; Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Usp9x PE=1 SV=1; Probable ubiquitin carboxyl-terminal hydrolase FAF-X OS=Mus musculus OX=10090 GN=Usp9x PE=1 SV=2; USP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Usp9x PE=2 SV=1; Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Usp9y PE=1 SV=1 0 2 2 0.7906 0 1 1 1 735.84686 1470.68645 1470.68565 0.54 0.0004 0/0 0 0 2964073.25 HCD 30 MS2 0 341.1 110 66.8995 19931 19931 19922 QEplus033719.raw F4 320.3 257.8 357.8 315.3 386.7 409 49 3.63 1 FALSE 1.14E-05 0.000211 0.795 -250 95449 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLIGHVPDQR [K].tLIGHVPDQR.[E] N-Term(TMT6plex) 8 A0A0R4J0G0 Phosphoenolpyruvate carboxykinase (GTP) OS=Mus musculus OX=10090 GN=Pck2 PE=1 SV=1 A0A0R4J0G0; A0A2I3BQL9; Q8R3X7; A0A2I3BRX1; A0A2I3BS39; Q8BH04; Q3TDE6; Q3UGF0 "Phosphoenolpyruvate carboxykinase (GTP) OS=Mus musculus OX=10090 GN=Pck2 PE=1 SV=1; Phosphoenolpyruvate carboxykinase (GTP) (Fragment) OS=Mus musculus OX=10090 GN=Pck2 PE=1 SV=1; Phosphoenolpyruvate carboxykinase (GTP) (Fragment) OS=Mus musculus OX=10090 GN=Pck2 PE=2 SV=1; Phosphoenolpyruvate carboxykinase (GTP) (Fragment) OS=Mus musculus OX=10090 GN=Pck2 PE=1 SV=1; Phosphoenolpyruvate carboxykinase (GTP) OS=Mus musculus OX=10090 GN=Pck2 PE=1 SV=1; Phosphoenolpyruvate carboxykinase [GTP], mitochondrial OS=Mus musculus OX=10090 GN=Pck2 PE=1 SV=1; Phosphoenolpyruvate carboxykinase (GTP) OS=Mus musculus OX=10090 GN=Pck2 PE=2 SV=1; Phosphoenolpyruvate carboxykinase (GTP) (Fragment) OS=Mus musculus OX=10090 GN=Pck2 PE=2 SV=1" 0 3 3 0.6355 0 1 1 1 455.59988 1364.7851 1364.78476 0.25 0.00011 0/0 0 0 22620622 HCD 30 MS2 69.80319 392.5 45.486 66.9018 19932 19932 19922 QEplus033719.raw F4 388.9 326.7 419.6 354.2 428.9 436.7 484 3.21 1 FALSE 1.14E-05 4.69E-05 0.92 -250 95456 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGEASAESTGAADGAAPEEGEAK [K].aGEASAESTGAADGAAPEEGEAk.[K] N-Term(TMT6plex); K23(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 0 3 3 0.91 0 1 1 1 845.41461 2534.22928 2534.22584 1.36 0.00115 0/0 0 0 15195184 HCD 30 MS2 0 222.4 110 66.9091 19934 19934 19933 QEplus033719.raw F4 205.4 235.6 267.9 165 232.1 228.7 187 8.67 1 FALSE 1.14E-05 6.31E-16 4.151 -250 95466 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALDEEVHK [K].aLDEEVHk.[Q] N-Term(TMT6plex); K8(TMT6plex) 3 P47856 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Mus musculus OX=10090 GN=Gfpt1 PE=1 SV=3 D3YYD9; P47856; P47856-2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Mus musculus OX=10090 GN=Gfpt1 PE=1 SV=1; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Mus musculus OX=10090 GN=Gfpt1 PE=1 SV=3; Isoform 2 of Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Mus musculus OX=10090 GN=Gfpt1 0 3 3 0.2786 0 1 1 1 466.9386 1398.80124 1398.7993 1.39 0.00065 0/0 0 0 15850289 HCD 30 MS2 42.59992 628.1 39.793 66.9139 19936 19936 19933 QEplus033719.raw F4 628 476.4 659.4 512.7 695.2 796.7 336 2.8 1 FALSE 0.0004793 0.007648 0.446 -250 95484 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VPWSHVR [R].vPWSHVR.[G] N-Term(TMT6plex) 5 Q6NSR8 Probable aminopeptidase NPEPL1 OS=Mus musculus OX=10090 GN=Npepl1 PE=1 SV=1 Q6NSR8; Q3U199; Q3TCV9; Q3UMV8; Q3UD03 Probable aminopeptidase NPEPL1 OS=Mus musculus OX=10090 GN=Npepl1 PE=1 SV=1; CYTOSOL_AP domain-containing protein OS=Mus musculus OX=10090 GN=Npepl1 PE=2 SV=1; CYTOSOL_AP domain-containing protein OS=Mus musculus OX=10090 GN=Npepl1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Npepl1 PE=2 SV=1; CYTOSOL_AP domain-containing protein OS=Mus musculus OX=10090 GN=Npepl1 PE=2 SV=1 0 3 3 0.5255 0 1 1 1 370.55191 1109.64118 1109.64173 -0.5 -0.00018 0/0 0 0 6107964.5 HCD 30 MS2 26.40985 253.8 110 66.9214 19939 19939 19933 QEplus033719.raw F4 327.5 181.5 255.6 209.3 280.2 268.7 162 3.14 1 FALSE 2.26E-05 0.001088 0.655 -250 95491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AASAAFQENVGR [R].aASAAFQENVGR.[Q] N-Term(TMT6plex) 1 Q8BYA0 Tubulin-specific chaperone D OS=Mus musculus OX=10090 GN=Tbcd PE=1 SV=1 Q8BYA0 Tubulin-specific chaperone D OS=Mus musculus OX=10090 GN=Tbcd PE=1 SV=1 0 2 2 0.6967 0 1 1 1 725.38678 1449.76628 1449.76476 1.05 0.00076 0/0 0 0 6024101.5 HCD 30 MS2 64.31338 575.6 110 66.9239 19940 19940 19933 QEplus033719.raw F4 575.4 491.4 653.7 561.4 547.2 624.2 291 3.99 1 FALSE 1.14E-05 2.98E-11 2.097 -250 95500 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEGALPTGK [K].gEGALPTGk.[S] N-Term(TMT6plex); K9(TMT6plex) 5 Q80WJ7 Protein LYRIC OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1 F6ZSG0; A0A2I3BRF4; Q80WJ7; F6QFT1; F6QHD1 Protein LYRIC (Fragment) OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1; Protein LYRIC (Fragment) OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1; Protein LYRIC OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1; Protein LYRIC (Fragment) OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=8; Protein LYRIC (Fragment) OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=2 0 2 2 0.5392 0 1 1 1 644.38812 1287.76897 1287.76727 1.32 0.00085 0/0 0 0 4143010.75 HCD 30 MS2 0 576.3 110 66.9264 19941 19941 19933 QEplus033719.raw F4 577.2 411.6 620.1 513.3 568.7 766.9 404 3.19 1 FALSE 1.14E-05 2.97E-06 1.148 -250 95513 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEFTK [R].eAEFTk.[S] N-Term(TMT6plex); K6(TMT6plex) 5 A0A140LHR3 Microsomal signal peptidase 25 kDa subunit OS=Mus musculus OX=10090 GN=Spcs2 PE=1 SV=1 A0A140LJG6; A0A140LHR3; Q9CYN2; A0A140LHG8; A0A140LJ01 Microsomal signal peptidase 25 kDa subunit OS=Mus musculus OX=10090 GN=Spcs2 PE=1 SV=1; Microsomal signal peptidase 25 kDa subunit OS=Mus musculus OX=10090 GN=Spcs2 PE=1 SV=1; Signal peptidase complex subunit 2 OS=Mus musculus OX=10090 GN=Spcs2 PE=1 SV=1; Microsomal signal peptidase 25 kDa subunit OS=Mus musculus OX=10090 GN=Spcs2 PE=1 SV=1; Microsomal signal peptidase 25 kDa subunit (Fragment) OS=Mus musculus OX=10090 GN=Spcs2 PE=1 SV=1 0 2 2 0.4439 0 1 1 1 591.84235 1182.67742 1182.67706 0.3 0.00018 0/0 0 0 11788240 HCD 30 MS2 39.65479 1697.2 110 66.9385 19945 19945 19944 QEplus033719.raw F4 1722.9 1354.5 1735.8 1621.2 1752.8 1995.7 217 2.05 1 FALSE 0.009673 0.1857 -0.122 -250 95518 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MAIQTQQSK [K].mAIQTQQSk.[F] N-Term(TMT6plex); K9(TMT6plex) 2 Q9QYA2 Mitochondrial import receptor subunit TOM40 homolog OS=Mus musculus OX=10090 GN=Tomm40 PE=1 SV=3 Q9QYA2; Q3UQD0 Mitochondrial import receptor subunit TOM40 homolog OS=Mus musculus OX=10090 GN=Tomm40 PE=1 SV=3; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tomm40 PE=2 SV=1 0 2 2 0.6032 0 1 1 1 746.93207 1492.85686 1492.85577 0.73 0.00054 0/0 0 0 12848504 HCD 30 MS2 8.643101 559.6 110 66.941 19946 19946 19944 QEplus033719.raw F4 523.5 487.6 667.3 486.7 499.6 692.9 440 3.73 1 FALSE 1.14E-05 2.06E-06 1.178 -250 95528 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAEILAR [R].aAEILAR.[D] N-Term(TMT6plex) 2 Q8VDN2 Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1 Q3TXF9; Q8VDN2 Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1 0 2 2 0.1232 0 1 1 1 486.80252 972.59776 972.60395 -6.36 -0.00309 0/0 0 0 83918232 HCD 30 MS2 8.020201 1054.1 14.865 66.9433 19947 19947 19944 QEplus033719.raw F4 1053.4 783.6 1032.7 1151 1181.5 1122.7 239 2.03 1 FALSE 0.001395 0.01997 0.281 -250 95529 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAELLAR [R].aAELLAR.[D] N-Term(TMT6plex) 1 Q9Z1W8 Potassium-transporting ATPase alpha chain 2 OS=Mus musculus OX=10090 GN=Atp12a PE=1 SV=3 0 2 2 0.1232 0 1 2 2 486.80252 972.59776 972.60395 -6.36 -0.00309 0/0 0 0 83918232 HCD 30 MS2 8.020201 1054.1 14.865 66.9433 19947 19947 19944 QEplus033719.raw F4 1053.4 783.6 1032.7 1151 1181.5 1122.7 239 2.03 1 FALSE 0.001395 0.01997 0.281 -250 95544 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQGLVPEHVETR [R].tQGLVPEHVETR.[T] N-Term(TMT6plex) 6 B9EK95 Myof protein OS=Mus musculus OX=10090 GN=Myof PE=2 SV=1 A0A286YDF5; B9EK95; Q69ZN7-4; E9Q390; A0A286YCZ3; Q69ZN7 Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=1; Myof protein OS=Mus musculus OX=10090 GN=Myof PE=2 SV=1; Isoform 4 of Myoferlin OS=Mus musculus OX=10090 GN=Myof; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=2; Myoferlin (Fragment) OS=Mus musculus OX=10090 GN=Myof PE=1 SV=1; Myoferlin OS=Mus musculus OX=10090 GN=Myof PE=1 SV=2 0 3 3 0.718 0 1 1 1 532.29755 1594.87809 1594.87504 1.91 0.00102 0/0 0 0 15903195 HCD 30 MS2 37.29089 802.1 110 66.9505 19950 19950 19944 QEplus033719.raw F4 815.7 632.4 838.6 656.5 880.3 989 424 4.22 1 FALSE 1.14E-05 3.57E-08 1.512 -250 95552 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESAVIAK [K].eSAVIAk.[D] N-Term(TMT6plex); K7(TMT6plex) 4 A0A571BEN1 "Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1" A0A571BEN1; Q6P6L5; F7D574; D3YU50 "Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1; Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1; Myosin-binding protein C, slow-type (Fragment) OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1; Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1" 0 2 2 0.3018 0 1 1 1 588.3739 1175.74053 1175.73999 0.45 0.00027 0/0 0 0 10926912 HCD 30 MS2 33.2752 1455.6 110 66.953 19951 19951 19944 QEplus033719.raw F4 1713.5 852.6 1128.1 2161.2 1229 1649 440 2.75 1 FALSE 0.0001707 0.003871 0.531 -250 95559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGSCMK [K].iGScMk.[S] N-Term(TMT6plex); C4(Carbamidomethyl); K6(TMT6plex) 7 E9QAI5 Aspartate carbamoyltransferase OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1 B2RQC6-2; E9QAI5; E9QAT6; B2RQC6; G3UWN2; Q6P9L1; Q7TN13 Isoform 2 of CAD protein OS=Mus musculus OX=10090 GN=Cad; Aspartate carbamoyltransferase OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1; CAD protein OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1; CAD protein OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1; CAD protein OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1; Cad protein (Fragment) OS=Mus musculus OX=10090 GN=Cad PE=2 SV=1; Cad protein (Fragment) OS=Mus musculus OX=10090 GN=Cad PE=2 SV=1 0 2 2 0.2179 0 1 1 1 577.32513 1153.64299 1153.64736 -3.78 -0.00218 0/0 0 0 5340791 HCD 30 MS2 16.10016 813.8 110 66.9556 19952 19952 19944 QEplus033719.raw F4 784.5 740.4 807.2 613.1 1122.7 814.9 187 1.79 1 FALSE 0.004081 0.07526 0.074 -250 95568 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPDNSMGFGAER [R].gPDNSMGFGAER.[K] N-Term(TMT6plex) 10 Q3U1S6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1 Q3UJ74; A0A0G2JF72; Q3U1S6; Q8JZN2; Q8R3R1; Q3U672; Q3U4S7; Q3TXH7; Q80TP8; Q05C63 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Csde1 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; MKIAA0885 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Csde1 protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1 0 2 2 0.7527 0 1 1 1 733.84973 1466.69219 1466.68954 1.8 0.00132 0/0 0 0 5083719.5 HCD 30 MS2 0 445.2 110 66.9581 19953 19953 19944 QEplus033719.raw F4 467.3 342.9 454.3 372.8 525.3 508.8 65 4.57 1 FALSE 1.14E-05 1.99E-11 2.13 -250 95573 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MLCQSNPSK [K].mLcQSNPSk.[N] N-Term(TMT6plex); C3(Carbamidomethyl); K9(TMT6plex) 4 O08797 SPI6 OS=Mus musculus OX=10090 GN=Serpinb9 PE=1 SV=1 Q3TJ69; O08797; Q6P217; Q9DAV6 "SERPIN domain-containing protein OS=Mus musculus OX=10090 GN=Serpinb9b PE=2 SV=1; SPI6 OS=Mus musculus OX=10090 GN=Serpinb9 PE=1 SV=1; Serine (Or cysteine) peptidase inhibitor, clade B, member 9b OS=Mus musculus OX=10090 GN=Serpinb9b PE=2 SV=1; R86 OS=Mus musculus OX=10090 GN=Serpinb9b PE=1 SV=1" 0 2 2 0.5509 0 1 1 1 761.91022 1522.81316 1522.81219 0.64 0.00048 0/0 0 0 5202586 HCD 30 MS2 30.60575 401.1 110 66.9606 19954 19954 19944 QEplus033719.raw F4 387.4 360.6 406 383.5 465.5 403.8 316 3.34 1 FALSE 1.14E-05 0.000554 0.713 -250 95583 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGEASAESTGAADGAAPEEGEAK [K].aGEASAESTGAADGAAPEEGEAk.[K] N-Term(TMT6plex); K23(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 0 4 4 0.852 0 1 1 1 634.31195 2534.22597 2534.22584 0.05 0.00003 0/0 0 0 9792557 HCD 30 MS2 4.936492 423.6 110 66.9679 19956 19956 19955 QEplus033719.raw F4 410.5 400.9 471.6 341.3 453.3 464.1 180 6.96 1 FALSE 1.14E-05 6.31E-16 3.295 -250 95589 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQTAEKEEFEHQQK [K].nQTAEkEEFEHQQk.[E] N-Term(TMT6plex); K6(TMT6plex); K14(TMT6plex) 15 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 1 3 3 0.718 0 1 1 1 811.77191 2433.30118 2433.29771 1.43 0.00116 0/0 0 0 10602759 HCD 30 MS2 5.901951 601.7 110 66.9704 19957 19957 19955 QEplus033719.raw F4 640.3 551.4 718 499.4 550.1 651.1 445 5 1 FALSE 1.14E-05 3.11E-12 2.283 -250 95604 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKEEEEDKK [R].lkEEEEDkk.[R] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex); K9(TMT6plex) 1 B2MWM9 Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 B2MWM9 Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 2 4 4 0.3188 0 1 1 1 516.81494 2064.23794 2064.23584 1.02 0.00052 0/0 0 0 25962572 HCD 30 MS2 9.773524 1158.7 62.758 66.9752 19959 19959 19955 QEplus033719.raw F4 1822.2 708.3 1180.3 1331.6 884.2 1025.6 317 2.07 1 FALSE 5.44E-05 0.001729 0.612 -250 95611 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KNKEEAAEYAK [K].kNkEEAAEYAk.[L] N-Term(TMT6plex); K1(TMT6plex); K3(TMT6plex); K11(TMT6plex) 2 Q5BLK1 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1 Q3TL53; Q5BLK1 40S ribosomal protein S6 OS=Mus musculus OX=10090 PE=2 SV=1; 40S ribosomal protein S6 OS=Mus musculus OX=10090 GN=Rps6 PE=1 SV=1 2 4 4 0.6009 0 1 1 1 550.07922 2197.29506 2197.29983 -2.17 -0.00119 0/0 0 0 9342766 HCD 30 MS2 0 887 110 66.9777 19960 19960 19955 QEplus033719.raw F4 892.9 968.7 967.8 798.6 879.1 815.2 336 4.51 1 FALSE 1.14E-05 2.21E-06 1.172 -250 95625 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNTPTTTVYR [K].vNTPTTTVYR.[C] N-Term(TMT6plex) 2 Q9D0R2 "Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2" Q3U630; Q9D0R2 "Threonyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1; Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2" 0 2 2 0.6555 0 1 1 1 690.89301 1380.77873 1380.76845 7.45 0.00514 0/0 0 0 9096324 HCD 30 MS2 43.8212 778.9 110 66.9828 19962 19962 19955 QEplus033719.raw F4 820.3 629.3 935.6 633 814 841.4 386 2.99 1 FALSE 1.14E-05 7.93E-06 1.067 -250 95642 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRLDQELK [K].sRLDQELk.[L] N-Term(TMT6plex); K8(TMT6plex) 7 Q6ZWN5 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3 F7CJS8; D3YWH9; D3YUV6; Q96EC0; D3Z673; Q6ZWN5; Q9CXW7 40S ribosomal protein S9 (Fragment) OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=1; 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=1; 40S ribosomal protein S9 (Fragment) OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=8; 40S ribosomal protein S9 (Fragment) OS=Mus musculus OX=10090 GN=Rps9 PE=2 SV=1; 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=1; 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3; 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=1 1 3 3 0.3896 0 1 1 1 482.95996 1446.86533 1446.86805 -1.88 -0.00091 0/0 0 0 5556613 HCD 30 MS2 63.08673 1246.9 110 66.9878 19964 19964 19955 QEplus033719.raw F4 1431.5 929.6 1306.8 1054.8 1408 1350.9 472 3.08 1 FALSE 0.003075 0.05992 0.114 -250 95657 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLEEQVK [R].qLEEQVk.[L] N-Term(TMT6plex); K7(TMT6plex) 2 Q8BX02 KN motif and ankyrin repeat domain-containing protein 2 OS=Mus musculus OX=10090 GN=Kank2 PE=1 SV=1 Q8BX02; Q8BX02-2 KN motif and ankyrin repeat domain-containing protein 2 OS=Mus musculus OX=10090 GN=Kank2 PE=1 SV=1; Isoform 2 of KN motif and ankyrin repeat domain-containing protein 2 OS=Mus musculus OX=10090 GN=Kank2 0 2 2 0.2376 0 1 1 1 666.40039 1331.7935 1331.79349 0.01 0.00001 0/0 0 0 8886774 HCD 30 MS2 0 519.5 110 66.9976 19967 19967 19966 QEplus033719.raw F4 523.5 437 593.3 461.8 521.4 580.3 546 3.03 1 FALSE 0.0002518 0.005088 0.499 -250 95677 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGEIYCK [K].dGEIYck.[VG] N-Term(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex) 1 P97315 Cysteine and glycine-rich protein 1 OS=Mus musculus OX=10090 GN=Csrp1 PE=1 SV=3 P97315 Cysteine and glycine-rich protein 1 OS=Mus musculus OX=10090 GN=Csrp1 PE=1 SV=3 0 2 2 0.6283 0 1 1 1 671.85632 1342.70537 1342.70771 -1.74 -0.00117 0/0 0 0 8145926.5 HCD 30 MS2 12.45115 1047.9 110 67.0048 19970 19970 19966 QEplus033719.raw F4 1210.3 884.9 1079 662.4 1520.3 930.4 188 3.04 1 FALSE 0.0004888 0.007726 0.444 -250 95678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGELYCK [K].dGELYck.[VG] N-Term(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex) 1 Q545C7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csrp3 PE=1 SV=1 Q545C7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csrp3 PE=1 SV=1 0 2 2 0.6283 0 1 2 2 671.85632 1342.70537 1342.70771 -1.74 -0.00117 0/0 0 0 8145926.5 HCD 30 MS2 12.45115 1047.9 110 67.0048 19970 19970 19966 QEplus033719.raw F4 1210.3 884.9 1079 662.4 1520.3 930.4 188 3.04 1 FALSE 0.0004888 0.007726 0.444 -250 95699 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAGEVTFADAHRPK [R].qAGEVTFADAHRPk.[L] N-Term(TMT6plex); K14(TMT6plex) 2 O35326 Serine/arginine-rich splicing factor 5 OS=Mus musculus OX=10090 GN=Srsf5 PE=1 SV=2 O35326; Q9D8S5 Serine/arginine-rich splicing factor 5 OS=Mus musculus OX=10090 GN=Srsf5 PE=1 SV=2; Serine/arginine-rich-splicing factor 5 OS=Mus musculus OX=10090 GN=Srsf5 PE=1 SV=1 0 4 4 0.6166 0 1 1 1 497.03015 1985.09878 1985.09688 0.96 0.00047 0/0 0 0 26069210 HCD 30 MS2 36.67505 671.9 54.781 67.0146 19974 19974 19966 QEplus033719.raw F4 695 619.7 737.3 529.2 736 714.4 417 3.73 1 FALSE 1.14E-05 2.55E-09 1.73 -250 95706 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMVNTKPEK [K].sMVNTkPEk.[A] N-Term(TMT6plex); K6(TMT6plex); K9(TMT6plex) 1 Q61081 Hsp90 co-chaperone Cdc37 OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1 Q61081 Hsp90 co-chaperone Cdc37 OS=Mus musculus OX=10090 GN=Cdc37 PE=1 SV=1 0 3 3 0.5441 0 1 1 1 574.3468 1721.02585 1721.02345 1.39 0.0008 0/0 0 0 15014679 HCD 30 MS2 40.72464 1436.3 75.868 67.0168 19975 19975 19966 QEplus033719.raw F4 1771 1056.8 1354.9 1151.3 1820.3 1463.4 430 2.04 1 FALSE 0.001787 0.03091 0.212 -250 95716 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSEVKPTYR [R].vSEVkPTYR.[N] N-Term(TMT6plex); K5(TMT6plex) 2 P42669 Transcriptional activator protein Pur-alpha OS=Mus musculus OX=10090 GN=Pura PE=1 SV=1 P42669; Q8C6E9 Transcriptional activator protein Pur-alpha OS=Mus musculus OX=10090 GN=Pura PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pura PE=2 SV=1 0 3 3 0.3409 0 1 1 1 512.97699 1536.91642 1536.915 0.92 0.00047 0/0 0 0 10180003 HCD 30 MS2 10.45005 1198.8 110 67.0193 19976 19976 19966 QEplus033719.raw F4 1199.2 965.6 1333.3 1167.2 1211.9 1315.9 421 2.64 1 FALSE 0.0005174 0.008128 0.437 -250 95726 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AATFEK [K].aATFEk.[Q] N-Term(TMT6plex); K6(TMT6plex) 4 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0; Q8C7E8 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.2233 0 1 1 1 562.83997 1124.67266 1124.67158 0.95 0.00054 0/0 0 0 14123300 HCD 30 MS2 33.64181 1447.5 110 67.0266 19978 19978 19977 QEplus033719.raw F4 1466.9 1259.9 1514.4 1091.9 1868.4 1483.5 179 2.06 1 FALSE 0.005276 0.09038 0.033 -250 95736 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LYQECEK [R].lYQEcEk.[L] N-Term(TMT6plex); C5(Carbamidomethyl); K7(TMT6plex) 3 P48722 Heat shock 70 kDa protein 4L OS=Mus musculus OX=10090 GN=Hspa4l PE=1 SV=2 P48722; P48722-2; E0CY23 Heat shock 70 kDa protein 4L OS=Mus musculus OX=10090 GN=Hspa4l PE=1 SV=2; Isoform 2 of Heat shock 70 kDa protein 4L OS=Mus musculus OX=10090 GN=Hspa4l; Heat shock 70 kDa protein 4L (Fragment) OS=Mus musculus OX=10090 GN=Hspa4l PE=1 SV=1 0 2 2 0.4034 0 1 1 1 714.38336 1427.75945 1427.76047 -0.72 -0.00051 0/0 0 0 4008798.5 HCD 30 MS2 0 479.8 110 67.0291 19979 19979 19977 QEplus033719.raw F4 477 434.7 517.3 454.8 492 502.8 265 2.9 1 FALSE 0.0005076 0.007831 0.442 -250 95743 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIGGDVQK [K].eIGGDVQk.[H] N-Term(TMT6plex); K8(TMT6plex) 5 Q3U0U5 Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1 Q3UNQ0; Q3TC53; B1ARS0; P40124; Q3U0U5 Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Cap1 PE=1 SV=1; Adenylyl cyclase-associated protein 1 OS=Mus musculus OX=10090 GN=Cap1 PE=1 SV=4; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1 0 3 3 0.4087 0 1 1 1 435.25906 1303.76264 1303.76219 0.35 0.00015 0/0 0 0 36538376 HCD 30 MS2 28.16376 583 36.594 67.0314 19980 19980 19977 QEplus033719.raw F4 586.9 580.7 603.2 407.8 761.5 557.9 517 2.3 1 FALSE 0.001327 0.01823 0.297 -250 95746 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGAGAVVPK [K].aGAGAVVPk.[L] N-Term(TMT6plex); K9(TMT6plex) 1 Q9DC70 "NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs7 PE=1 SV=1" Q9DC70 "NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs7 PE=1 SV=1" 0 2 2 0.6288 0 1 1 1 614.39484 1227.7824 1227.78253 -0.11 -0.00007 0/0 0 0 33281096 HCD 30 MS2 28.11376 1225.3 65.053 67.0337 19981 19981 19977 QEplus033719.raw F4 1255.4 882.6 1341 1226.2 1140.8 1505.5 175 2.99 1 FALSE 1.14E-05 2.29E-05 0.979 -250 95763 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVFGQAVK [R].hVFGQAVk.[N] N-Term(TMT6plex); K8(TMT6plex) 7 Q3TF74 Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1 Q3TF74; E9PZJ0; Q5PPQ7; Q3TEU8; E9PVJ1; Q9WUM4; E9PX03 Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin-1C (Fragment) OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=1; Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin-1C (Fragment) OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=1; Coronin-1C OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=2; Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=1 0 3 3 0.6061 0 1 1 1 448.61176 1343.82071 1343.81998 0.55 0.00025 0/0 0 0 30242812 HCD 30 MS2 41.73051 490 29.507 67.0382 19983 19983 19977 QEplus033719.raw F4 504.6 429.3 568.5 335.8 624.7 477.2 302 3.91 1 FALSE 1.14E-05 3.30E-07 1.329 -250 95768 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MLYAATR [K].mLYAATR.[A] N-Term(TMT6plex) 5 Q9Z0P5; Q91YR1 Twinfilin-2 OS=Mus musculus OX=10090 GN=Twf2 PE=1 SV=1;Twinfilin-1 OS=Mus musculus OX=10090 GN=Twf1 PE=1 SV=2 Q9Z0P5; D3Z2H0; Q91YR1; Q9Z0P5-2; A0A1L1STC8 Twinfilin-2 OS=Mus musculus OX=10090 GN=Twf2 PE=1 SV=1; Twinfilin-1 (Fragment) OS=Mus musculus OX=10090 GN=Twf1 PE=1 SV=1; Twinfilin-1 OS=Mus musculus OX=10090 GN=Twf1 PE=1 SV=2; Isoform 2 of Twinfilin-2 OS=Mus musculus OX=10090 GN=Twf2; Twinfilin-2 (Fragment) OS=Mus musculus OX=10090 GN=Twf2 PE=1 SV=1 0 2 2 0.5263 0 1 1 1 527.79999 1054.5927 1054.59167 0.98 0.00052 0/0 0 0 19607080 HCD 30 MS2 44.30896 1466 110 67.0407 19984 19984 19977 QEplus033719.raw F4 1411.2 1311.5 1613.4 1315.9 1608.1 1536.2 191 2.47 2 FALSE 0.0002719 0.005442 0.491 -250 95776 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNGDASPAAAEPGAK [K].vNGDASPAAAEPGAk.[E] N-Term(TMT6plex); K15(TMT6plex) 3 P26645 Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2 A0A0A1HAM8; P26645; Q05BL6 80K protein OS=Mus musculus OX=10090 GN=Marcks PE=2 SV=1; Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2; Marcks protein (Fragment) OS=Mus musculus OX=10090 GN=Marcks PE=2 SV=1 0 3 3 0.6759 0 1 1 1 605.00018 1812.986 1812.9856 0.22 0.00013 0/0 0 0 14657140 HCD 30 MS2 35.0459 1022.1 110 67.0432 19985 19985 19977 QEplus033719.raw F4 1080.1 833.2 1055.7 813.9 1338.8 1010.9 376 3.95 1 FALSE 1.14E-05 8.36E-10 1.822 -250 95793 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQGVMVGMGQK [R-].hQGVMVGMGQk.[D] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3UCF8; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 3 3 0.7521 0 1 1 1 543.97247 1629.90287 1629.89692 3.65 0.00198 0/0 0 0 3087146752 HCD 30 MS2 4.220371 494.4 0.622 67.0555 19989 19989 19988 QEplus033719.raw F4 522.4 369.9 563.6 395.1 525.2 589.9 374 4.84 4 FALSE 1.14E-05 2.43E-10 1.924 -250 95814 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DALFQR [R].dALFQR.[Y] N-Term(TMT6plex) 3 A1A4T2 Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1 Q8BHN3-3; A1A4T2; Q8BHN3 Isoform 3 of Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab; Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab PE=1 SV=1 0 2 2 0.2243 0 1 1 1 489.78317 978.55907 978.557 2.12 0.00104 0/0 0 0 37866060 HCD 30 MS2 43.06329 950.5 26.495 67.0623 19992 19992 19988 QEplus033719.raw F4 1062.9 693.8 999.3 872.8 1020.2 1053.8 212 2.14 1 FALSE 0.004939 0.08622 0.045 -250 95823 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNTPTTTVYR [K].vNTPTTTVYR.[C] N-Term(TMT6plex) 2 Q9D0R2 "Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2" Q3U630; Q9D0R2 "Threonyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1; Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2" 0 2 2 0.7264 0 1 1 1 690.8894 1380.77153 1380.76845 2.24 0.00154 0/0 0 0 37550376 HCD 30 MS2 4.104031 674.8 60.47 67.0646 19993 19993 19988 QEplus033719.raw F4 717.3 577.4 764.2 584.6 689.9 715.4 376 3.29 1 FALSE 1.14E-05 2.34E-05 0.977 -250 95833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVQQLQGK [K].eVQQLQGk.[I] N-Term(TMT6plex); K8(TMT6plex) 3 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1 0 2 2 0.5718 0 1 1 1 694.41931 1387.83135 1387.83094 0.3 0.00021 0/0 0 0 30442272 HCD 30 MS2 19.0266 1038.5 77.639 67.0669 19994 19994 19988 QEplus033719.raw F4 1012.6 1005.6 1099 759.3 1389.6 965 513 3.69 1 FALSE 1.14E-05 0.0001473 0.825 -250 95849 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIRPGLSPYR [R].sIRPGLSPYR.[A] N-Term(TMT6plex) 3 A1A4T2 Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1 A1A4T2; Q3UE86; Q8BHN3 Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Gal_mutarotas_2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab PE=1 SV=1 0 3 3 0.592 0 1 1 1 458.94034 1374.80646 1374.8055 0.7 0.00032 0/0 0 0 22371920 HCD 30 MS2 11.78658 503.4 50.533 67.0714 19996 19996 19988 QEplus033719.raw F4 528.8 412.9 566.5 457.6 545.9 508.4 482 3.75 1 FALSE 1.14E-05 3.83E-06 1.127 -250 95858 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDACFIR [R].tDAcFIR.[V] N-Term(TMT6plex); C4(Carbamidomethyl) 3 Q8BVQ9 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=1 SV=1 Q3UIH5; Q8BVQ9; P46471 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=2 SV=1; 26S proteasome AAA-ATPase subunit RPT1 OS=Mus musculus OX=10090 GN=Psmc2 PE=1 SV=1; 26S proteasome regulatory subunit 7 OS=Mus musculus OX=10090 GN=Psmc2 PE=1 SV=5 0 2 2 0.4265 0 1 1 1 556.29169 1111.5761 1111.57675 -0.58 -0.00032 0/0 0 0 20587056 HCD 30 MS2 58.74263 1140.8 41.944 67.0737 19997 19997 19988 QEplus033719.raw F4 1275.2 797.9 1157.3 1105.8 1126.6 1382 140 2.11 1 FALSE 0.002173 0.0413 0.17 -250 95865 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDECGLALGR [R].gDEcGLALGR.[L] N-Term(TMT6plex); C4(Carbamidomethyl) 6 Q3TWN8 Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1 Q3TWN8; Q3UZ27; Q9Z110; Q9Z110-2; D3Z0B4; Q3UGW8 Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1; Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=1 SV=2; Isoform Short of Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1; Delta-1-pyrroline-5-carboxylate synthase (Fragment) OS=Mus musculus OX=10090 GN=Aldh18a1 PE=1 SV=2; Gamma-glutamyl kinase (Fragment) OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1 0 2 2 0.5427 0 1 1 1 638.83038 1276.65349 1276.6517 1.4 0.00089 0/0 0 0 19770428 HCD 30 MS2 27.39293 1089.2 110 67.0762 19998 19998 19988 QEplus033719.raw F4 1123.7 1067.4 1176.9 816 1246.6 1104.5 179 2.93 1 FALSE 1.14E-05 6.72E-07 1.27 -250 95896 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVQQLQGK [K].eVQQLQGk.[I] N-Term(TMT6plex); K8(TMT6plex) 3 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1 0 3 3 0.5589 0 1 1 1 463.2821 1387.83176 1387.83094 0.59 0.00028 0/0 0 0 24052446 HCD 30 MS2 22.55903 640.9 56.793 67.0948 20005 20005 19999 QEplus033719.raw F4 647.6 552.6 679.7 491.4 822 652.4 509 3.31 1 FALSE 5.44E-05 0.002433 0.579 -250 95903 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WGTDEDK [K].wGTDEDk.[F] N-Term(TMT6plex); K7(TMT6plex) 5 O35639 Annexin A3 OS=Mus musculus OX=10090 GN=Anxa3 PE=1 SV=4 O35639; Q8C1X9; Q3TLP4; Q3TFK4; Q3U737 Annexin A3 OS=Mus musculus OX=10090 GN=Anxa3 PE=1 SV=4; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1 0 2 2 0.6154 0 1 1 1 654.84564 1308.68401 1308.6836 0.31 0.0002 0/0 0 0 19724160 HCD 30 MS2 16.78584 1305.6 110 67.0973 20006 20006 19999 QEplus033719.raw F4 1449.5 1011 1347 900.4 1775.9 1349.6 226 2.73 1 FALSE 0.001028 0.01349 0.352 -250 95924 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVNQQEFVR [K].dVNQQEFVR.[A] N-Term(TMT6plex) 7 Q5M9P3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1 D3YUT3; D3Z722; S4R223; D3Z5R8; Q5M9P3; Q9CZX8; D3YUG3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=2; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=1; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=1; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=8; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=3; 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=8 0 2 2 0.6421 0 1 1 1 682.36249 1363.7177 1363.71674 0.7 0.00048 0/0 0 0 29965936 HCD 30 MS2 4.644241 559.9 60.32 67.1119 20011 20011 20010 QEplus033719.raw F4 560.1 459.6 623.9 459 627.2 629.8 265 3.66 1 FALSE 1.14E-05 2.82E-06 1.152 -250 95933 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVADYK [K].dVADYk.[S] N-Term(TMT6plex); K6(TMT6plex) 1 Q544R9 High mobility group box 3 OS=Mus musculus OX=10090 GN=Hmgb3 PE=1 SV=1 Q544R9 High mobility group box 3 OS=Mus musculus OX=10090 GN=Hmgb3 PE=1 SV=1 0 2 2 0.0866 0 1 1 1 584.83466 1168.66203 1168.66141 0.53 0.00031 0/0 0 0 26441180 HCD 30 MS2 31.3046 1590.4 110 67.1144 20012 20012 20010 QEplus033719.raw F4 1481.4 1746.8 1611.2 978.9 2333.5 1390.6 203 2.31 1 FALSE 0.003235 0.06325 0.105 -250 95942 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAIEGVK [K].sAIEGVk.[Y] N-Term(TMT6plex); K7(TMT6plex) 2 Q05A24 "Cholinergic receptor, nicotinic, alpha polypeptide 1 (Muscle) OS=Mus musculus OX=10090 GN=Chrna1 PE=2 SV=1" Q05A24; Q3V1A2 "Cholinergic receptor, nicotinic, alpha polypeptide 1 (Muscle) OS=Mus musculus OX=10090 GN=Chrna1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Chrna1 PE=2 SV=1" 0 2 2 0.2435 0 1 1 1 581.36609 1161.7249 1161.72434 0.48 0.00028 0/0 0 0 20142184 HCD 30 MS2 22.75607 1258.7 110 67.1192 20014 20014 20010 QEplus033719.raw F4 1248.8 846.1 1366.8 1352.1 1077.8 1660.4 517 2.3 1 FALSE 0.0003113 0.006154 0.475 -250 95960 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AATQCEFSK [RK].aATQcEFSk.[QK] N-Term(TMT6plex); C5(Carbamidomethyl); K9(TMT6plex) 16 Q3TMV8 DCN1-like protein OS=Mus musculus OX=10090 PE=2 SV=1 Q3TMV8; A0A0G2JDM0; Q9QZ73; Q3UT23; A0A0G2JDN9; A0A140T8R8; A0A0G2JGV7; Q8BZJ7; Q3TSY8; A0A1B0GXL7; G5E8Q6; Q8BZJ7-2; Q8BZJ7-4; G5E8Q5; Q99NE7; A0A0N4SW97 DCN1-like protein OS=Mus musculus OX=10090 PE=2 SV=1; DCN1-like protein (Fragment) OS=Mus musculus OX=10090 GN=Dcun1d1 PE=1 SV=1; DCN1-like protein 1 OS=Mus musculus OX=10090 GN=Dcun1d1 PE=2 SV=1; DCN1-like protein OS=Mus musculus OX=10090 GN=Dcun1d1 PE=1 SV=1; DCN1-like protein (Fragment) OS=Mus musculus OX=10090 GN=Dcun1d1 PE=1 SV=4; DCN1-like protein (Fragment) OS=Mus musculus OX=10090 GN=Dcun1d1 PE=1 SV=1; DCN1-like protein (Fragment) OS=Mus musculus OX=10090 GN=Dcun1d1 PE=1 SV=1; DCN1-like protein 2 OS=Mus musculus OX=10090 GN=Dcun1d2 PE=1 SV=3; DCN1-like protein OS=Mus musculus OX=10090 GN=Dcun1d2 PE=2 SV=1; DCN1-like protein (Fragment) OS=Mus musculus OX=10090 GN=Dcun1d1 PE=1 SV=1; DCN1-like protein 2 OS=Mus musculus OX=10090 GN=Dcun1d2 PE=1 SV=1; Isoform 2 of DCN1-like protein 2 OS=Mus musculus OX=10090 GN=Dcun1d2; Isoform 3 of DCN1-like protein 2 OS=Mus musculus OX=10090 GN=Dcun1d2; DCN1-like protein 2 OS=Mus musculus OX=10090 GN=Dcun1d2 PE=1 SV=1; DCN1-like protein OS=Mus musculus domesticus OX=10092 GN=Tes3 PE=2 SV=1; DCN1-like protein 2 OS=Mus musculus OX=10090 GN=Dcun1d2 PE=1 SV=1 0 2 2 0.7198 0 1 1 1 750.40216 1499.79704 1499.79284 2.81 0.0021 0/0 0 0 4325154 HCD 30 MS2 0 443.7 110 67.1287 20018 20018 20010 QEplus033719.raw F4 462.9 351 461.1 385.2 495.2 506.8 231 4.14 1 FALSE 1.14E-05 1.33E-06 1.214 -250 95966 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKKDDTDDEIAK [K].akkDDTDDEIAk.[Y] N-Term(TMT6plex); K2(TMT6plex); K3(TMT6plex); K12(TMT6plex) 2 Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 Q3TXE5; Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 2 3 3 0.6061 0 1 1 1 755.77502 2265.31052 2265.31079 -0.12 -0.00009 0/0 0 0 2901122.25 HCD 30 MS2 0 190.5 110 67.1312 20019 20019 20010 QEplus033719.raw F4 161.2 140.1 213 193.7 209.8 225.4 420 2.97 1 FALSE 1.14E-05 1.02E-06 1.236 -250 95981 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQGVMVGMGQK [R-].hQGVMVGMGQk.[D] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3UCF8; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 2 2 0.7812 0 1 1 1 815.45264 1629.898 1629.89692 0.66 0.00054 0/0 0 0 230859408 HCD 30 MS2 4.2894 864.5 11.541 67.1411 20022 20022 20021 QEplus033719.raw F4 910.3 643 976 691.7 922.3 1043.7 384 4.25 4 FALSE 1.14E-05 2.31E-09 1.738 -250 95994 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LNSGDYK [K].lNSGDYk.[T] N-Term(TMT6plex); K7(TMT6plex) 5 Q78PY7 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 Q78PY7; Q3UZI3; Q3TW51; Q3TRW3; Q3TJ56 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 0 2 2 0.4664 0 1 1 1 627.8584 1254.70952 1254.70942 0.08 0.00005 0/0 0 0 61493936 HCD 30 MS2 4.93997 1262.7 36.941 67.1456 20024 20024 20021 QEplus033719.raw F4 1174.1 1156.1 1430.5 1058.5 1411.7 1345.2 350 2.53 1 FALSE 0.001108 0.01447 0.339 -250 96009 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTHPLFK [R-].kTHPLFk.[I] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 174 V9PC53 Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=Cytb PE=3 SV=1 V9PC53; V9TP20; A0A1E1F976; A0A1E1F982; A0A1E1F981; A0A1B1SN86; U3TJD4; V9TRK2; A0A1B1SNI9; A0A1B1SND9; A0A1B1SN75; Q71EJ0; A0A1B1SND2; Q71EK1; U6C7D9; A0A1S6PXL7; A0A1S6PXN0; A0A1B1SNB4; V9PC60; A0A1B1SNH5; U3TJ90; A0A1B1SNB1; U3TLH9; A0A1B1SND0; V9PC36; V9PCE4; A0A678TRK1; A0A455RDV4; L0L1W8; V9TQ89; A0A1B1SNI2; Q401X2; A0A1B1SNJ8; A0A1B1SNA4; U3TEU0; U3TJ86; A3R3Q8; A0A1E1F983; V9PC80; Q9TEY3; Q401U1; U3TI41; U6C8B6; A0A1B1SNI1; G3EBA2; V9TN76; V9PC39; V9PCA7; V9PBX6; R9TNV1; V9PCA9; A0A1B1SN51; Q6VPW4; A0A455R782; U3TL23; U6C7E5; A0A1B1SNF8; A0A0F6PYR5; A0A067XLA2; A0A140GE27; U3TI47; A0A023J6C8; A0A1B1SNE3; U3TI74; A0A1B1SND8; V9PCE1; A0A1S6PXL6; U3TL36; U3TL17; A0A1B1SNA2; Q5WA17; A0A1B1SNH8; A0A1E1F993; A0A1B1SNI8; A0A023J5Y8; A0A1B1SN97; A0A1S6PXL0; A8DUS7; U3TJ57; A0A075DCW5; A0A1B1SNC5; Q8WA48; V9PCF4; A0A1B1SND1; U3THZ3; A0A1B1SNC3; U3TLJ1; Q401X6; V9PC70; A0A1B1SNE6; A0A1S6PXN5; A0A1B1SNB3; A0A023J5X5; A0A1B1SNJ0; A0A023J650; A0A1B1SNH9; A0A1B1SN54; A0A1S6PXN4; V9PBY3; V9PC65; U3TJ78; A0A1B1SNI4; A0A1B1SNG5; Q71EJ4; U3TI68; V9PC99; Q71EJ7; A0A1E1F9C3; A0A1E1F990; A0A1B1SNF1; Q3V2F9; A0A1B1SNH6; A0A1E1F984; A0A1B1SNF9; Q3V2T7; Q401W3; A0A455R6F4; A0A023J6J2; A0A1B1SNF6; U3TLF6; V9PC96; A0A286KA21; A0A1B1SNB9; A0A1B1SNF0; V9PC31; U3TJA4; A0A2Z6IA25; U3TEV9; U3TI24; Q9TDS6; Q7HCG8; P00158; A0A1B1SNB0; A0A0F6PXN8; V9PC38; L0L4K0; A0A1S6PXL1; U3TJH2; W0SLU4; A0A1E1F987; B3Y998; V9PCF0; A0A1B1SNC6; A0A1B1SNE9; A0A1E1F999; A0A1B1SNB5; U6C6V9; A0A1B1SNA5; U3TEZ2; A0A4P2VRD2; V9PBY0; A0A1B1SNH7; V9PBZ1; Q5WA16; A0A023J601; A0A1B1SN68; A0A650FQN5; A0A1B1SNE5; A0A1B1SNF7; A8DUR3; V9PC97; V9TP30; A0A1B1SNC0; L0L4R1; U3TJ94; A0A1B1SNH0; A0A1B1SNH1; U3TI17; V9PBY4; A0A1B1SNC1; A0A1B1SNC4; A0A678TJ39; A0A1S6PXL4; U3TJC6 Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus isatissus OX=1879032 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Cytochrome b OS=Mus musculus castaneus OX=10091 PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus isatissus OX=1879032 GN=cytb PE=3 SV=1; Cytochrome b OS=Mus musculus OX=10090 PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus isatissus OX=1879032 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus molossinus OX=57486 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus castaneus OX=10091 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b OS=Mus musculus OX=10090 GN=CYTB PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=Cytb PE=3 SV=1; Cytochrome b OS=Mus musculus domesticus OX=10092 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus molossinus OX=57486 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus castaneus OX=10091 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b OS=Mus musculus OX=10090 GN=CYTB PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=CYTB PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Complex III subunit 3 (Fragment) OS=Mus musculus domesticus OX=10092 GN=cytb PE=4 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=cytb PE=3 SV=1; Cytochrome b OS=Mus musculus helgolandicus OX=1643390 GN=CYTB PE=3 SV=1; Cytochrome b OS=Mus musculus musculus OX=39442 GN=CYTB PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b OS=Mus musculus castaneus OX=10091 GN=CYTB PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus isatissus OX=1879032 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus isatissus OX=1879032 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus castaneus OX=10091 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b OS=Mus musculus musculus OX=39442 GN=CYTB PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus castaneus OX=10091 GN=cytb PE=3 SV=1; Cytochrome b OS=Mus musculus OX=10090 GN=CYTB PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Cytochrome b OS=Mus musculus molossinus OX=57486 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus castaneus OX=10091 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus isatissus OX=1879032 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus isatissus OX=1879032 GN=cytb PE=3 SV=1; Cytochrome b OS=Mus musculus musculus OX=39442 GN=CYTB PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b OS=Mus musculus musculus OX=39442 GN=CYTB PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=cytb PE=3 SV=1; Cytochrome b OS=Mus musculus musculus OX=39442 GN=CYTB PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=Cytb PE=3 SV=1; Cytochrome b OS=Mus musculus OX=10090 PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=mt-Cytb PE=2 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=cytb PE=3 SV=1; Complex III subunit 3 (Fragment) OS=Mus musculus OX=10090 GN=mt-Cytb PE=2 SV=1; Cytochrome b (Fragment) OS=Mus musculus molossinus OX=57486 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=3 SV=1; Cytochrome b OS=Mus musculus musculus OX=39442 GN=CYTB PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus isatissus OX=1879032 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus isatissus OX=1879032 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus homourus OX=179238 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus castaneus OX=10091 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=3 SV=1; Cytochrome b OS=Mus musculus musculus OX=39442 GN=Cytb PE=3 SV=1; Cytochrome b OS=Mus musculus OX=10090 GN=Mt-Cyb PE=1 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Cytochrome b OS=Mus musculus helgolandicus OX=1643390 GN=CYTB PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Complex III subunit 3 (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=4 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus isatissus OX=1879032 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Complex III subunit 3 (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=4 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus castaneus OX=10091 GN=cytb PE=3 SV=1; Cytochrome b OS=Mus musculus castaneus OX=10091 GN=CYTB PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Complex III subunit 3 (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=4 SV=1; Cytochrome b (Fragment) OS=Mus musculus isatissus OX=1879032 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus domesticus OX=10092 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus castaneus OX=10091 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus bactrianus OX=35531 GN=cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus OX=10090 GN=Cytb PE=3 SV=1; Cytochrome b (Fragment) OS=Mus musculus musculus OX=39442 GN=cytb PE=3 SV=1 1 4 4 0.5441 0 1 1 1 390.25696 1558.006 1558.0084 -1.54 -0.0006 0/0 0 0 9628277 HCD 30 MS2 9.921944 553.2 110 67.1528 20027 20027 20021 QEplus033719.raw F4 528.9 472.9 601.2 610.9 436.7 668.5 187 3.29 1 FALSE 0.00484 0.08484 0.048 -250 96018 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADDADEFGYSR [R].aDDADEFGYSR.[-] N-Term(TMT6plex) 4 Q78PY7 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 Q78PY7; Q3UZI3; Q3TW51; Q3TRW3 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1 0 2 2 0.8652 0 1 1 1 737.83667 1474.66606 1474.66477 0.88 0.00065 0/0 0 0 9078457 HCD 30 MS2 7.73843 577 110 67.1553 20028 20028 20021 QEplus033719.raw F4 532.4 530.4 637.6 533.5 577.1 650.7 23 4.6 1 FALSE 1.14E-05 1.41E-08 1.589 -250 96023 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIPGPAGAAGATGAR [R].gIPGPAGAAGATGAR.[G] N-Term(TMT6plex) 3 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.5869 0 1 1 1 726.91101 1452.81474 1452.81204 1.86 0.00135 0/0 0 0 8837686 HCD 30 MS2 0 355.5 110 67.1578 20029 20029 20021 QEplus033719.raw F4 324.6 363.3 426.2 165 487.4 366.5 408 3.97 1 FALSE 1.14E-05 5.54E-13 2.426 -250 96032 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELVDGK [R].eLVDGk.[L] N-Term(TMT6plex); K6(TMT6plex) 1 P11404 "Fatty acid-binding protein, heart OS=Mus musculus OX=10090 GN=Fabp3 PE=1 SV=5" P11404 "Fatty acid-binding protein, heart OS=Mus musculus OX=10090 GN=Fabp3 PE=1 SV=5" 0 2 2 0.2581 0 1 1 1 559.84424 1118.6812 1118.68215 -0.85 -0.00047 0/0 0 0 8846325 HCD 30 MS2 56.68089 1111.9 110 67.1603 20030 20030 20021 QEplus033719.raw F4 1217.7 514 906.4 1758.5 750.6 1524.1 266 2.17 1 FALSE 0.002326 0.04628 0.153 -250 96038 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRLDQELK [K].sRLDQELk.[L] N-Term(TMT6plex); K8(TMT6plex) 7 Q6ZWN5 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3 F7CJS8; D3YWH9; D3YUV6; Q96EC0; D3Z673; Q6ZWN5; Q9CXW7 40S ribosomal protein S9 (Fragment) OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=1; 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=1; 40S ribosomal protein S9 (Fragment) OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=8; 40S ribosomal protein S9 (Fragment) OS=Mus musculus OX=10090 GN=Rps9 PE=2 SV=1; 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=1; 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3; 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=1 1 2 2 0.3251 0 1 1 1 723.93811 1446.86894 1446.86805 0.62 0.00045 0/0 0 0 8040341.5 HCD 30 MS2 0 460.7 110 67.1628 20031 20031 20021 QEplus033719.raw F4 474.4 398.2 522.7 386.2 476.1 506.7 456 2.83 1 FALSE 5.44E-05 0.002465 0.578 -250 96046 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YLCDEQK [K].yLcDEQk.[E] N-Term(TMT6plex); C3(Carbamidomethyl); K7(TMT6plex) 9 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 Q8R2V4; Q6NZJ6-2; E9Q9E1; Q6PD42; E9PVC5; E9PVC6; A0A0J9YUS5; Q6NZJ6; Q8K0J8 Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 0 2 2 0.5327 0 1 1 1 707.37628 1413.74529 1413.74482 0.33 0.00023 0/0 0 0 11331452 HCD 30 MS2 31.60741 876.8 110 67.1702 20033 20033 20032 QEplus033719.raw F4 866.8 711.3 1001.6 819.8 957.5 903.6 210 3.06 1 FALSE 0.000262 0.005281 0.495 -250 96050 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LECVEPNCR [R].lEcVEPNcR.[S] N-Term(TMT6plex); C3(Carbamidomethyl); C8(Carbamidomethyl) 2 Q5M9P1 Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1 A0A2I3BPG9; Q5M9P1 "Ribosomal protein L36A, pseudogene 1 OS=Mus musculus OX=10090 GN=Rpl36a-ps1 PE=3 SV=1; Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1" 0 2 2 0.5725 0 1 1 1 703.3421 1405.67693 1405.67654 0.28 0.0002 0/0 0 0 9036132 HCD 30 MS2 0 446.1 110 67.1727 20034 20034 20032 QEplus033719.raw F4 470.2 401.3 477.9 387 463.5 476.9 69 2.76 1 FALSE 3.35E-05 0.001402 0.632 -250 96074 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LELCDNR [R].lELcDNR.[V] N-Term(TMT6plex); C4(Carbamidomethyl) 1 P99028 "Cytochrome b-c1 complex subunit 6, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrh PE=1 SV=2" P99028 "Cytochrome b-c1 complex subunit 6, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrh PE=1 SV=2" 0 2 2 0.5333 0 1 1 1 574.79956 1148.59184 1148.59312 -1.11 -0.00064 0/0 0 0 33387602 HCD 30 MS2 72.17889 1220.7 25.091 67.1795 20037 20037 20032 QEplus033719.raw F4 1375.1 889.3 1178.2 1079.1 1513 1289.8 189 1.95 1 FALSE 0.005667 0.09532 0.019 -250 96078 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIDQIHK [K].tIDQIHk.[E] N-Term(TMT6plex); K7(TMT6plex) 8 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 Q6NZJ6-2; E9Q9E1; Q6PD42; E9PVC5; E9PVC6; A0A0J9YUS5; Q6NZJ6; Q8K0J8 Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 0 3 3 0.3413 0 1 1 1 438.27161 1312.80027 1312.79891 1.04 0.00045 0/0 0 0 32292954 HCD 30 MS2 27.11892 751.8 45.085 67.1817 20038 20038 20032 QEplus033719.raw F4 792.4 597.1 771.3 579.2 932.3 838.7 287 3.34 1 FALSE 0.0001401 0.003233 0.55 -250 96083 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDDPSCPRPECYR [K].lDDPScPRPEcYR.[S] N-Term(TMT6plex); C6(Carbamidomethyl); C11(Carbamidomethyl) 4 Q3UIJ2 Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1 A2AAW9; Q3UIJ2; Q3UDF8; Q3TML6 "Eukaryotic translation initiation factor 2 subunit 3, X-linked OS=Mus musculus OX=10090 GN=Eif2s3x PE=1 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=1 SV=1" 0 3 3 0.5592 0 1 1 1 631.96466 1893.87943 1893.87848 0.5 0.00032 0/0 0 0 23595336 HCD 30 MS2 18.03964 810.1 110 67.1843 20039 20039 20032 QEplus033719.raw F4 804.3 707 835.7 665.1 993.5 854.9 53 3.04 1 FALSE 1.14E-05 7.23E-05 0.884 -250 96089 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EWADGK [R].eWADGk.[S] N-Term(TMT6plex); K6(TMT6plex) 3 E9PWE8 Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 E9PWE8; Q62188; Q3TT92 Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 0 2 2 0.4389 0 1 1 1 582.32709 1163.6469 1163.64609 0.69 0.0004 0/0 0 0 19902244 HCD 30 MS2 29.97385 1592.2 95.055 67.1865 20040 20040 20032 QEplus033719.raw F4 1613.8 1194.6 1533.2 1401.8 2110.7 1699.2 275 2.21 1 FALSE 0.003793 0.07158 0.084 -250 96095 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPMNAADGAAAGEK [K].qPMNAADGAAAGEk.[N] N-Term(TMT6plex); K14(TMT6plex) 6 Q3TN39 Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1 Q3TN39; A0A0U1RPG5; P10852; A0A0U1RP32; P10852-2; A0A0U1RP98 Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; 4F2 cell-surface antigen heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; 4F2 cell-surface antigen heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; Isoform 2 of 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2; 4F2 cell-surface antigen heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1 0 3 3 0.6584 0 1 1 1 596.98206 1788.93161 1788.93145 0.09 0.00005 0/0 0 0 9525288 HCD 30 MS2 20.13891 739.8 110 67.189 20041 20041 20032 QEplus033719.raw F4 768.9 537.5 796.3 614.1 876.4 845.6 327 5.62 1 FALSE 1.14E-05 1.01E-12 2.376 -250 96104 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YAHVVLRK [R].yAHVVLRk.[A] N-Term(TMT6plex); K8(TMT6plex) 5 Q561N5 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1 S4R1N6; Q561N5; Q3TW65; F6YVP7; A0A1Y7VKY1 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=3 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps6 PE=3 SV=2; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps5 PE=3 SV=1 1 4 4 0.4303 0 1 1 1 361.73547 1443.92006 1443.92002 0.03 0.00001 0/0 0 0 3450971.5 HCD 30 MS2 25.91135 346.4 110 67.1915 20042 20042 20032 QEplus033719.raw F4 368.6 232.6 415.8 281.9 342.5 437.2 220 3.37 1 FALSE 5.44E-05 0.001819 0.607 -250 96113 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQGVMVGMGQK [R-].hQGVMVGMGQk.[D] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3UCF8; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 4 4 0.7264 0 1 1 1 408.23019 1629.89895 1629.89692 1.24 0.00051 0/0 0 0 258875744 HCD 30 MS2 6.439205 407.2 7.18 67.1988 20044 20044 20043 QEplus033719.raw F4 424.2 336.5 460.2 315.5 436.4 470.1 394 4.24 4 FALSE 1.14E-05 1.84E-05 0.997 -250 96129 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEPGATGVQGPPGPAGEEGKR [K].gEPGATGVQGPPGPAGEEGkR.[G] N-Term(TMT6plex); K20(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 1 3 3 0.8136 0 1 1 1 802.76514 2406.28086 2406.27776 1.29 0.00103 0/0 0 0 17213532 HCD 30 MS2 7.439125 411.8 110 67.2039 20046 20046 20043 QEplus033719.raw F4 351.2 503 567.6 240.7 425.5 382.6 434 7.35 1 FALSE 1.14E-05 6.31E-16 4.634 -250 96163 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGPQGAPGK [R].lGPQGAPGk.[R] N-Term(TMT6plex); K9(TMT6plex) 1 Q3U962 Collagen alpha-2(V) chain OS=Mus musculus OX=10090 GN=Col5a2 PE=1 SV=1 Q3U962 Collagen alpha-2(V) chain OS=Mus musculus OX=10090 GN=Col5a2 PE=1 SV=1 0 2 2 0.3707 0 1 1 1 641.90015 1282.79302 1282.78834 3.64 0.00234 0/0 0 0 4672398 HCD 30 MS2 22.97051 655.9 110 67.2162 20051 20051 20043 QEplus033719.raw F4 611.4 583.3 713.9 449.1 842.8 734.9 182 2.32 1 FALSE 5.44E-05 0.001893 0.604 -250 96179 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FNCPTK [R].fNcPTk.[S] N-Term(TMT6plex); C3(Carbamidomethyl); K6(TMT6plex) 3 Q8BU14 Translocation protein SEC62 OS=Mus musculus OX=10090 GN=Sec62 PE=1 SV=1 Q05DA2; Q8BU14; Q9CRY0 Translocation protein SEC62 (Fragment) OS=Mus musculus OX=10090 GN=Sec62 PE=2 SV=1; Translocation protein SEC62 OS=Mus musculus OX=10090 GN=Sec62 PE=1 SV=1; Translocation protein SEC62 (Fragment) OS=Mus musculus OX=10090 GN=Sec62 PE=2 SV=1 0 2 2 0.5385 0 1 1 1 612.8443 1224.68132 1224.6811 0.18 0.00011 0/0 0 0 22795066 HCD 30 MS2 14.49102 1374.3 110 67.2209 20053 20053 20043 QEplus033719.raw F4 1265.1 1164.9 1584.2 1110.7 1553.6 1567.4 260 2.08 1 FALSE 0.004939 0.08621 0.045 -250 96183 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQTMANSGIK [R].aQTMANSGIk.[-] N-Term(TMT6plex); K10(TMT6plex) 3 Q3UZG4 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Mus musculus OX=10090 GN=Aimp1 PE=1 SV=1 Q8C2U7; Q3UZG4; P31230 tRNA-binding domain-containing protein OS=Mus musculus OX=10090 GN=Aimp1 PE=2 SV=1; Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Mus musculus OX=10090 GN=Aimp1 PE=1 SV=1; Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Mus musculus OX=10090 GN=Aimp1 PE=1 SV=2 0 2 2 0.6883 0 1 1 1 739.92474 1478.84221 1478.84012 1.41 0.00105 0/0 0 0 22819172 HCD 30 MS2 8.41341 800.3 110 67.2283 20055 20055 20054 QEplus033719.raw F4 814.8 685.8 868.5 701.8 799.7 931.1 450 4.62 1 FALSE 1.14E-05 2.79E-06 1.153 -250 96190 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGSMLGTK [R].gGSMLGTk.[R] N-Term(TMT6plex); K8(TMT6plex) 2 P12382 "ATP-dependent 6-phosphofructokinase, liver type OS=Mus musculus OX=10090 GN=Pfkl PE=1 SV=4" Q8CD98; P12382 "PFK domain-containing protein OS=Mus musculus OX=10090 GN=Pfkl PE=2 SV=1; ATP-dependent 6-phosphofructokinase, liver type OS=Mus musculus OX=10090 GN=Pfkl PE=1 SV=4" 0 2 2 0.3446 0 1 1 1 604.8584 1208.70952 1208.70731 1.82 0.0011 0/0 0 0 12844980 HCD 30 MS2 52.6792 1430.7 110 67.2308 20056 20056 20054 QEplus033719.raw F4 1491.1 1123 1476.4 1309.3 1710.4 1473.7 280 1.77 1 FALSE 1.14E-05 0.0007172 0.691 -250 96198 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGYLAGDK [K].sGYLAGDk.[L] N-Term(TMT6plex); K8(TMT6plex) 3 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4; Q3TZQ2 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 0 2 2 0.543 0 1 1 1 634.86633 1268.72539 1268.72507 0.25 0.00016 0/0 0 0 47291204 HCD 30 MS2 33.66267 1270.6 44.186 67.233 20057 20057 20054 QEplus033719.raw F4 1386.6 1242.5 1331 958.8 1573.1 1131.5 328 2.91 1 FALSE 0.0003996 0.007156 0.455 -250 96208 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGINCFINR [K].hGINcFINR.[Q] N-Term(TMT6plex); C5(Carbamidomethyl) 2 Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 Q9JJD8; Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=2 SV=1; CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 0 3 3 0.7143 0 1 1 1 453.91016 1359.71592 1359.7153 0.45 0.0002 0/0 0 0 23329196 HCD 30 MS2 32.26021 808.1 66.113 67.2353 20058 20058 20054 QEplus033719.raw F4 802.4 616 943.8 744.4 836.2 905.8 264 4.13 1 FALSE 1.14E-05 7.20E-07 1.264 -250 96254 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQGGVQPIPSQGGK [K].sQGGVQPIPSQGGk.[L] N-Term(TMT6plex); K14(TMT6plex) 2 Q6A0A9 Constitutive coactivator of PPAR-gamma-like protein 1 OS=Mus musculus OX=10090 GN=FAM120A PE=1 SV=2 Q6A0A9; Q3V3S0 Constitutive coactivator of PPAR-gamma-like protein 1 OS=Mus musculus OX=10090 GN=FAM120A PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fam120a PE=2 SV=1 0 3 3 0.6768 0 1 1 1 600.01355 1798.0261 1798.02232 2.1 0.00126 0/0 0 0 12619486 HCD 30 MS2 26.58689 1104.4 110 67.2469 20063 20063 20054 QEplus033719.raw F4 1047.9 1006.1 1087.2 871 1420.5 1193.7 425 4.61 1 FALSE 1.14E-05 2.09E-10 1.936 -250 96267 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAEEFTK [K].nAEEFTk.[K] N-Term(TMT6plex); K7(TMT6plex) 4 Q3TIH9; Q561N4 UBC core domain-containing protein OS=Mus musculus OX=10090 GN=Ube2l3 PE=2 SV=1;Ubiquitin-conjugating enzyme E2L 3 OS=Mus musculus OX=10090 GN=Ube2l3 PE=1 SV=1 Q3TIH9; A0A338P7E5; Q3TW19; Q561N4 UBC core domain-containing protein OS=Mus musculus OX=10090 GN=Ube2l3 PE=2 SV=1; Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus OX=10090 GN=Ube2l3 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ube2l3 PE=2 SV=1; Ubiquitin-conjugating enzyme E2L 3 OS=Mus musculus OX=10090 GN=Ube2l3 PE=1 SV=1 0 2 2 0.3939 0 1 1 1 648.8645 1296.72173 1296.71999 1.34 0.00087 0/0 0 0 9349808 HCD 30 MS2 16.66773 953.6 110 67.2567 20066 20066 20065 QEplus033719.raw F4 913.9 783.6 1024.7 823.9 1109.4 1066.1 345 2.97 2 FALSE 0.0003496 0.006727 0.463 -250 96274 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GETENEEFEK [R].gETENEEFEk.[L] N-Term(TMT6plex); K10(TMT6plex) 11 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; F6RGN9; Q3UGC3; E9QA15; F6ZAW1; E9Q0M9; D3Z6I7; S4R1T7; F6T2Z7; E9QA16; F6QLP8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=8; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 0 2 2 0.7167 0 1 1 1 835.42102 1669.83476 1669.83212 1.59 0.00132 0/0 0 0 7937644.5 HCD 30 MS2 64.29803 613.7 110 67.2592 20067 20067 20065 QEplus033719.raw F4 604 629.6 653.8 371.8 891.6 531.3 163 4.13 1 FALSE 1.14E-05 1.72E-08 1.572 -250 96289 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQEAEWK [R].kQEAEWk.[E] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 7 Q6PFA2 Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1 Q6PFA2; O08585; B1AWD9; B1AWD8; B1AWE0; Q3THU7; B1AWE1 Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain A OS=Mus musculus OX=10090 GN=Clta PE=1 SV=2; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=2 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1 1 3 3 0.5045 0 1 1 1 535.992 1605.96146 1605.95675 2.93 0.00157 0/0 0 0 55518336 HCD 30 MS2 22.3745 1475.4 35.151 67.2637 20069 20069 20065 QEplus033719.raw F4 1541.3 1358.1 1558.3 1163.1 1784.6 1447.2 383 3.35 1 FALSE 1.14E-05 0.0002567 0.779 -250 96311 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SKPSYFAER [R].skPSYFAER.[L] N-Term(TMT6plex); K2(TMT6plex) 6 Q7TMN7 Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1 Q7TMN7; D3Z0S1; F7ANV6; A0A0N4SV57; P97429; A0A0N4SW89 Annexin OS=Mus musculus OX=10090 GN=Anxa4 PE=2 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=1; Annexin A4 OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=4; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa4 PE=1 SV=3 0 3 3 0.4735 0 1 1 1 514.96118 1542.86899 1542.86805 0.61 0.00031 0/0 0 0 16069528 HCD 30 MS2 19.81849 1198.5 99.269 67.2708 20072 20072 20065 QEplus033719.raw F4 864.7 1404.2 1724.3 897.8 1000.1 1300 389 2.64 1 FALSE 0.0008268 0.01154 0.38 -250 96330 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VFHDFR [R].vFHDFR.[N] N-Term(TMT6plex) 1 P54823 Probable ATP-dependent RNA helicase DDX6 OS=Mus musculus OX=10090 GN=Ddx6 PE=1 SV=1 P54823 Probable ATP-dependent RNA helicase DDX6 OS=Mus musculus OX=10090 GN=Ddx6 PE=1 SV=1 0 3 3 0.6192 0 1 1 1 350.52917 1049.57297 1049.57298 -0.01 0 0/0 0 0 4234645 HCD 30 MS2 54.89088 350.5 110 67.2758 20074 20074 20065 QEplus033719.raw F4 280.2 410.6 473.3 252.5 272.9 413.2 240 2.81 1 FALSE 0.0002909 0.005941 0.48 -250 96338 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKPAAQSEEETATSPAASPTPQSAER [R].akPAAQSEEETATSPAASPTPQSAER.[S] N-Term(TMT6plex); K2(TMT6plex) 2 Q8JZQ9 Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=1 SV=1 Q8JZQ9; Q8CIJ3 Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=2 SV=1 0 4 4 0.7815 0 1 1 1 768.39996 3070.57802 3070.56931 2.84 0.00218 0/0 0 0 2234033.75 HCD 30 MS2 0 57.5 110 67.2783 20075 20075 20065 QEplus033719.raw F4 57 50.3 67.5 50.8 56.7 62.8 364 8.01 1 FALSE 1.14E-05 6.31E-16 4.09 -250 96354 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQTMANSGIK [R].aQTMANSGIk.[-] N-Term(TMT6plex); K10(TMT6plex) 3 Q3UZG4 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Mus musculus OX=10090 GN=Aimp1 PE=1 SV=1 Q8C2U7; Q3UZG4; P31230 tRNA-binding domain-containing protein OS=Mus musculus OX=10090 GN=Aimp1 PE=2 SV=1; Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Mus musculus OX=10090 GN=Aimp1 PE=1 SV=1; Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 OS=Mus musculus OX=10090 GN=Aimp1 PE=1 SV=2 0 3 3 0.213 0 1 1 1 493.61841 1478.84067 1478.84012 0.37 0.00018 0/0 0 0 26215848 HCD 30 MS2 25.39843 741.2 38.333 67.2879 20078 20078 20076 QEplus033719.raw F4 777.8 542.2 806.6 734.1 684.7 901.7 449 3.99 1 FALSE 0.0001504 0.003275 0.549 -250 96361 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EKPVCGTTYK [K].ekPVcGTTYk.[A] N-Term(TMT6plex); K2(TMT6plex); C5(Carbamidomethyl); K10(TMT6plex) 3 Q60865 Caprin-1 OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=2 Q3UFZ6; F6YLI0; Q60865 Caprin-1_dimer domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Caprin1 PE=2 SV=1; Caprin-1 (Fragment) OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=1; Caprin-1 OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=2 0 3 3 0.5781 0 1 1 1 624.02863 1870.07132 1870.07113 0.1 0.00006 0/0 0 0 15613832 HCD 30 MS2 16.70147 1436.6 84.852 67.2901 20079 20079 20076 QEplus033719.raw F4 1577.6 1079.4 1436.7 1178.9 1724.6 1622.3 348 3.2 1 FALSE 1.14E-05 1.64E-07 1.386 -250 96368 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPQQLESK [K].tPQQLESk.[E] N-Term(TMT6plex); K8(TMT6plex) 1 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 0 2 2 0.2941 0 1 1 1 694.91406 1388.82085 1388.81495 4.25 0.00295 0/0 0 0 12209379 HCD 30 MS2 31.79239 1031.5 110 67.2927 20080 20080 20076 QEplus033719.raw F4 1002.2 849.4 1117.8 784.7 1305.7 1129.3 497 2.55 1 FALSE 0.0006383 0.009857 0.407 -250 96386 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GFPSVDSR [R].gFPSVDSR.[G] N-Term(TMT6plex) 2 G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 Q3UMT7; G5E924 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 0 2 2 0.3131 0 1 1 1 547.29535 1093.58342 1093.58394 -0.47 -0.00026 0/0 0 0 6290974 HCD 30 MS2 46.27077 1369.6 110 67.2977 20082 20082 20076 QEplus033719.raw F4 1504.9 1022 1367.4 1197 1546 1580.5 175 2.14 1 FALSE 0.005276 0.08995 0.034 -250 96393 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVMDSTTTQK [K].dVMDSTTTQk.[Y] N-Term(TMT6plex); K10(TMT6plex) 1 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 0 2 2 0.6811 0 1 1 1 792.41962 1583.83196 1583.83509 -1.98 -0.00157 0/0 0 0 4289727 HCD 30 MS2 24.41596 353.1 110 67.3002 20083 20083 20076 QEplus033719.raw F4 343.6 335.4 387.4 262.8 436.6 353.1 263 3.7 1 FALSE 1.14E-05 2.91E-08 1.529 -250 96403 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEPGATGVQGPPGPAGEEGKR [K].gEPGATGVQGPPGPAGEEGkR.[G] N-Term(TMT6plex); K20(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 1 4 4 0.8039 0 1 1 1 602.32526 2406.2792 2406.27776 0.6 0.00036 0/0 0 0 15588079 HCD 30 MS2 3.960545 452.2 110 67.3027 20084 20084 20076 QEplus033719.raw F4 419.8 430 521.3 349.5 491 501.5 431 6.22 1 FALSE 1.14E-05 6.31E-16 4.12 -250 96415 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IEYAKPTR [K].iEYAkPTR.[L] N-Term(TMT6plex); K5(TMT6plex) 6 G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 G3UY56; Q8R081; G3UY38; Q8BI42; Q3UMT7; G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 0 2 2 0.3917 0 1 1 1 718.43823 1435.86919 1435.86732 1.3 0.00093 0/0 0 0 4667154.5 HCD 30 MS2 49.02974 439.3 110 67.3077 20086 20086 20076 QEplus033719.raw F4 424.8 382.1 471.7 400.8 477.9 478.7 435 2.17 1 FALSE 0.0007056 0.01018 0.401 -250 96435 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGLHSLR [K].lGLHSLR.[HQ] N-Term(TMT6plex) 3 P61205 ADP-ribosylation factor 3 OS=Mus musculus OX=10090 GN=Arf3 PE=2 SV=2 P61205; P84078; Q8BSL7 ADP-ribosylation factor 3 OS=Mus musculus OX=10090 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Mus musculus OX=10090 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Mus musculus OX=10090 GN=Arf2 PE=1 SV=2 0 2 2 0.4372 0 1 1 1 512.82727 1024.64726 1024.64648 0.77 0.00039 0/0 0 0 35050336 HCD 30 MS2 28.11502 891.5 39.592 67.322 20091 20091 20087 QEplus033719.raw F4 799.9 799.9 1072.8 702.9 948.3 1025.3 13 2.31 1 FALSE 0.003817 0.07227 0.082 -250 96454 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSAEAAEK [R].lSAEAAEk.[L] N-Term(TMT6plex); K8(TMT6plex) 3 P49718 DNA replication licensing factor MCM5 OS=Mus musculus OX=10090 GN=Mcm5 PE=1 SV=2 P49718; Q8BQ03; Q8C2I9 DNA replication licensing factor MCM5 OS=Mus musculus OX=10090 GN=Mcm5 PE=1 SV=2; DNA helicase OS=Mus musculus OX=10090 GN=Mcm5 PE=2 SV=1; DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Mcm5 PE=2 SV=1 0 2 2 0.4538 0 1 1 1 638.87988 1276.75249 1276.75129 0.94 0.0006 0/0 0 0 22704968 HCD 30 MS2 27.27018 1329.2 110 67.3268 20093 20093 20087 QEplus033719.raw F4 1241 1452.4 1302.8 761.7 2023.9 1193.3 447 3.46 1 FALSE 0.0001603 0.00383 0.532 -250 96470 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGINCFINR [K].hGINcFINR.[Q] N-Term(TMT6plex); C5(Carbamidomethyl) 2 Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 Q9JJD8; Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=2 SV=1; CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 0 2 2 0.6257 0 1 1 1 680.36176 1359.71623 1359.7153 0.68 0.00046 0/0 0 0 6348987 HCD 30 MS2 0 601.2 110 67.3316 20095 20095 20087 QEplus033719.raw F4 652.5 483.6 698 507.3 589.3 676.6 266 3.42 1 FALSE 1.14E-05 4.30E-05 0.927 -250 96478 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIDQIHK [K].tIDQIHk.[E] N-Term(TMT6plex); K7(TMT6plex) 8 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 Q6NZJ6-2; E9Q9E1; Q6PD42; E9PVC5; E9PVC6; A0A0J9YUS5; Q6NZJ6; Q8K0J8 Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 0 2 2 0.373 0 1 1 1 656.90326 1312.79924 1312.79891 0.26 0.00017 0/0 0 0 2898256.5 HCD 30 MS2 27.40767 458.3 110 67.3341 20096 20096 20087 QEplus033719.raw F4 457.3 354.1 468.5 392.1 559.6 518.1 287 2.52 1 FALSE 0.0005076 0.007915 0.441 -250 96498 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQTAEKEEFEHQQK [K].nQTAEkEEFEHQQk.[E] N-Term(TMT6plex); K6(TMT6plex); K14(TMT6plex) 15 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 1 4 4 0.6235 0 1 1 1 609.08026 2433.29922 2433.29771 0.62 0.00038 0/0 0 0 123841664 HCD 30 MS2 4.122739 549.7 11.111 67.3459 20100 20100 20098 QEplus033719.raw F4 520.7 453.2 709.7 467.6 500.9 645.8 436 5.87 1 FALSE 1.14E-05 3.64E-14 2.65 -250 96515 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EATDAIGHLDR [K].eATDAIGHLDR.[Q] N-Term(TMT6plex) 6 A0A1L1STE4 Interleukin enhancer-binding factor 3 OS=Mus musculus OX=10090 GN=Ilf3 PE=1 SV=1 Q3UD30; Q45VK6; A0A1L1STE4; Q9Z1X4; Q9Z1X4-3; Q45VK5 DZF domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ilf3 PE=2 SV=1; Nuclear factor 90 OS=Mus musculus OX=10090 GN=Ilf3 PE=2 SV=1; Interleukin enhancer-binding factor 3 OS=Mus musculus OX=10090 GN=Ilf3 PE=1 SV=1; Interleukin enhancer-binding factor 3 OS=Mus musculus OX=10090 GN=Ilf3 PE=1 SV=2; Isoform 3 of Interleukin enhancer-binding factor 3 OS=Mus musculus OX=10090 GN=Ilf3; Interleukin enhancer-binding factor 3 OS=Mus musculus OX=10090 GN=Ilf3 PE=1 SV=1 0 3 3 0.7716 0 1 1 1 476.25446 1426.74881 1426.74877 0.03 0.00001 0/0 0 0 20851124 HCD 30 MS2 32.4212 822.3 68.46 67.3504 20102 20102 20098 QEplus033719.raw F4 1071.6 570.8 838.6 790.3 851.2 811.2 201 4.51 1 FALSE 1.14E-05 6.08E-09 1.658 -250 96522 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGNDVAFHFNPR [R].rGNDVAFHFNPR.[F] N-Term(TMT6plex) 4 Q3V471 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1 Q3V471; Q61357; P16110; Q8C253 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1; Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1; Galectin-3 OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=3; Galectin OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=1 1 4 4 0.5736 0 1 1 1 415.47333 1658.87148 1658.87129 0.12 0.00005 0/0 0 0 9675323 HCD 30 MS2 21.88183 293.5 90.093 67.3549 20104 20104 20098 QEplus033719.raw F4 377 188.3 308.3 272.2 243.7 371.6 276 4.69 1 FALSE 1.14E-05 0.0002642 0.776 -250 96550 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FICEQEHEK [K].fIcEQEHEk.[F] N-Term(TMT6plex); C3(Carbamidomethyl); K9(TMT6plex) 4 Q61699 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2 E9Q0U7; Q61699; Q8C6H1; Q61699-2 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=1; Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsph1 PE=2 SV=1; Isoform HSP105-beta of Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 0 3 3 0.6774 0 1 1 1 559.96069 1677.86753 1677.86706 0.28 0.00015 0/0 0 0 19987396 HCD 30 MS2 34.08187 1085.9 86.065 67.3622 20107 20107 20098 QEplus033719.raw F4 1180.8 663.3 1071.1 1307.6 896 1396.7 256 4.03 1 FALSE 1.14E-05 3.16E-08 1.522 -250 96554 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MASVTGK [K].mASVTGk.[R] N-Term(TMT6plex); K7(TMT6plex) 2 Q64521 "Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=2" Q64521; A2AQR0 "Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=2; Glycerol-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=1" 0 2 2 0.4296 0 1 1 1 576.34711 1151.68694 1151.68585 0.94 0.00054 0/0 0 0 18282578 HCD 30 MS2 32.77877 1370.5 110 67.3647 20108 20108 20098 QEplus033719.raw F4 1226.6 1294.1 1503.1 1260.4 1521.5 1417.5 231 2.7 1 FALSE 0.0003408 0.006566 0.467 -250 96564 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASAPATPLSPTR [R].aSAPATPLSPTR.[L] N-Term(TMT6plex) 2 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 P14733; Q8C553 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3; IF rod domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Lmnb1 PE=2 SV=1 0 2 2 0.6538 0 1 1 1 699.40179 1397.79631 1397.79499 0.94 0.00066 0/0 0 0 6593809 HCD 30 MS2 0 355.3 110 67.372 20110 20110 20109 QEplus033719.raw F4 315.2 323.6 399.9 267.3 414.9 410.7 330 3.64 1 FALSE 1.14E-05 4.73E-08 1.489 -250 96574 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VMLADRK [K].vMLADRk.[G] N-Term(TMT6plex); K7(TMT6plex) 2 Q4VA93 Protein kinase C OS=Mus musculus OX=10090 GN=Prkca PE=1 SV=1 P20444; Q4VA93 Protein kinase C alpha type OS=Mus musculus OX=10090 GN=Prkca PE=1 SV=3; Protein kinase C OS=Mus musculus OX=10090 GN=Prkca PE=1 SV=1 1 3 3 0.3684 0 1 1 1 430.93719 1290.79703 1290.7968 0.18 0.00008 0/0 0 0 3926614.25 HCD 30 MS2 60.87855 784.1 110 67.3745 20111 20111 20109 QEplus033719.raw F4 656.3 771.1 902.7 585.3 891.8 897.4 404 2.66 1 FALSE 0.001293 0.01761 0.303 -250 96615 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLDEDASPNEEK [R].kLDEDASPNEEk.[G] N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex) 3 D3YXZ3 Kinesin light chain OS=Mus musculus OX=10090 GN=Klc2 PE=1 SV=1 D3YXZ3; Q91YS4; D3Z5Y7 Kinesin light chain OS=Mus musculus OX=10090 GN=Klc2 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc2 PE=1 SV=1; Kinesin light chain 2 (Fragment) OS=Mus musculus OX=10090 GN=Klc2 PE=1 SV=8 1 3 3 0.6512 0 1 1 1 688.04645 2062.12479 2062.12713 -1.13 -0.00078 0/0 0 0 4331528.5 HCD 30 MS2 46.39447 525.8 110 67.3863 20116 20116 20109 QEplus033719.raw F4 553 387 545.7 534.7 517.8 616.7 444 4.1 1 FALSE 1.14E-05 2.31E-12 2.308 -250 96621 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSLCNNK [K].vSLcNNk.[E] N-Term(TMT6plex); C4(Carbamidomethyl); K7(TMT6plex) 3 B9EKB8 Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1 B9EKB8; B7ZWC4; Q07113 Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Cation-independent mannose-6-phosphate receptor OS=Mus musculus OX=10090 GN=Igf2r PE=1 SV=1 0 2 2 0.4838 0 1 1 1 646.87189 1292.7365 1292.73968 -2.46 -0.00159 0/0 0 0 4712820 HCD 30 MS2 29.90641 626 110 67.3888 20117 20117 20109 QEplus033719.raw F4 552.8 572.6 710.6 557.4 641.7 721.2 440 2.77 1 FALSE 0.0002019 0.004219 0.521 -250 96631 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAEETYENIPGR [K].qAEETYENIPGR.[S] N-Term(TMT6plex) 2 Q8BKC5 Importin-5 OS=Mus musculus OX=10090 GN=Ipo5 PE=1 SV=3 Q3TT04; Q8BKC5 Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Ipo5 PE=2 SV=1; Importin-5 OS=Mus musculus OX=10090 GN=Ipo5 PE=1 SV=3 0 2 2 0.7996 0 1 1 1 818.41187 1635.81645 1635.81758 -0.69 -0.00056 0/0 0 0 2451748.5 HCD 30 MS2 0 255.8 110 67.3913 20118 20118 20109 QEplus033719.raw F4 264.1 203.3 261.7 204.6 320.5 280.6 171 4.84 1 FALSE 1.14E-05 1.03E-09 1.805 -250 96634 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANVEKPVK [K].aNVEkPVk.[ML] N-Term(TMT6plex); K5(TMT6plex); K8(TMT6plex) 7 Q99JX3 Golgi reassembly-stacking protein 2 OS=Mus musculus OX=10090 GN=Gorasp2 PE=1 SV=3 A2ATI8; Q99JX3; Q3TG07; Q3TIK1; Q91X51; A2ATI6; A2ATI9 Golgi reassembly-stacking protein 2 OS=Mus musculus OX=10090 GN=Gorasp2 PE=1 SV=1; Golgi reassembly-stacking protein 2 OS=Mus musculus OX=10090 GN=Gorasp2 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Gorasp2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Gorasp2 PE=2 SV=1; Golgi reassembly-stacking protein 1 OS=Mus musculus OX=10090 GN=Gorasp1 PE=1 SV=3; Golgi reassembly-stacking protein 2 OS=Mus musculus OX=10090 GN=Gorasp2 PE=1 SV=1; Golgi reassembly-stacking protein 2 OS=Mus musculus OX=10090 GN=Gorasp2 PE=1 SV=1 0 3 3 0.5664 0 1 1 1 524.67505 1572.01059 1572.00879 1.15 0.0006 0/0 0 0 25050822 HCD 30 MS2 53.14128 1267.9 42.703 67.3936 20119 20119 20109 QEplus033719.raw F4 1265.9 989.9 1348.3 1363.2 1284.2 1355.9 151 2.56 1 FALSE 0.0003496 0.006894 0.46 -250 96646 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYEEIDNAPEER [K].kYEEIDNAPEER.[A] N-Term(TMT6plex); K1(TMT6plex) 2 Q8BFR5 "Elongation factor Tu, mitochondrial OS=Mus musculus OX=10090 GN=Tufm PE=1 SV=1" Q8BFR5; Q8BFR5-2 "Elongation factor Tu, mitochondrial OS=Mus musculus OX=10090 GN=Tufm PE=1 SV=1; Isoform 2 of Elongation factor Tu, mitochondrial OS=Mus musculus OX=10090 GN=Tufm" 1 3 3 0.6916 0 1 1 1 651.01013 1951.01584 1951.01729 -0.74 -0.00048 0/0 0 0 25240978 HCD 30 MS2 6.422396 1345 110 67.4034 20122 20122 20120 QEplus033719.raw F4 1424.7 1064.4 1507.3 1310 1205.5 1558.2 333 4.41 1 FALSE 1.14E-05 2.90E-10 1.909 -250 96667 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNQGWLDSSR [K].tNQGWLDSSR.[S] N-Term(TMT6plex) 3 Q3TLE2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fermt2 PE=1 SV=1 A6X941; Q3UMA4; Q3TLE2 Fermitin family homolog 2 (Fragment) OS=Mus musculus OX=10090 GN=Fermt2 PE=1 SV=1; B41 domain-containing protein OS=Mus musculus OX=10090 GN=Fermt2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fermt2 PE=1 SV=1 0 2 2 0.7051 0 1 1 1 696.85803 1392.70879 1392.70691 1.35 0.00094 0/0 0 0 9760149 HCD 30 MS2 0 569.1 110 67.4106 20125 20125 20120 QEplus033719.raw F4 623.9 488.3 610.7 487.1 595.2 609.4 199 3.56 1 FALSE 1.14E-05 4.98E-07 1.295 -250 96680 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSLSGEEVDSK [R].sSLSGEEVDSk.[V] N-Term(TMT6plex); K11(TMT6plex) 3 Q3UXN3 Cysteinyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1 Q3UXN3; Q9ER72; Q3U716 "Cysteinyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1; Cysteine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Cars1 PE=1 SV=2; Cysteinyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1" 0 2 2 0.7113 0 1 1 1 798.43011 1595.85295 1595.85285 0.06 0.00005 0/0 0 0 3524798 HCD 30 MS2 0 487.3 110 67.4181 20128 20128 20120 QEplus033719.raw F4 550.7 430.9 532 382 550.8 477.5 349 4.71 1 FALSE 1.14E-05 4.96E-08 1.485 -250 96686 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDAKPEVQSQPPR [R].vDAkPEVQSQPPR.[V] N-Term(TMT6plex); K4(TMT6plex) 4 P97379 Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2 PE=1 SV=2 P97379; P97379-2; Q3U931; Q3U6B1 Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2 PE=1 SV=2; Isoform B of Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2; Uncharacterized protein OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1 0 3 3 0.6186 0 1 1 1 637.03516 1909.09092 1909.09073 0.1 0.00006 0/0 0 0 17540730 HCD 30 MS2 5.647194 1189.2 110 67.4231 20130 20130 20120 QEplus033719.raw F4 1185.3 986.7 1238.2 973.5 1465.9 1285.5 396 2.91 1 FALSE 1.14E-05 6.25E-10 1.846 -250 96699 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDCTADSDVCSAQGVR [K].vDcTADSDVcSAQGVR.[G] N-Term(TMT6plex); C3(Carbamidomethyl); C10(Carbamidomethyl) 5 E9PXX7 Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=1 E9PXX7; Q3UBW8; Q91W90; A0A0R4J1Y7; Q3UWX1 Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Txndc5 PE=2 SV=1; Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=2; Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Txndc5 PE=2 SV=1 0 3 3 0.8492 0 1 1 1 656.96979 1968.89481 1968.89526 -0.23 -0.00015 0/0 0 0 9226241 HCD 30 MS2 6.798262 280 110 67.433 20133 20133 20131 QEplus033719.raw F4 272.4 224.9 281.1 243.1 356.7 302 26 6.3 1 FALSE 1.14E-05 1.39E-14 2.729 -250 96720 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQSTPVK [K].iQSTPVk.[Q] N-Term(TMT6plex); K7(TMT6plex) 6 Q0PD67 Rab1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1 Q5SW87; Q0PD67; Q3UB66; Q5SW86; Q5SW88; Q6ZPF0 "RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; Rab1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab1a PE=2 SV=1; RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; MKIAA3012 protein (Fragment) OS=Mus musculus OX=10090 GN=Rab1a PE=2 SV=1" 0 3 3 0.4306 0 1 1 1 410.93216 1230.78193 1230.78219 -0.22 -0.00009 0/0 0 0 11580346 HCD 30 MS2 57.62029 895.3 102.149 67.4401 20136 20136 20131 QEplus033719.raw F4 965.8 658 1051.6 742.7 789.9 1163.5 496 2.81 1 FALSE 0.00192 0.03277 0.203 -250 96749 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMAQNAIK [R].aMAQNAIk.[A] N-Term(TMT6plex); K8(TMT6plex) 15 S4R2U7 CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2 PE=1 SV=1 S4R2U7; E9QA47; Q9Z0H4; Q9Z0H4-7; Q9Z0H4-11; Q9Z0H4-9; A0A0R4J2B0; Q9Z0H4-4; Q9Z0H4-8; S4R1S7; Q9Z0H4-6; Q9Z0H4-2; V9GX43; Q9Z0H4-5; S4R2S7 CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2 PE=1 SV=1; CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2 PE=1 SV=1; CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2 PE=1 SV=1; Isoform 7 of CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2; Isoform 11 of CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2; Isoform 9 of CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2; CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2 PE=1 SV=1; Isoform 4 of CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2; Isoform 8 of CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2; CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2 PE=1 SV=1; Isoform 6 of CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2; Isoform 2 of CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2; CUGBP Elav-like family member 2 (Fragment) OS=Mus musculus OX=10090 GN=Celf2 PE=1 SV=1; Isoform 5 of CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2; CUGBP Elav-like family member 2 (Fragment) OS=Mus musculus OX=10090 GN=Celf2 PE=1 SV=8 0 2 2 0.5047 0 1 1 1 652.88892 1304.77056 1304.77606 -4.22 -0.00275 0/0 0 0 14634303 HCD 30 MS2 60.02355 1712.9 110 67.4522 20141 20141 20131 QEplus033719.raw F4 1678.4 1373.6 2010 1431 1734.3 2049.8 584 3.17 1 FALSE 1.14E-05 0.0001057 0.852 -250 96757 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGSSKPEASRPLTTGAPK [K].aGSSkPEASRPLTTGAPk.[I] N-Term(TMT6plex); K5(TMT6plex); K18(TMT6plex) 3 Q3U422 Complex I-9kD OS=Mus musculus OX=10090 GN=Ndufv3 PE=1 SV=1 Q3U422; Q3U4K3; Q91WP8 Complex I-9kD OS=Mus musculus OX=10090 GN=Ndufv3 PE=1 SV=1; Complex I-9kD (Fragment) OS=Mus musculus OX=10090 GN=Ndufv3 PE=2 SV=1; Complex I-9kD OS=Mus musculus OX=10090 GN=Ndufv3 PE=2 SV=1 0 4 4 0.435 0 1 1 1 611.36322 2442.43105 2442.42833 1.11 0.00068 0/0 0 0 6732098 HCD 30 MS2 15.59584 537 110 67.4595 20143 20143 20142 QEplus033719.raw F4 541.4 474 598.9 483.1 579.4 545.3 308 2.46 1 FALSE 0.001456 0.02101 0.273 -250 96764 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSLSGEEVDSK [R].sSLSGEEVDSk.[V] N-Term(TMT6plex); K11(TMT6plex) 3 Q3UXN3 Cysteinyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1 Q3UXN3; Q9ER72; Q3U716 "Cysteinyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1; Cysteine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Cars1 PE=1 SV=2; Cysteinyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1" 0 3 3 0.6063 0 1 1 1 532.62408 1595.8577 1595.85285 3.04 0.00162 0/0 0 0 7103566 HCD 30 MS2 8.462537 601.4 110 67.462 20144 20144 20142 QEplus033719.raw F4 606.8 526.9 652.2 468.7 691 662.6 363 3.48 1 FALSE 1.14E-05 6.10E-05 0.898 -250 96778 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDCTADSDVCSAQGVR [K].vDcTADSDVcSAQGVR.[G] N-Term(TMT6plex); C3(Carbamidomethyl); C10(Carbamidomethyl) 5 E9PXX7 Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=1 E9PXX7; Q3UBW8; Q91W90; A0A0R4J1Y7; Q3UWX1 Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Txndc5 PE=2 SV=1; Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=2; Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Txndc5 PE=2 SV=1 0 2 2 0.8854 0 1 1 1 984.95227 1968.89726 1968.89526 1.02 0.001 0/0 0 0 6286820.5 HCD 30 MS2 0 254.6 110 67.4671 20146 20146 20142 QEplus033719.raw F4 251.7 243.1 272.8 186.8 319.6 253.8 27 6.11 1 FALSE 1.14E-05 6.31E-16 3.161 -250 96792 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EKPQMPTAHAAQSQK [R].ekPQMPTAHAAQSQk.[Q] N-Term(TMT6plex); K2(TMT6plex); K15(TMT6plex) 2 Q91VX2 Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1 Q91VX2; A2AMY5 Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1; Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1 0 4 4 0.7073 0 1 1 1 585.58246 2339.308 2339.31086 -1.22 -0.00071 0/0 0 0 5331917.5 HCD 30 MS2 19.99115 450.5 110 67.4718 20148 20148 20142 QEplus033719.raw F4 453.7 374.4 538.3 375.7 486.3 474.8 439 6.73 1 FALSE 1.14E-05 1.38E-13 2.54 -250 96803 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSLAGDTSNSSSPASTGAK [R].tSLAGDTSNSSSPASTGAk.[A] N-Term(TMT6plex); K19(TMT6plex) 20 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 Q9QXZ0-3; B1ARU4; Q9CYG3; E9QA63; Q80TZ5; F6RL59; E9QNP1; Q4QQN2; F6RCJ3; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; F6YKN8; Q80ZZ3; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8 Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; MKIAA0465 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=2; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Macf1 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Macf1 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 3 3 0.7712 0 1 1 1 733.05017 2197.13596 2197.13484 0.51 0.00037 0/0 0 0 8283561 HCD 30 MS2 32.27156 334.5 110 67.4768 20150 20150 20142 QEplus033719.raw F4 364.7 141.8 376 429.8 169.3 525.6 364 5.77 3 FALSE 1.14E-05 4.96E-15 2.814 -250 96812 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSPEEALK [K].sSPEEALk.[K] N-Term(TMT6plex); K8(TMT6plex) 2 Q8WTY4 Anamorsin OS=Mus musculus OX=10090 GN=Ciapin1 PE=1 SV=1 Q8WTY4; F7BWP1 Anamorsin OS=Mus musculus OX=10090 GN=Ciapin1 PE=1 SV=1; Anamorsin (Fragment) OS=Mus musculus OX=10090 GN=Ciapin1 PE=1 SV=2 0 2 2 0.452 0 1 1 1 659.88531 1318.76335 1318.76185 1.14 0.00075 0/0 0 0 7312581 HCD 30 MS2 12.48294 844.8 110 67.4819 20152 20152 20142 QEplus033719.raw F4 843.5 742.2 920.9 650.6 988.9 922.8 461 2.81 1 FALSE 0.0008183 0.01128 0.384 -250 96819 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALEEAMEQK [R].aLEEAmEQk.[A] N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex) 4 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 0 2 2 0.0877 0 1 1 1 761.9126 1522.81792 1522.81872 -0.52 -0.0004 0/0 0 0 6635561.5 HCD 30 MS2 0 499.9 110 67.4892 20154 20154 20153 QEplus033719.raw F4 633.2 396.3 500.2 372 632.7 464.9 364 2.28 1 FALSE 0.0001504 0.003347 0.547 -250 96833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQSTPVK [K].iQSTPVk.[Q] N-Term(TMT6plex); K7(TMT6plex) 6 Q0PD67 Rab1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1 Q5SW87; Q0PD67; Q3UB66; Q5SW86; Q5SW88; Q6ZPF0 "RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; Rab1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab1a PE=2 SV=1; RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; MKIAA3012 protein (Fragment) OS=Mus musculus OX=10090 GN=Rab1a PE=2 SV=1" 0 2 2 0.2412 0 1 1 1 615.89514 1230.78301 1230.78219 0.66 0.00041 0/0 0 0 94906832 HCD 30 MS2 7.750824 1063.5 22.627 67.4939 20156 20156 20153 QEplus033719.raw F4 1068.4 897.9 1139.2 865.7 1249.6 1160.3 451 2.57 1 FALSE 0.0008183 0.01128 0.384 -250 96850 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSSDEDLK [R].vSSDEDLk.[L] N-Term(TMT6plex); K8(TMT6plex) 4 Q3TJN6 Sorting nexin OS=Mus musculus OX=10090 GN=Snx5 PE=2 SV=1 Q8C5E7; Q3TJN6; Q3TXT4; Q9D8U8 Sorting nexin OS=Mus musculus OX=10090 GN=Snx5 PE=2 SV=1; Sorting nexin OS=Mus musculus OX=10090 GN=Snx5 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Snx5 PE=2 SV=1; Sorting nexin-5 OS=Mus musculus OX=10090 GN=Snx5 PE=1 SV=1 0 2 2 0.5588 0 1 1 1 675.87964 1350.752 1350.75168 0.24 0.00016 0/0 0 0 10950841 HCD 30 MS2 35.34614 1038 110 67.4987 20158 20158 20153 QEplus033719.raw F4 1022.5 822.8 1245.1 991.7 1059.3 1086.6 365 2.72 1 FALSE 0.0001603 0.003733 0.535 -250 96857 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTLGVAQK [K].qTLGVAQk.[-] N-Term(TMT6plex); K8(TMT6plex) 2 Q8BMD8 Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus OX=10090 GN=Slc25a24 PE=1 SV=1 Q8BMD8; Q8R225 Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus OX=10090 GN=Slc25a24 PE=1 SV=1; Slc25a24 protein (Fragment) OS=Mus musculus OX=10090 GN=Slc25a24 PE=2 SV=1 0 3 3 0.2336 0 1 1 1 434.94357 1302.81617 1302.81456 1.23 0.00054 0/0 0 0 10557102 HCD 30 MS2 25.09878 726.4 108.116 67.5012 20159 20159 20153 QEplus033719.raw F4 739.4 615.7 797.9 577.6 820.3 807.3 398 3.04 1 FALSE 3.35E-05 0.001332 0.636 -250 96876 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HDGAFLIR [R].hDGAFLIR.[E] N-Term(TMT6plex) 3 Q3U5I5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Grb2 PE=2 SV=1 Q3U5I5; Q3U1Q4; B1AT92 Uncharacterized protein OS=Mus musculus OX=10090 GN=Grb2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Grb2 PE=2 SV=1; Growth factor receptor-bound protein 2 OS=Mus musculus OX=10090 GN=Grb2 PE=1 SV=1 0 3 3 0.5835 0 1 1 1 386.55859 1157.66123 1157.66286 -1.41 -0.00054 0/0 0 0 2273764.5 HCD 30 MS2 23.1233 306.2 110 67.5061 20161 20161 20153 QEplus033719.raw F4 300.3 243.9 317.9 267.2 325.4 382.8 200 3.89 1 FALSE 1.14E-05 8.55E-05 0.87 -250 96880 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYSGQGVVK [R].dYSGQGVVk.[L] N-Term(TMT6plex); K9(TMT6plex) 8 O88342 WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3 Q3TNK2; O88342; Q9DC08; Q3TE06; Q3U136; A0A0J9YU05; Q9DBM8; Q80ZI9 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat domain 1 (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1 0 2 2 0.613 0 1 1 1 705.90479 1410.80229 1410.7993 2.12 0.0015 0/0 0 0 5349094 HCD 30 MS2 43.86127 732.8 110 67.5087 20162 20162 20153 QEplus033719.raw F4 769.4 650.6 727.9 519.9 1061.4 667.6 335 3.54 1 FALSE 1.14E-05 1.64E-06 1.197 -250 96892 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRLDQELK [K].sRLDQELk.[L] N-Term(TMT6plex); K8(TMT6plex) 7 Q6ZWN5 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3 F7CJS8; D3YWH9; D3YUV6; Q96EC0; D3Z673; Q6ZWN5; Q9CXW7 40S ribosomal protein S9 (Fragment) OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=1; 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=1; 40S ribosomal protein S9 (Fragment) OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=8; 40S ribosomal protein S9 (Fragment) OS=Mus musculus OX=10090 GN=Rps9 PE=2 SV=1; 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=1; 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=3; 40S ribosomal protein S9 OS=Mus musculus OX=10090 GN=Rps9 PE=1 SV=1 1 3 3 0.4803 0 1 1 1 482.96124 1446.86917 1446.86805 0.78 0.00038 0/0 0 0 136513776 HCD 30 MS2 4.888543 708.2 12.235 67.5185 20165 20165 20164 QEplus033719.raw F4 627.3 586.1 828.6 593.4 741.1 872.7 455 3.56 1 FALSE 1.14E-05 3.67E-05 0.94 -250 96898 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHQETFGK [K].iHQETFGk.[S] N-Term(TMT6plex); K8(TMT6plex) 2 B2RSV4 "Splicing factor 3b, subunit 3 OS=Mus musculus OX=10090 GN=Sf3b3 PE=2 SV=1" Q921M3-2; B2RSV4 "Isoform 2 of Splicing factor 3B subunit 3 OS=Mus musculus OX=10090 GN=Sf3b3; Splicing factor 3b, subunit 3 OS=Mus musculus OX=10090 GN=Sf3b3 PE=2 SV=1" 0 3 3 0.7147 0 1 1 1 473.27866 1417.82141 1417.82037 0.74 0.00035 0/0 0 0 32198676 HCD 30 MS2 45.37243 939.9 44.706 67.5208 20166 20166 20164 QEplus033719.raw F4 1008.3 786.9 1061.4 780.4 1016.5 985.8 439 3.19 1 FALSE 1.14E-05 0.0001749 0.811 -250 96913 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYELGRPAANTK [R].kYELGRPAANTk.[I] N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex) 6 P62242 40S ribosomal protein S8 OS=Mus musculus OX=10090 GN=Rps8 PE=1 SV=2 Q3UJU6; Q3UA25; Q9CQW4; P62242; Q5M9L9; Q9CRJ5 40S ribosomal protein S8 (Fragment) OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1; 40S ribosomal protein S8 (Fragment) OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1; 40S ribosomal protein S8 (Fragment) OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1; 40S ribosomal protein S8 OS=Mus musculus OX=10090 GN=Rps8 PE=1 SV=2; 40S ribosomal protein S8 OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1; 40S ribosomal protein S8 (Fragment) OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1 1 4 4 0.5539 0 1 1 1 509.56201 2035.22622 2035.22672 -0.25 -0.00013 0/0 0 0 26708926 HCD 30 MS2 32.99312 1355.6 55.247 67.5253 20168 20168 20164 QEplus033719.raw F4 1322.5 1215.3 1616.7 1279.4 1110.9 1588.9 327 3.99 1 FALSE 1.14E-05 0.0001683 0.814 -250 96933 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEWEGK [K].aEWEGk.[G] N-Term(TMT6plex); K6(TMT6plex) 4 E0CYH4 WD repeat-containing protein 26 (Fragment) OS=Mus musculus OX=10090 GN=Wdr26 PE=1 SV=1 E0CYH4; A0A494BB75; Q8C6G8; B2RTG7 WD repeat-containing protein 26 (Fragment) OS=Mus musculus OX=10090 GN=Wdr26 PE=1 SV=1; WD repeat-containing protein 26 OS=Mus musculus OX=10090 GN=Wdr26 PE=1 SV=2; WD repeat-containing protein 26 OS=Mus musculus OX=10090 GN=Wdr26 PE=1 SV=3; WD repeat domain 26 OS=Mus musculus OX=10090 GN=Wdr26 PE=2 SV=1 0 2 2 0.3727 0 1 1 1 589.33466 1177.66203 1177.66174 0.25 0.00015 0/0 0 0 5824441.5 HCD 30 MS2 0 939.8 110 67.5326 20171 20171 20164 QEplus033719.raw F4 950.6 755.1 936.3 808.2 1090.5 1097.9 284 2.71 1 FALSE 0.002275 0.04477 0.158 -250 96941 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FICEQEHEK [K].fIcEQEHEk.[F] N-Term(TMT6plex); C3(Carbamidomethyl); K9(TMT6plex) 4 Q61699 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2 E9Q0U7; Q61699; Q8C6H1; Q61699-2 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=1; Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsph1 PE=2 SV=1; Isoform HSP105-beta of Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 0 2 2 0.7029 0 1 1 1 839.43604 1677.86479 1677.86706 -1.35 -0.00113 0/0 0 0 2198355.25 HCD 30 MS2 0 180.2 110 67.5351 20172 20172 20164 QEplus033719.raw F4 182.1 137.1 202.2 169.6 173.6 216.8 252 3.77 1 FALSE 1.14E-05 5.39E-06 1.098 -250 96945 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLGEANTTLDR [R].nLGEANTTLDR.[I] N-Term(TMT6plex) 2 Q52KR3 Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2 PE=1 SV=2 Q52KR3-6; Q52KR3 Isoform 6 of Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2; Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2 PE=1 SV=2 0 2 2 0.5113 0 1 1 1 716.88373 1432.76018 1432.75934 0.59 0.00042 0/0 0 0 9746912 HCD 30 MS2 14.53669 412.5 110 67.5376 20173 20173 20164 QEplus033719.raw F4 441.8 350.1 426.3 381.7 450.6 424.3 284 3.99 1 FALSE 1.14E-05 8.06E-10 1.825 -250 96961 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQLAIVERR [K].eQLAIVERR.[AN] N-Term(TMT6plex) 5 P13541; P13542 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; P13541; B1AR69; M0QWL0; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin, heavy polypeptide 13, skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Myh13 PE=4 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 3 3 0.4066 0 1 1 1 448.27319 1342.80503 1342.80041 3.44 0.00154 0/0 0 0 11123393 HCD 30 MS2 31.32347 623.1 73.639 67.5474 20176 20176 20175 QEplus033719.raw F4 686.1 437.4 646.7 588.8 587.4 792.5 285 3.91 2 FALSE 1.14E-05 6.61E-06 1.082 -250 96973 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSVAAQEAAR [R].lSVAAQEAAR.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5214 0 1 1 1 622.86237 1244.71745 1244.71602 1.16 0.00072 0/0 0 0 93358840 HCD 30 MS2 2.400529 844.3 22.589 67.5522 20178 20178 20175 QEplus033719.raw F4 831.5 724.1 939 751.6 855.8 963.7 340 3.51 2 FALSE 1.14E-05 4.82E-08 1.487 -250 96983 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEVQATDREENK [K].lEVQATDREENk.[Q] N-Term(TMT6plex); K12(TMT6plex) 3 Q04750 DNA topoisomerase 1 OS=Mus musculus OX=10090 GN=Top1 PE=1 SV=2 Q6LBJ1; Q04750; Q3TSR2 Topoisomerase I (Fragment) OS=Mus musculus OX=10090 GN=TOP PE=4 SV=1; DNA topoisomerase 1 OS=Mus musculus OX=10090 GN=Top1 PE=1 SV=2; TOPEUc domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Top1 PE=2 SV=1 1 3 3 0.6465 0 1 1 1 630.68298 1890.0344 1890.03328 0.59 0.00037 0/0 0 0 22665872 HCD 30 MS2 5.049192 1533.1 110 67.5547 20179 20179 20175 QEplus033719.raw F4 1396.5 1320.9 1850.2 1222 1534.1 1875.2 468 3.96 1 FALSE 1.14E-05 1.12E-08 1.608 -250 96992 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMVEEGTGLR [R].sMVEEGTGLR.[L] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5597 0 1 1 1 654.34479 1307.6823 1307.68267 -0.28 -0.00018 0/0 0 0 21421182 HCD 30 MS2 40.25233 1095.6 87.027 67.557 20180 20180 20175 QEplus033719.raw F4 1179.1 978.9 1197.8 887 1139.5 1191 219 4.02 2 FALSE 1.14E-05 5.80E-07 1.282 -250 97024 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKDEVVR [R].lkDEVVR.[A] N-Term(TMT6plex); K2(TMT6plex) 2 Q9CU62 Structural maintenance of chromosomes protein 1A OS=Mus musculus OX=10090 GN=Smc1a PE=1 SV=4 A0JLM6; Q9CU62 Structural maintenance of chromosomes protein 1A (Fragment) OS=Mus musculus OX=10090 GN=Smc1a PE=2 SV=1; Structural maintenance of chromosomes protein 1A OS=Mus musculus OX=10090 GN=Smc1a PE=1 SV=4 1 3 3 0.3944 0 1 1 1 439.61557 1316.83216 1316.83021 1.48 0.00065 0/0 0 0 7467409.5 HCD 30 MS2 33.89311 1064.9 106.132 67.5667 20184 20184 20175 QEplus033719.raw F4 1025 998.9 1153.9 691.4 1362.6 1157.6 308 1.8 1 FALSE 0.001778 0.03027 0.215 -250 97030 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CATITPDEK [K].cATITPDEk.[R] N-Term(TMT6plex); C1(Carbamidomethyl); K9(TMT6plex) 9 O88844 Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2 Q3TJ51; Q0QER9; O88844; Q5HZJ8; A0A087WPT4; A0A087WRS9; D3YVY3; Q8C338; A0A087WRM4 Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; IDP (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1 0 2 2 0.4762 0 1 1 1 746.9082 1492.80913 1492.80815 0.66 0.00049 0/0 0 0 7855246 HCD 30 MS2 0 662 110 67.5692 20185 20185 20175 QEplus033719.raw F4 700.9 631.7 784.2 557.4 600.3 697.6 344 3.36 1 FALSE 1.14E-05 0.000131 0.835 -250 97036 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQGVMVGMGQK [R-].hQGVMVGMGQk.[D] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3UCF8; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 3 3 0.7593 0 1 1 1 543.97174 1629.90067 1629.89692 2.3 0.00125 0/0 0 0 1325831936 HCD 30 MS2 5.114732 468.4 1.279 67.5765 20187 20187 20186 QEplus033719.raw F4 459.6 353.6 541.1 409 470.1 577 392 5.4 4 FALSE 1.14E-05 1.23E-11 2.17 -250 97048 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HNYYTSISK [K].hNYYTSISk.[D] N-Term(TMT6plex); K9(TMT6plex) 1 Q5NCI4 Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam2 PE=1 SV=1 Q5NCI4 Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam2 PE=1 SV=1 0 3 3 0.7562 0 1 1 1 524.29291 1570.86417 1570.86296 0.77 0.0004 0/0 0 0 24977188 HCD 30 MS2 41.31609 1040.5 46.591 67.581 20189 20189 20186 QEplus033719.raw F4 1131 693 991.8 1558.8 827.1 1041.5 397 3.65 1 FALSE 1.14E-05 0.000137 0.831 -250 97054 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LECVEPNCR [R].lEcVEPNcR.[S] N-Term(TMT6plex); C3(Carbamidomethyl); C8(Carbamidomethyl) 2 Q5M9P1 Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1 A0A2I3BPG9; Q5M9P1 "Ribosomal protein L36A, pseudogene 1 OS=Mus musculus OX=10090 GN=Rpl36a-ps1 PE=3 SV=1; Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1" 0 3 3 0.5957 0 1 1 1 469.23071 1405.67759 1405.67654 0.75 0.00035 0/0 0 0 24112588 HCD 30 MS2 36.26618 595.8 77.832 67.5833 20190 20190 20186 QEplus033719.raw F4 612 475.5 652.2 508.8 670.2 656.2 74 3.24 1 FALSE 0.00079 0.01095 0.389 -250 97069 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AINTAVK [K].aINTAVk.[S] N-Term(TMT6plex); K7(TMT6plex) 2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q80U36; Q9JHU4 MKIAA0325 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 2 2 0.4144 0 1 1 1 587.88226 1174.75725 1174.75598 1.08 0.00064 0/0 0 0 15967667 HCD 30 MS2 19.88709 1468.2 110 67.588 20192 20192 20186 QEplus033719.raw F4 1570.9 1212.4 1502.9 1262.6 1701.5 1558.7 180 2.92 1 FALSE 0.0004888 0.007682 0.445 -250 97079 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LCTSATESEVTR [R].lcTSATESEVTR.[G] N-Term(TMT6plex); C2(Carbamidomethyl) 4 Q9CZ13 "Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrc1 PE=1 SV=2" Q8VEJ2; A0A0A6YWX6; Q9CZ13; Q3TIC8 "Uqcrc1 protein (Fragment) OS=Mus musculus OX=10090 GN=Uqcrc1 PE=2 SV=1; Cytochrome b-c1 complex subunit 1, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Uqcrc1 PE=1 SV=1; Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrc1 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Uqcrc1 PE=2 SV=1" 0 2 2 0.8062 0 1 1 1 791.90192 1582.79656 1582.7944 1.36 0.00108 0/0 0 0 13599570 HCD 30 MS2 0 539.7 110 67.5906 20193 20193 20186 QEplus033719.raw F4 566.8 434.7 588.7 630.3 408.4 609.1 170 4.49 1 FALSE 1.14E-05 3.57E-10 1.892 -250 97087 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEELEAGR [R].mEELEAGR.[E] N-Term(TMT6plex) 4 Q80UL3 Galactokinase 1 OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1 Q80UL3; Q9R0N0; Q9CXZ9; Q9CWW5 Galactokinase 1 OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1; Galactokinase OS=Mus musculus OX=10090 GN=Galk1 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Galk1 PE=2 SV=1 0 2 2 0.3092 0 1 1 1 582.30035 1163.59343 1163.59279 0.55 0.00032 0/0 0 0 13599114 HCD 30 MS2 47.82409 1400.7 86.121 67.5928 20194 20194 20186 QEplus033719.raw F4 1403.4 1240.2 1449.9 1216.2 1589.2 1505.6 188 3.04 1 FALSE 1.14E-05 0.0006258 0.703 -250 97098 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KWQDDTGKK [K].kWQDDTGkk.[Q] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex); K9(TMT6plex) 7 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB15; Q3UB90; Q3U9L3; Q3T9U9; A0A087WQK0; P27659 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 (Fragment) OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3 2 4 4 0.618 0 1 1 1 506.30948 2022.21609 2022.21538 0.35 0.00018 0/0 0 0 166216256 HCD 30 MS2 20.24515 1173.3 8.542 67.5976 20196 20196 20186 QEplus033719.raw F4 1274 840.3 1171.1 1088.6 1474.4 1191.2 310 2.67 1 FALSE 0.000565 0.00865 0.427 -250 97107 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AFEEAEK [K].aFEEAEk.[N] N-Term(TMT6plex); K7(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 0 2 2 0.5392 0 1 1 1 641.35864 1281.71001 1281.70909 0.72 0.00046 0/0 0 0 249334160 HCD 30 MS2 5.8708 1237 9.427 67.6049 20198 20198 20197 QEplus033719.raw F4 1297 1059.5 1368.1 1014.1 1310 1373.6 355 3.06 1 FALSE 0.001074 0.01383 0.348 -250 97136 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TMYLEDR [K].tMYLEDR.[T] N-Term(TMT6plex) 4 Q0PD54 Rab6A OS=Mus musculus OX=10090 GN=Rab6a PE=2 SV=1 Q0PD53; P35279-2; D3YV69; Q0PD54 Rab6B OS=Mus musculus OX=10090 GN=Rab6b PE=1 SV=1; Isoform 2 of Ras-related protein Rab-6A OS=Mus musculus OX=10090 GN=Rab6a; Ras-related protein Rab-6A OS=Mus musculus OX=10090 GN=Rab6a PE=1 SV=1; Rab6A OS=Mus musculus OX=10090 GN=Rab6a PE=2 SV=1 0 2 2 0.5149 0 1 1 1 578.79749 1156.58769 1156.58698 0.62 0.00036 0/0 0 0 11751239 HCD 30 MS2 41.87624 1148.3 110 67.6145 20202 20202 20197 QEplus033719.raw F4 1130 983.2 1273.2 1016.5 1230 1257.1 116 2.68 1 FALSE 0.0003496 0.00678 0.462 -250 97153 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADGIVSK [K].aDGIVSk.[N-] N-Term(TMT6plex); K7(TMT6plex) 2 Q9CQR2 40S ribosomal protein S21 OS=Mus musculus OX=10090 GN=Rps21 PE=1 SV=1 Q9CQR2; Q8C1L7 40S ribosomal protein S21 OS=Mus musculus OX=10090 GN=Rps21 PE=1 SV=1; 40S ribosomal protein S21 OS=Mus musculus OX=10090 PE=2 SV=1 0 3 3 0.0476 2 2 3 383.24271 1147.71357 1147.70869 4.24 0.00162 0/0 0 0 6073061.5 HCD 30 MS2 9.076694 484.1 110 67.6195 20204 20204 20197 QEplus033719.raw F4 421.1 406.6 520.6 385.3 562.7 608.2 422 2 1 FALSE 0.004939 0.08633 0.044 -250 97167 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KWQDDTGKK [K].kWQDDTGkk.[Q] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex); K9(TMT6plex) 7 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB15; Q3UB90; Q3U9L3; Q3T9U9; A0A087WQK0; P27659 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 (Fragment) OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3 2 3 3 0.5033 0 1 1 1 674.74384 2022.21695 2022.21538 0.78 0.00053 0/0 0 0 32393440 HCD 30 MS2 34.9603 1525.1 110 67.6242 20206 20206 20197 QEplus033719.raw F4 1676.1 1108.2 1515.8 1418.6 1851.8 1579.9 316 3.06 1 FALSE 1.14E-05 1.39E-06 1.21 -250 97182 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AFEEAEK [K].aFEEAEk.[N] N-Term(TMT6plex); K7(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 0 3 3 0.5344 0 1 1 1 427.90833 1281.71042 1281.70909 1.04 0.00044 0/0 0 0 25609284 HCD 30 MS2 46.39315 538.7 38.94 67.6338 20209 20209 20208 QEplus033719.raw F4 529.2 441.7 599.4 431.2 539.3 691.6 358 2.47 1 FALSE 0.004692 0.08246 0.055 -250 97187 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYELGRPAANTK [R].kYELGRPAANTk.[I] N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex) 6 P62242 40S ribosomal protein S8 OS=Mus musculus OX=10090 GN=Rps8 PE=1 SV=2 Q3UJU6; Q3UA25; Q9CQW4; P62242; Q5M9L9; Q9CRJ5 40S ribosomal protein S8 (Fragment) OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1; 40S ribosomal protein S8 (Fragment) OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1; 40S ribosomal protein S8 (Fragment) OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1; 40S ribosomal protein S8 OS=Mus musculus OX=10090 GN=Rps8 PE=1 SV=2; 40S ribosomal protein S8 OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1; 40S ribosomal protein S8 (Fragment) OS=Mus musculus OX=10090 GN=Rps8 PE=2 SV=1 1 3 3 0.6033 0 1 1 1 679.08136 2035.22953 2035.22672 1.38 0.00094 0/0 0 0 14730377 HCD 30 MS2 12.51265 679.8 110 67.6363 20210 20210 20208 QEplus033719.raw F4 616 637.2 812.2 653.2 642.4 718 297 2.42 1 FALSE 1.14E-05 1.07E-08 1.612 -250 97205 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQQALVQK [K].aQQALVQk.[R] N-Term(TMT6plex); K8(TMT6plex) 4 Q3TJD4 ATP synthase subunit b OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1 Q3TJD4; Q9CQQ7; A0A0G2JGX3; Q3UF04 "ATP synthase subunit b OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1; ATP synthase F(0) complex subunit B1, mitochondrial OS=Mus musculus OX=10090 GN=Atp5pb PE=1 SV=1; ATP synthase subunit b (Fragment) OS=Mus musculus OX=10090 GN=Atp5pb PE=1 SV=1; ATP synthase subunit b OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1" 0 2 2 0.644 0 1 1 1 672.42493 1343.84258 1343.84111 1.09 0.00074 0/0 0 0 51100156 HCD 30 MS2 5.91851 1089.3 44.46 67.6408 20212 20212 20208 QEplus033719.raw F4 1092 772 1102.9 1246 917.6 1405.6 345 3.82 1 FALSE 1.14E-05 0.0001371 0.831 -250 97211 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YVLHCQGTEEEK [R].yVLHcQGTEEEk.[I] N-Term(TMT6plex); C5(Carbamidomethyl); K12(TMT6plex) 6 Q3TDF8 Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus OX=10090 GN=Etf1 PE=2 SV=1 Q3TDF8; Q3TL10; Q3U6V5; Q3TF02; P70199; Q8BWY3 Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus OX=10090 GN=Etf1 PE=2 SV=1; Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus OX=10090 GN=Etf1 PE=2 SV=1; Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus OX=10090 GN=Etf1 PE=2 SV=1; Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus OX=10090 GN=Etf1 PE=2 SV=1; ERF1 (Fragment) OS=Mus musculus OX=10090 GN=Etf1 PE=2 SV=1; Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus OX=10090 GN=Etf1 PE=1 SV=4 0 3 3 0.2939 0 1 1 1 651.0069 1951.00614 1950.99953 3.39 0.0022 0/0 0 0 35857716 HCD 30 MS2 12.22879 875.4 50.51 67.6431 20213 20213 20208 QEplus033719.raw F4 839.1 770.9 917.6 807.7 990 927.2 308 4.73 1 FALSE 1.14E-05 1.45E-07 1.397 -250 97226 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQAMPFK [R].rQAMPFk.[C] N-Term(TMT6plex); K7(TMT6plex) 4 Q9CR57; Q569Z0 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14 PE=1 SV=3;60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14-ps1 PE=2 SV=1 Q922F9; Q9CR57; Q569Z0; Q9CWK0 60S ribosomal protein L14 (Fragment) OS=Mus musculus OX=10090 GN=Rpl14-ps1 PE=2 SV=1; 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14 PE=1 SV=3; 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14-ps1 PE=2 SV=1; 60S ribosomal protein L14 OS=Mus musculus OX=10090 GN=Rpl14 PE=2 SV=1 1 3 3 0.3841 0 1 1 1 445.93814 1335.79987 1335.79713 2.05 0.00091 0/0 0 0 14885249 HCD 30 MS2 55.04882 1069.8 46.666 67.6478 20215 20215 20208 QEplus033719.raw F4 1029.3 922.2 1265 994.6 1074.5 1133 298 2.89 2 FALSE 0.0002019 0.004233 0.521 -250 97240 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPAVVAK [K].kPAVVAk.[S] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 2 O70251 Elongation factor 1-beta OS=Mus musculus OX=10090 GN=Eef1b PE=1 SV=5 A0A087WS46; O70251 Eukaryotic translation elongation factor 1 beta 2 OS=Mus musculus OX=10090 GN=Eef1b2 PE=1 SV=1; Elongation factor 1-beta OS=Mus musculus OX=10090 GN=Eef1b PE=1 SV=5 0 2 2 0.2804 0 1 1 1 700.48462 1399.96196 1399.96038 1.13 0.00079 0/0 0 0 4564037 HCD 30 MS2 0 377 110 67.6528 20217 20217 20208 QEplus033719.raw F4 591.6 231.7 387.2 344.4 295.9 411.1 59 2.14 1 FALSE 0.006298 0.1023 0 -250 97256 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQGVMVGMGQK [R-].hQGVMVGMGQk.[D] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3UCF8; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 2 2 0.7681 0 1 1 1 815.45325 1629.89922 1629.89692 1.41 0.00115 0/0 0 0 49984088 HCD 30 MS2 7.125837 921.3 43.718 67.6624 20220 20220 20219 QEplus033719.raw F4 932.6 646.2 1084.3 759.6 951.8 1153.5 389 4.01 4 FALSE 1.14E-05 3.90E-09 1.695 -250 97263 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAGLRPMEK [K].tAGLRPMEk.[K] N-Term(TMT6plex); K9(TMT6plex) 1 O70310 Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 O70310 Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 0 3 3 0.4917 0 1 1 1 487.62735 1460.8675 1460.86594 1.07 0.00052 0/0 0 0 44087416 HCD 30 MS2 42.92037 1443.3 35.784 67.6647 20221 20221 20219 QEplus033719.raw F4 1457.1 1261.7 1601.9 1207 1507.6 1624.4 424 2.4 1 FALSE 0.0007436 0.01054 0.396 -250 97273 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVQSLDK [K].aVQSLDk.[N] N-Term(TMT6plex); K7(TMT6plex) 4 Q9CPW4 Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=1 SV=3 Q3TK56; Q9CPW4; Q3UC32; Q3TKM9 Actin-related protein 2/3 complex subunit 5 (Fragment) OS=Mus musculus OX=10090 GN=Arpc5 PE=2 SV=1; Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=1 SV=3; Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=2 SV=1; Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=2 SV=1 0 2 2 0.2906 0 1 1 1 609.87714 1218.747 1218.74581 0.97 0.00059 0/0 0 0 55287952 HCD 30 MS2 17.9748 1113.6 25.804 67.667 20222 20222 20219 QEplus033719.raw F4 1125.4 1103.1 1120.6 734.4 1636.5 961.7 553 2.65 1 FALSE 0.0002814 0.00577 0.484 -250 97283 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVCDIPPR [K].tAVcDIPPR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 9 Q7TMM9; P99024; P68372; Q9CWF2 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1 Q7TMM9; Q9D6F9; Q62363; Q80ZV2; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2 "Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Beta-tubulin gene M-beta-2, 3' end (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1" 0 2 2 0.6873 0 1 1 1 629.34534 1257.6834 1257.68227 0.89 0.00056 0/0 0 0 45898664 HCD 30 MS2 21.83344 804.5 39.046 67.6715 20224 20224 20219 QEplus033719.raw F4 783 713.7 882.6 650 951.9 845.5 232 2.75 4 FALSE 1.14E-05 5.44E-05 0.908 -250 97301 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFAEQTLR [K].kFAEQTLR.[Q] N-Term(TMT6plex); K1(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.5576 0 1 1 1 484.29831 1450.88037 1450.87822 1.49 0.00072 0/0 0 0 30928420 HCD 30 MS2 21.00291 1108 55.324 67.676 20226 20226 20219 QEplus033719.raw F4 1127.4 927.6 1221.9 1000 1111 1260.3 370 2.78 2 FALSE 5.44E-05 0.001971 0.6 -250 97306 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYSGQGVVK [R].dYSGQGVVk.[L] N-Term(TMT6plex); K9(TMT6plex) 8 O88342 WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3 Q3TNK2; O88342; Q9DC08; Q3TE06; Q3U136; A0A0J9YU05; Q9DBM8; Q80ZI9 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat domain 1 (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1 0 3 3 0.5495 0 1 1 1 470.93835 1410.80051 1410.7993 0.86 0.0004 0/0 0 0 28933210 HCD 30 MS2 54.32032 732 39.512 67.6783 20227 20227 20219 QEplus033719.raw F4 740.1 662.8 749.9 560.7 969.6 709 359 3.33 1 FALSE 1.14E-05 0.0005928 0.708 -250 97310 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAHSNLLAK [K].dAHSNLLAk.[K] N-Term(TMT6plex); K9(TMT6plex) 4 Q3TD78 NIPSNAP domain-containing protein OS=Mus musculus OX=10090 GN=Nipsnap2 PE=2 SV=1 Q3TD78; Q7TMG8; O55126; A0A0G2JEV1 NIPSNAP domain-containing protein OS=Mus musculus OX=10090 GN=Nipsnap2 PE=2 SV=1; Glioblastoma amplified sequence OS=Mus musculus OX=10090 GN=Nipsnap2 PE=1 SV=1; Protein NipSnap homolog 2 OS=Mus musculus OX=10090 GN=Nipsnap2 PE=1 SV=1; Protein NipSnap homolog 2 OS=Mus musculus OX=10090 GN=Nipsnap2 PE=1 SV=1 0 3 3 0.6798 0 1 1 1 476.28659 1426.84522 1426.84183 2.37 0.00113 0/0 0 0 24807350 HCD 30 MS2 35.59756 959.8 53.206 67.6805 20228 20228 20219 QEplus033719.raw F4 1090.7 641.8 955.9 1105.8 908.1 1056.4 315 4.31 1 FALSE 1.14E-05 2.42E-06 1.164 -250 97315 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTGEDPYPHK [K].vTGEDPYPHk.[F] N-Term(TMT6plex); K10(TMT6plex) 5 Q8CFK5 Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1 Q8CFK5; Q8C292; Q8C1V4; Q8R2P8; Q3TIV6 Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=1 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=1 SV=1 0 3 3 0.712 0 1 1 1 534.29688 1600.87607 1600.87353 1.59 0.00085 0/0 0 0 20193254 HCD 30 MS2 13.72143 953.7 93.524 67.6828 20229 20229 20219 QEplus033719.raw F4 919.6 790.6 1002.7 789.7 1162.9 1056.4 350 3.75 1 FALSE 1.14E-05 3.27E-05 0.95 -250 97320 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEGDIK [KN].vEGDIk.[G] N-Term(TMT6plex); K6(TMT6plex) 2 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 E9Q616; A0JLR7 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1 0 2 2 0.2333 0 1 1 1 559.84515 1118.68303 1118.68215 0.79 0.00044 0/0 0 0 229795616 HCD 30 MS2 18.32109 722.9 6.098 67.6901 20231 20231 20230 QEplus033719.raw F4 772.7 556.7 727.3 562.4 1042.3 676 309 1.8 1 FALSE 0.006298 0.1023 0 -250 97321 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEGDLK [KN].vEGDLk.[G] N-Term(TMT6plex); K6(TMT6plex) 5 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 A0PJF4; Q6UL10; E9Q616; A0JLR7; Q61484 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Desmoyokin (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1 0 2 2 0.2333 0 1 2 2 559.84515 1118.68303 1118.68215 0.79 0.00044 0/0 0 0 229795616 HCD 30 MS2 18.32109 722.9 6.098 67.6901 20231 20231 20230 QEplus033719.raw F4 772.7 556.7 727.3 562.4 1042.3 676 309 1.8 1 FALSE 0.006298 0.1023 0 -250 97330 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIHELEK [K].sIHELEk.[SI] N-Term(TMT6plex); K7(TMT6plex) 3 P13541; B2RY26 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1 P13541; B2RY26; B2RXX9 "Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1" 0 3 3 0.3949 0 1 1 1 438.59955 1313.78409 1313.78292 0.89 0.00039 0/0 0 0 34190900 HCD 30 MS2 19.10618 757.3 44.429 67.6924 20232 20232 20230 QEplus033719.raw F4 959 267.3 499.4 1972.1 376.8 469 337 3.95 2 FALSE 5.44E-05 0.002252 0.587 -250 97336 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CVEDPETGLR [R].cVEDPETGLR.[L] N-Term(TMT6plex); C1(Carbamidomethyl) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.6341 0 1 1 1 702.85382 1404.70036 1404.69905 0.94 0.00066 0/0 0 0 99215296 HCD 30 MS2 11.61697 546.8 15.778 67.6946 20233 20233 20230 QEplus033719.raw F4 620.4 480.3 569.1 461.3 588.6 561.4 134 3.99 2 FALSE 1.14E-05 7.37E-07 1.263 -250 97343 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGVVTDGVK [K].sGVVTDGVk.[H] N-Term(TMT6plex); K9(TMT6plex) 6 Q9DCW4 Electron transfer flavoprotein subunit beta OS=Mus musculus OX=10090 GN=Etfb PE=1 SV=3 A0A0N4SVE0; A0A0N4SWE9; A0A0U1RNK9; A0A0U1RNP5; A0A0U1RNR3; Q9DCW4 "Electron transfer flavoprotein subunit beta OS=Mus musculus OX=10090 GN=Etfbl PE=3 SV=1; Electron transferring flavoprotein, beta polypeptide-like OS=Mus musculus OX=10090 GN=Etfbl PE=4 SV=1; Electron transfer flavoprotein subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Etfb PE=1 SV=2; Electron transfer flavoprotein subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Etfb PE=3 SV=1; Electron transfer flavoprotein subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Etfb PE=4 SV=2; Electron transfer flavoprotein subunit beta OS=Mus musculus OX=10090 GN=Etfb PE=1 SV=3" 0 2 2 0.4921 0 1 1 1 660.40118 1319.79509 1319.79349 1.22 0.0008 0/0 0 0 29247998 HCD 30 MS2 18.67534 1333.5 59.866 67.6969 20234 20234 20230 QEplus033719.raw F4 1370.6 1126.9 1448.7 1272.8 1284.3 1497.6 447 3.15 1 FALSE 1.14E-05 5.18E-06 1.102 -250 97359 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVMPEVNR [K].dVMPEVNR.[V] N-Term(TMT6plex) 4 P06745 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4 Q3ZBD7; B2RXT5; P06745; B7ZWL9 SWISS-PROT:Q3ZBD7 (Bos taurus) Glucose-6-phosphate isomerase; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1 0 2 2 0.5257 0 1 1 1 594.81635 1188.62541 1188.62442 0.83 0.0005 0/0 0 0 22543232 HCD 30 MS2 57.74092 1240.1 51.058 67.7014 20236 20236 20230 QEplus033719.raw F4 1307.2 972.1 1352.9 1096.3 1325.5 1386.6 210 2.53 1 TRUE 4.43E-05 0.001623 0.618 -250 97365 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LNQQMAK [K].lNQQMAk.[M] N-Term(TMT6plex); K7(TMT6plex) 4 P14576 Signal recognition particle 54 kDa protein OS=Mus musculus OX=10090 GN=Srp54 PE=1 SV=2 Q8C1Y6; E9PXC0; P14576; Q99JZ9 Signal recognition particle 54 kDa protein OS=Mus musculus OX=10090 GN=Srp54c PE=2 SV=1; Signal recognition particle 54 kDa protein OS=Mus musculus OX=10090 GN=Srp54c PE=1 SV=1; Signal recognition particle 54 kDa protein OS=Mus musculus OX=10090 GN=Srp54 PE=1 SV=2; Signal recognition particle 54 kDa protein OS=Mus musculus OX=10090 GN=Srp54c PE=2 SV=1 0 2 2 0.3392 0 1 1 1 645.88306 1290.75884 1290.76041 -1.22 -0.00079 0/0 0 0 21773868 HCD 30 MS2 40.03334 1319.7 75.019 67.7037 20237 20237 20230 QEplus033719.raw F4 1315 1055.1 1379.6 1279.5 1415.1 1473.8 555 2.86 1 FALSE 0.0002518 0.005075 0.499 -250 97376 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CATITPDEK [K].cATITPDEk.[R] N-Term(TMT6plex); C1(Carbamidomethyl); K9(TMT6plex) 9 O88844 Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2 Q3TJ51; Q0QER9; O88844; Q5HZJ8; A0A087WPT4; A0A087WRS9; D3YVY3; Q8C338; A0A087WRM4 Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; IDP (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1 0 3 3 0.3966 0 1 1 1 498.27469 1492.80951 1492.80815 0.91 0.00045 0/0 0 0 12033517 HCD 30 MS2 51.25689 1276.2 110 67.7085 20239 20239 20230 QEplus033719.raw F4 1234 1053.5 1386.4 1337.2 1322.2 1324.1 344 2.9 1 FALSE 0.0002218 0.00466 0.51 -250 97384 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVTSSLK [R].tVTSSLk.[E] N-Term(TMT6plex); K7(TMT6plex) 1 Q8BH64 EH domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ehd2 PE=1 SV=1 Q8BH64 EH domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ehd2 PE=1 SV=1 0 2 2 0.5331 0 1 1 1 597.38104 1193.75481 1193.75056 3.56 0.00212 0/0 0 0 11296503 HCD 30 MS2 31.43943 1733 110 67.711 20240 20240 20230 QEplus033719.raw F4 1769.6 1816.4 1740.9 1113.5 2384 1573.5 110 2.72 1 FALSE 0.0015 0.02166 0.268 -250 97394 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FQGPDNGQGPK [K].fQGPDNGQGPk.[Y] N-Term(TMT6plex); K11(TMT6plex) 8 A0A498WGD8 Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=1 A0A498WGD8; Q3UNH3; A0A494BB31; A0A494B955; Q3UBF4; Q3U8R9; A0A494BBI1; Q8CDN6 Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=1; PITH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Txnl1 PE=2 SV=1; Thioredoxin-like protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=1; Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=1; PITH domain-containing protein OS=Mus musculus OX=10090 GN=Txnl1 PE=2 SV=1; PITH domain-containing protein OS=Mus musculus OX=10090 GN=Txnl1 PE=2 SV=1; Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=1; Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3 0 2 2 0.7728 0 1 1 1 801.93646 1602.86565 1602.86403 1.01 0.00081 0/0 0 0 11861570 HCD 30 MS2 0 525.2 110 67.7183 20242 20242 20241 QEplus033719.raw F4 554 485.3 578.9 401.9 583.4 547.9 341 4.27 1 FALSE 1.14E-05 1.18E-06 1.224 -250 97413 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIDIHEVR [K].dIDIHEVR.[I] N-Term(TMT6plex) 10 Q8C290 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1 Q8C290; Q8VEK3-2; Q3ULH5; Q3TVV6; Q3TXW2; Q3TGN5; O88568; Q3TWN5; Q3TS50; Q8VEK3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; B30.2/SPRY domain-containing protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Heterogenous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; B30.2/SPRY domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=1 SV=1 0 3 3 0.6264 0 1 1 1 409.22986 1225.67502 1225.67382 0.98 0.0004 0/0 0 0 116657320 HCD 30 MS2 13.23764 334.4 10.956 67.7231 20244 20244 20241 QEplus033719.raw F4 338 318.8 400.2 247.8 366 335.6 256 3.64 1 FALSE 1.14E-05 5.41E-05 0.908 -250 97430 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERFIEQEK [R].eRFIEQEk.[A] N-Term(TMT6plex); K8(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.5457 0 1 1 1 512.96448 1536.87888 1536.87861 0.17 0.00009 0/0 0 0 24624264 HCD 30 MS2 46.90934 1257.8 58.525 67.7276 20246 20246 20241 QEplus033719.raw F4 1322.6 1072.6 1360.7 1016.8 1444.4 1329.9 453 3.39 2 FALSE 0.0005076 0.008013 0.439 -250 97437 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EREEMWQK [K].eREEMWQk.[I] N-Term(TMT6plex); K8(TMT6plex) 7 Q91V89 Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit OS=Mus musculus OX=10090 GN=Ppp2r5d PE=1 SV=1 Q91V89; Q7TNL5; Q921X5; Q8K5D8; Q62305; Q62304; Q99PC9 Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit OS=Mus musculus OX=10090 GN=Ppp2r5d PE=1 SV=1; Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit OS=Mus musculus OX=10090 GN=Ppp2r5d PE=1 SV=1; Ppp2r5d protein (Fragment) OS=Mus musculus OX=10090 GN=Ppp2r5d PE=2 SV=1; Protein phosphatase 2a regulatory b56-delta subunit (Fragment) OS=Mus musculus OX=10090 GN=ppp2r5d PE=3 SV=1; Tex271 protein OS=Mus musculus OX=10090 GN=Ppp2r5d PE=2 SV=1; Tex271 protein (Fragment) OS=Mus musculus OX=10090 GN=Ppp2r5d PE=2 SV=1; Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit OS=Mus musculus OX=10090 GN=Ppp2r5d PE=2 SV=1 1 3 3 0.5936 0 1 1 1 531.95404 1593.84757 1593.84593 1.03 0.00055 0/0 0 0 15074831 HCD 30 MS2 46.9007 1440.2 83.332 67.7299 20247 20247 20241 QEplus033719.raw F4 1460.4 1384.3 1550.2 1068.9 1746.2 1431.3 317 3.42 1 FALSE 0.0003496 0.006788 0.462 -250 97448 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEGTYCCGPVSVR [K].sEGTYccGPVSVR.[A] N-Term(TMT6plex); C6(Carbamidomethyl); C7(Carbamidomethyl) 1 P21981 Protein-glutamine gamma-glutamyltransferase 2 OS=Mus musculus OX=10090 GN=Tgm2 PE=1 SV=4 P21981 Protein-glutamine gamma-glutamyltransferase 2 OS=Mus musculus OX=10090 GN=Tgm2 PE=1 SV=4 0 2 2 0.8004 0 1 1 1 850.9007 1700.79411 1700.79336 0.45 0.00038 0/0 0 0 8532747 HCD 30 MS2 0 329.2 110 67.7349 20249 20249 20241 QEplus033719.raw F4 282.3 252.9 374.1 488 190.3 387.7 55 5.06 1 FALSE 1.14E-05 5.47E-12 2.237 -250 97453 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRDQLGTAK [R].lRDQLGTAk.[N] N-Term(TMT6plex); K9(TMT6plex) 1 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 1 3 3 0.362 0 1 1 1 487.30603 1459.90354 1459.89968 2.64 0.00128 0/0 0 0 77720280 HCD 30 MS2 62.63531 1063.8 15.051 67.7372 20250 20250 20241 QEplus033719.raw F4 1132.3 879.3 1163.7 871.4 1160.4 1175.6 358 3.26 1 FALSE 1.14E-05 2.42E-05 0.974 -250 97462 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQQALVQK [K].aQQALVQk.[R] N-Term(TMT6plex); K8(TMT6plex) 4 Q3TJD4 ATP synthase subunit b OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1 Q3TJD4; Q9CQQ7; A0A0G2JGX3; Q3UF04 "ATP synthase subunit b OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1; ATP synthase F(0) complex subunit B1, mitochondrial OS=Mus musculus OX=10090 GN=Atp5pb PE=1 SV=1; ATP synthase subunit b (Fragment) OS=Mus musculus OX=10090 GN=Atp5pb PE=1 SV=1; ATP synthase subunit b OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1" 0 3 3 0.5593 0 1 1 1 448.61932 1343.84342 1343.84111 1.72 0.00077 0/0 0 0 38888488 HCD 30 MS2 49.16381 756.1 27.965 67.7394 20251 20251 20241 QEplus033719.raw F4 800.8 533.8 759.6 711.1 766.4 964.7 298 3.54 1 FALSE 4.43E-05 0.00166 0.616 -250 97471 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIDIHEVR [K].dIDIHEVR.[I] N-Term(TMT6plex) 10 Q8C290 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1 Q8C290; Q8VEK3-2; Q3ULH5; Q3TVV6; Q3TXW2; Q3TGN5; O88568; Q3TWN5; Q3TS50; Q8VEK3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; B30.2/SPRY domain-containing protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Heterogenous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; B30.2/SPRY domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=1 SV=1 0 2 2 0.6677 0 1 1 1 613.34094 1225.67461 1225.67382 0.65 0.0004 0/0 0 0 35655876 HCD 30 MS2 16.91061 1338.2 110 67.7493 20254 20254 20252 QEplus033719.raw F4 1306.1 1364.3 1518 921.2 1540.3 1379.5 263 3.19 1 FALSE 1.14E-05 7.51E-05 0.881 -250 97480 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIQSLPR [KR].dIQSLPR.[N] N-Term(TMT6plex) 9 Q3TGS1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ehd1 PE=2 SV=1 Q3TIT3; Q3TUW9; Q3TGS1; Q9QXY6; Q8R0V6; Q3T9A1; Q8K1X5; Q9WVK4; Q3TCK3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ehd1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ehd1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ehd1 PE=2 SV=1; EH domain-containing protein 3 OS=Mus musculus OX=10090 GN=Ehd3 PE=1 SV=2; Ehd3 protein (Fragment) OS=Mus musculus OX=10090 GN=Ehd3 PE=2 SV=1; Dynamin-type G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ehd1 PE=2 SV=1; EH-domain containing 1 (Fragment) OS=Mus musculus OX=10090 GN=Ehd1 PE=2 SV=2; EH domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ehd1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ehd1 PE=2 SV=1 0 2 2 0.437 0 1 1 1 529.31464 1057.622 1057.62032 1.58 0.00084 0/0 0 0 45987792 HCD 30 MS2 19.27329 720.5 29.933 67.7515 20255 20255 20252 QEplus033719.raw F4 741.5 621.2 734.7 614.6 830.3 780.9 297 2.54 1 FALSE 0.001074 0.01375 0.349 -250 97487 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LPDAYER [K].lPDAYER.[L] N-Term(TMT6plex) 2 Q790Y8 Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pdx PE=1 SV=1 Q790Y8; Q3TNL1 Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pdx PE=1 SV=1; Glucose-6-phosphate 1-dehydrogenase OS=Mus musculus OX=10090 GN=G6pdx PE=2 SV=1 0 2 2 0.1934 0 1 1 1 546.79852 1092.58977 1092.58869 0.99 0.00054 0/0 0 0 44265144 HCD 30 MS2 27.30546 912 32.261 67.7538 20256 20256 20252 QEplus033719.raw F4 944.5 872.4 959.2 677.1 1133.8 884.9 230 2.43 1 FALSE 0.0003408 0.00644 0.469 -250 97497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEIETVK [R].gEIETVk.[Q] N-Term(TMT6plex); K7(TMT6plex) 2 Q6PB66 "Leucine-rich PPR motif-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Lrpprc PE=1 SV=2" F6V2A3; Q6PB66 "Leucine-rich PPR motif-containing protein, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Lrpprc PE=1 SV=1; Leucine-rich PPR motif-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Lrpprc PE=1 SV=2" 0 2 2 0.2927 0 1 1 1 617.37726 1233.74724 1233.74547 1.43 0.00088 0/0 0 0 36187120 HCD 30 MS2 26.19234 1454.3 51.215 67.7561 20257 20257 20252 QEplus033719.raw F4 1599.2 983.2 1530.1 1464.8 1364.7 1783.8 461 2.46 1 FALSE 0.0006294 0.009635 0.41 -250 97507 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DFTGPSGK [K].dFTGPSGk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 Q99K41 EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1 Q99K41; Q3U254; Q3USG5 EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; C1q domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1 0 2 2 0.5357 0 1 1 1 633.85687 1266.70647 1266.70942 -2.33 -0.00148 0/0 0 0 15677114 HCD 30 MS2 13.32894 1462.8 110 67.7586 20258 20258 20252 QEplus033719.raw F4 1402.1 1377.5 1748.4 1295.1 1422.7 1531.2 341 2.8 1 FALSE 1.14E-05 0.0005093 0.721 -250 97526 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFAEQTLR [K].kFAEQTLR.[Q] N-Term(TMT6plex); K1(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.5839 0 1 1 1 725.94415 1450.88103 1450.87822 1.94 0.0014 0/0 0 0 5955012.5 HCD 30 MS2 14.59398 449.4 110 67.7661 20261 20261 20252 QEplus033719.raw F4 442.7 360.4 493.4 413.7 489.3 497.1 370 2.98 2 FALSE 0.0007151 0.01037 0.398 -250 97532 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YQGLQQQEAK [K].yQGLQQQEAk.[S] N-Term(TMT6plex); K10(TMT6plex) 3 Q8BL66 Early endosome antigen 1 OS=Mus musculus OX=10090 GN=Eea1 PE=1 SV=2 Q8BL66; Q05CS7; Q3TQY5 Early endosome antigen 1 OS=Mus musculus OX=10090 GN=Eea1 PE=1 SV=2; Eea1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eea1 PE=2 SV=1; C2H2-type domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eea1 PE=2 SV=1 0 2 2 0.6135 0 1 1 1 825.96558 1650.92388 1650.92154 1.41 0.00117 0/0 0 0 2231279.75 HCD 30 MS2 0 234.4 110 67.7686 20262 20262 20252 QEplus033719.raw F4 234.7 205.5 272.7 187.3 256.9 249 461 5.02 1 FALSE 1.14E-05 2.56E-09 1.73 -250 97543 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEVAAGDHPTDAEMK [K].aEVAAGDHPTDAEMk.[G] N-Term(TMT6plex); K15(TMT6plex) 2 P30416 Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=5 Q8CBS1; P30416 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Fkbp4 PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=5 0 3 3 0.6948 0 1 1 1 667.34436 2000.01853 2000.01591 1.31 0.00087 0/0 0 0 16476487 HCD 30 MS2 15.74063 681.1 110 67.7784 20265 20265 20263 QEplus033719.raw F4 618.3 631.5 539.9 732.4 1095.2 469.3 253 4.85 1 FALSE 1.14E-05 2.03E-15 2.888 -250 97550 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FHVEEEGK [R].fHVEEEGk.[G] N-Term(TMT6plex); K8(TMT6plex) 3 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 P09041; P09411; S4R2M7 Phosphoglycerate kinase 2 OS=Mus musculus OX=10090 GN=Pgk2 PE=1 SV=4; Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4; Phosphoglycerate kinase OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=1 0 3 3 0.6556 0 1 1 1 478.26675 1432.78571 1432.78365 1.44 0.00069 0/0 0 0 80196248 HCD 30 MS2 5.618392 719.7 21.055 67.7807 20266 20266 20263 QEplus033719.raw F4 875 562 693.8 696.7 742.3 748.5 331 3.92 1 FALSE 1.14E-05 6.41E-07 1.274 -250 97553 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLGEEK [R].vLGEEk.[M] N-Term(TMT6plex); K6(TMT6plex) 6 Q9DBH1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubtf PE=2 SV=1 Q9DBH1; A2AWT7; P25976; A2AWT6; P25976-2; A2AWT5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubtf PE=2 SV=1; Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf PE=1 SV=1; Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf PE=1 SV=1; Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf PE=1 SV=1; Isoform UBF2 of Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf; Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf PE=1 SV=1 0 2 2 0.1625 0 1 1 1 566.85297 1132.69866 1132.6978 0.76 0.00043 0/0 0 0 34284760 HCD 30 MS2 10.57356 1094.7 42.847 67.783 20267 20267 20263 QEplus033719.raw F4 1098.5 1035.1 1109.4 761.1 1572.6 991.8 319 2.4 1 FALSE 0.003321 0.06447 0.102 -250 97563 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VMGAELR [K].vMGAELR.[H] N-Term(TMT6plex) 1 Q8CI43 Myosin light chain 6B OS=Mus musculus OX=10090 GN=Myl6b PE=1 SV=1 Q8CI43 Myosin light chain 6B OS=Mus musculus OX=10090 GN=Myl6b PE=1 SV=1 0 2 2 0.2912 0 1 1 1 502.79211 1004.57695 1004.57602 0.93 0.00047 0/0 0 0 18803622 HCD 30 MS2 36.53439 1179.6 49.387 67.7875 20269 20269 20263 QEplus033719.raw F4 1401.9 553.1 1085.2 1695.8 796.3 1545.4 300 2.61 1 FALSE 0.0001603 0.003831 0.532 -250 97573 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AFEDEMSGR [R].aFEDEMSGR.[S] N-Term(TMT6plex) 4 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q62261; A0A0A0MQG2; Q5DTR4; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; MKIAA4049 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 2 2 0.7105 0 1 1 1 635.7998 1270.59233 1270.59352 -0.93 -0.00059 0/0 0 0 15604344 HCD 30 MS2 10.89184 1182.1 110 67.79 20270 20270 20263 QEplus033719.raw F4 1167.4 949.8 1413.8 1036.3 1126.2 1399.3 43 3.04 2 FALSE 1.14E-05 0.0001683 0.814 -250 97590 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FHVEEEGK [R].fHVEEEGk.[G] N-Term(TMT6plex); K8(TMT6plex) 3 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 P09041; P09411; S4R2M7 Phosphoglycerate kinase 2 OS=Mus musculus OX=10090 GN=Pgk2 PE=1 SV=4; Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4; Phosphoglycerate kinase OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=1 0 2 2 0.5338 0 1 1 1 716.89697 1432.78667 1432.78365 2.11 0.00151 0/0 0 0 5170273 HCD 30 MS2 15.98082 555.6 110 67.7948 20272 20272 20263 QEplus033719.raw F4 645.8 446.1 548.5 588.2 511.3 593.4 360 3.11 1 FALSE 3.35E-05 0.001138 0.651 -250 97604 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQVAAEVAK [K].nQVAAEVAk.[L] N-Term(TMT6plex); K9(TMT6plex) 3 Q68FL6 "Methionine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Mars1 PE=1 SV=1" F6W0G8; E9QB02; Q68FL6 "Methionine--tRNA ligase, cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Mars1 PE=1 SV=2; Methionine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Mars1 PE=1 SV=1; Methionine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Mars1 PE=1 SV=1" 0 2 2 0.534 0 1 1 1 694.41986 1387.83245 1387.83094 1.09 0.00075 0/0 0 0 23048416 HCD 30 MS2 0 882.8 110 67.8044 20275 20275 20274 QEplus033719.raw F4 933.9 690.5 977.9 785.1 876.1 1033 520 3.97 1 FALSE 1.14E-05 6.91E-07 1.268 -250 97608 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLTDADAMK [K].rLTDADAMk.[Y] N-Term(TMT6plex); K9(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 1 3 3 0.5698 0 1 1 1 493.61896 1478.84232 1478.84012 1.49 0.00073 0/0 0 0 19907396 HCD 30 MS2 31.35905 884 61.004 67.8067 20276 20276 20274 QEplus033719.raw F4 1044.4 555.3 834.7 977.9 792.6 1099.3 450 4.3 1 FALSE 1.14E-05 5.53E-07 1.286 -250 97621 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MMNTDLSR [K].mMNTDLSR.[I] N-Term(TMT6plex) 3 Q9D8E6 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3 Q9D8E6; Q5ZEY2; Q9CSM5 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3; Ribosomal protein L4 (Fragment) OS=Mus musculus OX=10090 GN=Rpl4 PE=2 SV=1; 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=2 SV=2 0 2 2 0.5483 0 1 1 1 598.80255 1196.59783 1196.59649 1.11 0.00067 0/0 0 0 65712996 HCD 30 MS2 19.69319 905.2 22.623 67.8112 20278 20278 20274 QEplus033719.raw F4 836.2 869.3 1047.3 704.4 981.1 992.9 99 2.9 1 FALSE 0.0001603 0.003678 0.536 -250 97626 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTAGLTR [R].lTAGLTR.[G] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.148 0 1 1 1 480.80612 960.60497 960.60395 1.06 0.00051 0/0 0 0 59422308 HCD 30 MS2 15.88664 972.5 18.411 67.8135 20279 20279 20274 QEplus033719.raw F4 990.3 759.5 1087.3 1098.8 663.5 1235.5 42 2.23 3 FALSE 0.001275 0.0174 0.306 -250 97636 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVDYDSAR [K].lVDYDSAR.[H] N-Term(TMT6plex) 15 A0A3Q4EBK4 Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1 A0A668KM31; Q6P1B9; O08539-2; S4R2J8; S4R1B8; C6EQG9; A0A3Q4EBK4; D3Z6Q9; A0A5F8MQ05; A0A0G2JEG8; S4R270; A0A3Q4EBR8; O08539; Q7TQF7; Q8BXH2 Amphiphysin OS=Mus musculus OX=10090 GN=Amph PE=1 SV=1; Bin1 protein OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Isoform 2 of Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1; Bridging integrator 2 OS=Mus musculus OX=10090 GN=Bin2 PE=1 SV=1; Bridging integrator 2 OS=Mus musculus OX=10090 GN=Bin2 PE=1 SV=1; ASL1/Amph fusion protein OS=Mus musculus OX=10090 PE=2 SV=1; Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Bridging integrator 2 OS=Mus musculus OX=10090 GN=Bin2 PE=1 SV=1; Bridging integrator 2 OS=Mus musculus OX=10090 GN=Bin2 PE=1 SV=1; Amphiphysin OS=Mus musculus OX=10090 GN=Amph PE=1 SV=1; Bridging integrator 2 OS=Mus musculus OX=10090 GN=Bin2 PE=1 SV=1; Myc box-dependent-interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Amphiphysin OS=Mus musculus OX=10090 GN=Amph PE=1 SV=1; BAR domain-containing protein OS=Mus musculus OX=10090 GN=Amph PE=2 SV=1 0 2 2 0.6757 0 1 1 1 584.31348 1167.61968 1167.62072 -0.89 -0.00052 0/0 0 0 42989564 HCD 30 MS2 24.8836 1040.7 23.586 67.8157 20280 20280 20274 QEplus033719.raw F4 1086.9 683.4 1115.6 1223.1 808.3 1327.1 109 2.96 1 FALSE 0.0001504 0.003457 0.543 -250 97642 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAHFLAK [R].gAHFLAk.[S] N-Term(TMT6plex); K7(TMT6plex) 1 P00375 Dihydrofolate reductase OS=Mus musculus OX=10090 GN=Dhfr PE=1 SV=3 P00375 Dihydrofolate reductase OS=Mus musculus OX=10090 GN=Dhfr PE=1 SV=3 0 3 3 0.4554 0 1 1 1 401.25415 1201.7479 1201.74575 1.79 0.00072 0/0 0 0 22805750 HCD 30 MS2 55.19151 744.5 47.359 67.818 20281 20281 20274 QEplus033719.raw F4 721.1 781.2 791.2 453.5 1028.1 692 301 3.14 1 FALSE 0.001083 0.01406 0.345 -250 97646 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THSITFK [K].tHSITFk.[D] N-Term(TMT6plex); K7(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; Q3TZL3; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.7158 0 1 1 1 431.26434 1291.77848 1291.77744 0.8 0.00034 0/0 0 0 22201446 HCD 30 MS2 19.5914 758.8 53.694 67.8203 20282 20282 20274 QEplus033719.raw F4 839.6 397.6 678.3 1088.9 499 1049.4 391 3.66 2 FALSE 0.00124 0.01676 0.312 -250 97663 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADAEVLRK [R].aDAEVLRk.[A] N-Term(TMT6plex); K8(TMT6plex) 2 P48036 Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 A0A0G2JGQ0; P48036 Annexin A5 (Fragment) OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1; Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 1 3 3 0.2347 0 1 1 1 453.95047 1359.83686 1359.83602 0.61 0.00028 0/0 0 0 16014547 HCD 30 MS2 54.1799 1142.9 58.649 67.8248 20284 20284 20274 QEplus033719.raw F4 1292.6 985 1112.5 1258.1 1082.3 1126.8 554 2.77 1 FALSE 0.001169 0.01571 0.324 -250 97694 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAINEVVTR [R].sAINEVVTR.[E] N-Term(TMT6plex) 5 P62900 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1 P62900; Q9CY93; A0A0A6YXL3; A0A0A6YX26; Q58DZ1 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=2 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1; Rpl31 protein OS=Mus musculus OX=10090 GN=Rpl31 PE=2 SV=1 0 2 2 0.4904 0 1 1 1 609.35651 1217.70574 1217.70512 0.51 0.00031 0/0 0 0 51695976 HCD 30 MS2 55.93341 813.5 22.176 67.8411 20290 20290 20285 QEplus033719.raw F4 825 740.7 913.4 634.7 915.6 851.8 380 3.14 1 FALSE 1.14E-05 1.83E-06 1.188 -250 97710 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FGQGGAGPVGGQGPR [R].fGQGGAGPVGGQGPR.[G] N-Term(TMT6plex) 3 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q810V5; Q8VIJ6; Q7TMH7 "Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1; Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1" 0 3 3 0.7311 0 1 1 1 524.28192 1570.83121 1570.82875 1.56 0.00082 0/0 0 0 36241660 HCD 30 MS2 60.61775 876.8 29.067 67.8456 20292 20292 20285 QEplus033719.raw F4 909.3 731 961.3 775.3 1000.5 883.3 264 5.17 1 FALSE 1.14E-05 1.17E-09 1.794 -250 97732 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YPEAPPSVR [K].yPEAPPSVR.[F] N-Term(TMT6plex) 6 E9PY39; Q9D2M8 Predicted gene 20431 OS=Mus musculus OX=10090 GN=Gm20431 PE=3 SV=1;Ubiquitin-conjugating enzyme E2 variant 2 OS=Mus musculus OX=10090 GN=Ube2v2 PE=1 SV=4 E9PY39; Q9D2M8; B7ZBY6; A6X925; Q569Y6; B7ZBY7 Predicted gene 20431 OS=Mus musculus OX=10090 GN=Gm20431 PE=3 SV=1; Ubiquitin-conjugating enzyme E2 variant 2 OS=Mus musculus OX=10090 GN=Ube2v2 PE=1 SV=4; Ubiquitin-conjugating enzyme E2 variant 1 (Fragment) OS=Mus musculus OX=10090 GN=Ube2v1 PE=4 SV=8; Ubiquitin-conjugating enzyme E2 variant 2 OS=Mus musculus OX=10090 GN=Ube2v2 PE=1 SV=1; Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus musculus OX=10090 GN=Ube2v1 PE=2 SV=1; Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus musculus OX=10090 GN=Ube2v1 PE=4 SV=1 0 2 2 0.5744 0 1 1 1 622.84784 1244.6884 1244.68365 3.82 0.00237 0/0 0 0 24960952 HCD 30 MS2 10.27958 969.9 39.26 67.8524 20295 20295 20285 QEplus033719.raw F4 892.9 814.9 1203.8 855.8 963.4 1088.6 333 2.42 2 FALSE 4.43E-05 0.001537 0.623 -250 97740 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADGIVSK [K].aDGIVSk.[N-] N-Term(TMT6plex); K7(TMT6plex) 2 Q9CQR2 40S ribosomal protein S21 OS=Mus musculus OX=10090 GN=Rps21 PE=1 SV=1 Q9CQR2; Q8C1L7 40S ribosomal protein S21 OS=Mus musculus OX=10090 GN=Rps21 PE=1 SV=1; 40S ribosomal protein S21 OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.4303 0 1 1 1 574.35846 1147.70964 1147.70869 0.83 0.00047 0/0 0 0 246759600 HCD 30 MS2 9.105587 863.9 4.626 67.8597 20297 20297 20296 QEplus033719.raw F4 892.7 658.7 858.7 726.7 1162 884.3 425 2.51 1 FALSE 0.001266 0.01729 0.307 -250 97748 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLADTK [K].vLADTk.[E] N-Term(TMT6plex); K6(TMT6plex) 3 Q9DBG5 Perilipin-3 OS=Mus musculus OX=10090 GN=Plin3 PE=1 SV=1 Q9DBG5; A0A3B2WCW2; Q2XSQ4 Perilipin-3 OS=Mus musculus OX=10090 GN=Plin3 PE=1 SV=1; Perilipin-3 (Fragment) OS=Mus musculus OX=10090 GN=Plin3 PE=1 SV=1; Perilipin OS=Mus musculus OX=10090 GN=Plin3 PE=2 SV=1 0 2 2 0.0651 0 1 1 1 552.85535 1104.70342 1104.70288 0.48 0.00027 0/0 0 0 25828158 HCD 30 MS2 40.89155 1068.6 31.713 67.862 20298 20298 20296 QEplus033719.raw F4 1107.7 894.9 1167.7 972.6 1201.8 1067 199 2.15 1 FALSE 0.003651 0.06979 0.088 -250 97772 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AITSAYYR [R].aITSAYYR.[G] N-Term(TMT6plex) 11 Q78ZJ8 RAB11B protein OS=Mus musculus OX=10090 GN=Rab11b PE=1 SV=1 Q78ZJ8; E9Q3P9; G3UY29; Q0PD45; D3YYB3; A0A068BFR3; Q3UZ37; G3UZD3; G3UZL4; Q9WTL2; F8WGS1 RAB11B protein OS=Mus musculus OX=10090 GN=Rab11b PE=1 SV=1; Ras-related protein Rab-11A OS=Mus musculus OX=10090 GN=Rab11a PE=4 SV=1; Ras-related protein Rab-11B OS=Mus musculus OX=10090 GN=Rab11b PE=4 SV=1; Rab11A OS=Mus musculus OX=10090 GN=Rab11a PE=1 SV=1; Ras-related protein Rab-25 (Fragment) OS=Mus musculus OX=10090 GN=Rab25 PE=1 SV=1; RAS oncogene family protein OS=Mus musculus OX=10090 GN=Rab11b PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab11b PE=2 SV=1; Ras-related protein Rab-11B OS=Mus musculus OX=10090 GN=Rab11b PE=1 SV=1; Ras-related protein Rab-11B (Fragment) OS=Mus musculus OX=10090 GN=Rab11b PE=1 SV=1; Ras-related protein Rab-25 OS=Mus musculus OX=10090 GN=Rab25 PE=1 SV=2; Ras-related protein Rab-11A (Fragment) OS=Mus musculus OX=10090 GN=Rab11a PE=4 SV=1 0 2 2 0.6448 0 1 1 1 587.32495 1173.64263 1173.64654 -3.33 -0.00196 0/0 0 0 25682708 HCD 30 MS2 41.05202 916.2 28.304 67.8688 20301 20301 20296 QEplus033719.raw F4 900.6 747.5 1034.3 733.8 1111.7 969.1 286 2.59 1 FALSE 2.26E-05 0.001047 0.658 -250 97784 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAMENDDGRTEEEK [R].iAMENDDGRTEEEk.[H] N-Term(TMT6plex); K14(TMT6plex) 7 Q7TQH0 Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1 Q7TQH0-3; Q7TQH0; Q7TQH0-2; E9Q5Q0; Q3TGG2; Q3TYH7; A0A0U1RPL0 Isoform 3 of Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l; Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1; Isoform 2 of Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l; Ataxin-2-like protein (Fragment) OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=2; Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1; LsmAD domain-containing protein OS=Mus musculus OX=10090 GN=Atxn2l PE=2 SV=1; Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1 1 3 3 0.7178 0 1 1 1 699.01813 2095.03983 2095.03777 0.98 0.00069 0/0 0 0 7865212.5 HCD 30 MS2 0 561 110 67.8736 20303 20303 20296 QEplus033719.raw F4 574.1 494.2 618.5 449.3 648.4 581.7 207 4.5 1 FALSE 1.14E-05 1.72E-10 1.952 -250 97790 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSLLSPK [RK].rSLLSPk.[KG] N-Term(TMT6plex); K7(TMT6plex) 5 Q3TJZ6 Protein FAM98A OS=Mus musculus OX=10090 GN=Fam98a PE=1 SV=1 P59110; Q3TJZ6; A0A3Q4EBV4; Q8BL36; M0QWX4 Sentrin-specific protease 1 OS=Mus musculus OX=10090 GN=Senp1 PE=1 SV=1; Protein FAM98A OS=Mus musculus OX=10090 GN=Fam98a PE=1 SV=1; Protein FAM98A OS=Mus musculus OX=10090 GN=Fam98a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fam98a PE=2 SV=1; Sentrin-specific protease 1 OS=Mus musculus OX=10090 GN=Senp1 PE=1 SV=1 1 3 3 0.1152 0 1 1 1 420.27972 1258.82462 1258.82473 -0.09 -0.00004 0/0 0 0 6722003 HCD 30 MS2 64.17203 987.9 110 67.876 20304 20304 20296 QEplus033719.raw F4 986.3 761.7 1131.7 789 1087 1171.8 416 2.69 1 FALSE 0.0007246 0.01045 0.397 -250 97799 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDAAPAASDSKPSSAEPAPSSK [K].sDAAPAASDSkPSSAEPAPSSk.[E] N-Term(TMT6plex); K11(TMT6plex); K22(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 0 4 4 0.7518 0 1 1 1 687.11914 2745.45473 2745.45098 1.37 0.00094 0/0 0 0 28183366 HCD 30 MS2 3.695525 648.3 110 67.8786 20305 20305 20296 QEplus033719.raw F4 609.7 670.8 795.9 490.9 661.8 660.7 429 5.64 1 FALSE 1.14E-05 3.95E-13 2.453 -250 97807 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDAAPAASDSKPSSAEPAPSSK [K].sDAAPAASDSkPSSAEPAPSSk.[E] N-Term(TMT6plex); K11(TMT6plex); K22(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 0 3 3 0.7422 0 1 1 1 915.82336 2745.45554 2745.45098 1.66 0.00152 0/0 0 0 15314208 HCD 30 MS2 0 593.4 110 67.8811 20306 20306 20296 QEplus033719.raw F4 556.4 610.8 765.2 453.2 589.1 585.9 423 5.12 1 FALSE 1.14E-05 6.31E-16 3.489 -250 97830 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CLALATR [R].cLALATR.[D] N-Term(TMT6plex); C1(Carbamidomethyl) 9 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 E9Q559; B1ATS5; Q64518-3; Q64518; Q8C213; Q64518-1; B1ATS4; Q3U1K2; Q8R429 Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=1; Isoform SERCA3C of Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus OX=10090 GN=Atp2a3; Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=4; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a3 PE=2 SV=1; Isoform SERCA3B of Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus OX=10090 GN=Atp2a3; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=1; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a3 PE=2 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 0 2 2 0.5 0 1 1 1 517.3056 1033.60393 1033.60257 1.32 0.00068 0/0 0 0 152037392 HCD 30 MS2 36.25749 700.9 5.405 67.8952 20311 20311 20307 QEplus033719.raw F4 758.9 308.9 594.3 1086.7 464.3 992.1 243 2.38 1 FALSE 0.0007056 0.01026 0.4 -250 97836 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVVFGK [K].hVVFGk.[VI] N-Term(TMT6plex); K6(TMT6plex) 12 P24369; Q3UAJ1; Q3UWH9; P30412 Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus OX=10090 GN=Ppib PE=1 SV=2;Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1;Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1;Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus OX=10090 GN=Ppic PE=1 SV=1 P24369; Q3TE63; Q3UAJ1; Q3UWH9; P30412; Q5SVY2; Q9CZK9; Q9D868; A0A1L1SST0; Q4G0C5; A2BGI8; Q3UY37 Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus OX=10090 GN=Ppib PE=1 SV=2; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus OX=10090 GN=Ppic PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase (Fragment) OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1 0 3 3 0.8053 0 1 1 1 382.24667 1144.72547 1144.72429 1.03 0.00039 0/0 0 0 145639664 HCD 30 MS2 26.89969 683.2 5.058 67.8974 20312 20312 20307 QEplus033719.raw F4 757.5 607.9 753.2 499 804.1 677.7 239 2.26 4 FALSE 0.003431 0.06633 0.097 -250 97846 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHLENNPALEK [R].gHLENNPALEk.[LM] N-Term(TMT6plex); K11(TMT6plex) 5 Q5M8R8 60S acidic ribosomal protein P0 OS=Mus musculus OX=10090 GN=Rplp0 PE=2 SV=1 Q5FWB6; O89073; Q5M8R8; D3YVM5; S4R1N1 60S acidic ribosomal protein P0 OS=Mus musculus OX=10090 GN=Rplp0 PE=2 SV=1; 60S acidic ribosomal protein P0 (Fragment) OS=Mus musculus OX=10090 GN=Rplp0 PE=2 SV=1; 60S acidic ribosomal protein P0 OS=Mus musculus OX=10090 GN=Rplp0 PE=2 SV=1; 60S acidic ribosomal protein P0 (Fragment) OS=Mus musculus OX=10090 GN=Rplp0 PE=1 SV=1; 60S acidic ribosomal protein P0 (Fragment) OS=Mus musculus OX=10090 GN=Rplp0 PE=1 SV=1 0 3 3 0.7344 0 1 1 1 560.65472 1679.94962 1679.94809 0.91 0.00051 0/0 0 0 90686136 HCD 30 MS2 46.41515 750.3 12.83 67.9019 20314 20314 20307 QEplus033719.raw F4 851.1 564.8 817.2 613.3 765.3 890 445 5.12 1 FALSE 1.14E-05 1.72E-09 1.762 -250 97853 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDIAGR [R].iDIAGR.[D] N-Term(TMT6plex) 2 P61164 Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1 P61164; A0A494BB86 Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1; Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1 0 2 2 0.3919 0 1 1 1 437.27194 873.53661 873.53553 1.23 0.00054 0/0 0 0 88767656 HCD 30 MS2 7.108295 1005.1 15.749 67.9042 20315 20315 20307 QEplus033719.raw F4 1064.4 921.7 1116.6 796.8 1018.8 1112.6 114 2.22 1 FALSE 0.00611 0.1002 0.006 -250 97854 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDIAGR [R].lDIAGR.[D] N-Term(TMT6plex) 2 Q5SW83 Uncharacterized protein OS=Mus musculus OX=10090 GN=Actr2 PE=1 SV=1 Q5SW83; Q8BMA4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Actr2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.3919 0 1 2 2 437.27194 873.53661 873.53553 1.23 0.00054 0/0 0 0 88767656 HCD 30 MS2 7.108295 1005.1 15.749 67.9042 20315 20315 20307 QEplus033719.raw F4 1064.4 921.7 1116.6 796.8 1018.8 1112.6 114 2.22 1 FALSE 0.00611 0.1002 0.006 -250 97855 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDLAGR [R].lDLAGR.[D] N-Term(TMT6plex) 39 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61275; Q3UAF6; Q3UD81; Q3U122; E9Q1F2; Q3UAA9; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; Q3UAF7; G3UZ07; Q3TIJ9; P62737; P68134; Q61276; Q3UBP6; D3YZY0; A0A0U1RQ96; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=3 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 0 2 2 0.3919 0 1 3 3 437.27194 873.53661 873.53553 1.23 0.00054 0/0 0 0 88767656 HCD 30 MS2 7.108295 1005.1 15.749 67.9042 20315 20315 20307 QEplus033719.raw F4 1064.4 921.7 1116.6 796.8 1018.8 1112.6 114 2.22 4 FALSE 0.00611 0.1002 0.006 -250 97863 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YPEAPPSVR [K].yPEAPPSVR.[F] N-Term(TMT6plex) 6 E9PY39; Q9D2M8 Predicted gene 20431 OS=Mus musculus OX=10090 GN=Gm20431 PE=3 SV=1;Ubiquitin-conjugating enzyme E2 variant 2 OS=Mus musculus OX=10090 GN=Ube2v2 PE=1 SV=4 E9PY39; Q9D2M8; B7ZBY6; A6X925; Q569Y6; B7ZBY7 Predicted gene 20431 OS=Mus musculus OX=10090 GN=Gm20431 PE=3 SV=1; Ubiquitin-conjugating enzyme E2 variant 2 OS=Mus musculus OX=10090 GN=Ube2v2 PE=1 SV=4; Ubiquitin-conjugating enzyme E2 variant 1 (Fragment) OS=Mus musculus OX=10090 GN=Ube2v1 PE=4 SV=8; Ubiquitin-conjugating enzyme E2 variant 2 OS=Mus musculus OX=10090 GN=Ube2v2 PE=1 SV=1; Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus musculus OX=10090 GN=Ube2v1 PE=2 SV=1; Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus musculus OX=10090 GN=Ube2v1 PE=4 SV=1 0 2 2 0.6705 0 1 1 1 622.84369 1244.6801 1244.68365 -2.85 -0.00178 0/0 0 0 27916236 HCD 30 MS2 10.05002 822.2 46.357 67.9065 20316 20316 20307 QEplus033719.raw F4 786.4 681.3 974.4 734.8 798.4 958 304 2.61 2 FALSE 0.0005556 0.008386 0.432 -250 97868 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FLQDHK [K].fLQDHk.[E] N-Term(TMT6plex); K6(TMT6plex) 16 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 F6XCT0; Q9QXZ0-3; B1ARU4; F6SHS0; E9QA63; E9QNP1; Q5DTZ2; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8 Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; MKIAA1251 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 3 3 0.2427 0 1 1 1 415.91714 1245.73688 1245.73558 1.05 0.00043 0/0 0 0 25686884 HCD 30 MS2 69.42023 640.8 13.176 67.9087 20317 20317 20307 QEplus033719.raw F4 546.5 485.9 757.8 631.1 542.3 881 426 2.39 3 FALSE 0.004228 0.0775 0.068 -250 97886 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLTHSLNIR [K].kLTHSLNIR.[N] N-Term(TMT6plex); K1(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 1 4 4 0.6065 0 1 1 1 385.74826 1539.97121 1539.97352 -1.5 -0.00058 0/0 0 0 11432234 HCD 30 MS2 58.87392 789.4 93.791 67.9182 20320 20320 20318 QEplus033719.raw F4 797.9 454.1 878.1 741 555.9 1309.2 148 4.32 2 FALSE 2.26E-05 0.001043 0.658 -250 97907 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SATLFSR [K].sATLFSR.[H] N-Term(TMT6plex) 4 Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1;ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TED3; Q3UEA1; Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate (pro-S-)-lyase (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 0 2 2 0.4346 0 1 1 1 505.79578 1010.58428 1010.58321 1.05 0.00053 0/0 0 0 67412504 HCD 30 MS2 33.34991 754.8 12.761 67.925 20323 20323 20318 QEplus033719.raw F4 748.1 679.4 877.5 610.4 812.5 800.6 53 2.37 2 FALSE 0.002242 0.04346 0.162 -250 97917 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETELAPAK [K].eTELAPAk.[G] N-Term(TMT6plex); K8(TMT6plex) 3 P27546 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 P27546; P27546-2; P27546-3 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 0 2 2 0.5364 0 1 1 1 658.89575 1316.78423 1316.78259 1.24 0.00082 0/0 0 0 39922632 HCD 30 MS2 5.699565 905.4 46.284 67.9273 20324 20324 20318 QEplus033719.raw F4 911.4 755.1 939.6 769 1144.5 913 440 3.02 1 FALSE 1.14E-05 0.0002762 0.772 -250 97933 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVTDEK [K].lVTDEk.[V] N-Term(TMT6plex); K6(TMT6plex) 4 Q9D358 Low molecular weight phosphotyrosine protein phosphatase OS=Mus musculus OX=10090 GN=Acp1 PE=1 SV=3 A0A1W2P7X3; Q561M1; Q9D358-2; Q9D358 Acid phosphatase OS=Mus musculus OX=10090 GN=Acp1 PE=1 SV=1; Low molecular weight cytosolic acid phosphatase OS=Mus musculus OX=10090 GN=Acp1 PE=1 SV=1; Isoform 2 of Low molecular weight phosphotyrosine protein phosphatase OS=Mus musculus OX=10090 GN=Acp1; Low molecular weight phosphotyrosine protein phosphatase OS=Mus musculus OX=10090 GN=Acp1 PE=1 SV=3 0 2 2 0.2681 0 1 1 1 581.85852 1162.70976 1162.70836 1.21 0.0007 0/0 0 0 26839240 HCD 30 MS2 4.432291 1788.8 110 67.932 20326 20326 20318 QEplus033719.raw F4 1924.3 1604.9 1741 1501.4 2252.9 1708.1 322 2.35 1 FALSE 0.004214 0.07725 0.069 -250 97943 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AINEAYK [R].aINEAYk.[E] N-Term(TMT6plex); K7(TMT6plex) 7 P14824; Q99JX6 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3;Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 Q3V2Z4; P14824; F8WIT2; Q3UI56; Q3TUI1; Q99JX6; Q3UDK4 Annexin OS=Mus musculus OX=10090 PE=2 SV=1; Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 0 2 2 0.3841 0 1 1 1 633.88043 1266.75359 1266.74581 6.14 0.00389 0/0 0 0 22595058 HCD 30 MS2 32.34464 1396.3 61.748 67.9343 20327 20327 20318 QEplus033719.raw F4 1560.3 1071.8 1511.7 1196.2 1551.7 1486.1 324 2.89 2 FALSE 0.001335 0.01858 0.294 -250 97950 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VPVGDQPK [K].vPVGDQPk.[D] N-Term(TMT6plex); K8(TMT6plex) 8 E9PUD2 Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1 E9PUD2; Q8K1M6-3; A0A2U3TZ67; Q8K1M6-4; Q8K1M6; Q8K1M6-5; Q8K1M6-2; Q3U4P3 Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1; Isoform 3 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1; Isoform 4 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=2; Isoform 5 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Isoform 2 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein (Fragment) OS=Mus musculus OX=10090 GN=Dnm1l PE=2 SV=1 0 2 2 0.6328 0 1 1 1 649.39899 1297.7907 1297.78801 2.07 0.00134 0/0 0 0 11905215 HCD 30 MS2 9.341632 688 110 67.9368 20328 20328 20318 QEplus033719.raw F4 730.4 535.9 745.4 623.9 685.5 806.9 202 3.05 1 FALSE 1.14E-05 0.0001353 0.832 -250 97956 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHLENNPALEK [R].gHLENNPALEk.[LM] N-Term(TMT6plex); K11(TMT6plex) 5 Q5M8R8 60S acidic ribosomal protein P0 OS=Mus musculus OX=10090 GN=Rplp0 PE=2 SV=1 Q5FWB6; O89073; Q5M8R8; D3YVM5; S4R1N1 60S acidic ribosomal protein P0 OS=Mus musculus OX=10090 GN=Rplp0 PE=2 SV=1; 60S acidic ribosomal protein P0 (Fragment) OS=Mus musculus OX=10090 GN=Rplp0 PE=2 SV=1; 60S acidic ribosomal protein P0 OS=Mus musculus OX=10090 GN=Rplp0 PE=2 SV=1; 60S acidic ribosomal protein P0 (Fragment) OS=Mus musculus OX=10090 GN=Rplp0 PE=1 SV=1; 60S acidic ribosomal protein P0 (Fragment) OS=Mus musculus OX=10090 GN=Rplp0 PE=1 SV=1 0 2 2 0.6299 0 1 1 1 840.47736 1679.94744 1679.94809 -0.39 -0.00033 0/0 0 0 10878039 HCD 30 MS2 8.480445 558.8 110 67.9442 20330 20330 20329 QEplus033719.raw F4 586.7 450.3 610.1 446.5 627.9 631.1 449 4.89 1 FALSE 1.14E-05 4.20E-10 1.879 -250 97973 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVVFGK [K].hVVFGk.[VI] N-Term(TMT6plex); K6(TMT6plex) 12 P24369; Q3UAJ1; Q3UWH9; P30412 Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus OX=10090 GN=Ppib PE=1 SV=2;Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1;Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1;Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus OX=10090 GN=Ppic PE=1 SV=1 P24369; Q3TE63; Q3UAJ1; Q3UWH9; P30412; Q5SVY2; Q9CZK9; Q9D868; A0A1L1SST0; Q4G0C5; A2BGI8; Q3UY37 Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus OX=10090 GN=Ppib PE=1 SV=2; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus OX=10090 GN=Ppic PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase (Fragment) OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.7175 0 1 1 1 572.86609 1144.7249 1144.72429 0.54 0.00031 0/0 0 0 100968336 HCD 30 MS2 42.872 849.5 7.686 67.949 20332 20332 20329 QEplus033719.raw F4 953.5 836.7 917.2 590.5 1023.3 776 222 2.23 4 FALSE 0.004165 0.07625 0.071 -250 97987 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HFALMQR [K].hFALMQR.[D] N-Term(TMT6plex) 1 Q3ZBS7 TREMBL:Q3ZBS7 (Bos taurus) Vitronectin Q3ZBS7 TREMBL:Q3ZBS7 (Bos taurus) Vitronectin 0 3 3 0.457 0 1 1 1 377.88214 1131.63187 1131.62945 2.14 0.00081 0/0 0 0 11616642 HCD 30 MS2 35.58453 448.1 62.596 67.9557 20335 20335 20329 QEplus033719.raw F4 447.4 363.7 465.8 323.8 633.3 454.4 344 3.37 1 TRUE 0.0001813 0.003969 0.528 -250 98001 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MSSVEEDSDTK [K].mSSVEEDSDTk.[R] N-Term(TMT6plex); K11(TMT6plex) 2 D3YXK2 Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=2 D3YXK2; S4R1M2 Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=2; Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=1 0 2 2 0.8239 0 1 1 1 843.41882 1685.83037 1685.8304 -0.02 -0.00002 0/0 0 0 5379250.5 HCD 30 MS2 0 395.9 110 67.9607 20337 20337 20329 QEplus033719.raw F4 398.9 368.5 459.4 300.9 452.9 395.1 123 4.26 1 FALSE 1.14E-05 1.24E-09 1.79 -250 98015 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELANQVSK [R].eLANQVSk.[D] N-Term(TMT6plex); K8(TMT6plex) 5 Q9JIK5 Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3 Q8K2L4; Q6PCP0; Q9JIK5; Q3ULC7; Q9CWZ5 RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=1; Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=2 0 2 2 0.5246 0 1 1 1 673.90607 1346.80486 1346.80439 0.35 0.00024 0/0 0 0 28097088 HCD 30 MS2 25.43297 805.5 58.017 67.9655 20339 20339 20329 QEplus033719.raw F4 758.1 686 898.7 593.9 1030.5 865.7 555 3.66 1 FALSE 1.14E-05 4.50E-05 0.923 -250 98027 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSTYSK [R].lSTYSk.[G] N-Term(TMT6plex); K6(TMT6plex) 7 Q9CZR8 "Elongation factor Ts, mitochondrial OS=Mus musculus OX=10090 GN=Tsfm PE=1 SV=1" Q80UT3; Q9CX33; Q9CZR8; Q8VDE3; Q3TA37; Q8K239; A0A1S6GWJ9 "Tsfm protein (Fragment) OS=Mus musculus OX=10090 GN=Tsfm PE=2 SV=1; Elongation factor Ts, mitochondrial OS=Mus musculus OX=10090 GN=Tsfm PE=1 SV=1; Elongation factor Ts, mitochondrial OS=Mus musculus OX=10090 GN=Tsfm PE=1 SV=1; Translation elongation factor (Fragment) OS=Mus musculus OX=10090 GN=Tsfm PE=2 SV=1; Elongation factor Ts, mitochondrial OS=Mus musculus OX=10090 GN=Tsfm PE=2 SV=1; Tsfm protein (Fragment) OS=Mus musculus OX=10090 GN=Tsfm PE=2 SV=1; Elongation factor Ts, mitochondrial OS=Mus musculus OX=10090 GN=Tsfm PE=2 SV=1" 0 2 2 0.2846 0 1 1 1 578.85278 1156.69829 1156.6978 0.43 0.00025 0/0 0 0 8765371 HCD 30 MS2 12.10512 1002.3 110 67.9754 20342 20342 20340 QEplus033719.raw F4 896 870.7 1088.7 1053.3 996.6 1108.4 262 2.46 1 FALSE 0.002071 0.03867 0.179 -250 98037 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELGTVMR [K].eLGTVMR.[MS] N-Term(TMT6plex) 4 P20801; P0DP27 "Troponin C, skeletal muscle OS=Mus musculus OX=10090 GN=Tnnc2 PE=1 SV=2;Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1" P20801; Q3UZY7; P0DP27; Q3UKW2 "Troponin C, skeletal muscle OS=Mus musculus OX=10090 GN=Tnnc2 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tnnc2 PE=2 SV=1; Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=1 SV=1" 0 2 2 0.3542 0 1 1 1 517.79755 1034.58782 1034.58658 1.19 0.00062 0/0 0 0 92602864 HCD 30 MS2 33.92792 738.2 6.732 67.9776 20343 20343 20340 QEplus033719.raw F4 804 529.8 714.7 815.4 687.3 878.1 247 2.4 2 FALSE 0.00131 0.01784 0.301 -250 98042 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVGPEVR [K].lVGPEVR.[M] N-Term(TMT6plex) 3 Q3UE11 Procollagen-lysine 5-dioxygenase OS=Mus musculus OX=10090 PE=2 SV=1 Q3UE11; Q3TZN4; Q9R0E2 "Procollagen-lysine 5-dioxygenase OS=Mus musculus OX=10090 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Plod1 PE=2 SV=1; Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Mus musculus OX=10090 GN=Plod1 PE=1 SV=1" 0 2 2 0.4211 0 1 1 1 499.81375 998.62023 998.6196 0.63 0.00031 0/0 0 0 18000234 HCD 30 MS2 48.98933 824.6 45.163 67.9799 20344 20344 20340 QEplus033719.raw F4 761.7 682.7 905 715.5 900.2 982.3 54 2.28 1 FALSE 0.002064 0.03789 0.182 -250 98048 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQRPLLGSR [K].lQRPLLGSR.[K] N-Term(TMT6plex) 4 B1ARU4 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 B1ARU4; E9QA63; Q9QXZ0; E9PVY8 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 3 3 0.5724 0 1 1 1 423.60437 1268.79856 1268.80002 -1.15 -0.00049 0/0 0 0 16149335 HCD 30 MS2 34.13155 487.5 54.365 67.9821 20345 20345 20340 QEplus033719.raw F4 414.6 250.9 643 420.2 369.1 827.2 99 3.04 1 FALSE 0.0005848 0.008764 0.425 -250 98061 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGELYR [R].mGELYR.[G] N-Term(TMT6plex) 7 A2ATP6 Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=2 A2ATP6; Q8C854-1; A7UQY4; Q8C854-3; A2ATP5; G8JL68; Q8C854 Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=2; Isoform 3 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Isoform 2 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2; Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1 0 2 2 0.2513 0 1 1 1 499.27087 997.53447 997.53382 0.66 0.00033 0/0 0 0 9753719 HCD 30 MS2 60.14189 734.8 48.537 67.9866 20347 20347 20340 QEplus033719.raw F4 696.3 660.5 844.1 587.2 856.3 764.4 95 1.99 1 FALSE 0.00574 0.09623 0.017 -250 98071 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VITEEEK [R].vITEEEk.[N] N-Term(TMT6plex); K7(TMT6plex) 1 P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 0 2 2 0.4542 0 1 1 1 653.38788 1305.76848 1305.7666 1.44 0.00094 0/0 0 0 6918711.5 HCD 30 MS2 31.01157 898.8 110 67.9892 20348 20348 20340 QEplus033719.raw F4 984.1 850.4 1011.2 655.1 957.9 933.8 449 2.84 1 FALSE 0.0001603 0.003602 0.539 -250 98080 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPVDAVQK [K].gPVDAVQk.[K] N-Term(TMT6plex); K8(TMT6plex) 2 B2RXS4 Plexin-B2 OS=Mus musculus OX=10090 GN=Plxnb2 PE=1 SV=1 B2RXS4; Q99LF0 Plexin-B2 OS=Mus musculus OX=10090 GN=Plxnb2 PE=1 SV=1; Plxnb2 protein OS=Mus musculus OX=10090 GN=Plxnb2 PE=2 SV=1 0 2 2 0.4032 0 1 1 1 636.38885 1271.77043 1271.77236 -1.51 -0.00096 0/0 0 0 5338474 HCD 30 MS2 51.6705 857.6 110 67.9917 20349 20349 20340 QEplus033719.raw F4 810.6 681.3 1013.8 735.2 858.1 1046.9 300 2.53 1 FALSE 1.14E-05 0.0001998 0.799 -250 98105 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSDPTMSSFR [K].tSDPTMSSFR.[V] N-Term(TMT6plex) 4 Q60847 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3 Q60847; E9PX70; Q60847-5; Q60847-2 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3; Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1; Isoform 5 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 2 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 0 2 2 0.6947 0 1 1 1 679.33313 1357.65898 1357.66193 -2.17 -0.00147 0/0 0 0 8208775.5 HCD 30 MS2 10.9215 584.9 110 68.004 20353 20353 20351 QEplus033719.raw F4 590.5 514.1 557.7 350.1 1008.3 489 47 2.85 1 FALSE 0.0004091 0.007321 0.452 -250 98130 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AALLTER [R].aALLTER.[T] N-Term(TMT6plex) 2 G3X956 FACT complex subunit OS=Mus musculus OX=10090 GN=Supt16 PE=1 SV=1 G3X956; Q920B9 FACT complex subunit OS=Mus musculus OX=10090 GN=Supt16 PE=1 SV=1; FACT complex subunit SPT16 OS=Mus musculus OX=10090 GN=Supt16h PE=1 SV=2 0 2 2 0.283 0 1 1 1 501.81046 1002.61363 1002.61451 -0.87 -0.00044 0/0 0 0 19862574 HCD 30 MS2 35.90725 969.7 34.374 68.0132 20357 20357 20351 QEplus033719.raw F4 1067.3 851.5 1036.9 829.1 1073 960.6 137 2.12 1 FALSE 0.0008718 0.01192 0.374 -250 98140 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMEQTIK [K].nMEQTIk.[D] N-Term(TMT6plex); K7(TMT6plex) 6 B2RY26 Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1 Q2TAW4; B2RQQ1; E9Q264; A0A2I3BPY4; B2RY26; B2RXX9 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myosin, heavy chain 15 OS=Mus musculus OX=10090 GN=Myh15 PE=1 SV=1; Myosin-6 (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1" 0 2 2 0.2786 0 1 1 1 661.38177 1321.75627 1321.75499 0.97 0.00064 0/0 0 0 5433511.5 HCD 30 MS2 38.92165 830.6 110 68.0158 20358 20358 20351 QEplus033719.raw F4 927.4 400.4 681 1341.6 578.2 1055.2 446 2.62 1 FALSE 0.0003599 0.006945 0.459 -250 98188 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADAEVLRK [R].aDAEVLRk.[A] N-Term(TMT6plex); K8(TMT6plex) 2 P48036 Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 A0A0G2JGQ0; P48036 Annexin A5 (Fragment) OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1; Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 1 2 2 0.3552 0 1 1 1 680.42236 1359.83745 1359.83602 1.05 0.00071 0/0 0 0 6492987.5 HCD 30 MS2 33.88141 546.5 110 68.0374 20366 20366 20362 QEplus033719.raw F4 541.1 501.5 580.7 354.7 827.2 473.7 554 1.83 1 FALSE 0.0009259 0.0128 0.362 -250 98205 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDTLHETEDVK [R].dDTLHETEDVk.[E] N-Term(TMT6plex); K11(TMT6plex) 2 Q9CQB4 Cytochrome b-c1 complex subunit 7 OS=Mus musculus OX=10090 GN=Uqcrb PE=1 SV=1 Q9CQB4; Q9D855 Cytochrome b-c1 complex subunit 7 OS=Mus musculus OX=10090 GN=Uqcrb PE=1 SV=1; Cytochrome b-c1 complex subunit 7 OS=Mus musculus OX=10090 GN=Uqcrb PE=1 SV=3 0 3 3 0.7433 0 1 1 1 587.30798 1759.9094 1759.91143 -1.15 -0.00068 0/0 0 0 12659520 HCD 30 MS2 44.18204 844.4 53.731 68.0422 20368 20368 20362 QEplus033719.raw F4 835.4 629.9 927.3 845.5 948.7 879.7 240 3.74 1 FALSE 1.14E-05 8.43E-07 1.251 -250 98216 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELVGPVAR [K].eLVGPVAR.[F] N-Term(TMT6plex) 2 P50544 "Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadvl PE=1 SV=3" P50544; B1AR28 "Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadvl PE=1 SV=3; Very long-chain-specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadvl PE=1 SV=1" 0 2 2 0.5556 0 1 1 1 535.33221 1069.65715 1069.65671 0.41 0.00022 0/0 0 0 10773866 HCD 30 MS2 10.84429 792.5 110 68.0469 20370 20370 20362 QEplus033719.raw F4 825.9 569.9 827.8 751.1 835.2 945.2 62 2.34 1 FALSE 0.002049 0.03607 0.189 -250 98226 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MTAMDNASK [R].mTAMDNASk.[N] N-Term(TMT6plex); K9(TMT6plex) 5 Q8C2Q8; A2AKU9 ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1;ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1 Q9ERA8; Q8C2Q8; Q9D9D7; Q3UD06; A2AKU9 ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=2 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=2 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1 0 2 2 0.7201 0 1 1 1 713.8764 1426.74553 1426.74344 1.46 0.00104 0/0 0 0 10457203 HCD 30 MS2 0 552.4 110 68.0494 20371 20371 20362 QEplus033719.raw F4 607.5 443.3 588 583.8 453.9 637.8 181 3.93 2 FALSE 1.14E-05 3.38E-06 1.137 -250 98242 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYVPPKGDK [K].nYVPPkGDk.[K] N-Term(TMT6plex); K6(TMT6plex); K9(TMT6plex) 5 Q9CT19 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb2 PE=2 SV=3 A0A1B0GQX9; Q9CT19; P30681; Q3UAZ7; Q3U566 High mobility group protein B2 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb2 PE=2 SV=3; High mobility group protein B2 OS=Mus musculus OX=10090 GN=Hmgb2 PE=1 SV=3; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hmgb2 PE=2 SV=1 1 3 3 0.4914 0 1 1 1 569.0141 1705.02774 1705.02517 1.51 0.00086 0/0 0 0 6767491 HCD 30 MS2 11.2691 729.8 110 68.0592 20374 20374 20373 QEplus033719.raw F4 796.7 769.9 706.3 535.1 913 657.5 383 2.32 1 FALSE 0.0004989 0.007801 0.443 -250 98258 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGEPIENEEEDDEK [K].dGEPIENEEEDDEk.[H] N-Term(TMT6plex); K14(TMT6plex) 9 E9QB01; A0A0A6YY47 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2;Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 E9QB01; P13595-3; P13595-2; A0A0A6YWU2; P13595-4; A0A0A6YY91; A0A0A6YY47; P13595; E9Q589 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2; Isoform 3 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Isoform 2 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Isoform 4 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 (Fragment) OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=3; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 0 3 3 0.8145 0 1 1 1 702.66339 2105.97562 2105.97627 -0.31 -0.00022 0/0 0 0 9701792 HCD 30 MS2 28.82644 570.2 110 68.069 20378 20378 20373 QEplus033719.raw F4 563.1 378.3 645.2 574.9 525.9 733.9 58 4.96 2 FALSE 1.14E-05 3.83E-08 1.506 -250 98281 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASAYNNLK [R].aSAYNNLk.[EG] N-Term(TMT6plex); K8(TMT6plex) 3 Q3TG21 V-type proton ATPase subunit C OS=Mus musculus OX=10090 GN=Atp6v1c1 PE=2 SV=1 Q9D9Z4; Q3TG21; Q9Z1G3 V-type proton ATPase subunit C OS=Mus musculus OX=10090 GN=Atp6v1c1 PE=2 SV=1; V-type proton ATPase subunit C OS=Mus musculus OX=10090 GN=Atp6v1c1 PE=2 SV=1; V-type proton ATPase subunit C 1 OS=Mus musculus OX=10090 GN=Atp6v1c1 PE=1 SV=4 0 2 2 0.364 0 1 1 1 669.89319 1338.7791 1338.77817 0.69 0.00046 0/0 0 0 5375787.5 HCD 30 MS2 19.96737 413 110 68.0763 20381 20381 20373 QEplus033719.raw F4 374.3 356.4 472.7 378.4 408.5 487.7 352 2.39 1 FALSE 1.14E-05 0.0002571 0.778 -250 98290 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGEPIENEEEDDEK [K].dGEPIENEEEDDEk.[H] N-Term(TMT6plex); K14(TMT6plex) 9 E9QB01; A0A0A6YY47 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2;Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 E9QB01; P13595-3; P13595-2; A0A0A6YWU2; P13595-4; A0A0A6YY91; A0A0A6YY47; P13595; E9Q589 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2; Isoform 3 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Isoform 2 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Isoform 4 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 (Fragment) OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=3; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 0 2 2 0.8307 0 1 1 1 1053.49207 2105.97685 2105.97627 0.28 0.00029 0/0 0 0 3362744 HCD 30 MS2 19.35761 226.6 110 68.0788 20382 20382 20373 QEplus033719.raw F4 234 111.6 264.9 249.9 166.9 332.3 56 5.08 2 FALSE 1.14E-05 1.40E-15 2.919 -250 98296 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YIPPHLR [R].yIPPHLR.[N] N-Term(TMT6plex) 6 B9EKE9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1 B9EKE9; B7ZWF1; Q62095; Q3TQX5; P16381; Q3U484 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; ATP-dependent RNA helicase DDX3Y OS=Mus musculus OX=10090 GN=Ddx3y PE=1 SV=2; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=1; Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus OX=10090 GN=D1Pas1 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3y PE=2 SV=1 0 3 3 0.3392 0 1 1 1 375.56412 1124.6778 1124.67778 0.02 0.00001 0/0 0 0 3253544.75 HCD 30 MS2 78.06567 592 110 68.0813 20383 20383 20373 QEplus033719.raw F4 591 508.8 698.5 533.2 535.5 685.1 153 1.71 1 FALSE 0.004873 0.08528 0.047 -250 98306 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQGVMVGMGQK [R-].hQGVMVGMGQk.[D] N-Term(TMT6plex); K11(TMT6plex) 43 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q61274; Q3UIJ3; Q3UCF8; Q3TSB7; E9Q2D1; Q9CXK3; Q61273; Q61275; Q3UAF6; Q3UD81; Q3U122; Q3UAA9; A0A1D5RM20; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; A1E281; Q3UAF7; G3UZ07; Q3TIJ9; P62737; G3UYG0; P68134; Q61276; Q3UBP6; D3YZY0; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804; E9Q606 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-cardiac actin (Fragment) OS=Mus musculus domesticus OX=10092 GN=alpha-cardiac actin PE=3 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=3 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1" 0 3 3 0.7438 0 1 1 1 543.97083 1629.89792 1629.89692 0.61 0.00033 0/0 0 0 38092888 HCD 30 MS2 28.69913 853 42.71 68.0886 20385 20385 20384 QEplus033719.raw F4 867.6 665.8 937.6 729.3 955.7 962.2 384 5.27 4 FALSE 1.14E-05 4.72E-10 1.869 -250 98311 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQDAEIAR [K].lQDAEIAR.[L] N-Term(TMT6plex) 1 P14069 Protein S100-A6 OS=Mus musculus OX=10090 GN=S100a6 PE=1 SV=3 P14069 Protein S100-A6 OS=Mus musculus OX=10090 GN=S100a6 PE=1 SV=3 0 2 2 0.4631 0 1 1 1 572.8302 1144.65312 1144.65235 0.67 0.00039 0/0 0 0 265977264 HCD 30 MS2 46.23184 806.3 2.716 68.0934 20387 20387 20384 QEplus033719.raw F4 829.5 776.8 875.8 592.6 1013.2 749.8 368 2.44 1 FALSE 1.14E-05 0.0004925 0.724 -250 98340 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SINYDEK [R].sINYDEk.[D] N-Term(TMT6plex); K7(TMT6plex) 5 A2AN08 E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1 A2AN08-2; Z4YMA7; A2AN08-3; A2AN08-5; A2AN08 Isoform 2 of E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4; E3 ubiquitin-protein ligase UBR4 (Fragment) OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1; Isoform 3 of E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4; Isoform 5 of E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4; E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1 0 2 2 0.2941 0 1 1 1 663.86786 1326.72844 1326.73055 -1.59 -0.00106 0/0 0 0 5186874.5 HCD 30 MS2 33.58428 610.9 110 68.1029 20391 20391 20384 QEplus033719.raw F4 620.1 431.4 649.5 617.9 596.9 749.5 256 2.38 1 FALSE 0.001142 0.01519 0.33 -250 98347 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIDNPDYK [R].qIDNPDYk.[G] N-Term(TMT6plex); K8(TMT6plex) 2 B2MWM9 Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 Q3UWP8; B2MWM9 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Calr PE=2 SV=1; Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 0 2 2 0.5029 0 1 1 1 725.90039 1450.7935 1450.79422 -0.49 -0.00036 0/0 0 0 4599638.5 HCD 30 MS2 38.92236 583.4 110 68.1054 20392 20392 20384 QEplus033719.raw F4 634.4 462.2 668.6 601.1 522.1 612 321 3.44 1 FALSE 1.14E-05 5.74E-05 0.903 -250 98360 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TICSSVDK [R].tIcSSVDk.[L] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 6 Q8C2D1 "Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1" Q3U890; Q8C2D1; Q61035; Q8VDX8; Q3UDH1; Q9D094 "Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars1 PE=1 SV=2; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1; Histidine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Hars PE=2 SV=1" 0 2 2 0.5672 0 1 1 1 684.38434 1367.7614 1367.76047 0.68 0.00046 0/0 0 0 3289876.25 HCD 30 MS2 0 375.6 110 68.1105 20394 20394 20384 QEplus033719.raw F4 407.9 300.7 399.7 279.4 462.9 403.1 331 3.05 1 FALSE 1.14E-05 0.0001714 0.812 -250 98370 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AFEEAEK [K].aFEEAEk.[N] N-Term(TMT6plex); K7(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 0 2 2 0.2727 0 1 1 1 641.35797 1281.70867 1281.70909 -0.33 -0.00021 0/0 0 0 8054775.5 HCD 30 MS2 35.17084 905.5 110 68.1178 20396 20396 20395 QEplus033719.raw F4 910.3 899.4 973.5 694 1056.6 899.1 343 1.65 1 FALSE 0.001185 0.01618 0.319 -250 98376 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQKEEDEQEDLTK [R].sQkEEDEQEDLTk.[D] N-Term(TMT6plex); K3(TMT6plex); K13(TMT6plex) 5 P97496 SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=2 P97496; P97496-2; Q3UZD0; Q3UMX0; Q3UNN4 SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=2; Isoform 2 of SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1; SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Smarcc1 PE=2 SV=1; SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=1 1 3 3 0.6801 0 1 1 1 756.07343 2266.20572 2266.20175 1.75 0.00133 0/0 0 0 2760643.5 HCD 30 MS2 0 232 110 68.1203 20397 20397 20395 QEplus033719.raw F4 230.9 236.2 226.5 157.2 335 206.5 442 3.72 1 FALSE 1.14E-05 3.55E-13 2.462 -250 98381 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AINEAYK [R].aINEAYk.[E] N-Term(TMT6plex); K7(TMT6plex) 7 P14824; Q99JX6 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3;Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 Q3V2Z4; P14824; F8WIT2; Q3UI56; Q3TUI1; Q99JX6; Q3UDK4 Annexin OS=Mus musculus OX=10090 PE=2 SV=1; Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 0 2 2 0.4122 0 1 1 1 633.87695 1266.74663 1266.74581 0.65 0.00041 0/0 0 0 37687036 HCD 30 MS2 15.31393 1235 43.949 68.1226 20398 20398 20395 QEplus033719.raw F4 1350.1 857.2 1286.1 1020.6 1516.5 1379.6 372 2.96 2 FALSE 0.0005556 0.00827 0.434 -250 98394 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNQQNLGTIK [K].sNQQNLGTIk.[C] N-Term(TMT6plex); K10(TMT6plex) 3 Q6NZB3 Ribonucleoside-diphosphate reductase OS=Mus musculus OX=10090 GN=Rrm1 PE=2 SV=1 Q6NZB3; P07742; Q05DU8 Ribonucleoside-diphosphate reductase OS=Mus musculus OX=10090 GN=Rrm1 PE=2 SV=1; Ribonucleoside-diphosphate reductase large subunit OS=Mus musculus OX=10090 GN=Rrm1 PE=1 SV=2; Ribonucleoside-diphosphate reductase (Fragment) OS=Mus musculus OX=10090 GN=Rrm1 PE=2 SV=1 0 2 2 0.6101 0 1 1 1 780.96002 1560.91277 1560.91098 1.15 0.0009 0/0 0 0 4267954.5 HCD 30 MS2 0 292.8 110 68.1319 20402 20402 20395 QEplus033719.raw F4 303.1 223.3 241.6 185.6 507.6 295.5 475 3.95 1 FALSE 1.14E-05 1.98E-08 1.561 -250 98413 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVDTTAEQTSFR [K].tVDTTAEQTSFR.[I] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.6699 0 1 1 1 792.90619 1584.8051 1584.80668 -1 -0.00079 0/0 0 0 5201970 HCD 30 MS2 0 216.6 110 68.1394 20405 20405 20395 QEplus033719.raw F4 253.3 63 176 386.1 77.3 343.6 179 4.15 2 FALSE 1.14E-05 9.88E-10 1.808 -250 98437 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAQAQPIM [K].kAQAQPIM.[-] N-Term(TMT6plex); K1(TMT6plex) 5 Q3TJD4 ATP synthase subunit b OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1 Q3TJD4; Q9CQQ7; A0A0G2JGX3; Q64218; Q3UF04 "ATP synthase subunit b OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1; ATP synthase F(0) complex subunit B1, mitochondrial OS=Mus musculus OX=10090 GN=Atp5pb PE=1 SV=1; ATP synthase subunit b (Fragment) OS=Mus musculus OX=10090 GN=Atp5pb PE=1 SV=1; ATP synthase subunit b (Fragment) OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1; ATP synthase subunit b OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1" 1 2 2 0.6398 0 1 1 1 672.90698 1344.80669 1344.80736 -0.5 -0.00034 0/0 0 0 14530597 HCD 30 MS2 0 574 94.775 68.1636 20412 20412 20408 QEplus033719.raw F4 530.5 426 612.3 637.3 524.9 713.2 384 1.86 1 FALSE 0.009813 0.1913 -0.127 -250 98441 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYEELCPR [R].eYEELcPR.[G] N-Term(TMT6plex); C6(Carbamidomethyl) 3 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q60784 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Fibrillin-1 (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1 0 2 2 0.5788 0 1 1 1 662.82397 1324.64067 1324.64047 0.15 0.0001 0/0 0 0 6159983.5 HCD 30 MS2 41.49306 795 110 68.1661 20413 20413 20408 QEplus033719.raw F4 860.4 491.1 804.7 1004.3 630.2 979.5 76 2.92 1 FALSE 5.44E-05 0.002282 0.586 -250 98452 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VMTSGTGAPAK [K].vMTSGTGAPAk.[I] N-Term(TMT6plex); K11(TMT6plex) 2 Q61191 Host cell factor 1 OS=Mus musculus OX=10090 GN=Hcfc1 PE=1 SV=2 Q61191; B1AUX2 Host cell factor 1 OS=Mus musculus OX=10090 GN=Hcfc1 PE=1 SV=2; Host cell factor 1 OS=Mus musculus OX=10090 GN=Hcfc1 PE=1 SV=1 0 2 2 0.5725 0 1 1 1 739.42657 1477.84587 1477.84487 0.68 0.0005 0/0 0 0 4361298 HCD 30 MS2 0 207.6 110 68.1711 20415 20415 20408 QEplus033719.raw F4 204 201.4 233.3 142.2 251 214 444 4.14 1 FALSE 1.14E-05 6.67E-11 2.03 -250 98494 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVCDIPPR [K].tAVcDIPPR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 9 Q7TMM9; P99024; P68372; Q9CWF2 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1 Q7TMM9; Q9D6F9; Q62363; Q80ZV2; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2 "Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Beta-tubulin gene M-beta-2, 3' end (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1" 0 2 2 0.6724 0 1 1 1 629.3446 1257.68193 1257.68227 -0.27 -0.00017 0/0 0 0 19981002 HCD 30 MS2 13.39886 686.7 57.63 68.1882 20421 20421 20419 QEplus033719.raw F4 682 662.2 734.9 510.3 883.4 647.5 221 2.93 4 FALSE 1.14E-05 2.36E-05 0.976 -250 98503 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGIGHLLR [K].qGIGHLLR.[G] N-Term(TMT6plex) 5 Q8R1X6 Spartin OS=Mus musculus OX=10090 GN=Spart PE=1 SV=1 Q8R1X6-2; D3Z2D6; D3Z3F8; D3Z1M5; Q8R1X6 "Isoform 2 of Spartin OS=Mus musculus OX=10090 GN=Spart; Spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) (Fragment) OS=Mus musculus OX=10090 GN=Spg20 PE=1 SV=1; Spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) OS=Mus musculus OX=10090 GN=Spg20 PE=1 SV=1; Spastic paraplegia 20, spartin (Troyer syndrome) homolog (human) (Fragment) OS=Mus musculus OX=10090 GN=Spg20 PE=1 SV=1; Spartin OS=Mus musculus OX=10090 GN=Spart PE=1 SV=1" 0 3 3 0.2861 0 1 1 1 374.90335 1122.6955 1122.69449 0.9 0.00034 0/0 0 0 6548883 HCD 30 MS2 49.40785 329 85.254 68.1904 20422 20422 20419 QEplus033719.raw F4 381.3 283.9 349.1 305.8 332.5 321.5 132 4.09 1 FALSE 1.14E-05 2.85E-05 0.961 -250 98534 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VPGQEETVK [R].vPGQEETVk.[N] N-Term(TMT6plex); K9(TMT6plex) 4 Q4FE56 Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Usp9x PE=1 SV=1 Q4FE56; Q8C7T5; P70398; E9PWA9 Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Usp9x PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Usp9x PE=2 SV=2; Probable ubiquitin carboxyl-terminal hydrolase FAF-X OS=Mus musculus OX=10090 GN=Usp9x PE=1 SV=2; Probable ubiquitin carboxyl-terminal hydrolase FAF-X (Fragment) OS=Mus musculus OX=10090 GN=Usp9x PE=1 SV=8 0 2 2 0.5824 0 1 1 1 722.92462 1444.84197 1444.84117 0.55 0.0004 0/0 0 0 3191035.25 HCD 30 MS2 0 225.5 110 68.2029 20427 20427 20419 QEplus033719.raw F4 228.4 194.4 234.6 215.8 231.4 248.6 429 2.73 1 FALSE 1.14E-05 1.58E-05 1.01 -250 98541 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVMPEVNR [K].dVMPEVNR.[V] N-Term(TMT6plex) 4 P06745 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4 Q3ZBD7; B2RXT5; P06745; B7ZWL9 SWISS-PROT:Q3ZBD7 (Bos taurus) Glucose-6-phosphate isomerase; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1 0 2 2 0.6079 0 1 1 1 594.81598 1188.62468 1188.62442 0.22 0.00013 0/0 0 0 39538804 HCD 30 MS2 3.309651 594.5 30.164 68.2102 20429 20429 20428 QEplus033719.raw F4 614.4 403.8 613 648.3 552.1 735.2 207 2.78 1 TRUE 0.0002419 0.005 0.501 -250 98547 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAGESESNLRK [K].lAGESESNLRk.[A] N-Term(TMT6plex); K11(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 1 3 3 0.6767 0 1 1 1 554.65796 1661.95932 1661.95865 0.4 0.00022 0/0 0 0 68673072 HCD 30 MS2 2.015913 1037.8 28.013 68.2176 20431 20431 20430 QEplus033719.raw F4 1126.5 934.8 1168.8 836.6 1072.9 1087.2 445 4.33 1 FALSE 1.14E-05 1.30E-09 1.785 -250 98555 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEYDEAGPSIVHRK [K].qEYDEAGPSIVHRk.[C] N-Term(TMT6plex); K14(TMT6plex) 8 Q3UIJ3; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q3TG92; Q3UIJ3; Q9CXK3; Q61272; P62737; P68134; P68033; Q61264 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1" 1 4 4 0.6449 0 1 1 1 522.5379 2087.12978 2087.12857 0.58 0.0003 0/0 0 0 31539074 HCD 30 MS2 4.617785 363.5 26.493 68.2223 20433 20433 20430 QEplus033719.raw F4 550.4 212.1 382 490.8 295.8 250.1 465 4.9 3 FALSE 1.14E-05 8.41E-11 2.011 -250 98563 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FVTGNK [R].fVTGNk.[I] N-Term(TMT6plex); K6(TMT6plex) 2 Q5BLJ7 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1 Q921R2; Q5BLJ7 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1; 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1 0 2 2 0.4112 0 1 1 1 562.34778 1123.68828 1123.68757 0.64 0.00036 0/0 0 0 47751440 HCD 30 MS2 27.35383 984.9 21.191 68.2245 20434 20434 20430 QEplus033719.raw F4 1069.9 757.4 1051.3 880.6 1152.1 997.8 138 1.97 1 FALSE 0.007474 0.1215 -0.045 -250 98573 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QENGASVILR [R].qENGASVILR.[D] N-Term(TMT6plex) 8 Q80T06 Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1 Q8BW50; Q80T06; A0A0R4J1E2; E9QN08; D3YZT9; P57776-3; P57776; D3YUQ9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Eef1d PE=2 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 3 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=3; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=8 0 2 2 0.4091 0 1 1 1 658.37964 1315.752 1315.75313 -0.86 -0.00056 0/0 0 0 8536787 HCD 30 MS2 14.7984 698 110 68.2271 20435 20435 20430 QEplus033719.raw F4 696 575.1 756.7 607.5 757.4 795.2 432 2.86 1 FALSE 1.14E-05 0.0002891 0.769 -250 98587 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPVQSQQPSATTPSGADEK [K].tPVQSQQPSATTPSGADEk.[S] N-Term(TMT6plex); K19(TMT6plex) 9 Q3TWL6 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1 A0A338P6M5; Q3TI61; Q3TWL6; Q3TW71; Q3U9Y8; E9Q2S8; Q3TIP0; Q8VDM4; Q3TXV1 26S proteasome non-ATPase regulatory subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Psmd2 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1 0 3 3 0.8096 0 1 1 1 796.42078 2387.24778 2387.24545 0.97 0.00077 0/0 0 0 4062586.25 HCD 30 MS2 12.08888 134.3 110 68.2321 20437 20437 20430 QEplus033719.raw F4 145.9 109.9 140.2 109 158.9 142 380 6.67 1 FALSE 1.14E-05 7.73E-13 2.398 -250 98631 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WGTDEEK [K].wGTDEEk.[F] N-Term(TMT6plex); K7(TMT6plex) 2 P48036 Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 A0A0G2JGQ0; P48036 Annexin A5 (Fragment) OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1; Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 0 2 2 0.4069 0 1 1 1 661.85315 1322.69902 1322.69925 -0.17 -0.00012 0/0 0 0 10428153 HCD 30 MS2 27.1763 1206.2 110 68.2618 20446 20446 20443 QEplus033719.raw F4 1397 917.3 1172.6 1423.4 1066.6 1260.4 259 2.31 1 FALSE 0.001231 0.01666 0.313 -250 98639 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEFTVETR [R].aEFTVETR.[S] N-Term(TMT6plex) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; B7FAV1; F6XC15; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.5635 0 1 1 1 591.32068 1181.63408 1181.63637 -1.94 -0.00114 0/0 0 0 4342460 HCD 30 MS2 57.20631 928.5 110 68.2643 20447 20447 20443 QEplus033719.raw F4 924 865.7 1078.5 714.8 996.2 991.9 171 1.97 1 FALSE 0.0003408 0.006494 0.468 -250 98647 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIDNPDYK [R].qIDNPDYk.[G] N-Term(TMT6plex); K8(TMT6plex) 2 B2MWM9 Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 Q3UWP8; B2MWM9 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Calr PE=2 SV=1; Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 0 3 3 0.6547 0 1 1 1 484.26978 1450.79477 1450.79422 0.38 0.00019 0/0 0 0 15382733 HCD 30 MS2 42.55114 968.2 95.263 68.2665 20448 20448 20443 QEplus033719.raw F4 1010.3 754.6 1062 889.2 1027.6 1065.6 355 2.78 1 FALSE 0.0005076 0.007859 0.442 -250 98659 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTDVGITHFR [K].qTDVGITHFR.[S] N-Term(TMT6plex) 1 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 0 3 3 0.6184 0 1 1 1 468.26044 1402.76676 1402.76403 1.95 0.00091 0/0 0 0 8385622 HCD 30 MS2 51.41427 662.4 110 68.2713 20450 20450 20443 QEplus033719.raw F4 646.9 536.1 787.1 573.2 658.4 772.9 361 3.59 1 FALSE 1.14E-05 2.59E-06 1.159 -250 98670 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEYDEAGPSIVHRK [K].qEYDEAGPSIVHRk.[C] N-Term(TMT6plex); K14(TMT6plex) 8 Q3UIJ3; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q3TG92; Q3UIJ3; Q9CXK3; Q61272; P62737; P68134; P68033; Q61264 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1" 1 3 3 0.6559 0 1 1 1 696.3822 2087.13205 2087.12857 1.67 0.00116 0/0 0 0 4837583 HCD 30 MS2 24.01622 536.1 110 68.2763 20452 20452 20443 QEplus033719.raw F4 767.6 223 521.9 800.4 331.9 572.1 467 4.01 3 FALSE 1.14E-05 7.50E-12 2.211 -250 98679 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YVEVSPATER [R].yVEVSPATER.[Q] N-Term(TMT6plex) 4 V9GXJ1 "Predicted gene, 28036 OS=Mus musculus OX=10090 GN=Gm28036 PE=4 SV=1" V9GXJ1; Q8R4X3; Q6ZQ53; F6YJB6 "Predicted gene, 28036 OS=Mus musculus OX=10090 GN=Gm28036 PE=4 SV=1; RNA-binding protein 12 OS=Mus musculus OX=10090 GN=Rbm12 PE=1 SV=3; MKIAA0765 protein (Fragment) OS=Mus musculus OX=10090 GN=Cpne1 PE=2 SV=1; Predicted gene, 28036 (Fragment) OS=Mus musculus OX=10090 GN=Gm28036 PE=4 SV=1" 0 2 2 0.4943 0 1 1 1 690.37323 1379.73918 1379.73681 1.72 0.00119 0/0 0 0 4846884.5 HCD 30 MS2 36.64418 342.6 110 68.2788 20453 20453 20443 QEplus033719.raw F4 317 322.5 362.7 258.1 412.9 382.1 282 2.63 1 FALSE 1.14E-05 0.0001397 0.829 -250 98701 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGEIYCK [K].eGEIYck.[G] N-Term(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex) 5 Q71V27 Smooth muscle LIM protein OS=Mus musculus OX=10090 GN=Csrp2 PE=2 SV=1 Q71V27; A0A1W2P845; Q6QMT3; Q9D1M8; P97314 Smooth muscle LIM protein OS=Mus musculus OX=10090 GN=Csrp2 PE=2 SV=1; Cysteine and glycine-rich protein 2 OS=Mus musculus OX=10090 GN=Csrp2 PE=1 SV=1; CSRP2 (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csrp2 PE=2 SV=1; Cysteine and glycine-rich protein 2 OS=Mus musculus OX=10090 GN=Csrp2 PE=1 SV=3 0 2 2 0.5728 0 1 1 1 678.86597 1356.72466 1356.72336 0.96 0.00065 0/0 0 0 18838510 HCD 30 MS2 8.010352 1069.3 110 68.2934 20458 20458 20454 QEplus033719.raw F4 1215.6 901 928 815.1 1689.1 867.2 199 3.02 1 FALSE 0.0008268 0.01138 0.383 -250 98730 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKPLGEQER [K].lkPLGEQER.[A] N-Term(TMT6plex); K2(TMT6plex) 2 A0A0R4IZY0 Thimet oligopeptidase OS=Mus musculus OX=10090 GN=Thop1 PE=1 SV=1 A0A0R4IZY0; Q8C1A5 Thimet oligopeptidase OS=Mus musculus OX=10090 GN=Thop1 PE=1 SV=1; Thimet oligopeptidase OS=Mus musculus OX=10090 GN=Thop1 PE=1 SV=1 0 3 3 0.4266 0 1 1 1 509.98175 1527.9307 1527.9259 3.14 0.0016 0/0 0 0 5682963 HCD 30 MS2 41.01638 1369.2 109.08 68.3053 20463 20463 20454 QEplus033719.raw F4 1445.7 955 1478.4 1286.8 1464.7 1584.3 292 1.43 1 FALSE 0.0002419 0.005003 0.501 -250 98743 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FHVEEEGK [R].fHVEEEGk.[G] N-Term(TMT6plex); K8(TMT6plex) 3 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 P09041; P09411; S4R2M7 Phosphoglycerate kinase 2 OS=Mus musculus OX=10090 GN=Pgk2 PE=1 SV=4; Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4; Phosphoglycerate kinase OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=1 0 3 3 0.6616 0 1 1 1 478.26627 1432.78424 1432.78365 0.41 0.0002 0/0 0 0 73363392 HCD 30 MS2 11.3022 464.9 15.613 68.3152 20466 20466 20465 QEplus033719.raw F4 485.2 318.2 456.4 534.9 458.1 536.4 327 3.93 1 FALSE 1.14E-05 1.16E-06 1.225 -250 98746 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FHVEEEGK [R].fHVEEEGk.[G] N-Term(TMT6plex); K8(TMT6plex) 3 P09411 Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4 P09041; P09411; S4R2M7 Phosphoglycerate kinase 2 OS=Mus musculus OX=10090 GN=Pgk2 PE=1 SV=4; Phosphoglycerate kinase 1 OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=4; Phosphoglycerate kinase OS=Mus musculus OX=10090 GN=Pgk1 PE=1 SV=1 0 2 2 0.4856 0 1 1 1 716.89642 1432.78557 1432.78365 1.34 0.00096 0/0 0 0 5737524 HCD 30 MS2 0 423.5 110 68.3177 20467 20467 20465 QEplus033719.raw F4 409.7 304.6 431.6 460 463.1 472 331 3.13 1 FALSE 1.14E-05 0.0008681 0.675 -250 98763 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IRDQMAATEQDK [K].iRDQMAATEQDk.[T] N-Term(TMT6plex); K12(TMT6plex) 1 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 1 3 3 0.7093 0 1 1 1 622.00458 1863.99918 1863.99987 -0.37 -0.00023 0/0 0 0 15610584 HCD 30 MS2 26.128 752.8 52.109 68.3222 20469 20469 20465 QEplus033719.raw F4 852.5 214.1 603.6 1365.4 179.3 1302.1 405 5.71 1 FALSE 1.14E-05 1.26E-13 2.548 -250 98787 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAGESESNLRK [K].lAGESESNLRk.[A] N-Term(TMT6plex); K11(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 1 2 2 0.6183 0 1 1 1 831.4837 1661.96013 1661.95865 0.89 0.00074 0/0 0 0 5479636 HCD 30 MS2 0 176.8 110 68.3344 20474 20474 20465 QEplus033719.raw F4 187.2 157.1 197.9 159.2 181.6 177.6 446 3.17 1 FALSE 1.14E-05 8.06E-09 1.635 -250 98797 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADAEVLRK [R].aDAEVLRk.[A] N-Term(TMT6plex); K8(TMT6plex) 2 P48036 Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 A0A0G2JGQ0; P48036 Annexin A5 (Fragment) OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1; Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 1 3 3 0.2136 0 1 1 1 453.95056 1359.83713 1359.83602 0.82 0.00037 0/0 0 0 167024512 HCD 30 MS2 7.160093 605.6 6.075 68.3442 20477 20477 20476 QEplus033719.raw F4 587.6 543.5 717.1 449.2 776.8 559.2 554 2.95 1 FALSE 5.44E-05 0.001991 0.599 -250 98803 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MMNTDLSR [K].mMNTDLSR.[I] N-Term(TMT6plex) 3 Q9D8E6 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3 Q9D8E6; Q5ZEY2; Q9CSM5 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3; Ribosomal protein L4 (Fragment) OS=Mus musculus OX=10090 GN=Rpl4 PE=2 SV=1; 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=2 SV=2 0 2 2 0.5882 0 1 1 1 598.80219 1196.59709 1196.59649 0.5 0.0003 0/0 0 0 31297262 HCD 30 MS2 9.511084 788.6 43.854 68.3465 20478 20478 20476 QEplus033719.raw F4 864.7 634 819.9 682.4 872.3 858.5 102 3.06 1 FALSE 0.0001707 0.003921 0.529 -250 98808 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANEVISK [K].aNEVISk.[L] N-Term(TMT6plex); K7(TMT6plex) 9 Q6A0F1 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1 Q9CS06; H3BJB6; Q8BVY8; Q3UKQ2; Q9CRW7; Q6A0F1; H3BL49; P42932; Q9WVS5 CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; T-complex protein 1 subunit theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta (Fragment) OS=Mus musculus OX=10090 GN=Cct8 PE=2 SV=1; CCT-theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=1; T-complex protein 1 subunit theta OS=Mus musculus OX=10090 GN=Cct8 PE=1 SV=3; CCT-theta OS=Mus musculus OX=10090 GN=Cctq PE=3 SV=1 0 2 2 0.0841 0 1 1 1 609.87708 1218.74687 1218.74581 0.87 0.00053 0/0 0 0 56657824 HCD 30 MS2 75.40927 804.8 11.033 68.3488 20479 20479 20476 QEplus033719.raw F4 817.4 612.2 862.2 693.5 951.2 892.2 553 2.26 1 FALSE 0.0003408 0.006558 0.467 -250 98828 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVDYDSAR [K].lVDYDSAR.[H] N-Term(TMT6plex) 15 A0A3Q4EBK4 Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1 A0A668KM31; Q6P1B9; O08539-2; S4R2J8; S4R1B8; C6EQG9; A0A3Q4EBK4; D3Z6Q9; A0A5F8MQ05; A0A0G2JEG8; S4R270; A0A3Q4EBR8; O08539; Q7TQF7; Q8BXH2 Amphiphysin OS=Mus musculus OX=10090 GN=Amph PE=1 SV=1; Bin1 protein OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Isoform 2 of Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1; Bridging integrator 2 OS=Mus musculus OX=10090 GN=Bin2 PE=1 SV=1; Bridging integrator 2 OS=Mus musculus OX=10090 GN=Bin2 PE=1 SV=1; ASL1/Amph fusion protein OS=Mus musculus OX=10090 PE=2 SV=1; Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Bridging integrator 2 OS=Mus musculus OX=10090 GN=Bin2 PE=1 SV=1; Bridging integrator 2 OS=Mus musculus OX=10090 GN=Bin2 PE=1 SV=1; Amphiphysin OS=Mus musculus OX=10090 GN=Amph PE=1 SV=1; Bridging integrator 2 OS=Mus musculus OX=10090 GN=Bin2 PE=1 SV=1; Myc box-dependent-interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Myc box-dependent-interacting protein 1 OS=Mus musculus OX=10090 GN=Bin1 PE=1 SV=1; Amphiphysin OS=Mus musculus OX=10090 GN=Amph PE=1 SV=1; BAR domain-containing protein OS=Mus musculus OX=10090 GN=Amph PE=2 SV=1 0 2 2 0.6221 0 1 1 1 584.3136 1167.61992 1167.62072 -0.68 -0.0004 0/0 0 0 11080078 HCD 30 MS2 39.58175 814.5 110 68.3535 20481 20481 20476 QEplus033719.raw F4 785.5 546.6 864.9 909 763.2 1017.8 109 2.62 1 FALSE 3.35E-05 0.001273 0.64 -250 98834 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKAEPAAPQAPAK [K].akAEPAAPQAPAk.[S] N-Term(TMT6plex); K2(TMT6plex); K13(TMT6plex) 1 Q8CI43 Myosin light chain 6B OS=Mus musculus OX=10090 GN=Myl6b PE=1 SV=1 Q8CI43 Myosin light chain 6B OS=Mus musculus OX=10090 GN=Myl6b PE=1 SV=1 1 3 3 0.8141 0 1 1 1 646.39703 1937.17655 1937.17871 -1.11 -0.00072 0/0 0 0 3947907 HCD 30 MS2 0 367.3 110 68.3585 20483 20483 20476 QEplus033719.raw F4 423 148.8 339.4 582.8 219.8 490.2 303 6.51 1 FALSE 1.14E-05 6.31E-16 3.104 -250 98842 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTAGLTR [R].lTAGLTR.[G] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.1075 0 1 1 1 480.80545 960.60362 960.60395 -0.34 -0.00016 0/0 0 0 10955689 HCD 30 MS2 19.29083 855.4 110 68.361 20484 20484 20476 QEplus033719.raw F4 862.4 606.6 848.3 850.4 979.2 985.4 46 1.86 3 FALSE 0.002056 0.03701 0.186 -250 98852 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADIEEIR [K].aDIEEIR.[S] N-Term(TMT6plex) 3 P81117 Nucleobindin-2 OS=Mus musculus OX=10090 GN=Nucb2 PE=1 SV=2 P81117; Q3TV28; Q3UKN6 Nucleobindin-2 OS=Mus musculus OX=10090 GN=Nucb2 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nucb2 PE=2 SV=1; Nucleobindin-2 OS=Mus musculus OX=10090 GN=Nucb2 PE=1 SV=1 0 2 2 0.101 0 1 1 1 537.80273 1074.59819 1074.59925 -0.99 -0.00053 0/0 0 0 4852980.5 HCD 30 MS2 59.90723 1037.5 110 68.366 20486 20486 20476 QEplus033719.raw F4 1021.8 967.5 1097.7 741 1407.6 989.3 269 1.98 1 FALSE 0.001185 0.01627 0.318 -250 98874 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGYQQNFK [R].dGYQQNFk.[R] N-Term(TMT6plex); K8(TMT6plex) 7 Q60865 Caprin-1 OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=2 A2BH47; Q3TEY4; Q3TTW8; A1L0T9; Q8CD82; F6YP03; Q60865 Caprin-1 (Fragment) OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=1; Caprin-1_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Caprin1 PE=2 SV=1; Caprin-1_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Caprin1 PE=2 SV=1; Caprin1 protein (Fragment) OS=Mus musculus OX=10090 GN=Caprin1 PE=2 SV=1; Caprin-1_C domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Caprin1 PE=2 SV=1; Caprin-1 (Fragment) OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=1; Caprin-1 OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=2 0 3 3 0.3459 0 1 1 1 486.59811 1457.77979 1457.7789 0.61 0.0003 0/0 0 0 12643119 HCD 30 MS2 58.45449 1220.7 110 68.3804 20491 20491 20487 QEplus033719.raw F4 1739.8 864.5 1150.2 937.7 1479.1 1152.7 279 2.66 1 FALSE 0.002148 0.04055 0.172 -250 98881 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDEGCGACGGVQEELGR [R].gDEGcGAcGGVQEELGR.[L] N-Term(TMT6plex); C5(Carbamidomethyl); C8(Carbamidomethyl) 4 Q99K41 EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1 Q3UUU0; Q99K41; Q3U254; Q3USG5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; C1q domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1 0 2 2 0.9151 0 1 1 1 990.44281 1979.87834 1979.87485 1.76 0.00174 0/0 0 0 3481609.75 HCD 30 MS2 0 160 110 68.3829 20492 20492 20487 QEplus033719.raw F4 131.9 155.1 218.5 152.9 140.1 161.6 18 6.24 1 FALSE 1.14E-05 6.31E-16 3.62 -250 98896 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDAAPAASDSKPSSAEPAPSSK [K].sDAAPAASDSkPSSAEPAPSSk.[E] N-Term(TMT6plex); K11(TMT6plex); K22(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 0 4 4 0.5747 0 1 1 1 687.11823 2745.45107 2745.45098 0.03 0.00002 0/0 0 0 2813852 HCD 30 MS2 18.0491 180.9 110 68.3904 20495 20495 20487 QEplus033719.raw F4 174.5 168.6 200.8 152.4 221.7 167.4 440 4.82 1 FALSE 1.14E-05 2.74E-09 1.724 -250 98908 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAMTMGK [K].eAMTMGk.[L] N-Term(TMT6plex); K7(TMT6plex) 2 Q3TH34 DENN domain-containing protein 10 OS=Mus musculus OX=10090 GN=Dennd10 PE=1 SV=1 Q3TH34; Q9D8N2 DENN domain-containing protein 10 OS=Mus musculus OX=10090 GN=Dennd10 PE=1 SV=1; DENN domain-containing protein 10 OS=Mus musculus OX=10090 GN=Dennd10 PE=1 SV=2 0 2 2 0.494 0 1 1 1 613.33813 1225.66899 1225.66849 0.41 0.00025 0/0 0 0 4021208.5 HCD 30 MS2 0 696.1 110 68.3955 20497 20497 20487 QEplus033719.raw F4 683.8 600 745.5 619 790.3 738.3 186 2.51 1 FALSE 0.002343 0.04674 0.152 -250 98920 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CLIATGGTPR [K].cLIATGGTPR.[S] N-Term(TMT6plex); C1(Carbamidomethyl) 3 B1AU25 "Apoptosis-inducing factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Aifm1 PE=1 SV=1" B1AU25; Q9Z0X1-2; Q9Z0X1 "Apoptosis-inducing factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Aifm1 PE=1 SV=1; Isoform 2 of Apoptosis-inducing factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Aifm1; Apoptosis-inducing factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Aifm1 PE=1 SV=1" 0 2 2 0.5387 0 1 1 1 637.85889 1274.7105 1274.70882 1.31 0.00084 0/0 0 0 3487916 HCD 30 MS2 0 464.8 110 68.4078 20501 20501 20498 QEplus033719.raw F4 447.3 384.8 474.6 452.1 502.2 527.7 334 3.23 1 FALSE 1.14E-05 5.55E-06 1.096 -250 98942 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAQAQPIM [K].kAQAQPIM.[-] N-Term(TMT6plex); K1(TMT6plex) 5 Q3TJD4 ATP synthase subunit b OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1 Q3TJD4; Q9CQQ7; A0A0G2JGX3; Q64218; Q3UF04 "ATP synthase subunit b OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1; ATP synthase F(0) complex subunit B1, mitochondrial OS=Mus musculus OX=10090 GN=Atp5pb PE=1 SV=1; ATP synthase subunit b (Fragment) OS=Mus musculus OX=10090 GN=Atp5pb PE=1 SV=1; ATP synthase subunit b (Fragment) OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1; ATP synthase subunit b OS=Mus musculus OX=10090 GN=Atp5pb PE=2 SV=1" 1 3 3 0.4662 0 1 1 1 448.94022 1344.80609 1344.80736 -0.94 -0.00042 0/0 0 0 5616041 HCD 30 MS2 55.5821 588.2 110 68.4151 20504 20504 20498 QEplus033719.raw F4 576 475.6 593.2 407.5 772.3 704.4 396 2.66 1 FALSE 0.0006035 0.008874 0.423 -250 98946 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IRDQMAATEQDK [K].iRDQMAATEQDk.[T] N-Term(TMT6plex); K12(TMT6plex) 1 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 1 2 2 0.6253 0 1 1 1 932.50403 1864.00078 1863.99987 0.49 0.00046 0/0 0 0 4078054.25 HCD 30 MS2 0 368.9 110 68.4177 20505 20505 20498 QEplus033719.raw F4 409.6 139.8 285.9 636 139.8 602.3 412 3.79 1 FALSE 1.14E-05 6.77E-11 2.029 -250 98977 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVVFGK [K].hVVFGk.[VI] N-Term(TMT6plex); K6(TMT6plex) 12 P24369; Q3UAJ1; Q3UWH9; P30412 Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus OX=10090 GN=Ppib PE=1 SV=2;Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1;Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1;Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus OX=10090 GN=Ppic PE=1 SV=1 P24369; Q3TE63; Q3UAJ1; Q3UWH9; P30412; Q5SVY2; Q9CZK9; Q9D868; A0A1L1SST0; Q4G0C5; A2BGI8; Q3UY37 Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus OX=10090 GN=Ppib PE=1 SV=2; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus OX=10090 GN=Ppic PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase (Fragment) OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1 0 3 3 0.8426 0 1 1 1 382.24631 1144.72437 1144.72429 0.07 0.00003 0/0 0 0 428486528 HCD 30 MS2 4.643406 401.4 2.301 68.4348 20511 20511 20509 QEplus033719.raw F4 381 335.6 425.1 310.3 514 442.6 223 2.16 4 FALSE 0.004139 0.07608 0.072 -250 99008 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAINEVVTR [R].sAINEVVTR.[E] N-Term(TMT6plex) 5 P62900 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1 P62900; Q9CY93; A0A0A6YXL3; A0A0A6YX26; Q58DZ1 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=2 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1; 60S ribosomal protein L31 OS=Mus musculus OX=10090 GN=Rpl31 PE=1 SV=1; Rpl31 protein OS=Mus musculus OX=10090 GN=Rpl31 PE=2 SV=1 0 2 2 0.41 0 1 1 1 609.35602 1217.70476 1217.70512 -0.29 -0.00018 0/0 0 0 56275600 HCD 30 MS2 53.20098 932.1 17.069 68.4444 20515 20515 20509 QEplus033719.raw F4 922.9 787.6 1023.6 750.2 1105.1 1003.5 409 3 1 FALSE 1.14E-05 6.81E-05 0.889 -250 99050 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVAVITSDGR [R].tVAVITSDGR.[M] N-Term(TMT6plex) 1 Q6ZWM4 U6 snRNA-associated Sm-like protein LSm8 OS=Mus musculus OX=10090 GN=Lsm8 PE=1 SV=3 Q6ZWM4 U6 snRNA-associated Sm-like protein LSm8 OS=Mus musculus OX=10090 GN=Lsm8 PE=1 SV=3 0 2 2 0.4435 0 1 1 1 624.36023 1247.71318 1247.71568 -2 -0.00125 0/0 0 0 6013988.5 HCD 30 MS2 58.14871 912.9 110 68.4614 20521 20521 20520 QEplus033719.raw F4 896 802.1 1033 778.5 1012.9 954.8 401 3.45 1 FALSE 1.14E-05 5.57E-07 1.286 -250 99058 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQYESVAAK [R].qQYESVAAk.[N] N-Term(TMT6plex); K9(TMT6plex) 8 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.5258 0 1 1 1 741.42145 1481.83562 1481.83641 -0.54 -0.0004 0/0 0 0 6320783.5 HCD 30 MS2 0 356.5 110 68.4639 20522 20522 20520 QEplus033719.raw F4 297.4 411.6 280 247.4 623.2 279.5 433 3.1 2 FALSE 1.14E-05 5.77E-06 1.093 -250 99066 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MTAMDNASK [R].mTAMDNASk.[N] N-Term(TMT6plex); K9(TMT6plex) 5 Q8C2Q8; A2AKU9 ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1;ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1 Q9ERA8; Q8C2Q8; Q9D9D7; Q3UD06; A2AKU9 ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=2 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=2 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1 0 3 3 0.6755 0 1 1 1 476.25293 1426.74424 1426.74344 0.56 0.00026 0/0 0 0 30457984 HCD 30 MS2 9.245255 822.5 62.735 68.4662 20523 20523 20520 QEplus033719.raw F4 815.2 582.5 881.6 876.2 712.1 1067.5 201 3.02 2 FALSE 0.0001603 0.003793 0.533 -250 99089 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALEKEEEEEK [R].aLEkEEEEEk.[Q] N-Term(TMT6plex); K4(TMT6plex); K10(TMT6plex) 4 A0A6Q6PUT5 Pre-mRNA-processing factor 40 homolog A (Fragment) OS=Mus musculus OX=10090 GN=Prpf40a PE=1 SV=1 A0A6Q6PUT5; Q9R1C7-2; A0A1B0GRU8; Q9R1C7 Pre-mRNA-processing factor 40 homolog A (Fragment) OS=Mus musculus OX=10090 GN=Prpf40a PE=1 SV=1; Isoform 2 of Pre-mRNA-processing factor 40 homolog A OS=Mus musculus OX=10090 GN=Prpf40a; Pre-mRNA-processing factor 40 homolog A OS=Mus musculus OX=10090 GN=Prpf40a PE=1 SV=1; Pre-mRNA-processing factor 40 homolog A OS=Mus musculus OX=10090 GN=Prpf40a PE=1 SV=1 1 3 3 0.2881 0 1 1 1 641.02997 1921.07535 1921.0733 1.07 0.00068 0/0 0 0 9312564 HCD 30 MS2 20.61416 969.6 110 68.4732 20526 20526 20520 QEplus033719.raw F4 918.4 958.8 1100.8 747.8 1101.9 989.7 464 1.77 1 FALSE 0.0002218 0.004529 0.513 -250 99105 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGTCAAQVDALNSEK [K].hGTcAAQVDALNSEk.[K] N-Term(TMT6plex); C4(Carbamidomethyl); K15(TMT6plex) 3 A0A338P7E3 Ribonuclease T2-B OS=Mus musculus OX=10090 GN=Rnaset2b PE=1 SV=1 A0A338P7E3; A0A338P711; Q5FWA0 Ribonuclease T2-B OS=Mus musculus OX=10090 GN=Rnaset2b PE=1 SV=1; Ribonuclease T2-B (Fragment) OS=Mus musculus OX=10090 GN=Rnaset2b PE=1 SV=1; Ribonuclease T2B OS=Mus musculus OX=10090 GN=Rnaset2b PE=1 SV=1 0 3 3 0.4682 0 1 1 1 687.02655 2059.0651 2059.06426 0.41 0.00028 0/0 0 0 4644360 HCD 30 MS2 40.87065 227 110 68.4782 20528 20528 20520 QEplus033719.raw F4 238.1 206.7 226.2 190.9 284.9 215.4 287 4.72 1 FALSE 1.14E-05 2.90E-10 1.909 -250 99119 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSPGEAGSAGPAGPPGLR [R].gSPGEAGSAGPAGPPGLR.[G] N-Term(TMT6plex) 3 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.8304 0 1 1 1 882.46783 1763.92839 1763.92378 2.62 0.00231 0/0 0 0 3845263 HCD 30 MS2 0 99.5 110 68.4833 20530 20530 20520 QEplus033719.raw F4 88.9 140.4 117.3 55.5 101.4 93.4 304 4.6 1 FALSE 1.14E-05 6.31E-16 3.454 -250 99123 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELGTVMR [K].eLGTVMR.[MS] N-Term(TMT6plex) 4 P20801; P0DP27 "Troponin C, skeletal muscle OS=Mus musculus OX=10090 GN=Tnnc2 PE=1 SV=2;Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1" P20801; Q3UZY7; P0DP27; Q3UKW2 "Troponin C, skeletal muscle OS=Mus musculus OX=10090 GN=Tnnc2 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tnnc2 PE=2 SV=1; Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=1 SV=1" 0 2 2 0.3985 0 1 1 1 517.79755 1034.58782 1034.58658 1.19 0.00062 0/0 0 0 238143392 HCD 30 MS2 34.92278 743.9 3.884 68.4906 20532 20532 20531 QEplus033719.raw F4 710.3 579.6 825.5 671.1 831.3 845.9 247 2.61 2 FALSE 0.0006294 0.009676 0.41 -250 99153 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQPTSLPK [K].tQPTSLPk.[Q] N-Term(TMT6plex); K8(TMT6plex) 7 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; P27546-3; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 2 2 0.5269 0 1 1 1 665.41028 1329.81328 1329.81422 -0.71 -0.00047 0/0 0 0 31929294 HCD 30 MS2 26.65467 969 64.623 68.5001 20536 20536 20531 QEplus033719.raw F4 991.5 742.3 1055.1 1181.5 906.5 936.9 351 2.79 2 FALSE 1.14E-05 0.0006544 0.699 -250 99160 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNTNEIYSGK [R].dNTNEIYSGk.[F] N-Term(TMT6plex); K10(TMT6plex) 2 P09055 Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 P09055-2; P09055 Isoform 2 of Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1; Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 0 2 2 0.7651 0 1 1 1 799.92731 1598.84734 1598.84262 2.95 0.00236 0/0 0 0 6668283.5 HCD 30 MS2 14.63227 461.5 110 68.5026 20537 20537 20531 QEplus033719.raw F4 473.1 363.6 516.1 470.8 483 462.4 299 4.13 1 FALSE 1.14E-05 1.66E-08 1.575 -250 99173 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVCDVAEK [R].tVcDVAEk.[G] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 3 Q9DBG5 Perilipin-3 OS=Mus musculus OX=10090 GN=Plin3 PE=1 SV=1 Q9DBG5; A0A3B2WCW2; Q2XSQ4 Perilipin-3 OS=Mus musculus OX=10090 GN=Plin3 PE=1 SV=1; Perilipin-3 (Fragment) OS=Mus musculus OX=10090 GN=Plin3 PE=1 SV=1; Perilipin OS=Mus musculus OX=10090 GN=Plin3 PE=2 SV=1 0 2 2 0.336 0 1 1 1 690.38586 1379.76445 1379.76047 2.88 0.00199 0/0 0 0 6497108.5 HCD 30 MS2 28.44972 525.5 110 68.5076 20539 20539 20531 QEplus033719.raw F4 562.1 469.6 569.9 398.9 641.4 511.2 399 2.47 1 FALSE 1.14E-05 0.0002118 0.795 -250 99178 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQEATEGTMATLR [R].sQEATEGTMATLR.[C] N-Term(TMT6plex) 5 A0A1W2P6H1 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2 A0A1W2P6H1; H7BX05; A2AAJ9; E9QQ96; Z4YJE4 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Obscurin OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3 0 2 2 0.7551 0 1 1 1 812.41644 1623.82561 1623.82095 2.87 0.00233 0/0 0 0 5745966 HCD 30 MS2 0 264.9 110 68.5102 20540 20540 20531 QEplus033719.raw F4 286.4 94.7 240.2 374.6 161.2 432.2 230 4.9 1 FALSE 1.14E-05 8.53E-13 2.39 -250 99186 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASLQSGSRPGQEGEGGLK [R].aSLQSGSRPGQEGEGGLk.[H] N-Term(TMT6plex); K18(TMT6plex) 1 Q8R409 Protein HEXIM1 OS=Mus musculus OX=10090 GN=Hexim1 PE=1 SV=1 Q8R409 Protein HEXIM1 OS=Mus musculus OX=10090 GN=Hexim1 PE=1 SV=1 0 3 3 0.5396 0 1 1 1 739.40192 2216.1912 2216.20353 -5.56 -0.00411 0/0 0 0 4806923.5 HCD 30 MS2 39.34388 294.9 110 68.5127 20541 20541 20531 QEplus033719.raw F4 294.4 315.4 330.8 219.7 304.1 305.1 412 2.65 1 FALSE 1.14E-05 9.71E-10 1.81 -250 99195 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VITEEEK [R].vITEEEk.[N] N-Term(TMT6plex); K7(TMT6plex) 1 P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 P47963 60S ribosomal protein L13 OS=Mus musculus OX=10090 GN=Rpl13 PE=1 SV=3 0 2 2 0.4263 0 1 1 1 653.38708 1305.76689 1305.7666 0.22 0.00014 0/0 0 0 213278592 HCD 30 MS2 6.682518 876.1 8.702 68.52 20543 20543 20542 QEplus033719.raw F4 815.8 748.1 934 732 1019.5 1007.1 452 3.12 1 FALSE 0.0006477 0.009951 0.405 -250 99204 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSSLGK [K].vSSLGk.[ND] N-Term(TMT6plex); K6(TMT6plex) 6 Q9DCT8 Cysteine-rich protein 2 OS=Mus musculus OX=10090 GN=Crip2 PE=1 SV=1 E9Q860; A0A0R4J1I1; Q6Q6R3-2; Q6Q6R3; Q6Q6R3-3; Q9DCT8 Cysteine-rich protein 3 OS=Mus musculus OX=10090 GN=Crip3 PE=4 SV=1; Cysteine-rich protein 3 OS=Mus musculus OX=10090 GN=Crip3 PE=4 SV=1; Isoform 2 of Cysteine-rich protein 3 OS=Mus musculus OX=10090 GN=Crip3; Cysteine-rich protein 3 OS=Mus musculus OX=10090 GN=Crip3 PE=2 SV=1; Isoform 3 of Cysteine-rich protein 3 OS=Mus musculus OX=10090 GN=Crip3; Cysteine-rich protein 2 OS=Mus musculus OX=10090 GN=Crip2 PE=1 SV=1 0 2 2 0.2121 0 1 1 1 524.84167 1048.67607 1048.67667 -0.57 -0.0003 0/0 0 0 37175820 HCD 30 MS2 61.02427 1154.1 25.821 68.5247 20545 20545 20542 QEplus033719.raw F4 1452.9 952.5 1319.8 936.5 1205.3 1057.5 66 2.31 1 FALSE 0.003759 0.07138 0.084 -250 99214 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEEEFKK [R].tEEEFkk.[F] N-Term(TMT6plex); K6(TMT6plex); K7(TMT6plex) 1 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 1 3 3 0.1197 0 1 1 1 533.31909 1597.94272 1597.94043 1.43 0.00076 0/0 0 0 17323558 HCD 30 MS2 32.52285 1615.7 66.598 68.5292 20547 20547 20542 QEplus033719.raw F4 1626 1264.9 1588.3 1584.2 1955.8 1674.9 318 1.17 1 FALSE 0.005324 0.0913 0.031 -250 99223 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQYQNITVCR [K].dQYQNITVcR.[H] N-Term(TMT6plex); C9(Carbamidomethyl) 2 P27641 X-ray repair cross-complementing protein 5 OS=Mus musculus OX=10090 GN=Xrcc5 PE=1 SV=4 Q9CRI5; P27641 Ku_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Xrcc5 PE=2 SV=3; X-ray repair cross-complementing protein 5 OS=Mus musculus OX=10090 GN=Xrcc5 PE=1 SV=4 0 2 2 0.7494 0 1 1 1 763.38531 1525.76335 1525.76304 0.2 0.00016 0/0 0 0 6032880.5 HCD 30 MS2 15.16791 319.3 110 68.5318 20548 20548 20542 QEplus033719.raw F4 325.4 291.7 355 252.9 370.2 320.8 126 4.15 1 FALSE 1.14E-05 6.82E-05 0.889 -250 99231 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QICCCSVGK [KR].qIcccSVGk.[A] N-Term(TMT6plex); C3(Carbamidomethyl); C4(Carbamidomethyl); C5(Carbamidomethyl); K9(TMT6plex) 5 A0A3Q4EGK3 Latent-transforming growth factor beta-binding protein 1 OS=Mus musculus OX=10090 GN=Ltbp1 PE=1 SV=1 Q8CG19-3; Q8CG19-2; A0A3Q4EGK3; B1B1E2; Q8CG19 Isoform 3 of Latent-transforming growth factor beta-binding protein 1 OS=Mus musculus OX=10090 GN=Ltbp1; Isoform Short of Latent-transforming growth factor beta-binding protein 1 OS=Mus musculus OX=10090 GN=Ltbp1; Latent-transforming growth factor beta-binding protein 1 OS=Mus musculus OX=10090 GN=Ltbp1 PE=1 SV=1; Latent-transforming growth factor beta-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ltbp1 PE=1 SV=8; Latent-transforming growth factor beta-binding protein 1 OS=Mus musculus OX=10090 GN=Ltbp1 PE=1 SV=2 0 2 2 0.694 0 1 1 1 785.40118 1569.79509 1569.79516 -0.04 -0.00003 0/0 0 0 3839731.25 HCD 30 MS2 0 323.8 110 68.5368 20550 20550 20542 QEplus033719.raw F4 307.6 322.3 364.2 282.2 350.5 316.1 174 3.17 1 FALSE 1.14E-05 0.0004092 0.739 -250 99232 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLCCCSVGK [KR].qLcccSVGk.[A] N-Term(TMT6plex); C3(Carbamidomethyl); C4(Carbamidomethyl); C5(Carbamidomethyl); K9(TMT6plex) 3 Q61810-2; Q6KAT1; Q61810 Isoform 2 of Latent-transforming growth factor beta-binding protein 3 OS=Mus musculus OX=10090 GN=Ltbp3; MFLJ00070 protein (Fragment) OS=Mus musculus OX=10090 GN=mFLJ00070 PE=4 SV=1; Latent-transforming growth factor beta-binding protein 3 OS=Mus musculus OX=10090 GN=Ltbp3 PE=1 SV=4 0 2 2 0.694 0 1 2 2 785.40118 1569.79509 1569.79516 -0.04 -0.00003 0/0 0 0 3839731.25 HCD 30 MS2 0 323.8 110 68.5368 20550 20550 20542 QEplus033719.raw F4 307.6 322.3 364.2 282.2 350.5 316.1 174 3.17 1 FALSE 1.14E-05 0.0004092 0.739 -250 99246 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQAVQQLK [R].sQAVQQLk.[V] N-Term(TMT6plex); K8(TMT6plex) 5 Q8CFK5 Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1 Q8CFK5; Q8C292; Q8C1V4; Q8R2P8; Q3TIV6 Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=1 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=1 SV=1 0 2 2 0.4262 0 1 1 1 680.42194 1359.8366 1359.83602 0.42 0.00029 0/0 0 0 35732896 HCD 30 MS2 29.34278 806.5 38.729 68.5487 20554 20554 20553 QEplus033719.raw F4 844.5 654.5 827.6 613.8 1026.5 872.1 557 3.66 1 FALSE 1.14E-05 7.83E-05 0.877 -250 99253 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPSELNGEASK [R].kPSELNGEASk.[S] N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex) 22 A2APM3 CD44 antigen OS=Mus musculus OX=10090 GN=Cd44 PE=1 SV=1 Q3TLT9; A2APM3; P15379-10; P15379-6; Q80X37; P15379-3; P15379-4; A2APM4; A2APM2; Q3UNN2; P15379-2; E9QKM8; Q3U468; P15379-9; P15379; P15379-8; A2APM1; A2APM5; P15379-5; P15379-11; P15379-7; Q3U8S1 CD44 antigen OS=Mus musculus OX=10090 GN=Cd44 PE=2 SV=1; CD44 antigen OS=Mus musculus OX=10090 GN=Cd44 PE=1 SV=1; Isoform 8 of CD44 antigen OS=Mus musculus OX=10090 GN=Cd44; Isoform 7 of CD44 antigen OS=Mus musculus OX=10090 GN=Cd44; CD44 antigen OS=Mus musculus OX=10090 GN=Cd44 PE=1 SV=1; Isoform 12 of CD44 antigen OS=Mus musculus OX=10090 GN=Cd44; Isoform 4 of CD44 antigen OS=Mus musculus OX=10090 GN=Cd44; CD44 antigen OS=Mus musculus OX=10090 GN=Cd44 PE=1 SV=1; CD44 antigen OS=Mus musculus OX=10090 GN=Cd44 PE=1 SV=1; CD44 antigen OS=Mus musculus OX=10090 GN=Cd44 PE=2 SV=1; Isoform 13 of CD44 antigen OS=Mus musculus OX=10090 GN=Cd44; CD44 antigen OS=Mus musculus OX=10090 GN=Cd44 PE=1 SV=1; CD44 antigen OS=Mus musculus OX=10090 GN=Cd44 PE=2 SV=1; Isoform 5 of CD44 antigen OS=Mus musculus OX=10090 GN=Cd44; CD44 antigen OS=Mus musculus OX=10090 GN=Cd44 PE=1 SV=3; Isoform 3 of CD44 antigen OS=Mus musculus OX=10090 GN=Cd44; CD44 antigen OS=Mus musculus OX=10090 GN=Cd44 PE=1 SV=1; CD44 antigen OS=Mus musculus OX=10090 GN=Cd44 PE=1 SV=1; Isoform 6 of CD44 antigen OS=Mus musculus OX=10090 GN=Cd44; Isoform 9 of CD44 antigen OS=Mus musculus OX=10090 GN=Cd44; Isoform 2 of CD44 antigen OS=Mus musculus OX=10090 GN=Cd44; CD44 antigen OS=Mus musculus OX=10090 GN=Cd44 PE=1 SV=1 0 3 3 0.6544 0 1 1 1 616.36829 1847.09031 1847.08414 3.34 0.00206 0/0 0 0 15878758 HCD 30 MS2 16.88957 983.4 91.473 68.5509 20555 20555 20553 QEplus033719.raw F4 1017 1019.4 1004.1 675.1 1279 905.6 387 4.08 1 FALSE 1.14E-05 1.75E-10 1.951 -250 99308 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCAVSNLK [K].scAVSNLk.[K] N-Term(TMT6plex); C2(Carbamidomethyl); K8(TMT6plex) 2 Q8K009 Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=2 D3Z6B9; Q8K009 Formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=1; Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=2 0 2 2 0.3722 0 1 1 1 668.88715 1336.76702 1336.76589 0.84 0.00056 0/0 0 0 7626423.5 HCD 30 MS2 12.7083 760.9 110 68.5683 20562 20562 20553 QEplus033719.raw F4 829.5 662.7 858.4 650 789.7 774.8 415 3.17 1 FALSE 1.14E-05 7.81E-05 0.878 -250 99325 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MTAMDNASK [R].mTAMDNASk.[N] N-Term(TMT6plex); K9(TMT6plex) 5 Q8C2Q8; A2AKU9 ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1;ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1 Q9ERA8; Q8C2Q8; Q9D9D7; Q3UD06; A2AKU9 ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=2 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=2 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1 0 2 2 0.6962 0 1 1 1 713.87561 1426.74394 1426.74344 0.35 0.00025 0/0 0 0 54662408 HCD 30 MS2 5.823454 800 38.427 68.5781 20565 20565 20564 QEplus033719.raw F4 735.7 580.1 881.1 958.5 623.3 1021.3 193 3.72 2 FALSE 1.14E-05 7.76E-06 1.068 -250 99354 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASLQSGSRPGQEGEGGLK [R].aSLQSGSRPGQEGEGGLk.[H] N-Term(TMT6plex); K18(TMT6plex) 1 Q8R409 Protein HEXIM1 OS=Mus musculus OX=10090 GN=Hexim1 PE=1 SV=1 Q8R409 Protein HEXIM1 OS=Mus musculus OX=10090 GN=Hexim1 PE=1 SV=1 0 3 3 0.7162 0 1 1 1 739.40582 2216.20292 2216.20353 -0.28 -0.0002 0/0 0 0 11751166 HCD 30 MS2 0 404.4 110 68.5902 20570 20570 20564 QEplus033719.raw F4 373.9 424.1 486.8 280.8 444.6 416.1 401 3.77 1 FALSE 1.14E-05 1.01E-10 1.996 -250 99394 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQDAEIAR [K].lQDAEIAR.[L] N-Term(TMT6plex) 1 P14069 Protein S100-A6 OS=Mus musculus OX=10090 GN=S100a6 PE=1 SV=3 P14069 Protein S100-A6 OS=Mus musculus OX=10090 GN=S100a6 PE=1 SV=3 0 2 2 0.4236 0 1 1 1 572.83002 1144.65276 1144.65235 0.35 0.0002 0/0 0 0 634074688 HCD 30 MS2 5.403429 532.7 2.235 68.6075 20576 20576 20575 QEplus033719.raw F4 516.2 572.3 594.4 335.3 690.8 487.2 368 3.14 1 FALSE 1.14E-05 0.0005091 0.721 -250 99418 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LETPSAK [R].lETPSAk.[K] N-Term(TMT6plex); K7(TMT6plex) 2 P51174 "Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=2" A0A0R4J083; P51174 "Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=1; Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadl PE=1 SV=2" 0 2 2 0.0503 0 1 1 1 602.37103 1203.73479 1203.73491 -0.1 -0.00006 0/0 0 0 18814776 HCD 30 MS2 26.42818 980.6 59.617 68.6165 20580 20580 20575 QEplus033719.raw F4 946.4 845.4 976.5 964.6 1091.9 1058.6 631 1.99 1 FALSE 0.004449 0.0798 0.062 -250 99432 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSLSPEQDIK [K].hSLSPEQDIk.[F] N-Term(TMT6plex); K10(TMT6plex) 2 Q9R0X4 "Acyl-coenzyme A thioesterase 9, mitochondrial OS=Mus musculus OX=10090 GN=Acot9 PE=1 SV=1" Q32MW3; Q9R0X4 "Acyl-coenzyme A thioesterase 10, mitochondrial OS=Mus musculus OX=10090 GN=Acot10 PE=2 SV=1; Acyl-coenzyme A thioesterase 9, mitochondrial OS=Mus musculus OX=10090 GN=Acot9 PE=1 SV=1" 0 3 3 0.6053 0 1 1 1 537.97595 1611.9133 1611.91064 1.65 0.00089 0/0 0 0 8778093 HCD 30 MS2 50.38532 1205 103.36 68.6214 20582 20582 20575 QEplus033719.raw F4 1281.6 962.5 1315.4 1062.1 1226.8 1381.6 389 4.18 1 FALSE 1.14E-05 1.05E-06 1.233 -250 99460 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIDNPDYK [R].qIDNPDYk.[G] N-Term(TMT6plex); K8(TMT6plex) 2 B2MWM9 Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 Q3UWP8; B2MWM9 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Calr PE=2 SV=1; Calreticulin OS=Mus musculus OX=10090 GN=Calr PE=1 SV=1 0 2 2 0.6135 0 1 1 1 725.90173 1450.79619 1450.79422 1.36 0.00099 0/0 0 0 83708832 HCD 30 MS2 16.36899 813.2 20.173 68.636 20587 20587 20586 QEplus033719.raw F4 770.3 558 885.6 835.5 831.6 998.4 379 3.26 1 FALSE 1.14E-05 0.0003072 0.763 -250 99482 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDIHLAK [K].qDIHLAk.[R] N-Term(TMT6plex); K7(TMT6plex) 6 J3QJX3 Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=1 Q80YC0; J3QJX3; Q5DTL8; Q9Z2G6; Q6GTY4; Q6PFR3 Sel1l protein (Fragment) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1; Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=1; MKIAA4137 protein (Fragment) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1; Protein sel-1 homolog 1 OS=Mus musculus OX=10090 GN=Sel1l PE=1 SV=2; Sel-1 suppressor of lin-12-like (C. elegans) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1; Sel1l protein (Fragment) OS=Mus musculus OX=10090 GN=Sel1l PE=2 SV=1 0 3 3 0.2947 0 1 1 1 428.26785 1282.78901 1282.78834 0.52 0.00022 0/0 0 0 3869746.25 HCD 30 MS2 72.39938 510.2 110 68.6453 20591 20591 20586 QEplus033719.raw F4 596 409.8 561.2 404.8 528.2 561.3 208 2.85 1 FALSE 0.0003496 0.006883 0.46 -250 99488 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQTSNVTNK [K].iQTSNVTNk.[N] N-Term(TMT6plex); K9(TMT6plex) 6 Q64012-2 Isoform 1 of RNA-binding protein Raly OS=Mus musculus OX=10090 GN=Raly Q64012; Q64012-2; A2AU60; A2AU62; A2AU61; Q3TGD3 RNA-binding protein Raly OS=Mus musculus OX=10090 GN=Raly PE=1 SV=3; Isoform 1 of RNA-binding protein Raly OS=Mus musculus OX=10090 GN=Raly; RNA-binding protein Raly (Fragment) OS=Mus musculus OX=10090 GN=Raly PE=1 SV=1; RNA-binding protein Raly (Fragment) OS=Mus musculus OX=10090 GN=Raly PE=1 SV=1; RNA-binding protein Raly (Fragment) OS=Mus musculus OX=10090 GN=Raly PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Raly PE=2 SV=1 0 3 3 0.4011 0 1 1 1 488.29266 1462.86344 1462.86296 0.32 0.00016 0/0 0 0 30227828 HCD 30 MS2 30.81899 821.4 48.516 68.6476 20592 20592 20586 QEplus033719.raw F4 761.8 773.9 918.4 578.4 978 918 396 3.59 1 FALSE 2.26E-05 0.001108 0.653 -250 99505 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPDPNIK [K].kPDPNIk.[N] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 3 Q6PDL0 Cytoplasmic dynein 1 light intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1li2 PE=1 SV=2 A0A1D5RM94; A0A1D5RMC1; Q6PDL0 Dynein light intermediate chain OS=Mus musculus OX=10090 GN=Dync1li2 PE=1 SV=1; Dynein light intermediate chain (Fragment) OS=Mus musculus OX=10090 GN=Dync1li2 PE=1 SV=1; Cytoplasmic dynein 1 light intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1li2 PE=1 SV=2 0 3 3 0.5088 0 1 1 1 500.32404 1498.95755 1498.95603 1.02 0.00051 0/0 0 0 14992550 HCD 30 MS2 47.78081 1477 83.318 68.6521 20594 20594 20586 QEplus033719.raw F4 1774.1 1052.6 1375.4 1067 1941.2 1651.9 190 2.28 1 FALSE 0.008151 0.138 -0.072 -250 99521 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THQVSAAPTSSAGDGFK [R].tHQVSAAPTSSAGDGFk.[A] N-Term(TMT6plex); K17(TMT6plex) 2 P32020 Sterol carrier protein 2 OS=Mus musculus OX=10090 GN=Scp2 PE=1 SV=3 P32020; P32020-2 Sterol carrier protein 2 OS=Mus musculus OX=10090 GN=Scp2 PE=1 SV=3; Isoform SCP2 of Sterol carrier protein 2 OS=Mus musculus OX=10090 GN=Scp2 0 3 3 0.7981 0 1 1 1 707.04572 2119.12259 2119.1184 1.98 0.0014 0/0 0 0 3624275 HCD 30 MS2 25.50285 224.4 110 68.6571 20596 20596 20586 QEplus033719.raw F4 221.9 190 231.3 255.2 219.6 228.7 367 6.19 1 FALSE 1.14E-05 5.37E-14 2.618 -250 99527 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLTPPEGSSK [R].qLTPPEGSSk.[S] N-Term(TMT6plex); K10(TMT6plex) 2 Q8R1B4 Eukaryotic translation initiation factor 3 subunit C OS=Mus musculus OX=10090 GN=Eif3c PE=1 SV=1 Q8R1B4; Q66JU1 Eukaryotic translation initiation factor 3 subunit C OS=Mus musculus OX=10090 GN=Eif3c PE=1 SV=1; Eif3c protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3c PE=2 SV=1 0 2 2 0.4505 0 1 1 1 751.43567 1501.86406 1501.86263 0.95 0.00072 0/0 0 0 5972822.5 HCD 30 MS2 0 344.6 110 68.6645 20598 20598 20597 QEplus033719.raw F4 370.1 291.5 353.2 290.6 397.1 365.3 433 2.93 1 FALSE 1.14E-05 1.51E-05 1.013 -250 99544 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAEVESVK [K].aAEVESVk.[E] N-Term(TMT6plex); K8(TMT6plex) 3 P27546 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 P27546; P27546-2; P27546-3 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 0 2 2 0.4437 0 1 1 1 645.88751 1290.76775 1290.76694 0.63 0.0004 0/0 0 0 38411900 HCD 30 MS2 28.89542 1283.5 45.771 68.6692 20600 20600 20597 QEplus033719.raw F4 1420.1 999.7 1267 1259.6 1435.4 1319.3 522 2.93 1 FALSE 1.14E-05 9.58E-05 0.861 -250 99551 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSSPATLNSR [K].lSSPATLNSR.[V] N-Term(TMT6plex) 1 P00761 SWISS-PROT:P00761 Trypsin - Sus scrofa (Pig). P00761 SWISS-PROT:P00761 Trypsin - Sus scrofa (Pig). 0 2 2 0.3642 0 1 1 1 637.86768 1274.72807 1274.72658 1.17 0.00075 0/0 0 0 22703246 HCD 30 MS2 14.51666 1139.2 80.689 68.6715 20601 20601 20597 QEplus033719.raw F4 1136 1083.2 1226.4 925.3 1199.8 1264.6 391 3.24 1 TRUE 4.43E-05 0.001605 0.619 -250 99561 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIQACGNPK [K].vIQAcGNPk.[V] N-Term(TMT6plex); C5(Carbamidomethyl); K9(TMT6plex) 3 Q9QZF2 Glypican-1 OS=Mus musculus OX=10090 GN=Gpc1 PE=1 SV=1 Q3U3U3; Q8CD04; Q9QZF2 Glypican-1 (Fragment) OS=Mus musculus OX=10090 GN=Gpc1 PE=2 SV=1; Glypican-1 (Fragment) OS=Mus musculus OX=10090 GN=Gpc1 PE=2 SV=1; Glypican-1 OS=Mus musculus OX=10090 GN=Gpc1 PE=1 SV=1 0 3 3 0.5293 0 1 1 1 482.2832 1444.83506 1444.83464 0.29 0.00014 0/0 0 0 16859872 HCD 30 MS2 24.06211 973.6 76.492 68.6738 20602 20602 20597 QEplus033719.raw F4 1032.2 731.2 1075 881.6 1097.8 1023.8 382 3.76 1 FALSE 5.44E-05 0.002151 0.591 -250 99567 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAEVESVK [K].aAEVESVk.[E] N-Term(TMT6plex); K8(TMT6plex) 3 P27546 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 P27546; P27546-2; P27546-3 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 0 3 3 0.2088 0 1 1 1 430.92761 1290.76828 1290.76694 1.04 0.00045 0/0 0 0 7926986.5 HCD 30 MS2 32.24665 872.6 110 68.6763 20603 20603 20597 QEplus033719.raw F4 875.4 773.4 941 618.3 870.5 1157.2 517 2.73 1 FALSE 0.0002814 0.005659 0.486 -250 99573 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGPVKPQSPEEEK [R].dGPVkPQSPEEEk.[A] N-Term(TMT6plex); K5(TMT6plex); K13(TMT6plex) 2 A0A068BIT0 Solute carrier family 39 OS=Mus musculus OX=10090 GN=Slc39a7 PE=1 SV=1 A0A068BIT0; Q14C53 "Solute carrier family 39 OS=Mus musculus OX=10090 GN=Slc39a7 PE=1 SV=1; Solute carrier family 39 (Zinc transporter), member 7 OS=Mus musculus OX=10090 GN=Slc39a7 PE=2 SV=1" 0 3 3 0.7427 0 1 1 1 709.7381 2127.19974 2127.19006 4.55 0.00323 0/0 0 0 4411243 HCD 30 MS2 8.954812 543.5 110 68.6788 20604 20604 20597 QEplus033719.raw F4 548.3 455.1 629.2 474.9 551 602.5 474 3.77 1 FALSE 1.14E-05 1.23E-09 1.79 -250 99583 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FASEAEDK [K].fASEAEDk.[V] N-Term(TMT6plex); K8(TMT6plex) 3 Q8BMJ2 "Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2" Q6ZPT2; Q8BMJ2; Q99JK2 "Leucyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1; Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2; Lars protein OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1" 0 2 2 0.5474 0 1 1 1 677.86816 1354.72905 1354.72547 2.65 0.00179 0/0 0 0 37672812 HCD 30 MS2 15.65891 1111.3 47.314 68.6811 20605 20605 20597 QEplus033719.raw F4 1163 901 1190.5 976.6 1187.1 1249.6 288 2.85 1 FALSE 1.14E-05 0.0007065 0.693 -250 99598 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQGASPVAMQK [R].gQGASPVAMQk.[A] N-Term(TMT6plex); K11(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 3 3 0.6681 0 1 1 1 511.29361 1531.86628 1531.86667 -0.26 -0.00013 0/0 0 0 12712618 HCD 30 MS2 24.93184 1532.1 95.47 68.6856 20607 20607 20597 QEplus033719.raw F4 1605.7 1015.2 1545.7 1646.1 1498 1881.8 422 4.67 1 FALSE 1.14E-05 1.33E-09 1.783 -250 99643 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DEEVLK [K].dEEVLk.[K] N-Term(TMT6plex); K6(TMT6plex) 4 Q9Z1N5 Spliceosome RNA helicase Ddx39b OS=Mus musculus OX=10090 GN=Ddx39b PE=1 SV=1 Q9Z1N5; A0A1S6GWH2; G3UXI6; Q3TB18 Spliceosome RNA helicase Ddx39b OS=Mus musculus OX=10090 GN=Ddx39b PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39b PE=2 SV=1; Spliceosome RNA helicase Ddx39b (Fragment) OS=Mus musculus OX=10090 GN=Ddx39b PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39b PE=2 SV=1 0 2 2 0.1659 0 1 1 2 595.85626 1190.70525 1190.70328 1.66 0.00099 0/0 0 0 7856474 HCD 30 MS2 19.69909 1036.3 110 68.7047 20614 20614 20608 QEplus033719.raw F4 1065.2 793.9 1055.1 884.9 1225.9 1192.5 431 2.23 1 FALSE 0.002836 0.05546 0.126 -250 99651 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MPINNK [K].mPINNk.[M] N-Term(TMT6plex); K6(TMT6plex) 2 P48774 Glutathione S-transferase Mu 5 OS=Mus musculus OX=10090 GN=Gstm5 PE=1 SV=1 P48774; E9PV63 Glutathione S-transferase Mu 5 OS=Mus musculus OX=10090 GN=Gstm5 PE=1 SV=1; Glutathione transferase OS=Mus musculus OX=10090 GN=Gstm5 PE=1 SV=1 0 2 2 0.3069 0 1 1 1 587.85425 1174.70122 1174.70184 -0.52 -0.00031 0/0 0 0 6324882 HCD 30 MS2 44.10644 1115.5 110 68.7072 20615 20615 20608 QEplus033719.raw F4 1118.6 847.9 1199.2 1081.8 1085.4 1360 315 1.89 1 FALSE 0.004206 0.07703 0.069 -250 99659 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLQGEVEK [K].kLQGEVEk.[Y] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 2 Q03958 Prefoldin subunit 6 OS=Mus musculus OX=10090 GN=Pfdn6 PE=1 SV=1 Q03958; A0A3Q4EBT3 Prefoldin subunit 6 OS=Mus musculus OX=10090 GN=Pfdn6 PE=1 SV=1; Prefoldin subunit 6 OS=Mus musculus OX=10090 GN=Pfdn6 PE=1 SV=1 1 3 3 0.5274 0 1 1 1 540.01001 1618.01548 1618.01427 0.75 0.0004 0/0 0 0 20353542 HCD 30 MS2 21.79382 1688.9 91.252 68.7095 20616 20616 20608 QEplus033719.raw F4 1877.8 1403.3 1690.1 1453.9 2052.8 1655.4 387 3.47 1 FALSE 1.14E-05 6.93E-05 0.887 -250 99666 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKAEPAAPQAPAK [K].akAEPAAPQAPAk.[S] N-Term(TMT6plex); K2(TMT6plex); K13(TMT6plex) 1 Q8CI43 Myosin light chain 6B OS=Mus musculus OX=10090 GN=Myl6b PE=1 SV=1 Q8CI43 Myosin light chain 6B OS=Mus musculus OX=10090 GN=Myl6b PE=1 SV=1 1 4 4 0.7071 0 1 1 1 485.04974 1937.17714 1937.17871 -0.81 -0.00039 0/0 0 0 16541332 HCD 30 MS2 36.5643 924.3 93.31 68.7117 20617 20617 20608 QEplus033719.raw F4 1024.2 432.2 893.3 1293.2 678.8 1224.2 301 5.19 1 FALSE 1.14E-05 6.37E-06 1.085 -250 99672 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNTNEIYSGK [R].dNTNEIYSGk.[F] N-Term(TMT6plex); K10(TMT6plex) 2 P09055 Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 P09055-2; P09055 Isoform 2 of Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1; Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 0 3 3 0.6417 0 1 1 1 533.61963 1598.84433 1598.84262 1.07 0.00057 0/0 0 0 16059406 HCD 30 MS2 61.93423 1506.8 90.905 68.714 20618 20618 20608 QEplus033719.raw F4 1476.1 1117 1507.1 1452.1 1801.1 1687.2 277 2.4 1 FALSE 5.44E-05 0.00223 0.588 -250 99678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIQACGNPK [K].vIQAcGNPk.[V] N-Term(TMT6plex); C5(Carbamidomethyl); K9(TMT6plex) 3 Q9QZF2 Glypican-1 OS=Mus musculus OX=10090 GN=Gpc1 PE=1 SV=1 Q3U3U3; Q8CD04; Q9QZF2 Glypican-1 (Fragment) OS=Mus musculus OX=10090 GN=Gpc1 PE=2 SV=1; Glypican-1 (Fragment) OS=Mus musculus OX=10090 GN=Gpc1 PE=2 SV=1; Glypican-1 OS=Mus musculus OX=10090 GN=Gpc1 PE=1 SV=1 0 2 2 0.6166 0 1 1 1 722.92157 1444.83586 1444.83464 0.85 0.00061 0/0 0 0 22453714 HCD 30 MS2 4.451727 864.5 110 68.7213 20620 20620 20619 QEplus033719.raw F4 872.1 557.5 1085.5 822.7 862.9 986.5 373 3.86 1 FALSE 1.14E-05 1.98E-06 1.181 -250 99689 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEQSEAQLGR [K].lEQSEAQLGR.[G] N-Term(TMT6plex) 1 O35864 COP9 signalosome complex subunit 5 OS=Mus musculus OX=10090 GN=Cops5 PE=1 SV=3 O35864 COP9 signalosome complex subunit 5 OS=Mus musculus OX=10090 GN=Cops5 PE=1 SV=3 0 2 2 0.4526 0 1 1 1 680.37573 1359.74419 1359.74296 0.9 0.00061 0/0 0 0 29939072 HCD 30 MS2 42.26186 822 54.708 68.7259 20622 20622 20619 QEplus033719.raw F4 851.4 637.6 854.7 689.5 999.6 898.9 316 3.27 1 FALSE 1.14E-05 0.000313 0.762 -250 99698 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAETLYK [K].qAETLYk.[E] N-Term(TMT6plex); K7(TMT6plex) 14 Q5UE59 Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1 Q7M6Z7; Q7M701; Q7M700; Q5UE59; Q7M703; Q8CD76; F6UYN4; A0A5F8MPZ2; Q7M6Z8; Q7M6Z6; Q7M6Z9; E9Q7C9; Q7M702; Q7TNF4 Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1; Kinesin light chain 1 (Fragment) OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain (Fragment) OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1 0 2 2 0.4556 0 1 1 1 655.8902 1310.77312 1310.77202 0.84 0.00055 0/0 0 0 9811448 HCD 30 MS2 42.55033 1055.1 110 68.7284 20623 20623 20619 QEplus033719.raw F4 1048 757.7 1192.8 1094.5 937.4 1300.4 294 2.7 1 FALSE 0.002064 0.03781 0.183 -250 99705 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLDEQYQK [K].kLDEQYQk.[Y] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 3 P61759 Prefoldin subunit 3 OS=Mus musculus OX=10090 GN=Vbp1 PE=1 SV=2 P61759; A3KMJ8; Q3TIR6 Prefoldin subunit 3 OS=Mus musculus OX=10090 GN=Vbp1 PE=1 SV=2; Vbp1 protein (Fragment) OS=Mus musculus OX=10090 GN=Vbp1 PE=2 SV=1; Prefoldin subunit 3 OS=Mus musculus OX=10090 GN=Vbp1 PE=1 SV=1 1 3 3 0.6163 0 1 1 1 580.34906 1739.03263 1739.03065 1.14 0.00066 0/0 0 0 9360482 HCD 30 MS2 29.71218 1288.2 110 68.7309 20624 20624 20619 QEplus033719.raw F4 1434.5 1109.2 1353 1082.1 1337 1413.3 356 3.44 1 FALSE 1.14E-05 4.18E-05 0.929 -250 99712 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVQCLNTSSK [K].aVQcLNTSSk.[E] N-Term(TMT6plex); C4(Carbamidomethyl); K10(TMT6plex) 5 A2AN08 E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1 A2AN08-3; Z4YLP1; A2AN08-5; F6SSP6; A2AN08 Isoform 3 of E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4; E3 ubiquitin-protein ligase UBR4 (Fragment) OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1; Isoform 5 of E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4; E3 ubiquitin-protein ligase UBR4 (Fragment) OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1; E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1 0 2 2 0.6711 0 1 1 1 783.43921 1565.87114 1565.87215 -0.64 -0.0005 0/0 0 0 7130305 HCD 30 MS2 12.50029 407.2 110 68.7334 20625 20625 20619 QEplus033719.raw F4 404.2 374.4 461.5 314.4 456.9 431.8 396 4.47 1 FALSE 1.14E-05 2.63E-07 1.347 -250 99720 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELGHGALAEK [R].eLGHGALAEk.[A] N-Term(TMT6plex); K10(TMT6plex) 5 Q3UNL5 Polynucleotide phosphorylase 1 OS=Mus musculus OX=10090 GN=Pnpt1 PE=2 SV=1 Q3UNL5; Q8K1R3-2; Q3TST0; Q8K1R3; Q3TN29 "Polynucleotide phosphorylase 1 OS=Mus musculus OX=10090 GN=Pnpt1 PE=2 SV=1; Isoform 2 of Polyribonucleotide nucleotidyltransferase 1, mitochondrial OS=Mus musculus OX=10090 GN=Pnpt1; Polynucleotide phosphorylase 1 OS=Mus musculus OX=10090 GN=Pnpt1 PE=2 SV=1; Polyribonucleotide nucleotidyltransferase 1, mitochondrial OS=Mus musculus OX=10090 GN=Pnpt1 PE=1 SV=1; Polynucleotide phosphorylase 1 OS=Mus musculus OX=10090 GN=Pnpt1 PE=2 SV=1" 0 3 3 0.6152 0 1 1 1 494.9628 1482.87384 1482.86805 3.91 0.00193 0/0 0 0 5949378.5 HCD 30 MS2 50.11374 816.3 110 68.7359 20626 20626 20619 QEplus033719.raw F4 816.7 643.5 868.5 682.7 962.3 924.3 341 3.69 1 FALSE 1.14E-05 6.69E-06 1.081 -250 99730 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SALVDEK [R].sALVDEk.[D] N-Term(TMT6plex); K7(TMT6plex) 2 Q80Y14 "Glutaredoxin-related protein 5, mitochondrial OS=Mus musculus OX=10090 GN=Glrx5 PE=1 SV=2" Q3UF85; Q80Y14 "Glutaredoxin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Glrx5 PE=2 SV=1; Glutaredoxin-related protein 5, mitochondrial OS=Mus musculus OX=10090 GN=Glrx5 PE=1 SV=2" 0 2 2 0.2899 0 1 1 1 610.36835 1219.72942 1219.72982 -0.33 -0.0002 0/0 0 0 14480719 HCD 30 MS2 47.78973 1492.3 85.166 68.7404 20628 20628 20619 QEplus033719.raw F4 1562.8 1147.8 1534.8 1418.3 1553.4 1736.4 516 2.76 1 FALSE 0.0002719 0.005446 0.491 -250 99744 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FVTGNK [R].fVTGNk.[I] N-Term(TMT6plex); K6(TMT6plex) 2 Q5BLJ7 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1 Q921R2; Q5BLJ7 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1; 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1 0 2 2 0.4764 0 1 1 1 562.34802 1123.68877 1123.68757 1.07 0.0006 0/0 0 0 147239696 HCD 30 MS2 6.946067 1113.7 10.602 68.7503 20631 20631 20630 QEplus033719.raw F4 1084.4 803.4 1161.9 1059.2 1377.1 1195.9 138 1.91 1 FALSE 0.009211 0.1691 -0.107 -250 99754 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAGESESNLRK [K].lAGESESNLRk.[A] N-Term(TMT6plex); K11(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 1 3 3 0.6228 0 1 1 1 554.65839 1661.96061 1661.95865 1.17 0.00065 0/0 0 0 73574568 HCD 30 MS2 27.36986 848.4 17.36 68.7525 20632 20632 20630 QEplus033719.raw F4 804.5 722.3 970.1 713.2 960.1 920.5 443 3.34 1 FALSE 1.14E-05 7.17E-06 1.075 -250 99759 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYEEIVK [K].rYEEIVk.[E] N-Term(TMT6plex); K7(TMT6plex) 6 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 1 3 3 0.1676 0 1 1 1 465.6188 1394.84186 1394.84077 0.78 0.00036 0/0 0 0 141491264 HCD 30 MS2 7.070532 735.1 9.438 68.7548 20633 20633 20630 QEplus033719.raw F4 796 581.7 835.5 655.6 736.9 805.1 330 3.4 1 FALSE 1.14E-05 4.94E-05 0.915 -250 99767 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVYVDK [K].qVYVDk.[VL] N-Term(TMT6plex); K6(TMT6plex) 9 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 F6YMV1; Q571M2; Q61316; Q3U2G2; F6QYS7; Q99L75; Q8VHG2; Q8VHG2-2; A0A067XG49 Angiomotin (Fragment) OS=Mus musculus OX=10090 GN=Amot PE=1 SV=1; Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Angiomotin (Fragment) OS=Mus musculus OX=10090 GN=Amot PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Angiomotin OS=Mus musculus OX=10090 GN=Amot PE=1 SV=3; Isoform 2 of Angiomotin OS=Mus musculus OX=10090 GN=Amot; Angiomotin OS=Mus musculus OX=10090 GN=Amot PE=1 SV=1 0 2 2 0.2295 0 1 1 1 605.36627 1209.72527 1209.72434 0.76 0.00046 0/0 0 0 81022680 HCD 30 MS2 37.92768 1194 24.3 68.7571 20634 20634 20630 QEplus033719.raw F4 1187.2 986.3 1305.9 1082.9 1289.7 1312.2 295 2.44 1 FALSE 0.005081 0.08761 0.041 -250 99796 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IASNSATAFR [K].iASNSATAFR.[V] N-Term(TMT6plex) 5 E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" A0A087WS16; Q05504; J3QQ16; O88493; E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen alpha 3 chain type VI (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Type VI collagen alpha 3 subunit OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" 0 2 2 0.6333 0 1 1 1 633.85254 1266.6978 1266.70037 -2.02 -0.00128 0/0 0 0 15409387 HCD 30 MS2 41.30819 1467.3 110 68.7641 20637 20637 20630 QEplus033719.raw F4 1400.2 1353.8 1666.5 1145.7 1680.4 1557.3 334 3.6 1 FALSE 1.14E-05 2.86E-05 0.961 -250 99806 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GINGVSPK [R].gINGVSPk.[V] N-Term(TMT6plex); K8(TMT6plex) 4 P14148 60S ribosomal protein L7 OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=2 P14148; Q3TK73; Q3UBI6; F6XI62 60S ribosomal protein L7 OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl7 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl7 PE=2 SV=1; 60S ribosomal protein L7 (Fragment) OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=1 0 2 2 0.4 0 1 1 1 615.38562 1229.76396 1229.76179 1.77 0.00109 0/0 0 0 12429258 HCD 30 MS2 13.44617 1105.6 110 68.7666 20638 20638 20630 QEplus033719.raw F4 1196.7 907.4 1218.6 938.9 1143.2 1228.9 304 2.3 1 FALSE 1.14E-05 0.0002893 0.768 -250 99813 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYEEIVK [K].rYEEIVk.[E] N-Term(TMT6plex); K7(TMT6plex) 6 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 1 2 2 0.3234 0 1 1 1 697.92462 1394.84197 1394.84077 0.86 0.0006 0/0 0 0 11071721 HCD 30 MS2 0 759.1 110 68.7691 20639 20639 20630 QEplus033719.raw F4 883 595.4 807.6 655.1 778.9 834.4 330 2.69 1 FALSE 0.001257 0.01716 0.308 -250 99821 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FGAPQK [K].fGAPQk.[N] N-Term(TMT6plex); K6(TMT6plex) 2 Q8BMS1 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1" Q8BMS1; Q3TB39 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1; 3HCDH_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hadha PE=2 SV=1" 0 3 3 0.243 0 1 1 1 369.23026 1105.67621 1105.677 -0.71 -0.00026 0/0 0 0 8195516.5 HCD 30 MS2 51.67274 457.3 110 68.7716 20640 20640 20630 QEplus033719.raw F4 443.3 342.7 492.5 462.3 403.9 598.9 190 2.14 1 FALSE 0.008074 0.135 -0.067 -250 99829 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WGTDEEK [K].wGTDEEk.[F] N-Term(TMT6plex); K7(TMT6plex) 2 P48036 Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 A0A0G2JGQ0; P48036 Annexin A5 (Fragment) OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1; Annexin A5 OS=Mus musculus OX=10090 GN=Anxa5 PE=1 SV=1 0 2 2 0.4647 0 1 1 1 661.85364 1322.7 1322.69925 0.56 0.00037 0/0 0 0 46315216 HCD 30 MS2 16.60555 1026.9 32.936 68.7789 20642 20642 20641 QEplus033719.raw F4 974 972.1 1127.8 826.2 1295.3 965.9 271 2.69 1 FALSE 0.0007626 0.01073 0.393 -250 99836 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEFTVETR [R].aEFTVETR.[S] N-Term(TMT6plex) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; B7FAV1; F6XC15; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.5696 0 1 1 1 591.32227 1181.63725 1181.63637 0.75 0.00044 0/0 0 0 17302858 HCD 30 MS2 22.4229 1012.3 89.509 68.7812 20643 20643 20641 QEplus033719.raw F4 1058.5 864.4 1078.1 808.7 1208.6 1055.4 180 2.37 1 FALSE 0.0001401 0.003195 0.552 -250 99845 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLGEVWR [R].rLGEVWR.[G] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 1 3 3 0.2476 0 1 1 1 382.23135 1144.67951 1144.67884 0.58 0.00022 0/0 0 0 45013652 HCD 30 MS2 55.55954 422.9 14.027 68.7857 20645 20645 20641 QEplus033719.raw F4 468.1 307.8 433.5 370.9 486.1 471 307 2.06 1 FALSE 0.003928 0.07335 0.079 -250 99853 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLDCLK [K].rLDcLk.[S] N-Term(TMT6plex); C4(Carbamidomethyl); K6(TMT6plex) 3 Q9EST5 Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Mus musculus OX=10090 GN=Anp32b PE=1 SV=1 Q9EST5; Q3UW32; Q9EST5-2 Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Mus musculus OX=10090 GN=Anp32b PE=1 SV=1; LRRcap domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Anp32b PE=2 SV=1; Isoform 2 of Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Mus musculus OX=10090 GN=Anp32b 1 3 3 0.2868 0 1 1 1 421.5939 1262.76715 1262.7655 1.31 0.00055 0/0 0 0 31976298 HCD 30 MS2 21.82788 801.8 38.312 68.788 20646 20646 20641 QEplus033719.raw F4 843.7 831.8 886.6 551.4 980.1 717.3 412 2.65 1 FALSE 0.0005848 0.008729 0.426 -250 99862 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTYPAK [R].vTYPAk.[A] N-Term(TMT6plex); K6(TMT6plex) 4 Q3U505 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Rpn2 PE=2 SV=1 Q3U505; Q9DBG6; A2ACG7; Q61833 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Rpn2 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Mus musculus OX=10090 GN=Rpn2 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Mus musculus OX=10090 GN=Rpn2 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Mus musculus OX=10090 GN=Rpn2 PE=2 SV=1 0 2 2 0.4069 0 1 1 1 568.8584 1136.70952 1136.70797 1.37 0.00078 0/0 0 0 27584882 HCD 30 MS2 40.22677 1333.5 46.77 68.7902 20647 20647 20641 QEplus033719.raw F4 1233.6 1277.8 1400.9 1080.6 1630.9 1377.3 140 2.31 1 FALSE 0.003405 0.06563 0.099 -250 99881 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLAVNPQNR [K].vLAVNPQNR.[A] N-Term(TMT6plex) 3 Q64378 Peptidyl-prolyl cis-trans isomerase FKBP5 OS=Mus musculus OX=10090 GN=Fkbp5 PE=1 SV=1 Q64378; A0A3B2WBD2; Q3TX72 Peptidyl-prolyl cis-trans isomerase FKBP5 OS=Mus musculus OX=10090 GN=Fkbp5 PE=1 SV=1; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp5 PE=1 SV=1; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp5 PE=2 SV=1 0 2 2 0.2863 0 1 1 1 620.37396 1239.74065 1239.73709 2.87 0.00178 0/0 0 0 8735336 HCD 30 MS2 29.5499 745 110 68.795 20649 20649 20641 QEplus033719.raw F4 740.5 726.3 822.8 576 829.4 774.7 272 2.62 1 FALSE 0.0001603 0.00375 0.534 -250 99891 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAHFVFR [K].aAHFVFR.[T] N-Term(TMT6plex) 7 E9QB01; A0A0A6YY47 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2;Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 E9QB01; P13595-3; P13595-2; A0A0A6YY91; A0A0A6YY47; P13595; E9Q589 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2; Isoform 3 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Isoform 2 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 (Fragment) OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=3; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 0 3 3 0.4371 0 1 1 1 359.54507 1076.62067 1076.62027 0.38 0.00013 0/0 0 0 8590397 HCD 30 MS2 0 199.8 110 68.7975 20650 20650 20641 QEplus033719.raw F4 188.2 126 237.7 187.7 175.1 284.1 247 3.02 2 FALSE 4.43E-05 0.001465 0.628 -250 99900 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQSVEQIR [R].vQSVEQIR.[E] N-Term(TMT6plex) 12 Q3UIX8; A0A0J9YUM4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctbp2 PE=2 SV=1;C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1 PE=1 SV=1 A0A0J9YTW3; O88712-2; Q3UIX8; P56546; A0A0J9YUM4; E9Q0T4; Q91YZ2; A0A0J9YU62; O88712-3; P56546-2; E9PWQ9; O88712 C-terminal-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ctbp1 PE=1 SV=1; Isoform 2 of C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctbp2 PE=2 SV=1; C-terminal-binding protein 2 OS=Mus musculus OX=10090 GN=Ctbp2 PE=1 SV=2; C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1 PE=1 SV=1; C-terminal-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Ctbp2 PE=1 SV=8; C-terminal-binding protein 2 OS=Mus musculus OX=10090 GN=Ctbp2 PE=1 SV=1; C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1 PE=1 SV=1; Isoform 3 of C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1; Isoform 2 of C-terminal-binding protein 2 OS=Mus musculus OX=10090 GN=Ctbp2; C-terminal-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Ctbp2 PE=1 SV=1; C-terminal-binding protein 1 OS=Mus musculus OX=10090 GN=Ctbp1 PE=1 SV=2 0 2 2 0.4862 0 1 1 1 594.35114 1187.69499 1187.69455 0.37 0.00022 0/0 0 0 7219575.5 HCD 30 MS2 10.80633 949.6 110 68.8 20651 20651 20641 QEplus033719.raw F4 965 794 1022 733.3 1070.2 1113.3 322 2.9 2 FALSE 5.44E-05 0.002187 0.59 -250 99917 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTMQNLNDR [KR].vTMQNLNDR.[L] N-Term(TMT6plex) 22 P13645 "SWISS-PROT:P13645 Tax_Id=9606 Gene_Symbol=KRT10 Keratin, type I cytoskeletal 10" Q9Z2K1; P13645; P02535-2; Q7Z3Y8; P02535-3; P02533; Q7Z3Y7; Q148H6; Q3ZAW8; Q7Z3Y9; B2RU72; Q8VCW2; A2A513; Q7Z3Z0; Q9EQD7; Q61414; A2A4G1; Q3ZAW8; Q9Z320; P02535-1; Q61781; P08779 "SWISS-PROT:Q9Z2K1 Tax_Id=10090 Gene_Symbol=Krt16 Keratin, type I cytoskeletal 16; SWISS-PROT:P13645 Tax_Id=9606 Gene_Symbol=KRT10 Keratin, type I cytoskeletal 10; Isoform 2 of Keratin, type I cytoskeletal 10 OS=Mus musculus OX=10090 GN=Krt10; SWISS-PROT:Q7Z3Y8 Tax_Id=9606 Gene_Symbol=KRT27 Keratin, type I cytoskeletal 27; Isoform 3 of Keratin, type I cytoskeletal 10 OS=Mus musculus OX=10090 GN=Krt10; SWISS-PROT:P02533 Tax_Id=9606 Gene_Symbol=KRT14 Keratin, type I cytoskeletal 14; SWISS-PROT:Q7Z3Y7 Tax_Id=9606 Gene_Symbol=KRT28 Keratin 25D; TREMBL:Q148H6 (Bos taurus) Hypothetical protein MGC139876; TREMBL:Q3ZAW8;Q9EQD6;Q9EQD7 Tax_Id=10090 Gene_Symbol=Krt16 Keratin intermediate filament 16a; SWISS-PROT:Q7Z3Y9 Tax_Id=9606 Gene_Symbol=KRT26 Keratin, type I cytoskeletal 26; Keratin 27 OS=Mus musculus OX=10090 GN=Krt27 PE=2 SV=1; Keratin, type I cytoskeletal 25 OS=Mus musculus OX=10090 GN=Krt25 PE=1 SV=1; Keratin, type I cytoskeletal 10 OS=Mus musculus OX=10090 GN=Krt10 PE=1 SV=1; SWISS-PROT:Q7Z3Z0 Tax_Id=9606 Gene_Symbol=KRT25 Keratin, type I cytoskeletal 25; Keratin intermediate filament 16b OS=Mus musculus OX=10090 GN=K16 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Mus musculus OX=10090 GN=Krt15 PE=1 SV=2; TREMBL:A2A4G1 Tax_Id=10090 Gene_Symbol=Krt15 Keratin complex 1, acidic, gene 15; Keratin 16 OS=Mus musculus OX=10090 GN=Krt16 PE=2 SV=1; Keratin, type I cytoskeletal 27 OS=Mus musculus OX=10090 GN=Krt27 PE=1 SV=1; SWISS-PROT:P02535-1 Tax_Id=10090 Gene_Symbol=Krt10 Isoform 1 of Keratin, type I cytoskeletal 10; Keratin, type I cytoskeletal 14 OS=Mus musculus OX=10090 GN=Krt14 PE=1 SV=2; SWISS-PROT:P08779 Tax_Id=9606 Gene_Symbol=KRT16 Keratin, type I cytoskeletal 16" 0 2 2 0.3221 0 1 1 1 660.35046 1319.69365 1319.6939 -0.19 -0.00012 0/0 0 0 36045904 HCD 30 MS2 23.25217 864.6 53.2 68.8121 20655 20655 20652 QEplus033719.raw F4 935.7 767.4 649.1 1118.5 929.6 787.3 268 3.57 1 TRUE 1.14E-05 1.93E-06 1.183 -250 99933 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIDLVEGDEGR [R].hIDLVEGDEGR.[M] N-Term(TMT6plex) 8 G3UVV4 Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1 Q3UE51; G3UVV4; Q3TJE3; P17710; P17710-2; P17710-4; Q6GQU1; Q3UPC4 Hexokinase (Fragment) OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=3; Isoform HK1-SB of Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1; Isoform HK1-SC of Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1 0 3 3 0.708 0 1 1 1 490.25797 1468.75934 1468.75934 0 0 0/0 0 0 21318492 HCD 30 MS2 38.61982 1152 85.228 68.8166 20657 20657 20652 QEplus033719.raw F4 1573.8 851.6 1270.2 1037.1 1066.4 1112.9 205 3.39 1 FALSE 1.14E-05 4.90E-06 1.106 -250 99942 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NGDLDEVK [K].nGDLDEVk.[D] N-Term(TMT6plex); K8(TMT6plex) 1 P62774 Myotrophin OS=Mus musculus OX=10090 GN=Mtpn PE=1 SV=2 P62774 Myotrophin OS=Mus musculus OX=10090 GN=Mtpn PE=1 SV=2 0 2 2 0.6006 0 1 1 1 674.38043 1347.75359 1347.75202 1.17 0.00079 0/0 0 0 17740930 HCD 30 MS2 13.02481 1198.5 85.588 68.8189 20658 20658 20652 QEplus033719.raw F4 1236.1 1162.5 1290.9 870.2 1503.7 1127.7 422 3.13 1 FALSE 1.14E-05 0.0001745 0.811 -250 99949 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FVQDTSK [K].fVQDTSk.[YF] N-Term(TMT6plex); K7(TMT6plex) 20 Q8CGB6; A0A087WQ94 Tensin-2 OS=Mus musculus OX=10090 GN=Tns2 PE=1 SV=1;Tensin 1 (Fragment) OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1 Q7TSV1; Q8CGB6; Q5SSZ5; A0A5F8MP98; Q9DBT6; A0A087WQ94; Q5SSZ5-2; Q8CGB6-4; E9Q0S6; A0A2R8VHQ0; A0A087WQM0; Q8CGB6-3; A0A6I8MWZ2; A0A5F8MPF2; A0A087WRU0; A0A1D5RM59; Q3U0Q9; Q7TPM8; Q8CGB6-2; A0A087WQS0 Tns1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tns1 PE=2 SV=1; Tensin-2 OS=Mus musculus OX=10090 GN=Tns2 PE=1 SV=1; Tensin-3 OS=Mus musculus OX=10090 GN=Tns3 PE=1 SV=1; Tensin-3 OS=Mus musculus OX=10090 GN=Tns3 PE=1 SV=1; Tensin 1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; Tensin 1 (Fragment) OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; Isoform 2 of Tensin-3 OS=Mus musculus OX=10090 GN=Tns3; Isoform 4 of Tensin-2 OS=Mus musculus OX=10090 GN=Tns2; Tensin 1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; Tensin-2 OS=Mus musculus OX=10090 GN=Tns2 PE=1 SV=1; Tensin 1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; Isoform 3 of Tensin-2 OS=Mus musculus OX=10090 GN=Tns2; Tensin 1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; Tensin-3 OS=Mus musculus OX=10090 GN=Tns3 PE=1 SV=1; Tensin 1 (Fragment) OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; Tensin 1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; SH2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tns1 PE=2 SV=1; Tns1 protein OS=Mus musculus OX=10090 GN=Tns1 PE=2 SV=1; Isoform 2 of Tensin-2 OS=Mus musculus OX=10090 GN=Tns2; Tensin 1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1 0 2 2 0.3727 0 1 1 1 641.8764 1282.74553 1282.74072 3.75 0.0024 0/0 0 0 13144348 HCD 30 MS2 18.65864 1292.6 110 68.8237 20660 20660 20652 QEplus033719.raw F4 1305.6 1236.6 1380.3 959.7 1614.3 1259.1 313 2.2 2 FALSE 0.001886 0.03187 0.208 -250 99994 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YGLNMCR [K].yGLNMcR.[Q] N-Term(TMT6plex); C6(Carbamidomethyl) 1 P62274 40S ribosomal protein S29 OS=Mus musculus OX=10090 GN=Rps29 PE=1 SV=2 P62274 40S ribosomal protein S29 OS=Mus musculus OX=10090 GN=Rps29 PE=1 SV=2 0 2 2 0.6567 0 1 1 1 571.78662 1142.56597 1142.5648 1.02 0.00058 0/0 0 0 71484016 HCD 30 MS2 47.51093 781.4 11.825 68.8405 20666 20666 20663 QEplus033719.raw F4 818.7 640.2 886.5 729.2 801 812.7 79 2.33 1 FALSE 0.001997 0.03515 0.193 -250 100009 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSSPATLNSR [K].lSSPATLNSR.[V] N-Term(TMT6plex) 1 P00761 SWISS-PROT:P00761 Trypsin - Sus scrofa (Pig). P00761 SWISS-PROT:P00761 Trypsin - Sus scrofa (Pig). 0 3 3 0.2663 0 1 1 1 425.58051 1274.72696 1274.72658 0.3 0.00013 0/0 0 0 13252212 HCD 30 MS2 46.11781 782.7 110 68.8455 20668 20668 20663 QEplus033719.raw F4 899.3 472.5 842.4 525.4 600.7 1356 396 3.38 1 TRUE 0.0004091 0.007321 0.452 -250 100024 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVVHLDVR [K].kVVHLDVR.[G] N-Term(TMT6plex); K1(TMT6plex) 3 B1AU25 "Apoptosis-inducing factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Aifm1 PE=1 SV=1" B1AU25; Q9Z0X1-2; Q9Z0X1 "Apoptosis-inducing factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Aifm1 PE=1 SV=1; Isoform 2 of Apoptosis-inducing factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Aifm1; Apoptosis-inducing factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Aifm1 PE=1 SV=1" 1 4 4 0.6066 0 1 1 1 356.73459 1423.91652 1423.91494 1.11 0.0004 0/0 0 0 7360403.5 HCD 30 MS2 15.95997 330.2 110 68.8505 20670 20670 20663 QEplus033719.raw F4 329.1 233.9 432.2 335.5 205.2 445.1 101 3.66 1 FALSE 1.14E-05 0.0004408 0.733 -250 100033 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNQEGTFVK [K].dNQEGTFVk.[W] N-Term(TMT6plex); K9(TMT6plex) 1 Q8R016 Bleomycin hydrolase OS=Mus musculus OX=10090 GN=Blmh PE=1 SV=1 Q8R016 Bleomycin hydrolase OS=Mus musculus OX=10090 GN=Blmh PE=1 SV=1 0 2 2 0.3681 0 1 1 1 748.4129 1495.81853 1495.81568 1.91 0.00143 0/0 0 0 15898065 HCD 30 MS2 11.38186 773.9 110 68.8555 20672 20672 20663 QEplus033719.raw F4 882.8 593.4 808.5 765.9 750.2 842.5 356 3.64 1 FALSE 1.14E-05 1.47E-06 1.206 -250 100042 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALLGGNVR [K].aLLGGNVR.[M] N-Term(TMT6plex) 3 Q9QUJ7 Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus OX=10090 GN=Acsl4 PE=1 SV=2 Q9QUJ7; Q9QUJ7-2; Q8BW44 Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus OX=10090 GN=Acsl4 PE=1 SV=2; Isoform Short of Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus OX=10090 GN=Acsl4; AMP-binding domain-containing protein OS=Mus musculus OX=10090 GN=Acsl4 PE=2 SV=1 0 2 2 0.3835 0 1 1 1 514.82495 1028.64263 1028.64139 1.2 0.00062 0/0 0 0 12106054 HCD 30 MS2 55.95757 1287.5 97.185 68.8578 20673 20673 20663 QEplus033719.raw F4 1549.9 872.2 1304.3 1204.3 1300.7 1493.8 154 2.79 1 FALSE 1.14E-05 0.0004657 0.728 -250 100052 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTEGCSFR [R].lTEGcSFR.[R] N-Term(TMT6plex); C5(Carbamidomethyl) 4 Q6ZWY3; Q6ZWU9 40S ribosomal protein S27-like OS=Mus musculus OX=10090 GN=Rps27l PE=1 SV=3;40S ribosomal protein S27 OS=Mus musculus OX=10090 GN=Rps27 PE=1 SV=3 Q6ZWY3; A0A0G2JEX7; Q6ZWU9; A0A0G2JDW7 40S ribosomal protein S27-like OS=Mus musculus OX=10090 GN=Rps27l PE=1 SV=3; 40S ribosomal protein S27 OS=Mus musculus OX=10090 GN=Rps27 PE=3 SV=1; 40S ribosomal protein S27 OS=Mus musculus OX=10090 GN=Rps27 PE=1 SV=3; 40S ribosomal protein S27 (Fragment) OS=Mus musculus OX=10090 GN=Rps27 PE=1 SV=1 0 2 2 0.5652 0 1 1 1 599.80847 1198.60967 1198.60877 0.74 0.00045 0/0 0 0 135208608 HCD 30 MS2 10.49831 614.4 8.303 68.8651 20675 20675 20674 QEplus033719.raw F4 511.3 526.7 731.5 501.1 689 726.6 121 2.99 2 FALSE 0.0002019 0.00409 0.525 -250 100058 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEFTVETR [R].aEFTVETR.[S] N-Term(TMT6plex) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; B7FAV1; F6XC15; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.4009 0 1 1 1 591.32336 1181.63945 1181.63637 2.61 0.00154 0/0 0 0 5060457.5 HCD 30 MS2 49.01515 880.4 110 68.8676 20676 20676 20674 QEplus033719.raw F4 877.8 721.1 938.3 751.5 1015.4 978.1 167 2.22 1 FALSE 0.0003996 0.007133 0.455 -250 100065 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQLYDK [R].tQLYDk.[Q] N-Term(TMT6plex); K6(TMT6plex) 5 Q99KF1 Transmembrane emp24 domain-containing protein 9 OS=Mus musculus OX=10090 GN=Tmed9 PE=1 SV=2 Q99KF1; Q3TFU8; A0A286YDS5; Q9CZL0; Q3U7N8 Transmembrane emp24 domain-containing protein 9 OS=Mus musculus OX=10090 GN=Tmed9 PE=1 SV=2; GOLD domain-containing protein OS=Mus musculus OX=10090 GN=Tmed9 PE=2 SV=1; Transmembrane emp24 domain-containing protein 9 OS=Mus musculus OX=10090 GN=Tmed9 PE=1 SV=1; GOLD domain-containing protein OS=Mus musculus OX=10090 GN=Tmed9 PE=2 SV=1; GOLD domain-containing protein OS=Mus musculus OX=10090 GN=Tmed9 PE=2 SV=1 0 2 2 0.417 0 1 1 1 613.36365 1225.72002 1225.71926 0.62 0.00038 0/0 0 0 71445744 HCD 30 MS2 44.23502 1329.2 24.575 68.8699 20677 20677 20674 QEplus033719.raw F4 1296.9 1071.8 1482.2 1157.6 1467.1 1499.8 271 2.35 1 FALSE 0.004038 0.07477 0.075 -250 100075 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSAQVLIR [K].tSAQVLIR.[F] N-Term(TMT6plex) 1 P45377 Aldose reductase-related protein 2 OS=Mus musculus OX=10090 GN=Akr1b8 PE=1 SV=2 P45377 Aldose reductase-related protein 2 OS=Mus musculus OX=10090 GN=Akr1b8 PE=1 SV=2 0 2 2 0.3219 0 1 1 1 558.85107 1116.69487 1116.69382 0.94 0.00052 0/0 0 0 32234658 HCD 30 MS2 18.96401 649.3 35.109 68.8721 20678 20678 20674 QEplus033719.raw F4 583.5 522.9 772.3 602.1 621.3 793.8 218 2.33 1 FALSE 3.35E-05 0.001272 0.641 -250 100083 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEQETQQPLR [K].lEQETQQPLR.[A] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.5805 0 1 1 1 735.90985 1470.81243 1470.81137 0.72 0.00053 0/0 0 0 17572552 HCD 30 MS2 13.46668 476.9 110 68.8747 20679 20679 20674 QEplus033719.raw F4 584.7 247.6 519.4 441.8 413.8 654.2 307 3.79 1 FALSE 1.14E-05 3.85E-07 1.316 -250 100096 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYSFTTTAER [-R].gYSFTTTAER.[E] N-Term(TMT6plex) 22 O89054; Q3UAF6 Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q6IWE2; Q3UCF8; Q3TSB7; Q9QZ83; O89054; Q3UAF6; Q3UD81; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; G3UZ07; Q3TIJ9; Q61276; Q3UBP6; E9Q5F4; Q3UBQ4; P63260; Q3U939; Q3UGS0; Q3U804 "Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 0 2 2 0.7111 0 1 1 1 681.34985 1361.69243 1361.68986 1.89 0.00128 0/0 0 0 12108551 HCD 30 MS2 52.32054 986.5 110 68.8794 20681 20681 20674 QEplus033719.raw F4 1021.2 964.7 1118.9 747.1 1183.8 883.3 168 3.98 2 FALSE 1.14E-05 1.77E-08 1.57 -250 100114 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YKPHPQISK [K].ykPHPQISk.[V] N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex) 2 Q9EP69 Phosphatidylinositol-3-phosphatase SAC1 OS=Mus musculus OX=10090 GN=Sacm1l PE=1 SV=1 Q9EP69; A0A5F8MPK9 Phosphatidylinositol-3-phosphatase SAC1 OS=Mus musculus OX=10090 GN=Sacm1l PE=1 SV=1; Phosphatidylinositol-3-phosphatase SAC1 OS=Mus musculus OX=10090 GN=Sacm1l PE=1 SV=1 0 4 4 0.4787 0 1 1 1 447.03189 1785.10573 1785.099 3.77 0.00168 0/0 0 0 5886607 HCD 30 MS2 41.91661 754.3 110 68.8842 20683 20683 20674 QEplus033719.raw F4 738.8 617.6 815.9 567.9 895.3 890.4 240 3.28 1 FALSE 0.003182 0.06234 0.108 -250 100135 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGCVYVK [R].eGcVYVk.[C] N-Term(TMT6plex); C3(Carbamidomethyl); K7(TMT6plex) 4 E9QP59 Inner nuclear membrane protein Man1 OS=Mus musculus OX=10090 GN=Lemd3 PE=1 SV=1 Q9WU40-2; E9QP59; Q9WU40; D3YU56 Isoform 2 of Inner nuclear membrane protein Man1 OS=Mus musculus OX=10090 GN=Lemd3; Inner nuclear membrane protein Man1 OS=Mus musculus OX=10090 GN=Lemd3 PE=1 SV=1; Inner nuclear membrane protein Man1 OS=Mus musculus OX=10090 GN=Lemd3 PE=1 SV=2; Inner nuclear membrane protein Man1 OS=Mus musculus OX=10090 GN=Lemd3 PE=1 SV=1 0 2 2 0.3267 0 1 1 1 656.8692 1312.73113 1312.73353 -1.83 -0.0012 0/0 0 0 4013089 HCD 30 MS2 0 557.4 110 68.8965 20687 20687 20685 QEplus033719.raw F4 560.6 447.2 625.1 491.7 585.1 635 268 2.02 1 FALSE 0.001266 0.0173 0.307 -250 100143 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FGAPQK [K].fGAPQk.[N] N-Term(TMT6plex); K6(TMT6plex) 2 Q8BMS1 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1" Q8BMS1; Q3TB39 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1; 3HCDH_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hadha PE=2 SV=1" 0 2 2 0.4244 0 1 1 1 553.34222 1105.67717 1105.677 0.15 0.00009 0/0 0 0 70724464 HCD 30 MS2 10.39595 948.2 17.997 68.8988 20688 20688 20685 QEplus033719.raw F4 876.6 732.7 1012.3 1008.2 856 1203.7 190 2.05 1 FALSE 0.006527 0.1045 -0.006 -250 100153 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQVDPQK [R].mQVDPQk.[Y] N-Term(TMT6plex); K7(TMT6plex) 5 Q3THU8 "Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=2 SV=1" Q3THU8; Q3UB63; Q3U995; G5E902; Q8VEM8 "Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=2 SV=1; Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=2 SV=1; Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=2 SV=1; Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=1 SV=1; Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=1 SV=1" 0 2 2 0.4689 0 1 1 1 652.37567 1303.74407 1303.74443 -0.28 -0.00018 0/0 0 0 27265954 HCD 30 MS2 10.65222 1221.5 66.42 68.9033 20690 20690 20685 QEplus033719.raw F4 1290.2 962.1 1330.3 1314.5 953.7 1478.5 413 2.73 1 FALSE 0.000565 0.008621 0.428 -250 100172 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QNEFSVVR [K].qNEFSVVR.[Q] N-Term(TMT6plex) 2 Q6P8X1 Sorting nexin-6 OS=Mus musculus OX=10090 GN=Snx6 PE=1 SV=2 A0A1W2P6Y0; Q6P8X1 Sorting nexin-6 OS=Mus musculus OX=10090 GN=Snx6 PE=1 SV=1; Sorting nexin-6 OS=Mus musculus OX=10090 GN=Snx6 PE=1 SV=2 0 2 2 0.524 0 1 1 1 604.33612 1207.66496 1207.66325 1.42 0.00086 0/0 0 0 12828764 HCD 30 MS2 16.54698 1024 110 68.9081 20692 20692 20685 QEplus033719.raw F4 1005.6 888.3 1103 898.9 1115.1 1133.1 371 2.71 1 FALSE 1.14E-05 0.0002427 0.783 -250 100191 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNQAFDVGRPK [K].gNQAFDVGRPk.[E] N-Term(TMT6plex); K11(TMT6plex) 3 B9EKB8 Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1 B9EKB8; B7ZWC4; Q07113 Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Cation-independent mannose-6-phosphate receptor OS=Mus musculus OX=10090 GN=Igf2r PE=1 SV=1 0 3 3 0.6455 0 1 1 1 549.65027 1646.93625 1646.93786 -0.98 -0.00054 0/0 0 0 6579379 HCD 30 MS2 14.28488 1166.2 110 68.9131 20694 20694 20685 QEplus033719.raw F4 1213.3 942.6 1300.4 963.9 1275.9 1300.9 430 3.3 1 FALSE 1.14E-05 3.63E-06 1.131 -250 100197 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQSIGTENTEENR [R].lQSIGTENTEENR.[R] N-Term(TMT6plex) 11 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 A0A0U1RPT5; Q9CPQ9; D3YWI1; A0A0U1RPN8; A6ZI47; D3YV98; A6ZI46; D3Z510; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart2 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=2; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 0 2 2 0.7339 0 1 1 1 860.43896 1719.87065 1719.87107 -0.24 -0.00021 0/0 0 0 7119501.5 HCD 30 MS2 0 266 110 68.9156 20695 20695 20685 QEplus033719.raw F4 288.5 131 242.6 370.6 154.1 409.2 195 4.96 1 FALSE 1.14E-05 1.19E-12 2.362 -250 100216 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTPEPGPLGATDER [K].gTPEPGPLGATDER.[H] N-Term(TMT6plex) 7 Q8CAJ7 Aspartyl aminopeptidase OS=Mus musculus OX=10090 GN=Dnpep PE=2 SV=1 A0A087WS31; Q8BPW9; Q8CAJ7; A0A087WSE6; Q3TVK3; Q3U3I6; Q9Z2W0 Aspartyl aminopeptidase (Fragment) OS=Mus musculus OX=10090 GN=Dnpep PE=1 SV=1; Aspartyl aminopeptidase OS=Mus musculus OX=10090 GN=Dnpep PE=1 SV=1; Aspartyl aminopeptidase OS=Mus musculus OX=10090 GN=Dnpep PE=2 SV=1; Aspartyl aminopeptidase (Fragment) OS=Mus musculus OX=10090 GN=Dnpep PE=1 SV=1; Aspartyl aminopeptidase OS=Mus musculus OX=10090 GN=Dnpep PE=1 SV=1; Aspartyl aminopeptidase OS=Mus musculus OX=10090 PE=2 SV=1; Aspartyl aminopeptidase OS=Mus musculus OX=10090 GN=Dnpep PE=1 SV=2 0 2 2 0.6918 0 1 1 1 813.41968 1625.83208 1625.83323 -0.71 -0.00058 0/0 0 0 9998174 HCD 30 MS2 0 346.9 110 68.9304 20700 20700 20696 QEplus033719.raw F4 382.5 276.6 340.2 285.7 435.2 360.9 229 4.38 1 FALSE 1.14E-05 1.97E-14 2.701 -250 100230 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FPGCMQGR [R].fPGcMQGR.[I] N-Term(TMT6plex); C4(Carbamidomethyl) 9 A0A0R4J0G0 Phosphoenolpyruvate carboxykinase (GTP) OS=Mus musculus OX=10090 GN=Pck2 PE=1 SV=1 A0A0R4J0G0; A0A2I3BQL9; A0A2I3BQC6; Q8R3X7; A0A2I3BRX1; A0A2I3BS39; Q8BH04; Q3TDE6; Q3UGF0 "Phosphoenolpyruvate carboxykinase (GTP) OS=Mus musculus OX=10090 GN=Pck2 PE=1 SV=1; Phosphoenolpyruvate carboxykinase (GTP) (Fragment) OS=Mus musculus OX=10090 GN=Pck2 PE=1 SV=1; Phosphoenolpyruvate carboxykinase [GTP], mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Pck2 PE=1 SV=1; Phosphoenolpyruvate carboxykinase (GTP) (Fragment) OS=Mus musculus OX=10090 GN=Pck2 PE=2 SV=1; Phosphoenolpyruvate carboxykinase (GTP) (Fragment) OS=Mus musculus OX=10090 GN=Pck2 PE=1 SV=1; Phosphoenolpyruvate carboxykinase (GTP) OS=Mus musculus OX=10090 GN=Pck2 PE=1 SV=1; Phosphoenolpyruvate carboxykinase [GTP], mitochondrial OS=Mus musculus OX=10090 GN=Pck2 PE=1 SV=1; Phosphoenolpyruvate carboxykinase (GTP) OS=Mus musculus OX=10090 GN=Pck2 PE=2 SV=1; Phosphoenolpyruvate carboxykinase (GTP) (Fragment) OS=Mus musculus OX=10090 GN=Pck2 PE=2 SV=1" 0 2 2 0.7192 0 1 1 1 591.28949 1181.5717 1181.5757 -3.38 -0.002 0/0 0 0 5971705.5 HCD 30 MS2 29.8404 802.5 110 68.9354 20702 20702 20696 QEplus033719.raw F4 839.5 645.7 839.5 691.2 890.2 908.8 96 2.03 1 FALSE 0.001615 0.02631 0.236 -250 100235 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTVVTGTLER [R].gTVVTGTLER.[G] N-Term(TMT6plex) 3 Q8BFR5 "Elongation factor Tu, mitochondrial OS=Mus musculus OX=10090 GN=Tufm PE=1 SV=1" Q8BFR5; Q8BFR5-2; A0A0U1RNQ6 "Elongation factor Tu, mitochondrial OS=Mus musculus OX=10090 GN=Tufm PE=1 SV=1; Isoform 2 of Elongation factor Tu, mitochondrial OS=Mus musculus OX=10090 GN=Tufm; Elongation factor Tu, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Tufm PE=1 SV=1" 0 2 2 0.5025 0 1 1 1 631.36908 1261.73088 1261.73133 -0.36 -0.00022 0/0 0 0 41085976 HCD 30 MS2 24.77204 782.2 25.834 68.9402 20704 20704 20696 QEplus033719.raw F4 817.9 610.9 824.9 697.8 781.8 959.6 441 4.04 1 FALSE 1.14E-05 1.29E-06 1.217 -250 100257 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDIAGR [R].iDIAGR.[D] N-Term(TMT6plex) 2 P61164 Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1 P61164; A0A494BB86 Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1; Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1 0 2 2 0.4097 0 1 1 1 437.27167 873.53606 873.53553 0.6 0.00026 0/0 0 0 1384843136 HCD 30 MS2 3.412404 525.3 0.941 68.9523 20708 20708 20707 QEplus033719.raw F4 432.5 394 637.2 480 559.6 648.5 114 2.27 1 FALSE 0.009681 0.1864 -0.123 -250 100258 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDIAGR [R].lDIAGR.[D] N-Term(TMT6plex) 2 Q5SW83 Uncharacterized protein OS=Mus musculus OX=10090 GN=Actr2 PE=1 SV=1 Q5SW83; Q8BMA4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Actr2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.4097 0 1 2 2 437.27167 873.53606 873.53553 0.6 0.00026 0/0 0 0 1384843136 HCD 30 MS2 3.412404 525.3 0.941 68.9523 20708 20708 20707 QEplus033719.raw F4 432.5 394 637.2 480 559.6 648.5 114 2.27 1 FALSE 0.009681 0.1864 -0.123 -250 100259 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDLAGR [R].lDLAGR.[D] N-Term(TMT6plex) 39 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61275; Q3UAF6; Q3UD81; Q3U122; E9Q1F2; Q3UAA9; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; Q3UAF7; G3UZ07; Q3TIJ9; P62737; P68134; Q61276; Q3UBP6; D3YZY0; A0A0U1RQ96; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=3 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 0 2 2 0.4097 0 1 3 3 437.27167 873.53606 873.53553 0.6 0.00026 0/0 0 0 1384843136 HCD 30 MS2 3.412404 525.3 0.941 68.9523 20708 20708 20707 QEplus033719.raw F4 432.5 394 637.2 480 559.6 648.5 114 2.27 4 FALSE 0.009681 0.1864 -0.123 -250 100267 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TILNNGK [K].tILNNGk.[T] N-Term(TMT6plex); K7(TMT6plex) 1 P16015 Carbonic anhydrase 3 OS=Mus musculus OX=10090 GN=Ca3 PE=1 SV=3 P16015 Carbonic anhydrase 3 OS=Mus musculus OX=10090 GN=Ca3 PE=1 SV=3 0 2 2 0.4943 0 1 1 1 609.38477 1217.76225 1217.76179 0.38 0.00023 0/0 0 0 47188212 HCD 30 MS2 19.9038 1016.2 27.465 68.9546 20709 20709 20707 QEplus033719.raw F4 1216.1 812.7 865.9 662 1751 789.3 579 2.65 1 FALSE 0.0004793 0.007639 0.446 -250 100277 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITQSEFDR [R].iTQSEFDR.[Q] N-Term(TMT6plex) 6 Q9JK48 Endophilin-B1 OS=Mus musculus OX=10090 GN=Sh3glb1 PE=1 SV=1 Q9JK48-3; A0A0G2JE45; Q9JK48; A0A0G2JEC4; Q9JK48-2; A0A0G2JF57 Isoform 3 of Endophilin-B1 OS=Mus musculus OX=10090 GN=Sh3glb1; Endophilin-B1 (Fragment) OS=Mus musculus OX=10090 GN=Sh3glb1 PE=1 SV=1; Endophilin-B1 OS=Mus musculus OX=10090 GN=Sh3glb1 PE=1 SV=1; Endophilin-B1 OS=Mus musculus OX=10090 GN=Sh3glb1 PE=1 SV=1; Isoform 2 of Endophilin-B1 OS=Mus musculus OX=10090 GN=Sh3glb1; Endophilin-B1 (Fragment) OS=Mus musculus OX=10090 GN=Sh3glb1 PE=1 SV=1 0 2 2 0.5271 0 1 1 1 612.82495 1224.64263 1224.64218 0.36 0.00022 0/0 0 0 53709076 HCD 30 MS2 36.55106 693.7 19.685 68.9569 20710 20710 20707 QEplus033719.raw F4 669.7 563.8 833.2 598.5 712.8 784 202 2.58 1 FALSE 1.14E-05 0.0003756 0.746 -250 100297 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FVQDTSK [K].fVQDTSk.[YF] N-Term(TMT6plex); K7(TMT6plex) 20 Q8CGB6; A0A087WQ94 Tensin-2 OS=Mus musculus OX=10090 GN=Tns2 PE=1 SV=1;Tensin 1 (Fragment) OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1 Q7TSV1; Q8CGB6; Q5SSZ5; A0A5F8MP98; Q9DBT6; A0A087WQ94; Q5SSZ5-2; Q8CGB6-4; E9Q0S6; A0A2R8VHQ0; A0A087WQM0; Q8CGB6-3; A0A6I8MWZ2; A0A5F8MPF2; A0A087WRU0; A0A1D5RM59; Q3U0Q9; Q7TPM8; Q8CGB6-2; A0A087WQS0 Tns1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tns1 PE=2 SV=1; Tensin-2 OS=Mus musculus OX=10090 GN=Tns2 PE=1 SV=1; Tensin-3 OS=Mus musculus OX=10090 GN=Tns3 PE=1 SV=1; Tensin-3 OS=Mus musculus OX=10090 GN=Tns3 PE=1 SV=1; Tensin 1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; Tensin 1 (Fragment) OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; Isoform 2 of Tensin-3 OS=Mus musculus OX=10090 GN=Tns3; Isoform 4 of Tensin-2 OS=Mus musculus OX=10090 GN=Tns2; Tensin 1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; Tensin-2 OS=Mus musculus OX=10090 GN=Tns2 PE=1 SV=1; Tensin 1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; Isoform 3 of Tensin-2 OS=Mus musculus OX=10090 GN=Tns2; Tensin 1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; Tensin-3 OS=Mus musculus OX=10090 GN=Tns3 PE=1 SV=1; Tensin 1 (Fragment) OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; Tensin 1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1; SH2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tns1 PE=2 SV=1; Tns1 protein OS=Mus musculus OX=10090 GN=Tns1 PE=2 SV=1; Isoform 2 of Tensin-2 OS=Mus musculus OX=10090 GN=Tns2; Tensin 1 OS=Mus musculus OX=10090 GN=Tns1 PE=1 SV=1 0 2 2 0.5022 0 1 1 1 641.87311 1282.73894 1282.74072 -1.39 -0.00089 0/0 0 0 24083444 HCD 30 MS2 0 1409.5 110 68.9617 20712 20712 20707 QEplus033719.raw F4 1417.5 1343.7 1495.1 1040.2 1795.8 1364.9 273 2.31 2 FALSE 0.002049 0.03643 0.188 -250 100328 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GINGVSPK [R].gINGVSPk.[V] N-Term(TMT6plex); K8(TMT6plex) 4 P14148 60S ribosomal protein L7 OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=2 P14148; Q3TK73; Q3UBI6; F6XI62 60S ribosomal protein L7 OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl7 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl7 PE=2 SV=1; 60S ribosomal protein L7 (Fragment) OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=1 0 3 3 0.4468 0 1 1 1 410.59222 1229.76212 1229.76179 0.27 0.00011 0/0 0 0 7761476 HCD 30 MS2 58.04093 635.3 110 68.9709 20716 20716 20707 QEplus033719.raw F4 619.4 478.6 698.8 522.7 689.6 802.9 363 3.29 1 FALSE 1.14E-05 4.20E-05 0.929 -250 100335 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQSNGPVTK [K].lQSNGPVTk.[K] N-Term(TMT6plex); K9(TMT6plex) 6 A0A286YDA2 Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1 A0A286YDA2; A0A286YDT3; A0A286YDV7; E9Q5C9; A0A286YCD1; E9Q5C9-2 Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 (Fragment) OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 (Fragment) OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Isoform 2 of Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 0 2 2 0.5945 0 1 1 1 701.42664 1401.84599 1401.84659 -0.42 -0.0003 0/0 0 0 7026577 HCD 30 MS2 13.48667 473.4 110 68.9734 20717 20717 20707 QEplus033719.raw F4 492.7 408.7 521.5 323.7 563.6 530.3 491 3.65 1 FALSE 1.14E-05 9.18E-07 1.244 -250 100344 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATNEVGSDTCACTVK [K].aTNEVGSDTcAcTVk.[F] N-Term(TMT6plex); C10(Carbamidomethyl); C12(Carbamidomethyl); K15(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A2AT70; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.7709 0 1 1 1 691.01251 2071.02298 2071.02001 1.44 0.00099 0/0 0 0 6500635.5 HCD 30 MS2 16.45132 389.8 110 68.9808 20719 20719 20718 QEplus033719.raw F4 459.5 190.2 406.6 481.5 253.4 547.6 200 5.63 2 FALSE 1.14E-05 2.19E-12 2.312 -250 100351 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYSCSMK [K].vYScSMk.[S] N-Term(TMT6plex); C4(Carbamidomethyl); K7(TMT6plex) 1 Q6PB66 "Leucine-rich PPR motif-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Lrpprc PE=1 SV=2" Q6PB66 "Leucine-rich PPR motif-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Lrpprc PE=1 SV=2" 0 2 2 0.6119 0 1 1 1 666.85681 1332.70635 1332.7056 0.56 0.00037 0/0 0 0 7186792 HCD 30 MS2 27.09341 716 110 68.9833 20720 20720 20718 QEplus033719.raw F4 699.5 553.1 867.5 691.2 577.7 907.3 251 2.68 1 FALSE 0.0002814 0.005762 0.484 -250 100365 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNLIQQK [R].nNLIQQk.[NT] N-Term(TMT6plex); K7(TMT6plex) 18 Q8CAQ1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Mbnl1 PE=2 SV=1 A0A0A6YWB0; A0A0A6YXP3; Q542D8; Q8C181; Q8C181-3; Q8CAQ1; Q8CHF5; D0EX61; A0A0A6YXL7; Q8BKS0; A0A2K6EDM5; A0A0A6YXE3; Q9JKP5; S4R267; G3X9Q0; A0A0A6YVV8; Q8C181-2; Q8C181-4 Muscleblind-like protein 1 OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1; Muscleblind-like protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mbnl3 PE=2 SV=1; Muscleblind-like protein 2 OS=Mus musculus OX=10090 GN=Mbnl2 PE=2 SV=2; Isoform 3 of Muscleblind-like protein 2 OS=Mus musculus OX=10090 GN=Mbnl2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mbnl1 PE=2 SV=1; MKIAA0428 protein (Fragment) OS=Mus musculus OX=10090 GN=Mbnl1 PE=2 SV=1; Muscleblind-like 2 isoform 3 OS=Mus musculus OX=10090 GN=Mbnl2 PE=2 SV=1; Muscleblind-like protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Mbnl3 PE=2 SV=1; Muscleblind-like protein 2 OS=Mus musculus OX=10090 GN=Mbnl2 PE=1 SV=1; Muscleblind-like protein 1 OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1; Muscleblind-like protein 1 OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1; Muscleblind-like protein 3 OS=Mus musculus OX=10090 GN=Mbnl3 PE=1 SV=1; Muscleblind-like protein 1 OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1; Muscleblind-like protein 1 OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1; Isoform 2 of Muscleblind-like protein 2 OS=Mus musculus OX=10090 GN=Mbnl2; Isoform 4 of Muscleblind-like protein 2 OS=Mus musculus OX=10090 GN=Mbnl2 0 2 2 0.3727 0 1 1 1 658.40857 1315.80986 1315.80981 0.04 0.00003 0/0 0 0 10766366 HCD 30 MS2 12.47674 906.1 110 68.9905 20723 20723 20718 QEplus033719.raw F4 957.4 843.7 967.2 612.5 1180.9 874.6 436 3.22 1 FALSE 0.0001603 0.003782 0.533 -250 100376 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HELAQLK [R].hELAQLk.[A] N-Term(TMT6plex); K7(TMT6plex) 5 Q9JKY5 Huntingtin-interacting protein 1-related protein OS=Mus musculus OX=10090 GN=Hip1r PE=1 SV=2 Q9JKY5; Q6ZQ77; Q80UP1; Q6P1F5; Q9D689 Huntingtin-interacting protein 1-related protein OS=Mus musculus OX=10090 GN=Hip1r PE=1 SV=2; MKIAA0655 protein (Fragment) OS=Mus musculus OX=10090 GN=Hip1r PE=2 SV=1; Hip1r protein (Fragment) OS=Mus musculus OX=10090 GN=Hip1r PE=2 SV=1; Huntingtin interacting protein 1 related OS=Mus musculus OX=10090 GN=Hip1r PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hip1r PE=2 SV=1 0 3 3 0.5081 0 1 1 1 432.9425 1296.81296 1296.80399 6.92 0.00299 0/0 0 0 8891617 HCD 30 MS2 40.88089 833.5 86.525 68.9953 20725 20725 20718 QEplus033719.raw F4 911.5 649 821.6 529 1113 977.1 136 2.46 1 FALSE 0.001658 0.02723 0.231 -250 100393 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TILNNGK [K].tILNNGk.[T] N-Term(TMT6plex); K7(TMT6plex) 1 P16015 Carbonic anhydrase 3 OS=Mus musculus OX=10090 GN=Ca3 PE=1 SV=3 P16015 Carbonic anhydrase 3 OS=Mus musculus OX=10090 GN=Ca3 PE=1 SV=3 0 3 3 0.3805 0 1 1 1 406.59262 1217.76331 1217.76179 1.25 0.00051 0/0 0 0 6905115.5 HCD 30 MS2 61.19325 594.5 110 69 20727 20727 20718 QEplus033719.raw F4 621.1 468 528.1 469 963 518.1 334 2.26 1 FALSE 0.00439 0.07941 0.063 -250 100417 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELGTVMR [K].eLGTVMR.[MS] N-Term(TMT6plex) 4 P20801; P0DP27 "Troponin C, skeletal muscle OS=Mus musculus OX=10090 GN=Tnnc2 PE=1 SV=2;Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1" P20801; Q3UZY7; P0DP27; Q3UKW2 "Troponin C, skeletal muscle OS=Mus musculus OX=10090 GN=Tnnc2 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tnnc2 PE=2 SV=1; Calmodulin-2 OS=Mus musculus OX=10090 GN=Calm2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=1 SV=1" 0 2 2 0.3122 0 1 1 1 517.79742 1034.58757 1034.58658 0.96 0.0005 0/0 0 0 36785904 HCD 30 MS2 34.56794 849.4 23.662 69.0118 20731 20731 20729 QEplus033719.raw F4 857.4 635.7 875 827.2 976.5 924.6 238 2.37 2 FALSE 0.0003408 0.006539 0.467 -250 100424 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALEELQR [K].aLEELQR.[Q] N-Term(TMT6plex) 1 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 0 2 2 0.278 0 1 1 1 544.32025 1087.63323 1087.63089 2.15 0.00117 0/0 0 0 23009486 HCD 30 MS2 53.85442 1253.9 50.532 69.0141 20732 20732 20729 QEplus033719.raw F4 1285 1004.7 1260.4 1031.1 1632 1310.4 320 2.05 1 FALSE 0.002869 0.05601 0.125 -250 100429 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYELQASR [K].vYELQASR.[V] N-Term(TMT6plex) 1 Q8QZY1 Eukaryotic translation initiation factor 3 subunit L OS=Mus musculus OX=10090 GN=Eif3l PE=1 SV=1 Q8QZY1 Eukaryotic translation initiation factor 3 subunit L OS=Mus musculus OX=10090 GN=Eif3l PE=1 SV=1 0 2 2 0.5365 0 1 1 1 597.83868 1194.67009 1194.668 1.75 0.00104 0/0 0 0 22332760 HCD 30 MS2 33.37767 1293.6 110 69.0166 20733 20733 20729 QEplus033719.raw F4 1309.3 1019.4 1441.5 1134.6 1381.1 1475.7 340 2.74 1 FALSE 1.14E-05 0.000817 0.68 -250 100438 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQHQLGEFK [R].aQHQLGEFk.[T] N-Term(TMT6plex); K9(TMT6plex) 4 Q8BJ71 Nuclear pore complex protein Nup93 OS=Mus musculus OX=10090 GN=Nup93 PE=1 SV=1 Q8BJ71; Q3TFC8; Q8BJ71-2; A0A1D5RLQ0 Nuclear pore complex protein Nup93 OS=Mus musculus OX=10090 GN=Nup93 PE=1 SV=1; Nuclear pore complex protein Nup93 (Fragment) OS=Mus musculus OX=10090 GN=Nup93 PE=2 SV=1; Isoform 2 of Nuclear pore complex protein Nup93 OS=Mus musculus OX=10090 GN=Nup93; Nuclear pore complex protein Nup93 OS=Mus musculus OX=10090 GN=Nup93 PE=1 SV=1 0 3 3 0.6564 0 1 1 1 505.96191 1515.87119 1515.86838 1.85 0.00094 0/0 0 0 15097089 HCD 30 MS2 40.5888 1249 104.872 69.019 20734 20734 20729 QEplus033719.raw F4 1542 968.1 1296.9 1151.1 1267.6 1268.1 368 2.91 1 FALSE 1.14E-05 0.0008783 0.674 -250 100459 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTGDCSDEEVDGKADGADAK [K].gTGDcSDEEVDGkADGADAk.[A] N-Term(TMT6plex); C5(Carbamidomethyl); K13(TMT6plex); K20(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q7TQJ6; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 3 3 0.7804 0 1 1 1 895.43713 2684.29685 2684.29243 1.65 0.00147 0/0 0 0 5072390.5 HCD 30 MS2 0 398.7 110 69.0288 20738 20738 20729 QEplus033719.raw F4 384.2 431.2 454.9 283.4 498 340.2 160 4.19 1 FALSE 1.14E-05 4.19E-15 2.828 -250 100466 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELGNDAYK [K].eLGNDAYk.[K] N-Term(TMT6plex); K8(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 2 2 0.4437 0 1 1 1 684.38135 1367.75542 1367.7571 -1.23 -0.00084 0/0 0 0 6712660 HCD 30 MS2 13.98235 648.9 110 69.0313 20739 20739 20729 QEplus033719.raw F4 754 558.8 708 527.9 716.5 628 310 2.93 1 FALSE 1.14E-05 0.0001766 0.81 -250 100491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCEVVVSGK [K].gcEVVVSGk.[L] N-Term(TMT6plex); C2(Carbamidomethyl); K9(TMT6plex) 6 Q5YLW3 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1 Q9D0A2; D3YV43; Q9CZP6; Q3UCL7; O89068; Q5YLW3 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; Ribosomal protein S3 (Fragment) OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1 0 2 2 0.5914 0 1 1 1 696.89978 1392.79228 1392.79211 0.13 0.00009 0/0 0 0 143992800 HCD 30 MS2 5.201738 792.5 15.64 69.0434 20743 20743 20740 QEplus033719.raw F4 810.1 749.6 929.3 643.3 825.6 797 482 3.72 1 FALSE 1.14E-05 6.44E-06 1.084 -250 100494 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYIGVVNR [R].gYIGVVNR.[S] N-Term(TMT6plex) 16 Q3TCR7; P39053; P39054 Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1;Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=2;Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2 Q3TCR7; P39053; P39053-3; P39054; A0A0J9YUN4; P39053-4; P39054-2; G3X9G4; F8WIV5; Q3T9X3; Q9CUM4; Q3TBU6; A0A0J9YUE9; P39053-5; G3UZZ3; P39053-6 Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=2; Isoform 3 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1; Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=1; Isoform 4 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1; Isoform 2 of Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin GTPase (Fragment) OS=Mus musculus OX=10090 GN=Dnm2 PE=2 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=2 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=1; Isoform 5 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1; Dynamin GTPase (Fragment) OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Isoform 6 of Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1 0 2 2 0.5291 0 1 1 1 553.82739 1106.64751 1106.65196 -4.02 -0.00223 0/0 0 0 15368487 HCD 30 MS2 40.12955 1049.1 40.27 69.0456 20744 20744 20740 QEplus033719.raw F4 1101 798.2 1095.1 984.4 1165 1150.9 290 2.06 3 FALSE 0.0003496 0.006794 0.462 -250 100508 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RITADQALK [K].rITADQALk.[H] N-Term(TMT6plex); K9(TMT6plex) 8 Q923T9 Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Mus musculus OX=10090 GN=Camk2g PE=1 SV=1 A0A286YCW8; A0A286YCB8; Q923T9; Q923T9-2; Q6ZWS7; A0A286YDL6; A0A2I3BQP6; A0A286YDK9 Calcium/calmodulin-dependent protein kinase type II subunit gamma (Fragment) OS=Mus musculus OX=10090 GN=Camk2g PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit gamma (Fragment) OS=Mus musculus OX=10090 GN=Camk2g PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Mus musculus OX=10090 GN=Camk2g PE=1 SV=1; Isoform 2 of Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Mus musculus OX=10090 GN=Camk2g; Calcium/calmodulin-dependent protein kinase OS=Mus musculus OX=10090 GN=Camk2g PE=2 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit gamma (Fragment) OS=Mus musculus OX=10090 GN=Camk2g PE=1 SV=1; Calcium/calmodulin-dependent protein kinase OS=Mus musculus OX=10090 GN=Camk2g PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit gamma (Fragment) OS=Mus musculus OX=10090 GN=Camk2g PE=1 SV=1 1 3 3 0.3312 0 1 1 1 491.97672 1473.91559 1473.91533 0.18 0.00009 0/0 0 0 27914304 HCD 30 MS2 18.86384 1101.7 71.631 69.0526 20747 20747 20740 QEplus033719.raw F4 1201.4 839.4 1148.5 997.1 1193.2 1230.4 378 4.62 1 FALSE 1.14E-05 9.64E-08 1.43 -250 100518 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YVTVQNTVR [K].yVTVQNTVR.[F] N-Term(TMT6plex) 2 Q9R0X4 "Acyl-coenzyme A thioesterase 9, mitochondrial OS=Mus musculus OX=10090 GN=Acot9 PE=1 SV=1" Q32MW3; Q9R0X4 "Acyl-coenzyme A thioesterase 10, mitochondrial OS=Mus musculus OX=10090 GN=Acot10 PE=2 SV=1; Acyl-coenzyme A thioesterase 9, mitochondrial OS=Mus musculus OX=10090 GN=Acot9 PE=1 SV=1" 0 2 2 0.5212 0 1 1 1 654.87756 1308.74785 1308.74732 0.41 0.00027 0/0 0 0 14407532 HCD 30 MS2 56.56401 1106.5 110 69.0552 20748 20748 20740 QEplus033719.raw F4 1349 710.9 1105 1214.6 1018.7 1241 410 3.07 1 FALSE 1.14E-05 1.43E-05 1.018 -250 100544 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTGDCSDEEVDGKADGADAK [K].gTGDcSDEEVDGkADGADAk.[A] N-Term(TMT6plex); C5(Carbamidomethyl); K13(TMT6plex); K20(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q7TQJ6; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 4 4 0.8641 0 1 1 1 671.8299 2684.29775 2684.29243 1.98 0.00133 0/0 0 0 3608495.75 HCD 30 MS2 0 330.4 110 69.07 20753 20753 20751 QEplus033719.raw F4 320.1 326.2 367.3 227.1 445.9 295.9 161 5.96 1 FALSE 1.14E-05 7.25E-16 2.974 -250 100565 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SILYDER [K].sILYDER.[S] N-Term(TMT6plex) 4 P49722 Proteasome subunit alpha type-2 OS=Mus musculus OX=10090 GN=Psma2 PE=1 SV=3 P49722; Q8BKE0; Q3UWT6; Q9CZ58 Proteasome subunit alpha type-2 OS=Mus musculus OX=10090 GN=Psma2 PE=1 SV=3; Proteasome subunit alpha type-2 (Fragment) OS=Mus musculus OX=10090 GN=Psma2 PE=1 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma2 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma2 PE=2 SV=1 0 2 2 0.5461 0 1 1 1 562.81219 1124.61711 1124.6149 1.96 0.0011 0/0 0 0 30796088 HCD 30 MS2 41.43663 980.1 30.5 69.0768 20756 20756 20751 QEplus033719.raw F4 969.9 781.3 1025.3 861.9 1215.9 1026.3 161 2.93 1 FALSE 0.0002419 0.004832 0.505 -250 100574 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLDAGK [K].vLDAGk.[V] N-Term(TMT6plex); K6(TMT6plex) 2 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 B9EIU1; Q8CGC7 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4 0 2 2 0.2161 0 1 1 1 530.84229 1060.67729 1060.67667 0.59 0.00031 0/0 0 0 21509284 HCD 30 MS2 34.31657 1727 99.039 69.0791 20757 20757 20751 QEplus033719.raw F4 2210.1 1257.2 1753.5 1638.2 1903.8 1599.1 152 1.99 1 FALSE 0.003658 0.06983 0.088 -250 100596 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STLDQVK [R].sTLDQVk.[K] N-Term(TMT6plex); K7(TMT6plex) 1 Q9CPW7 Zinc finger matrin-type protein 2 OS=Mus musculus OX=10090 GN=Zmat2 PE=2 SV=1 Q9CPW7 Zinc finger matrin-type protein 2 OS=Mus musculus OX=10090 GN=Zmat2 PE=2 SV=1 0 2 2 0.1667 0 1 1 1 624.88214 1248.75701 1248.75637 0.51 0.00032 0/0 0 0 7510928 HCD 30 MS2 0 826.5 110 69.0861 20760 20760 20751 QEplus033719.raw F4 833.9 666.6 880.4 689.9 945.8 942.4 436 2.52 1 FALSE 0.0006216 0.009161 0.418 -250 100606 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CIELDER [K].cIELDER.[L] N-Term(TMT6plex); C1(Carbamidomethyl) 2 Q3UQL2 COP9 signalosome complex subunit 3 OS=Mus musculus OX=10090 GN=Cops3 PE=1 SV=1 Q3UQL2; Q3TEA5 COP9 signalosome complex subunit 3 OS=Mus musculus OX=10090 GN=Cops3 PE=1 SV=1; COP9 signalosome complex subunit 3 (Fragment) OS=Mus musculus OX=10090 GN=Cops3 PE=2 SV=1 0 2 2 0.4007 0 1 1 1 582.2995 1163.59172 1163.59279 -0.92 -0.00053 0/0 0 0 7498362 HCD 30 MS2 54.22617 1104 110 69.0887 20761 20761 20751 QEplus033719.raw F4 1212.5 834.8 1161.4 1059.2 1119.2 1236.8 150 2.77 1 FALSE 0.0002218 0.004631 0.51 -250 100651 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQLAALR [K].eQLAALR.[K] N-Term(TMT6plex) 2 E9PV44 ATP synthase F1 subunit epsilon OS=Mus musculus OX=10090 GN=Atpif1 PE=1 SV=1 E9PV44; O35143 "ATP synthase F1 subunit epsilon OS=Mus musculus OX=10090 GN=Atpif1 PE=1 SV=1; ATPase inhibitor, mitochondrial OS=Mus musculus OX=10090 GN=Atp5if1 PE=1 SV=2" 0 2 2 0.1006 0 1 1 1 515.31714 1029.627 1029.62541 1.54 0.0008 0/0 0 0 12272857 HCD 30 MS2 67.05958 1178.1 80.637 69.1075 20768 20768 20762 QEplus033719.raw F4 1663.9 717.9 1045.8 1194.6 1310.2 1136.3 335 1.69 1 FALSE 0.003159 0.06183 0.109 -250 100659 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVEAIK [R].nVEAIk.[G] N-Term(TMT6plex); K6(TMT6plex) 4 Q5SX40 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1 Q9ESW6; Q5SX40; B2RWX0; Q3TT35 "Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1" 0 2 2 0.191 0 1 1 1 566.36157 1131.71587 1131.71378 1.84 0.00104 0/0 0 0 7311589 HCD 30 MS2 60.59102 1075.3 110 69.11 20769 20769 20762 QEplus033719.raw F4 1163.2 467.5 797.3 2031.4 727.7 1264.8 424 1.99 1 FALSE 0.00198 0.03471 0.195 -250 100669 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVHLDVR [K].vVHLDVR.[G] N-Term(TMT6plex) 3 B1AU25 "Apoptosis-inducing factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Aifm1 PE=1 SV=1" B1AU25; Q9Z0X1-2; Q9Z0X1 "Apoptosis-inducing factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Aifm1 PE=1 SV=1; Isoform 2 of Apoptosis-inducing factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Aifm1; Apoptosis-inducing factor 1, mitochondrial OS=Mus musculus OX=10090 GN=Aifm1 PE=1 SV=1" 0 3 3 0.6 0 1 1 1 356.22321 1066.65506 1066.65704 -1.86 -0.00066 0/0 0 0 5269844 HCD 30 MS2 49.75917 277.9 110 69.1125 20770 20770 20762 QEplus033719.raw F4 296.4 211.2 289.9 248.6 292.2 329.4 66 2.65 1 FALSE 0.0008718 0.012 0.373 -250 100694 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEEASGGPLAPK [K].qEEASGGPLAPk.[A] N-Term(TMT6plex); K12(TMT6plex) 1 P70460 Vasodilator-stimulated phosphoprotein OS=Mus musculus OX=10090 GN=Vasp PE=1 SV=4 P70460 Vasodilator-stimulated phosphoprotein OS=Mus musculus OX=10090 GN=Vasp PE=1 SV=4 0 2 2 0.5622 0 1 1 1 821.46417 1641.92107 1641.92121 -0.08 -0.00007 0/0 0 0 2391886.75 HCD 30 MS2 0 265.1 110 69.1274 20775 20775 20773 QEplus033719.raw F4 277.3 204.3 314.6 186.4 268 340.1 369 3.86 1 FALSE 1.14E-05 3.54E-09 1.703 -250 100704 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGVNGFGR [K].vGVNGFGR.[I] N-Term(TMT6plex) 7 A0A0A0MQF6 Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 Q2VWQ4; A0A1D5RLD8; A0A0A0MQF6; S4R1N5; P16858; S4R1W1; Q4VBD1 GAPDH (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=2 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm10358 PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=2; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm3839 PE=1 SV=1; Gapdh protein OS=Mus musculus OX=10090 GN=Gapdh PE=2 SV=1 0 2 2 0.4931 0 1 1 1 517.8006 1034.59392 1034.59444 -0.51 -0.00026 0/0 0 0 72830672 HCD 30 MS2 17.10915 892.8 19.348 69.1296 20776 20776 20773 QEplus033719.raw F4 1044 614.2 882.3 938 872.9 1005.5 198 2.9 1 FALSE 1.14E-05 0.000323 0.759 -250 100722 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DASNWSTEK [R].dASNWSTEk.[L] N-Term(TMT6plex); K9(TMT6plex) 2 Q8BK64 Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Mus musculus OX=10090 GN=Ahsa1 PE=1 SV=2 Q8BK64; Q3TL79 Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Mus musculus OX=10090 GN=Ahsa1 PE=1 SV=2; Aha1_N domain-containing protein OS=Mus musculus OX=10090 GN=Ahsa1 PE=2 SV=1 0 2 2 0.6366 0 1 1 1 748.39221 1495.77715 1495.77929 -1.43 -0.00107 0/0 0 0 10751073 HCD 30 MS2 56.96914 1035.2 98.297 69.1345 20778 20778 20773 QEplus033719.raw F4 1041.3 858.5 1118.8 919.8 1116.2 1156.3 247 3.22 1 FALSE 1.14E-05 6.11E-05 0.898 -250 100757 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFEEESKQPGVSEQQR [R].eFEEESkQPGVSEQQR.[H] N-Term(TMT6plex); K7(TMT6plex) 3 Q9R190 Metastasis-associated protein MTA2 OS=Mus musculus OX=10090 GN=Mta2 PE=1 SV=1 Q3TZP3; Q9R190; Q3UDZ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Mta2 PE=2 SV=1; Metastasis-associated protein MTA2 OS=Mus musculus OX=10090 GN=Mta2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Mta2 PE=2 SV=1 1 3 3 0.6725 0 1 1 1 789.07355 2365.20609 2365.20359 1.06 0.00083 0/0 0 0 2878011 HCD 30 MS2 0 206.5 110 69.1445 20782 20782 20773 QEplus033719.raw F4 181.1 210.5 262.1 174.7 195.1 215.5 311 3.45 1 FALSE 1.14E-05 1.64E-12 2.336 -250 100762 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSEIMQQK [R].dSEIMQQk.[Q] N-Term(TMT6plex); K8(TMT6plex) 4 P84102 Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=1 SV=1 O88892; P84102; B2KF73; Q58DZ4 Small EDRK-rich factor 1 OS=Mus musculus OX=10090 GN=Serf1 PE=1 SV=1; Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=1 SV=1; Small EDRK-rich factor 1 OS=Mus musculus OX=10090 GN=Serf1 PE=4 SV=1; Small EDRK-rich factor 2 OS=Mus musculus OX=10090 GN=Serf2 PE=2 SV=1 0 2 2 0.4123 0 1 1 1 718.89612 1436.78496 1436.78194 2.1 0.00151 0/0 0 0 3171680.75 HCD 30 MS2 0 348.6 110 69.147 20783 20783 20773 QEplus033719.raw F4 340.4 322.4 403.7 254.3 415.1 355.6 335 3.42 1 FALSE 1.14E-05 5.94E-05 0.9 -250 100790 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVVFGK [K].hVVFGk.[VI] N-Term(TMT6plex); K6(TMT6plex) 12 P24369; Q3UAJ1; Q3UWH9; P30412 Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus OX=10090 GN=Ppib PE=1 SV=2;Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1;Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1;Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus OX=10090 GN=Ppic PE=1 SV=1 P24369; Q3TE63; Q3UAJ1; Q3UWH9; P30412; Q5SVY2; Q9CZK9; Q9D868; A0A1L1SST0; Q4G0C5; A2BGI8; Q3UY37 Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus OX=10090 GN=Ppib PE=1 SV=2; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus OX=10090 GN=Ppic PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase (Fragment) OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1 0 3 3 0.5829 0 1 1 1 382.24622 1144.72409 1144.72429 -0.17 -0.00006 0/0 0 0 17590612 HCD 30 MS2 58.69755 577.8 38.926 69.1613 20788 20788 20784 QEplus033719.raw F4 722.7 379.8 504 513.2 875.3 472 223 1.87 4 FALSE 0.004181 0.07658 0.07 -250 100800 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHTILMSDK [R].qHTILMSDk.[S] N-Term(TMT6plex); K9(TMT6plex) 16 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 F6XCT0; Q9QXZ0-3; B1ARU4; F6SHS0; E9QA63; E9QNP1; Q3UPG9; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; A0A5F8MP99; Q9QXZ0; A0A0A0MQA6; A0A571BF93; E9PVY8 Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 3 3 0.5354 0 1 1 1 510.96289 1530.87412 1530.87142 1.76 0.0009 0/0 0 0 16741877 HCD 30 MS2 29.97978 949 89.423 69.1636 20789 20789 20784 QEplus033719.raw F4 974.7 744.2 1040.2 764.1 1034.7 1136.2 403 2.97 3 FALSE 1.14E-05 0.0001602 0.818 -250 100810 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DASNWSTEK [R].dASNWSTEk.[L] N-Term(TMT6plex); K9(TMT6plex) 2 Q8BK64 Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Mus musculus OX=10090 GN=Ahsa1 PE=1 SV=2 Q8BK64; Q3TL79 Activator of 90 kDa heat shock protein ATPase homolog 1 OS=Mus musculus OX=10090 GN=Ahsa1 PE=1 SV=2; Aha1_N domain-containing protein OS=Mus musculus OX=10090 GN=Ahsa1 PE=2 SV=1 0 2 2 0.6487 0 1 1 1 748.39209 1495.7769 1495.77929 -1.6 -0.0012 0/0 0 0 9073909 HCD 30 MS2 39.63169 1113 103.899 69.166 20790 20790 20784 QEplus033719.raw F4 1138.4 911.7 1135.1 1001 1230.6 1261.3 250 3.9 1 FALSE 1.14E-05 1.20E-05 1.032 -250 100839 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSSPATLNSR [K].lSSPATLNSR.[V] N-Term(TMT6plex) 1 P00761 SWISS-PROT:P00761 Trypsin - Sus scrofa (Pig). P00761 SWISS-PROT:P00761 Trypsin - Sus scrofa (Pig). 0 2 2 0.3963 0 1 1 1 637.86719 1274.7271 1274.72658 0.41 0.00026 0/0 0 0 82819208 HCD 30 MS2 3.104282 671 25.32 69.183 20796 20796 20795 QEplus033719.raw F4 604.4 668.5 749.4 574.7 661.3 767.5 396 3.23 1 TRUE 1.14E-05 0.0003026 0.765 -250 100853 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IIQSAK [RK].iIQSAk.[VT] N-Term(TMT6plex); K6(TMT6plex) 4 Q9CPQ8 "ATP synthase subunit g, mitochondrial OS=Mus musculus OX=10090 GN=Atp5mg PE=1 SV=1" Q9CPQ8; J3QNM7; Q9D037; Q9CQY3 "ATP synthase subunit g, mitochondrial OS=Mus musculus OX=10090 GN=Atp5mg PE=1 SV=1; ATP synthase subunit OS=Mus musculus OX=10090 GN=Gm5426 PE=3 SV=1; ATP synthase subunit OS=Mus musculus OX=10090 GN=Atp5l PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Atp5l PE=2 SV=1" 0 2 2 0.1826 0 1 1 1 559.37152 1117.73577 1117.73452 1.12 0.00062 0/0 0 0 31381116 HCD 30 MS2 46.23806 673.2 25.708 69.1878 20798 20798 20795 QEplus033719.raw F4 626.5 395.5 756.2 819.3 536.2 905.3 179 2.19 2 FALSE 0.004228 0.07794 0.067 -250 100854 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLQSAK [RK].lLQSAk.[VT] N-Term(TMT6plex); K6(TMT6plex) 8 Q8CEC8 Eukaryotic elongation factor 2 kinase OS=Mus musculus OX=10090 GN=Eef2k PE=2 SV=1 F6Z4J2; Q8CEC8; Q69ZT0; O08796; Q7TPC7; P98197; Q8BNP6; E9Q3G7 Phospholipid-transporting ATPase (Fragment) OS=Mus musculus OX=10090 GN=Atp11a PE=1 SV=1; Eukaryotic elongation factor 2 kinase OS=Mus musculus OX=10090 GN=Eef2k PE=2 SV=1; Phospholipid-transporting ATPase (Fragment) OS=Mus musculus OX=10090 GN=mKIAA1021 PE=3 SV=2; Eukaryotic elongation factor 2 kinase OS=Mus musculus OX=10090 GN=Eef2k PE=1 SV=1; Eukaryotic elongation factor 2 kinase OS=Mus musculus OX=10090 GN=Eef2k PE=2 SV=1; Phospholipid-transporting ATPase IH OS=Mus musculus OX=10090 GN=Atp11a PE=1 SV=1; Eukaryotic elongation factor 2 kinase OS=Mus musculus OX=10090 GN=Eef2k PE=2 SV=1; Phospholipid-transporting ATPase OS=Mus musculus OX=10090 GN=Atp11a PE=1 SV=1 0 2 2 0.1826 0 1 2 2 559.37152 1117.73577 1117.73452 1.12 0.00062 0/0 0 0 31381116 HCD 30 MS2 46.23806 673.2 25.708 69.1878 20798 20798 20795 QEplus033719.raw F4 626.5 395.5 756.2 819.3 536.2 905.3 179 2.19 2 FALSE 0.004228 0.07794 0.067 -250 100863 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTFAAMGR [R].dTFAAMGR.[L] N-Term(TMT6plex) 4 Q545G1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Mylpf PE=1 SV=1 Q545G1; F6ULR7; A0A0U1RP93; A0A0U1RQ36 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Mylpf PE=1 SV=1; Myosin regulatory light chain 2, skeletal muscle isoform (Fragment) OS=Mus musculus OX=10090 GN=Mylpf PE=1 SV=8; Myosin regulatory light chain 2, skeletal muscle isoform OS=Mus musculus OX=10090 GN=Mylpf PE=1 SV=1; Myosin regulatory light chain 2, skeletal muscle isoform (Fragment) OS=Mus musculus OX=10090 GN=Mylpf PE=1 SV=1" 0 2 2 0.6621 0 1 1 1 549.28485 1097.56243 1097.5611 1.21 0.00067 0/0 0 0 25781416 HCD 30 MS2 23.2089 1450 74.594 69.1901 20799 20799 20795 QEplus033719.raw F4 1696 540.3 1200.3 2340.3 698.5 2224.8 109 2.93 1 FALSE 1.14E-05 0.0001738 0.811 -250 100870 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTVQGFK [K].nTVQGFk.[R] N-Term(TMT6plex); K7(TMT6plex) 5 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q8C6R3; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 0 2 2 0.3243 0 1 1 1 626.37555 1251.74382 1251.74614 -1.85 -0.00116 0/0 0 0 10784359 HCD 30 MS2 24.77934 1013.7 110 69.1926 20800 20800 20795 QEplus033719.raw F4 1049.9 839 1145.6 811.3 1147.6 1088.9 377 2.22 1 FALSE 0.0007816 0.01084 0.391 -250 100897 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPFGEHWR [K].kPFGEHWR.[K] N-Term(TMT6plex); K1(TMT6plex) 1 Q8K2B3 "Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Mus musculus OX=10090 GN=Sdha PE=1 SV=1" Q8K2B3 "Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Mus musculus OX=10090 GN=Sdha PE=1 SV=1" 0 4 4 0.5878 0 1 1 1 379.47144 1514.86391 1514.86324 0.44 0.00017 0/0 0 0 8906930 HCD 30 MS2 27.64635 555.2 110 69.2 20803 20803 20795 QEplus033719.raw F4 605.7 422.4 740.5 398 338.1 826.3 383 3.93 1 FALSE 0.0001603 0.003514 0.541 -250 100912 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TMNISPEQPQH [R].tMNISPEQPQH.[-] N-Term(TMT6plex) 5 Q4G0C0 Sec23 interacting protein OS=Mus musculus OX=10090 GN=Sec23ip PE=2 SV=1 Q3UY74; Q4G0C0; Q6NZC7; A0AUN0; G3X928 DDHD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sec23ip PE=2 SV=1; Sec23 interacting protein OS=Mus musculus OX=10090 GN=Sec23ip PE=2 SV=1; SEC23-interacting protein OS=Mus musculus OX=10090 GN=Sec23ip PE=1 SV=2; Sec23ip protein (Fragment) OS=Mus musculus OX=10090 GN=Sec23ip PE=2 SV=1; SEC23-interacting protein OS=Mus musculus OX=10090 GN=Sec23ip PE=1 SV=1 0 2 2 0.8594 0 1 1 1 755.87952 1510.75176 1510.75214 -0.26 -0.00019 0/0 0 0 4263729 HCD 30 MS2 0 135.1 110 69.2049 20805 20805 20795 QEplus033719.raw F4 129.6 116.8 141.4 118.5 154.7 149.5 147 3.77 1 FALSE 1.14E-05 9.65E-08 1.43 -250 100920 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGPVKPQSPEEEK [R].dGPVkPQSPEEEk.[A] N-Term(TMT6plex); K5(TMT6plex); K13(TMT6plex) 2 A0A068BIT0 Solute carrier family 39 OS=Mus musculus OX=10090 GN=Slc39a7 PE=1 SV=1 A0A068BIT0; Q14C53 "Solute carrier family 39 OS=Mus musculus OX=10090 GN=Slc39a7 PE=1 SV=1; Solute carrier family 39 (Zinc transporter), member 7 OS=Mus musculus OX=10090 GN=Slc39a7 PE=2 SV=1" 0 3 3 0.7393 0 1 1 1 709.7345 2127.18894 2127.19006 -0.53 -0.00037 0/0 0 0 8159765 HCD 30 MS2 0 503.5 110 69.2122 20807 20807 20806 QEplus033719.raw F4 467.7 405 585.8 455.5 514.6 592.4 449 3.49 1 FALSE 1.14E-05 3.74E-09 1.698 -250 100976 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HYQINQQWER [K].hYQINQQWER.[T] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; B9EHT6; A0A087WR50; Q3UGY5; Q4KL80; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.7564 0 1 1 1 815.91901 1630.83074 1630.82875 1.22 0.00099 0/0 0 0 2951302.5 HCD 30 MS2 0 291.2 110 69.229 20814 20814 20806 QEplus033719.raw F4 257.8 249 352.6 359 192.5 336.4 192 3.53 3 FALSE 1.14E-05 1.08E-06 1.231 -250 100990 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLNPQK [K].vLNPQk.[Q] N-Term(TMT6plex); K6(TMT6plex) 5 P22892 AP-1 complex subunit gamma-1 OS=Mus musculus OX=10090 GN=Ap1g1 PE=1 SV=3 Q8CC03; Q8CBB7; Q8BSZ7; Q3UKX8; P22892 GAE domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ap1g1 PE=2 SV=1; AP-1 complex subunit gamma OS=Mus musculus OX=10090 GN=Ap1g1 PE=1 SV=1; GAE domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ap1g1 PE=2 SV=1; AP-1 complex subunit gamma OS=Mus musculus OX=10090 GN=Ap1g1 PE=2 SV=1; AP-1 complex subunit gamma-1 OS=Mus musculus OX=10090 GN=Ap1g1 PE=1 SV=3 0 2 2 0.455 0 1 1 1 578.87579 1156.74431 1156.74541 -0.95 -0.00055 0/0 0 0 11192515 HCD 30 MS2 21.74251 978.6 110 69.2338 20816 20816 20806 QEplus033719.raw F4 1037.2 819.9 991.2 797.6 1214.9 1010.9 133 2.22 1 FALSE 0.005197 0.08882 0.037 -250 101032 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIQLHK [R].gIQLHk.[M] N-Term(TMT6plex); K6(TMT6plex) 4 Q9D6Y9 "1,4-alpha-glucan-branching enzyme OS=Mus musculus OX=10090 GN=Gbe1 PE=1 SV=1" Q9D6Y9; F6ZHD8; G3UW30; Q8C7E6 "1,4-alpha-glucan-branching enzyme OS=Mus musculus OX=10090 GN=Gbe1 PE=1 SV=1; 1,4-alpha-glucan branching enzyme OS=Mus musculus OX=10090 GN=Gbe1 PE=1 SV=2; 1,4-alpha-glucan branching enzyme OS=Mus musculus OX=10090 GN=Gbe1 PE=1 SV=1; 1,4-alpha-glucan branching enzyme OS=Mus musculus OX=10090 PE=2 SV=1" 0 3 3 0.1765 0 1 1 1 385.25363 1153.74634 1153.74575 0.51 0.0002 0/0 0 0 5197948.5 HCD 30 MS2 33.49478 338.7 110 69.2511 20822 20822 20817 QEplus033719.raw F4 322.1 245.8 381.6 337.1 320.3 425.3 70 2.55 1 FALSE 0.001607 0.0251 0.244 -250 101050 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNVDDPTGNFR [K].dNVDDPTGNFR.[N] N-Term(TMT6plex) 1 Q9DBH5 Vesicular integral-membrane protein VIP36 OS=Mus musculus OX=10090 GN=Lman2 PE=1 SV=2 Q9DBH5 Vesicular integral-membrane protein VIP36 OS=Mus musculus OX=10090 GN=Lman2 PE=1 SV=2 0 2 2 0.7282 0 1 1 1 739.8573 1478.70732 1478.7073 0.01 0.00001 0/0 0 0 2548879.5 HCD 30 MS2 0 257.3 110 69.2561 20824 20824 20817 QEplus033719.raw F4 248.2 206.3 266.2 262.6 225.1 335.6 74 4.71 1 FALSE 1.14E-05 3.38E-09 1.707 -250 101073 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HAACPVLVGNK [R].hAAcPVLVGNk.[W] N-Term(TMT6plex); C4(Carbamidomethyl); K11(TMT6plex) 6 Q60715-2; Q3UF16 Isoform 2 of Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1;Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1 E9Q7B0; Q60715-2; Q3TN84; Q3UF16; Q3TTT2; Q60715 Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=1 SV=1; Isoform 2 of Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1; Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1 PE=1 SV=2 0 2 2 0.7642 0 1 1 1 812.47522 1623.94316 1623.9405 1.64 0.00133 0/0 0 0 5323770 HCD 30 MS2 0 274.8 110 69.2636 20827 20827 20817 QEplus033719.raw F4 273.5 211.3 298.9 259.6 292.3 313.2 377 4.41 2 FALSE 1.14E-05 3.86E-10 1.886 -250 101083 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYEEIVK [K].rYEEIVk.[E] N-Term(TMT6plex); K7(TMT6plex) 6 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 1 3 3 0.1863 0 1 1 1 465.61856 1394.84113 1394.84077 0.26 0.00012 0/0 0 0 102379368 HCD 30 MS2 29.64129 609.2 10.52 69.2709 20829 20829 20828 QEplus033719.raw F4 585.3 439.9 696.7 568.8 675.6 688.9 335 3.06 1 FALSE 1.14E-05 0.0004977 0.723 -250 101093 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HYQINQQWER [K].hYQINQQWER.[T] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; B9EHT6; A0A087WR50; Q3UGY5; Q4KL80; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.7584 0 1 1 1 544.28192 1630.83121 1630.82875 1.51 0.00082 0/0 0 0 78956280 HCD 30 MS2 46.90759 530.2 16.41 69.2754 20831 20831 20828 QEplus033719.raw F4 531 437.9 565.8 498 597 551.6 194 3.85 3 FALSE 1.14E-05 2.52E-07 1.351 -250 101098 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGIQTDEK [K].vGIQTDEk.[G] N-Term(TMT6plex); K8(TMT6plex) 8 Q3UB84; Q3TXK9 Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1;Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1 P47791-2; Q91Z57; Q3UB84; Q3UAS7; Q3U9R7; P47791; Q3TXK9; Q3TWI5 "Isoform Cytoplasmic of Glutathione reductase, mitochondrial OS=Mus musculus OX=10090 GN=Gsr; Glutathione-disulfide reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1; Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1; Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1; Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1; Glutathione reductase, mitochondrial OS=Mus musculus OX=10090 GN=Gsr PE=1 SV=3; Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1; Glutathione reductase (Fragment) OS=Mus musculus OX=10090 GN=Gsr PE=2 SV=1" 0 2 2 0.3595 0 1 1 1 674.40173 1347.79619 1347.7884 5.78 0.00389 0/0 0 0 7865195.5 HCD 30 MS2 0 796.6 110 69.2779 20832 20832 20828 QEplus033719.raw F4 789.1 846.6 906.6 571.6 901.7 764.1 500 3.06 2 FALSE 1.14E-05 8.92E-05 0.867 -250 101107 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDAVDSVVR [R].tDAVDSVVR.[D] N-Term(TMT6plex) 4 Q78PY7 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 Q78PY7; Q3UZI3; Q3TW51; Q3TRW3 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1 0 2 2 0.4698 0 1 1 1 595.83246 1190.65764 1190.65783 -0.16 -0.0001 0/0 0 0 20913782 HCD 30 MS2 6.061987 815.7 70.652 69.2827 20834 20834 20828 QEplus033719.raw F4 786.3 648.8 853.5 751 839.5 1015.2 317 3.15 1 FALSE 1.14E-05 4.11E-05 0.931 -250 101118 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSYNTASNK [R].lSYNTASNk.[T] N-Term(TMT6plex); K9(TMT6plex) 3 Q9D1R9 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=2 A0A0G2JGY8; Q9D1R9; A0A0G2JEY6 60S ribosomal protein L34 (Fragment) OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=4; 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=2; 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=1 0 2 2 0.5263 0 1 1 1 728.41425 1455.82121 1455.82076 0.31 0.00023 0/0 0 0 10187527 HCD 30 MS2 0 637.4 110 69.2878 20836 20836 20828 QEplus033719.raw F4 614.2 646.9 744.1 510.3 646.6 662.1 294 4.18 1 FALSE 1.14E-05 0.0001346 0.832 -250 101150 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDQVMQQNPPK [K].eDQVMQQNPPk.[F] N-Term(TMT6plex); K11(TMT6plex) 10 B2RY26 Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1 Q2TAW4; Q1WJL6; B2RQQ1; Q1WNP4; B2RY26; Q5BKR0; Q6P8P3; B2RXX9; Q3UQQ3; A0A2I3BQV3 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Cardiac myosin heavy chain beta (Fragment) OS=Mus musculus OX=10090 GN=Myh7 PE=1 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Cardiac myosin heavy chain alpha (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myh6 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myh6 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin-7 (Fragment) OS=Mus musculus OX=10090 GN=Myh7 PE=1 SV=1" 0 3 3 0.6235 0 1 1 1 591.31921 1771.94309 1771.94129 1.01 0.0006 0/0 0 0 6047388.5 HCD 30 MS2 70.31098 640.2 110 69.3026 20841 20841 20839 QEplus033719.raw F4 683.7 464.8 638.2 685.4 620.5 748.8 330 3.4 1 FALSE 1.14E-05 0.0003489 0.753 -250 101157 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMQSLK [K].aMQSLk.[S] N-Term(TMT6plex); K6(TMT6plex) 6 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" A0A338P731; P63325; Q3UW83; A0A338P7K4; Q3U9P0; A0A3B2W864 "40S ribosomal protein S10 (Fragment) OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; S10_plectin domain-containing protein OS=Mus musculus OX=10090 GN=Rps10 PE=2 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 0 2 2 0.2241 0 1 1 1 568.34979 1135.69231 1135.69094 1.21 0.00069 0/0 0 0 129534104 HCD 30 MS2 4.586818 972.2 11.849 69.3049 20842 20842 20839 QEplus033719.raw F4 939.9 844.2 1046.5 793.7 1136.7 1072.3 222 2.32 2 FALSE 0.007009 0.1109 -0.022 -250 101172 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FGIHPVAGR [R].fGIHPVAGR.[M] N-Term(TMT6plex) 8 Q61941 "NAD(P) transhydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Nnt PE=1 SV=2" Q8BGK0; Q61941; Q3TGH1; Q8C9V5; Q922E1; Q8C1W8; Q3TWH2; Q8C3H2 "Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=1 SV=1; NAD(P) transhydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Nnt PE=1 SV=2; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=2 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=1 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=2 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=2 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=2 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=2 SV=1" 0 3 3 0.5053 0 1 1 1 394.90302 1182.69449 1182.69449 0 0 0/0 0 0 13172389 HCD 30 MS2 45.58333 604.7 73.617 69.3094 20844 20844 20839 QEplus033719.raw F4 531.4 383.3 648.9 409 762.2 893.5 199 2.85 1 FALSE 5.44E-05 0.002422 0.58 -250 101197 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEPPKEEPK [K].vEPPkEEPk.[H] N-Term(TMT6plex); K5(TMT6plex); K9(TMT6plex) 4 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 1 3 3 0.5159 0 1 1 1 580.68823 1740.05014 1740.05105 -0.52 -0.0003 0/0 0 0 11406852 HCD 30 MS2 74.18784 1110.7 110 69.3169 20847 20847 20839 QEplus033719.raw F4 1225.4 912.3 1175.6 927.5 1213.5 1209.9 292 2.52 1 FALSE 0.003953 0.07379 0.078 -250 101215 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AASLGSSQPSRPHVGEAATATK [K].aASLGSSQPSRPHVGEAATATk.[V] N-Term(TMT6plex); K22(TMT6plex) 6 Q8CE80 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1 A0A338P6J9; P51125-6; Q8CE80; P51125; P51125-3; P51125-2 Calpain inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 6 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpastatin OS=Mus musculus OX=10090 GN=Cast PE=1 SV=2; Isoform 3 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Isoform 2 of Calpastatin OS=Mus musculus OX=10090 GN=Cast 0 4 4 0.7278 0 1 1 1 646.10657 2581.40444 2581.40983 -2.09 -0.00135 0/0 0 0 5360995 HCD 30 MS2 32.71474 419 110 69.3219 20849 20849 20839 QEplus033719.raw F4 448.8 381 433.8 378.3 532.7 339.6 494 5.18 1 FALSE 1.14E-05 3.65E-14 2.65 -250 101227 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAHFVFR [K].aAHFVFR.[T] N-Term(TMT6plex) 7 E9QB01; A0A0A6YY47 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2;Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 E9QB01; P13595-3; P13595-2; A0A0A6YY91; A0A0A6YY47; P13595; E9Q589 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2; Isoform 3 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Isoform 2 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 (Fragment) OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=3; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 0 3 3 0.4567 0 1 1 1 359.54495 1076.6203 1076.62027 0.04 0.00001 0/0 0 0 5779751 HCD 30 MS2 6.916977 148.4 110 69.3317 20852 20852 20850 QEplus033719.raw F4 212.2 87.4 155.7 116.4 131.1 187.6 247 2.89 2 FALSE 5.44E-05 0.002117 0.593 -250 101237 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEEMMIR [R].eEEMMIR.[Q] N-Term(TMT6plex) 3 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q810V5; Q8VIJ6; Q7TMH7 "Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1; Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1" 0 2 2 0.4777 0 1 1 1 583.79108 1166.57488 1166.5747 0.15 0.00009 0/0 0 0 12346954 HCD 30 MS2 27.34041 1045 110 69.3342 20853 20853 20850 QEplus033719.raw F4 1067.6 967 1125 792.7 1257.6 1060.3 133 2.47 1 FALSE 0.0004888 0.007759 0.443 -250 101243 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIIDQDK [K].qIIDQDk.[H] N-Term(TMT6plex); K7(TMT6plex) 3 P39447 Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=2 P39447; B9EHJ3; A0A0U1RPW2 Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=2; Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=1; Tight junction protein ZO-1 OS=Mus musculus OX=10090 GN=Tjp1 PE=1 SV=1 0 2 2 0.4441 0 1 1 1 659.39075 1317.77422 1317.77784 -2.75 -0.00181 0/0 0 0 6416981 HCD 30 MS2 36.9638 881.5 110 69.3367 20854 20854 20850 QEplus033719.raw F4 873.4 751.5 961 807.2 850.2 1045.4 405 2.86 1 FALSE 0.0003496 0.006682 0.464 -250 101255 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DETGELSSADEK [K].dETGELSSADEk.[R] N-Term(TMT6plex); K12(TMT6plex) 2 Q9EPU0 Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 PE=1 SV=2 Q9EPU0; Q9EPU0-2 Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 PE=1 SV=2; Isoform 2 of Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 0 2 2 0.563 0 1 1 1 869.94171 1738.87615 1738.87471 0.83 0.00072 0/0 0 0 5472185 HCD 30 MS2 0 354.3 110 69.3417 20856 20856 20850 QEplus033719.raw F4 356.9 268.2 387.1 287.1 414.1 412.2 203 4.6 1 FALSE 1.14E-05 1.17E-11 2.174 -250 101269 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HAACPVLVGNK [R].hAAcPVLVGNk.[W] N-Term(TMT6plex); C4(Carbamidomethyl); K11(TMT6plex) 6 Q60715-2; Q3UF16 Isoform 2 of Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1;Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1 E9Q7B0; Q60715-2; Q3TN84; Q3UF16; Q3TTT2; Q60715 Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=1 SV=1; Isoform 2 of Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1; Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1 PE=1 SV=2 0 4 4 0.6123 0 1 1 1 406.74075 1623.94118 1623.9405 0.42 0.00017 0/0 0 0 3041945.25 HCD 30 MS2 38.73404 359.7 110 69.3467 20858 20858 20850 QEplus033719.raw F4 297.5 294.7 375.9 355.1 477.9 357 373 3.74 2 FALSE 1.14E-05 0.0001255 0.838 -250 101281 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LYAETK [R].lYAETk.[I] N-Term(TMT6plex); K6(TMT6plex) 6 Q571A2 MKIAA4106 protein (Fragment) OS=Mus musculus OX=10090 GN=Cul2 PE=2 SV=1 H7BX52; A0A3Q4EBZ1; E0CYT5; Q571A2; Q9D4H8; Q9D4H8-2 Cullin-2 OS=Mus musculus OX=10090 GN=Cul2 PE=1 SV=1; Cullin-2 OS=Mus musculus OX=10090 GN=Cul2 PE=1 SV=1; Cullin-2 (Fragment) OS=Mus musculus OX=10090 GN=Cul2 PE=1 SV=1; MKIAA4106 protein (Fragment) OS=Mus musculus OX=10090 GN=Cul2 PE=2 SV=1; Cullin-2 OS=Mus musculus OX=10090 GN=Cul2 PE=1 SV=2; Isoform 2 of Cullin-2 OS=Mus musculus OX=10090 GN=Cul2 0 2 2 0.1152 0 1 1 1 591.86078 1182.71428 1182.71345 0.71 0.00042 0/0 0 0 9468177 HCD 30 MS2 55.3412 969.4 110 69.3517 20860 20860 20850 QEplus033719.raw F4 970.7 724.8 943.3 1080.9 978.1 1118.7 204 1.91 1 FALSE 0.005628 0.09461 0.021 -250 101297 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELVSCSNCTDYQAR [R].eLVScSNcTDYQAR.[R] N-Term(TMT6plex); C5(Carbamidomethyl); C8(Carbamidomethyl) 4 Q8C483 Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1 Q3U8N1; Q8C483; P26638; Q3U6F6 "Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=2 SV=1; Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1; Serine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Sars1 PE=1 SV=3; Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=2 SV=1" 0 2 2 0.815 0 1 1 1 966.44354 1931.87981 1931.87888 0.48 0.00047 0/0 0 0 9220375 HCD 30 MS2 0 306.5 110 69.3616 20863 20863 20861 QEplus033719.raw F4 314.5 283.2 331.9 312.1 298.3 298.9 37 5.19 1 FALSE 1.14E-05 1.01E-14 2.755 -250 101312 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYSFTTTAER [-R].gYSFTTTAER.[E] N-Term(TMT6plex) 22 O89054; Q3UAF6 Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q6IWE2; Q3UCF8; Q3TSB7; Q9QZ83; O89054; Q3UAF6; Q3UD81; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; G3UZ07; Q3TIJ9; Q61276; Q3UBP6; E9Q5F4; Q3UBQ4; P63260; Q3U939; Q3UGS0; Q3U804 "Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 0 3 3 0.6821 0 1 1 1 454.56845 1361.6908 1361.68986 0.69 0.00031 0/0 0 0 47607444 HCD 30 MS2 51.15687 456.9 16.944 69.3684 20866 20866 20861 QEplus033719.raw F4 489.9 342.7 446.2 267.5 760.6 434.3 142 3.24 2 FALSE 0.0002119 0.004249 0.52 -250 101318 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESIESEIR [R].eSIESEIR.[R] N-Term(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 0 2 2 0.3085 0 1 1 1 596.32263 1191.63799 1191.64185 -3.24 -0.00193 0/0 0 0 16782262 HCD 30 MS2 38.25119 746 60.225 69.3706 20867 20867 20861 QEplus033719.raw F4 712.3 604.5 787.6 681.9 781.7 907.9 241 2.82 1 FALSE 1.14E-05 0.00062 0.704 -250 101322 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVASGPGLEHGK [K].vVASGPGLEHGk.[V] N-Term(TMT6plex); K12(TMT6plex) 1 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 Q80X90 Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3 0 3 3 0.6444 0 1 1 1 536.98804 1608.94956 1608.94736 1.37 0.00073 0/0 0 0 10103678 HCD 30 MS2 48.92918 981.6 74.985 69.3729 20868 20868 20861 QEplus033719.raw F4 1033.9 917 996 802.6 1324.8 815.4 449 4.19 1 FALSE 1.14E-05 1.99E-12 2.32 -250 101328 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCEGVTHVCDPNVK [K].scEGVTHVcDPNVk.[F] N-Term(TMT6plex); C2(Carbamidomethyl); C9(Carbamidomethyl); K14(TMT6plex) 3 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 Q3U454; A0A0R4J0I9; Q91ZX7 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lrp1 PE=2 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 0 3 3 0.8096 0 1 1 1 687.34778 2060.02878 2060.03052 -0.84 -0.00058 0/0 0 0 11091693 HCD 30 MS2 19.47505 456 110 69.3754 20869 20869 20861 QEplus033719.raw F4 417.1 419.7 514.3 394.6 603 387.5 199 5.2 1 FALSE 1.14E-05 2.59E-12 2.298 -250 101332 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVVASDK [R].mVVASDk.[D] N-Term(TMT6plex); K7(TMT6plex) 1 Q3V3R1 "Monofunctional C1-tetrahydrofolate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Mthfd1l PE=1 SV=2" Q3V3R1 "Monofunctional C1-tetrahydrofolate synthase, mitochondrial OS=Mus musculus OX=10090 GN=Mthfd1l PE=1 SV=2" 0 2 2 0.5208 0 1 1 1 604.35968 1207.71208 1207.71207 0.01 0.00001 0/0 0 0 8293747 HCD 30 MS2 29.05983 1023.2 110 69.3779 20870 20870 20861 QEplus033719.raw F4 994 772.1 1042.8 955.9 1148.2 1226.2 444 2.4 1 FALSE 0.0004888 0.007691 0.445 -250 101342 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVVQATAEQMR [K].qVVQATAEQMR.[L] N-Term(TMT6plex) 2 Q91VX2 Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1 Q91VX2; A2AMY5 Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1; Ubiquitin-associated protein 2 OS=Mus musculus OX=10090 GN=Ubap2 PE=1 SV=1 0 2 2 0.7166 0 1 1 1 745.40332 1489.79936 1489.79943 -0.04 -0.00003 0/0 0 0 6181975.5 HCD 30 MS2 0 272.7 110 69.3804 20871 20871 20861 QEplus033719.raw F4 276.8 207.4 311.1 212 279.8 349.2 322 3.67 1 FALSE 1.14E-05 4.21E-09 1.689 -250 101352 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYSFTTTAER [-R].gYSFTTTAER.[E] N-Term(TMT6plex) 22 O89054; Q3UAF6 Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q6IWE2; Q3UCF8; Q3TSB7; Q9QZ83; O89054; Q3UAF6; Q3UD81; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; G3UZ07; Q3TIJ9; Q61276; Q3UBP6; E9Q5F4; Q3UBQ4; P63260; Q3U939; Q3UGS0; Q3U804 "Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 0 2 2 0.7391 0 1 1 1 681.349 1361.69072 1361.68986 0.63 0.00043 0/0 0 0 1678932864 HCD 30 MS2 3.322685 593.9 1.324 69.3878 20873 20873 20872 QEplus033719.raw F4 509.8 662.3 708 404.1 780.2 499 142 4.37 2 FALSE 1.14E-05 9.66E-06 1.05 -250 101360 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous INISEGNCPER [R].iNISEGNcPER.[I] N-Term(TMT6plex); C8(Carbamidomethyl) 25 Q61990; P60335; P57722 Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1;Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1;Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3 A0A2R8VHY9; Q61990; Q61990-3; A0A2R8VI71; A0A2R8VHI3; A0A2R8VI25; Q3TF69; B2M1R7; A0A2R8VHN3; Q61990-2; A0A2R8W6L5; Q8CFQ6; P60335; Q3TT81; P57722; A0A2R8VI12; A0A2R8VHG2; A0A2R8VKN0; A0A2R8VHP9; P57722-2; A0A2R8VKF0; A0A2R8VI73; E9Q7D8; A0A2R8VHZ0; A0A2R8VJY1 Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 3 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pcbp2 PE=2 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Pcbp3 protein OS=Mus musculus OX=10090 GN=Pcbp3 PE=2 SV=1; Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1 0 2 2 0.7332 0 1 1 1 759.38208 1517.75688 1517.75796 -0.71 -0.00054 0/0 0 0 6928814.5 HCD 30 MS2 0 331.4 110 69.3903 20874 20874 20872 QEplus033719.raw F4 331.8 295 361.3 285 372.3 342.8 127 3.71 3 FALSE 1.14E-05 2.72E-06 1.155 -250 101365 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSYNTASNK [R].lSYNTASNk.[T] N-Term(TMT6plex); K9(TMT6plex) 3 Q9D1R9 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=2 A0A0G2JGY8; Q9D1R9; A0A0G2JEY6 60S ribosomal protein L34 (Fragment) OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=4; 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=2; 60S ribosomal protein L34 OS=Mus musculus OX=10090 GN=Rpl34 PE=1 SV=1 0 3 3 0.4941 0 1 1 1 485.94547 1455.82184 1455.82076 0.74 0.00036 0/0 0 0 32094846 HCD 30 MS2 5.131075 659.7 53.674 69.3925 20875 20875 20872 QEplus033719.raw F4 614.1 603.8 787.4 553.4 660 739.6 296 3.4 1 FALSE 1.14E-05 0.0003628 0.749 -250 101375 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADAIGIQHAK [R].aDAIGIQHAk.[A] N-Term(TMT6plex); K10(TMT6plex) 3 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 A0A571BF58; A0A571BF46; A2AQB2 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 3 3 0.5576 0 1 1 1 494.63107 1481.87867 1481.88403 -3.62 -0.00179 0/0 0 0 9929534 HCD 30 MS2 63.58407 1098.1 110 69.395 20876 20876 20872 QEplus033719.raw F4 1331.3 643.6 1093.8 1210.6 1044.7 1264.7 310 3.21 1 FALSE 1.14E-05 0.0003809 0.745 -250 101389 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVPTPAK [K].aAVPTPAk.[K] N-Term(TMT6plex); K8(TMT6plex) 8 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; A0A087WRM5; Q8CE30; Q9CT46 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 2 2 0.6055 0 1 1 1 606.88959 1212.7719 1212.77163 0.22 0.00013 0/0 0 0 8499505 HCD 30 MS2 50.46623 1089.9 110 69.4001 20878 20878 20872 QEplus033719.raw F4 1095.4 981.8 1155.8 755.6 1399.3 1151.4 151 2.89 1 FALSE 5.44E-05 0.00265 0.571 -250 101407 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNNQFASASLDR [K].dNNQFASASLDR.[T] N-Term(TMT6plex) 1 O55029 Coatomer subunit beta' OS=Mus musculus OX=10090 GN=Copb2 PE=1 SV=2 O55029 Coatomer subunit beta' OS=Mus musculus OX=10090 GN=Copb2 PE=1 SV=2 0 2 2 0.2469 0 1 1 1 783.88141 1566.75554 1566.77096 -9.84 -0.00771 0/0 0 0 2691409.75 HCD 30 MS2 0 221.5 110 69.4051 20880 20880 20872 QEplus033719.raw F4 217.8 194 234.6 196.8 246.7 239.2 91 1.62 1 FALSE 0.0009259 0.01276 0.362 -250 101413 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELVSCSNCTDYQAR [R].eLVScSNcTDYQAR.[R] N-Term(TMT6plex); C5(Carbamidomethyl); C8(Carbamidomethyl) 4 Q8C483 Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1 Q3U8N1; Q8C483; P26638; Q3U6F6 "Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=2 SV=1; Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1; Serine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Sars1 PE=1 SV=3; Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=2 SV=1" 0 3 3 0.8646 0 1 1 1 644.63116 1931.87894 1931.87888 0.03 0.00002 0/0 0 0 28528038 HCD 30 MS2 5.671692 237.4 80.749 69.4074 20881 20881 20872 QEplus033719.raw F4 234.6 203.8 285 207.6 246.4 247 40 5.91 1 FALSE 1.14E-05 5.98E-09 1.66 -250 101430 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQVDPQK [R].mQVDPQk.[Y] N-Term(TMT6plex); K7(TMT6plex) 5 Q3THU8 "Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=2 SV=1" Q3THU8; Q3UB63; Q3U995; G5E902; Q8VEM8 "Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=2 SV=1; Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=2 SV=1; Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=2 SV=1; Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=1 SV=1; Phosphate carrier protein, mitochondrial OS=Mus musculus OX=10090 GN=Slc25a3 PE=1 SV=1" 0 2 2 0.5089 0 1 1 1 652.37622 1303.74516 1303.74443 0.56 0.00037 0/0 0 0 51193544 HCD 30 MS2 11.17021 926.4 40.966 69.4172 20884 20884 20883 QEplus033719.raw F4 780.2 671.1 1011.3 1094.6 730.1 1271 407 2.81 1 FALSE 0.0004091 0.007365 0.451 -250 101439 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTAENPEGVTEHK [K].vTAENPEGVTEHk.[V] N-Term(TMT6plex); K13(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.7013 0 1 1 1 623.67596 1869.01334 1869.01181 0.82 0.00051 0/0 0 0 25132154 HCD 30 MS2 24.26019 916.3 110 69.4197 20885 20885 20883 QEplus033719.raw F4 1071.6 413.4 832 1284.7 560.8 1335.4 401 5.49 2 FALSE 1.14E-05 6.31E-16 3.251 -250 101445 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGVHGGLINKK [K].eGVHGGLINkk.[C] N-Term(TMT6plex); K10(TMT6plex); K11(TMT6plex) 3 Q5SX50 Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=1 SV=1 Q3U7V7; Q8CEH8; Q5SX50 Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=2 SV=1; Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=2 SV=1; Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=1 SV=1 1 4 4 0.6368 0 1 1 1 460.54089 1839.14174 1839.14193 -0.1 -0.00005 0/0 0 0 73516416 HCD 30 MS2 25.74234 832.2 19.624 69.422 20886 20886 20883 QEplus033719.raw F4 892.9 752.3 918.3 638.3 960.2 831.1 197 4.57 1 FALSE 1.14E-05 3.52E-10 1.893 -250 101450 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RALASIDSK [K].rALASIDSk.[L] N-Term(TMT6plex); K9(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 1 3 3 0.4776 0 1 1 1 473.62933 1418.87345 1418.87313 0.22 0.0001 0/0 0 0 63584372 HCD 30 MS2 42.27844 1019 22.95 69.4242 20887 20887 20883 QEplus033719.raw F4 1312.1 700.4 960 886.5 1309.1 946.2 375 4.02 1 FALSE 1.14E-05 2.92E-08 1.529 -250 101461 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLGTGSFGR [K].tLGTGSFGR.[V] N-Term(TMT6plex) 9 P05132; P68181 cAMP-dependent protein kinase catalytic subunit alpha OS=Mus musculus OX=10090 GN=Prkaca PE=1 SV=3;cAMP-dependent protein kinase catalytic subunit beta OS=Mus musculus OX=10090 GN=Prkacb PE=1 SV=2 H6TMF6; P68181-4; P68181-3; P68181-2; H6TMF5; P05132-2; J9JDU9; P05132; P68181 cAMP-dependent protein kinase catalytic subunit beta transcript variant 6 (Fragment) OS=Mus musculus OX=10090 GN=Prkacb PE=2 SV=1; Isoform 4 of cAMP-dependent protein kinase catalytic subunit beta OS=Mus musculus OX=10090 GN=Prkacb; Isoform 3 of cAMP-dependent protein kinase catalytic subunit beta OS=Mus musculus OX=10090 GN=Prkacb; Isoform 2 of cAMP-dependent protein kinase catalytic subunit beta OS=Mus musculus OX=10090 GN=Prkacb; cAMP-dependent protein kinase catalytic subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Prkacb PE=1 SV=1; Isoform 2 of cAMP-dependent protein kinase catalytic subunit alpha OS=Mus musculus OX=10090 GN=Prkaca; cAMP-dependent protein kinase catalytic subunit alpha isoform (Fragment) OS=Mus musculus OX=10090 GN=Prkaca PE=2 SV=1; cAMP-dependent protein kinase catalytic subunit alpha OS=Mus musculus OX=10090 GN=Prkaca PE=1 SV=3; cAMP-dependent protein kinase catalytic subunit beta OS=Mus musculus OX=10090 GN=Prkacb PE=1 SV=2 0 2 2 0.563 0 1 1 1 562.81683 1124.62639 1124.62614 0.22 0.00013 0/0 0 0 30611156 HCD 30 MS2 21.36269 1029.8 42.561 69.4288 20889 20889 20883 QEplus033719.raw F4 1149.7 766 1106.2 919.2 1103.5 1134.2 184 2.7 2 FALSE 1.14E-05 4.61E-05 0.921 -250 101470 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAETANEEEVK [K].vAETANEEEVk.[K] N-Term(TMT6plex); K11(TMT6plex) 4 Q6NXX7 Abce1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1 Q6NXX7; Q3TJM9; Q3UHY8; Q3TIU8 Abce1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1 0 2 2 0.7551 0 1 1 1 838.95953 1676.91179 1676.9107 0.65 0.00054 0/0 0 0 17973698 HCD 30 MS2 0 676.6 110 69.4313 20890 20890 20883 QEplus033719.raw F4 691 585.8 754.7 509.6 786.8 731.5 428 5.43 1 FALSE 1.14E-05 4.17E-08 1.499 -250 101485 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KEDMTYAVR [R].kEDMTYAVR.[K] N-Term(TMT6plex); K1(TMT6plex) 5 H7BX95 Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1 F7AI47; Q6PDM2-2; Q6PDM2-3; H7BX95; Q6PDM2 Serine/arginine-rich-splicing factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1; Isoform 2 of Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1; Isoform 3 of Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1; Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=1; Serine/arginine-rich splicing factor 1 OS=Mus musculus OX=10090 GN=Srsf1 PE=1 SV=3 1 3 3 0.6174 0 1 1 1 524.29376 1570.86673 1570.86633 0.25 0.00013 0/0 0 0 26207272 HCD 30 MS2 31.72051 1265.7 69.561 69.436 20892 20892 20883 QEplus033719.raw F4 1332.3 1260 1301.1 1164.8 1282.6 1253.3 395 2.98 1 FALSE 1.14E-05 1.30E-05 1.026 -250 101493 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYIHVAK [K].kYIHVAk.[I] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 2 Q3UI57 DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=1 SV=1 Q3UI57; Q3UZH2 DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=2 SV=1 1 4 4 0.3965 0 1 1 1 387.2572 1546.00698 1546.0084 -0.92 -0.00035 0/0 0 0 12130924 HCD 30 MS2 26.60841 593.5 110 69.4385 20893 20893 20883 QEplus033719.raw F4 581 478 631.6 557.6 591.1 721.7 278 2.85 1 FALSE 0.004757 0.08358 0.052 -250 101523 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IPSEQEQLR [K].iPSEQEQLR.[A] N-Term(TMT6plex) 2 Q9EPU0 Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 PE=1 SV=2 Q9EPU0; Q9EPU0-2 Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 PE=1 SV=2; Isoform 2 of Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 0 2 2 0.6426 0 1 1 1 664.87262 1328.73796 1328.73715 0.62 0.00041 0/0 0 0 11878986 HCD 30 MS2 0 513.9 110 69.4531 20898 20898 20894 QEplus033719.raw F4 535.6 380.3 554.3 503 462.8 647.7 304 2.63 1 FALSE 1.14E-05 1.66E-05 1.006 -250 101542 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RALASIDSK [K].rALASIDSk.[L] N-Term(TMT6plex); K9(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 1 2 2 0.4508 0 1 1 1 709.94037 1418.87346 1418.87313 0.23 0.00016 0/0 0 0 5867290 HCD 30 MS2 30.95436 532.6 110 69.4581 20900 20900 20894 QEplus033719.raw F4 502.5 467.6 628.6 419.5 562.3 615.2 375 2.64 1 FALSE 0.001204 0.01633 0.317 -250 101551 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MENDESVKEEK [K-].mENDESVkEEk.[S] N-Term(TMT6plex); K8(TMT6plex); K11(TMT6plex) 8 A2ATP6 Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=2 A2ATP6; Q8C854-1; A7UQY4; Q8C854-3; F6XJA1; A2ATP5; Q8C854; Q8C854-2 Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=2; Isoform 3 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Isoform 2 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2; Myelin expression factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1; Isoform 4 of Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 1 3 3 0.6201 0 1 1 1 675.69855 2025.08109 2025.07773 1.66 0.00112 0/0 0 0 20869150 HCD 30 MS2 16.77987 1185.4 110 69.4606 20901 20901 20894 QEplus033719.raw F4 1195.7 1232.8 1348 868.6 1317 1150.4 392 3.08 1 FALSE 1.14E-05 6.92E-09 1.648 -250 101564 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAETANEEEVK [K].vAETANEEEVk.[K] N-Term(TMT6plex); K11(TMT6plex) 4 Q6NXX7 Abce1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1 Q6NXX7; Q3TJM9; Q3UHY8; Q3TIU8 Abce1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1 0 3 3 0.6728 0 1 1 1 559.6424 1676.91263 1676.9107 1.15 0.00064 0/0 0 0 19599524 HCD 30 MS2 40.92187 874.7 63.282 69.4652 20903 20903 20894 QEplus033719.raw F4 880.9 646.1 938.2 883.2 928.7 971.2 425 3.82 1 FALSE 1.14E-05 2.48E-05 0.973 -250 101600 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DFVTTAEDR [K].dFVTTAEDR.[S] N-Term(TMT6plex) 1 P27612 Phospholipase A-2-activating protein OS=Mus musculus OX=10090 GN=Plaa PE=1 SV=4 P27612 Phospholipase A-2-activating protein OS=Mus musculus OX=10090 GN=Plaa PE=1 SV=4 0 2 2 0.5806 0 1 1 1 641.82709 1282.6469 1282.64766 -0.6 -0.00038 0/0 0 0 8257946 HCD 30 MS2 27.65738 812.3 110 69.4876 20911 20911 20905 QEplus033719.raw F4 853.8 674.1 905.4 742 814.7 883.8 146 3.72 1 FALSE 1.14E-05 2.68E-05 0.966 -250 101616 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQEVECEEQR [K].lQEVEcEEQR.[L] N-Term(TMT6plex); C6(Carbamidomethyl) 5 Q6NZD2 Sorting nexin-1 OS=Mus musculus OX=10090 GN=Snx1 PE=1 SV=1 Q6NZD2; Q3TI63; Q3U4S1; Q3UDY9; Q9WV80 Sorting nexin-1 OS=Mus musculus OX=10090 GN=Snx1 PE=1 SV=1; Sorting nexin-1 OS=Mus musculus OX=10090 GN=Snx1 PE=2 SV=1; Sorting nexin-1 OS=Mus musculus OX=10090 GN=Snx1 PE=2 SV=1; Sorting nexin-1 (Fragment) OS=Mus musculus OX=10090 GN=Snx1 PE=2 SV=1; Sorting nexin-1 OS=Mus musculus OX=10090 GN=Snx1 PE=1 SV=1 0 2 2 0.6867 0 1 1 1 774.88013 1548.75298 1548.75254 0.28 0.00022 0/0 0 0 6261842.5 HCD 30 MS2 0 328.5 110 69.4926 20913 20913 20905 QEplus033719.raw F4 327.6 281 384.3 277.8 339.8 360.6 89 4.15 1 FALSE 1.14E-05 6.09E-07 1.278 -250 101649 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPITVVR [R].tPITVVR.[Q] N-Term(TMT6plex) 5 P13020-2 Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn Q3UCW8; Q3U9Q8; P13020-2; Q3TGJ9; P13020 Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Gelsolin OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=3 0 2 2 0.4163 0 1 1 1 507.82974 1014.65221 1014.6509 1.29 0.00066 0/0 0 0 13132847 HCD 30 MS2 29.41925 1058.9 97.149 69.5095 20919 20919 20916 QEplus033719.raw F4 1055.7 905.8 1162.3 946.2 1124.7 1158.5 151 2.45 1 FALSE 0.002249 0.04397 0.161 -250 101658 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQEVECEEQR [K].lQEVEcEEQR.[L] N-Term(TMT6plex); C6(Carbamidomethyl) 5 Q6NZD2 Sorting nexin-1 OS=Mus musculus OX=10090 GN=Snx1 PE=1 SV=1 Q6NZD2; Q3TI63; Q3U4S1; Q3UDY9; Q9WV80 Sorting nexin-1 OS=Mus musculus OX=10090 GN=Snx1 PE=1 SV=1; Sorting nexin-1 OS=Mus musculus OX=10090 GN=Snx1 PE=2 SV=1; Sorting nexin-1 OS=Mus musculus OX=10090 GN=Snx1 PE=2 SV=1; Sorting nexin-1 (Fragment) OS=Mus musculus OX=10090 GN=Snx1 PE=2 SV=1; Sorting nexin-1 OS=Mus musculus OX=10090 GN=Snx1 PE=1 SV=1 0 2 2 0.6896 0 1 1 1 774.87933 1548.75139 1548.75254 -0.74 -0.00057 0/0 0 0 5968617 HCD 30 MS2 18.48997 378.8 110 69.512 20920 20920 20916 QEplus033719.raw F4 374.8 322.5 445.4 325.7 390.8 413.9 80 4.22 1 FALSE 1.14E-05 3.42E-07 1.326 -250 101663 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPQGALGEPGK [R].gPQGALGEPGk.[Q] N-Term(TMT6plex); K11(TMT6plex) 2 Q02788 Collagen alpha-2(VI) chain OS=Mus musculus OX=10090 GN=Col6a2 PE=1 SV=3 Q02788; D3Z7D5 Collagen alpha-2(VI) chain OS=Mus musculus OX=10090 GN=Col6a2 PE=1 SV=3; Collagen alpha-2(VI) chain OS=Mus musculus OX=10090 GN=Col6a2 PE=1 SV=1 0 2 2 0.6069 0 1 1 1 734.93054 1468.85381 1468.8524 0.96 0.0007 0/0 0 0 5228365 HCD 30 MS2 0 411.6 110 69.5145 20921 20921 20916 QEplus033719.raw F4 393.3 437.4 449.8 275.7 506.2 407.5 325 2.62 1 FALSE 1.14E-05 1.98E-09 1.751 -250 101672 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNNQFASASLDR [K].dNNQFASASLDR.[T] N-Term(TMT6plex) 1 O55029 Coatomer subunit beta' OS=Mus musculus OX=10090 GN=Copb2 PE=1 SV=2 O55029 Coatomer subunit beta' OS=Mus musculus OX=10090 GN=Copb2 PE=1 SV=2 0 2 2 0.6152 0 1 1 1 783.88623 1566.76518 1566.77096 -3.69 -0.00289 0/0 0 0 5212739.5 HCD 30 MS2 0 293.4 110 69.5171 20922 20922 20916 QEplus033719.raw F4 292.4 254.5 303.9 266.1 342.9 300.6 122 3.69 1 FALSE 1.14E-05 4.49E-09 1.683 -250 101678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSPGEAGRPGEAGLPGAK [K].gSPGEAGRPGEAGLPGAk.[G] N-Term(TMT6plex); K18(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 3 3 0.6581 0 1 1 1 689.38715 2066.14688 2066.13947 3.59 0.00247 0/0 0 0 24578324 HCD 30 MS2 36.85185 1143.9 110 69.5196 20923 20923 20916 QEplus033719.raw F4 1014.1 1359.2 1474.4 490.9 1415.8 1109.1 452 3.89 1 FALSE 1.14E-05 3.69E-11 2.079 -250 101687 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LHDDLCEK [K].lHDDLcEk.[R] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 2 B1AX98 Leucine rich repeat containing 47 OS=Mus musculus OX=10090 GN=Lrrc47 PE=1 SV=1 B1AX98; E9PV22 Leucine rich repeat containing 47 OS=Mus musculus OX=10090 GN=Lrrc47 PE=1 SV=1; Leucine-rich repeat-containing protein 47 OS=Mus musculus OX=10090 GN=Lrrc47 PE=1 SV=1 0 3 3 0.6294 0 1 1 1 496.60297 1487.79435 1487.79284 1.02 0.0005 0/0 0 0 10122728 HCD 30 MS2 82.13805 1205.5 110 69.5221 20924 20924 20916 QEplus033719.raw F4 1285.7 965.1 1326.8 1019.5 1232.4 1403.6 313 3.4 1 FALSE 1.14E-05 0.0005957 0.707 -250 101694 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMADAMK [K].nMADAMk.[K] N-Term(TMT6plex); K7(TMT6plex) 4 Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1;ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TED3; Q3UEA1; Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate (pro-S-)-lyase (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 0 2 2 0.4528 0 1 1 1 619.83667 1238.66606 1238.66374 1.88 0.00116 0/0 0 0 9452891 HCD 30 MS2 12.7663 1092.4 110 69.5246 20925 20925 20916 QEplus033719.raw F4 1103 1057.4 1232.2 861 1154.1 1146.8 277 3.07 2 FALSE 0.0001603 0.003765 0.534 -250 101711 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVPTPAK [K].aAVPTPAk.[K] N-Term(TMT6plex); K8(TMT6plex) 8 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; A0A087WRM5; Q8CE30; Q9CT46 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 3 3 0.3529 0 1 1 1 404.92896 1212.77231 1212.77163 0.56 0.00023 0/0 0 0 13173174 HCD 30 MS2 11.25514 508.6 110 69.5344 20928 20928 20927 QEplus033719.raw F4 520.6 438.5 522 352.9 654.2 563.7 149 2.38 1 FALSE 0.0007816 0.01081 0.391 -250 101733 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTIAEER [R].lTIAEER.[QD] N-Term(TMT6plex) 5 P62702 "40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2" V9GWY0; Q545F8; P62702; Q3V1Z5; Q3UXQ6 "40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Gm15013 PE=3 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1; 40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4l PE=2 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1" 0 2 2 0.1149 0 1 1 1 530.81421 1060.62114 1060.61999 1.09 0.00058 0/0 0 0 47834504 HCD 30 MS2 57.00521 814.6 19.475 69.5414 20931 20931 20927 QEplus033719.raw F4 811.1 659.9 886.9 819.9 741.4 968.5 239 2.61 1 FALSE 0.0002019 0.004132 0.524 -250 101743 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAETIK [K].vAETIk.[V] N-Term(TMT6plex); K6(TMT6plex) 2 Q8K009 Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=2 D3Z6B9; Q8K009 Formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=1; Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=2 0 2 2 0.1039 0 1 1 1 559.86261 1118.71794 1118.71853 -0.53 -0.00029 0/0 0 0 19583094 HCD 30 MS2 42.30275 1432.7 110 69.5439 20932 20932 20927 QEplus033719.raw F4 1439.3 1124.9 1465.6 1345.6 1672.1 1548.8 209 2.31 1 FALSE 0.00348 0.06746 0.094 -250 101760 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPEDLEK [K].sPEDLEk.[L] N-Term(TMT6plex); K7(TMT6plex) 3 P06745 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4 P06745; A0A0U1RP97; A0A0U1RQ18 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4; Glucose-6-phosphate isomerase 1 (Fragment) OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase (Fragment) OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1 0 2 2 0.4145 0 1 1 1 638.36469 1275.72209 1275.71965 1.91 0.00122 0/0 0 0 19505554 HCD 30 MS2 45.0158 1000.5 60.811 69.5487 20934 20934 20927 QEplus033719.raw F4 989.3 804.4 1079.9 932 1003.4 1193.9 397 2.34 1 FALSE 0.003235 0.06316 0.106 -250 101772 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MREDYDSVEQDGDEPGPQR [R-].mREDYDSVEQDGDEPGPQR.[S] N-Term(TMT6plex) 4 A0A0G2JFX7; Q9CWZ3-2 RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a PE=1 SV=1;Isoform 2 of RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a A0A0G2JFX7; Q9CWZ3; A0A0G2JEA9; Q9CWZ3-2 RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a PE=1 SV=1; RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a PE=1 SV=4; RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a PE=1 SV=1; Isoform 2 of RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a 1 3 3 0.8771 0 1 1 1 818.03534 2452.09146 2452.08841 1.25 0.00102 0/0 0 0 5771065.5 HCD 30 MS2 0 132.2 110 69.5537 20936 20936 20927 QEplus033719.raw F4 134.6 129.6 160.2 100.4 142.3 125.8 30 7.65 2 FALSE 1.14E-05 6.31E-16 3.686 -250 101776 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAPPDSK [R].iAPPDSk.[L] N-Term(TMT6plex); K7(TMT6plex) 2 Q3U425 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pom121 PE=1 SV=1 Q3U425; Q6A036 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pom121 PE=1 SV=1; MKIAA0618 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0618 PE=4 SV=1 0 2 2 0.2743 0 1 1 1 593.36829 1185.7293 1185.72434 4.18 0.00248 0/0 0 0 5306805.5 HCD 30 MS2 34.52478 687 110 69.5562 20937 20937 20927 QEplus033719.raw F4 623.9 616.1 722.2 602.7 784.1 773.1 267 2.26 1 FALSE 0.005389 0.09204 0.029 -250 101786 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCEVVVSGK [K].gcEVVVSGk.[L] N-Term(TMT6plex); C2(Carbamidomethyl); K9(TMT6plex) 6 Q5YLW3 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1 Q9D0A2; D3YV43; Q9CZP6; Q3UCL7; O89068; Q5YLW3 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; Ribosomal protein S3 (Fragment) OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1 0 2 2 0.5688 0 1 1 1 696.89801 1392.78874 1392.79211 -2.41 -0.00168 0/0 0 0 10035053 HCD 30 MS2 17.70086 748.4 110 69.5635 20939 20939 20938 QEplus033719.raw F4 798.8 533.4 766.8 719 707.1 965.2 427 2.76 1 FALSE 1.14E-05 2.10E-06 1.176 -250 101797 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVFQNYGK [R].rVFQNYGk.[Y] N-Term(TMT6plex); K8(TMT6plex) 6 B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 Q4FK88; Q3US43; Q4FJV4; Q3U5N9; A0A494BBD8; B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 1 3 3 0.5087 0 1 1 1 490.62558 1469.86219 1469.8629 -0.49 -0.00024 0/0 0 0 55098488 HCD 30 MS2 32.24371 1005.7 29.156 69.568 20941 20941 20938 QEplus033719.raw F4 1273.9 1130.8 1080.5 669.5 1126.7 753 324 3.46 1 FALSE 1.14E-05 0.0001996 0.8 -250 101803 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HAFNLK [K].hAFNLk.[Q] N-Term(TMT6plex); K6(TMT6plex) 4 P56399 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 P56399; Q3U4W8; D3Z4K7; D3YYA5 Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase 5 (Fragment) OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=8; Ubiquitin carboxyl-terminal hydrolase 5 (Fragment) OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1 0 3 3 0.3289 0 1 1 1 396.58163 1187.73035 1187.7301 0.21 0.00008 0/0 0 0 24785420 HCD 30 MS2 31.73143 637.7 53.619 69.5703 20942 20942 20938 QEplus033719.raw F4 960.7 410.4 524.5 544.4 880.7 505.3 319 2.98 1 FALSE 0.0005373 0.008215 0.435 -250 101805 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGVNGFGR [K].vGVNGFGR.[I] N-Term(TMT6plex) 7 A0A0A0MQF6 Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1 Q2VWQ4; A0A1D5RLD8; A0A0A0MQF6; S4R1N5; P16858; S4R1W1; Q4VBD1 GAPDH (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=2 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm10358 PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=1; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gapdh PE=1 SV=2; Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gm3839 PE=1 SV=1; Gapdh protein OS=Mus musculus OX=10090 GN=Gapdh PE=2 SV=1 0 2 2 0.5533 0 1 1 1 517.80145 1034.59563 1034.59444 1.14 0.00059 0/0 0 0 146948208 HCD 30 MS2 19.39729 996.8 10.299 69.5725 20943 20943 20938 QEplus033719.raw F4 1047.2 698.6 1045 1020.1 947.3 1222.6 226 2.91 1 FALSE 3.35E-05 0.001321 0.637 -250 101814 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELGNDAYK [K].eLGNDAYk.[K] N-Term(TMT6plex); K8(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 2 2 0.4301 0 1 1 1 684.38086 1367.75444 1367.7571 -1.94 -0.00133 0/0 0 0 13462651 HCD 30 MS2 23.32696 868.7 110 69.5751 20944 20944 20938 QEplus033719.raw F4 795.9 711.4 1012.8 738.4 1007.6 946.3 278 2.79 1 FALSE 1.14E-05 0.0005525 0.714 -250 101818 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSEGVDIK [K].dSEGVDIk.[L] N-Term(TMT6plex); K8(TMT6plex) 14 O70318 Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2 Q811B2; B6ZHC6; O70318; B6ZHD0; Q80UE5; Q811C0; Q8CGJ6; Q80UE3; Q80UE4; A0A1W2P6I5; B6ZHC5; B6ZHC7; Q8C928; Q3UNQ6 Epb4.1l2 protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; 4.1G protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Epb4.1l2 protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Protein 4.1G OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1 0 2 2 0.157 0 1 1 1 660.87402 1320.74077 1320.74112 -0.26 -0.00017 0/0 0 0 10164373 HCD 30 MS2 0 863.2 110 69.5776 20945 20945 20938 QEplus033719.raw F4 895.2 745.8 981.7 643.5 988.5 924.5 458 2.42 1 FALSE 1.14E-05 0.0003676 0.748 -250 101832 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVGVEPAADGK [K].tVGVEPAADGk.[G] N-Term(TMT6plex); K11(TMT6plex) 2 Q5M9N5 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1 Q5M9N5; Q5M9J8 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1; 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1 0 2 2 0.6148 0 1 1 1 751.43713 1501.86699 1501.86263 2.9 0.00218 0/0 0 0 3708610.5 HCD 30 MS2 28.67909 311.4 110 69.5826 20947 20947 20938 QEplus033719.raw F4 310.9 253.2 342.9 272 337.3 352.3 444 3.79 1 FALSE 1.14E-05 3.21E-09 1.711 -250 101838 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPEDLEK [K].sPEDLEk.[L] N-Term(TMT6plex); K7(TMT6plex) 3 P06745 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4 P06745; A0A0U1RP97; A0A0U1RQ18 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4; Glucose-6-phosphate isomerase 1 (Fragment) OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase (Fragment) OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1 0 2 2 0.245 0 1 1 1 638.3584 1275.70952 1275.71965 -7.94 -0.00507 0/0 0 0 21502136 HCD 30 MS2 32.2517 1090.2 58.836 69.5849 20948 20948 20938 QEplus033719.raw F4 1096.5 839.8 1165.7 1048.2 1072.3 1318.8 311 2.49 1 FALSE 0.006767 0.1078 -0.014 -250 101842 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPAMYENDK [K].nPAMYENDk.[-] N-Term(TMT6plex); K9(TMT6plex) 2 Q9CQ69 Cytochrome b-c1 complex subunit 8 OS=Mus musculus OX=10090 GN=Uqcrq PE=1 SV=3 Q9CQ69; I7HPX6 Cytochrome b-c1 complex subunit 8 OS=Mus musculus OX=10090 GN=Uqcrq PE=1 SV=3; Complex III subunit 8 OS=Mus musculus OX=10090 GN=Uqcrq PE=1 SV=1 0 2 2 0.6169 0 1 1 1 770.39606 1539.78484 1539.78775 -1.89 -0.00146 0/0 0 0 13210897 HCD 30 MS2 0 536.8 110 69.5922 20950 20950 20949 QEplus033719.raw F4 573.5 372.9 573.5 575.2 461.2 664.4 193 3.55 1 FALSE 1.14E-05 6.95E-06 1.077 -250 101849 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STTPDITGYR [R].sTTPDITGYR.[I] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.6823 0 1 1 1 670.35706 1339.70683 1339.70551 0.99 0.00066 0/0 0 0 18443896 HCD 30 MS2 0 909.3 110 69.5948 20951 20951 20949 QEplus033719.raw F4 925.3 857.1 1041.1 1020.6 733.9 878 224 3.84 3 FALSE 1.14E-05 6.49E-05 0.893 -250 101877 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVTALDR [K].vVTALDR.[T] N-Term(TMT6plex) 7 A0A1D5RMM8 Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=2 A0A0J9YV30; Q3UG90; Q8VI36-2; F8VQ28; Q8VI36; A0A1D5RMM8; Q99LE7 Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=1; Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=2 SV=1; Isoform Alpha of Paxillin OS=Mus musculus OX=10090 GN=Pxn; Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=1; Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=1; Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=2; Paxillin (Fragment) OS=Mus musculus OX=10090 GN=Pxn PE=2 SV=1 0 2 2 0.3189 0 1 1 1 501.81088 1002.61449 1002.61451 -0.02 -0.00001 0/0 0 0 11937417 HCD 30 MS2 42.5418 1124.1 71.773 69.604 20955 20955 20949 QEplus033719.raw F4 1192.4 953.1 1264.5 1003.5 1145.4 1185.4 133 2.54 1 FALSE 0.001762 0.03008 0.216 -250 101886 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANKPFPVR [K].aNkPFPVR.[L] N-Term(TMT6plex); K3(TMT6plex) 2 P23475 X-ray repair cross-complementing protein 6 OS=Mus musculus OX=10090 GN=Xrcc6 PE=1 SV=5 A0A0R4J187; P23475 ATP-dependent DNA helicase 2 subunit 1 OS=Mus musculus OX=10090 GN=Xrcc6 PE=1 SV=1; X-ray repair cross-complementing protein 6 OS=Mus musculus OX=10090 GN=Xrcc6 PE=1 SV=5 0 3 3 0.0615 0 1 1 1 462.95944 1386.86377 1386.86218 1.15 0.00053 0/0 0 0 6269830.5 HCD 30 MS2 41.00199 902.5 110 69.6065 20956 20956 20949 QEplus033719.raw F4 886 777.7 956.6 701.3 1008.2 1085.5 338 1.79 1 FALSE 0.002056 0.03756 0.184 -250 101894 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQPDTVQDALR [K].gQPDTVQDALR.[F] N-Term(TMT6plex) 2 Q6PB44 Tyrosine-protein phosphatase non-receptor type 23 OS=Mus musculus OX=10090 GN=Ptpn23 PE=1 SV=2 Q6PB44; Q6PB44-2 Tyrosine-protein phosphatase non-receptor type 23 OS=Mus musculus OX=10090 GN=Ptpn23 PE=1 SV=2; Isoform 2 of Tyrosine-protein phosphatase non-receptor type 23 OS=Mus musculus OX=10090 GN=Ptpn23 0 2 2 0.585 0 1 1 1 714.88525 1428.76323 1428.76442 -0.83 -0.0006 0/0 0 0 5186075.5 HCD 30 MS2 0 349.9 110 69.609 20957 20957 20949 QEplus033719.raw F4 341 292.1 400.8 302.6 359.9 403.1 256 3.06 1 FALSE 1.14E-05 2.41E-07 1.355 -250 101930 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQAQMK [K].lQAQMk.[D] N-Term(TMT6plex); K6(TMT6plex) 16 Q69ZX3; Q5SV64; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; Q811J9; Q80T68; A0A2R8VHF9; A0A338P6K2; O08638-2; Q7TQJ6; O08638; Q5SV64; Q3UH59; Q8VDD5; E9QPE7; Q6PB65; Q4KMN4; Q99JJ3; Q61879 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 0 2 2 0.293 0 1 1 1 588.86279 1176.71831 1176.71749 0.7 0.00041 0/0 0 0 62217920 HCD 30 MS2 51.78602 1070.1 15.685 69.6261 20963 20963 20960 QEplus033719.raw F4 1033.6 1098.8 1209.7 792.5 1271.4 1014.4 436 2.56 3 FALSE 0.004365 0.07914 0.064 -250 101940 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELEEISER [R].eLEEISER.[L] N-Term(TMT6plex) 12 Q5SX40; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; Q5SX39; G3UW82; B2RWX0; B2RQQ1; I6L963; B1AR69; B2RY26; B2RXX9; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.2871 0 1 1 1 617.33014 1233.653 1233.65241 0.48 0.00029 0/0 0 0 31768678 HCD 30 MS2 27.38937 1006.8 60.818 69.6284 20964 20964 20960 QEplus033719.raw F4 1077.3 416.2 713 1964.4 556.1 1314 243 3.1 4 FALSE 1.14E-05 0.0001093 0.85 -250 101941 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELEELSER [R].eLEELSER.[L] N-Term(TMT6plex) 2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541; A2AQP0 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-7B OS=Mus musculus OX=10090 GN=Myh7b PE=3 SV=1 0 2 2 0.2871 0 1 2 2 617.33014 1233.653 1233.65241 0.48 0.00029 0/0 0 0 31768678 HCD 30 MS2 27.38937 1006.8 60.818 69.6284 20964 20964 20960 QEplus033719.raw F4 1077.3 416.2 713 1964.4 556.1 1314 243 3.1 2 FALSE 1.14E-05 0.0001093 0.85 -250 101948 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAAQCSHAAVSAYK [K].vAAQcSHAAVSAYk.[Q] N-Term(TMT6plex); C5(Carbamidomethyl); K14(TMT6plex) 1 Q8R2Y8 "Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ptrh2 PE=1 SV=1" Q8R2Y8 "Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ptrh2 PE=1 SV=1" 0 3 3 0.7717 0 1 1 1 641.01709 1921.03672 1921.03659 0.07 0.00004 0/0 0 0 23345890 HCD 30 MS2 24.36845 916.6 85.26 69.6307 20965 20965 20960 QEplus033719.raw F4 910.8 857 1017.2 881.6 929.7 903.1 410 4.6 1 FALSE 1.14E-05 9.46E-11 2.002 -250 101956 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPDMVAGEK [K].nPDMVAGEk.[R] N-Term(TMT6plex); K9(TMT6plex) 1 Q99L45 Eukaryotic translation initiation factor 2 subunit 2 OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1 Q99L45 Eukaryotic translation initiation factor 2 subunit 2 OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1 0 2 2 0.6159 0 1 1 1 709.89044 1418.77361 1418.77137 1.58 0.00112 0/0 0 0 18442690 HCD 30 MS2 45.48191 988.4 76.739 69.633 20966 20966 20960 QEplus033719.raw F4 1037.1 843.5 1116.8 748.7 1089 1095.5 346 3.28 1 FALSE 1.14E-05 1.97E-06 1.181 -250 101976 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIASDYK [R].nIASDYk.[Y] N-Term(TMT6plex); K7(TMT6plex) 4 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; A0A571BF46; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 2 2 0.2701 0 1 1 1 634.86584 1268.72441 1268.72507 -0.52 -0.00033 0/0 0 0 6636016 HCD 30 MS2 59.41484 757.8 110 69.643 20970 20970 20960 QEplus033719.raw F4 811.9 353.9 750.4 1100.8 433 1096.5 328 2.74 1 FALSE 0.0001187 0.00316 0.553 -250 102009 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETIMNQEK [K].eTIMNQEk.[L] N-Term(TMT6plex); K8(TMT6plex) 2 Q3UJR8; Q64152 Transcription factor BTF3 OS=Mus musculus OX=10090 GN=Btf3 PE=2 SV=1;Transcription factor BTF3 OS=Mus musculus OX=10090 GN=Btf3 PE=1 SV=3 Q3UJR8; Q64152 Transcription factor BTF3 OS=Mus musculus OX=10090 GN=Btf3 PE=2 SV=1; Transcription factor BTF3 OS=Mus musculus OX=10090 GN=Btf3 PE=1 SV=3 0 2 2 0.3665 0 1 1 1 725.90308 1450.79888 1450.79759 0.89 0.00064 0/0 0 0 67344504 HCD 30 MS2 5.35016 896.2 30.264 69.6572 20975 20975 20971 QEplus033719.raw F4 950.1 695.4 998.7 665 1044.6 1023.6 392 3.52 2 FALSE 0.0007436 0.01057 0.395 -250 102040 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ICDECNYGSYQGR [R].icDEcNYGSYQGR.[C] N-Term(TMT6plex); C2(Carbamidomethyl); C5(Carbamidomethyl) 1 P83870 PHD finger-like domain-containing protein 5A OS=Mus musculus OX=10090 GN=Phf5a PE=1 SV=1 P83870 PHD finger-like domain-containing protein 5A OS=Mus musculus OX=10090 GN=Phf5a PE=1 SV=1 0 2 2 0.9417 0 1 1 1 925.90466 1850.80205 1850.7999 1.16 0.00108 0/0 0 0 6705822.5 HCD 30 MS2 0 244.2 110 69.6665 20979 20979 20971 QEplus033719.raw F4 234.3 276.1 279.4 171.5 282.6 221.4 14 4.29 1 FALSE 1.14E-05 1.74E-07 1.382 -250 102045 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQVEESGAGSSLK [K].eQVEESGAGSSLk.[L] N-Term(TMT6plex); K13(TMT6plex) 3 B2RWW2 Golgb1 protein OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1 B2RWW2; E9QAH1; E9PVZ8 "Golgb1 protein OS=Mus musculus OX=10090 GN=Golgb1 PE=2 SV=1; Golgi autoantigen, golgin subfamily b, macrogolgin 1 OS=Mus musculus OX=10090 GN=Golgb1 PE=1 SV=1; Golgi autoantigen, golgin subfamily b, macrogolgin 1 OS=Mus musculus OX=10090 GN=Golgb1 PE=1 SV=1" 0 2 2 0.5757 0 1 1 1 889.98163 1778.95598 1778.95363 1.32 0.00118 0/0 0 0 2274612.75 HCD 30 MS2 0 135.2 110 69.6691 20980 20980 20971 QEplus033719.raw F4 138.9 126.7 154.6 107.6 150.7 132.5 398 4.36 1 FALSE 1.14E-05 2.02E-14 2.699 -250 102049 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGVHGGLINKK [K].eGVHGGLINkk.[C] N-Term(TMT6plex); K10(TMT6plex); K11(TMT6plex) 3 Q5SX50 Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=1 SV=1 Q3U7V7; Q8CEH8; Q5SX50 Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=2 SV=1; Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=2 SV=1; Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=1 SV=1 1 3 3 0.686 0 1 1 1 613.71912 1839.1428 1839.14193 0.47 0.00029 0/0 0 0 46725552 HCD 30 MS2 18.49786 863.3 40.501 69.6713 20981 20981 20971 QEplus033719.raw F4 934.7 803.3 936.8 599.6 1047.9 857.7 193 5 1 FALSE 1.14E-05 7.46E-12 2.211 -250 102056 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNEQMVSEKPSESK [R].sNEQMVSEkPSESk.[T] N-Term(TMT6plex); K9(TMT6plex); K14(TMT6plex) 11 Q8CE80 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1 Q8CE04; P51125-7; A0A338P6J9; Q921U7; P51125-6; Q8CB83; Q8C281; Q8CE80; P51125; P51125-3; P51125-2 Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 7 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Isoform 6 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=2 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpain inhibitor OS=Mus musculus OX=10090 GN=Cast PE=1 SV=1; Calpastatin OS=Mus musculus OX=10090 GN=Cast PE=1 SV=2; Isoform 3 of Calpastatin OS=Mus musculus OX=10090 GN=Cast; Isoform 2 of Calpastatin OS=Mus musculus OX=10090 GN=Cast 0 3 3 0.7901 0 1 1 1 756.41083 2267.21793 2267.21562 1.02 0.00077 0/0 0 0 22849028 HCD 30 MS2 3.960825 906.1 110 69.6811 20984 20984 20982 QEplus033719.raw F4 927.1 919.5 988.9 683.2 1097.7 820.4 411 4.24 1 FALSE 1.14E-05 8.05E-14 2.585 -250 102106 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VELSNGEK [R].vELSNGEk.[R] N-Term(TMT6plex); K8(TMT6plex) 3 P84104 Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3 PE=1 SV=1 P84104-2; P84104; Q9D6W4 Isoform Short of Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3; Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3 PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf3 PE=2 SV=1 0 2 2 0.15 0 1 1 1 667.39093 1333.77458 1333.77275 1.37 0.00092 0/0 0 0 3948666.25 HCD 30 MS2 27.65672 520.8 110 69.6984 20991 20991 20982 QEplus033719.raw F4 506 401 588.7 486.7 526.4 615.7 505 2.4 1 FALSE 0.000565 0.008637 0.428 -250 102115 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDGNLSTQTGETR [R].lDGNLSTQTGETR.[V] N-Term(TMT6plex) 1 Q8BYA0 Tubulin-specific chaperone D OS=Mus musculus OX=10090 GN=Tbcd PE=1 SV=1 Q8BYA0 Tubulin-specific chaperone D OS=Mus musculus OX=10090 GN=Tbcd PE=1 SV=1 0 2 2 0.689 0 1 1 1 810.92389 1620.8405 1620.83904 0.9 0.00073 0/0 0 0 3736907 HCD 30 MS2 0 252.7 110 69.7009 20992 20992 20982 QEplus033719.raw F4 240.8 237.5 264.7 224.4 292.5 256.1 277 3.44 1 FALSE 1.14E-05 1.04E-12 2.373 -250 102121 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTFAAMGR [R].dTFAAMGR.[L] N-Term(TMT6plex) 4 Q545G1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Mylpf PE=1 SV=1 Q545G1; F6ULR7; A0A0U1RP93; A0A0U1RQ36 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Mylpf PE=1 SV=1; Myosin regulatory light chain 2, skeletal muscle isoform (Fragment) OS=Mus musculus OX=10090 GN=Mylpf PE=1 SV=8; Myosin regulatory light chain 2, skeletal muscle isoform OS=Mus musculus OX=10090 GN=Mylpf PE=1 SV=1; Myosin regulatory light chain 2, skeletal muscle isoform (Fragment) OS=Mus musculus OX=10090 GN=Mylpf PE=1 SV=1" 0 2 2 0.6936 0 1 1 1 549.28461 1097.56194 1097.5611 0.77 0.00042 0/0 0 0 64035948 HCD 30 MS2 12.16978 655.9 20.404 69.7082 20994 20994 20993 QEplus033719.raw F4 726.1 186.6 511.5 1268.9 217.4 1025 109 2.97 1 FALSE 1.14E-05 0.000386 0.744 -250 102128 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTVQGFK [K].nTVQGFk.[R] N-Term(TMT6plex); K7(TMT6plex) 5 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q8C6R3; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 0 2 2 0.5793 0 1 1 1 626.37701 1251.74675 1251.74614 0.49 0.0003 0/0 0 0 37771576 HCD 30 MS2 16.09523 1131.4 61.775 69.7105 20995 20995 20993 QEplus033719.raw F4 1143.3 792.9 1241.9 948.7 1358.4 1303.1 384 3.09 1 FALSE 0.0002419 0.004892 0.504 -250 102134 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVVVQK [K].dVVVQk.[Q] N-Term(TMT6plex); K6(TMT6plex) 6 Q3TWL6 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1 Q3TI61; Q3TWL6; Q3TW71; Q3U9Y8; Q8VDM4; Q3TXV1 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1 0 2 2 0.3256 0 1 1 1 573.36847 1145.72966 1145.72943 0.2 0.00012 0/0 0 0 53263356 HCD 30 MS2 33.98572 908 22.589 69.7127 20996 20996 20993 QEplus033719.raw F4 947.5 765 969.7 823.6 965.8 976.6 449 2.58 1 FALSE 0.002258 0.04445 0.159 -250 102142 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETIMNQEK [K].eTIMNQEk.[L] N-Term(TMT6plex); K8(TMT6plex) 2 Q3UJR8; Q64152 Transcription factor BTF3 OS=Mus musculus OX=10090 GN=Btf3 PE=2 SV=1;Transcription factor BTF3 OS=Mus musculus OX=10090 GN=Btf3 PE=1 SV=3 Q3UJR8; Q64152 Transcription factor BTF3 OS=Mus musculus OX=10090 GN=Btf3 PE=2 SV=1; Transcription factor BTF3 OS=Mus musculus OX=10090 GN=Btf3 PE=1 SV=3 0 3 3 0.4045 0 1 1 1 484.27161 1450.80027 1450.79759 1.85 0.00089 0/0 0 0 48666992 HCD 30 MS2 30.38039 763.4 31.092 69.715 20997 20997 20993 QEplus033719.raw F4 1261.1 485.3 703.2 657.9 779.8 693.3 363 2.67 2 FALSE 0.002166 0.04105 0.171 -250 102159 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEGQGDEPTPK [K].lEGQGDEPTPk.[Q] N-Term(TMT6plex); K11(TMT6plex) 2 Q9CX34 Protein SGT1 homolog OS=Mus musculus OX=10090 GN=Sugt1 PE=1 SV=3 Q9CRG3; Q9CX34 CS domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sugt1 PE=2 SV=1; Protein SGT1 homolog OS=Mus musculus OX=10090 GN=Sugt1 PE=1 SV=3 0 2 2 0.7219 0 1 1 1 814.94934 1628.89141 1628.88957 1.13 0.00092 0/0 0 0 5779091 HCD 30 MS2 16.50091 472.5 110 69.72 20999 20999 20993 QEplus033719.raw F4 471.6 379.8 479.8 393.3 641.6 469.2 423 3.56 1 FALSE 1.14E-05 2.73E-08 1.534 -250 102173 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQDAPSGQVVR [K].lQDAPSGQVVR.[G] N-Term(TMT6plex) 2 P01030 SWISS-PROT:P01030 (Bos taurus) similar to Complement C4-A precursor ENSEMBL:ENSBTAP00000007350; P01030 (Bos taurus) similar to Complement C4-A precursor; SWISS-PROT:P01030 (Bos taurus) similar to Complement C4-A precursor 0 2 2 0.6742 0 1 1 1 699.90265 1398.79802 1398.79024 5.56 0.00389 0/0 0 0 4062351.25 HCD 30 MS2 53.12105 443.6 110 69.725 21001 21001 20993 QEplus033719.raw F4 448.8 218.7 363.4 381.4 757 492.4 321 3.53 1 TRUE 1.14E-05 1.03E-07 1.425 -250 102202 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WFHQQK [K].wFHQQk.[N] N-Term(TMT6plex); K6(TMT6plex) 3 Q4FK49 Inorganic diphosphatase OS=Mus musculus OX=10090 GN=Ppa1 PE=1 SV=1 Q8BTY3; Q3UA53; Q4FK49 Inorganic diphosphatase OS=Mus musculus OX=10090 GN=Ppa1 PE=2 SV=1; Inorganic diphosphatase OS=Mus musculus OX=10090 GN=Ppa1 PE=2 SV=1; Inorganic diphosphatase OS=Mus musculus OX=10090 GN=Ppa1 PE=1 SV=1 0 3 3 0.3426 0 1 1 1 444.59283 1331.76395 1331.76246 1.12 0.0005 0/0 0 0 36975248 HCD 30 MS2 9.74081 783.9 51.948 69.7414 21007 21007 21004 QEplus033719.raw F4 830.8 674.3 832.2 649.3 869.9 846.7 409 3.59 1 FALSE 0.001142 0.01531 0.329 -250 102226 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGPSEDDVDPPK [K].kGPSEDDVDPPk.[S] N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex) 5 Q9JIK5 Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3 Q9CSR3; Q6PCP0; Q9JIK5; Q3ULC7; Q9CWZ5 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=2; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=1; Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=2 1 3 3 0.5 0 1 1 1 657.70569 1971.10251 1971.10018 1.18 0.00078 0/0 0 0 12843007 HCD 30 MS2 19.11039 948.6 110 69.7484 21010 21010 21004 QEplus033719.raw F4 944.3 767.9 1083 681.8 1119.7 1094.8 408 3.64 1 FALSE 1.14E-05 3.41E-08 1.516 -250 102234 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHPLEK [K].iHPLEk.[V] N-Term(TMT6plex); K6(TMT6plex) 1 Q9Z277 Tyrosine-protein kinase BAZ1B OS=Mus musculus OX=10090 GN=Baz1b PE=1 SV=2 Q9Z277 Tyrosine-protein kinase BAZ1B OS=Mus musculus OX=10090 GN=Baz1b PE=1 SV=2 0 3 3 0.2452 0 1 1 2 398.92532 1194.76142 1194.76106 0.3 0.00012 0/0 0 0 17022828 HCD 30 MS2 14.15474 498.2 103.443 69.7507 21011 21011 21004 QEplus033719.raw F4 438.2 437.2 561.9 334.1 661.6 556.4 99 2.61 1 FALSE 0.006697 0.1064 -0.011 -250 102244 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQIVEVAGDDK [R].hQIVEVAGDDk.[Y] N-Term(TMT6plex); K11(TMT6plex) 4 Q8BQW4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Arhgap1 PE=2 SV=1 Q8BQW4; A0A2X0SSA9; Q5FWK3; A2AH25 Uncharacterized protein OS=Mus musculus OX=10090 GN=Arhgap1 PE=2 SV=1; ARHGAP1 (Fragment) OS=Mus musculus OX=10090 GN=ARHGAP1 PE=4 SV=1; Rho GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Arhgap1 PE=1 SV=1; Rho GTPase-activating protein 1 OS=Mus musculus OX=10090 GN=Arhgap1 PE=1 SV=1 0 3 3 0.6718 0 1 1 1 556.98187 1668.93106 1668.93211 -0.62 -0.00035 0/0 0 0 16028081 HCD 30 MS2 32.67832 1146.2 90.162 69.753 21012 21012 21004 QEplus033719.raw F4 1274.3 1046.7 1210.8 804.2 1449.4 1091.9 391 4.51 1 FALSE 1.14E-05 1.83E-08 1.567 -250 102253 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVDYSGLR [R].eVDYSGLR.[V] N-Term(TMT6plex) 4 Q4VAA2 Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3 PE=1 SV=2 Q4VAA2-2; Q4VAA2; A0A087WRM0; A0A087WNP6 Isoform 2 of Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3; Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3 PE=1 SV=2; Protein CDV3 (Fragment) OS=Mus musculus OX=10090 GN=Cdv3 PE=1 SV=1; Protein CDV3 OS=Mus musculus OX=10090 GN=Cdv3 PE=1 SV=1 0 2 2 0.6272 0 1 1 1 584.31378 1167.62029 1167.62072 -0.37 -0.00022 0/0 0 0 14734565 HCD 30 MS2 11.34731 1263 108.001 69.7555 21013 21013 21004 QEplus033719.raw F4 1318.9 1019.7 1365.5 1112.8 1370.4 1390.7 124 3.38 1 FALSE 1.14E-05 0.0002617 0.777 -250 102258 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVDDGLK [K].dVDDGLk.[A] N-Term(TMT6plex); K7(TMT6plex) 3 Q5SWU9 Acetyl-CoA carboxylase 1 OS=Mus musculus OX=10090 GN=Acaca PE=1 SV=1 V9GWS0; Q5SWU9-2; Q5SWU9 Acetyl-CoA carboxylase 1 (Fragment) OS=Mus musculus OX=10090 GN=Acaca PE=1 SV=1; Isoform 2 of Acetyl-CoA carboxylase 1 OS=Mus musculus OX=10090 GN=Acaca; Acetyl-CoA carboxylase 1 OS=Mus musculus OX=10090 GN=Acaca PE=1 SV=1 0 2 2 0.5 0 1 1 1 610.35101 1219.69475 1219.69344 1.07 0.00066 0/0 0 0 13406455 HCD 30 MS2 24.26708 1215.3 110 69.758 21014 21014 21004 QEplus033719.raw F4 1178.8 1053.6 1304.9 1016.6 1421.9 1315.9 451 2.76 1 FALSE 0.0001603 0.00381 0.533 -250 102266 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQAQMK [K].lQAQMk.[D] N-Term(TMT6plex); K6(TMT6plex) 16 Q69ZX3; Q5SV64; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; Q811J9; Q80T68; A0A2R8VHF9; A0A338P6K2; O08638-2; Q7TQJ6; O08638; Q5SV64; Q3UH59; Q8VDD5; E9QPE7; Q6PB65; Q4KMN4; Q99JJ3; Q61879 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 0 3 3 0.347 0 1 1 1 392.91086 1176.71802 1176.71749 0.46 0.00018 0/0 0 0 12196698 HCD 30 MS2 4.612584 555.3 84.489 69.7653 21016 21016 21015 QEplus033719.raw F4 484.5 562.2 674.2 394.4 664.4 552.2 436 2.19 3 FALSE 0.002182 0.0419 0.168 -250 102286 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGDYGSLSGR [R].vGDYGSLSGR.[E] N-Term(TMT6plex) 2 Q9ES94 Cathepsin X OS=Mus musculus OX=10090 GN=Ctsz PE=2 SV=1 Q9ES94; Q9WUU7 Cathepsin X OS=Mus musculus OX=10090 GN=Ctsz PE=2 SV=1; Cathepsin Z OS=Mus musculus OX=10090 GN=Ctsz PE=1 SV=1 0 2 2 0.5833 0 1 1 1 620.33221 1239.65715 1239.65308 3.28 0.00204 0/0 0 0 28225076 HCD 30 MS2 28.26084 1344.5 73.477 69.7698 21018 21018 21015 QEplus033719.raw F4 1305.5 1297.8 1597.2 1102.5 1353 1411 243 2.52 1 FALSE 1.14E-05 4.05E-06 1.122 -250 102294 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETPANLAK [R].eTPANLAk.[IL] N-Term(TMT6plex); K8(TMT6plex) 8 Q3TG12 Phenylalanyl-tRNA synthetase beta subunit (Fragment) OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1 Q9CZU5; Q3TI98; Q3TMX6; Q3UYC2; Q8C644; Q3TG12; A0A087WPV4; Q9WUA2 Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanyl-tRNA synthetase beta subunit (Fragment) OS=Mus musculus OX=10090 GN=Farsb PE=2 SV=1; Phenylalanine--tRNA ligase beta subunit (Fragment) OS=Mus musculus OX=10090 GN=Farsb PE=1 SV=1; Phenylalanine--tRNA ligase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=1 SV=2 0 2 2 0.525 0 1 1 1 651.39551 1301.78374 1301.78292 0.63 0.00041 0/0 0 0 17884982 HCD 30 MS2 33.87844 1173.2 110 69.7723 21019 21019 21015 QEplus033719.raw F4 1295.7 949.6 1273.6 917 1217.9 1385.6 413 2.8 1 FALSE 0.0004091 0.007358 0.451 -250 102299 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIFDSRK [K].gIFDSRk.[N] N-Term(TMT6plex); K7(TMT6plex) 4 P47857 "ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=3" P47857-3; P47857; Q99K08; P47857-2 "Isoform 3 of ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm; ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=3; ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkm PE=2 SV=1; Isoform 2 of ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm" 1 3 3 0.2836 0 1 1 1 427.59625 1280.7742 1280.77269 1.18 0.0005 0/0 0 0 15517198 HCD 30 MS2 15.1606 907.6 81.643 69.7746 21020 21020 21015 QEplus033719.raw F4 1100.9 376.9 878.3 1253 523.9 1312.7 283 2.01 1 FALSE 0.006809 0.1081 -0.015 -250 102322 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKPAMPQGK [K].akPAMPQGk.[S] N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex) 2 Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TED3; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 0 3 3 0.5165 0 1 1 1 539.0047 1614.99955 1614.99684 1.67 0.0009 0/0 0 0 11715257 HCD 30 MS2 41.85383 1162.9 110 69.7845 21024 21024 21015 QEplus033719.raw F4 1040.6 1235.6 1309.9 932.4 1271.4 1187.4 314 3.93 1 FALSE 1.14E-05 0.0002138 0.794 -250 102329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VPEPCQPK [K].vPEPcQPk.[VA] N-Term(TMT6plex); C5(Carbamidomethyl); K8(TMT6plex) 1 Q62266 Cornifin-A OS=Mus musculus OX=10090 GN=Sprr1a PE=1 SV=1 Q62266 Cornifin-A OS=Mus musculus OX=10090 GN=Sprr1a PE=1 SV=1 0 2 2 0.5923 0 1 1 1 706.90259 1412.7979 1412.79719 0.5 0.00035 0/0 0 0 10595330 HCD 30 MS2 45.48599 500.6 110 69.7871 21025 21025 21015 QEplus033719.raw F4 500.9 561.3 548 409 558.9 425.8 327 2.33 1 FALSE 0.001506 0.0223 0.263 -250 102339 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HYQINQQWER [K].hYQINQQWER.[T] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; B9EHT6; A0A087WR50; Q3UGY5; Q4KL80; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.6749 0 1 1 1 544.28174 1630.83066 1630.82875 1.17 0.00064 0/0 0 0 33293920 HCD 30 MS2 40.26015 454.5 39.814 69.7944 21027 21027 21026 QEplus033719.raw F4 434.6 378.6 490.3 391.9 532.1 499.3 194 4.43 3 FALSE 1.14E-05 7.80E-07 1.258 -250 102350 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGTDIQDNK [K].vGTDIQDNk.[CS] N-Term(TMT6plex); K9(TMT6plex) 5 Q4FJN9 Fdps protein OS=Mus musculus OX=10090 GN=Fdps PE=1 SV=1 Q3TMB3; Q3US29; A0A0G2JE82; Q4FJN9; Q5M8R9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fdps PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fdps PE=2 SV=1; Farnesyl pyrophosphate synthase (Fragment) OS=Mus musculus OX=10090 GN=Fdps PE=1 SV=1; Fdps protein OS=Mus musculus OX=10090 GN=Fdps PE=1 SV=1; Farnesyl diphosphate synthetase OS=Mus musculus OX=10090 GN=Fdps PE=2 SV=1 0 2 2 0.638 0 1 1 1 724.41223 1447.81719 1447.81568 1.04 0.00075 0/0 0 0 67543192 HCD 30 MS2 4.761641 696.8 30.833 69.7991 21029 21029 21026 QEplus033719.raw F4 711 638.7 768.4 569 698.9 794.5 473 3.26 1 FALSE 1.14E-05 0.0007377 0.689 -250 102371 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYEEIVK [K].rYEEIVk.[E] N-Term(TMT6plex); K7(TMT6plex) 6 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 1 3 3 0.096 0 1 1 1 465.61893 1394.84223 1394.84077 1.04 0.00049 0/0 0 0 11494501 HCD 30 MS2 20.75811 894.9 110 69.8061 21032 21032 21026 QEplus033719.raw F4 926.5 723.3 1000.4 766.1 967.3 986.1 329 3.23 1 FALSE 0.001117 0.01472 0.336 -250 102378 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDYPQAMK [K].gDYPQAMk.[H] N-Term(TMT6plex); K8(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 2 2 0.6804 0 1 1 1 684.37341 1367.73955 1367.73934 0.15 0.0001 0/0 0 0 10576720 HCD 30 MS2 17.70848 1044.7 110 69.8086 21033 21033 21026 QEplus033719.raw F4 1140.9 857.7 1164.4 965.6 1054.4 1085.4 243 3.16 1 FALSE 0.0005076 0.007899 0.441 -250 102383 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELSEVGSVR [K].eLSEVGSVR.[T] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.4573 0 1 1 1 602.84229 1204.67729 1204.67348 3.16 0.00191 0/0 0 0 8810778 HCD 30 MS2 64.18607 1289 110 69.8111 21034 21034 21026 QEplus033719.raw F4 1365.2 1081.9 1369.8 1057.8 1427.2 1432.2 330 2.93 2 FALSE 1.14E-05 0.0003078 0.763 -250 102412 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERNVEDLSGGELQR [K].eRNVEDLSGGELQR.[F] N-Term(TMT6plex) 4 Q6NXX7 Abce1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1 Q6NXX7; Q3TJM9; Q3UHY8; Q3TIU8 Abce1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1 1 3 3 0.717 0 1 1 1 610.98907 1830.95267 1830.95072 1.07 0.00065 0/0 0 0 13555035 HCD 30 MS2 31.45227 761.2 110 69.8282 21040 21040 21037 QEplus033719.raw F4 723.7 650.2 800.8 603.2 882.6 906.6 322 6.75 1 FALSE 1.14E-05 1.03E-14 2.754 -250 102416 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKTEGNEQMK [R].lkTEGNEQMk.[L] N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex) 4 Q8BJU0 Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=2 Q8BJU0; A0A1W2P6P1; A0A1W2P7I5; Q8BJU0-2 Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=2; Small glutamine-rich tetratricopeptide repeat-containing protein alpha (Fragment) OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=1; Small glutamine-rich tetratricopeptide repeat-containing protein alpha (Fragment) OS=Mus musculus OX=10090 GN=Sgta PE=1 SV=1; Isoform 2 of Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Mus musculus OX=10090 GN=Sgta 1 3 3 0.3883 0 1 1 1 622.36578 1865.0828 1865.07694 3.14 0.00195 0/0 0 0 13588841 HCD 30 MS2 33.31448 1260.2 110 69.8308 21041 21041 21037 QEplus033719.raw F4 1239.2 1075.4 1437.2 1112.3 1219.9 1476.9 415 2.91 1 FALSE 1.14E-05 5.41E-08 1.478 -250 102432 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MPEDESTPEK [K].mPEDESTPEk.[R] N-Term(TMT6plex); K10(TMT6plex) 8 P62748 Hippocalcin-like protein 1 OS=Mus musculus OX=10090 GN=Hpcal1 PE=1 SV=2 D3Z2Z8; Q91X97; E9PV73; P84075; D3YVA2; A0A1Y7VMK3; P62748; A2A7R5 Neurocalcin-delta (Fragment) OS=Mus musculus OX=10090 GN=Ncald PE=1 SV=2; Neurocalcin-delta OS=Mus musculus OX=10090 GN=Ncald PE=1 SV=4; Neuron-specific calcium-binding protein hippocalcin (Fragment) OS=Mus musculus OX=10090 GN=Hpca PE=1 SV=1; Neuron-specific calcium-binding protein hippocalcin OS=Mus musculus OX=10090 GN=Hpca PE=1 SV=2; Neurocalcin-delta (Fragment) OS=Mus musculus OX=10090 GN=Ncald PE=1 SV=2; Hippocalcin-like protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hpcal1 PE=1 SV=1; Hippocalcin-like protein 1 OS=Mus musculus OX=10090 GN=Hpcal1 PE=1 SV=2; Neuron-specific calcium-binding protein hippocalcin (Fragment) OS=Mus musculus OX=10090 GN=Hpca PE=1 SV=1 0 2 2 0.5515 0 1 1 1 810.91644 1620.82561 1620.81911 4.01 0.00325 0/0 0 0 10341543 HCD 30 MS2 0 458.9 110 69.8358 21043 21043 21037 QEplus033719.raw F4 468 477.6 504.5 317.7 545.1 440.5 258 3.3 1 FALSE 1.14E-05 1.76E-05 1.001 -250 102437 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGVVQYSSDTR [R].vGVVQYSSDTR.[T] N-Term(TMT6plex) 4 Q60847 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3 Q60847; E9PX70; Q60847-5; Q60847-2 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3; Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1; Isoform 5 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 2 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 0 2 2 0.7741 0 1 1 1 720.38635 1439.76543 1439.76917 -2.6 -0.00187 0/0 0 0 7317470 HCD 30 MS2 13.91728 496.6 110 69.8383 21044 21044 21037 QEplus033719.raw F4 457.1 418.3 499.9 275.6 903.8 425.1 258 3.63 1 FALSE 1.14E-05 6.59E-09 1.652 -250 102444 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTSTMIGAGSK [R].nTSTMIGAGSk.[D] N-Term(TMT6plex); K11(TMT6plex) 5 G5E884 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Pak1 PE=1 SV=1 O88643; Q9R2B2; G5E884; A0A0U1RQ87; S4R2K7 Serine/threonine-protein kinase PAK 1 OS=Mus musculus OX=10090 GN=Pak1 PE=1 SV=1; Cdc42/Rac effector kinase (Fragment) OS=Mus musculus OX=10090 GN=Paka PE=4 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Pak1 PE=1 SV=1; Non-specific serine/threonine protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Pak1 PE=1 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Pak1 PE=1 SV=1 0 2 2 0.7 0 1 1 1 762.927 1524.84673 1524.8456 0.74 0.00056 0/0 0 0 4190264.25 HCD 30 MS2 0 429.9 110 69.8409 21045 21045 21037 QEplus033719.raw F4 441.9 417.9 431.7 284 629.3 374.6 376 4.9 1 FALSE 1.14E-05 6.84E-11 2.028 -250 102456 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MSACAMGSSTMGR [R].mSAcAMGSSTMGR.[R] N-Term(TMT6plex); C4(Carbamidomethyl) 1 Q61033 "Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4" Q61033 "Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4" 0 2 2 0.9113 0 1 1 1 788.35181 1575.69634 1575.6949 0.91 0.00072 0/0 0 0 3857152.5 HCD 30 MS2 0 249.4 110 69.8459 21047 21047 21037 QEplus033719.raw F4 208.4 256.3 278.1 190.3 303.6 260 8 4.85 1 FALSE 1.14E-05 1.07E-11 2.181 -250 102459 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEPPKEEPK [K].vEPPkEEPk.[H] N-Term(TMT6plex); K5(TMT6plex); K9(TMT6plex) 4 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 1 3 3 0.4449 0 1 1 1 580.68915 1740.05289 1740.05105 1.06 0.00061 0/0 0 0 67055232 HCD 30 MS2 21.6888 1090.8 30.256 69.8532 21049 21049 21048 QEplus033719.raw F4 1153.5 876.1 1196.1 960.1 1085.6 1273.6 278 2.36 1 FALSE 0.0001603 0.00385 0.531 -250 102467 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLVPEHEK [K].vLVPEHEk.[D] N-Term(TMT6plex); K8(TMT6plex) 3 Q3TCS0 Prolyl endopeptidase OS=Mus musculus OX=10090 GN=Prep PE=2 SV=1 Q3TCS0; Q8C6A3; Q9QUR6 Prolyl endopeptidase OS=Mus musculus OX=10090 GN=Prep PE=2 SV=1; Prolyl endopeptidase OS=Mus musculus OX=10090 GN=Prep PE=2 SV=1; Prolyl endopeptidase OS=Mus musculus OX=10090 GN=Prep PE=1 SV=1 0 3 3 0.6512 0 1 1 1 470.29068 1408.85749 1408.85642 0.76 0.00035 0/0 0 0 37619028 HCD 30 MS2 48.81818 839.7 26.88 69.8555 21050 21050 21048 QEplus033719.raw F4 834.2 641.2 886.9 876.1 821.3 978.4 258 3.44 1 FALSE 1.14E-05 6.27E-05 0.896 -250 102474 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HPALFK [R].hPALFk.[A] N-Term(TMT6plex); K6(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 0 3 3 0.4602 0 1 1 1 390.91846 1170.74082 1170.73994 0.75 0.00029 0/0 0 0 24511118 HCD 30 MS2 5.90347 513.4 61.458 69.8577 21051 21051 21048 QEplus033719.raw F4 577.4 402.2 571 439.5 474.2 616.1 156 2.89 1 FALSE 1.14E-05 0.0004232 0.736 -250 102481 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGSLGENQIK [K].gGSLGENQIk.[D] N-Term(TMT6plex); K10(TMT6plex) 7 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; Q3UGC3; E9Q0M9; S4R1T7; E9Q9F3; E9QA16; Q3TUS1 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1 0 2 2 0.419 0 1 1 1 730.92792 1460.84856 1460.84731 0.85 0.00062 0/0 0 0 15133984 HCD 30 MS2 9.733369 947.7 110 69.8602 21052 21052 21048 QEplus033719.raw F4 970.6 726.2 1016.4 661.1 1382.4 929.5 489 3.15 1 FALSE 1.14E-05 3.39E-06 1.137 -250 102497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MPDDDGGDRIK [K].mPDDDGGDRIk.[G] N-Term(TMT6plex); K11(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; Q8BUX4; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 1 3 3 0.7183 0 1 1 1 559.62543 1676.86173 1676.86779 -3.62 -0.00202 0/0 0 0 13697811 HCD 30 MS2 47.12681 1133.6 67.236 69.865 21054 21054 21048 QEplus033719.raw F4 1203.1 656.7 987 1440.1 1057.8 1456.7 254 3.55 2 FALSE 1.14E-05 0.0003712 0.747 -250 102505 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AINNYNPK [K].aINNYNPk.[D] N-Term(TMT6plex); K8(TMT6plex) 5 Q8BYK6 YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3 PE=1 SV=2 Q8BYK6-2; Q8BYK6-3; Q8BYK6; Q7TN20; Q8BVC6 Isoform 2 of YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3; Isoform 3 of YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3; YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3 PE=1 SV=2; Ythdf3 protein (Fragment) OS=Mus musculus OX=10090 GN=Ythdf3 PE=2 SV=1; YTH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ythdf3 PE=2 SV=1 0 3 3 0.1415 0 1 1 1 464.60754 1391.80808 1391.80472 2.41 0.00112 0/0 0 0 11842380 HCD 30 MS2 4.768322 970.5 110 69.8675 21055 21055 21048 QEplus033719.raw F4 883.5 944.3 1088 699.5 1180.4 1027.1 476 2.05 1 FALSE 0.0023 0.04554 0.156 -250 102514 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTAPCPPDVVR [K].gTAPcPPDVVR.[A] N-Term(TMT6plex); C5(Carbamidomethyl) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 2 2 0.6656 0 1 1 1 699.37384 1397.7404 1397.74085 -0.32 -0.00022 0/0 0 0 8635441 HCD 30 MS2 26.86023 525.4 110 69.87 21056 21056 21048 QEplus033719.raw F4 549.9 258.8 504.3 593.9 573 672.6 255 3.14 1 FALSE 1.14E-05 1.50E-06 1.204 -250 102522 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAIQNTEMK [K].tAIQNTEMk.[E] N-Term(TMT6plex); K9(TMT6plex) 7 E9Q6R7 Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 O08614; Q6P6L2; A0A1W2P8A5; A0A1W2P8G5; Q3UYS4; Q810I5; E9Q6R7 Cytoskeletal protein OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrn protein (Fragment) OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrophin (Fragment) OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1; Utrophin (Fragment) OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrn protein (Fragment) OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 0 2 2 0.6223 0 1 1 1 747.4267 1493.84612 1493.83979 4.24 0.00317 0/0 0 0 4797628 HCD 30 MS2 0 425.6 110 69.8725 21057 21057 21048 QEplus033719.raw F4 434.6 365 473.4 340.9 422.7 517.3 395 4.21 1 FALSE 1.14E-05 5.58E-07 1.285 -250 102529 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPTELTESQK [K].gPTELTESQk.[Y] N-Term(TMT6plex); K10(TMT6plex) 14 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A2AT64; F6RSJ3; A2AT67; A2AT68; A0A5K1VVQ9; Q812E1; Q8R4N3; A2AT70; E9Q8N1; A2AT66; F7CR78; A2AT65 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=8; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Connectin/titin N2A-PEVK (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=4 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.6199 0 1 1 1 774.43896 1547.87065 1547.86811 1.64 0.00127 0/0 0 0 4234642 HCD 30 MS2 30.7748 347 110 69.8751 21058 21058 21048 QEplus033719.raw F4 383.4 143 295.1 557 156.2 547.6 418 3.21 2 FALSE 1.14E-05 5.46E-06 1.097 -250 102542 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAQDDLVK [K].eAQDDLVk.[T] N-Term(TMT6plex); K8(TMT6plex) 5 Q4KML7 Ezrin OS=Mus musculus OX=10090 GN=Ezr PE=1 SV=1 Q8CBU4; Q3UXR4; Q4KML7; Q3TCP5; Q3UL48 FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; Ezrin OS=Mus musculus OX=10090 GN=Ezr PE=1 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1 0 2 2 0.4246 0 1 1 1 688.39545 1375.78362 1375.78332 0.22 0.00015 0/0 0 0 21485792 HCD 30 MS2 10.07731 1174.4 110 69.8849 21061 21061 21059 QEplus033719.raw F4 1128.4 1208.2 1369.2 1060.1 1119.8 1161 488 3.25 1 FALSE 1.14E-05 0.0002165 0.793 -250 102548 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVDQIRPDR [K].iVDQIRPDR.[Q] N-Term(TMT6plex) 11 Q5U222; Q501J6 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1;Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1 Q3UXW3; Q5U222; Q3TU25; Q3V0Z8; Q501J6; Q3U741; A1L333; Q501J6-2; S4R1I6; Q61656; Q8BTS0 RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Isoform 2 of Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 0 3 3 0.5152 0 1 1 1 447.59988 1340.7851 1340.78476 0.25 0.00011 0/0 0 0 51284032 HCD 30 MS2 57.76194 545.8 15.197 69.8872 21062 21062 21059 QEplus033719.raw F4 487.1 498.4 634.3 432 613.1 610.1 302 2.97 2 FALSE 0.001108 0.01438 0.34 -250 102565 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous INISEGNCPER [R].iNISEGNcPER.[I] N-Term(TMT6plex); C8(Carbamidomethyl) 25 Q61990; P60335; P57722 Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1;Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1;Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3 A0A2R8VHY9; Q61990; Q61990-3; A0A2R8VI71; A0A2R8VHI3; A0A2R8VI25; Q3TF69; B2M1R7; A0A2R8VHN3; Q61990-2; A0A2R8W6L5; Q8CFQ6; P60335; Q3TT81; P57722; A0A2R8VI12; A0A2R8VHG2; A0A2R8VKN0; A0A2R8VHP9; P57722-2; A0A2R8VKF0; A0A2R8VI73; E9Q7D8; A0A2R8VHZ0; A0A2R8VJY1 Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 3 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pcbp2 PE=2 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Pcbp3 protein OS=Mus musculus OX=10090 GN=Pcbp3 PE=2 SV=1; Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1 0 3 3 0.7813 0 1 1 1 506.59161 1517.76029 1517.75796 1.54 0.00078 0/0 0 0 34680128 HCD 30 MS2 61.12061 1062.2 62.828 69.8917 21064 21064 21059 QEplus033719.raw F4 1152.2 854.4 1105.5 937.9 1291.3 1032.1 133 4.07 3 FALSE 1.14E-05 9.24E-06 1.054 -250 102583 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MPEDESTPEK [K].mPEDESTPEk.[R] N-Term(TMT6plex); K10(TMT6plex) 8 P62748 Hippocalcin-like protein 1 OS=Mus musculus OX=10090 GN=Hpcal1 PE=1 SV=2 D3Z2Z8; Q91X97; E9PV73; P84075; D3YVA2; A0A1Y7VMK3; P62748; A2A7R5 Neurocalcin-delta (Fragment) OS=Mus musculus OX=10090 GN=Ncald PE=1 SV=2; Neurocalcin-delta OS=Mus musculus OX=10090 GN=Ncald PE=1 SV=4; Neuron-specific calcium-binding protein hippocalcin (Fragment) OS=Mus musculus OX=10090 GN=Hpca PE=1 SV=1; Neuron-specific calcium-binding protein hippocalcin OS=Mus musculus OX=10090 GN=Hpca PE=1 SV=2; Neurocalcin-delta (Fragment) OS=Mus musculus OX=10090 GN=Ncald PE=1 SV=2; Hippocalcin-like protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hpcal1 PE=1 SV=1; Hippocalcin-like protein 1 OS=Mus musculus OX=10090 GN=Hpcal1 PE=1 SV=2; Neuron-specific calcium-binding protein hippocalcin (Fragment) OS=Mus musculus OX=10090 GN=Hpca PE=1 SV=1 0 3 3 0.5241 0 1 1 1 540.94519 1620.82102 1620.81911 1.18 0.00064 0/0 0 0 13935037 HCD 30 MS2 58.36357 1078.2 76.806 69.8984 21067 21067 21059 QEplus033719.raw F4 1062.1 934.1 1173.9 914.6 1206 1178.4 230 3.11 1 FALSE 0.001778 0.0304 0.214 -250 102589 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSEEVAETFR [R].gSEEVAETFR.[A] N-Term(TMT6plex) 6 Q3TKJ1 Branched-chain-amino-acid aminotransferase OS=Mus musculus OX=10090 GN=Bcat1 PE=2 SV=1 Q3TKJ1; E9Q4K3; Q8CBC8; Q9CXX6; B2KFA8; Q3TJN1 "Branched-chain-amino-acid aminotransferase OS=Mus musculus OX=10090 GN=Bcat1 PE=2 SV=1; Branched-chain-amino-acid aminotransferase OS=Mus musculus OX=10090 GN=Bcat1 PE=1 SV=1; Branched-chain-amino-acid aminotransferase OS=Mus musculus OX=10090 GN=Bcat1 PE=1 SV=1; Branched-chain-amino-acid aminotransferase OS=Mus musculus OX=10090 GN=Bcat1 PE=2 SV=1; Branched-chain-amino-acid aminotransferase, cytosolic (Fragment) OS=Mus musculus OX=10090 GN=Bcat1 PE=1 SV=8; Branched-chain-amino-acid aminotransferase OS=Mus musculus OX=10090 GN=Bcat1 PE=1 SV=1" 0 2 2 0.6696 0 1 1 1 677.34552 1353.68376 1353.68478 -0.75 -0.00051 0/0 0 0 9631771 HCD 30 MS2 7.825165 863.8 110 69.901 21068 21068 21059 QEplus033719.raw F4 882.8 788.9 852.9 610.9 1242.3 804.8 156 3.42 1 FALSE 1.14E-05 9.25E-06 1.054 -250 102598 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYSFTTTAER [-R].gYSFTTTAER.[E] N-Term(TMT6plex) 22 O89054; Q3UAF6 Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q6IWE2; Q3UCF8; Q3TSB7; Q9QZ83; O89054; Q3UAF6; Q3UD81; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; G3UZ07; Q3TIJ9; Q61276; Q3UBP6; E9Q5F4; Q3UBQ4; P63260; Q3U939; Q3UGS0; Q3U804 "Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 0 2 2 0.7257 0 1 1 1 681.349 1361.69072 1361.68986 0.63 0.00043 0/0 0 0 377847584 HCD 30 MS2 6.864652 546.6 4.925 69.9108 21071 21071 21070 QEplus033719.raw F4 456.4 584.7 649.2 380.9 742.3 465.9 142 4.52 2 FALSE 1.14E-05 2.07E-06 1.177 -250 102606 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous INISEGNCPER [R].iNISEGNcPER.[I] N-Term(TMT6plex); C8(Carbamidomethyl) 25 Q61990; P60335; P57722 Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1;Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1;Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3 A0A2R8VHY9; Q61990; Q61990-3; A0A2R8VI71; A0A2R8VHI3; A0A2R8VI25; Q3TF69; B2M1R7; A0A2R8VHN3; Q61990-2; A0A2R8W6L5; Q8CFQ6; P60335; Q3TT81; P57722; A0A2R8VI12; A0A2R8VHG2; A0A2R8VKN0; A0A2R8VHP9; P57722-2; A0A2R8VKF0; A0A2R8VI73; E9Q7D8; A0A2R8VHZ0; A0A2R8VJY1 Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 3 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pcbp2 PE=2 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Pcbp3 protein OS=Mus musculus OX=10090 GN=Pcbp3 PE=2 SV=1; Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1 0 2 2 0.7861 0 1 1 1 759.38318 1517.75908 1517.75796 0.74 0.00056 0/0 0 0 91854328 HCD 30 MS2 1.733797 414.4 21.177 69.9131 21072 21072 21070 QEplus033719.raw F4 387.9 382.4 478.8 331.7 463.5 442 132 4.16 3 FALSE 1.14E-05 1.07E-07 1.422 -250 102612 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVPTPAK [K].aAVPTPAk.[K] N-Term(TMT6plex); K8(TMT6plex) 8 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; A0A087WRM5; Q8CE30; Q9CT46 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 2 2 0.6678 0 1 1 1 606.88989 1212.77251 1212.77163 0.72 0.00044 0/0 0 0 91990024 HCD 30 MS2 10.61525 873.1 21.917 69.9154 21073 21073 21070 QEplus033719.raw F4 802.2 860.5 975.9 535.4 1169.1 895.2 149 2.83 1 FALSE 0.0003496 0.006767 0.463 -250 102617 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQKPVVVK [R].sQkPVVVk.[R] N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex) 3 Q5M9N5 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1 Q5M9N5; F6Z0X0; Q5M9J8 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1; 60S ribosomal protein L28 (Fragment) OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1; 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1 0 3 3 0.4982 0 1 1 1 524.68677 1572.04575 1572.04517 0.37 0.00019 0/0 0 0 53864648 HCD 30 MS2 24.69827 1499 36.532 69.9177 21074 21074 21070 QEplus033719.raw F4 1614.9 1229.6 1539.5 1257.8 1818.4 1533.7 98 2.75 1 FALSE 5.44E-05 0.00233 0.584 -250 102623 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAQEEYIK [K].aAQEEYIk.[R] N-Term(TMT6plex); K8(TMT6plex) 5 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 Q9CPQ9; A6ZI46; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 0 2 2 0.5094 0 1 1 1 705.40607 1409.80486 1409.80405 0.57 0.0004 0/0 0 0 46908528 HCD 30 MS2 10.62222 1243.5 40.645 69.9199 21075 21075 21070 QEplus033719.raw F4 1358.2 785.7 1314.5 1498.9 895 1608.4 383 3.71 1 FALSE 1.14E-05 0.0001449 0.826 -250 102636 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGIGPTYSSK [K].kGIGPTYSSk.[A] N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex) 3 P28650 Adenylosuccinate synthetase isozyme 1 OS=Mus musculus OX=10090 GN=Adss1 PE=1 SV=2 P28650-2; P28650; J3QN31 Isoform 2 of Adenylosuccinate synthetase isozyme 1 OS=Mus musculus OX=10090 GN=Adss1; Adenylosuccinate synthetase isozyme 1 OS=Mus musculus OX=10090 GN=Adss1 PE=1 SV=2; Adenylosuccinate synthetase isozyme 1 OS=Mus musculus OX=10090 GN=Adssl1 PE=1 SV=1 1 3 3 0.6523 0 1 1 1 575.68921 1725.05307 1725.05138 0.98 0.00056 0/0 0 0 9485114 HCD 30 MS2 24.08981 1004.1 110 69.9247 21077 21077 21070 QEplus033719.raw F4 1145.4 608.8 901.6 1450 763.4 1155.4 233 3.48 1 FALSE 1.14E-05 2.53E-08 1.541 -250 102640 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AINNYNPK [K].aINNYNPk.[D] N-Term(TMT6plex); K8(TMT6plex) 5 Q8BYK6 YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3 PE=1 SV=2 Q8BYK6-2; Q8BYK6-3; Q8BYK6; Q7TN20; Q8BVC6 Isoform 2 of YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3; Isoform 3 of YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3; YTH domain-containing family protein 3 OS=Mus musculus OX=10090 GN=Ythdf3 PE=1 SV=2; Ythdf3 protein (Fragment) OS=Mus musculus OX=10090 GN=Ythdf3 PE=2 SV=1; YTH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ythdf3 PE=2 SV=1 0 2 2 0.5279 0 1 1 1 696.40594 1391.80461 1391.80472 -0.08 -0.00005 0/0 0 0 5985583 HCD 30 MS2 0 525.4 110 69.9272 21078 21078 21070 QEplus033719.raw F4 527.5 412 608 467.6 500.8 636.8 469 2.69 1 FALSE 0.0007436 0.01056 0.395 -250 102646 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLSQSALPYRR [K].gLSQSALPYRR.[S] N-Term(TMT6plex) 3 Q5BLJ7 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1 A0A0U1RQ71; Q921R2; Q5BLJ7 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1; 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1; 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1 1 2 2 0.4554 0 1 1 1 738.92792 1476.84856 1476.84843 0.09 0.00007 0/0 0 0 3989353.75 HCD 30 MS2 0 242 110 69.9297 21079 21079 21070 QEplus033719.raw F4 215.8 222.8 259 224.8 273.7 255.6 521 3.03 1 FALSE 1.14E-05 6.57E-06 1.082 -250 102661 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGVHGGLINKK [K].eGVHGGLINkk.[C] N-Term(TMT6plex); K10(TMT6plex); K11(TMT6plex) 3 Q5SX50 Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=1 SV=1 Q3U7V7; Q8CEH8; Q5SX50 Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=2 SV=1; Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=2 SV=1; Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=1 SV=1 1 4 4 0.5707 0 1 1 1 460.54126 1839.14321 1839.14193 0.7 0.00032 0/0 0 0 897879552 HCD 30 MS2 6.746694 695.5 1.891 69.9393 21082 21082 21081 QEplus033719.raw F4 683.6 663.6 796.8 528 815.3 686 193 4.03 1 FALSE 1.14E-05 3.88E-09 1.695 -250 102668 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CKQDVLK [K].ckQDVLk.[T] N-Term(TMT6plex); C1(Carbamidomethyl); K2(TMT6plex); K7(TMT6plex) 2 Q9WVE8 Protein kinase C and casein kinase substrate in neurons protein 2 OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1 A0A2R8W6S4; Q9WVE8 Protein kinase C and casein kinase substrate in neurons protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1; Protein kinase C and casein kinase substrate in neurons protein 2 OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1 1 3 3 0.0968 0 1 1 1 526.65991 1577.96518 1577.96521 -0.02 -0.00001 0/0 0 0 16809542 HCD 30 MS2 31.92476 1558.1 110 69.9418 21083 21083 21081 QEplus033719.raw F4 1605.7 1299.8 1723.2 1582.4 1546.6 1591.1 344 2.17 1 FALSE 0.001514 0.02294 0.258 -250 102675 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLSQSALPYRR [K].gLSQSALPYRR.[S] N-Term(TMT6plex) 3 Q5BLJ7 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1 A0A0U1RQ71; Q921R2; Q5BLJ7 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1; 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1; 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1 1 3 3 0.5718 0 1 1 1 492.95447 1476.84885 1476.84843 0.29 0.00014 0/0 0 0 104835928 HCD 30 MS2 9.611213 485 18.565 69.944 21084 21084 21081 QEplus033719.raw F4 474.9 457.1 554.9 380.9 571.9 470.5 520 4.39 1 FALSE 1.14E-05 1.48E-09 1.775 -250 102685 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAEDETEAGVK [K].vAEDETEAGVk.[F] N-Term(TMT6plex); K11(TMT6plex) 7 Q3TN39 Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1 Q3TN39; A0A0U1RPG5; P10852; A0A0U1RP32; P10852-2; A0A0U1RP98; Q8BTJ9 Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; 4F2 cell-surface antigen heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; 4F2 cell-surface antigen heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; Isoform 2 of 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2; 4F2 cell-surface antigen heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1 0 2 2 0.7778 0 1 1 1 803.4389 1605.87053 1605.87359 -1.9 -0.00153 0/0 0 0 13575177 HCD 30 MS2 22.69203 689 110 69.9491 21086 21086 21081 QEplus033719.raw F4 741.9 594.2 758.3 572.1 782.3 684.9 385 4.68 1 FALSE 1.14E-05 2.28E-10 1.929 -250 102689 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMTLADPENR [R].nMTLADPENR.[Q] N-Term(TMT6plex) 1 Q99L88 Beta-1-syntrophin OS=Mus musculus OX=10090 GN=Sntb1 PE=1 SV=4 Q99L88 Beta-1-syntrophin OS=Mus musculus OX=10090 GN=Sntb1 PE=1 SV=4 0 2 2 0.6601 0 1 1 1 695.35419 1389.7011 1389.69938 1.24 0.00086 0/0 0 0 7254305 HCD 30 MS2 14.56549 414.9 110 69.9516 21087 21087 21081 QEplus033719.raw F4 420.5 254.4 445.1 450.7 373 545.4 155 3.06 1 FALSE 1.14E-05 2.49E-05 0.972 -250 102694 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESMQMQVEAER [K].eSMQMQVEAER.[R] N-Term(TMT6plex) 4 Q99JB2 "Stomatin-like protein 2, mitochondrial OS=Mus musculus OX=10090 GN=Stoml2 PE=1 SV=1" F6WI02; Q99JB2; A2AG41; A2AG39 "Stomatin-like protein 2, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Stoml2 PE=1 SV=1; Stomatin-like protein 2, mitochondrial OS=Mus musculus OX=10090 GN=Stoml2 PE=1 SV=1; Stomatin-like protein 2, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Stoml2 PE=1 SV=10; Stomatin-like protein 2, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Stoml2 PE=1 SV=1" 0 2 2 0.6581 0 1 1 1 783.87616 1566.74504 1566.74534 -0.19 -0.00015 0/0 0 0 6074136.5 HCD 30 MS2 0 335.8 110 69.9541 21088 21088 21081 QEplus033719.raw F4 324.9 285.4 406.4 342.9 267.8 387.7 67 4.3 1 FALSE 1.14E-05 1.96E-09 1.751 -250 102698 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YGISDECK [K].yGISDEck.[S] N-Term(TMT6plex); C7(Carbamidomethyl); K8(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.7363 0 1 1 1 715.37219 1429.73711 1429.73974 -1.84 -0.00131 0/0 0 0 5708839 HCD 30 MS2 0 666.7 110 69.9566 21089 21089 21081 QEplus033719.raw F4 743.2 250.2 579.4 1192.6 246.5 988 186 3.11 2 FALSE 1.14E-05 0.0005183 0.719 -250 102704 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMMSPMAER [R].sMMSPMAER.[S] N-Term(TMT6plex) 7 H9KV00 Protein SON OS=Mus musculus OX=10090 GN=Son PE=1 SV=1 Q9QX47-3; Q9QX47-4; H9KV15; Q9QX47; H9KV01; Q9QX47-2; H9KV00 Isoform 3 of Protein SON OS=Mus musculus OX=10090 GN=Son; Isoform 4 of Protein SON OS=Mus musculus OX=10090 GN=Son; Protein SON OS=Mus musculus OX=10090 GN=Son PE=1 SV=1; Protein SON OS=Mus musculus OX=10090 GN=Son PE=1 SV=2; Protein SON OS=Mus musculus OX=10090 GN=Son PE=1 SV=1; Isoform 2 of Protein SON OS=Mus musculus OX=10090 GN=Son; Protein SON OS=Mus musculus OX=10090 GN=Son PE=1 SV=1 0 2 2 0.5412 0 1 1 1 634.80334 1268.59941 1268.59987 -0.36 -0.00023 0/0 0 0 5147342.5 HCD 30 MS2 0 656.8 110 69.9592 21090 21090 21081 QEplus033719.raw F4 639.6 515.4 725.5 605.7 684.1 770.3 71 2.55 1 FALSE 5.44E-05 0.002206 0.589 -250 102714 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVQEQKPK [K].lVQEQkPk.[G] N-Term(TMT6plex); K6(TMT6plex); K8(TMT6plex) 3 F8WHU5 Sister chromatid cohesion protein PDS5 homolog B OS=Mus musculus OX=10090 GN=Pds5b PE=1 SV=1 F8WHU5; Q4VA53-3; Q4VA53 Sister chromatid cohesion protein PDS5 homolog B OS=Mus musculus OX=10090 GN=Pds5b PE=1 SV=1; Isoform 3 of Sister chromatid cohesion protein PDS5 homolog B OS=Mus musculus OX=10090 GN=Pds5b; Sister chromatid cohesion protein PDS5 homolog B OS=Mus musculus OX=10090 GN=Pds5b PE=1 SV=1 0 3 3 0.4518 0 1 1 1 553.02576 1657.06272 1657.06155 0.7 0.00039 0/0 0 0 9000492 HCD 30 MS2 48.63359 1441.1 72.512 69.9687 21093 21093 21092 QEplus033719.raw F4 1452.5 1301.7 1445.6 1143.2 1928.6 1375.1 163 1.97 1 FALSE 5.44E-05 0.002494 0.577 -250 102724 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVQTNDLK [R].eVQTNDLk.[E] N-Term(TMT6plex); K8(TMT6plex) 5 P97351 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3 Q3UJU5; P97351; Q3U5P8; Q3UAC2; Q9D1S3 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1 0 2 2 0.1865 0 1 1 1 702.90924 1404.8112 1404.80987 0.95 0.00067 0/0 0 0 35358048 HCD 30 MS2 4.129521 1097.6 63.602 69.971 21094 21094 21092 QEplus033719.raw F4 1251.4 916.4 1141.7 1076.3 965.9 1234 486 3.11 1 FALSE 1.14E-05 0.0004071 0.74 -250 102730 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVSDQFYR [R].sVSDQFYR.[Y] N-Term(TMT6plex) 12 Q3TQR3 Eukaryotic translation initiation factor 5 OS=Mus musculus OX=10090 GN=Eif5 PE=1 SV=1 Q6PHA6; A0A1Y7VNP4; Q05C65; A0A1Y7VLL6; Q05CM5; A0A1Y7VLK2; A0A1Y7VJG2; Q3TT65; Q8BVV6; A0A1Y7VLQ0; Q05CY6; Q3TQR3 Eif5 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif5 PE=2 SV=1; Eukaryotic translation initiation factor 5 (Fragment) OS=Mus musculus OX=10090 GN=Eif5 PE=1 SV=1; Eif5 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif5 PE=2 SV=1; Eukaryotic translation initiation factor 5 (Fragment) OS=Mus musculus OX=10090 GN=Eif5 PE=1 SV=1; Eif5 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif5 PE=2 SV=1; Eukaryotic translation initiation factor 5 OS=Mus musculus OX=10090 GN=Eif5 PE=1 SV=1; Eukaryotic translation initiation factor 5 (Fragment) OS=Mus musculus OX=10090 GN=Eif5 PE=1 SV=1; eIF2B_5 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif5 PE=2 SV=1; Eukaryotic translation initiation factor 5 OS=Mus musculus OX=10090 GN=Eif5 PE=1 SV=1; Eukaryotic translation initiation factor 5 OS=Mus musculus OX=10090 GN=Eif5 PE=1 SV=1; Eif5 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif5 PE=2 SV=1; Eukaryotic translation initiation factor 5 OS=Mus musculus OX=10090 GN=Eif5 PE=1 SV=1 0 2 2 0.72 0 1 1 1 615.82013 1230.63298 1230.63162 1.11 0.00068 0/0 0 0 20781866 HCD 30 MS2 22.38383 1207.3 92.094 69.9733 21095 21095 21092 QEplus033719.raw F4 1195 1028.3 1390.7 1015.8 1322.6 1291.5 117 2.75 1 FALSE 1.14E-05 0.0007102 0.692 -250 102737 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAEDETEAGVK [K].vAEDETEAGVk.[F] N-Term(TMT6plex); K11(TMT6plex) 7 Q3TN39 Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1 Q3TN39; A0A0U1RPG5; P10852; A0A0U1RP32; P10852-2; A0A0U1RP98; Q8BTJ9 Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1; 4F2 cell-surface antigen heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; 4F2 cell-surface antigen heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; Isoform 2 of 4F2 cell-surface antigen heavy chain OS=Mus musculus OX=10090 GN=Slc3a2; 4F2 cell-surface antigen heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Slc3a2 PE=1 SV=1; Aamy domain-containing protein OS=Mus musculus OX=10090 GN=Slc3a2 PE=2 SV=1 0 3 3 0.7306 0 1 1 1 535.96259 1605.8732 1605.87359 -0.24 -0.00013 0/0 0 0 16390707 HCD 30 MS2 6.830021 927.7 71.449 69.9755 21096 21096 21092 QEplus033719.raw F4 1001 773.2 968.9 790.3 1124.2 908.6 371 4.38 1 FALSE 1.14E-05 1.29E-05 1.027 -250 102750 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDYPQAMK [K].gDYPQAMk.[H] N-Term(TMT6plex); K8(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 3 3 0.6301 0 1 1 1 456.58569 1367.74253 1367.73934 2.33 0.00106 0/0 0 0 16041706 HCD 30 MS2 37.13721 722.5 56.801 69.98 21098 21098 21092 QEplus033719.raw F4 754 607.6 796.9 576.3 822.8 777.2 260 2.46 1 FALSE 0.001702 0.02803 0.227 -250 102764 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVEVGPR [K].iVEVGPR.[D] N-Term(TMT6plex) 7 P38060 "Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Mus musculus OX=10090 GN=Hmgcl PE=1 SV=2" V9GWZ9; Q3TPS7; Q8JZS7; D3YVU9; P38060; V9GXD2; Q3UMP2 "Hydroxymethylglutaryl-CoA lyase OS=Mus musculus OX=10090 GN=Hmgcll1 PE=3 SV=1; Hydroxymethylglutaryl-CoA lyase OS=Mus musculus OX=10090 GN=Hmgcll1 PE=2 SV=1; 3-hydroxy-3-methylglutaryl-CoA lyase, cytoplasmic OS=Mus musculus OX=10090 GN=Hmgcll1 PE=2 SV=1; Hydroxymethylglutaryl-CoA lyase OS=Mus musculus OX=10090 GN=Hmgcll1 PE=1 SV=2; Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Mus musculus OX=10090 GN=Hmgcl PE=1 SV=2; Hydroxymethylglutaryl-CoA lyase OS=Mus musculus OX=10090 GN=Hmgcll1 PE=3 SV=1; 3-hydroxy-3-methylglutarate-CoA lyase OS=Mus musculus OX=10090 GN=Hmgcl PE=2 SV=1" 0 2 2 0.2294 0 1 1 1 499.81403 998.62078 998.6196 1.18 0.00059 0/0 0 0 5787657.5 HCD 30 MS2 55.53387 1024.3 110 69.985 21100 21100 21092 QEplus033719.raw F4 1001.8 831.3 1240.3 925.1 950.9 1196.4 54 2.31 1 FALSE 0.001117 0.01477 0.335 -250 102773 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQSPVLEPVGR [R].nQSPVLEPVGR.[S] N-Term(TMT6plex) 3 A7E215 Non-specific serine/threonine protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Rps6ka3 PE=2 SV=1 A7E215; B1AXN9; P18654 Non-specific serine/threonine protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Rps6ka3 PE=2 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Rps6ka3 PE=1 SV=1; Ribosomal protein S6 kinase alpha-3 OS=Mus musculus OX=10090 GN=Rps6ka3 PE=1 SV=2 0 2 2 0.7237 0 1 1 1 712.9071 1424.80693 1424.80589 0.73 0.00052 0/0 0 0 5208756 HCD 30 MS2 0 399.5 110 69.9876 21101 21101 21092 QEplus033719.raw F4 393.1 379.9 437.1 318.2 460.3 408.3 354 3.33 1 FALSE 1.14E-05 4.37E-06 1.116 -250 102782 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQKPVVVK [R].sQkPVVVk.[R] N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex) 3 Q5M9N5 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1 Q5M9N5; F6Z0X0; Q5M9J8 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1; 60S ribosomal protein L28 (Fragment) OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1; 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1 0 2 2 0.4615 0 1 1 1 786.52795 1572.04863 1572.04517 2.2 0.00173 0/0 0 0 4562026.5 HCD 30 MS2 35.38004 593.4 110 69.9901 21102 21102 21092 QEplus033719.raw F4 581.4 485.7 609.3 485 781.9 616.8 88 2.47 1 FALSE 0.0002019 0.004109 0.524 -250 102801 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAAVCVAK [K].tAAVcVAk.[L] N-Term(TMT6plex); C5(Carbamidomethyl); K8(TMT6plex) 11 Q5SWR1; Q5SVG5 AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=2 SV=1;AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=1 Q8CC13; Q5SWR1; Q5SVG5; O35643; H3BIY9; Q5SVG4; H3BKM0; Q9DBG3; Q3TVN4; Q3U1K9; H3BJ06 AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=2 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=2 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=1; AP-1 complex subunit beta-1 OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=2; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1; AP-2 complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=2 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=2 SV=1; AP-2 complex subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1 0 2 2 0.4924 0 1 1 1 639.38806 1277.76885 1277.76516 2.88 0.00184 0/0 0 0 58701084 HCD 30 MS2 18.56344 1151.9 23.91 70.0022 21106 21106 21103 QEplus033719.raw F4 1126.3 965.6 1236.2 997.2 1329.6 1256.3 357 3.94 2 FALSE 1.14E-05 7.32E-05 0.883 -250 102811 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YSEALK [K].ySEALk.[DK] N-Term(TMT6plex); K6(TMT6plex) 17 E9Q5J9; A0A0R4J1P2; E9Q450 Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 Q8BSH3; Q2VPA6-3; E9Q452; F8WID5; S4R2U0; F7DCU7; Q2VPA6; Q2VPA6-2; E9Q454; E9Q5J9; A0A0R4J1P2; P21107; E9Q450; Q8K0Z5; Q564G1; Q8BP43; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Isoform 3 of Helicase POLQ-like OS=Mus musculus OX=10090 GN=Helq; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Helicase POLQ-like (Fragment) OS=Mus musculus OX=10090 GN=Helq PE=1 SV=1; Helicase POLQ-like OS=Mus musculus OX=10090 GN=Helq PE=1 SV=2; Isoform 2 of Helicase POLQ-like OS=Mus musculus OX=10090 GN=Helq; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=3; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 3, gamma OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 0 2 2 0.2403 0 1 1 1 584.85278 1168.69829 1168.6978 0.42 0.00025 0/0 0 0 54128816 HCD 30 MS2 34.16441 1038.6 17.007 70.0044 21107 21107 21103 QEplus033719.raw F4 1133 823.5 1129.7 909.8 1075.2 1160.7 213 2.33 3 FALSE 0.005414 0.0924 0.028 -250 102820 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YIQAACK [K].yIQAAck.[T] N-Term(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex) 4 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 Q80U89; Q68FD5; Q5SXR6; Q3UPJ3 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1 0 2 2 0.4727 0 1 1 1 656.37885 1311.75041 1311.74951 0.69 0.00045 0/0 0 0 37963072 HCD 30 MS2 11.85043 1283.3 48.401 70.0067 21108 21108 21103 QEplus033719.raw F4 1301.7 1268.9 1469.4 1028.2 1448.9 1182.8 303 2.56 1 FALSE 0.0007816 0.01086 0.391 -250 102826 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGNGTVMGAEIR [K].eGNGTVMGAEIR.[H] N-Term(TMT6plex) 5 A0A1W2P6F6 Myosin light polypeptide 6 OS=Mus musculus OX=10090 GN=Myl6 PE=1 SV=1 A0A1W2P6G5; A0A1W2P6F6; A0A1W2P7Q9; Q60605; Q60605-2 Myosin light polypeptide 6 OS=Mus musculus OX=10090 GN=Myl6 PE=1 SV=1; Myosin light polypeptide 6 OS=Mus musculus OX=10090 GN=Myl6 PE=1 SV=1; Myosin light polypeptide 6 OS=Mus musculus OX=10090 GN=Myl6 PE=1 SV=1; Myosin light polypeptide 6 OS=Mus musculus OX=10090 GN=Myl6 PE=1 SV=3; Isoform Smooth muscle of Myosin light polypeptide 6 OS=Mus musculus OX=10090 GN=Myl6 0 2 2 0.6085 0 1 1 1 731.87891 1462.75054 1462.75214 -1.1 -0.0008 0/0 0 0 21986400 HCD 30 MS2 23.93073 729.6 79.868 70.009 21109 21109 21103 QEplus033719.raw F4 762.6 721.3 776.2 510.5 931 675.9 199 4.7 1 FALSE 1.14E-05 1.72E-10 1.952 -250 102827 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGNGTVMGAELR [K].eGNGTVMGAELR.[H] N-Term(TMT6plex) 9 Q545T7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Myl1 PE=2 SV=1 A0A0G2JDM3; Q61935; Q6PCW9; Q545G5; P09542; Q545T7; A0A087WRZ7; E9PWG4; A0A0G2JDW2 "Myosin light chain 3 OS=Mus musculus OX=10090 GN=Myl3 PE=1 SV=1; Ventricular alkali myosin light chain (Fragment) OS=Mus musculus OX=10090 GN=Myl3 PE=2 SV=1; Myl1 protein OS=Mus musculus OX=10090 GN=Myl1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myl1 PE=2 SV=1; Myosin light chain 3 OS=Mus musculus OX=10090 GN=Myl3 PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myl1 PE=2 SV=1; Myosin light chain 1/3, skeletal muscle isoform OS=Mus musculus OX=10090 GN=Myl1 PE=1 SV=1; Myosin light chain 1/3, skeletal muscle isoform OS=Mus musculus OX=10090 GN=Myl1 PE=1 SV=1; Myosin light chain 3 (Fragment) OS=Mus musculus OX=10090 GN=Myl3 PE=1 SV=1" 0 2 2 0.6085 0 1 2 2 731.87891 1462.75054 1462.75214 -1.1 -0.0008 0/0 0 0 21986400 HCD 30 MS2 23.93073 729.6 79.868 70.009 21109 21109 21103 QEplus033719.raw F4 762.6 721.3 776.2 510.5 931 675.9 199 4.7 2 FALSE 1.14E-05 1.72E-10 1.952 -250 102833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EALEEAEK [K].eALEEAEk.[A] N-Term(TMT6plex); K8(TMT6plex) 7 B9EKB0 Laminin B1 subunit 1 OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1 B9EKB0; Q9CRX6; Q3UR38; E9QN70; P02469; Q3UHL7; Q8K271 Laminin B1 subunit 1 OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1; Laminin subunit beta-1 OS=Mus musculus OX=10090 GN=Lamb1 PE=1 SV=1; Laminin subunit beta-1 OS=Mus musculus OX=10090 GN=Lamb1 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=1; Lamb1-1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lamb1 PE=2 SV=2 0 2 2 0.5569 0 1 1 1 688.88885 1376.77043 1376.76733 2.25 0.00155 0/0 0 0 13151633 HCD 30 MS2 28.56225 1035.4 110 70.0115 21110 21110 21103 QEplus033719.raw F4 985.6 1060.6 1241.2 831.3 1067.8 1025.7 441 3.43 1 FALSE 1.14E-05 0.000154 0.821 -250 102837 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAAVCVAK [K].tAAVcVAk.[L] N-Term(TMT6plex); C5(Carbamidomethyl); K8(TMT6plex) 11 Q5SWR1; Q5SVG5 AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=2 SV=1;AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=1 Q8CC13; Q5SWR1; Q5SVG5; O35643; H3BIY9; Q5SVG4; H3BKM0; Q9DBG3; Q3TVN4; Q3U1K9; H3BJ06 AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=2 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=2 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=1; AP-1 complex subunit beta-1 OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=2; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1; AP-2 complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=2 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=2 SV=1; AP-2 complex subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1 0 3 3 0.4585 0 1 1 1 426.59366 1277.76642 1277.76516 0.98 0.00042 0/0 0 0 13066282 HCD 30 MS2 39.58427 704.3 110 70.014 21111 21111 21103 QEplus033719.raw F4 730.6 602.5 751.3 607 754.9 779.4 383 2.77 2 FALSE 0.001028 0.0134 0.353 -250 102847 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSGALSVDK [R].sSGALSVDk.[K] N-Term(TMT6plex); K9(TMT6plex) 10 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; A0A0G2JFT4; A0A0G2JG35; A0A140T8T5; P27546-3; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 2 2 0.5545 0 1 1 1 661.3938 1321.78032 1321.77275 5.73 0.00378 0/0 0 0 9141607 HCD 30 MS2 20.13117 1164.2 110 70.0165 21112 21112 21103 QEplus033719.raw F4 1217.5 998.6 1225.9 927.7 1438.6 1177.2 367 3.3 2 FALSE 1.14E-05 1.24E-06 1.22 -250 102869 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGYANAK [K].lGYANAk.[I] N-Term(TMT6plex); K7(TMT6plex) 6 Q3UIJ2 Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1 A2AAW9; Q3UIJ2; Q3UDF8; Q3TML6; Q9D791; Q9Z0N2 "Eukaryotic translation initiation factor 2 subunit 3, X-linked OS=Mus musculus OX=10090 GN=Eif2s3x PE=1 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=1 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3y PE=2 SV=1; Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Mus musculus OX=10090 GN=Eif2s3y PE=1 SV=2" 0 2 2 0.4327 0 1 1 1 597.86768 1194.72807 1194.72468 2.84 0.0017 0/0 0 0 17352592 HCD 30 MS2 23.27102 1849.3 110 70.0311 21117 21117 21114 QEplus033719.raw F4 1842.5 1723.7 2054.3 1534.7 2121.5 1819.2 176 2.08 1 FALSE 0.002056 0.0375 0.184 -250 102885 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSEFYK [R].sSEFYk.[V] N-Term(TMT6plex); K6(TMT6plex) 5 Q9D9P1 MICOS complex subunit Mic19 OS=Mus musculus OX=10090 GN=Chchd3 PE=1 SV=1 Q9D9P1; Q91VG6; Q9CRB9; D3Z0L4; F6QFL0 MICOS complex subunit Mic19 OS=Mus musculus OX=10090 GN=Chchd3 PE=1 SV=1; Chchd3 protein (Fragment) OS=Mus musculus OX=10090 GN=Chchd3 PE=2 SV=1; MICOS complex subunit Mic19 OS=Mus musculus OX=10090 GN=Chchd3 PE=1 SV=1; MICOS complex subunit Mic19 (Fragment) OS=Mus musculus OX=10090 GN=Chchd3 PE=1 SV=1; MICOS complex subunit Mic19 (Fragment) OS=Mus musculus OX=10090 GN=Chchd3 PE=1 SV=1 0 2 2 0.3756 0 1 1 1 609.84106 1218.67485 1218.67706 -1.81 -0.0011 0/0 0 0 11738906 HCD 30 MS2 30.27858 1560.6 110 70.0359 21119 21119 21114 QEplus033719.raw F4 1533.7 1302.4 1683.1 1584.9 1571.9 1687.8 329 2.05 1 FALSE 0.006275 0.1019 0.001 -250 102894 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETESASLDPQTK [R].eTESASLDPQTk.[Q] N-Term(TMT6plex); K12(TMT6plex) 7 Q8R5G0 Nidogen 2 protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1 Q8C6Z2; Q8R5G0; A0A286YCQ5; Q3US45; Q3TPN0; Q8CFA3; O88322 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen 2 protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen-2 (Fragment) OS=Mus musculus OX=10090 GN=Nid2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen-2 OS=Mus musculus OX=10090 GN=NID-2 PE=4 SV=1; Nidogen-2 OS=Mus musculus OX=10090 GN=Nid2 PE=1 SV=2 0 2 2 0.6847 0 1 1 1 882.4751 1763.94292 1763.94273 0.11 0.00009 0/0 0 0 4653115 HCD 30 MS2 0 285.4 110 70.0406 21121 21121 21114 QEplus033719.raw F4 239.3 261.2 422.5 277.3 213.1 299.3 379 4.06 1 FALSE 1.14E-05 4.12E-12 2.26 -250 102908 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VKMDCQECPEGYR [K].vkMDcQEcPEGYR.[V] N-Term(TMT6plex); K2(TMT6plex); C5(Carbamidomethyl); C8(Carbamidomethyl) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; Q4FZG4; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Flna protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 1 3 3 0.8096 0 1 1 1 710.67761 2130.01828 2130.01824 0.02 0.00002 0/0 0 0 13611420 HCD 30 MS2 19.37 652.8 110 70.0454 21123 21123 21114 QEplus033719.raw F4 601.3 867 737.4 470.5 731.2 509.6 108 4.36 1 FALSE 1.14E-05 2.69E-11 2.105 -250 102920 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVPTPAK [K].aAVPTPAk.[K] N-Term(TMT6plex); K8(TMT6plex) 8 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; A0A087WRM5; Q8CE30; Q9CT46 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 3 3 0.3374 0 1 1 1 404.92892 1212.77222 1212.77163 0.49 0.0002 0/0 0 0 7997315 HCD 30 MS2 24.60294 462.2 110 70.0549 21126 21126 21125 QEplus033719.raw F4 462.9 348.1 473.3 367.7 515.7 605.3 149 2.43 1 FALSE 0.001327 0.01827 0.297 -250 102933 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKPLATTQPAK [K].akPLATTQPAk.[T] N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex) 7 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; P27546-3; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 3 3 0.6684 0 1 1 1 605.05536 1813.15152 1813.15143 0.05 0.00003 0/0 0 0 30232064 HCD 30 MS2 0 1007.5 58.885 70.0597 21128 21128 21125 QEplus033719.raw F4 965.2 864.5 1097.8 804 1206 1107.7 118 5.85 2 FALSE 1.14E-05 5.73E-12 2.233 -250 102940 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKPLATTQPAK [K].akPLATTQPAk.[T] N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex) 7 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; P27546-3; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 4 4 0.6236 0 1 1 1 454.04407 1813.15444 1813.15143 1.66 0.00075 0/0 0 0 8666928 HCD 30 MS2 38.37361 849.2 105.301 70.0621 21129 21129 21125 QEplus033719.raw F4 828 692.1 895.6 663.3 1080.2 935.9 113 4.41 2 FALSE 1.14E-05 6.74E-06 1.08 -250 102947 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPEPTDTTTYK [K].ePEPTDTTTYk.[N] N-Term(TMT6plex); K11(TMT6plex) 1 Q8BK30 "NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv3 PE=1 SV=1" Q8BK30 "NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial OS=Mus musculus OX=10090 GN=Ndufv3 PE=1 SV=1" 0 2 2 0.7326 0 1 1 1 870.45972 1739.91216 1739.91037 1.03 0.0009 0/0 0 0 3132933.75 HCD 30 MS2 0 338.7 110 70.0672 21131 21131 21125 QEplus033719.raw F4 385.4 194.8 335.4 399.2 291.6 425.6 277 3.59 1 FALSE 1.14E-05 3.05E-06 1.145 -250 102955 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKETADAISK [K].akETADAISk.[E] N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex) 6 Q5QGU0 Receptor expression-enhancing protein OS=Mus musculus OX=10090 GN=Reep5 PE=2 SV=1 Q60870; Q5QGU0; G3X8R0; Q921E4; A0A494BBE3; Q9CQG4 Receptor expression-enhancing protein 5 OS=Mus musculus OX=10090 GN=Reep5 PE=1 SV=1; Receptor expression-enhancing protein OS=Mus musculus OX=10090 GN=Reep5 PE=2 SV=1; Receptor expression-enhancing protein OS=Mus musculus OX=10090 GN=Reep5 PE=1 SV=1; Receptor expression-enhancing protein OS=Mus musculus OX=10090 GN=Reep5 PE=2 SV=1; Receptor expression-enhancing protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Reep5 PE=1 SV=1; Receptor expression-enhancing protein OS=Mus musculus OX=10090 GN=Reep5 PE=2 SV=1 1 3 3 0.5139 0 1 1 1 574.35266 1721.04343 1721.04121 1.29 0.00074 0/0 0 0 27723138 HCD 30 MS2 47.36963 1263.8 56.477 70.0694 21132 21132 21125 QEplus033719.raw F4 1182.1 1051.4 1288.9 1498.3 1143.7 1418.2 355 3.6 1 FALSE 1.14E-05 5.72E-07 1.283 -250 102964 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VASSTLLDDRR [R].vASSTLLDDRR.[N] N-Term(TMT6plex) 4 Q9Z1Z0 General vesicular transport factor p115 OS=Mus musculus OX=10090 GN=Uso1 PE=1 SV=2 Q9Z1Z0-2; A0A0J9YUG0; Q9Z1Z0-3; Q9Z1Z0 Isoform 2 of General vesicular transport factor p115 OS=Mus musculus OX=10090 GN=Uso1; General vesicular transport factor p115 OS=Mus musculus OX=10090 GN=Uso1 PE=1 SV=1; Isoform 3 of General vesicular transport factor p115 OS=Mus musculus OX=10090 GN=Uso1; General vesicular transport factor p115 OS=Mus musculus OX=10090 GN=Uso1 PE=1 SV=2 1 3 3 0.5219 0 1 1 1 487.9458 1461.82285 1461.82227 0.39 0.00019 0/0 0 0 23661426 HCD 30 MS2 16.60942 686.2 50.705 70.0717 21133 21133 21125 QEplus033719.raw F4 736.6 494.5 723 561 766.6 835.7 408 4.56 1 FALSE 1.14E-05 1.24E-07 1.41 -250 102977 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVEEEKQEHVEK [K].vVEEEkQEHVEk.[V] N-Term(TMT6plex); K6(TMT6plex); K12(TMT6plex) 16 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 F6XCT0; Q9QXZ0-3; B1ARU4; F6SHS0; E9QA63; E9QNP1; Q5DTZ2; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8 Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; MKIAA1251 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 1 4 4 0.481 0 1 1 1 543.3147 2170.23696 2170.23226 2.17 0.00118 0/0 0 0 12957135 HCD 30 MS2 18.33156 906.6 110 70.0767 21135 21135 21125 QEplus033719.raw F4 905.4 597 1081 877 728.9 1250.2 407 4.47 3 FALSE 1.14E-05 0.0001318 0.834 -250 102984 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVFQNYGK [R].rVFQNYGk.[Y] N-Term(TMT6plex); K8(TMT6plex) 6 B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 Q4FK88; Q3US43; Q4FJV4; Q3U5N9; A0A494BBD8; B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 1 3 3 0.4983 0 1 1 1 490.62619 1469.86402 1469.8629 0.76 0.00037 0/0 0 0 93108912 HCD 30 MS2 47.883 882.7 15.846 70.084 21137 21137 21136 QEplus033719.raw F4 805.4 956.2 1069 506 974.5 985.1 334 3.03 1 FALSE 1.14E-05 0.0005611 0.712 -250 102993 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAQEEYIK [K].aAQEEYIk.[R] N-Term(TMT6plex); K8(TMT6plex) 5 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 Q9CPQ9; A6ZI46; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 0 3 3 0.5414 0 1 1 1 470.60663 1409.80533 1409.80405 0.91 0.00043 0/0 0 0 133450176 HCD 30 MS2 36.4867 903.7 11.318 70.0888 21139 21139 21136 QEplus033719.raw F4 880 569.7 958.9 1115.4 757.4 1140.8 399 2.9 1 FALSE 0.001429 0.02066 0.276 -250 103009 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSGALSVDK [R].sSGALSVDk.[K] N-Term(TMT6plex); K9(TMT6plex) 10 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; A0A0G2JFT4; A0A0G2JG35; A0A140T8T5; P27546-3; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 3 3 0.6033 0 1 1 1 441.263 1321.77445 1321.77275 1.28 0.00057 0/0 0 0 13067888 HCD 30 MS2 40.53145 754.8 93.06 70.0933 21141 21141 21136 QEplus033719.raw F4 756.4 630 779.5 636.5 936.1 790.5 364 3 2 FALSE 0.0001401 0.003264 0.549 -250 103016 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVFQNYGK [R].rVFQNYGk.[Y] N-Term(TMT6plex); K8(TMT6plex) 6 B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 Q4FK88; Q3US43; Q4FJV4; Q3U5N9; A0A494BBD8; B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 1 2 2 0.5325 0 1 1 1 735.43561 1469.86394 1469.8629 0.7 0.00052 0/0 0 0 7205559.5 HCD 30 MS2 20.722 368.5 110 70.0958 21142 21142 21136 QEplus033719.raw F4 329.6 394.2 443.1 262.4 414 367.9 334 2.46 1 FALSE 0.001335 0.01849 0.295 -250 103030 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGYANAK [K].lGYANAk.[I] N-Term(TMT6plex); K7(TMT6plex) 6 Q3UIJ2 Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1 A2AAW9; Q3UIJ2; Q3UDF8; Q3TML6; Q9D791; Q9Z0N2 "Eukaryotic translation initiation factor 2 subunit 3, X-linked OS=Mus musculus OX=10090 GN=Eif2s3x PE=1 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=1 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3y PE=2 SV=1; Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Mus musculus OX=10090 GN=Eif2s3y PE=1 SV=2" 0 3 3 0.5041 0 1 1 1 398.91336 1194.72553 1194.72468 0.71 0.00028 0/0 0 0 2925303.25 HCD 30 MS2 63.31021 339.3 110 70.1008 21144 21144 21136 QEplus033719.raw F4 331.1 297.4 369.5 292.8 383.7 361 205 2.46 1 FALSE 0.001108 0.01462 0.337 -250 103047 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAAEAIKK [K].dAAEAIkk.[Y] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 8 O88844 Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2 Q3TJ51; Q0QER9; O88844; A0A087WPT4; A0A087WRS9; D3YVY3; Q8C338; A0A087WRM4 Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; IDP (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1 1 3 3 0.3955 0 1 1 1 511.65939 1532.96363 1532.9615 1.38 0.00071 0/0 0 0 27711412 HCD 30 MS2 69.8967 1384 44.337 70.1053 21146 21146 21136 QEplus033719.raw F4 1465 1225.3 1511.5 1107.8 1586 1408.2 337 2.2 1 FALSE 3.35E-05 0.001132 0.651 -250 103048 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAAEALKK [K].dAAEALkk.[Y] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 1 Q5HZJ8 Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1 1 3 3 0.3955 0 1 2 2 511.65939 1532.96363 1532.9615 1.38 0.00071 0/0 0 0 27711412 HCD 30 MS2 69.8967 1384 44.337 70.1053 21146 21146 21136 QEplus033719.raw F4 1465 1225.3 1511.5 1107.8 1586 1408.2 337 2.2 1 FALSE 3.35E-05 0.001132 0.651 -250 103063 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YIQAACK [K].yIQAAck.[T] N-Term(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex) 4 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 Q80U89; Q68FD5; Q5SXR6; Q3UPJ3 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1 0 3 3 0.5422 0 1 1 1 437.92203 1311.75153 1311.74951 1.54 0.00067 0/0 0 0 21139690 HCD 30 MS2 67.47007 916.6 32.818 70.1149 21149 21149 21147 QEplus033719.raw F4 891.6 823.5 1077.9 694.7 960 1052.2 257 2.49 1 FALSE 0.002793 0.05483 0.128 -250 103070 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EWGSGSDTLR [R].eWGSGSDTLR.[C] N-Term(TMT6plex) 4 O55143-2; O55143 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2 O55143-2; O55143; Q5DTI2; O54994 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; Sarcoplasmic reticulum Ca2+-ATPase (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1 0 2 2 0.6514 0 1 1 1 668.83911 1336.67095 1336.66946 1.11 0.00074 0/0 0 0 61172792 HCD 30 MS2 2.471187 661.3 35.564 70.1172 21150 21150 21147 QEplus033719.raw F4 707.8 303.2 550.2 1120.1 404.9 881.4 141 3.7 2 FALSE 1.14E-05 3.25E-06 1.14 -250 103076 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCVDVNECATGFHR [R].scVDVNEcATGFHR.[C] N-Term(TMT6plex); C2(Carbamidomethyl); C8(Carbamidomethyl) 7 Q8R5G0 Nidogen 2 protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1 Q8C6Z2; Q8R5G0; A0A286YCQ5; Q3US45; Q3TPN0; Q8CFA3; O88322 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen 2 protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen-2 (Fragment) OS=Mus musculus OX=10090 GN=Nid2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nid2 PE=2 SV=1; Nidogen-2 OS=Mus musculus OX=10090 GN=NID-2 PE=4 SV=1; Nidogen-2 OS=Mus musculus OX=10090 GN=Nid2 PE=1 SV=2 0 3 3 0.8096 0 1 1 1 627.62531 1880.86136 1880.85808 1.74 0.00109 0/0 0 0 15591939 HCD 30 MS2 22.73583 536.4 110 70.1197 21151 21151 21147 QEplus033719.raw F4 499 454.1 640.7 507.1 557.6 560 54 6.25 1 FALSE 1.14E-05 5.92E-14 2.61 -250 103079 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AETEEGPDVLR [R].aETEEGPDVLR.[W] N-Term(TMT6plex) 3 E9Q1S3 Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23a PE=1 SV=1 E9Q1S3; Q8C1E4; Q01405 Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23a PE=1 SV=1; Protein transport protein SEC23 OS=Mus musculus OX=10090 GN=Sec23a PE=2 SV=1; Protein transport protein Sec23A OS=Mus musculus OX=10090 GN=Sec23a PE=1 SV=2 0 2 2 0.7335 0 1 1 1 722.87842 1444.74956 1444.7481 1.01 0.00073 0/0 0 0 15212740 HCD 30 MS2 5.672771 526.7 110 70.1222 21152 21152 21147 QEplus033719.raw F4 529.8 443 563.6 471.3 570.3 582 224 3.49 1 FALSE 1.14E-05 7.57E-10 1.83 -250 103083 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTNFVEFR [K].hTNFVEFR.[N] N-Term(TMT6plex) 2 P62743 AP-2 complex subunit sigma OS=Mus musculus OX=10090 GN=Ap2s1 PE=1 SV=1 Q7TT10; P62743 AP complex subunit sigma OS=Mus musculus OX=10090 GN=Ap2s1 PE=2 SV=1; AP-2 complex subunit sigma OS=Mus musculus OX=10090 GN=Ap2s1 PE=1 SV=1 0 3 3 0.5957 0 1 1 1 426.89813 1278.67984 1278.67924 0.47 0.0002 0/0 0 0 11581735 HCD 30 MS2 47.38408 492.4 92.455 70.1244 21153 21153 21147 QEplus033719.raw F4 503.7 422.7 531.9 393.6 542.3 560.4 279 3.29 1 FALSE 1.14E-05 4.99E-05 0.915 -250 103091 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADTQTYQPYNK [R].aDTQTYQPYNk.[D] N-Term(TMT6plex); K11(TMT6plex) 2 G3UW85 Enhancer of rudimentary homolog OS=Mus musculus OX=10090 GN=Erh PE=1 SV=1 G3UW85; P84089 Enhancer of rudimentary homolog OS=Mus musculus OX=10090 GN=Erh PE=1 SV=1; Enhancer of rudimentary homolog OS=Mus musculus OX=10090 GN=Erh PE=1 SV=1 0 2 2 0.7738 0 1 1 1 893.9751 1786.94292 1786.93758 2.98 0.00267 0/0 0 0 5669115.5 HCD 30 MS2 13.85225 458.4 110 70.127 21154 21154 21147 QEplus033719.raw F4 444.9 469.4 541.1 351.8 524.2 419.1 327 4.42 1 FALSE 1.14E-05 1.30E-09 1.785 -250 103094 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVAPVLIR [K].rVAPVLIR.[E] N-Term(TMT6plex) 4 O70311; O70310 Glycylpeptide N-tetradecanoyltransferase 2 OS=Mus musculus OX=10090 GN=Nmt2 PE=1 SV=1;Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1 O70311; F7APP3; O70310; A2AJH3 Glycylpeptide N-tetradecanoyltransferase 2 OS=Mus musculus OX=10090 GN=Nmt2 PE=1 SV=1; Glycylpeptide N-tetradecanoyltransferase OS=Mus musculus OX=10090 GN=Nmt2 PE=1 SV=1; Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus OX=10090 GN=Nmt1 PE=1 SV=1; Glycylpeptide N-tetradecanoyltransferase OS=Mus musculus OX=10090 GN=Nmt2 PE=1 SV=1 1 3 3 0.4024 0 1 1 1 384.93088 1152.77808 1152.77783 0.22 0.00008 0/0 0 0 6699027.5 HCD 30 MS2 62.82316 293.5 110 70.1295 21155 21155 21147 QEplus033719.raw F4 287.9 263.3 335.9 249.5 296.3 328.3 22 4.1 2 FALSE 1.14E-05 1.44E-07 1.397 -250 103104 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTSDDVK [K].lTSDDVk.[E] N-Term(TMT6plex); K7(TMT6plex) 3 Q5BLJ7 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1 A0A0U1RQ71; Q921R2; Q5BLJ7 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1; 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1; 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1 0 3 3 0.2754 0 1 1 1 412.5802 1235.72605 1235.72474 1.06 0.00044 0/0 0 0 6065787 HCD 30 MS2 27.70553 709.6 110 70.1319 21156 21156 21147 QEplus033719.raw F4 630.2 647.2 839.6 552.4 727.1 860.9 324 2.36 1 FALSE 0.001506 0.02204 0.265 -250 103119 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQAQMK [K].lQAQMk.[D] N-Term(TMT6plex); K6(TMT6plex) 16 Q69ZX3; Q5SV64; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; Q811J9; Q80T68; A0A2R8VHF9; A0A338P6K2; O08638-2; Q7TQJ6; O08638; Q5SV64; Q3UH59; Q8VDD5; E9QPE7; Q6PB65; Q4KMN4; Q99JJ3; Q61879 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh10 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 0 2 2 0.2621 0 1 1 1 588.86267 1176.71807 1176.71749 0.49 0.00029 0/0 0 0 205901056 HCD 30 MS2 15.29152 964.3 6.559 70.1418 21159 21159 21158 QEplus033719.raw F4 796.3 887.5 1136.6 716.1 1286 963.1 436 2.48 3 FALSE 0.005879 0.09799 0.012 -250 103137 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVQTNDLK [R].eVQTNDLk.[E] N-Term(TMT6plex); K8(TMT6plex) 5 P97351 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3 Q3UJU5; P97351; Q3U5P8; Q3UAC2; Q9D1S3 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1 0 3 3 0.3933 0 1 1 1 468.9422 1404.81205 1404.80987 1.55 0.00073 0/0 0 0 154720240 HCD 30 MS2 9.370796 625.1 11.234 70.1463 21161 21161 21158 QEplus033719.raw F4 612.4 502.3 687.2 578.9 633.4 736.3 503 3.28 1 FALSE 0.001083 0.01403 0.345 -250 103142 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFPGYDSESK [K].rFPGYDSESk.[E] N-Term(TMT6plex); K10(TMT6plex) 5 P47962 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3 Q3THE1; D3YYV8; P47962; Q3TKR5; Q3U850 Ribosomal_L18_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; 60S ribosomal protein L5 (Fragment) OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=1; 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3; Ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; Ribosomal_L18_c domain-containing protein OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1 1 3 3 0.5972 0 1 1 1 548.6319 1643.88114 1643.87934 1.09 0.0006 0/0 0 0 58008292 HCD 30 MS2 14.97663 1361 42.619 70.1508 21163 21163 21158 QEplus033719.raw F4 1428.7 1172.2 1521.8 1169.1 1396 1478 314 4.32 1 FALSE 1.14E-05 5.64E-08 1.474 -250 103154 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVIEEPK [K].gVIEEPk.[-] N-Term(TMT6plex); K7(TMT6plex) 1 Q9D7M1 Glucose-induced degradation protein 8 homolog OS=Mus musculus OX=10090 GN=Gid8 PE=1 SV=1 Q9D7M1 Glucose-induced degradation protein 8 homolog OS=Mus musculus OX=10090 GN=Gid8 PE=1 SV=1 0 2 2 0.4484 0 1 1 1 615.37939 1229.75151 1229.75056 0.77 0.00048 0/0 0 0 9025139 HCD 30 MS2 29.66686 1050.1 110 70.1556 21165 21165 21158 QEplus033719.raw F4 1035.5 803.6 1153.4 950 1108.3 1250 341 2.52 1 FALSE 0.005456 0.09254 0.027 -250 103176 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KWQPDK [K].kWQPDk.[L] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 13 E9QP49; Q99MS7 EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1;EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1 Q99MS7-3; E9QP49; Q69ZW3-2; Q99MS7; A0A494BA91; A0A494B9G7; Q99MS7-4; Q5SS55; A0A494BBL8; Q99MS7-5; G5E8Y6; Q99MS7-2; Q69ZW3 Isoform 3 of EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1; EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1; Isoform 2 of EH domain-binding protein 1 OS=Mus musculus OX=10090 GN=Ehbp1; EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1; EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1; EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1; Isoform 4 of EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1; EH domain-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ehbp1 PE=1 SV=1; EH domain-binding protein 1-like protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1; Isoform 5 of EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1; EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1 PE=1 SV=1; Isoform 2 of EH domain-binding protein 1-like protein 1 OS=Mus musculus OX=10090 GN=Ehbp1l1; EH domain-binding protein 1 OS=Mus musculus OX=10090 GN=Ehbp1 PE=1 SV=3 1 3 3 0.4298 0 1 1 1 496.97653 1488.91504 1488.91416 0.59 0.00029 0/0 0 0 10407202 HCD 30 MS2 58.81237 1223.8 110 70.1626 21168 21168 21158 QEplus033719.raw F4 1314.7 808.5 1222.9 1237.1 1257.5 1501.8 345 2.28 2 FALSE 0.004658 0.0822 0.056 -250 103183 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAAKGEATAERPGEAAVASSPSK [K].tAAkGEATAERPGEAAVASSPSk.[A] N-Term(TMT6plex); K4(TMT6plex); K23(TMT6plex) 3 P26645 Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2 A0A0A1HAM8; P26645; Q05BL6 80K protein OS=Mus musculus OX=10090 GN=Marcks PE=2 SV=1; Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2; Marcks protein (Fragment) OS=Mus musculus OX=10090 GN=Marcks PE=2 SV=1 1 4 4 0.6675 0 1 1 1 719.15546 2873.6 2873.59356 2.24 0.00161 0/0 0 0 4768877.5 HCD 30 MS2 9.339015 350.8 110 70.1724 21171 21171 21169 QEplus033719.raw F4 334.7 447.8 381.4 228 440.4 272.2 385 4.12 1 FALSE 1.14E-05 1.79E-13 2.519 -250 103191 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQHNLEQQIQAR [R].mQHNLEQQIQAR.[N] N-Term(TMT6plex) 12 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; Q3TYI8; B2RXX6; Q6PA04; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5; Q58ES7 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1" 0 3 3 0.7332 0 1 1 1 575.64038 1724.90659 1724.90635 0.14 0.00008 0/0 0 0 21450372 HCD 30 MS2 35.66686 575.9 47.763 70.1769 21173 21173 21169 QEplus033719.raw F4 508.5 684.1 685.5 443.4 567.7 566 276 5.21 2 FALSE 1.14E-05 2.24E-08 1.551 -250 103206 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IFQAHK [K].iFQAHk.[N] N-Term(TMT6plex); K6(TMT6plex) 4 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q8C9Z8; Q80TM2; Q3UHS6; P26039 FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 3 3 0.4708 0 1 1 1 401.25357 1201.74616 1201.74575 0.34 0.00014 0/0 0 0 5921644 HCD 30 MS2 56.75088 491.6 110 70.1844 21176 21176 21169 QEplus033719.raw F4 515.6 412.5 522.1 366.6 631.3 501.6 323 3.25 1 FALSE 1.14E-05 0.0007089 0.692 -250 103215 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDPASEAK [R].iDPASEAk.[L] N-Term(TMT6plex); K8(TMT6plex) 1 P42128 Forkhead box protein K1 OS=Mus musculus OX=10090 GN=Foxk1 PE=1 SV=2 P42128 Forkhead box protein K1 OS=Mus musculus OX=10090 GN=Foxk1 PE=1 SV=2 0 2 2 0.3571 0 1 1 1 644.8786 1288.74993 1288.75129 -1.06 -0.00068 0/0 0 0 5890060 HCD 30 MS2 43.0883 801.1 110 70.1869 21177 21177 21169 QEplus033719.raw F4 768.1 707.3 889.6 690 841.1 910.8 357 2.24 1 FALSE 1.14E-05 0.0002971 0.766 -250 103225 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILIHQK [R].iLIHQk.[G] N-Term(TMT6plex); K6(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A2AT70; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.4577 0 1 1 1 403.94098 1209.80838 1209.80835 0.03 0.00001 0/0 0 0 5420671 HCD 30 MS2 18.493 500.8 110 70.1894 21178 21178 21169 QEplus033719.raw F4 650 184.6 429.4 694.4 291.9 754.6 44 3.19 2 FALSE 0.00079 0.01093 0.39 -250 103252 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TATNVPANVSK [K].tATNVPANVSk.[G] N-Term(TMT6plex); K11(TMT6plex) 6 F6R6F1 RalBP1-associated Eps domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Reps1 PE=1 SV=1 O54916-3; F6R6F1; O54916-4; D3Z2E3; E9Q632; O54916 Isoform 3 of RalBP1-associated Eps domain-containing protein 1 OS=Mus musculus OX=10090 GN=Reps1; RalBP1-associated Eps domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Reps1 PE=1 SV=1; Isoform 4 of RalBP1-associated Eps domain-containing protein 1 OS=Mus musculus OX=10090 GN=Reps1; RalBP1-associated Eps domain-containing protein 1 OS=Mus musculus OX=10090 GN=Reps1 PE=1 SV=1; RalBP1-associated Eps domain-containing protein 1 OS=Mus musculus OX=10090 GN=Reps1 PE=1 SV=1; RalBP1-associated Eps domain-containing protein 1 OS=Mus musculus OX=10090 GN=Reps1 PE=1 SV=2 0 2 2 0.6998 0 1 1 1 780.46179 1559.91631 1559.91573 0.37 0.00029 0/0 0 0 3790772 HCD 30 MS2 0 238.4 110 70.2018 21182 21182 21180 QEplus033719.raw F4 221.5 228.2 271.6 191.2 272.2 245.6 444 4.03 1 FALSE 1.14E-05 3.01E-10 1.906 -250 103262 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADTQTYQPYNK [R].aDTQTYQPYNk.[D] N-Term(TMT6plex); K11(TMT6plex) 2 G3UW85 Enhancer of rudimentary homolog OS=Mus musculus OX=10090 GN=Erh PE=1 SV=1 G3UW85; P84089 Enhancer of rudimentary homolog OS=Mus musculus OX=10090 GN=Erh PE=1 SV=1; Enhancer of rudimentary homolog OS=Mus musculus OX=10090 GN=Erh PE=1 SV=1 0 3 3 0.6641 0 1 1 1 596.31757 1786.93814 1786.93758 0.31 0.00019 0/0 0 0 59781200 HCD 30 MS2 15.5413 686.7 34.147 70.2063 21184 21184 21180 QEplus033719.raw F4 655.6 646.8 815.6 512.7 667.8 821.8 302 3.87 1 FALSE 1.14E-05 0.0001268 0.837 -250 103274 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELVSDANQHVK [K].eLVSDANQHVk.[S] N-Term(TMT6plex); K11(TMT6plex) 4 Q76MZ3 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=3 G3UWL2; Q7TMX2; Q8C2E1; Q76MZ3 "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform (Fragment) OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=1; Protein phosphatase 2 (Formerly 2A), regulatory subunit A (PR 65), alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppp2r1a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=3" 0 3 3 0.7352 0 1 1 1 566.65833 1697.96042 1697.95865 1.04 0.00059 0/0 0 0 46155180 HCD 30 MS2 8.895666 584.2 33.501 70.2108 21186 21186 21180 QEplus033719.raw F4 638.5 497.2 605.5 521 718 525.2 429 4.91 1 FALSE 1.14E-05 1.04E-10 1.994 -250 103277 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGVHGGLINK [K].eGVHGGLINk.[K] N-Term(TMT6plex); K10(TMT6plex) 3 Q5SX50 Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=1 SV=1 Q3U7V7; Q8CEH8; Q5SX50 Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=2 SV=1; Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=2 SV=1; Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=1 SV=1 0 3 3 0.6447 0 1 1 1 494.63358 1481.88617 1481.88403 1.44 0.00071 0/0 0 0 29882856 HCD 30 MS2 10.56015 837.4 51.221 70.2131 21187 21187 21180 QEplus033719.raw F4 927.1 721.5 885.7 645.8 958.4 885.8 348 4.56 1 FALSE 1.14E-05 1.28E-08 1.597 -250 103284 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMTCIK [K].nMTcIk.[V] N-Term(TMT6plex); C4(Carbamidomethyl); K6(TMT6plex) 3 Q64511 DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2 Q3TR62; Q8BRY5; Q64511 DNA topoisomerase 2 (Fragment) OS=Mus musculus OX=10090 GN=Top2b PE=2 SV=1; DNA topoisomerase 2 (Fragment) OS=Mus musculus OX=10090 GN=Top2b PE=2 SV=1; DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2 0 2 2 0.4962 0 1 1 1 612.84656 1224.68584 1224.68447 1.12 0.00068 0/0 0 0 15387755 HCD 30 MS2 0 1241.4 110 70.2156 21188 21188 21180 QEplus033719.raw F4 1186.4 1142.4 1355 904.5 1563.9 1296.2 245 2.62 1 FALSE 0.003666 0.07027 0.087 -250 103290 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VASLEESKGDR [K].vASLEESkGDR.[S] N-Term(TMT6plex); K8(TMT6plex) 1 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 1 3 3 0.4581 0 1 1 1 550.31458 1648.92917 1648.92702 1.31 0.00072 0/0 0 0 67624464 HCD 30 MS2 43.7759 994.8 21.482 70.2203 21190 21190 21180 QEplus033719.raw F4 941.9 919.3 1054 808.2 1250.8 994.7 451 3.34 1 FALSE 1.14E-05 3.30E-06 1.139 -250 103308 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQEEIVAK [R].tQEEIVAk.[V] N-Term(TMT6plex); K8(TMT6plex) 2 A0A0R4J0Z1 Protein disulfide-isomerase A4 OS=Mus musculus OX=10090 GN=Pdia4 PE=1 SV=1 A0A0R4J0Z1; P08003 Protein disulfide-isomerase A4 OS=Mus musculus OX=10090 GN=Pdia4 PE=1 SV=1; Protein disulfide-isomerase A4 OS=Mus musculus OX=10090 GN=Pdia4 PE=1 SV=3 0 2 2 0.5428 0 1 1 1 688.41498 1375.82268 1375.8197 2.16 0.00149 0/0 0 0 19920476 HCD 30 MS2 31.22074 1068.9 79.034 70.2299 21193 21193 21191 QEplus033719.raw F4 1086.6 1050.2 1195.8 784.9 1249.2 1047 474 3.39 1 FALSE 1.14E-05 9.49E-05 0.861 -250 103314 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVEVTVHK [K].qVEVTVHk.[G] N-Term(TMT6plex); K8(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.5532 0 1 1 1 466.62286 1397.85404 1397.85167 1.69 0.00079 0/0 0 0 37844584 HCD 30 MS2 38.65424 813.2 32.502 70.2321 21194 21194 21191 QEplus033719.raw F4 959.5 589 841.3 721.5 872.4 895.6 219 3.85 2 FALSE 1.14E-05 1.17E-06 1.225 -250 103320 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HALQSASAGSGSFTDVR [R].hALQSASAGSGSFTDVR.[T] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; B9EHT6; A0A087WR50; Q3UGY5; Q4KL80; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.8639 0 1 1 1 640.66339 1919.97562 1919.97727 -0.86 -0.00055 0/0 0 0 20836530 HCD 30 MS2 0 515 110 70.2369 21196 21196 21191 QEplus033719.raw F4 515.7 456.6 541.2 554.2 546.8 475.7 272 6.17 3 FALSE 1.14E-05 3.55E-13 2.462 -250 103355 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPVETAEVNNDK [K].ePVETAEVNNDk.[M] N-Term(TMT6plex); K12(TMT6plex) 2 Q8WTY4 Anamorsin OS=Mus musculus OX=10090 GN=Ciapin1 PE=1 SV=1 Q8WTY4; E0CYY1 Anamorsin OS=Mus musculus OX=10090 GN=Ciapin1 PE=1 SV=1; Anamorsin (Fragment) OS=Mus musculus OX=10090 GN=Ciapin1 PE=1 SV=2 0 3 3 0.7029 0 1 1 1 601.65735 1802.95749 1802.95363 2.14 0.00129 0/0 0 0 9048288 HCD 30 MS2 17.0181 638 110 70.2464 21200 21200 21191 QEplus033719.raw F4 632.7 546.1 673.8 510.4 766.9 698 360 5.15 1 FALSE 1.14E-05 2.29E-07 1.359 -250 103362 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFPGYDSESK [K].rFPGYDSESk.[E] N-Term(TMT6plex); K10(TMT6plex) 5 P47962 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3 Q3THE1; D3YYV8; P47962; Q3TKR5; Q3U850 Ribosomal_L18_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; 60S ribosomal protein L5 (Fragment) OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=1; 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3; Ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; Ribosomal_L18_c domain-containing protein OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1 1 2 2 0.6071 0 1 1 1 822.44403 1643.88078 1643.87934 0.88 0.00072 0/0 0 0 11054411 HCD 30 MS2 0 421.3 110 70.249 21201 21201 21191 QEplus033719.raw F4 410.9 389.8 508.2 345.8 447.5 425.6 319 2.52 1 FALSE 3.35E-05 0.001309 0.638 -250 103377 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHIEDPEQVVR [R].eHIEDPEQVVR.[E] N-Term(TMT6plex) 1 Q99LN9 Deoxyhypusine hydroxylase OS=Mus musculus OX=10090 GN=Dohh PE=1 SV=2 Q99LN9 Deoxyhypusine hydroxylase OS=Mus musculus OX=10090 GN=Dohh PE=1 SV=2 0 3 3 0.6161 0 1 1 1 527.2807 1579.82755 1579.82775 -0.13 -0.00007 0/0 0 0 7512270.5 HCD 30 MS2 32.2881 708.3 110 70.2588 21204 21204 21202 QEplus033719.raw F4 857.3 482.3 618.4 658.1 932.2 701.7 295 4.48 1 FALSE 1.14E-05 4.74E-07 1.299 -250 103384 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADQLYK [K].aDQLYk.[Q] N-Term(TMT6plex); K6(TMT6plex) 3 Q3UFJ3 Pyruvate dehydrogenase E1 component subunit alpha OS=Mus musculus OX=10090 GN=Pdha1 PE=1 SV=1 Q9D9X9; Q3UFJ3; P35487 "Pyruvate dehydrogenase E1 component subunit alpha OS=Mus musculus OX=10090 GN=Pdha2 PE=2 SV=1; Pyruvate dehydrogenase E1 component subunit alpha OS=Mus musculus OX=10090 GN=Pdha1 PE=1 SV=1; Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial OS=Mus musculus OX=10090 GN=Pdha2 PE=1 SV=1" 0 2 2 0.2768 0 1 1 1 598.35803 1195.70879 1195.70869 0.08 0.00005 0/0 0 0 69882840 HCD 30 MS2 26.06055 1521 24.157 70.261 21205 21205 21202 QEplus033719.raw F4 1489.6 1108.1 1637.1 1775.8 1313.7 1801.5 315 2.24 1 FALSE 0.006642 0.1055 -0.008 -250 103392 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYCYDLR [K].tYcYDLR.[M] N-Term(TMT6plex); C3(Carbamidomethyl) 5 Q791V5 Mitochondrial carrier homolog 2 OS=Mus musculus OX=10090 GN=Mtch2 PE=1 SV=1 Q791V5; Q3UA17; A2AFW6; Q05C68; Q9D050 Mitochondrial carrier homolog 2 OS=Mus musculus OX=10090 GN=Mtch2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mtch2 PE=2 SV=1; Mitochondrial carrier homolog 2 OS=Mus musculus OX=10090 GN=Mtch2 PE=1 SV=1; Mtch2 protein (Fragment) OS=Mus musculus OX=10090 GN=Mtch2 PE=2 SV=1; Mitochondrial carrier homolog 2 OS=Mus musculus OX=10090 GN=Mtch2 PE=1 SV=1 0 2 2 0.5144 0 1 1 1 610.30389 1219.60051 1219.59787 2.16 0.00132 0/0 0 0 25786526 HCD 30 MS2 62.27232 1461.8 47.959 70.2633 21206 21206 21202 QEplus033719.raw F4 1373.3 1156.1 1644.1 1544.1 1383.2 1670.1 110 2.08 1 FALSE 0.002064 0.03788 0.182 -250 103399 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVSDICK [K].aVSDIck.[T] N-Term(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex) 3 Q3TLE2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fermt2 PE=1 SV=1 A6X940; Q3UMA4; Q3TLE2 Fermitin family homolog 2 (Fragment) OS=Mus musculus OX=10090 GN=Fermt2 PE=1 SV=1; B41 domain-containing protein OS=Mus musculus OX=10090 GN=Fermt2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fermt2 PE=1 SV=1 0 2 2 0.573 0 1 1 1 625.86298 1250.71868 1250.71788 0.64 0.0004 0/0 0 0 18556548 HCD 30 MS2 8.346578 1337.7 110 70.2658 21207 21207 21202 QEplus033719.raw F4 1415.7 1153.4 1447.3 1039.2 1535.3 1435.5 390 2.74 1 FALSE 0.0005556 0.008295 0.434 -250 103409 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIDSEEVGK [R].nIDSEEVGk.[I] N-Term(TMT6plex); K9(TMT6plex) 5 E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" A0A087WS16; Q05504; J3QQ16; O88493; E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen alpha 3 chain type VI (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Type VI collagen alpha 3 subunit OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" 0 2 2 0.5728 0 1 1 1 724.90485 1448.80242 1448.79969 1.88 0.00136 0/0 0 0 11904054 HCD 30 MS2 13.84177 770.8 110 70.2683 21208 21208 21202 QEplus033719.raw F4 791.5 738 741.8 647.2 923.9 782.6 440 3.02 1 FALSE 1.14E-05 4.46E-06 1.114 -250 103416 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STPEYFAER [R].sTPEYFAER.[L] N-Term(TMT6plex) 8 P14824; Q99JX6 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3;Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 Q3V2Z4; P14824; F8WIT2; Q3UI56; Q3TUI1; Q8CEX0; Q99JX6; Q3UDK4 Annexin OS=Mus musculus OX=10090 PE=2 SV=1; Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 0 2 2 0.5694 0 1 1 1 664.83887 1328.67046 1328.6684 1.55 0.00103 0/0 0 0 9985761 HCD 30 MS2 45.4854 1037.6 110 70.2708 21209 21209 21202 QEplus033719.raw F4 1057.6 830.2 1091.6 932.2 1093 1220.9 122 3.46 2 FALSE 1.14E-05 0.0001636 0.816 -250 103433 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVVFGK [K].hVVFGk.[VI] N-Term(TMT6plex); K6(TMT6plex) 12 P24369; Q3UAJ1; Q3UWH9; P30412 Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus OX=10090 GN=Ppib PE=1 SV=2;Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1;Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1;Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus OX=10090 GN=Ppic PE=1 SV=1 P24369; Q3TE63; Q3UAJ1; Q3UWH9; P30412; Q5SVY2; Q9CZK9; Q9D868; A0A1L1SST0; Q4G0C5; A2BGI8; Q3UY37 Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus OX=10090 GN=Ppib PE=1 SV=2; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus OX=10090 GN=Ppic PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=2 SV=1; Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppia PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase (Fragment) OS=Mus musculus OX=10090 GN=Ppih PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase OS=Mus musculus OX=10090 PE=2 SV=1 0 3 3 0.5909 0 1 1 1 382.24661 1144.72528 1144.72429 0.87 0.00033 0/0 0 0 4263198.5 HCD 30 MS2 73.79104 641.8 110 70.2758 21211 21211 21202 QEplus033719.raw F4 820.6 512.4 710.7 469.8 651.9 685.4 239 2.64 4 FALSE 0.001284 0.01744 0.305 -250 103459 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KSEATIPGK [K].kSEATIPGk.[T] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 1 Q8R1F0 Leydig cell tumor 10 kDa protein homolog OS=Mus musculus OX=10090 GN=D8Ertd738e PE=3 SV=1 Q8R1F0 Leydig cell tumor 10 kDa protein homolog OS=Mus musculus OX=10090 GN=D8Ertd738e PE=3 SV=1 1 3 3 0.6623 0 1 1 1 540.01038 1618.01657 1618.01427 1.43 0.00077 0/0 0 0 15199894 HCD 30 MS2 34.57326 1316.4 110 70.2881 21215 21215 21213 QEplus033719.raw F4 1315.9 1118.3 1373.3 1029.6 1567.2 1493.8 369 3.85 1 FALSE 1.14E-05 0.0003805 0.745 -250 103473 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDIAGR [R].iDIAGR.[D] N-Term(TMT6plex) 2 P61164 Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1 P61164; A0A494BB86 Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1; Alpha-centractin OS=Mus musculus OX=10090 GN=Actr1a PE=1 SV=1 0 2 2 0.3254 0 1 1 1 437.27206 873.53685 873.53553 1.51 0.00066 0/0 0 0 23155694 HCD 30 MS2 36.55234 928.7 54.747 70.2926 21217 21217 21213 QEplus033719.raw F4 919.6 729.2 1065.8 760.5 1005.9 1091.4 114 2.09 1 FALSE 0.002552 0.05025 0.141 -250 103474 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDIAGR [R].lDIAGR.[D] N-Term(TMT6plex) 2 Q5SW83 Uncharacterized protein OS=Mus musculus OX=10090 GN=Actr2 PE=1 SV=1 Q5SW83; Q8BMA4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Actr2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.3254 0 1 2 2 437.27206 873.53685 873.53553 1.51 0.00066 0/0 0 0 23155694 HCD 30 MS2 36.55234 928.7 54.747 70.2926 21217 21217 21213 QEplus033719.raw F4 919.6 729.2 1065.8 760.5 1005.9 1091.4 114 2.09 1 FALSE 0.002552 0.05025 0.141 -250 103475 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDLAGR [R].lDLAGR.[D] N-Term(TMT6plex) 39 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" D3Z2K3; Q8BFZ3; Q3TG92; I6L9D2; P63268; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61275; Q3UAF6; Q3UD81; Q3U122; E9Q1F2; Q3UAA9; B2RRX1; A0A494B9T3; Q61272; Q3U5R4; Q3UAF7; G3UZ07; Q3TIJ9; P62737; P68134; Q61276; Q3UBP6; D3YZY0; A0A0U1RQ96; E9Q5F4; Q3UBQ4; P68033; P63260; Q61852; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actg2 protein OS=Mus musculus OX=10090 GN=Actg2 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=2; Actin, gamma-enteric smooth muscle (Fragment) OS=Mus musculus OX=10090 GN=Actg2 PE=3 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 0 2 2 0.3254 0 1 3 3 437.27206 873.53685 873.53553 1.51 0.00066 0/0 0 0 23155694 HCD 30 MS2 36.55234 928.7 54.747 70.2926 21217 21217 21213 QEplus033719.raw F4 919.6 729.2 1065.8 760.5 1005.9 1091.4 114 2.09 4 FALSE 0.002552 0.05025 0.141 -250 103487 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGVHGGLINK [K].eGVHGGLINk.[K] N-Term(TMT6plex); K10(TMT6plex) 3 Q5SX50 Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=1 SV=1 Q3U7V7; Q8CEH8; Q5SX50 Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=2 SV=1; Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=2 SV=1; Profilin OS=Mus musculus OX=10090 GN=Pfn1 PE=1 SV=1 0 2 2 0.5627 0 1 1 1 741.44647 1481.88567 1481.88403 1.1 0.00082 0/0 0 0 12172226 HCD 30 MS2 19.22886 718.7 110 70.2977 21219 21219 21213 QEplus033719.raw F4 763.8 698 783.8 521.4 829.9 715.5 347 3.91 1 FALSE 1.14E-05 4.56E-08 1.492 -250 103505 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLEAQELAR [R].nLEAQELAR.[I] N-Term(TMT6plex) 7 Q7TQH0 Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1 Q7TQH0-3; Q7TQH0; Q7TQH0-2; E9Q5Q0; Q3TGG2; Q3TYH7; A0A0U1RPL0 Isoform 3 of Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l; Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1; Isoform 2 of Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l; Ataxin-2-like protein (Fragment) OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=2; Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1; LsmAD domain-containing protein OS=Mus musculus OX=10090 GN=Atxn2l PE=2 SV=1; Ataxin-2-like protein OS=Mus musculus OX=10090 GN=Atxn2l PE=1 SV=1 0 2 2 0.5176 0 1 1 1 636.86078 1272.71428 1272.71093 2.63 0.00168 0/0 0 0 6607370.5 HCD 30 MS2 15.45962 710 110 70.3027 21221 21221 21213 QEplus033719.raw F4 706.6 634 772.3 534.2 828.4 784.4 358 3.69 1 FALSE 1.14E-05 1.18E-06 1.224 -250 103539 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WAPNENK [R].wAPNENk.[F] N-Term(TMT6plex); K7(TMT6plex) 6 Q3U094 Actin-related protein 2/3 complex subunit OS=Mus musculus OX=10090 GN=Arpc1b PE=2 SV=1 Q3U094; Q9WV32; Q3TBA2; Q91Z25; F6VVE6; Q3TCE7 Actin-related protein 2/3 complex subunit OS=Mus musculus OX=10090 GN=Arpc1b PE=2 SV=1; Actin-related protein 2/3 complex subunit 1B OS=Mus musculus OX=10090 GN=Arpc1b PE=1 SV=4; Actin-related protein 2/3 complex subunit OS=Mus musculus OX=10090 GN=Arpc1b PE=2 SV=1; Actin-related protein 2/3 complex subunit OS=Mus musculus OX=10090 GN=Arpc1b PE=1 SV=1; Actin-related protein 2/3 complex subunit 1B (Fragment) OS=Mus musculus OX=10090 GN=Arpc1b PE=1 SV=1; Actin-related protein 2/3 complex subunit OS=Mus musculus OX=10090 GN=Arpc1b PE=2 SV=1 0 2 2 0.5146 0 1 1 1 658.87225 1316.73723 1316.73631 0.7 0.00046 0/0 0 0 41892860 HCD 30 MS2 12.76865 1261 52.316 70.3171 21226 21226 21224 QEplus033719.raw F4 1247 1144.9 1418.9 949.9 1511.5 1293.9 348 2.06 1 FALSE 0.001421 0.02036 0.278 -250 103547 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTSDDVK [K].lTSDDVk.[E] N-Term(TMT6plex); K7(TMT6plex) 3 Q5BLJ7 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1 A0A0U1RQ71; Q921R2; Q5BLJ7 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1; 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1; 40S ribosomal protein S13 OS=Mus musculus OX=10090 GN=Rps13 PE=1 SV=1 0 2 2 0.3171 0 1 1 1 618.3667 1235.72612 1235.72474 1.12 0.00069 0/0 0 0 425453888 HCD 30 MS2 4.074014 1059.8 5.075 70.3194 21227 21227 21224 QEplus033719.raw F4 959.6 883.5 1103.9 941.8 1249 1221.1 324 2.46 1 FALSE 0.001456 0.02097 0.273 -250 103566 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTNSMMMHGR [R].lTNSMMMHGR.[N] N-Term(TMT6plex) 4 Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 P97461; D3Z1S8; D3YYM6; Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=3; 40S ribosomal protein S5 (Fragment) OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1; 40S ribosomal protein S5 (Fragment) OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1; 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 0 3 3 0.7746 0 1 1 1 469.569 1406.69245 1406.69041 1.45 0.00068 0/0 0 0 62778292 HCD 30 MS2 55.27394 771.5 20.063 70.3239 21229 21229 21224 QEplus033719.raw F4 718.3 595.4 786.1 814.4 831.5 883.6 124 4.26 1 FALSE 1.14E-05 7.02E-07 1.267 -250 103573 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CSVASIK [R].cSVASIk.[T] N-Term(TMT6plex); C1(Carbamidomethyl); K7(TMT6plex) 1 Q99L45 Eukaryotic translation initiation factor 2 subunit 2 OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1 Q99L45 Eukaryotic translation initiation factor 2 subunit 2 OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1 0 2 2 0.4783 0 1 1 1 611.86597 1222.72466 1222.72296 1.38 0.00085 0/0 0 0 34986260 HCD 30 MS2 22.44717 1537.6 57.016 70.3262 21230 21230 21224 QEplus033719.raw F4 1614.6 1237.8 1680 1356.5 1604.6 1731.8 313 2.53 1 FALSE 0.001028 0.01338 0.354 -250 103582 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DEAAAAAGGEGAAAPGEQAGGAGAEGAAGGEPR [K].dEAAAAAGGEGAAAPGEQAGGAGAEGAAGGEPR.[E] N-Term(TMT6plex) 2 P26645 Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2 A0A0A1HAM8; P26645 80K protein OS=Mus musculus OX=10090 GN=Marcks PE=2 SV=1; Myristoylated alanine-rich C-kinase substrate OS=Mus musculus OX=10090 GN=Marcks PE=1 SV=2 0 4 4 0.8404 0 1 1 1 745.85175 2980.38515 2980.38301 0.72 0.00053 0/0 0 0 4418632.5 HCD 30 MS2 13.5957 171.3 110 70.3287 21231 21231 21224 QEplus033719.raw F4 182.5 119.4 179.2 173 174.1 199.8 95 9.15 1 FALSE 1.14E-05 6.31E-16 3.676 -250 103599 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HALQSASAGSGSFTDVR [R].hALQSASAGSGSFTDVR.[T] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; B9EHT6; A0A087WR50; Q3UGY5; Q4KL80; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.7889 0 1 1 1 960.4942 1919.98113 1919.97727 2.01 0.00193 0/0 0 0 7651539.5 HCD 30 MS2 0 88.1 110 70.3337 21233 21233 21224 QEplus033719.raw F4 80.2 80.8 90.8 156.9 79.9 39.9 306 5.97 3 FALSE 1.14E-05 6.31E-16 3.831 -250 103607 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QYESGTFK [K].qYESGTFk.[I] N-Term(TMT6plex); K8(TMT6plex) 2 Q544K9 OMPdecase OS=Mus musculus OX=10090 GN=Umps PE=1 SV=1 Q544K9; Q3TVV7 OMPdecase OS=Mus musculus OX=10090 GN=Umps PE=1 SV=1; OMPdecase OS=Mus musculus OX=10090 GN=Umps PE=2 SV=1 0 2 2 0.5044 0 1 1 1 709.39111 1417.77495 1417.77275 1.55 0.0011 0/0 0 0 4301311.5 HCD 30 MS2 18.47927 391.5 110 70.3363 21234 21234 21224 QEplus033719.raw F4 381.5 336 436.7 324.5 428.1 442.1 327 2.26 1 FALSE 0.0001603 0.003547 0.54 -250 103615 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AWEVDTCR [K].aWEVDTcR.[G] N-Term(TMT6plex); C7(Carbamidomethyl) 5 Q8CIE6 Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2 Q63ZW9; Q8CIE6; F6XJN3; F8WHL2; Q8BTF0 Copa protein (Fragment) OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2; Coatomer subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Copa PE=1 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1 0 2 2 0.6783 0 1 1 1 633.31201 1265.61675 1265.61459 1.71 0.00108 0/0 0 0 23268730 HCD 30 MS2 52.87164 1357.1 70.057 70.3436 21236 21236 21235 QEplus033719.raw F4 1465.3 1167 1421.2 1469.6 1237.9 1381.5 75 2.86 1 FALSE 0.0001187 0.003112 0.554 -250 103632 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AETPGPQIK [K].aETPGPQIk.[E] N-Term(TMT6plex); K9(TMT6plex) 1 O35685 Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1 O35685 Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1 0 2 2 0.5331 0 1 1 1 699.92236 1398.83745 1398.83569 1.26 0.00088 0/0 0 0 15106992 HCD 30 MS2 61.66176 1031.1 110 70.3508 21239 21239 21235 QEplus033719.raw F4 1065 795.3 1094.8 928.1 1081.6 1221.7 285 2.87 1 FALSE 0.00079 0.01094 0.389 -250 103658 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MIEYDPERR [K].mIEYDPERR.[L] N-Term(TMT6plex) 5 Q3TI79 PUA domain-containing protein OS=Mus musculus OX=10090 GN=Dkc1 PE=2 SV=1 Q3TI79; Q3TM67; F6S1S5; B7ZCL7; Q9ESX5 PUA domain-containing protein OS=Mus musculus OX=10090 GN=Dkc1 PE=2 SV=1; PUA domain-containing protein OS=Mus musculus OX=10090 GN=Dkc1 PE=2 SV=1; H/ACA ribonucleoprotein complex subunit DKC1 (Fragment) OS=Mus musculus OX=10090 GN=Dkc1 PE=1 SV=1; H/ACA ribonucleoprotein complex subunit DKC1 (Fragment) OS=Mus musculus OX=10090 GN=Dkc1 PE=1 SV=1; H/ACA ribonucleoprotein complex subunit DKC1 OS=Mus musculus OX=10090 GN=Dkc1 PE=1 SV=4 1 3 3 0.3873 0 1 1 1 479.91684 1437.73597 1437.73576 0.14 0.00007 0/0 0 0 8878821 HCD 30 MS2 64.23997 1107.7 89.915 70.3606 21243 21243 21235 QEplus033719.raw F4 1134.6 853.2 1125.9 838.8 1316.2 1377.7 202 2.84 1 FALSE 0.001343 0.01887 0.291 -250 103678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HPALFK [R].hPALFk.[A] N-Term(TMT6plex); K6(TMT6plex) 2 Q01853 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4 Q01853; Q8BNF8 Transitional endoplasmic reticulum ATPase OS=Mus musculus OX=10090 GN=Vcp PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vcp PE=2 SV=1 0 3 3 0.3874 0 1 1 1 390.91885 1170.74201 1170.73994 1.77 0.00069 0/0 0 0 38891796 HCD 30 MS2 26.42517 552.6 24.321 70.3729 21247 21247 21246 QEplus033719.raw F4 538.3 332.4 558.2 703.2 426 757.7 154 3.02 1 FALSE 0.001142 0.01521 0.33 -250 103685 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVPTPAKK [K].aAVPTPAkk.[A] N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex) 8 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; A0A087WRM5; Q8CE30; Q9CT46 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 1 4 4 0.3665 0 1 1 1 393.26346 1570.032 1570.02952 1.58 0.00062 0/0 0 0 3031646 HCD 30 MS2 73.14391 418.1 110 70.3755 21248 21248 21246 QEplus033719.raw F4 411.9 316.3 446.9 270.2 529.6 533.7 78 2.81 1 FALSE 0.001685 0.02782 0.228 -250 103704 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGDFCIR [K].dGDFcIR.[V] N-Term(TMT6plex); C5(Carbamidomethyl) 5 O08529 Calpain-2 catalytic subunit OS=Mus musculus OX=10090 GN=Capn2 PE=1 SV=4 Q3U3A8; Q8BPV9; Q8R486; O08529; Q3U8S5 Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1; Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1; M-calpain 80 kDa large subunit (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Calpain-2 catalytic subunit OS=Mus musculus OX=10090 GN=Capn2 PE=1 SV=4; Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1 0 2 2 0.6556 0 1 1 1 556.27429 1111.54131 1111.54036 0.85 0.00047 0/0 0 0 46073408 HCD 30 MS2 17.54571 1043.2 43.343 70.3822 21251 21251 21246 QEplus033719.raw F4 1047.7 839.4 1115.5 748.4 1399 1109.3 71 2.41 1 FALSE 0.001624 0.02643 0.236 -250 103705 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGDFCLR [K].dGDFcLR.[V] N-Term(TMT6plex); C5(Carbamidomethyl) 3 Q91VA3; A0A0A6YVU9; A0A0R4J0K6 Calpain-8 OS=Mus musculus OX=10090 GN=Capn8 PE=1 SV=1; Calpain-8 OS=Mus musculus OX=10090 GN=Capn8 PE=1 SV=1; Calpain-8 OS=Mus musculus OX=10090 GN=Capn8 PE=1 SV=1 0 2 2 0.6556 0 1 2 2 556.27429 1111.54131 1111.54036 0.85 0.00047 0/0 0 0 46073408 HCD 30 MS2 17.54571 1043.2 43.343 70.3822 21251 21251 21246 QEplus033719.raw F4 1047.7 839.4 1115.5 748.4 1399 1109.3 71 2.41 1 FALSE 0.001624 0.02643 0.236 -250 103722 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRDVILKK [K].gRDVILkk.[D] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 9 E9QB01; A0A0A6YY47 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2;Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 E9QB01; P13595-3; P13595-2; A0A0A6YWU2; P13595-4; A0A0A6YY91; A0A0A6YY47; P13595; E9Q589 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2; Isoform 3 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Isoform 2 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Isoform 4 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 (Fragment) OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=3; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 2 4 4 0.3724 0 1 1 1 404.7764 1616.08376 1616.08262 0.7 0.00028 0/0 0 0 33532620 HCD 30 MS2 34.99707 926.7 38.909 70.3867 21253 21253 21246 QEplus033719.raw F4 1091.7 523 999.1 960.7 713.4 1272.4 123 1.96 2 FALSE 0.008887 0.1587 -0.097 -250 103728 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGEDMMHPLK [R].rGEDMMHPLk.[V] N-Term(TMT6plex); K10(TMT6plex) 2 Q3TFF0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja2 PE=2 SV=1 Q3TFF0; Q9QYJ0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja2 PE=2 SV=1; DnaJ homolog subfamily A member 2 OS=Mus musculus OX=10090 GN=Dnaja2 PE=1 SV=1 1 4 4 0.6325 0 1 1 1 418.73254 1671.90835 1671.90749 0.51 0.00021 0/0 0 0 26236994 HCD 30 MS2 47.92218 732.6 47.696 70.389 21254 21254 21246 QEplus033719.raw F4 766.1 482.7 808.3 516.3 714.5 1107.9 353 3.32 1 FALSE 0.001074 0.01375 0.349 -250 103731 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQEELVQQVR [R].kQEELVQQVR.[K] N-Term(TMT6plex); K1(TMT6plex) 5 F6WZH1 Methyl-CpG-binding domain protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Mbd3 PE=1 SV=1 Q9Z2D8-2; F6WZH1; D3YTR4; D3YTR5; Q9Z2D8 Isoform 2 of Methyl-CpG-binding domain protein 3 OS=Mus musculus OX=10090 GN=Mbd3; Methyl-CpG-binding domain protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Mbd3 PE=1 SV=1; Methyl-CpG-binding domain protein 3 OS=Mus musculus OX=10090 GN=Mbd3 PE=1 SV=1; Methyl-CpG-binding domain protein 3 OS=Mus musculus OX=10090 GN=Mbd3 PE=1 SV=1; Methyl-CpG-binding domain protein 3 OS=Mus musculus OX=10090 GN=Mbd3 PE=1 SV=1 1 3 3 0.6894 0 1 1 1 572.3454 1715.02164 1715.02159 0.03 0.00002 0/0 0 0 18083324 HCD 30 MS2 22.14559 1124.8 110 70.3915 21255 21255 21246 QEplus033719.raw F4 1110.5 1068.6 1246.5 838.1 1339.3 1146.1 344 3.67 1 FALSE 1.14E-05 2.18E-07 1.363 -250 103757 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTANDMIHAENMR [K].kTANDMIHAENMR.[L] N-Term(TMT6plex); K1(TMT6plex) 3 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q3UF33; Q3TZQ2 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; ERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 1 4 4 0.7975 0 1 1 1 498.01581 1989.0414 1989.04102 0.19 0.0001 0/0 0 0 60118568 HCD 30 MS2 36.91936 960.8 22.114 70.4081 21261 21261 21257 QEplus033719.raw F4 945.2 890.7 1012.9 876.8 1200.5 838.6 329 4 1 FALSE 1.14E-05 3.16E-08 1.522 -250 103764 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HNCFQECLK [K].hNcFQEcLk.[Q] N-Term(TMT6plex); C3(Carbamidomethyl); C7(Carbamidomethyl); K9(TMT6plex) 3 Q8BU30 "Isoleucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Iars1 PE=1 SV=2" Q3UWS7; E9Q866; Q8BU30 "Isoleucyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Iars PE=2 SV=1; Isoleucine-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Iars PE=1 SV=1; Isoleucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Iars1 PE=1 SV=2" 0 3 3 0.7674 0 1 1 1 565.29095 1693.85831 1693.85545 1.69 0.00095 0/0 0 0 31526802 HCD 30 MS2 51.24117 813.5 39.316 70.4104 21262 21262 21257 QEplus033719.raw F4 826.9 647.4 898.3 709.1 834 965.4 229 3.87 1 FALSE 1.14E-05 7.62E-06 1.07 -250 103769 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHLLGSTAEEK [K].eHLLGSTAEEk.[A] N-Term(TMT6plex); K11(TMT6plex) 1 Q9D1M4 Eukaryotic translation elongation factor 1 epsilon-1 OS=Mus musculus OX=10090 GN=Eef1e1 PE=1 SV=1 Q9D1M4 Eukaryotic translation elongation factor 1 epsilon-1 OS=Mus musculus OX=10090 GN=Eef1e1 PE=1 SV=1 0 3 3 0.646 0 1 1 1 557.98273 1671.93363 1671.93177 1.11 0.00062 0/0 0 0 19216858 HCD 30 MS2 46.00016 1207.1 66.193 70.4126 21263 21263 21257 QEplus033719.raw F4 1262.8 964.9 1286.1 955.8 1429.7 1343.3 390 4.52 1 FALSE 1.14E-05 1.47E-06 1.205 -250 103785 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAAFEDEAK [K].sAAFEDEAk.[Y] N-Term(TMT6plex); K9(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; Q3TZL3; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.4723 0 1 1 1 713.38428 1425.76128 1425.76258 -0.91 -0.00065 0/0 0 0 6939284 HCD 30 MS2 11.82416 769.6 110 70.4199 21266 21266 21257 QEplus033719.raw F4 881.2 375.4 702.2 1119.4 467.2 1072.2 248 3.43 2 FALSE 1.14E-05 6.27E-05 0.896 -250 103792 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYDAVAEK [K].eYDAVAEk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 E9Q2X6 Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1 E9Q2X6; Q8CG47; Q6P7V9 Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1; Structural maintenance of chromosomes protein 4 OS=Mus musculus OX=10090 GN=Smc4 PE=1 SV=1; Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc4 PE=2 SV=1 0 2 2 0.5052 0 1 1 1 691.88287 1382.75847 1382.75677 1.23 0.00085 0/0 0 0 6544013.5 HCD 30 MS2 36.24122 546.6 110 70.4224 21267 21267 21257 QEplus033719.raw F4 516.6 588.9 518 344.9 870.1 441.3 316 2.91 1 FALSE 1.14E-05 0.0001264 0.838 -250 103798 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVPTPAKK [K].aAVPTPAkk.[A] N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex) 8 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; A0A087WRM5; Q8CE30; Q9CT46 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 1 3 3 0.5775 0 1 1 1 524.0152 1570.03104 1570.02952 0.97 0.00051 0/0 0 0 69413224 HCD 30 MS2 12.4453 1123.4 27.342 70.4297 21269 21269 21268 QEplus033719.raw F4 1118.5 990.6 1127.9 765.7 1552.5 1185 91 3.29 1 FALSE 1.14E-05 0.0003332 0.757 -250 103824 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HNIICLQNDHK [R].hNIIcLQNDHk.[A] N-Term(TMT6plex); C5(Carbamidomethyl); K11(TMT6plex) 5 Q3THC1 26S proteasome non-ATPase regulatory subunit 9 OS=Mus musculus OX=10090 GN=Psmd9 PE=2 SV=1 Q3THC1; Q9CR00; A0A0G2JGN6; Q3ULI3; Q9CZZ4 26S proteasome non-ATPase regulatory subunit 9 OS=Mus musculus OX=10090 GN=Psmd9 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 9 OS=Mus musculus OX=10090 GN=Psmd9 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 9 (Fragment) OS=Mus musculus OX=10090 GN=Psmd9 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Psmd9 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 9 OS=Mus musculus OX=10090 GN=Psmd9 PE=2 SV=1 0 4 4 0.6125 0 1 1 1 463.25858 1850.01247 1850.01071 0.95 0.00044 0/0 0 0 13711591 HCD 30 MS2 13.98698 823.7 110 70.439 21273 21273 21268 QEplus033719.raw F4 859.1 669.9 892.3 656.9 880.2 983.7 467 4.31 1 FALSE 1.14E-05 1.15E-06 1.226 -250 103834 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYSFTTTAER [-R].gYSFTTTAER.[E] N-Term(TMT6plex) 22 O89054; Q3UAF6 Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q6IWE2; Q3UCF8; Q3TSB7; Q9QZ83; O89054; Q3UAF6; Q3UD81; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; G3UZ07; Q3TIJ9; Q61276; Q3UBP6; E9Q5F4; Q3UBQ4; P63260; Q3U939; Q3UGS0; Q3U804 "Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 0 2 2 0.7256 0 1 1 1 681.34998 1361.69267 1361.68986 2.07 0.00141 0/0 0 0 11796460 HCD 30 MS2 14.94669 841.2 110 70.4415 21274 21274 21268 QEplus033719.raw F4 769.5 863.3 919.3 601.8 1098.3 795.2 165 4.41 2 FALSE 1.14E-05 6.41E-07 1.274 -250 103843 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQVAPMDDETGK [R].qQVAPMDDETGk.[E] N-Term(TMT6plex); K12(TMT6plex) 10 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; B2RXX6; A3KGU9; Q3V1V5; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.6878 0 1 1 1 888.9657 1776.92412 1776.92022 2.19 0.00195 0/0 0 0 9101172 HCD 30 MS2 0 480.2 110 70.444 21275 21275 21268 QEplus033719.raw F4 491 391.6 595.5 396.3 480.2 526.6 284 4.1 2 FALSE 1.14E-05 3.35E-11 2.087 -250 103876 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLYDESCSK [K].tLYDEScSk.[E] N-Term(TMT6plex); C7(Carbamidomethyl); K9(TMT6plex) 2 Q9EST4 Proteasome assembly chaperone 2 OS=Mus musculus OX=10090 GN=Psmg2 PE=1 SV=1 Q9EST4-3; Q9EST4 Isoform 3 of Proteasome assembly chaperone 2 OS=Mus musculus OX=10090 GN=Psmg2; Proteasome assembly chaperone 2 OS=Mus musculus OX=10090 GN=Psmg2 PE=1 SV=1 0 2 2 0.582 0 1 1 1 780.90265 1560.79802 1560.79798 0.03 0.00002 0/0 0 0 3971595.5 HCD 30 MS2 23.41387 331.3 110 70.4588 21280 21280 21279 QEplus033719.raw F4 299.9 319.4 377.1 275.2 364.5 351.6 205 3.66 1 FALSE 1.14E-05 9.14E-07 1.245 -250 103890 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITESEEVVSR [R].iTESEEVVSR.[E] N-Term(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 D3YUF7; P48678; P48678-2 Prelamin-A/C (Fragment) OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=1; Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 0 2 2 0.6246 0 1 1 1 689.37531 1377.74333 1377.74229 0.76 0.00052 0/0 0 0 93973640 HCD 30 MS2 26.43475 679.2 23.643 70.4634 21282 21282 21279 QEplus033719.raw F4 724.6 625.4 744.4 517.3 807 656.3 311 3.25 1 FALSE 1.14E-05 1.19E-06 1.223 -250 103900 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLSLSTSK [K].rLSLSTSk.[L] N-Term(TMT6plex); K8(TMT6plex) 5 Q3TWN8 Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1 Q3TWN8; Q3UZ27; Q9Z110; Q9Z110-2; Q3UGW8 Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1; Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1 PE=1 SV=2; Isoform Short of Delta-1-pyrroline-5-carboxylate synthase OS=Mus musculus OX=10090 GN=Aldh18a1; Gamma-glutamyl kinase (Fragment) OS=Mus musculus OX=10090 GN=Aldh18a1 PE=2 SV=1 1 3 3 0.6328 0 1 1 1 450.62262 1349.85331 1349.85167 1.21 0.00055 0/0 0 0 79441944 HCD 30 MS2 44.11501 716.7 18.543 70.4656 21283 21283 21279 QEplus033719.raw F4 765 563.2 783.1 594.8 805.7 788.2 128 3.84 1 FALSE 5.44E-05 0.002628 0.572 -250 103941 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MPSGEFAR [K].mPSGEFAR.[I] N-Term(TMT6plex) 2 P17918 Proliferating cell nuclear antigen OS=Mus musculus OX=10090 GN=Pcna PE=1 SV=2 P17918; Q91ZH2 Proliferating cell nuclear antigen OS=Mus musculus OX=10090 GN=Pcna PE=1 SV=2; Proliferating cell nuclear antigen OS=Mus musculus OX=10090 GN=Pcna PE=2 SV=1 0 2 2 0.3952 0 1 1 1 562.2923 1123.57732 1123.57675 0.51 0.00029 0/0 0 0 24940056 HCD 30 MS2 40.70461 1014.1 42.268 70.4769 21288 21288 21279 QEplus033719.raw F4 1049.9 927.7 878.8 820.9 1464.2 943.1 117 2.48 1 FALSE 0.0001504 0.00345 0.543 -250 103957 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFKDPNAPK [K].kFkDPNAPk.[R] N-Term(TMT6plex); K1(TMT6plex); K3(TMT6plex); K9(TMT6plex) 12 Q8BNM0 High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 Q8BQ02; Q8BNM0; Q6P202; Q58EV5; Q80YZ1; Q3UJK0; Q8C7C4; D3YZ18; Q3UBK2; A0A0J9YUZ4; A0A0J9YUD8; Q497Z6 High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=bM168F16.1 PE=3 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=8; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein B1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 2 3 3 0.5508 0 1 1 1 654.41705 1961.23661 1961.23538 0.62 0.00041 0/0 0 0 8263320 HCD 30 MS2 13.75959 658.8 110 70.4865 21291 21291 21290 QEplus033719.raw F4 610 791.4 704.5 429.6 864.2 552.9 190 2.56 1 FALSE 1.14E-05 0.0005006 0.722 -250 103964 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYVHYK [K].vYVHYk.[G] N-Term(TMT6plex); K6(TMT6plex) 4 Q64378 Peptidyl-prolyl cis-trans isomerase FKBP5 OS=Mus musculus OX=10090 GN=Fkbp5 PE=1 SV=1 B8JJC2; A0A3B2WCL4; Q64378; Q3TX72 Peptidylprolyl isomerase (Fragment) OS=Mus musculus OX=10090 GN=Fkbp5 PE=1 SV=1; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp5 PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase FKBP5 OS=Mus musculus OX=10090 GN=Fkbp5 PE=1 SV=1; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp5 PE=2 SV=1 0 3 3 0.2329 0 1 1 1 422.9256 1266.76224 1266.76106 0.93 0.00039 0/0 0 0 13377098 HCD 30 MS2 32.30472 671.9 73.175 70.4887 21292 21292 21290 QEplus033719.raw F4 608.3 621.3 741.3 511.4 752.4 796.5 219 2.49 1 FALSE 0.005357 0.09157 0.03 -250 103984 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLEQTVK [K].nLEQTVk.[D] N-Term(TMT6plex); K7(TMT6plex) 8 Q5SX40; P13541 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 Q9ESW6; Q5SX40; P13541; B2RWX0; Q3UW38; B1AR69; M0QWL0; Q3TT35 "Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin_tail_1 domain-containing protein OS=Mus musculus OX=10090 GN=Myh13 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin, heavy polypeptide 13, skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Myh13 PE=4 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1" 0 2 2 0.419 0 1 1 1 645.39594 1289.78459 1289.78292 1.3 0.00084 0/0 0 0 106057216 HCD 30 MS2 11.8464 1385.2 17.591 70.4955 21295 21295 21290 QEplus033719.raw F4 1779.4 406.5 1065.3 2456.9 459.5 2143.3 485 3.27 2 FALSE 0.00079 0.01107 0.387 -250 103994 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVTAAMGK [R-].kVTAAMGk.[K] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 2 P61358 60S ribosomal protein L27 OS=Mus musculus OX=10090 GN=Rpl27 PE=1 SV=2 P61358; Q9CSM4 60S ribosomal protein L27 OS=Mus musculus OX=10090 GN=Rpl27 PE=1 SV=2; 60S ribosomal protein L27 (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 1 3 3 0.6524 0 1 1 1 498.3212 1492.94904 1492.94883 0.14 0.00007 0/0 0 0 97388880 HCD 30 MS2 52.09665 1043.4 12.78 70.4978 21296 21296 21290 QEplus033719.raw F4 976.4 1057 1159.9 995.4 1308.1 763.8 212 3.97 1 FALSE 1.14E-05 6.83E-06 1.079 -250 104003 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFKDPNAPK [K].kFkDPNAPk.[R] N-Term(TMT6plex); K1(TMT6plex); K3(TMT6plex); K9(TMT6plex) 12 Q8BNM0 High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 Q8BQ02; Q8BNM0; Q6P202; Q58EV5; Q80YZ1; Q3UJK0; Q8C7C4; D3YZ18; Q3UBK2; A0A0J9YUZ4; A0A0J9YUD8; Q497Z6 High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=bM168F16.1 PE=3 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=8; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein B1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 2 4 4 0.4776 0 1 1 1 491.06519 1961.23891 1961.23538 1.8 0.00088 0/0 0 0 62189304 HCD 30 MS2 13.142 861.8 16.238 70.5 21297 21297 21290 QEplus033719.raw F4 792.2 1107.4 881.4 528.2 1192.5 669.3 195 2.68 1 FALSE 0.007252 0.1157 -0.033 -250 104010 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MAPSVEK [K].mAPSVEk.[K] N-Term(TMT6plex); K7(TMT6plex) 1 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 2 2 0.4224 0 1 1 1 610.36462 1219.72197 1219.71207 8.12 0.00495 0/0 0 0 46016336 HCD 30 MS2 23.28497 916.9 19.311 70.5023 21298 21298 21290 QEplus033719.raw F4 854.3 755.3 1052.4 845.1 926.5 1067.8 440 2.32 1 FALSE 0.0006383 0.009835 0.407 -250 104030 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASASDGSSFVVAR [K].aSASDGSSFVVAR.[Y] N-Term(TMT6plex) 2 Q9CYL5 Golgi-associated plant pathogenesis-related protein 1 OS=Mus musculus OX=10090 GN=Glipr2 PE=1 SV=3 B1AWD6; Q9CYL5 Golgi-associated plant pathogenesis-related protein 1 OS=Mus musculus OX=10090 GN=Glipr2 PE=1 SV=1; Golgi-associated plant pathogenesis-related protein 1 OS=Mus musculus OX=10090 GN=Glipr2 PE=1 SV=3 0 2 2 0.6048 0 1 1 1 741.89233 1482.77739 1482.77499 1.62 0.0012 0/0 0 0 24488916 HCD 30 MS2 53.26919 609.4 57.213 70.5068 21300 21300 21290 QEplus033719.raw F4 570.5 588.7 696 433.8 768.9 598.6 260 3.77 1 FALSE 1.14E-05 2.34E-10 1.927 -250 104063 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQHLAEK [R].lQHLAEk.[F] N-Term(TMT6plex); K7(TMT6plex) 1 O88990 Alpha-actinin-3 OS=Mus musculus OX=10090 GN=Actn3 PE=2 SV=1 O88990 Alpha-actinin-3 OS=Mus musculus OX=10090 GN=Actn3 PE=2 SV=1 0 3 3 0.5376 0 1 1 1 432.94009 1296.80573 1296.80399 1.34 0.00058 0/0 0 0 66322320 HCD 30 MS2 33.12238 599.1 15.884 70.5209 21305 21305 21301 QEplus033719.raw F4 605.1 284.5 678.6 649.8 393.9 982.7 162 3.46 1 FALSE 3.35E-05 0.001213 0.645 -250 104082 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQEYLEVQR [K].kQEYLEVQR.[Q] N-Term(TMT6plex); K1(TMT6plex) 4 Q99LI8 Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=2 Q99LI8; Q3UMA3; Q3TLL4; F6VV02 Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=2; Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=1; Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus OX=10090 GN=Hgs PE=2 SV=1; Hepatocyte growth factor-regulated tyrosine kinase substrate (Fragment) OS=Mus musculus OX=10090 GN=Hgs PE=1 SV=2 1 3 3 0.4908 0 1 1 1 550.99127 1650.95926 1650.95793 0.81 0.00045 0/0 0 0 22327658 HCD 30 MS2 35.51684 1498.9 69.882 70.5254 21307 21307 21301 QEplus033719.raw F4 1351.3 1241 1645.7 1386.5 1669.3 1699.5 461 2.73 1 FALSE 1.14E-05 0.0001215 0.841 -250 104091 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVEAMSGMEGR [K].nVEAMSGMEGR.[K] N-Term(TMT6plex) 3 F6QC77 "Troponin I, slow skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1" F6QC77; Q9WUZ5; D3YUN3 "Troponin I, slow skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1; Troponin I, slow skeletal muscle OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=3; Troponin I, slow skeletal muscle OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1" 0 2 2 0.7727 0 1 1 1 705.34015 1409.67302 1409.67145 1.11 0.00079 0/0 0 0 19930140 HCD 30 MS2 39.7704 1221.2 110 70.528 21308 21308 21301 QEplus033719.raw F4 1336 551.3 1513.3 1444.9 585.6 1896 77 4.18 1 FALSE 1.14E-05 8.21E-09 1.633 -250 104097 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FARPDFR [R].fARPDFR.[D] N-Term(TMT6plex) 1 Q8R5J9 PRA1 family protein 3 OS=Mus musculus OX=10090 GN=Arl6ip5 PE=1 SV=2 Q8R5J9 PRA1 family protein 3 OS=Mus musculus OX=10090 GN=Arl6ip5 PE=1 SV=2 0 3 3 0.3493 0 1 1 1 379.88416 1137.63791 1137.63664 1.12 0.00042 0/0 0 0 19738664 HCD 30 MS2 68.24686 659.4 33.282 70.5302 21309 21309 21301 QEplus033719.raw F4 451.9 431.7 898.8 533.5 424.2 1216.1 222 2.29 1 FALSE 0.007337 0.1177 -0.037 -250 104104 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FLRPHYGK [K].fLRPHYGk.[L] N-Term(TMT6plex); K8(TMT6plex) 7 Q3TWL6 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1 Q3TI61; Q3TWL6; Q3TW71; Q3U9Y8; Q3TIP0; Q8VDM4; Q3TXV1 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1 0 4 4 0.5571 0 1 1 1 369.72812 1475.89065 1475.88872 1.3 0.00048 0/0 0 0 14695497 HCD 30 MS2 41.57071 503.8 47.03 70.5324 21310 21310 21301 QEplus033719.raw F4 505.3 381.2 646.6 424.8 407.7 657.5 473 2.89 1 FALSE 0.00079 0.01105 0.388 -250 104122 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQVANSAFVER [K].dQVANSAFVER.[L] N-Term(TMT6plex) 8 P07901 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4 Q3TKB9; P07901; Q3TJU7; Q3TKA2; Q3UIF3; A0PJ91; Q3TKG0; Q8C5U3 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 0 2 2 0.6889 0 1 1 1 732.88629 1464.76531 1464.76442 0.6 0.00044 0/0 0 0 51529960 HCD 30 MS2 17.81736 651.6 47.161 70.5423 21313 21313 21312 QEplus033719.raw F4 671.1 650.1 727.9 446.4 796.4 617.4 290 3.89 1 FALSE 1.14E-05 1.98E-09 1.751 -250 104130 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VASHAPSLLR [K].vASHAPSLLR.[D] N-Term(TMT6plex) 1 P70444 BH3-interacting domain death agonist OS=Mus musculus OX=10090 GN=Bid PE=1 SV=2 P70444 BH3-interacting domain death agonist OS=Mus musculus OX=10090 GN=Bid PE=1 SV=2 0 3 3 0.6083 0 1 1 1 427.26144 1279.76978 1279.76839 1.09 0.00046 0/0 0 0 8556425 HCD 30 MS2 48.13601 411.9 110 70.5448 21314 21314 21312 QEplus033719.raw F4 455.5 269.3 385.6 375.2 453 532.5 377 3.6 1 FALSE 1.14E-05 9.68E-07 1.24 -250 104142 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIGVAAK [R].tIGVAAk.[N] N-Term(TMT6plex); K7(TMT6plex) 4 Q61699 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2 E9Q0U7; Q61699; D3Z027; Q61699-2 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=1; Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2; Heat shock protein 105 kDa (Fragment) OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=1; Isoform HSP105-beta of Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 0 2 2 0.2406 0 1 1 1 559.37134 1117.7354 1117.73452 0.79 0.00044 0/0 0 0 42468068 HCD 30 MS2 16.12702 761.8 29.292 70.5493 21316 21316 21312 QEplus033719.raw F4 789.2 528.2 851.1 681.1 776.7 944.5 179 2.66 1 FALSE 0.0003996 0.007038 0.457 -250 104152 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MAPSVEK [K].mAPSVEk.[K] N-Term(TMT6plex); K7(TMT6plex) 1 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 2 2 0.4316 0 1 1 1 610.36017 1219.71306 1219.71207 0.82 0.0005 0/0 0 0 39644852 HCD 30 MS2 33.55813 822.6 20.562 70.5516 21317 21317 21312 QEplus033719.raw F4 760 678.6 936.1 749.2 844.5 967.1 468 2.34 1 FALSE 0.0008183 0.01129 0.384 -250 104162 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLEQTVK [K].nLEQTVk.[D] N-Term(TMT6plex); K7(TMT6plex) 8 Q5SX40; P13541 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 Q9ESW6; Q5SX40; P13541; B2RWX0; Q3UW38; B1AR69; M0QWL0; Q3TT35 "Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin_tail_1 domain-containing protein OS=Mus musculus OX=10090 GN=Myh13 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin, heavy polypeptide 13, skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Myh13 PE=4 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1" 0 3 3 0.3517 0 1 1 1 430.59979 1289.78482 1289.78292 1.47 0.00063 0/0 0 0 34629092 HCD 30 MS2 5.810167 506.9 26.482 70.5538 21318 21318 21312 QEplus033719.raw F4 676.2 115.7 384.4 924 149.2 792 485 2.9 2 FALSE 0.002586 0.05104 0.139 -250 104172 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVIGLQMGSNR [K].hVIGLQMGSNR.[G] N-Term(TMT6plex) 1 P37804 Transgelin OS=Mus musculus OX=10090 GN=Tagln PE=1 SV=3 P37804 Transgelin OS=Mus musculus OX=10090 GN=Tagln PE=1 SV=3 0 3 3 0.7917 0 1 1 1 480.93661 1440.79529 1440.79428 0.7 0.00034 0/0 0 0 28248566 HCD 30 MS2 11.73663 376.5 41.986 70.5561 21319 21319 21312 QEplus033719.raw F4 399.2 272.2 375.5 270.4 564.2 377.2 270 4.08 1 FALSE 1.14E-05 9.00E-08 1.436 -250 104181 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGDDIAK [K].vGDDIAk.[A] N-Term(TMT6plex); K7(TMT6plex) 4 Q5BLK0; Q8C2K0 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=1 SV=1;60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1 Q6DI58; Q3TIQ2; Q5BLK0; Q8C2K0 Rpl12 protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1; 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1; 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=1 SV=1; 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1 0 2 2 0.4492 0 1 1 1 588.3559 1175.70452 1175.70361 0.77 0.00045 0/0 0 0 18435966 HCD 30 MS2 16.91375 1628.4 110 70.5586 21320 21320 21312 QEplus033719.raw F4 1767.6 1310 1739.5 1301.1 1852.7 1799.5 516 2.56 2 FALSE 0.0003496 0.006889 0.46 -250 104187 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEEDEILNR [K].aEEDEILNR.[S] N-Term(TMT6plex) 2 Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 Q3TXE5; Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 0 2 2 0.5649 0 1 1 1 659.3457 1317.68413 1317.68478 -0.49 -0.00032 0/0 0 0 15567931 HCD 30 MS2 55.44237 1088.3 73.896 70.5609 21321 21321 21312 QEplus033719.raw F4 1013.7 886.4 1167.6 1020.3 1221.7 1220 212 3.08 1 FALSE 1.14E-05 6.08E-06 1.089 -250 104217 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALELEQER [KR].aLELEQER.[QK] N-Term(TMT6plex) 8 P26043; P26041 Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3;Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26043; Q3TH46; P26041; Q3U111; Q05DU4; A0A5F8MPB9; Q3UJJ8; Q3TZQ2 Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 0 2 2 0.2251 0 1 1 1 608.84106 1216.67485 1216.67348 1.13 0.00068 0/0 0 0 44384856 HCD 30 MS2 3.507668 697.5 29.207 70.5749 21326 21326 21323 QEplus033719.raw F4 711.1 748.4 729.1 590.4 785.5 620.2 348 3.42 2 FALSE 1.14E-05 0.0001066 0.852 -250 104224 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MLGVQRPK [R].mLGVQRPk.[S] N-Term(TMT6plex); K8(TMT6plex) 3 Q7TPV4 Myb-binding protein 1A OS=Mus musculus OX=10090 GN=Mybbp1a PE=1 SV=2 A0JLT5; Q3TLF6; Q7TPV4 Mybbp1a protein (Fragment) OS=Mus musculus OX=10090 GN=Mybbp1a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mybbp1a PE=2 SV=1; Myb-binding protein 1A OS=Mus musculus OX=10090 GN=Mybbp1a PE=1 SV=2 0 3 3 0.461 0 1 1 1 462.96033 1386.86643 1386.86555 0.64 0.00029 0/0 0 0 43768024 HCD 30 MS2 22.54985 777.6 21.73 70.5772 21327 21327 21323 QEplus033719.raw F4 756.2 683.1 888.6 542.7 925.4 869.8 319 2.95 1 FALSE 0.0006966 0.01008 0.403 -250 104231 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIENVLRR [K].qIENVLRR.[Y] N-Term(TMT6plex) 1 Q99L45 Eukaryotic translation initiation factor 2 subunit 2 OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1 Q99L45 Eukaryotic translation initiation factor 2 subunit 2 OS=Mus musculus OX=10090 GN=Eif2s2 PE=1 SV=1 1 3 3 0.4694 0 1 1 1 419.59308 1256.76468 1256.76363 0.83 0.00035 0/0 0 0 16644427 HCD 30 MS2 32.63168 636.7 66.416 70.5817 21329 21329 21323 QEplus033719.raw F4 658.8 499.4 692.4 446.3 768.8 754.6 286 3.43 1 FALSE 1.14E-05 0.000736 0.689 -250 104251 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CYLEQK [K].cYLEQk.[A] N-Term(TMT6plex); C1(Carbamidomethyl); K6(TMT6plex) 1 Q8K0C4 Lanosterol 14-alpha demethylase OS=Mus musculus OX=10090 GN=Cyp51a1 PE=1 SV=1 Q8K0C4 Lanosterol 14-alpha demethylase OS=Mus musculus OX=10090 GN=Cyp51a1 PE=1 SV=1 0 2 2 0.0558 0 1 1 1 649.86261 1298.71794 1298.71788 0.05 0.00003 0/0 0 0 13697803 HCD 30 MS2 32.96954 1219.4 110 70.5865 21331 21331 21323 QEplus033719.raw F4 1174.3 980.7 1394.8 1063.3 1158.6 1544.7 309 2.51 1 FALSE 0.003608 0.06906 0.09 -250 104267 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLASTSDIEEK [R].rLASTSDIEEk.[E] N-Term(TMT6plex); K11(TMT6plex) 3 Q9DBR7 Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2 Q9DBR7; A0A1W2P750; Q9DBR7-2 Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=2; Protein phosphatase 1 regulatory subunit 12A (Fragment) OS=Mus musculus OX=10090 GN=Ppp1r12a PE=1 SV=1; Isoform 2 of Protein phosphatase 1 regulatory subunit 12A OS=Mus musculus OX=10090 GN=Ppp1r12a 1 3 3 0.3527 0 1 1 1 569.66229 1706.97232 1706.96888 2.01 0.00115 0/0 0 0 8608363 HCD 30 MS2 62.47409 1026.1 80.673 70.5985 21335 21335 21334 QEplus033719.raw F4 1052.2 817.2 1117.9 896.1 1036.1 1236.9 476 2.75 1 FALSE 0.0001813 0.003988 0.528 -250 104273 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YEEEIK [K].yEEEIk.[VLI] N-Term(TMT6plex); K6(TMT6plex) 35 E9Q456; G5E8R2; G5E8R1; P58774; Q8C7C3; A2AIM4; Q58E70; P58774-2; E9Q5J9; A0A0R4J1P2; E9Q450; Q6IRU2 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 E9Q456; Q9D1R6; E9Q455; G5E8R2; E9Q453; G5E8R1; Q8BSH3; A0A571BEU1; D3Z6I8; E9Q452; P58774; F8WID5; Q8C7C3; A2AIM4; Q3TJ53; Q58E70; D3Z2H9; Q3SX28; P58774-2; E9Q454; Q61344; E9Q5J9; A0A0R4J1P2; E9Q448; P21107; E9Q450; Q8K0Z5; G5E8R0; Q564G1; B7ZNL3; Q8BP43; Q6IRU2; E9Q7Q3; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin 3, related sequence 7 OS=Mus musculus OX=10090 GN=Tpm3-rs7 PE=3 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=3; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 3, gamma OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 0 2 2 0.4346 0 1 1 1 634.86102 1268.71477 1268.71384 0.73 0.00046 0/0 0 0 15640675 HCD 30 MS2 5.860182 1347.6 110 70.601 21336 21336 21334 QEplus033719.raw F4 1507.8 874 1376 1255.9 1375.5 1696.2 302 2.37 12 TRUE 0.004072 0.07517 0.074 -250 104276 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSGEYEK [K].lSGEYEk.[F] N-Term(TMT6plex); K7(TMT6plex) 4 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 0 2 2 0.1051 0 1 1 1 642.36658 1283.72588 1283.72474 0.89 0.00057 0/0 0 0 41612612 HCD 30 MS2 9.870677 1147.3 45.194 70.6078 21339 21339 21334 QEplus033719.raw F4 1230.6 956.3 1250.9 1021.6 1204.9 1219.5 288 3.14 1 FALSE 0.001368 0.01958 0.285 -250 104286 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAWDAGK [K].eAWDAGk.[F] N-Term(TMT6plex); K7(TMT6plex) 2 Q3TQP7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Acat1 PE=2 SV=1 Q3TQP7; Q8QZT1 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Acat1 PE=2 SV=1; Acetyl-CoA acetyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Acat1 PE=1 SV=1" 0 2 2 0.3919 0 1 1 1 617.84656 1234.68584 1234.68321 2.13 0.00132 0/0 0 0 32773440 HCD 30 MS2 36.70442 1141.1 33.784 70.6101 21340 21340 21334 QEplus033719.raw F4 1311.5 915 1191.8 1097.3 1101.7 1229.4 343 2.73 1 FALSE 0.0002518 0.005107 0.499 -250 104302 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMAALDAADR [R].nMAALDAADR.[A] N-Term(TMT6plex) 2 A0A0U1RP13 CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Mus musculus OX=10090 GN=Cdipt PE=1 SV=1 A0A0U1RP13; Q8VDP6 CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Mus musculus OX=10090 GN=Cdipt PE=1 SV=1; CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Mus musculus OX=10090 GN=Cdipt PE=1 SV=1 0 2 2 0.0104 2 2 2 638.82642 1276.64556 1276.6517 -4.81 -0.00307 0/0 0 0 24784630 HCD 30 MS2 25.89516 1037 82.576 70.6146 21342 21342 21334 QEplus033719.raw F4 1061.8 975.2 1109.4 862.9 1121.8 1090.6 163 2.85 1 FALSE 3.35E-05 0.001198 0.646 -250 104306 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNTLTK [K].vNTLTk.[SA] N-Term(TMT6plex); K6(TMT6plex) 11 Q5SX40; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; Q5SX39; G3UW82; B2RWX0; B2RQQ1; I6L963; B2RY26; B2RXX9; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.1739 0 1 1 1 567.36859 1133.72991 1133.72943 0.42 0.00024 0/0 0 0 17721544 HCD 30 MS2 53.57364 1991.1 92.985 70.6169 21343 21343 21334 QEplus033719.raw F4 2514.2 841.8 1225.3 3771.4 1272.2 2321.5 153 2.07 4 FALSE 0.004014 0.07402 0.077 -250 104325 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MSTMTPK [R-].mSTMTPk.[I] N-Term(TMT6plex); K7(TMT6plex) 6 F6V6T4 Transmembrane emp24 domain-containing protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Tmed2 PE=1 SV=1 F6V6T4; Q8C1Z9; Q8BPI2; Q3THL1; Q9R0Q3; Q3U9H7 Transmembrane emp24 domain-containing protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Tmed2 PE=1 SV=1; GOLD domain-containing protein OS=Mus musculus OX=10090 GN=Tmed2 PE=2 SV=1; Transmembrane emp24 domain-containing protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Tmed2 PE=1 SV=1; GOLD domain-containing protein OS=Mus musculus OX=10090 GN=Tmed2 PE=2 SV=1; Transmembrane emp24 domain-containing protein 2 OS=Mus musculus OX=10090 GN=Tmed2 PE=1 SV=1; GOLD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tmed2 PE=2 SV=1 0 2 2 0.4183 0 1 1 1 627.35419 1253.7011 1253.69979 1.05 0.00066 0/0 0 0 17540254 HCD 30 MS2 10.85952 1336 110 70.6267 21346 21346 21345 QEplus033719.raw F4 1289.7 1124.4 1457.1 1233.4 1402.6 1509 256 2.51 1 FALSE 0.0007816 0.01077 0.392 -250 104334 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FQGQCYK [K].fQGQcYk.[Y] N-Term(TMT6plex); C5(Carbamidomethyl); K7(TMT6plex) 8 G3XA35 Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1 E9QMK3; E9PYH0; G3XA35; Q62059; E9QMK2; Q62059-4; Q62059-2; Q62059-3 Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=2; Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=1; Isoform V3 of Versican core protein OS=Mus musculus OX=10090 GN=Vcan; Isoform V1 of Versican core protein OS=Mus musculus OX=10090 GN=Vcan; Isoform V2 of Versican core protein OS=Mus musculus OX=10090 GN=Vcan 0 2 2 0.6806 0 1 1 1 694.87384 1388.7404 1388.73968 0.52 0.00036 0/0 0 0 17719226 HCD 30 MS2 9.590196 1011.1 110 70.6292 21347 21347 21345 QEplus033719.raw F4 897.1 986.3 1210.2 953.5 971.5 1047.8 272 2.88 1 FALSE 0.001101 0.01424 0.342 -250 104342 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGHVAQIYAIR [K].gGGHVAQIYAIR.[Q] N-Term(TMT6plex) 3 Q641N3 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 Q641N3; P14131; Q5CZY9 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1; 40S ribosomal protein S16 OS=Mus musculus OX=10090 GN=Rps16 PE=1 SV=4; Rps16 protein OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 0 3 3 0.6487 0 1 1 1 490.95132 1470.83942 1470.83786 1.06 0.00052 0/0 0 0 105130128 HCD 30 MS2 36.01115 634.5 14.745 70.6315 21348 21348 21345 QEplus033719.raw F4 662.7 599.1 656.7 540.4 723.1 624.8 385 3.9 1 FALSE 1.14E-05 2.73E-05 0.964 -250 104345 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLEEAIR [K].tLEEAIR.[S] N-Term(TMT6plex) 2 P97384 Annexin A11 OS=Mus musculus OX=10090 GN=Anxa11 PE=1 SV=2 P97384; D3Z7U0 Annexin A11 OS=Mus musculus OX=10090 GN=Anxa11 PE=1 SV=2; Annexin OS=Mus musculus OX=10090 GN=Anxa11 PE=1 SV=1 0 2 2 0.1762 0 1 1 1 530.81464 1060.622 1060.61999 1.89 0.001 0/0 0 0 31032746 HCD 30 MS2 38.54132 907.3 35.054 70.6337 21349 21349 21345 QEplus033719.raw F4 1025.3 625.8 929.2 991.1 797.2 1075.4 244 2.27 1 FALSE 0.004288 0.07864 0.065 -250 104361 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MYEEHLK [K].mYEEHLk.[R] N-Term(TMT6plex); K7(TMT6plex) 7 G3UW85 Enhancer of rudimentary homolog OS=Mus musculus OX=10090 GN=Erh PE=1 SV=1 A0A1W2P7T3; A0A1W2P7H9; Q9D2S9; Q9D9P6; G3UW85; P84089; Q9DA82 Enhancer of rudimentary homolog OS=Mus musculus OX=10090 GN=Erh PE=1 SV=1; Enhancer of rudimentary homolog OS=Mus musculus OX=10090 GN=Erh PE=1 SV=1; Enhancer of rudimentary homolog OS=Mus musculus OX=10090 GN=1700018B24Rik PE=2 SV=1; Enhancer of rudimentary homolog OS=Mus musculus OX=10090 GN=1700018B24Rik PE=2 SV=1; Enhancer of rudimentary homolog OS=Mus musculus OX=10090 GN=Erh PE=1 SV=1; Enhancer of rudimentary homolog OS=Mus musculus OX=10090 GN=Erh PE=1 SV=1; Enhancer of rudimentary homolog OS=Mus musculus OX=10090 GN=1700018B24Rik PE=2 SV=1 0 3 3 0.3221 0 1 1 1 469.92801 1407.76947 1407.77064 -0.83 -0.00039 0/0 0 0 16284982 HCD 30 MS2 45.9405 1309.3 97.977 70.6383 21351 21351 21345 QEplus033719.raw F4 1291.9 1183.2 1465.2 1099.8 1462.5 1353.5 347 2.98 1 FALSE 0.0003211 0.00618 0.475 -250 104376 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGHVAQIYAIR [K].gGGHVAQIYAIR.[Q] N-Term(TMT6plex) 3 Q641N3 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 Q641N3; P14131; Q5CZY9 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1; 40S ribosomal protein S16 OS=Mus musculus OX=10090 GN=Rps16 PE=1 SV=4; Rps16 protein OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 0 2 2 0.7316 0 1 1 1 735.92261 1470.83794 1470.83786 0.05 0.00004 0/0 0 0 9523977 HCD 30 MS2 0 460.9 110 70.6433 21353 21353 21345 QEplus033719.raw F4 432.4 414 557 395.4 490.9 475.7 399 4.62 1 FALSE 1.14E-05 5.33E-12 2.239 -250 104393 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STTPDITGYR [R].sTTPDITGYR.[I] N-Term(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.5914 0 1 1 1 670.35675 1339.70622 1339.70551 0.53 0.00036 0/0 0 0 3684495.5 HCD 30 MS2 0 388.6 110 70.6557 21357 21357 21356 QEplus033719.raw F4 372.5 344.5 419.3 389.1 406.2 400.2 223 2.79 3 FALSE 1.14E-05 0.000324 0.759 -250 104402 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EANYIDK [K].eANYIDk.[I] N-Term(TMT6plex); K7(TMT6plex) 6 P47199 Quinone oxidoreductase OS=Mus musculus OX=10090 GN=Cryz PE=1 SV=1 P47199; A0A0A6YXR4; Q3UYY0; Q80XR3; V9GXY8; A0A0A6YVS7 "Quinone oxidoreductase OS=Mus musculus OX=10090 GN=Cryz PE=1 SV=1; Quinone oxidoreductase (Fragment) OS=Mus musculus OX=10090 GN=Cryz PE=1 SV=5; PKS_ER domain-containing protein OS=Mus musculus OX=10090 GN=Cryz PE=2 SV=1; Crystallin, zeta OS=Mus musculus OX=10090 GN=Cryz PE=2 SV=1; Quinone oxidoreductase OS=Mus musculus OX=10090 GN=Cryz PE=1 SV=1; Quinone oxidoreductase (Fragment) OS=Mus musculus OX=10090 GN=Cryz PE=1 SV=5" 0 2 2 0.4659 0 1 1 1 655.87225 1310.73723 1310.73564 1.21 0.0008 0/0 0 0 4101401 HCD 30 MS2 53.87733 635.7 110 70.6582 21358 21358 21356 QEplus033719.raw F4 622.5 554.8 673.9 555.4 740.9 666.8 312 2.49 1 FALSE 0.001028 0.01342 0.353 -250 104404 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YLGDGPK [K].yLGDGPk.[L] N-Term(TMT6plex); K7(TMT6plex) 1 P62192 26S proteasome regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmc1 PE=1 SV=1 P62192 26S proteasome regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmc1 PE=1 SV=1 0 2 2 0.2353 0 1 1 1 604.35876 1207.71025 1207.70869 1.29 0.00078 0/0 0 0 38491360 HCD 30 MS2 50.42873 1051.5 21.421 70.6604 21359 21359 21356 QEplus033719.raw F4 1041.6 899.5 1166.7 911.7 1185 1104.8 386 2.04 1 FALSE 0.0007626 0.01067 0.394 -250 104430 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVSADPEFAR [K].kVSADPEFAR.[K] N-Term(TMT6plex); K1(TMT6plex) 2 Q542P5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Cbr2 PE=1 SV=1 Q542P5; F6YNX9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Cbr2 PE=1 SV=1; Carbonyl reductase [NADPH] 2 (Fragment) OS=Mus musculus OX=10090 GN=Cbr2 PE=1 SV=1 1 3 3 0.4559 0 1 1 1 526.64221 1577.91208 1577.90516 4.39 0.00231 0/0 0 0 15238241 HCD 30 MS2 50.01312 1216.1 53.444 70.6672 21362 21362 21356 QEplus033719.raw F4 1408.2 894.9 1288.1 1285 1152.1 1268.2 444 2.04 1 FALSE 0.0002419 0.004809 0.506 -250 104449 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQFSNK [K].vQFSNk.[S] N-Term(TMT6plex); K6(TMT6plex) 2 Q99LB6 Methionine adenosyltransferase 2 subunit beta OS=Mus musculus OX=10090 GN=Mat2b PE=1 SV=1 Q99LB6-2; Q99LB6 Isoform 2 of Methionine adenosyltransferase 2 subunit beta OS=Mus musculus OX=10090 GN=Mat2b; Methionine adenosyltransferase 2 subunit beta OS=Mus musculus OX=10090 GN=Mat2b PE=1 SV=1 0 2 2 0.4474 0 1 1 1 590.85986 1180.71245 1180.70903 2.9 0.00171 0/0 0 0 6388088 HCD 30 MS2 0 1068.4 110 70.6723 21364 21364 21356 QEplus033719.raw F4 1133.9 956.3 1119.4 887.4 1146.8 1166.5 179 2.28 1 FALSE 0.004832 0.08453 0.049 -250 104458 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALTPPADPPR [K].aLTPPADPPR.[Y] N-Term(TMT6plex) 5 Q3TJD7 PDZ and LIM domain protein 7 OS=Mus musculus OX=10090 GN=Pdlim7 PE=1 SV=1 B8JJB3; Q8BVJ7; B8JJB2; Q3TJD7; Q3TJD7-3 PDZ and LIM domain protein 7 OS=Mus musculus OX=10090 GN=Pdlim7 PE=1 SV=1; PDZ and LIM domain protein 7 OS=Mus musculus OX=10090 GN=Pdlim7 PE=1 SV=1; PDZ and LIM domain protein 7 (Fragment) OS=Mus musculus OX=10090 GN=Pdlim7 PE=1 SV=1; PDZ and LIM domain protein 7 OS=Mus musculus OX=10090 GN=Pdlim7 PE=1 SV=1; Isoform 3 of PDZ and LIM domain protein 7 OS=Mus musculus OX=10090 GN=Pdlim7 0 2 2 0.6113 0 1 1 1 632.36737 1263.72746 1263.72585 1.28 0.00081 0/0 0 0 4176891 HCD 30 MS2 20.8086 763.5 110 70.6748 21365 21365 21356 QEplus033719.raw F4 795.5 611.7 790.4 608.2 934.9 840.5 442 2.47 1 FALSE 0.002024 0.03532 0.192 -250 104468 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGQALASNVDYR [K].eGQALASNVDYR.[Q] N-Term(TMT6plex) 3 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 A0A571BF58; A0A571BF46; A2AQB2 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 2 2 0.6971 0 1 1 1 776.4021 1551.79692 1551.79645 0.3 0.00024 0/0 0 0 3465207 HCD 30 MS2 42.50756 282.2 110 70.6773 21366 21366 21356 QEplus033719.raw F4 257.5 157.4 315 395.6 129.8 438.1 235 3.83 1 FALSE 1.14E-05 2.89E-12 2.289 -250 104475 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVVGVVAGGGR [R].aVVGVVAGGGR.[I] N-Term(TMT6plex) 2 P62918 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2 Q3UJS0; P62918 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2 0 2 2 0.565 0 1 1 1 585.86212 1170.71697 1170.71562 1.15 0.00067 0/0 0 0 141417936 HCD 30 MS2 56.14639 829.3 6.558 70.6846 21368 21368 21367 QEplus033719.raw F4 796.6 798.5 947.6 635.7 943 854.7 235 3.31 1 FALSE 1.14E-05 3.28E-08 1.519 -250 104485 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQIIVEEAK [K].rQIIVEEAk.[Q] N-Term(TMT6plex); K9(TMT6plex) 2 Q3UHW9 ADF-H domain-containing protein OS=Mus musculus OX=10090 GN=Cfl2 PE=1 SV=1 A0A1Y7VJ71; Q3UHW9 Cofilin-2 OS=Mus musculus OX=10090 GN=Cfl2 PE=1 SV=1; ADF-H domain-containing protein OS=Mus musculus OX=10090 GN=Cfl2 PE=1 SV=1 1 3 3 0.569 0 1 1 1 515.3241 1543.95774 1543.9572 0.35 0.00018 0/0 0 0 37931104 HCD 30 MS2 34.5873 925.1 22.496 70.6869 21369 21369 21367 QEplus033719.raw F4 932.9 609.7 1035.3 872.3 837.9 1262.2 359 4.71 1 FALSE 1.14E-05 2.30E-09 1.738 -250 104491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APNTPASGANGDGSMSQTQSGSTVK [R].aPNTPASGANGDGSMSQTQSGSTVk.[A] N-Term(TMT6plex); K25(TMT6plex) 1 P15636 SWISS-PROT:P15636 Protease I precursor Lysyl endopeptidase Achromobacter lyticus. P15636 SWISS-PROT:P15636 Protease I precursor Lysyl endopeptidase Achromobacter lyticus. 0 4 4 0.8235 0 1 1 1 702.85236 2808.38759 2808.38342 1.49 0.00104 0/0 0 0 30312178 HCD 30 MS2 22.82048 419.8 61.291 70.6892 21370 21370 21367 QEplus033719.raw F4 557.6 307.4 455.1 327.3 396.5 474.8 237 5.44 1 TRUE 1.14E-05 1.34E-10 1.973 -250 104497 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STPGTPLAK [K].sTPGTPLAk.[A] N-Term(TMT6plex); K9(TMT6plex) 1 Q8CI43 Myosin light chain 6B OS=Mus musculus OX=10090 GN=Myl6b PE=1 SV=1 Q8CI43 Myosin light chain 6B OS=Mus musculus OX=10090 GN=Myl6b PE=1 SV=1 0 2 2 0.5777 0 1 1 1 665.41083 1329.81438 1329.81422 0.12 0.00008 0/0 0 0 28050520 HCD 30 MS2 34.33271 845.6 29.037 70.6914 21371 21371 21367 QEplus033719.raw F4 1066.5 363.7 781.8 1228.6 496.4 1136.6 347 2.96 1 FALSE 0.0005076 0.008008 0.439 -250 104533 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STPGTPLAK [K].sTPGTPLAk.[A] N-Term(TMT6plex); K9(TMT6plex) 1 Q8CI43 Myosin light chain 6B OS=Mus musculus OX=10090 GN=Myl6b PE=1 SV=1 Q8CI43 Myosin light chain 6B OS=Mus musculus OX=10090 GN=Myl6b PE=1 SV=1 0 3 3 0.4138 0 1 1 1 443.94321 1329.81507 1329.81422 0.64 0.00028 0/0 0 0 9700887 HCD 30 MS2 35.2946 808.8 61.856 70.7005 21375 21375 21367 QEplus033719.raw F4 889.9 479.8 818.1 928.1 682 1055.2 347 3.19 1 FALSE 0.001607 0.02519 0.243 -250 104541 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDTEDVEK [K].vDTEDVEk.[K] N-Term(TMT6plex); K8(TMT6plex) 2 Q9R1T2 SUMO-activating enzyme subunit 1 OS=Mus musculus OX=10090 GN=Sae1 PE=1 SV=1 Q9R1T2; Q9R1T2-2 SUMO-activating enzyme subunit 1 OS=Mus musculus OX=10090 GN=Sae1 PE=1 SV=1; Isoform 2 of SUMO-activating enzyme subunit 1 OS=Mus musculus OX=10090 GN=Sae1 0 2 2 0.5714 0 1 1 1 696.8822 1392.75713 1392.76225 -3.68 -0.00256 0/0 0 0 12498129 HCD 30 MS2 8.226096 903.9 110 70.703 21376 21376 21367 QEplus033719.raw F4 878.2 813.9 957.8 649.5 1227.2 896.6 382 3.15 1 FALSE 1.14E-05 0.0005597 0.713 -250 104548 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEKPAVAAAPK [R].eEkPAVAAAPk.[K] N-Term(TMT6plex); K3(TMT6plex); K11(TMT6plex) 1 Q52L78 Alpha(B)-crystallin OS=Mus musculus OX=10090 GN=Cryab PE=1 SV=1 Q52L78 Alpha(B)-crystallin OS=Mus musculus OX=10090 GN=Cryab PE=1 SV=1 0 3 3 0.5293 0 1 1 1 600.03973 1798.10465 1798.10415 0.28 0.00017 0/0 0 0 16566524 HCD 30 MS2 4.167923 1182.3 110 70.7125 21379 21379 21378 QEplus033719.raw F4 1415.3 492.7 1318.7 1628.9 537.4 1700.6 198 4.44 1 FALSE 1.14E-05 3.95E-09 1.694 -250 104565 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLMHGK [R].lLMHGk.[E] N-Term(TMT6plex); K6(TMT6plex) 19 Q61990; P60335; P57722 Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1;Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1;Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3 A0A2R8VHY9; Q61990; Q61990-3; A0A2R8VI71; A0A2R8VHI3; A0A2R8VI25; Q3TF69; B2M1R7; A0A2R8VHN3; Q61990-2; A0A2R8W6L5; Q8CFQ6; P60335; Q3TT81; P57722; A0A2R8VI12; A0A2R8VHP9; P57722-2; E9Q7D8 Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 3 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pcbp2 PE=2 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Pcbp3 protein OS=Mus musculus OX=10090 GN=Pcbp3 PE=2 SV=1; Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3; Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=1 0 3 3 0.2578 0 1 1 1 386.24744 1156.72776 1156.72766 0.09 0.00003 0/0 0 0 121936072 HCD 30 MS2 6.566121 572 9.301 70.717 21381 21381 21378 QEplus033719.raw F4 525 559.4 675 423.2 648.5 601.1 175 3.22 3 FALSE 0.0007341 0.01052 0.396 -250 104585 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQAYPDQKPGTSGLR [K].tQAYPDQkPGTSGLR.[K] N-Term(TMT6plex); K8(TMT6plex) 4 Q66JR7 Pgm2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1 Q66JR7; Q9D0F9; Q5RJV4; Q7TNU0 Pgm2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1; Phosphoglucomutase-1 OS=Mus musculus OX=10090 GN=Pgm1 PE=1 SV=4; Phosphoglucomutase 2 OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1; Pgm2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pgm1 PE=2 SV=1 0 3 3 0.7321 0 1 1 1 693.05365 2077.1464 2077.14422 1.05 0.00072 0/0 0 0 17637176 HCD 30 MS2 5.021567 575.2 110 70.7263 21385 21385 21378 QEplus033719.raw F4 528.6 337.5 548.1 874.3 424.1 738.9 433 5.3 1 FALSE 1.14E-05 2.65E-12 2.296 -250 104593 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NHIQLVK [R].nHIQLVk.[S] N-Term(TMT6plex); K7(TMT6plex) 2 Q9JIQ3 "Diablo homolog, mitochondrial OS=Mus musculus OX=10090 GN=Diablo PE=1 SV=2" Q9JIQ3; Q7TPS3 "Diablo homolog, mitochondrial OS=Mus musculus OX=10090 GN=Diablo PE=1 SV=2; Diablo homolog, mitochondrial OS=Mus musculus OX=10090 GN=Diablo PE=2 SV=1" 0 3 3 0.5104 0 1 1 1 437.28412 1309.8378 1309.83563 1.66 0.00073 0/0 0 0 16026463 HCD 30 MS2 36.70336 771.7 71.3 70.7286 21386 21386 21378 QEplus033719.raw F4 827.5 560.3 830.1 718.9 755.9 937.3 74 3.35 1 FALSE 3.35E-05 0.001314 0.638 -250 104615 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MCCCSYNIGR [K].mcccSYNIGR.[A] N-Term(TMT6plex); C2(Carbamidomethyl); C3(Carbamidomethyl); C4(Carbamidomethyl) 2 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 0 2 2 0.9496 0 1 1 1 775.3313 1549.65532 1549.65813 -1.81 -0.0014 0/0 0 0 3975348 HCD 30 MS2 0 304.4 110 70.741 21390 21390 21389 QEplus033719.raw F4 239.9 216.4 371.5 368.7 182.1 447.6 2 4.17 1 FALSE 1.14E-05 4.85E-06 1.107 -250 104630 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TWQANLR [K].tWQANLR.[L] N-Term(TMT6plex) 4 A0A0G2JGT5 Eukaryotic translation initiation factor 4E (Fragment) OS=Mus musculus OX=10090 GN=Eif4e PE=1 SV=1 Q8C470; A0A0G2JGT5; Q3TK95; A0A0G2JG98 Uncharacterized protein OS=Mus musculus OX=10090 GN=Eif4e PE=2 SV=1; Eukaryotic translation initiation factor 4E (Fragment) OS=Mus musculus OX=10090 GN=Eif4e PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Eif4e PE=1 SV=1; Eukaryotic translation initiation factor 4E OS=Mus musculus OX=10090 GN=Eif4e PE=1 SV=1 0 2 2 0.3938 0 1 1 1 559.32184 1117.6364 1117.63156 4.33 0.00242 0/0 0 0 33642812 HCD 30 MS2 49.5345 715.2 24.389 70.7477 21393 21393 21389 QEplus033719.raw F4 786 495.9 732.8 696.2 735.3 845.1 322 2.59 1 FALSE 0.0003496 0.006699 0.464 -250 104648 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GFMSNK [K].gFMSNk.[H] N-Term(TMT6plex); K6(TMT6plex) 9 Q3TCR7; P39054 Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1;Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2 Q3TCR7; P39054; Q91Z39; P39054-2; G3X9G4; F8WIV5; Q3T9X3; Q3TBU6; G3UZZ3 Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=2 SV=1; Isoform 2 of Dynamin-2 OS=Mus musculus OX=10090 GN=Dnm2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=2; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1; Dynamin GTPase OS=Mus musculus OX=10090 GN=Dnm2 PE=2 SV=1; Dynamin GTPase (Fragment) OS=Mus musculus OX=10090 GN=Dnm2 PE=1 SV=1 0 2 2 0.113 0 1 1 1 571.32568 1141.64409 1141.64399 0.09 0.00005 0/0 0 0 16009492 HCD 30 MS2 46.51101 1495.1 83.893 70.7525 21395 21395 21389 QEplus033719.raw F4 1630.3 1200.9 1573.2 1352.1 1623.2 1591 141 1.77 2 FALSE 0.005595 0.09424 0.022 -250 104667 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDAAVEMK [K].tDAAVEMk.[R] N-Term(TMT6plex); K8(TMT6plex) 5 A0A0R4J1E3 Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1 F7CPL2; Q9QXS6-3; Q9QXS6; A0A0R4J1E3; Q9QXS6-2 Drebrin (Fragment) OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1; Isoform E2 of Drebrin OS=Mus musculus OX=10090 GN=Dbn1; Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=4; Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1; Isoform A2 of Drebrin OS=Mus musculus OX=10090 GN=Dbn1 0 2 2 0.4893 0 1 1 1 661.87427 1322.74126 1322.73901 1.7 0.00112 0/0 0 0 12856887 HCD 30 MS2 33.84364 1215.6 110 70.7575 21397 21397 21389 QEplus033719.raw F4 1383.5 986 1415.5 843.9 1426.9 1238 440 2.8 1 FALSE 1.14E-05 0.0001039 0.854 -250 104676 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVVGVVAGGGR [R].aVVGVVAGGGR.[I] N-Term(TMT6plex) 2 P62918 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2 Q3UJS0; P62918 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2 0 3 3 0.713 0 1 1 1 390.90958 1170.71418 1170.71562 -1.24 -0.00048 0/0 0 0 10003677 HCD 30 MS2 46.73047 379.4 58.893 70.7598 21398 21398 21389 QEplus033719.raw F4 373.7 246.2 372.4 438.7 341.9 503.4 256 3.38 1 FALSE 1.14E-05 0.0004089 0.739 -250 104689 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPGPNVAVNTK [R].sPGPNVAVNTk.[D] N-Term(TMT6plex); K11(TMT6plex) 6 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q52KG8; Q5RKM8; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Hspg2 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Hspg2 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.7192 0 1 1 1 771.45691 1541.90654 1541.90516 0.89 0.00069 0/0 0 0 9106801 HCD 30 MS2 0 353.1 110 70.7697 21401 21401 21400 QEplus033719.raw F4 343.1 320.3 481.8 341 259.8 372.4 350 3.81 2 FALSE 1.14E-05 1.27E-07 1.407 -250 104698 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALTHLEMR [K].aLTHLEMR.[R] N-Term(TMT6plex) 2 Q9R190 Metastasis-associated protein MTA2 OS=Mus musculus OX=10090 GN=Mta2 PE=1 SV=1 Q3TZP3; Q9R190 Uncharacterized protein OS=Mus musculus OX=10090 GN=Mta2 PE=2 SV=1; Metastasis-associated protein MTA2 OS=Mus musculus OX=10090 GN=Mta2 PE=1 SV=1 0 3 3 0.4557 0 1 1 1 400.56369 1199.67652 1199.67679 -0.23 -0.00009 0/0 0 0 12126725 HCD 30 MS2 17.85948 400.9 72.898 70.7719 21402 21402 21400 QEplus033719.raw F4 381.2 339.1 431.2 274.1 527.2 452.3 233 4.06 1 FALSE 3.35E-05 0.001121 0.652 -250 104708 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLMHGK [R].lLMHGk.[E] N-Term(TMT6plex); K6(TMT6plex) 19 Q61990; P60335; P57722 Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1;Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1;Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3 A0A2R8VHY9; Q61990; Q61990-3; A0A2R8VI71; A0A2R8VHI3; A0A2R8VI25; Q3TF69; B2M1R7; A0A2R8VHN3; Q61990-2; A0A2R8W6L5; Q8CFQ6; P60335; Q3TT81; P57722; A0A2R8VI12; A0A2R8VHP9; P57722-2; E9Q7D8 Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 3 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pcbp2 PE=2 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Pcbp3 protein OS=Mus musculus OX=10090 GN=Pcbp3 PE=2 SV=1; Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3; Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=1 0 2 2 0.0884 0 1 1 1 578.86554 1156.7238 1156.72766 -3.33 -0.00193 0/0 0 0 21322336 HCD 30 MS2 39.43781 936.2 33.627 70.7764 21404 21404 21400 QEplus033719.raw F4 902.9 887.3 1063 745.7 1001.6 1016.9 135 2.49 3 FALSE 0.004757 0.08362 0.052 -250 104753 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAGAVIGK [K].nAGAVIGk.[G] N-Term(TMT6plex); K8(TMT6plex) 18 Q5FWJ5 Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 P61979-3; Q3U9Q3; A0A286YEC4; H3BJ43; A0A286YCM2; A0A286YDH1; Q3TUA1; Q5FWJ5; H3BKD0; H3BK96; Q8BT23; P61979; A0A286YDM3; B2M1R6; Q3U6X2; Q3TL71; Q3TJ38; H3BKI8 Isoform 3 of Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1 0 2 2 0.4621 0 1 1 1 594.38019 1187.7531 1187.75123 1.58 0.00094 0/0 0 0 231228864 HCD 30 MS2 21.63898 898.5 6.214 70.7985 21412 21412 21411 QEplus033719.raw F4 919.6 809.7 931.9 602 1268.8 858.9 300 2.9 1 FALSE 0.0003408 0.006467 0.469 -250 104760 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APNTPASGANGDGSMSQTQSGSTVK [R].aPNTPASGANGDGSMSQTQSGSTVk.[A] N-Term(TMT6plex); K25(TMT6plex) 1 P15636 SWISS-PROT:P15636 Protease I precursor Lysyl endopeptidase Achromobacter lyticus. P15636 SWISS-PROT:P15636 Protease I precursor Lysyl endopeptidase Achromobacter lyticus. 0 3 3 0.8767 0 1 1 1 936.8006 2808.38724 2808.38342 1.36 0.00127 0/0 0 0 48778392 HCD 30 MS2 0 328.4 60.722 70.8008 21413 21413 21411 QEplus033719.raw F4 547.4 233.7 300.3 208.7 332.3 348.1 237 9 1 TRUE 1.14E-05 6.31E-16 3.375 -250 104766 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVLTSR [KR].lVLTSR.[HS] N-Term(TMT6plex) 6 Q3UHT6 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1 Q3UZW7-2; Q3UHT6; P19096; Q3UZW7; Q3TB22; A0A0U1RNJ1 Isoform 2 of Protein-lysine N-methyltransferase EEF2KMT OS=Mus musculus OX=10090 GN=Eef2kmt; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2; Protein-lysine N-methyltransferase EEF2KMT OS=Mus musculus OX=10090 GN=Eef2kmt PE=1 SV=1; Fatty acid synthase (Fragment) OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=1 0 2 2 0.1193 0 1 1 1 459.30298 917.59868 917.59813 0.6 0.00027 0/0 0 0 30473852 HCD 30 MS2 46.74586 881.6 29.712 70.8031 21414 21414 21411 QEplus033719.raw F4 1088 753.9 1006.8 689.7 811.4 940 40 2.18 1 FALSE 0.003708 0.07081 0.086 -250 104776 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAGAVIGK [K].nAGAVIGk.[G] N-Term(TMT6plex); K8(TMT6plex) 18 Q5FWJ5 Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 P61979-3; Q3U9Q3; A0A286YEC4; H3BJ43; A0A286YCM2; A0A286YDH1; Q3TUA1; Q5FWJ5; H3BKD0; H3BK96; Q8BT23; P61979; A0A286YDM3; B2M1R6; Q3U6X2; Q3TL71; Q3TJ38; H3BKI8 Isoform 3 of Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1 0 3 3 0.3729 0 1 1 1 396.58868 1187.7515 1187.75123 0.23 0.00009 0/0 0 0 29725870 HCD 30 MS2 40.3381 581.1 25.875 70.8053 21415 21415 21411 QEplus033719.raw F4 574.6 541.9 614.2 437.3 761.2 557.2 333 2.36 1 FALSE 0.001083 0.01405 0.345 -250 104782 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVYTGDALR [R].dVYTGDALR.[I] N-Term(TMT6plex) 2 Q6RI64 Proteasome subunit beta OS=Mus musculus OX=10090 GN=Psmb1 PE=1 SV=1 Q6RI64; A0A338P7C0 Proteasome subunit beta OS=Mus musculus OX=10090 GN=Psmb1 PE=1 SV=1; Proteasome subunit beta type-1 OS=Mus musculus OX=10090 GN=Psmb1 PE=1 SV=1 0 2 2 0.5577 0 1 1 1 619.83295 1238.65862 1238.65783 0.63 0.00039 0/0 0 0 25623484 HCD 30 MS2 3.51792 910.7 76.099 70.8076 21416 21416 21411 QEplus033719.raw F4 935 774 997.8 843.3 923.3 991.1 243 3.55 1 FALSE 1.14E-05 2.70E-06 1.156 -250 104790 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRFVNDYDK [K].dRFVNDYDk.[D] N-Term(TMT6plex); K9(TMT6plex) 2 Q3TE95 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rcn2 PE=2 SV=1 Q3TE95; Q8BP92 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rcn2 PE=2 SV=1; Reticulocalbin-2 OS=Mus musculus OX=10090 GN=Rcn2 PE=1 SV=1 1 3 3 0.5822 0 1 1 1 543.95905 1629.86258 1629.86369 -0.68 -0.00037 0/0 0 0 17020966 HCD 30 MS2 34.79007 1214.3 83.349 70.8098 21417 21417 21411 QEplus033719.raw F4 1344.1 910 1280.9 1200.8 1245.5 1304.3 285 3.83 1 FALSE 1.14E-05 0.0005316 0.717 -250 104802 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FNTPQQPK [K].fNTPQQPk.[K] N-Term(TMT6plex); K8(TMT6plex) 3 Q3TJF2 Obg-like ATPase 1 OS=Mus musculus OX=10090 GN=Ola1 PE=2 SV=1 Q3TJF2; Q3TW21; Q9CZ30 Obg-like ATPase 1 OS=Mus musculus OX=10090 GN=Ola1 PE=2 SV=1; Obg-like ATPase 1 OS=Mus musculus OX=10090 GN=Ola1 PE=2 SV=1; Obg-like ATPase 1 OS=Mus musculus OX=10090 GN=Ola1 PE=1 SV=1 0 2 2 0.6043 0 1 1 1 709.41382 1417.82036 1417.82037 -0.01 -0.00001 0/0 0 0 5496764.5 HCD 30 MS2 0 530.2 110 70.8148 21419 21419 21411 QEplus033719.raw F4 529.3 424.6 605.5 443.1 565.2 613.3 429 2.78 1 FALSE 0.001074 0.01397 0.346 -250 104807 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVDQNLMDR [K].dVDQNLMDR.[L] N-Term(TMT6plex) 4 F8VQJ3 Laminin subunit gamma-1 OS=Mus musculus OX=10090 GN=Lamc1 PE=1 SV=1 F8VQJ3; F6TLW1; Q3URV4; P02468 Laminin subunit gamma-1 OS=Mus musculus OX=10090 GN=Lamc1 PE=1 SV=1; Laminin subunit gamma-1 (Fragment) OS=Mus musculus OX=10090 GN=Lamc1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lamc1 PE=2 SV=1; Laminin subunit gamma-1 OS=Mus musculus OX=10090 GN=Lamc1 PE=1 SV=2 0 2 2 0.6167 0 1 1 1 667.83246 1334.65764 1334.65718 0.34 0.00023 0/0 0 0 2286456.25 HCD 30 MS2 85.57281 697.3 110 70.8174 21420 21420 21411 QEplus033719.raw F4 743.9 500.2 713.7 669.7 757.8 798.6 132 2.87 1 FALSE 1.14E-05 3.01E-05 0.956 -250 104814 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPQDAEKDPAKPEQVEAR [K].tPQDAEkDPAkPEQVEAR.[A] N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex) 1 Q9DBG5 Perilipin-3 OS=Mus musculus OX=10090 GN=Plin3 PE=1 SV=1 Q9DBG5 Perilipin-3 OS=Mus musculus OX=10090 GN=Plin3 PE=1 SV=1 1 4 4 0.4807 0 1 1 1 674.87646 2696.48403 2696.48222 0.67 0.00045 0/0 0 0 18567946 HCD 30 MS2 2.114638 793.3 110 70.8199 21421 21421 21411 QEplus033719.raw F4 802.1 735.1 930 620.4 813.6 858.7 457 3.62 1 FALSE 1.14E-05 2.74E-06 1.154 -250 104830 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVGDDIAK [K].kVGDDIAk.[A] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 4 Q5BLK0; Q8C2K0 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=1 SV=1;60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1 Q6DI58; Q3TIQ2; Q5BLK0; Q8C2K0 Rpl12 protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1; 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1; 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=1 SV=1; 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1 1 2 2 0.5015 0 1 1 1 766.98425 1532.96123 1532.9615 -0.18 -0.00014 0/0 0 0 14508088 HCD 30 MS2 0 753.8 110 70.8297 21424 21424 21422 QEplus033719.raw F4 806.1 635.6 784.9 578.1 912.3 805.8 338 3.27 2 FALSE 1.14E-05 0.0005129 0.72 -250 104836 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HMLPSGFR [K].hMLPSGFR.[K] N-Term(TMT6plex) 2 P62911 60S ribosomal protein L32 OS=Mus musculus OX=10090 GN=Rpl32 PE=1 SV=2 Q5PR09; P62911 Ribosomal protein L32 OS=Mus musculus OX=10090 GN=Rpl32 PE=2 SV=1; 60S ribosomal protein L32 OS=Mus musculus OX=10090 GN=Rpl32 PE=1 SV=2 0 3 3 0.7524 0 1 1 1 391.88489 1173.64011 1173.64001 0.08 0.00003 0/0 0 0 20419048 HCD 30 MS2 9.749376 332 60.411 70.832 21425 21425 21422 QEplus033719.raw F4 326.6 233.7 350.7 342.2 341.6 397.2 246 3.15 1 FALSE 0.001213 0.01646 0.316 -250 104840 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEKPAVAAAPK [R].eEkPAVAAAPk.[K] N-Term(TMT6plex); K3(TMT6plex); K11(TMT6plex) 1 Q52L78 Alpha(B)-crystallin OS=Mus musculus OX=10090 GN=Cryab PE=1 SV=1 Q52L78 Alpha(B)-crystallin OS=Mus musculus OX=10090 GN=Cryab PE=1 SV=1 0 4 4 0.4841 0 1 1 1 450.28357 1798.11245 1798.10415 4.62 0.00208 0/0 0 0 8089876.5 HCD 30 MS2 40.43124 596.9 89.244 70.8342 21426 21426 21422 QEplus033719.raw F4 636.7 337.8 667.9 671.9 443 824.3 193 3.47 1 FALSE 0.0002909 0.005817 0.483 -250 104847 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAGDMK [K].lAGDMk.[N] N-Term(TMT6plex); K6(TMT6plex) 3 Q8C1W9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nap1l4 PE=2 SV=1 Q8C1W9; B7ZNL2; Q78ZA7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nap1l4 PE=2 SV=1; Nap1l4 protein OS=Mus musculus OX=10090 GN=Nap1l4 PE=1 SV=1; Nucleosome assembly protein 1-like 4 OS=Mus musculus OX=10090 GN=Nap1l4 PE=1 SV=1 0 2 2 0.4427 0 1 1 1 546.82874 1092.65019 1092.64874 1.33 0.00073 0/0 0 0 7550428 HCD 30 MS2 49.35706 1542.8 110 70.8367 21427 21427 21422 QEplus033719.raw F4 1676.8 1111 1548.7 1360.1 1781.6 1778.8 131 1.92 1 FALSE 0.003691 0.07068 0.086 -250 104871 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIASEYK [R].eIASEYk.[Y] N-Term(TMT6plex); K7(TMT6plex) 7 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; Q62411; F6RDH3; Q62412; A0A571BF46; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=1 SV=8; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 2 2 0.4533 0 1 1 1 649.37445 1297.74162 1297.74039 0.95 0.00062 0/0 0 0 15388650 HCD 30 MS2 23.91194 1502.5 110 70.849 21432 21432 21422 QEplus033719.raw F4 1618.7 697 1496.2 2073 907.4 2222.5 286 2.89 1 FALSE 0.0008268 0.01136 0.383 -250 104894 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELVAEDK [R].eLVAEDk.[K] N-Term(TMT6plex); K7(TMT6plex) 2 Q9D2Y4 Mixed lineage kinase domain-like protein OS=Mus musculus OX=10090 GN=Mlkl PE=1 SV=1 Q9D2Y4; Q9D2Y4-2 Mixed lineage kinase domain-like protein OS=Mus musculus OX=10090 GN=Mlkl PE=1 SV=1; Isoform 2 of Mixed lineage kinase domain-like protein OS=Mus musculus OX=10090 GN=Mlkl 0 2 2 0.1888 0 1 1 1 631.37659 1261.7459 1261.74039 4.37 0.00275 0/0 0 0 11574463 HCD 30 MS2 31.52424 1262.4 110 70.8636 21437 21437 21433 QEplus033719.raw F4 1224.7 1146.4 1267.2 1032.4 1687.4 1216.2 572 2.33 1 FALSE 0.0004793 0.00763 0.446 -250 104900 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELYDAGVKR [R].eLYDAGVkR.[K] N-Term(TMT6plex); K8(TMT6plex) 5 Q542G9 Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1 Q9CZI7; B0V2N5; Q99KH3; Q542G9; Q3UCD3 Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1 1 3 3 0.4344 0 1 1 1 503.6337 1508.88654 1508.8837 1.88 0.00095 0/0 0 0 11219345 HCD 30 MS2 33.10952 1339.3 110 70.8661 21438 21438 21433 QEplus033719.raw F4 1381.8 1366.9 1480.2 1178.7 1421 1207.5 387 3.2 1 FALSE 1.14E-05 3.01E-05 0.956 -250 104905 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATVTPSPVK [K].aTVTPSPVk.[G] N-Term(TMT6plex); K9(TMT6plex) 2 A0A087WRY3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Mus musculus OX=10090 GN=Nucks1 PE=1 SV=1 A0A087WRY3; Q80XU3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Mus musculus OX=10090 GN=Nucks1 PE=1 SV=1; Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Mus musculus OX=10090 GN=Nucks1 PE=1 SV=1 0 2 2 0.4379 0 1 1 1 679.42621 1357.84514 1357.84552 -0.28 -0.00019 0/0 0 0 9398745 HCD 30 MS2 41.13156 908 110 70.8686 21439 21439 21433 QEplus033719.raw F4 928.7 908.7 1020.5 677.6 1042.7 870.1 327 3.54 1 FALSE 1.14E-05 9.06E-05 0.865 -250 104941 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLNIGPSK [R].rLNIGPSk.[V] N-Term(TMT6plex); K8(TMT6plex) 6 E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" A0A087WS16; D3YWD1; J3QQ16; Q9Z0I9; O88493; E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen, type VI, alpha 3 (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen alpha3(VI) (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Type VI collagen alpha 3 subunit OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" 1 3 3 0.4419 0 1 1 1 448.29013 1342.85584 1342.85709 -0.93 -0.00042 0/0 0 0 7435788.5 HCD 30 MS2 47.87542 735 110 70.8784 21443 21443 21433 QEplus033719.raw F4 852.7 601.3 689.3 642.7 933.7 690.5 177 3.01 1 FALSE 1.14E-05 0.0002346 0.786 -250 104949 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAYRPPK [K].lAYRPPk.[-] N-Term(TMT6plex); K7(TMT6plex) 2 Q9D0M3 "Cytochrome c1, heme protein, mitochondrial OS=Mus musculus OX=10090 GN=Cyc1 PE=1 SV=1" Q9D0M3; Q9D0M3-2 "Cytochrome c1, heme protein, mitochondrial OS=Mus musculus OX=10090 GN=Cyc1 PE=1 SV=1; Isoform 2 of Cytochrome c1, heme protein, mitochondrial OS=Mus musculus OX=10090 GN=Cyc1" 0 3 3 0.3081 0 1 1 1 434.94781 1302.82889 1302.82981 -0.71 -0.00031 0/0 0 0 3286255.5 HCD 30 MS2 73.57146 638.9 110 70.8857 21445 21445 21444 QEplus033719.raw F4 752.8 438.8 606 630.4 626.7 778.5 305 1.98 1 FALSE 0.001903 0.03249 0.205 -250 104964 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRVVSLSEK [K].dRVVSLSEk.[N] N-Term(TMT6plex); K9(TMT6plex) 4 O09161 Calsequestrin-2 OS=Mus musculus OX=10090 GN=Casq2 PE=1 SV=3 E9PZ67; O09161; B9EHC7; F6QYE1 Calsequestrin (Fragment) OS=Mus musculus OX=10090 GN=Casq2 PE=1 SV=1; Calsequestrin-2 OS=Mus musculus OX=10090 GN=Casq2 PE=1 SV=3; Calsequestrin OS=Mus musculus OX=10090 GN=Casq2 PE=2 SV=1; Calsequestrin OS=Mus musculus OX=10090 GN=Casq2 PE=1 SV=1 1 3 3 0.4491 0 1 1 1 497.63644 1490.89478 1490.89426 0.35 0.00017 0/0 0 0 22330752 HCD 30 MS2 21.1554 854.2 50.695 70.8905 21447 21447 21444 QEplus033719.raw F4 952 373.1 858.9 1182.3 468.9 1290.2 377 4.03 1 FALSE 1.14E-05 2.89E-06 1.15 -250 104988 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGVSTNISTK [K].aGVSTNISTk.[H] N-Term(TMT6plex); K10(TMT6plex) 11 Q6PFD9 Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=2 A0A140T8J8; Q3TP40; Q9EQM8; A0A1B0GRB5; Q3TPG3; B7ZN81; B2RQL0; Q6PFD9; A0A1B0GSX7; A0A1B0GRA7; Q3UJE5 Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1; Nucleoporin 98 (Fragment) OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1; Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Peptidase S59 domain-containing protein OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1; Nup98 protein OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1; Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=2; Nuclear pore complex protein Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Peptidase S59 domain-containing protein OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1 0 2 2 0.697 0 1 1 1 718.42841 1435.84953 1435.85206 -1.76 -0.00126 0/0 0 0 6119376 HCD 30 MS2 10.92747 548.4 110 70.8977 21450 21450 21444 QEplus033719.raw F4 535.6 522.3 600.9 408.5 661.6 561.5 362 3.96 1 FALSE 1.14E-05 1.55E-07 1.391 -250 105027 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YQEIAK [R].yQEIAk.[R] N-Term(TMT6plex); K6(TMT6plex) 2 Q9Z1P6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 OS=Mus musculus OX=10090 GN=Ndufa7 PE=1 SV=3 A0A068BGR9; Q9Z1P6 Complex I-B14.5a OS=Mus musculus OX=10090 GN=Ndufa7 PE=2 SV=1; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 OS=Mus musculus OX=10090 GN=Ndufa7 PE=1 SV=3 0 2 2 0.2385 0 1 1 1 605.36664 1209.726 1209.72434 1.37 0.00083 0/0 0 0 39766924 HCD 30 MS2 34.6095 1292.6 41.172 70.9196 21458 21458 21455 QEplus033719.raw F4 1309.6 1010.2 1393.9 1286.2 1301.6 1454 307 2.39 1 FALSE 0.003759 0.07137 0.084 -250 105037 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WQGEEVPR [R].wQGEEVPR.[S] N-Term(TMT6plex) 5 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q8CD09; Q9ERG0; Q8C7S2; Q8C3R7; Q8BT15 LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 0 2 2 0.7068 0 1 1 1 615.32721 1229.64714 1229.6476 -0.37 -0.00023 0/0 0 0 26777768 HCD 30 MS2 58.15715 1224 25.177 70.9218 21459 21459 21455 QEplus033719.raw F4 1190.3 881.7 1174.1 755.6 2289.8 1052.7 163 2.49 1 FALSE 0.0006126 0.009041 0.421 -250 105044 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HRPELIDYGK [R].hRPELIDYGk.[L] N-Term(TMT6plex); K10(TMT6plex) 2 A1BN54; Q7TPR4 Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1;Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 A1BN54; Q7TPR4 Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1; Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 0 4 4 0.554 0 1 1 1 422.24915 1685.97475 1685.97391 0.5 0.00021 0/0 0 0 16026566 HCD 30 MS2 58.26945 613.7 40.991 70.9241 21460 21460 21455 QEplus033719.raw F4 603.9 462.8 771.8 583.5 457.3 802.7 367 2.78 2 FALSE 1.14E-05 0.0006109 0.705 -250 105053 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETELPAK [K].eTELPAk.[E] N-Term(TMT6plex); K7(TMT6plex) 31 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q499F9; Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q05CR3; Q9QXS1-9; E9Q9J6; Q9QXS1-5; E9PW24; A0A0R4J221; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; A0A0R4J223; Q8C8S5; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.4504 0 1 1 1 623.37659 1245.7459 1245.74547 0.34 0.00021 0/0 0 0 11312182 HCD 30 MS2 43.53439 1131.9 110 70.9266 21461 21461 21455 QEplus033719.raw F4 1187.7 881.9 1140.3 976.9 1281.9 1322.9 467 2.82 2 FALSE 0.0002218 0.004632 0.51 -250 105067 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MADLHAVPR [K].mADLHAVPR.[G] N-Term(TMT6plex) 4 E9PWE8 Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 Q3TAS8; E9PWE8; Q62188; Q3TT92 Amidohydro-rel domain-containing protein OS=Mus musculus OX=10090 GN=Dpysl3 PE=2 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 0 3 3 0.6285 0 1 1 1 413.56708 1238.68668 1238.68769 -0.82 -0.00034 0/0 0 0 8838802 HCD 30 MS2 70.7422 737.1 81.362 70.9311 21463 21463 21455 QEplus033719.raw F4 880.2 486.9 741 642.3 812.1 860.4 301 3.58 1 FALSE 1.14E-05 6.26E-07 1.276 -250 105076 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGHAEQKDEMVPR [R].lGHAEQkDEMVPR.[L] N-Term(TMT6plex); K7(TMT6plex) 1 Q8BK67 Protein RCC2 OS=Mus musculus OX=10090 GN=Rcc2 PE=1 SV=1 Q8BK67 Protein RCC2 OS=Mus musculus OX=10090 GN=Rcc2 PE=1 SV=1 1 3 3 0.5795 0 1 1 1 656.69684 1968.07596 1968.0737 1.15 0.00075 0/0 0 0 4444311 HCD 30 MS2 0 497.2 110 70.9336 21464 21464 21455 QEplus033719.raw F4 465.3 524.5 566.2 366.1 561.7 499.1 392 3.9 1 FALSE 1.14E-05 2.79E-08 1.533 -250 105084 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMININSR [K].nMININSR.[L] N-Term(TMT6plex) 2 Q9D0I9 "Arginine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Rars1 PE=1 SV=2" Q3TVC5; Q9D0I9 "Arginine--tRNA ligase, cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Rars PE=2 SV=1; Arginine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Rars1 PE=1 SV=2" 0 2 2 0.4708 0 1 1 1 595.82928 1190.65129 1190.65131 -0.01 -0.00001 0/0 0 0 21569492 HCD 30 MS2 67.6174 2130 110 70.9361 21465 21465 21455 QEplus033719.raw F4 2009.4 1639.7 2293.9 1812.4 2486.9 2537.5 359 2.4 1 FALSE 4.43E-05 0.001658 0.616 -250 105105 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLIPAANTGESK [K].hLIPAANTGESk.[V] N-Term(TMT6plex); K12(TMT6plex) 3 P62259 14-3-3 protein epsilon OS=Mus musculus OX=10090 GN=Ywhae PE=1 SV=1 F6WA09; P62259; Q8BPH1 14-3-3 protein epsilon (Fragment) OS=Mus musculus OX=10090 GN=Ywhae PE=1 SV=1; 14-3-3 protein epsilon OS=Mus musculus OX=10090 GN=Ywhae PE=1 SV=1; 14_3_3 domain-containing protein OS=Mus musculus OX=10090 GN=Ywhae PE=2 SV=1 0 3 3 0.7363 0 1 1 1 565.99872 1695.9816 1695.97939 1.3 0.00074 0/0 0 0 58090772 HCD 30 MS2 22.6229 975.9 17.527 70.9482 21469 21469 21466 QEplus033719.raw F4 1057.3 862.1 1026.7 817.6 1198.4 893.5 408 4.93 1 FALSE 1.14E-05 9.45E-09 1.622 -250 105112 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLDQVEK [K].kLDQVEk.[E] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 5 Q9DB20 "ATP synthase subunit O, mitochondrial OS=Mus musculus OX=10090 GN=Atp5po PE=1 SV=1" F6XVM5; Q3THG0; Q9DB20; A0A338P776; Q3TF25 "ATP synthase subunit O, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Atp5o PE=1 SV=1; ATP synthase peripheral stalk subunit OSCP OS=Mus musculus OX=10090 GN=Atp5o PE=2 SV=1; ATP synthase subunit O, mitochondrial OS=Mus musculus OX=10090 GN=Atp5po PE=1 SV=1; ATP synthase subunit O, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Atp5o PE=1 SV=1; ATP synthase peripheral stalk subunit OSCP OS=Mus musculus OX=10090 GN=Atp5o PE=2 SV=1" 1 3 3 0.3805 0 1 1 1 516.33026 1546.97623 1546.97715 -0.6 -0.00031 0/0 0 0 23079224 HCD 30 MS2 25.29516 1484 62.15 70.9505 21470 21470 21466 QEplus033719.raw F4 1722.4 1051.6 1467.9 1740.6 1328 1593.6 349 3.18 1 FALSE 5.44E-05 0.001916 0.603 -250 105131 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGVSTNISTK [K].aGVSTNISTk.[H] N-Term(TMT6plex); K10(TMT6plex) 11 Q6PFD9 Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=2 A0A140T8J8; Q3TP40; Q9EQM8; A0A1B0GRB5; Q3TPG3; B7ZN81; B2RQL0; Q6PFD9; A0A1B0GSX7; A0A1B0GRA7; Q3UJE5 Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1; Nucleoporin 98 (Fragment) OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1; Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Peptidase S59 domain-containing protein OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1; Nup98 protein OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1; Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=2; Nuclear pore complex protein Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Nuclear pore complex protein Nup98-Nup96 OS=Mus musculus OX=10090 GN=Nup98 PE=1 SV=1; Peptidase S59 domain-containing protein OS=Mus musculus OX=10090 GN=Nup98 PE=2 SV=1 0 2 2 0.7165 0 1 1 1 718.43207 1435.85686 1435.85206 3.34 0.0024 0/0 0 0 9015894 HCD 30 MS2 9.704959 554.1 110 70.9553 21472 21472 21466 QEplus033719.raw F4 548.4 498.3 622.3 439.4 627.1 589 384 3.88 1 FALSE 1.14E-05 1.04E-08 1.614 -250 105145 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGNFGFGDSR [R].gGNFGFGDSR.[G] N-Term(TMT6plex) 4 O88569 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2 O88569-3; B7ZP22; O88569; O88569-2 Isoform 3 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2; Isoform 2 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 0 2 2 0.6773 0 1 1 1 621.80701 1242.60674 1242.60647 0.22 0.00014 0/0 0 0 29395914 HCD 30 MS2 23.39878 1608.7 110 70.96 21474 21474 21466 QEplus033719.raw F4 1708.3 1310.8 1801.9 1241.9 1680.4 1908.6 74 2.82 1 FALSE 1.14E-05 2.89E-05 0.96 -250 105148 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSVLPNSDK [K].gSVLPNSDk.[K] N-Term(TMT6plex); K9(TMT6plex) 2 P32020 Sterol carrier protein 2 OS=Mus musculus OX=10090 GN=Scp2 PE=1 SV=3 P32020; P32020-2 Sterol carrier protein 2 OS=Mus musculus OX=10090 GN=Scp2 PE=1 SV=3; Isoform SCP2 of Sterol carrier protein 2 OS=Mus musculus OX=10090 GN=Scp2 0 2 2 0.621 0 1 1 1 687.90356 1374.79985 1374.7993 0.4 0.00028 0/0 0 0 22538398 HCD 30 MS2 8.104957 961.3 110 70.9626 21475 21475 21466 QEplus033719.raw F4 997.8 905.5 1057.1 814.5 1072.6 920.6 503 3.14 1 FALSE 1.14E-05 0.0003554 0.751 -250 105155 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSAPPGPVPEGQIR [K].gSAPPGPVPEGQIR.[V] N-Term(TMT6plex) 3 O09131 Glutathione S-transferase omega-1 OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=2 O09131; A0A494BAB1; A0A494B9X6 Glutathione S-transferase omega-1 OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=2; Glutathione-dependent dehydroascorbate reductase OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=1; Glutathione S-transferase omega-1 (Fragment) OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=1 0 2 2 0.2808 0 1 1 1 795.94464 1590.88201 1590.88012 1.18 0.00094 0/0 0 0 8942042 HCD 30 MS2 36.74443 559.4 110 70.9651 21476 21476 21466 QEplus033719.raw F4 511.7 600.1 659.8 396.9 647.8 540.4 444 1.46 1 FALSE 5.44E-05 0.00201 0.598 -250 105163 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IIAPPER [RK].iIAPPER.[DK] N-Term(TMT6plex) 34 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q6GQT3; Q8BFZ3; Q3TG92; P63268; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61275; Q3UAF6; Q3U122; E9Q1F2; Q3UAA9; B2RRX1; Q61272; Q3U5R4; Q3UAF7; Q99NC5; Q3TIJ9; P62737; P68134; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; E9Q3M9; P68033; P63260; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804 "2010300C02Rik protein OS=Mus musculus OX=10090 GN=Cracdl PE=2 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Capping protein-inhibiting regulator of actin-like OS=Mus musculus OX=10090 GN=Cracdl PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 0 2 2 0.4755 0 1 1 1 512.8219 1024.63652 1024.63525 1.25 0.00064 0/0 0 0 1848617472 HCD 30 MS2 6.049489 480.8 0.675 70.9724 21478 21478 21477 QEplus033719.raw F4 455.8 373.7 516.5 447.4 506.3 584.9 36 2.04 4 FALSE 0.009821 0.1916 -0.127 -250 105173 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYSFTTTAER [-R].gYSFTTTAER.[E] N-Term(TMT6plex) 22 O89054; Q3UAF6 Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1 Q6IWE2; Q3UCF8; Q3TSB7; Q9QZ83; O89054; Q3UAF6; Q3UD81; E9Q1F2; Q3UAA9; B2RRX1; Q3U5R4; Q3UAF7; G3UZ07; Q3TIJ9; Q61276; Q3UBP6; E9Q5F4; Q3UBQ4; P63260; Q3U939; Q3UGS0; Q3U804 "Beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Cytoskeletal beta-actin (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 (Fragment) OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 1 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 0 2 2 0.6911 0 1 1 1 681.34924 1361.69121 1361.68986 0.99 0.00067 0/0 0 0 6371630.5 HCD 30 MS2 24.81185 577.2 110 70.9749 21479 21479 21477 QEplus033719.raw F4 585.6 540.8 636.7 413.7 711.8 574.8 145 3.82 2 FALSE 1.14E-05 5.27E-06 1.1 -250 105182 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVLGMR [K].dVLGMR.[H] N-Term(TMT6plex) 4 Q9DCD0 "6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=1 SV=3" Q9DCD0; Q3UAG2; Q91V28; Q91YT9 "6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=1 SV=3; 6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=2 SV=1; 6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=2 SV=1; 6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=2 SV=1" 0 2 2 0.3066 0 1 1 1 460.2655 919.52373 919.52325 0.52 0.00024 0/0 0 0 42551868 HCD 30 MS2 48.48763 781.9 19.913 70.9772 21480 21480 21477 QEplus033719.raw F4 863.7 734.6 847 555 869.3 821.7 133 2.12 1 FALSE 0.002853 0.05576 0.126 -250 105190 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DWHRPCLK [K].dWHRPcLk.[C] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 4 P63254 Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=2 P63254; Q6P3B4; A0A0G2JEK2; Q8C2N7 Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=2; Cysteine-rich protein 1 (Intestinal) OS=Mus musculus OX=10090 GN=Crip1 PE=2 SV=1; Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Crip1 PE=2 SV=1 0 3 3 0.4701 0 1 1 1 523.9621 1569.87174 1569.87242 -0.44 -0.00023 0/0 0 0 30742066 HCD 30 MS2 45.46144 1298.8 46.06 70.9794 21481 21481 21477 QEplus033719.raw F4 1323.9 1282.5 1535 1004.4 1347.4 1299.3 361 2.51 1 FALSE 0.001955 0.03381 0.199 -250 105198 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVGVEPAADGK [K].tVGVEPAADGk.[G] N-Term(TMT6plex); K11(TMT6plex) 2 Q5M9N5 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1 Q5M9N5; Q5M9J8 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1; 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1 0 2 2 0.7139 0 1 1 1 751.43573 1501.86418 1501.86263 1.03 0.00078 0/0 0 0 8252536 HCD 30 MS2 0 542.6 110 70.982 21482 21482 21477 QEplus033719.raw F4 591.5 490.7 614 440.1 561 558.2 435 4.16 1 FALSE 1.14E-05 5.22E-10 1.861 -250 105204 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYVVYDTR [K].dYVVYDTR.[L] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.7063 0 1 1 1 630.32666 1259.64604 1259.64693 -0.71 -0.00044 0/0 0 0 7973283 HCD 30 MS2 55.77259 997.2 110 70.9845 21483 21483 21477 QEplus033719.raw F4 1493.6 504.2 762.5 1110.5 1126.3 986.3 140 2.52 2 FALSE 0.0008718 0.01192 0.375 -250 105217 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVSSAIAK [K].aVSSAIAk.[L] N-Term(TMT6plex); K8(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 3 3 0.4313 0 1 1 1 402.26056 1204.76712 1204.76654 0.48 0.00019 0/0 0 0 7402866.5 HCD 30 MS2 13.67084 579.2 110 70.9894 21485 21485 21477 QEplus033719.raw F4 609.3 497.8 589.6 440.7 750.4 587.5 223 2.62 1 FALSE 0.0005556 0.008256 0.434 -250 105223 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLIPAANTGESK [K].hLIPAANTGESk.[V] N-Term(TMT6plex); K12(TMT6plex) 3 P62259 14-3-3 protein epsilon OS=Mus musculus OX=10090 GN=Ywhae PE=1 SV=1 F6WA09; P62259; Q8BPH1 14-3-3 protein epsilon (Fragment) OS=Mus musculus OX=10090 GN=Ywhae PE=1 SV=1; 14-3-3 protein epsilon OS=Mus musculus OX=10090 GN=Ywhae PE=1 SV=1; 14_3_3 domain-containing protein OS=Mus musculus OX=10090 GN=Ywhae PE=2 SV=1 0 2 2 0.6869 0 1 1 1 848.49414 1695.981 1695.97939 0.95 0.00081 0/0 0 0 5778958 HCD 30 MS2 20.25053 439.7 110 70.992 21486 21486 21477 QEplus033719.raw F4 489.6 369.7 467.1 386.1 503.6 422.3 398 4.12 1 FALSE 1.14E-05 3.88E-10 1.885 -250 105230 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGELVYTDTEAR [K].gGELVYTDTEAR.[D] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.734 0 1 1 1 770.39612 1539.78496 1539.78522 -0.17 -0.00013 0/0 0 0 4415224 HCD 30 MS2 0 396.9 110 70.9945 21487 21487 21477 QEplus033719.raw F4 413.8 330.9 422.5 361.8 405.6 446.8 193 5.3 2 FALSE 1.14E-05 2.30E-11 2.118 -250 105248 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HYEDFPK [R].hYEDFPk.[L] N-Term(TMT6plex); K7(TMT6plex) 1 Q91YR7 Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1 Q91YR7 Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1 0 3 3 0.5502 0 1 1 1 465.25665 1393.75541 1393.75162 2.71 0.00126 0/0 0 0 5873235 HCD 30 MS2 23.87358 935.7 110 71.0043 21490 21490 21488 QEplus033719.raw F4 988.5 738 1053.1 812.7 991.7 1029.9 356 2.69 1 FALSE 0.001514 0.02275 0.259 -250 105253 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YNVGVK [K].yNVGVk.[C] N-Term(TMT6plex); K6(TMT6plex) 9 O88844 Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2 Q3TJ51; Q0QER9; O88844; Q5HZJ8; A0A087WPT4; A0A087WRS9; D3YVY3; Q8C338; A0A087WRM4 Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; IDP (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1 0 2 2 0.4346 0 1 1 1 569.35577 1137.70427 1137.70322 0.93 0.00053 0/0 0 0 37841316 HCD 30 MS2 40.65655 1428.5 50.515 71.0066 21491 21491 21488 QEplus033719.raw F4 1359 1261.7 1650.4 1207.7 1484.2 1608.2 133 2.14 1 FALSE 0.005081 0.08758 0.041 -250 105263 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQSAILPQPK [K].rQSAILPQPk.[K] N-Term(TMT6plex); K10(TMT6plex) 6 A2BE93 Protein SET (Fragment) OS=Mus musculus OX=10090 GN=Set PE=1 SV=1 Q9CRT3; Q5U445; A2BE93; A2BE92; Q9EQU5-3; Q3T9S3 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Set PE=2 SV=3; cDNA sequence BC085271 OS=Mus musculus OX=10090 GN=BC085271 PE=2 SV=1; Protein SET (Fragment) OS=Mus musculus OX=10090 GN=Set PE=1 SV=1; Protein SET (Fragment) OS=Mus musculus OX=10090 GN=Set PE=1 SV=1; Isoform 3 of Protein SET OS=Mus musculus OX=10090 GN=Set; SET translocation OS=Mus musculus OX=10090 GN=Set PE=2 SV=1 1 3 3 0.6361 0 1 1 1 532.67175 1596.00071 1595.99973 0.61 0.00032 0/0 0 0 33258138 HCD 30 MS2 42.19619 592 24.855 71.0088 21492 21492 21488 QEplus033719.raw F4 569.2 557.4 718.2 521.1 523.7 662.6 164 3.6 1 FALSE 1.14E-05 2.24E-07 1.361 -250 105270 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHIAQLCEK [R].aHIAQLcEk.[A] N-Term(TMT6plex); C7(Carbamidomethyl); K9(TMT6plex) 3 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 Q80U89; Q68FD5; Q5SXR6 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1 0 3 3 0.677 0 1 1 1 509.96313 1527.87485 1527.87175 2.03 0.00103 0/0 0 0 26725168 HCD 30 MS2 52.19167 1346.9 37.503 71.0111 21493 21493 21488 QEplus033719.raw F4 1320.6 1140 1471.5 1199.4 1417.5 1532.3 351 3.87 1 FALSE 1.14E-05 0.0007165 0.691 -250 105287 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELYDAGVKR [R].eLYDAGVkR.[K] N-Term(TMT6plex); K8(TMT6plex) 5 Q542G9 Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1 Q9CZI7; B0V2N5; Q99KH3; Q542G9; Q3UCD3 Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1; Annexin (Fragment) OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa2 PE=2 SV=1 1 2 2 0.2197 0 1 1 1 754.95148 1508.89568 1508.8837 7.94 0.00599 0/0 0 0 4845694 HCD 30 MS2 0 374.9 110 71.0159 21495 21495 21488 QEplus033719.raw F4 367.9 392.3 429.8 351.2 343.6 364.5 398 2.64 1 FALSE 5.44E-05 0.002446 0.579 -250 105304 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNPTEPVGVVCR [K].tNPTEPVGVVcR.[V] N-Term(TMT6plex); C11(Carbamidomethyl) 7 Q91YN5 UDP-N-acetylhexosamine pyrophosphorylase OS=Mus musculus OX=10090 GN=Uap1 PE=1 SV=1 Q91YN5-2; Q91YN5; Q3UHZ7; Q3TAD4; A0A0R4J1F6; A0A0R4J085; Q91YN5-3 Isoform AGX1 of UDP-N-acetylhexosamine pyrophosphorylase OS=Mus musculus OX=10090 GN=Uap1; UDP-N-acetylhexosamine pyrophosphorylase OS=Mus musculus OX=10090 GN=Uap1 PE=1 SV=1; UDP-N-acetylhexosamine pyrophosphorylase OS=Mus musculus OX=10090 GN=Uap1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Uap1 PE=2 SV=1; UDP-N-acetylhexosamine pyrophosphorylase OS=Mus musculus OX=10090 GN=Uap1 PE=1 SV=1; UDP-N-acetylhexosamine pyrophosphorylase OS=Mus musculus OX=10090 GN=Uap1 PE=1 SV=1; Isoform 3 of UDP-N-acetylhexosamine pyrophosphorylase OS=Mus musculus OX=10090 GN=Uap1 0 2 2 0.7518 0 1 1 1 779.41583 1557.82439 1557.82564 -0.81 -0.00063 0/0 0 0 3529119 HCD 30 MS2 0 233.2 110 71.0235 21498 21498 21488 QEplus033719.raw F4 230.7 207.7 237.8 193.8 258.1 271 280 4.11 1 FALSE 1.14E-05 3.76E-10 1.888 -250 105308 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLEQTVK [K].nLEQTVk.[D] N-Term(TMT6plex); K7(TMT6plex) 8 Q5SX40; P13541 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 Q9ESW6; Q5SX40; P13541; B2RWX0; Q3UW38; B1AR69; M0QWL0; Q3TT35 "Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin_tail_1 domain-containing protein OS=Mus musculus OX=10090 GN=Myh13 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin, heavy polypeptide 13, skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Myh13 PE=4 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1" 0 2 2 0.3203 0 1 1 1 645.39575 1289.78423 1289.78292 1.01 0.00065 0/0 0 0 20857538 HCD 30 MS2 34.74101 1289 110 71.0308 21500 21500 21499 QEplus033719.raw F4 1394.3 584.1 1147 2071.2 653.4 1883.9 513 2.81 2 FALSE 0.0002419 0.00502 0.501 -250 105331 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLNDITKR [K].sLNDITkR.[E] N-Term(TMT6plex); K7(TMT6plex) 5 Q9DB20 "ATP synthase subunit O, mitochondrial OS=Mus musculus OX=10090 GN=Atp5po PE=1 SV=1" F7D3P8; Q3THG0; Q9DB20; A0A338P776; Q3TF25 "ATP synthase subunit O, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Atp5o PE=1 SV=8; ATP synthase peripheral stalk subunit OSCP OS=Mus musculus OX=10090 GN=Atp5o PE=2 SV=1; ATP synthase subunit O, mitochondrial OS=Mus musculus OX=10090 GN=Atp5po PE=1 SV=1; ATP synthase subunit O, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Atp5o PE=1 SV=1; ATP synthase peripheral stalk subunit OSCP OS=Mus musculus OX=10090 GN=Atp5o PE=2 SV=1" 1 3 3 0.5765 0 1 1 1 468.95782 1404.85892 1404.85748 1.02 0.00048 0/0 0 0 117755976 HCD 30 MS2 10.5215 891 13.654 71.0401 21504 21504 21499 QEplus033719.raw F4 887.1 656 1015.7 1078.3 638.2 1070.4 365 2.55 1 FALSE 9.73E-05 0.002995 0.558 -250 105340 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSAFDPK [K].dSAFDPk.[S] N-Term(TMT6plex); K7(TMT6plex) 4 P09541 Myosin light chain 4 OS=Mus musculus OX=10090 GN=Myl4 PE=1 SV=3 Q9CZ19; D6RFU4; A2A6Q8; P09541 Myosin light chain 4 OS=Mus musculus OX=10090 GN=Myl4 PE=1 SV=1; Myosin light chain 4 OS=Mus musculus OX=10090 GN=Myl4 PE=1 SV=1; Myosin light chain 4 (Fragment) OS=Mus musculus OX=10090 GN=Myl4 PE=1 SV=8; Myosin light chain 4 OS=Mus musculus OX=10090 GN=Myl4 PE=1 SV=3 0 2 2 0.4742 0 1 1 1 619.3457 1237.68413 1237.68287 1.01 0.00063 0/0 0 0 61797084 HCD 30 MS2 15.28463 863.4 15.906 71.0423 21505 21505 21499 QEplus033719.raw F4 1149.2 276.6 907.6 1249.3 288.4 1309.2 348 2.13 1 FALSE 0.001284 0.01749 0.305 -250 105354 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AELDDTPMR [K].aELDDTPMR.[G] N-Term(TMT6plex) 2 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q8VIJ6; Q3TZL2 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1" 0 2 2 0.6009 0 1 1 1 638.82269 1276.63811 1276.64047 -1.85 -0.00118 0/0 0 0 19333912 HCD 30 MS2 39.39912 1062.7 89.728 71.0469 21507 21507 21499 QEplus033719.raw F4 1010.6 1057.3 1173.8 783.4 1347.5 1003.8 126 2.33 1 FALSE 1.14E-05 2.39E-05 0.975 -250 105360 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSELDDR [K].lSELDDR.[A] N-Term(TMT6plex) 9 B0QZN5; P63024 Synaptobrevin-2 OS=Mus musculus OX=10090 GN=Vamp2 PE=1 SV=1;Vesicle-associated membrane protein 3 OS=Mus musculus OX=10090 GN=Vamp3 PE=1 SV=1 B0QZN5; A0A0N4SUV3; D3YTU0; P63024; Q9CXX2; P63044; O35619; Q62442; Q62442-2 Synaptobrevin-2 OS=Mus musculus OX=10090 GN=Vamp2 PE=1 SV=1; Vesicle-associated membrane protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Vamp1 PE=1 SV=1; Vesicle-associated membrane protein 1 OS=Mus musculus OX=10090 GN=Vamp1 PE=1 SV=1; Vesicle-associated membrane protein 3 OS=Mus musculus OX=10090 GN=Vamp3 PE=1 SV=1; V-SNARE coiled-coil homology domain-containing protein OS=Mus musculus OX=10090 GN=Vamp1 PE=2 SV=1; Vesicle-associated membrane protein 2 OS=Mus musculus OX=10090 GN=Vamp2 PE=1 SV=2; Synaptobrevin-2 OS=Mus musculus OX=10090 GN=Vamp2 PE=2 SV=1; Vesicle-associated membrane protein 1 OS=Mus musculus OX=10090 GN=Vamp1 PE=1 SV=1; Isoform 2 of Vesicle-associated membrane protein 1 OS=Mus musculus OX=10090 GN=Vamp1 0 2 2 0.3225 0 1 1 1 538.79309 1076.57891 1076.57852 0.36 0.00019 0/0 0 0 12057325 HCD 30 MS2 55.98081 1510.6 110 71.0494 21508 21508 21499 QEplus033719.raw F4 1597.5 1117.6 1564.5 1283.7 1671 1829.6 252 2.76 2 FALSE 5.44E-05 0.002109 0.593 -250 105377 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYEGQIEK [K].aYEGQIEk.[M] N-Term(TMT6plex); K8(TMT6plex) 3 Q3ULS2 Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc2 PE=2 SV=1 Q3ULS2; Q6IR05; Q8CG48 Structural maintenance of chromosomes protein OS=Mus musculus OX=10090 GN=Smc2 PE=2 SV=1; Smc2 protein (Fragment) OS=Mus musculus OX=10090 GN=Smc2 PE=2 SV=1; Structural maintenance of chromosomes protein 2 OS=Mus musculus OX=10090 GN=Smc2 PE=1 SV=2 0 2 2 0.4731 0 1 1 1 698.40094 1395.7946 1395.7884 4.44 0.0031 0/0 0 0 5631399.5 HCD 30 MS2 53.64796 533.8 110 71.059 21511 21511 21510 QEplus033719.raw F4 522.5 592 485.7 304.5 887.6 410.6 374 3.53 1 FALSE 1.14E-05 1.54E-05 1.012 -250 105383 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTIAQQVK [R].tTIAQQVk.[G] N-Term(TMT6plex); K8(TMT6plex) 1 P46460 Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Nsf PE=1 SV=2 P46460 Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Nsf PE=1 SV=2 0 2 2 0.4414 0 1 1 1 673.92303 1346.83879 1346.84077 -1.47 -0.00099 0/0 0 0 5417263 HCD 30 MS2 28.31543 631.8 110 71.0615 21512 21512 21510 QEplus033719.raw F4 625.8 567.8 704 525.5 699.5 668.1 335 3.33 1 FALSE 1.14E-05 6.07E-05 0.898 -250 105393 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPLAQMEEERR [K].sPLAQMEEERR.[E] N-Term(TMT6plex) 6 E9Q1G8 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2 E9Q1G8; Q8C2A3; E9Q9F5; Q5DTS3; Q3UNN1; O55131 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin-7 (Fragment) OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin-7 OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=1 1 3 3 0.6259 0 1 1 1 525.61041 1574.81668 1574.81581 0.56 0.00029 0/0 0 0 76989280 HCD 30 MS2 28.69932 663.2 18.158 71.0637 21513 21513 21510 QEplus033719.raw F4 668.8 570.4 749.1 544.9 786 659.7 220 5.32 1 FALSE 1.14E-05 5.94E-13 2.42 -250 105410 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGIDLGTTGR [R].tGIDLGTTGR.[L] N-Term(TMT6plex) 6 Q3UXT6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1 E9Q8F0; Q3UXT6; Q8VH51; Q0VGU9; F7AA45; Q8VH51-2 RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1; RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2; Rbm39 protein OS=Mus musculus OX=10090 GN=Rbm39 PE=2 SV=1; RNA-binding protein 39 (Fragment) OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=1; Isoform 2 of RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 0 2 2 0.6176 0 1 1 1 610.34644 1219.68559 1219.68438 0.99 0.00061 0/0 0 0 40536696 HCD 30 MS2 11.61927 856.4 56.603 71.0683 21515 21515 21510 QEplus033719.raw F4 853.7 842.7 983.6 598.5 1003.9 855.9 399 3.74 1 FALSE 1.14E-05 3.66E-07 1.32 -250 105430 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEIYRPHK [K].mEIYRPHk.[A] N-Term(TMT6plex); K8(TMT6plex) 4 A0A0R4J008; O09106 Histone deacetylase 2 OS=Mus musculus OX=10090 GN=Hdac2 PE=1 SV=1;Histone deacetylase 1 OS=Mus musculus OX=10090 GN=Hdac1 PE=1 SV=1 A0A0R4J008; Q8BQ10; O09106; P70288 Histone deacetylase 2 OS=Mus musculus OX=10090 GN=Hdac2 PE=1 SV=1; Histone deacetylase OS=Mus musculus OX=10090 GN=Hdac2 PE=1 SV=1; Histone deacetylase 1 OS=Mus musculus OX=10090 GN=Hdac1 PE=1 SV=1; Histone deacetylase 2 OS=Mus musculus OX=10090 GN=Hdac2 PE=1 SV=1 0 4 4 0.5347 0 1 1 1 383.72705 1531.88637 1531.88192 2.9 0.00111 0/0 0 0 11586033 HCD 30 MS2 34.08398 481.4 67.077 71.0729 21517 21517 21510 QEplus033719.raw F4 413.6 424.1 570.2 389.7 535.9 554.6 480 3.31 2 FALSE 1.14E-05 0.0001698 0.813 -250 105452 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQSAILPQPK [K].rQSAILPQPk.[K] N-Term(TMT6plex); K10(TMT6plex) 6 A2BE93 Protein SET (Fragment) OS=Mus musculus OX=10090 GN=Set PE=1 SV=1 Q9CRT3; Q5U445; A2BE93; A2BE92; Q9EQU5-3; Q3T9S3 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Set PE=2 SV=3; cDNA sequence BC085271 OS=Mus musculus OX=10090 GN=BC085271 PE=2 SV=1; Protein SET (Fragment) OS=Mus musculus OX=10090 GN=Set PE=1 SV=1; Protein SET (Fragment) OS=Mus musculus OX=10090 GN=Set PE=1 SV=1; Isoform 3 of Protein SET OS=Mus musculus OX=10090 GN=Set; SET translocation OS=Mus musculus OX=10090 GN=Set PE=2 SV=1 1 4 4 0.5423 0 1 1 1 399.75562 1596.00063 1595.99973 0.56 0.00022 0/0 0 0 4160818.5 HCD 30 MS2 34.91748 430.6 110 71.0805 21520 21520 21510 QEplus033719.raw F4 486.6 365.2 470.7 297.1 488.7 475.4 161 3.43 1 FALSE 0.001101 0.01428 0.342 -250 105459 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVSSAIAK [K].aVSSAIAk.[L] N-Term(TMT6plex); K8(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.3003 0 1 1 1 602.88763 1204.76799 1204.76654 1.2 0.00072 0/0 0 0 72385992 HCD 30 MS2 22.89463 804.2 16.934 71.0878 21522 21522 21521 QEplus033719.raw F4 820.1 716.2 858.8 629.9 1032.5 767.5 223 3.33 1 FALSE 1.14E-05 0.0001859 0.806 -250 105484 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSDFDCELR [K].gSDFDcELR.[L] N-Term(TMT6plex); C6(Carbamidomethyl) 18 Q5FWJ5 Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 P61979-3; Q3U9Q3; A0A286YEC4; H3BJS9; A0A286YCM2; Q3TUA1; Q5FWJ5; H3BKD0; H3BK96; P61979; H3BLL4; A0A286YDM3; B2M1R6; Q3TG17; Q3U6X2; Q3TL71; Q3TJ38; H3BKI8 Isoform 3 of Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1 0 2 2 0.7333 0 1 1 1 664.31183 1327.61638 1327.61498 1.05 0.0007 0/0 0 0 35092772 HCD 30 MS2 6.3297 764.6 48.692 71.0946 21525 21525 21521 QEplus033719.raw F4 797.4 754.7 839.6 544.8 909.1 741.9 35 3.45 1 FALSE 1.14E-05 4.72E-05 0.919 -250 105516 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VFGGTVHKK [K].vFGGTVHkk.[S] N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex) 1 B2RRH9 Glutamine amidotransferase OS=Mus musculus OX=10090 GN=Gmps PE=1 SV=1 B2RRH9 Glutamine amidotransferase OS=Mus musculus OX=10090 GN=Gmps PE=1 SV=1 1 4 4 0.5745 0 1 1 1 415.76843 1660.0519 1660.05132 0.35 0.00014 0/0 0 0 13821496 HCD 30 MS2 51.2673 549.5 57.437 71.1061 21530 21530 21521 QEplus033719.raw F4 693.6 399.4 554.1 476.1 651.3 522.8 316 3.69 1 FALSE 1.14E-05 7.96E-05 0.876 -250 105531 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLDQVEK [K].kLDQVEk.[E] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 5 Q9DB20 "ATP synthase subunit O, mitochondrial OS=Mus musculus OX=10090 GN=Atp5po PE=1 SV=1" F6XVM5; Q3THG0; Q9DB20; A0A338P776; Q3TF25 "ATP synthase subunit O, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Atp5o PE=1 SV=1; ATP synthase peripheral stalk subunit OSCP OS=Mus musculus OX=10090 GN=Atp5o PE=2 SV=1; ATP synthase subunit O, mitochondrial OS=Mus musculus OX=10090 GN=Atp5po PE=1 SV=1; ATP synthase subunit O, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Atp5o PE=1 SV=1; ATP synthase peripheral stalk subunit OSCP OS=Mus musculus OX=10090 GN=Atp5o PE=2 SV=1" 1 2 2 0.3771 0 1 1 1 773.99353 1546.97978 1546.97715 1.7 0.00131 0/0 0 0 9290507 HCD 30 MS2 9.163011 519.8 110 71.116 21533 21533 21532 QEplus033719.raw F4 543.7 310.8 512.4 716 428.3 607.7 314 2.36 1 FALSE 0.001318 0.01806 0.299 -250 105554 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIVCNTK [R].vIVcNTk.[Q] N-Term(TMT6plex); C4(Carbamidomethyl); K7(TMT6plex) 3 Q3V471 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1 Q3V471; P16110; Q8C253 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1; Galectin-3 OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=3; Galectin OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=1 0 2 2 0.4228 0 1 1 1 646.39453 1291.78179 1291.78081 0.75 0.00049 0/0 0 0 43813016 HCD 30 MS2 9.84924 951.5 44.209 71.123 21536 21536 21532 QEplus033719.raw F4 992.7 995.1 1003.4 826.4 905.6 986 347 2.98 1 FALSE 0.0006383 0.00976 0.408 -250 105564 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAYVPSK [R].eAYVPSk.[Q] N-Term(TMT6plex); K7(TMT6plex) 1 Q9WUM3 Coronin-1B OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1 Q9WUM3 Coronin-1B OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1 0 2 2 0.4493 0 1 1 1 626.36896 1251.73064 1251.73491 -3.41 -0.00214 0/0 0 0 37247332 HCD 30 MS2 40.26228 1090.3 28.127 71.1253 21537 21537 21532 QEplus033719.raw F4 1122.1 1128 1183.3 692.4 1528.8 886.9 348 2.27 1 FALSE 0.001125 0.01495 0.333 -250 105582 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHIAQLCEK [R].aHIAQLcEk.[A] N-Term(TMT6plex); C7(Carbamidomethyl); K9(TMT6plex) 3 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 Q80U89; Q68FD5; Q5SXR6 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1 0 2 2 0.5188 0 1 1 1 764.44122 1527.87517 1527.87175 2.24 0.00171 0/0 0 0 8631308 HCD 30 MS2 0 420.2 110 71.1326 21540 21540 21532 QEplus033719.raw F4 386.5 408.8 491.4 352 436.5 446.1 351 3.72 1 FALSE 1.14E-05 1.52E-06 1.203 -250 105601 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPDSMVTNSSTENEA [R].kPDSMVTNSSTENEA.[-] N-Term(TMT6plex); K1(TMT6plex) 2 Q6PDL0 Cytoplasmic dynein 1 light intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1li2 PE=1 SV=2 A0A1D5RMC1; Q6PDL0 Dynein light intermediate chain (Fragment) OS=Mus musculus OX=10090 GN=Dync1li2 PE=1 SV=1; Cytoplasmic dynein 1 light intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1li2 PE=1 SV=2 0 3 3 0.772 0 1 1 1 690.01508 2068.03067 2068.02687 1.84 0.00127 0/0 0 0 5852048.5 HCD 30 MS2 46.98249 338.4 110 71.1376 21542 21542 21532 QEplus033719.raw F4 320.5 329.4 365.4 243.3 440.8 330.9 209 3.64 1 FALSE 1.14E-05 1.11E-07 1.418 -250 105616 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPSQEPSAPGKAEAVGEQAR [R].sPSQEPSAPGkAEAVGEQAR.[G] N-Term(TMT6plex); K11(TMT6plex) 2 Q8JZQ9 Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=1 SV=1 Q8JZQ9; Q8CIJ3 Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=2 SV=1 1 3 3 0.7369 0 1 1 1 818.771 2454.29844 2454.29889 -0.18 -0.00015 0/0 0 0 2521702.75 HCD 30 MS2 0 216.9 110 71.1474 21545 21545 21543 QEplus033719.raw F4 202.8 207.5 286.5 178.3 215.5 210.8 431 4.98 1 FALSE 1.14E-05 9.74E-14 2.569 -250 105625 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVGVEPAADGK [K].tVGVEPAADGk.[G] N-Term(TMT6plex); K11(TMT6plex) 2 Q5M9N5 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1 Q5M9N5; Q5M9J8 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1; 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1 0 3 3 0.7318 0 1 1 1 501.2933 1501.86536 1501.86263 1.82 0.00091 0/0 0 0 84674912 HCD 30 MS2 12.24919 702.7 19.879 71.1519 21547 21547 21543 QEplus033719.raw F4 726.7 578.2 784.1 560.6 755.1 811.5 443 3.84 1 FALSE 1.14E-05 4.70E-07 1.3 -250 105630 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALQLEEER [K].aLQLEEER.[R] N-Term(TMT6plex) 5 Q4KML7 Ezrin OS=Mus musculus OX=10090 GN=Ezr PE=1 SV=1 Q8CBU4; Q3UXR4; Q4KML7; Q3TCP5; Q3UL48 FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; Ezrin OS=Mus musculus OX=10090 GN=Ezr PE=1 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1 0 2 2 0.2888 0 1 1 1 608.841 1216.67473 1216.67348 1.03 0.00062 0/0 0 0 32929600 HCD 30 MS2 7.253502 629.7 44.302 71.1542 21548 21548 21543 QEplus033719.raw F4 573.4 663 690.9 552.8 661.5 636.4 348 3.29 1 FALSE 1.14E-05 0.0001095 0.85 -250 105645 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RITASEALK [K].rITASEALk.[H] N-Term(TMT6plex); K9(TMT6plex) 11 E9Q1W0 Calcium/calmodulin-dependent protein kinase OS=Mus musculus OX=10090 GN=Camk2d PE=1 SV=2 Q8CCM0; E9Q1W0; A0A0G2JGS4; Q6PHZ2-2; E9Q1V9; Q6PHZ2; Q8C8X9; Q8C4I3; Q6PHZ2-4; Q6PHZ2-5; E9Q1T1 Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Mus musculus OX=10090 GN=Camk2d PE=1 SV=1; Calcium/calmodulin-dependent protein kinase OS=Mus musculus OX=10090 GN=Camk2d PE=1 SV=2; Calcium/calmodulin-dependent protein kinase OS=Mus musculus OX=10090 GN=Camk2d PE=1 SV=1; Isoform 2 of Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Mus musculus OX=10090 GN=Camk2d; Calcium/calmodulin-dependent protein kinase OS=Mus musculus OX=10090 GN=Camk2d PE=1 SV=2; Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Mus musculus OX=10090 GN=Camk2d PE=1 SV=1; Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Camk2d PE=2 SV=1; Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Camk2d PE=2 SV=1; Isoform 3 of Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Mus musculus OX=10090 GN=Camk2d; Isoform 4 of Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Mus musculus OX=10090 GN=Camk2d; Calcium/calmodulin-dependent protein kinase OS=Mus musculus OX=10090 GN=Camk2d PE=1 SV=1 1 3 3 0.3718 0 1 1 1 482.97342 1446.9057 1446.90443 0.88 0.00042 0/0 0 0 11782015 HCD 30 MS2 66.05059 1470.9 91.773 71.1587 21550 21550 21543 QEplus033719.raw F4 1524.9 1193 1572.5 1409.8 1455.9 1669.2 277 3.9 1 FALSE 1.14E-05 9.02E-05 0.866 -250 105648 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HITLDK [R].hITLDk.[T] N-Term(TMT6plex); K6(TMT6plex) 2 Q99J77 Sialic acid synthase OS=Mus musculus OX=10090 GN=Nans PE=1 SV=1 Q99J77; Q3TFB5 Sialic acid synthase OS=Mus musculus OX=10090 GN=Nans PE=1 SV=1; NeuB domain-containing protein OS=Mus musculus OX=10090 GN=Nans PE=2 SV=1 0 3 3 0.3322 0 1 1 1 395.58502 1184.74051 1184.74033 0.15 0.00006 0/0 0 0 10462539 HCD 30 MS2 15.16041 668.6 110 71.1612 21551 21551 21543 QEplus033719.raw F4 766.9 661.5 681.9 594.2 836.1 470.8 249 3.01 1 FALSE 0.001762 0.03013 0.216 -250 105658 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKEEIER [R].lkEEIER.[R] N-Term(TMT6plex); K2(TMT6plex) 8 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; Q3UGC3; E9QA15; E9Q0M9; D3Z6I7; S4R1T7; E9QA16; F6QLP8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 1 2 2 0.1063 0 1 1 2 687.92346 1374.83965 1374.83569 2.88 0.00198 0/0 0 0 10200214 HCD 30 MS2 76.48765 922.8 101.432 71.1636 21552 21552 21543 QEplus033719.raw F4 887.4 923.5 1012 728.5 1096.3 889.3 407 1.6 1 FALSE 0.002628 0.05196 0.136 -250 105665 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTYSTEPNNLK [K].qTYSTEPNNLk.[A] N-Term(TMT6plex); K11(TMT6plex) 2 Q5M9N5 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1 Q5M9N5; Q5M9J8 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1; 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1 0 2 2 0.7119 0 1 1 1 876.98175 1752.95622 1752.95323 1.71 0.00149 0/0 0 0 6650697.5 HCD 30 MS2 0 506.2 110 71.1661 21553 21553 21543 QEplus033719.raw F4 513.2 486.5 592.8 437.7 493.8 513.1 425 4.79 1 FALSE 1.14E-05 1.61E-10 1.958 -250 105687 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPVQSGPLK [K].kPVQSGPLk.[I] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 15 Q8CAQ8; A0A0U1RP81 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1;MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q8CAQ8-4; Q3U7N2; E9PVS5; Q8CAQ8; E9QAY6; Q8CAQ8-2; Q3TZK4; A0A0U1RP81; Q3TVZ5; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5; A0A1B0GX08 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; Isoform 4 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 0 3 3 0.5773 0 1 1 1 547.69421 1641.06809 1641.06664 0.88 0.00048 0/0 0 0 30053482 HCD 30 MS2 20.51212 1108.5 44.723 71.1805 21558 21558 21554 QEplus033719.raw F4 1115.2 862.8 1154.3 1089 1166.8 1262.8 92 4.14 2 FALSE 1.14E-05 8.20E-08 1.444 -250 105695 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTYSTEPNNLK [K].qTYSTEPNNLk.[A] N-Term(TMT6plex); K11(TMT6plex) 2 Q5M9N5 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1 Q5M9N5; Q5M9J8 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1; 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1 0 3 3 0.5381 0 1 1 1 584.98981 1752.95487 1752.95323 0.93 0.00054 0/0 0 0 29461032 HCD 30 MS2 36.31685 873.2 55.301 71.1827 21559 21559 21554 QEplus033719.raw F4 846.2 768.2 999.7 762.7 1000.4 861.8 437 4.07 1 FALSE 1.14E-05 2.05E-05 0.988 -250 105699 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITHQEMIK [K].iTHQEMIk.[G] N-Term(TMT6plex); K8(TMT6plex) 1 Q9WVQ5 Methylthioribulose-1-phosphate dehydratase OS=Mus musculus OX=10090 GN=Apip PE=1 SV=1 Q9WVQ5 Methylthioribulose-1-phosphate dehydratase OS=Mus musculus OX=10090 GN=Apip PE=1 SV=1 0 3 3 0.5207 0 1 1 1 486.62411 1457.85779 1457.85504 1.89 0.00092 0/0 0 0 17499744 HCD 30 MS2 46.67544 1276.2 106.604 71.1852 21560 21560 21554 QEplus033719.raw F4 1548.4 1070.6 1250.7 1099.4 1379.5 1308.3 297 3.63 1 FALSE 1.14E-05 0.0006067 0.706 -250 105706 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLIPAANTGESK [K].hLIPAANTGESk.[V] N-Term(TMT6plex); K12(TMT6plex) 3 P62259 14-3-3 protein epsilon OS=Mus musculus OX=10090 GN=Ywhae PE=1 SV=1 F6WA09; P62259; Q8BPH1 14-3-3 protein epsilon (Fragment) OS=Mus musculus OX=10090 GN=Ywhae PE=1 SV=1; 14-3-3 protein epsilon OS=Mus musculus OX=10090 GN=Ywhae PE=1 SV=1; 14_3_3 domain-containing protein OS=Mus musculus OX=10090 GN=Ywhae PE=2 SV=1 0 4 4 0.594 0 1 1 1 424.75049 1695.98012 1695.97939 0.43 0.00018 0/0 0 0 11472877 HCD 30 MS2 36.05954 680.8 84.385 71.1874 21561 21561 21554 QEplus033719.raw F4 871.8 487.6 674.1 658.3 686.4 706.7 407 4.68 1 FALSE 1.14E-05 2.75E-06 1.154 -250 105723 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAYVPSK [R].eAYVPSk.[Q] N-Term(TMT6plex); K7(TMT6plex) 1 Q9WUM3 Coronin-1B OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1 Q9WUM3 Coronin-1B OS=Mus musculus OX=10090 GN=Coro1b PE=1 SV=1 0 3 3 0.3347 0 1 1 1 417.91666 1251.73542 1251.73491 0.4 0.00017 0/0 0 0 8624197 HCD 30 MS2 54.61357 873 110 71.1921 21563 21563 21554 QEplus033719.raw F4 892.2 698.6 965 689.8 1011.4 980.7 372 2.45 1 FALSE 0.002249 0.04428 0.16 -250 105732 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVCDIPPR [K].tAVcDIPPR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 9 Q7TMM9; P99024; P68372; Q9CWF2 Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1;Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1;Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1;Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1 Q7TMM9; Q9D6F9; Q62363; Q80ZV2; Q9DCR1; P99024; P68372; Q99J49; Q9CWF2 "Tubulin beta-2A chain OS=Mus musculus OX=10090 GN=Tubb2a PE=1 SV=1; Tubulin beta-4A chain OS=Mus musculus OX=10090 GN=Tubb4a PE=1 SV=3; Beta-tubulin gene M-beta-2, 3' end (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubb5 protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb4b PE=2 SV=2; Tubulin beta-5 chain OS=Mus musculus OX=10090 GN=Tubb5 PE=1 SV=1; Tubulin beta-4B chain OS=Mus musculus OX=10090 GN=Tubb4b PE=1 SV=1; Tubb2a protein (Fragment) OS=Mus musculus OX=10090 GN=Tubb2a PE=2 SV=1; Tubulin beta-2B chain OS=Mus musculus OX=10090 GN=Tubb2b PE=1 SV=1" 0 2 2 0.6489 0 1 1 1 629.34399 1257.68071 1257.68227 -1.24 -0.00078 0/0 0 0 5261484 HCD 30 MS2 25.68651 773.3 110 71.1946 21564 21564 21554 QEplus033719.raw F4 816 608.3 655.7 514.2 1214 831.3 217 2.62 4 FALSE 1.14E-05 0.0007326 0.689 -250 105739 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETTFEPK [K].eTTFEPk.[K] N-Term(TMT6plex); K7(TMT6plex) 4 A0A571BEN1 "Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1" A0A571BEN1; Q6P6L5; F6RQD1; D3YU50 "Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1; Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1; Myosin-binding protein C, slow-type (Fragment) OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1; Myosin-binding protein C, slow-type OS=Mus musculus OX=10090 GN=Mybpc1 PE=1 SV=1" 0 2 2 0.4686 0 1 1 1 655.37195 1309.73662 1309.74039 -2.88 -0.00188 0/0 0 0 6581904.5 HCD 30 MS2 0 641.7 110 71.202 21566 21566 21565 QEplus033719.raw F4 784.7 314.9 500 1048.9 395.9 806 341 2.71 1 FALSE 0.00079 0.01092 0.39 -250 105765 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIVCNTK [R].vIVcNTk.[Q] N-Term(TMT6plex); C4(Carbamidomethyl); K7(TMT6plex) 3 Q3V471 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1 Q3V471; P16110; Q8C253 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1; Galectin-3 OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=3; Galectin OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=1 0 3 3 0.4177 0 1 1 1 431.26538 1291.78159 1291.78081 0.6 0.00026 0/0 0 0 23842592 HCD 30 MS2 50.10326 645.4 35.394 71.209 21569 21569 21565 QEplus033719.raw F4 715.5 514.7 648.9 528.9 669.4 794.8 347 2.49 1 FALSE 0.003464 0.06713 0.095 -250 105785 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATVTPSPVK [K].aTVTPSPVk.[G] N-Term(TMT6plex); K9(TMT6plex) 2 A0A087WRY3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Mus musculus OX=10090 GN=Nucks1 PE=1 SV=1 A0A087WRY3; Q80XU3 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Mus musculus OX=10090 GN=Nucks1 PE=1 SV=1; Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Mus musculus OX=10090 GN=Nucks1 PE=1 SV=1 0 3 3 0.3421 0 1 1 1 453.28915 1357.85291 1357.84552 5.44 0.00246 0/0 0 0 16801142 HCD 30 MS2 55.71093 879.3 58.127 71.2135 21571 21571 21565 QEplus033719.raw F4 889.8 842.5 994.8 651.6 1023.2 874.1 297 2.66 1 FALSE 0.002688 0.05352 0.132 -250 105795 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEYTK [K].kLEYTk.[N] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 9 Q9JLM8 Serine/threonine-protein kinase DCLK1 OS=Mus musculus OX=10090 GN=Dclk1 PE=1 SV=1 Q9JLM8; Q9JLM8-2; Q80VB6; Q9JLM7; A0A0G2JGQ6; A3KN70; Q8CHG1; Q8BRN4; Q8VDT3 Serine/threonine-protein kinase DCLK1 OS=Mus musculus OX=10090 GN=Dclk1 PE=1 SV=1; Isoform 2 of Serine/threonine-protein kinase DCLK1 OS=Mus musculus OX=10090 GN=Dclk1; Dclk1 protein OS=Mus musculus OX=10090 GN=Dclk1 PE=1 SV=1; Doublecortin-like protein OS=Mus musculus OX=10090 GN=Dclk1 PE=2 SV=1; Serine/threonine-protein kinase DCLK1 OS=Mus musculus OX=10090 GN=Dclk1 PE=1 SV=1; Dclk1 protein OS=Mus musculus OX=10090 GN=Dclk1 PE=2 SV=1; MKIAA0369 protein (Fragment) OS=Mus musculus OX=10090 GN=Dclk1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dclk1 PE=2 SV=1; Dclk1 protein OS=Mus musculus OX=10090 GN=Dclk1 PE=2 SV=1 1 3 3 0.3967 0 1 1 1 490.31665 1468.9354 1468.93423 0.8 0.00039 0/0 0 0 16422775 HCD 30 MS2 51.77375 1538.2 87.404 71.2158 21572 21572 21565 QEplus033719.raw F4 1905.9 713.3 1540.9 1952.8 1168.9 1947.1 121 2.42 1 FALSE 0.002714 0.05405 0.13 -250 105819 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSTESEVLK [R].tSTESEVLk.[Y] N-Term(TMT6plex); K9(TMT6plex) 5 Q3TW74 "C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1" Q8BY49; Q8BXX7; Q3UZH3; Q3TW74; Q922D8 "Methenyltetrahydrofolate cyclohydrolase (Fragment) OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=2; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=1 SV=4" 0 2 2 0.5191 0 1 1 1 726.42084 1451.8344 1451.83575 -0.93 -0.00067 0/0 0 0 5661593 HCD 30 MS2 0 494.3 110 71.2229 21575 21575 21565 QEplus033719.raw F4 525.3 448.6 513.3 444.5 541.6 492.4 401 3.41 1 FALSE 1.14E-05 0.0003866 0.744 -250 105845 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARQEEVYSELQAR [R].aRQEEVYSELQAR.[E] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.7358 0 1 1 1 603.32227 1807.95224 1807.94999 1.25 0.00075 0/0 0 0 49231488 HCD 30 MS2 35.02214 581.8 35.786 71.2347 21579 21579 21576 QEplus033719.raw F4 593.6 485.5 647.8 472.7 661 630.2 372 5.64 2 FALSE 1.14E-05 1.85E-14 2.706 -250 105877 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFIDHSPK [K].eFIDHSPk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 Q8BU20 Complex I-SGDH OS=Mus musculus OX=10090 GN=Ndufb5 PE=2 SV=1 Q8BU20; Q9CQH3; D3Z568 "Complex I-SGDH OS=Mus musculus OX=10090 GN=Ndufb5 PE=2 SV=1; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial OS=Mus musculus OX=10090 GN=Ndufb5 PE=1 SV=1; Complex I-SGDH OS=Mus musculus OX=10090 GN=Ndufb5 PE=1 SV=1" 0 3 3 0.5335 0 1 1 1 477.60629 1430.80432 1430.80439 -0.04 -0.00002 0/0 0 0 9739903 HCD 30 MS2 17.74142 1132.5 110 71.2442 21583 21583 21576 QEplus033719.raw F4 1103.3 921.1 1245 1080.5 1058.7 1386.3 339 3.13 1 FALSE 5.44E-05 0.001889 0.604 -250 105881 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQVANSAFVER [K].eQVANSAFVER.[V] N-Term(TMT6plex) 4 Q71LX8 Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q811H6; Q80YC2; Q71LX8; E9Q0C3 Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; Heat shock protein HSP 90-beta (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 0 2 2 0.7329 0 1 1 1 739.89447 1478.78166 1478.78007 1.08 0.0008 0/0 0 0 9039202 HCD 30 MS2 0 576.6 110 71.2467 21584 21584 21576 QEplus033719.raw F4 626.8 430.4 623.4 514.9 609.9 654.3 303 4.53 1 FALSE 1.14E-05 5.19E-10 1.861 -250 105906 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LHDVLHSDK [R].lHDVLHSDk.[K] N-Term(TMT6plex); K9(TMT6plex) 3 P49615 Cyclin-dependent-like kinase 5 OS=Mus musculus OX=10090 GN=Cdk5 PE=1 SV=1 P49615; Q6LEQ3; A0A0G2JDL3 Cyclin-dependent-like kinase 5 OS=Mus musculus OX=10090 GN=Cdk5 PE=1 SV=1; Cyclin-dependent kinase 5 (Fragment) OS=Mus musculus domesticus OX=10092 PE=3 SV=1; Cyclin-dependent-like kinase 5 OS=Mus musculus OX=10090 GN=Cdk5 PE=1 SV=1 0 4 4 0.5866 0 1 1 1 381.22479 1521.87734 1521.87895 -1.06 -0.0004 0/0 0 0 4090277 HCD 30 MS2 76.7328 327 110 71.2615 21589 21589 21587 QEplus033719.raw F4 340.4 245.9 370.8 263.7 341 400 468 3.87 1 FALSE 1.14E-05 1.19E-05 1.033 -250 105914 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YNHIDESEMK [K].yNHIDESEMk.[K] N-Term(TMT6plex); K10(TMT6plex) 4 Q61699 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2 E9Q0U7; Q61699; Q8C6H1; Q61699-2 Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=1; Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsph1 PE=2 SV=1; Isoform HSP105-beta of Heat shock protein 105 kDa OS=Mus musculus OX=10090 GN=Hsph1 0 3 3 0.7294 0 1 1 1 575.2962 1723.87406 1723.87254 0.88 0.00051 0/0 0 0 21941420 HCD 30 MS2 29.13428 1015.6 71.973 71.266 21591 21591 21587 QEplus033719.raw F4 1027.9 749.2 1085.9 948.6 985.4 1296.7 211 4.62 1 FALSE 1.14E-05 9.76E-09 1.619 -250 105920 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLMHGK [R].lLMHGk.[E] N-Term(TMT6plex); K6(TMT6plex) 19 Q61990; P60335; P57722 Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1;Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1;Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3 A0A2R8VHY9; Q61990; Q61990-3; A0A2R8VI71; A0A2R8VHI3; A0A2R8VI25; Q3TF69; B2M1R7; A0A2R8VHN3; Q61990-2; A0A2R8W6L5; Q8CFQ6; P60335; Q3TT81; P57722; A0A2R8VI12; A0A2R8VHP9; P57722-2; E9Q7D8 Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 3 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pcbp2 PE=2 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Pcbp3 protein OS=Mus musculus OX=10090 GN=Pcbp3 PE=2 SV=1; Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3; Poly(rC)-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Poly(rC)-binding protein 2 OS=Mus musculus OX=10090 GN=Pcbp2 PE=1 SV=1; Isoform 2 of Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3; Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=1 0 3 3 0.2415 0 1 1 1 386.24838 1156.73059 1156.72766 2.54 0.00098 0/0 0 0 15144128 HCD 30 MS2 24.68481 565.9 75.305 71.2683 21592 21592 21587 QEplus033719.raw F4 478.6 475.6 631.9 459.8 645.9 703.7 178 2.94 3 FALSE 0.002603 0.05151 0.138 -250 105929 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IYHLQSK [K].iYHLQSk.[V] N-Term(TMT6plex); K7(TMT6plex) 7 P53810 Phosphatidylinositol transfer protein alpha isoform OS=Mus musculus OX=10090 GN=Pitpna PE=1 SV=2 J3QPW1; Q3TIQ3; F8WGG5; J3QQ30; P53810; Q3TGI6; Q3UE53 Phosphatidylinositol transfer protein alpha isoform OS=Mus musculus OX=10090 GN=Pitpna PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Pitpna PE=2 SV=1; Phosphatidylinositol transfer protein alpha isoform OS=Mus musculus OX=10090 GN=Pitpna PE=1 SV=1; Phosphatidylinositol transfer protein alpha isoform OS=Mus musculus OX=10090 GN=Pitpna PE=1 SV=1; Phosphatidylinositol transfer protein alpha isoform OS=Mus musculus OX=10090 GN=Pitpna PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Pitpna PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pitpna PE=2 SV=1 0 3 3 0.2653 0 1 1 1 449.61206 1346.82163 1346.81964 1.47 0.00066 0/0 0 0 12651446 HCD 30 MS2 26.26629 953.7 110 71.2708 21593 21593 21587 QEplus033719.raw F4 951.1 781 985 887.5 1152.8 964.5 421 3.43 1 FALSE 1.14E-05 0.0005769 0.71 -250 105945 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QNLEEQLDR [K].qNLEEQLDR.[L] N-Term(TMT6plex) 3 Q8K3C3 Protein LZIC OS=Mus musculus OX=10090 GN=Lzic PE=1 SV=1 B1AS03; Q8K3C3; B1AS04 Protein LZIC (Fragment) OS=Mus musculus OX=10090 GN=Lzic PE=1 SV=1; Protein LZIC OS=Mus musculus OX=10090 GN=Lzic PE=1 SV=1; Protein LZIC (Fragment) OS=Mus musculus OX=10090 GN=Lzic PE=1 SV=1 0 2 2 0.4658 0 1 1 1 687.36609 1373.7249 1373.72222 1.95 0.00134 0/0 0 0 8717606 HCD 30 MS2 43.24791 702.5 110 71.2755 21595 21595 21587 QEplus033719.raw F4 704.1 634.7 792.1 590.1 763 731 231 2.92 1 FALSE 1.14E-05 5.12E-06 1.103 -250 105955 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGNTLTSQYR [K].mGNTLTSQYR.[F] N-Term(TMT6plex) 4 Q3UFK0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Emb PE=2 SV=1 Q3UFK0; Q3TI59; Q3TSZ8; P21995 Uncharacterized protein OS=Mus musculus OX=10090 GN=Emb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Emb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Emb PE=2 SV=1; Embigin OS=Mus musculus OX=10090 GN=Emb PE=1 SV=2 0 2 2 0.6366 0 1 1 1 700.36322 1399.71916 1399.72011 -0.68 -0.00048 0/0 0 0 4396882 HCD 30 MS2 0 372.9 110 71.2781 21596 21596 21587 QEplus033719.raw F4 343.8 386.2 422 307.4 404.7 373.1 179 3.33 1 FALSE 1.14E-05 1.40E-06 1.21 -250 105961 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEAGGGGGGGISEEEAAQYDR [K].eEAGGGGGGGISEEEAAQYDR.[Q] N-Term(TMT6plex) 2 Q9R1T2 SUMO-activating enzyme subunit 1 OS=Mus musculus OX=10090 GN=Sae1 PE=1 SV=1 Q9R1T2; Q9R1T2-2 SUMO-activating enzyme subunit 1 OS=Mus musculus OX=10090 GN=Sae1 PE=1 SV=1; Isoform 2 of SUMO-activating enzyme subunit 1 OS=Mus musculus OX=10090 GN=Sae1 0 3 3 0.8881 0 1 1 1 756.68127 2268.02927 2268.02138 3.48 0.00263 0/0 0 0 3029177 HCD 30 MS2 12.74944 71.4 110 71.2806 21597 21597 21587 QEplus033719.raw F4 63.5 66.6 68.2 57.4 87.9 85.1 42 8.49 1 FALSE 1.14E-05 6.31E-16 3.676 -250 105968 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAESMLQQADK [K].rAESMLQQADk.[L] N-Term(TMT6plex); K11(TMT6plex) 5 A0A1C7CYV0 Plastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1 Q3UKB1; A0A1C7CYV0; B1AX58; Q3UJG9; Q99K51 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pls3 PE=2 SV=1; Plastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1; Plastin-3 OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pls3 PE=2 SV=1; Plastin-3 OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=3 1 3 3 0.6258 0 1 1 1 578.99078 1734.9578 1734.95727 0.3 0.00017 0/0 0 0 38257816 HCD 30 MS2 10.52682 898.1 55.948 71.2901 21600 21600 21598 QEplus033719.raw F4 978.2 795.8 972.4 696.2 1053.8 892.4 467 5.96 1 FALSE 1.14E-05 9.89E-14 2.568 -250 105974 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADEGISFR [K].aDEGISFR.[G] N-Term(TMT6plex) 4 P35700 Peroxiredoxin-1 OS=Mus musculus OX=10090 GN=Prdx1 PE=1 SV=1 P35700; Q3U9J9; B1AXW6; B1AXW5 Peroxiredoxin-1 OS=Mus musculus OX=10090 GN=Prdx1 PE=1 SV=1; Thioredoxin domain-containing protein OS=Mus musculus OX=10090 GN=Prdx1 PE=2 SV=1; Peroxiredoxin-1 (Fragment) OS=Mus musculus OX=10090 GN=Prdx1 PE=1 SV=1; Peroxiredoxin-1 (Fragment) OS=Mus musculus OX=10090 GN=Prdx1 PE=1 SV=8 0 2 2 0.6148 0 1 1 1 562.3017 1123.59612 1123.5945 1.44 0.00081 0/0 0 0 366805344 HCD 30 MS2 41.03665 734.9 2.695 71.2924 21601 21601 21598 QEplus033719.raw F4 737.3 696.2 824 584.6 818.7 748.7 203 2.7 1 FALSE 0.001038 0.01361 0.351 -250 105980 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLVIQDK [K].rLVIQDk.[N] N-Term(TMT6plex); K7(TMT6plex) 3 P47962 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3 P47962; Q3TKR5; Q3U850 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3; Ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; Ribosomal_L18_c domain-containing protein OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1 1 3 3 0.3706 0 1 1 1 443.95911 1329.86277 1329.86184 0.7 0.00031 0/0 0 0 194739744 HCD 30 MS2 29.78645 587.5 5.698 71.2946 21602 21602 21598 QEplus033719.raw F4 647.4 432.9 634 491.2 602.1 717.3 313 3.67 1 FALSE 5.44E-05 0.001851 0.606 -250 105989 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDEAAFQK [R].tDEAAFQk.[V] N-Term(TMT6plex); K8(TMT6plex) 2 A0A0G2JGD2 Protein S100-A4 (Fragment) OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1 A0A0G2JGD2; P07091 Protein S100-A4 (Fragment) OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1; Protein S100-A4 OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1 0 2 2 0.5144 0 1 1 1 684.38367 1367.76006 1367.7571 2.16 0.00148 0/0 0 0 18777514 HCD 30 MS2 33.62409 1126.9 70.794 71.2969 21603 21603 21598 QEplus033719.raw F4 1185.9 1652.9 1209.5 936.7 1024.3 752.1 328 2.78 1 FALSE 1.14E-05 0.0004282 0.735 -250 105996 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENLVDK [K].eNLVDk.[I] N-Term(TMT6plex); K6(TMT6plex) 5 Q3UE92 Xaa-Pro aminopeptidase 1 OS=Mus musculus OX=10090 GN=Xpnpep1 PE=1 SV=1 Q3UE92; A0A494BBG8; S4R1I3; Q3TL27; Q3UKF5 Xaa-Pro aminopeptidase 1 OS=Mus musculus OX=10090 GN=Xpnpep1 PE=1 SV=1; Xaa-Pro aminopeptidase 1 OS=Mus musculus OX=10090 GN=Xpnpep1 PE=1 SV=1; Xaa-Pro aminopeptidase 1 OS=Mus musculus OX=10090 GN=Xpnpep1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Xpnpep1 PE=2 SV=1; X-prolyl aminopeptidase OS=Mus musculus OX=10090 GN=Xpnpep1 PE=2 SV=1 0 2 2 0.2379 0 1 1 1 588.35559 1175.70391 1175.70361 0.25 0.00015 0/0 0 0 17151488 HCD 30 MS2 34.11712 1619.9 110 71.2994 21604 21604 21598 QEplus033719.raw F4 1965 1197.7 1540.1 1563.2 1757.7 1695.9 516 2.06 1 FALSE 0.005764 0.0966 0.016 -250 106004 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAVGEQLGK [R].gAVGEQLGk.[M] N-Term(TMT6plex); K9(TMT6plex) 1 Q1XH17 Tripartite motif-containing protein 72 OS=Mus musculus OX=10090 GN=Trim72 PE=1 SV=1 Q1XH17 Tripartite motif-containing protein 72 OS=Mus musculus OX=10090 GN=Trim72 PE=1 SV=1 0 2 2 0.5909 0 1 1 1 658.90125 1316.79521 1316.79382 1.06 0.0007 0/0 0 0 16510064 HCD 30 MS2 0 1228.9 110 71.3019 21605 21605 21598 QEplus033719.raw F4 1751.9 269.7 952.2 2180.5 332.3 1886.7 545 3.74 1 FALSE 1.14E-05 1.39E-06 1.21 -250 106067 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGQVIGIGAGQQSR [K].dGQVIGIGAGQQSR.[I] N-Term(TMT6plex) 1 Q9CWJ9 Bifunctional purine biosynthesis protein ATIC OS=Mus musculus OX=10090 GN=Atic PE=1 SV=2 Q9CWJ9 Bifunctional purine biosynthesis protein ATIC OS=Mus musculus OX=10090 GN=Atic PE=1 SV=2 0 2 2 0.7216 0 1 1 1 807.94348 1614.87969 1614.8761 2.22 0.00179 0/0 0 0 2710524 HCD 30 MS2 28.24234 154.4 110 71.3266 21614 21614 21609 QEplus033719.raw F4 157 116.5 171.7 137.6 176.3 167.3 369 3.88 1 FALSE 1.14E-05 2.41E-10 1.925 -250 106085 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDEAAFQK [R].tDEAAFQk.[V] N-Term(TMT6plex); K8(TMT6plex) 2 A0A0G2JGD2 Protein S100-A4 (Fragment) OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1 A0A0G2JGD2; P07091 Protein S100-A4 (Fragment) OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1; Protein S100-A4 OS=Mus musculus OX=10090 GN=S100a4 PE=1 SV=1 0 3 3 0.3964 0 1 1 1 456.59015 1367.75589 1367.7571 -0.88 -0.0004 0/0 0 0 11335665 HCD 30 MS2 74.01442 701.4 70.219 71.3338 21617 21617 21609 QEplus033719.raw F4 552.7 872.4 589.3 397.4 1151.1 645.7 308 2.75 1 FALSE 0.001421 0.02015 0.28 -250 106094 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERLYPLRK [K].eRLYPLRk.[Y] N-Term(TMT6plex); K8(TMT6plex) 1 Q6ZWV7 60S ribosomal protein L35 OS=Mus musculus OX=10090 GN=Rpl35 PE=1 SV=1 Q6ZWV7 60S ribosomal protein L35 OS=Mus musculus OX=10090 GN=Rpl35 PE=1 SV=1 2 4 4 0.4698 0 1 1 1 383.99741 1532.96779 1532.9677 0.06 0.00002 0/0 0 0 11127662 HCD 30 MS2 26.5211 565.5 110 71.3363 21618 21618 21609 QEplus033719.raw F4 554.2 494 715.9 459 521.3 648.7 340 2.32 1 FALSE 0.002586 0.05121 0.139 -250 106102 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTVTQSASGDPEVDKK [R].nTVTQSASGDPEVDkk.[I] N-Term(TMT6plex); K15(TMT6plex); K16(TMT6plex) 2 Q8BJW6 Eukaryotic translation initiation factor 2A OS=Mus musculus OX=10090 GN=Eif2a PE=1 SV=2 Q8BJW6-2; Q8BJW6 Isoform 2 of Eukaryotic translation initiation factor 2A OS=Mus musculus OX=10090 GN=Eif2a; Eukaryotic translation initiation factor 2A OS=Mus musculus OX=10090 GN=Eif2a PE=1 SV=2 1 3 3 0.7331 0 1 1 1 788.44006 2363.30564 2363.30213 1.48 0.00117 0/0 0 0 9084818 HCD 30 MS2 0 339 110 71.3388 21619 21619 21609 QEplus033719.raw F4 343.8 279.8 383.8 269 368.7 389.2 462 4.87 1 FALSE 1.14E-05 6.31E-16 3.071 -250 106109 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DWHRPCLK [K].dWHRPcLk.[C] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 4 P63254 Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=2 P63254; Q6P3B4; A0A0G2JEK2; Q8C2N7 Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=2; Cysteine-rich protein 1 (Intestinal) OS=Mus musculus OX=10090 GN=Crip1 PE=2 SV=1; Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Crip1 PE=2 SV=1 0 4 4 0.5775 0 1 1 1 393.22382 1569.87343 1569.87242 0.64 0.00025 0/0 0 0 63387324 HCD 30 MS2 9.999601 475.3 20.417 71.3461 21621 21621 21620 QEplus033719.raw F4 486.4 417.1 608.6 408.9 393.9 537 356 3.74 1 FALSE 1.14E-05 0.000248 0.781 -250 106132 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVEQLEK [K].qVEQLEk.[E] N-Term(TMT6plex); K7(TMT6plex) 6 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3TRH1; Q6A0B9; Q3TKF9; Q3UL99; Q3UM46 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; MKIAA0139 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 0 2 2 0.3151 0 1 1 1 666.40112 1331.79497 1331.79349 1.11 0.00074 0/0 0 0 15439176 HCD 30 MS2 60.20406 1308.9 87.285 71.3529 21624 21624 21620 QEplus033719.raw F4 1387.1 1112.2 1426.6 1035.4 1466.8 1425.6 549 3.11 1 FALSE 5.44E-05 0.001874 0.605 -250 106140 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAESMLQQADK [K].rAESMLQQADk.[L] N-Term(TMT6plex); K11(TMT6plex) 5 A0A1C7CYV0 Plastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1 Q3UKB1; A0A1C7CYV0; B1AX58; Q3UJG9; Q99K51 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pls3 PE=2 SV=1; Plastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1; Plastin-3 OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pls3 PE=2 SV=1; Plastin-3 OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=3 1 2 2 0.6967 0 1 1 1 867.98346 1734.95964 1734.95727 1.36 0.00118 0/0 0 0 5724995.5 HCD 30 MS2 0 238.7 110 71.3554 21625 21625 21620 QEplus033719.raw F4 244.6 238.6 287 164 253.9 244.2 463 3.66 1 FALSE 1.14E-05 3.35E-08 1.517 -250 106147 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSAPPGPVPEGQIR [K].gSAPPGPVPEGQIR.[V] N-Term(TMT6plex) 3 O09131 Glutathione S-transferase omega-1 OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=2 O09131; A0A494BAB1; A0A494B9X6 Glutathione S-transferase omega-1 OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=2; Glutathione-dependent dehydroascorbate reductase OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=1; Glutathione S-transferase omega-1 (Fragment) OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=1 0 3 3 0.6967 0 1 1 1 530.96521 1590.88108 1590.88012 0.6 0.00032 0/0 0 0 17057032 HCD 30 MS2 25.83329 754.6 110 71.3579 21626 21626 21620 QEplus033719.raw F4 969.3 508.5 689.9 636.6 969.8 753.8 448 4.88 1 FALSE 1.14E-05 5.76E-08 1.473 -250 106164 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVDQTIEK [K].aVDQTIEk.[N] N-Term(TMT6plex); K8(TMT6plex) 1 O35114 Lysosome membrane protein 2 OS=Mus musculus OX=10090 GN=Scarb2 PE=1 SV=3 O35114 Lysosome membrane protein 2 OS=Mus musculus OX=10090 GN=Scarb2 PE=1 SV=3 0 2 2 0.5513 0 1 1 1 681.40649 1361.80571 1361.80405 1.22 0.00083 0/0 0 0 14371633 HCD 30 MS2 47.18448 1152.2 110 71.3628 21628 21628 21620 QEplus033719.raw F4 1153 986 1360.2 1000.9 1228.7 1184.2 504 3.41 1 FALSE 1.14E-05 2.31E-05 0.978 -250 106171 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLMEECK [R].kLMEEck.[R] N-Term(TMT6plex); K1(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex) 2 Q9WV55 Vesicle-associated membrane protein-associated protein A OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=2 Q9WV55; A0A3B2W837 Vesicle-associated membrane protein-associated protein A OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=2; Vesicle-associated membrane protein-associated protein A (Fragment) OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=1 1 3 3 0.4777 0 1 1 1 542.31793 1624.93924 1624.93695 1.41 0.00077 0/0 0 0 13080371 HCD 30 MS2 40.45102 1102.3 110 71.3653 21629 21629 21620 QEplus033719.raw F4 1098.4 1090 1181.3 1086.3 1060.4 1097.3 402 2.24 1 FALSE 0.001335 0.0185 0.295 -250 106186 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQTSSIPQKPQTNK [R].sQTSSIPQkPQTNk.[S] N-Term(TMT6plex); K9(TMT6plex); K14(TMT6plex) 6 Q80X50 Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1 Q80X50-5; Q8BKR4; Q8BZ69; Q80X50; Q3TSB0; A0A0G2JEC6 Isoform 5 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1; Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1; Ubiquitin-associated protein 2-like (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1 0 3 3 0.6639 0 1 1 1 744.43738 2231.29758 2231.29626 0.59 0.00044 0/0 0 0 3411188.5 HCD 30 MS2 0 310.6 110 71.3751 21632 21632 21631 QEplus033719.raw F4 332.6 225 349 250.6 354.7 351.7 374 3.66 1 FALSE 1.14E-05 1.13E-09 1.797 -250 106202 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAAGLPGPK [R].gAAGLPGPk.[G] N-Term(TMT6plex); K9(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 2 2 0.625 0 1 1 1 613.3877 1225.76811 1225.76688 1.01 0.00062 0/0 0 0 39906424 HCD 30 MS2 26.58317 1286.8 54.591 71.3799 21634 21634 21631 QEplus033719.raw F4 1270.4 1161.4 1486.5 600.1 2025.4 1176.8 191 3.12 1 FALSE 1.14E-05 1.29E-05 1.026 -250 106223 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAVGEQLGK [R].gAVGEQLGk.[M] N-Term(TMT6plex); K9(TMT6plex) 1 Q1XH17 Tripartite motif-containing protein 72 OS=Mus musculus OX=10090 GN=Trim72 PE=1 SV=1 Q1XH17 Tripartite motif-containing protein 72 OS=Mus musculus OX=10090 GN=Trim72 PE=1 SV=1 0 3 3 0.4192 0 1 1 1 439.60306 1316.79462 1316.79382 0.61 0.00027 0/0 0 0 9152716 HCD 30 MS2 47.92376 877.2 96.334 71.3869 21637 21637 21631 QEplus033719.raw F4 1010.5 532.8 797.1 1060.2 789.9 1073 545 2.91 1 FALSE 0.002157 0.04099 0.171 -250 106227 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQNSPIYISR [K].eQNSPIYISR.[IV] N-Term(TMT6plex) 7 O88952 Protein lin-7 homolog C OS=Mus musculus OX=10090 GN=Lin7c PE=1 SV=2 Q3TUM0; O88951; Q3TS99; O88952; Q3UX93; Q8JZS0; Q3TTY6 Protein lin-7 homolog A OS=Mus musculus OX=10090 GN=Lin7a PE=1 SV=1; Protein lin-7 homolog B OS=Mus musculus OX=10090 GN=Lin7b PE=1 SV=2; PDZ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Lin7c PE=2 SV=1; Protein lin-7 homolog C OS=Mus musculus OX=10090 GN=Lin7c PE=1 SV=2; Protein lin-7 homolog OS=Mus musculus OX=10090 GN=Lin7c PE=2 SV=1; Protein lin-7 homolog A OS=Mus musculus OX=10090 GN=Lin7a PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lin7c PE=2 SV=1 0 2 2 0.4901 0 1 1 1 718.39099 1435.77471 1435.77426 0.31 0.00022 0/0 0 0 6542804 HCD 30 MS2 0 385.9 110 71.3895 21638 21638 21631 QEplus033719.raw F4 375.3 337.9 432.7 327.1 412.2 430.3 379 3.04 1 FALSE 1.14E-05 2.60E-06 1.158 -250 106263 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAYRPPK [K].lAYRPPk.[-] N-Term(TMT6plex); K7(TMT6plex) 2 Q9D0M3 "Cytochrome c1, heme protein, mitochondrial OS=Mus musculus OX=10090 GN=Cyc1 PE=1 SV=1" Q9D0M3; Q9D0M3-2 "Cytochrome c1, heme protein, mitochondrial OS=Mus musculus OX=10090 GN=Cyc1 PE=1 SV=1; Isoform 2 of Cytochrome c1, heme protein, mitochondrial OS=Mus musculus OX=10090 GN=Cyc1" 0 3 3 0.4528 0 1 1 1 434.94867 1302.83146 1302.82981 1.26 0.00055 0/0 0 0 19453204 HCD 30 MS2 40.58146 867.5 60.505 71.4058 21644 21644 21642 QEplus033719.raw F4 795.6 656.9 956.8 973.3 736.5 1085.8 281 2.12 1 FALSE 0.002056 0.03748 0.184 -250 106285 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEQISK [K].mEQISk.[G] N-Term(TMT6plex); K6(TMT6plex) 2 Q9CZW4 Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=2 E9PUC2; Q9CZW4 Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=1; Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=2 0 2 2 0.2892 0 1 1 1 597.35175 1193.69621 1193.69642 -0.17 -0.0001 0/0 0 0 22551432 HCD 30 MS2 19.72068 1168.8 73.639 71.4153 21648 21648 21642 QEplus033719.raw F4 1299.4 803.6 1072.6 1287.3 1055.5 1494.5 396 2.49 1 FALSE 0.007237 0.1151 -0.032 -250 106294 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAEVGAGGNK [K].iAEVGAGGNk.[S] N-Term(TMT6plex); K10(TMT6plex) 2 P42669 Transcriptional activator protein Pur-alpha OS=Mus musculus OX=10090 GN=Pura PE=1 SV=1 P42669; Q8C6E9 Transcriptional activator protein Pur-alpha OS=Mus musculus OX=10090 GN=Pura PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pura PE=2 SV=1 0 2 2 0.5263 0 1 1 1 687.41223 1373.81719 1373.81529 1.38 0.00095 0/0 0 0 17156632 HCD 30 MS2 45.59477 1021.5 110 71.4178 21649 21649 21642 QEplus033719.raw F4 1009.8 912.5 1163.7 911.7 1038.9 1092.2 488 3.61 1 FALSE 1.14E-05 5.18E-08 1.482 -250 106313 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIQEMQQK [K].tIQEMQQk.[L] N-Term(TMT6plex); K8(TMT6plex) 5 Q3ULT2 Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1 A0A1L1SV25; Q3UDJ7; Q3ULT2; Q1A602; E9Q2W9 Alpha-actinin-4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Alpha-actinin-4 (Fragment) OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1 0 2 2 0.4255 0 1 1 1 732.41907 1463.83086 1463.82922 1.12 0.00082 0/0 0 0 11793407 HCD 30 MS2 15.52399 753.6 110 71.4227 21651 21651 21642 QEplus033719.raw F4 771.5 779.3 875.6 510.7 891.3 693.3 473 3.76 1 FALSE 1.14E-05 4.93E-05 0.916 -250 106340 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VANSGITRVEK [K].vANSGITRVEk.[A] N-Term(TMT6plex); K11(TMT6plex) 4 P80315 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3 P80315; Q3TII0; Q3UJZ8; G5E839 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1 1 3 3 0.2464 0 1 1 1 544.66711 1631.98679 1631.98448 1.42 0.00077 0/0 0 0 11220697 HCD 30 MS2 28.72927 1046.6 110 71.435 21655 21655 21653 QEplus033719.raw F4 959.3 926.4 1093.4 926.8 1242.5 1131.3 361 2.11 1 FALSE 0.002636 0.05252 0.135 -250 106349 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IYHPNVDK [K].iYHPNVDk.[L] N-Term(TMT6plex); K8(TMT6plex) 1 P61089 Ubiquitin-conjugating enzyme E2 N OS=Mus musculus OX=10090 GN=Ube2n PE=1 SV=1 P61089 Ubiquitin-conjugating enzyme E2 N OS=Mus musculus OX=10090 GN=Ube2n PE=1 SV=1 0 3 3 0.4858 0 1 1 1 481.95059 1443.83722 1443.83602 0.83 0.0004 0/0 0 0 54955712 HCD 30 MS2 17.52413 746.8 32.367 71.4372 21656 21656 21653 QEplus033719.raw F4 718.4 614.1 748.7 739.6 830.8 829.4 352 3.52 1 FALSE 0.0003211 0.006284 0.473 -250 106369 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CAYVYK [R].cAYVYk.[A] N-Term(TMT6plex); C1(Carbamidomethyl); K6(TMT6plex) 3 O55142 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2 O55142; Q9DC85; Q8BQV7 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=1 SV=2; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1; 60S ribosomal protein L35a OS=Mus musculus OX=10090 GN=Rpl35a PE=2 SV=1 0 2 2 0.5779 0 1 1 1 631.35486 1261.70244 1261.7015 0.74 0.00047 0/0 0 0 15912265 HCD 30 MS2 25.01917 1301.7 110 71.4443 21659 21659 21653 QEplus033719.raw F4 1443.8 1213.9 1424.4 1143.2 1381.2 1203.5 335 2.44 1 FALSE 0.002611 0.05174 0.137 -250 106377 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNEEGYFVTR [K].gNEEGYFVTR.[R] N-Term(TMT6plex) 3 P37889 Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 P37889-2; Q99K58; P37889 Isoform 2 of Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2; Fibulin 2 OS=Mus musculus OX=10090 GN=Fbln2 PE=2 SV=1; Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 0 2 2 0.6697 0 1 1 1 700.86005 1400.71282 1400.70076 8.61 0.00603 0/0 0 0 8600677 HCD 30 MS2 36.26762 684 110 71.4468 21660 21660 21653 QEplus033719.raw F4 630.9 695.6 776.5 670.9 690.8 639.2 167 3.27 1 FALSE 1.14E-05 3.93E-07 1.314 -250 106384 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTTAWTVGR [R].dTTAWTVGR.[I] N-Term(TMT6plex) 4 Q3TFE8 Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1 Q3TFE8; Q7TSZ6; Q3UHW8; P70168 Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1; Karyopherin (Importin) beta 1 OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1; Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1; Importin subunit beta-1 OS=Mus musculus OX=10090 GN=Kpnb1 PE=1 SV=2 0 2 2 0.5517 0 1 1 1 618.33337 1235.65947 1235.65817 1.06 0.00065 0/0 0 0 53793180 HCD 30 MS2 26.27171 1109.2 30.569 71.4491 21661 21661 21653 QEplus033719.raw F4 1039.9 954.8 1237 940.6 1292.9 1190 305 3.19 1 FALSE 0.0003408 0.00642 0.47 -250 106401 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSDSLIK [R].gSDSLIk.[G] N-Term(TMT6plex); K7(TMT6plex) 2 O35129 Prohibitin-2 OS=Mus musculus OX=10090 GN=Phb2 PE=1 SV=1 F6QPR1; O35129 Prohibitin (Fragment) OS=Mus musculus OX=10090 GN=Phb2 PE=1 SV=1; Prohibitin-2 OS=Mus musculus OX=10090 GN=Phb2 PE=1 SV=1 0 2 2 0.1159 0 1 1 1 589.36322 1177.71916 1177.71926 -0.08 -0.00005 0/0 0 0 35901692 HCD 30 MS2 19.90331 1567.3 57.833 71.4536 21663 21663 21653 QEplus033719.raw F4 1619.2 1296.9 1710.7 1518.3 1512.2 1746.4 314 2.07 1 FALSE 0.001343 0.01899 0.29 -250 106410 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLIPAANTGESK [K].hLIPAANTGESk.[V] N-Term(TMT6plex); K12(TMT6plex) 3 P62259 14-3-3 protein epsilon OS=Mus musculus OX=10090 GN=Ywhae PE=1 SV=1 F6WA09; P62259; Q8BPH1 14-3-3 protein epsilon (Fragment) OS=Mus musculus OX=10090 GN=Ywhae PE=1 SV=1; 14-3-3 protein epsilon OS=Mus musculus OX=10090 GN=Ywhae PE=1 SV=1; 14_3_3 domain-containing protein OS=Mus musculus OX=10090 GN=Ywhae PE=2 SV=1 0 3 3 0.7653 0 1 1 1 565.99817 1695.97995 1695.97939 0.33 0.00019 0/0 0 0 69408672 HCD 30 MS2 17.65689 581 23.894 71.4609 21665 21665 21664 QEplus033719.raw F4 626.5 504.2 603 473.4 719.4 559.7 408 4.26 1 FALSE 1.14E-05 4.23E-09 1.688 -250 106418 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MADLHAVPR [K].mADLHAVPR.[G] N-Term(TMT6plex) 4 E9PWE8 Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 Q3TAS8; E9PWE8; Q62188; Q3TT92 Amidohydro-rel domain-containing protein OS=Mus musculus OX=10090 GN=Dpysl3 PE=2 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 0 3 3 0.5404 0 1 1 1 413.5675 1238.68796 1238.68769 0.22 0.00009 0/0 0 0 9676015 HCD 30 MS2 32.85019 515.6 99.727 71.4632 21666 21666 21664 QEplus033719.raw F4 522.1 345.8 550.5 496.9 502.8 675.7 313 3.22 1 FALSE 1.14E-05 4.31E-06 1.117 -250 106426 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQVANSAFVER [K].eQVANSAFVER.[V] N-Term(TMT6plex) 4 Q71LX8 Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q811H6; Q80YC2; Q71LX8; E9Q0C3 Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; Heat shock protein HSP 90-beta (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 0 3 3 0.7073 0 1 1 1 493.59872 1478.78162 1478.78007 1.05 0.00052 0/0 0 0 127264720 HCD 30 MS2 19.87214 461.5 10.889 71.4655 21667 21667 21664 QEplus033719.raw F4 409.4 412 538.5 386.7 516 506.4 303 4.68 1 FALSE 1.14E-05 6.16E-08 1.467 -250 106429 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTYSTEPNNLK [K].qTYSTEPNNLk.[A] N-Term(TMT6plex); K11(TMT6plex) 2 Q5M9N5 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1 Q5M9N5; Q5M9J8 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1; 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1 0 3 3 0.5664 0 1 1 1 584.98975 1752.95469 1752.95323 0.83 0.00048 0/0 0 0 70777768 HCD 30 MS2 18.76925 635.3 16.694 71.4677 21668 21668 21664 QEplus033719.raw F4 594.3 540.2 736.2 564.7 698.4 677.7 424 3.99 1 FALSE 1.14E-05 9.99E-05 0.857 -250 106442 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FSGGFGAR [R].fSGGFGAR.[D] N-Term(TMT6plex) 7 B9EKE9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1 B9EKE9; B7ZWF1; Q62095; Q3TQX5; P16381; Q3U484; Q3TUR4 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; ATP-dependent RNA helicase DDX3Y OS=Mus musculus OX=10090 GN=Ddx3y PE=1 SV=2; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=1; Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus OX=10090 GN=D1Pas1 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3y PE=2 SV=1; Helicase C-terminal domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ddx3y PE=2 SV=1 0 2 2 0.46 0 1 1 1 514.28082 1027.55437 1027.55225 2.07 0.00106 0/0 0 0 33285708 HCD 30 MS2 34.90909 863.8 38.968 71.4722 21670 21670 21664 QEplus033719.raw F4 974.4 723.6 890.8 691.2 1044.1 859 88 2.5 1 FALSE 0.0007246 0.01041 0.398 -250 106456 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNEEGYFVTR [K].gNEEGYFVTR.[R] N-Term(TMT6plex) 3 P37889 Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 P37889-2; Q99K58; P37889 Isoform 2 of Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2; Fibulin 2 OS=Mus musculus OX=10090 GN=Fbln2 PE=2 SV=1; Fibulin-2 OS=Mus musculus OX=10090 GN=Fbln2 PE=1 SV=2 0 2 2 0.7226 0 1 1 1 700.85419 1400.7011 1400.70076 0.24 0.00017 0/0 0 0 11963452 HCD 30 MS2 39.56415 814.4 110 71.477 21672 21672 21664 QEplus033719.raw F4 787.6 801.6 901.4 842.8 767.8 785.4 123 3.28 1 FALSE 1.14E-05 8.86E-07 1.247 -250 106470 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAEVGAGGNK [K].iAEVGAGGNk.[S] N-Term(TMT6plex); K10(TMT6plex) 2 P42669 Transcriptional activator protein Pur-alpha OS=Mus musculus OX=10090 GN=Pura PE=1 SV=1 P42669; Q8C6E9 Transcriptional activator protein Pur-alpha OS=Mus musculus OX=10090 GN=Pura PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pura PE=2 SV=1 0 3 3 0.4696 0 1 1 1 458.61005 1373.81559 1373.81529 0.22 0.0001 0/0 0 0 11419286 HCD 30 MS2 54.91087 1082.5 77.298 71.4817 21674 21674 21664 QEplus033719.raw F4 1112.6 796.8 1194.6 774.1 1282.5 1334.7 470 3.45 1 FALSE 1.14E-05 1.56E-06 1.201 -250 106477 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IIAPPER [RK].iIAPPER.[DK] N-Term(TMT6plex) 34 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q6GQT3; Q8BFZ3; Q3TG92; P63268; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61275; Q3UAF6; Q3U122; E9Q1F2; Q3UAA9; B2RRX1; Q61272; Q3U5R4; Q3UAF7; Q99NC5; Q3TIJ9; P62737; P68134; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; E9Q3M9; P68033; P63260; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804 "2010300C02Rik protein OS=Mus musculus OX=10090 GN=Cracdl PE=2 SV=1; Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Capping protein-inhibiting regulator of actin-like OS=Mus musculus OX=10090 GN=Cracdl PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 0 2 2 0.5171 0 1 1 1 512.82257 1024.63786 1024.63525 2.56 0.00131 0/0 0 0 37439748 HCD 30 MS2 11.43551 821.5 47.371 71.489 21676 21676 21675 QEplus033719.raw F4 816.6 623.3 914.8 751.3 868.2 954.9 36 2.05 4 FALSE 0.008654 0.153 -0.09 -250 106487 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AYGELPEHAK [K].aYGELPEHAk.[I] N-Term(TMT6plex); K10(TMT6plex) 17 J3QNT6; Q8BMJ3 "Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad15 PE=3 SV=1;Eukaryotic translation initiation factor 1A, X-chromosomal OS=Mus musculus OX=10090 GN=Eif1ax PE=2 SV=3" A0A494BB95; J3QP87; J3QNT6; A0A1Y7VJE9; A0A1Y7VK80; Q8BMJ3; J3QQ02; Q3UC76; Q4FJR7; J3QPI8; A0A1Y7VNG9; A0A1Y7VLT7; Q3TQZ4; Q3UTA4; Q8BX20; J3QMW5; Q3UT53 "Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1a PE=1 SV=1; Eukaryotic translation initiation factor 1A domain-containing 14 OS=Mus musculus OX=10090 GN=Eif1ad14 PE=3 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad15 PE=3 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad13 PE=3 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad12 PE=3 SV=1; Eukaryotic translation initiation factor 1A, X-chromosomal OS=Mus musculus OX=10090 GN=Eif1ax PE=2 SV=3; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad11 PE=1 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1a PE=2 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1a PE=2 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad16 PE=3 SV=1; Eukaryotic translation initiation factor 1A domain-containing 18 OS=Mus musculus OX=10090 GN=Eif1ad18 PE=3 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad4 PE=3 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad3 PE=2 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad10 PE=2 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad7 PE=2 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad17 PE=3 SV=1; Eukaryotic translation initiation factor 4C OS=Mus musculus OX=10090 GN=Eif1ad2 PE=2 SV=1" 0 3 3 0.6898 0 1 1 1 524.96484 1572.87998 1572.87861 0.87 0.00045 0/0 0 0 32582586 HCD 30 MS2 37.47182 1006.6 43.17 71.4913 21677 21677 21675 QEplus033719.raw F4 1016.9 689 1061.7 1189 849.5 1233.6 395 3.32 2 FALSE 1.14E-05 4.94E-07 1.296 -250 106501 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADVDAATLAR [R].aDVDAATLAR.[I] N-Term(TMT6plex) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 2 2 0.6319 0 1 1 1 616.3468 1231.68633 1231.68438 1.58 0.00097 0/0 0 0 68716160 HCD 30 MS2 6.95682 774.8 27.788 71.4958 21679 21679 21675 QEplus033719.raw F4 937.8 305.2 751 1137.6 393.1 1124.3 392 3.64 1 FALSE 1.14E-05 5.86E-08 1.471 -250 106510 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDLTEIR [K].eDLTEIR.[D] N-Term(TMT6plex) 5 Q5M8R8 60S acidic ribosomal protein P0 OS=Mus musculus OX=10090 GN=Rplp0 PE=2 SV=1 Q5FWB6; O89073; Q5M8R8; D3YVM5; S4R1N1 60S acidic ribosomal protein P0 OS=Mus musculus OX=10090 GN=Rplp0 PE=2 SV=1; 60S acidic ribosomal protein P0 (Fragment) OS=Mus musculus OX=10090 GN=Rplp0 PE=2 SV=1; 60S acidic ribosomal protein P0 OS=Mus musculus OX=10090 GN=Rplp0 PE=2 SV=1; 60S acidic ribosomal protein P0 (Fragment) OS=Mus musculus OX=10090 GN=Rplp0 PE=1 SV=1; 60S acidic ribosomal protein P0 (Fragment) OS=Mus musculus OX=10090 GN=Rplp0 PE=1 SV=1 0 2 2 0.2463 0 1 1 1 552.80981 1104.61235 1104.60982 2.29 0.00127 0/0 0 0 61775436 HCD 30 MS2 37.33688 798.2 16.76 71.4981 21680 21680 21675 QEplus033719.raw F4 823.3 704.5 823.8 614.4 986.5 836.5 268 2.72 1 FALSE 0.000262 0.005361 0.493 -250 106515 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTGKPIEASIR [K].tTGkPIEASIR.[GE] N-Term(TMT6plex); K4(TMT6plex) 8 P14824; Q99JX6 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3;Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 Q3V2Z4; P14824; F8WIT2; Q3UI56; Q3TUI1; Q8CEX0; Q99JX6; Q3UDK4 Annexin OS=Mus musculus OX=10090 PE=2 SV=1; Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 0 3 3 0.4532 0 1 1 1 544.33533 1630.99143 1630.98923 1.35 0.00073 0/0 0 0 15043365 HCD 30 MS2 50.62615 1383.4 82.172 71.5003 21681 21681 21675 QEplus033719.raw F4 1422.2 1266.5 1395.7 1119.6 1732.1 1364.6 324 2.67 2 FALSE 5.44E-05 0.002097 0.594 -250 106523 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSAPPGPVPEGQIR [K].gSAPPGPVPEGQIR.[V] N-Term(TMT6plex) 3 O09131 Glutathione S-transferase omega-1 OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=2 O09131; A0A494BAB1; A0A494B9X6 Glutathione S-transferase omega-1 OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=2; Glutathione-dependent dehydroascorbate reductase OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=1; Glutathione S-transferase omega-1 (Fragment) OS=Mus musculus OX=10090 GN=Gsto1 PE=1 SV=1 0 2 2 0.7291 0 1 1 1 795.94476 1590.88225 1590.88012 1.34 0.00106 0/0 0 0 11368867 HCD 30 MS2 0 249.7 110 71.5029 21682 21682 21675 QEplus033719.raw F4 230.2 241.9 296.3 215.2 233.7 280.7 441 4.54 1 FALSE 1.14E-05 2.68E-10 1.916 -250 106530 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RIEIQPK [R].rIEIQPk.[H] N-Term(TMT6plex); K7(TMT6plex) 1 O55029 Coatomer subunit beta' OS=Mus musculus OX=10090 GN=Copb2 PE=1 SV=2 O55029 Coatomer subunit beta' OS=Mus musculus OX=10090 GN=Copb2 PE=1 SV=2 1 3 3 0.5151 0 1 1 1 447.96017 1341.86597 1341.86184 3.08 0.00138 0/0 0 0 11139484 HCD 30 MS2 31.8703 1065.2 109.107 71.5054 21683 21683 21675 QEplus033719.raw F4 1151.3 892.3 1087.2 766.4 1313.3 1180.8 106 2.99 1 FALSE 0.0003312 0.006374 0.471 -250 106536 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLTGSPGSPGPDGK [K].gLTGSPGSPGPDGk.[T] N-Term(TMT6plex); K14(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 2 2 0.6371 0 1 1 1 842.96814 1684.929 1684.92702 1.18 0.00099 0/0 0 0 7880629.5 HCD 30 MS2 0 507.4 110 71.5079 21684 21684 21675 QEplus033719.raw F4 477.9 564.9 664.3 179.5 651.3 506.7 384 3.83 1 FALSE 1.14E-05 1.29E-14 2.736 -250 106542 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITQSAPVK [R].iTQSAPVk.[Q] N-Term(TMT6plex); K8(TMT6plex) 6 P46938 Transcriptional coactivator YAP1 OS=Mus musculus OX=10090 GN=Yap1 PE=1 SV=2 G3UYV4; P46938-2; G3UYW7; G3UYA6; P46938; G3UY62 Transcriptional coactivator YAP1 OS=Mus musculus OX=10090 GN=Yap1 PE=1 SV=1; Isoform 2 of Transcriptional coactivator YAP1 OS=Mus musculus OX=10090 GN=Yap1; Transcriptional coactivator YAP1 (Fragment) OS=Mus musculus OX=10090 GN=Yap1 PE=1 SV=1; Transcriptional coactivator YAP1 OS=Mus musculus OX=10090 GN=Yap1 PE=1 SV=1; Transcriptional coactivator YAP1 OS=Mus musculus OX=10090 GN=Yap1 PE=1 SV=2; Transcriptional coactivator YAP1 OS=Mus musculus OX=10090 GN=Yap1 PE=1 SV=1 0 2 2 0.2712 0 1 1 1 651.4137 1301.82012 1301.81931 0.62 0.0004 0/0 0 0 7066556.5 HCD 30 MS2 46.70675 853.7 110 71.5104 21685 21685 21675 QEplus033719.raw F4 853.5 640.5 906.9 792.7 902.4 1026 393 2.36 1 FALSE 0.0005174 0.008154 0.436 -250 106552 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTAAMGK [K].vTAAMGk.[K] N-Term(TMT6plex); K7(TMT6plex) 2 P61358 60S ribosomal protein L27 OS=Mus musculus OX=10090 GN=Rpl27 PE=1 SV=2 P61358; Q9CSM4 60S ribosomal protein L27 OS=Mus musculus OX=10090 GN=Rpl27 PE=1 SV=2; 60S ribosomal protein L27 (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.4305 0 1 1 1 568.34955 1135.69182 1135.69094 0.78 0.00044 0/0 0 0 82104848 HCD 30 MS2 17.82655 934.8 17.032 71.5177 21687 21687 21686 QEplus033719.raw F4 916.2 617.8 946.7 843.6 1159.3 1125 207 2.95 1 FALSE 0.0002814 0.005618 0.487 -250 106559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVGVEPAADGK [K].tVGVEPAADGk.[G] N-Term(TMT6plex); K11(TMT6plex) 2 Q5M9N5 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1 Q5M9N5; Q5M9J8 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1; 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1 0 2 2 0.6967 0 1 1 1 751.43597 1501.86467 1501.86263 1.36 0.00102 0/0 0 0 24614796 HCD 30 MS2 10.13253 803.2 110 71.5202 21688 21688 21686 QEplus033719.raw F4 711 659.9 916.4 679.5 920.7 931.6 434 3.99 1 FALSE 1.14E-05 3.13E-10 1.903 -250 106565 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIQVDGK [R].sIQVDGk.[T] N-Term(TMT6plex); K7(TMT6plex) 8 Q78ZJ8 RAB11B protein OS=Mus musculus OX=10090 GN=Rab11b PE=1 SV=1 Q78ZJ8; E9Q3P9; G3UY29; Q0PD45; A0A068BFR3; Q3UZ37; G3UZD3; F8WGS1 RAB11B protein OS=Mus musculus OX=10090 GN=Rab11b PE=1 SV=1; Ras-related protein Rab-11A OS=Mus musculus OX=10090 GN=Rab11a PE=4 SV=1; Ras-related protein Rab-11B OS=Mus musculus OX=10090 GN=Rab11b PE=4 SV=1; Rab11A OS=Mus musculus OX=10090 GN=Rab11a PE=1 SV=1; RAS oncogene family protein OS=Mus musculus OX=10090 GN=Rab11b PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab11b PE=2 SV=1; Ras-related protein Rab-11B OS=Mus musculus OX=10090 GN=Rab11b PE=1 SV=1; Ras-related protein Rab-11A (Fragment) OS=Mus musculus OX=10090 GN=Rab11a PE=4 SV=1 0 2 2 0.4393 0 1 1 1 602.86902 1204.73076 1204.73016 0.5 0.0003 0/0 0 0 71810216 HCD 30 MS2 25.00901 1045.4 16.811 71.5225 21689 21689 21686 QEplus033719.raw F4 1122 884.3 1154.4 887.1 1136.6 1087.9 492 2.39 1 FALSE 0.0007056 0.01018 0.401 -250 106574 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIQEMQQK [K].tIQEMQQk.[L] N-Term(TMT6plex); K8(TMT6plex) 5 Q3ULT2 Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1 A0A1L1SV25; Q3UDJ7; Q3ULT2; Q1A602; E9Q2W9 Alpha-actinin-4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Alpha-actinin-4 (Fragment) OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1 0 3 3 0.4702 0 1 1 1 488.61536 1463.83152 1463.82922 1.57 0.00077 0/0 0 0 45432880 HCD 30 MS2 14.20926 1101.8 59.522 71.5248 21690 21690 21686 QEplus033719.raw F4 1050.6 1005 1262.1 845.8 1279.6 1167.6 432 3.36 1 FALSE 0.0006294 0.009531 0.412 -250 106615 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGYLLK [R].rGYLLk.[Q] N-Term(TMT6plex); K6(TMT6plex) 9 Q3TEA8 Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1 Q3TEA8; Q3TEA8-3; A2AM63; A2AM65; A2AM62; Z4YKB8; Q3TEA8-2; Q3B7C1; Z4YKA3 Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1; Isoform 3 of Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3; Heterochromatin protein 1-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1; Heterochromatin protein 1-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1; Heterochromatin protein 1-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1; Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1; Isoform 2 of Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3; Heterochromatin protein 1-binding protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Hp1bp3 PE=2 SV=1; Heterochromatin protein 1-binding protein 3 OS=Mus musculus OX=10090 GN=Hp1bp3 PE=1 SV=1 1 3 3 0.262 0 1 1 1 403.26834 1207.79047 1207.7927 -1.85 -0.00074 0/0 0 0 4505241.5 HCD 30 MS2 62.49216 491.5 110 71.5393 21696 21696 21686 QEplus033719.raw F4 433.5 503.5 603 400.7 518 490.3 87 2.71 1 FALSE 0.001142 0.01534 0.329 -250 106631 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALDGYSK [K].aLDGYSk.[K] N-Term(TMT6plex); K7(TMT6plex) 6 P17427; P17426 AP-2 complex subunit alpha-2 OS=Mus musculus OX=10090 GN=Ap2a2 PE=1 SV=2;AP-2 complex subunit alpha-1 OS=Mus musculus OX=10090 GN=Ap2a1 PE=1 SV=1 A0A0J9YUA7; Q3U7X9; P17426-2; P17427; Q69ZW4; P17426 AP-2 complex subunit alpha-2 (Fragment) OS=Mus musculus OX=10090 GN=Ap2a2 PE=1 SV=1; AP-2 complex subunit alpha OS=Mus musculus OX=10090 GN=Ap2a2 PE=2 SV=1; Isoform B of AP-2 complex subunit alpha-1 OS=Mus musculus OX=10090 GN=Ap2a1; AP-2 complex subunit alpha-2 OS=Mus musculus OX=10090 GN=Ap2a2 PE=1 SV=2; MKIAA0899 protein (Fragment) OS=Mus musculus OX=10090 GN=Ap2a2 PE=2 SV=1; AP-2 complex subunit alpha-1 OS=Mus musculus OX=10090 GN=Ap2a1 PE=1 SV=1 0 2 2 0.4104 0 1 1 1 606.3562 1211.70513 1211.70361 1.25 0.00076 0/0 0 0 26722998 HCD 30 MS2 13.41179 1450.3 78.484 71.5489 21699 21699 21697 QEplus033719.raw F4 1509.2 1403 1552.4 1122.6 1759.2 1355.4 273 2.51 2 FALSE 0.0005174 0.008151 0.436 -250 106668 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLLVHAPEDKK [R].hLLVHAPEDkk.[E] N-Term(TMT6plex); K10(TMT6plex); K11(TMT6plex) 5 Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1;ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TS02; Q3TED3; Q3UEA1; Q3V117; Q91V92 ATP citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate (pro-S-)-lyase (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 1 5 5 0.6368 0 1 1 1 395.64825 1974.21217 1974.21034 0.92 0.00036 0/0 0 0 9123728 HCD 30 MS2 24.8865 507.2 100.484 71.5603 21704 21704 21697 QEplus033719.raw F4 459.9 523.7 707.8 383.7 400.6 567.7 314 3.91 2 FALSE 1.14E-05 1.20E-08 1.602 -250 106693 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQIGAQEGGPFR [R].qQIGAQEGGPFR.[A] N-Term(TMT6plex) 1 Q9DCI9 "39S ribosomal protein L32, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl32 PE=1 SV=1" Q9DCI9 "39S ribosomal protein L32, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl32 PE=1 SV=1" 0 2 2 0.5914 0 1 1 1 758.90759 1516.80791 1516.80696 0.63 0.00048 0/0 0 0 2740631.75 HCD 30 MS2 0 185.3 110 71.5678 21707 21707 21697 QEplus033719.raw F4 185.1 154.7 205.5 168.4 171.9 226.1 287 3.72 1 FALSE 1.14E-05 7.80E-09 1.638 -250 106717 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLSSGVSEIR [R].qLSSGVSEIR.[Q] N-Term(TMT6plex) 4 Q545F4 Heat shock 27 kDa protein OS=Mus musculus OX=10090 GN=Hspb1 PE=2 SV=1 Q545F4; D3YZ06; P14602-3; P14602-2 Heat shock 27 kDa protein OS=Mus musculus OX=10090 GN=Hspb1 PE=2 SV=1; Heat shock protein beta-1 OS=Mus musculus OX=10090 GN=Hspb1 PE=1 SV=1; Isoform C of Heat shock protein beta-1 OS=Mus musculus OX=10090 GN=Hspb1; Isoform B of Heat shock protein beta-1 OS=Mus musculus OX=10090 GN=Hspb1 0 2 2 0.4957 0 1 1 1 652.87384 1304.7404 1304.73715 2.5 0.00163 0/0 0 0 13574611 HCD 30 MS2 38.49549 967.9 110 71.5799 21711 21711 21708 QEplus033719.raw F4 1017.8 779.2 1068.3 806 953.7 1182.1 397 3.49 1 FALSE 1.14E-05 5.67E-06 1.094 -250 106732 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVFERPSAK [R].dVFERPSAk.[K] N-Term(TMT6plex); K9(TMT6plex) 1 C0HKD9 Microfibrillar-associated protein 1B OS=Mus musculus OX=10090 GN=Mfap1b PE=1 SV=1 C0HKD9 Microfibrillar-associated protein 1B OS=Mus musculus OX=10090 GN=Mfap1b PE=1 SV=1 0 3 3 0.2367 0 1 1 1 502.96133 1506.86945 1506.86805 0.93 0.00047 0/0 0 0 10425913 HCD 30 MS2 55.16206 1347.8 110 71.5849 21713 21713 21708 QEplus033719.raw F4 1273 1092.2 1380.7 1059.4 1840.9 1440.5 448 2.07 1 FALSE 0.001343 0.01873 0.292 -250 106739 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSSVGSSSSYPISSAGPR [R].sSSVGSSSSYPISSAGPR.[T] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.7768 0 1 1 1 647.99536 1941.97153 1941.97151 0.01 0.00001 0/0 0 0 9112365 HCD 30 MS2 18.91638 438.8 110 71.5874 21714 21714 21708 QEplus033719.raw F4 397.7 352.2 448.9 404.4 465.9 563.8 213 5.78 2 FALSE 1.14E-05 1.31E-12 2.354 -250 106777 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVTGTTSETIK [K].nVTGTTSETIk.[V] N-Term(TMT6plex); K11(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.6358 0 1 1 1 804.96545 1608.92363 1608.92087 1.72 0.00138 0/0 0 0 7323674.5 HCD 30 MS2 10.74808 353 110 71.6073 21721 21721 21719 QEplus033719.raw F4 399.8 71.7 266.5 690.1 110.2 579.6 464 4.64 2 FALSE 1.14E-05 3.99E-10 1.883 -250 106782 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKDSEAELQR [K].lkDSEAELQR.[R] N-Term(TMT6plex); K2(TMT6plex) 5 E9Q1G8 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2 E9Q1G8; Q8C2A3; E9Q9F5; Q3UNN1; O55131 Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=2; Septin OS=Mus musculus OX=10090 GN=Septin7 PE=2 SV=1; Septin-7 OS=Mus musculus OX=10090 GN=Septin7 PE=1 SV=1 1 3 3 0.5116 0 1 1 1 549.6546 1646.94925 1646.94776 0.91 0.0005 0/0 0 0 21964510 HCD 30 MS2 45.80103 1273.1 58.748 71.6096 21722 21722 21719 QEplus033719.raw F4 1308.9 915.7 1364.1 1418.9 940.3 1690.8 432 3.01 1 FALSE 1.14E-05 0.000278 0.772 -250 106789 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELPRPEGLQR [R].eLPRPEGLQR.[L] N-Term(TMT6plex) 4 Q64105 Sepiapterin reductase OS=Mus musculus OX=10090 GN=Spr PE=1 SV=1 Q64105; G3UXX3; Q91XH5; G3UZ79 Sepiapterin reductase OS=Mus musculus OX=10090 GN=Spr PE=1 SV=1; Sepiapterin reductase OS=Mus musculus OX=10090 GN=Spr PE=1 SV=1; Sepiapterin reductase OS=Mus musculus OX=10090 GN=Spr PE=1 SV=1; Sepiapterin reductase OS=Mus musculus OX=10090 GN=Spr PE=1 SV=1 0 3 3 0.4872 0 1 1 1 475.27988 1423.82508 1423.82188 2.25 0.00107 0/0 0 0 15228740 HCD 30 MS2 19.51591 960.4 110 71.6121 21723 21723 21719 QEplus033719.raw F4 974.2 838.6 1044 794.9 1073.8 1036.8 341 3.12 1 FALSE 1.14E-05 0.0007888 0.683 -250 106804 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQGTADFLPNRPR [K].nQGTADFLPNRPR.[H] N-Term(TMT6plex) 2 A0A0R4J0Q4 Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Loxl1 PE=1 SV=1 A0A0R4J0Q4; P97873 Lysyl oxidase homolog OS=Mus musculus OX=10090 GN=Loxl1 PE=1 SV=1; Lysyl oxidase homolog 1 OS=Mus musculus OX=10090 GN=Loxl1 PE=2 SV=3 0 3 3 0.6848 0 1 1 1 572.31177 1714.92075 1714.91863 1.23 0.00071 0/0 0 0 2481010.5 HCD 30 MS2 53.64271 665.7 110 71.6171 21725 21725 21719 QEplus033719.raw F4 642.8 589.1 713.5 505.8 776.8 766.3 353 4.22 1 FALSE 1.14E-05 6.03E-08 1.469 -250 106818 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTGKPIEASIR [K].tTGkPIEASIR.[GE] N-Term(TMT6plex); K4(TMT6plex) 8 P14824; Q99JX6 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3;Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 Q3V2Z4; P14824; F8WIT2; Q3UI56; Q3TUI1; Q8CEX0; Q99JX6; Q3UDK4 Annexin OS=Mus musculus OX=10090 PE=2 SV=1; Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 0 2 2 0.637 0 1 1 1 815.99908 1630.99089 1630.98923 1.02 0.00083 0/0 0 0 11419653 HCD 30 MS2 6.011672 408.9 110 71.6221 21727 21727 21719 QEplus033719.raw F4 405.3 373.4 378.2 325 553.3 418.2 326 2.7 2 FALSE 1.14E-05 3.10E-08 1.524 -250 106827 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQTSNFK [K].vQTSNFk.[D] N-Term(TMT6plex); K7(TMT6plex) 8 E9Q6R7 Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 O08614; Q6P6L2; A0A1W2P8A5; Q3TR59; A0A1W2P8G5; Q3UYS4; Q810I5; E9Q6R7 Cytoskeletal protein OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrn protein (Fragment) OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrophin (Fragment) OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrophin (Fragment) OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrn protein (Fragment) OS=Mus musculus OX=10090 GN=Utrn PE=2 SV=1; Utrophin OS=Mus musculus OX=10090 GN=Utrn PE=1 SV=1 0 2 2 0.4917 0 1 1 1 641.38403 1281.76079 1281.75671 3.18 0.00204 0/0 0 0 7926064.5 HCD 30 MS2 19.83241 874.8 110 71.6246 21728 21728 21719 QEplus033719.raw F4 894 697.3 976.2 731.9 907.8 1041.8 254 2.42 1 FALSE 0.001894 0.03203 0.207 -250 106853 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGTVLCK [K].dGTVLck.[L] N-Term(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex) 2 Q9WVA4 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4 Q9WVA4; A0A0A6YXG6 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4; Transgelin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=1 0 2 2 0.5259 0 1 1 1 625.86334 1250.71941 1250.71788 1.22 0.00076 0/0 0 0 82151920 HCD 30 MS2 7.451922 1031.1 23.059 71.6367 21732 21732 21730 QEplus033719.raw F4 1015.3 1052.6 958.4 638.7 1678.8 842.8 377 2.7 1 FALSE 0.0007816 0.01086 0.391 -250 106861 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FIDEHATK [K].fIDEHATk.[R] N-Term(TMT6plex); K8(TMT6plex) 2 A0A0R4J0Z1 Protein disulfide-isomerase A4 OS=Mus musculus OX=10090 GN=Pdia4 PE=1 SV=1 A0A0R4J0Z1; P08003 Protein disulfide-isomerase A4 OS=Mus musculus OX=10090 GN=Pdia4 PE=1 SV=1; Protein disulfide-isomerase A4 OS=Mus musculus OX=10090 GN=Pdia4 PE=1 SV=3 0 3 3 0.5319 0 1 1 1 473.60699 1418.80643 1418.80439 1.44 0.00068 0/0 0 0 27410760 HCD 30 MS2 42.25273 1401.1 58.662 71.639 21733 21733 21730 QEplus033719.raw F4 1583.9 1122.8 1442.7 1282.3 1719.2 1255.6 482 2.35 1 FALSE 0.0003312 0.006361 0.471 -250 106869 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLNHPNVIK [K].qLNHPNVIk.[Y] N-Term(TMT6plex); K9(TMT6plex) 3 Q9ES74 Serine/threonine-protein kinase Nek7 OS=Mus musculus OX=10090 GN=Nek7 PE=1 SV=1 Q8C5F7; Q3TN15; Q9ES74 Protein kinase domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Serine/threonine-protein kinase Nek7 OS=Mus musculus OX=10090 GN=Nek7 PE=1 SV=1; Serine/threonine-protein kinase Nek7 OS=Mus musculus OX=10090 GN=Nek7 PE=1 SV=1 0 3 3 0.3473 0 1 1 1 507.64966 1520.93442 1520.93132 2.04 0.00103 0/0 0 0 16354087 HCD 30 MS2 49.11661 856.8 74.612 71.6412 21734 21734 21730 QEplus033719.raw F4 879.3 752 876.2 665.4 1066.7 901.4 411 3.34 1 FALSE 0.0007816 0.01083 0.391 -250 106885 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARPTTDSFDDYPPR [R].aRPTTDSFDDYPPR.[R] N-Term(TMT6plex) 6 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 0 3 3 0.7077 0 1 1 1 622.97827 1866.92026 1866.91836 1.02 0.00063 0/0 0 0 8334972 HCD 30 MS2 40.31199 656.7 110 71.6462 21736 21736 21730 QEplus033719.raw F4 721.9 447.4 650.1 449.5 795.6 876 176 4.31 1 FALSE 1.14E-05 2.09E-08 1.556 -250 106891 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HAEQNGPVDGQGDNPGSQAAEHGADTAVPSDGDK [K].hAEQNGPVDGQGDNPGSQAAEHGADTAVPSDGDk.[K] N-Term(TMT6plex); K34(TMT6plex) 4 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 0 4 4 0.904 0 1 1 1 947.44934 3786.77553 3786.75918 4.32 0.00409 0/0 0 0 2506964.25 HCD 30 MS2 0 73.7 110 71.6488 21737 21737 21730 QEplus033719.raw F4 83.4 56.5 94.1 65.9 71.9 70.2 85 10.83 1 FALSE 1.14E-05 6.31E-16 5.281 -250 106897 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSSVGSSSSYPISSAGPR [R].sSSVGSSSSYPISSAGPR.[T] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.8179 0 1 1 1 971.49054 1941.9738 1941.97151 1.18 0.00114 0/0 0 0 5798967.5 HCD 30 MS2 0 155.2 110 71.6513 21738 21738 21730 QEplus033719.raw F4 138.6 216.2 152 164.7 142.5 117.2 217 5.6 2 FALSE 1.14E-05 6.31E-16 3.88 -250 106902 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDINSLNK [K].qDINSLNk.[Q] N-Term(TMT6plex); K8(TMT6plex) 6 H3BJ02 Syntaxin 5A OS=Mus musculus OX=10090 GN=Stx5a PE=1 SV=1 H3BJ02; I1E4X1; Q8K1E0-2; H3BKJ7; Q8K1E0; H3BJE3 Syntaxin 5A OS=Mus musculus OX=10090 GN=Stx5a PE=1 SV=1; Syntaxin 5A OS=Mus musculus OX=10090 GN=Stx5a PE=1 SV=1; Isoform 2 of Syntaxin-5 OS=Mus musculus OX=10090 GN=Stx5; Syntaxin 5A OS=Mus musculus OX=10090 GN=Stx5a PE=1 SV=1; Syntaxin-5 OS=Mus musculus OX=10090 GN=Stx5 PE=1 SV=3; Syntaxin 5A (Fragment) OS=Mus musculus OX=10090 GN=Stx5a PE=1 SV=1 0 2 2 0.2218 0 1 1 1 695.41064 1389.81401 1389.8102 2.74 0.00191 0/0 0 0 4391247 HCD 30 MS2 30.50341 465.4 110 71.6538 21739 21739 21730 QEplus033719.raw F4 457 442 526.4 363.5 536.9 466.3 480 2.39 1 FALSE 1.14E-05 0.0002563 0.779 -250 106915 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AFFHDVR [K].aFFHDVR.[E] N-Term(TMT6plex) 8 A2AP29 Antiviral innate immune response receptor RIG-I (Fragment) OS=Mus musculus OX=10090 GN=Ddx58 PE=1 SV=1 A2AP29; Q3KQQ7; Q6Q899-2; A7YY79; Q6Q899; Q3U1I9; Q05CC6; A1L0V6 Antiviral innate immune response receptor RIG-I (Fragment) OS=Mus musculus OX=10090 GN=Ddx58 PE=1 SV=1; Ddx58 protein (Fragment) OS=Mus musculus OX=10090 GN=Ddx58 PE=2 SV=1; Isoform 2 of Antiviral innate immune response receptor RIG-I OS=Mus musculus OX=10090 GN=Ddx58; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx58 PE=2 SV=1; Antiviral innate immune response receptor RIG-I OS=Mus musculus OX=10090 GN=Ddx58 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ddx58 PE=2 SV=1; Ddx58 protein (Fragment) OS=Mus musculus OX=10090 GN=Ddx58 PE=2 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx58 PE=2 SV=1 0 3 3 0.5597 0 1 1 1 374.20941 1120.61368 1120.61009 3.2 0.0012 0/0 0 0 1509826.25 HCD 30 MS2 84.70834 370.9 110 71.6636 21742 21742 21741 QEplus033719.raw F4 342.6 312.8 426.8 312.7 407.7 422.7 219 2.43 1 FALSE 0.002509 0.04932 0.144 -250 106922 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNVEQDLK [K].nNVEQDLk.[E] N-Term(TMT6plex); K8(TMT6plex) 6 F6W2Q5 Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1 F6W2Q5; Q5JC28; P42567-2; P42567; H3BK65; A0A0R4J0A0 Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1; Epidermal growth factor receptor pathway substrate 15 isoform B OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1; Isoform 2 of Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15; Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1; Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1; Epidermal growth factor receptor substrate 15 OS=Mus musculus OX=10090 GN=Eps15 PE=1 SV=1 0 2 2 0.4896 0 1 1 1 709.40631 1417.80535 1417.80511 0.16 0.00012 0/0 0 0 4234713.5 HCD 30 MS2 0 344.7 110 71.6661 21743 21743 21741 QEplus033719.raw F4 357.9 301.9 372.2 288.8 380 367.5 454 2.88 1 FALSE 0.0003702 0.006954 0.459 -250 106933 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCDLVGEK [K].scDLVGEk.[D] N-Term(TMT6plex); C2(Carbamidomethyl); K8(TMT6plex) 2 Q3UF03 Uncharacterized protein OS=Mus musculus OX=10090 GN=M6pr PE=2 SV=1 Q3UF03; P24668 Uncharacterized protein OS=Mus musculus OX=10090 GN=M6pr PE=2 SV=1; Cation-dependent mannose-6-phosphate receptor OS=Mus musculus OX=10090 GN=M6pr PE=1 SV=1 0 2 2 0.4448 0 1 1 1 683.37622 1365.74516 1365.74482 0.25 0.00017 0/0 0 0 19436850 HCD 30 MS2 17.34909 1014.4 110 71.6709 21745 21745 21741 QEplus033719.raw F4 1065.8 893.1 1127.4 858.1 1082.6 1059.4 389 2.99 1 FALSE 1.14E-05 0.0002332 0.787 -250 106965 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGMPSGLAHR [K].mGMPSGLAHR.[I] N-Term(TMT6plex) 1 Q9DCC4 Pyrroline-5-carboxylate reductase 3 OS=Mus musculus OX=10090 GN=Pycr3 PE=1 SV=2 Q9DCC4 Pyrroline-5-carboxylate reductase 3 OS=Mus musculus OX=10090 GN=Pycr3 PE=1 SV=2 0 3 3 0.7235 0 1 1 1 429.22891 1285.67218 1285.67066 1.18 0.00051 0/0 0 0 11122018 HCD 30 MS2 26.53819 406.9 90.317 71.6802 21749 21749 21741 QEplus033719.raw F4 388.9 274.4 409.5 328.7 456.9 582.8 147 3.87 1 FALSE 1.14E-05 1.36E-08 1.592 -250 106971 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGSTSENITQK [R].vGSTSENITQk.[V] N-Term(TMT6plex); K11(TMT6plex) 6 B9EKE9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1 B9EKE9; B7ZWF1; Q62095; Q3TQX5; P16381; Q3U484 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; ATP-dependent RNA helicase DDX3Y OS=Mus musculus OX=10090 GN=Ddx3y PE=1 SV=2; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=1; Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus OX=10090 GN=D1Pas1 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3y PE=2 SV=1 0 2 2 0.6979 0 1 1 1 811.46216 1621.91704 1621.91612 0.57 0.00046 0/0 0 0 10204002 HCD 30 MS2 25.2578 593.5 110 71.6827 21750 21750 21741 QEplus033719.raw F4 612.4 611.8 666.9 378.7 727.1 564.2 448 3.84 1 FALSE 1.14E-05 7.20E-10 1.834 -250 106978 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADVDAATLAR [R].aDVDAATLAR.[I] N-Term(TMT6plex) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 3 3 0.5455 0 1 1 1 411.23325 1231.68518 1231.68438 0.65 0.00027 0/0 0 0 8882075 HCD 30 MS2 42.80354 553.4 110 71.6852 21751 21751 21741 QEplus033719.raw F4 587.6 355.7 580.8 550.4 513.6 732.1 391 3.3 1 FALSE 1.14E-05 0.0001632 0.816 -250 106984 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIGESVPEPR [K].sIGESVPEPR.[I] N-Term(TMT6plex) 1 Q8BTZ7 Mannose-1-phosphate guanyltransferase beta OS=Mus musculus OX=10090 GN=Gmppb PE=1 SV=1 Q8BTZ7 Mannose-1-phosphate guanyltransferase beta OS=Mus musculus OX=10090 GN=Gmppb PE=1 SV=1 0 2 2 0.5086 0 1 1 1 650.35925 1299.71123 1299.7106 0.49 0.00032 0/0 0 0 7121119 HCD 30 MS2 18.81958 559.2 110 71.6925 21753 21753 21752 QEplus033719.raw F4 554.7 451 601.1 478.1 667.7 602.8 270 2.91 1 FALSE 1.14E-05 5.31E-05 0.91 -250 106992 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTYSTEPNNLK [K].qTYSTEPNNLk.[A] N-Term(TMT6plex); K11(TMT6plex) 2 Q5M9N5 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1 Q5M9N5; Q5M9J8 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1; 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1 0 2 2 0.6881 0 1 1 1 876.9806 1752.95392 1752.95323 0.39 0.00034 0/0 0 0 0 HCD 30 MS2 190.6 110 71.6951 21754 21754 21752 QEplus033719.raw F4 164.3 175.4 218 162.9 214.9 208.4 406 4.36 1 FALSE 1.14E-05 1.67E-10 1.955 -250 106999 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLTGSPGSPGPDGK [K].gLTGSPGSPGPDGk.[T] N-Term(TMT6plex); K14(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 3 3 0.5784 0 1 1 1 562.31653 1684.93503 1684.92702 4.75 0.00267 0/0 0 0 95313880 HCD 30 MS2 24.27281 616.5 14.879 71.6973 21755 21755 21752 QEplus033719.raw F4 566.6 628.3 737.5 330.8 759.9 675.9 379 4.08 1 FALSE 1.14E-05 1.47E-10 1.965 -250 107012 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEDVLK [K].eEDVLk.[F] N-Term(TMT6plex); K6(TMT6plex) 3 P14206 40S ribosomal protein SA OS=Mus musculus OX=10090 GN=Rpsa PE=1 SV=4 P14206; B2CY77; A0A1L1SUK3 40S ribosomal protein SA OS=Mus musculus OX=10090 GN=Rpsa PE=1 SV=4; Laminin receptor (Fragment) OS=Mus musculus OX=10090 GN=Rpsa PE=2 SV=1; 40S ribosomal protein SA OS=Mus musculus OX=10090 GN=Rpsa PE=1 SV=1 0 2 2 0.1182 0 1 1 1 595.85559 1190.70391 1190.70328 0.53 0.00031 0/0 0 0 31686134 HCD 30 MS2 30.97862 1222.5 41.888 71.7019 21757 21757 21752 QEplus033719.raw F4 1329.2 868.5 1361.2 964.2 1241.4 1570.8 445 2.03 1 FALSE 0.004449 0.07978 0.062 -250 107030 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIVCNTK [R].vIVcNTk.[Q] N-Term(TMT6plex); C4(Carbamidomethyl); K7(TMT6plex) 3 Q3V471 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1 Q3V471; P16110; Q8C253 Galectin (Fragment) OS=Mus musculus OX=10090 GN=Lgals3 PE=2 SV=1; Galectin-3 OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=3; Galectin OS=Mus musculus OX=10090 GN=Lgals3 PE=1 SV=1 0 2 2 0.3529 0 1 1 1 646.39435 1291.78142 1291.78081 0.47 0.0003 0/0 0 0 14137159 HCD 30 MS2 50.3144 1059.2 110 71.7066 21759 21759 21752 QEplus033719.raw F4 1260.9 827.7 1006.3 960.1 1233.8 1066.2 347 2.38 1 FALSE 0.0003496 0.0067 0.464 -250 107040 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADDASAATIEK [K].aDDASAATIEk.[K] N-Term(TMT6plex); K11(TMT6plex) 3 Q3U6Q1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Wbp11 PE=2 SV=1 Q3U6Q1; Q923D5; Q3UKQ3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Wbp11 PE=2 SV=1; WW domain-binding protein 11 OS=Mus musculus OX=10090 GN=Wbp11 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Wbp11 PE=2 SV=1 0 2 2 0.6118 0 1 1 1 775.42828 1549.84929 1549.84737 1.24 0.00096 0/0 0 0 3902965.5 HCD 30 MS2 0 315 110 71.7091 21760 21760 21752 QEplus033719.raw F4 328.3 296.3 318.6 228.4 412.8 305.8 377 3.89 1 FALSE 1.14E-05 3.88E-10 1.885 -250 107048 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYQLNDSAK [R].eYQLNDSAk.[Y-] N-Term(TMT6plex); K9(TMT6plex) 4 P18872-2 Isoform Alpha-2 of Guanine nucleotide-binding protein G(o) subunit alpha OS=Mus musculus OX=10090 GN=Gnao1 D3Z2M7; P18872-2; P18872; F7BLT7 Guanine nucleotide-binding protein G(o) subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Gnao1 PE=1 SV=1; Isoform Alpha-2 of Guanine nucleotide-binding protein G(o) subunit alpha OS=Mus musculus OX=10090 GN=Gnao1; Guanine nucleotide-binding protein G(o) subunit alpha OS=Mus musculus OX=10090 GN=Gnao1 PE=1 SV=3; Guanine nucleotide-binding protein G(o) subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Gnao1 PE=1 SV=1 0 2 2 0.5253 0 1 1 1 763.41644 1525.82561 1525.82624 -0.42 -0.00032 0/0 0 0 2489845.75 HCD 30 MS2 0 366.8 110 71.7117 21761 21761 21752 QEplus033719.raw F4 328.2 348.3 425.9 346.9 358.7 392.6 319 3.16 1 FALSE 0.0008183 0.01134 0.383 -250 107068 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MAGDPVANVR [R].mAGDPVANVR.[F] N-Term(TMT6plex) 2 Q76MZ3 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=3 Q8C2E1; Q76MZ3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppp2r1a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=3 0 2 2 0.4528 0 1 1 1 629.84277 1258.67827 1258.67752 0.59 0.00037 0/0 0 0 79251456 HCD 30 MS2 12.48749 841.6 36.572 71.7235 21765 21765 21763 QEplus033719.raw F4 861.8 673.6 880 638.2 1119.5 876.5 252 3.6 1 FALSE 1.14E-05 6.36E-07 1.275 -250 107073 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EKPLVQEK [K].ekPLVQEk.[Q] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 5 Q8CBM0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1 Q8CBM0; Q3TCR9; Q8CD55; Q62523; Q7TQE2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Zyxin OS=Mus musculus OX=10090 GN=Zyx PE=1 SV=2; Zyx protein OS=Mus musculus OX=10090 GN=Zyx PE=1 SV=1 0 3 3 0.4896 0 1 1 1 553.35388 1658.04709 1658.04557 0.92 0.00051 0/0 0 0 212803232 HCD 30 MS2 44.50189 934.1 6.173 71.7258 21766 21766 21763 QEplus033719.raw F4 919.1 1035.4 1031 606.2 1186.5 826.5 220 3.35 1 FALSE 1.14E-05 6.92E-05 0.888 -250 107102 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVQPTSEERIPK [K].sVQPTSEERIPk.[T] N-Term(TMT6plex); K12(TMT6plex) 6 Q80UG5 Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 A2A6U5; Q80UG5-3; Q80UG5; A2A6U3; Q80UG5-2; Q3TDR9 Septin-9 (Fragment) OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Isoform 3 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Isoform 2 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-type G domain-containing protein OS=Mus musculus OX=10090 GN=Septin9 PE=2 SV=1 1 3 3 0.7694 0 1 1 1 610.35681 1829.05588 1829.05328 1.42 0.00087 0/0 0 0 18025036 HCD 30 MS2 15.55591 911.2 107.914 71.7328 21769 21769 21763 QEplus033719.raw F4 952.1 956.1 1063.8 574.2 1143.7 777.6 396 4.25 1 FALSE 1.14E-05 4.65E-07 1.3 -250 107109 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIDCAQVYQNEK [R].hIDcAQVYQNEk.[E] N-Term(TMT6plex); C4(Carbamidomethyl); K12(TMT6plex) 5 Q3UDY1 Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1 Q3TCL2; D3YVJ7; Q3ULP0; Q3UDY1; Q5U415 "Aldo_ket_red domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1; Aldo-keto reductase family 1, member B3 (aldose reductase) (Fragment) OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1; Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1; Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1; Aldo-keto reductase family 1, member B3 (Aldose reductase) OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1" 0 3 3 0.7514 0 1 1 1 655.00842 1963.01072 1963.01077 -0.03 -0.00002 0/0 0 0 12689828 HCD 30 MS2 34.48151 993 110 71.7353 21770 21770 21763 QEplus033719.raw F4 981.6 818.6 1100.8 914.7 1011.4 1131.1 303 5.43 1 FALSE 1.14E-05 5.80E-09 1.662 -250 107118 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EKPLVQEK [K].ekPLVQEk.[Q] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 5 Q8CBM0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1 Q8CBM0; Q3TCR9; Q8CD55; Q62523; Q7TQE2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Zyx PE=2 SV=1; Zyxin OS=Mus musculus OX=10090 GN=Zyx PE=1 SV=2; Zyx protein OS=Mus musculus OX=10090 GN=Zyx PE=1 SV=1 0 2 2 0.4728 0 1 1 1 829.52594 1658.0446 1658.04557 -0.58 -0.00048 0/0 0 0 6927719.5 HCD 30 MS2 17.5608 407.8 110 71.7378 21771 21771 21763 QEplus033719.raw F4 417.6 467.4 453.7 248.7 507.1 352.3 213 2.94 1 FALSE 3.35E-05 0.001269 0.641 -250 107144 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVVPCCSGPK [K].tVVPccSGPk.[R] N-Term(TMT6plex); C5(Carbamidomethyl); C6(Carbamidomethyl); K10(TMT6plex) 2 Q8VDC3 Citrate hydro-lyase OS=Mus musculus OX=10090 GN=aco1 PE=3 SV=1 Q8VDC3; P28271 Citrate hydro-lyase OS=Mus musculus OX=10090 GN=aco1 PE=3 SV=1; Cytoplasmic aconitate hydratase OS=Mus musculus OX=10090 GN=Aco1 PE=1 SV=3 0 2 2 0.5645 0 1 1 1 781.92548 1562.84368 1562.84349 0.12 0.00009 0/0 0 0 2123930.5 HCD 30 MS2 76.73492 276.9 110 71.7502 21775 21775 21774 QEplus033719.raw F4 283.4 264.8 325.3 213.7 293.7 280.3 361 3.1 1 FALSE 1.14E-05 3.84E-06 1.126 -250 107161 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GASIVEDK [R].gASIVEDk.[L] N-Term(TMT6plex); K8(TMT6plex) 1 P26443 "Glutamate dehydrogenase 1, mitochondrial OS=Mus musculus OX=10090 GN=Glud1 PE=1 SV=1" P26443 "Glutamate dehydrogenase 1, mitochondrial OS=Mus musculus OX=10090 GN=Glud1 PE=1 SV=1" 0 2 2 0.3897 0 1 1 1 638.87921 1276.75115 1276.75129 -0.11 -0.00007 0/0 0 0 98387872 HCD 30 MS2 49.88591 1464 24.666 71.7547 21777 21777 21774 QEplus033719.raw F4 1379.5 1324.3 1729.5 1158.5 1691.7 1500.7 449 2.72 1 FALSE 5.44E-05 0.001944 0.601 -250 107185 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MSTEEIVQR [K-].mSTEEIVQR.[T] N-Term(TMT6plex) 11 O88685 26S proteasome regulatory subunit 6A OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=2 Q3TKC2; Q3THI5; A0A087WPH7; O88685; F6Q2E3; A2AGN7; B7ZCF1; Q8BUP7; Q3U8Y7; Q3TKG4; Q3UD94 AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1; AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1; 26S proteasome regulatory subunit 6A (Fragment) OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=6; 26S proteasome regulatory subunit 6A OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=2; 26S proteasome regulatory subunit 6A (Fragment) OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=1; 26S proteasome regulatory subunit 6A OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=1; 26S proteasome regulatory subunit 6A OS=Mus musculus OX=10090 GN=Psmc3 PE=1 SV=1; AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1; AAA domain-containing protein OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1; AAA domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1; AAA domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc3 PE=2 SV=1 0 2 2 0.4607 0 1 1 1 661.35229 1321.69731 1321.69832 -0.76 -0.0005 0/0 0 0 28631946 HCD 30 MS2 19.8493 878 77.522 71.7637 21781 21781 21774 QEplus033719.raw F4 875.8 750.9 1008 763.2 872.9 996.9 283 3.56 1 FALSE 1.14E-05 2.79E-06 1.153 -250 107195 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FKDPNAPK [K].fkDPNAPk.[R] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 12 Q8BNM0 High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 Q8BQ02; Q8BNM0; Q6P202; Q58EV5; Q80YZ1; Q3UJK0; Q8C7C4; D3YZ18; Q3UBK2; A0A0J9YUZ4; A0A0J9YUD8; Q497Z6 High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=bM168F16.1 PE=3 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=8; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein B1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 1 3 3 0.5719 0 1 1 1 535.33081 1603.97788 1603.97749 0.24 0.00013 0/0 0 0 16769483 HCD 30 MS2 42.73686 1393.7 91.249 71.766 21782 21782 21774 QEplus033719.raw F4 1470.7 1569.4 1450.7 878.7 1805.2 1187.7 363 3.2 1 FALSE 2.26E-05 0.001076 0.656 -250 107204 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSVTTPAALSR [R].tSVTTPAALSR.[A] N-Term(TMT6plex) 8 O08784 Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 Q3TBZ3; H3BIX0; Q05BH6; F6R3V4; O08784; Q7TPZ2; Q3TAB2; H3BL37 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 0 2 2 0.4728 0 1 1 1 666.88538 1332.76348 1332.76845 -3.73 -0.00248 0/0 0 0 12287738 HCD 30 MS2 39.96173 1063.3 110 71.7685 21783 21783 21774 QEplus033719.raw F4 1056 886.5 1135.6 873.4 1204.4 1223.6 407 3.13 1 FALSE 1.14E-05 1.12E-08 1.608 -250 107212 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMALKK [K].nMALkk.[I] N-Term(TMT6plex); K5(TMT6plex); K6(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 1 3 3 0.3419 0 1 1 1 464.63879 1391.90183 1391.90115 0.49 0.00023 0/0 0 0 10264914 HCD 30 MS2 38.08421 1826.6 110 71.771 21784 21784 21774 QEplus033719.raw F4 2302.1 1443.7 1983.1 1692 1897.7 1641.1 168 1.55 1 FALSE 0.005221 0.08918 0.036 -250 107221 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQVANSAFVER [K].eQVANSAFVER.[V] N-Term(TMT6plex) 4 Q71LX8 Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q811H6; Q80YC2; Q71LX8; E9Q0C3 Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Hsp90ab1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; Heat shock protein HSP 90-beta (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 0 2 2 0.7313 0 1 1 1 739.89417 1478.78105 1478.78007 0.66 0.00049 0/0 0 0 71585856 HCD 30 MS2 1.348021 448.5 26.008 71.7783 21786 21786 21785 QEplus033719.raw F4 443 325.1 487.9 386.5 498.4 550.3 298 4.28 1 FALSE 1.14E-05 1.53E-09 1.772 -250 107237 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGSTSENITQK [R].vGSTSENITQk.[V] N-Term(TMT6plex); K11(TMT6plex) 6 B9EKE9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1 B9EKE9; B7ZWF1; Q62095; Q3TQX5; P16381; Q3U484 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; ATP-dependent RNA helicase DDX3Y OS=Mus musculus OX=10090 GN=Ddx3y PE=1 SV=2; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=1; Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus OX=10090 GN=D1Pas1 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3y PE=2 SV=1 0 3 3 0.5979 0 1 1 1 541.31158 1621.9202 1621.91612 2.51 0.00136 0/0 0 0 66483872 HCD 30 MS2 37.8086 903.5 26.723 71.7828 21788 21788 21785 QEplus033719.raw F4 901 787.2 1013.7 670.2 1129.2 919.7 488 3.78 1 FALSE 1.14E-05 2.78E-06 1.153 -250 107245 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASNGDAWVEAHGK [R].aSNGDAWVEAHGk.[L] N-Term(TMT6plex); K13(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 0 3 3 0.7624 0 1 1 1 600.65326 1799.94522 1799.94407 0.64 0.00039 0/0 0 0 56206032 HCD 30 MS2 2.894513 469.3 27.612 71.7851 21789 21789 21785 QEplus033719.raw F4 550.7 380.6 521.4 500.3 388.2 474.6 294 4.84 1 FALSE 1.14E-05 6.75E-16 2.98 -250 107251 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGKPHTVPCK [K].iGkPHTVPck.[V] N-Term(TMT6plex); K3(TMT6plex); C9(Carbamidomethyl); K10(TMT6plex) 10 Q3TXS9 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1 Q3TXS9; D3YVC1; Q3TLE5; Q3TI78; Q3TXR5; O89072; P25444; Q3TL20; D3YWJ3; Q3UB36 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 (Fragment) OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 (Fragment) OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=3; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1 0 4 4 0.5795 0 1 1 1 456.78369 1824.11294 1824.11327 -0.18 -0.00008 0/0 0 0 27472654 HCD 30 MS2 62.35053 1006.7 31.95 71.7874 21790 21790 21785 QEplus033719.raw F4 1017.8 697.9 1034.1 895 1147.6 1247.9 248 2.83 1 FALSE 0.001335 0.01847 0.295 -250 107260 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEGELK [K].mEGELk.[G] N-Term(TMT6plex); K6(TMT6plex) 2 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 A0PJF4; E9Q616 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 0 2 2 0.2332 0 1 1 1 582.83893 1164.67058 1164.66987 0.61 0.00036 0/0 0 0 22686028 HCD 30 MS2 9.338984 1765 91.319 71.7896 21791 21791 21785 QEplus033719.raw F4 1824.4 1730 1776.6 1397.5 2101.4 1760.1 346 1.93 1 FALSE 0.005628 0.09461 0.021 -250 107269 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVEDEPNK [R].iVEDEPNk.[I] N-Term(TMT6plex); K8(TMT6plex) 3 Q9ERK4 Exportin-2 OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1 E9QAX7; Q9ERK4; E9Q1T9 Exportin-2 OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1; Exportin-2 OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1; Chromosome segregation 1-like protein OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1 0 2 2 0.584 0 1 1 1 701.40332 1401.79936 1401.79897 0.28 0.0002 0/0 0 0 18109264 HCD 30 MS2 34.38844 975.8 110 71.7922 21792 21792 21785 QEplus033719.raw F4 1010 754.7 973.5 970.6 961.4 1184.6 350 2.62 1 FALSE 5.44E-05 0.002339 0.583 -250 107277 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVAEEPPGLR [K].aVAEEPPGLR.[S] N-Term(TMT6plex) 3 Q6P542 ATP-binding cassette sub-family F member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=1 SV=1 Q6P542; Q5RL55; A1A4B8 "ATP-binding cassette sub-family F member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=1 SV=1; ATP-binding cassette, sub-family F (GCN20), member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=2 SV=1; Abcf1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abcf1 PE=2 SV=1" 0 2 2 0.6392 0 1 1 1 634.36584 1267.72441 1267.72077 2.88 0.00182 0/0 0 0 14369936 HCD 30 MS2 34.91015 1296.5 110 71.7972 21794 21794 21785 QEplus033719.raw F4 1226.9 1098 1414 1161.1 1343.6 1535.5 307 3.52 1 FALSE 1.14E-05 4.33E-07 1.306 -250 107285 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQANPHLK [R].lQANPHLk.[E] N-Term(TMT6plex); K8(TMT6plex) 5 A0A0R4J050 N-acyl-L-amino-acid amidohydrolase OS=Mus musculus OX=10090 GN=Acy1 PE=1 SV=1 A0A0R4J050; Q99JW2; A0A1L1SRL5; A0A1L1SRW7; A0A1L1SS90 N-acyl-L-amino-acid amidohydrolase OS=Mus musculus OX=10090 GN=Acy1 PE=1 SV=1; Aminoacylase-1 OS=Mus musculus OX=10090 GN=Acy1 PE=1 SV=1; Aminoacylase-1 (Fragment) OS=Mus musculus OX=10090 GN=Acy1 PE=1 SV=1; N-acyl-L-amino-acid amidohydrolase OS=Mus musculus OX=10090 GN=Acy1 PE=1 SV=1; N-acyl-L-amino-acid amidohydrolase OS=Mus musculus OX=10090 GN=Acy1 PE=1 SV=1 0 3 3 0.4592 0 1 1 1 460.29022 1378.85611 1378.85709 -0.71 -0.00033 0/0 0 0 9162269 HCD 30 MS2 41.15754 915.4 110 71.7997 21795 21795 21785 QEplus033719.raw F4 981.4 729.4 983.4 877 919.1 1002.3 327 3.31 1 FALSE 1.14E-05 2.60E-05 0.969 -250 107294 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLVIQDK [K].rLVIQDk.[N] N-Term(TMT6plex); K7(TMT6plex) 3 P47962 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3 P47962; Q3TKR5; Q3U850 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3; Ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; Ribosomal_L18_c domain-containing protein OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1 1 3 3 0.3333 0 1 1 1 443.96109 1329.86872 1329.86184 5.17 0.00229 0/0 0 0 19421906 HCD 30 MS2 58.07832 626 31.15 71.807 21797 21797 21796 QEplus033719.raw F4 613.4 486.2 682.4 502.7 717.4 754.1 235 3.06 1 FALSE 0.001514 0.02276 0.259 -250 107304 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYLEDPEDER [R].nYLEDPEDER.[R] N-Term(TMT6plex) 1 F6RQN3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (Fragment) OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 F6RQN3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (Fragment) OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 0 2 2 0.6344 0 1 1 1 754.85785 1508.70842 1508.70663 1.19 0.00089 0/0 0 0 14666018 HCD 30 MS2 0 402.8 110 71.8095 21798 21798 21796 QEplus033719.raw F4 438.8 93.6 276 839.6 118.7 650.3 59 3.2 1 FALSE 1.14E-05 1.11E-07 1.419 -250 107310 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSAKPAPAK [R].lSAkPAPAk.[V] N-Term(TMT6plex); K4(TMT6plex); K9(TMT6plex) 1 P18608 Non-histone chromosomal protein HMG-14 OS=Mus musculus OX=10090 GN=Hmgn1 PE=1 SV=2 P18608 Non-histone chromosomal protein HMG-14 OS=Mus musculus OX=10090 GN=Hmgn1 PE=1 SV=2 0 3 3 0.4175 0 1 1 1 524.0152 1570.03104 1570.02952 0.97 0.00051 0/0 0 0 48084000 HCD 30 MS2 17.03874 1521.4 37.925 71.8118 21799 21799 21796 QEplus033719.raw F4 1467 1801.5 1564.9 1184.9 1822.8 1287.5 91 2.85 1 FALSE 0.002749 0.05414 0.13 -250 107329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDVGEAEPR [K].iDVGEAEPR.[T] N-Term(TMT6plex) 2 Q91WQ3 "Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3" Q91WQ3; A2A7S7 "Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3; Tyrosine--tRNA ligase OS=Mus musculus OX=10090 GN=Yars PE=1 SV=1" 0 2 2 0.3603 0 1 1 1 607.83313 1214.65898 1214.65783 0.95 0.00058 0/0 0 0 18165480 HCD 30 MS2 22.14303 1143.5 110 71.8165 21801 21801 21796 QEplus033719.raw F4 1218.6 852.3 1171.9 780.2 1381.3 1456.5 216 2.97 1 FALSE 0.0002814 0.005574 0.488 -250 107336 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAEVGAGGSK [K].iAEVGAGGSk.[S] N-Term(TMT6plex); K10(TMT6plex) 1 O35295 Transcriptional activator protein Pur-beta OS=Mus musculus OX=10090 GN=Purb PE=1 SV=3 O35295 Transcriptional activator protein Pur-beta OS=Mus musculus OX=10090 GN=Purb PE=1 SV=3 0 3 3 0.6235 0 1 1 1 449.60757 1346.80817 1346.80439 2.81 0.00126 0/0 0 0 18073348 HCD 30 MS2 48.38179 720.1 39.128 71.8188 21802 21802 21796 QEplus033719.raw F4 823.8 490.4 741.1 440.8 959.5 864.8 464 3.32 1 FALSE 1.14E-05 2.17E-05 0.983 -250 107343 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGKLDKDEIR [K].dGkLDkDEIR.[H] N-Term(TMT6plex); K3(TMT6plex); K6(TMT6plex) 1 Q05186 Reticulocalbin-1 OS=Mus musculus OX=10090 GN=Rcn1 PE=1 SV=1 Q05186 Reticulocalbin-1 OS=Mus musculus OX=10090 GN=Rcn1 PE=1 SV=1 2 3 3 0.4296 0 1 1 1 626.04193 1876.11124 1876.11069 0.29 0.00018 0/0 0 0 15845745 HCD 30 MS2 31.65068 1285 107.5 71.8213 21803 21803 21796 QEplus033719.raw F4 1283 1137.5 1369.3 1000.5 1678.9 1241 430 2.84 1 FALSE 0.0009075 0.01249 0.366 -250 107349 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQLEEEEEAK [R].eQLEEEEEAk.[R] N-Term(TMT6plex); K10(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 2 2 0.6974 0 1 1 1 846.44189 1691.87651 1691.87398 1.5 0.00127 0/0 0 0 16525763 HCD 30 MS2 0 756.8 110 71.8238 21804 21804 21796 QEplus033719.raw F4 784.4 696.5 877.7 505.1 939.1 737.9 266 4.23 1 FALSE 1.14E-05 8.75E-08 1.438 -250 107370 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDILPK [K].rDILPk.[N] N-Term(TMT6plex); K6(TMT6plex) 10 Q8C9L6; A2API8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1;Paralemmin A kinase anchor protein OS=Mus musculus OX=10090 GN=Pakap PE=1 SV=1 Q69ZV5; O54931-3; O54931-4; Q8C9L6; A2API8; O54931-2; Q99L95; O54931-5; O54931; F7AA26 MKIAA0920 protein (Fragment) OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1; Isoform 3 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; Isoform 4 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1; Paralemmin A kinase anchor protein OS=Mus musculus OX=10090 GN=Pakap PE=1 SV=1; Isoform 2 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; Akap2 protein OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1; Isoform 5 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2 PE=1 SV=3; Paralemmin A kinase anchor protein (Fragment) OS=Mus musculus OX=10090 GN=Pakap PE=1 SV=1 1 3 3 0.2403 0 1 1 1 400.60104 1199.78858 1199.78761 0.8 0.00032 0/0 0 0 15219002 HCD 30 MS2 17.7758 747.5 110 71.8361 21808 21808 21807 QEplus033719.raw F4 794.2 616.9 764.6 428.2 1087.4 793.4 100 2.33 2 FALSE 0.0002814 0.005618 0.487 -250 107379 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQEPIPQNIDR [R].dQEPIPQNIDR.[V] N-Term(TMT6plex) 16 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 Q9QXZ0-3; B1ARU4; E9QA63; Q80TZ5; E9QNP1; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; F6YKN8; Q80ZZ3; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8 Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; MKIAA0465 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Macf1 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 2 2 0.6582 0 1 1 1 777.41132 1553.81536 1553.8121 2.09 0.00163 0/0 0 0 5824470.5 HCD 30 MS2 0 305.7 110 71.8386 21809 21809 21807 QEplus033719.raw F4 323.8 176.9 377.1 293.3 212.6 450.7 305 3.92 3 FALSE 1.14E-05 3.69E-10 1.889 -250 107386 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LIQEGK [KR].lIQEGk.[ALCW] N-Term(TMT6plex); K6(TMT6plex) 4 B9EIU1; Q9CQC7 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1;NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 OS=Mus musculus OX=10090 GN=Ndufb4 PE=1 SV=3 B9EIU1; Q9CQC7; Q8CGC7; Q4VAE8 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 OS=Mus musculus OX=10090 GN=Ndufb4 PE=1 SV=3; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4; Complex I-B15 (Fragment) OS=Mus musculus OX=10090 GN=Ndufb4 PE=2 SV=1 0 2 2 0.0558 0 1 1 1 573.36908 1145.73088 1145.72943 1.27 0.00073 0/0 0 0 36802496 HCD 30 MS2 20.02301 1445.7 59.861 71.8409 21810 21810 21807 QEplus033719.raw F4 1593.9 1118.4 1424 1400.3 1590.4 1547.3 449 2.33 2 FALSE 0.002309 0.04583 0.155 -250 107387 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLQEGK [KR].lLQEGk.[ALCW] N-Term(TMT6plex); K6(TMT6plex) 2 A0A1D5RMB0; Q3UQ40 Alcohol dehydrogenase 6B (class V) OS=Mus musculus OX=10090 GN=Adh6b PE=3 SV=1; Alcohol dehydrogenase 6B (class V) (Fragment) OS=Mus musculus OX=10090 GN=Adh6b PE=2 SV=1 0 2 2 0.0558 0 1 2 2 573.36908 1145.73088 1145.72943 1.27 0.00073 0/0 0 0 36802496 HCD 30 MS2 20.02301 1445.7 59.861 71.8409 21810 21810 21807 QEplus033719.raw F4 1593.9 1118.4 1424 1400.3 1590.4 1547.3 449 2.33 2 FALSE 0.002309 0.04583 0.155 -250 107399 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAQSPQVK [K].lAQSPQVk.[Q] N-Term(TMT6plex); K8(TMT6plex) 6 Q64737 Trifunctional purine biosynthetic protein adenosine-3 OS=Mus musculus OX=10090 GN=Gart PE=1 SV=3 Q64737; Q3TH49; Q3UJP8; A0A338P6X4; D6RCG1; A0A338P676 Trifunctional purine biosynthetic protein adenosine-3 OS=Mus musculus OX=10090 GN=Gart PE=1 SV=3; Glycinamide ribonucleotide synthetase OS=Mus musculus OX=10090 GN=Gart PE=2 SV=1; Trifunctional purine biosynthetic protein adenosine-3 OS=Mus musculus OX=10090 GN=Gart PE=2 SV=1; Trifunctional purine biosynthetic protein adenosine-3 (Fragment) OS=Mus musculus OX=10090 GN=Gart PE=1 SV=1; Trifunctional purine biosynthetic protein adenosine-3 OS=Mus musculus OX=10090 GN=Gart PE=1 SV=1; Trifunctional purine biosynthetic protein adenosine-3 (Fragment) OS=Mus musculus OX=10090 GN=Gart PE=1 SV=1 0 2 2 0.5662 0 1 1 1 664.91901 1328.83074 1328.83021 0.4 0.00026 0/0 0 0 19567070 HCD 30 MS2 20.39932 1111.5 110 71.8457 21812 21812 21807 QEplus033719.raw F4 1076.5 1068.3 1239.9 814.4 1267.2 1202.7 229 3.02 1 FALSE 1.14E-05 0.0003196 0.76 -250 107408 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLQSSLK [K].kLQSSLk.[K] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 2 A2A7Z4 Transcription factor BTF3 OS=Mus musculus OX=10090 GN=Btf3l4 PE=1 SV=1 A2A7Z4; Q78IG7 Transcription factor BTF3 OS=Mus musculus OX=10090 GN=Btf3l4 PE=1 SV=1; Transcription factor BTF3 (Fragment) OS=Mus musculus OX=10090 GN=Btf3l4 PE=2 SV=1 1 3 3 0.2447 0 1 1 1 497.66803 1490.98954 1490.98733 1.48 0.00074 0/0 0 0 15651793 HCD 30 MS2 50.29012 1469.4 110 71.8482 21813 21813 21807 QEplus033719.raw F4 1672.1 1199.6 1540.1 1407.1 1570.8 1426.9 114 2.37 1 FALSE 6.52E-05 0.002688 0.569 -250 107428 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIEMTQEDVR [R].nIEMTQEDVR.[L] N-Term(TMT6plex) 2 Q6P4T2 U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Mus musculus OX=10090 GN=Snrnp200 PE=1 SV=1 Q8BYH6; Q6P4T2 Helicase ATP-binding domain-containing protein OS=Mus musculus OX=10090 GN=Snrnp200 PE=2 SV=1; U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Mus musculus OX=10090 GN=Snrnp200 PE=1 SV=1 0 2 2 0.6304 0 1 1 1 732.37378 1463.74028 1463.73616 2.82 0.00206 0/0 0 0 10138647 HCD 30 MS2 40.64819 550 110 71.8532 21815 21815 21807 QEplus033719.raw F4 544.6 526.9 610.3 399.8 656 562.7 198 3.68 1 FALSE 1.14E-05 3.82E-08 1.507 -250 107444 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVNPEDDFQR [K].gVNPEDDFQR.[E] N-Term(TMT6plex) 2 A2ACZ1 Probable rRNA-processing protein EBP2 (Fragment) OS=Mus musculus OX=10090 GN=Ebna1bp2 PE=1 SV=8 A2ACZ1; Q9D903 Probable rRNA-processing protein EBP2 (Fragment) OS=Mus musculus OX=10090 GN=Ebna1bp2 PE=1 SV=8; Probable rRNA-processing protein EBP2 OS=Mus musculus OX=10090 GN=Ebna1bp2 PE=2 SV=1 0 2 2 0.7656 0 1 1 1 703.34991 1405.69255 1405.69092 1.16 0.00081 0/0 0 0 6288487 HCD 30 MS2 52.44777 646.5 110 71.8582 21817 21817 21807 QEplus033719.raw F4 673.9 525.6 718.8 536.4 697.4 726.6 125 3.2 1 FALSE 3.35E-05 0.001137 0.651 -250 107450 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIDCAQVYQNEK [R].hIDcAQVYQNEk.[E] N-Term(TMT6plex); C4(Carbamidomethyl); K12(TMT6plex) 5 Q3UDY1 Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1 Q3TCL2; D3YVJ7; Q3ULP0; Q3UDY1; Q5U415 "Aldo_ket_red domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1; Aldo-keto reductase family 1, member B3 (aldose reductase) (Fragment) OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1; Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1; Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1; Aldo-keto reductase family 1, member B3 (Aldose reductase) OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1" 0 2 2 0.7961 0 1 1 1 982.00903 1963.01079 1963.01077 0.01 0.00001 0/0 0 0 6397383.5 HCD 30 MS2 0 313.6 110 71.8655 21819 21819 21818 QEplus033719.raw F4 306.9 197.6 373 400.6 196.7 406.6 304 5.1 1 FALSE 1.14E-05 3.14E-12 2.282 -250 107458 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERLYPLRK [K].eRLYPLRk.[Y] N-Term(TMT6plex); K8(TMT6plex) 1 Q6ZWV7 60S ribosomal protein L35 OS=Mus musculus OX=10090 GN=Rpl35 PE=1 SV=1 Q6ZWV7 60S ribosomal protein L35 OS=Mus musculus OX=10090 GN=Rpl35 PE=1 SV=1 2 4 4 0.3745 0 1 1 1 383.99738 1532.96767 1532.9677 -0.02 -0.00001 0/0 0 0 60429064 HCD 30 MS2 4.778772 363.7 20.668 71.8678 21820 21820 21818 QEplus033719.raw F4 314.4 309.5 491.6 285.7 352.6 428.3 347 2.43 1 FALSE 0.002535 0.04993 0.142 -250 107465 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAEVGAGGSK [K].iAEVGAGGSk.[S] N-Term(TMT6plex); K10(TMT6plex) 1 O35295 Transcriptional activator protein Pur-beta OS=Mus musculus OX=10090 GN=Purb PE=1 SV=3 O35295 Transcriptional activator protein Pur-beta OS=Mus musculus OX=10090 GN=Purb PE=1 SV=3 0 2 2 0.5402 0 1 1 1 673.90613 1346.80498 1346.80439 0.44 0.0003 0/0 0 0 51446180 HCD 30 MS2 16.59441 935.7 41.487 71.8701 21821 21821 21818 QEplus033719.raw F4 975.3 693 1171.9 898.2 731.5 1144.1 555 3.48 1 FALSE 1.14E-05 3.41E-08 1.516 -250 107484 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVGDWRK [R].dVGDWRk.[N] N-Term(TMT6plex); K7(TMT6plex) 3 P13412 "Troponin I, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnni2 PE=2 SV=2" A0A1B0GRY8; P13412; A2A6J8 "Troponin I, fast skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni2 PE=1 SV=1; Troponin I, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnni2 PE=2 SV=2; Troponin I, fast skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni2 PE=1 SV=1" 1 3 3 0.3 0 1 1 1 445.25998 1333.76538 1333.76286 1.9 0.00084 0/0 0 0 42093788 HCD 30 MS2 54.34284 1211 23.384 71.8746 21823 21823 21818 QEplus033719.raw F4 1508 547.9 1273.4 1548.3 689.6 1698.7 457 2.2 1 FALSE 0.002662 0.05285 0.134 -250 107492 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQLEEEEEAK [R].eQLEEEEEAk.[R] N-Term(TMT6plex); K10(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 3 3 0.6667 0 1 1 1 564.62976 1691.87473 1691.87398 0.44 0.00025 0/0 0 0 37927136 HCD 30 MS2 17.89725 729.8 53.361 71.8768 21824 21824 21818 QEplus033719.raw F4 773.6 623.7 843.8 511.7 867.9 758.1 263 3.93 1 FALSE 1.14E-05 1.14E-06 1.227 -250 107518 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLDELK [K].rLDELk.[R] N-Term(TMT6plex); K6(TMT6plex) 1 Q06185 "ATP synthase subunit e, mitochondrial OS=Mus musculus OX=10090 GN=Atp5me PE=1 SV=2" Q06185 "ATP synthase subunit e, mitochondrial OS=Mus musculus OX=10090 GN=Atp5me PE=1 SV=2" 1 3 3 0.0989 0 1 1 1 411.26428 1231.77829 1231.77744 0.69 0.00028 0/0 0 0 21355214 HCD 30 MS2 33.8574 672 48.273 71.8836 21827 21827 21818 QEplus033719.raw F4 687.6 491.6 745.9 668.1 560.2 878.6 441 2.63 1 FALSE 0.0002019 0.004049 0.526 -250 107543 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADGSTQVIDTK [K].aDGSTQVIDTk.[N] N-Term(TMT6plex); K11(TMT6plex) 2 O08749 "Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Dld PE=1 SV=2" O08749; Q3TIE8 "Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Dld PE=1 SV=2; Dihydrolipoyl dehydrogenase OS=Mus musculus OX=10090 GN=Dld PE=2 SV=1" 0 2 2 0.7192 0 1 1 1 796.94952 1592.89177 1592.88957 1.38 0.0011 0/0 0 0 14811505 HCD 30 MS2 0 723.8 110 71.8959 21831 21831 21829 QEplus033719.raw F4 767.3 561.7 810.4 792.8 544.9 865.8 390 3.81 1 FALSE 1.14E-05 1.18E-09 1.793 -250 107548 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DCFGCLR [R].dcFGcLR.[E] N-Term(TMT6plex); C2(Carbamidomethyl); C5(Carbamidomethyl) 1 O54962 Barrier-to-autointegration factor OS=Mus musculus OX=10090 GN=Banf1 PE=1 SV=1 O54962 Barrier-to-autointegration factor OS=Mus musculus OX=10090 GN=Banf1 PE=1 SV=1 0 2 2 0.7689 0 1 1 1 578.77606 1156.54485 1156.54407 0.68 0.00039 0/0 0 0 76747424 HCD 30 MS2 3.286804 794.1 21.098 71.8982 21832 21832 21829 QEplus033719.raw F4 748.4 781.3 959.7 601.3 807.1 867 36 2.51 1 FALSE 0.00504 0.08712 0.042 -250 107554 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGMSSLKG [R].aGMSSLkG.[-] N-Term(TMT6plex); K7(TMT6plex) 6 Q52KG9 "Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1" Q52KG9; Q3TI62; Q8VEI1; Q3TW97; Q3TI05; Q3TIX8 "Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Cct6a protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Chaperonin containing Tcp1, subunit 6a (Zeta) OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct6a PE=2 SV=1" 1 2 2 0.5647 0 1 1 1 604.85736 1208.70745 1208.70731 0.11 0.00007 0/0 0 0 60645864 HCD 30 MS2 9.135922 1159.8 24.572 71.9005 21833 21833 21829 QEplus033719.raw F4 1069.7 1078.8 1427.6 942.2 1156.6 1283.9 320 2.78 1 FALSE 0.0007533 0.01063 0.394 -250 107560 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAGLSYIR [R].qAGLSYIR.[F] N-Term(TMT6plex) 2 P56382 "ATP synthase subunit epsilon, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1e PE=1 SV=2" P56382; Q6VEU5 "ATP synthase subunit epsilon, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1e PE=1 SV=2; H+ transporting F1 ATP synthase epsilon subunit OS=Mus musculus OX=10090 GN=Atp5e PE=2 SV=1" 0 2 2 0.1765 0 1 1 1 568.8349 1136.66252 1136.66252 0 0 0/0 0 0 53598904 HCD 30 MS2 23.05186 868.3 19.798 71.9027 21834 21834 21829 QEplus033719.raw F4 856.8 609.4 959.6 1026.5 672.7 1084.7 231 2.72 1 FALSE 1.14E-05 0.0002616 0.777 -250 107570 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YHGNVTLLR [K].yHGNVTLLR.[A] N-Term(TMT6plex) 3 Q3UHT6 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1 Q3UHT6; P19096; A0A0U1RNJ1 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=1 0 3 3 0.6349 0 1 1 1 434.58923 1301.75315 1301.75274 0.32 0.00014 0/0 0 0 32434376 HCD 30 MS2 32.44142 423.6 29.621 71.905 21835 21835 21829 QEplus033719.raw F4 366 311.9 486.7 426.2 378.8 571.8 377 4.41 1 FALSE 1.14E-05 7.04E-06 1.076 -250 107586 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIQGLPR [R].dIQGLPR.[H] N-Term(TMT6plex) 2 Q8BH64 EH domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ehd2 PE=1 SV=1 Q8R2X0; Q8BH64 Ehd2 protein OS=Mus musculus OX=10090 GN=Ehd2 PE=2 SV=1; EH domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ehd2 PE=1 SV=1 0 2 2 0.2669 0 1 1 1 514.3092 1027.61113 1027.60976 1.33 0.00069 0/0 0 0 29530522 HCD 30 MS2 25.61636 1068.2 52.892 71.9118 21838 21838 21829 QEplus033719.raw F4 1032.9 1058.6 1169.7 714.2 1315.6 1118.2 102 2.51 1 FALSE 0.002869 0.05618 0.124 -250 107592 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TKPIWTR [K].tkPIWTR.[N] N-Term(TMT6plex); K2(TMT6plex) 9 P07901; Q71LX8 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4;Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q3TKB9; P07901; Q3TJU7; Q3TKA2; E9Q3D6; Q3UIF3; A0PJ91; Q71LX8; Q3TKG0 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-beta (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 0 2 2 0.3706 0 1 1 1 680.42981 1359.85234 1359.85128 0.78 0.00053 0/0 0 0 25594910 HCD 30 MS2 21.33301 1231.6 110 71.9143 21839 21839 21829 QEplus033719.raw F4 1189.3 1015.4 1483.7 915.7 1214.5 1571 332 1.97 2 FALSE 0.007001 0.1108 -0.022 -250 107604 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DCYPAVQK [K].dcYPAVQk.[T] N-Term(TMT6plex); C2(Carbamidomethyl); K8(TMT6plex) 4 Q3TFE8 Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1 Q3TFE8; Q7TSZ6; Q3UHW8; P70168 Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1; Karyopherin (Importin) beta 1 OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1; Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Kpnb1 PE=2 SV=1; Importin subunit beta-1 OS=Mus musculus OX=10090 GN=Kpnb1 PE=1 SV=2 0 2 2 0.6426 0 1 1 1 719.89258 1438.77788 1438.77646 0.99 0.00071 0/0 0 0 27532044 HCD 30 MS2 9.703878 781 66.233 71.9239 21842 21842 21840 QEplus033719.raw F4 776.8 768.8 838.4 615.8 946.9 739.3 291 3.05 1 FALSE 1.14E-05 0.0005429 0.715 -250 107610 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TKPIWTR [K].tkPIWTR.[N] N-Term(TMT6plex); K2(TMT6plex) 9 P07901; Q71LX8 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4;Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q3TKB9; P07901; Q3TJU7; Q3TKA2; E9Q3D6; Q3UIF3; A0PJ91; Q71LX8; Q3TKG0 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-beta (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 0 3 3 0.4022 0 1 1 1 453.95587 1359.85306 1359.85128 1.31 0.00059 0/0 0 0 419481760 HCD 30 MS2 8.818764 824.5 3.366 71.9261 21843 21843 21840 QEplus033719.raw F4 777.5 711 981.7 623.9 891.1 962 342 1.79 2 FALSE 0.008243 0.1412 -0.076 -250 107637 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYCYVSK [K].sYcYVSk.[E] N-Term(TMT6plex); C3(Carbamidomethyl); K7(TMT6plex) 2 P58044 Isopentenyl-diphosphate Delta-isomerase 1 OS=Mus musculus OX=10090 GN=Idi1 PE=1 SV=1 P58044; G3XA48 Isopentenyl-diphosphate Delta-isomerase 1 OS=Mus musculus OX=10090 GN=Idi1 PE=1 SV=1; Isopentenyl-diphosphate Delta-isomerase OS=Mus musculus OX=10090 GN=Idi1 PE=1 SV=1 0 2 2 0.6164 0 1 1 1 682.86804 1364.72881 1364.72844 0.27 0.00018 0/0 0 0 20562256 HCD 30 MS2 0 1548.7 110 71.9354 21847 21847 21840 QEplus033719.raw F4 1455.4 1344 1940 1505.1 1244.1 1803.8 307 3.18 1 FALSE 0.000565 0.008682 0.427 -250 107653 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADGSTQVIDTK [K].aDGSTQVIDTk.[N] N-Term(TMT6plex); K11(TMT6plex) 2 O08749 "Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Dld PE=1 SV=2" O08749; Q3TIE8 "Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Dld PE=1 SV=2; Dihydrolipoyl dehydrogenase OS=Mus musculus OX=10090 GN=Dld PE=2 SV=1" 0 3 3 0.6163 0 1 1 1 531.6355 1592.89194 1592.88957 1.49 0.00079 0/0 0 0 17912096 HCD 30 MS2 19.22646 1119.3 71.316 71.9399 21849 21849 21840 QEplus033719.raw F4 1246.6 855.7 1088 1073.2 1233.9 1218.3 390 3.31 1 FALSE 1.14E-05 0.0002958 0.767 -250 107670 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVAEEPPGLR [K].aVAEEPPGLR.[S] N-Term(TMT6plex) 3 Q6P542 ATP-binding cassette sub-family F member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=1 SV=1 Q6P542; Q5RL55; A1A4B8 "ATP-binding cassette sub-family F member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=1 SV=1; ATP-binding cassette, sub-family F (GCN20), member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=2 SV=1; Abcf1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abcf1 PE=2 SV=1" 0 2 2 0.6414 0 1 1 1 634.36493 1267.72258 1267.72077 1.43 0.00091 0/0 0 0 11246350 HCD 30 MS2 77.97774 1104.3 89.062 71.9497 21852 21852 21851 QEplus033719.raw F4 995 1004.4 1280.3 916 1170.9 1259 329 3.04 1 FALSE 1.14E-05 1.81E-06 1.189 -250 107685 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YNQILR [K].yNQILR.[I] N-Term(TMT6plex) 2 Q5FW97 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1 Q5FW97; Q6PHC1 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 0 2 2 0.1225 0 1 1 1 518.31219 1035.61711 1035.61485 2.19 0.00113 0/0 0 0 55794940 HCD 30 MS2 31.61259 862.9 20.517 71.9545 21854 21854 21851 QEplus033719.raw F4 832.3 692.1 952 820.5 956.7 923.9 141 2.04 1 FALSE 0.004707 0.08277 0.054 -250 107703 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FRADNLNK [R].fRADNLNk.[L] N-Term(TMT6plex); K8(TMT6plex) 7 Q8C483 Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1 A2AFS1; Q3U8N1; Q8C483; P26638; Q3U6F6; Q8CEH3; A2AFS0 "Seryl-aminoacyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Sars PE=1 SV=8; Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=2 SV=1; Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1; Serine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Sars1 PE=1 SV=3; Seryl-tRNA synthetase OS=Mus musculus OX=10090 GN=Sars PE=2 SV=1; Seryl_tRNA_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sars PE=2 SV=1; Seryl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Sars PE=1 SV=1" 1 3 3 0.5256 0 1 1 1 479.28586 1435.84302 1435.84217 0.59 0.00028 0/0 0 0 44038552 HCD 30 MS2 24.9117 865.2 35.931 71.959 21856 21856 21851 QEplus033719.raw F4 918.7 768.4 985.6 707.8 892.1 918.6 433 2.93 1 FALSE 0.0006126 0.009157 0.418 -250 107711 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SALGRPLDK [R].sALGRPLDk.[H] N-Term(TMT6plex); K9(TMT6plex) 5 Q80Y09 Pdcd6ip protein OS=Mus musculus OX=10090 GN=Pdcd6ip PE=2 SV=1 Q6ZPS9; Q9WU78-3; Q80Y09; Q9WU78; Q9WU78-2 MKIAA1375 protein (Fragment) OS=Mus musculus OX=10090 GN=Pdcd6ip PE=2 SV=1; Isoform 3 of Programmed cell death 6-interacting protein OS=Mus musculus OX=10090 GN=Pdcd6ip; Pdcd6ip protein OS=Mus musculus OX=10090 GN=Pdcd6ip PE=2 SV=1; Programmed cell death 6-interacting protein OS=Mus musculus OX=10090 GN=Pdcd6ip PE=1 SV=3; Isoform 2 of Programmed cell death 6-interacting protein OS=Mus musculus OX=10090 GN=Pdcd6ip 0 3 3 0.2166 0 1 1 1 472.29794 1414.87928 1414.87822 0.75 0.00035 0/0 0 0 28703284 HCD 30 MS2 28.67626 927.1 56.372 71.9613 21857 21857 21851 QEplus033719.raw F4 911.4 738.8 1063.4 738.8 1019.1 1090.8 310 2.17 1 FALSE 0.001946 0.03349 0.2 -250 107718 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALVDGCATK [R].aLVDGcATk.[K] N-Term(TMT6plex); C6(Carbamidomethyl); K9(TMT6plex) 4 B1AWB9; O88207-2 "Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1;Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1" A3KGE7; B1AWB9; O88207-2; A0A5F8MQ70 "Collagen alpha-1(V) chain (Fragment) OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1; Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1; Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1; Collagen alpha-1(V) chain (Fragment) OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1" 0 2 2 0.6076 0 1 1 1 696.90057 1392.79387 1392.79211 1.27 0.00088 0/0 0 0 17504784 HCD 30 MS2 35.50106 1013.9 110 71.9638 21858 21858 21851 QEplus033719.raw F4 1040.7 837.2 1126.4 859.1 1206.5 1013.8 452 3.67 2 FALSE 1.14E-05 1.02E-06 1.236 -250 107735 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FESPEVAER [K].fESPEVAER.[A] N-Term(TMT6plex) 7 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; Q9D0E1-2; Q3TQ66; Q570Z0; Q3UCL9; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 2 2 0.5749 0 1 1 1 646.83789 1292.6685 1292.6684 0.08 0.00005 0/0 0 0 11993224 HCD 30 MS2 43.51999 1063.8 110 71.9686 21860 21860 21851 QEplus033719.raw F4 1074.2 965.3 1186.1 909.9 1079.6 1167.9 209 2.87 1 FALSE 0.0003996 0.007259 0.453 -250 107753 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTVGVEPAADGK [R].kTVGVEPAADGk.[G] N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex) 2 Q5M9N5 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1 Q5M9N5; Q5M9J8 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=2 SV=1; 60S ribosomal protein L28 OS=Mus musculus OX=10090 GN=Rpl28 PE=1 SV=1 1 3 3 0.6755 0 1 1 1 620.37866 1859.12143 1859.12052 0.49 0.0003 0/0 0 0 12072526 HCD 30 MS2 29.21369 1082.5 110 71.9809 21864 21864 21862 QEplus033719.raw F4 1039.8 1288.9 1222.2 902.1 1121.2 920.9 352 4.93 1 FALSE 1.14E-05 2.26E-12 2.31 -250 107771 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVCDVVSR [K].mVcDVVSR.[M] N-Term(TMT6plex); C3(Carbamidomethyl) 4 P18872-2 Isoform Alpha-2 of Guanine nucleotide-binding protein G(o) subunit alpha OS=Mus musculus OX=10090 GN=Gnao1 D3Z2M7; P18872-2; P18872; F7BLT7 Guanine nucleotide-binding protein G(o) subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Gnao1 PE=1 SV=1; Isoform Alpha-2 of Guanine nucleotide-binding protein G(o) subunit alpha OS=Mus musculus OX=10090 GN=Gnao1; Guanine nucleotide-binding protein G(o) subunit alpha OS=Mus musculus OX=10090 GN=Gnao1 PE=1 SV=3; Guanine nucleotide-binding protein G(o) subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Gnao1 PE=1 SV=1 0 2 2 0.4257 0 1 1 1 597.8136 1194.61992 1194.61723 2.25 0.00135 0/0 0 0 13846611 HCD 30 MS2 50.70498 1165.6 52.415 71.9855 21866 21866 21862 QEplus033719.raw F4 1114.6 905.3 1251.6 985.8 1386.7 1349.5 202 1.48 1 FALSE 0.001787 0.0309 0.212 -250 107780 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVLAGR [KR].iVLAGR.[ME] N-Term(TMT6plex) 5 Q3U645 Uncharacterized protein OS=Mus musculus OX=10090 GN=Abcd3 PE=2 SV=1 Q3U645; Q3UNS0; Q9DBZ6; Q91VT3; P55096 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Abcd3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abcd3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abcd3 PE=2 SV=1; ATP-binding cassette, sub-family D (ALD), member 3 OS=Mus musculus OX=10090 GN=Abcd3 PE=2 SV=1; ATP-binding cassette sub-family D member 3 OS=Mus musculus OX=10090 GN=Abcd3 PE=1 SV=2" 0 2 2 0.1111 0 1 1 1 429.29254 857.57781 857.577 0.94 0.0004 0/0 0 0 12968856 HCD 30 MS2 27.63524 867.2 110 71.9905 21868 21868 21862 QEplus033719.raw F4 1054.1 619.3 858 665.9 972.6 1033.2 30 1.98 1 FALSE 0.003962 0.07385 0.078 -250 107781 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVLAGR [KR].lVLAGR.[ME] N-Term(TMT6plex) 3 P69566 Ran-binding protein 9 OS=Mus musculus OX=10090 GN=Ranbp9 PE=1 SV=1 P69566-2; P69566; E9Q5D6 Isoform 2 of Ran-binding protein 9 OS=Mus musculus OX=10090 GN=Ranbp9; Ran-binding protein 9 OS=Mus musculus OX=10090 GN=Ranbp9 PE=1 SV=1; Ran-binding protein 9 OS=Mus musculus OX=10090 GN=Ranbp9 PE=1 SV=1 0 2 2 0.1111 0 1 2 2 429.29254 857.57781 857.577 0.94 0.0004 0/0 0 0 12968856 HCD 30 MS2 27.63524 867.2 110 71.9905 21868 21868 21862 QEplus033719.raw F4 1054.1 619.3 858 665.9 972.6 1033.2 30 1.98 1 FALSE 0.003962 0.07385 0.078 -250 107791 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSSSTNLESMDTS [K].dSSSTNLESMDTS.[-] N-Term(TMT6plex) 1 Q6ZQ38 Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2 Q6ZQ38 Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2 0 2 2 0.9308 0 1 1 1 801.85522 1602.70317 1602.70023 1.84 0.00147 0/0 0 0 7768775 HCD 30 MS2 13.70088 321.2 110 71.9955 21870 21870 21862 QEplus033719.raw F4 312.1 342.7 347.4 200.8 432.1 292.1 20 3.47 1 FALSE 1.14E-05 0.0003242 0.759 -250 107794 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQQLVGPAMAR [R].qQQLVGPAMAR.[R] N-Term(TMT6plex) 4 Q99K41 EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1 Q3UUU0; Q99K41; Q3U254; Q3USG5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; C1q domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1 0 2 2 0.375 0 1 1 1 714.40338 1427.79949 1427.79903 0.32 0.00023 0/0 0 0 7373009.5 HCD 30 MS2 14.094 323.6 110 71.998 21871 21871 21862 QEplus033719.raw F4 302.3 303.6 368.2 291 327.1 349.4 327 3.44 1 FALSE 1.14E-05 8.86E-07 1.247 -250 107801 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGDSIGETPTPGASK [R].gGDSIGETPTPGASk.[R] N-Term(TMT6plex); K15(TMT6plex) 5 G5E866 Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1 Q3US00; G5E866; Q3UIB4; A0JLN0; Q99NB9 SF3b1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sf3b1 PE=2 SV=1; Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1; SF3b1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sf3b1 PE=2 SV=1; Sf3b1 protein (Fragment) OS=Mus musculus OX=10090 GN=Sf3b1 PE=2 SV=1; Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1 0 3 3 0.7007 0 1 1 1 611.33362 1831.9863 1831.98018 3.34 0.00204 0/0 0 0 7372665.5 HCD 30 MS2 0 618.6 110 72.0006 21872 21872 21862 QEplus033719.raw F4 627.1 582.4 670.4 485.8 713.2 632.8 383 4.31 1 FALSE 1.14E-05 2.12E-08 1.555 -250 107806 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADVDAATLAR [R].aDVDAATLAR.[I] N-Term(TMT6plex) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 0 2 2 0.6427 0 1 1 1 616.34631 1231.68535 1231.68438 0.79 0.00048 0/0 0 0 44596248 HCD 30 MS2 25.4164 806.6 38.576 72.0079 21874 21874 21873 QEplus033719.raw F4 860.6 417.8 806.7 1058.3 538.2 1158.1 391 3.61 1 FALSE 1.14E-05 1.11E-07 1.419 -250 107814 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEFGPPGPGPGSR [R].aEFGPPGPGPGSR.[G] N-Term(TMT6plex) 3 E9PYF1 Aminopeptidase B OS=Mus musculus OX=10090 GN=Rnpep PE=1 SV=1 Q8BMH2; E9PYF1; Q8VCT3 Leuk-A4-hydro_C domain-containing protein OS=Mus musculus OX=10090 GN=Rnpep PE=2 SV=1; Aminopeptidase B OS=Mus musculus OX=10090 GN=Rnpep PE=1 SV=1; Aminopeptidase B OS=Mus musculus OX=10090 GN=Rnpep PE=1 SV=2 0 2 2 0.5562 0 1 1 1 727.88373 1454.76018 1454.75894 0.85 0.00062 0/0 0 0 2607111.25 HCD 30 MS2 74.32398 343 110 72.0104 21875 21875 21873 QEplus033719.raw F4 345 304.4 371.5 299.2 364.7 373.1 225 3.29 1 FALSE 1.14E-05 2.65E-09 1.727 -250 107833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TMAQTAIK [R].tMAQTAIk.[A] N-Term(TMT6plex); K8(TMT6plex) 5 P28659 CUGBP Elav-like family member 1 OS=Mus musculus OX=10090 GN=Celf1 PE=1 SV=2 P28659-2; P28659; P28659-3; P28659-4; A0A0R4J0T5 Isoform 2 of CUGBP Elav-like family member 1 OS=Mus musculus OX=10090 GN=Celf1; CUGBP Elav-like family member 1 OS=Mus musculus OX=10090 GN=Celf1 PE=1 SV=2; Isoform 3 of CUGBP Elav-like family member 1 OS=Mus musculus OX=10090 GN=Celf1; Isoform 4 of CUGBP Elav-like family member 1 OS=Mus musculus OX=10090 GN=Celf1; CUGBP Elav-like family member 1 OS=Mus musculus OX=10090 GN=Celf1 PE=1 SV=1 0 2 2 0.5219 0 1 1 1 661.40021 1321.79314 1321.79138 1.33 0.00088 0/0 0 0 33392822 HCD 30 MS2 54.73632 966.9 41.877 72.0149 21877 21877 21873 QEplus033719.raw F4 921.6 864.5 1063.2 783.6 1065.5 1103 336 2.97 1 FALSE 5.44E-05 0.001782 0.609 -250 107845 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQMIEK [K].aQMIEk.[R] N-Term(TMT6plex); K6(TMT6plex) 9 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; B2RXX6; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.2008 0 1 1 1 589.35541 1177.70354 1177.7015 1.73 0.00102 0/0 0 0 25492252 HCD 30 MS2 30.65804 1571.1 59.089 72.0217 21880 21880 21873 QEplus033719.raw F4 1396.9 1321.8 1893 1413.1 1497.7 1903.8 427 2.49 2 FALSE 0.003809 0.07202 0.082 -250 107855 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCEAGYSPSYKEDK [K].scEAGYSPSYkEDk.[H] N-Term(TMT6plex); C2(Carbamidomethyl); K11(TMT6plex); K14(TMT6plex) 4 P10605 Cathepsin B OS=Mus musculus OX=10090 GN=Ctsb PE=1 SV=2 P10605; Q6LAF6; Q3TC17; Q3TVS6 Cathepsin B OS=Mus musculus OX=10090 GN=Ctsb PE=1 SV=2; Cathepsin B (Fragment) OS=Mus musculus OX=10090 GN=Ctsb PE=2 SV=1; Cathepsin B OS=Mus musculus OX=10090 GN=Ctsb PE=2 SV=1; Cathepsin B OS=Mus musculus OX=10090 GN=Ctsb PE=2 SV=1 1 3 3 0.7686 0 1 1 1 770.06354 2308.17606 2308.17342 1.14 0.00088 0/0 0 0 18425594 HCD 30 MS2 0 1085.3 110 72.0242 21881 21881 21873 QEplus033719.raw F4 1092.1 1170.8 1280.6 932.6 1137.7 898.2 331 4.97 1 FALSE 1.14E-05 6.31E-16 3.115 -250 107862 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEDELLAK [R].hEDELLAk.[E] N-Term(TMT6plex); K8(TMT6plex) 3 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 A2VCK0; Q8VDD5; A0A2R8VKI5 Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-9 (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=1 0 3 3 0.5014 0 1 1 1 471.61029 1412.81632 1412.81495 0.97 0.00046 0/0 0 0 22160070 HCD 30 MS2 15.84564 1175.2 101.742 72.0266 21882 21882 21873 QEplus033719.raw F4 1236.2 1082.3 1272.4 871.5 1327.1 1261.7 315 3.49 1 FALSE 1.14E-05 1.36E-05 1.022 -250 107915 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVLAESYER [K].aVLAESYER.[I] N-Term(TMT6plex) 2 Q8VDC3 Citrate hydro-lyase OS=Mus musculus OX=10090 GN=aco1 PE=3 SV=1 Q8VDC3; P28271 Citrate hydro-lyase OS=Mus musculus OX=10090 GN=aco1 PE=3 SV=1; Cytoplasmic aconitate hydratase OS=Mus musculus OX=10090 GN=Aco1 PE=1 SV=3 0 2 2 0.569 0 1 1 1 633.84839 1266.6895 1266.68913 0.29 0.00018 0/0 0 0 15130149 HCD 30 MS2 13.73259 1015.5 110 72.048 21890 21890 21884 QEplus033719.raw F4 934.6 941 1189.8 864.5 1039.6 1123.3 284 3.48 1 FALSE 1.14E-05 1.07E-06 1.231 -250 107938 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVMVDDSK [K].tVMVDDSk.[T] N-Term(TMT6plex); K8(TMT6plex) 6 A0A1L1SQ51 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1 Q71LX4; Q3TKJ2; A0A1L1SQ51; B2RY15; A0A1L1SVA8; E9PUM4 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=3; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1 0 2 2 0.3205 0 1 1 1 676.87921 1352.75115 1352.74957 1.16 0.00079 0/0 0 0 11521120 HCD 30 MS2 40.53281 886.8 110 72.0554 21893 21893 21884 QEplus033719.raw F4 998.5 533.1 786.4 1095.6 832.2 1075 327 3.12 1 FALSE 1.14E-05 0.0002236 0.79 -250 107945 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALQVMER [R].aLQVMER.[V] N-Term(TMT6plex) 3 Q8BK72 "28S ribosomal protein S27, mitochondrial OS=Mus musculus OX=10090 GN=Mrps27 PE=1 SV=2" Q8BK72; Q80ZI4; Q6A096 "28S ribosomal protein S27, mitochondrial OS=Mus musculus OX=10090 GN=Mrps27 PE=1 SV=2; Mrps27 protein OS=Mus musculus OX=10090 GN=Mrps27 PE=2 SV=1; MKIAA0264 protein (Fragment) OS=Mus musculus OX=10090 GN=Mrps27 PE=2 SV=1" 0 2 2 0.1917 0 1 1 1 538.31085 1075.61443 1075.61313 1.21 0.00065 0/0 0 0 7247567 HCD 30 MS2 39.97624 1333.3 110 72.0579 21894 21894 21884 QEplus033719.raw F4 1332.1 1129.4 1441.3 1107.1 1450.3 1539.5 325 1.93 1 FALSE 0.002973 0.05782 0.12 -250 107968 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGGVASGFK [K].kGGVASGFk.[H] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 9 A0A0J9YUQ8; P13020-2; Q3SX14 Actin-depolymerizing factor (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1;Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn;TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin A0A0J9YUJ8; A6PWS5; Q3UCW8; Q3U9Q8; A0A0J9YUQ8; P13020-2; Q3TGJ9; P13020; Q3SX14 Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1; Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Actin-depolymerizing factor (Fragment) OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=1; Isoform 2 of Gelsolin OS=Mus musculus OX=10090 GN=Gsn; Actin-depolymerizing factor OS=Mus musculus OX=10090 GN=Gsn PE=2 SV=1; Gelsolin OS=Mus musculus OX=10090 GN=Gsn PE=1 SV=3; TREMBL:Q3SX14 (Bos taurus) Similar to Gelsolin 1 3 3 0.5777 0 1 1 1 513.32751 1537.96799 1537.96692 0.69 0.00036 0/0 0 0 43030820 HCD 30 MS2 25.35315 1211.5 41.643 72.07 21898 21898 21895 QEplus033719.raw F4 1228 1054.3 1308.9 1036.4 1417.7 1223.4 228 3.41 3 TRUE 1.14E-05 2.00E-06 1.18 -250 107978 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGKPHTVPCK [K].iGkPHTVPck.[V] N-Term(TMT6plex); K3(TMT6plex); C9(Carbamidomethyl); K10(TMT6plex) 10 Q3TXS9 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1 Q3TXS9; D3YVC1; Q3TLE5; Q3TI78; Q3TXR5; O89072; P25444; Q3TL20; D3YWJ3; Q3UB36 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 (Fragment) OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 (Fragment) OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=3; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1 0 3 3 0.5589 0 1 1 1 608.70984 1824.11496 1824.11327 0.93 0.00056 0/0 0 0 33632848 HCD 30 MS2 25.38665 982.4 40.625 72.0723 21899 21899 21895 QEplus033719.raw F4 1006.7 799.3 1160.7 791.7 1021.2 1114.9 261 3.99 1 FALSE 5.44E-05 0.001969 0.6 -250 107988 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVEGALK [R].tVEGALk.[E] N-Term(TMT6plex); K7(TMT6plex) 13 Q8CAQ8; A0A0U1RP81 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1;MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q3U7N2; Q8CAQ8; E9QAY6; Q8CAQ8-2; Q3TZK4; A0A0U1RP81; Q3TVZ5; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5; A0A1B0GX08 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 0 2 2 0.0636 0 1 1 1 588.37451 1175.74175 1175.73999 1.49 0.00088 0/0 0 0 33921128 HCD 30 MS2 28.85062 1364.9 44.135 72.0746 21900 21900 21895 QEplus033719.raw F4 1441 1119.1 1488.7 1313.2 1309.4 1517.8 435 2.2 2 FALSE 0.0005944 0.00877 0.425 -250 107998 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NALAAATPK [K].nALAAATPk.[E] N-Term(TMT6plex); K9(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 2 2 0.7209 0 1 1 1 657.91132 1314.81536 1314.81456 0.61 0.0004 0/0 0 0 18506552 HCD 30 MS2 20.43047 972.3 110 72.0771 21901 21901 21895 QEplus033719.raw F4 1104.1 418.9 1024.3 1248.2 457.3 1581 253 3.44 1 FALSE 1.14E-05 1.35E-06 1.212 -250 108004 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FKDPNAPK [K].fkDPNAPk.[R] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 12 Q8BNM0 High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 Q8BQ02; Q8BNM0; Q6P202; Q58EV5; Q80YZ1; Q3UJK0; Q8C7C4; D3YZ18; Q3UBK2; A0A0J9YUZ4; A0A0J9YUD8; Q497Z6 High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=bM168F16.1 PE=3 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=8; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein B1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 1 4 4 0.2478 0 1 1 1 401.75009 1603.97854 1603.97749 0.65 0.00026 0/0 0 0 16479516 HCD 30 MS2 49.91498 668.3 60.208 72.0793 21902 21902 21895 QEplus033719.raw F4 577.1 686.4 797.1 425.4 860.8 663.2 377 2.3 1 FALSE 0.003177 0.06197 0.109 -250 108019 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YTTPEDATPEPGEDPR [R].yTTPEDATPEPGEDPR.[V] N-Term(TMT6plex) 8 P63094 Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Mus musculus OX=10090 GN=Gnas PE=1 SV=1 P63094; A0A571BEI3; A0A571BEM2; P63094-2; P63094-3; Q6R0H7; Q6R0H7-4; Z4YKV1 Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Mus musculus OX=10090 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Mus musculus OX=10090 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Mus musculus OX=10090 GN=Gnas PE=1 SV=1; Isoform Gnas-2 of Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Mus musculus OX=10090 GN=Gnas; Isoform Gnas-3 of Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Mus musculus OX=10090 GN=Gnas; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Mus musculus OX=10090 GN=Gnas PE=1 SV=1; Isoform XLas-4 of Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Mus musculus OX=10090 GN=Gnas; Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Mus musculus OX=10090 GN=Gnas PE=1 SV=1 0 3 3 0.8776 0 1 1 1 668.65186 2003.94101 2003.93955 0.73 0.00049 0/0 0 0 9150967 HCD 30 MS2 12.93123 453.6 110 72.0841 21904 21904 21895 QEplus033719.raw F4 414.6 410.3 540.8 383.9 470.3 502 82 3.84 1 FALSE 1.14E-05 6.27E-06 1.086 -250 108032 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFQEEIAR [R].eFQEEIAR.[L] N-Term(TMT6plex) 5 Q571A6 Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif3c PE=2 SV=1 Q80U27; Q61771; Q571A6; O35066; Q3UZU0 Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif3b PE=2 SV=1; Kinesin-like protein KIF3B OS=Mus musculus OX=10090 GN=Kif3b PE=1 SV=1; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif3c PE=2 SV=1; Kinesin-like protein KIF3C OS=Mus musculus OX=10090 GN=Kif3c PE=1 SV=3; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif3c PE=2 SV=1 0 2 2 0.5265 0 1 1 1 625.83356 1250.65984 1250.65783 1.6 0.001 0/0 0 0 4198525.5 HCD 30 MS2 36.51394 709.2 110 72.0939 21907 21907 21906 QEplus033719.raw F4 746.3 627.4 737.8 542.2 938 663.4 227 2.45 1 FALSE 5.44E-05 0.002114 0.593 -250 108038 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTIFGK [K].hTIFGk.[V] N-Term(TMT6plex); K6(TMT6plex) 1 Q3TKY6 Spliceosome-associated protein CWC27 homolog OS=Mus musculus OX=10090 GN=Cwc27 PE=1 SV=1 Q3TKY6 Spliceosome-associated protein CWC27 homolog OS=Mus musculus OX=10090 GN=Cwc27 PE=1 SV=1 0 3 3 0.4603 0 1 1 1 387.5784 1160.72065 1160.7192 1.25 0.00048 0/0 0 0 4218579 HCD 30 MS2 26.71703 394.8 110 72.0964 21908 21908 21906 QEplus033719.raw F4 398.5 345.6 407.7 264.4 495.8 457 403 2.52 1 FALSE 0.002688 0.0534 0.132 -250 108046 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESNPLTAQQTTK [R].eSNPLTAQQTTk.[L] N-Term(TMT6plex); K12(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.655 0 1 1 1 592.66882 1775.99192 1775.99035 0.88 0.00052 0/0 0 0 16988430 HCD 30 MS2 19.83392 982.5 110 72.0989 21909 21909 21906 QEplus033719.raw F4 1010.7 783.6 1042.7 1020.2 889.7 1147.9 431 4.29 3 FALSE 1.14E-05 9.43E-09 1.622 -250 108061 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEDELLAK [R].hEDELLAk.[E] N-Term(TMT6plex); K8(TMT6plex) 3 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 A2VCK0; Q8VDD5; A0A2R8VKI5 Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-9 (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=1 0 2 2 0.4859 0 1 1 1 706.91113 1412.81499 1412.81495 0.03 0.00002 0/0 0 0 12219914 HCD 30 MS2 49.94477 882.1 110 72.1037 21911 21911 21906 QEplus033719.raw F4 913.6 797.6 1023.1 699.7 947.2 911.3 316 3.54 1 FALSE 1.14E-05 3.00E-05 0.957 -250 108067 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLRDIGAK [R].dLRDIGAk.[N] N-Term(TMT6plex); K8(TMT6plex) 9 B2RRI2 Protein strawberry notch homolog 1 OS=Mus musculus OX=10090 GN=Sbno1 PE=1 SV=1 B2RRI2; Q689Z5; A0A0G2JG63; A0A0G2JGC7; F7CVW0; A0A0G2JEM3; Q3TMM7; I6L981; Q689Z5-2 Protein strawberry notch homolog 1 OS=Mus musculus OX=10090 GN=Sbno1 PE=1 SV=1; Protein strawberry notch homolog 1 OS=Mus musculus OX=10090 GN=Sbno1 PE=1 SV=2; Protein strawberry notch homolog 1 (Fragment) OS=Mus musculus OX=10090 GN=Sbno1 PE=1 SV=1; Protein strawberry notch homolog 1 (Fragment) OS=Mus musculus OX=10090 GN=Sbno1 PE=1 SV=1; Protein strawberry notch homolog 1 (Fragment) OS=Mus musculus OX=10090 GN=Sbno1 PE=1 SV=1; Protein strawberry notch homolog 1 (Fragment) OS=Mus musculus OX=10090 GN=Sbno1 PE=1 SV=1; Protein strawberry notch homolog 1 (Fragment) OS=Mus musculus OX=10090 GN=Sbno1 PE=1 SV=1; Sbno1 protein OS=Mus musculus OX=10090 GN=Sbno1 PE=2 SV=1; Isoform 2 of Protein strawberry notch homolog 1 OS=Mus musculus OX=10090 GN=Sbno1 1 3 3 0 0 1 1 1 449.27875 1345.82169 1345.82037 0.98 0.00044 0/0 0 0 8715898 HCD 30 MS2 23.68959 740.8 110 72.1062 21912 21912 21906 QEplus033719.raw F4 744.8 639.6 811.3 526.4 940.6 782.3 621 2.71 1 FALSE 0.005773 0.09667 0.016 -250 108077 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQQLEEAAK [K].eQQLEEAAk.[E] N-Term(TMT6plex); K9(TMT6plex) 4 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 Q3TH77; E9Q7G0; A0A1B0GT61; A0A1B0GSW3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Numa1 PE=2 SV=1; Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1; Nuclear mitotic apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1; Nuclear mitotic apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 0 2 2 0.5769 0 1 1 1 752.42371 1503.84014 1503.84189 -1.17 -0.00088 0/0 0 0 3789715 HCD 30 MS2 17.97407 319.9 110 72.1113 21914 21914 21906 QEplus033719.raw F4 292.5 304.7 353.3 216.6 421.7 330.8 434 3.9 1 FALSE 1.14E-05 4.76E-07 1.299 -250 108081 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPITTGGVTYR [K].kPITTGGVTYR.[E] N-Term(TMT6plex); K1(TMT6plex) 1 Q543D7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fhl2 PE=1 SV=1 Q543D7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fhl2 PE=1 SV=1 0 3 3 0.5587 0 1 1 1 551.00311 1650.99479 1650.99431 0.29 0.00016 0/0 0 0 33387088 HCD 30 MS2 32.61183 989.6 48.605 72.1135 21915 21915 21906 QEplus033719.raw F4 966.7 950.2 1132.4 784.6 1151.2 952.8 360 3.49 1 FALSE 1.14E-05 6.08E-06 1.089 -250 108091 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KIVDQIRPDR [R].kIVDQIRPDR.[Q] N-Term(TMT6plex); K1(TMT6plex) 11 Q5U222; Q501J6 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1;Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1 Q3UXW3; Q5U222; Q3TU25; Q3V0Z8; Q501J6; Q3U741; A1L333; Q501J6-2; S4R1I6; Q61656; Q8BTS0 RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Isoform 2 of Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 1 4 4 0.3333 0 1 1 1 425.2662 1698.04299 1698.04266 0.19 0.00008 0/0 0 0 30112908 HCD 30 MS2 42.94279 716.5 38.396 72.1158 21916 21916 21906 QEplus033719.raw F4 693 680.4 871.2 596.4 709.2 748.9 218 1.68 2 FALSE 0.005545 0.09381 0.024 -250 108107 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARPTTDSFDDYPPR [R].aRPTTDSFDDYPPR.[R] N-Term(TMT6plex) 6 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 0 3 3 0.6497 0 1 1 1 622.97498 1866.91037 1866.91836 -4.28 -0.00266 0/0 0 0 9092250 HCD 30 MS2 31.88326 674.6 110 72.1256 21919 21919 21917 QEplus033719.raw F4 697.7 528.7 666.6 624.3 734.4 796.1 147 4.71 1 FALSE 1.14E-05 2.19E-06 1.173 -250 108114 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RALANSLACQGK [K].rALANSLAcQGk.[Y] N-Term(TMT6plex); C9(Carbamidomethyl); K12(TMT6plex) 5 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 Q9CPQ9; A6ZI46; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 1 3 3 0.6981 0 1 1 1 583.00696 1747.00632 1747.00489 0.82 0.00048 0/0 0 0 132688800 HCD 30 MS2 10.58431 755.4 14.365 72.1278 21920 21920 21917 QEplus033719.raw F4 819.4 510 771.4 827.6 630 973.9 459 5.93 1 FALSE 1.14E-05 6.31E-16 3.177 -250 108120 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISPDLCGR [R].iSPDLcGR.[G] N-Term(TMT6plex); C6(Carbamidomethyl) 3 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q60784 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Fibrillin-1 (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1 0 2 2 0.4856 0 1 1 1 573.81104 1146.61479 1146.61386 0.81 0.00047 0/0 0 0 53568720 HCD 30 MS2 55.63494 924.9 17.854 72.1301 21921 21921 21917 QEplus033719.raw F4 855.2 657.1 1029.3 1083.4 816.1 1108.4 291 2.43 1 FALSE 0.001284 0.01753 0.304 -250 108129 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous THSASFFK [R].tHSASFFk.[F] N-Term(TMT6plex); K8(TMT6plex) 3 Q3UNI8 D-dopachrome tautomerase OS=Mus musculus OX=10090 GN=Ddt PE=1 SV=1 G3UZN1; G3UYJ7; Q3UNI8 D-dopachrome decarboxylase OS=Mus musculus OX=10090 GN=Ddt PE=1 SV=1; Predicted gene 20441 (Fragment) OS=Mus musculus OX=10090 GN=Gm20441 PE=3 SV=1; D-dopachrome tautomerase OS=Mus musculus OX=10090 GN=Ddt PE=1 SV=1 0 3 3 0.6183 0 1 1 1 461.59955 1382.78409 1382.78326 0.6 0.00028 0/0 0 0 18077294 HCD 30 MS2 60.02829 1152.6 107.755 72.1326 21922 21922 21917 QEplus033719.raw F4 1241.4 965.2 1222.1 1040.3 1319.6 1126.9 338 3.93 1 FALSE 1.14E-05 0.0001264 0.838 -250 108137 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVLPASETACLR [R].hVLPASETAcLR.[E] N-Term(TMT6plex); C10(Carbamidomethyl) 1 Q8BQ47 Protein canopy homolog 4 OS=Mus musculus OX=10090 GN=Cnpy4 PE=1 SV=1 Q8BQ47 Protein canopy homolog 4 OS=Mus musculus OX=10090 GN=Cnpy4 PE=1 SV=1 0 3 3 0.7229 0 1 1 1 528.29114 1582.85886 1582.85728 1 0.00053 0/0 0 0 11929894 HCD 30 MS2 37.53479 783 110 72.1351 21923 21923 21917 QEplus033719.raw F4 733.6 728.5 861.4 611.2 923.6 839.5 399 3.32 1 FALSE 1.14E-05 9.17E-06 1.055 -250 108145 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RALANSLACQGK [K].rALANSLAcQGk.[Y] N-Term(TMT6plex); C9(Carbamidomethyl); K12(TMT6plex) 5 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 Q9CPQ9; A6ZI46; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 1 2 2 0.6885 0 1 1 1 874.00671 1747.00615 1747.00489 0.72 0.00063 0/0 0 0 11596124 HCD 30 MS2 0 517.1 110 72.1376 21924 21924 21917 QEplus033719.raw F4 595.7 300.3 514.9 612.9 365.7 712.8 461 4.43 1 FALSE 1.14E-05 1.95E-08 1.562 -250 108163 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESNPLTAQQTTK [R].eSNPLTAQQTTk.[L] N-Term(TMT6plex); K12(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.7527 0 1 1 1 888.49939 1775.9915 1775.99035 0.65 0.00058 0/0 0 0 7363228.5 HCD 30 MS2 9.964113 499.9 110 72.1427 21926 21926 21917 QEplus033719.raw F4 550.3 395.4 527 625.1 285.2 616.7 416 4.65 3 FALSE 1.14E-05 1.50E-08 1.584 -250 108172 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDLETGENR [R].iDLETGENR.[E] N-Term(TMT6plex) 3 A0A0R4J0I9 Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 Q3U454; A0A0R4J0I9; Q91ZX7 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lrp1 PE=2 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1; Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus OX=10090 GN=Lrp1 PE=1 SV=1 0 2 2 0.1742 0 1 1 1 638.3374 1275.66753 1275.67421 -5.24 -0.00334 0/0 0 0 21137470 HCD 30 MS2 52.71646 975.6 64.142 72.1522 21929 21929 21928 QEplus033719.raw F4 925.5 919.6 1144.9 812.7 1040.3 1010.8 235 2.64 1 FALSE 1.14E-05 0.0001306 0.835 -250 108179 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATDSDVWHK [K].aTDSDVWHk.[L] N-Term(TMT6plex); K9(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.4631 0 1 1 1 506.27753 1516.81803 1516.81601 1.33 0.00067 0/0 0 0 10823847 HCD 30 MS2 52.24553 969.3 102.758 72.1546 21930 21930 21928 QEplus033719.raw F4 1048 540.6 889.4 1370.8 697.7 1269.3 308 2.98 2 FALSE 1.14E-05 5.94E-05 0.9 -250 108186 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDAQVK [K].lDAQVk.[E] N-Term(TMT6plex); K6(TMT6plex) 5 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q99LY0; Q91YQ5; Q5RKP4; Q3U900; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 0 2 2 0.1867 0 1 1 1 566.36102 1131.71477 1131.71378 0.87 0.00049 0/0 0 0 101613176 HCD 30 MS2 33.56017 968.9 11.384 72.1569 21931 21931 21928 QEplus033719.raw F4 939.5 847.3 1027.1 810.4 1206.7 982.3 426 2.25 1 FALSE 0.005006 0.08685 0.043 -250 108213 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDELPAAAPADSAR [K].tDELPAAAPADSAR.[E] N-Term(TMT6plex) 2 A0A0R4J140 Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=1 A0A0R4J140; Z4YLI8 Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=1; Clustered mitochondria protein homolog OS=Mus musculus OX=10090 GN=Cluh PE=1 SV=1 0 2 2 0.7949 0 1 1 1 807.42218 1613.83708 1613.83323 2.39 0.00193 0/0 0 0 2960918.75 HCD 30 MS2 0 199.4 110 72.1642 21934 21934 21928 QEplus033719.raw F4 191.9 141.5 242.8 172.9 182.7 264.7 258 4.29 1 FALSE 1.14E-05 5.20E-12 2.241 -250 108220 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSVELCKK [K].qSVELckk.[D] N-Term(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex); K8(TMT6plex) 7 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 F6Z1R4; Q80U89; Q68FD5; Q5SXR6; Q3UPJ3; Q3TJ98; Q8K2I5 Clathrin heavy chain 1 (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1; Cltc protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1 1 3 3 0.4916 0 1 1 1 560.34296 1679.01432 1679.01289 0.85 0.00048 0/0 0 0 70120920 HCD 30 MS2 29.02727 1220.2 26.022 72.1664 21935 21935 21928 QEplus033719.raw F4 1160 1109.6 1393.6 997 1398.9 1261.8 390 2.38 1 FALSE 7.59E-05 0.002822 0.564 -250 108228 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIGSGCNLDSAR [R].vIGSGcNLDSAR.[F] N-Term(TMT6plex); C6(Carbamidomethyl) 19 A0A6I8MX27; A0A1B0GSX0 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldhb PE=1 SV=1;L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1 A0A1B0GQX5; P00342; Q64483; A0A6I8MX27; A0A1B0GT41; Q3TI99; D3YZE4; D3YVR7; D3YZQ9; Q3THB4; Q3UDU4; Q99K20; A0A1B0GSR9; D3Z7F0; Q3TCI7; A0A1B0GSX0; A0A0N4SVV8; P16125; P06151 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase C chain OS=Mus musculus OX=10090 GN=Ldhc PE=1 SV=2; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldhc PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldhb PE=1 SV=1; L-lactate dehydrogenase A chain (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldhc PE=1 SV=2; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldhc PE=1 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=2; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldhb PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldhb PE=1 SV=1; L-lactate dehydrogenase B chain OS=Mus musculus OX=10090 GN=Ldhb PE=1 SV=2; L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3 0 2 2 0.3512 0 1 1 1 739.38324 1477.7592 1477.76304 -2.6 -0.00192 0/0 0 0 12649634 HCD 30 MS2 0 539.7 110 72.169 21936 21936 21928 QEplus033719.raw F4 563.3 458.6 550.9 473.5 613.5 578.4 214 4.1 2 FALSE 1.14E-05 4.33E-10 1.876 -250 108237 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTDYQLSK [K].gTDYQLSk.[EL] N-Term(TMT6plex); K8(TMT6plex) 3 Q91WQ3 "Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3" Q91WQ3; A2A7S7; F6VXZ2 "Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3; Tyrosine--tRNA ligase OS=Mus musculus OX=10090 GN=Yars PE=1 SV=1; Tyrosyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Yars PE=1 SV=1" 0 2 2 0.4462 0 1 1 1 685.3905 1369.77373 1369.77275 0.71 0.00049 0/0 0 0 10345461 HCD 30 MS2 29.5997 1006.5 110 72.1715 21937 21937 21928 QEplus033719.raw F4 1098.1 710.1 1051.3 1081.6 846.1 1251.6 310 2.51 1 FALSE 0.0002419 0.004948 0.503 -250 108250 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FKDPNAPK [K].fkDPNAPk.[R] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 12 Q8BNM0 High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 Q8BQ02; Q8BNM0; Q6P202; Q58EV5; Q80YZ1; Q3UJK0; Q8C7C4; D3YZ18; Q3UBK2; A0A0J9YUZ4; A0A0J9YUD8; Q497Z6 High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=bM168F16.1 PE=3 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=8; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein B1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 1 2 2 0.5498 0 1 1 1 802.49365 1603.98003 1603.97749 1.58 0.00127 0/0 0 0 5851687 HCD 30 MS2 44.31401 472 110 72.1813 21940 21940 21939 QEplus033719.raw F4 443.5 488.7 513.3 327.9 615.7 442.6 381 2.11 1 FALSE 0.002042 0.03567 0.191 -250 108258 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQGAVEAAK [R].vQGAVEAAk.[V] N-Term(TMT6plex); K9(TMT6plex) 3 Q9WVJ3 Carboxypeptidase Q OS=Mus musculus OX=10090 GN=Cpq PE=1 SV=1 A0A2I3BS14; Q3U496; Q9WVJ3 Carboxypeptidase Q (Fragment) OS=Mus musculus OX=10090 GN=Cpq PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cpq PE=2 SV=1; Carboxypeptidase Q OS=Mus musculus OX=10090 GN=Cpq PE=1 SV=1 0 2 2 0.4944 0 1 1 1 665.91028 1330.81328 1330.80947 2.86 0.0019 0/0 0 0 11199138 HCD 30 MS2 13.34872 795.8 110 72.1838 21941 21941 21939 QEplus033719.raw F4 793.8 591.5 903 831.3 725.5 929.7 457 3.58 1 FALSE 1.14E-05 1.11E-06 1.229 -250 108267 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERPVEVGDWR [K].eRPVEVGDWR.[K] N-Term(TMT6plex) 3 F6QC77 "Troponin I, slow skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1" F6QC77; Q9WUZ5; D3YUN3 "Troponin I, slow skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1; Troponin I, slow skeletal muscle OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=3; Troponin I, slow skeletal muscle OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1" 0 3 3 0.4799 0 1 1 1 491.26718 1471.78699 1471.78549 1.02 0.0005 0/0 0 0 65518308 HCD 30 MS2 40.49238 697.9 20.368 72.1861 21942 21942 21939 QEplus033719.raw F4 713.6 398.1 849.2 662 562.4 1001.9 272 3.23 1 FALSE 1.14E-05 0.0005199 0.719 -250 108273 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RALANSLACQGK [K].rALANSLAcQGk.[Y] N-Term(TMT6plex); C9(Carbamidomethyl); K12(TMT6plex) 5 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 Q9CPQ9; A6ZI46; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 1 4 4 0.6726 0 1 1 1 437.50735 1747.00759 1747.00489 1.54 0.00067 0/0 0 0 63252064 HCD 30 MS2 10.20732 484.5 26.841 72.1884 21943 21943 21939 QEplus033719.raw F4 539.7 293.7 496.1 547.7 384.9 644.8 443 4.49 1 FALSE 1.14E-05 2.17E-05 0.983 -250 108289 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DFIVQR [R].dFIVQR.[IY] N-Term(TMT6plex) 1 Q9CQ75 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Mus musculus OX=10090 GN=Ndufa2 PE=1 SV=3 Q9CQ75 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Mus musculus OX=10090 GN=Ndufa2 PE=1 SV=3 0 2 2 0.2277 0 1 1 1 503.79858 1006.58989 1006.5883 1.58 0.0008 0/0 0 0 26626414 HCD 30 MS2 36.10091 778.9 37.857 72.1929 21945 21945 21939 QEplus033719.raw F4 798.4 589.7 844.7 845.4 672.4 922.5 247 2.24 1 FALSE 0.003058 0.05962 0.115 -250 108290 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DFLVQR [R].dFLVQR.[IY] N-Term(TMT6plex) 5 Q3UYK3-2; Q5SVR0; Q6PGG9; Q5SVR0-2; Q3UYK3 Isoform 2 of TBC1 domain family member 9 OS=Mus musculus OX=10090 GN=Tbc1d9; TBC1 domain family member 9B OS=Mus musculus OX=10090 GN=Tbc1d9b PE=1 SV=1; Tbc1d9 protein OS=Mus musculus OX=10090 GN=Tbc1d9 PE=2 SV=1; Isoform 2 of TBC1 domain family member 9B OS=Mus musculus OX=10090 GN=Tbc1d9b; TBC1 domain family member 9 OS=Mus musculus OX=10090 GN=Tbc1d9 PE=2 SV=2 0 2 2 0.2277 0 1 2 2 503.79858 1006.58989 1006.5883 1.58 0.0008 0/0 0 0 26626414 HCD 30 MS2 36.10091 778.9 37.857 72.1929 21945 21945 21939 QEplus033719.raw F4 798.4 589.7 844.7 845.4 672.4 922.5 247 2.24 1 FALSE 0.003058 0.05962 0.115 -250 108299 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SKEEEDTPGSSLEK [R].skEEEDTPGSSLEk.[Q] N-Term(TMT6plex); K2(TMT6plex); K14(TMT6plex) 7 E9Q3Z5 Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1 E9Q3Z5; E3VVQ8; Q8K4L2; Q8K4L3; Q8K4L3-3; A0A1B0GS91; Q8C9L0 Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin muscle-specific isoform OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1; Archvillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Isoform 2 of Supervillin OS=Mus musculus OX=10090 GN=Svil; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Svil protein OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1 1 3 3 0.6808 0 1 1 1 741.73828 2223.20029 2223.19593 1.96 0.00145 0/0 0 0 8232704 HCD 30 MS2 13.15974 590.6 110 72.1954 21946 21946 21939 QEplus033719.raw F4 596.8 482.4 709.3 517.2 536.1 701.6 452 4.73 1 FALSE 1.14E-05 1.96E-14 2.701 -250 108303 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FPTHVK [R].fPTHVk.[D] N-Term(TMT6plex); K6(TMT6plex) 2 Q99LB6 Methionine adenosyltransferase 2 subunit beta OS=Mus musculus OX=10090 GN=Mat2b PE=1 SV=1 Q99LB6-2; Q99LB6 Isoform 2 of Methionine adenosyltransferase 2 subunit beta OS=Mus musculus OX=10090 GN=Mat2b; Methionine adenosyltransferase 2 subunit beta OS=Mus musculus OX=10090 GN=Mat2b PE=1 SV=1 0 3 3 0.4601 0 1 1 1 396.24911 1186.73279 1186.73485 -1.73 -0.00069 0/0 0 0 6294061.5 HCD 30 MS2 65.8856 710.5 110 72.1979 21947 21947 21939 QEplus033719.raw F4 819 596.5 794.8 583.4 692.6 776.6 226 2.63 1 FALSE 0.001615 0.02588 0.239 -250 108310 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LHVAVK [K].lHVAVk.[V] N-Term(TMT6plex); K6(TMT6plex) 9 A0A1L1STE4 Interleukin enhancer-binding factor 3 OS=Mus musculus OX=10090 GN=Ilf3 PE=1 SV=1 Q91WM1; A0A1L1SU19; Q8C5B7; Q45VK6; Q91WM1-2; A0A1L1STE4; Q9Z1X4; Q9Z1X4-3; Q45VK5 Spermatid perinuclear RNA-binding protein OS=Mus musculus OX=10090 GN=Strbp PE=1 SV=1; Interleukin enhancer-binding factor 3 (Fragment) OS=Mus musculus OX=10090 GN=Ilf3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Strbp PE=2 SV=1; Nuclear factor 90 OS=Mus musculus OX=10090 GN=Ilf3 PE=2 SV=1; Isoform 2 of Spermatid perinuclear RNA-binding protein OS=Mus musculus OX=10090 GN=Strbp; Interleukin enhancer-binding factor 3 OS=Mus musculus OX=10090 GN=Ilf3 PE=1 SV=1; Interleukin enhancer-binding factor 3 OS=Mus musculus OX=10090 GN=Ilf3 PE=1 SV=2; Isoform 3 of Interleukin enhancer-binding factor 3 OS=Mus musculus OX=10090 GN=Ilf3; Interleukin enhancer-binding factor 3 OS=Mus musculus OX=10090 GN=Ilf3 PE=1 SV=1 0 3 3 0.135 0 1 1 1 375.59061 1124.75727 1124.75559 1.49 0.00056 0/0 0 0 5541079 HCD 30 MS2 26.73927 675.9 110 72.2003 21948 21948 21939 QEplus033719.raw F4 726.6 543.1 728.8 537 720.4 799.6 30 2 1 FALSE 0.002148 0.04084 0.171 -250 108320 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTYTDCAIK [K].gTYTDcAIk.[K] N-Term(TMT6plex); C6(Carbamidomethyl); K9(TMT6plex) 2 Q04857 Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 Q8C6Y0; Q04857 VWFA domain-containing protein OS=Mus musculus OX=10090 GN=Col6a1 PE=2 SV=1; Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 0 2 2 0.624 0 1 1 1 743.90454 1486.80181 1486.79759 2.84 0.00211 0/0 0 0 3595271.75 HCD 30 MS2 0 422.8 110 72.2029 21949 21949 21939 QEplus033719.raw F4 416.9 404.1 455.4 361 480.2 418.9 287 3.59 1 FALSE 1.14E-05 0.0003885 0.744 -250 108327 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELSFGR [R].eLSFGR.[G] N-Term(TMT6plex) 5 Q922R8 Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=3 Q3TML0; Q922R8; F7DBQ0; Q3THH1; Q3TJL8 Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=1; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=3; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=1; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=2 SV=1; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=2 SV=1 0 2 2 0.4683 0 1 1 1 469.26956 937.53185 937.53045 1.49 0.0007 0/0 0 0 56533124 HCD 30 MS2 20.55127 849.9 22.444 72.2102 21951 21951 21950 QEplus033719.raw F4 729.5 701.6 960.5 722.1 954.9 1030.7 117 2.05 1 FALSE 0.005635 0.0948 0.021 -250 108331 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMSEALK [R].gMSEALk.[V] N-Term(TMT6plex); K7(TMT6plex) 4 Q8R0P4 Mth938 domain-containing protein OS=Mus musculus OX=10090 GN=Aamdc PE=1 SV=1 D3YWY5; Q8R0P4; D3YZD8; D3Z442 Mth938 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Aamdc PE=1 SV=1; Mth938 domain-containing protein OS=Mus musculus OX=10090 GN=Aamdc PE=1 SV=1; Mth938 domain-containing protein OS=Mus musculus OX=10090 GN=Aamdc PE=1 SV=1; Mth938 domain-containing protein OS=Mus musculus OX=10090 GN=Aamdc PE=1 SV=1 0 2 2 0.3116 0 1 1 1 597.35175 1193.69621 1193.69642 -0.17 -0.0001 0/0 0 0 10199159 HCD 30 MS2 66.87482 1382.9 110 72.2127 21952 21952 21950 QEplus033719.raw F4 1513.3 777.5 1485.8 1509.6 1121.4 1889.8 396 2.15 1 FALSE 0.0002019 0.004047 0.526 -250 108339 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLNPSGAK [R].vLNPSGAk.[T] N-Term(TMT6plex); K8(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.4 0 1 1 1 622.39325 1243.77922 1243.77744 1.43 0.00089 0/0 0 0 18891920 HCD 30 MS2 31.88645 1105.5 110 72.2152 21953 21953 21950 QEplus033719.raw F4 1278.6 626.6 1117.4 1228.4 780.7 1601.4 231 2.75 1 FALSE 0.0003996 0.00702 0.458 -250 108358 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYNVGVK [K].kYNVGVk.[C] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 9 O88844 Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2 Q3TJ51; Q0QER9; O88844; Q5HZJ8; A0A087WPT4; A0A087WRS9; D3YVY3; Q8C338; A0A087WRM4 Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; IDP (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1 1 3 3 0.4299 0 1 1 1 498.99503 1494.97052 1494.96111 6.3 0.00314 0/0 0 0 9321326 HCD 30 MS2 79.68624 1699.8 81.549 72.22 21955 21955 21950 QEplus033719.raw F4 1697.3 1353.6 1787.7 1537.7 1659.6 2162.6 79 3.35 1 FALSE 1.14E-05 0.0001955 0.801 -250 108368 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLGQLHGGPSSCSATGTNR [R].vLGQLHGGPSScSATGTNR.[S] N-Term(TMT6plex); C12(Carbamidomethyl) 1 P15636 SWISS-PROT:P15636 Protease I precursor Lysyl endopeptidase Achromobacter lyticus. P15636 SWISS-PROT:P15636 Protease I precursor Lysyl endopeptidase Achromobacter lyticus. 0 3 3 0.847 0 1 1 1 710.02826 2128.07022 2128.07667 -3.03 -0.00215 0/0 0 0 8050144.5 HCD 30 MS2 0 212.6 110 72.2225 21956 21956 21950 QEplus033719.raw F4 262 164.1 192.7 209.1 287 160.7 234 7.32 1 TRUE 1.14E-05 6.31E-16 3.454 -250 108375 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HGMFLVR [R].hGMFLVR.[D] N-Term(TMT6plex) 4 P47941 Crk-like protein OS=Mus musculus OX=10090 GN=Crkl PE=1 SV=2 A0A338P675; P47941; Q8R5B8; A0A338P6Q0 Crk-like protein (Fragment) OS=Mus musculus OX=10090 GN=Crkl PE=1 SV=1; Crk-like protein OS=Mus musculus OX=10090 GN=Crkl PE=1 SV=2; Crkl protein OS=Mus musculus OX=10090 GN=Crkl PE=2 SV=1; Crk-like protein OS=Mus musculus OX=10090 GN=Crkl PE=1 SV=1 0 3 3 0.5726 0 1 1 1 363.54636 1088.62452 1088.62364 0.81 0.00029 0/0 0 0 6120082.5 HCD 30 MS2 45.74771 419.8 110 72.225 21957 21957 21950 QEplus033719.raw F4 393 349.1 494.8 356.9 431.3 493.8 309 3.72 1 FALSE 1.14E-05 0.0001661 0.815 -250 108380 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASTSDYQVISDR [K].aSTSDYQVISDR.[Q] N-Term(TMT6plex) 1 Q8R4R6 Nucleoporin NUP35 OS=Mus musculus OX=10090 GN=Nup35 PE=1 SV=2 Q8R4R6 Nucleoporin NUP35 OS=Mus musculus OX=10090 GN=Nup35 PE=1 SV=2 0 2 2 0.7131 0 1 1 1 785.89911 1570.79094 1570.79103 -0.06 -0.00004 0/0 0 0 4273170.5 HCD 30 MS2 0 258.7 110 72.2275 21958 21958 21950 QEplus033719.raw F4 267.8 225.2 284.6 229.3 269 276.4 182 4.67 1 FALSE 1.14E-05 4.32E-10 1.876 -250 108388 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILHPLTR [K].iLHPLTR.[N] N-Term(TMT6plex) 8 S4R1P5 Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=1 Q6ZQ59; Q91ZU6-3; S4R2A8; Q91ZU6-4; S4R1Y6; E9Q9X1; A0A087WSP0; S4R1P5 MKIAA0728 protein (Fragment) OS=Mus musculus OX=10090 GN=Dst PE=2 SV=1; Isoform 3 of Dystonin OS=Mus musculus OX=10090 GN=Dst; Dystonin (Fragment) OS=Mus musculus OX=10090 GN=Dst PE=1 SV=1; Isoform 4 of Dystonin OS=Mus musculus OX=10090 GN=Dst; Dystonin (Fragment) OS=Mus musculus OX=10090 GN=Dst PE=1 SV=2; Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=2; Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=1; Dystonin OS=Mus musculus OX=10090 GN=Dst PE=1 SV=1 0 3 3 0.3801 0 1 1 1 360.2359 1078.69315 1078.69343 -0.26 -0.00009 0/0 0 0 2974188 HCD 30 MS2 61.19094 144.4 110 72.23 21959 21959 21950 QEplus033719.raw F4 152.5 102.3 154.5 151 127.1 179.1 46 2.92 1 FALSE 0.000565 0.008622 0.428 -250 108398 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERPVEVGDWR [K].eRPVEVGDWR.[K] N-Term(TMT6plex) 3 F6QC77 "Troponin I, slow skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1" F6QC77; Q9WUZ5; D3YUN3 "Troponin I, slow skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1; Troponin I, slow skeletal muscle OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=3; Troponin I, slow skeletal muscle OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1" 0 2 2 0.5093 0 1 1 1 736.39813 1471.78899 1471.78549 2.38 0.00175 0/0 0 0 12321085 HCD 30 MS2 16.87728 250.6 110 72.2325 21960 21960 21950 QEplus033719.raw F4 258.3 146.6 297.8 276.2 178.9 346.1 274 2.69 1 FALSE 0.0004091 0.007399 0.45 -250 108410 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSGTLETK [K].vSGTLETk.[Y] N-Term(TMT6plex); K8(TMT6plex) 5 G3UX26 Outer mitochondrial membrane protein porin 2 OS=Mus musculus OX=10090 GN=Vdac2 PE=1 SV=1 A0A286YCR8; D3YZT5; G3UX26; D3YUN8; Q60930 Outer mitochondrial membrane protein porin 2 (Fragment) OS=Mus musculus OX=10090 GN=Vdac2 PE=1 SV=1; Outer mitochondrial membrane protein porin 2 (Fragment) OS=Mus musculus OX=10090 GN=Vdac2 PE=1 SV=1; Outer mitochondrial membrane protein porin 2 OS=Mus musculus OX=10090 GN=Vdac2 PE=1 SV=1; Outer mitochondrial membrane protein porin 2 (Fragment) OS=Mus musculus OX=10090 GN=Vdac2 PE=1 SV=1; Voltage-dependent anion-selective channel protein 2 OS=Mus musculus OX=10090 GN=Vdac2 PE=1 SV=2 0 2 2 0.588 0 1 1 1 646.89532 1292.78337 1292.78259 0.61 0.00039 0/0 0 0 188457552 HCD 30 MS2 32.13933 870 10.245 72.2421 21963 21963 21961 QEplus033719.raw F4 802.1 693.4 982.3 861.3 799 1081.7 260 2.84 1 FALSE 3.35E-05 0.001233 0.643 -250 108418 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQPDEELKPK [K].gQPDEELkPk.[K] N-Term(TMT6plex); K8(TMT6plex); K10(TMT6plex) 2 Q91WQ3 "Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3" Q91WQ3; A2A7S7 "Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3; Tyrosine--tRNA ligase OS=Mus musculus OX=10090 GN=Yars PE=1 SV=1" 0 3 3 0.5031 0 1 1 1 610.03094 1828.07828 1828.07832 -0.02 -0.00001 0/0 0 0 36909856 HCD 30 MS2 11.8453 1295.3 46.752 72.2443 21964 21964 21961 QEplus033719.raw F4 1384.4 1061.1 1439.8 1080.6 1395.1 1410.5 356 3.18 1 FALSE 1.14E-05 4.79E-05 0.918 -250 108427 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LIQYCHSK [K].lIQYcHSk.[G] N-Term(TMT6plex); C5(Carbamidomethyl); K8(TMT6plex) 4 D3Z494; P45377 "Aldo-keto reductase family 1, member B10 (aldose reductase) OS=Mus musculus OX=10090 GN=Akr1b10 PE=1 SV=1;Aldose reductase-related protein 2 OS=Mus musculus OX=10090 GN=Akr1b8 PE=1 SV=2" D3Z494; G5E895; Q8BIV6; P45377 "Aldo-keto reductase family 1, member B10 (aldose reductase) OS=Mus musculus OX=10090 GN=Akr1b10 PE=1 SV=1; Aldo-keto reductase family 1, member B10 (aldose reductase) OS=Mus musculus OX=10090 GN=Akr1b10 PE=1 SV=1; Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b10 PE=2 SV=1; Aldose reductase-related protein 2 OS=Mus musculus OX=10090 GN=Akr1b8 PE=1 SV=2" 0 3 3 0.6298 0 1 1 1 502.95529 1506.85132 1506.85029 0.68 0.00034 0/0 0 0 37467596 HCD 30 MS2 13.19778 1171.9 53.249 72.2466 21965 21965 21961 QEplus033719.raw F4 1202 923.9 1304.9 1072.9 1176.4 1351.1 427 3.89 2 FALSE 1.14E-05 7.44E-06 1.072 -250 108447 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIDVSKK [R].gIDVSkk.[T] N-Term(TMT6plex); K6(TMT6plex); K7(TMT6plex) 7 Q8R550-3 Isoform 3 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1 Q8R550-4; Q8R550-6; Q8R550-3; Q8R550; Q3TSX2; Q8R550-5; Q3TA88 Isoform 4 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1; Isoform 6 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1; Isoform 3 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1; SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=1 SV=1; SH3 domain-containing protein OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=2 SV=1; Isoform 5 of SH3 domain-containing kinase-binding protein 1 OS=Mus musculus OX=10090 GN=Sh3kbp1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Sh3kbp1 PE=2 SV=1 1 3 3 0.4108 0 1 1 1 478.6481 1433.92975 1433.92948 0.19 0.00009 0/0 0 0 15533179 HCD 30 MS2 25.37124 1626.4 110 72.2536 21968 21968 21961 QEplus033719.raw F4 1758.9 1381.4 1805.9 1348.2 1893.3 1570.8 287 1.85 1 FALSE 0.002233 0.04327 0.163 -250 108463 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEEHLEK [K].kLEEHLEk.[L] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 3 Q5BKS5 Hook homolog 3 (Drosophila) OS=Mus musculus OX=10090 GN=Hook3 PE=2 SV=1 Q3UUZ6; Q5BKS5; Q8BUK6 HOOK domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hook3 PE=2 SV=1; Hook homolog 3 (Drosophila) OS=Mus musculus OX=10090 GN=Hook3 PE=2 SV=1; Protein Hook homolog 3 OS=Mus musculus OX=10090 GN=Hook3 PE=1 SV=2 1 4 4 0.513 0 1 1 1 429.01843 1713.0519 1713.05138 0.3 0.00013 0/0 0 0 11523688 HCD 30 MS2 37.47775 618.3 96.247 72.2583 21970 21970 21961 QEplus033719.raw F4 660.6 465.4 682.1 473.7 690.5 737.3 245 3.45 1 FALSE 1.14E-05 0.0002045 0.798 -250 108469 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IYEDGDDDMKR [K].iYEDGDDDMkR.[T] N-Term(TMT6plex); K10(TMT6plex) 1 Q9CXW3 Calcyclin-binding protein OS=Mus musculus OX=10090 GN=Cacybp PE=1 SV=1 Q9CXW3 Calcyclin-binding protein OS=Mus musculus OX=10090 GN=Cacybp PE=1 SV=1 1 3 3 0.7103 0 1 1 1 605.63916 1814.90293 1814.89948 1.9 0.00115 0/0 0 0 7600199.5 HCD 30 MS2 32.78119 840.1 110 72.2608 21971 21971 21961 QEplus033719.raw F4 815.6 731.4 943.9 746.9 897.5 905.3 177 3.97 1 FALSE 1.14E-05 1.73E-06 1.192 -250 108477 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIDCAQVYQNEK [R].hIDcAQVYQNEk.[E] N-Term(TMT6plex); C4(Carbamidomethyl); K12(TMT6plex) 5 Q3UDY1 Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1 Q3TCL2; D3YVJ7; Q3ULP0; Q3UDY1; Q5U415 "Aldo_ket_red domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1; Aldo-keto reductase family 1, member B3 (aldose reductase) (Fragment) OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1; Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1; Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1; Aldo-keto reductase family 1, member B3 (Aldose reductase) OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1" 0 3 3 0.7266 0 1 1 1 655.00842 1963.01072 1963.01077 -0.03 -0.00002 0/0 0 0 2249329.25 HCD 30 MS2 59.96101 752.8 110 72.2681 21973 21973 21972 QEplus033719.raw F4 772.6 437.6 746.4 917.5 601.9 1041 303 3.84 1 FALSE 1.14E-05 2.00E-06 1.18 -250 108495 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGDLLAAQAR [K].eGDLLAAQAR.[L] N-Term(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 0 2 2 0.6298 0 1 1 1 636.85986 1272.71245 1272.71093 1.19 0.00076 0/0 0 0 49405044 HCD 30 MS2 4.658725 871 52.181 72.2729 21975 21975 21972 QEplus033719.raw F4 963.2 721.5 887.9 706.9 992.9 953.7 348 3.62 1 FALSE 1.14E-05 3.73E-06 1.129 -250 108524 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSAGAPSVENVK [R].gSAGAPSVENVk.[N] N-Term(TMT6plex); K12(TMT6plex) 4 P49443 Protein phosphatase 1A OS=Mus musculus OX=10090 GN=Ppm1a PE=1 SV=1 Q9EQE2; Q9EQE3; P49443; Q8R4T7 Protein-serine/threonine phosphatase OS=Mus musculus OX=10090 GN=Ppm1a PE=1 SV=1; Protein phosphatase 2C alpha 3 OS=Mus musculus OX=10090 GN=Ppm1a PE=2 SV=1; Protein phosphatase 1A OS=Mus musculus OX=10090 GN=Ppm1a PE=1 SV=1; PP alpha 2 OS=Mus musculus OX=10090 GN=Ppm1a PE=2 SV=1 0 2 2 0.6865 0 1 1 1 787.4516 1573.89592 1573.89499 0.59 0.00046 0/0 0 0 3541983.75 HCD 30 MS2 27.02157 298 110 72.2849 21980 21980 21972 QEplus033719.raw F4 297.4 264.8 326.2 277.3 288.4 333.7 413 4.21 1 FALSE 1.14E-05 1.45E-11 2.156 -250 108530 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QKPITPETAEK [K].qkPITPETAEk.[L] N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex) 3 P60766 Cell division control protein 42 homolog OS=Mus musculus OX=10090 GN=Cdc42 PE=1 SV=2 P60766; P60766-1; Q3UL78 Cell division control protein 42 homolog OS=Mus musculus OX=10090 GN=Cdc42 PE=1 SV=2; Isoform 1 of Cell division control protein 42 homolog OS=Mus musculus OX=10090 GN=Cdc42; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cdc42 PE=2 SV=1 0 3 3 0.7072 0 1 1 1 643.72595 1929.1633 1929.16239 0.47 0.0003 0/0 0 0 9785853 HCD 30 MS2 0 824 110 72.2874 21981 21981 21972 QEplus033719.raw F4 902.8 754.5 903 650.7 905.5 827.6 279 5.26 1 FALSE 1.14E-05 4.14E-08 1.5 -250 108539 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEEVGVR [R].lEEVGVR.[A] N-Term(TMT6plex) 1 Q03247 SWISS-PROT:Q03247 (Bos taurus) Apolipoprotein E precursor Q03247 SWISS-PROT:Q03247 (Bos taurus) Apolipoprotein E precursor 0 2 2 0.0882 0 1 1 1 515.81177 1030.61626 1030.60943 6.63 0.00342 0/0 0 0 9745863 HCD 30 MS2 38.66941 1220.5 70.12 72.2897 21982 21982 21972 QEplus033719.raw F4 1150.4 976.4 1242.5 1087.2 1503 1363.4 388 1.36 1 TRUE 0.002586 0.05117 0.139 -250 108549 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGKPHTVPCK [K].iGkPHTVPck.[V] N-Term(TMT6plex); K3(TMT6plex); C9(Carbamidomethyl); K10(TMT6plex) 10 Q3TXS9 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1 Q3TXS9; D3YVC1; Q3TLE5; Q3TI78; Q3TXR5; O89072; P25444; Q3TL20; D3YWJ3; Q3UB36 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 (Fragment) OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 (Fragment) OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=3; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1 0 4 4 0.6491 0 1 1 1 456.78409 1824.11452 1824.11327 0.69 0.00031 0/0 0 0 128936304 HCD 30 MS2 16.94519 562.9 11.904 72.297 21984 21984 21983 QEplus033719.raw F4 536.6 439.5 659.4 469.6 620.1 652.3 263 3.42 1 FALSE 1.14E-05 0.0009434 0.667 -250 108557 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FKDPNAPK [K].fkDPNAPk.[R] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 12 Q8BNM0 High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 Q8BQ02; Q8BNM0; Q6P202; Q58EV5; Q80YZ1; Q3UJK0; Q8C7C4; D3YZ18; Q3UBK2; A0A0J9YUZ4; A0A0J9YUD8; Q497Z6 High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=bM168F16.1 PE=3 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=8; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein B1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 1 3 3 0.6068 0 1 1 1 535.33142 1603.97971 1603.97749 1.38 0.00074 0/0 0 0 100439576 HCD 30 MS2 9.556664 1090.3 17.795 72.2992 21985 21985 21983 QEplus033719.raw F4 988.7 1155.6 1207.4 659.9 1576.9 953.4 372 3.23 1 FALSE 1.14E-05 0.0008814 0.673 -250 108575 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIAAHIK [K].dIAAHIk.[K] N-Term(TMT6plex); K7(TMT6plex) 3 Q9D6F6 Dynein light chain OS=Mus musculus OX=10090 GN=Dynll1 PE=2 SV=1 Q80ZS7; Q9D6F6; P63168 "Dynein light chain OS=Mus musculus OX=10090 GN=BC048507 PE=1 SV=1; Dynein light chain OS=Mus musculus OX=10090 GN=Dynll1 PE=2 SV=1; Dynein light chain 1, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll1 PE=1 SV=1" 0 3 3 0.3596 0 1 1 1 409.26099 1225.76841 1225.76688 1.25 0.00051 0/0 0 0 69793128 HCD 30 MS2 10.44453 601.7 18.204 72.306 21988 21988 21983 QEplus033719.raw F4 664.2 488.2 674.1 452.4 650.5 680.7 191 3.42 1 FALSE 1.14E-05 0.0004846 0.725 -250 108588 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDIDIRK [K].cDIDIRk.[D] N-Term(TMT6plex); C1(Carbamidomethyl); K7(TMT6plex) 12 Q3UIJ3; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q3TG92; P63268; Q3UIJ3; Q9CXK3; Q61275; Q3U122; Q61272; P62737; P68134; P68033; Q61852; Q61264 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1" 1 3 3 0.2041 0 1 1 1 459.9361 1377.79374 1377.79244 0.94 0.00043 0/0 0 0 20773578 HCD 30 MS2 18.09118 1135.8 70.795 72.3105 21990 21990 21983 QEplus033719.raw F4 1465.5 626.4 1301.1 1160.6 845.4 1416 486 2.45 3 FALSE 0.003793 0.07164 0.083 -250 108595 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KIQQLK [K].kIQQLk.[N] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 2 E9PV44 ATP synthase F1 subunit epsilon OS=Mus musculus OX=10090 GN=Atpif1 PE=1 SV=1 E9PV44; O35143 "ATP synthase F1 subunit epsilon OS=Mus musculus OX=10090 GN=Atpif1 PE=1 SV=1; ATPase inhibitor, mitochondrial OS=Mus musculus OX=10090 GN=Atp5if1 PE=1 SV=2" 1 3 3 0.083 0 1 1 1 482.33228 1444.98227 1444.98185 0.3 0.00014 0/0 0 0 11778869 HCD 30 MS2 39.70316 1761.2 110 72.313 21991 21991 21983 QEplus033719.raw F4 1898 1473.1 1821 1632.8 1954.2 1787.8 111 2.41 1 FALSE 0.001567 0.02386 0.252 -250 108605 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAAVLMEQER [K].qAAVLMEQER.[Q] N-Term(TMT6plex) 7 Q80W39 "Splicing factor 3b, subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1" Q80W39; Q3UAI4; Q3UBH2; Q9CS24; Q3UQU5; A0A494B9S9; Q3UJB0 "Splicing factor 3b, subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; SAP domain-containing protein OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; SAP domain-containing protein OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; SAP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; SAP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; Splicing factor 3b, subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Sf3b2 PE=1 SV=1; Splicing factor 3b, subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=1 SV=1" 0 2 2 0.6802 0 1 1 1 702.38068 1403.75408 1403.75142 1.9 0.00133 0/0 0 0 12022679 HCD 30 MS2 0 381.9 110 72.3156 21992 21992 21983 QEplus033719.raw F4 390 354.7 423.6 285.4 434.2 403.7 305 3.44 1 FALSE 1.14E-05 2.23E-08 1.551 -250 108615 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEEVVVK [R].tEEVVVk.[E] N-Term(TMT6plex); K7(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.3824 0 1 1 1 631.39252 1261.77776 1261.77677 0.78 0.00049 0/0 0 0 10148938 HCD 30 MS2 39.98678 1212.3 110 72.3181 21993 21993 21983 QEplus033719.raw F4 1305 648.6 1140.2 1587.4 814.7 1778 377 2.72 2 FALSE 0.0001603 0.00374 0.535 -250 108622 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSDGAASSYQLK [K].gSDGAASSYQLk.[Q] N-Term(TMT6plex); K12(TMT6plex) 9 E9Q586 Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1 E9Q3M3; E9Q586; O08788-2; D3YX34; Q3T9V8; O08788; Q6NZM3; Q3TB96; Q3TRF1 Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Isoform 2 of Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=1 SV=3; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1; Dynactin subunit 1 OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1; CAP-Gly domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dctn1 PE=2 SV=1 0 2 2 0.6318 0 1 1 1 821.44598 1641.88469 1641.88482 -0.08 -0.00006 0/0 0 0 7441551.5 HCD 30 MS2 0 351.4 110 72.3279 21996 21996 21994 QEplus033719.raw F4 346.7 291.7 384.2 322.8 410.5 352.7 327 4.4 1 FALSE 1.14E-05 9.35E-12 2.192 -250 108627 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FQHILR [K].fQHILR.[V] N-Term(TMT6plex) 6 Q561N5 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1 S4R1N6; Q561N5; Q3TW65; F6YVP7; A0A3Q4EGP3; A0A1Y7VKY1 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=3 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps6 PE=3 SV=2; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=4 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps5 PE=3 SV=1 0 2 2 0.3114 0 1 1 1 521.82245 1042.63762 1042.63592 1.64 0.00085 0/0 0 0 53798020 HCD 30 MS2 49.9718 830.2 18.056 72.3302 21997 21997 21994 QEplus033719.raw F4 854.5 552 858.1 885 762.8 1069 236 1.67 1 FALSE 0.00557 0.09412 0.023 -250 108633 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVLSAEK [K].aVLSAEk.[L] N-Term(TMT6plex); K7(TMT6plex) 7 Q3TWG9; A0A140LHR4 Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1;Serpin H1 (Fragment) OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=1 A0A140LHK0; Q8BVU9; Q3TWG9; Q8BV87; Q3TMD2; A0A140LHR4; P19324 Serpin H1 (Fragment) OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Collagen-binding protein OS=Mus musculus OX=10090 GN=Serpinh1 PE=2 SV=1; Serpin H1 (Fragment) OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=1; Serpin H1 OS=Mus musculus OX=10090 GN=Serpinh1 PE=1 SV=3 0 3 3 0.351 0 1 1 1 392.58502 1175.74051 1175.73999 0.44 0.00017 0/0 0 0 37436544 HCD 30 MS2 14.24619 515.8 30.255 72.3324 21998 21998 21994 QEplus033719.raw F4 491.5 478.2 539.8 425.9 648.1 511.2 440 3.02 2 FALSE 0.001877 0.03176 0.208 -250 108643 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TRPTVAAGAVGLAQR [R].tRPTVAAGAVGLAQR.[A] N-Term(TMT6plex) 3 P45952 "Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadm PE=1 SV=1" P45952; Q91WS8; Q8BJT5 "Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadm PE=1 SV=1; Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadm PE=2 SV=1; Acyl-CoA_dh_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Acadm PE=2 SV=1" 0 3 3 0.6631 0 1 1 1 566.33917 1697.00296 1697.00197 0.59 0.00033 0/0 0 0 34540368 HCD 30 MS2 38.13226 710.3 32.461 72.3347 21999 21999 21994 QEplus033719.raw F4 668.9 586.1 808.5 641.5 799.1 757.9 340 5.67 1 FALSE 1.14E-05 1.34E-15 2.922 -250 108651 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVVAADK [K].vVVAADk.[A] N-Term(TMT6plex); K7(TMT6plex) 10 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; Q8BUC9; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; Q8BIH3; E9Q8N1; Q8BUJ6 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.1845 0 1 1 1 580.37531 1159.74333 1159.74508 -1.51 -0.00087 0/0 0 0 27768382 HCD 30 MS2 27.34119 1266.4 57.642 72.3369 22000 22000 21994 QEplus033719.raw F4 1527.1 478.1 1194.6 1842.3 632.9 1923.4 268 2.71 2 FALSE 0.0002814 0.005633 0.487 -250 108661 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYALDK [K].sYALDk.[D] N-Term(TMT6plex); K6(TMT6plex) 1 Q6PB66 "Leucine-rich PPR motif-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Lrpprc PE=1 SV=2" Q6PB66 "Leucine-rich PPR motif-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Lrpprc PE=1 SV=2" 0 2 2 0.3077 0 1 1 1 577.8457 1154.68413 1154.68215 1.72 0.00099 0/0 0 0 24632874 HCD 30 MS2 29.66425 1339.7 52.09 72.3392 22001 22001 21994 QEplus033719.raw F4 1281.7 1036.3 1560.3 1384.5 1164 1611.6 196 2.47 1 FALSE 0.00315 0.06169 0.109 -250 108671 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYILQEDGR [K].gYILQEDGR.[S] N-Term(TMT6plex) 3 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q3TNW1 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1 0 2 2 0.4414 0 1 1 1 640.34674 1279.6862 1279.68438 1.42 0.00091 0/0 0 0 21348598 HCD 30 MS2 16.57609 1269.7 110 72.3417 22002 22002 21994 QEplus033719.raw F4 1186.4 929.7 1496.2 1598.7 863.9 1543.2 304 3.24 1 FALSE 1.14E-05 2.43E-05 0.974 -250 108678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLTPSYYR [R].tLTPSYYR.[G] N-Term(TMT6plex) 3 A0A3Q4EI12 Ras-related protein Rab-18 OS=Mus musculus OX=10090 GN=Rab18 PE=1 SV=1 A0A452J8C1; A0A3Q4EI12; P35293 Ras-related protein Rab-18 OS=Mus musculus OX=10090 GN=Rab18 PE=1 SV=1; Ras-related protein Rab-18 OS=Mus musculus OX=10090 GN=Rab18 PE=1 SV=1; Ras-related protein Rab-18 OS=Mus musculus OX=10090 GN=Rab18 PE=1 SV=2 0 2 2 0.534 0 1 1 1 615.33978 1229.67229 1229.67275 -0.38 -0.00023 0/0 0 0 21341646 HCD 30 MS2 26.68718 1324.2 110 72.3442 22003 22003 21994 QEplus033719.raw F4 1267.4 971.1 1433.5 1427.6 1353.9 1491.7 278 2.94 1 FALSE 0.003397 0.0654 0.1 -250 108681 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLHLAEAQTK [K].qLHLAEAQTk.[E] N-Term(TMT6plex); K10(TMT6plex) 3 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1 0 3 3 0.7073 0 1 1 1 532.98785 1596.94901 1596.94736 1.03 0.00055 0/0 0 0 20089888 HCD 30 MS2 57.84163 1131.7 62.806 72.3465 22004 22004 21994 QEplus033719.raw F4 1200.3 846.9 1162.2 1044.8 1178.2 1357.5 352 4.27 1 FALSE 1.14E-05 2.39E-07 1.355 -250 108691 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYEPQEDPGVK [K].sYEPQEDPGVk.[S] N-Term(TMT6plex); K11(TMT6plex) 2 Q93092 Transaldolase OS=Mus musculus OX=10090 GN=Taldo1 PE=1 SV=2 Q93092; A0A1B0GR11 Transaldolase OS=Mus musculus OX=10090 GN=Taldo1 PE=1 SV=2; Transaldolase OS=Mus musculus OX=10090 GN=Taldo1 PE=1 SV=1 0 3 3 0.7634 0 1 1 1 569.63855 1706.9011 1706.90014 0.56 0.00032 0/0 0 0 20751164 HCD 30 MS2 6.993603 1198.3 110 72.3563 22007 22007 22005 QEplus033719.raw F4 1312.6 972.4 1232.2 1100.6 1282.4 1289.3 321 4.48 1 FALSE 1.14E-05 2.42E-05 0.974 -250 108714 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIAAVMQR [K].qIAAVMQR.[R] N-Term(TMT6plex) 1 P05201 "Aspartate aminotransferase, cytoplasmic OS=Mus musculus OX=10090 GN=Got1 PE=1 SV=3" P05201 "Aspartate aminotransferase, cytoplasmic OS=Mus musculus OX=10090 GN=Got1 PE=1 SV=3" 0 2 2 0.4237 0 1 1 1 573.33752 1145.66777 1145.66623 1.35 0.00077 0/0 0 0 28467766 HCD 30 MS2 49.21186 790.7 34.197 72.3631 22010 22010 22005 QEplus033719.raw F4 799.8 590.4 868.8 855.8 686.4 942.7 291 2.36 1 FALSE 1.14E-05 0.0002908 0.768 -250 108740 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYEPQEDPGVK [K].sYEPQEDPGVk.[S] N-Term(TMT6plex); K11(TMT6plex) 2 Q93092 Transaldolase OS=Mus musculus OX=10090 GN=Taldo1 PE=1 SV=2 Q93092; A0A1B0GR11 Transaldolase OS=Mus musculus OX=10090 GN=Taldo1 PE=1 SV=2; Transaldolase OS=Mus musculus OX=10090 GN=Taldo1 PE=1 SV=1 0 2 2 0.6807 0 1 1 1 853.95465 1706.90203 1706.90014 1.11 0.00094 0/0 0 0 14830178 HCD 30 MS2 0 573.1 110 72.3822 22017 22017 22016 QEplus033719.raw F4 593.8 538.2 633.3 527.4 549.2 596.4 312 3.57 1 FALSE 1.14E-05 9.06E-10 1.815 -250 108749 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIQALAIR [K].hIQALAIR.[R] N-Term(TMT6plex) 2 Q9JHR7 Insulin-degrading enzyme OS=Mus musculus OX=10090 GN=Ide PE=1 SV=1 Q9JHR7; Q8CGB9 Insulin-degrading enzyme OS=Mus musculus OX=10090 GN=Ide PE=1 SV=1; Insulin-degrading enzyme OS=Mus musculus OX=10090 GN=Ide PE=1 SV=1 0 3 3 0.4648 0 1 1 1 384.24753 1150.72803 1150.72579 1.95 0.00075 0/0 0 0 10001986 HCD 30 MS2 29.42742 404.4 76.123 72.3844 22018 22018 22016 QEplus033719.raw F4 397.2 330.2 432.7 423.2 406.9 436.1 120 3.55 1 FALSE 1.14E-05 0.0007752 0.684 -250 108767 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIGSGCNLDSAR [R].vIGSGcNLDSAR.[F] N-Term(TMT6plex); C6(Carbamidomethyl) 19 A0A6I8MX27; A0A1B0GSX0 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldhb PE=1 SV=1;L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1 A0A1B0GQX5; P00342; Q64483; A0A6I8MX27; A0A1B0GT41; Q3TI99; D3YZE4; D3YVR7; D3YZQ9; Q3THB4; Q3UDU4; Q99K20; A0A1B0GSR9; D3Z7F0; Q3TCI7; A0A1B0GSX0; A0A0N4SVV8; P16125; P06151 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase C chain OS=Mus musculus OX=10090 GN=Ldhc PE=1 SV=2; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldhc PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldhb PE=1 SV=1; L-lactate dehydrogenase A chain (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldhc PE=1 SV=2; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldhc PE=1 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=2; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldhb PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldhb PE=1 SV=1; L-lactate dehydrogenase B chain OS=Mus musculus OX=10090 GN=Ldhb PE=1 SV=2; L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3 0 3 3 0.5098 0 1 1 1 493.25949 1477.76392 1477.76304 0.59 0.00029 0/0 0 0 41986328 HCD 30 MS2 33.24073 600.1 38.417 72.389 22020 22020 22016 QEplus033719.raw F4 559 495.6 711.5 473.9 613.6 747.2 233 4.57 2 FALSE 1.14E-05 7.54E-06 1.071 -250 108777 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQEMIAR [R].mQEMIAR.[M] N-Term(TMT6plex) 3 P42208 Septin-2 OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=2 G3UYQ0; P42208; E9Q3V6 Septin-2 (Fragment) OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=1; Septin-2 OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=2; Septin-2 OS=Mus musculus OX=10090 GN=Septin2 PE=1 SV=1 0 2 2 0.3593 0 1 1 1 554.29663 1107.58599 1107.5852 0.71 0.00039 0/0 0 0 28840658 HCD 30 MS2 13.75986 970.4 44.305 72.3912 22021 22021 22016 QEplus033719.raw F4 1002.7 850.6 1089.3 760.4 1114.5 1004.9 155 2.31 1 FALSE 0.0009075 0.01245 0.367 -250 108783 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGSYTK [K].lGSYTk.[I] N-Term(TMT6plex); K6(TMT6plex) 5 Q3ULZ3 Phosphoserine aminotransferase OS=Mus musculus OX=10090 GN=Psat1 PE=2 SV=1 Q3U6K9; E9Q6P1; Q3ULZ3; Q543K5; Q8BTJ1 Phosphoserine aminotransferase OS=Mus musculus OX=10090 GN=Psat1 PE=1 SV=1; Phosphohydroxythreonine aminotransferase (Fragment) OS=Mus musculus OX=10090 GN=Psat1 PE=1 SV=1; Phosphoserine aminotransferase OS=Mus musculus OX=10090 GN=Psat1 PE=2 SV=1; Phosphoserine aminotransferase OS=Mus musculus OX=10090 GN=Psat1 PE=1 SV=1; Phosphoserine aminotransferase OS=Mus musculus OX=10090 GN=Psat1 PE=2 SV=1 0 2 2 0.414 0 1 1 1 563.84802 1126.68877 1126.68723 1.36 0.00077 0/0 0 0 16258796 HCD 30 MS2 17.98361 1676.5 110 72.3937 22022 22022 22016 QEplus033719.raw F4 1700.4 1403 1766.7 1430.9 1927.3 1830.6 173 2.15 1 FALSE 0.004816 0.08423 0.05 -250 108793 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEELEEAK [R].tEELEEAk.[K] N-Term(TMT6plex); K8(TMT6plex) 14 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; B2RWX0; B2RQQ1; I6L963; B1AR69; B2RY26; A2AQP0; B2RXX9; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-7B OS=Mus musculus OX=10090 GN=Myh7b PE=3 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.4545 0 1 1 1 703.8927 1406.77812 1406.7779 0.16 0.00011 0/0 0 0 15720655 HCD 30 MS2 5.617124 863.6 110 72.3962 22023 22023 22016 QEplus033719.raw F4 1117.6 195.7 621.2 1669.9 241.2 1335.9 390 3.3 5 FALSE 1.14E-05 0.0002154 0.793 -250 108798 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLAEEDLAQQR [R].qLAEEDLAQQR.[A] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.6298 0 1 1 1 765.41077 1529.81426 1529.8121 1.41 0.00108 0/0 0 0 12361936 HCD 30 MS2 0 567.8 110 72.3988 22024 22024 22016 QEplus033719.raw F4 601.1 471.5 606.2 495 591.8 641.1 289 3.89 2 FALSE 1.14E-05 5.46E-09 1.667 -250 108805 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVTHAQLLEQHR [R].iVTHAQLLEQHR.[G] N-Term(TMT6plex) 7 E9QAI5 Aspartate carbamoyltransferase OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1 B2RQC6-2; E9QAI5; E9QAT6; B2RQC6; G3UWN2; Q6P9L1; Q7TN13 Isoform 2 of CAD protein OS=Mus musculus OX=10090 GN=Cad; Aspartate carbamoyltransferase OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1; CAD protein OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1; CAD protein OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1; CAD protein OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1; Cad protein (Fragment) OS=Mus musculus OX=10090 GN=Cad PE=2 SV=1; Cad protein (Fragment) OS=Mus musculus OX=10090 GN=Cad PE=2 SV=1 0 4 4 0.5907 0 1 1 1 419.24677 1673.96523 1673.96485 0.23 0.00009 0/0 0 0 11302690 HCD 30 MS2 24.01587 344.6 110 72.4013 22025 22025 22016 QEplus033719.raw F4 325.5 264.5 369.6 276.7 396.1 435 455 5.18 1 FALSE 1.14E-05 1.79E-09 1.759 -250 108819 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LMMAQDEER [K].lMMAQDEER.[Q] N-Term(TMT6plex) 2 A0A1W2P7Q6 Exportin-T OS=Mus musculus OX=10090 GN=Xpot PE=1 SV=1 A0A1W2P7Q6; Q9CRT8 Exportin-T OS=Mus musculus OX=10090 GN=Xpot PE=1 SV=1; Exportin-T OS=Mus musculus OX=10090 GN=Xpot PE=1 SV=3 0 2 2 0.6006 0 1 1 1 676.33081 1351.65434 1351.65474 -0.29 -0.0002 0/0 0 0 7280164.5 HCD 30 MS2 9.410076 580.9 110 72.4111 22028 22028 22027 QEplus033719.raw F4 573.9 445.8 618.5 564.9 578.4 703.9 92 3.48 1 FALSE 1.14E-05 6.88E-05 0.888 -250 108825 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDEGLRK [R].lDEGLRk.[E] N-Term(TMT6plex); K7(TMT6plex) 4 Q4JG03 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1 Q4JG03; Q7TMY8-3; Q7TMY8; A2AFQ0 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; Isoform 3 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=5; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=1 1 3 3 0.2642 0 1 1 1 430.271 1288.79844 1288.79891 -0.37 -0.00016 0/0 0 0 10089899 HCD 30 MS2 42.89592 887.4 110 72.4136 22029 22029 22027 QEplus033719.raw F4 925.1 682.1 945.2 734 982.1 1055.7 599 2.46 1 FALSE 0.001473 0.02141 0.27 -250 108842 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPEDWDERPK [R].kPEDWDERPk.[I] N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex) 2 Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 Q3TXE5; Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 0 4 4 0.6149 0 1 1 1 497.53589 1987.12172 1987.12159 0.07 0.00003 0/0 0 0 15105513 HCD 30 MS2 42.28549 1528 89.928 72.4182 22031 22031 22027 QEplus033719.raw F4 1429.3 1100.6 1637.2 1533.8 1430.8 2036.2 424 2.96 1 FALSE 1.14E-05 0.0006135 0.705 -250 108847 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITSGIPQTER [K].iTSGIPQTER.[M] N-Term(TMT6plex) 4 Q9D1J3 SAP domain-containing ribonucleoprotein OS=Mus musculus OX=10090 GN=Sarnp PE=1 SV=3 Q9D1J3; B7ZWI2; A0A1W2P6N2; A0A1W2P7G2 SAP domain-containing ribonucleoprotein OS=Mus musculus OX=10090 GN=Sarnp PE=1 SV=3; 1110005A23Rik protein OS=Mus musculus OX=10090 GN=Sarnp PE=2 SV=1; SAP domain-containing ribonucleoprotein OS=Mus musculus OX=10090 GN=Sarnp PE=1 SV=1; SAP domain-containing ribonucleoprotein OS=Mus musculus OX=10090 GN=Sarnp PE=1 SV=1 0 2 2 0.4561 0 1 1 1 665.88031 1330.75334 1330.7528 0.41 0.00027 0/0 0 0 18483454 HCD 30 MS2 26.26205 861.8 110 72.4207 22032 22032 22027 QEplus033719.raw F4 889.8 765.2 946.7 704.7 947.6 917.1 376 2.96 1 FALSE 1.14E-05 8.25E-07 1.253 -250 108856 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVLCSACSGQGGK [K].nVLcSAcSGQGGk.[S] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl); K13(TMT6plex) 2 Q3TFF0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja2 PE=2 SV=1 Q3TFF0; Q9QYJ0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja2 PE=2 SV=1; DnaJ homolog subfamily A member 2 OS=Mus musculus OX=10090 GN=Dnaja2 PE=1 SV=1 0 3 3 0.7196 0 1 1 1 599.3111 1795.91874 1795.91951 -0.43 -0.00026 0/0 0 0 15473897 HCD 30 MS2 44.20522 933.2 110 72.4232 22033 22033 22027 QEplus033719.raw F4 959.2 792.2 1017.3 835.1 926.5 1068.9 256 5.35 1 FALSE 1.14E-05 4.60E-07 1.301 -250 108862 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QKYEMLCR [R].qkYEMLcR.[G] N-Term(TMT6plex); K2(TMT6plex); C7(Carbamidomethyl) 6 Q60715-2; Q3UF16 Isoform 2 of Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1;Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1 E9Q7B0; Q60715-2; Q3TN84; Q3UF16; Q3TTT2; Q60715 Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=1 SV=1; Isoform 2 of Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha1 PE=2 SV=1; Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus OX=10090 GN=P4ha1 PE=1 SV=2 1 3 3 0.4275 0 1 1 1 529.29114 1585.85886 1585.85948 -0.39 -0.00021 0/0 0 0 13085251 HCD 30 MS2 13.28195 1283 110 72.4257 22034 22034 22027 QEplus033719.raw F4 1194.7 1051.2 1464.8 1377.9 1181.3 1427.8 324 2.76 2 FALSE 0.001591 0.02453 0.247 -250 108872 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDIDIRK [K].cDIDIRk.[D] N-Term(TMT6plex); C1(Carbamidomethyl); K7(TMT6plex) 12 Q3UIJ3; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q3TG92; P63268; Q3UIJ3; Q9CXK3; Q61275; Q3U122; Q61272; P62737; P68134; P68033; Q61852; Q61264 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1" 1 2 2 0.2588 0 1 1 1 689.40009 1377.79289 1377.79244 0.33 0.00023 0/0 0 0 11181499 HCD 30 MS2 8.069617 583.3 110 72.4282 22035 22035 22027 QEplus033719.raw F4 744.2 305.9 647.6 627 415 760.1 495 2.55 3 FALSE 0.00079 0.01093 0.39 -250 108878 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFMRDPIR [K].kFMRDPIR.[I] N-Term(TMT6plex); K1(TMT6plex) 13 Q3UXC2; P10630 RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1;Eukaryotic initiation factor 4A-II OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=2 E9Q561; A0A338P6X5; Q3U8I0; Q3UXC2; P60843; Q3TGK7; Q3TLL6; Q78WR5; P10630-2; Q8BTU6; Q4FZL1; Q3TFG3; P10630 Eukaryotic initiation factor 4A-II OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; Eukaryotic initiation factor 4A-I OS=Mus musculus OX=10090 GN=Eif4a1 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; Isoform 2 of Eukaryotic initiation factor 4A-II OS=Mus musculus OX=10090 GN=Eif4a2; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a1 PE=2 SV=1; Eukaryotic initiation factor 4A-II OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=2 2 4 4 0.2883 0 1 1 1 380.98376 1520.91323 1520.91356 -0.22 -0.00008 0/0 0 0 8268462 HCD 30 MS2 17.14227 637 110 72.4307 22036 22036 22027 QEplus033719.raw F4 527.6 624.4 975.5 412.3 447.2 834.7 442 2.81 2 FALSE 0.002056 0.03654 0.188 -250 108882 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIHLVER [K].vIHLVER.[A] N-Term(TMT6plex) 11 Q9Z1R2 Large proline-rich protein BAG6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1 S4R183; G3UXT8; G3UYZ0; Q3TDL4; A0A1B0GX81; G3V013; Q9Z1R2; G3UZT6; G3UYQ2; Q3UF95; Q8HWH4 Large proline-rich protein BAG6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; Large proline-rich protein BAG6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=8; BCL2-associated athanogene 6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; Large proline-rich protein BAG6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=9; Large proline-rich protein BAG6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 OS=Mus musculus OX=10090 GN=Bag6 PE=1 SV=1; BCL2-associated athanogene 6 (Fragment) OS=Mus musculus OX=10090 GN=Bag6 PE=2 SV=1 0 3 3 0.6721 0 1 1 1 365.5679 1094.68915 1094.68834 0.74 0.00027 0/0 0 0 9120276 HCD 30 MS2 13.80817 392.7 110 72.4332 22037 22037 22027 QEplus033719.raw F4 419.8 315.9 400.5 290.8 479.5 449.9 55 3.05 1 FALSE 0.0002909 0.005939 0.48 -250 108892 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TKPIWTR [K].tkPIWTR.[N] N-Term(TMT6plex); K2(TMT6plex) 9 P07901; Q71LX8 Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4;Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1 Q3TKB9; P07901; Q3TJU7; Q3TKA2; E9Q3D6; Q3UIF3; A0PJ91; Q71LX8; Q3TKG0 HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-alpha OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein HSP 90-beta (Fragment) OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Hsp90aa1 protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1; Heat shock protein 84b OS=Mus musculus OX=10090 GN=Hsp90ab1 PE=1 SV=1; HATPase_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90aa1 PE=2 SV=1 0 3 3 0.3369 0 1 1 1 453.95575 1359.8527 1359.85128 1.04 0.00047 0/0 0 0 61300664 HCD 30 MS2 21.51226 650 15.249 72.4405 22039 22039 22038 QEplus033719.raw F4 552.9 532.4 782.3 506.6 748.9 776.7 332 1.87 2 FALSE 0.005246 0.08939 0.036 -250 108900 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESNGTVMGAELR [K].eSNGTVMGAELR.[H] N-Term(TMT6plex) 3 P09541 Myosin light chain 4 OS=Mus musculus OX=10090 GN=Myl4 PE=1 SV=3 Q9CZ19; A2A6Q8; P09541 Myosin light chain 4 OS=Mus musculus OX=10090 GN=Myl4 PE=1 SV=1; Myosin light chain 4 (Fragment) OS=Mus musculus OX=10090 GN=Myl4 PE=1 SV=8; Myosin light chain 4 OS=Mus musculus OX=10090 GN=Myl4 PE=1 SV=3 0 2 2 0.6821 0 1 1 1 746.88538 1492.76348 1492.76271 0.51 0.00038 0/0 0 0 11393507 HCD 30 MS2 0 409.5 110 72.443 22040 22040 22038 QEplus033719.raw F4 505.6 169.7 421.2 557.1 198.7 604.8 230 4.75 1 FALSE 1.14E-05 2.34E-12 2.307 -250 108911 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLEATK [K].vLEATk.[L] N-Term(TMT6plex); K6(TMT6plex) 8 Q545R0 "Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1" Q61301-2; Q6NV50; E0CXB9; Q3TGQ3; A0A0N4SUZ7; Q61301-3; Q545R0; Q61301 "Isoform 2 of Catenin alpha-2 OS=Mus musculus OX=10090 GN=Ctnna2; Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=2 SV=1; Alpha N-catenin OS=Mus musculus OX=10090 GN=Ctnna2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctnna1 PE=2 SV=1; Alpha N-catenin (Fragment) OS=Mus musculus OX=10090 GN=Ctnna2 PE=1 SV=1; Isoform 3 of Catenin alpha-2 OS=Mus musculus OX=10090 GN=Ctnna2; Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1; Catenin alpha-2 OS=Mus musculus OX=10090 GN=Ctnna2 PE=1 SV=3" 0 2 2 0.2551 0 1 1 1 559.86359 1118.7199 1118.71853 1.22 0.00068 0/0 0 0 23882352 HCD 30 MS2 41.17698 946.8 41.553 72.4475 22042 22042 22038 QEplus033719.raw F4 960.1 733.3 981.5 771.5 1246.4 988.1 209 2.43 1 FALSE 0.00274 0.05414 0.13 -250 108927 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSPTPPSSK [K].lSPTPPSSk.[G] N-Term(TMT6plex); K9(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 2 2 0.5193 0 1 1 1 686.41766 1371.82805 1371.82479 2.38 0.00163 0/0 0 0 17029638 HCD 30 MS2 21.73347 936.8 110 72.4523 22044 22044 22038 QEplus033719.raw F4 945.6 444.5 1000.5 1164.9 624.5 1440.7 291 2.85 1 FALSE 5.44E-05 0.002533 0.575 -250 108937 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEESEEPMETDQNAKEEEK [K].sEESEEPMETDQNAkEEEk.[M] N-Term(TMT6plex); K15(TMT6plex); K19(TMT6plex) 4 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 1 4 4 0.7716 0 1 1 1 732.35773 2926.40908 2926.40785 0.42 0.00031 0/0 0 0 7072585.5 HCD 30 MS2 27.91118 420.9 110 72.4548 22045 22045 22038 QEplus033719.raw F4 432.6 309.7 466.8 363.7 462.6 490.2 164 4.86 1 FALSE 1.14E-05 3.71E-11 2.079 -250 108946 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VETSDEEIK [K].vETSDEEIk.[D] N-Term(TMT6plex); K9(TMT6plex) 5 E9PWK1 Epoxide hydrolase OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=1 D3Z4M3; Q8K2W5; E9PWK1; Q9D379; Q6PEV0 Epoxide hydrolase 1 (Fragment) OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=1; Epoxide hydrolase OS=Mus musculus OX=10090 GN=Ephx1 PE=2 SV=1; Epoxide hydrolase OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=1; Epoxide hydrolase 1 OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=2; Epoxide hydrolase OS=Mus musculus OX=10090 GN=Ephx1 PE=2 SV=1 0 2 2 0.5565 0 1 1 1 754.41583 1507.82439 1507.82557 -0.79 -0.00059 0/0 0 0 9178971 HCD 30 MS2 14.25233 619.7 110 72.4574 22046 22046 22038 QEplus033719.raw F4 562.9 566.4 749.9 514.8 632.9 691.5 374 3.45 1 FALSE 1.14E-05 5.79E-06 1.092 -250 108971 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISCMDK [R].iScMDk.[L] N-Term(TMT6plex); C3(Carbamidomethyl); K6(TMT6plex) 1 Q6PDY2 2-aminoethanethiol dioxygenase OS=Mus musculus OX=10090 GN=Ado PE=1 SV=2 Q6PDY2 2-aminoethanethiol dioxygenase OS=Mus musculus OX=10090 GN=Ado PE=1 SV=2 0 2 2 0.2918 0 1 1 1 606.33093 1211.65459 1211.65284 1.45 0.00088 0/0 0 0 6719342.5 HCD 30 MS2 48.125 1015.7 110 72.4694 22050 22050 22049 QEplus033719.raw F4 953.1 894.7 1082.9 805.1 1311.3 1047 208 2.33 1 FALSE 0.004616 0.08177 0.057 -250 108979 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTEPNETTPLTEPEK [K].hTEPNETTPLTEPEk.[G] N-Term(TMT6plex); K15(TMT6plex) 3 E9QB01; A0A0A6YY47 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2;Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 E9QB01; P13595-2; A0A0A6YY47 Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=2; Isoform 2 of Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1; Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=1 0 3 3 0.7337 0 1 1 1 727.72131 2181.14939 2181.14395 2.49 0.00181 0/0 0 0 4306166.5 HCD 30 MS2 57.52 147.9 110 72.472 22051 22051 22049 QEplus033719.raw F4 147.8 118.4 166.5 117.3 172.6 164.9 394 5.07 2 FALSE 1.14E-05 2.46E-11 2.113 -250 108985 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQLETTER [R].lQLETTER.[Q] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.5742 0 1 1 1 609.84875 1218.69023 1218.68913 0.9 0.00055 0/0 0 0 129470464 HCD 30 MS2 19.32629 754 11.668 72.4742 22052 22052 22049 QEplus033719.raw F4 746.6 676.4 813.4 648.4 801.4 838 366 3.1 2 FALSE 1.14E-05 0.0001884 0.804 -250 108994 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGNDFHTNK [R].lGNDFHTNk.[R] N-Term(TMT6plex); K9(TMT6plex) 3 Q8BT90 40S ribosomal protein S17 (Fragment) OS=Mus musculus OX=10090 GN=Rps17 PE=2 SV=1 Q8BT90; Q5M9L7; Q3TK12 40S ribosomal protein S17 (Fragment) OS=Mus musculus OX=10090 GN=Rps17 PE=2 SV=1; 40S ribosomal protein S17 OS=Mus musculus OX=10090 GN=Rps17 PE=1 SV=1; 40S ribosomal protein S17 OS=Mus musculus OX=10090 GN=Rps17 PE=2 SV=1 0 3 3 0.4902 0 1 1 1 501.94931 1503.83338 1503.832 0.92 0.00046 0/0 0 0 73771736 HCD 30 MS2 41.97741 1096.7 17.326 72.4765 22053 22053 22049 QEplus033719.raw F4 1234.6 635.3 988.3 1473.8 816.8 1431.6 392 3.06 1 FALSE 0.0002518 0.005147 0.498 -250 108997 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQAEAEVASLNRR [R].eQAEAEVASLNRR.[I] N-Term(TMT6plex) 4 Q8C7C3; Q58E70 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1 D3Z6I8; Q8C7C3; Q58E70; E9Q7Q3 Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1 1 3 3 0.0116 0 1 1 1 567.97479 1701.90982 1701.90813 1 0.00057 0/0 0 0 50339844 HCD 30 MS2 2.801194 604.5 36.828 72.4788 22054 22054 22049 QEplus033719.raw F4 588.4 597.1 636.2 447.2 780.6 577.5 330 5.19 2 FALSE 1.14E-05 6.31E-16 2.989 -250 109003 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTDALNATR [R].vTDALNATR.[A] N-Term(TMT6plex) 2 P63038 "60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" P63038-2; P63038 "Isoform 2 of 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1; 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" 0 2 2 0.5567 0 1 1 1 595.341 1189.67473 1189.67382 0.77 0.00046 0/0 0 0 47851240 HCD 30 MS2 48.49553 931.5 21.821 72.481 22055 22055 22049 QEplus033719.raw F4 1034.8 759.4 971.3 862.4 964.4 996.9 403 3 1 FALSE 1.14E-05 2.59E-05 0.969 -250 109013 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DFIRPK [K].dFIRPk.[L] N-Term(TMT6plex); K6(TMT6plex) 10 Q9JLM8 Serine/threonine-protein kinase DCLK1 OS=Mus musculus OX=10090 GN=Dclk1 PE=1 SV=1 Q9JLM8; Q9JLM8-2; Q3UGP0; Q80VB6; Q9JLM7; A0A0G2JGQ6; A3KN70; Q8CHG1; Q8BRN4; Q8VDT3 Serine/threonine-protein kinase DCLK1 OS=Mus musculus OX=10090 GN=Dclk1 PE=1 SV=1; Isoform 2 of Serine/threonine-protein kinase DCLK1 OS=Mus musculus OX=10090 GN=Dclk1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dclk1 PE=2 SV=1; Dclk1 protein OS=Mus musculus OX=10090 GN=Dclk1 PE=1 SV=1; Doublecortin-like protein OS=Mus musculus OX=10090 GN=Dclk1 PE=2 SV=1; Serine/threonine-protein kinase DCLK1 OS=Mus musculus OX=10090 GN=Dclk1 PE=1 SV=1; Dclk1 protein OS=Mus musculus OX=10090 GN=Dclk1 PE=2 SV=1; MKIAA0369 protein (Fragment) OS=Mus musculus OX=10090 GN=Dclk1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Dclk1 PE=2 SV=1; Dclk1 protein OS=Mus musculus OX=10090 GN=Dclk1 PE=2 SV=1 0 3 3 0.1312 0 1 1 1 411.92886 1233.77204 1233.77196 0.06 0.00002 0/0 0 0 45602152 HCD 30 MS2 22.97381 764.7 19.669 72.4833 22056 22056 22049 QEplus033719.raw F4 887.3 285.2 821.7 987.5 454.1 1152.7 378 2.21 1 FALSE 0.00459 0.08122 0.058 -250 109020 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDPTLCR [K].iDPTLcR.[A] N-Term(TMT6plex); C6(Carbamidomethyl) 7 Q3UIJ2 Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1 Q9CRE9; Q3UIJ2; Q3UDF8; Q3U5H6; Q3TML6; Q9D791; Q9Z0N2 "Protein-synthesizing GTPase (Fragment) OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase (Fragment) OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=1 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3y PE=2 SV=1; Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Mus musculus OX=10090 GN=Eif2s3y PE=1 SV=2" 0 2 2 0.2679 0 1 1 1 552.30823 1103.60918 1103.60805 1.03 0.00057 0/0 0 0 44064748 HCD 30 MS2 25.77299 739.9 17.513 72.4855 22057 22057 22049 QEplus033719.raw F4 773.8 545.8 757.8 775.1 705.1 881.6 325 2.09 1 FALSE 0.00192 0.03284 0.203 -250 109028 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MRIEEEIR [R].mRIEEEIR.[V] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.3725 0 1 1 1 435.57831 1304.72037 1304.71939 0.75 0.00033 0/0 0 0 36358840 HCD 30 MS2 47.81032 570.3 24.091 72.4878 22058 22058 22049 QEplus033719.raw F4 522.2 450.1 699.6 530.3 534 685.6 402 3.49 2 FALSE 0.001117 0.01477 0.336 -250 109048 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVSAQIR [K].lVSAQIR.[D] N-Term(TMT6plex) 4 Q3TW74 "C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1" Q8BY49; Q8BXX7; Q3TW74; Q922D8 "Methenyltetrahydrofolate cyclohydrolase (Fragment) OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=2; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=2 SV=1; C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus OX=10090 GN=Mthfd1 PE=1 SV=4" 0 2 2 0.2532 0 1 1 1 508.32837 1015.64946 1015.64615 3.27 0.00166 0/0 0 0 10882349 HCD 30 MS2 60.9603 988.5 54.536 72.4973 22061 22061 22060 QEplus033719.raw F4 873.3 882.8 1179.1 856.2 1037.7 1101.9 87 2.33 1 FALSE 0.002123 0.03952 0.176 -250 109065 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDPTLCR [K].iDPTLcR.[A] N-Term(TMT6plex); C6(Carbamidomethyl) 7 Q3UIJ2 Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1 Q9CRE9; Q3UIJ2; Q3UDF8; Q3U5H6; Q3TML6; Q9D791; Q9Z0N2 "Protein-synthesizing GTPase (Fragment) OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase (Fragment) OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=1 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3y PE=2 SV=1; Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Mus musculus OX=10090 GN=Eif2s3y PE=1 SV=2" 0 2 2 0.1343 0 1 1 1 552.31201 1103.61675 1103.60805 7.88 0.00435 0/0 0 0 56351388 HCD 30 MS2 21.45427 665 14.345 72.5019 22063 22063 22060 QEplus033719.raw F4 698.8 474.8 702.9 687.4 641.1 785 372 2.16 1 FALSE 0.002173 0.04135 0.17 -250 109074 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VMDDLDR [K].vMDDLDR.[A] N-Term(TMT6plex) 6 Q6XMP4 Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1 Q6XMP4; Q8R346; Q8BGQ7; Q6PDM7; Q3TZ32; Q3UD67 "Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=2; Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1" 0 2 2 0.5 0 1 1 1 546.78113 1092.55498 1092.55568 -0.64 -0.00035 0/0 0 0 53721672 HCD 30 MS2 42.39308 808.6 18.036 72.5041 22064 22064 22060 QEplus033719.raw F4 800.8 717 848.1 646.8 978.9 860.3 144 2.78 1 FALSE 0.0003996 0.007067 0.457 -250 109079 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAPSPAPAEPAAPK [K].aAPSPAPAEPAAPk.[S] N-Term(TMT6plex); K14(TMT6plex) 2 A6H663 BCL2-associated athanogene 3 OS=Mus musculus OX=10090 GN=Bag3 PE=2 SV=1 A6H663; Q9JLV1 BCL2-associated athanogene 3 OS=Mus musculus OX=10090 GN=Bag3 PE=2 SV=1; BAG family molecular chaperone regulator 3 OS=Mus musculus OX=10090 GN=Bag3 PE=1 SV=2 0 3 3 0.6299 0 1 1 1 578.33923 1733.00315 1732.99979 1.94 0.00112 0/0 0 0 15143077 HCD 30 MS2 37.528 1045 92.589 72.5109 22067 22067 22060 QEplus033719.raw F4 986.5 751.6 1204.1 1087 906.2 1334.3 443 3.81 1 FALSE 1.14E-05 4.65E-07 1.301 -250 109086 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AFVEAQNK [K].aFVEAQNk.[I] N-Term(TMT6plex); K8(TMT6plex) 3 Q3TCS0 Prolyl endopeptidase OS=Mus musculus OX=10090 GN=Prep PE=2 SV=1 Q3TCS0; Q8C6A3; Q9QUR6 Prolyl endopeptidase OS=Mus musculus OX=10090 GN=Prep PE=2 SV=1; Prolyl endopeptidase OS=Mus musculus OX=10090 GN=Prep PE=2 SV=1; Prolyl endopeptidase OS=Mus musculus OX=10090 GN=Prep PE=1 SV=1 0 2 2 0.5103 0 1 1 1 682.90094 1364.7946 1364.79382 0.57 0.00039 0/0 0 0 13797788 HCD 30 MS2 7.580953 1017.4 110 72.5134 22068 22068 22060 QEplus033719.raw F4 1100.6 896.9 1104.4 850.1 1065 1087.6 456 3.39 1 FALSE 1.14E-05 8.25E-05 0.873 -250 109095 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAECNIVVTQPR [R].aAEcNIVVTQPR.[R] N-Term(TMT6plex); C4(Carbamidomethyl) 6 E9QNN1 DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1 O70133-2; Q3UR42; O70133-3; E9QNN1; A0A087WPL5; O70133 Isoform 2 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; DEAH box protein 9 (Fragment) OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; Isoform 3 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=2 0 2 2 0.6034 0 1 1 1 793.93073 1586.85417 1586.85219 1.25 0.00099 0/0 0 0 12034465 HCD 30 MS2 12.68483 496.7 110 72.5159 22069 22069 22060 QEplus033719.raw F4 492.6 489.6 592.5 419.3 517.5 468.6 329 4.11 1 FALSE 1.14E-05 4.76E-10 1.868 -250 109113 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FNHLVPR [K].fNHLVPR.[L] N-Term(TMT6plex) 2 Q8K2I1 Protein farnesyltransferase subunit beta OS=Mus musculus OX=10090 GN=Fntb PE=1 SV=1 Q8K2I1; D3YWJ4 Protein farnesyltransferase subunit beta OS=Mus musculus OX=10090 GN=Fntb PE=1 SV=1; Protein farnesyltransferase subunit beta OS=Mus musculus OX=10090 GN=Fntb PE=1 SV=1 0 3 3 0.5304 0 1 1 1 371.22446 1111.65882 1111.65738 1.29 0.00048 0/0 0 0 3212936.5 HCD 30 MS2 40.9953 210 110 72.5283 22073 22073 22071 QEplus033719.raw F4 206.2 152.4 198.1 186 245.8 271.6 131 3.13 1 FALSE 0.0002814 0.00559 0.488 -250 109116 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTAQVLIR [K].tTAQVLIR.[F] N-Term(TMT6plex) 3 Q3UDY1 Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1 Q3TCL2; Q3UDY1; Q5U415 "Aldo_ket_red domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1; Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1; Aldo-keto reductase family 1, member B3 (Aldose reductase) OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1" 0 2 2 0.4037 0 1 1 1 565.85846 1130.70964 1130.70947 0.15 0.00008 0/0 0 0 79306376 HCD 30 MS2 9.940195 709.6 13.763 72.5305 22074 22074 22071 QEplus033719.raw F4 744 525.5 777.2 714 613 883.7 241 2.7 1 FALSE 1.14E-05 0.0004195 0.737 -250 109142 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGDQILK [K].kGDQILk.[Q] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 1 3 3 0.4847 0 1 1 1 496.9957 1488.97254 1488.97168 0.58 0.00029 0/0 0 0 19713812 HCD 30 MS2 25.91984 1523.5 93.467 72.5418 22079 22079 22071 QEplus033719.raw F4 1752.9 539.1 1220.9 2771.5 706.4 2150.4 380 2.95 2 FALSE 1.14E-05 0.0004579 0.73 -250 109150 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVVMDK [R].tVVMDk.[S] N-Term(TMT6plex); K6(TMT6plex) 4 D3YXK2; Q80YR5 Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=2;Scaffold attachment factor B2 OS=Mus musculus OX=10090 GN=Safb2 PE=1 SV=2 D3YXK2; F6WIZ2; S4R1M2; Q80YR5 Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=2; Scaffold attachment factor B2 (Fragment) OS=Mus musculus OX=10090 GN=Safb2 PE=1 SV=1; Scaffold attachment factor B1 OS=Mus musculus OX=10090 GN=Safb PE=1 SV=1; Scaffold attachment factor B2 OS=Mus musculus OX=10090 GN=Safb2 PE=1 SV=2 0 2 2 0.4163 0 1 1 1 575.849 1150.69072 1150.6906 0.1 0.00006 0/0 0 0 13806288 HCD 30 MS2 40.00366 1715.7 110 72.5443 22080 22080 22071 QEplus033719.raw F4 1915.8 1440.3 1732.3 1490.4 1935.8 1779.3 217 2.21 2 FALSE 0.003182 0.06269 0.107 -250 109160 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDVADQAQDK [R].vDVADQAQDk.[D] N-Term(TMT6plex); K10(TMT6plex) 7 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q3TDD8; Q8BGD9; B2RWE8; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; Eif4b protein OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 0 2 2 0.635 0 1 1 1 773.9281 1546.84892 1546.84771 0.79 0.00061 0/0 0 0 12496506 HCD 30 MS2 5.564537 538.9 110 72.5469 22081 22081 22071 QEplus033719.raw F4 533 476.9 621.2 461.5 546.7 594.3 400 4.52 1 FALSE 1.14E-05 1.01E-08 1.617 -250 109169 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVSSECQGEMLDYRR [R].qVSSEcQGEMLDYRR.[M] N-Term(TMT6plex); C6(Carbamidomethyl) 2 F8WHM5 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 F8WHM5; Q61543 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 1 3 3 0.8336 0 1 1 1 696.33386 2086.98703 2086.98474 1.1 0.00076 0/0 0 0 5128369.5 HCD 30 MS2 59.20662 434.9 110 72.5567 22084 22084 22082 QEplus033719.raw F4 461.3 323.6 433.6 375.2 501.5 514.3 81 5.35 1 FALSE 1.14E-05 4.00E-15 2.832 -250 109177 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDPTLCR [K].iDPTLcR.[A] N-Term(TMT6plex); C6(Carbamidomethyl) 7 Q3UIJ2 Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1 Q9CRE9; Q3UIJ2; Q3UDF8; Q3U5H6; Q3TML6; Q9D791; Q9Z0N2 "Protein-synthesizing GTPase (Fragment) OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase (Fragment) OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=1 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3y PE=2 SV=1; Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Mus musculus OX=10090 GN=Eif2s3y PE=1 SV=2" 0 2 2 0.2704 0 1 1 1 552.30847 1103.60967 1103.60805 1.47 0.00081 0/0 0 0 58986556 HCD 30 MS2 25.36931 681.2 12.767 72.5589 22085 22085 22082 QEplus033719.raw F4 689.5 473.5 718.5 735.9 601.1 868.4 325 1.96 1 FALSE 0.002249 0.04415 0.16 -250 109183 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LHDALSAK [K].lHDALSAk.[S] N-Term(TMT6plex); K8(TMT6plex) 2 P97807 "Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh PE=1 SV=3" P97807; P97807-2 "Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh PE=1 SV=3; Isoform Cytoplasmic of Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh" 0 3 3 0.4806 0 1 1 1 438.27161 1312.80027 1312.79891 1.04 0.00045 0/0 0 0 50056964 HCD 30 MS2 15.56086 567.2 24.785 72.5612 22086 22086 22082 QEplus033719.raw F4 632.7 392.2 553.3 619.3 502.3 703.2 287 3.87 1 FALSE 4.43E-05 0.001649 0.617 -250 109191 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLAEEDLAQQR [R].qLAEEDLAQQR.[A] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.6928 0 1 1 1 510.60913 1529.81284 1529.8121 0.48 0.00025 0/0 0 0 36669288 HCD 30 MS2 21.44438 636.5 57.338 72.5634 22087 22087 22082 QEplus033719.raw F4 606.8 568.7 686.7 542.7 728.6 685.4 296 4.59 2 FALSE 1.14E-05 2.16E-07 1.364 -250 109198 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEAHSDWVR [K].lEAHSDWVR.[D] N-Term(TMT6plex) 1 Q9D1M0 Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3 Q9D1M0 Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3 0 3 3 0.7042 0 1 1 1 447.90912 1341.7128 1341.71126 1.15 0.00051 0/0 0 0 19913318 HCD 30 MS2 46.18219 753.4 51.877 72.568 22089 22089 22082 QEplus033719.raw F4 806.1 537.1 801.6 510.1 825.7 1040.1 240 4.53 1 FALSE 1.14E-05 1.86E-05 0.996 -250 109203 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IISECSK [K].iISEcSk.[LE] N-Term(TMT6plex); C5(Carbamidomethyl); K7(TMT6plex) 3 Q9CZW5 Mitochondrial import receptor subunit TOM70 OS=Mus musculus OX=10090 GN=Tomm70 PE=1 SV=2 Q9CZW5; Q3TSX8; Q80TT4 Mitochondrial import receptor subunit TOM70 OS=Mus musculus OX=10090 GN=Tomm70 PE=1 SV=2; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Tomm70a PE=2 SV=1; MKIAA0719 protein (Fragment) OS=Mus musculus OX=10090 GN=Tomm70a PE=2 SV=1 0 2 2 0.3838 0 1 1 1 647.87543 1294.74358 1294.74409 -0.4 -0.00026 0/0 0 0 18484140 HCD 30 MS2 30.51285 1382.7 110 72.5705 22090 22090 22082 QEplus033719.raw F4 1355.8 1113 1479 1247.5 1386.7 1714 443 2.84 1 FALSE 0.0002814 0.005725 0.485 -250 109204 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILSECSK [K].iLSEcSk.[LE] N-Term(TMT6plex); C5(Carbamidomethyl); K7(TMT6plex) 3 A0A087WQ11; Q9Z0Z3; Q9Z0Z3-2 S-phase kinase-associated protein 2 OS=Mus musculus OX=10090 GN=Skp2 PE=1 SV=1; S-phase kinase-associated protein 2 OS=Mus musculus OX=10090 GN=Skp2 PE=1 SV=1; Isoform 2 of S-phase kinase-associated protein 2 OS=Mus musculus OX=10090 GN=Skp2 0 2 2 0.3838 0 1 2 2 647.87543 1294.74358 1294.74409 -0.4 -0.00026 0/0 0 0 18484140 HCD 30 MS2 30.51285 1382.7 110 72.5705 22090 22090 22082 QEplus033719.raw F4 1355.8 1113 1479 1247.5 1386.7 1714 443 2.84 1 FALSE 0.0002814 0.005725 0.485 -250 109223 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLNEWDSR [K].tLNEWDSR.[H] N-Term(TMT6plex) 1 O70194 Eukaryotic translation initiation factor 3 subunit D OS=Mus musculus OX=10090 GN=Eif3d PE=1 SV=2 O70194 Eukaryotic translation initiation factor 3 subunit D OS=Mus musculus OX=10090 GN=Eif3d PE=1 SV=2 0 2 2 0.3152 0 1 1 1 625.32275 1249.63823 1249.63743 0.64 0.0004 0/0 0 0 11022895 HCD 30 MS2 30.92477 1001.7 110 72.5755 22092 22092 22082 QEplus033719.raw F4 1051.9 797.8 1046.6 956.6 1058.4 1098.8 182 2.76 1 FALSE 3.35E-05 0.001312 0.638 -250 109229 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVEVGSK [K].vVEVGSk.[I] N-Term(TMT6plex); K7(TMT6plex) 6 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480; A0A1L1SU37; A0A1L1SSN6; A0A1L1SQV8; P52480-2; A0A1L1STV8 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1 0 2 2 0.2852 0 1 1 1 588.37433 1175.74138 1175.73999 1.18 0.00069 0/0 0 0 629730368 HCD 30 MS2 9.187676 782.8 2.222 72.5828 22094 22094 22093 QEplus033719.raw F4 858.4 663.9 726.7 719.5 1002.5 726 440 2.77 2 FALSE 0.001152 0.01544 0.327 -250 109238 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LMEECK [K].lMEEck.[R] N-Term(TMT6plex); C5(Carbamidomethyl); K6(TMT6plex) 2 Q9WV55 Vesicle-associated membrane protein-associated protein A OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=2 Q9WV55; A0A3B2W837 Vesicle-associated membrane protein-associated protein A OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=2; Vesicle-associated membrane protein-associated protein A (Fragment) OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=1 0 2 2 0.5708 0 1 1 1 634.34338 1267.67949 1267.67905 0.35 0.00022 0/0 0 0 59293076 HCD 30 MS2 10.15753 1148.8 28.532 72.5851 22095 22095 22093 QEplus033719.raw F4 1074 818.9 1256.5 1132.9 1151.6 1458.7 205 2.33 1 FALSE 0.006745 0.1071 -0.013 -250 109245 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSFFGDR [K].sSFFGDR.[G] N-Term(TMT6plex) 3 B9EKE9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1 B9EKE9; B7ZWF1; Q3TQX5 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=1 0 2 2 0.4623 0 1 1 1 522.77008 1044.53288 1044.53118 1.64 0.00085 0/0 0 0 53680672 HCD 30 MS2 63.23387 1034.3 13.993 72.5873 22096 22096 22093 QEplus033719.raw F4 1005.8 788.7 1113.1 963.8 1181.3 1153.3 53 2.12 1 FALSE 0.00219 0.04241 0.166 -250 109269 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVLCSACSGQGGK [K].nVLcSAcSGQGGk.[S] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl); K13(TMT6plex) 2 Q3TFF0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja2 PE=2 SV=1 Q3TFF0; Q9QYJ0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnaja2 PE=2 SV=1; DnaJ homolog subfamily A member 2 OS=Mus musculus OX=10090 GN=Dnaja2 PE=1 SV=1 0 2 2 0.8438 0 1 1 1 898.46332 1795.91936 1795.91951 -0.08 -0.00008 0/0 0 0 8229283.5 HCD 30 MS2 0 570.1 110 72.5944 22099 22099 22093 QEplus033719.raw F4 578.1 433.9 636.3 521.7 576.3 674.2 255 5.25 1 FALSE 1.14E-05 1.34E-13 2.543 -250 109274 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AELANIER [K].aELANIER.[E] N-Term(TMT6plex) 3 A2RRK3 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Slk PE=2 SV=1 A0A5F8MPV2; A2RRK3; O54988 STE20-like serine/threonine-protein kinase (Fragment) OS=Mus musculus OX=10090 GN=Slk PE=1 SV=1; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Slk PE=2 SV=1; STE20-like serine/threonine-protein kinase OS=Mus musculus OX=10090 GN=Slk PE=1 SV=2 0 2 2 0.2364 0 1 1 1 572.82959 1144.6519 1144.65235 -0.39 -0.00022 0/0 0 0 5111928.5 HCD 30 MS2 13.86784 887.4 110 72.5969 22100 22100 22093 QEplus033719.raw F4 902.4 758.7 940.8 796.3 958.7 967.6 286 2.58 1 FALSE 2.26E-05 0.001027 0.66 -250 109283 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAPSPAPAEPAAPK [K].aAPSPAPAEPAAPk.[S] N-Term(TMT6plex); K14(TMT6plex) 2 A6H663 BCL2-associated athanogene 3 OS=Mus musculus OX=10090 GN=Bag3 PE=2 SV=1 A6H663; Q9JLV1 BCL2-associated athanogene 3 OS=Mus musculus OX=10090 GN=Bag3 PE=2 SV=1; BAG family molecular chaperone regulator 3 OS=Mus musculus OX=10090 GN=Bag3 PE=1 SV=2 0 2 2 0.6051 0 1 1 1 867.0033 1732.99932 1732.99979 -0.27 -0.00024 0/0 0 0 4295078 HCD 30 MS2 0 193.5 110 72.5994 22101 22101 22093 QEplus033719.raw F4 194.4 160.5 214.2 165.8 195.4 230.8 484 5.09 1 FALSE 1.14E-05 3.40E-11 2.086 -250 109292 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEELEEAK [R].tEELEEAk.[K] N-Term(TMT6plex); K8(TMT6plex) 14 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; B2RWX0; B2RQQ1; I6L963; B1AR69; B2RY26; A2AQP0; B2RXX9; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-7B OS=Mus musculus OX=10090 GN=Myh7b PE=3 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 3 3 0.3125 0 1 1 1 469.59805 1406.77961 1406.7779 1.22 0.00057 0/0 0 0 62055384 HCD 30 MS2 33.59541 691.2 15.346 72.6039 22103 22103 22093 QEplus033719.raw F4 735.5 350 598.6 1032 536 895.2 410 3.2 5 FALSE 0.0006216 0.009243 0.417 -250 109296 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTQGILK [R].nTQGILk.[D] N-Term(TMT6plex); K7(TMT6plex) 7 Q5SX40; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q9ESW6; B2RWW8; Q5SX40; G3UW82; B2RWX0; Q3TT35; P13542 "Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.0397 0 1 1 1 616.39264 1231.778 1231.77744 0.45 0.00028 0/0 0 0 90704576 HCD 30 MS2 21.43765 1068.6 19.937 72.6112 22105 22105 22104 QEplus033719.raw F4 1221.8 196.3 596.4 2332 269.6 1795.6 531 2.77 2 FALSE 0.001778 0.03038 0.215 -250 109303 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESNPLTAQQTTK [R].eSNPLTAQQTTk.[L] N-Term(TMT6plex); K12(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.7699 0 1 1 1 592.66833 1775.99045 1775.99035 0.06 0.00003 0/0 0 0 42684632 HCD 30 MS2 14.92368 469.9 33.592 72.6135 22106 22106 22104 QEplus033719.raw F4 456.2 337.4 476.2 555.3 352.6 641.9 413 4.91 3 FALSE 1.14E-05 2.37E-08 1.546 -250 109311 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGDLMAYDR [R].gGDLMAYDR.[R] N-Term(TMT6plex) 12 Q5FWJ5 Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 P61979-3; Q3U9Q3; Q3TUA1; Q5FWJ5; P61979; H3BLL4; B2M1R6; Q3TG17; Q3U6X2; H3BLP7; Q3TL71; Q3TJ38 Isoform 3 of Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 0 2 2 0.5321 0 1 1 1 613.80585 1226.60442 1226.60369 0.59 0.00036 0/0 0 0 34781072 HCD 30 MS2 35.67154 838.3 36.01 72.6203 22109 22109 22104 QEplus033719.raw F4 818.1 784.9 929.1 682 994.8 821.1 82 3.27 1 FALSE 1.14E-05 2.50E-06 1.162 -250 109327 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQAEEAEEQSNVNLAK [K].rQAEEAEEQSNVNLAk.[F] N-Term(TMT6plex); K16(TMT6plex) 7 Q5SX40; Q5SX39 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1 Q56A77; Q9ESW6; Q5SX40; Q5SX39; B2RWX0; Q3TT35; Q9JHR4 "Myh4 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin heavy chain IIB (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1" 1 3 3 0.8041 0 1 1 1 758.74176 2274.21073 2274.20901 0.76 0.00057 0/0 0 0 21631668 HCD 30 MS2 2.863327 451.5 110 72.6251 22111 22111 22104 QEplus033719.raw F4 590.1 62.9 193.4 1102.9 82 678 410 7.76 2 FALSE 1.14E-05 6.31E-16 3.378 -250 109334 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FHSLKPK [K].fHSLkPk.[L] N-Term(TMT6plex); K5(TMT6plex); K7(TMT6plex) 7 Q1MWP9; Q8BH64 EH-domain containing 4 (Fragment) OS=Mus musculus OX=10090 GN=Ehd4 PE=2 SV=1;EH domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ehd2 PE=1 SV=1 Q1MWP8; Q1MWP9; Q8R2X0; Q91VL7; Q3TWP9; Q3TM70; Q8BH64 EH-domain containing 4-KJR (Fragment) OS=Mus musculus OX=10090 GN=Ehd4 PE=2 SV=1; EH-domain containing 4 (Fragment) OS=Mus musculus OX=10090 GN=Ehd4 PE=2 SV=1; Ehd2 protein OS=Mus musculus OX=10090 GN=Ehd2 PE=2 SV=1; EH-domain containing 4 OS=Mus musculus OX=10090 GN=Ehd4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ehd4 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ehd4 PE=1 SV=1; EH domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ehd2 PE=1 SV=1 0 4 4 0.3333 0 1 1 1 386.75381 1543.99343 1543.99274 0.44 0.00017 0/0 0 0 23835662 HCD 30 MS2 19.71651 590.1 45.516 72.6273 22112 22112 22104 QEplus033719.raw F4 580.5 551.2 667.9 492.8 561.9 686.5 163 3.27 2 FALSE 0.001117 0.01475 0.336 -250 109357 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVQAAMEK [K].sVQAAMEk.[R] N-Term(TMT6plex); K8(TMT6plex) 2 O35459 "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Mus musculus OX=10090 GN=Ech1 PE=1 SV=1" O35459; F7B227 "Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Mus musculus OX=10090 GN=Ech1 PE=1 SV=1; Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Ech1 PE=1 SV=1" 0 2 2 0.492 0 1 1 1 661.37885 1321.75041 1321.75499 -3.46 -0.00229 0/0 0 0 14728966 HCD 30 MS2 10.69603 942.2 110 72.6391 22116 22116 22115 QEplus033719.raw F4 824.9 962.6 1126.5 836 870.6 1032.4 410 2.5 1 FALSE 1.14E-05 0.000823 0.679 -250 109385 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DEFTNTCPSDK [R].dEFTNTcPSDk.[E] N-Term(TMT6plex); C7(Carbamidomethyl); K11(TMT6plex) 2 Q9QYB1 Chloride intracellular channel protein 4 OS=Mus musculus OX=10090 GN=Clic4 PE=1 SV=3 Q3U8I1; Q9QYB1 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Clic4 PE=2 SV=1; Chloride intracellular channel protein 4 OS=Mus musculus OX=10090 GN=Clic4 PE=1 SV=3 0 2 2 0.7416 0 1 1 1 886.43311 1771.85893 1771.85729 0.93 0.00082 0/0 0 0 15715850 HCD 30 MS2 0 616.3 110 72.6487 22120 22120 22115 QEplus033719.raw F4 651.4 511.3 670.3 523.6 688.8 652.5 117 3.87 1 FALSE 1.14E-05 9.25E-09 1.624 -250 109391 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DITSDTSGDFR [K].dITSDTSGDFR.[K] N-Term(TMT6plex) 6 B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 Q4FK88; Q3US43; Q4FJV4; Q3U5N9; A0A494BBD8; B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 0 2 2 0.7664 0 1 1 1 721.85126 1442.69524 1442.69607 -0.58 -0.00042 0/0 0 0 13229399 HCD 30 MS2 0 489 110 72.6512 22121 22121 22115 QEplus033719.raw F4 462 559.9 570.9 352.2 506.7 482.2 69 4.11 1 FALSE 1.14E-05 1.92E-08 1.563 -250 109399 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGNDFHTNK [R].lGNDFHTNk.[R] N-Term(TMT6plex); K9(TMT6plex) 3 Q8BT90 40S ribosomal protein S17 (Fragment) OS=Mus musculus OX=10090 GN=Rps17 PE=2 SV=1 Q8BT90; Q5M9L7; Q3TK12 40S ribosomal protein S17 (Fragment) OS=Mus musculus OX=10090 GN=Rps17 PE=2 SV=1; 40S ribosomal protein S17 OS=Mus musculus OX=10090 GN=Rps17 PE=1 SV=1; 40S ribosomal protein S17 OS=Mus musculus OX=10090 GN=Rps17 PE=2 SV=1 0 2 2 0.6709 0 1 1 1 752.42102 1503.83476 1503.832 1.84 0.00138 0/0 0 0 12507257 HCD 30 MS2 7.305869 738.9 110 72.6537 22122 22122 22115 QEplus033719.raw F4 773.7 597.8 825.9 637.2 747 851.5 395 3.92 1 FALSE 1.14E-05 1.23E-06 1.221 -250 109420 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STTTGHLIYK [K].sTTTGHLIYk.[C] N-Term(TMT6plex); K10(TMT6plex) 7 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; P62631; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Mus musculus OX=10090 GN=Eef1a2 PE=1 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 0 2 2 0.5867 0 1 1 1 789.96765 1578.92803 1578.92556 1.56 0.00123 0/0 0 0 6567903 HCD 30 MS2 22.8397 587.9 110 72.6612 22125 22125 22115 QEplus033719.raw F4 677.6 516 525.6 718.6 787.5 302.2 416 4.21 1 FALSE 1.14E-05 2.60E-08 1.538 -250 109426 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RALANSLACQGK [K].rALANSLAcQGk.[Y] N-Term(TMT6plex); C9(Carbamidomethyl); K12(TMT6plex) 5 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 Q9CPQ9; A6ZI46; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 1 3 3 0.6702 0 1 1 1 583.00665 1747.00541 1747.00489 0.29 0.00017 0/0 0 0 17239176 HCD 30 MS2 31.58715 816.3 68.826 72.6685 22127 22127 22126 QEplus033719.raw F4 861.6 582.8 853.6 836.7 743.1 1020.2 466 4.76 1 FALSE 1.14E-05 2.19E-13 2.502 -250 109433 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QKPITPETAEK [K].qkPITPETAEk.[L] N-Term(TMT6plex); K2(TMT6plex); K11(TMT6plex) 3 P60766 Cell division control protein 42 homolog OS=Mus musculus OX=10090 GN=Cdc42 PE=1 SV=2 P60766; P60766-1; Q3UL78 Cell division control protein 42 homolog OS=Mus musculus OX=10090 GN=Cdc42 PE=1 SV=2; Isoform 1 of Cell division control protein 42 homolog OS=Mus musculus OX=10090 GN=Cdc42; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cdc42 PE=2 SV=1 0 4 4 0.646 0 1 1 1 483.04639 1929.16372 1929.16239 0.69 0.00033 0/0 0 0 21374592 HCD 30 MS2 21.88467 966.3 79.837 72.6708 22128 22128 22126 QEplus033719.raw F4 925.8 866.6 1086.9 816.3 1032.7 1069.5 279 4.04 1 FALSE 0.0006216 0.009247 0.417 -250 109441 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQSEPESIRK [R].lQSEPESIRk.[W] N-Term(TMT6plex); K10(TMT6plex) 6 Q6PFA2 Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1 Q6PFA2; O08585; B1AWD9; B1AWD8; B1AWE0; B1AWE1 Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain A OS=Mus musculus OX=10090 GN=Clta PE=1 SV=2; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1 1 3 3 0.4562 0 1 1 1 548.99451 1644.96897 1644.96849 0.29 0.00016 0/0 0 0 37758816 HCD 30 MS2 8.113338 971.9 44.184 72.673 22129 22129 22126 QEplus033719.raw F4 1031.6 895.8 1114.2 807.2 1002.4 980 422 3.77 1 FALSE 1.14E-05 2.37E-06 1.166 -250 109450 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HAACPVLVGCK [R].hAAcPVLVGck.[W] N-Term(TMT6plex); C4(Carbamidomethyl); C10(Carbamidomethyl); K11(TMT6plex) 4 Q5SX75 Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha2 PE=1 SV=1 Q5SX75; Q3UQ81; Q60716; Q5SX74 Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha2 PE=1 SV=1; Fe2OG dioxygenase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=P4ha2 PE=2 SV=1; Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus OX=10090 GN=P4ha2 PE=1 SV=1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha2 PE=2 SV=1 0 3 3 0.69 0 1 1 1 557.31372 1669.92661 1669.92822 -0.97 -0.00054 0/0 0 0 14614291 HCD 30 MS2 18.52881 850.3 105.144 72.6755 22130 22130 22126 QEplus033719.raw F4 924.3 675.2 775.2 721.5 1185.2 820.6 352 4.71 1 FALSE 1.14E-05 1.19E-10 1.983 -250 109457 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQDLFR [K].tQDLFR.[R] N-Term(TMT6plex) 15 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 Q3UZD9; Q6NZJ6-2; A0PJB5; A0A0J9YVC1; E9Q9E1; Q3UQI5; Q3UYM6; E9Q770; E9PVC5; E9PVC6; A0A0J9YUS5; A0A0J9YUC1; Q6EVH9; Q6NZJ6; Q3UTK0 MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; eIF4GI protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 0 2 2 0.2094 0 1 1 1 504.78726 1008.56725 1008.56756 -0.31 -0.00016 0/0 0 0 12515454 HCD 30 MS2 34.00331 1163.2 110 72.678 22131 22131 22126 QEplus033719.raw F4 1217.8 915.4 1269.6 1026.7 1239.4 1310.2 166 1.91 1 FALSE 0.003742 0.0712 0.085 -250 109478 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YALIQHQK [R].yALIQHQk.[S] N-Term(TMT6plex); K8(TMT6plex) 3 Q3UYZ8 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ctcf PE=2 SV=1 Q3UYZ8; Q3USR8; Q61164 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ctcf PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ctcf PE=2 SV=1; Transcriptional repressor CTCF OS=Mus musculus OX=10090 GN=Ctcf PE=1 SV=2 0 3 3 0.5136 0 1 1 1 486.966 1458.88346 1458.88331 0.1 0.00005 0/0 0 0 7043779 HCD 30 MS2 0 750.1 110 72.6855 22134 22134 22126 QEplus033719.raw F4 844.6 555 740.4 622.7 958.5 779.5 434 3.31 1 FALSE 0.0001813 0.003983 0.528 -250 109495 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATVASDQIEMNR [K].aTVASDQIEMNR.[L] N-Term(TMT6plex) 4 A0A0R4J0J8 Cytospin-A OS=Mus musculus OX=10090 GN=Specc1l PE=1 SV=1 A0A0R4J0J8; Q8C9Q9; Q2KN98; Q6GQV8 Cytospin-A OS=Mus musculus OX=10090 GN=Specc1l PE=1 SV=1; Cytospin-A (Fragment) OS=Mus musculus OX=10090 GN=Specc1l PE=2 SV=1; Cytospin-A OS=Mus musculus OX=10090 GN=Specc1l PE=1 SV=1; Cytospin-A OS=Mus musculus OX=10090 GN=Specc1l PE=2 SV=1 0 2 2 0.739 0 1 1 1 782.40167 1563.79607 1563.79982 -2.4 -0.00188 0/0 0 0 4215195 HCD 30 MS2 34.25857 261.4 110 72.6905 22136 22136 22126 QEplus033719.raw F4 237.7 246.5 304.8 212.9 292.6 273.9 230 4.33 1 FALSE 1.14E-05 5.01E-10 1.864 -250 109505 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIGSGCNLDSAR [R].vIGSGcNLDSAR.[F] N-Term(TMT6plex); C6(Carbamidomethyl) 19 A0A6I8MX27; A0A1B0GSX0 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldhb PE=1 SV=1;L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1 A0A1B0GQX5; P00342; Q64483; A0A6I8MX27; A0A1B0GT41; Q3TI99; D3YZE4; D3YVR7; D3YZQ9; Q3THB4; Q3UDU4; Q99K20; A0A1B0GSR9; D3Z7F0; Q3TCI7; A0A1B0GSX0; A0A0N4SVV8; P16125; P06151 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase C chain OS=Mus musculus OX=10090 GN=Ldhc PE=1 SV=2; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldhc PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldhb PE=1 SV=1; L-lactate dehydrogenase A chain (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldhc PE=1 SV=2; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldhc PE=1 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=2; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldhb PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldhb PE=1 SV=1; L-lactate dehydrogenase B chain OS=Mus musculus OX=10090 GN=Ldhb PE=1 SV=2; L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3 0 2 2 0.6353 0 1 1 1 739.38538 1477.76348 1477.76304 0.29 0.00022 0/0 0 0 83289632 HCD 30 MS2 3.055237 397.3 19.335 72.6978 22138 22138 22137 QEplus033719.raw F4 396.4 289.3 384.4 419 438.1 456.9 225 4.47 2 FALSE 1.14E-05 2.20E-10 1.932 -250 109522 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STTTGHLIYK [K].sTTTGHLIYk.[C] N-Term(TMT6plex); K10(TMT6plex) 7 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; P62631; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Mus musculus OX=10090 GN=Eef1a2 PE=1 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 0 3 3 0.6136 0 1 1 1 526.98022 1578.92612 1578.92556 0.35 0.00019 0/0 0 0 292445088 HCD 30 MS2 21.58206 1047.9 6.149 72.7026 22140 22140 22137 QEplus033719.raw F4 1193.4 832.3 930.1 1174.6 1406.7 750.6 426 3.08 1 FALSE 1.14E-05 8.44E-05 0.871 -250 109526 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DEFTNTCPSDK [R].dEFTNTcPSDk.[E] N-Term(TMT6plex); C7(Carbamidomethyl); K11(TMT6plex) 2 Q9QYB1 Chloride intracellular channel protein 4 OS=Mus musculus OX=10090 GN=Clic4 PE=1 SV=3 Q3U8I1; Q9QYB1 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Clic4 PE=2 SV=1; Chloride intracellular channel protein 4 OS=Mus musculus OX=10090 GN=Clic4 PE=1 SV=3 0 3 3 0.7437 0 1 1 1 591.29034 1771.85648 1771.85729 -0.46 -0.00027 0/0 0 0 27770330 HCD 30 MS2 26.81207 809.3 58.549 72.7071 22142 22142 22137 QEplus033719.raw F4 841 636.8 891.8 668.6 904.7 912.7 110 3.94 1 FALSE 1.14E-05 2.36E-05 0.977 -250 109536 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAGMQLQGYR [R].dAGMQLQGYR.[Y] N-Term(TMT6plex) 1 P05202 "Aspartate aminotransferase, mitochondrial OS=Mus musculus OX=10090 GN=Got2 PE=1 SV=1" P05202 "Aspartate aminotransferase, mitochondrial OS=Mus musculus OX=10090 GN=Got2 PE=1 SV=1" 0 2 2 0.6948 0 1 1 1 684.35016 1367.69304 1367.6939 -0.63 -0.00043 0/0 0 0 21222804 HCD 30 MS2 32.01999 1182.3 110 72.7119 22144 22144 22137 QEplus033719.raw F4 1241 993.9 1309.5 1205.3 1119.8 1224 182 3.67 1 FALSE 1.14E-05 1.13E-06 1.227 -250 109544 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LNQMDQDK [K].lNQMDQDk.[V] N-Term(TMT6plex); K8(TMT6plex) 3 Q3UK39 DNA replication licensing factor MCM2 OS=Mus musculus OX=10090 GN=Mcm2 PE=2 SV=1 Q3UK39; P97310; Q3UJN1 DNA replication licensing factor MCM2 OS=Mus musculus OX=10090 GN=Mcm2 PE=2 SV=1; DNA replication licensing factor MCM2 OS=Mus musculus OX=10090 GN=Mcm2 PE=1 SV=3; DNA replication licensing factor MCM2 OS=Mus musculus OX=10090 GN=Mcm2 PE=2 SV=1 0 2 2 0.4695 0 1 1 1 725.39111 1449.77495 1449.77718 -1.54 -0.00112 0/0 0 0 10387671 HCD 30 MS2 0 637 110 72.7144 22145 22145 22137 QEplus033719.raw F4 613.6 738.1 560 347.5 1049.7 512.9 313 3.28 1 FALSE 1.14E-05 0.0001882 0.804 -250 109561 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESNPLTAQQTTK [R].eSNPLTAQQTTk.[L] N-Term(TMT6plex); K12(TMT6plex) 13 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCL7; Q3TCF1; A0A087WS56; P11276; Q3TBB4; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.69 0 1 1 1 888.49939 1775.9915 1775.99035 0.65 0.00058 0/0 0 0 3102593.5 HCD 30 MS2 15.93828 337.8 110 72.7267 22149 22149 22148 QEplus033719.raw F4 361.6 247.6 335.8 365.1 311.4 405.3 416 3.71 3 FALSE 1.14E-05 4.06E-11 2.071 -250 109576 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDETDASSAVK [K].mDETDASSAVk.[V] N-Term(TMT6plex); K11(TMT6plex) 12 Q8BUM1 TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1 Q8R0B4; Q8BUM1; C9DT14; A0A087WR97; D2KPZ5; Q6VYI5; A0A087WSE4; A0A087WRZ5; Q544R5; Q8BLD4; Q6VYI4; Q05C33 TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1; TAR DNA-binding protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1 0 2 2 0.773 0 1 1 1 806.41943 1611.83159 1611.83001 0.98 0.00079 0/0 0 0 9672897 HCD 30 MS2 0 475.8 110 72.7315 22151 22151 22148 QEplus033719.raw F4 519.9 452.5 503.1 343.9 542.1 493 245 4.89 1 FALSE 1.14E-05 2.58E-10 1.919 -250 109599 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEKPAVAAAPKK [R].eEkPAVAAAPkk.[-] N-Term(TMT6plex); K3(TMT6plex); K11(TMT6plex); K12(TMT6plex) 1 Q52L78 Alpha(B)-crystallin OS=Mus musculus OX=10090 GN=Cryab PE=1 SV=1 Q52L78 Alpha(B)-crystallin OS=Mus musculus OX=10090 GN=Cryab PE=1 SV=1 1 4 4 0.591 0 1 1 1 539.59625 2155.36318 2155.36204 0.53 0.00028 0/0 0 0 4958167 HCD 30 MS2 33.74305 906.8 110 72.7391 22154 22154 22148 QEplus033719.raw F4 1036.7 526.6 1078.4 1017.3 711 1071 72 4.01 1 FALSE 1.14E-05 8.71E-07 1.249 -250 109606 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MITETEK [R].mITETEk.[F] N-Term(TMT6plex); K7(TMT6plex) 1 Q6P9Q4 FH1/FH2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Fhod1 PE=1 SV=3 Q6P9Q4 FH1/FH2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Fhod1 PE=1 SV=3 0 2 2 0.4115 0 1 1 1 655.37555 1309.74382 1309.74376 0.05 0.00003 0/0 0 0 9066975 HCD 30 MS2 33.33537 1180.6 110 72.7416 22155 22155 22148 QEplus033719.raw F4 1217.2 1078.2 1350.6 914.4 1318 1205.2 382 2.09 1 FALSE 0.0009447 0.01289 0.361 -250 109614 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTGYPQPK [R].vTGYPQPk.[V] N-Term(TMT6plex); K8(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.4365 0 1 1 1 674.40515 1347.80303 1347.80366 -0.47 -0.00032 0/0 0 0 8607460 HCD 30 MS2 52.88747 738 110 72.7441 22156 22156 22148 QEplus033719.raw F4 770.2 437.4 729.9 967 547.3 976.4 453 2.52 2 FALSE 4.43E-05 0.001664 0.616 -250 109623 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANALNVSNK [R].aNALNVSNk.[L] N-Term(TMT6plex); K9(TMT6plex) 5 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; A0A571BF46; A2AQB2; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 2 2 0.3195 0 1 1 1 694.91547 1388.82366 1388.82618 -1.82 -0.00126 0/0 0 0 6539471 HCD 30 MS2 35.53603 636.1 110 72.7466 22157 22157 22148 QEplus033719.raw F4 691.3 338.6 596.9 793.7 447.1 949.1 489 2.41 1 FALSE 1.14E-05 1.68E-05 1.004 -250 109636 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATSPSTLVSTGPSSR [K].aTSPSTLVSTGPSSR.[S] N-Term(TMT6plex) 10 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; A0A0G2JFT4; A0A0G2JG35; A0A140T8T5; P27546-3; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 2 2 0.7511 0 1 1 1 838.9574 1676.90752 1676.90164 3.5 0.00294 0/0 0 0 9248534 HCD 30 MS2 0 314.7 110 72.7565 22160 22160 22159 QEplus033719.raw F4 314.2 284.4 349.7 262.3 352.7 325 416 4.46 2 FALSE 1.14E-05 4.92E-12 2.245 -250 109650 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVLFHSGGK [R].gVLFHSGGk.[F] N-Term(TMT6plex); K9(TMT6plex) 5 Q5SW18 Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1 Q3TIK0; Q5SW18; Q3UH92; P63005-2; Q3TJG1 Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1; Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1; Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1; Isoform 2 of Platelet-activating factor acetylhydrolase IB subunit beta OS=Mus musculus OX=10090 GN=Pafah1b1; Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus OX=10090 GN=Pafah1b1 PE=2 SV=1 0 3 3 0.4744 0 1 1 1 453.94321 1359.81507 1359.81489 0.13 0.00006 0/0 0 0 34671872 HCD 30 MS2 25.33554 697.6 37.267 72.7612 22162 22162 22159 QEplus033719.raw F4 725.3 578.8 785.8 562.3 790.4 743 419 3.52 1 FALSE 1.14E-05 0.0004145 0.738 -250 109668 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LHDALSAK [K].lHDALSAk.[S] N-Term(TMT6plex); K8(TMT6plex) 2 P97807 "Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh PE=1 SV=3" P97807; P97807-2 "Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh PE=1 SV=3; Isoform Cytoplasmic of Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh" 0 2 2 0.2989 0 1 1 1 656.90424 1312.8012 1312.79891 1.74 0.00114 0/0 0 0 5146866 HCD 30 MS2 0 662.9 110 72.7663 22164 22164 22159 QEplus033719.raw F4 634.2 532.1 729 714.1 679.9 688 296 2.71 1 FALSE 1.14E-05 0.0003842 0.745 -250 109678 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MGPGAASGGERPNLK [R].mGPGAASGGERPNLk.[I] N-Term(TMT6plex); K15(TMT6plex) 4 Q9D1G1 Ras-related protein Rab-1B OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1 Q9D1G1; A0A494B945; Q3V3C2; A0A494BA38 Ras-related protein Rab-1B OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1; Ras-related protein Rab-1B (Fragment) OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab1b PE=2 SV=1; Ras-related protein Rab-1B OS=Mus musculus OX=10090 GN=Rab1b PE=1 SV=1 0 3 3 0.7097 0 1 1 1 634.021 1900.04844 1900.04749 0.5 0.00032 0/0 0 0 27851432 HCD 30 MS2 3.520043 1150.1 73.186 72.7685 22165 22165 22159 QEplus033719.raw F4 1168.5 1000.2 1246 920.6 1386 1179.6 405 3.72 1 FALSE 1.14E-05 4.85E-09 1.677 -250 109686 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLCDYSK [R].tLcDYSk.[R] N-Term(TMT6plex); C3(Carbamidomethyl); K7(TMT6plex) 2 Q8CIG8 Protein arginine N-methyltransferase 5 OS=Mus musculus OX=10090 GN=Prmt5 PE=1 SV=3 A0A0R4J049; Q8CIG8 Protein arginine N-methyltransferase 5 OS=Mus musculus OX=10090 GN=Prmt5 PE=1 SV=1; Protein arginine N-methyltransferase 5 OS=Mus musculus OX=10090 GN=Prmt5 PE=1 SV=3 0 2 2 0.5415 0 1 1 1 672.86627 1344.72527 1344.72336 1.42 0.00095 0/0 0 0 11237038 HCD 30 MS2 9.247728 773 110 72.771 22166 22166 22159 QEplus033719.raw F4 764 619 850.7 675.1 830.3 899 280 2.77 1 FALSE 0.0005556 0.008382 0.432 -250 109693 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILSEQNK [K].iLSEQNk.[A] N-Term(TMT6plex); K7(TMT6plex) 33 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 2 2 0.125 0 1 1 1 645.39569 1289.78411 1289.78292 0.92 0.00059 0/0 0 0 16280864 HCD 30 MS2 13.24623 1209.9 110 72.7736 22167 22167 22159 QEplus033719.raw F4 1223 949.1 1211.3 1206.7 1241.6 1427.5 552 2.56 1 FALSE 0.0003803 0.006978 0.458 -250 109709 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FTQSGTMK [R].fTQSGTMk.[MI] N-Term(TMT6plex); K8(TMT6plex) 5 Q3UYZ8 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ctcf PE=2 SV=1 Q3UYZ8; A2APF3; A2APF3-2; Q3USR8; Q61164 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ctcf PE=2 SV=1; Transcriptional repressor CTCFL OS=Mus musculus OX=10090 GN=Ctcfl PE=1 SV=1; Isoform 2 of Transcriptional repressor CTCFL OS=Mus musculus OX=10090 GN=Ctcfl; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ctcf PE=2 SV=1; Transcriptional repressor CTCF OS=Mus musculus OX=10090 GN=Ctcf PE=1 SV=2 0 2 2 0.0201 0 1 1 1 679.38141 1357.75554 1357.75499 0.4 0.00027 0/0 0 0 6557136 HCD 30 MS2 14.4152 579.9 110 72.7786 22169 22169 22159 QEplus033719.raw F4 561.7 533.9 622.9 503.5 624.1 633.3 361 2.49 1 FALSE 0.0008445 0.01164 0.379 -250 109724 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGDLLAAQAR [K].eGDLLAAQAR.[L] N-Term(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 0 2 2 0.6174 0 1 1 1 636.85986 1272.71245 1272.71093 1.19 0.00076 0/0 0 0 29274090 HCD 30 MS2 15.69905 841.2 68.683 72.7882 22172 22172 22170 QEplus033719.raw F4 860.6 727.4 921 685.7 1006.3 846.3 348 3.11 1 FALSE 1.14E-05 8.24E-07 1.253 -250 109742 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPVSITEHPK [K].tPVSITEHPk.[I] N-Term(TMT6plex); K10(TMT6plex) 1 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 3 3 0.6712 0 1 1 1 522.98035 1566.92649 1566.92556 0.59 0.00031 0/0 0 0 23566520 HCD 30 MS2 44.66748 945.2 47.787 72.7927 22174 22174 22170 QEplus033719.raw F4 1157.2 715.8 910.6 856.7 1178.5 852.5 394 4.44 1 FALSE 1.14E-05 9.25E-08 1.434 -250 109747 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LNTEDIKR [K].lNTEDIkR.[H] N-Term(TMT6plex); K7(TMT6plex) 4 Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1;ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TS02; Q3UEA1; Q3V117; Q91V92 ATP citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate (pro-S-)-lyase (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 1 3 3 0.51 0 1 1 1 482.96158 1446.87018 1446.86805 1.47 0.00071 0/0 0 0 23849562 HCD 30 MS2 28.34833 1179.8 63.557 72.7949 22175 22175 22170 QEplus033719.raw F4 1154 1226.9 1378.9 929.1 1186.9 1202.7 469 3 2 FALSE 2.26E-05 0.001078 0.655 -250 109754 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHAGPITK [K].iHAGPITk.[H] N-Term(TMT6plex); K8(TMT6plex) 2 P62334 26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=1 Q8QZS9; P62334 Psmc6 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc6 PE=2 SV=1; 26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=1 0 3 3 0.532 0 1 1 1 432.28018 1294.82599 1294.82473 0.98 0.00042 0/0 0 0 14390593 HCD 30 MS2 24.70592 777.1 102.475 72.7973 22176 22176 22170 QEplus033719.raw F4 904.9 558.6 784 637 867.5 910.6 133 4.06 1 FALSE 1.14E-05 2.45E-05 0.973 -250 109764 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MFSSSAK [-].mFSSSAk.[I] N-Term(TMT6plex); K7(TMT6plex) 1 Q4FZE6 40S ribosomal protein S7 OS=Mus musculus OX=10090 GN=Rps7 PE=2 SV=1 Q4FZE6 40S ribosomal protein S7 OS=Mus musculus OX=10090 GN=Rps7 PE=2 SV=1 0 2 2 0.5455 0 1 1 1 608.34491 1215.68254 1215.68077 1.46 0.00089 0/0 0 0 14309547 HCD 30 MS2 19.1359 1154.3 110 72.7998 22177 22177 22170 QEplus033719.raw F4 1112.9 1000.6 1285.6 655.8 1734.7 1136 378 2.64 1 FALSE 0.0002518 0.005151 0.498 -250 109773 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDETDASSAVK [K].mDETDASSAVk.[V] N-Term(TMT6plex); K11(TMT6plex) 12 Q8BUM1 TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1 Q8R0B4; Q8BUM1; C9DT14; A0A087WR97; D2KPZ5; Q6VYI5; A0A087WSE4; A0A087WRZ5; Q544R5; Q8BLD4; Q6VYI4; Q05C33 TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1; TAR DNA-binding protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 (Fragment) OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=1 SV=1; TAR DNA-binding protein 43 OS=Mus musculus OX=10090 GN=Tardbp PE=2 SV=1 0 3 3 0.7356 0 1 1 1 537.94861 1611.83127 1611.83001 0.78 0.00042 0/0 0 0 13285187 HCD 30 MS2 43.16514 1171.2 100.782 72.8022 22178 22178 22170 QEplus033719.raw F4 1179.5 986.5 1159 849.6 1454.4 1398 235 3.48 1 FALSE 1.14E-05 2.93E-06 1.149 -250 109800 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIAAHIK [K].dIAAHIk.[K] N-Term(TMT6plex); K7(TMT6plex) 3 Q9D6F6 Dynein light chain OS=Mus musculus OX=10090 GN=Dynll1 PE=2 SV=1 Q80ZS7; Q9D6F6; P63168 "Dynein light chain OS=Mus musculus OX=10090 GN=BC048507 PE=1 SV=1; Dynein light chain OS=Mus musculus OX=10090 GN=Dynll1 PE=2 SV=1; Dynein light chain 1, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll1 PE=1 SV=1" 0 3 3 0.2426 0 1 1 1 409.26215 1225.77188 1225.76688 4.08 0.00167 0/0 0 0 10239916 HCD 30 MS2 44.74071 1011.1 110 72.8167 22183 22183 22181 QEplus033719.raw F4 1596.9 626 901 650.1 1121.3 1171.5 189 2.35 1 FALSE 0.00219 0.04243 0.166 -250 109823 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGGNFGPGPGSNFR [R].gGGGNFGPGPGSNFR.[G] N-Term(TMT6plex) 4 O88569 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2 O88569-3; B7ZP22; O88569; O88569-2 Isoform 3 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2; Isoform 2 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 0 2 2 0.6945 0 1 1 1 803.90039 1606.7935 1606.79237 0.71 0.00057 0/0 0 0 13989934 HCD 30 MS2 0 529.8 110 72.8238 22186 22186 22181 QEplus033719.raw F4 546.6 502.5 579.1 388.4 651.3 511.1 129 4.91 1 FALSE 1.14E-05 4.96E-15 2.814 -250 109827 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTGLHK [RK].lTGLHk.[GM] N-Term(TMT6plex); K6(TMT6plex) 7 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q7TN33; Q62261; D6RGB9; D6RHP1; A0A0A0MQG2; D3YU11; Q62261-2 "CUGBP Elav-like family member 6 OS=Mus musculus OX=10090 GN=Celf6 PE=2 SV=1; Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; CUGBP Elav-like family member 6 OS=Mus musculus OX=10090 GN=Celf6 PE=1 SV=1; CUGBP Elav-like family member 6 OS=Mus musculus OX=10090 GN=Celf6 PE=1 SV=1; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; CUGBP Elav-like family member 6 OS=Mus musculus OX=10090 GN=Celf6 PE=1 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 3 3 0.0536 0 1 1 1 376.25018 1126.736 1126.73485 1.02 0.00038 0/0 0 0 13087062 HCD 30 MS2 24.58277 1022.1 110 72.8262 22187 22187 22181 QEplus033719.raw F4 1058.7 765.4 1141 1002.1 1072.8 1092.4 87 2.24 2 FALSE 0.001248 0.01702 0.31 -250 109835 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGNCPFSQR [K].iGNcPFSQR.[L] N-Term(TMT6plex); C4(Carbamidomethyl) 2 Q542F1 Chloride intracellular channel protein OS=Mus musculus OX=10090 GN=Clic1 PE=1 SV=1 Q3TIP8; Q542F1 Chloride intracellular channel protein OS=Mus musculus OX=10090 GN=Clic1 PE=2 SV=1; Chloride intracellular channel protein OS=Mus musculus OX=10090 GN=Clic1 PE=1 SV=1 0 2 2 0.669 0 1 1 1 654.34088 1307.67449 1307.67277 1.31 0.00086 0/0 0 0 9162952 HCD 30 MS2 9.223235 928.8 110 72.8288 22188 22188 22181 QEplus033719.raw F4 979.6 952.3 992.2 643.9 1179.5 825.1 202 2.87 1 FALSE 1.14E-05 0.0007892 0.683 -250 109842 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MLMPHSK [R].mLMPHSk.[A] N-Term(TMT6plex); K7(TMT6plex) 2 Q9DCA5 Ribosome biogenesis protein BRX1 homolog OS=Mus musculus OX=10090 GN=Brix1 PE=1 SV=3 E9Q2V8; Q9DCA5 Brix domain-containing protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Brix1 PE=1 SV=1; Ribosome biogenesis protein BRX1 homolog OS=Mus musculus OX=10090 GN=Brix1 PE=1 SV=3 0 3 3 0.4618 0 1 1 1 434.58777 1301.74875 1301.74741 1.03 0.00045 0/0 0 0 8717074 HCD 30 MS2 59.01193 953.1 110 72.8313 22189 22189 22181 QEplus033719.raw F4 930.8 852 1093.3 664.3 1069.7 1108.6 372 2.49 1 FALSE 0.005628 0.09465 0.021 -250 109857 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLAPGECHQVMK [R].sLAPGEcHQVMk.[N] N-Term(TMT6plex); C7(Carbamidomethyl); K12(TMT6plex) 17 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 F6XCT0; Q9QXZ0-3; B1ARU4; F6SHS0; E9QA63; E9QNP1; Q3UPG9; Q5DTZ2; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8 Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; MKIAA1251 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 3 3 0.7058 0 1 1 1 605.66022 1814.9661 1814.96573 0.2 0.00012 0/0 0 0 4690896.5 HCD 30 MS2 19.36184 749.2 110 72.8363 22191 22191 22181 QEplus033719.raw F4 825.1 553.3 856.1 716.4 712.9 831.4 345 4.69 3 FALSE 1.14E-05 1.33E-06 1.214 -250 109862 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDIDIRK [K].cDIDIRk.[D] N-Term(TMT6plex); C1(Carbamidomethyl); K7(TMT6plex) 12 Q3UIJ3; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q3TG92; P63268; Q3UIJ3; Q9CXK3; Q61275; Q3U122; Q61272; P62737; P68134; P68033; Q61852; Q61264 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1" 1 3 3 0.2199 0 1 1 1 459.93622 1377.7941 1377.79244 1.2 0.00055 0/0 0 0 617951232 HCD 30 MS2 9.906522 629.7 2.018 72.8436 22193 22193 22192 QEplus033719.raw F4 711.4 221.8 708.8 748.8 397.9 989.2 483 2.41 3 FALSE 0.008526 0.1505 -0.088 -250 109869 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVEVGSK [K].vVEVGSk.[I] N-Term(TMT6plex); K7(TMT6plex) 6 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480; A0A1L1SU37; A0A1L1SSN6; A0A1L1SQV8; P52480-2; A0A1L1STV8 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1 0 3 3 0.3846 0 1 1 1 392.58511 1175.74079 1175.73999 0.67 0.00026 0/0 0 0 16906548 HCD 30 MS2 15.02037 523.3 77.234 72.8458 22194 22194 22192 QEplus033719.raw F4 498.5 453.8 511.3 481.4 651.2 543.4 440 2.6 2 FALSE 0.001125 0.01483 0.335 -250 109879 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTSLGK [RK].vTSLGk.[D] N-Term(TMT6plex); K6(TMT6plex) 6 P63254; Q9DCT8 Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=2;Cysteine-rich protein 2 OS=Mus musculus OX=10090 GN=Crip2 PE=1 SV=1 P63254; Q6P3B4; A0A0G2JEK2; Q8C2N7; A0A0G2JF37; Q9DCT8 Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=2; Cysteine-rich protein 1 (Intestinal) OS=Mus musculus OX=10090 GN=Crip1 PE=2 SV=1; Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Crip1 PE=2 SV=1; Cysteine-rich protein 2 OS=Mus musculus OX=10090 GN=Crip2 PE=1 SV=1; Cysteine-rich protein 2 OS=Mus musculus OX=10090 GN=Crip2 PE=1 SV=1 0 2 2 0.249 0 1 1 1 531.84985 1062.69243 1062.69232 0.11 0.00006 0/0 0 0 46418184 HCD 30 MS2 12.12586 1124.4 33.801 72.8503 22196 22196 22192 QEplus033719.raw F4 1343.3 963.6 1194.1 967.6 1266.3 1011.6 63 2.45 2 FALSE 0.006897 0.1093 -0.018 -250 109889 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYGALK [K].dYGALk.[D] N-Term(TMT6plex); K6(TMT6plex) 2 Q8R010 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 OS=Mus musculus OX=10090 GN=Aimp2 PE=1 SV=2 Q8R3V2; Q8R010 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 OS=Mus musculus OX=10090 GN=Aimp2 PE=1 SV=1; Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 OS=Mus musculus OX=10090 GN=Aimp2 PE=1 SV=2 0 2 2 0.1909 0 1 1 1 562.84003 1124.67278 1124.67158 1.06 0.0006 0/0 0 0 36794924 HCD 30 MS2 11.97416 1263.8 40.076 72.8526 22197 22197 22192 QEplus033719.raw F4 1395.6 972.9 1370 1143.8 1281.6 1418.9 179 2.2 1 FALSE 0.005879 0.09792 0.012 -250 109905 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILSEQNK [K].iLSEQNk.[A] N-Term(TMT6plex); K7(TMT6plex) 33 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 2 2 0.1192 0 1 1 1 645.39606 1289.78484 1289.78292 1.49 0.00096 0/0 0 0 14105947 HCD 30 MS2 13.03967 1121.5 110 72.8576 22199 22199 22192 QEplus033719.raw F4 1126.1 934.2 1153.3 1030.5 1189.3 1295.3 485 2.6 1 FALSE 0.0003996 0.007195 0.454 -250 109926 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSGADGYETEGIR [R].vSGADGYETEGIR.[G] N-Term(TMT6plex) 3 Q3ULG5 DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1 Q3ULG5; Q3UC10; P97311 DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=2 SV=1; DNA replication licensing factor MCM6 OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1 0 2 2 0.7255 0 1 1 1 791.89886 1582.79045 1582.79103 -0.37 -0.00029 0/0 0 0 4284109.5 HCD 30 MS2 12.82086 353 110 72.8652 22202 22202 22192 QEplus033719.raw F4 344.1 410.2 321.4 228.8 546.6 266.9 138 4.19 1 FALSE 1.14E-05 7.74E-12 2.208 -250 109932 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DKEETIQDTQEEK [K].dkEETIQDTQEEk.[L] N-Term(TMT6plex); K2(TMT6plex); K13(TMT6plex) 13 O70318 Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2 Q811B2; B6ZHC6; O70318; B6ZHD0; Q80UE5; Q8CGJ6; Q80UE3; Q80UE4; A0A1W2P6I5; B6ZHC5; B6ZHC7; Q8C928; Q3UNQ6 Epb4.1l2 protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Epb4.1l2 protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Protein 4.1G OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1 1 3 3 0.7522 0 1 1 1 760.74426 2280.21823 2280.2174 0.37 0.00028 0/0 0 0 20902124 HCD 30 MS2 6.274889 609.7 110 72.8725 22204 22204 22203 QEplus033719.raw F4 570 652.8 766.6 399.3 710.5 558.8 428 5.81 1 FALSE 1.14E-05 6.31E-16 3.077 -250 109939 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNEAREELMR [R].vNEAREELMR.[M] N-Term(TMT6plex) 2 P61205 ADP-ribosylation factor 3 OS=Mus musculus OX=10090 GN=Arf3 PE=2 SV=2 P61205; P84078 ADP-ribosylation factor 3 OS=Mus musculus OX=10090 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Mus musculus OX=10090 GN=Arf1 PE=1 SV=2 1 2 2 0.6687 0 1 1 1 738.39594 1475.78459 1475.78378 0.55 0.00041 0/0 0 0 14487661 HCD 30 MS2 0 275.7 110 72.875 22205 22205 22203 QEplus033719.raw F4 288 248.3 301.5 195.8 337.4 283.2 302 3.29 1 FALSE 1.14E-05 2.43E-07 1.354 -250 109944 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGGNFGPGPGSNFR [R].gGGGNFGPGPGSNFR.[G] N-Term(TMT6plex) 4 O88569 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2 O88569-3; B7ZP22; O88569; O88569-2 Isoform 3 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2; Isoform 2 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 0 3 3 0.7335 0 1 1 1 536.26904 1606.79258 1606.79237 0.13 0.00007 0/0 0 0 26540910 HCD 30 MS2 16.1489 475.6 48.309 72.8773 22206 22206 22203 QEplus033719.raw F4 483.2 433.5 527 343.1 578.6 488.2 131 5.14 1 FALSE 1.14E-05 2.83E-12 2.291 -250 109948 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RALDLTMR [K].rALDLTMR.[H] N-Term(TMT6plex) 2 Q9CQB4 Cytochrome b-c1 complex subunit 7 OS=Mus musculus OX=10090 GN=Uqcrb PE=1 SV=1 Q9CQB4; Q9D855 Cytochrome b-c1 complex subunit 7 OS=Mus musculus OX=10090 GN=Uqcrb PE=1 SV=1; Cytochrome b-c1 complex subunit 7 OS=Mus musculus OX=10090 GN=Uqcrb PE=1 SV=3 1 3 3 0.5223 0 1 1 1 402.23938 1204.70359 1204.70334 0.2 0.00008 0/0 0 0 23244526 HCD 30 MS2 27.09128 511.2 53.674 72.8795 22207 22207 22203 QEplus033719.raw F4 552.5 362.8 501.8 450.4 607.4 592.5 459 3.81 1 FALSE 1.14E-05 3.25E-06 1.14 -250 109957 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATSPSTLVSTGPSSR [K].aTSPSTLVSTGPSSR.[S] N-Term(TMT6plex) 10 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; A0A0G2JFT4; A0A0G2JG35; A0A140T8T5; P27546-3; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 3 3 0.6816 0 1 1 1 559.64008 1676.90567 1676.90164 2.4 0.00134 0/0 0 0 18960724 HCD 30 MS2 40.63184 775.1 56.003 72.8818 22208 22208 22203 QEplus033719.raw F4 735.1 709.6 800.9 612 1011 782.2 424 4.68 2 FALSE 1.14E-05 3.35E-06 1.138 -250 109965 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATSPSTLVSTGPSSR [K].aTSPSTLVSTGPSSR.[S] N-Term(TMT6plex) 10 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; A0A0G2JFT4; A0A0G2JG35; A0A140T8T5; P27546-3; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 2 2 0.7404 0 1 1 1 838.95795 1676.90862 1676.90164 4.16 0.00349 0/0 0 0 10803086 HCD 30 MS2 0 572.1 110 72.8843 22209 22209 22203 QEplus033719.raw F4 569.9 533.2 598.7 459 693.1 578.8 410 4.7 2 FALSE 1.14E-05 3.14E-11 2.092 -250 109973 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STTTGHLIYK [K].sTTTGHLIYk.[C] N-Term(TMT6plex); K10(TMT6plex) 7 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; P62631; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Mus musculus OX=10090 GN=Eef1a2 PE=1 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 0 4 4 0.6257 0 1 1 1 395.48743 1578.92788 1578.92556 1.47 0.00058 0/0 0 0 10850495 HCD 30 MS2 12.95233 411.2 110 72.8868 22210 22210 22203 QEplus033719.raw F4 448.9 343.6 389.6 430.3 584.3 270.8 416 3.5 1 FALSE 1.14E-05 0.0004315 0.735 -250 109977 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQTVYYAK [R].eQTVYYAk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 Q9CXT8 Mitochondrial-processing peptidase subunit beta OS=Mus musculus OX=10090 GN=Pmpcb PE=1 SV=1 Q9CXT8; D3Z1T9; Q3TET5 Mitochondrial-processing peptidase subunit beta OS=Mus musculus OX=10090 GN=Pmpcb PE=1 SV=1; Mitochondrial-processing peptidase subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Pmpcb PE=1 SV=1; Beta-MPP (Fragment) OS=Mus musculus OX=10090 GN=Pmpcb PE=2 SV=1 0 2 2 0.643 0 1 1 1 730.41431 1459.82134 1459.8197 1.12 0.00082 0/0 0 0 5125597.5 HCD 30 MS2 0 443.9 110 72.8893 22211 22211 22203 QEplus033719.raw F4 414.7 341.1 496.7 520.9 411.6 478.4 379 3.95 1 FALSE 1.14E-05 2.72E-05 0.965 -250 109999 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQAGGDATENFEDVGHSTDAR [R].eQAGGDATENFEDVGHSTDAR.[E] N-Term(TMT6plex) 3 G5E850 Cytochrome b5 OS=Mus musculus OX=10090 GN=Cyb5a PE=1 SV=1 G5E850; E0CY88; P56395 Cytochrome b5 OS=Mus musculus OX=10090 GN=Cyb5a PE=1 SV=1; Cytochrome b5 OS=Mus musculus OX=10090 GN=Cyb5a PE=1 SV=1; Cytochrome b5 OS=Mus musculus OX=10090 GN=Cyb5a PE=1 SV=2 0 3 3 0.9228 0 1 1 1 812.36969 2435.09452 2435.09085 1.5 0.00122 0/0 0 0 6917468 HCD 30 MS2 0 90.2 110 72.9014 22215 22215 22214 QEplus033719.raw F4 99.3 89.1 82.5 80.1 123.9 66 33 9.2 1 FALSE 1.14E-05 6.31E-16 4.763 -250 110011 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNEAREELMR [R].vNEAREELMR.[M] N-Term(TMT6plex) 2 P61205 ADP-ribosylation factor 3 OS=Mus musculus OX=10090 GN=Arf3 PE=2 SV=2 P61205; P84078 ADP-ribosylation factor 3 OS=Mus musculus OX=10090 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Mus musculus OX=10090 GN=Arf1 PE=1 SV=2 1 3 3 0.6411 0 1 1 1 492.59927 1475.78327 1475.78378 -0.35 -0.00017 0/0 0 0 86701976 HCD 30 MS2 7.492063 678.5 23.004 72.9062 22217 22217 22214 QEplus033719.raw F4 675 604.4 761.3 500.6 850.9 678.8 301 4.04 1 FALSE 1.14E-05 5.88E-05 0.901 -250 110018 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQVEDAFR [K].aQVEDAFR.[Y] N-Term(TMT6plex) 4 Q3UHT6 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1 Q3UHT6; P19096; Q3TB22; A0A0U1RNJ1 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2; Fatty acid synthase (Fragment) OS=Mus musculus OX=10090 GN=Fasn PE=2 SV=1; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=1 0 2 2 0.534 0 1 1 1 582.81433 1164.62139 1164.62105 0.29 0.00017 0/0 0 0 34951868 HCD 30 MS2 20.41547 891 41.827 72.9085 22218 22218 22214 QEplus033719.raw F4 861.2 787.3 982.6 662 1002.8 1050.3 248 2.94 1 FALSE 1.14E-05 0.000127 0.837 -250 110027 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYWGNK [R].gYWGNk.[I] N-Term(TMT6plex); K6(TMT6plex) 10 Q3TXS9 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1 Q3TXS9; D3YVC1; Q3TLE5; Q3TI78; Q3TXR5; O89072; P25444; Q3TL20; D3YWJ3; Q3UB36 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 (Fragment) OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 (Fragment) OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=3; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=1; 40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=2 SV=1 0 2 2 0.5336 0 1 1 1 591.8374 1182.66753 1182.66716 0.31 0.00018 0/0 0 0 28014084 HCD 30 MS2 29.21167 1525.9 53.455 72.9107 22219 22219 22214 QEplus033719.raw F4 1376.5 1375.2 1786.5 1264.2 1645.6 1707.5 218 2.23 1 FALSE 0.005221 0.0891 0.037 -250 110035 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGEGFYK [K].tGEGFYk.[Y] N-Term(TMT6plex); K7(TMT6plex) 1 Q61425 "Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Hadh PE=1 SV=2" Q61425 "Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Hadh PE=1 SV=2" 0 2 2 0.568 0 1 1 1 630.35706 1259.70683 1259.70361 2.56 0.00161 0/0 0 0 14519271 HCD 30 MS2 53.07136 1220.3 110 72.9133 22220 22220 22214 QEplus033719.raw F4 1282.7 936 1332.1 1250.2 1145.5 1375.2 337 2.5 1 FALSE 0.0003211 0.006221 0.474 -250 110043 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITQYEK [K].iTQYEk.[S] N-Term(TMT6plex); K6(TMT6plex) 5 Q2YDW1 Eukaryotic translation initiation factor 3 30 kDa subunit (Fragment) OS=Mus musculus OX=10090 GN=Eif3j PE=2 SV=1 Q66JW9; Q2YDW1; Q99JK5; Q66JS6; Q3UGC7 Eukaryotic translation initiation factor 3 30 kDa subunit (Fragment) OS=Mus musculus OX=10090 GN=Eif3j PE=2 SV=1; Eukaryotic translation initiation factor 3 30 kDa subunit (Fragment) OS=Mus musculus OX=10090 GN=Eif3j PE=2 SV=1; Eukaryotic translation initiation factor 3 30 kDa subunit OS=Mus musculus OX=10090 GN=Eif3j PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit J-B OS=Mus musculus OX=10090 GN=Eif3j2 PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit J-A OS=Mus musculus OX=10090 GN=Eif3j1 PE=2 SV=1 0 2 2 0.293 0 1 1 1 620.37164 1239.73601 1239.73491 0.89 0.00055 0/0 0 0 13243601 HCD 30 MS2 48.35422 1461.5 110 72.9158 22221 22221 22214 QEplus033719.raw F4 1602.8 1159.8 1539.6 1431.1 1433.8 1601.7 282 2.73 1 FALSE 0.002056 0.03672 0.187 -250 110053 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDSPDLPK [K].dDSPDLPk.[L] N-Term(TMT6plex); K8(TMT6plex) 1 P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor 0 2 2 0.3074 0 1 1 1 672.87122 1344.73516 1344.74112 -4.43 -0.00298 0/0 0 0 9701745 HCD 30 MS2 10.98324 909.5 110 72.9183 22222 22222 22214 QEplus033719.raw F4 952 463.9 658.4 531.7 2119.9 731 303 3.09 1 TRUE 0.0008805 0.01219 0.371 -250 110062 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATPRPDSNSLASSAPATK [K].aTPRPDSNSLASSAPATk.[D] N-Term(TMT6plex); K18(TMT6plex) 7 O08784 Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 Q3TBZ3; H3BIX0; Q05BH6; O08784; Q7TPZ2; Q3TAB2; H3BL37 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 0 3 3 0.7401 0 1 1 1 743.74677 2229.22574 2229.22393 0.81 0.0006 0/0 0 0 2880676.5 HCD 30 MS2 28.08114 278.2 110 72.9208 22223 22223 22214 QEplus033719.raw F4 279.3 258.4 319.5 222.1 305 284.7 425 6.31 1 FALSE 1.14E-05 6.31E-16 3.588 -250 110069 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLQSEPLPER [R].tLQSEPLPER.[L] N-Term(TMT6plex) 14 Q3TJ07 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1 Q3TJ07; V9GX87; Q641P2; A2A5R8; Q9Z108; Q3TWA1; Q3U7A6; Q3UKX3; Q6TNG5; Q3UTC8; A2A5S3; Q3TWP5; Q3TU43; Q9DBE7 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus OX=10090 GN=Stau1 PE=1 SV=1; Stau1 protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus OX=10090 GN=Stau1 PE=1 SV=1; Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus OX=10090 GN=Stau1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Staufen OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus OX=10090 GN=Stau1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus OX=10090 GN=Stau1 PE=1 SV=1 0 2 2 0.2944 0 1 1 1 699.89105 1398.77483 1398.77901 -2.99 -0.00209 0/0 0 0 3718096.25 HCD 30 MS2 27.52087 552 110 72.9233 22224 22224 22214 QEplus033719.raw F4 550.9 458 603.4 425.8 657.3 616.4 305 1.97 1 FALSE 0.001615 0.02603 0.238 -250 110084 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEAGDKKPETK [K].lEAGDkkPETk.[-] N-Term(TMT6plex); K6(TMT6plex); K7(TMT6plex); K11(TMT6plex) 1 Q9DCT2 "NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs3 PE=1 SV=2" Q9DCT2 "NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs3 PE=1 SV=2" 1 3 3 0.4398 0 1 1 1 711.44196 2132.31131 2132.30967 0.77 0.00055 0/0 0 0 4270573.5 HCD 30 MS2 43.2649 242.9 110 72.9331 22227 22227 22225 QEplus033719.raw F4 246.8 188.5 247.2 259.6 251 264.5 212 1.66 1 FALSE 0.005422 0.09245 0.027 -250 110092 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYITEDELRR [K].nYITEDELRR.[E] N-Term(TMT6plex) 3 A1BN54; Q7TPR4 Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1;Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 Q99LJ3; A1BN54; Q7TPR4 Actn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Actn1 PE=2 SV=1; Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1; Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 1 3 3 0.6261 0 1 1 1 513.27765 1537.81839 1537.81719 0.79 0.0004 0/0 0 0 18595900 HCD 30 MS2 24.53104 807.5 87.227 72.9354 22228 22228 22225 QEplus033719.raw F4 817.4 733 904.8 648.8 925 816.1 352 4.52 2 FALSE 1.14E-05 1.58E-09 1.769 -250 110109 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPSQSDPVLK [R].sPSQSDPVLk.[V] N-Term(TMT6plex); K10(TMT6plex) 5 Q9CPV4 Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=1 F6ZTG3; E9Q197; Q9CPV4-2; Q9CPV4; Q9CPV4-3 Glyoxalase domain-containing protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=1; Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=1; Isoform 2 of Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4; Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4 PE=1 SV=1; Isoform 3 of Glyoxalase domain-containing protein 4 OS=Mus musculus OX=10090 GN=Glod4 0 2 2 0.3714 0 1 1 1 758.44354 1515.87981 1515.87828 1.01 0.00076 0/0 0 0 14178889 HCD 30 MS2 14.74935 577.4 110 72.9402 22230 22230 22225 QEplus033719.raw F4 607.7 423.5 618.3 625.9 535.6 653.5 363 2.8 1 FALSE 1.14E-05 1.49E-05 1.015 -250 110116 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDIAMAK [K].qDIAMAk.[S] N-Term(TMT6plex); K7(TMT6plex) 3 P47758 Signal recognition particle receptor subunit beta OS=Mus musculus OX=10090 GN=Srprb PE=1 SV=1 P47758; A0A1W2P830; Q542X6 Signal recognition particle receptor subunit beta OS=Mus musculus OX=10090 GN=Srprb PE=1 SV=1; Signal recognition particle receptor subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Srprb PE=1 SV=1; Signal recognition particle receptor subunit beta OS=Mus musculus OX=10090 GN=Srprb PE=2 SV=1 0 2 2 0.1914 0 1 1 1 617.86237 1234.71745 1234.72296 -4.46 -0.00275 0/0 0 0 7422767 HCD 30 MS2 29.08005 1016.2 110 72.9427 22231 22231 22225 QEplus033719.raw F4 1024.9 870.9 1082.4 835.6 1224 1059.3 418 1.62 1 FALSE 0.002267 0.04451 0.159 -250 110129 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NADELVK [K].nADELVk.[Q] N-Term(TMT6plex); K7(TMT6plex) 2 P11983 T-complex protein 1 subunit alpha OS=Mus musculus OX=10090 GN=Tcp1 PE=1 SV=3 P11983-2; P11983 Isoform 2 of T-complex protein 1 subunit alpha OS=Mus musculus OX=10090 GN=Tcp1; T-complex protein 1 subunit alpha OS=Mus musculus OX=10090 GN=Tcp1 PE=1 SV=3 0 2 2 0.408 0 1 1 1 623.87421 1246.74114 1246.74072 0.33 0.00021 0/0 0 0 55242672 HCD 30 MS2 28.8323 1519.3 34.037 72.9475 22233 22233 22225 QEplus033719.raw F4 1658 1249.7 1718.7 1265 1571.6 1652.6 619 2.99 1 FALSE 0.0003408 0.006414 0.47 -250 110140 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CDIDIRK [K].cDIDIRk.[D] N-Term(TMT6plex); C1(Carbamidomethyl); K7(TMT6plex) 12 Q3UIJ3; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q3TG92; P63268; Q3UIJ3; Q9CXK3; Q61275; Q3U122; Q61272; P62737; P68134; P68033; Q61852; Q61264 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Smooth muscle gamma-actin OS=Mus musculus OX=10090 PE=3 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1" 1 2 2 0.2451 0 1 1 1 689.40222 1377.79717 1377.79244 3.43 0.00236 0/0 0 0 8210146.5 HCD 30 MS2 12.33513 580.6 110 72.9593 22237 22237 22236 QEplus033719.raw F4 615.3 331.8 593.7 593.1 632.1 717.9 440 2.53 3 FALSE 0.0006383 0.009875 0.406 -250 110147 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESNGTVMGAELR [K].eSNGTVMGAELR.[H] N-Term(TMT6plex) 3 P09541 Myosin light chain 4 OS=Mus musculus OX=10090 GN=Myl4 PE=1 SV=3 Q9CZ19; A2A6Q8; P09541 Myosin light chain 4 OS=Mus musculus OX=10090 GN=Myl4 PE=1 SV=1; Myosin light chain 4 (Fragment) OS=Mus musculus OX=10090 GN=Myl4 PE=1 SV=8; Myosin light chain 4 OS=Mus musculus OX=10090 GN=Myl4 PE=1 SV=3 0 2 2 0.6063 0 1 1 1 746.88483 1492.76238 1492.76271 -0.22 -0.00017 0/0 0 0 2352514.5 HCD 30 MS2 63.41858 346 110 72.9618 22238 22238 22236 QEplus033719.raw F4 349.5 225.9 359.6 414.4 297.5 429.3 225 3.48 1 FALSE 1.14E-05 4.85E-08 1.487 -250 110149 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGVITNR [R].iGVITNR.[E] N-Term(TMT6plex) 5 P62702 "40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2" V9GWY0; Q545F8; P62702; Q3V1Z5; Q3UXQ6 "40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Gm15013 PE=3 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1; 40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4l PE=2 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1" 0 2 2 0.3438 0 1 1 1 501.31921 1001.63115 1001.6305 0.65 0.00033 0/0 0 0 271600736 HCD 30 MS2 7.662253 756.9 5.731 72.9641 22239 22239 22236 QEplus033719.raw F4 761.5 591.2 842.1 660.9 844.7 840.9 50 2.56 1 FALSE 0.001559 0.02362 0.253 -250 110159 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRSEDGVEGDLGETQSR [R].lRSEDGVEGDLGETQSR.[T] N-Term(TMT6plex) 3 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 E9Q616; A0A494BBD5; Q8BRB8 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; AHNAK nucleoprotein (desmoyokin) (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; PDZ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1 1 3 3 0.8192 0 1 1 1 693.01721 2077.03708 2077.03591 0.57 0.00039 0/0 0 0 21676798 HCD 30 MS2 8.941419 336.9 110 72.9666 22240 22240 22236 QEplus033719.raw F4 316.1 303.4 386 270.2 373.9 371.9 201 6.47 1 FALSE 1.14E-05 6.31E-16 3.853 -250 110165 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLDSVAK [K].tLDSVAk.[E] N-Term(TMT6plex); K7(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 D3YUF7; P48678; P48678-2 Prelamin-A/C (Fragment) OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=1; Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 0 2 2 0.3389 0 1 1 1 596.37152 1191.73577 1191.73491 0.72 0.00043 0/0 0 0 20261038 HCD 30 MS2 26.48443 1550.9 80.5 72.9689 22241 22241 22236 QEplus033719.raw F4 1752.5 1326 1606.5 1172.4 1858.8 1589.2 312 3.01 1 FALSE 0.0002518 0.005122 0.498 -250 110174 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TFTEMDSHEEK [R].tFTEMDSHEEk.[V] N-Term(TMT6plex); K11(TMT6plex) 4 Q5XJY5 Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=1 SV=2 Q8C0G7; Q5XJY5; Q8R1S6; Q3U4S9 Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1; Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=1 SV=2; Coatomer subunit delta (Fragment) OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1; Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1 0 3 3 0.7201 0 1 1 1 604.63348 1811.8859 1811.88859 -1.48 -0.0009 0/0 0 0 8695477 HCD 30 MS2 0 983.7 110 72.9714 22242 22242 22236 QEplus033719.raw F4 1078.1 833.3 1050.4 814.2 1133.7 992.6 159 5.86 1 FALSE 1.14E-05 1.01E-10 1.996 -250 110185 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQVAQLK [R].eQVAQLk.[Q] N-Term(TMT6plex); K7(TMT6plex) 8 Q3TXR4 Transcription factor jun-B OS=Mus musculus OX=10090 GN=Junb PE=2 SV=1 Q3TXR4; Q3U2Y0; Q52L79; Q3US19; P15066; Q569U6; Q52L49; Q3V255 Transcription factor jun-B OS=Mus musculus OX=10090 GN=Junb PE=2 SV=1; Transcription factor jun-B OS=Mus musculus OX=10090 GN=Junb PE=2 SV=1; Activator protein 1 OS=Mus musculus OX=10090 GN=Jun PE=1 SV=1; Activator protein 1 OS=Mus musculus OX=10090 GN=Jun PE=2 SV=1; Transcription factor jun-D OS=Mus musculus OX=10090 GN=Jund PE=1 SV=1; Transcription factor jun-B OS=Mus musculus OX=10090 GN=Junb PE=1 SV=1; Transcription factor jun-D OS=Mus musculus OX=10090 GN=Jund PE=2 SV=1; Activator protein 1 OS=Mus musculus OX=10090 GN=Jun PE=2 SV=1 0 2 2 0.207 0 1 1 1 637.39795 1273.78862 1273.78801 0.48 0.00031 0/0 0 0 10993898 HCD 30 MS2 44.13845 1041.3 110 72.9764 22244 22244 22236 QEplus033719.raw F4 1045.6 905.3 1037.1 807.4 1430.6 1021.9 534 2.85 1 FALSE 9.73E-05 0.002939 0.56 -250 110191 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SETNWESPK [K].sETNWESPk.[Q] N-Term(TMT6plex); K9(TMT6plex) 1 Q80WJ7 Protein LYRIC OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1 Q80WJ7 Protein LYRIC OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1 0 2 2 0.6463 0 1 1 1 768.4093 1535.81133 1535.81059 0.48 0.00037 0/0 0 0 8499580 HCD 30 MS2 0 599.8 110 72.9789 22245 22245 22236 QEplus033719.raw F4 599.6 471.4 673.5 605.9 548.2 700.2 278 4.1 1 FALSE 1.14E-05 1.35E-06 1.213 -250 110219 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIYDPK [R].qIYDPk.[Y] N-Term(TMT6plex); K6(TMT6plex) 3 Q543F3 Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1 Q922F8; Q543F3; D3Z7R6 Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=2 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn2 PE=1 SV=1 0 2 2 0.4302 0 1 1 1 611.36639 1221.72551 1221.72434 0.95 0.00058 0/0 0 0 28169722 HCD 30 MS2 12.02701 1420.3 78.455 72.9936 22250 22250 22247 QEplus033719.raw F4 1427.4 1489.4 1611.7 825.5 2000.3 1167.5 353 1.79 1 FALSE 0.004508 0.0804 0.06 -250 110235 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YMESVK [K].yMESVk.[L] N-Term(TMT6plex); K6(TMT6plex) 7 Q8CA60 Protein kinase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Vrk1 PE=2 SV=1 Q8CA60; A0A1Y7VMH3; Q80X41-2; Q80X41-5; Q3UWH3; Q3TL56; Q80X41 Protein kinase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Vrk1 PE=2 SV=1; Serine/threonine-protein kinase VRK1 OS=Mus musculus OX=10090 GN=Vrk1 PE=1 SV=1; Isoform 2 of Serine/threonine-protein kinase VRK1 OS=Mus musculus OX=10090 GN=Vrk1; Isoform 5 of Serine/threonine-protein kinase VRK1 OS=Mus musculus OX=10090 GN=Vrk1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Vrk1 PE=2 SV=1; Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Vrk1 PE=2 SV=1; Serine/threonine-protein kinase VRK1 OS=Mus musculus OX=10090 GN=Vrk1 PE=1 SV=2 0 2 2 0.2008 0 1 1 1 607.849 1214.69072 1214.68552 4.28 0.0026 0/0 0 0 9132723 HCD 30 MS2 23.41146 1202.5 110 72.9986 22252 22252 22247 QEplus033719.raw F4 1326.8 1081.5 1210.2 851.3 1638 1107.5 251 2.49 1 FALSE 0.002956 0.0576 0.12 -250 110244 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHAGPITK [K].iHAGPITk.[H] N-Term(TMT6plex); K8(TMT6plex) 2 P62334 26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=1 Q8QZS9; P62334 Psmc6 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc6 PE=2 SV=1; 26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=1 0 2 2 0.5993 0 1 1 1 647.91705 1294.82683 1294.82473 1.62 0.00105 0/0 0 0 8986444 HCD 30 MS2 36.50191 1011.7 110 73.0011 22253 22253 22247 QEplus033719.raw F4 1002 871.3 1164.4 855.1 1075.7 1102 104 3.02 1 FALSE 0.001903 0.03235 0.205 -250 110267 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTSLGK [RK].vTSLGk.[D] N-Term(TMT6plex); K6(TMT6plex) 6 P63254; Q9DCT8 Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=2;Cysteine-rich protein 2 OS=Mus musculus OX=10090 GN=Crip2 PE=1 SV=1 P63254; Q6P3B4; A0A0G2JEK2; Q8C2N7; A0A0G2JF37; Q9DCT8 Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=2; Cysteine-rich protein 1 (Intestinal) OS=Mus musculus OX=10090 GN=Crip1 PE=2 SV=1; Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Crip1 PE=2 SV=1; Cysteine-rich protein 2 OS=Mus musculus OX=10090 GN=Crip2 PE=1 SV=1; Cysteine-rich protein 2 OS=Mus musculus OX=10090 GN=Crip2 PE=1 SV=1 0 3 3 0.0594 0 1 1 1 354.90256 1062.69312 1062.69232 0.76 0.00027 0/0 0 0 6488961.5 HCD 30 MS2 14.79255 556.5 110 73.0086 22256 22256 22247 QEplus033719.raw F4 655.5 431.5 609.3 512.5 608.9 521.3 63 2.02 2 FALSE 0.002628 0.05183 0.137 -250 110299 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVMDDLDR [K].kVMDDLDR.[A] N-Term(TMT6plex); K1(TMT6plex) 6 Q6XMP4 Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1 Q6XMP4; Q8R346; Q8BGQ7; Q6PDM7; Q3TZ32; Q3UD67 "Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=2; Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1" 1 3 3 0.4525 0 1 1 1 483.94351 1449.81598 1449.81357 1.66 0.0008 0/0 0 0 23246352 HCD 30 MS2 27.25009 1439.6 60.741 73.0232 22261 22261 22258 QEplus033719.raw F4 1516.5 1301.7 1607.1 1075.2 1676.7 1460.4 439 3.05 1 FALSE 0.0002218 0.00452 0.513 -250 110307 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CSVNLANK [K].cSVNLANk.[R] N-Term(TMT6plex); C1(Carbamidomethyl); K8(TMT6plex) 3 A2AEX6 Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1 A2AEX6; P97447; A2AEX8 Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1; Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=3; Four and a half LIM domains protein 1 OS=Mus musculus OX=10090 GN=Fhl1 PE=1 SV=1 0 2 2 0.6113 0 1 1 1 682.39264 1363.778 1363.77679 0.89 0.00061 0/0 0 0 20322238 HCD 30 MS2 10.1996 1151.6 86.876 73.0255 22262 22262 22258 QEplus033719.raw F4 1331.3 748.9 1092.2 1081 1287.6 1368.3 460 3.55 1 FALSE 1.14E-05 0.0001304 0.835 -250 110315 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIVEESVTGVHR [RK].gIVEESVTGVHR.[L] N-Term(TMT6plex) 7 Q80SW1 S-adenosylhomocysteine hydrolase-like protein 1 OS=Mus musculus OX=10090 GN=Ahcyl1 PE=1 SV=1 Q80SW1; Q68FL4; F8WGT1; F8WI65; H3BKT5; Q80TQ9; Q68FL4-2 S-adenosylhomocysteine hydrolase-like protein 1 OS=Mus musculus OX=10090 GN=Ahcyl1 PE=1 SV=1; Putative adenosylhomocysteinase 3 OS=Mus musculus OX=10090 GN=Ahcyl2 PE=1 SV=1; Putative adenosylhomocysteinase 3 OS=Mus musculus OX=10090 GN=Ahcyl2 PE=1 SV=1; Adenosylhomocysteinase 3 isoform 4 OS=Mus musculus OX=10090 GN=Ahcyl2 PE=1 SV=1; Putative adenosylhomocysteinase 3 OS=Mus musculus OX=10090 GN=Ahcyl2 PE=1 SV=1; Adenosylhomocysteinase (Fragment) OS=Mus musculus OX=10090 GN=Ahcyl2 PE=2 SV=1; Isoform 2 of Putative adenosylhomocysteinase 3 OS=Mus musculus OX=10090 GN=Ahcyl2 0 3 3 0.7734 0 1 1 1 504.61807 1511.83966 1511.83792 1.15 0.00058 0/0 0 0 19251894 HCD 30 MS2 47.53403 1000.3 90.346 73.0277 22263 22263 22258 QEplus033719.raw F4 993.8 903.7 1080.7 886.4 1101.9 1035.6 318 5.56 1 FALSE 1.14E-05 1.50E-09 1.774 -250 110320 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KNLEQTVK [K].kNLEQTVk.[D] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 8 Q5SX40; P13541 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 Q9ESW6; Q5SX40; P13541; B2RWX0; Q3UW38; B1AR69; M0QWL0; Q3TT35 "Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin_tail_1 domain-containing protein OS=Mus musculus OX=10090 GN=Myh13 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin, heavy polypeptide 13, skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Myh13 PE=4 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1" 1 3 3 0.4186 0 1 1 1 549.68591 1647.04319 1647.04082 1.44 0.00079 0/0 0 0 18235468 HCD 30 MS2 45.05911 1551.1 68.756 73.03 22264 22264 22258 QEplus033719.raw F4 1689.7 739.8 1412.1 2754.8 764 1946.5 305 3.44 2 FALSE 1.14E-05 0.0001972 0.801 -250 110330 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVEELNK [K].tVEELNk.[S] N-Term(TMT6plex); K7(TMT6plex) 8 Q922J3 CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1 Q922J3-2; Q922J3; D3Z3M7; F7CB97; F6RCU2; F8WIA1; Q9QZF4; D3Z2Z1 Isoform 2 of CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1; CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; CAP-Gly domain-containing linker protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; CAP-Gly domain-containing linker protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1; Cytoplasmic linker protein 50 OS=Mus musculus OX=10090 GN=Clip1 PE=2 SV=1; CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1 0 2 2 0.0133 0 1 1 1 645.8877 1290.76811 1290.76694 0.91 0.00059 0/0 0 0 15231999 HCD 30 MS2 24.05742 1504.4 110 73.0325 22265 22265 22258 QEplus033719.raw F4 1540.6 1199.6 1557.6 1380.8 1580 1767.9 518 2.25 1 FALSE 0.004906 0.08588 0.046 -250 110340 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLDSVAK [K].tLDSVAk.[E] N-Term(TMT6plex); K7(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 D3YUF7; P48678; P48678-2 Prelamin-A/C (Fragment) OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=1; Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 0 3 3 0.2764 0 1 1 1 397.91705 1191.73661 1191.73491 1.42 0.00057 0/0 0 0 6725979 HCD 30 MS2 41.96149 526 110 73.035 22266 22266 22258 QEplus033719.raw F4 589.4 429.7 538 419.7 655.3 524.1 298 2.46 1 FALSE 0.001142 0.01538 0.328 -250 110349 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ACVAGTSDAEAVK [K].acVAGTSDAEAVk.[V] N-Term(TMT6plex); C2(Carbamidomethyl); K13(TMT6plex) 34 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q6A0E9; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; MKIAA0004 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0004 PE=4 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 2 2 0.7782 0 1 1 1 868.96808 1736.92888 1736.92531 2.06 0.00179 0/0 0 0 3477275.75 HCD 30 MS2 0 324.7 110 73.0375 22267 22267 22258 QEplus033719.raw F4 299.1 296 399.8 282.5 311.2 359.8 344 5.41 1 FALSE 1.14E-05 3.93E-14 2.644 -250 110355 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LFDDSDER [K].lFDDSDER.[G] N-Term(TMT6plex) 1 Q8BGC0 HIV Tat-specific factor 1 homolog OS=Mus musculus OX=10090 GN=Htatsf1 PE=1 SV=1 Q8BGC0 HIV Tat-specific factor 1 homolog OS=Mus musculus OX=10090 GN=Htatsf1 PE=1 SV=1 0 2 2 0.6376 0 1 1 1 613.29926 1225.59123 1225.58981 1.16 0.00071 0/0 0 0 3752387.5 HCD 30 MS2 36.92988 816.6 110 73.04 22268 22268 22258 QEplus033719.raw F4 833 673.1 830.8 657.7 1048.3 856.9 70 2.18 1 FALSE 0.0003211 0.006318 0.472 -250 110386 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDSPDLPK [K].dDSPDLPk.[L] N-Term(TMT6plex); K8(TMT6plex) 1 P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor 0 2 2 0.328 0 1 1 1 672.87518 1344.74309 1344.74112 1.47 0.00099 0/0 0 0 21107062 HCD 30 MS2 45.10844 1047.4 84.879 73.0564 22274 22274 22269 QEplus033719.raw F4 1093.5 440.2 605.3 330.8 3298.3 516.1 358 3.14 1 TRUE 0.0003996 0.007035 0.457 -250 110395 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQLSGEGAK [R].mQLSGEGAk.[T] N-Term(TMT6plex); K9(TMT6plex) 3 Q5SX53 Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc25a11 PE=1 SV=1 Q5SX53; Q5SX46; Q5SX48 Uncharacterized protein OS=Mus musculus OX=10090 GN=Slc25a11 PE=1 SV=1; Mitochondrial 2-oxoglutarate/malate carrier protein (Fragment) OS=Mus musculus OX=10090 GN=Slc25a11 PE=1 SV=1; Mitochondrial 2-oxoglutarate/malate carrier protein (Fragment) OS=Mus musculus OX=10090 GN=Slc25a11 PE=1 SV=1 0 2 2 0.4706 0 1 1 1 689.89258 1378.77788 1378.77646 1.03 0.00071 0/0 0 0 19130324 HCD 30 MS2 13.50955 1191.9 110 73.0589 22275 22275 22269 QEplus033719.raw F4 1165.1 916 1297.4 1274.5 1086.1 1412.3 455 3.57 1 FALSE 0.0001401 0.003243 0.55 -250 110402 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NADELVK [K].nADELVk.[Q] N-Term(TMT6plex); K7(TMT6plex) 2 P11983 T-complex protein 1 subunit alpha OS=Mus musculus OX=10090 GN=Tcp1 PE=1 SV=3 P11983-2; P11983 Isoform 2 of T-complex protein 1 subunit alpha OS=Mus musculus OX=10090 GN=Tcp1; T-complex protein 1 subunit alpha OS=Mus musculus OX=10090 GN=Tcp1 PE=1 SV=3 0 3 3 0.4249 0 1 1 1 416.2518 1246.74085 1246.74072 0.1 0.00004 0/0 0 0 17388600 HCD 30 MS2 47.32259 578.5 50.795 73.0611 22276 22276 22269 QEplus033719.raw F4 641.8 449.7 632.2 481.8 594.4 671.3 619 2.73 1 FALSE 0.0008268 0.01139 0.382 -250 110408 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPSEVPTPK [K].ePSEVPTPk.[R] N-Term(TMT6plex); K9(TMT6plex) 7 A0A384DV79; A0A338P6F6 High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1;High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1 A0A338P6E8; A0A384DV79; A0A338P6F6; Q566K0; A0A338P6G6; Q3TVP0; Q3TE85 High mobility group AT-hook protein 1 OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1; High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1; High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1; High mobility group AT-hook protein 1 OS=Mus musculus OX=10090 GN=Hmga1 PE=2 SV=1; High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; High mobility group protein HMG-I/HMG-Y OS=Mus musculus OX=10090 GN=Hmga1 PE=1 SV=1 0 3 3 0.2559 0 1 1 1 481.28372 1441.83661 1441.83027 4.4 0.00212 0/0 0 0 14507189 HCD 30 MS2 52.1971 1331.2 109.301 73.0636 22277 22277 22269 QEplus033719.raw F4 1472.6 1008.4 1380.6 1192.4 1335.3 1597.6 340 2.11 2 FALSE 0.007299 0.1168 -0.035 -250 110415 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLQSEPLPER [R].tLQSEPLPER.[L] N-Term(TMT6plex) 14 Q3TJ07 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1 Q3TJ07; V9GX87; Q641P2; A2A5R8; Q9Z108; Q3TWA1; Q3U7A6; Q3UKX3; Q6TNG5; Q3UTC8; A2A5S3; Q3TWP5; Q3TU43; Q9DBE7 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus OX=10090 GN=Stau1 PE=1 SV=1; Stau1 protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus OX=10090 GN=Stau1 PE=1 SV=1; Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus OX=10090 GN=Stau1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Staufen OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus OX=10090 GN=Stau1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Stau1 PE=2 SV=1; Double-stranded RNA-binding protein Staufen homolog 1 OS=Mus musculus OX=10090 GN=Stau1 PE=1 SV=1 0 2 2 0.5174 0 1 1 1 699.89459 1398.78191 1398.77901 2.07 0.00145 0/0 0 0 10914633 HCD 30 MS2 16.34244 603.3 110 73.0661 22278 22278 22269 QEplus033719.raw F4 602.1 492.8 625.8 500.7 763.5 635 298 3.17 1 FALSE 0.0002218 0.004598 0.511 -250 110424 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDPDTISR [K].lDPDTISR.[G] N-Term(TMT6plex) 4 Q5SX75 Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha2 PE=1 SV=1 Q5SX75; Q60716; B0QZH3; Q5SX74 Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha2 PE=1 SV=1; Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus OX=10090 GN=P4ha2 PE=1 SV=1; Prolyl 4-hydroxylase subunit alpha-2 (Fragment) OS=Mus musculus OX=10090 GN=P4ha2 PE=1 SV=1; Procollagen-proline 4-dioxygenase OS=Mus musculus OX=10090 GN=P4ha2 PE=2 SV=1 0 2 2 0.3849 0 1 1 1 573.32251 1145.63774 1145.63637 1.2 0.00069 0/0 0 0 10840717 HCD 30 MS2 23.31058 1053.9 110 73.0686 22279 22279 22269 QEplus033719.raw F4 1050.1 928.7 996.8 877.5 1364 1106.1 337 2.39 1 FALSE 0.001318 0.01813 0.298 -250 110433 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GASQAGMTGYGMPR [RK].gASQAGMTGYGMPR.[Q] N-Term(TMT6plex) 3 Q9WVA4; Q9R1Q8 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4;Transgelin-3 OS=Mus musculus OX=10090 GN=Tagln3 PE=1 SV=1 Q9WVA4; Q9D6K2; Q9R1Q8 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4; Transgelin OS=Mus musculus OX=10090 GN=Tagln3 PE=2 SV=1; Transgelin-3 OS=Mus musculus OX=10090 GN=Tagln3 PE=1 SV=1 0 2 2 0.8303 0 1 1 1 806.89301 1612.77873 1612.77731 0.88 0.00071 0/0 0 0 17767550 HCD 30 MS2 10.65842 643.3 110 73.076 22281 22281 22280 QEplus033719.raw F4 661.8 672.3 662.5 435.3 895.3 532.8 94 5.54 2 FALSE 1.14E-05 7.28E-14 2.593 -250 110441 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCTEETHGFICQK [R].scTEETHGFIcQk.[G] N-Term(TMT6plex); C2(Carbamidomethyl); C11(Carbamidomethyl); K13(TMT6plex) 2 Q14AX9 "Mannose receptor, C type 2 OS=Mus musculus OX=10090 GN=Mrc2 PE=2 SV=1" Q14AX9; Q64449 "Mannose receptor, C type 2 OS=Mus musculus OX=10090 GN=Mrc2 PE=2 SV=1; C-type mannose receptor 2 OS=Mus musculus OX=10090 GN=Mrc2 PE=1 SV=3" 0 3 3 0.7839 0 1 1 1 685.67328 2055.00528 2055.00397 0.64 0.00044 0/0 0 0 8592857 HCD 30 MS2 0 486 110 73.0785 22282 22282 22280 QEplus033719.raw F4 474.9 444.3 568.8 427.4 560.9 439.8 148 5.97 1 FALSE 1.14E-05 5.74E-15 2.802 -250 110446 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IQEYEK [R].iQEYEk.[Q] N-Term(TMT6plex); K6(TMT6plex) 2 Q9DCX2 "ATP synthase subunit d, mitochondrial OS=Mus musculus OX=10090 GN=Atp5pd PE=1 SV=3" Q9DCX2; B1ASE2 "ATP synthase subunit d, mitochondrial OS=Mus musculus OX=10090 GN=Atp5pd PE=1 SV=3; ATP synthase subunit d, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Atp5h PE=1 SV=1" 0 2 2 0.3333 0 1 1 1 634.36957 1267.73186 1267.72982 1.61 0.00102 0/0 0 0 89056232 HCD 30 MS2 13.15855 1357.6 21.813 73.0808 22283 22283 22280 QEplus033719.raw F4 1364.7 1019.8 1405.4 1568.1 1186.9 1600.8 346 2.82 1 FALSE 0.004288 0.07851 0.065 -250 110464 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVELQGK [K].tVELQGk.[K] N-Term(TMT6plex); K7(TMT6plex) 2 Q4FJL0 Rab10 OS=Mus musculus OX=10090 GN=Rab10 PE=1 SV=1 Q4FJL0; Q3U621 Rab10 OS=Mus musculus OX=10090 GN=Rab10 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab10 PE=2 SV=1 0 2 2 0.3146 0 1 1 1 616.88531 1232.76335 1232.76146 1.54 0.00095 0/0 0 0 19878806 HCD 30 MS2 38.34081 1741.4 110 73.0878 22286 22286 22280 QEplus033719.raw F4 1903.6 1316.8 1756.4 1892.5 1614.2 1964.9 473 3.02 1 FALSE 0.0001401 0.003211 0.551 -250 110481 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITVEDSDK [R].iTVEDSDk.[H] N-Term(TMT6plex); K8(TMT6plex) 6 Q3URM1 ANK_REP_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Clpb PE=1 SV=1 Q3URM1; E9PY58; Q8CCN6; Q3UGS9; Q3U3U6; Q3TXD4 ANK_REP_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Clpb PE=1 SV=1; Caseinolytic peptidase B protein homolog OS=Mus musculus OX=10090 GN=Clpb PE=1 SV=1; Caseinolytic peptidase B protein homolog OS=Mus musculus OX=10090 GN=Clpb PE=1 SV=1; ANK_REP_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Clpb PE=2 SV=1; ANK_REP_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Clpb PE=2 SV=1; ANK_REP_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Clpb PE=2 SV=1 0 2 2 0.2125 0 1 1 1 682.89203 1364.77678 1364.76733 6.92 0.00472 0/0 0 0 10947135 HCD 30 MS2 32.19938 1034.1 110 73.0929 22288 22288 22280 QEplus033719.raw F4 1131.5 746.5 1051.2 911.6 1189.9 1173.8 445 2.4 1 FALSE 0.0002019 0.004227 0.521 -250 110488 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WCHDNGVNYK [K].wcHDNGVNYk.[I] N-Term(TMT6plex); C2(Carbamidomethyl); K10(TMT6plex) 14 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q99KD0; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.8428 0 1 1 1 584.29626 1750.87424 1750.87355 0.4 0.00023 0/0 0 0 6795803.5 HCD 30 MS2 43.06389 1039.4 110 73.0954 22289 22289 22280 QEplus033719.raw F4 1118.8 826.9 1146.9 1063 949.7 1130.8 180 5.47 3 FALSE 1.14E-05 1.91E-08 1.564 -250 110493 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAPLNTPVTEDR [K].gAPLNTPVTEDR.[F] N-Term(TMT6plex) 2 Q921G7 "Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Mus musculus OX=10090 GN=Etfdh PE=1 SV=1" Q921G7; Q6PF96 "Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Mus musculus OX=10090 GN=Etfdh PE=1 SV=1; Electron transfer flavoprotein-ubiquinone oxidoreductase OS=Mus musculus OX=10090 GN=Etfdh PE=1 SV=1" 0 2 2 0.5755 0 1 1 1 749.90869 1498.81011 1498.80629 2.55 0.00191 0/0 0 0 6347770.5 HCD 30 MS2 14.73096 378 110 73.0979 22290 22290 22280 QEplus033719.raw F4 395.6 323.1 394.8 368.1 373 413.5 322 3.51 1 FALSE 1.14E-05 7.46E-09 1.641 -250 110509 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLEEEVK [R].qLEEEVk.[A] N-Term(TMT6plex); K7(TMT6plex) 4 B2RY26 Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1 G3UW82; I6L963; B2RY26; B2RXX9 "Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1" 0 2 2 0.2112 0 1 1 1 666.89417 1332.78105 1332.7775 2.66 0.00178 0/0 0 0 7157516.5 HCD 30 MS2 16.35378 728.5 110 73.1077 22293 22293 22291 QEplus033719.raw F4 868.5 349.5 611.8 1237 422.6 881.4 512 2.32 1 FALSE 0.0008991 0.01243 0.367 -250 110517 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQPGSVKK [K].lQPGSVkk.[V] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 8 B2RSH3; Q9DAW9 Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=2 SV=1;Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1 B2RSH3; Q9DAW9; A0A1L1SRV0; Q08091-2; A0A1L1SRL1; A0A1L1SUB2; A0A0G2JDV8; Q8CBQ2 Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=2 SV=1; Calponin-3 OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=1 SV=1; Isoform Beta of Calponin-1 OS=Mus musculus OX=10090 GN=Cnn1; Calponin-1 (Fragment) OS=Mus musculus OX=10090 GN=Cnn1 PE=1 SV=1; Calponin (Fragment) OS=Mus musculus OX=10090 GN=Cnn1 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn3 PE=1 SV=1; Calponin OS=Mus musculus OX=10090 GN=Cnn1 PE=2 SV=1 1 3 3 0.3817 0 1 1 1 515.34357 1544.01615 1544.01387 1.47 0.00076 0/0 0 0 103902296 HCD 30 MS2 8.730657 1264.4 20.517 73.11 22294 22294 22291 QEplus033719.raw F4 1350.5 1034.9 1289.3 747.2 2162.9 1001.5 135 2.41 2 FALSE 0.001903 0.03243 0.205 -250 110533 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAEDDEDDDVDTKK [R].vAEDDEDDDVDTkk.[Q] N-Term(TMT6plex); K13(TMT6plex); K14(TMT6plex) 6 Q8C2T3 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1 Q8C2T3; P26350; Q3U8X6; Q3U6E4; Q8CAQ5; Q3UA54 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Prothymosin alpha OS=Mus musculus OX=10090 GN=Ptma PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1 1 3 3 0.7916 0 1 1 1 761.05963 2281.16434 2281.16503 -0.3 -0.00023 0/0 0 0 22311394 HCD 30 MS2 2.955611 1137.5 110 73.1148 22296 22296 22291 QEplus033719.raw F4 1185.7 1742.6 1134.5 559.6 1508 694.8 329 4.75 1 FALSE 1.14E-05 6.31E-16 3.208 -250 110542 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KDEDVLK [K].kDEDVLk.[K] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 7 Q3UVN0 RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1 Q3TPL7; Q3U837; Q3UVN0; Q3TIE4; Q3T9L0; D6RHT5; Q8VDW0 RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=1 SV=1; ATP-dependent RNA helicase DDX39A OS=Mus musculus OX=10090 GN=Ddx39a PE=1 SV=1 1 3 3 0.2804 0 1 1 1 511.98718 1533.94699 1533.94552 0.96 0.00049 0/0 0 0 21165486 HCD 30 MS2 20.96103 1380.3 80.996 73.117 22297 22297 22291 QEplus033719.raw F4 1496.7 1093.8 1340.9 1582.7 1429.8 1338.2 327 2.71 1 FALSE 5.44E-05 0.001943 0.601 -250 110552 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATPLPAEGK [K].aTPLPAEGk.[IKST] N-Term(TMT6plex); K9(TMT6plex) 11 O70318 Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2 Q811B2; B6ZHC6; O70318; B6ZHD0; Q80UE5; Q811C0; Q80UE3; Q80UE4; B6ZHC5; Q8C928; Q3UNQ6 Epb4.1l2 protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; 4.1G protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Protein 4.1G OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1 0 2 2 0.6239 0 1 1 1 671.41144 1341.8156 1341.81422 1.03 0.00069 0/0 0 0 20653510 HCD 30 MS2 14.23479 1036.8 110 73.1195 22298 22298 22291 QEplus033719.raw F4 947.5 1097.7 1255.2 706.2 1230.9 983.1 244 3.43 1 FALSE 1.14E-05 2.91E-06 1.149 -250 110571 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAAVQPPEEGPSRK [K].vAAVQPPEEGPSRk.[D] N-Term(TMT6plex); K14(TMT6plex) 7 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 3 3 0.5619 0 1 1 1 641.70782 1923.10892 1923.10638 1.32 0.00085 0/0 0 0 10605363 HCD 30 MS2 15.79024 1121.5 110 73.1243 22300 22300 22291 QEplus033719.raw F4 1085.7 914.9 1254.6 1025.6 1068.7 1379.5 407 4.93 1 FALSE 1.14E-05 1.05E-09 1.803 -250 110580 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTYLENEK [K].dTYLENEk.[L] N-Term(TMT6plex); K8(TMT6plex) 5 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q99LY0; Q91YQ5; Q5RKP4; Q3U900; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 0 2 2 0.6261 0 1 1 1 735.39868 1469.79009 1469.7888 0.88 0.00065 0/0 0 0 14297404 HCD 30 MS2 30.5461 1090.7 110 73.1268 22301 22301 22291 QEplus033719.raw F4 1087.8 962.1 1204.7 984.5 1202.6 1102.6 271 3.37 1 FALSE 1.14E-05 0.0001767 0.81 -250 110588 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGNGTVMGAEIR [K].eGNGTVMGAEIR.[H] N-Term(TMT6plex) 5 A0A1W2P6F6 Myosin light polypeptide 6 OS=Mus musculus OX=10090 GN=Myl6 PE=1 SV=1 A0A1W2P6G5; A0A1W2P6F6; A0A1W2P7Q9; Q60605; Q60605-2 Myosin light polypeptide 6 OS=Mus musculus OX=10090 GN=Myl6 PE=1 SV=1; Myosin light polypeptide 6 OS=Mus musculus OX=10090 GN=Myl6 PE=1 SV=1; Myosin light polypeptide 6 OS=Mus musculus OX=10090 GN=Myl6 PE=1 SV=1; Myosin light polypeptide 6 OS=Mus musculus OX=10090 GN=Myl6 PE=1 SV=3; Isoform Smooth muscle of Myosin light polypeptide 6 OS=Mus musculus OX=10090 GN=Myl6 0 2 2 0.6052 0 1 1 1 731.88055 1462.75383 1462.75214 1.15 0.00084 0/0 0 0 33289342 HCD 30 MS2 0 715.4 110 73.1367 22304 22304 22302 QEplus033719.raw F4 900.4 152.5 514 1416.8 191.5 1117.3 217 4.61 1 FALSE 1.14E-05 1.43E-10 1.968 -250 110589 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGNGTVMGAELR [K].eGNGTVMGAELR.[H] N-Term(TMT6plex) 9 Q545T7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Myl1 PE=2 SV=1 A0A0G2JDM3; Q61935; Q6PCW9; Q545G5; P09542; Q545T7; A0A087WRZ7; E9PWG4; A0A0G2JDW2 "Myosin light chain 3 OS=Mus musculus OX=10090 GN=Myl3 PE=1 SV=1; Ventricular alkali myosin light chain (Fragment) OS=Mus musculus OX=10090 GN=Myl3 PE=2 SV=1; Myl1 protein OS=Mus musculus OX=10090 GN=Myl1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myl1 PE=2 SV=1; Myosin light chain 3 OS=Mus musculus OX=10090 GN=Myl3 PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myl1 PE=2 SV=1; Myosin light chain 1/3, skeletal muscle isoform OS=Mus musculus OX=10090 GN=Myl1 PE=1 SV=1; Myosin light chain 1/3, skeletal muscle isoform OS=Mus musculus OX=10090 GN=Myl1 PE=1 SV=1; Myosin light chain 3 (Fragment) OS=Mus musculus OX=10090 GN=Myl3 PE=1 SV=1" 0 2 2 0.6052 0 1 2 2 731.88055 1462.75383 1462.75214 1.15 0.00084 0/0 0 0 33289342 HCD 30 MS2 0 715.4 110 73.1367 22304 22304 22302 QEplus033719.raw F4 900.4 152.5 514 1416.8 191.5 1117.3 217 4.61 2 FALSE 1.14E-05 1.43E-10 1.968 -250 110594 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVVIVDDR [R].aVVIVDDR.[G] N-Term(TMT6plex) 10 Q8VIJ6; Q3TMM5; Q3UM20 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1" Q8VIJ6; Q3TMM5; Q3TZL2; Q9Z1Q0; Q99K48-2; Q3TTV7; Q3TFC2; Q3UM20; Q3TF40; Q99K48 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1; PTB-associated splicing factor (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1; Isoform 2 of Non-POU domain-containing octamer-binding protein OS=Mus musculus OX=10090 GN=Nono; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nono PE=2 SV=1; Non-POU domain-containing octamer-binding protein OS=Mus musculus OX=10090 GN=Nono PE=1 SV=3" 0 2 2 0.3941 0 1 1 1 558.33527 1115.66326 1115.66219 0.96 0.00053 0/0 0 0 84287256 HCD 30 MS2 16.35949 583.9 18.157 73.1389 22305 22305 22302 QEplus033719.raw F4 513.2 591.5 663.2 394 727.4 614.1 298 3.07 3 FALSE 1.14E-05 7.74E-05 0.878 -250 110608 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ACVAGTSDAEAVK [K].acVAGTSDAEAVk.[V] N-Term(TMT6plex); C2(Carbamidomethyl); K13(TMT6plex) 34 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q6A0E9; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; MKIAA0004 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0004 PE=4 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 3 3 0.7117 0 1 1 1 579.64801 1736.92948 1736.92531 2.4 0.00139 0/0 0 0 15588014 HCD 30 MS2 32.45871 1321.6 110 73.1462 22308 22308 22302 QEplus033719.raw F4 1533.1 960.4 1311.9 1242.5 1396.6 1485.1 348 4.44 1 FALSE 1.14E-05 3.19E-10 1.901 -250 110613 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQAEGLSPR [K].lQAEGLSPR.[F] N-Term(TMT6plex) 2 B2RXY7 Carbonyl reductase 1 OS=Mus musculus OX=10090 GN=Cbr1 PE=1 SV=1 B2RXY7; A0A338P684 Carbonyl reductase 1 OS=Mus musculus OX=10090 GN=Cbr1 PE=1 SV=1; Carbonyl reductase [NADPH] 1 OS=Mus musculus OX=10090 GN=Cbr1 PE=1 SV=1 0 2 2 0.5885 0 1 1 1 600.35132 1199.69536 1199.69455 0.67 0.0004 0/0 0 0 12693370 HCD 30 MS2 38.23265 1457.1 110 73.1487 22309 22309 22302 QEplus033719.raw F4 1409.9 1261.4 1703.6 1404.3 1269.1 1694 281 2.6 1 FALSE 1.14E-05 7.04E-05 0.886 -250 110621 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVMDDLDR [K].kVMDDLDR.[A] N-Term(TMT6plex); K1(TMT6plex) 6 Q6XMP4 Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1 Q6XMP4; Q8R346; Q8BGQ7; Q6PDM7; Q3TZ32; Q3UD67 "Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=2; Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1" 1 2 2 0.5776 0 1 1 1 725.41235 1449.81743 1449.81357 2.66 0.00193 0/0 0 0 7937063.5 HCD 30 MS2 0 398.4 110 73.1512 22310 22310 22302 QEplus033719.raw F4 424.6 374.4 422.6 335.7 440.8 392 429 3.03 1 FALSE 1.14E-05 0.0001626 0.817 -250 110629 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCLALADDRK [K].ncLALADDRk.[L] N-Term(TMT6plex); C2(Carbamidomethyl); K10(TMT6plex) 2 Q9QZQ8 Core histone macro-H2A.1 OS=Mus musculus OX=10090 GN=Macroh2a1 PE=1 SV=3 Q9QZQ8-2; Q9QZQ8 Isoform 1 of Core histone macro-H2A.1 OS=Mus musculus OX=10090 GN=Macroh2a1; Core histone macro-H2A.1 OS=Mus musculus OX=10090 GN=Macroh2a1 PE=1 SV=3 1 3 3 0.6209 0 1 1 1 545.30847 1633.91086 1633.9096 0.77 0.00042 0/0 0 0 34750748 HCD 30 MS2 46.20868 1262.5 43.752 73.1535 22311 22311 22302 QEplus033719.raw F4 1291.1 1047.3 1338 1262.6 1200 1435.9 431 3.64 1 FALSE 1.14E-05 8.07E-11 2.015 -250 110665 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GASQAGMTGYGMPR [RK].gASQAGMTGYGMPR.[Q] N-Term(TMT6plex) 3 Q9WVA4; Q9R1Q8 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4;Transgelin-3 OS=Mus musculus OX=10090 GN=Tagln3 PE=1 SV=1 Q9WVA4; Q9D6K2; Q9R1Q8 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4; Transgelin OS=Mus musculus OX=10090 GN=Tagln3 PE=2 SV=1; Transgelin-3 OS=Mus musculus OX=10090 GN=Tagln3 PE=1 SV=1 0 3 3 0.7973 0 1 1 1 538.26447 1612.77884 1612.77731 0.95 0.00051 0/0 0 0 40097000 HCD 30 MS2 51.90031 729.5 28.193 73.1721 22318 22318 22313 QEplus033719.raw F4 722.6 641.1 753.1 619.7 950.8 689.9 93 4.39 2 FALSE 1.14E-05 2.37E-09 1.736 -250 110680 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQTEAGELSR [R].lQTEAGELSR.[Q] N-Term(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 0 2 2 0.5835 0 1 1 1 666.86981 1332.73235 1332.73206 0.22 0.00014 0/0 0 0 18293426 HCD 30 MS2 23.99089 849.9 85.959 73.1766 22320 22320 22313 QEplus033719.raw F4 973.1 220 655.4 1653.8 280.6 1316.2 349 3.89 1 FALSE 1.14E-05 2.67E-08 1.536 -250 110689 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAEDDEDDDVDTKK [R].vAEDDEDDDVDTkk.[Q] N-Term(TMT6plex); K13(TMT6plex); K14(TMT6plex) 6 Q8C2T3 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1 Q8C2T3; P26350; Q3U8X6; Q3U6E4; Q8CAQ5; Q3UA54 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Prothymosin alpha OS=Mus musculus OX=10090 GN=Ptma PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ptma PE=2 SV=1 1 4 4 0.777 0 1 1 1 571.04742 2281.16787 2281.16503 1.25 0.00071 0/0 0 0 14763713 HCD 30 MS2 38.32336 1514.1 110 73.1791 22321 22321 22313 QEplus033719.raw F4 1546.1 1829.4 1559.3 980.9 1931.2 1237.9 348 4.35 1 FALSE 1.14E-05 6.67E-06 1.081 -250 110695 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLANSEPVGTQTAK [K].kLANSEPVGTQTAk.[I] N-Term(TMT6plex); K1(TMT6plex); K14(TMT6plex) 11 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 B1ARU4; E9QA63; E9QNP1; F7ACR9; Q3TRV6; A0A571BGC6; A0A286YD76; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 1 3 3 0.6508 0 1 1 1 711.09631 2131.27439 2131.26898 2.54 0.0018 0/0 0 0 3904529.25 HCD 30 MS2 16.57613 326.5 110 73.1816 22322 22322 22313 QEplus033719.raw F4 336.3 191.9 397.9 308 246.4 478.7 340 6.1 3 FALSE 1.14E-05 6.31E-16 3.319 -250 110702 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAEIEHAEK [K].vAEIEHAEk.[E] N-Term(TMT6plex); K9(TMT6plex) 2 Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 Q9JJD8; Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=2 SV=1; CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 0 3 3 0.5669 0 1 1 1 495.28949 1483.85392 1483.85206 1.25 0.00062 0/0 0 0 55475312 HCD 30 MS2 32.90387 1149.1 27.022 73.1839 22323 22323 22313 QEplus033719.raw F4 1248.8 765.6 1182.7 939.9 1068.8 1689 359 4.71 1 FALSE 1.14E-05 1.76E-07 1.381 -250 110719 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LHPFHVIR [R].lHPFHVIR.[I] N-Term(TMT6plex) 7 A2AM97 Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1 P86048; A0A1B0GXC3; I7HLV2; Q3THJ6; A2AM97; B7FAU6; O89059 60S ribosomal protein L10-like OS=Mus musculus OX=10090 GN=Rpl10l PE=2 SV=1; 60S ribosomal protein L10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=4 SV=1; 60S ribosomal protein L10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=1 SV=1; Ribosomal_L16 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Ribosomal protein 10 OS=Mus musculus OX=10090 GN=RP23-436K3.4-001 PE=4 SV=1; Ribosomal protein 10 (Fragment) OS=Mus musculus OX=10090 GN=Rpl10 PE=4 SV=1; QM protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 0 3 3 0.6394 0 1 1 1 416.59091 1247.75818 1247.75743 0.61 0.00025 0/0 0 0 22244584 HCD 30 MS2 38.27885 417.6 48.385 73.1934 22326 22326 22324 QEplus033719.raw F4 436.1 307.9 496.4 333.4 372 559.6 393 3.91 1 FALSE 1.14E-05 2.46E-06 1.163 -250 110729 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVRPDYLK [K].nVRPDYLk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 P09671 "Superoxide dismutase [Mn], mitochondrial OS=Mus musculus OX=10090 GN=Sod2 PE=1 SV=3" Q3TJA2; P09671; Q3U8W4 "Superoxide dismutase OS=Mus musculus OX=10090 GN=Sod2 PE=2 SV=1; Superoxide dismutase [Mn], mitochondrial OS=Mus musculus OX=10090 GN=Sod2 PE=1 SV=3; Superoxide dismutase OS=Mus musculus OX=10090 GN=Sod2 PE=2 SV=1" 0 3 3 0.5164 0 1 1 1 488.29813 1462.87983 1462.87822 1.1 0.00054 0/0 0 0 62540324 HCD 30 MS2 20.49943 979.5 27.032 73.1957 22327 22327 22324 QEplus033719.raw F4 1063.5 685.5 1101.8 1185.7 713.2 1127.3 466 3.04 1 FALSE 0.0005556 0.008419 0.431 -250 110736 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTLTPEEEAR [K].vTLTPEEEAR.[L] N-Term(TMT6plex) 9 A0A1B0GSX0 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1 Q3TI99; Q3THB4; Q3UIC3; Q3UDU4; Q99K20; A0A1B0GSR9; Q3TCI7; A0A1B0GSX0; P06151 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3 0 2 2 0.5788 0 1 1 1 687.37823 1373.74919 1373.74738 1.32 0.00091 0/0 0 0 25784144 HCD 30 MS2 0 793.6 110 73.1982 22328 22328 22324 QEplus033719.raw F4 888.2 671.1 770.4 765.2 853.2 813.3 319 4.06 1 FALSE 1.14E-05 9.56E-05 0.861 -250 110742 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQNVLGEK [R].tQNVLGEk.[G] N-Term(TMT6plex); K8(TMT6plex) 7 Q5YLW3 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1 Q9D0A2; D3YV43; Q9CZP6; Q3UCL7; Q5YLW3; Q3UK56; A0A140LI77 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1 0 2 2 0.397 0 1 1 1 673.90808 1346.80889 1346.80439 3.34 0.00225 0/0 0 0 20245900 HCD 30 MS2 15.45754 1346.2 91.408 73.2005 22329 22329 22324 QEplus033719.raw F4 1424.3 1091.1 1384.1 944.2 1950.9 1282.8 469 3.35 1 FALSE 1.14E-05 0.0001477 0.825 -250 110750 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPADLPK [K].nPADLPk.[L] N-Term(TMT6plex); K7(TMT6plex) 17 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q3TSK4; Q8C153; P58252; O89070; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3TPG2; Q3UZ14; Q3TK17; Q3TLB1; Q3TWX1; Q3TX47 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Elongation factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 0 2 2 0.5256 0 1 1 1 606.87158 1212.73589 1212.73524 0.53 0.00032 0/0 0 0 19430420 HCD 30 MS2 26.72677 1574.9 110 73.203 22330 22330 22324 QEplus033719.raw F4 1893.1 1182.3 1709 1275.2 1608.6 1781.3 211 2.34 1 FALSE 0.0005556 0.008262 0.434 -250 110754 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MSCTCLGNGK [R].mScTcLGNGk.[G] N-Term(TMT6plex); C3(Carbamidomethyl); C5(Carbamidomethyl); K10(TMT6plex) 14 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q99KD0; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.7787 0 1 1 1 793.39978 1585.79228 1585.79008 1.39 0.0011 0/0 0 0 15917312 HCD 30 MS2 6.783347 940.1 110 73.2055 22331 22331 22324 QEplus033719.raw F4 981.9 792.9 1157 1163.1 525.9 1019.6 164 4.61 3 FALSE 1.14E-05 6.53E-08 1.462 -250 110774 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNEDQSMGNWQIRR [K].sNEDQSMGNWQIRR.[Q] N-Term(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 1 3 3 0.7359 0 1 1 1 650.65363 1949.94632 1949.94492 0.72 0.00047 0/0 0 0 8119408.5 HCD 30 MS2 15.67423 554.8 110 73.2105 22333 22333 22324 QEplus033719.raw F4 648.3 467.2 568.2 430.2 676.2 538.5 146 5.49 1 FALSE 1.14E-05 1.61E-14 2.717 -250 110783 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STTTGHLIYK [K].sTTTGHLIYk.[C] N-Term(TMT6plex); K10(TMT6plex) 7 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; P62631; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Mus musculus OX=10090 GN=Eef1a2 PE=1 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 0 2 2 0.4796 0 1 1 1 789.96802 1578.92876 1578.92556 2.02 0.0016 0/0 0 0 7637735.5 HCD 30 MS2 49.27272 379.3 110 73.213 22334 22334 22324 QEplus033719.raw F4 377.4 415.6 414.7 322.9 444.6 300.4 404 2.69 1 FALSE 1.14E-05 1.14E-07 1.416 -250 110789 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STTTGHLIYK [K].sTTTGHLIYk.[C] N-Term(TMT6plex); K10(TMT6plex) 7 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; P62631; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Mus musculus OX=10090 GN=Eef1a2 PE=1 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 0 3 3 0.6488 0 1 1 1 526.98059 1578.92722 1578.92556 1.05 0.00055 0/0 0 0 75942456 HCD 30 MS2 28.85241 678.6 18.989 73.2203 22336 22336 22335 QEplus033719.raw F4 721.9 553.6 651 709.4 972.3 463.6 418 2.99 1 FALSE 1.14E-05 0.0006035 0.706 -250 110793 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YSTSSSSGLTAGK [R].ySTSSSSGLTAGk.[I] N-Term(TMT6plex); K13(TMT6plex) 15 Q8CAQ8; A0A0U1RP81 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1;MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q8CAQ8-4; Q3U7N2; E9PVS5; Q8CAQ8; E9QAY6; Q8CAQ8-2; Q3TZK4; A0A0U1RP81; Q3TVZ5; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5; A0A1B0GX08 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; Isoform 4 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 0 2 2 0.8333 0 1 1 1 852.46552 1703.92375 1703.9216 1.26 0.00108 0/0 0 0 5367356.5 HCD 30 MS2 0 415 110 73.2229 22337 22337 22335 QEplus033719.raw F4 389.6 346.8 433.8 468.2 427.7 423.9 417 6.18 2 FALSE 1.14E-05 7.13E-15 2.784 -250 110807 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDPITGR [K].lDPITGR.[S] N-Term(TMT6plex) 9 Q60668; G5E8G0 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2;Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1 Q60668; F6ZV59; G5E8G0; Q60668-4; G3X9W0; Q60668-2; Q3UXC8; Q60668-3; E9Q5B6 Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein D0 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1; Isoform 4 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd; Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=2 SV=1; Isoform 3 of Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus OX=10090 GN=Hnrnpd; Heterogeneous nuclear ribonucleoprotein D0 (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpd PE=1 SV=1 0 2 2 0.2323 0 1 1 1 500.80356 1000.59984 1000.59886 0.98 0.00049 0/0 0 0 37410360 HCD 30 MS2 63.45373 821.8 23.695 73.2274 22339 22339 22335 QEplus033719.raw F4 864.3 753.9 899.3 630.9 956.4 826.2 183 2.54 2 FALSE 0.0009447 0.01283 0.361 -250 110822 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSVELCK [K].qSVELck.[K] N-Term(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex) 7 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 F6Z1R4; Q80U89; Q68FD5; Q5SXR6; Q3UPJ3; Q3TJ98; Q8K2I5 Clathrin heavy chain 1 (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1; Cltc protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1 0 2 2 0.3511 0 1 1 1 661.38025 1321.75322 1321.75499 -1.34 -0.00089 0/0 0 0 35669600 HCD 30 MS2 27.14735 1220.3 45.558 73.2319 22341 22341 22335 QEplus033719.raw F4 1187.4 1094.2 1412.3 1016.1 1303.8 1308 439 2.62 1 FALSE 0.001028 0.01334 0.354 -250 110831 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGTEEISPR [R].lGTEEISPR.[V] N-Term(TMT6plex) 4 Q9WTI7-3 Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c Q9WTI7; Q9WTI7-3; Q9WTI7-2; Q9WTI7-4 Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c PE=1 SV=2; Isoform 3 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Isoform 2 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c; Isoform 4 of Unconventional myosin-Ic OS=Mus musculus OX=10090 GN=Myo1c 0 2 2 0.5325 0 1 1 1 615.84888 1230.69048 1230.68913 1.09 0.00067 0/0 0 0 35053324 HCD 30 MS2 12.70118 839.2 63.393 73.2342 22342 22342 22335 QEplus033719.raw F4 800.8 751.9 985.3 719.3 812.8 965.3 350 3.08 1 FALSE 3.35E-05 0.00139 0.632 -250 110841 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QKPVLQK [K].qkPVLQk.[Y] N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex) 5 Q60597 "2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh PE=1 SV=3" Q60597-4; Q60597-3; Q60597-2; Q60597; Z4YJV4 "Isoform 4 of 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh; Isoform 3 of 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh; Isoform 2 of 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh; 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh PE=1 SV=3; Oxoglutarate dehydrogenase (succinyl-transferring) OS=Mus musculus OX=10090 GN=Ogdh PE=1 SV=1" 0 3 3 0.5866 0 1 1 1 510.01169 1528.02051 1528.01896 1.02 0.00052 0/0 0 0 29455104 HCD 30 MS2 21.05002 1525.5 73.314 73.2364 22343 22343 22335 QEplus033719.raw F4 1590.9 1119.1 1541 1744.4 1565 1592.8 55 2.83 1 FALSE 7.59E-05 0.002791 0.566 -250 110848 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETHNAAIIMK [K].eTHNAAIIMk.[I] N-Term(TMT6plex); K10(TMT6plex) 4 Q80X87 Glia maturation factor OS=Mus musculus OX=10090 GN=Gmfb PE=2 SV=1 Q80X87; A7VJ98; A0A2I3BPS1; Q9CQI3 Glia maturation factor OS=Mus musculus OX=10090 GN=Gmfb PE=2 SV=1; Glia maturation factor OS=Mus musculus OX=10090 GN=Gmfb PE=2 SV=1; Glia maturation factor beta (Fragment) OS=Mus musculus OX=10090 GN=Gmfb PE=1 SV=1; Glia maturation factor beta OS=Mus musculus OX=10090 GN=Gmfb PE=1 SV=3 0 3 3 0.719 0 1 1 1 529.30981 1585.91489 1585.91362 0.8 0.00042 0/0 0 0 29319516 HCD 30 MS2 53.42135 799.7 40.602 73.2387 22344 22344 22335 QEplus033719.raw F4 837.8 710.4 955.1 782.3 684.6 828 377 3.95 1 FALSE 1.14E-05 2.04E-07 1.369 -250 110855 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVQTSELK [K].eVQTSELk.[A] N-Term(TMT6plex); K8(TMT6plex) 12 O70318 Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2 Q811B2; O70318; B6ZHD0; Q80UE5; Q8CGJ6; Q80UE3; Q80UE4; A0A1W2P6I5; B6ZHC5; B6ZHC7; Q8C928; Q3UNQ6 Epb4.1l2 protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Epb4.1l2 protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Protein 4.1G OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1 0 3 3 0.3562 0 1 1 1 464.60999 1391.8154 1391.81462 0.57 0.00026 0/0 0 0 10644134 HCD 30 MS2 29.02826 1011.4 110 73.2412 22345 22345 22335 QEplus033719.raw F4 987.4 921 1166.2 745.6 1175.7 1072.6 424 3.79 1 FALSE 0.0007246 0.01045 0.397 -250 110862 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMVMVSPR [K].gMVMVSPR.[L] N-Term(TMT6plex) 2 O08582 GTP-binding protein 1 OS=Mus musculus OX=10090 GN=Gtpbp1 PE=1 SV=2 A0A2R8VHC2; O08582 GTP-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Gtpbp1 PE=1 SV=1; GTP-binding protein 1 OS=Mus musculus OX=10090 GN=Gtpbp1 PE=1 SV=2 0 2 2 0.325 0 1 1 1 553.3111 1105.61492 1105.60594 8.12 0.00449 0/0 0 0 8879829 HCD 30 MS2 54.31181 1619.5 100.899 73.2485 22347 22347 22346 QEplus033719.raw F4 1949.9 1164.4 1549.7 1506.5 1764.9 1781.5 305 2 1 FALSE 0.001343 0.01899 0.29 -250 110869 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DWEANACK [K].dWEANAck.[I] N-Term(TMT6plex); C7(Carbamidomethyl); K8(TMT6plex) 3 P47856 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Mus musculus OX=10090 GN=Gfpt1 PE=1 SV=3 D3YYD9; P47856; P47856-2 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Mus musculus OX=10090 GN=Gfpt1 PE=1 SV=1; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Mus musculus OX=10090 GN=Gfpt1 PE=1 SV=3; Isoform 2 of Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 OS=Mus musculus OX=10090 GN=Gfpt1 0 2 2 0.7029 0 1 1 1 726.37201 1451.73674 1451.73532 0.98 0.00071 0/0 0 0 9088501 HCD 30 MS2 9.461749 604.5 110 73.251 22348 22348 22346 QEplus033719.raw F4 589 518.1 687.1 523.3 657.5 652.3 171 3.4 1 FALSE 1.14E-05 0.0002002 0.799 -250 110877 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFDEAIK [K].rFDEAIk.[L] N-Term(TMT6plex); K7(TMT6plex) 5 P47857 "ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=3" O35514; P47857-3; P47857; Q99K08; P47857-2 "Phosphofructokinase-M (Connecting peptide) (Fragment) OS=Mus musculus OX=10090 GN=Pfkm PE=2 SV=1; Isoform 3 of ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm; ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm PE=1 SV=3; ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkm PE=2 SV=1; Isoform 2 of ATP-dependent 6-phosphofructokinase, muscle type OS=Mus musculus OX=10090 GN=Pfkm" 1 3 3 0.3434 0 1 1 1 446.27179 1336.80082 1336.79891 1.43 0.00064 0/0 0 0 118231736 HCD 30 MS2 32.36539 966.3 10.615 73.2533 22349 22349 22346 QEplus033719.raw F4 1095.2 381.2 861 1471.6 583.7 1405.1 367 3.32 1 FALSE 1.14E-05 0.000128 0.837 -250 110891 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAPSIPK [K].sAPSIPk.[E] N-Term(TMT6plex); K7(TMT6plex) 3 P14152 "Malate dehydrogenase, cytoplasmic OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=3" P14152; A0A5F8MPN8; B1ATQ3 "Malate dehydrogenase, cytoplasmic OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=3; Malate dehydrogenase OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=1; Cytosolic malate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=8" 0 2 2 0.2638 0 1 1 1 579.3692 1157.73113 1157.72943 1.47 0.00085 0/0 0 0 53950780 HCD 30 MS2 25.89284 1012.2 29.706 73.2578 22351 22351 22346 QEplus033719.raw F4 1102.1 757.2 1043.7 1105.4 869.7 1194.8 256 2.35 1 FALSE 0.0006383 0.009779 0.408 -250 110911 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPNEGADGQWK [R].kPNEGADGQWk.[K] N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex) 7 A0A0N4SV32 Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1 A0A0N4SV32; Q9CY58-3; Q3V274; Q3UJK2; Q9CY58; Q9CY58-2; Q3UMP4 Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1; Isoform 3 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; HABP4_PAI-RBP1 domain-containing protein OS=Mus musculus OX=10090 GN=Serbp1 PE=2 SV=1; HABP4_PAI-RBP1 domain-containing protein OS=Mus musculus OX=10090 GN=Serbp1 PE=2 SV=1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=2; Isoform 2 of Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1; Plasminogen activator inhibitor 1 RNA-binding protein OS=Mus musculus OX=10090 GN=Serbp1 PE=1 SV=1 0 3 3 0.7214 0 1 1 1 639.69867 1917.08146 1917.07972 0.9 0.00058 0/0 0 0 36383516 HCD 30 MS2 3.568673 2008.7 110 73.2648 22354 22354 22346 QEplus033719.raw F4 2315 1738.7 2020.3 1525.1 2322.3 2130.7 479 4.81 1 FALSE 1.14E-05 2.68E-11 2.106 -250 110927 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCNDFQYESK [K].ncNDFQYESk.[V] N-Term(TMT6plex); C2(Carbamidomethyl); K10(TMT6plex) 1 P68510 14-3-3 protein eta OS=Mus musculus OX=10090 GN=Ywhah PE=1 SV=2 P68510 14-3-3 protein eta OS=Mus musculus OX=10090 GN=Ywhah PE=1 SV=2 0 2 2 0.6604 0 1 1 1 881.92804 1762.8488 1762.84706 0.99 0.00087 0/0 0 0 10388394 HCD 30 MS2 0 762.9 110 73.2699 22356 22356 22346 QEplus033719.raw F4 776 793.9 754 444.2 1258.3 551 88 4.24 1 FALSE 1.14E-05 3.31E-07 1.328 -250 110931 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVQTSELK [K].eVQTSELk.[A] N-Term(TMT6plex); K8(TMT6plex) 12 O70318 Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2 Q811B2; O70318; B6ZHD0; Q80UE5; Q8CGJ6; Q80UE3; Q80UE4; A0A1W2P6I5; B6ZHC5; B6ZHC7; Q8C928; Q3UNQ6 Epb4.1l2 protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Epb4.1l2 protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Protein 4.1G OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1 0 2 2 0.5043 0 1 1 1 696.41168 1391.81609 1391.81462 1.06 0.00074 0/0 0 0 25796776 HCD 30 MS2 11.69284 1115.7 110 73.2772 22358 22358 22357 QEplus033719.raw F4 1033.5 1172.6 1356.6 748.2 1286.9 1096.6 447 3.49 1 FALSE 0.0002909 0.005797 0.483 -250 110935 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGVANVSIEDR [K].dGVANVSIEDR.[V] N-Term(TMT6plex) 1 P08228 Superoxide dismutase [Cu-Zn] OS=Mus musculus OX=10090 GN=Sod1 PE=1 SV=2 P08228 Superoxide dismutase [Cu-Zn] OS=Mus musculus OX=10090 GN=Sod1 PE=1 SV=2 0 2 2 0.6327 0 1 1 1 702.37073 1403.73418 1403.73279 0.99 0.0007 0/0 0 0 108411616 HCD 30 MS2 2.753299 541.6 20.397 73.282 22360 22360 22357 QEplus033719.raw F4 553.8 537.3 616.6 361.6 587.1 593.2 243 4.52 1 FALSE 1.14E-05 1.21E-09 1.792 -250 110941 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MSCTCLGNGK [R].mScTcLGNGk.[G] N-Term(TMT6plex); C3(Carbamidomethyl); C5(Carbamidomethyl); K10(TMT6plex) 14 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q99KD0; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.7435 0 1 1 1 529.26917 1585.79294 1585.79008 1.81 0.00096 0/0 0 0 45717948 HCD 30 MS2 55.72514 730.8 26.867 73.2842 22361 22361 22357 QEplus033719.raw F4 748.7 637.3 874.6 743.2 598.2 783.1 165 3.08 3 FALSE 0.0001504 0.003303 0.548 -250 110948 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVGLIAAR [R].kVGLIAAR.[R] N-Term(TMT6plex); K1(TMT6plex) 3 P62918 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2 Q3UJS0; P62918; Q3THC7 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1 1 3 3 0.413 0 1 1 1 429.29581 1285.87287 1285.87201 0.67 0.00029 0/0 0 0 22622492 HCD 30 MS2 35.51205 877 35.183 73.2865 22362 22362 22357 QEplus033719.raw F4 882 754 973.6 772.7 814.1 1065.3 74 2.47 1 FALSE 0.001473 0.02151 0.269 -250 110958 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEPTVPEDSGR [R].lEPTVPEDSGR.[Y] N-Term(TMT6plex) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; E9PZ16; Q5RKM8; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Hspg2 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 2 2 0.5686 0 1 1 1 714.88116 1428.75505 1428.75319 1.3 0.00093 0/0 0 0 16762142 HCD 30 MS2 0 421.6 110 73.289 22363 22363 22357 QEplus033719.raw F4 373.8 366.1 540.4 410.9 342.1 496.3 251 2.99 2 FALSE 1.14E-05 3.15E-08 1.523 -250 110964 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEYGDNAEK [R].lEYGDNAEk.[Y] N-Term(TMT6plex); K9(TMT6plex) 1 Q4VA29 "RNA transcription, translation and transport factor protein OS=Mus musculus OX=10090 GN=Rtraf PE=1 SV=1" Q4VA29 "RNA transcription, translation and transport factor protein OS=Mus musculus OX=10090 GN=Rtraf PE=1 SV=1" 0 2 2 0.4695 0 1 1 1 748.9046 1496.80193 1496.79969 1.49 0.00112 0/0 0 0 16742617 HCD 30 MS2 0 754.7 110 73.2915 22364 22364 22357 QEplus033719.raw F4 774.8 692.3 832.4 699.1 769.5 760.3 311 3.77 1 FALSE 1.14E-05 2.16E-06 1.174 -250 110969 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAMVSQLSR [K].dAMVSQLSR.[G] N-Term(TMT6plex) 1 Q5SX39 Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1 Q5SX39 Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1 0 2 2 0.6361 0 1 1 1 618.33508 1235.66289 1235.66154 1.09 0.00068 0/0 0 0 14857459 HCD 30 MS2 65.34194 1313.1 110 73.294 22365 22365 22357 QEplus033719.raw F4 1432.7 699.7 942.1 2383.4 922.8 1497.8 300 3.27 1 FALSE 1.14E-05 1.37E-06 1.212 -250 110978 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQNVLGEK [R].tQNVLGEk.[G] N-Term(TMT6plex); K8(TMT6plex) 7 Q5YLW3 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1 Q9D0A2; D3YV43; Q9CZP6; Q3UCL7; Q5YLW3; Q3UK56; A0A140LI77 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1 0 3 3 0.3978 0 1 1 1 449.60687 1346.80606 1346.80439 1.25 0.00056 0/0 0 0 14030477 HCD 30 MS2 53.59489 818.2 38.787 73.2963 22366 22366 22357 QEplus033719.raw F4 871.7 639.6 857.8 624.6 985.1 930.7 555 2.74 1 FALSE 0.0001603 0.003581 0.539 -250 110993 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPADLPK [K].nPADLPk.[L] N-Term(TMT6plex); K7(TMT6plex) 17 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q3TSK4; Q8C153; P58252; O89070; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3TPG2; Q3UZ14; Q3TK17; Q3TLB1; Q3TWX1; Q3TX47 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Elongation factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 0 3 3 0.3144 0 1 1 1 404.91718 1212.73697 1212.73524 1.43 0.00058 0/0 0 0 34821236 HCD 30 MS2 48.3017 813.6 23.306 73.3108 22371 22371 22368 QEplus033719.raw F4 993.6 490.1 795.2 552.3 1009.6 1041.1 223 2.64 1 FALSE 0.006069 0.0997 0.007 -250 110997 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATLPDADK [K].aTLPDADk.[E] N-Term(TMT6plex); K8(TMT6plex) 3 A1BN54; Q7TPR4 Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1;Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 Q99LJ3; A1BN54; Q7TPR4 Actn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Actn1 PE=2 SV=1; Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1; Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 0 2 2 0.2219 0 1 1 1 644.88007 1288.75286 1288.75129 1.22 0.00078 0/0 0 0 31416202 HCD 30 MS2 5.191939 1235.5 65.364 73.3131 22372 22372 22368 QEplus033719.raw F4 1218.7 1262 1448.7 847.4 1430.5 1205.7 479 3.29 2 FALSE 0.0003496 0.006702 0.464 -250 111004 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFQAPAK [K].kFQAPAk.[E] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 5 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q8CD09; Q9ERG0; Q8C7S2; Q8C3R7; Q8BT15 LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 1 3 3 0.4948 0 1 1 1 492.98889 1476.95212 1476.95055 1.07 0.00053 0/0 0 0 25561848 HCD 30 MS2 61.84667 997.4 25.956 73.3153 22373 22373 22368 QEplus033719.raw F4 1040.1 801.2 1142.5 872 984.5 1144.1 225 2.89 1 FALSE 4.43E-05 0.001664 0.616 -250 111021 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPFPINHGK [R].kPFPINHGk.[T] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 2 Q9JKB1 Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Mus musculus OX=10090 GN=Uchl3 PE=1 SV=2 A0A2I3BQ39; Q9JKB1 Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Mus musculus OX=10090 GN=Uchl3 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Mus musculus OX=10090 GN=Uchl3 PE=1 SV=2 0 4 4 0.6846 0 1 1 1 432.02563 1725.08071 1725.07787 1.64 0.00071 0/0 0 0 12257519 HCD 30 MS2 23.63524 848.2 96.047 73.3199 22375 22375 22368 QEplus033719.raw F4 879.1 648.6 947.5 699.6 942.9 971.6 157 4.47 1 FALSE 3.35E-05 0.001188 0.647 -250 111031 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQEELQHLEQQR [R].kQEELQHLEQQR.[Q] N-Term(TMT6plex); K1(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.5933 0 1 1 1 675.38092 2024.12821 2024.12891 -0.35 -0.00023 0/0 0 0 6027406 HCD 30 MS2 41.589 877.2 110 73.3249 22377 22377 22368 QEplus033719.raw F4 900 661 980.7 742.5 948 1031.1 438 2.68 2 FALSE 1.14E-05 7.17E-11 2.024 -250 111036 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VMEQTFDR [K].vMEQTFDR.[L] N-Term(TMT6plex) 2 O08691 "Arginase-2, mitochondrial OS=Mus musculus OX=10090 GN=Arg2 PE=1 SV=1" O08691; Q8R1Q7 "Arginase-2, mitochondrial OS=Mus musculus OX=10090 GN=Arg2 PE=1 SV=1; Arginase OS=Mus musculus OX=10090 GN=Arg2 PE=2 SV=1" 0 2 2 0.4737 0 1 1 1 627.82129 1254.6353 1254.63499 0.25 0.00016 0/0 0 0 8604942 HCD 30 MS2 41.20247 938.8 110 73.3274 22378 22378 22368 QEplus033719.raw F4 1490.4 532.6 698.8 791.9 1321.1 798 118 1.9 1 FALSE 0.003101 0.06043 0.113 -250 111045 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WCHDNGVNYK [K].wcHDNGVNYk.[I] N-Term(TMT6plex); C2(Carbamidomethyl); K10(TMT6plex) 14 P11276; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 Q3TCF1; A0A087WS56; P11276; Q99KD0; Q3UHL6; B7ZNJ1; Q3UHR1; B9EHT6; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; A0A087WSN6; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.8268 0 1 1 1 875.9411 1750.87493 1750.87355 0.79 0.00069 0/0 0 0 4235190 HCD 30 MS2 0 449.3 110 73.3372 22381 22381 22379 QEplus033719.raw F4 415.9 404.2 569 611.8 250.8 444.1 181 4.62 3 FALSE 1.14E-05 2.49E-08 1.542 -250 111052 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVNHLEK [R].iVNHLEk.[E] N-Term(TMT6plex); K7(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 3 3 0.4068 0 1 1 1 437.61182 1310.8209 1310.81964 0.96 0.00042 0/0 0 0 60080776 HCD 30 MS2 14.23182 651.7 22.905 73.3395 22382 22382 22379 QEplus033719.raw F4 830.7 366.3 700.9 583.8 514.4 913.9 155 3.81 1 FALSE 0.0008991 0.01238 0.368 -250 111062 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIASDYK [R].dIASDYk.[Y] N-Term(TMT6plex); K7(TMT6plex) 8 A0A571BF58; Q61953 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1;Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1 E9Q1W3; A0A571BF58; Q62411; F6RDH3; Q62412; Q61953; A0A571BF46; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=1 SV=8; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=2 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 2 2 0.4204 0 1 1 1 635.35712 1269.70696 1269.70909 -1.68 -0.00107 0/0 0 0 36729140 HCD 30 MS2 28.4545 1443.4 43.386 73.3418 22383 22383 22379 QEplus033719.raw F4 1426 518.7 1446 2227.3 610.1 2432.2 215 2.45 2 FALSE 0.001266 0.01725 0.307 -250 111071 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LMEEYER [R].lMEEYER.[L] N-Term(TMT6plex) 3 Q9JI91 Alpha-actinin-2 OS=Mus musculus OX=10090 GN=Actn2 PE=1 SV=2 Q5FW75; Q9JI91; Q8K3Q4 Actinin alpha 2 OS=Mus musculus OX=10090 GN=Actn2 PE=2 SV=1; Alpha-actinin-2 OS=Mus musculus OX=10090 GN=Actn2 PE=1 SV=2; Actinin alpha 2 OS=Mus musculus OX=10090 GN=Actn2 PE=2 SV=1 0 2 2 0.4275 0 1 1 1 599.80298 1198.59868 1198.59754 0.95 0.00057 0/0 0 0 18249388 HCD 30 MS2 28.20297 1320.1 110 73.3443 22384 22384 22379 QEplus033719.raw F4 1389.8 626.7 1369.9 1720.8 725.3 2088.2 114 2.76 1 FALSE 0.0004091 0.007296 0.452 -250 111077 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAEIEHAEK [K].vAEIEHAEk.[E] N-Term(TMT6plex); K9(TMT6plex) 2 Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 Q9JJD8; Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=2 SV=1; CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 0 2 2 0.5837 0 1 1 1 742.42902 1483.85076 1483.85206 -0.88 -0.00065 0/0 0 0 11430790 HCD 30 MS2 19.24632 629.7 110 73.3468 22385 22385 22379 QEplus033719.raw F4 611.1 555.1 695.1 530.8 715.1 670.9 343 4.06 1 FALSE 1.14E-05 9.39E-07 1.243 -250 111090 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLDNNYSTLNER [K].sLDNNYSTLNER.[G] N-Term(TMT6plex) 14 P30999 Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2 D3Z2H7; E9Q905; D3Z2H2; P30999; E9Q8Z9; G3X9V2; E9Q986; E9Q8Z8; E9Q901; E9Q8Z6; E9Q904; E9Q8Z4; D3Z7H6; E9Q907 Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=2; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1; Catenin delta-1 OS=Mus musculus OX=10090 GN=Ctnnd1 PE=1 SV=1 0 2 2 0.7168 0 1 1 1 827.91638 1654.82549 1654.82339 1.26 0.00105 0/0 0 0 7121465.5 HCD 30 MS2 12.45471 391.5 110 73.3519 22387 22387 22379 QEplus033719.raw F4 360.1 419.8 448.6 252.4 499.6 368.6 194 3.99 1 FALSE 1.14E-05 3.98E-10 1.883 -250 111115 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTSLGK [RK].vTSLGk.[D] N-Term(TMT6plex); K6(TMT6plex) 6 P63254; Q9DCT8 Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=2;Cysteine-rich protein 2 OS=Mus musculus OX=10090 GN=Crip2 PE=1 SV=1 P63254; Q6P3B4; A0A0G2JEK2; Q8C2N7; A0A0G2JF37; Q9DCT8 Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=2; Cysteine-rich protein 1 (Intestinal) OS=Mus musculus OX=10090 GN=Crip1 PE=2 SV=1; Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Crip1 PE=2 SV=1; Cysteine-rich protein 2 OS=Mus musculus OX=10090 GN=Crip2 PE=1 SV=1; Cysteine-rich protein 2 OS=Mus musculus OX=10090 GN=Crip2 PE=1 SV=1 0 2 2 0.1452 0 1 1 1 531.85187 1062.69646 1062.69232 3.9 0.00207 0/0 0 0 38963100 HCD 30 MS2 53.26693 1177.1 23.36 73.3637 22391 22391 22390 QEplus033719.raw F4 1264 813.8 1230.8 1069.6 1266.1 1418.6 63 1.86 2 FALSE 0.006977 0.1105 -0.021 -250 111158 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MMASGLTER [K].mMASGLTER.[V] N-Term(TMT6plex) 2 Q99LE6 ATP-binding cassette sub-family F member 2 OS=Mus musculus OX=10090 GN=Abcf2 PE=1 SV=1 Q99LE6; Q3UVI9 ATP-binding cassette sub-family F member 2 OS=Mus musculus OX=10090 GN=Abcf2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abcf2 PE=2 SV=1 0 2 2 0.6483 0 1 1 1 612.81677 1224.62627 1224.62779 -1.25 -0.00076 0/0 0 0 17836120 HCD 30 MS2 16.2457 1055.1 110 73.38 22398 22398 22390 QEplus033719.raw F4 970.3 882.3 1171.4 822.9 1256.1 1227.3 181 3.27 1 FALSE 1.14E-05 5.53E-06 1.096 -250 111167 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FSALDSR [R].fSALDSR.[G] N-Term(TMT6plex) 3 Q6P5E4 UDP-glucose:glycoprotein glucosyltransferase 1 OS=Mus musculus OX=10090 GN=Uggt1 PE=1 SV=4 Q6P5E4; G3UYG7; Q8BWM7 UDP-glucose:glycoprotein glucosyltransferase 1 OS=Mus musculus OX=10090 GN=Uggt1 PE=1 SV=4; UDP-glucose:glycoprotein glucosyltransferase 1 (Fragment) OS=Mus musculus OX=10090 GN=Uggt1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Uggt1 PE=2 SV=1 0 2 2 0.292 0 1 1 1 512.78516 1024.56304 1024.56248 0.55 0.00028 0/0 0 0 17432846 HCD 30 MS2 51.87003 1212.4 63.632 73.3822 22399 22399 22390 QEplus033719.raw F4 1183.9 1011.4 1345.4 1038.7 1300.9 1393.9 109 2.5 1 FALSE 0.002526 0.04973 0.143 -250 111175 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNAACAALDK [R].sNAAcAALDk.[K] N-Term(TMT6plex); C5(Carbamidomethyl); K10(TMT6plex) 2 Q5SX39 Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1 Q5SX39; Q9JHR4 Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin heavy chain IIB (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1 0 2 2 0.6499 0 1 1 1 739.90863 1478.80998 1478.80373 4.23 0.00312 0/0 0 0 14353368 HCD 30 MS2 19.64966 707.3 110 73.3848 22400 22400 22390 QEplus033719.raw F4 900.3 213.4 346.1 1781.8 275.1 727.3 377 3.77 1 FALSE 1.14E-05 1.16E-06 1.225 -250 111181 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DKGEYVCDCGTDTTK [K].dkGEYVcDcGTDTTk.[A] N-Term(TMT6plex); K2(TMT6plex); C7(Carbamidomethyl); C9(Carbamidomethyl); K15(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; Q3TZL3; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 1 3 3 0.8468 0 1 1 1 812.737 2436.19645 2436.19899 -1.04 -0.00085 0/0 0 0 8371550 HCD 30 MS2 6.756354 471.3 110 73.3946 22403 22403 22401 QEplus033719.raw F4 557.7 58.2 342.6 981.9 58.9 828.3 195 6.2 2 FALSE 1.14E-05 6.31E-16 3.356 -250 111188 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVNVVEQEK [K].kVNVVEQEk.[I] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 3 Q5FW97 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1 Q8CF78; Q5FW97; B1ARR7 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; Alpha-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 1 3 3 0.5479 0 1 1 1 587.36786 1760.08902 1760.0885 0.3 0.00018 0/0 0 0 58900656 HCD 30 MS2 10.25545 1315 36.5 73.3968 22404 22404 22401 QEplus033719.raw F4 1472.3 1340.1 1389.7 1048 1455.1 1184.9 339 4.91 1 FALSE 1.14E-05 3.60E-08 1.512 -250 111196 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GRPQATVAWK [K].gRPQATVAWk.[K] N-Term(TMT6plex); K10(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.5675 0 1 1 1 524.65302 1571.94449 1571.94222 1.45 0.00076 0/0 0 0 23044950 HCD 30 MS2 48.93192 1204.5 35.451 73.3991 22405 22405 22401 QEplus033719.raw F4 1532.9 632.1 884.4 1290.3 1684.3 1203 356 2.89 2 FALSE 0.001185 0.01616 0.319 -250 111214 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVNHLEK [R].iVNHLEk.[E] N-Term(TMT6plex); K7(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.4326 0 1 1 1 655.914 1310.82073 1310.81964 0.83 0.00054 0/0 0 0 12223307 HCD 30 MS2 38.43152 1126.9 110 73.4064 22408 22408 22401 QEplus033719.raw F4 1253.3 810.1 1278 941.9 1097.9 1380.1 155 3.19 1 FALSE 0.0002719 0.005394 0.492 -250 111224 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTLTPEEEAR [K].vTLTPEEEAR.[L] N-Term(TMT6plex) 9 A0A1B0GSX0 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1 Q3TI99; Q3THB4; Q3UIC3; Q3UDU4; Q99K20; A0A1B0GSR9; Q3TCI7; A0A1B0GSX0; P06151 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3 0 3 3 0.5484 0 1 1 1 458.58752 1373.74802 1373.74738 0.47 0.00021 0/0 0 0 11913608 HCD 30 MS2 63.76019 802.7 105.691 73.4088 22409 22409 22401 QEplus033719.raw F4 831.8 566.5 787.4 672 972.6 985.8 328 3.72 1 FALSE 1.14E-05 1.34E-05 1.023 -250 111254 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALAPQLAR [R].aLAPQLAR.[L] N-Term(TMT6plex) 4 Q64105 Sepiapterin reductase OS=Mus musculus OX=10090 GN=Spr PE=1 SV=1 Q64105; G3UXX3; Q91XH5; G3UZ79 Sepiapterin reductase OS=Mus musculus OX=10090 GN=Spr PE=1 SV=1; Sepiapterin reductase OS=Mus musculus OX=10090 GN=Spr PE=1 SV=1; Sepiapterin reductase OS=Mus musculus OX=10090 GN=Spr PE=1 SV=1; Sepiapterin reductase OS=Mus musculus OX=10090 GN=Spr PE=1 SV=1 0 2 2 0.4838 0 1 1 1 534.84045 1068.67363 1068.67269 0.88 0.00047 0/0 0 0 38390332 HCD 30 MS2 24.91766 960 37.427 73.4254 22415 22415 22412 QEplus033719.raw F4 880.6 880.6 1098.1 839 1016.5 1045 54 2.77 1 FALSE 0.0002814 0.00575 0.484 -250 111263 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPSHVPSVSPPMR [R].gPSHVPSVSPPMR.[I] N-Term(TMT6plex) 3 E9PZ16 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; E9PZ16; Q2XQV0 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Perlecan (Fragment) OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1 0 3 3 0.527 0 1 1 1 526.28809 1576.8497 1576.84671 1.9 0.001 0/0 0 0 19537200 HCD 30 MS2 40.59385 649 46.073 73.4277 22416 22416 22412 QEplus033719.raw F4 713.2 496 668.2 601.4 805.4 610 328 3.7 1 FALSE 1.14E-05 8.23E-05 0.873 -250 111268 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEAQPIVTK [K].eEAQPIVTk.[Y] N-Term(TMT6plex); K9(TMT6plex) 2 Q00PI9 Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Mus musculus OX=10090 GN=Hnrnpul2 PE=1 SV=2 Q00PI9; A0A494BAL6 "Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Mus musculus OX=10090 GN=Hnrnpul2 PE=1 SV=2; Predicted gene, 50139 (Fragment) OS=Mus musculus OX=10090 GN=Gm50139 PE=4 SV=1" 0 2 2 0.5596 0 1 1 1 736.94 1472.87273 1472.87247 0.18 0.00013 0/0 0 0 16221760 HCD 30 MS2 27.78575 657.3 110 73.4302 22417 22417 22412 QEplus033719.raw F4 657.1 536.2 712.8 557.6 784.8 695.6 432 3.61 1 FALSE 1.14E-05 1.30E-06 1.215 -250 111286 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLQQYQSQAK [R].dLQQYQSQAk.[Q] N-Term(TMT6plex); K10(TMT6plex) 4 O08547 Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=3 Q3UZ06; O08547; E9Q6R3; A0A0G2JF08 Uncharacterized protein OS=Mus musculus OX=10090 GN=Sec22b PE=2 SV=1; Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=3; Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=1; Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=1 0 2 2 0.6044 0 1 1 1 833.96246 1666.91765 1666.91646 0.72 0.0006 0/0 0 0 9310654 HCD 30 MS2 0 398.3 110 73.4352 22419 22419 22412 QEplus033719.raw F4 405.9 323 446.8 331.4 472.9 409.8 413 5.03 1 FALSE 1.14E-05 6.78E-09 1.649 -250 111296 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MACGLGGK [R].mAcGLGGk.[L] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 3 Q8BKC5 Importin-5 OS=Mus musculus OX=10090 GN=Ipo5 PE=1 SV=3 Q8BKC5-2; Q7TN23; Q8BKC5 Isoform 2 of Importin-5 OS=Mus musculus OX=10090 GN=Ipo5; Ipo5 protein (Fragment) OS=Mus musculus OX=10090 GN=Ipo5 PE=2 SV=1; Importin-5 OS=Mus musculus OX=10090 GN=Ipo5 PE=1 SV=3 0 2 2 0.3478 0 1 1 1 626.35236 1251.69744 1251.69537 1.65 0.00103 0/0 0 0 7533421.5 HCD 30 MS2 36.49022 1239 110 73.4377 22420 22420 22412 QEplus033719.raw F4 1246.2 1043.4 1289.3 941.1 1588 1326 323 2.99 1 FALSE 1.14E-05 0.0001266 0.837 -250 111314 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FIVGSDR [R].fIVGSDR.[A] N-Term(TMT6plex) 1 Q9ERE7 LRP chaperone MESD OS=Mus musculus OX=10090 GN=Mesd PE=1 SV=1 Q9ERE7 LRP chaperone MESD OS=Mus musculus OX=10090 GN=Mesd PE=1 SV=1 0 2 2 0.4327 0 1 1 1 511.79587 1022.58446 1022.58321 1.22 0.00062 0/0 0 0 31230650 HCD 30 MS2 38.17292 1063 40.9 73.4425 22422 22422 22412 QEplus033719.raw F4 1107.3 915.6 1155.1 891.9 1211.4 1096.8 195 2.75 1 FALSE 0.0002019 0.004139 0.523 -250 111324 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFIDNLR [K].rFIDNLR.[D] N-Term(TMT6plex) 2 Q04857 Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 Q8C6Y0; Q04857 VWFA domain-containing protein OS=Mus musculus OX=10090 GN=Col6a1 PE=2 SV=1; Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 1 3 3 0.4195 0 1 1 1 388.23492 1162.69022 1162.68941 0.7 0.00027 0/0 0 0 19168956 HCD 30 MS2 3.202307 280.6 72.663 73.4497 22424 22424 22423 QEplus033719.raw F4 259 238 304.4 241.7 304.2 336.4 364 3.79 1 FALSE 0.0008718 0.01189 0.375 -250 111351 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQLEETDHQK [R].lQLEETDHQk.[S] N-Term(TMT6plex); K10(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.6442 0 1 1 1 566.98651 1698.94498 1698.94267 1.36 0.00077 0/0 0 0 49534176 HCD 30 MS2 50.66292 1302 30.432 73.4568 22427 22427 22423 QEplus033719.raw F4 1342.4 1112.1 1361.7 1188.3 1319 1488.5 382 4.16 2 FALSE 1.14E-05 5.22E-10 1.861 -250 111363 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFLDAGHK [K].kFLDAGHk.[L] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 1 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 1 4 4 0.2305 0 1 1 1 401.50412 1602.99465 1602.99347 0.73 0.00029 0/0 0 0 33600220 HCD 30 MS2 24.3634 1040.3 49.237 73.4613 22429 22429 22423 QEplus033719.raw F4 947 1134.7 1156.1 810.9 1168.9 1024.2 331 3.08 1 FALSE 1.14E-05 6.54E-06 1.082 -250 111373 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AADAVEDLR [K].aADAVEDLR.[W] N-Term(TMT6plex) 3 Q9WVE8 Protein kinase C and casein kinase substrate in neurons protein 2 OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1 A0A2R8W6S4; A0A338P6P7; Q9WVE8 Protein kinase C and casein kinase substrate in neurons protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1; Protein kinase C and casein kinase substrate in neurons protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1; Protein kinase C and casein kinase substrate in neurons protein 2 OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1 0 2 2 0.4787 0 1 1 1 594.82465 1188.64202 1188.64218 -0.14 -0.00008 0/0 0 0 23241694 HCD 30 MS2 43.43079 1223.3 110 73.4638 22430 22430 22423 QEplus033719.raw F4 1268.5 1091.5 1290.7 1009.9 1399.6 1279.9 324 2.82 1 FALSE 1.14E-05 0.00012 0.842 -250 111393 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVNVVEQEK [K].kVNVVEQEk.[I] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 3 Q5FW97 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1 Q8CF78; Q5FW97; B1ARR7 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; Alpha-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 1 2 2 0.491 0 1 1 1 880.54816 1760.08904 1760.0885 0.31 0.00027 0/0 0 0 6576386 HCD 30 MS2 0 689.2 110 73.471 22433 22433 22423 QEplus033719.raw F4 748.4 715.1 729 518 797.5 627.3 339 3.89 1 FALSE 1.14E-05 1.01E-05 1.046 -250 111401 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVTKLEK [R].sVTkLEk.[S] N-Term(TMT6plex); K4(TMT6plex); K7(TMT6plex) 17 E9Q456; G5E8R2; G5E8R1; E9Q450 Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 E9Q456; E9Q455; G5E8R2; E9Q453; G5E8R1; Q8BSH3; E9Q452; F8WID5; E9Q454; E9Q448; E9Q450; G5E8R0; Q564G1; B7ZNL3; Q8BP43; A0A2R2Y2P8; P58771 "Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tpm1 protein OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1 kappa OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 1 2 2 0.2847 0 1 1 1 746.48877 1491.97026 1491.97134 -0.72 -0.00054 0/0 0 0 6292152 HCD 30 MS2 0 317.4 110 73.4784 22435 22435 22434 QEplus033719.raw F4 329.5 287.8 332.6 296.3 355.1 303.2 167 2.88 4 FALSE 0.001567 0.02388 0.252 -250 111411 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNASASSLK [K].vNASASSLk.[K] N-Term(TMT6plex); K9(TMT6plex) 2 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 A0A0G2JDU7; Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=1; Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 0 3 3 0.4294 0 1 1 1 445.60651 1334.80497 1334.80439 0.43 0.00019 0/0 0 0 51892200 HCD 30 MS2 57.9479 1022.7 30.428 73.4806 22436 22436 22434 QEplus033719.raw F4 1096.6 796.2 1041.8 918.9 1232.8 1049.6 316 3.61 1 FALSE 0.0003496 0.006831 0.461 -250 111419 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELPGHTGYLSCCR [R].eLPGHTGYLSccR.[F] N-Term(TMT6plex); C11(Carbamidomethyl); C12(Carbamidomethyl) 10 P29387; E9QKR0 Guanine nucleotide-binding protein subunit beta-4 OS=Mus musculus OX=10090 GN=Gnb4 PE=1 SV=4;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1 P29387; Q3U2F9; D3Z1M1; E9QKR0; Q3THF3; Q3TY18; D3Z1T4; E9PWM7; P62880; D3YZX3 Guanine nucleotide-binding protein subunit beta-4 OS=Mus musculus OX=10090 GN=Gnb4 PE=1 SV=4; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Gnb4 PE=2 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 (Fragment) OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Gnb4 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Gnb4 PE=2 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 (Fragment) OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=3; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Mus musculus OX=10090 GN=Gnb2 PE=1 SV=1 0 3 3 0.7737 0 1 1 1 593.62225 1778.85221 1778.85154 0.37 0.00022 0/0 0 0 15592595 HCD 30 MS2 11.4198 559.8 110 73.4831 22437 22437 22434 QEplus033719.raw F4 572.8 534 590.8 484.7 658 518.7 93 4.64 2 FALSE 1.14E-05 3.15E-07 1.333 -250 111425 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVENSSTAIGIR [K].aVENSSTAIGIR.[C] N-Term(TMT6plex) 2 Q9DCD8 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1 Q9DCD8; O70435 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1; Proteasome subunit alpha type-3 OS=Mus musculus OX=10090 GN=Psma3 PE=1 SV=3 0 2 2 0.4365 0 1 1 1 723.91022 1446.81316 1446.81137 1.23 0.00089 0/0 0 0 10753067 HCD 30 MS2 14.71237 516.1 110 73.4856 22438 22438 22434 QEplus033719.raw F4 541.7 486.8 572.8 393.3 575.5 526.8 432 3.78 1 FALSE 1.14E-05 2.72E-07 1.345 -250 111464 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEQDLLHK [K].qEQDLLHk.[T] N-Term(TMT6plex); K8(TMT6plex) 2 Q7TPV4 Myb-binding protein 1A OS=Mus musculus OX=10090 GN=Mybbp1a PE=1 SV=2 A0JLT5; Q7TPV4 Mybbp1a protein (Fragment) OS=Mus musculus OX=10090 GN=Mybbp1a PE=2 SV=1; Myb-binding protein 1A OS=Mus musculus OX=10090 GN=Mybbp1a PE=1 SV=2 0 3 3 0.3459 0 1 1 1 490.289 1468.85245 1468.8524 0.04 0.00002 0/0 0 0 24789692 HCD 30 MS2 61.91702 1193.3 34.738 73.4949 22442 22442 22434 QEplus033719.raw F4 1493.3 728.5 1084.4 1521.7 1117.4 1214.2 305 2.92 1 FALSE 1.14E-05 3.40E-05 0.946 -250 111469 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLDSVAK [K].tLDSVAk.[E] N-Term(TMT6plex); K7(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 D3YUF7; P48678; P48678-2 Prelamin-A/C (Fragment) OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=1; Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 0 2 2 0.3404 0 1 1 1 596.37091 1191.73454 1191.73491 -0.31 -0.00018 0/0 0 0 19058184 HCD 30 MS2 37.62068 1343 92.676 73.4972 22443 22443 22434 QEplus033719.raw F4 1316.3 1139.5 1467 998.9 1608.7 1527.5 288 2.85 1 FALSE 0.001083 0.01407 0.344 -250 111486 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGFAHK [R].lGFAHk.[K] N-Term(TMT6plex); K6(TMT6plex) 1 B6YY24 Skeletal muscle cells re-entry induced OS=Mus musculus OX=10090 GN=Fam91a1 PE=1 SV=1 B6YY24 Skeletal muscle cells re-entry induced OS=Mus musculus OX=10090 GN=Fam91a1 PE=1 SV=1 0 3 3 0.5081 0 1 1 1 377.57526 1130.71122 1130.70864 2.28 0.00086 0/0 0 0 3957386 HCD 30 MS2 79.32008 713.5 110 73.507 22446 22446 22445 QEplus033719.raw F4 711.8 485.7 764.2 541 830.7 947.8 233 2.48 1 FALSE 0.0006035 0.008871 0.423 -250 111503 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDVGQPQPGRENFQK [R].eDVGQPQPGRENFQk.[W] N-Term(TMT6plex); K15(TMT6plex) 2 Q9WVA4 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4 Q9WVA4; A0A0A6YXG6 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4; Transgelin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=1 1 3 3 0.7262 0 1 1 1 729.72357 2187.15616 2187.15585 0.14 0.0001 0/0 0 0 25611334 HCD 30 MS2 0 1125.7 110 73.5141 22449 22449 22445 QEplus033719.raw F4 1236.1 1287.7 1106.9 609.8 1722.9 790.9 362 3.25 1 FALSE 1.14E-05 1.60E-11 2.148 -250 111507 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMAGVVK [K].sMAGVVk.[S] N-Term(TMT6plex); K7(TMT6plex) 3 Q99LU0 Charged multivesicular body protein 1b-1 OS=Mus musculus OX=10090 GN=Chmp1b1 PE=1 SV=1 Q99LU0; Q3TJ28; Q9CQD4 Charged multivesicular body protein 1b-1 OS=Mus musculus OX=10090 GN=Chmp1b1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Chmp1b PE=2 SV=1; Charged multivesicular body protein 1b-2 OS=Mus musculus OX=10090 GN=Chmp1b2 PE=2 SV=2 0 2 2 0.4357 0 1 1 1 575.35645 1149.70561 1149.70659 -0.85 -0.00049 0/0 0 0 14319989 HCD 30 MS2 38.39449 1756.2 110 73.5188 22451 22451 22445 QEplus033719.raw F4 1795.2 1693.3 1933 1312.7 2065.9 1737.2 215 2.41 1 FALSE 0.0007816 0.0108 0.392 -250 111516 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSSPYFK [K].sSSPYFk.[D] N-Term(TMT6plex); K7(TMT6plex) 2 Q91VH2 Sorting nexin-9 OS=Mus musculus OX=10090 GN=Snx9 PE=1 SV=1 Q91VH2; Q3TZU7 Sorting nexin-9 OS=Mus musculus OX=10090 GN=Snx9 PE=1 SV=1; Sorting nexin OS=Mus musculus OX=10090 GN=Snx9 PE=2 SV=1 0 2 2 0.2032 0 1 1 1 637.36353 1273.71977 1273.71926 0.4 0.00026 0/0 0 0 13432984 HCD 30 MS2 41.74084 1268.1 110 73.5214 22452 22452 22445 QEplus033719.raw F4 1131.6 1289.6 1496.6 924.1 1567.3 1199.6 325 2.51 1 FALSE 0.002981 0.05815 0.119 -250 111525 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NECVVVIR [R].nEcVVVIR.[V] N-Term(TMT6plex); C3(Carbamidomethyl) 1 Q6ZWX6 Eukaryotic translation initiation factor 2 subunit 1 OS=Mus musculus OX=10090 GN=Eif2s1 PE=1 SV=3 Q6ZWX6 Eukaryotic translation initiation factor 2 subunit 1 OS=Mus musculus OX=10090 GN=Eif2s1 PE=1 SV=3 0 2 2 0.52 0 1 1 1 609.3476 1217.68791 1217.68736 0.46 0.00028 0/0 0 0 10312708 HCD 30 MS2 55.71413 1275.5 110 73.5239 22453 22453 22445 QEplus033719.raw F4 1344.6 1014.1 1282.5 1079.9 1567 1364.8 362 3 1 FALSE 1.14E-05 4.05E-05 0.932 -250 111549 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVVGLPGQR [R].gVVGLPGQR.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087; Q99LL6 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4; Col1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1 0 2 2 0.5869 0 1 1 1 556.34308 1111.67888 1111.67851 0.33 0.00019 0/0 0 0 29585208 HCD 30 MS2 40.43293 1150.1 68.797 73.5385 22458 22458 22456 QEplus033719.raw F4 1061.2 1154.3 1371.7 658.6 1455.2 1199.4 66 2.13 1 FALSE 0.0003496 0.006624 0.466 -250 111556 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLHQMGIK [K].gLHQMGIk.[Y] N-Term(TMT6plex); K8(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 3 3 0.7017 0 1 1 1 447.94092 1341.8082 1341.8077 0.38 0.00017 0/0 0 0 65789424 HCD 30 MS2 13.00791 603.8 20.746 73.543 22460 22460 22456 QEplus033719.raw F4 662.6 295.8 592.9 582 408.6 1081 250 3.62 1 FALSE 1.14E-05 0.000409 0.739 -250 111559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FASSPLR [R].fASSPLR.[V] N-Term(TMT6plex) 2 Q3UPL0 Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2 Q3UPL0; Q3UPL0-2 Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2; Isoform 2 of Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a 0 2 2 0.4 0 1 1 1 503.79813 1006.58898 1006.5883 0.68 0.00034 0/0 0 0 46647188 HCD 30 MS2 20.4665 831.5 28.287 73.5452 22461 22461 22456 QEplus033719.raw F4 818.6 700.4 944.3 705.8 917.8 902.4 165 2.15 1 FALSE 0.0005556 0.008577 0.429 -250 111571 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WCNEHLK [R].wcNEHLk.[C] N-Term(TMT6plex); C2(Carbamidomethyl); K7(TMT6plex) 9 Q80X90; B9EKP5; Q8VHX6 "Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3;Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1;Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3" Q80X90; B7FAV1; F6XC15; B9EKP5; Q8BTM8-2; Q8BTM8; Q8VHX6-2; Q8VHX6; B7FAU9 "Filamin-B OS=Mus musculus OX=10090 GN=Flnb PE=1 SV=3; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Isoform 2 of Filamin-A OS=Mus musculus OX=10090 GN=Flna; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.5137 0 1 1 1 482.26334 1444.77546 1444.77713 -1.16 -0.00056 0/0 0 0 31628722 HCD 30 MS2 34.07664 1221.3 46.242 73.5498 22463 22463 22456 QEplus033719.raw F4 1431.9 997 1274.5 961.8 1430.4 1232.2 302 3.66 3 FALSE 0.0008445 0.01171 0.378 -250 111577 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VMAVNK [R].vMAVNk.[Y] N-Term(TMT6plex); K6(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.5043 0 1 1 1 560.35309 1119.6989 1119.69602 2.57 0.00144 0/0 0 0 23641872 HCD 30 MS2 62.06895 1013.7 23.366 73.552 22464 22464 22456 QEplus033719.raw F4 1242.3 478.7 748.5 1436.3 1009.8 1166.3 159 2.34 2 FALSE 0.004206 0.07696 0.069 -250 111587 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAGQVAAANK [R].iAGQVAAANk.[K] N-Term(TMT6plex); K10(TMT6plex) 2 Q5M9P3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1 Q5M9P3; Q9CZX8 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=3 0 2 2 0.5848 0 1 1 1 700.93451 1400.86174 1400.86257 -0.59 -0.00041 0/0 0 0 18890482 HCD 30 MS2 14.67511 1016.5 110 73.5545 22465 22465 22456 QEplus033719.raw F4 1119.5 911.6 1125.3 734.2 1122.3 1086.1 362 4.07 1 FALSE 1.14E-05 1.04E-08 1.614 -250 111596 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPPTDEELK [K].kPPTDEELk.[E] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 3 Q7TNV0; Q9CVL7 Protein DEK OS=Mus musculus OX=10090 GN=Dek PE=1 SV=1;SAP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dek PE=2 SV=1 Q7TNV0; Q3UR53; Q9CVL7 Protein DEK OS=Mus musculus OX=10090 GN=Dek PE=1 SV=1; DEK_C domain-containing protein OS=Mus musculus OX=10090 GN=Dek PE=2 SV=1; SAP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dek PE=2 SV=1 0 3 3 0.5184 0 1 1 1 582.02167 1744.05045 1744.04596 2.57 0.0015 0/0 0 0 12362063 HCD 30 MS2 52.15152 1386.8 110 73.557 22466 22466 22456 QEplus033719.raw F4 1492.7 1229.2 1404.2 1158.1 1591.7 1445.1 356 2.99 2 FALSE 1.14E-05 5.87E-05 0.901 -250 111634 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STCIYGGAPK [K].sTcIYGGAPk.[G] N-Term(TMT6plex); C3(Carbamidomethyl); K10(TMT6plex) 11 Q5U222; Q501J6 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1;Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1 Q3UXW3; Q5U222; Q3TU25; Q3V0Z8; Q501J6; Q3U741; A1L333; Q501J6-2; S4R1I6; Q61656; Q8BTS0 RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Isoform 2 of Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 0 2 2 0.7339 0 1 1 1 756.41895 1511.83061 1511.82922 0.92 0.0007 0/0 0 0 11062569 HCD 30 MS2 0 650.2 110 73.5761 22473 22473 22467 QEplus033719.raw F4 646.4 681.2 771.6 470.4 751.5 579.9 326 3.87 2 FALSE 1.14E-05 3.07E-08 1.525 -250 111644 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDDSTNSLVGGR [R].mDDSTNSLVGGR.[G] N-Term(TMT6plex) 2 Q147V6 Stbd1 protein OS=Mus musculus OX=10090 GN=Stbd1 PE=2 SV=1 Q147V6; Q8C7E7 Stbd1 protein OS=Mus musculus OX=10090 GN=Stbd1 PE=2 SV=1; Starch-binding domain-containing protein 1 OS=Mus musculus OX=10090 GN=Stbd1 PE=1 SV=1 0 2 2 0.7278 0 1 1 1 740.86639 1480.72551 1480.72632 -0.55 -0.00041 0/0 0 0 5669800 HCD 30 MS2 43.95051 508.9 110 73.5787 22474 22474 22467 QEplus033719.raw F4 527.7 271.2 425.5 855.2 398.8 574.7 134 3.38 1 FALSE 1.14E-05 4.32E-09 1.686 -250 111651 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LIDHVK [R].lIDHVk.[K] N-Term(TMT6plex); K6(TMT6plex) 2 Q810A7 ATP-dependent RNA helicase DDX42 OS=Mus musculus OX=10090 GN=Ddx42 PE=1 SV=3 Q810A7; Q810A7-2 ATP-dependent RNA helicase DDX42 OS=Mus musculus OX=10090 GN=Ddx42 PE=1 SV=3; Isoform 2 of ATP-dependent RNA helicase DDX42 OS=Mus musculus OX=10090 GN=Ddx42 0 3 3 0.3246 0 1 1 1 394.92563 1182.76233 1182.76106 1.07 0.00042 0/0 0 0 4766204.5 HCD 30 MS2 70.16453 683.8 110 73.5811 22475 22475 22467 QEplus033719.raw F4 716.6 568.9 740.4 502.1 803 771.7 78 3.05 1 FALSE 0.0015 0.02176 0.267 -250 111660 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVNVVEQEK [K].kVNVVEQEk.[I] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 3 Q5FW97 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1 Q8CF78; Q5FW97; B1ARR7 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; Alpha-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 1 4 4 0.4138 0 1 1 1 440.77777 1760.08925 1760.0885 0.43 0.00019 0/0 0 0 71846704 HCD 30 MS2 29.37393 522.6 18.337 73.5834 22476 22476 22467 QEplus033719.raw F4 508.6 553.8 596.6 350.1 590 536.8 339 3.48 1 FALSE 1.14E-05 0.0002727 0.773 -250 111674 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GASQAGMTGYGMPR [RK].gASQAGMTGYGMPR.[Q] N-Term(TMT6plex) 3 Q9WVA4; Q9R1Q8 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4;Transgelin-3 OS=Mus musculus OX=10090 GN=Tagln3 PE=1 SV=1 Q9WVA4; Q9D6K2; Q9R1Q8 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4; Transgelin OS=Mus musculus OX=10090 GN=Tagln3 PE=2 SV=1; Transgelin-3 OS=Mus musculus OX=10090 GN=Tagln3 PE=1 SV=1 0 2 2 0.8372 0 1 1 1 806.89331 1612.77934 1612.77731 1.26 0.00102 0/0 0 0 13913431 HCD 30 MS2 0 462.8 110 73.593 22479 22479 22478 QEplus033719.raw F4 438.7 504.5 461.2 276.3 718.6 377.7 102 5.96 2 FALSE 1.14E-05 9.49E-15 2.761 -250 111690 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAGQVAAANK [R].iAGQVAAANk.[K] N-Term(TMT6plex); K10(TMT6plex) 2 Q5M9P3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1 Q5M9P3; Q9CZX8 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=3 0 3 3 0.704 0 1 1 1 467.62485 1400.85999 1400.86257 -1.84 -0.00086 0/0 0 0 62494688 HCD 30 MS2 14.50082 738.7 17.56 73.5975 22481 22481 22478 QEplus033719.raw F4 801.2 597.1 759.4 418 882.9 973.8 314 3.48 1 FALSE 1.14E-05 3.65E-07 1.32 -250 111697 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EDVGQPQPGRENFQK [R].eDVGQPQPGRENFQk.[W] N-Term(TMT6plex); K15(TMT6plex) 2 Q9WVA4 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4 Q9WVA4; A0A0A6YXG6 Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4; Transgelin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=1 1 4 4 1 0 1 1 1 547.5451 2187.15859 2187.15585 1.25 0.00068 0/0 0 0 21646994 HCD 30 MS2 38.19893 684 35.337 73.5997 22482 22482 22478 QEplus033719.raw F4 684.9 663.8 725.6 491.2 915.3 623 361 2.9 1 FALSE 1.14E-05 1.31E-06 1.215 -250 111698 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGVMVAK [RK].eGVMVAk.[K] N-Term(TMT6plex); K7(TMT6plex) 10 P63325; A0A3B2W864; Q9QXS1 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3" Q499F9; A0A338P731; P63325; A0A0R4J218; Q9QXS1-2; Q3UW83; A0A338P7K4; Q3U9P0; A0A3B2W864; Q9QXS1 "Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; 40S ribosomal protein S10 (Fragment) OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; S10_plectin domain-containing protein OS=Mus musculus OX=10090 GN=Rps10 PE=2 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3" 0 2 2 0.2955 0 1 1 1 596.36127 1191.71526 1191.71715 -1.59 -0.00095 0/0 0 0 25758578 HCD 30 MS2 41.70263 1551.5 53.06 73.602 22483 22483 22478 QEplus033719.raw F4 1675 1327.1 1700.7 1210.9 1746.9 1648.2 379 2.64 3 FALSE 0.0006035 0.008931 0.422 -250 111725 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQLEETDHQK [R].lQLEETDHQk.[S] N-Term(TMT6plex); K10(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.6509 0 1 1 1 849.97406 1698.94084 1698.94267 -1.08 -0.00091 0/0 0 0 6180429 HCD 30 MS2 0 385.8 110 73.6118 22487 22487 22478 QEplus033719.raw F4 384.1 314.5 400.3 374.9 401.4 439.9 367 4.24 2 FALSE 1.14E-05 1.19E-05 1.033 -250 111744 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STCIYGGAPK [K].sTcIYGGAPk.[G] N-Term(TMT6plex); C3(Carbamidomethyl); K10(TMT6plex) 11 Q5U222; Q501J6 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1;Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1 Q3UXW3; Q5U222; Q3TU25; Q3V0Z8; Q501J6; Q3U741; A1L333; Q501J6-2; S4R1I6; Q61656; Q8BTS0 RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Isoform 2 of Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 0 3 3 0.6912 0 1 1 1 504.61499 1511.83042 1511.82922 0.79 0.0004 0/0 0 0 15478113 HCD 30 MS2 65.73217 1303.6 52.394 73.6213 22490 22490 22489 QEplus033719.raw F4 1495.5 1008.6 1333.8 1251.4 1354.2 1378.2 327 3.53 2 FALSE 1.14E-05 6.89E-05 0.888 -250 111762 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QFFDER [R].qFFDER.[W] N-Term(TMT6plex) 9 A2BFF8 Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1 A2BFF8; D6Q0F6; Q3TPJ8; D6Q0F5; D6Q0F7; A2BFF9; A2BFF5; A2BFF7; Q3UDA2 Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1; Cytoplasmic dynein intermediate chain 2 isoform 2.2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=2 SV=1; Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1; Cytoplasmic dynein intermediate chain 2 isoform 2.1 OS=Mus musculus OX=10090 GN=Dync1i2 PE=2 SV=1; Cytoplasmic dynein intermediate chain 2 isoform 2.5 OS=Mus musculus OX=10090 GN=Dync1i2 PE=2 SV=1; Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1; Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1; Dynein cytoplasmic 1 intermediate chain 2 OS=Mus musculus OX=10090 GN=Dync1i2 PE=1 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1i2 PE=2 SV=1 0 2 2 0.5415 0 1 1 1 535.7774 1070.54753 1070.54683 0.66 0.00035 0/0 0 0 30025156 HCD 30 MS2 47.73756 998.1 33.694 73.6281 22493 22493 22489 QEplus033719.raw F4 944.1 880.2 1090.3 862.3 1122.3 1089.1 92 2.29 1 FALSE 0.003608 0.06925 0.09 -250 111770 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GFVQVDDGRK [K].gFVQVDDGRk.[I] N-Term(TMT6plex); K10(TMT6plex) 3 Q9D0I9 "Arginine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Rars1 PE=1 SV=2" Q3UAZ3; Q3TVC5; Q9D0I9 "Arginine--tRNA ligase (Fragment) OS=Mus musculus OX=10090 GN=Rars PE=2 SV=1; Arginine--tRNA ligase, cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Rars PE=2 SV=1; Arginine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Rars1 PE=1 SV=2" 1 3 3 0.6076 0 1 1 1 526.97168 1578.90049 1578.90041 0.05 0.00002 0/0 0 0 28645454 HCD 30 MS2 41.78355 1270.6 44.232 73.6304 22494 22494 22489 QEplus033719.raw F4 1289.9 1049.8 1390.2 1084.8 1438.4 1370.2 455 3.44 1 FALSE 0.0002218 0.004579 0.512 -250 111776 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQLAMVER [K].eQLAMVER.[R] N-Term(TMT6plex) 7 Q5SX40; Q5SX39 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1 Q9ESW6; Q5SX40; Q5SX39; G3UW82; B2RWX0; Q3TT35; Q9JHR4 "Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin heavy chain IIB (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1" 0 2 2 0.3591 0 1 1 1 602.83148 1204.65569 1204.65572 -0.03 -0.00002 0/0 0 0 23649358 HCD 30 MS2 27.13302 1167.1 76.969 73.6326 22495 22495 22489 QEplus033719.raw F4 1290.8 596.9 897.6 2000.7 776.9 1439.6 317 2.59 2 FALSE 1.14E-05 0.0002627 0.777 -250 111785 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ICDQWDR [K].icDQWDR.[L] N-Term(TMT6plex); C2(Carbamidomethyl) 2 Q9JI91 Alpha-actinin-2 OS=Mus musculus OX=10090 GN=Actn2 PE=1 SV=2 Q9JI91; Q8K3Q4 Alpha-actinin-2 OS=Mus musculus OX=10090 GN=Actn2 PE=1 SV=2; Actinin alpha 2 OS=Mus musculus OX=10090 GN=Actn2 PE=2 SV=1 0 2 2 0.6399 0 1 1 1 611.29834 1221.5894 1221.58837 0.84 0.00052 0/0 0 0 21640392 HCD 30 MS2 25.63028 1008.2 82.182 73.6349 22496 22496 22489 QEplus033719.raw F4 1094.7 448.6 997.2 1230.9 676.2 1601.3 70 2.86 1 FALSE 0.0007056 0.01017 0.402 -250 111790 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETWLSENQR [R].eTWLSENQR.[L] N-Term(TMT6plex) 8 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q62261; Q3TZN6; Q68FG2; Q3UGZ4; A0A0A0MQG2; Q5DTR4; Q6A087; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Spectrin beta chain OS=Mus musculus OX=10090 GN=Sptbn2 PE=1 SV=1; Spectrin beta chain OS=Mus musculus OX=10090 GN=Sptbn2 PE=2 SV=1; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; MKIAA4049 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; MKIAA0302 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn2 PE=2 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 2 2 0.6637 0 1 1 1 696.36096 1391.71465 1391.71166 2.15 0.00149 0/0 0 0 16733269 HCD 30 MS2 43.40796 969.1 110 73.6375 22497 22497 22489 QEplus033719.raw F4 1008.5 859.3 1095.5 795.9 1040.7 1014.9 229 3.36 2 FALSE 1.14E-05 0.0001006 0.857 -250 111798 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATATACRPCPCPYIDASR [K].aTATAcRPcPcPYIDASR.[R] N-Term(TMT6plex); C6(Carbamidomethyl); C9(Carbamidomethyl); C11(Carbamidomethyl) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 3 3 0.7581 0 1 1 1 766.03241 2296.08268 2296.08341 -0.32 -0.00024 0/0 0 0 11770867 HCD 30 MS2 0 376.8 110 73.64 22498 22498 22489 QEplus033719.raw F4 360.6 364.2 534.3 402.2 256.9 342.6 94 4.92 2 FALSE 1.14E-05 1.94E-12 2.322 -250 111808 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPATTLPK [R].sPATTLPk.[R] N-Term(TMT6plex); K8(TMT6plex) 10 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; A0A0G2JFT4; A0A0G2JG35; A0A140T8T5; P27546-3; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 2 2 0.2764 0 1 1 1 636.90051 1272.79375 1272.79276 0.78 0.0005 0/0 0 0 14424668 HCD 30 MS2 36.53396 1163.4 110 73.6425 22499 22499 22489 QEplus033719.raw F4 1207.7 1048.3 1234 849.6 1475.4 1165.6 386 2.75 2 FALSE 5.44E-05 0.002642 0.571 -250 111817 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAAVQPPEEGPSRK [K].vAAVQPPEEGPSRk.[D] N-Term(TMT6plex); K14(TMT6plex) 7 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 1 3 3 0.5972 0 1 1 1 641.70691 1923.10617 1923.10638 -0.11 -0.00007 0/0 0 0 28136554 HCD 30 MS2 4.639876 1075.5 110 73.6498 22501 22501 22500 QEplus033719.raw F4 1085.4 914 1215.8 851.5 1202.9 1183.2 409 5.04 1 FALSE 1.14E-05 4.33E-11 2.066 -250 111826 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAETYLHR [K].lAETYLHR.[I] N-Term(TMT6plex) 1 P54823 Probable ATP-dependent RNA helicase DDX6 OS=Mus musculus OX=10090 GN=Ddx6 PE=1 SV=1 P54823 Probable ATP-dependent RNA helicase DDX6 OS=Mus musculus OX=10090 GN=Ddx6 PE=1 SV=1 0 3 3 0.591 0 1 1 1 411.23767 1231.69846 1231.69964 -0.96 -0.00039 0/0 0 0 15997688 HCD 30 MS2 15.16105 411.3 86.204 73.652 22502 22502 22500 QEplus033719.raw F4 377.4 357.8 431.4 335.8 497.8 467.8 333 4.01 1 FALSE 1.14E-05 1.82E-05 0.998 -250 111856 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DRAGSIVLK [K].dRAGSIVLk.[V] N-Term(TMT6plex); K9(TMT6plex) 4 Q9CPW4 Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=1 SV=3 Q3TK56; Q9CPW4; Q3UC32; Q3TKM9 Actin-related protein 2/3 complex subunit 5 (Fragment) OS=Mus musculus OX=10090 GN=Arpc5 PE=2 SV=1; Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=1 SV=3; Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=2 SV=1; Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=2 SV=1 1 3 3 0.5076 0 1 1 1 472.96976 1416.89472 1416.89387 0.6 0.00028 0/0 0 0 30073288 HCD 30 MS2 29.29148 1029.8 42.937 73.6658 22508 22508 22500 QEplus033719.raw F4 1088.1 943.2 1086.8 696.3 1318.1 1046.1 287 3.31 1 FALSE 1.14E-05 0.0001401 0.829 -250 111883 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMHLMK [R].aMHLMk.[K] N-Term(TMT6plex); K6(TMT6plex) 1 Q9WV03 Protein FAM50A OS=Mus musculus OX=10090 GN=Fam50a PE=1 SV=1 Q9WV03 Protein FAM50A OS=Mus musculus OX=10090 GN=Fam50a PE=1 SV=1 0 3 3 0.4644 0 1 1 1 396.90524 1188.70118 1188.69973 1.22 0.00048 0/0 0 0 8275128.5 HCD 30 MS2 37.47869 585.3 78.907 73.6801 22513 22513 22511 QEplus033719.raw F4 529.5 572.7 657.3 367.8 745.6 639.2 405 2.67 1 FALSE 0.002064 0.03758 0.183 -250 111891 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IEGDPQGVQQAK [R].iEGDPQGVQQAk.[R] N-Term(TMT6plex); K12(TMT6plex) 4 Q8VDJ3 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1 Q8VDJ3; A0PJE9; A0A087WP83; Q3V1M8 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Hdlbp protein (Fragment) OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1; Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1 0 3 3 0.6629 0 1 1 1 576.66187 1727.97104 1727.96922 1.06 0.00061 0/0 0 0 14992907 HCD 30 MS2 32.40283 998.2 110 73.6848 22515 22515 22511 QEplus033719.raw F4 1051.2 789 982.5 907 1132 1127.7 415 3.5 1 FALSE 1.14E-05 2.26E-06 1.17 -250 111898 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MACGLGGK [R].mAcGLGGk.[L] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 3 Q8BKC5 Importin-5 OS=Mus musculus OX=10090 GN=Ipo5 PE=1 SV=3 Q8BKC5-2; Q7TN23; Q8BKC5 Isoform 2 of Importin-5 OS=Mus musculus OX=10090 GN=Ipo5; Ipo5 protein (Fragment) OS=Mus musculus OX=10090 GN=Ipo5 PE=2 SV=1; Importin-5 OS=Mus musculus OX=10090 GN=Ipo5 PE=1 SV=3 0 2 2 0.3033 0 1 1 1 626.34778 1251.68828 1251.69537 -5.66 -0.00355 0/0 0 0 14558216 HCD 30 MS2 31.42878 1338.5 110 73.6874 22516 22516 22511 QEplus033719.raw F4 1275.4 1030.4 1479.3 1067.4 1609.5 1568.9 284 2.44 1 FALSE 4.43E-05 0.001469 0.627 -250 111906 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQMEQQQQLQQR [K].lQMEQQQQLQQR.[Q] N-Term(TMT6plex) 3 Q9CPQ3 Mitochondrial import receptor subunit TOM22 homolog OS=Mus musculus OX=10090 GN=Tomm22 PE=1 SV=3 A0A2R8VHM4; Q3UBW3; Q9CPQ3 Mitochondrial import receptor subunit TOM22 homolog OS=Mus musculus OX=10090 GN=Tomm22 PE=1 SV=1; Mitochondrial import receptor subunit TOM22 homolog OS=Mus musculus OX=10090 GN=Tomm22 PE=2 SV=1; Mitochondrial import receptor subunit TOM22 homolog OS=Mus musculus OX=10090 GN=Tomm22 PE=1 SV=3 0 2 2 0.7836 0 1 1 1 893.97559 1786.9439 1786.94313 0.43 0.00038 0/0 0 0 4782295 HCD 30 MS2 0 230.5 110 73.6899 22517 22517 22511 QEplus033719.raw F4 234 187 264.9 203.4 203.6 290 338 5.13 1 FALSE 1.14E-05 3.30E-11 2.088 -250 111915 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQDIPEETESR [R].mQDIPEETESR.[D] N-Term(TMT6plex) 9 H3BJU7 Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1 H3BJU7; H3BKH9; Q60875; Q60875-5; H3BJX8; H3BJ40; H3BJ45; A0A2X0SFE2; Q60875-4 Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=4; Isoform 5 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=2; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Guanine nucleotide exchange factor H1 (Fragment) OS=Mus musculus OX=10090 GN=ARHGEF2 PE=4 SV=1; Isoform 4 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2 0 2 2 0.7554 0 1 1 1 782.38007 1563.75286 1563.7522 0.42 0.00033 0/0 0 0 2744132.25 HCD 30 MS2 0 255.2 110 73.6924 22518 22518 22511 QEplus033719.raw F4 262.6 218 284.9 209.6 284 272.1 82 3.68 1 FALSE 1.14E-05 2.59E-07 1.349 -250 111920 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNTPIKVDGK [R].sNTPIkVDGk.[D] N-Term(TMT6plex); K6(TMT6plex); K10(TMT6plex) 2 P06745 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4 B2RXT5; P06745 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4 1 3 3 0.3951 0 1 1 1 582.69647 1746.07486 1746.07285 1.16 0.00067 0/0 0 0 36817188 HCD 30 MS2 41.69126 1380.1 44.173 73.6947 22519 22519 22511 QEplus033719.raw F4 1389.8 1338.6 1519.8 1326 1373.6 1332.6 341 1.62 1 FALSE 0.00198 0.03433 0.197 -250 111925 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLIAAHGNSLR [R].vLIAAHGNSLR.[G] N-Term(TMT6plex) 3 Q3U7Z6; Q5NCI4 Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam1 PE=1 SV=1;Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam2 PE=1 SV=1 Q3U7Z6; Q6NWV5; Q5NCI4 Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam1 PE=1 SV=1; Pgam1 protein (Fragment) OS=Mus musculus OX=10090 GN=Pgam1 PE=2 SV=1; Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam2 PE=1 SV=1 0 3 3 0.6183 0 1 1 1 460.61572 1379.83261 1379.83205 0.41 0.00019 0/0 0 0 32000206 HCD 30 MS2 26.83215 642.3 46.763 73.6969 22520 22520 22511 QEplus033719.raw F4 747.2 412.8 659.2 733.1 600.5 700.9 330 5.03 2 FALSE 1.14E-05 3.20E-10 1.901 -250 111935 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FNEVSQK [K].fNEVSQk.[C] N-Term(TMT6plex); K7(TMT6plex) 3 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q60784 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Fibrillin-1 (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1 0 2 2 0.5074 0 1 1 1 655.37891 1309.75054 1309.75162 -0.83 -0.00054 0/0 0 0 10579567 HCD 30 MS2 45.59151 1175.4 110 73.6995 22521 22521 22511 QEplus033719.raw F4 1285.1 884.1 1313.9 1261.6 936.4 1371.1 389 2.72 1 FALSE 0.0002419 0.005005 0.501 -250 111943 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTLTPEEEAR [K].vTLTPEEEAR.[L] N-Term(TMT6plex) 9 A0A1B0GSX0 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1 Q3TI99; Q3THB4; Q3UIC3; Q3UDU4; Q99K20; A0A1B0GSR9; Q3TCI7; A0A1B0GSX0; P06151 L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase (Fragment) OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=2 SV=1; L-lactate dehydrogenase OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3 0 2 2 0.5934 0 1 1 1 687.37787 1373.74846 1373.74738 0.79 0.00054 0/0 0 0 112432528 HCD 30 MS2 3.495038 488.8 16.152 73.7068 22523 22523 22522 QEplus033719.raw F4 489.5 372.8 479.3 544.9 494.2 552.2 324 3.96 1 FALSE 1.14E-05 6.24E-06 1.086 -250 111948 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQTEAGELSR [R].lQTEAGELSR.[Q] N-Term(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 0 2 2 0.5782 0 1 1 1 666.87042 1332.73357 1332.73206 1.13 0.00075 0/0 0 0 31941868 HCD 30 MS2 8.522917 512.8 51.978 73.709 22524 22524 22522 QEplus033719.raw F4 520.7 211.9 429.2 855.5 274.5 785 353 3.39 1 FALSE 1.14E-05 4.81E-08 1.488 -250 111958 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGEDFVK [K].kGEDFVk.[N] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 1 P08249 "Malate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Mdh2 PE=1 SV=3" P08249 "Malate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Mdh2 PE=1 SV=3" 1 3 3 0.2707 0 1 1 1 503.97989 1509.92511 1509.92439 0.48 0.00024 0/0 0 0 90999576 HCD 30 MS2 18.4549 1572.3 20.745 73.7113 22525 22525 22522 QEplus033719.raw F4 1804.4 1169.3 1533.3 1730.7 1388.5 1807.5 277 3.14 1 FALSE 0.0006294 0.009534 0.412 -250 111973 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATVGLIR [K].aTVGLIR.[N] N-Term(TMT6plex) 5 Q02248 Catenin beta-1 OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1 F7BAC9; Q80VE7; Q02248; E9Q6A9; Q3UZT7 Catenin beta-1 (Fragment) OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1; Ctnnb1 protein (Fragment) OS=Mus musculus OX=10090 GN=Ctnnb1 PE=2 SV=1; Catenin beta-1 OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1; Catenin beta-1 OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctnnb1 PE=2 SV=1 0 2 2 0.1867 0 1 1 1 479.81656 958.62584 958.62468 1.21 0.00058 0/0 0 0 35305864 HCD 30 MS2 45.14334 846.4 33.087 73.7158 22527 22527 22522 QEplus033719.raw F4 874.8 619 971.6 541.6 1132.4 939.3 72 2.25 1 FALSE 0.002696 0.05377 0.131 -250 111983 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLSPEAVR [R].vLSPEAVR.[N] N-Term(TMT6plex) 4 D3Z7P3 "Glutaminase kidney isoform, mitochondrial OS=Mus musculus OX=10090 GN=Gls PE=1 SV=1" D3Z7P3-2; D3Z7P4; D3Z7P3; F6U529 "Isoform 2 of Glutaminase kidney isoform, mitochondrial OS=Mus musculus OX=10090 GN=Gls; Glutaminase OS=Mus musculus OX=10090 GN=Gls PE=1 SV=1; Glutaminase kidney isoform, mitochondrial OS=Mus musculus OX=10090 GN=Gls PE=1 SV=1; Glutaminase (Fragment) OS=Mus musculus OX=10090 GN=Gls PE=1 SV=1" 0 2 2 0.5 0 1 1 1 550.33807 1099.66887 1099.66727 1.45 0.0008 0/0 0 0 24629748 HCD 30 MS2 10.96902 1194.6 87.33 73.7181 22528 22528 22522 QEplus033719.raw F4 1241.9 1032.3 1341.7 1012.6 1167.8 1371 202 2.78 1 FALSE 0.001851 0.03145 0.209 -250 111987 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPATTLPK [R].sPATTLPk.[R] N-Term(TMT6plex); K8(TMT6plex) 10 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; A0A0G2JFT4; A0A0G2JG35; A0A140T8T5; P27546-3; P27546-4; A0A0G2JDN7; E9PZ43 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 3 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Isoform 4 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3 0 3 3 0.1677 0 1 1 1 424.93588 1272.79309 1272.79276 0.26 0.00011 0/0 0 0 17202696 HCD 30 MS2 35.46462 818.5 61.458 73.7203 22529 22529 22522 QEplus033719.raw F4 858.5 633.4 902.5 642.4 951.7 922.5 382 3.28 2 FALSE 0.001658 0.0271 0.232 -250 112004 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IEGDPQGVQQAK [R].iEGDPQGVQQAk.[R] N-Term(TMT6plex); K12(TMT6plex) 4 Q8VDJ3 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1 Q8VDJ3; A0PJE9; A0A087WP83; Q3V1M8 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Hdlbp protein (Fragment) OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1; Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1 0 2 2 0.5833 0 1 1 1 864.48877 1727.97026 1727.96922 0.6 0.00052 0/0 0 0 7857741 HCD 30 MS2 0 468.1 110 73.7279 22532 22532 22522 QEplus033719.raw F4 485.2 434.9 519.4 347.5 568.9 452.8 408 4.68 1 FALSE 1.14E-05 1.06E-11 2.182 -250 112013 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPADLPK [K].nPADLPk.[L] N-Term(TMT6plex); K7(TMT6plex) 17 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q3TSK4; Q8C153; P58252; O89070; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3TPG2; Q3UZ14; Q3TK17; Q3TLB1; Q3TWX1; Q3TX47 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Elongation factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 0 2 2 0.5906 0 1 1 1 606.87152 1212.73577 1212.73524 0.43 0.00026 0/0 0 0 158817296 HCD 30 MS2 7.49212 640.6 8.138 73.7352 22534 22534 22533 QEplus033719.raw F4 629.2 433.6 759 540 677.2 804.5 211 2.54 1 FALSE 0.001101 0.01423 0.342 -250 112018 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQNVLGEK [R].tQNVLGEk.[G] N-Term(TMT6plex); K8(TMT6plex) 7 Q5YLW3 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1 Q9D0A2; D3YV43; Q9CZP6; Q3UCL7; Q5YLW3; Q3UK56; A0A140LI77 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=2 SV=1; 40S ribosomal protein S3 OS=Mus musculus OX=10090 GN=Rps3 PE=1 SV=1 0 2 2 0.3868 0 1 1 1 673.90863 1346.80998 1346.80439 4.16 0.0028 0/0 0 0 14727235 HCD 30 MS2 5.180287 1107.7 110 73.7377 22535 22535 22533 QEplus033719.raw F4 1023.5 903.4 1223 990.1 1216.6 1289.4 522 3.49 1 FALSE 1.14E-05 0.000178 0.809 -250 112027 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLQGMCVGER [R].gLQGMcVGER.[R] N-Term(TMT6plex); C6(Carbamidomethyl) 3 Q61576 Peptidyl-prolyl cis-trans isomerase FKBP10 OS=Mus musculus OX=10090 GN=Fkbp10 PE=1 SV=2 Q61576; A2A4H9; Q3UNJ3 Peptidyl-prolyl cis-trans isomerase FKBP10 OS=Mus musculus OX=10090 GN=Fkbp10 PE=1 SV=2; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp10 PE=1 SV=1; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp10 PE=2 SV=1 0 2 2 0.6433 0 1 1 1 668.3396 1335.67192 1335.67106 0.65 0.00043 0/0 0 0 31828514 HCD 30 MS2 50.51122 1085.3 53.361 73.74 22536 22536 22533 QEplus033719.raw F4 1015.2 918.4 1187.4 932.3 1322.1 1136.5 164 3 1 FALSE 1.14E-05 6.38E-06 1.085 -250 112035 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FLDAGHK [K].fLDAGHk.[L] N-Term(TMT6plex); K7(TMT6plex) 1 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 0 2 2 0.2297 0 1 1 1 623.37256 1245.73784 1245.73558 1.82 0.00113 0/0 0 0 15862766 HCD 30 MS2 20.49438 1249 110 73.7448 22538 22538 22533 QEplus033719.raw F4 1288.9 1095.4 1321.5 984.5 1489.3 1314.5 437 2.22 1 FALSE 0.0007436 0.01059 0.395 -250 112043 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAVIVK [R].kAVIVk.[N] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 1 P61358 60S ribosomal protein L27 OS=Mus musculus OX=10090 GN=Rpl27 PE=1 SV=2 P61358 60S ribosomal protein L27 OS=Mus musculus OX=10090 GN=Rpl27 PE=1 SV=2 1 3 3 0.1571 0 1 1 1 448.99002 1344.95551 1344.95457 0.7 0.00031 0/0 0 0 12922113 HCD 30 MS2 43.74008 988.9 66.306 73.747 22539 22539 22533 QEplus033719.raw F4 850 1010.3 1205.4 1038.7 935.9 893.2 35 3.12 1 FALSE 0.001142 0.01535 0.328 -250 112044 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAVLVK [R].kAVLVk.[N] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 1 P28665 Murinoglobulin-1 OS=Mus musculus OX=10090 GN=Mug1 PE=1 SV=3 1 3 3 0.1571 0 1 2 2 448.99002 1344.95551 1344.95457 0.7 0.00031 0/0 0 0 12922113 HCD 30 MS2 43.74008 988.9 66.306 73.747 22539 22539 22533 QEplus033719.raw F4 850 1010.3 1205.4 1038.7 935.9 893.2 35 3.12 0 FALSE 0.001142 0.01535 0.328 -250 112053 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVPPLRR [R].lVPPLRR.[L] N-Term(TMT6plex) 5 Q8C0E3 E3 ubiquitin-protein ligase TRIM47 OS=Mus musculus OX=10090 GN=Trim47 PE=1 SV=2 Q8C0E3-2; B7ZN75; Q8C0E3; Q497Z1; A3KMJ7 Isoform 2 of E3 ubiquitin-protein ligase TRIM47 OS=Mus musculus OX=10090 GN=Trim47; Trim47 protein OS=Mus musculus OX=10090 GN=Trim47 PE=2 SV=1; E3 ubiquitin-protein ligase TRIM47 OS=Mus musculus OX=10090 GN=Trim47 PE=1 SV=2; Trim47 protein (Fragment) OS=Mus musculus OX=10090 GN=Trim47 PE=2 SV=1; Tripartite motif-containing 47 OS=Mus musculus OX=10090 GN=Trim47 PE=2 SV=1 1 3 3 0.3417 0 1 1 1 360.58014 1079.72586 1079.72506 0.74 0.00027 0/0 0 0 5237440.5 HCD 30 MS2 44.57478 313.6 110 73.7495 22540 22540 22533 QEplus033719.raw F4 278.4 276.2 377.2 223.2 326.6 400.1 4 2.78 1 FALSE 0.003817 0.07233 0.082 -250 112130 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FSGDLDDQTCR [K].fSGDLDDQTcR.[E] N-Term(TMT6plex); C10(Carbamidomethyl) 5 P32067 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 P32067; Q3TG93; Q9CYB9; Q8BTU4; F6SXM5 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; HTH La-type RNA-binding domain-containing protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Lupus La protein homolog (Fragment) OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 0 2 2 0.7683 0 1 1 1 771.85632 1542.70537 1542.70559 -0.14 -0.00011 0/0 0 0 7597103.5 HCD 30 MS2 0 398.8 110 73.7779 22551 22551 22544 QEplus033719.raw F4 396.7 361.9 443.8 332.2 430.3 427.8 36 4.23 1 FALSE 1.14E-05 3.28E-08 1.519 -250 112163 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSMDLR [K].vSMDLR.[A] N-Term(TMT6plex) 3 F6QC77 "Troponin I, slow skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1" F6QC77; Q9WUZ5; D3YUN3 "Troponin I, slow skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1; Troponin I, slow skeletal muscle OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=3; Troponin I, slow skeletal muscle OS=Mus musculus OX=10090 GN=Tnni1 PE=1 SV=1" 0 2 2 0.2857 0 1 1 1 475.27121 949.53514 949.53382 1.4 0.00066 0/0 0 0 47035120 HCD 30 MS2 17.06337 806.5 28.936 73.7975 22558 22558 22555 QEplus033719.raw F4 766.7 354.1 1078.8 848.1 392.1 1399.1 142 1.96 1 FALSE 0.007997 0.1328 -0.064 -250 112169 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSGPGVEPHGVLR [K].vSGPGVEPHGVLR.[E] N-Term(TMT6plex) 2 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q8VHX6-2; Q8VHX6 Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 3 3 0.7566 0 1 1 1 511.62982 1532.87491 1532.87464 0.18 0.00009 0/0 0 0 39603912 HCD 30 MS2 15.44614 793.7 45.376 73.7998 22559 22559 22555 QEplus033719.raw F4 742.2 658.8 879 700.6 927.4 853.9 512 4.93 1 FALSE 1.14E-05 1.88E-10 1.945 -250 112176 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AINVQEEK [K].aINVQEEk.[I] N-Term(TMT6plex); K8(TMT6plex) 9 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; B2RXX6; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.382 0 1 1 1 694.9126 1388.81792 1388.81495 2.14 0.00148 0/0 0 0 15554145 HCD 30 MS2 0 1077.1 110 73.8046 22561 22561 22555 QEplus033719.raw F4 1098.6 985.8 1331.9 822.6 991.5 1232 506 3.56 2 FALSE 1.14E-05 9.67E-05 0.86 -250 112193 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSARPEAPGPAVPEPASVR [R].nSARPEAPGPAVPEPASVR.[E] N-Term(TMT6plex) 3 Q8BWB1; D3YU08 Synaptopodin 2-like protein OS=Mus musculus OX=10090 GN=Synpo2l PE=1 SV=1;Synaptopodin 2-like protein OS=Mus musculus OX=10090 GN=Synpo2l PE=1 SV=1 Q8BWB1; D3YU08; B2RQK7 Synaptopodin 2-like protein OS=Mus musculus OX=10090 GN=Synpo2l PE=1 SV=1; Synaptopodin 2-like protein OS=Mus musculus OX=10090 GN=Synpo2l PE=1 SV=1; Synaptopodin 2-like protein OS=Mus musculus OX=10090 GN=Synpo2l PE=1 SV=1 0 3 3 0.4972 0 1 1 1 711.05365 2131.1464 2131.14573 0.31 0.00022 0/0 0 0 5100820.5 HCD 30 MS2 17.14698 450 110 73.8096 22563 22563 22555 QEplus033719.raw F4 451.7 355.7 541.5 387.9 390 573.2 441 5.27 2 FALSE 1.14E-05 4.72E-13 2.439 -250 112198 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LCNTPLASR [R].lcNTPLASR.[E] N-Term(TMT6plex); C2(Carbamidomethyl) 6 E0CZD9 Zinc finger protein-like 1 (Fragment) OS=Mus musculus OX=10090 GN=Zfpl1 PE=1 SV=1 E0CZD9; A0A494B9Y9; E0CXR3; Q9DB43; E0CXM9; E0CX79 Zinc finger protein-like 1 (Fragment) OS=Mus musculus OX=10090 GN=Zfpl1 PE=1 SV=1; Zinc finger protein-like 1 OS=Mus musculus OX=10090 GN=Zfpl1 PE=1 SV=1; Zinc finger protein-like 1 (Fragment) OS=Mus musculus OX=10090 GN=Zfpl1 PE=1 SV=8; Zinc finger protein-like 1 OS=Mus musculus OX=10090 GN=Zfpl1 PE=1 SV=1; Zinc finger protein-like 1 (Fragment) OS=Mus musculus OX=10090 GN=Zfpl1 PE=1 SV=1; Zinc finger protein-like 1 (Fragment) OS=Mus musculus OX=10090 GN=Zfpl1 PE=1 SV=1 0 2 2 0.5401 0 1 1 1 630.84808 1260.68889 1260.69317 -3.4 -0.00214 0/0 0 0 6377853.5 HCD 30 MS2 24.22907 837.4 110 73.8121 22564 22564 22555 QEplus033719.raw F4 776.5 681.8 969.3 712.1 900.4 984.3 317 2.37 1 FALSE 0.0003211 0.006241 0.473 -250 112204 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCCQEEAQFETK [R].gccQEEAQFETk.[K] N-Term(TMT6plex); C2(Carbamidomethyl); C3(Carbamidomethyl); K12(TMT6plex) 4 Q9ERR7 Selenoprotein F OS=Mus musculus OX=10090 GN=Selenof PE=1 SV=3 Q9ERR7; A0A1C7ZMY4; A0A0R4J0K1; A0A0G2JEF3 Selenoprotein F OS=Mus musculus OX=10090 GN=Selenof PE=1 SV=3; Selenoprotein F OS=Mus musculus OX=10090 GN=Selenof PE=1 SV=1; Selenoprotein F OS=Mus musculus OX=10090 GN=Selenof PE=1 SV=1; Selenoprotein F (Fragment) OS=Mus musculus OX=10090 GN=Selenof PE=1 SV=1 0 3 3 0.7589 0 1 1 1 648.97815 1944.91989 1944.91957 0.17 0.00011 0/0 0 0 6162352.5 HCD 30 MS2 20.07444 465.7 110 73.8146 22565 22565 22555 QEplus033719.raw F4 436 404.7 529.1 378.5 521.7 523.9 88 4.19 1 FALSE 1.14E-05 9.55E-09 1.621 -250 112212 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATLPDADK [K].aTLPDADk.[E] N-Term(TMT6plex); K8(TMT6plex) 3 A1BN54; Q7TPR4 Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1;Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 Q99LJ3; A1BN54; Q7TPR4 Actn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Actn1 PE=2 SV=1; Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1; Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 0 2 2 0.1266 0 1 1 1 644.87976 1288.75224 1288.75129 0.74 0.00048 0/0 0 0 10752588 HCD 30 MS2 45.55727 1223.8 110 73.8219 22567 22567 22566 QEplus033719.raw F4 1189 796 1307.4 1224.8 1113.2 1712.5 486 3.08 2 FALSE 1.14E-05 0.0005634 0.712 -250 112219 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLIAAHGNSLR [R].vLIAAHGNSLR.[G] N-Term(TMT6plex) 3 Q3U7Z6; Q5NCI4 Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam1 PE=1 SV=1;Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam2 PE=1 SV=1 Q3U7Z6; Q6NWV5; Q5NCI4 Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam1 PE=1 SV=1; Pgam1 protein (Fragment) OS=Mus musculus OX=10090 GN=Pgam1 PE=2 SV=1; Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam2 PE=1 SV=1 0 2 2 0.4806 0 1 1 1 690.4173 1379.82732 1379.83205 -3.43 -0.00237 0/0 0 0 7238148 HCD 30 MS2 0 473.6 110 73.8244 22568 22568 22566 QEplus033719.raw F4 490.7 326.8 440 665.7 422.7 495.5 308 3.1 2 FALSE 1.14E-05 1.76E-06 1.191 -250 112237 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVLIRPCSK [R].qVLIRPcSk.[V] N-Term(TMT6plex); C7(Carbamidomethyl); K9(TMT6plex) 4 Q5M9M4 40S ribosomal protein S15a OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=1 D3Z712; D3YVB4; F8WJ41; Q5M9M4 40S ribosomal protein S15a (Fragment) OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=2; 40S ribosomal protein S15a (Fragment) OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=1; 40S ribosomal protein S15a (Fragment) OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=1; 40S ribosomal protein S15a OS=Mus musculus OX=10090 GN=Rps15a PE=1 SV=1 0 3 3 0.5837 0 1 1 1 520.3222 1558.95206 1558.95034 1.1 0.00057 0/0 0 0 56007416 HCD 30 MS2 9.079915 1018.4 31.597 73.8289 22570 22570 22566 QEplus033719.raw F4 1000.9 1013.4 1238.9 884.2 935.7 1037.5 363 2.57 1 FALSE 1.14E-05 3.38E-05 0.947 -250 112292 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVNHLEK [R].iVNHLEk.[E] N-Term(TMT6plex); K7(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 3 3 0.25 0 1 1 1 437.61285 1310.82401 1310.81964 3.33 0.00146 0/0 0 0 6777588.5 HCD 30 MS2 66.45762 816.2 61.057 73.8505 22578 22578 22577 QEplus033719.raw F4 816.3 552.6 832.9 717.4 873.4 1104.3 127 2.4 1 FALSE 0.002024 0.0354 0.192 -250 112302 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTGEVTDPSGK [K].vTGEVTDPSGk.[V] N-Term(TMT6plex); K11(TMT6plex) 2 Q3B7Z2 Oxysterol-binding protein 1 OS=Mus musculus OX=10090 GN=Osbp PE=1 SV=3 Q3B7Z2; Q3B7Z2-2 Oxysterol-binding protein 1 OS=Mus musculus OX=10090 GN=Osbp PE=1 SV=3; Isoform 2 of Oxysterol-binding protein 1 OS=Mus musculus OX=10090 GN=Osbp 0 2 2 0.5141 0 1 1 1 774.43817 1547.86907 1547.86811 0.62 0.00048 0/0 0 0 3783145.25 HCD 30 MS2 0 275.7 110 73.8531 22579 22579 22577 QEplus033719.raw F4 283 206.4 301.4 244.7 281.2 337.6 423 2.84 1 FALSE 1.14E-05 1.90E-06 1.185 -250 112312 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVENSSTAIGIR [K].aVENSSTAIGIR.[C] N-Term(TMT6plex) 2 Q9DCD8 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1 Q9DCD8; O70435 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1; Proteasome subunit alpha type-3 OS=Mus musculus OX=10090 GN=Psma3 PE=1 SV=3 0 2 2 0.235 0 1 1 1 723.91394 1446.8206 1446.81137 6.38 0.00462 0/0 0 0 28202460 HCD 30 MS2 19.51691 727.1 66.723 73.8576 22581 22581 22577 QEplus033719.raw F4 688.3 632.8 812.9 576.4 861.2 791.2 457 3.49 1 FALSE 1.14E-05 4.86E-07 1.297 -250 112344 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HVMLPK [R].hVMLPk.[D] N-Term(TMT6plex); K6(TMT6plex) 4 Q9D0L3 Cyclin-dependent kinases regulatory subunit OS=Mus musculus OX=10090 GN=Cks1b PE=2 SV=1 Q9D0L3; P61025; Q3UNC9; Q9D108 Cyclin-dependent kinases regulatory subunit OS=Mus musculus OX=10090 GN=Cks1b PE=2 SV=1; Cyclin-dependent kinases regulatory subunit 1 OS=Mus musculus OX=10090 GN=Cks1b PE=3 SV=1; Cyclin-dependent kinases regulatory subunit OS=Mus musculus OX=10090 GN=Cks1brt PE=2 SV=1; Cyclin-dependent kinases regulatory subunit OS=Mus musculus OX=10090 GN=Cks1b PE=2 SV=1 0 3 3 0.5261 0 1 1 1 394.91879 1182.74182 1182.74331 -1.25 -0.00049 0/0 0 0 6260929.5 HCD 30 MS2 37.62011 591.7 110 73.8696 22586 22586 22577 QEplus033719.raw F4 606.3 472.8 526.3 343 959 642.8 98 2.68 1 FALSE 0.002249 0.04368 0.162 -250 112362 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TALIHDGLAR [K].tALIHDGLAR.[G] N-Term(TMT6plex) 4 A0A1W2P7A1 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=1 P63323; A0A1W2P7A1; F7AEH4; Q6ZWZ6 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=2; 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=1; 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=1; 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=1 0 3 3 0.6492 0 1 1 1 432.59286 1295.76404 1295.7633 0.57 0.00025 0/0 0 0 45631908 HCD 30 MS2 21.65129 413.1 27.318 73.8842 22591 22591 22588 QEplus033719.raw F4 401.4 344.9 470.7 296.1 414.3 551 301 3.82 1 FALSE 1.14E-05 5.61E-06 1.095 -250 112369 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KEGDLLAAQAR [K].kEGDLLAAQAR.[L] N-Term(TMT6plex); K1(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 1 3 3 0.5989 0 1 1 1 543.99506 1629.97062 1629.96883 1.1 0.0006 0/0 0 0 27604236 HCD 30 MS2 34.74661 781.7 35.385 73.8865 22592 22592 22588 QEplus033719.raw F4 830.8 701.8 805.2 667.6 873.7 811.2 425 3.69 1 FALSE 1.14E-05 1.39E-06 1.21 -250 112376 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYLPSQVSR [R].tYLPSQVSR.[V] N-Term(TMT6plex) 1 O55029 Coatomer subunit beta' OS=Mus musculus OX=10090 GN=Copb2 PE=1 SV=2 O55029 Coatomer subunit beta' OS=Mus musculus OX=10090 GN=Copb2 PE=1 SV=2 0 2 2 0.6262 0 1 1 1 640.36566 1279.72405 1279.72077 2.56 0.00164 0/0 0 0 23348286 HCD 30 MS2 8.101396 1034.8 80.592 73.8888 22593 22593 22588 QEplus033719.raw F4 1049.8 947.1 1117.1 850.5 1215.7 1028.3 397 3.05 1 FALSE 1.14E-05 5.59E-05 0.905 -250 112390 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GELANEVK [R].gELANEVk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; O89055; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Nonmuscle myosin heavy chain-A (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 2 2 0.5128 0 1 1 1 659.39453 1317.78179 1317.77784 3 0.00197 0/0 0 0 18761290 HCD 30 MS2 30.86131 1521.7 77.682 73.8933 22595 22595 22588 QEplus033719.raw F4 1527.7 1382 1692.5 1144.8 1746.5 1636.9 539 3.12 1 FALSE 1.14E-05 0.0001114 0.848 -250 112402 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPMQTGIK [R].ePMQTGIk.[A] N-Term(TMT6plex); K8(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 0 2 2 0.5633 0 1 1 1 681.39716 1361.78703 1361.78629 0.54 0.00037 0/0 0 0 12806716 HCD 30 MS2 17.2077 935.2 110 73.8983 22597 22597 22588 QEplus033719.raw F4 999.5 732.7 976.2 964.2 836.5 1101.9 529 3 1 FALSE 1.14E-05 0.0001257 0.838 -250 112407 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TALVERDDFSSGTSSR [K].tALVERDDFSSGTSSR.[S] N-Term(TMT6plex) 2 Q64521 "Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=2" Q64521; A2AQR0 "Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=2; Glycerol-3-phosphate dehydrogenase OS=Mus musculus OX=10090 GN=Gpd2 PE=1 SV=1" 1 3 3 0.7696 0 1 1 1 652.99884 1956.98197 1956.98241 -0.23 -0.00015 0/0 0 0 8849953 HCD 30 MS2 32.3779 611.6 110 73.9009 22598 22598 22588 QEplus033719.raw F4 734.2 511.3 638.2 531.6 639 615.5 221 3.82 1 FALSE 1.14E-05 2.70E-10 1.915 -250 112416 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVNVVEQEK [K].kVNVVEQEk.[I] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 3 Q5FW97 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1 Q8CF78; Q5FW97; B1ARR7 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; Alpha-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 1 3 3 0.5622 0 1 1 1 587.36841 1760.09067 1760.0885 1.24 0.00073 0/0 0 0 218216208 HCD 30 MS2 13.96211 805 7.147 73.9081 22600 22600 22599 QEplus033719.raw F4 736.5 686.5 884 718.8 952.9 851.6 338 4.66 1 FALSE 1.14E-05 1.00E-07 1.427 -250 112433 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVYFAER [K].eVYFAER.[V] N-Term(TMT6plex) 4 P63254 Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=2 P63254; Q6P3B4; A0A0G2JEK2; Q8C2N7 Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=2; Cysteine-rich protein 1 (Intestinal) OS=Mus musculus OX=10090 GN=Crip1 PE=2 SV=1; Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Crip1 PE=2 SV=1 0 2 2 0.3172 0 1 1 1 571.80646 1142.60564 1142.60434 1.14 0.00065 0/0 0 0 144909872 HCD 30 MS2 7.448991 726.6 9.283 73.9129 22602 22602 22599 QEplus033719.raw F4 738.5 703.7 886 617 719.7 694.7 136 2.68 1 FALSE 0.001284 0.01748 0.305 -250 112454 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASREEILAQAK [R].aSREEILAQAk.[E] N-Term(TMT6plex); K11(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q7TQJ6; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 4 4 0.5137 0 1 1 1 419.2547 1673.99697 1673.99504 1.15 0.00048 0/0 0 0 20635064 HCD 30 MS2 36.96868 725.8 77.007 73.9196 22605 22605 22599 QEplus033719.raw F4 770 598.4 813.6 562.2 773.1 837.3 407 3.66 1 FALSE 1.14E-05 8.79E-05 0.868 -250 112467 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAYEAELGDAR [K].aAYEAELGDAR.[K] N-Term(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 D3YUF7; P48678; P48678-2 Prelamin-A/C (Fragment) OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=1; Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 0 2 2 0.745 0 1 1 1 697.86017 1394.71306 1394.71132 1.24 0.00087 0/0 0 0 13772937 HCD 30 MS2 19.39926 639.4 110 73.9244 22607 22607 22599 QEplus033719.raw F4 699.2 565.9 692.4 527.4 718.2 633.3 185 3.49 1 FALSE 1.14E-05 5.38E-09 1.668 -250 112472 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVYFAEK [K].rVYFAEk.[V] N-Term(TMT6plex); K7(TMT6plex) 2 Q9DCT8 Cysteine-rich protein 2 OS=Mus musculus OX=10090 GN=Crip2 PE=1 SV=1 A0A0G2JF37; Q9DCT8 Cysteine-rich protein 2 OS=Mus musculus OX=10090 GN=Crip2 PE=1 SV=1; Cysteine-rich protein 2 OS=Mus musculus OX=10090 GN=Crip2 PE=1 SV=1 1 2 2 0.3789 0 1 1 1 685.91418 1370.82109 1370.81964 1.06 0.00073 0/0 0 0 12358058 HCD 30 MS2 26.48712 789.9 110 73.9269 22608 22608 22599 QEplus033719.raw F4 818.1 641.6 894.3 801.3 728.6 855.3 282 2.27 1 FALSE 0.007839 0.129 -0.058 -250 112486 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPIEINPR [R].gPIEINPR.[D] N-Term(TMT6plex) 5 P47199 Quinone oxidoreductase OS=Mus musculus OX=10090 GN=Cryz PE=1 SV=1 P47199; A0A0A6YXR4; Q3UYY0; Q80XR3; A0A0A6YVS7 "Quinone oxidoreductase OS=Mus musculus OX=10090 GN=Cryz PE=1 SV=1; Quinone oxidoreductase (Fragment) OS=Mus musculus OX=10090 GN=Cryz PE=1 SV=5; PKS_ER domain-containing protein OS=Mus musculus OX=10090 GN=Cryz PE=2 SV=1; Crystallin, zeta OS=Mus musculus OX=10090 GN=Cryz PE=2 SV=1; Quinone oxidoreductase (Fragment) OS=Mus musculus OX=10090 GN=Cryz PE=1 SV=5" 0 2 2 0.4464 0 1 1 1 562.8371 1124.66692 1124.66252 3.91 0.0022 0/0 0 0 9961384 HCD 30 MS2 63.59711 1328.1 110 73.9392 22612 22612 22610 QEplus033719.raw F4 1504.2 1058 1370.9 1140.6 1441.3 1453.5 191 2.24 1 FALSE 0.003058 0.05976 0.115 -250 112492 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVYFAEK [K].rVYFAEk.[V] N-Term(TMT6plex); K7(TMT6plex) 2 Q9DCT8 Cysteine-rich protein 2 OS=Mus musculus OX=10090 GN=Crip2 PE=1 SV=1 A0A0G2JF37; Q9DCT8 Cysteine-rich protein 2 OS=Mus musculus OX=10090 GN=Crip2 PE=1 SV=1; Cysteine-rich protein 2 OS=Mus musculus OX=10090 GN=Crip2 PE=1 SV=1 1 3 3 0.5249 0 1 1 1 457.61188 1370.82108 1370.81964 1.05 0.00048 0/0 0 0 241294992 HCD 30 MS2 17.49626 722.4 5.439 73.9415 22613 22613 22610 QEplus033719.raw F4 988.2 587.4 804.5 654.1 648.2 652.2 282 3.41 1 FALSE 5.44E-05 0.002009 0.598 -250 112499 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LMSNLR [K].lMSNLR.[T] N-Term(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 0 2 2 0.2732 0 1 1 1 481.78635 962.56542 962.56545 -0.04 -0.00002 0/0 0 0 217633616 HCD 30 MS2 32.92785 782.2 4.637 73.9438 22614 22614 22610 QEplus033719.raw F4 704 294.4 761.5 1236 306.2 1391.2 181 1.94 1 FALSE 0.005612 0.09443 0.022 -250 112535 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASREEILAQAK [R].aSREEILAQAk.[E] N-Term(TMT6plex); K11(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q7TQJ6; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 2 2 0.6944 0 1 1 1 837.50201 1673.99675 1673.99504 1.02 0.00086 0/0 0 0 10395661 HCD 30 MS2 0 487.3 110 73.9559 22619 22619 22610 QEplus033719.raw F4 470 525.1 615.5 310.9 538.2 464.3 397 3.24 1 FALSE 1.14E-05 1.83E-07 1.377 -250 112546 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIVEHVAAK [R].sIVEHVAAk.[L] N-Term(TMT6plex); K9(TMT6plex) 1 Q99LS3 Phosphoserine phosphatase OS=Mus musculus OX=10090 GN=Psph PE=1 SV=1 Q99LS3 Phosphoserine phosphatase OS=Mus musculus OX=10090 GN=Psph PE=1 SV=1 0 3 3 0.4426 0 1 1 1 471.29367 1411.86646 1411.86732 -0.61 -0.00029 0/0 0 0 15912759 HCD 30 MS2 49.38678 1128 104.648 73.9654 22622 22622 22621 QEplus033719.raw F4 1240.6 949.9 1134.3 970.4 1402.1 1070.8 230 2.96 1 FALSE 1.14E-05 0.0001813 0.808 -250 112552 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEETLDEGPPK [K].sEETLDEGPPk.[Y] N-Term(TMT6plex); K11(TMT6plex) 1 Q62446 Peptidyl-prolyl cis-trans isomerase FKBP3 OS=Mus musculus OX=10090 GN=Fkbp3 PE=1 SV=2 Q62446 Peptidyl-prolyl cis-trans isomerase FKBP3 OS=Mus musculus OX=10090 GN=Fkbp3 PE=1 SV=2 0 2 2 0.6619 0 1 1 1 830.44598 1659.88469 1659.88415 0.32 0.00027 0/0 0 0 14128187 HCD 30 MS2 19.0043 533.1 110 73.9679 22623 22623 22621 QEplus033719.raw F4 540.2 381.4 558.2 569.7 508.5 640.8 309 3.52 1 FALSE 1.14E-05 1.07E-09 1.802 -250 112561 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAMLAK [R].dAMLAk.[V] N-Term(TMT6plex); K6(TMT6plex) 4 Q9R0Y5 Adenylate kinase isoenzyme 1 OS=Mus musculus OX=10090 GN=Ak1 PE=1 SV=1 A0A0A6YXW8; Q9R0Y5-2; Q9R0Y5; Z4YN97 Nucleoside-diphosphate kinase (Fragment) OS=Mus musculus OX=10090 GN=Ak1 PE=1 SV=1; Isoform 2 of Adenylate kinase isoenzyme 1 OS=Mus musculus OX=10090 GN=Ak1; Adenylate kinase isoenzyme 1 OS=Mus musculus OX=10090 GN=Ak1 PE=1 SV=1; Nucleoside-diphosphate kinase (Fragment) OS=Mus musculus OX=10090 GN=Ak1 PE=1 SV=1 0 2 2 0.2469 0 1 1 1 553.83606 1106.66484 1106.66439 0.41 0.00023 0/0 0 0 103805424 HCD 30 MS2 22.79996 1096.7 10.579 73.9702 22624 22624 22621 QEplus033719.raw F4 1291.9 592 981.7 1434.2 878.1 1402.2 154 2.39 1 FALSE 0.005855 0.09766 0.013 -250 112569 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IIAPPERK [KR].iIAPPERk.[Y] N-Term(TMT6plex); K8(TMT6plex) 32 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q8BFZ3; Q3TG92; P63268; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61275; Q3UAF6; Q3U122; E9Q1F2; Q3UAA9; B2RRX1; Q61272; Q3U5R4; Q3UAF7; Q99NC5; Q3TIJ9; P62737; P68134; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P68033; P63260; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 1 3 3 0.5064 0 1 1 1 461.30243 1381.89273 1381.89314 -0.29 -0.00014 0/0 0 0 58602084 HCD 30 MS2 33.46582 1078.9 24.394 73.9725 22625 22625 22621 QEplus033719.raw F4 1247.9 940.6 1178 889.5 1208.6 1008.9 66 3.12 4 FALSE 0.002225 0.04286 0.165 -250 112588 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TALIHDGLAR [K].tALIHDGLAR.[G] N-Term(TMT6plex) 4 A0A1W2P7A1 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=1 P63323; A0A1W2P7A1; F7AEH4; Q6ZWZ6 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=2; 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=1; 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=1; 40S ribosomal protein S12 OS=Mus musculus OX=10090 GN=Rps12 PE=1 SV=1 0 2 2 0.6877 0 1 1 1 648.38574 1295.76421 1295.7633 0.7 0.00045 0/0 0 0 37407076 HCD 30 MS2 3.455995 835.2 62.529 73.977 22627 22627 22621 QEplus033719.raw F4 849.6 690.6 929 685.8 925.4 930.6 298 3.65 1 FALSE 1.14E-05 8.14E-06 1.064 -250 112595 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRVDLER [K].lRVDLER.[N] N-Term(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 3 3 0.55 0 1 1 1 377.23471 1129.68958 1129.68907 0.45 0.00017 0/0 0 0 15736598 HCD 30 MS2 20.37364 470.4 59.44 73.9792 22628 22628 22621 QEplus033719.raw F4 348.1 130 490.4 671.6 139.9 1042.7 208 2.8 1 FALSE 0.001787 0.0308 0.213 -250 112609 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTYSSPEDGIR [R].vTYSSPEDGIR.[E] N-Term(TMT6plex) 10 P11276; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 A0A087WS56; P11276; Q3UHL6; Q3UHR1; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; Q9Z1Z8; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.5881 0 1 1 1 726.88074 1452.7542 1452.75319 0.69 0.0005 0/0 0 0 12169002 HCD 30 MS2 9.207348 562.3 110 73.9842 22630 22630 22621 QEplus033719.raw F4 530 533 645.8 714 400.1 550.9 201 3.52 2 FALSE 1.14E-05 1.07E-08 1.612 -250 112617 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPMQTGIK [R].ePMQTGIk.[A] N-Term(TMT6plex); K8(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 0 3 3 0.614 0 1 1 1 454.60089 1361.78812 1361.78629 1.34 0.00061 0/0 0 0 10084109 HCD 30 MS2 34.60291 875.3 106.014 73.9867 22631 22631 22621 QEplus033719.raw F4 937.7 646.7 957.3 798.1 800.9 1111 503 3.29 1 FALSE 4.43E-05 0.001596 0.62 -250 112640 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPGLVTK [K].kPGLVTk.[N] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 2 Q8K009 Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=2 D3Z6B9; Q8K009 Formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=1; Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=2 0 3 3 0.375 0 1 1 1 477.32867 1429.97147 1429.97095 0.37 0.00017 0/0 0 0 25828748 HCD 30 MS2 30.1309 1213.7 60.538 74.0007 22636 22636 22632 QEplus033719.raw F4 1435.6 922.8 1273.5 1174.1 1176 1300.5 119 2.96 1 FALSE 0.003464 0.06716 0.095 -250 112659 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYEVSLR [K].tYEVSLR.[E] N-Term(TMT6plex) 3 Q3U1J4 DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=2 Q91YC8; A0A494BAF6; Q3U1J4 DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=2 SV=1; DNA damage-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=1; DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=2 0 2 2 0.4649 0 1 1 1 548.81421 1096.62114 1096.61999 1.05 0.00058 0/0 0 0 19575490 HCD 30 MS2 20.81501 960.3 55.411 74.0053 22638 22638 22632 QEplus033719.raw F4 987.9 824.2 1104.8 756.9 1042.7 1045.4 117 2.28 1 FALSE 0.001473 0.0215 0.269 -250 112670 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALHHGIDLEK [R].aLHHGIDLEk.[I] N-Term(TMT6plex); K10(TMT6plex) 5 Q922B2 "Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars1 PE=1 SV=2" Q922B2; Q3TMC5; Q3TF87; Q3UJQ3; Q8BK18 "Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars1 PE=1 SV=2; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1" 0 4 4 0.4741 0 1 1 1 398.48972 1590.93703 1590.9368 0.15 0.00006 0/0 0 0 15579982 HCD 30 MS2 35.17554 714.4 70.434 74.0098 22640 22640 22632 QEplus033719.raw F4 779.6 597.1 856.7 597.7 621.6 834 476 2.7 1 FALSE 3.35E-05 0.001214 0.645 -250 112687 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LADHFGGK [R].lADHFGGk.[L] N-Term(TMT6plex); K8(TMT6plex) 14 Q3TV90; Q3UZ17 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Luc7l PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1 E9Q715; Q3TV90; Q05CX5; Q9CYI4; Q7TNC4-2; D3Z765; Q9CYI4-2; Q3U5L2; Q7TNC4-3; Q3UZ17; Q7TNC4; Q3UGK2; A0A0R4J047; Q05D11 Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Luc7l PE=2 SV=1; Luc7l2 protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=1 SV=1; Putative RNA-binding protein Luc7-like 1 OS=Mus musculus OX=10090 GN=Luc7l PE=1 SV=2; Isoform 2 of Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2; Putative RNA-binding protein Luc7-like 1 (Fragment) OS=Mus musculus OX=10090 GN=Luc7l PE=1 SV=1; Isoform 2 of Putative RNA-binding protein Luc7-like 1 OS=Mus musculus OX=10090 GN=Luc7l; Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1; Isoform 3 of Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1; Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1; Putative RNA-binding protein Luc7-like 1 OS=Mus musculus OX=10090 GN=Luc7l PE=1 SV=1; Luc7l protein (Fragment) OS=Mus musculus OX=10090 GN=Luc7l PE=2 SV=1 0 3 3 0.6238 0 1 1 1 434.92453 1302.75904 1302.75704 1.53 0.00066 0/0 0 0 6357147 HCD 30 MS2 75.91709 1171.7 94.173 74.0146 22642 22642 22632 QEplus033719.raw F4 1252.9 1072.8 1307.8 948.8 1290.9 1157.1 342 3.11 2 FALSE 0.0002119 0.004485 0.514 -250 112692 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AACYLK [R].aAcYLk.[ED] N-Term(TMT6plex); C3(Carbamidomethyl); K6(TMT6plex) 5 Q9CYG7 Mitochondrial import receptor subunit TOM34 OS=Mus musculus OX=10090 GN=Tomm34 PE=1 SV=1 Q80ZX8; Q9CYG7; Q80ZX8-2; Q9CYG7-2; Q80ZX8-3 Sperm-associated antigen 1 OS=Mus musculus OX=10090 GN=Spag1 PE=1 SV=1; Mitochondrial import receptor subunit TOM34 OS=Mus musculus OX=10090 GN=Tomm34 PE=1 SV=1; Isoform 2 of Sperm-associated antigen 1 OS=Mus musculus OX=10090 GN=Spag1; Isoform 2 of Mitochondrial import receptor subunit TOM34 OS=Mus musculus OX=10090 GN=Tomm34; Isoform 3 of Sperm-associated antigen 1 OS=Mus musculus OX=10090 GN=Spag1 0 2 2 0.4329 0 1 1 1 592.349 1183.69072 1183.69094 -0.18 -0.00011 0/0 0 0 3528668.5 HCD 30 MS2 49.73319 1211.1 110 74.0219 22644 22644 22643 QEplus033719.raw F4 1071.5 1007.9 1281.6 1065.9 1386.3 1453.2 199 2.31 1 FALSE 0.002998 0.05839 0.118 -250 112702 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSPGADGPAGSPGTPGPQGIAGQR [K].gSPGADGPAGSPGTPGPQGIAGQR.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087; Q99LL6 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4; Col1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1 0 3 3 0.7737 0 1 1 1 773.39685 2318.176 2318.16865 3.17 0.00245 0/0 0 0 4728846.5 HCD 30 MS2 0 99.1 110 74.0244 22645 22645 22643 QEplus033719.raw F4 94.3 90.9 120.1 69.1 114.9 105.3 299 7.16 1 FALSE 1.14E-05 6.31E-16 3.298 -250 112728 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSATLSVK [K].tSATLSVk.[A] N-Term(TMT6plex); K8(TMT6plex) 5 A0A1W2P6H1 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2 A0A1W2P6H1; H7BX05; A2AAJ9; E9QQ96; Z4YJE4 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Obscurin OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=2; Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Obscn PE=1 SV=3 0 2 2 0.5263 0 1 1 1 632.89813 1264.78899 1264.78767 1.04 0.00066 0/0 0 0 11106307 HCD 30 MS2 34.90962 1447.8 110 74.0314 22648 22648 22643 QEplus033719.raw F4 1589.6 691 1373.6 1784.1 1235.8 2012.8 257 2.66 1 FALSE 1.14E-05 0.0005032 0.722 -250 112732 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEGGILINSQGER [R].gEGGILINSQGER.[F] N-Term(TMT6plex) 1 Q8K2B3 "Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Mus musculus OX=10090 GN=Sdha PE=1 SV=1" Q8K2B3 "Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Mus musculus OX=10090 GN=Sdha PE=1 SV=1" 0 2 2 0.665 0 1 1 1 779.9231 1558.83891 1558.83865 0.17 0.00013 0/0 0 0 8815210 HCD 30 MS2 30.67056 459.1 110 74.034 22649 22649 22643 QEplus033719.raw F4 468.7 369.5 528.2 463.6 407.8 516.6 312 4.09 1 FALSE 1.14E-05 2.70E-12 2.295 -250 112748 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVYFAER [K].eVYFAER.[V] N-Term(TMT6plex) 4 P63254 Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=2 P63254; Q6P3B4; A0A0G2JEK2; Q8C2N7 Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=2; Cysteine-rich protein 1 (Intestinal) OS=Mus musculus OX=10090 GN=Crip1 PE=2 SV=1; Cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Crip1 PE=1 SV=1; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Crip1 PE=2 SV=1 0 2 2 0.3424 0 1 1 1 571.80621 1142.60515 1142.60434 0.71 0.0004 0/0 0 0 379069920 HCD 30 MS2 48.6591 972.7 13.061 74.0387 22651 22651 22643 QEplus033719.raw F4 961.5 810.5 1064.7 790 1141.5 1067.8 141 1.84 1 FALSE 0.007275 0.1163 -0.034 -250 112753 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDRTDAISEEK [K].iDRTDAISEEk.[L] N-Term(TMT6plex); K11(TMT6plex) 3 Q99JZ4 GTP-binding protein SAR1a OS=Mus musculus OX=10090 GN=Sar1a PE=1 SV=1 Q3TXJ4; Q99JZ4; P36536 Uncharacterized protein OS=Mus musculus OX=10090 GN=Sar1a PE=2 SV=1; GTP-binding protein SAR1a OS=Mus musculus OX=10090 GN=Sar1a PE=1 SV=1; GTP-binding protein SAR1a OS=Mus musculus OX=10090 GN=Sar1a PE=1 SV=1 1 3 3 0.6658 0 1 1 1 578.99243 1734.96274 1734.9638 -0.61 -0.00035 0/0 0 0 14421602 HCD 30 MS2 23.08667 953.8 110 74.0412 22652 22652 22643 QEplus033719.raw F4 1030 760.7 991.4 781.5 1125.4 1033.5 472 3.77 1 FALSE 1.14E-05 3.64E-08 1.511 -250 112761 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALVDGCATKK [R].aLVDGcATkk.[G] N-Term(TMT6plex); C6(Carbamidomethyl); K9(TMT6plex); K10(TMT6plex) 4 B1AWB9; O88207-2 "Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1;Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1" A3KGE7; B1AWB9; O88207-2; A0A5F8MQ70 "Collagen alpha-1(V) chain (Fragment) OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1; Collagen, type V, alpha 1 OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1; Isoform 2 of Collagen alpha-1(V) chain OS=Mus musculus OX=10090 GN=Col5a1; Collagen alpha-1(V) chain (Fragment) OS=Mus musculus OX=10090 GN=Col5a1 PE=1 SV=1" 1 3 3 0.4813 0 1 1 1 584.02252 1750.05301 1750.05 1.72 0.001 0/0 0 0 6691451 HCD 30 MS2 20.01977 1110.7 96.557 74.0435 22653 22653 22643 QEplus033719.raw F4 1058.1 910.3 1200.4 837.8 1421 1236.4 401 2.14 2 FALSE 1.14E-05 2.65E-05 0.967 -250 112773 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GELANEVK [R].gELANEVk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; O89055; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Nonmuscle myosin heavy chain-A (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 3 3 0.3103 0 1 1 1 439.93063 1317.77735 1317.77784 -0.37 -0.00016 0/0 0 0 3581825.75 HCD 30 MS2 82.22556 861.5 110 74.0533 22656 22656 22654 QEplus033719.raw F4 902 696.5 951.9 667 877.7 1073.9 520 2.61 1 FALSE 0.00116 0.01554 0.326 -250 112788 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERELELQK [K].eRELELQk.[E] N-Term(TMT6plex); K8(TMT6plex) 12 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; Q3TYI8; B2RXX6; Q6PA04; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5; Q58ES7 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spna2 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein (Fragment) OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1" 1 3 3 0.3185 0 1 1 1 501.63641 1502.89469 1502.89426 0.28 0.00014 0/0 0 0 37294464 HCD 30 MS2 21.75803 1233.4 44.215 74.0601 22659 22659 22654 QEplus033719.raw F4 1251.2 1015.7 1489 1034.2 1176.2 1434.2 470 3.36 2 FALSE 4.43E-05 0.00159 0.62 -250 112794 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLADIAR [R].sLADIAR.[E] N-Term(TMT6plex) 4 Q9DCD8 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1 Q3TEL1; Q9DCD8; O70435; E0CX62 Uncharacterized protein OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma3 PE=2 SV=1; Proteasome subunit alpha type-3 OS=Mus musculus OX=10090 GN=Psma3 PE=1 SV=3; Proteasome subunit alpha type-3 OS=Mus musculus OX=10090 GN=Psma3 PE=1 SV=2 0 2 2 0.3186 0 1 1 1 487.79565 974.58403 974.58321 0.84 0.00041 0/0 0 0 34151128 HCD 30 MS2 31.53642 966.7 31.463 74.0624 22660 22660 22654 QEplus033719.raw F4 1047.5 786.7 1080.8 829.6 1013.2 1042.3 263 2.26 1 FALSE 0.0003211 0.006167 0.475 -250 112809 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLTSSQK [K].lLTSSQk.[H] N-Term(TMT6plex); K7(TMT6plex) 5 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.2143 0 1 1 1 617.89227 1234.77727 1234.77711 0.13 0.00008 0/0 0 0 12970689 HCD 30 MS2 36.40695 1732.9 110 74.0694 22663 22663 22654 QEplus033719.raw F4 1860.4 618.1 1478.9 2818.8 813.4 2807.8 200 2.38 2 FALSE 0.0006216 0.009223 0.417 -250 112829 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAGQVAAANK [R].iAGQVAAANk.[K] N-Term(TMT6plex); K10(TMT6plex) 2 Q5M9P3 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1 Q5M9P3; Q9CZX8 40S ribosomal protein S19 (Fragment) OS=Mus musculus OX=10090 GN=Rps19 PE=2 SV=1; 40S ribosomal protein S19 OS=Mus musculus OX=10090 GN=Rps19 PE=1 SV=3 0 2 2 0.5995 0 1 1 1 700.935 1400.86272 1400.86257 0.11 0.00007 0/0 0 0 16167233 HCD 30 MS2 6.027138 712 110 74.0792 22666 22666 22665 QEplus033719.raw F4 693.7 604.6 802.6 574.6 775.6 821.1 356 3.92 1 FALSE 1.14E-05 8.08E-09 1.635 -250 112838 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALHHGIDLEK [R].aLHHGIDLEk.[I] N-Term(TMT6plex); K10(TMT6plex) 5 Q922B2 "Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars1 PE=1 SV=2" Q922B2; Q3TMC5; Q3TF87; Q3UJQ3; Q8BK18 "Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars1 PE=1 SV=2; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1" 0 3 3 0.5611 0 1 1 1 530.98364 1590.93637 1590.9368 -0.27 -0.00014 0/0 0 0 16506473 HCD 30 MS2 64.24468 1374.7 64.517 74.0814 22667 22667 22665 QEplus033719.raw F4 1507.2 1106.3 1376.3 1207.6 1708 1342.5 475 2.62 1 FALSE 1.14E-05 0.0003816 0.745 -250 112846 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YRPGTVALREIR [R].yRPGTVALREIR.[R] N-Term(TMT6plex) 10 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; E0CZ27; E0CYR7; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; H3.3 histone A (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 1 4 4 0.5469 0 1 1 1 415.75174 1659.98513 1659.98559 -0.28 -0.00012 0/0 0 0 22004146 HCD 30 MS2 44.69555 595 38.237 74.0837 22668 22668 22665 QEplus033719.raw F4 783.5 471.3 659 508 583.6 564.5 404 4.37 2 FALSE 9.73E-05 0.002989 0.559 -250 112855 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IIAPPERK [KR].iIAPPERk.[Y] N-Term(TMT6plex); K8(TMT6plex) 32 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q8BFZ3; Q3TG92; P63268; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61275; Q3UAF6; Q3U122; E9Q1F2; Q3UAA9; B2RRX1; Q61272; Q3U5R4; Q3UAF7; Q99NC5; Q3TIJ9; P62737; P68134; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P68033; P63260; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 1 2 2 0.5 0 1 1 1 691.44977 1381.89226 1381.89314 -0.64 -0.00044 0/0 0 0 17068330 HCD 30 MS2 33.36413 680.1 86.112 74.086 22669 22669 22665 QEplus033719.raw F4 750.7 590.2 740.5 535.8 798.4 664.7 73 2.72 4 FALSE 0.00676 0.1073 -0.013 -250 112865 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRVDLER [K].lRVDLER.[N] N-Term(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 2 2 0.3942 0 1 1 1 565.34784 1129.6884 1129.68907 -0.59 -0.00034 0/0 0 0 14136583 HCD 30 MS2 11.51446 783.8 110 74.0885 22670 22670 22665 QEplus033719.raw F4 747.4 431.4 795.1 876.7 640.2 1211.9 276 2.41 1 FALSE 0.006816 0.1083 -0.015 -250 112874 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISDMCK [R].iSDMck.[EV] N-Term(TMT6plex); C5(Carbamidomethyl); K6(TMT6plex) 4 Q3UK39 DNA replication licensing factor MCM2 OS=Mus musculus OX=10090 GN=Mcm2 PE=2 SV=1 Q3UK39; P97310; A0A0N4SVY2; Q3UJN1 DNA replication licensing factor MCM2 OS=Mus musculus OX=10090 GN=Mcm2 PE=2 SV=1; DNA replication licensing factor MCM2 OS=Mus musculus OX=10090 GN=Mcm2 PE=1 SV=3; DNA replication licensing factor MCM2 (Fragment) OS=Mus musculus OX=10090 GN=Mcm2 PE=1 SV=1; DNA replication licensing factor MCM2 OS=Mus musculus OX=10090 GN=Mcm2 PE=2 SV=1 0 2 2 0.3021 0 1 1 1 606.32898 1211.65068 1211.65284 -1.78 -0.00108 0/0 0 0 8098901.5 HCD 30 MS2 45.97737 1074 110 74.0935 22672 22672 22665 QEplus033719.raw F4 1193.8 1056.1 973.4 671.3 1590.5 958.6 215 2.35 1 FALSE 0.004228 0.07763 0.068 -250 112909 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLVEMCR [K].dLVEMcR.[G] N-Term(TMT6plex); C6(Carbamidomethyl) 5 Q3TRJ1 Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=1 SV=1 Q3TRJ1; Q3TUV7; Q3UQJ1; Q3TKU6; Q3TJ43 Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1; Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1; Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1 0 2 2 0.4444 0 1 1 1 576.29095 1151.57463 1151.57503 -0.35 -0.0002 0/0 0 0 20755372 HCD 30 MS2 24.73998 1005.9 80.651 74.1106 22678 22678 22676 QEplus033719.raw F4 1040 846.1 1125.7 860.9 1062.9 1099.7 115 2.34 1 FALSE 0.001591 0.02476 0.246 -250 112940 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIPLESTDGER [K].gIPLESTDGER.[L] N-Term(TMT6plex) 42 Q6DI81; A0A1Y7VK55 Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfia PE=2 SV=1;Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfic PE=1 SV=1 Q6DI81; B1AUB9; Q69ZJ5; I7HIP8; P70255-4; P70255-7; Q6GSP7; Q5CZY4; B1AUC0; Q02780-7; A2ADI3; P70255-5; A2BG76; Q05B39; P70255-6; B1AUB8; Q8BN68; Q02780-5; Q02780; A0A1Y7VK55; Q3UHA6; P70257; Q3UTK6; B1AUB6; P70255; A2BG77; P70257-2; P97863-2; E9PUH7; Q02780-2; D3YZ00; Q02780-6; Q02780-3; P70257-1; Q3TYK3; Q02780-4; Q3UFE1; A2BG75; P70255-2; Q8C434; P97863; A0A1B0GX74 Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfia PE=2 SV=1; Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfia PE=1 SV=1; Nuclear factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Nfia PE=2 SV=1; Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfib PE=1 SV=1; Isoform 4 of Nuclear factor 1 C-type OS=Mus musculus OX=10090 GN=Nfic; Isoform 7 of Nuclear factor 1 C-type OS=Mus musculus OX=10090 GN=Nfic; Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfib PE=2 SV=1; Nuclear factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Nfix PE=2 SV=1; Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfia PE=1 SV=1; Isoform 7 of Nuclear factor 1 A-type OS=Mus musculus OX=10090 GN=Nfia; CCAAT-box-binding transcription factor (Fragment) OS=Mus musculus OX=10090 GN=Nfib PE=1 SV=8; Isoform 5 of Nuclear factor 1 C-type OS=Mus musculus OX=10090 GN=Nfic; Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfib PE=1 SV=1; Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfia PE=2 SV=1; Isoform 6 of Nuclear factor 1 C-type OS=Mus musculus OX=10090 GN=Nfic; Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfia PE=1 SV=1; Nuclear factor 1 OS=Mus musculus OX=10090 PE=2 SV=1; Isoform 5 of Nuclear factor 1 A-type OS=Mus musculus OX=10090 GN=Nfia; Nuclear factor 1 A-type OS=Mus musculus OX=10090 GN=Nfia PE=1 SV=1; Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfic PE=1 SV=1; Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfic PE=2 SV=1; Nuclear factor 1 X-type OS=Mus musculus OX=10090 GN=Nfix PE=1 SV=2; Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfia PE=2 SV=1; Nuclear factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Nfia PE=1 SV=1; Nuclear factor 1 C-type OS=Mus musculus OX=10090 GN=Nfic PE=1 SV=1; Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfib PE=1 SV=1; Isoform NFIX2 of Nuclear factor 1 X-type OS=Mus musculus OX=10090 GN=Nfix; Isoform 2 of Nuclear factor 1 B-type OS=Mus musculus OX=10090 GN=Nfib; Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfix PE=1 SV=1; Isoform 1 of Nuclear factor 1 A-type OS=Mus musculus OX=10090 GN=Nfia; Nuclear factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Nfix PE=1 SV=1; Isoform 6 of Nuclear factor 1 A-type OS=Mus musculus OX=10090 GN=Nfia; Isoform 3 of Nuclear factor 1 A-type OS=Mus musculus OX=10090 GN=Nfia; Isoform NFIX1 of Nuclear factor 1 X-type OS=Mus musculus OX=10090 GN=Nfix; Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfix PE=1 SV=1; Isoform 4 of Nuclear factor 1 A-type OS=Mus musculus OX=10090 GN=Nfia; Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfib PE=2 SV=1; Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfib PE=1 SV=1; Isoform 2 of Nuclear factor 1 C-type OS=Mus musculus OX=10090 GN=Nfic; Nuclear factor 1 OS=Mus musculus OX=10090 GN=Nfib PE=2 SV=1; Nuclear factor 1 B-type OS=Mus musculus OX=10090 GN=Nfib PE=1 SV=2; CCAAT-box-binding transcription factor (Fragment) OS=Mus musculus OX=10090 GN=Nfib PE=4 SV=1 0 2 2 0.6308 0 1 1 1 701.87323 1402.73918 1402.73754 1.17 0.00082 0/0 0 0 9580702 HCD 30 MS2 10.426 641 110 74.1204 22682 22682 22676 QEplus033719.raw F4 626.4 635.2 706.5 462.1 770.2 645.6 238 3.44 2 FALSE 1.14E-05 1.57E-09 1.77 -250 112945 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YLYSQK [R].yLYSQk.[E] N-Term(TMT6plex); K6(TMT6plex) 4 Q91YH5 Atlastin-3 OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1 A0A494BAU1; A0A494BAX8; Q91YH5; E9PYT3 Atlastin-3 OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1; Atlastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1; Atlastin-3 OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1; Atlastin-3 OS=Mus musculus OX=10090 GN=Atl3 PE=1 SV=1 0 2 2 0.5116 0 1 1 1 630.37366 1259.74004 1259.73999 0.03 0.00002 0/0 0 0 9246119 HCD 30 MS2 19.78152 1043.5 110 74.1229 22683 22683 22676 QEplus033719.raw F4 961.8 926.7 1202.4 911.7 1248.5 1009.6 403 2.15 1 FALSE 0.00459 0.0816 0.057 -250 112955 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLVAPTDRQRR [-].sLVAPTDRQRR.[L] N-Term(Prot)(Acetyl); N-Term(TMT6plex) 1 Q8C9R7 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=4930523C07Rik PE=2 SV=1 Q8C9R7 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=4930523C07Rik PE=2 SV=1 2 4 4 0.3265 0 1 1 1 393.23004 1569.89834 1569.90225 -2.5 -0.00098 0/0 0 0 8662339 HCD 30 MS2 6.923789 338.6 110 74.1254 22684 22684 22676 QEplus033719.raw F4 303.7 293.9 374.4 311.3 333.4 415.1 NoQuanLabels 361 1.96 1 FALSE 0.008487 0.1491 -0.086 -250 112960 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTYSSPEDGIR [R].vTYSSPEDGIR.[E] N-Term(TMT6plex) 10 P11276; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 A0A087WS56; P11276; Q3UHL6; Q3UHR1; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; Q9Z1Z8; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 3 3 0.6 0 1 1 1 484.92352 1452.75602 1452.75319 1.95 0.00094 0/0 0 0 6134540.5 HCD 30 MS2 55.21401 388.8 110 74.1279 22685 22685 22676 QEplus033719.raw F4 340.8 306 429.1 363.2 434 459.8 202 3.85 2 FALSE 1.14E-05 3.84E-05 0.936 -250 112977 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGVMVAK [RK].eGVMVAk.[K] N-Term(TMT6plex); K7(TMT6plex) 10 P63325; A0A3B2W864; Q9QXS1 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3" Q499F9; A0A338P731; P63325; A0A0R4J218; Q9QXS1-2; Q3UW83; A0A338P7K4; Q3U9P0; A0A3B2W864; Q9QXS1 "Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; 40S ribosomal protein S10 (Fragment) OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; S10_plectin domain-containing protein OS=Mus musculus OX=10090 GN=Rps10 PE=2 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3" 0 2 2 0.4519 0 1 1 1 596.36316 1191.71904 1191.71715 1.59 0.00095 0/0 0 0 16325279 HCD 30 MS2 35.24021 982.8 39.001 74.1377 22688 22688 22687 QEplus033719.raw F4 1046.5 813.4 1036.5 845.9 1066.3 1088 435 2.7 3 FALSE 0.0003012 0.006066 0.477 -250 112982 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADAAWTK [R].aDAAWTk.[M] N-Term(TMT6plex); K7(TMT6plex) 1 Q6PB66 "Leucine-rich PPR motif-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Lrpprc PE=1 SV=2" Q6PB66 "Leucine-rich PPR motif-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Lrpprc PE=1 SV=2" 0 2 2 0.3934 0 1 1 1 610.85474 1220.7022 1220.70394 -1.43 -0.00087 0/0 0 0 16968716 HCD 30 MS2 8.137606 1434.4 110 74.1403 22689 22689 22687 QEplus033719.raw F4 1447.1 1154.6 1586.2 1338.8 1375.3 1704.5 365 2.72 1 FALSE 0.0005076 0.008005 0.439 -250 112990 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELAEELR [R].eLAEELR.[L] N-Term(TMT6plex) 1 A2AUC9 Kelch-like protein 41 OS=Mus musculus OX=10090 GN=Klhl41 PE=1 SV=1 A2AUC9 Kelch-like protein 41 OS=Mus musculus OX=10090 GN=Klhl41 PE=1 SV=1 0 2 2 0.1044 0 1 1 1 544.81061 1088.61394 1088.6149 -0.89 -0.00048 0/0 0 0 31158718 HCD 30 MS2 48.14353 797.3 21.981 74.1448 22691 22691 22687 QEplus033719.raw F4 861.3 453.4 807.7 1009.6 557.7 1094.3 283 2.49 1 FALSE 0.00131 0.01785 0.301 -250 112996 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FMCEVR [K].fMcEVR.[V] N-Term(TMT6plex); C3(Carbamidomethyl) 7 E9QNN1 DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1 O70133-2; Q05BR6; Q3UR42; E9QNN1; A0A0R4J2C3; A0A087WPL5; O70133 Isoform 2 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; Dhx9 protein (Fragment) OS=Mus musculus OX=10090 GN=Dhx9 PE=2 SV=1; DEAH box protein 9 (Fragment) OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=2 0 2 2 0.3983 0 1 1 1 535.77026 1070.53325 1070.53244 0.76 0.00041 0/0 0 0 27046040 HCD 30 MS2 39.83884 1015 40.164 74.147 22692 22692 22687 QEplus033719.raw F4 923.8 1006.4 1165.6 726.5 1258.6 1009 66 2.41 1 FALSE 0.004483 0.08014 0.061 -250 113004 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSITEAMHR [K].vSITEAMHR.[N] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.7609 0 1 1 1 424.90295 1272.69431 1272.69317 0.89 0.00038 0/0 0 0 22104416 HCD 30 MS2 53.92478 276.3 36.852 74.1493 22693 22693 22687 QEplus033719.raw F4 295.3 205 288.2 270.9 265.1 333.1 289 4.6 2 FALSE 1.14E-05 2.66E-08 1.536 -250 113011 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELCQQIHAECK [R].eLcQQIHAEck.[R] N-Term(TMT6plex); C3(Carbamidomethyl); C10(Carbamidomethyl); K11(TMT6plex) 2 Q810A7 ATP-dependent RNA helicase DDX42 OS=Mus musculus OX=10090 GN=Ddx42 PE=1 SV=3 Q810A7; Q810A7-2 ATP-dependent RNA helicase DDX42 OS=Mus musculus OX=10090 GN=Ddx42 PE=1 SV=3; Isoform 2 of ATP-dependent RNA helicase DDX42 OS=Mus musculus OX=10090 GN=Ddx42 0 3 3 0.7078 0 1 1 1 625.32758 1873.96817 1873.96646 0.91 0.00057 0/0 0 0 4421322 HCD 30 MS2 13.84867 593.1 110 74.1518 22694 22694 22687 QEplus033719.raw F4 609.3 554.2 646.5 419.3 765.2 564.3 323 4.62 1 FALSE 1.14E-05 1.01E-11 2.186 -250 113031 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGTDDSMTLQSQK [R].kGTDDSMTLQSQk.[F] N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex) 4 E9Q317 18 kDa Sin3-associated polypeptide OS=Mus musculus OX=10090 GN=Sap18 PE=1 SV=1 D3Z2N9; E9Q317; D3YY73; Q4FZH3 Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=1 SV=1; 18 kDa Sin3-associated polypeptide OS=Mus musculus OX=10090 GN=Sap18 PE=1 SV=1; Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=1 SV=1; Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=2 SV=1 1 3 3 0.6765 0 1 1 1 709.39575 2126.1727 2126.17303 -0.15 -0.00011 0/0 0 0 11279055 HCD 30 MS2 28.52213 338.8 110 74.1591 22697 22697 22687 QEplus033719.raw F4 338.8 340 380.9 268.4 366.2 338.2 451 5.78 1 FALSE 1.14E-05 4.61E-14 2.631 -250 113043 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APSTTIPK [K].aPSTTIPk.[E] N-Term(TMT6plex); K8(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 2 2 0.1504 0 1 1 1 636.90076 1272.79424 1272.79276 1.16 0.00074 0/0 0 0 11895371 HCD 30 MS2 36.47462 1076.2 110 74.1689 22700 22700 22698 QEplus033719.raw F4 1110.8 606.4 1161.4 1279.7 707.8 1591 386 2.46 1 FALSE 0.001074 0.01397 0.346 -250 113075 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAGLSWR [R].eAGLSWR.[E] N-Term(TMT6plex) 9 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 Q8R2V4; Q6NZJ6-2; E9Q9E1; Q6PD42; E9PVC5; E9PVC6; A0A0J9YUS5; Q6NZJ6; Q8K0J8 Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1 0 2 2 0.3568 0 1 1 1 524.29321 1047.57915 1047.57846 0.66 0.00034 0/0 0 0 22803802 HCD 30 MS2 50.70337 1129.8 27.597 74.1802 22705 22705 22698 QEplus033719.raw F4 1195 841.9 1196.5 1109.5 1164.6 1271.2 280 1.99 1 FALSE 0.00315 0.06149 0.11 -250 113126 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALTDSFR [R].aLTDSFR.[R] N-Term(TMT6plex) 2 Q6P069 Sorcin OS=Mus musculus OX=10090 GN=Sri PE=1 SV=1 Q6P069-2; Q6P069 Isoform 2 of Sorcin OS=Mus musculus OX=10090 GN=Sri; Sorcin OS=Mus musculus OX=10090 GN=Sri PE=1 SV=1 0 2 2 0.2232 0 1 1 1 519.79327 1038.57927 1038.57813 1.1 0.00057 0/0 0 0 30698320 HCD 30 MS2 30.49673 889.5 30.598 74.2044 22714 22714 22709 QEplus033719.raw F4 1253.1 678.6 753.6 699.8 1302.8 649.2 96 2.33 1 FALSE 0.0006035 0.008904 0.423 -250 113133 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHDLALR [K].iHDLALR.[A] N-Term(TMT6plex) 5 Q3TV90 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Luc7l PE=2 SV=1 Q3TV90; Q9CYI4; Q9CYI4-2; A0A0R4J047; Q05D11 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Luc7l PE=2 SV=1; Putative RNA-binding protein Luc7-like 1 OS=Mus musculus OX=10090 GN=Luc7l PE=1 SV=2; Isoform 2 of Putative RNA-binding protein Luc7-like 1 OS=Mus musculus OX=10090 GN=Luc7l; Putative RNA-binding protein Luc7-like 1 OS=Mus musculus OX=10090 GN=Luc7l PE=1 SV=1; Luc7l protein (Fragment) OS=Mus musculus OX=10090 GN=Luc7l PE=2 SV=1 0 3 3 0.2478 0 1 1 1 356.2236 1066.65625 1066.65704 -0.74 -0.00026 0/0 0 0 7251349 HCD 30 MS2 18.89631 223.4 110 74.2091 22716 22716 22709 QEplus033719.raw F4 224.9 208.7 237.6 138 322.1 209.2 75 3.35 1 FALSE 1.14E-05 0.0009008 0.671 -250 113143 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGALHK [R].lGALHk.[A] N-Term(TMT6plex); K6(TMT6plex) 4 Q3UPS8 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Pdzrn3 PE=2 SV=1 Q3UPS8; Q69ZS0-3; Q69ZS0-2; Q69ZS0 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Pdzrn3 PE=2 SV=1; Isoform 3 of E3 ubiquitin-protein ligase PDZRN3 OS=Mus musculus OX=10090 GN=Pdzrn3; Isoform 2 of E3 ubiquitin-protein ligase PDZRN3 OS=Mus musculus OX=10090 GN=Pdzrn3; E3 ubiquitin-protein ligase PDZRN3 OS=Mus musculus OX=10090 GN=Pdzrn3 PE=1 SV=3 0 3 3 0.2076 0 1 1 1 366.24564 1096.72235 1096.72429 -1.76 -0.00064 0/0 0 0 4505608.5 HCD 30 MS2 53.38038 416.5 110 74.2116 22717 22717 22709 QEplus033719.raw F4 346.1 363.5 477 350 421.3 540.9 47 2.89 1 FALSE 0.0007724 0.01074 0.392 -250 113211 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCVITISGR [K].gcVITISGR.[M] N-Term(TMT6plex); C2(Carbamidomethyl) 5 E9PYH2 Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 PE=1 SV=1 Q91V12-3; E9PYH2; Q91V12-4; Q91V12; Q91V12-2 Isoform C of Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7; Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 PE=1 SV=1; Isoform D of Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7; Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 PE=1 SV=2; Isoform A of Cytosolic acyl coenzyme A thioester hydrolase OS=Mus musculus OX=10090 GN=Acot7 0 2 2 0.5975 0 1 1 1 596.33984 1191.67241 1191.67171 0.59 0.00035 0/0 0 0 15628461 HCD 30 MS2 45.10036 947.8 44.237 74.2375 22727 22727 22720 QEplus033719.raw F4 985.4 851.2 1020 790.9 1046.3 993 431 2.41 1 FALSE 1.14E-05 1.91E-05 0.994 -250 113223 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALNELGRHK [R].aLNELGRHk.[E] N-Term(TMT6plex); K9(TMT6plex) 5 Q6ZPZ8 MKIAA1031 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA1031 PE=4 SV=1 Q6ZPZ8; Q3UGE6; F8VPP8; A0A2R8VHI0; Q3TAC6 MKIAA1031 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA1031 PE=4 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Zc3h7b PE=2 SV=1; Zinc finger CCCH type-containing 7B OS=Mus musculus OX=10090 GN=Zc3h7b PE=1 SV=1; Zinc finger CCCH type-containing 7B (Fragment) OS=Mus musculus OX=10090 GN=Zc3h7b PE=1 SV=1; TPR_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Zc3h7b PE=2 SV=1 1 3 3 0.3532 0 1 1 1 499.30774 1495.90866 1495.91092 -1.51 -0.00075 0/0 0 0 9259558 HCD 30 MS2 51.36135 917.4 110 74.2425 22729 22729 22720 QEplus033719.raw F4 1237.3 507.5 840.3 603.2 1107.4 1208.5 303 2.01 1 FALSE 0.0009259 0.01273 0.363 -250 113232 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSITEAMHR [K].vSITEAMHR.[N] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.6236 0 1 1 1 636.84967 1272.69206 1272.69317 -0.87 -0.00055 0/0 0 0 7253873.5 HCD 30 MS2 55.62117 940.9 110 74.245 22730 22730 22720 QEplus033719.raw F4 949 620.8 997.7 1078.8 799 1200.3 284 2.71 2 FALSE 1.14E-05 5.43E-05 0.908 -250 113256 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVTIMPK [K].rVTIMPk.[D] N-Term(TMT6plex); K7(TMT6plex) 8 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 1 3 3 0.4947 0 1 1 1 434.9491 1302.83274 1302.83318 -0.34 -0.00015 0/0 0 0 59183116 HCD 30 MS2 38.01667 635.8 14.965 74.2593 22735 22735 22731 QEplus033719.raw F4 649 745.9 664.1 378.9 871.1 505.6 281 2.81 2 FALSE 0.0005556 0.008334 0.433 -250 113270 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVLLGETGK [K].rVLLGETGk.[E] N-Term(TMT6plex); K9(TMT6plex) 4 Q3UC02 40S ribosomal protein S11 OS=Mus musculus OX=10090 GN=Rps11 PE=1 SV=1 Q3UC02; Q9DB79; A0A1B0GRR3; A0A1B0GSE8 40S ribosomal protein S11 OS=Mus musculus OX=10090 GN=Rps11 PE=1 SV=1; 40S ribosomal protein S11 OS=Mus musculus OX=10090 GN=Rps11 PE=2 SV=1; 40S ribosomal protein S11 OS=Mus musculus OX=10090 GN=Rps11 PE=1 SV=1; 40S ribosomal protein S11 (Fragment) OS=Mus musculus OX=10090 GN=Rps11 PE=1 SV=1 1 3 3 0.484 0 1 1 1 477.64096 1430.90833 1430.90952 -0.83 -0.0004 0/0 0 0 19529110 HCD 30 MS2 40.29076 1030.1 44.348 74.2638 22737 22737 22731 QEplus033719.raw F4 1129.1 790.2 1122.7 916.7 1149.2 1072.6 322 4.07 1 FALSE 1.14E-05 3.79E-08 1.507 -250 113279 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPGEVCGPTHFQCVSTNR [K].qPGEVcGPTHFQcVSTNR.[C] N-Term(TMT6plex); C6(Carbamidomethyl); C13(Carbamidomethyl) 4 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; Q3UHH3; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspg2 PE=2 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 3 3 0.7897 0 1 1 1 768.37061 2303.09726 2303.08585 4.96 0.0038 0/0 0 0 7557563.5 HCD 30 MS2 0 212.3 110 74.2664 22738 22738 22731 QEplus033719.raw F4 204.2 207.2 269 225.5 169.1 199 110 6.61 2 FALSE 1.14E-05 6.31E-16 3.943 -250 113329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LFPQGEAR [R].lFPQGEAR.[K] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 0 2 2 0.4947 0 1 1 1 573.82672 1146.64617 1146.64687 -0.62 -0.00035 0/0 0 0 21017436 HCD 30 MS2 38.20374 877.3 39.032 74.2859 22745 22745 22742 QEplus033719.raw F4 897.7 645.3 1027.8 755.9 859.4 1077.5 285 2.85 1 FALSE 0.0001504 0.003354 0.546 -250 113339 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVDQLTNDK [R].qVDQLTNDk.[A] N-Term(TMT6plex); K9(TMT6plex) 9 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.5528 0 1 1 1 759.93048 1518.85369 1518.85279 0.59 0.00045 0/0 0 0 7209690 HCD 30 MS2 0 648.7 110 74.2885 22746 22746 22742 QEplus033719.raw F4 762.6 709.2 666.7 416.6 772.1 565.1 470 3.6 2 FALSE 1.14E-05 1.66E-06 1.196 -250 113349 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDAYNQEK [K].lDAYNQEk.[Q] N-Term(TMT6plex); K8(TMT6plex) 7 Q4FJN9; A0A0G2JDJ5 Fdps protein OS=Mus musculus OX=10090 GN=Fdps PE=1 SV=1;Farnesyl pyrophosphate synthase (Fragment) OS=Mus musculus OX=10090 GN=Fdps PE=4 SV=1 Q3TMB3; Q3US29; A0A0G2JEB3; Q4FJN9; Q5M8R9; A0A0G2JDJ5; A0A0G2JEA5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fdps PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fdps PE=2 SV=1; Farnesyl pyrophosphate synthase (Fragment) OS=Mus musculus OX=10090 GN=Fdps PE=4 SV=4; Fdps protein OS=Mus musculus OX=10090 GN=Fdps PE=1 SV=1; Farnesyl diphosphate synthetase OS=Mus musculus OX=10090 GN=Fdps PE=2 SV=1; Farnesyl pyrophosphate synthase (Fragment) OS=Mus musculus OX=10090 GN=Fdps PE=4 SV=1; Predicted gene 43738 OS=Mus musculus OX=10090 GN=Gm43738 PE=4 SV=1 0 2 2 0.5594 0 1 1 1 719.90161 1438.79595 1438.79422 1.2 0.00087 0/0 0 0 23452376 HCD 30 MS2 13.07143 924.8 110 74.291 22747 22747 22742 QEplus033719.raw F4 1008.2 906.5 1005.7 750.4 936.1 941.6 373 3.2 2 FALSE 1.14E-05 0.0002295 0.788 -250 113366 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVTIMPK [K].rVTIMPk.[D] N-Term(TMT6plex); K7(TMT6plex) 8 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 1 2 2 0.4976 0 1 1 1 651.92139 1302.8355 1302.83318 1.78 0.00116 0/0 0 0 7139669 HCD 30 MS2 0 768.1 110 74.2983 22750 22750 22742 QEplus033719.raw F4 747.5 926.5 840.9 493.5 976 623.9 258 2.11 2 FALSE 0.001343 0.01897 0.29 -250 113374 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NPADLPK [K].nPADLPk.[L] N-Term(TMT6plex); K7(TMT6plex) 17 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q3TSK4; Q8C153; P58252; O89070; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3TPG2; Q3UZ14; Q3TK17; Q3TLB1; Q3TWX1; Q3TX47 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Elongation factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 0 2 2 0.3827 0 1 1 1 606.87097 1212.73467 1212.73524 -0.48 -0.00029 0/0 0 0 7115932.5 HCD 30 MS2 62.44054 1136.3 110 74.3008 22751 22751 22742 QEplus033719.raw F4 1080.7 1051.8 1158.4 803.1 1632 1091.7 217 1.96 1 FALSE 0.001658 0.02744 0.23 -250 113385 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSPGADGPAGSPGTPGPQGIAGQR [K].gSPGADGPAGSPGTPGPQGIAGQR.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087; Q99LL6 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4; Col1a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a1 PE=2 SV=1 0 2 2 0.8126 0 1 1 1 1159.59155 2318.17583 2318.16865 3.1 0.00359 0/0 0 0 3313438.75 HCD 30 MS2 0 76.6 110 74.3106 22754 22754 22753 QEplus033719.raw F4 71.6 87.3 100.9 29.8 98.8 71.4 299 5.87 1 FALSE 1.14E-05 6.31E-16 4.745 -250 113405 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQQLTAMK [R].qQQLTAMk.[V] N-Term(TMT6plex); K8(TMT6plex) 9 Q69ZX3; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; A0A2R8VHF9; A0A338P6K2; A2VCK0; O08638-2; O08638; Q8VDD5; A0A2R8VKI5; E9QPE7 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-9 (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2 0 2 2 0.5549 0 1 1 1 703.41663 1405.82598 1405.82374 1.59 0.00112 0/0 0 0 10208338 HCD 30 MS2 22.70776 901.7 110 74.318 22757 22757 22753 QEplus033719.raw F4 919.4 967.6 1029.3 732.3 938.6 822.7 457 3.46 2 FALSE 1.14E-05 5.59E-05 0.905 -250 113438 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WGASTAATQK [R].wGASTAATQk.[K] N-Term(TMT6plex); K10(TMT6plex) 12 Q80TU6 MKIAA0670 protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1 Q7TSL7; Q9JIX8; B8JJ90; B8JJ91; B8JJ92; Q9JIX8-2; Q9JIX8-4; Q9JIX8-3; F6RJ39; Q52KR6; Q05D19; Q80TU6 Apoptotic chromatin condensation inducer 1 OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1; Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=3; Apoptotic chromatin condensation inducer in the nucleus (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=8; Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Isoform 2 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Isoform 4 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Isoform 3 of Apoptotic chromatin condensation inducer in the nucleus OS=Mus musculus OX=10090 GN=Acin1; Apoptotic chromatin condensation inducer in the nucleus (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Acin1 protein OS=Mus musculus OX=10090 GN=Acin1 PE=1 SV=1; Acin1 protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1; MKIAA0670 protein (Fragment) OS=Mus musculus OX=10090 GN=Acin1 PE=2 SV=1 0 2 2 0.6044 0 1 1 1 739.92102 1478.83476 1478.83675 -1.34 -0.00099 0/0 0 0 4492622 HCD 30 MS2 71.60941 349.7 110 74.3278 22761 22761 22753 QEplus033719.raw F4 391.1 287.3 350.9 359.7 337.2 372 475 3.21 1 FALSE 1.14E-05 1.65E-06 1.196 -250 113484 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALEFAPACHR [R].aLEFAPAcHR.[F] N-Term(TMT6plex); C8(Carbamidomethyl) 9 Q3UL32 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnajc7 PE=2 SV=1 Q3UL32; A0A6I8MWZ9; A0A6I8MX00; A2A5E1; A0A6I8MWZ1; A0A6I8MWX8; Q9QYI3; A0A6I8MWY7; F7BTP8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnajc7 PE=2 SV=1; DnaJ homolog subfamily C member 7 (Fragment) OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=2; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=2; DnaJ homolog subfamily C member 7 OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=1; DnaJ homolog subfamily C member 7 (Fragment) OS=Mus musculus OX=10090 GN=Dnajc7 PE=1 SV=2 0 3 3 0.7006 0 1 1 1 467.5816 1400.73026 1400.73062 -0.26 -0.00012 0/0 0 0 11625747 HCD 30 MS2 42.29202 1039.4 110 74.3497 22769 22769 22764 QEplus033719.raw F4 1021.9 747.4 1107.5 1001.6 1214 1143.9 177 3.14 1 FALSE 1.14E-05 1.22E-05 1.031 -250 113494 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLVALYTR [K].hLVALYTR.[D] N-Term(TMT6plex) 2 P35569 Insulin receptor substrate 1 OS=Mus musculus OX=10090 GN=Irs1 PE=1 SV=1 P35569; Q543V3 Insulin receptor substrate 1 OS=Mus musculus OX=10090 GN=Irs1 PE=1 SV=1; Insulin receptor substrate 1 OS=Mus musculus OX=10090 GN=Irs1 PE=1 SV=1 0 3 3 0.4515 0 1 1 1 401.24704 1201.72657 1201.72546 0.92 0.00037 0/0 0 0 3027328.75 HCD 30 MS2 57.88203 345.1 110 74.3547 22771 22771 22764 QEplus033719.raw F4 292.7 317.1 404.5 274.4 410.6 371.3 319 2.68 1 FALSE 0.0002218 0.004536 0.513 -250 113513 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTELCETPATSDTK [K].nTELcETPATSDTk.[S] N-Term(TMT6plex); C5(Carbamidomethyl); K14(TMT6plex) 6 A0A0R4J078 UBX domain-containing protein 4 OS=Mus musculus OX=10090 GN=Ubxn4 PE=1 SV=1 A0A087WSK5; Q9CRQ1; A0A0R4J078; Q8C0Z0; Q9CT42; Q3ULE5 UBX domain-containing protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Ubxn4 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ubxn4 PE=2 SV=1; UBX domain-containing protein 4 OS=Mus musculus OX=10090 GN=Ubxn4 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ubxn4 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ubxn4 PE=2 SV=1; UBX domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ubxn4 PE=2 SV=1 0 3 3 0.7472 0 1 1 1 675.6792 2025.02304 2025.02106 0.98 0.00066 0/0 0 0 6539446 HCD 30 MS2 31.39127 260.5 110 74.3595 22773 22773 22764 QEplus033719.raw F4 242.7 203.7 285.8 241.6 274.4 314.7 255 4.51 1 FALSE 1.14E-05 1.99E-07 1.371 -250 113545 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LHVAMK [R].lHVAMk.[K] N-Term(TMT6plex); K6(TMT6plex) 3 Q3TW96 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus OX=10090 GN=Uap1l1 PE=1 SV=1 Q3TW96; Q3TW96-2; Q8BVK3 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus OX=10090 GN=Uap1l1 PE=1 SV=1; Isoform 2 of UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Mus musculus OX=10090 GN=Uap1l1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Uap1l1 PE=2 SV=1 0 3 3 0.4767 0 1 1 1 386.24747 1156.72785 1156.72766 0.17 0.00006 0/0 0 0 12605701 HCD 30 MS2 9.038619 507.6 70.511 74.3785 22780 22780 22775 QEplus033719.raw F4 433.4 415.6 688.2 494.1 358.7 655.6 174 2.58 1 FALSE 0.003742 0.07114 0.085 -250 113554 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVSAVVVGADR [R].gVSAVVVGADR.[V] N-Term(TMT6plex) 1 Q9CQT1 Methylthioribose-1-phosphate isomerase OS=Mus musculus OX=10090 GN=Mri1 PE=1 SV=1 Q9CQT1 Methylthioribose-1-phosphate isomerase OS=Mus musculus OX=10090 GN=Mri1 PE=1 SV=1 0 2 2 0.5799 0 1 1 1 629.86938 1258.73149 1258.73167 -0.14 -0.00009 0/0 0 0 3239484.25 HCD 30 MS2 0 536.6 110 74.3811 22781 22781 22775 QEplus033719.raw F4 511.8 443.4 580.3 483 588.6 612.5 354 3.19 1 FALSE 1.14E-05 3.44E-07 1.325 -250 113559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELEDMNQK [K].eLEDMNQk.[L] N-Term(TMT6plex); K8(TMT6plex) 4 P13412 "Troponin I, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnni2 PE=2 SV=2" A2A6K0; A0A1B0GRY8; P13412; A2A6J8 "Troponin I, fast skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni2 PE=1 SV=1; Troponin I, fast skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni2 PE=1 SV=1; Troponin I, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnni2 PE=2 SV=2; Troponin I, fast skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni2 PE=1 SV=1" 0 2 2 0.5387 0 1 1 1 732.89215 1464.77703 1464.77685 0.12 0.00009 0/0 0 0 39263412 HCD 30 MS2 30.64386 1114.9 54.457 74.3833 22782 22782 22775 QEplus033719.raw F4 1264.5 374.8 1121.4 1710.5 423.4 1795 328 2.84 1 FALSE 3.35E-05 0.001394 0.632 -250 113578 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIIHGSDSVESAEK [R].nIIHGSDSVESAEk.[E] N-Term(TMT6plex); K14(TMT6plex) 3 E9PZF0 Nucleoside diphosphate kinase OS=Mus musculus OX=10090 GN=Gm20390 PE=3 SV=1 Q01768; E9PZF0; B0LAA8 Nucleoside diphosphate kinase B OS=Mus musculus OX=10090 GN=Nme2 PE=1 SV=1; Nucleoside diphosphate kinase OS=Mus musculus OX=10090 GN=Gm20390 PE=3 SV=1; Nucleoside diphosphate kinase (Fragment) OS=Mus musculus OX=10090 GN=Nme2 PE=2 SV=1 0 3 3 0.7347 0 1 1 1 648.68744 1944.04776 1944.04384 2.02 0.00131 0/0 0 0 7136213 HCD 30 MS2 43.56764 465.9 110 74.3906 22785 22785 22775 QEplus033719.raw F4 448.7 319.8 381.9 552.7 570.3 522.3 369 5.39 1 FALSE 1.14E-05 3.70E-13 2.459 -250 113594 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVDQLTNDK [R].qVDQLTNDk.[A] N-Term(TMT6plex); K9(TMT6plex) 9 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 3 3 0.5 0 1 1 1 506.95618 1518.85398 1518.85279 0.78 0.00039 0/0 0 0 50854644 HCD 30 MS2 14.59433 814 31.831 74.4027 22789 22789 22786 QEplus033719.raw F4 883.4 758 848.2 671.9 901 821.2 471 3.46 2 FALSE 5.44E-05 0.002588 0.573 -250 113611 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YKEETIEK [K].ykEETIEk.[M] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 3 Q4FZH2 Ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1 B1ARA5; Q3U7N1; Q4FZH2 60S ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1; KOW domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1 1 3 3 0.3434 0 1 1 1 576.34473 1727.01963 1727.01941 0.12 0.00007 0/0 0 0 9361308 HCD 30 MS2 36.09504 1181.2 110 74.4075 22791 22791 22786 QEplus033719.raw F4 1302.8 1129.5 1274.2 958.1 1236.7 1186 333 1.66 1 FALSE 5.44E-05 0.002426 0.58 -250 113645 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPMQTGIK [R].ePMQTGIk.[A] N-Term(TMT6plex); K8(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 0 2 2 0.55 0 1 1 1 681.39703 1361.78679 1361.78629 0.37 0.00025 0/0 0 0 109705488 HCD 30 MS2 6.450105 741.5 16.731 74.4271 22798 22798 22797 QEplus033719.raw F4 695.8 518.2 782.1 917.4 554.3 981.2 529 3.4 1 FALSE 1.14E-05 0.000194 0.802 -250 113662 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGGGGGGPGGEQETQELASK [R].gGGGGGGGPGGEQETQELASk.[R] N-Term(TMT6plex); K21(TMT6plex) 1 O35295 Transcriptional activator protein Pur-beta OS=Mus musculus OX=10090 GN=Purb PE=1 SV=3 O35295 Transcriptional activator protein Pur-beta OS=Mus musculus OX=10090 GN=Purb PE=1 SV=3 0 3 3 0.8184 0 1 1 1 763.38995 2288.15531 2288.15189 1.49 0.00114 0/0 0 0 9443318 HCD 30 MS2 70.6049 294.4 110 74.4367 22802 22802 22797 QEplus033719.raw F4 308.8 234.4 363.5 261.7 269.1 329 269 5.23 1 FALSE 1.14E-05 6.31E-16 3.274 -250 113668 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGEVRGHIR [R].lGEVRGHIR.[V] N-Term(TMT6plex) 1 Q6PGG6 Guanine nucleotide-binding protein-like 3-like protein OS=Mus musculus OX=10090 GN=Gnl3l PE=1 SV=1 Q6PGG6 Guanine nucleotide-binding protein-like 3-like protein OS=Mus musculus OX=10090 GN=Gnl3l PE=1 SV=1 1 3 3 0.3609 0 1 1 1 422.59277 1265.76377 1265.76397 -0.16 -0.00007 0/0 0 0 8274714 HCD 30 MS2 67.54844 745 94.602 74.439 22803 22803 22797 QEplus033719.raw F4 789.6 562.9 801.2 534.6 757.4 1024.2 311 2.3 1 FALSE 0.005756 0.09655 0.016 -250 113677 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDFTEEEEAQVR [K].nDFTEEEEAQVR.[K] N-Term(TMT6plex) 2 Q9WTX5 S-phase kinase-associated protein 1 OS=Mus musculus OX=10090 GN=Skp1 PE=1 SV=3 Q3TL58; Q9WTX5 S-phase kinase-associated protein 1 OS=Mus musculus OX=10090 GN=Skp1 PE=2 SV=1; S-phase kinase-associated protein 1 OS=Mus musculus OX=10090 GN=Skp1 PE=1 SV=3 0 2 2 0.8333 0 1 1 1 848.40637 1695.80547 1695.80232 1.85 0.00157 0/0 0 0 4915781.5 HCD 30 MS2 0 199.9 110 74.4415 22804 22804 22797 QEplus033719.raw F4 200.7 166.1 228.3 168.6 200.5 235 91 4.56 1 FALSE 1.14E-05 2.13E-10 1.935 -250 113681 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTAPGPEPAKPGDLR [K].tTAPGPEPAkPGDLR.[E] N-Term(TMT6plex); K10(TMT6plex) 4 G3X8T2 Zinc finger CCCH domain-containing protein 18 OS=Mus musculus OX=10090 GN=Zc3h18 PE=1 SV=1 H3BJJ9; G3X8T2; H3BIW0; Q0P678 Zinc finger CCCH domain-containing protein 18 (Fragment) OS=Mus musculus OX=10090 GN=Zc3h18 PE=1 SV=1; Zinc finger CCCH domain-containing protein 18 OS=Mus musculus OX=10090 GN=Zc3h18 PE=1 SV=1; Zinc finger CCCH domain-containing protein 18 OS=Mus musculus OX=10090 GN=Zc3h18 PE=1 SV=1; Zinc finger CCCH domain-containing protein 18 OS=Mus musculus OX=10090 GN=Zc3h18 PE=1 SV=1 0 3 3 0.6944 0 1 1 1 655.71033 1965.11643 1965.11695 -0.26 -0.00017 0/0 0 0 4299239 HCD 30 MS2 40.24152 328.1 110 74.444 22805 22805 22797 QEplus033719.raw F4 319.2 305.5 353 275.3 355.8 360 417 4.68 1 FALSE 1.14E-05 6.04E-10 1.849 -250 113704 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASREEILAQAK [R].aSREEILAQAk.[E] N-Term(TMT6plex); K11(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q811J9; Q7TQJ6; Q8VDD5; Q99JJ3 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 4 4 0.4759 0 1 1 1 419.25433 1673.9955 1673.99504 0.28 0.00012 0/0 0 0 6310332.5 HCD 30 MS2 7.49451 412.6 110 74.4589 22810 22810 22808 QEplus033719.raw F4 386.9 386.1 464.9 301 507.2 429.8 396 3.95 1 FALSE 1.14E-05 8.03E-05 0.875 -250 113718 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YMVADK [R].yMVADk.[F] N-Term(TMT6plex); K6(TMT6plex) 12 Q76MZ3 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=3 G3UWL2; Q7TMX2; H3BKU1; Q8C2E1; Q3TTF6; H3BIV7; H3BLE7; Q76MZ3; Q8BIX1; Q7TNP2; H3BLQ0; G3UWS4 "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform (Fragment) OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=1; Protein phosphatase 2 (Formerly 2A), regulatory subunit A (PR 65), alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppp2r1a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppp2r1b PE=2 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=2; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1" 0 2 2 0.4113 0 1 1 1 592.841 1184.67473 1184.67495 -0.19 -0.00011 0/0 0 0 11459080 HCD 30 MS2 23.72459 1278.9 110 74.4637 22812 22812 22808 QEplus033719.raw F4 1348.3 1118.9 1394.6 1018.4 1483.9 1309.2 205 2.31 1 FALSE 0.003708 0.07093 0.085 -250 113739 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGGGGGGPGGEQETQELASK [R].gGGGGGGGPGGEQETQELASk.[R] N-Term(TMT6plex); K21(TMT6plex) 1 O35295 Transcriptional activator protein Pur-beta OS=Mus musculus OX=10090 GN=Purb PE=1 SV=3 O35295 Transcriptional activator protein Pur-beta OS=Mus musculus OX=10090 GN=Purb PE=1 SV=3 0 3 3 0.8795 0 1 1 1 763.39117 2288.15897 2288.15189 3.1 0.00236 0/0 0 0 6688862.5 HCD 30 MS2 31.53911 400 110 74.4734 22816 22816 22808 QEplus033719.raw F4 447 289.7 480 377.7 321.4 484.3 278 6.72 1 FALSE 1.14E-05 6.31E-16 3.921 -250 113753 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVNVVEQEK [K].kVNVVEQEk.[I] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 3 Q5FW97 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1 Q8CF78; Q5FW97; B1ARR7 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; Alpha-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 1 3 3 0.5405 0 1 1 1 587.36798 1760.08939 1760.0885 0.51 0.0003 0/0 0 0 6634218 HCD 30 MS2 62.18301 844.9 110 74.4784 22818 22818 22808 QEplus033719.raw F4 946.8 610.4 758.1 949.7 897.6 906.8 339 3.83 1 FALSE 1.14E-05 2.82E-08 1.532 -250 113761 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IIAPPERK [KR].iIAPPERk.[Y] N-Term(TMT6plex); K8(TMT6plex) 32 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q8BFZ3; Q3TG92; P63268; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61275; Q3UAF6; Q3U122; E9Q1F2; Q3UAA9; B2RRX1; Q61272; Q3U5R4; Q3UAF7; Q99NC5; Q3TIJ9; P62737; P68134; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P68033; P63260; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 1 3 3 0.515 0 1 1 1 461.30313 1381.89484 1381.89314 1.23 0.00057 0/0 0 0 1760490624 HCD 30 MS2 5.711654 581 0.674 74.4857 22820 22820 22819 QEplus033719.raw F4 641.9 485.7 624.7 449.9 699.5 584 56 3.01 4 FALSE 0.0015 0.02171 0.267 -250 113778 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NADGYKLDK [K].nADGYkLDk.[Q] N-Term(TMT6plex); K6(TMT6plex); K9(TMT6plex) 2 Q8JZQ9 Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=1 SV=1 Q8JZQ9; Q8CIJ3 Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=1 SV=1; Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=2 SV=1 1 3 3 0.2099 0 1 1 1 571.00519 1711.00101 1710.99935 0.97 0.00055 0/0 0 0 20801808 HCD 30 MS2 48.36847 1578.3 93.872 74.4903 22822 22822 22819 QEplus033719.raw F4 1683.5 1293.9 1717 1451.2 1628.6 1695.9 375 1.62 1 FALSE 0.007208 0.1138 -0.029 -250 113789 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMASLK [R].aMASLk.[A] N-Term(TMT6plex); K6(TMT6plex) 4 Q9QXS1 Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q499F9; A0A0R4J218; Q9QXS1-2; Q9QXS1 Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 0 2 2 0.3264 0 1 1 1 539.8385 1078.66973 1078.66947 0.23 0.00013 0/0 0 0 9030336 HCD 30 MS2 47.62112 1529 110 74.495 22824 22824 22819 QEplus033719.raw F4 1514.1 1300.9 1665.8 1321.1 1711.2 1661.2 29 2.39 1 FALSE 0.004649 0.08218 0.056 -250 113805 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDDNEETIKK [R].vDDNEETIkk.[R] N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex) 2 Q9R0Y5 Adenylate kinase isoenzyme 1 OS=Mus musculus OX=10090 GN=Ak1 PE=1 SV=1 Q9R0Y5-2; Q9R0Y5 Isoform 2 of Adenylate kinase isoenzyme 1 OS=Mus musculus OX=10090 GN=Ak1; Adenylate kinase isoenzyme 1 OS=Mus musculus OX=10090 GN=Ak1 PE=1 SV=1 1 3 3 0.6231 0 1 1 1 626.69812 1878.07981 1878.07872 0.58 0.00036 0/0 0 0 2922397.75 HCD 30 MS2 0 696.8 110 74.5 22826 22826 22819 QEplus033719.raw F4 832.7 413.2 641.2 879.6 511.9 902.1 480 3.29 1 FALSE 1.14E-05 1.29E-05 1.027 -250 113822 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QWHNDCFNCK [R].qWHNDcFNck.[K] N-Term(TMT6plex); C6(Carbamidomethyl); C9(Carbamidomethyl); K10(TMT6plex) 1 Q543D7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fhl2 PE=1 SV=1 Q543D7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fhl2 PE=1 SV=1 0 3 3 0.7255 0 1 1 1 622.96436 1866.87851 1866.87798 0.29 0.00018 0/0 0 0 4320120 HCD 30 MS2 33.84322 439.3 110 74.5051 22828 22828 22819 QEplus033719.raw F4 438.5 402.1 516.7 345.1 480.9 452.4 80 4.99 1 FALSE 1.14E-05 1.12E-08 1.608 -250 113836 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTYSSPEDGIR [R].vTYSSPEDGIR.[E] N-Term(TMT6plex) 10 P11276; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 A0A087WS56; P11276; Q3UHL6; Q3UHR1; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; Q9Z1Z8; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 0 2 2 0.6489 0 1 1 1 726.88031 1452.75334 1452.75319 0.11 0.00008 0/0 0 0 27353076 HCD 30 MS2 0 480 67.516 74.5149 22831 22831 22830 QEplus033719.raw F4 413 408.1 567.8 680.6 294.9 515.9 196 3.93 2 FALSE 1.14E-05 1.35E-08 1.592 -250 113844 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPMQTGIK [R].ePMQTGIk.[A] N-Term(TMT6plex); K8(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 0 3 3 0.6123 0 1 1 1 454.60049 1361.78693 1361.78629 0.47 0.00021 0/0 0 0 25667726 HCD 30 MS2 13.17463 605 36.832 74.5172 22832 22832 22830 QEplus033719.raw F4 621.4 403.8 628.3 599.3 550 827.2 529 3.25 1 FALSE 4.43E-05 0.001647 0.617 -250 113849 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELEDMNQK [K].eLEDMNQk.[L] N-Term(TMT6plex); K8(TMT6plex) 4 P13412 "Troponin I, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnni2 PE=2 SV=2" A2A6K0; A0A1B0GRY8; P13412; A2A6J8 "Troponin I, fast skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni2 PE=1 SV=1; Troponin I, fast skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni2 PE=1 SV=1; Troponin I, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnni2 PE=2 SV=2; Troponin I, fast skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni2 PE=1 SV=1" 0 3 3 0.557 0 1 1 1 488.93048 1464.77689 1464.77685 0.03 0.00001 0/0 0 0 59525808 HCD 30 MS2 13.42902 783.6 31.494 74.5195 22833 22833 22830 QEplus033719.raw F4 877.1 293 763.4 1190.4 293.2 1284.5 329 2.98 1 FALSE 0.00219 0.04225 0.167 -250 113854 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGNEYVTK [KR].vGNEYVTk.[G] N-Term(TMT6plex); K8(TMT6plex) 20 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; Q5DTH2; Q3UUB1; B2RWX0; B2RQQ1; Q8BLW0; I6L963; B1AR69; B2RY26; Q5BKR0; Q6P8P3; A2AQP0; B2RXX9; Q3UQQ3; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; MKIAA4211 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myh6 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myh6 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin-7B OS=Mus musculus OX=10090 GN=Myh7b PE=3 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 3 3 0.5762 0 1 1 1 456.60327 1367.79526 1367.79349 1.3 0.00059 0/0 0 0 27599054 HCD 30 MS2 7.726604 499.3 37.802 74.5217 22834 22834 22830 QEplus033719.raw F4 610.4 123.1 360.4 997.3 151.4 753.4 374 2.69 5 FALSE 0.001074 0.01392 0.346 -250 113893 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALTSFER [K].aLTSFER.[D] N-Term(TMT6plex) 2 Q8BMS1 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1" Q8BMS1; Q3TB39 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1; 3HCDH_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hadha PE=2 SV=1" 0 2 2 0.4134 0 1 1 1 526.79987 1052.59245 1052.59378 -1.25 -0.00066 0/0 0 0 11649980 HCD 30 MS2 59.20242 1661.1 110 74.5337 22839 22839 22830 QEplus033719.raw F4 1609.7 1327.8 1797.8 1642.9 1634.3 1954.2 116 1.79 1 FALSE 0.007237 0.1152 -0.032 -250 113913 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALHHGIDLEK [R].aLHHGIDLEk.[I] N-Term(TMT6plex); K10(TMT6plex) 5 Q922B2 "Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars1 PE=1 SV=2" Q922B2; Q3TMC5; Q3TF87; Q3UJQ3; Q8BK18 "Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars1 PE=1 SV=2; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1; Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars PE=2 SV=1" 0 4 4 0.5232 0 1 1 1 398.48975 1590.93715 1590.9368 0.22 0.00009 0/0 0 0 6453269 HCD 30 MS2 35.90086 436.2 97.405 74.5432 22842 22842 22841 QEplus033719.raw F4 448.2 281.9 510.8 408.7 354.5 612.9 476 3.02 1 FALSE 1.14E-05 1.17E-05 1.034 -250 113940 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLMAFEHQR [R].gLMAFEHQR.[A] N-Term(TMT6plex) 3 A1A4T2 Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1 A1A4T2; Q3UE86; Q8BHN3 Alpha glucosidase 2 alpha neutral subunit OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Gal_mutarotas_2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ganab PE=2 SV=1; Neutral alpha-glucosidase AB OS=Mus musculus OX=10090 GN=Ganab PE=1 SV=1 0 3 3 0.7847 0 1 1 1 439.90207 1317.69165 1317.69351 -1.41 -0.00062 0/0 0 0 37301332 HCD 30 MS2 39.84806 567.1 32.117 74.5502 22845 22845 22841 QEplus033719.raw F4 885.4 310.7 424.5 607.1 780.1 394.6 228 4.18 1 FALSE 1.14E-05 5.14E-06 1.102 -250 113944 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIFFSHR [R].gIFFSHR.[D] N-Term(TMT6plex) 4 Q4FJZ4 T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1 Q4FJZ4; Q3UDG2; Q3U6U7; P32921 "T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; T1-TrpRS OS=Mus musculus OX=10090 GN=Wars PE=2 SV=1; Tryptophan--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Wars1 PE=1 SV=2" 0 3 3 0.6614 0 1 1 1 364.87665 1092.61539 1092.61518 0.19 0.00007 0/0 0 0 6278522 HCD 30 MS2 41.6596 175.1 110 74.5527 22846 22846 22841 QEplus033719.raw F4 178.9 139.4 186.3 135.6 179.7 230.8 208 2.51 1 FALSE 1.14E-05 0.0006872 0.695 -250 113958 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGGGGGGGPGGEQETQELASK [R].gGGGGGGGPGGEQETQELASk.[R] N-Term(TMT6plex); K21(TMT6plex) 1 O35295 Transcriptional activator protein Pur-beta OS=Mus musculus OX=10090 GN=Purb PE=1 SV=3 O35295 Transcriptional activator protein Pur-beta OS=Mus musculus OX=10090 GN=Purb PE=1 SV=3 0 3 3 0.8807 0 1 1 1 763.39063 2288.15732 2288.15189 2.38 0.00181 0/0 0 0 24769518 HCD 30 MS2 0 441.6 110 74.56 22849 22849 22841 QEplus033719.raw F4 480.2 285.2 546.7 421.2 343.8 572.7 269 7.04 1 FALSE 1.14E-05 6.31E-16 4.185 -250 113965 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILADQQDK [K].iLADQQDk.[Y] N-Term(TMT6plex); K8(TMT6plex) 2 Q3U1C2 RuvB-like helicase OS=Mus musculus OX=10090 GN=Ruvbl1 PE=1 SV=1 Q3U1C2; Q3UJN2 RuvB-like helicase OS=Mus musculus OX=10090 GN=Ruvbl1 PE=1 SV=1; RuvB-like helicase OS=Mus musculus OX=10090 GN=Ruvbl1 PE=2 SV=1 0 2 2 0.3574 0 1 1 1 694.91132 1388.81536 1388.81495 0.29 0.0002 0/0 0 0 9997300 HCD 30 MS2 21.30851 1105 110 74.5648 22851 22851 22841 QEplus033719.raw F4 1094.6 1023.9 1247 900.3 1224.4 1139.9 485 3.33 1 FALSE 1.14E-05 7.76E-05 0.878 -250 113979 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVVHIDSEK [K].dVVHIDSEk.[D] N-Term(TMT6plex); K9(TMT6plex) 1 Q921X9 Protein disulfide-isomerase A5 OS=Mus musculus OX=10090 GN=Pdia5 PE=1 SV=1 Q921X9 Protein disulfide-isomerase A5 OS=Mus musculus OX=10090 GN=Pdia5 PE=1 SV=1 0 3 3 0.5972 0 1 1 1 500.62085 1499.848 1499.84698 0.68 0.00034 0/0 0 0 10426081 HCD 30 MS2 0 839 76.067 74.5743 22854 22854 22852 QEplus033719.raw F4 926.1 768.5 875.2 667.8 998.9 797.4 373 3.6 1 FALSE 1.14E-05 5.69E-05 0.904 -250 113989 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DDLENVK [K].dDLENVk.[S] N-Term(TMT6plex); K7(TMT6plex) 2 P09055 Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 P09055-2; P09055 Isoform 2 of Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1; Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 0 2 2 0.4371 0 1 1 1 645.86902 1290.73076 1290.73055 0.16 0.0001 0/0 0 0 17980038 HCD 30 MS2 45.8271 1346.7 110 74.5769 22855 22855 22852 QEplus033719.raw F4 1378.5 951.8 1383.2 1254.5 1577.7 1534.8 417 3.02 1 FALSE 0.0001504 0.003433 0.544 -250 114000 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MTSGDVLSNRK [K].mTSGDVLSNRk.[M] N-Term(TMT6plex); K11(TMT6plex) 1 Q80V26 "Golgi-resident adenosine 3',5'-bisphosphate 3'-phosphatase OS=Mus musculus OX=10090 GN=Bpnt2 PE=1 SV=1" Q80V26 "Golgi-resident adenosine 3',5'-bisphosphate 3'-phosphatase OS=Mus musculus OX=10090 GN=Bpnt2 PE=1 SV=1" 1 3 3 0.6875 0 1 1 1 555.98334 1665.93546 1665.93581 -0.21 -0.00012 0/0 0 0 12848644 HCD 30 MS2 29.73698 1146.4 110 74.5816 22857 22857 22852 QEplus033719.raw F4 1046.7 988.1 1276.3 957.9 1335 1274.5 442 3.36 1 FALSE 1.14E-05 2.11E-07 1.366 -250 114006 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVLESGGETGDGDNDTTK [K].tVLESGGETGDGDNDTTk.[K] N-Term(TMT6plex); K18(TMT6plex) 3 Q3TI79 PUA domain-containing protein OS=Mus musculus OX=10090 GN=Dkc1 PE=2 SV=1 Q3TI79; Q3TM67; Q9ESX5 PUA domain-containing protein OS=Mus musculus OX=10090 GN=Dkc1 PE=2 SV=1; PUA domain-containing protein OS=Mus musculus OX=10090 GN=Dkc1 PE=2 SV=1; H/ACA ribonucleoprotein complex subunit DKC1 OS=Mus musculus OX=10090 GN=Dkc1 PE=1 SV=4 0 3 3 0.7251 0 1 1 1 752.04095 2254.10831 2254.10869 -0.17 -0.00012 0/0 0 0 5366157 HCD 30 MS2 0 205.6 110 74.5841 22858 22858 22852 QEplus033719.raw F4 193.3 204.7 235.1 158.3 235.2 206.8 193 5.93 1 FALSE 1.14E-05 2.18E-12 2.313 -250 114014 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MTGTSELK [K].mTGTSELk.[V] N-Term(TMT6plex); K8(TMT6plex) 2 A0A0G2JFH2 Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 A0A0G2JFH2; Q60638 Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=2 SV=1 0 2 2 0.29 0 1 1 1 662.88055 1324.75383 1324.75466 -0.62 -0.00041 0/0 0 0 4916749.5 HCD 30 MS2 0 592.6 110 74.5867 22859 22859 22852 QEplus033719.raw F4 637.1 240 623.5 830.5 306.7 918.1 389 3.31 1 FALSE 1.14E-05 0.0001123 0.847 -250 114063 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQLAVLR [K].nQLAVLR.[V] N-Term(TMT6plex) 2 Q9CQ10 Charged multivesicular body protein 3 OS=Mus musculus OX=10090 GN=Chmp3 PE=1 SV=3 A0A0N4SVS3; Q9CQ10 Charged multivesicular body protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Chmp3 PE=1 SV=3; Charged multivesicular body protein 3 OS=Mus musculus OX=10090 GN=Chmp3 PE=1 SV=3 0 2 2 0.2157 0 1 1 1 521.83258 1042.65788 1042.65704 0.81 0.00042 0/0 0 0 14528373 HCD 30 MS2 29.17566 1012.9 110 74.6087 22867 22867 22863 QEplus033719.raw F4 1061.9 893.9 1109.8 852.1 1086.1 1073.7 115 2.55 1 FALSE 0.0003113 0.006119 0.476 -250 114071 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENIAIVER [K].eNIAIVER.[R] N-Term(TMT6plex) 5 B2RY26 Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1 Q2TAW4; B2RQQ1; Q61930; B2RY26; B2RXX9 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1" 0 2 2 0.2973 0 1 1 1 586.84607 1172.68486 1172.68365 1.03 0.0006 0/0 0 0 6597113.5 HCD 30 MS2 35.77914 878.3 110 74.6112 22868 22868 22863 QEplus033719.raw F4 997.9 590.7 728.3 1116 811.7 1025.2 354 2.22 1 FALSE 0.002309 0.04589 0.155 -250 114084 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDPESEGASQALR [R].mDPESEGASQALR.[D] N-Term(TMT6plex) 4 Q3TVI8 Pre-B-cell leukemia transcription factor-interacting protein 1 OS=Mus musculus OX=10090 GN=Pbxip1 PE=1 SV=2 Q3TVI8; D3YUE1; D3Z2F0; D3YY15 Pre-B-cell leukemia transcription factor-interacting protein 1 OS=Mus musculus OX=10090 GN=Pbxip1 PE=1 SV=2; Pre-B-cell leukemia transcription factor-interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Pbxip1 PE=1 SV=1; Pre-B-cell leukemia transcription factor-interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Pbxip1 PE=1 SV=1; Pre-B-cell leukemia transcription factor-interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Pbxip1 PE=1 SV=1 0 2 2 0.7033 0 1 1 1 810.3985 1619.78972 1619.78965 0.04 0.00003 0/0 0 0 4978635 HCD 30 MS2 0 180 110 74.6163 22870 22870 22863 QEplus033719.raw F4 197.9 81 196.5 226 104.4 274.1 102 3.37 1 FALSE 1.14E-05 1.35E-11 2.162 -250 114098 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVLLGETGK [K].rVLLGETGk.[E] N-Term(TMT6plex); K9(TMT6plex) 4 Q3UC02 40S ribosomal protein S11 OS=Mus musculus OX=10090 GN=Rps11 PE=1 SV=1 Q3UC02; Q9DB79; A0A1B0GRR3; A0A1B0GSE8 40S ribosomal protein S11 OS=Mus musculus OX=10090 GN=Rps11 PE=1 SV=1; 40S ribosomal protein S11 OS=Mus musculus OX=10090 GN=Rps11 PE=2 SV=1; 40S ribosomal protein S11 OS=Mus musculus OX=10090 GN=Rps11 PE=1 SV=1; 40S ribosomal protein S11 (Fragment) OS=Mus musculus OX=10090 GN=Rps11 PE=1 SV=1 1 2 2 0.3368 0 1 1 1 715.95868 1430.91008 1430.90952 0.39 0.00028 0/0 0 0 4088340 HCD 30 MS2 0 377.9 110 74.6213 22872 22872 22863 QEplus033719.raw F4 383.5 405.1 434.9 289.5 379.8 374.4 312 1.93 1 FALSE 0.0005076 0.008042 0.438 -250 114111 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GMQLHGVLR [K].gMQLHGVLR.[V] N-Term(TMT6plex) 2 Q3U7R1 Extended synaptotagmin-1 OS=Mus musculus OX=10090 GN=Esyt1 PE=1 SV=2 Q3U7R1; Q3U7R1-2 Extended synaptotagmin-1 OS=Mus musculus OX=10090 GN=Esyt1 PE=1 SV=2; Isoform 2 of Extended synaptotagmin-1 OS=Mus musculus OX=10090 GN=Esyt1 0 3 3 0.3571 0 1 1 1 413.91122 1239.71912 1239.71933 -0.17 -0.00007 0/0 0 0 7610711 HCD 30 MS2 73.39735 525.6 79.893 74.6311 22875 22875 22874 QEplus033719.raw F4 492.6 441.7 643.4 384.4 513 678.6 310 3.5 1 FALSE 1.14E-05 9.81E-05 0.859 -250 114129 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAVHEALCDNIDTR [K].tAVHEALcDNIDTR.[T] N-Term(TMT6plex); C8(Carbamidomethyl) 4 Q3UXN3; Q7TNP6 Cysteinyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1;Cars protein (Fragment) OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1 Q3UXN3; Q7TNP6; Q9ER72; Q3U716 "Cysteinyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1; Cars protein (Fragment) OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1; Cysteine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Cars1 PE=1 SV=2; Cysteinyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Cars PE=2 SV=1" 0 3 3 0.7848 0 1 1 1 615.31165 1843.92038 1843.91698 1.85 0.00114 0/0 0 0 6009322.5 HCD 30 MS2 67.98407 474.2 110 74.6411 22879 22879 22874 QEplus033719.raw F4 530.6 356.8 511.8 430.6 487.7 527.6 205 5.39 2 FALSE 1.14E-05 3.86E-14 2.645 -250 114136 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYIGTHCGQPVCESGCLNGGR [K].gYIGTHcGQPVcESGcLNGGR.[C] N-Term(TMT6plex); C7(Carbamidomethyl); C12(Carbamidomethyl); C16(Carbamidomethyl) 3 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q60784 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Fibrillin-1 (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1 0 3 3 0.8167 0 1 1 1 836.71643 2508.13474 2508.13796 -1.29 -0.00107 0/0 0 0 4029283 HCD 30 MS2 0 108.9 110 74.6437 22880 22880 22874 QEplus033719.raw F4 115.8 79.3 110.7 123.3 94.5 129.6 38 6.22 1 FALSE 1.14E-05 6.31E-16 3.101 -250 114144 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILSNNPSK [K].iLSNNPSk.[G] N-Term(TMT6plex); K8(TMT6plex) 5 P51855 Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1 P51855; Q3UEE2; A2AQN7; Q8R436; Q3TWM2 Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1; Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1; Glutathione synthase (Fragment) OS=Mus musculus OX=10090 GN=Gss PE=1 SV=1; Glutathione synthase (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Glutathione synthetase OS=Mus musculus OX=10090 GN=Gss PE=2 SV=1 0 2 2 0.3922 0 1 1 1 665.90833 1330.80937 1330.80947 -0.07 -0.00005 0/0 0 0 5478968 HCD 30 MS2 0 511.3 110 74.6462 22881 22881 22874 QEplus033719.raw F4 535.8 381.6 514.7 489.2 522.2 624 552 3.06 1 FALSE 0.0002218 0.004574 0.512 -250 114154 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YKEETIEK [K].ykEETIEk.[M] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 3 Q4FZH2 Ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1 B1ARA5; Q3U7N1; Q4FZH2 60S ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1; KOW domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1 1 2 2 0.4494 0 1 1 1 864.01514 1727.023 1727.01941 2.08 0.00179 0/0 0 0 5329868 HCD 30 MS2 49.38541 495.2 110 74.6487 22882 22882 22874 QEplus033719.raw F4 481.8 485.1 578.7 397.7 540.4 487.4 324 2.47 1 FALSE 0.0001603 0.003634 0.538 -250 114169 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGVPLTTGYR [K].sGVPLTTGYR.[Y] N-Term(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-3; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 3 of Titin OS=Mus musculus OX=10090 GN=Ttn; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.505 0 1 1 1 640.36365 1279.72002 1279.72077 -0.58 -0.00037 0/0 0 0 9157044 HCD 30 MS2 0 679 110 74.661 22886 22886 22885 QEplus033719.raw F4 747.7 362.2 648.4 900.6 476.2 938.9 411 3.03 2 FALSE 1.14E-05 4.00E-06 1.123 -250 114185 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLQVLK [R].rLQVLk.[S] N-Term(TMT6plex); K6(TMT6plex) 5 Q3THP1 Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1 Q99KK7; Q3THP1; Q6NXZ0; Q3UDD5; Q8BU29 Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=1 SV=2; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1; Dipeptidyl peptidase 3 OS=Mus musculus OX=10090 GN=Dpp3 PE=2 SV=1 1 3 3 0.1612 0 1 1 1 405.61667 1214.83545 1214.8349 0.46 0.00018 0/0 0 0 12332681 HCD 30 MS2 50.22924 774 76.29 74.6658 22888 22888 22885 QEplus033719.raw F4 707 594.7 849.8 566.4 842.7 1083.4 152 2.42 1 FALSE 0.001632 0.02657 0.235 -250 114202 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSELLK [K].gSELLk.[K] N-Term(TMT6plex); K6(TMT6plex) 3 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1 0 2 2 0.1374 0 1 1 1 552.85498 1104.70268 1104.70288 -0.18 -0.0001 0/0 0 0 27896546 HCD 30 MS2 54.03991 1063.2 27.771 74.6706 22890 22890 22885 QEplus033719.raw F4 959.9 907.7 1093.4 878.1 1508.2 1032.1 199 1.31 1 FALSE 0.005488 0.09295 0.026 -250 114206 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAETANEEEVKK [K].vAETANEEEVkk.[M] N-Term(TMT6plex); K11(TMT6plex); K12(TMT6plex) 4 Q6NXX7 Abce1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1 Q6NXX7; Q3TJM9; Q3UHY8; Q3TIU8 Abce1 protein (Fragment) OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abce1 PE=2 SV=1 1 3 3 0.5819 0 1 1 1 678.72644 2034.16477 2034.1686 -1.88 -0.00128 0/0 0 0 7860763 HCD 30 MS2 67.11711 731.2 110 74.6731 22891 22891 22885 QEplus033719.raw F4 736.4 737.9 792.9 548.2 860.6 711.2 473 3.54 1 FALSE 1.14E-05 8.85E-11 2.007 -250 114214 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNYENALK [K].sNYENALk.[E] N-Term(TMT6plex); K8(TMT6plex) 5 Q99L96 Tetraspanin OS=Mus musculus OX=10090 GN=Tspan6 PE=1 SV=1 Q99L96; H3BL26; H3BJJ0; Q3TV84; O70401 Tetraspanin OS=Mus musculus OX=10090 GN=Tspan6 PE=1 SV=1; Tetraspanin-6 (Fragment) OS=Mus musculus OX=10090 GN=Tspan6 PE=1 SV=8; Tetraspanin-6 (Fragment) OS=Mus musculus OX=10090 GN=Tspan6 PE=1 SV=8; Tetraspanin OS=Mus musculus OX=10090 GN=Tspan6 PE=2 SV=1; Tetraspanin-6 OS=Mus musculus OX=10090 GN=Tspan6 PE=1 SV=1 0 2 2 0.4694 0 1 1 1 698.8941 1396.78093 1396.78365 -1.95 -0.00136 0/0 0 0 7618468 HCD 30 MS2 45.98691 732.9 110 74.6756 22892 22892 22885 QEplus033719.raw F4 705.7 553.7 857.3 632 678.3 970.2 342 2.94 1 FALSE 1.14E-05 0.0001978 0.8 -250 114253 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IIAPPERK [KR].iIAPPERk.[Y] N-Term(TMT6plex); K8(TMT6plex) 32 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q8BFZ3; Q3TG92; P63268; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61275; Q3UAF6; Q3U122; E9Q1F2; Q3UAA9; B2RRX1; Q61272; Q3U5R4; Q3UAF7; Q99NC5; Q3TIJ9; P62737; P68134; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P68033; P63260; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 1 2 2 0.5175 0 1 1 1 691.45007 1381.89287 1381.89314 -0.2 -0.00014 0/0 0 0 94319176 HCD 30 MS2 15.17121 506.6 21.02 74.695 22899 22899 22896 QEplus033719.raw F4 558.4 431.7 549.1 431.1 567.6 501.9 66 2.57 4 FALSE 0.009555 0.1816 -0.119 -250 114265 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KISTPVDVNNR [K].kISTPVDVNNR.[E] N-Term(TMT6plex); K1(TMT6plex) 6 Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 Q3UJP4; E9Q133; Q3U0I3; Q3TBM6; Q3U4U6; F6Q609 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; T-complex protein 1 subunit gamma (Fragment) OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=8 1 3 3 0.6726 0 1 1 1 567.67334 1701.00547 1701.00594 -0.28 -0.00016 0/0 0 0 21493130 HCD 30 MS2 22.82939 884.4 46.083 74.6995 22901 22901 22896 QEplus033719.raw F4 904 742.5 978.4 748.7 923.4 1009.2 378 3.91 1 FALSE 1.14E-05 9.20E-08 1.434 -250 114283 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAMIDETR [R].vAMIDETR.[N] N-Term(TMT6plex) 13 Q8CAQ8 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; A6H604; Q3U7N2; Q6P8Y5; Q8CAQ8; Q8CAQ8-2; Q3TVZ5; Q2YDW0; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5; A0A0U1RQ14 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 0 2 2 0.5512 0 1 1 1 582.31879 1163.6303 1163.62917 0.96 0.00056 0/0 0 0 6004073 HCD 30 MS2 12.86008 996.2 110 74.7043 22903 22903 22896 QEplus033719.raw F4 987.6 755.1 1010.8 944.9 1088 1190.6 289 2.83 1 FALSE 0.0006035 0.008878 0.423 -250 114313 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YVLCTAPR [R].yVLcTAPR.[A] N-Term(TMT6plex); C4(Carbamidomethyl) 3 Q3UI57 DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=1 SV=1 Q3UI57; Q3ULD6; Q3UZH2 DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm3 PE=2 SV=1 0 2 2 0.4396 0 1 1 1 604.83685 1208.66643 1208.66589 0.44 0.00027 0/0 0 0 4493554.5 HCD 30 MS2 37.44576 1133 110 74.7191 22908 22908 22907 QEplus033719.raw F4 1140 1193.9 1175.5 742.2 1500.7 1045.4 290 2.07 1 FALSE 0.001584 0.0241 0.25 -250 114329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSSEMNTSTVNSAR [R].lSSEMNTSTVNSAR.[E] N-Term(TMT6plex) 2 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 P14733; Q8C553 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3; IF rod domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Lmnb1 PE=2 SV=1 0 2 2 0.7963 0 1 1 1 863.43463 1725.86199 1725.86388 -1.1 -0.00095 0/0 0 0 10300121 HCD 30 MS2 29.80229 523.9 110 74.7264 22911 22911 22907 QEplus033719.raw F4 501.8 536.9 606.3 393.9 607.1 497.4 161 4.81 1 FALSE 1.14E-05 1.65E-13 2.526 -250 114407 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MREFCIR [K].mREFcIR.[L] N-Term(TMT6plex); C5(Carbamidomethyl) 3 Q8R016 Bleomycin hydrolase OS=Mus musculus OX=10090 GN=Blmh PE=1 SV=1 E9PY26; Q8R016; E9QA53 Bleomycin hydrolase (Fragment) OS=Mus musculus OX=10090 GN=Blmh PE=1 SV=1; Bleomycin hydrolase OS=Mus musculus OX=10090 GN=Blmh PE=1 SV=1; Bleomycin hydrolase (Fragment) OS=Mus musculus OX=10090 GN=Blmh PE=1 SV=8 1 3 3 0.3498 0 1 1 1 414.22165 1240.65039 1240.6492 0.96 0.0004 0/0 0 0 9469708 HCD 30 MS2 52.56379 357.6 51.435 74.758 22923 22923 22918 QEplus033719.raw F4 302.2 324.1 436.7 297.5 318.2 467.1 188 2.23 1 FALSE 0.002688 0.05338 0.132 -250 114446 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVTIMPK [K].rVTIMPk.[D] N-Term(TMT6plex); K7(TMT6plex) 8 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 1 3 3 0.4846 0 1 1 1 434.95007 1302.83567 1302.83318 1.91 0.00083 0/0 0 0 2928342016 HCD 30 MS2 4.760464 418.8 0.4 74.7776 22930 22930 22929 QEplus033719.raw F4 365.7 486.7 460.6 242.3 630 327.2 258 3.57 2 FALSE 0.0008991 0.01236 0.368 -250 114453 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVLLGETGK [K].rVLLGETGk.[E] N-Term(TMT6plex); K9(TMT6plex) 4 Q3UC02 40S ribosomal protein S11 OS=Mus musculus OX=10090 GN=Rps11 PE=1 SV=1 Q3UC02; Q9DB79; A0A1B0GRR3; A0A1B0GSE8 40S ribosomal protein S11 OS=Mus musculus OX=10090 GN=Rps11 PE=1 SV=1; 40S ribosomal protein S11 OS=Mus musculus OX=10090 GN=Rps11 PE=2 SV=1; 40S ribosomal protein S11 OS=Mus musculus OX=10090 GN=Rps11 PE=1 SV=1; 40S ribosomal protein S11 (Fragment) OS=Mus musculus OX=10090 GN=Rps11 PE=1 SV=1 1 3 3 0.4731 0 1 1 1 477.64145 1430.90979 1430.90952 0.19 0.00009 0/0 0 0 39562056 HCD 30 MS2 20.24211 770.4 30.478 74.7798 22931 22931 22929 QEplus033719.raw F4 803.9 594.3 881.2 638.8 861.5 842.5 321 4.65 1 FALSE 1.14E-05 3.27E-08 1.519 -250 114468 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAGSIASAQKPPAGK [K].aAGSIASAQkPPAGk.[V] N-Term(TMT6plex); K10(TMT6plex); K15(TMT6plex) 4 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; A0A140T8T5 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 0 3 3 0.7321 0 1 1 1 681.08417 2041.23795 2041.23729 0.33 0.00022 0/0 0 0 14415806 HCD 30 MS2 45.17933 780.6 90.506 74.7871 22934 22934 22929 QEplus033719.raw F4 793.6 713.8 832 600.7 997.9 745.8 269 3.92 2 FALSE 1.14E-05 4.90E-13 2.436 -250 114474 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KSDIPEKPK [K].kSDIPEkPk.[T] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex); K9(TMT6plex) 7 Q9DBH1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubtf PE=2 SV=1 Q9DBH1; Q05DS1; A2AWT7; P25976; A2AWT6; P25976-2; A2AWT5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ubtf PE=2 SV=1; Ubtf protein (Fragment) OS=Mus musculus OX=10090 GN=Ubtf PE=2 SV=1; Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf PE=1 SV=1; Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf PE=1 SV=1; Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf PE=1 SV=1; Isoform UBF2 of Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf; Nucleolar transcription factor 1 OS=Mus musculus OX=10090 GN=Ubtf PE=1 SV=1 1 4 4 0.4426 0 1 1 1 490.31702 1958.24624 1958.24561 0.32 0.00016 0/0 0 0 13902709 HCD 30 MS2 22.20469 1296.8 108.417 74.7896 22935 22935 22929 QEplus033719.raw F4 1408.2 1216.7 1351.5 1036.8 1506.5 1261.2 160 2.35 1 FALSE 5.44E-05 0.002665 0.57 -250 114482 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAPAAQPPAAAAPSAVGSPAAAPR [R].rAPAAQPPAAAAPSAVGSPAAAPR.[Q] N-Term(TMT6plex) 4 D3Z5B1 "Zinc finger, BED type-containing 5 (Fragment) OS=Mus musculus OX=10090 GN=Zbed5 PE=4 SV=8" D3Z5B1; B2RPU8; Q9D1L0; Q8CEW7 "Zinc finger, BED type-containing 5 (Fragment) OS=Mus musculus OX=10090 GN=Zbed5 PE=4 SV=8; SCAN domain containing 3 OS=Mus musculus OX=10090 GN=Zbed5 PE=1 SV=1; Coiled-coil-helix-coiled-coil-helix domain-containing protein 2 OS=Mus musculus OX=10090 GN=Chchd2 PE=2 SV=1; DUF4371 domain-containing protein OS=Mus musculus OX=10090 GN=Zbed5 PE=2 SV=1" 1 4 4 0.6442 0 1 1 1 596.33698 2382.32607 2382.32034 2.41 0.00143 0/0 0 0 8748299 HCD 30 MS2 69.07781 481 110 74.7921 22936 22936 22929 QEplus033719.raw F4 478.2 387.2 512 432.5 555.1 521 439 3.12 1 FALSE 1.14E-05 4.58E-08 1.492 -250 114509 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVDQLTNDK [R].qVDQLTNDk.[A] N-Term(TMT6plex); K9(TMT6plex) 9 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.5444 0 1 1 1 759.93011 1518.85295 1518.85279 0.11 0.00008 0/0 0 0 534355456 HCD 30 MS2 4.121986 733.1 3.76 74.8067 22941 22941 22940 QEplus033719.raw F4 741 765.9 772.3 477.1 973.8 668.7 454 3.49 2 FALSE 1.14E-05 2.39E-05 0.975 -250 114519 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVTIMPK [K].rVTIMPk.[D] N-Term(TMT6plex); K7(TMT6plex) 8 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 1 2 2 0.486 0 1 1 1 651.92047 1302.83367 1302.83318 0.37 0.00024 0/0 0 0 164595984 HCD 30 MS2 5.313204 697.4 11.561 74.8089 22942 22942 22940 QEplus033719.raw F4 622.8 832.5 759.9 403.3 1004.5 561.3 282 2.14 2 FALSE 0.002586 0.05096 0.139 -250 114544 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTREELPVNTSK [K].dTREELPVNTSk.[A] N-Term(TMT6plex); K12(TMT6plex) 4 Q80WJ7 Protein LYRIC OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1 F6ZSG0; Q80WJ7; F6QFT1; F6QHD1 Protein LYRIC (Fragment) OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1; Protein LYRIC OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=1; Protein LYRIC (Fragment) OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=8; Protein LYRIC (Fragment) OS=Mus musculus OX=10090 GN=Mtdh PE=1 SV=2 1 3 3 0.8016 0 1 1 1 616.34723 1847.02713 1847.02746 -0.18 -0.00011 0/0 0 0 26596570 HCD 30 MS2 16.84899 718.2 65.699 74.8184 22946 22946 22940 QEplus033719.raw F4 694.8 543.5 837.4 678 667 888.6 453 5.09 1 FALSE 1.14E-05 1.34E-11 2.163 -250 114549 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPFTPAK [K].kPFTPAk.[Y] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 1 Q8C0C7 Phenylalanine--tRNA ligase alpha subunit OS=Mus musculus OX=10090 GN=Farsa PE=1 SV=1 Q8C0C7 Phenylalanine--tRNA ligase alpha subunit OS=Mus musculus OX=10090 GN=Farsa PE=1 SV=1 0 3 3 0.3344 0 1 1 1 492.65628 1475.95429 1475.9553 -0.68 -0.00034 0/0 0 0 5687983.5 HCD 30 MS2 21.29605 1193 110 74.8209 22947 22947 22940 QEplus033719.raw F4 1275.2 904.1 1210.8 1162.4 1280.7 1325.1 361 2.99 1 FALSE 0.000565 0.008669 0.427 -250 114559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LETQYCK [K].lETQYck.[L] N-Term(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex) 16 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 F6XCT0; Q9QXZ0-3; B1ARU4; F6SHS0; E9QA63; E9QNP1; Q3UPG9; Q5DTZ2; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; Q9QXZ0; A0A0A0MQA6; A0A571BF93; E9PVY8 Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; MKIAA1251 protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 2 2 0.5551 0 1 1 1 700.38629 1399.76531 1399.76556 -0.18 -0.00013 0/0 0 0 8429863 HCD 30 MS2 22.34743 617.3 110 74.8234 22948 22948 22940 QEplus033719.raw F4 646.4 402.8 740 590.5 522.6 801.6 295 2.45 3 FALSE 0.004055 0.07498 0.075 -250 114585 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGNEYVTK [KR].vGNEYVTk.[G] N-Term(TMT6plex); K8(TMT6plex) 20 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; Q5DTH2; Q3UUB1; B2RWX0; B2RQQ1; Q8BLW0; I6L963; B1AR69; B2RY26; Q5BKR0; Q6P8P3; A2AQP0; B2RXX9; Q3UQQ3; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; MKIAA4211 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myh6 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myh6 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin-7B OS=Mus musculus OX=10090 GN=Myh7b PE=3 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.6 0 1 1 1 684.40063 1367.79399 1367.79349 0.37 0.00025 0/0 0 0 135000768 HCD 30 MS2 9.02222 788.2 11.797 74.8357 22952 22952 22951 QEplus033719.raw F4 879.6 74.9 516.3 1902.1 72.4 1284.1 365 3.5 5 FALSE 1.14E-05 0.0003556 0.751 -250 114602 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQQLTAMK [R].qQQLTAMk.[V] N-Term(TMT6plex); K8(TMT6plex) 9 Q69ZX3; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q69ZX3; A0A2R8VHF9; A0A338P6K2; A2VCK0; O08638-2; O08638; Q8VDD5; A0A2R8VKI5; E9QPE7 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-9 (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2 0 2 2 0.5337 0 1 1 1 703.41614 1405.825 1405.82374 0.89 0.00063 0/0 0 0 25890524 HCD 30 MS2 0 721.7 61.378 74.8425 22955 22955 22951 QEplus033719.raw F4 646.9 717 852.8 613.5 790.5 709.2 468 3.71 2 FALSE 1.14E-05 8.94E-05 0.866 -250 114612 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAYGVVEK [R].gAYGVVEk.[VM] N-Term(TMT6plex); K8(TMT6plex) 12 Q3UDI2 Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Map2k3 PE=2 SV=1 Q3UDI2; Q5SWN9; Q3UU57; Q3TLX7; Q8BP44; Q3TJG7; A2AGS2; Q3TX82; O09110-2; Q543Z5; A0A0R4J1Q6; Q8C371 Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Map2k3 PE=2 SV=1; Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Map2k3 PE=2 SV=1; Protein kinase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Map2k6 PE=2 SV=1; Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Map2k3 PE=2 SV=1; Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Map2k6 PE=2 SV=1; Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Map2k3 PE=2 SV=1; Dual-specificity mitogen-activated protein kinase kinase 6 OS=Mus musculus OX=10090 GN=Map2k6 PE=1 SV=1; Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Map2k3 PE=2 SV=1; Isoform 1 of Dual specificity mitogen-activated protein kinase kinase 3 OS=Mus musculus OX=10090 GN=Map2k3; Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Map2k6 PE=1 SV=1; Dual-specificity mitogen-activated protein kinase kinase 3 OS=Mus musculus OX=10090 GN=Map2k3 PE=1 SV=1; Protein kinase domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.4441 0 1 1 1 640.88544 1280.7636 1280.76146 1.67 0.00107 0/0 0 0 6469697 HCD 30 MS2 0 945.9 110 74.845 22956 22956 22951 QEplus033719.raw F4 934 887.6 1000.7 832.6 1057 963.7 326 3.22 1 FALSE 1.14E-05 0.0001686 0.814 -250 114632 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAAEVIAQAR [K].sAAEVIAQAR.[K] N-Term(TMT6plex) 1 O08553 Dihydropyrimidinase-related protein 2 OS=Mus musculus OX=10090 GN=Dpysl2 PE=1 SV=2 O08553 Dihydropyrimidinase-related protein 2 OS=Mus musculus OX=10090 GN=Dpysl2 PE=1 SV=2 0 2 2 0.6418 0 1 1 1 622.86194 1244.7166 1244.71602 0.47 0.00029 0/0 0 0 11363411 HCD 30 MS2 11.13525 805.7 110 74.85 22958 22958 22951 QEplus033719.raw F4 808.2 805.6 840.6 513.4 1141.5 725.1 362 3.49 1 FALSE 1.14E-05 4.94E-08 1.485 -250 114646 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLEDVKPR [R].sLEDVkPR.[H] N-Term(TMT6plex); K6(TMT6plex) 5 A0A0A0MQ79 Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1 A0A0A0MQ79; S4R294; S4R2J9; Q3TLH4; Q3TLH4-5 Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=3; Isoform 5 of Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c 0 3 3 0.3678 0 1 1 1 467.95282 1401.84391 1401.84659 -1.91 -0.00089 0/0 0 0 7401022.5 HCD 30 MS2 27.25127 1010.2 110 74.855 22960 22960 22951 QEplus033719.raw F4 1169.5 771.1 1055.2 878.1 1117.9 1069.4 444 2.42 1 FALSE 0.0003496 0.006775 0.462 -250 114654 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQIQDVEGK [K].dQIQDVEGk.[Y] N-Term(TMT6plex); K9(TMT6plex) 7 A0A087WPK3 Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=1 Q8BLV4; E9Q9T1; A0A087WPK3; A0A087WNU6; Q3UZ39-2; A6H5U5; G5E8E1 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lrrfip1 PE=2 SV=2; Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=2; Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=1; Leucine-rich repeat flightless-interacting protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=1; Isoform 2 of Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1; Lrrfip1 protein OS=Mus musculus OX=10090 GN=Lrrfip1 PE=2 SV=1; Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=1 0 2 2 0.6394 0 1 1 1 745.41876 1489.83025 1489.82624 2.69 0.002 0/0 0 0 6228906.5 HCD 30 MS2 0 459.2 110 74.8575 22961 22961 22951 QEplus033719.raw F4 495.8 314.5 525.9 400.9 431.8 586.5 425 3.91 1 FALSE 1.14E-05 6.54E-07 1.272 -250 114670 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSTELGSGDK [K].vSTELGSGDk.[V] N-Term(TMT6plex); K10(TMT6plex) 1 Q8K3C3 Protein LZIC OS=Mus musculus OX=10090 GN=Lzic PE=1 SV=1 Q8K3C3 Protein LZIC OS=Mus musculus OX=10090 GN=Lzic PE=1 SV=1 0 2 2 0.5971 0 1 1 1 725.91144 1450.8156 1450.81534 0.18 0.00013 0/0 0 0 4152116.5 HCD 30 MS2 0 390.6 110 74.8674 22964 22964 22962 QEplus033719.raw F4 405.7 331.9 442.3 324.8 408.1 431 378 4.07 1 FALSE 1.14E-05 1.08E-08 1.611 -250 114680 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IYIDSNNNPER [K].iYIDSNNNPER.[F] N-Term(TMT6plex) 4 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 Q80U89; Q68FD5; Q5SXR6; Q3UPJ3 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1 0 3 3 0.6519 0 1 1 1 521.93744 1563.79776 1563.79645 0.84 0.00044 0/0 0 0 18737962 HCD 30 MS2 35.38204 822.7 94.152 74.8696 22965 22965 22962 QEplus033719.raw F4 883.9 623.3 876.6 674.5 780.3 1097.8 225 4.28 1 FALSE 1.14E-05 3.42E-06 1.136 -250 114685 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HSGDFGADAQGAMSK [R].hSGDFGADAQGAMSk.[A] N-Term(TMT6plex); K15(TMT6plex) 2 P04247 Myoglobin OS=Mus musculus OX=10090 GN=Mb PE=1 SV=3 P04247; A0A2R8W6F8 Myoglobin OS=Mus musculus OX=10090 GN=Mb PE=1 SV=3; Myoglobin OS=Mus musculus OX=10090 GN=Mb PE=1 SV=1 0 3 3 0.7846 0 1 1 1 646.32501 1936.96048 1936.95873 0.9 0.00058 0/0 0 0 8237742.5 HCD 30 MS2 10.36312 723.5 110 74.8722 22966 22966 22962 QEplus033719.raw F4 1029.2 249.1 509.6 1281.2 370.8 901.4 169 6.22 1 FALSE 1.14E-05 3.61E-15 2.841 -250 114698 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KQDAFYK [R].kQDAFYk.[E] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 4 Q9D9P1 MICOS complex subunit Mic19 OS=Mus musculus OX=10090 GN=Chchd3 PE=1 SV=1 Q9D9P1; Q91VG6; Q9CRB9; D3Z0L4 MICOS complex subunit Mic19 OS=Mus musculus OX=10090 GN=Chchd3 PE=1 SV=1; Chchd3 protein (Fragment) OS=Mus musculus OX=10090 GN=Chchd3 PE=2 SV=1; MICOS complex subunit Mic19 OS=Mus musculus OX=10090 GN=Chchd3 PE=1 SV=1; MICOS complex subunit Mic19 (Fragment) OS=Mus musculus OX=10090 GN=Chchd3 PE=1 SV=1 1 3 3 0.4625 0 1 1 1 529.65564 1586.95237 1586.95094 0.9 0.00048 0/0 0 0 6360854.5 HCD 30 MS2 11.932 984.5 110 74.8771 22968 22968 22962 QEplus033719.raw F4 1009.3 832.7 1062.5 985.4 932.9 1084.2 423 3.2 1 FALSE 0.0002218 0.004637 0.51 -250 114707 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNKDDIQK [K].vNkDDIQk.[M] N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 F2Z494; Q14B05; Q8VDD5; Q8BIE2; Q8BIM8 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=1; Myh9 protein OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 3 3 0.3094 0 1 1 1 549.67303 1647.00455 1647.00443 0.07 0.00004 0/0 0 0 10789080 HCD 30 MS2 39.33697 1558 110 74.8796 22969 22969 22962 QEplus033719.raw F4 1738.7 1713.7 1647.5 1093.5 1856.2 1298.3 382 2.78 1 FALSE 0.0003996 0.007261 0.453 -250 114714 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGEPSMSAMQR [R].vGEPSMSAMQR.[K] N-Term(TMT6plex) 1 O88990 Alpha-actinin-3 OS=Mus musculus OX=10090 GN=Actn3 PE=2 SV=1 O88990 Alpha-actinin-3 OS=Mus musculus OX=10090 GN=Actn3 PE=2 SV=1 0 2 2 0.6156 0 1 1 1 711.35797 1421.70867 1421.70784 0.58 0.00042 0/0 0 0 8475147 HCD 30 MS2 0 431 110 74.8822 22970 22970 22962 QEplus033719.raw F4 432.5 176.5 527.3 473 212.7 764.2 158 3.2 1 FALSE 1.14E-05 1.65E-09 1.766 -250 114719 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AASNMALGK [R].aASNMALGk.[F] N-Term(TMT6plex); K9(TMT6plex) 2 Q60676 Serine/threonine-protein phosphatase 5 OS=Mus musculus OX=10090 GN=Ppp5c PE=1 SV=3 Q60676; F7BX26 Serine/threonine-protein phosphatase 5 OS=Mus musculus OX=10090 GN=Ppp5c PE=1 SV=3; Serine/threonine-protein phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Ppp5c PE=1 SV=1 0 2 2 0.5569 0 1 1 1 660.89014 1320.773 1320.77098 1.53 0.00101 0/0 0 0 6815955 HCD 30 MS2 0 833.6 110 74.8847 22971 22971 22962 QEplus033719.raw F4 783.3 735.5 949.5 727.2 851.4 954.8 357 4.13 1 FALSE 1.14E-05 1.17E-06 1.224 -250 114738 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATNLTVSAVR [R].aTNLTVSAVR.[F] N-Term(TMT6plex) 3 P52825 "Carnitine O-palmitoyltransferase 2, mitochondrial OS=Mus musculus OX=10090 GN=Cpt2 PE=1 SV=2" Q3UDA8; P52825; Q3UN55 "Carn_acyltransf domain-containing protein OS=Mus musculus OX=10090 GN=Cpt2 PE=2 SV=1; Carnitine O-palmitoyltransferase 2, mitochondrial OS=Mus musculus OX=10090 GN=Cpt2 PE=1 SV=2; Carn_acyltransf domain-containing protein OS=Mus musculus OX=10090 GN=Cpt2 PE=2 SV=1" 0 2 2 0.6684 0 1 1 1 630.87854 1260.7498 1260.74732 1.97 0.00124 0/0 0 0 5850475 HCD 30 MS2 0 611.6 110 74.897 22975 22975 22973 QEplus033719.raw F4 634.2 502.5 648.3 545.3 649.1 690.1 405 3.86 1 FALSE 1.14E-05 3.32E-07 1.328 -250 114748 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FAEHVFR [K].fAEHVFR.[T] N-Term(TMT6plex) 9 P62748 Hippocalcin-like protein 1 OS=Mus musculus OX=10090 GN=Hpcal1 PE=1 SV=2 D3Z1M0; D3Z2Z8; Q91X97; E9PV73; P84075; D3YVA2; A0A1Y7VMK3; P62748; A2A7R5 Neurocalcin-delta (Fragment) OS=Mus musculus OX=10090 GN=Ncald PE=1 SV=1; Neurocalcin-delta (Fragment) OS=Mus musculus OX=10090 GN=Ncald PE=1 SV=2; Neurocalcin-delta OS=Mus musculus OX=10090 GN=Ncald PE=1 SV=4; Neuron-specific calcium-binding protein hippocalcin (Fragment) OS=Mus musculus OX=10090 GN=Hpca PE=1 SV=1; Neuron-specific calcium-binding protein hippocalcin OS=Mus musculus OX=10090 GN=Hpca PE=1 SV=2; Neurocalcin-delta (Fragment) OS=Mus musculus OX=10090 GN=Ncald PE=1 SV=2; Hippocalcin-like protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hpcal1 PE=1 SV=1; Hippocalcin-like protein 1 OS=Mus musculus OX=10090 GN=Hpcal1 PE=1 SV=2; Neuron-specific calcium-binding protein hippocalcin (Fragment) OS=Mus musculus OX=10090 GN=Hpca PE=1 SV=1 0 3 3 0.523 0 1 1 1 378.88019 1134.62601 1134.62574 0.23 0.00009 0/0 0 0 14699698 HCD 30 MS2 7.88098 463.8 82.487 74.8993 22976 22976 22973 QEplus033719.raw F4 415.6 422.1 546.9 345.5 503.9 549 204 3.48 1 FALSE 0.0006294 0.009418 0.414 -250 114756 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSKEDIER [R].lSkEDIER.[M] N-Term(TMT6plex); K3(TMT6plex) 16 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 1 3 3 0.2031 0 1 1 1 483.28912 1447.85282 1447.85206 0.52 0.00025 0/0 0 0 8191218.5 HCD 30 MS2 57.09961 1432.3 110 74.9018 22977 22977 22973 QEplus033719.raw F4 1384 1558.8 1685.2 1252.2 1313.5 1400.1 391 1.92 1 FALSE 0.002578 0.05061 0.14 -250 114769 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MRPTLFR [R].mRPTLFR.[L] N-Term(TMT6plex) 3 Q8R0H9 ADP-ribosylation factor-binding protein GGA1 OS=Mus musculus OX=10090 GN=Gga1 PE=1 SV=1 Q8R0H9; Q3TB03; A0A2R8VI72 ADP-ribosylation factor-binding protein GGA1 OS=Mus musculus OX=10090 GN=Gga1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Gga1 PE=2 SV=1; ADP-ribosylation factor-binding protein GGA1 OS=Mus musculus OX=10090 GN=Gga1 PE=1 SV=1 0 3 3 0.2905 0 1 1 1 383.89639 1149.67463 1149.6764 -1.54 -0.00059 0/0 0 0 5580414.5 HCD 30 MS2 67.7912 482.2 110 74.9068 22979 22979 22973 QEplus033719.raw F4 367.1 505 612.1 287.4 459.5 661.9 246 2.96 1 FALSE 0.002836 0.05549 0.126 -250 114782 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAGSIASAQKPPAGK [K].aAGSIASAQkPPAGk.[V] N-Term(TMT6plex); K10(TMT6plex); K15(TMT6plex) 4 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; A0A140T8T5 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 0 3 3 0.6993 0 1 1 1 681.0838 2041.23685 2041.23729 -0.21 -0.00014 0/0 0 0 13249726 HCD 30 MS2 6.895153 931 110 74.9115 22981 22981 22973 QEplus033719.raw F4 928.7 848.9 996.5 651.3 1275.3 885.4 282 4.59 2 FALSE 1.14E-05 3.01E-14 2.666 -250 114807 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVDQLTNDK [R].qVDQLTNDk.[A] N-Term(TMT6plex); K9(TMT6plex) 9 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 3 3 0.5356 0 1 1 1 506.9559 1518.85315 1518.85279 0.24 0.00012 0/0 0 0 244731344 HCD 30 MS2 5.833218 444 5.667 74.9239 22985 22985 22984 QEplus033719.raw F4 415.7 448.7 478.1 317.9 567.4 436.3 452 3.79 2 FALSE 1.14E-05 0.0009279 0.669 -250 114817 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YKEETIEK [K].ykEETIEk.[M] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 3 Q4FZH2 Ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1 B1ARA5; Q3U7N1; Q4FZH2 60S ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1; KOW domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Ribosomal protein L26 OS=Mus musculus OX=10090 GN=Rpl26 PE=1 SV=1 1 3 3 0.3838 0 1 1 1 576.34479 1727.01981 1727.01941 0.23 0.00013 0/0 0 0 201448576 HCD 30 MS2 14.01874 1012.8 8.197 74.9261 22986 22986 22984 QEplus033719.raw F4 872.4 929 1264.8 887.2 1061.3 1061.9 333 2.97 1 FALSE 0.000108 0.003049 0.556 -250 114842 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGNPAEINVERDEK [K].eGNPAEINVERDEk.[L] N-Term(TMT6plex); K14(TMT6plex) 6 Q99MR6 Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1 Q99MR6-3; Q99MR6; Q99MR6-4; A0A0G2JDF8; Q99MR6-2; A0A0G2JG65 Isoform C of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1; Isoform D of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Arsenite-resistance protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1; Isoform B of Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt; Arsenite-resistance protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1 1 3 3 0.5 0 1 1 1 686.70056 2058.08713 2058.08677 0.18 0.00012 0/0 0 0 4485651 HCD 30 MS2 24.43392 602.4 110 74.9332 22989 22989 22984 QEplus033719.raw F4 684 503.8 619.2 500.5 662.1 645.1 418 3.34 1 FALSE 1.14E-05 1.65E-08 1.576 -250 114849 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSADEDLK [R].vSADEDLk.[L] N-Term(TMT6plex); K8(TMT6plex) 2 Q6P8X1 Sorting nexin-6 OS=Mus musculus OX=10090 GN=Snx6 PE=1 SV=2 A0A1W2P701; Q6P8X1 Sorting nexin-6 OS=Mus musculus OX=10090 GN=Snx6 PE=1 SV=1; Sorting nexin-6 OS=Mus musculus OX=10090 GN=Snx6 PE=1 SV=2 0 2 2 0.0923 0 1 1 1 667.88214 1334.75701 1334.75677 0.18 0.00012 0/0 0 0 11355486 HCD 30 MS2 43.20118 921.8 110 74.9382 22991 22991 22984 QEplus033719.raw F4 918.4 908.3 1054.4 740.5 990.4 918.8 463 2.6 1 FALSE 1.14E-05 0.0001139 0.846 -250 114853 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYQGPLK [R].dYQGPLk.[E] N-Term(TMT6plex); K7(TMT6plex) 5 Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1;ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TS02; Q3TED3; Q3UEA1; Q3V117; Q91V92 ATP citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate (pro-S-)-lyase (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 0 2 2 0.428 0 1 1 1 639.87775 1278.74822 1278.74581 1.88 0.0012 0/0 0 0 10854553 HCD 30 MS2 0 1140.6 110 74.9407 22992 22992 22984 QEplus033719.raw F4 1236.8 1129.4 1285.6 875.8 1223.9 1091.8 462 2.64 2 FALSE 0.00079 0.01092 0.39 -250 114892 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHIGADGVK [K].vHIGADGVk.[M] N-Term(TMT6plex); K9(TMT6plex) 6 E9Q616; Q6UIL4 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1;AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1 A0PJF4; E9Q616; Q6UIL4; Q8CGE7; Q8VDN3; Q8BKS2 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=2 0 3 3 0.435 0 1 1 1 451.94672 1353.8256 1353.82546 0.1 0.00005 0/0 0 0 16786520 HCD 30 MS2 21.99483 707.9 56.301 74.9601 22999 22999 22995 QEplus033719.raw F4 698.4 719.9 804.9 545.4 775.3 703.5 223 4 2 FALSE 1.14E-05 5.22E-08 1.481 -250 114898 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIYIDK [K].hIYIDk.[N] N-Term(TMT6plex); K6(TMT6plex) 2 Q9WUM5 "Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Suclg1 PE=1 SV=4" Q9WUM5; A0A0N4SVU4 "Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Suclg1 PE=1 SV=4; Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Suclg1 PE=1 SV=1" 0 3 3 0.2756 0 1 1 1 416.25772 1246.75861 1246.75598 2.11 0.00088 0/0 0 0 9001602 HCD 30 MS2 69.15889 731.6 67.85 74.9623 23000 23000 22995 QEplus033719.raw F4 753.6 668.3 855.1 684.6 632.4 795.6 634 2.25 1 FALSE 0.006282 0.1021 0.001 -250 114907 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QDSGQYTFK [K].qDSGQYTFk.[V] N-Term(TMT6plex); K9(TMT6plex) 5 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.5594 0 1 1 1 766.41113 1531.81499 1531.81568 -0.45 -0.00034 0/0 0 0 3519929.75 HCD 30 MS2 32.71782 475.8 110 74.9673 23002 23002 22995 QEplus033719.raw F4 480.4 208.6 437.9 744.7 223.8 759.4 311 3.2 2 FALSE 1.14E-05 5.65E-06 1.095 -250 114914 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TKVEISK [K].tkVEISk.[K] N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex) 2 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 B9EIU1; Q8CGC7 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4 1 3 3 0.3168 0 1 1 1 497.99542 1491.97171 1491.97134 0.25 0.00012 0/0 0 0 24521438 HCD 30 MS2 41.07133 1309.3 68.087 74.9696 23003 23003 22995 QEplus033719.raw F4 1441.3 976.4 1311.5 1267 1440.2 1419.1 174 2.62 1 FALSE 0.0007816 0.01081 0.391 -250 114921 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNKDDIQK [K].vNkDDIQk.[M] N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 F2Z494; Q14B05; Q8VDD5; Q8BIE2; Q8BIM8 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=1; Myh9 protein OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 4 4 0.1088 0 1 1 1 412.50681 1647.00539 1647.00443 0.58 0.00024 0/0 0 0 9335872 HCD 30 MS2 22.00259 723.7 110 74.9721 23004 23004 22995 QEplus033719.raw F4 775.2 770.2 741.5 517.2 883.4 654.7 372 1.93 1 FALSE 0.00592 0.09848 0.011 -250 114929 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQNSWGTGEDVK [K].nQNSWGTGEDVk.[V] N-Term(TMT6plex); K12(TMT6plex) 1 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 0 3 3 0.7917 0 1 1 1 598.31189 1792.92112 1792.923 -1.05 -0.00063 0/0 0 0 8688299 HCD 30 MS2 0 643.5 110 74.9746 23005 23005 22995 QEplus033719.raw F4 658.5 681.1 706.1 436.1 783.9 595.3 262 5.28 1 FALSE 1.14E-05 1.16E-07 1.415 -250 114945 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YMVADK [R].yMVADk.[F] N-Term(TMT6plex); K6(TMT6plex) 12 Q76MZ3 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=3 G3UWL2; Q7TMX2; H3BKU1; Q8C2E1; Q3TTF6; H3BIV7; H3BLE7; Q76MZ3; Q8BIX1; Q7TNP2; H3BLQ0; G3UWS4 "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform (Fragment) OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=1; Protein phosphatase 2 (Formerly 2A), regulatory subunit A (PR 65), alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppp2r1a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppp2r1b PE=2 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=2; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus OX=10090 GN=Ppp2r1b PE=1 SV=1" 0 2 2 0.3673 0 1 1 1 592.84192 1184.67656 1184.67495 1.36 0.0008 0/0 0 0 10833814 HCD 30 MS2 25.4947 1433.7 110 74.9844 23008 23008 23006 QEplus033719.raw F4 1535.7 1115.6 1390.7 1157.4 2060.4 1342.2 212 2.26 1 FALSE 0.002845 0.05565 0.126 -250 114960 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPVEPEVAIHR [K].tPVEPEVAIHR.[I] N-Term(TMT6plex) 1 Q5BLK2 40S ribosomal protein S20 OS=Mus musculus OX=10090 GN=Rps20 PE=1 SV=1 Q5BLK2 40S ribosomal protein S20 OS=Mus musculus OX=10090 GN=Rps20 PE=1 SV=1 0 3 3 0.6358 0 1 1 1 492.95132 1476.83942 1476.83719 1.51 0.00074 0/0 0 0 20649768 HCD 30 MS2 46.44227 863.9 59.249 74.9889 23010 23010 23006 QEplus033719.raw F4 926.3 624.2 899.4 840.7 894.6 997.9 513 4.86 1 FALSE 1.14E-05 8.58E-06 1.06 -250 114966 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHAWDMR [R].iHAWDMR.[Y] N-Term(TMT6plex) 2 A0A0R4IZY0 Thimet oligopeptidase OS=Mus musculus OX=10090 GN=Thop1 PE=1 SV=1 A0A0R4IZY0; Q8C1A5 Thimet oligopeptidase OS=Mus musculus OX=10090 GN=Thop1 PE=1 SV=1; Thimet oligopeptidase OS=Mus musculus OX=10090 GN=Thop1 PE=1 SV=1 0 3 3 0.5241 0 1 1 1 386.54105 1157.60859 1157.60871 -0.11 -0.00004 0/0 0 0 19236830 HCD 30 MS2 4.774776 230 76.831 74.9911 23011 23011 23006 QEplus033719.raw F4 219.9 173.3 240.8 226.2 219.9 299.7 127 3.32 1 FALSE 1.14E-05 0.0001014 0.856 -250 114975 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQNSWGTGEDVK [K].nQNSWGTGEDVk.[V] N-Term(TMT6plex); K12(TMT6plex) 1 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 0 2 2 0.7946 0 1 1 1 896.96576 1792.92424 1792.923 0.69 0.00062 0/0 0 0 9687694 HCD 30 MS2 0 735 110 74.9937 23012 23012 23006 QEplus033719.raw F4 762.8 794.2 801.6 460 966.7 624.4 285 4.82 1 FALSE 1.14E-05 1.87E-11 2.135 -250 114980 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIVGGGMMR [R].gIVGGGMMR.[D] N-Term(TMT6plex) 5 P97379 Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2 PE=1 SV=2 P97379; P97379-2; Q3U931; Q5DU21; Q3U6B1 Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2 PE=1 SV=2; Isoform B of Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2; Uncharacterized protein OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1; MKIAA0660 protein (Fragment) OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1 0 2 2 0.5895 0 1 1 1 553.80493 1106.60259 1106.60119 1.27 0.0007 0/0 0 0 6157016 HCD 30 MS2 53.34425 1429.9 110 74.9962 23013 23013 23006 QEplus033719.raw F4 1374.4 1099.1 1407.7 1434.7 1758.9 1504.9 266 1.9 1 FALSE 0.003448 0.06658 0.097 -250 114985 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DKLTEAEDK [K].dkLTEAEDk.[I] N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex) 7 O35551 Rab GTPase-binding effector protein 1 OS=Mus musculus OX=10090 GN=Rabep1 PE=1 SV=2 O35551-5; Q3U983; O35551-6; O35551; O35551-4; J3QJV7; O35551-2 Isoform 5 of Rab GTPase-binding effector protein 1 OS=Mus musculus OX=10090 GN=Rabep1; Rab GTPase-binding effector protein 1 OS=Mus musculus OX=10090 GN=Rabep1 PE=1 SV=1; Isoform 6 of Rab GTPase-binding effector protein 1 OS=Mus musculus OX=10090 GN=Rabep1; Rab GTPase-binding effector protein 1 OS=Mus musculus OX=10090 GN=Rabep1 PE=1 SV=2; Isoform 4 of Rab GTPase-binding effector protein 1 OS=Mus musculus OX=10090 GN=Rabep1; Rab GTPase-binding effector protein 1 OS=Mus musculus OX=10090 GN=Rabep1 PE=1 SV=1; Isoform 2 of Rab GTPase-binding effector protein 1 OS=Mus musculus OX=10090 GN=Rabep1 1 3 3 0.5564 0 1 1 1 579.34058 1736.00718 1736.00449 1.55 0.00089 0/0 0 0 5560131.5 HCD 30 MS2 32.35346 698.7 110 74.9987 23014 23014 23006 QEplus033719.raw F4 709 521.4 765 691.6 672.2 833.1 437 2.75 1 FALSE 1.14E-05 6.43E-06 1.084 -250 114991 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGEGEGSMTK [K].lGEGEGSMTk.[E] N-Term(TMT6plex); K10(TMT6plex) 5 Q3TJN6; Q6P8X1 Sorting nexin OS=Mus musculus OX=10090 GN=Snx5 PE=2 SV=1;Sorting nexin-6 OS=Mus musculus OX=10090 GN=Snx6 PE=1 SV=2 Q8C5E7; Q3TJN6; Q6P8X1; Q3TXT4; Q9D8U8 Sorting nexin OS=Mus musculus OX=10090 GN=Snx5 PE=2 SV=1; Sorting nexin OS=Mus musculus OX=10090 GN=Snx5 PE=2 SV=1; Sorting nexin-6 OS=Mus musculus OX=10090 GN=Snx6 PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Snx5 PE=2 SV=1; Sorting nexin-5 OS=Mus musculus OX=10090 GN=Snx5 PE=1 SV=1 0 2 2 0.5057 0 1 1 1 733.90051 1466.79375 1466.7925 0.85 0.00062 0/0 0 0 5226664 HCD 30 MS2 0 589.6 110 75.0012 23015 23015 23006 QEplus033719.raw F4 700.6 476.7 634.5 474.9 647.3 603.7 339 3.48 2 FALSE 1.14E-05 7.35E-08 1.453 -250 115002 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IIAPPERK [KR].iIAPPERk.[Y] N-Term(TMT6plex); K8(TMT6plex) 32 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q8BFZ3; Q3TG92; P63268; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61275; Q3UAF6; Q3U122; E9Q1F2; Q3UAA9; B2RRX1; Q61272; Q3U5R4; Q3UAF7; Q99NC5; Q3TIJ9; P62737; P68134; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P68033; P63260; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 1 3 3 0.5307 0 1 1 1 461.30325 1381.89521 1381.89314 1.49 0.00069 0/0 0 0 3272015872 HCD 30 MS2 5.815836 597.9 0.352 75.011 23018 23018 23017 QEplus033719.raw F4 627.3 483.5 641.9 487.4 731.3 615.7 56 3.09 4 FALSE 0.00155 0.02342 0.255 -250 115021 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTIAEERDK [R].lTIAEERDk.[R] N-Term(TMT6plex); K9(TMT6plex) 4 P62702 "40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2" Q545F8; P62702; Q3V1Z5; Q3UXQ6 "40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1; 40S ribosomal protein S4, X isoform OS=Mus musculus OX=10090 GN=Rps4x PE=1 SV=2; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4l PE=2 SV=1; 40S ribosomal protein S4 OS=Mus musculus OX=10090 GN=Rps4x PE=2 SV=1" 1 3 3 0.5032 0 1 1 1 511.64014 1532.90586 1532.90483 0.67 0.00034 0/0 0 0 40647304 HCD 30 MS2 30.79632 1126.3 36.843 75.0155 23020 23020 23017 QEplus033719.raw F4 1160.7 1000.3 1302.3 814.6 1257.3 1222.8 435 3.1 1 FALSE 2.26E-05 0.001039 0.659 -250 115039 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNKDDIQK [K].vNkDDIQk.[M] N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 F2Z494; Q14B05; Q8VDD5; Q8BIE2; Q8BIM8 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=1; Myh9 protein OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 2 2 0.4169 0 1 1 1 824.00537 1647.00347 1647.00443 -0.59 -0.00048 0/0 0 0 7743423 HCD 30 MS2 0 486.1 110 75.0205 23022 23022 23017 QEplus033719.raw F4 539.7 538.6 518 334.1 580 406.5 366 3.19 1 FALSE 1.14E-05 0.0006751 0.696 -250 115055 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSDLDSETR [K].lSDLDSETR.[S] N-Term(TMT6plex) 1 O35685 Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1 O35685 Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1 0 2 2 0.6646 0 1 1 1 632.83337 1264.65947 1264.65823 0.98 0.00062 0/0 0 0 11808632 HCD 30 MS2 45.62436 1312.5 110 75.0275 23025 23025 23017 QEplus033719.raw F4 1368.9 1412.3 1414.7 816.8 1631 1231.3 217 3.22 1 FALSE 1.14E-05 1.15E-05 1.036 -250 115061 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGAAGGPEEEAEKPVK [R].aGAAGGPEEEAEkPVk.[T] N-Term(TMT6plex); K13(TMT6plex); K16(TMT6plex) 2 Q6P8I4 PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1 Q3TM89; Q6P8I4 PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1; PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1 0 3 3 0.7061 0 1 1 1 743.08984 2227.25498 2227.25372 0.56 0.00042 0/0 0 0 3551944 HCD 30 MS2 16.08874 352.2 110 75.03 23026 23026 23017 QEplus033719.raw F4 339.4 340.3 387.6 239.5 454.2 352.4 454 4.56 1 FALSE 1.14E-05 1.08E-15 2.94 -250 115067 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAEEATPVTALR [K].kAEEATPVTALR.[H] N-Term(TMT6plex); K1(TMT6plex) 21 Q9WV92-2 Isoform 2 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 Q9WV92; Q9WV92-7; A0A3B2WD96; Q9WV92-4; Q9WV92-5; D0VYV7; Q9WV92-3; A0A286YCY1; B6ZHD1; D0VYV6; Q9WV92-2; Q8BGK4; V6BQR3; Q9WV92-8; A0A286YD84; A7YY80; A0A286YDY4; A0A5F8MPR1; Q9WV92-6; A0A5F8MPE1; A0A3B2WBE1 Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Isoform 7 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Isoform 4 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Isoform 5 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Erythrocyte protein band 4.1-like 3 isoform C OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Isoform 3 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Band 4.1-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Erythrocyte protein band 4.1-like 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Isoform 2 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; FERM domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; 60kDa 4.1B MEF cell isoform (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=2 SV=1; Isoform 8 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Band 4.1-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; 130kDa Protein 4.1B MEF cell isoform OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Band 4.1-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Isoform 6 of Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3; Band 4.1-like protein 3 OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1; Band 4.1-like protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l3 PE=1 SV=1 1 3 3 0.6644 0 1 1 1 582.01697 1744.03635 1744.0369 -0.32 -0.00018 0/0 0 0 8740639 HCD 30 MS2 41.97532 994.4 110 75.0325 23027 23027 23017 QEplus033719.raw F4 952.6 901.6 1036.9 790.9 1260.6 1023.8 391 4.44 1 FALSE 1.14E-05 4.02E-08 1.503 -250 115095 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELEEISER [R].eLEEISER.[L] N-Term(TMT6plex) 12 Q5SX40; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; Q5SX39; G3UW82; B2RWX0; B2RQQ1; I6L963; B1AR69; B2RY26; B2RXX9; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.3254 0 1 1 1 617.32977 1233.65227 1233.65241 -0.12 -0.00007 0/0 0 0 54366156 HCD 30 MS2 5.782724 870.2 31.101 75.0469 23032 23032 23028 QEplus033719.raw F4 949.3 280.5 730.2 1599.4 341.2 1320.3 232 2.95 4 FALSE 1.14E-05 0.000556 0.713 -250 115096 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELEELSER [R].eLEELSER.[L] N-Term(TMT6plex) 2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541; A2AQP0 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-7B OS=Mus musculus OX=10090 GN=Myh7b PE=3 SV=1 0 2 2 0.3254 0 1 2 2 617.32977 1233.65227 1233.65241 -0.12 -0.00007 0/0 0 0 54366156 HCD 30 MS2 5.782724 870.2 31.101 75.0469 23032 23032 23028 QEplus033719.raw F4 949.3 280.5 730.2 1599.4 341.2 1320.3 232 2.95 2 FALSE 1.14E-05 0.000556 0.713 -250 115102 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQASIEK [K].mQASIEk.[GAF] N-Term(TMT6plex); K7(TMT6plex) 7 Q5SQB7 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1 Q5SQB7; Q5SQB0; Q5BL09; Q5U438; Q9DAY9; Q5SQB5; Q3U536 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Npm1 protein OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1 0 2 2 0.347 0 1 1 1 632.87018 1264.73308 1264.73353 -0.36 -0.00022 0/0 0 0 16152071 HCD 30 MS2 43.8409 875.4 41.789 75.0492 23033 23033 23028 QEplus033719.raw F4 898.3 970.8 970.7 556.1 1057.8 798.6 468 2.19 1 FALSE 0.0007151 0.01034 0.399 -250 115112 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLIIGVSSDR [K].hLIIGVSSDR.[G] N-Term(TMT6plex) 9 Q8C2Q8; A2AKU9 ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1;ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1 A2AKV0; A2AKV1; A2AKV2; Q9ERA8; Q8C2Q8; Q9D9D7; Q3UD06; A2AKV3; A2AKU9 "ATP synthase, H+-transporting, mitochondrial F1 complex, gamma polypeptide 1 (Fragment) OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase, H+-transporting, mitochondrial F1 complex, gamma polypeptide 1 (Fragment) OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase, H+-transporting, mitochondrial F1 complex, gamma polypeptide 1 (Fragment) OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=2 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=2 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase, H+-transporting, mitochondrial F1 complex, gamma polypeptide 1 (Fragment) OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1" 0 3 3 0.3473 0 1 1 1 442.59549 1325.77192 1325.77387 -1.47 -0.00065 0/0 0 0 13427585 HCD 30 MS2 40.40418 247.7 66.898 75.0514 23034 23034 23028 QEplus033719.raw F4 279.5 189.8 265.2 237.8 240.9 272.9 290 3.11 2 FALSE 1.14E-05 6.14E-06 1.088 -250 115127 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAGAQIQGMK [R].aAGAQIQGMk.[E] N-Term(TMT6plex); K10(TMT6plex) 9 Q61941 "NAD(P) transhydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Nnt PE=1 SV=2" Q8BGK0; Q61941; Q8C9V5; Q8C337; Q922E1; E9Q8F4; Q8C1W8; Q3TWH2; Q8C3H2 "Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=1 SV=1; NAD(P) transhydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Nnt PE=1 SV=2; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=1 SV=1; AlaDh_PNT_N domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=2 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=1 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=2 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=2 SV=1; Proton-translocating NAD(P)(+) transhydrogenase OS=Mus musculus OX=10090 GN=Nnt PE=2 SV=1" 0 2 2 0.6824 0 1 1 1 716.92133 1432.83537 1432.83464 0.51 0.00037 0/0 0 0 5686811 HCD 30 MS2 0 640.8 110 75.0565 23036 23036 23028 QEplus033719.raw F4 674.5 537 712.3 612 608.1 701.2 529 4.66 1 FALSE 1.14E-05 6.67E-09 1.651 -250 115132 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NASDVMYK [K].nASDVMYk.[K] N-Term(TMT6plex); K8(TMT6plex) 4 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; A0A571BF46; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 2 2 0.6016 0 1 1 1 693.37909 1385.7509 1385.74991 0.72 0.0005 0/0 0 0 5401961.5 HCD 30 MS2 78.17081 816.6 110 75.0615 23038 23038 23028 QEplus033719.raw F4 816.9 438.4 866 1072.9 601 1104.5 320 2.51 1 FALSE 0.0001504 0.003461 0.543 -250 115136 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALTSFER [K].aLTSFER.[D] N-Term(TMT6plex) 2 Q8BMS1 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1" Q8BMS1; Q3TB39 "Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1; 3HCDH_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hadha PE=2 SV=1" 0 2 2 0.4897 0 1 1 1 526.8009 1052.59453 1052.59378 0.72 0.00038 0/0 0 0 12291993 HCD 30 MS2 45.53785 1245.4 110 75.0688 23040 23040 23039 QEplus033719.raw F4 1223.5 849.5 1321.7 1263.2 1167.2 1647.2 142 1.94 1 FALSE 0.003109 0.06054 0.113 -250 115165 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVNVSALSR [R].gVNVSALSR.[D] N-Term(TMT6plex) 4 P50516 V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a PE=1 SV=2 P50516; D3YWH3; P50516-2; D3Z1B9 V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a PE=1 SV=2; V-type proton ATPase catalytic subunit A (Fragment) OS=Mus musculus OX=10090 GN=Atp6v1a PE=1 SV=1; Isoform 2 of V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a; V-type proton ATPase catalytic subunit A (Fragment) OS=Mus musculus OX=10090 GN=Atp6v1a PE=1 SV=1 0 2 2 0.5125 0 1 1 1 566.33832 1131.66936 1131.66834 0.9 0.00051 0/0 0 0 19926020 HCD 30 MS2 9.991058 1016.4 110 75.076 23043 23043 23039 QEplus033719.raw F4 1004.2 814.2 1161.2 898.8 1055.6 1164.7 353 2.79 1 FALSE 1.14E-05 2.42E-06 1.164 -250 115190 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPVEPEVAIHR [K].tPVEPEVAIHR.[I] N-Term(TMT6plex) 1 Q5BLK2 40S ribosomal protein S20 OS=Mus musculus OX=10090 GN=Rps20 PE=1 SV=1 Q5BLK2 40S ribosomal protein S20 OS=Mus musculus OX=10090 GN=Rps20 PE=1 SV=1 0 2 2 0.6124 0 1 1 1 738.92236 1476.83745 1476.83719 0.17 0.00013 0/0 0 0 8495164 HCD 30 MS2 27.98581 440.6 110 75.0833 23046 23046 23039 QEplus033719.raw F4 476.8 345.8 493.7 389.8 424.8 512.6 527 4.18 1 FALSE 1.14E-05 4.68E-06 1.11 -250 115199 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GFSAEQIAR [R].gFSAEQIAR.[W] N-Term(TMT6plex) 4 A2ADH1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit MAGT1 OS=Mus musculus OX=10090 GN=Magt1 PE=1 SV=1 A2ADH1; Q9CQY5-2; Q9CQY5-3; Q9CQY5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit MAGT1 OS=Mus musculus OX=10090 GN=Magt1 PE=1 SV=1; Isoform 2 of Magnesium transporter protein 1 OS=Mus musculus OX=10090 GN=Magt1; Isoform 3 of Magnesium transporter protein 1 OS=Mus musculus OX=10090 GN=Magt1; Magnesium transporter protein 1 OS=Mus musculus OX=10090 GN=Magt1 PE=1 SV=1 0 2 2 0.5957 0 1 1 1 604.33429 1207.6613 1207.66325 -1.61 -0.00097 0/0 0 0 7822128 HCD 30 MS2 34.32806 977.5 110 75.0858 23047 23047 23039 QEplus033719.raw F4 904 871.7 1017.5 823.5 1169.4 1079 303 2.3 1 FALSE 1.14E-05 2.04E-05 0.988 -250 115205 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYQGPLK [R].dYQGPLk.[E] N-Term(TMT6plex); K7(TMT6plex) 5 Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1;ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TS02; Q3TED3; Q3UEA1; Q3V117; Q91V92 ATP citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate (pro-S-)-lyase (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 0 3 3 0.2143 0 1 1 1 426.92065 1278.74741 1278.74581 1.25 0.00053 0/0 0 0 7097118 HCD 30 MS2 26.26269 458.4 110 75.0883 23048 23048 23039 QEplus033719.raw F4 513.5 396.6 515.2 319.3 509.9 496 383 2.66 2 FALSE 0.001506 0.02231 0.263 -250 115213 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AWENSPNLR [K].aWENSPNLR.[E] N-Term(TMT6plex) 7 A0A0A0MQ79 Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1 A0A0A0MQ79; S4R294; S4R2L9; S4R2J9; Q3TLH4; S4R209; Q3TLH4-5 Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C (Fragment) OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=3; Protein PRRC2C (Fragment) OS=Mus musculus OX=10090 GN=Prrc2c PE=1 SV=1; Isoform 5 of Protein PRRC2C OS=Mus musculus OX=10090 GN=Prrc2c 0 2 2 0.5629 0 1 1 1 658.35223 1315.69719 1315.69561 1.2 0.00079 0/0 0 0 6586102.5 HCD 30 MS2 35.86644 523.6 110 75.0908 23049 23049 23039 QEplus033719.raw F4 531.1 477.4 573.6 402.8 616.6 540.1 211 3.02 1 FALSE 0.0001504 0.003434 0.544 -250 115292 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSKEDIER [R].lSkEDIER.[M] N-Term(TMT6plex); K3(TMT6plex) 16 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; Q3UBR0; Q3UXU1; Q3TH56; Q3TH04; Q3TZJ3; P63017; Q3TQ13; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 1 2 2 0.4151 0 1 1 1 724.43048 1447.85369 1447.85206 1.12 0.00081 0/0 0 0 8467355 HCD 30 MS2 0 338.1 110 75.12 23060 23060 23050 QEplus033719.raw F4 319.6 351.6 384.8 330.3 298.7 343.5 416 2.65 1 FALSE 4.43E-05 0.001677 0.615 -250 115302 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAEQAATQLK [K].nAEQAATQLk.[V] N-Term(TMT6plex); K10(TMT6plex) 33 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 2 2 0.6046 0 1 1 1 766.44263 1531.87798 1531.88443 -4.21 -0.00322 0/0 0 0 4729527.5 HCD 30 MS2 26.09785 588 110 75.1273 23062 23062 23061 QEplus033719.raw F4 587.8 433.5 657.6 586.2 536.3 726.6 451 3.06 1 FALSE 1.14E-05 9.57E-08 1.431 -250 115323 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQASIEK [K].mQASIEk.[GAF] N-Term(TMT6plex); K7(TMT6plex) 7 Q5SQB7 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1 Q5SQB7; Q5SQB0; Q5BL09; Q5U438; Q9DAY9; Q5SQB5; Q3U536 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Npm1 protein OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1 0 3 3 0.3392 0 1 1 1 422.24976 1264.73471 1264.73353 0.94 0.0004 0/0 0 0 15596349 HCD 30 MS2 49.65104 557.9 36.146 75.1368 23066 23066 23061 QEplus033719.raw F4 574.3 470.1 610.4 333.6 666.5 692.4 432 2.86 1 FALSE 0.0006294 0.009471 0.413 -250 115353 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVCEETLK [K].aVcEETLk.[T] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 1 Q8R4N0 "Citramalyl-CoA lyase, mitochondrial OS=Mus musculus OX=10090 GN=Clybl PE=1 SV=2" Q8R4N0 "Citramalyl-CoA lyase, mitochondrial OS=Mus musculus OX=10090 GN=Clybl PE=1 SV=2" 0 2 2 0.4948 0 1 1 1 704.39789 1407.7885 1407.79177 -2.32 -0.00164 0/0 0 0 4736957 HCD 30 MS2 0 402.1 110 75.1492 23071 23071 23061 QEplus033719.raw F4 399.3 291.3 389.3 480.3 394.7 457.6 394 2.91 1 FALSE 1.14E-05 0.0001933 0.802 -250 115364 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MSEDKPQDYK [R].mSEDkPQDYk.[K] N-Term(TMT6plex); K5(TMT6plex); K10(TMT6plex) 4 Q02248 Catenin beta-1 OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1 Q80VE7; Q02248; Q3UZT7; F7CRC6 Ctnnb1 protein (Fragment) OS=Mus musculus OX=10090 GN=Ctnnb1 PE=2 SV=1; Catenin beta-1 OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctnnb1 PE=2 SV=1; Catenin beta-1 (Fragment) OS=Mus musculus OX=10090 GN=Ctnnb1 PE=1 SV=1 0 3 3 0.4783 0 1 1 1 643.35168 1928.0405 1928.04022 0.14 0.00009 0/0 0 0 3761882.75 HCD 30 MS2 12.20401 672.9 110 75.159 23074 23074 23072 QEplus033719.raw F4 693.4 467.2 733.2 518.5 966.9 658 408 2.07 1 FALSE 0.003321 0.06431 0.103 -250 115370 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIPEYCR [R].vIPEYcR.[A] N-Term(TMT6plex); C6(Carbamidomethyl) 4 Q5XJY5 Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=1 SV=2 Q8C0G7; Q5XJY5; Q8R1S6; Q3U4S9 Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1; Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=1 SV=2; Coatomer subunit delta (Fragment) OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1; Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1 0 2 2 0.6584 0 1 1 1 583.31592 1165.62456 1165.6237 0.74 0.00043 0/0 0 0 16610700 HCD 30 MS2 28.86429 1072.2 81.918 75.1613 23075 23075 23072 QEplus033719.raw F4 1013.3 1037.3 1100.5 803.3 1442.6 1036.4 184 2.43 1 FALSE 0.005276 0.08991 0.034 -250 115387 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIYSEELR [K].nIYSEELR.[E] N-Term(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 0 2 2 0.404 0 1 1 1 626.84033 1252.67339 1252.67348 -0.08 -0.00005 0/0 0 0 7665746 HCD 30 MS2 72.12231 912.5 110 75.1663 23077 23077 23072 QEplus033719.raw F4 930 732.7 971.5 855.6 940.3 1045.2 264 2.97 1 FALSE 1.14E-05 0.0004168 0.738 -250 115392 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVCGVVSK [K].tVcGVVSk.[R] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 9 G3UVV4 Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1 Q3UE51; Q3TTB4; G3UVV4; Q3TJE3; P17710; P17710-2; P17710-4; Q6GQU1; Q3UPC4 Hexokinase (Fragment) OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase (Fragment) OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=3; Isoform HK1-SB of Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1; Isoform HK1-SC of Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1 0 2 2 0.5248 0 1 1 1 654.39075 1307.77422 1307.77573 -1.16 -0.00076 0/0 0 0 7542645.5 HCD 30 MS2 39.72965 1261.7 110 75.1688 23078 23078 23072 QEplus033719.raw F4 1351.5 1077.4 1378.9 1050.8 1444.2 1267.1 432 2.82 1 FALSE 1.14E-05 7.93E-05 0.876 -250 115403 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYEPEMGK [K].eYEPEMGk.[V] N-Term(TMT6plex); K8(TMT6plex) 13 O55143-2; O55143; Q8R429 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 E9Q559; B1ATS5; Q64518-3; Q64518; O55143-2; Q8C213; Q64518-1; B1ATS4; O55143; Q5DTI2; Q3U1K2; O54994; Q8R429 Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=1; Isoform SERCA3C of Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus OX=10090 GN=Atp2a3; Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=4; Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a3 PE=2 SV=1; Isoform SERCA3B of Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus OX=10090 GN=Atp2a3; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a3 PE=2 SV=1; Sarcoplasmic reticulum Ca2+-ATPase (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 0 2 2 0.5152 0 1 1 1 720.87604 1440.7448 1440.74449 0.22 0.00016 0/0 0 0 14279508 HCD 30 MS2 16.38371 1107.2 110 75.1761 23081 23081 23072 QEplus033719.raw F4 1343.8 354.3 891.4 2088.3 397.4 1568.2 207 3.3 3 FALSE 1.14E-05 0.0002105 0.795 -250 115408 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGAAGGPEEEAEKPVK [R].aGAAGGPEEEAEkPVk.[T] N-Term(TMT6plex); K13(TMT6plex); K16(TMT6plex) 2 Q6P8I4 PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1 Q3TM89; Q6P8I4 PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1; PEST proteolytic signal-containing nuclear protein OS=Mus musculus OX=10090 GN=Pcnp PE=1 SV=1 0 4 4 0.672 0 1 1 1 557.5694 2227.25576 2227.25372 0.91 0.00051 0/0 0 0 6469043 HCD 30 MS2 16.25745 538.4 110 75.1786 23082 23082 23072 QEplus033719.raw F4 548.7 554.8 597.9 380.9 600.7 547.2 442 5.64 1 FALSE 1.14E-05 2.71E-12 2.295 -250 115433 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVCGVVSK [K].tVcGVVSk.[R] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 9 G3UVV4 Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1 Q3UE51; Q3TTB4; G3UVV4; Q3TJE3; P17710; P17710-2; P17710-4; Q6GQU1; Q3UPC4 Hexokinase (Fragment) OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase (Fragment) OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=3; Isoform HK1-SB of Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1; Isoform HK1-SC of Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1 0 2 2 0.5217 0 1 1 1 654.3952 1307.78313 1307.77573 5.66 0.0037 0/0 0 0 11808664 HCD 30 MS2 40.4556 1458.1 110 75.1932 23087 23087 23083 QEplus033719.raw F4 1528.8 1248.2 1559.3 1254.8 1670.9 1486.4 335 2.99 1 FALSE 1.14E-05 6.27E-05 0.896 -250 115443 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GASYSSIPK [R].gASYSSIPk.[F] N-Term(TMT6plex); K9(TMT6plex) 3 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q3UXJ8; Q8VHX6-2; Q8VHX6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flnc PE=2 SV=1; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 3 3 0.4865 0 1 1 1 456.60361 1367.79627 1367.79349 2.03 0.00093 0/0 0 0 10814631 HCD 30 MS2 38.55302 648.4 110 75.1957 23088 23088 23083 QEplus033719.raw F4 672.2 473.4 703.8 660.4 625.2 755.2 356 2.59 1 FALSE 0.001108 0.01438 0.34 -250 115451 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPASTETSCPLSK [R].kPASTETScPLSk.[L] N-Term(TMT6plex); K1(TMT6plex); C9(Carbamidomethyl); K13(TMT6plex) 3 Q6P549 "Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Mus musculus OX=10090 GN=Inppl1 PE=1 SV=1" A0A1B0GR64; A0A087WPT7; Q6P549 "Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 (Fragment) OS=Mus musculus OX=10090 GN=Inppl1 PE=1 SV=1; Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Inppl1 PE=1 SV=1; Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Mus musculus OX=10090 GN=Inppl1 PE=1 SV=1" 0 3 3 0.7129 0 1 1 1 698.40039 2093.18662 2093.18795 -0.64 -0.00044 0/0 0 0 3119922 HCD 30 MS2 0 381.3 110 75.2008 23090 23090 23083 QEplus033719.raw F4 471 214.8 408.2 444.5 237.7 511.7 451 5.33 1 FALSE 1.14E-05 6.65E-16 2.982 -250 115467 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQGSTSNSDWMK [R].sQGSTSNSDWMk.[N] N-Term(TMT6plex); K12(TMT6plex) 7 B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 A0PJ96; P14873; Q3UPV4; Q3TZM8; Q3TYV8; B2RQQ5; Q8CFR9 Mtap1b protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1; Mtap1b protein (Fragment) OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 0 2 2 0.7571 0 1 1 1 893.44562 1785.88396 1785.88417 -0.12 -0.00011 0/0 0 0 5690126.5 HCD 30 MS2 0 365.2 110 75.2058 23092 23092 23083 QEplus033719.raw F4 378.3 289.7 408.9 325.6 354.8 434 164 4.24 1 FALSE 1.14E-05 9.98E-12 2.187 -250 115472 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVCEETLK [K].aVcEETLk.[T] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 1 Q8R4N0 "Citramalyl-CoA lyase, mitochondrial OS=Mus musculus OX=10090 GN=Clybl PE=1 SV=2" Q8R4N0 "Citramalyl-CoA lyase, mitochondrial OS=Mus musculus OX=10090 GN=Clybl PE=1 SV=2" 0 2 2 0.4923 0 1 1 1 704.4021 1407.79692 1407.79177 3.66 0.00257 0/0 0 0 4777027 HCD 30 MS2 0 382.6 110 75.2083 23093 23093 23083 QEplus033719.raw F4 392.4 301.5 382.2 439.4 362.5 417.6 475 2.6 1 FALSE 1.14E-05 0.000211 0.795 -250 115482 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IIAPPERK [KR].iIAPPERk.[Y] N-Term(TMT6plex); K8(TMT6plex) 32 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q8BFZ3; Q3TG92; P63268; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61275; Q3UAF6; Q3U122; E9Q1F2; Q3UAA9; B2RRX1; Q61272; Q3U5R4; Q3UAF7; Q99NC5; Q3TIJ9; P62737; P68134; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P68033; P63260; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 1 2 2 0.5036 0 1 1 1 691.45044 1381.8936 1381.89314 0.33 0.00023 0/0 0 0 111857632 HCD 30 MS2 5.146863 448.1 18.075 75.2156 23095 23095 23094 QEplus033719.raw F4 477.8 359.4 478.5 378.6 559.3 435.3 57 2.74 4 FALSE 0.005488 0.09304 0.026 -250 115501 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMEAVAAQGK [K].aMEAVAAQGk.[VA] N-Term(TMT6plex); K10(TMT6plex) 3 Q3U7Z6; Q5NCI4 Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam1 PE=1 SV=1;Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam2 PE=1 SV=1 Q3U7Z6; Q6NWV5; Q5NCI4 Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam1 PE=1 SV=1; Pgam1 protein (Fragment) OS=Mus musculus OX=10090 GN=Pgam1 PE=2 SV=1; Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam2 PE=1 SV=1 0 3 3 0.671 0 1 1 1 478.61087 1433.81806 1433.81866 -0.42 -0.0002 0/0 0 0 88884904 HCD 30 MS2 32.80936 956.2 16.903 75.2204 23097 23097 23094 QEplus033719.raw F4 966.9 630.6 961 1082.8 870.1 1225.5 496 3.07 2 FALSE 1.14E-05 0.000591 0.708 -250 115505 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESDVPLK [R].eSDVPLk.[S] N-Term(TMT6plex); K7(TMT6plex) 1 Q9CPT4 Myeloid-derived growth factor OS=Mus musculus OX=10090 GN=Mydgf PE=1 SV=1 Q9CPT4 Myeloid-derived growth factor OS=Mus musculus OX=10090 GN=Mydgf PE=1 SV=1 0 2 2 0.2297 0 1 1 1 623.37848 1245.74968 1245.74547 3.38 0.0021 0/0 0 0 24256780 HCD 30 MS2 35.7419 1400.8 64.72 75.2227 23098 23098 23094 QEplus033719.raw F4 1437.4 1171.1 1528.7 1089.2 1737.3 1441 430 2.22 1 FALSE 0.001343 0.01903 0.29 -250 115515 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVCGVVSK [K].tVcGVVSk.[R] N-Term(TMT6plex); C3(Carbamidomethyl); K8(TMT6plex) 9 G3UVV4 Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1 Q3UE51; Q3TTB4; G3UVV4; Q3TJE3; P17710; P17710-2; P17710-4; Q6GQU1; Q3UPC4 Hexokinase (Fragment) OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase (Fragment) OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=3; Isoform HK1-SB of Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1; Isoform HK1-SC of Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1 0 2 2 0.5201 0 1 1 1 654.39099 1307.77471 1307.77573 -0.78 -0.00051 0/0 0 0 14132706 HCD 30 MS2 29.15259 1518.1 98.071 75.2272 23100 23100 23094 QEplus033719.raw F4 1572.2 1281 1614.9 1296.8 1753.4 1590.4 426 2.98 1 FALSE 1.14E-05 0.0001331 0.833 -250 115525 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAVVQYSGQGQQQPGR [R].vAVVQYSGQGQQQPGR.[A] N-Term(TMT6plex) 2 Q04857 Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 Q99LW4; Q04857 Col6a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col6a1 PE=2 SV=1; Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 0 3 3 0.8285 0 1 1 1 644.34705 1931.02658 1931.02964 -1.58 -0.00102 0/0 0 0 8057299 HCD 30 MS2 0 402.9 110 75.2297 23101 23101 23094 QEplus033719.raw F4 385.6 324.9 425.8 344.3 491.3 445.3 373 5.48 1 FALSE 1.14E-05 4.53E-14 2.632 -250 115562 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RKLEDECSELK [K].rkLEDEcSELk.[KR] N-Term(TMT6plex); K2(TMT6plex); C7(Carbamidomethyl); K11(TMT6plex) 15 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; B2RWX0; B2RQQ1; I6L963; B2RY26; Q5BKR0; Q6P8P3; B2RXX9; Q3UQQ3; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myh6 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myh6 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 2 4 4 0.4519 0 1 1 1 524.30133 2094.18349 2094.1832 0.14 0.00007 0/0 0 0 11872120 HCD 30 MS2 31.92775 1008.5 110 75.2521 23109 23109 23105 QEplus033719.raw F4 1166.8 596.3 964.1 1204.4 758.6 1360.9 481 4.16 5 FALSE 1.14E-05 6.71E-05 0.89 -250 115582 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHIGADGVK [K].vHIGADGVk.[M] N-Term(TMT6plex); K9(TMT6plex) 6 E9Q616; Q6UIL4 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1;AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1 A0PJF4; E9Q616; Q6UIL4; Q8CGE7; Q8VDN3; Q8BKS2 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=2 0 2 2 0.1975 0 1 1 1 677.41663 1353.82598 1353.82546 0.38 0.00026 0/0 0 0 7774751.5 HCD 30 MS2 12.0043 584.4 110 75.2596 23112 23112 23105 QEplus033719.raw F4 561.9 511.6 659.1 437.1 643.5 693.1 224 3.19 2 FALSE 1.14E-05 2.50E-06 1.162 -250 115588 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSPGETDAFGNSEGK [K].dSPGETDAFGNSEGk.[E] N-Term(TMT6plex); K15(TMT6plex) 2 D3Z7P3 "Glutaminase kidney isoform, mitochondrial OS=Mus musculus OX=10090 GN=Gls PE=1 SV=1" D3Z7P3-2; D3Z7P3 "Isoform 2 of Glutaminase kidney isoform, mitochondrial OS=Mus musculus OX=10090 GN=Gls; Glutaminase kidney isoform, mitochondrial OS=Mus musculus OX=10090 GN=Gls PE=1 SV=1" 0 3 3 0.7923 0 1 1 1 656.98962 1968.95432 1968.95509 -0.39 -0.00026 0/0 0 0 7752661 HCD 30 MS2 29.27357 656.2 110 75.2621 23113 23113 23105 QEplus033719.raw F4 711.1 540 718.9 542.3 676.6 748.5 126 4.67 1 FALSE 1.14E-05 2.10E-09 1.746 -250 115594 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSPNEGLSGNPADLERR [K].tSPNEGLSGNPADLERR.[E] N-Term(TMT6plex) 6 G5E829 Plasma membrane calcium-transporting ATPase 1 OS=Mus musculus OX=10090 GN=Atp2b1 PE=1 SV=1 Q3TDJ2; Q05CJ5; A0A1W2P7C7; A0A1W2P7R3; Q3TC38; G5E829 Cation_ATPase_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Atp2b1 PE=2 SV=1; Atp2b1 protein (Fragment) OS=Mus musculus OX=10090 GN=Atp2b1 PE=2 SV=1; Plasma membrane calcium-transporting ATPase 1 (Fragment) OS=Mus musculus OX=10090 GN=Atp2b1 PE=1 SV=1; Plasma membrane calcium-transporting ATPase 1 (Fragment) OS=Mus musculus OX=10090 GN=Atp2b1 PE=1 SV=1; Cation_ATPase_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Atp2b1 PE=2 SV=1; Plasma membrane calcium-transporting ATPase 1 OS=Mus musculus OX=10090 GN=Atp2b1 PE=1 SV=1 1 3 3 0.6586 0 1 1 1 681.35211 2042.04178 2042.04641 -2.27 -0.00154 0/0 0 0 5932707 HCD 30 MS2 0 462.8 110 75.2646 23114 23114 23105 QEplus033719.raw F4 451.5 433.2 528.9 354.7 514.4 494.1 260 4.98 1 FALSE 1.14E-05 1.58E-13 2.529 -250 115607 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QILGQAK [R].qILGQAk.[K] N-Term(TMT6plex); K7(TMT6plex) 1 Q62425 Cytochrome c oxidase subunit NDUFA4 OS=Mus musculus OX=10090 GN=Ndufa4 PE=1 SV=2 Q62425 Cytochrome c oxidase subunit NDUFA4 OS=Mus musculus OX=10090 GN=Ndufa4 PE=1 SV=2 0 2 2 0.2442 0 1 1 1 608.3952 1215.78313 1215.78253 0.49 0.0003 0/0 0 0 46935796 HCD 30 MS2 34.10022 1107.4 36.587 75.2745 23117 23117 23116 QEplus033719.raw F4 1102.8 771.2 1202.5 1166.2 996.5 1404.9 284 2.58 1 FALSE 0.0008268 0.01135 0.383 -250 115626 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EYEPEMGK [K].eYEPEMGk.[V] N-Term(TMT6plex); K8(TMT6plex) 13 O55143-2; O55143; Q8R429 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 E9Q559; B1ATS5; Q64518-3; Q64518; O55143-2; Q8C213; Q64518-1; B1ATS4; O55143; Q5DTI2; Q3U1K2; O54994; Q8R429 Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=1; Isoform SERCA3C of Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus OX=10090 GN=Atp2a3; Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=4; Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a3 PE=2 SV=1; Isoform SERCA3B of Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus OX=10090 GN=Atp2a3; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a3 PE=2 SV=1; Sarcoplasmic reticulum Ca2+-ATPase (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 0 3 3 0.6222 0 1 1 1 480.91959 1440.74421 1440.74449 -0.2 -0.00009 0/0 0 0 19843050 HCD 30 MS2 42.66239 1278.4 66.692 75.2792 23119 23119 23116 QEplus033719.raw F4 1535.9 619.9 1125 1703.6 1110.6 1575.2 203 2.7 3 FALSE 0.0008805 0.01229 0.369 -250 115629 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQSKPEDEADEWAR [K].tQSkPEDEADEWAR.[R] N-Term(TMT6plex); K4(TMT6plex) 7 E9PYJ9; Q9JKS4 LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1;LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1 Q9JKS4-3; E9PYJ9; Q9JKS4-6; Q9JKS4; Q9JKS4-5; Q9JKS4-4; Q9JKS4-2 Isoform 3 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3; LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1; Isoform 6 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3; LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 PE=1 SV=1; Isoform 5 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3; Isoform 4 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3; Isoform 2 of LIM domain-binding protein 3 OS=Mus musculus OX=10090 GN=Ldb3 0 3 3 0.6381 0 1 1 1 707.36011 2120.06577 2120.06603 -0.12 -0.00009 0/0 0 0 14284379 HCD 30 MS2 0 516.7 110 75.2842 23121 23121 23116 QEplus033719.raw F4 600.7 210.3 558.9 677.4 250.4 802.6 258 3.15 2 FALSE 1.14E-05 1.23E-08 1.6 -250 115647 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAEQAATQLK [K].nAEQAATQLk.[V] N-Term(TMT6plex); K10(TMT6plex) 33 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 2 2 0.6034 0 1 1 1 766.44586 1531.88445 1531.88443 0.01 0.00001 0/0 0 0 10319271 HCD 30 MS2 0 487.5 110 75.2893 23123 23123 23116 QEplus033719.raw F4 484.4 414.3 551 406.7 504.4 564.2 478 3.53 1 FALSE 1.14E-05 6.40E-08 1.464 -250 115668 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVTIMPK [K].rVTIMPk.[D] N-Term(TMT6plex); K7(TMT6plex) 8 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 1 3 3 0.4879 0 1 1 1 434.94965 1302.83438 1302.83318 0.92 0.0004 0/0 0 0 982608320 HCD 30 MS2 4.379017 461 1.176 75.3042 23128 23128 23127 QEplus033719.raw F4 383.2 508 508.2 287 687.1 392.3 279 3.3 2 FALSE 0.0006216 0.009297 0.416 -250 115680 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MHVRPLAPAAVQDAR [R].mHVRPLAPAAVQDAR.[F] N-Term(TMT6plex) 3 F8VQK4 Acetylcholine receptor subunit gamma OS=Mus musculus OX=10090 GN=Chrng PE=3 SV=1 F8VQK4; P04760; P04760-2 Acetylcholine receptor subunit gamma OS=Mus musculus OX=10090 GN=Chrng PE=3 SV=1; Acetylcholine receptor subunit gamma OS=Mus musculus OX=10090 GN=Chrng PE=2 SV=1; Isoform Short of Acetylcholine receptor subunit gamma OS=Mus musculus OX=10090 GN=Chrng 0 4 4 0.5361 0 1 1 1 466.0166 1861.04458 1861.04279 0.96 0.00045 0/0 0 0 2496665.25 HCD 30 MS2 24.56059 456.2 110 75.3091 23130 23130 23127 QEplus033719.raw F4 467.8 353.8 509 402 444.5 560.3 493 4.85 1 FALSE 1.14E-05 6.86E-06 1.079 -250 115692 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQLKPPATSDA [K].aQLkPPATSDA.[-] N-Term(TMT6plex); K4(TMT6plex) 2 Q80YP5 Integrin alpha 5 (Fibronectin receptor alpha) OS=Mus musculus OX=10090 GN=Itga5 PE=2 SV=1 Q80YP5; P11688 Integrin alpha 5 (Fibronectin receptor alpha) OS=Mus musculus OX=10090 GN=Itga5 PE=2 SV=1; Integrin alpha-5 OS=Mus musculus OX=10090 GN=Itga5 PE=1 SV=3 0 2 2 0.5364 0 1 1 1 778.95618 1556.90508 1556.90483 0.16 0.00012 0/0 0 0 8815429 HCD 30 MS2 0 402.3 110 75.3142 23132 23132 23127 QEplus033719.raw F4 400.3 375.4 438.5 286 542.7 370.6 364 2.2 1 FALSE 0.0009542 0.01297 0.359 -250 115720 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LCQPYGK [K].lcQPYGk.[I] N-Term(TMT6plex); C2(Carbamidomethyl); K7(TMT6plex) 23 A0A5F8MPX7; Q3TTX8 "RNA-binding motif, single-stranded-interacting protein 2 OS=Mus musculus OX=10090 GN=Rbms2 PE=1 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Rbms1 PE=2 SV=1" A0A5F8MPX7; Q8BWL5-6; Q9WTS9; Q3TTX8; Q8BUX2; A0A6I8MX12; Q3UKR8; Q8BWL5-4; Q8VC70; Q8BWL5; Q3TRU8; Q91W59; E9Q7G6; Q3UGN4; Q8BWL5-5; G3UZJ9; Q8BKJ2; Q3TPK8; Q91W59-2; Q8BWL5-3; E9PZ21; Q8BWL5-2; Q3V0L4 "RNA-binding motif, single-stranded-interacting protein 2 OS=Mus musculus OX=10090 GN=Rbms2 PE=1 SV=1; Isoform 6 of RNA-binding motif, single-stranded-interacting protein 3 OS=Mus musculus OX=10090 GN=Rbms3; Scr3 OS=Mus musculus OX=10090 GN=Rbms2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rbms1 PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Rbms3 PE=2 SV=1; RNA-binding motif, single-stranded-interacting protein 3 OS=Mus musculus OX=10090 GN=Rbms3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rbms1 PE=2 SV=1; Isoform 4 of RNA-binding motif, single-stranded-interacting protein 3 OS=Mus musculus OX=10090 GN=Rbms3; RNA-binding motif, single-stranded-interacting protein 2 OS=Mus musculus OX=10090 GN=Rbms2 PE=1 SV=1; RNA-binding motif, single-stranded-interacting protein 3 OS=Mus musculus OX=10090 GN=Rbms3 PE=2 SV=2; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Rbms3 PE=2 SV=1; RNA-binding motif, single-stranded-interacting protein 1 OS=Mus musculus OX=10090 GN=Rbms1 PE=1 SV=1; RNA-binding motif, single-stranded-interacting protein 2 OS=Mus musculus OX=10090 GN=Rbms2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rbms2 PE=2 SV=1; Isoform 5 of RNA-binding motif, single-stranded-interacting protein 3 OS=Mus musculus OX=10090 GN=Rbms3; RNA-binding motif, single-stranded-interacting protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Rbms3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rbms3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Rbms1 PE=2 SV=1; Isoform 2 of RNA-binding motif, single-stranded-interacting protein 1 OS=Mus musculus OX=10090 GN=Rbms1; Isoform 3 of RNA-binding motif, single-stranded-interacting protein 3 OS=Mus musculus OX=10090 GN=Rbms3; RNA-binding motif, single-stranded-interacting protein 1 OS=Mus musculus OX=10090 GN=Rbms1 PE=1 SV=1; Isoform 2 of RNA-binding motif, single-stranded-interacting protein 3 OS=Mus musculus OX=10090 GN=Rbms3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rbms1 PE=2 SV=1" 0 2 2 0.3736 0 1 1 1 662.37952 1323.75176 1323.74951 1.69 0.00112 0/0 0 0 5186429.5 HCD 30 MS2 37.35866 793.4 110 75.3242 23136 23136 23127 QEplus033719.raw F4 731.1 806.1 925.9 587.3 925.5 784.5 337 2.65 2 FALSE 0.00079 0.01104 0.388 -250 115729 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGTITTFEHAHNMR [K].tGTITTFEHAHNMR.[V] N-Term(TMT6plex) 15 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q3TSK4; Q8C153; P58252; O89070; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3UZ14; Q3TK17; Q3TLB1; Q3TX47 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Elongation factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 0 2 2 0.7754 0 1 1 1 922.96429 1844.92131 1844.92748 -3.34 -0.00308 0/0 0 0 5002480.5 HCD 30 MS2 0 302.4 110 75.3267 23137 23137 23127 QEplus033719.raw F4 317.8 224.5 339.3 287.2 304.3 341.5 197 5.12 1 FALSE 1.14E-05 1.42E-15 2.918 -250 115736 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVTIMPK [K].rVTIMPk.[D] N-Term(TMT6plex); K7(TMT6plex) 8 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 1 2 2 0.533 0 1 1 1 651.92041 1302.83354 1302.83318 0.28 0.00018 0/0 0 0 52869292 HCD 30 MS2 4.645401 784.4 32.055 75.3341 23139 23139 23138 QEplus033719.raw F4 683.9 799.4 871 507.7 1140.7 703.4 282 2.12 2 FALSE 0.00192 0.03298 0.202 -250 115757 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVDQLTNDK [R].qVDQLTNDk.[A] N-Term(TMT6plex); K9(TMT6plex) 9 Q3TWV0; Q3TFD9 Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1 A4IF59; A0A0A6YWC8; Q3TWV0; Q3U6S1; Q3UD36; Q3UAX1; Q3V2S4; Q3TFD9; Q5FWJ3 Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1 0 2 2 0.5161 0 1 1 1 759.93109 1518.85491 1518.85279 1.39 0.00106 0/0 0 0 5673741 HCD 30 MS2 20.94374 572.6 110 75.3411 23142 23142 23138 QEplus033719.raw F4 565 544.9 607.8 398.6 760.9 558.4 459 3.41 2 FALSE 1.14E-05 1.09E-06 1.23 -250 115767 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CECPNGMTLDATGR [K].cEcPNGMTLDATGR.[I] N-Term(TMT6plex); C1(Carbamidomethyl); C3(Carbamidomethyl) 3 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q60784 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Fibrillin-1 (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1 0 2 2 0.8065 0 1 1 1 905.90771 1810.80815 1810.80835 -0.11 -0.0001 0/0 0 0 6035137.5 HCD 30 MS2 0 334.7 110 75.3437 23143 23143 23138 QEplus033719.raw F4 363.4 167.8 372.9 507.2 134.2 462.7 19 3.98 1 FALSE 1.14E-05 3.08E-12 2.284 -250 115774 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVTAYTVDVTGR [R].rVTAYTVDVTGR.[E] N-Term(TMT6plex) 3 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 E9Q616; A0A494BBD5; Q8BRB8 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; AHNAK nucleoprotein (desmoyokin) (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; PDZ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1 1 3 3 0.6637 0 1 1 1 522.96509 1566.88071 1566.88012 0.38 0.0002 0/0 0 0 27891032 HCD 30 MS2 53.83158 1125.7 54.816 75.3459 23144 23144 23138 QEplus033719.raw F4 1186.4 1111 1336.1 980.2 922 1218.5 384 5.65 1 FALSE 1.14E-05 8.38E-10 1.822 -250 115782 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKDTESDVSK [K].lkDTESDVSk.[M] N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex) 34 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q6A0E9; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; MKIAA0004 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0004 PE=4 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 1 3 3 0.4587 0 1 1 1 603.6911 1809.05875 1809.05726 0.83 0.0005 0/0 0 0 12344680 HCD 30 MS2 18.0239 1066.8 110 75.3484 23145 23145 23138 QEplus033719.raw F4 1049.7 976.2 1173 1022.3 1046.6 1132.9 449 3.03 1 FALSE 1.14E-05 2.61E-07 1.348 -250 115789 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQDVAQFADCR [R].qQDVAQFADcR.[E] N-Term(TMT6plex); C10(Carbamidomethyl) 5 C0LQ87 Syncoilin isoform 2 OS=Mus musculus OX=10090 GN=Sync PE=2 SV=1 C0LQ88; C0LQ87; Q9EPM5-2; Q9EPM5-3; Q9EPM5 Syncoilin isoform 3 OS=Mus musculus OX=10090 GN=Sync PE=2 SV=1; Syncoilin isoform 2 OS=Mus musculus OX=10090 GN=Sync PE=2 SV=1; Isoform 2 of Syncoilin OS=Mus musculus OX=10090 GN=Sync; Isoform 3 of Syncoilin OS=Mus musculus OX=10090 GN=Sync; Syncoilin OS=Mus musculus OX=10090 GN=Sync PE=1 SV=1 0 2 2 0.8199 0 1 1 1 783.88007 1566.75286 1566.75321 -0.22 -0.00018 0/0 0 0 5859260 HCD 30 MS2 15.49062 331 110 75.3509 23146 23146 23138 QEplus033719.raw F4 322.2 265.7 388.7 321.2 275.8 412.5 89 3.61 1 FALSE 1.14E-05 0.0001554 0.82 -250 115801 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMQLTAGSK [K].nMQLTAGSk.[L] N-Term(TMT6plex); K9(TMT6plex) 3 Q3U5M2 Pre-mRNA-splicing factor SPF27 OS=Mus musculus OX=10090 GN=Bcas2 PE=2 SV=1 Q05CL7; Q3U5M2; Q9D287 Pre-mRNA-splicing factor SPF27 OS=Mus musculus OX=10090 GN=Bcas2 PE=2 SV=1; Pre-mRNA-splicing factor SPF27 OS=Mus musculus OX=10090 GN=Bcas2 PE=2 SV=1; Pre-mRNA-splicing factor SPF27 OS=Mus musculus OX=10090 GN=Bcas2 PE=1 SV=1 0 2 2 0.5731 0 1 1 1 704.40588 1407.80449 1407.80301 1.05 0.00074 0/0 0 0 5222132.5 HCD 30 MS2 28.89149 499.2 110 75.356 23148 23148 23138 QEplus033719.raw F4 508.4 463.7 550.7 414.2 556.6 501.4 433 3.35 1 FALSE 1.14E-05 1.69E-06 1.194 -250 115813 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GASYSSIPK [R].gASYSSIPk.[F] N-Term(TMT6plex); K9(TMT6plex) 3 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q3UXJ8; Q8VHX6-2; Q8VHX6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flnc PE=2 SV=1; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.5888 0 1 1 1 684.40057 1367.79387 1367.79349 0.28 0.00019 0/0 0 0 63695308 HCD 30 MS2 4.010358 915.8 31.451 75.3655 23151 23151 23149 QEplus033719.raw F4 965.5 478.2 1111.5 1200.5 482.6 1256.7 365 3.04 1 FALSE 1.14E-05 7.77E-06 1.068 -250 115831 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLLNVSR [K].sLLNVSR.[T] N-Term(TMT6plex) 1 Q3UPH1 Protein PRRC1 OS=Mus musculus OX=10090 GN=Prrc1 PE=1 SV=1 Q3UPH1 Protein PRRC1 OS=Mus musculus OX=10090 GN=Prrc1 PE=1 SV=1 0 2 2 0.4559 0 1 1 1 509.31662 1017.62596 1017.62541 0.54 0.00028 0/0 0 0 15693467 HCD 30 MS2 37.55603 1383.1 90.103 75.3701 23153 23153 23149 QEplus033719.raw F4 1454.2 1093.1 1415.9 1339.5 1457.8 1537.8 82 2.04 1 FALSE 0.001125 0.01489 0.334 -250 115841 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSAENLQK [R].vSAENLQk.[S] N-Term(TMT6plex); K8(TMT6plex) 7 E9PV41 Protein diaphanous homolog 1 OS=Mus musculus OX=10090 GN=Diaph1 PE=1 SV=1 E9PV41; O08808; Q5DTQ4; D3Z074; F6XC54; E9PXV7; Q3U104 Protein diaphanous homolog 1 OS=Mus musculus OX=10090 GN=Diaph1 PE=1 SV=1; Protein diaphanous homolog 1 OS=Mus musculus OX=10090 GN=Diaph1 PE=1 SV=1; MKIAA4062 protein (Fragment) OS=Mus musculus OX=10090 GN=Diaph1 PE=2 SV=1; Protein diaphanous homolog 1 OS=Mus musculus OX=10090 GN=Diaph1 PE=1 SV=2; Protein diaphanous homolog 1 OS=Mus musculus OX=10090 GN=Diaph1 PE=1 SV=1; Protein diaphanous homolog 1 OS=Mus musculus OX=10090 GN=Diaph1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Diaph1 PE=2 SV=1 0 2 2 0.3789 0 1 1 1 673.90625 1346.80522 1346.80439 0.62 0.00042 0/0 0 0 7530989 HCD 30 MS2 55.17775 787.9 110 75.3726 23154 23154 23149 QEplus033719.raw F4 1030.2 589.7 749.5 668.8 948.1 740.9 555 2.27 1 FALSE 1.14E-05 0.000261 0.777 -250 115851 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVNGVNYASVTR [R].nVNGVNYASVTR.[N] N-Term(TMT6plex) 2 Q9ES94 Cathepsin X OS=Mus musculus OX=10090 GN=Ctsz PE=2 SV=1 Q9ES94; Q9WUU7 Cathepsin X OS=Mus musculus OX=10090 GN=Ctsz PE=2 SV=1; Cathepsin Z OS=Mus musculus OX=10090 GN=Ctsz PE=1 SV=1 0 2 2 0.6615 0 1 1 1 761.91345 1522.81963 1522.81752 1.38 0.00105 0/0 0 0 4234611 HCD 30 MS2 0 324.9 110 75.3751 23155 23155 23149 QEplus033719.raw F4 323.9 297.2 379.6 282.2 344.1 322.6 362 3.9 1 FALSE 1.14E-05 5.33E-09 1.669 -250 115866 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEDGEIVSTPK [R].sEDGEIVSTPk.[L] N-Term(TMT6plex); K11(TMT6plex) 1 Q9Z0W3 Nuclear pore complex protein Nup160 OS=Mus musculus OX=10090 GN=Nup160 PE=1 SV=2 Q9Z0W3 Nuclear pore complex protein Nup160 OS=Mus musculus OX=10090 GN=Nup160 PE=1 SV=2 0 2 2 0.6964 0 1 1 1 810.44885 1619.89043 1619.88924 0.74 0.0006 0/0 0 0 3970231.5 HCD 30 MS2 0 270.3 110 75.3802 23157 23157 23149 QEplus033719.raw F4 258.9 260.4 284.3 197.3 325.8 295.3 443 3.92 1 FALSE 1.14E-05 2.65E-09 1.727 -250 115879 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIPEYCR [R].vIPEYcR.[A] N-Term(TMT6plex); C6(Carbamidomethyl) 4 Q5XJY5 Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=1 SV=2 Q8C0G7; Q5XJY5; Q8R1S6; Q3U4S9 Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1; Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=1 SV=2; Coatomer subunit delta (Fragment) OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1; Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1 0 2 2 0.4741 0 1 1 1 583.31262 1165.61797 1165.6237 -4.91 -0.00286 0/0 0 0 13193094 HCD 30 MS2 32.59894 1200.7 76.788 75.3849 23159 23159 23149 QEplus033719.raw F4 1215.7 923 1207.2 1149.2 1312.6 1396.8 214 2.32 1 FALSE 0.007381 0.1192 -0.04 -250 115888 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNKDDIQK [K].vNkDDIQk.[M] N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex) 5 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 F2Z494; Q14B05; Q8VDD5; Q8BIE2; Q8BIM8 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=1; Myh9 protein OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1 1 3 3 0.3973 0 1 1 1 549.67352 1647.00602 1647.00443 0.96 0.00053 0/0 0 0 80549392 HCD 30 MS2 7.803235 1052.7 17.982 75.3922 23161 23161 23160 QEplus033719.raw F4 939.3 991.8 1163 816.5 1398.5 1007 376 2.24 1 FALSE 0.0001603 0.003718 0.535 -250 115896 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KRLDELK [K].kRLDELk.[R] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 1 Q06185 "ATP synthase subunit e, mitochondrial OS=Mus musculus OX=10090 GN=Atp5me PE=1 SV=2" Q06185 "ATP synthase subunit e, mitochondrial OS=Mus musculus OX=10090 GN=Atp5me PE=1 SV=2" 2 4 4 0.0833 0 1 1 1 398.0145 1589.03615 1589.03534 0.51 0.0002 0/0 0 0 13951984 HCD 30 MS2 19.35155 859.4 109.307 75.3947 23162 23162 23160 QEplus033719.raw F4 808 829.4 984.6 987.6 589.7 957.3 244 2.28 1 FALSE 0.006593 0.105 -0.007 -250 115904 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHLENDPGSNEDADIPK [K].qHLENDPGSNEDADIPk.[G] N-Term(TMT6plex); K17(TMT6plex) 7 A0A498WGD8 Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=1 A0A498WGD8; Q3UNH3; A0A494B955; Q3UBF4; Q3U8R9; A0A494BBI1; Q8CDN6 Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=1; PITH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Txnl1 PE=2 SV=1; Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=1; PITH domain-containing protein OS=Mus musculus OX=10090 GN=Txnl1 PE=2 SV=1; PITH domain-containing protein OS=Mus musculus OX=10090 GN=Txnl1 PE=2 SV=1; Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=1; Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3 0 3 3 0.8674 0 1 1 1 779.729 2337.17246 2337.17229 0.07 0.00006 0/0 0 0 11527772 HCD 30 MS2 15.66108 477.5 110 75.4017 23165 23165 23160 QEplus033719.raw F4 470.7 447.9 554.4 358.7 581 452 228 6.26 1 FALSE 1.14E-05 6.31E-16 3.97 -250 115910 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGGTSDVEVNEK [K].vGGTSDVEVNEk.[K] N-Term(TMT6plex); K12(TMT6plex) 2 P63038 "60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" P63038-2; P63038 "Isoform 2 of 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1; 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" 0 2 2 0.7133 0 1 1 1 846.46289 1691.9185 1691.9216 -1.83 -0.00155 0/0 0 0 4754489.5 HCD 30 MS2 0 508.4 110 75.4042 23166 23166 23160 QEplus033719.raw F4 545.2 480.1 605 382 511.4 526.4 393 4.22 1 FALSE 1.14E-05 1.55E-09 1.771 -250 115916 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLQEIQQAGER [R].nLQEIQQAGER.[L] N-Term(TMT6plex) 1 Q8BJ71 Nuclear pore complex protein Nup93 OS=Mus musculus OX=10090 GN=Nup93 PE=1 SV=1 Q8BJ71 Nuclear pore complex protein Nup93 OS=Mus musculus OX=10090 GN=Nup93 PE=1 SV=1 0 2 2 0.4027 0 1 1 1 757.91095 1514.81462 1514.81244 1.44 0.00109 0/0 0 0 11294966 HCD 30 MS2 10.91339 453.3 110 75.4068 23167 23167 23160 QEplus033719.raw F4 472.3 408.9 494.9 356.1 532.5 455.4 343 3.75 1 FALSE 1.14E-05 6.42E-10 1.844 -250 115922 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVEIMEEESEQ [R].rVEIMEEESEQ.[-] N-Term(TMT6plex) 4 E9PYI8 Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp14 PE=1 SV=1 E9PYI8; Q9JMA1; Q3TC32; Q80UN0 Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp14 PE=1 SV=1; Ubiquitin carboxyl-terminal hydrolase 14 OS=Mus musculus OX=10090 GN=Usp14 PE=1 SV=3; USP domain-containing protein OS=Mus musculus OX=10090 GN=Usp14 PE=2 SV=1; Ubiquitin carboxyl-terminal hydrolase OS=Mus musculus OX=10090 GN=Usp14 PE=2 SV=1 1 2 2 0.8368 0 1 1 1 804.39252 1607.77776 1607.77842 -0.41 -0.00033 0/0 0 0 8120242 HCD 30 MS2 0 187.5 110 75.4093 23168 23168 23160 QEplus033719.raw F4 168.3 157.8 223.8 152.8 203.3 218.7 111 3.37 1 FALSE 1.14E-05 0.0001269 0.837 -250 115931 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIPVYECER [K].nIPVYEcER.[S] N-Term(TMT6plex); C7(Carbamidomethyl) 1 Q9WTX2 Interferon-inducible double-stranded RNA-dependent protein kinase activator A OS=Mus musculus OX=10090 GN=Prkra PE=1 SV=1 Q9WTX2 Interferon-inducible double-stranded RNA-dependent protein kinase activator A OS=Mus musculus OX=10090 GN=Prkra PE=1 SV=1 0 2 2 0.7203 0 1 1 1 704.8595 1408.71172 1408.70922 1.78 0.00125 0/0 0 0 7375036 HCD 30 MS2 46.87695 736.1 110 75.4118 23169 23169 23160 QEplus033719.raw F4 736.1 684.1 825.8 566.2 869.5 735 136 2.61 1 FALSE 1.14E-05 8.04E-05 0.875 -250 115937 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QHLENDPGSNEDADIPK [K].qHLENDPGSNEDADIPk.[G] N-Term(TMT6plex); K17(TMT6plex) 7 A0A498WGD8 Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=1 A0A498WGD8; Q3UNH3; A0A494B955; Q3UBF4; Q3U8R9; A0A494BBI1; Q8CDN6 Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=1; PITH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Txnl1 PE=2 SV=1; Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=1; PITH domain-containing protein OS=Mus musculus OX=10090 GN=Txnl1 PE=2 SV=1; PITH domain-containing protein OS=Mus musculus OX=10090 GN=Txnl1 PE=2 SV=1; Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=1; Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3 0 4 4 0.7523 0 1 1 1 585.04913 2337.1747 2337.17229 1.03 0.0006 0/0 0 0 7253038 HCD 30 MS2 18.22312 645.7 110 75.4143 23170 23170 23160 QEplus033719.raw F4 627 538.9 681.3 559.7 720.1 746.9 242 4.28 1 FALSE 1.14E-05 5.91E-08 1.471 -250 115961 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LIEYCHSK [K].lIEYcHSk.[G] N-Term(TMT6plex); C5(Carbamidomethyl); K8(TMT6plex) 3 Q3UDY1 Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1 Q3TCL2; Q3UDY1; Q5U415 "Aldo_ket_red domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1; Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1; Aldo-keto reductase family 1, member B3 (Aldose reductase) OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1" 0 3 3 0.6797 0 1 1 1 503.28296 1507.83432 1507.83431 0.01 0.00001 0/0 0 0 50856016 HCD 30 MS2 6.051697 885.5 30.437 75.4264 23174 23174 23171 QEplus033719.raw F4 897.5 553 937.2 958.2 760.3 1206.5 401 4.09 1 FALSE 1.14E-05 2.81E-05 0.962 -250 115969 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYIPGTK [K].kYIPGTk.[MT] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 4 P62897 "Cytochrome c, somatic OS=Mus musculus OX=10090 GN=Cycs PE=1 SV=2" P00015; P62897; Q6PBG3; P62894 "Cytochrome c, testis-specific OS=Mus musculus OX=10090 GN=Cyct PE=1 SV=3; Cytochrome c, somatic OS=Mus musculus OX=10090 GN=Cycs PE=1 SV=2; Cytochrome c, testis OS=Mus musculus OX=10090 GN=Cyct PE=2 SV=1; SWISS-PROT:P62894 Cytochrome c - Bos taurus (Bovine)." 1 3 3 0.2154 0 1 1 1 498.65985 1493.965 1493.96586 -0.58 -0.00029 0/0 0 0 17914388 HCD 30 MS2 15.41542 1361.3 52.372 75.4286 23175 23175 23171 QEplus033719.raw F4 1438.3 1113.1 1373.8 1321.6 1416.2 1505.1 168 3.11 1 TRUE 0.001083 0.01398 0.346 -250 115979 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DCEDPNPLIR [K].dcEDPNPLIR.[A] N-Term(TMT6plex); C2(Carbamidomethyl) 9 Q5SWR1; Q5SVG5 AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=2 SV=1;AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=1 Q8CC13; Q5SWR1; Q5SVG5; O35643; H3BIY9; Q5SVG4; Q9DBG3; Q3TVN4; H3BJ06 AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=2 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=2 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=1; AP-1 complex subunit beta-1 OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=2; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=1 SV=1; AP-2 complex subunit beta OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1; AP complex subunit beta OS=Mus musculus OX=10090 GN=Ap1b1 PE=2 SV=1; AP-2 complex subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Ap2b1 PE=1 SV=1 0 2 2 0.7273 0 1 1 1 729.36438 1457.72148 1457.72559 -2.82 -0.00206 0/0 0 0 14914045 HCD 30 MS2 29.96597 545.3 110 75.4312 23176 23176 23171 QEplus033719.raw F4 542.2 448.9 579.6 470.4 613.8 616.8 110 3.08 2 FALSE 1.14E-05 2.12E-05 0.985 -250 115987 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NFTDVHPDYGAR [K].nFTDVHPDYGAR.[I] N-Term(TMT6plex) 8 Q3TVZ1 Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1 A2AL20; Q8C6E3; P24270; Q3UF58; Q91XI2; Q3UZE7; Q3TVZ1; Q542K4 Catalase OS=Mus musculus OX=10090 GN=Cat PE=1 SV=1; Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1; Catalase OS=Mus musculus OX=10090 GN=Cat PE=1 SV=4; Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1; Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1; Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1; Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1; Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1 0 3 3 0.7085 0 1 1 1 540.93896 1620.80234 1620.79679 3.43 0.00185 0/0 0 0 8113773 HCD 30 MS2 48.50136 1250.3 110 75.4337 23177 23177 23171 QEplus033719.raw F4 1249.7 777.5 1150.4 1511.8 1096.7 1715.7 137 2.95 1 FALSE 1.14E-05 1.42E-05 1.018 -250 115993 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGGTSDVEVNEK [K].vGGTSDVEVNEk.[K] N-Term(TMT6plex); K12(TMT6plex) 2 P63038 "60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" P63038-2; P63038 "Isoform 2 of 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1; 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" 0 3 3 0.7118 0 1 1 1 564.64581 1691.92289 1691.9216 0.76 0.00043 0/0 0 0 22395008 HCD 30 MS2 9.285321 799.6 62.288 75.4359 23178 23178 23171 QEplus033719.raw F4 832.5 648.6 841.6 805.1 746.9 923.2 384 3.47 1 FALSE 1.14E-05 7.78E-07 1.258 -250 115997 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGTLTTNQMSVCR [K].tGTLTTNQMSVcR.[M] N-Term(TMT6plex); C12(Carbamidomethyl) 12 O55143-2; O55143 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2 E9Q559; B1ATS5; Q64518-3; Q64518; O55143-2; Q8C213; Q64518-1; B1ATS4; O55143; Q5DTI2; Q3U1K2; O54994 Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=1; Isoform SERCA3C of Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus OX=10090 GN=Atp2a3; Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=4; Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a3 PE=2 SV=1; Isoform SERCA3B of Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus OX=10090 GN=Atp2a3; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a3 PE=2 SV=1; Sarcoplasmic reticulum Ca2+-ATPase (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1 0 2 2 0.7427 0 1 1 1 849.43011 1697.85295 1697.85121 1.03 0.00087 0/0 0 0 13490309 HCD 30 MS2 9.989872 485.9 110 75.4385 23179 23179 23171 QEplus033719.raw F4 530.6 210.8 426.8 817.3 274.6 655.1 198 4.82 2 FALSE 1.14E-05 6.25E-12 2.226 -250 116013 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYSSGFGGK [K].dYSSGFGGk.[Y] N-Term(TMT6plex); K9(TMT6plex) 3 Q60598 Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2 Q8BNA5; Q60598; Q921L6 SH3 domain-containing protein OS=Mus musculus OX=10090 GN=Cttn PE=2 SV=1; Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2; Cttn protein OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=1 0 2 2 0.5828 0 1 1 1 688.36591 1375.72453 1375.7258 -0.92 -0.00063 0/0 0 0 8497056 HCD 30 MS2 10.07389 1004.5 110 75.4435 23181 23181 23171 QEplus033719.raw F4 1067.2 859.8 1104.2 875.8 1105.9 1014.4 275 3.14 1 FALSE 1.14E-05 4.88E-06 1.107 -250 116025 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LIEYCHSK [K].lIEYcHSk.[G] N-Term(TMT6plex); C5(Carbamidomethyl); K8(TMT6plex) 3 Q3UDY1 Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1 Q3TCL2; Q3UDY1; Q5U415 "Aldo_ket_red domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1; Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1; Aldo-keto reductase family 1, member B3 (Aldose reductase) OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1" 0 2 2 0.6498 0 1 1 1 754.42377 1507.84026 1507.83431 3.95 0.00298 0/0 0 0 4145781.75 HCD 30 MS2 13.32534 110 75.4533 23184 23184 23182 QEplus033719.raw F4 415 3.17 1 FALSE 1.14E-05 0.0007594 0.686 -250 116034 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQLILAR [K].qQLILAR.[D] N-Term(TMT6plex) 7 Q9CX56 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=1 SV=2 Q9CX56; Q3TG45; Q99JB5; Q3TW90; Q9CPS5; Q8BKP5; Q3TVY0 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=1 SV=2; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=1 SV=2; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 8 OS=Mus musculus OX=10090 GN=Psmd8 PE=2 SV=1 0 2 2 0.141 0 1 1 1 535.849 1070.69072 1070.68834 2.22 0.00119 0/0 0 0 21658364 HCD 30 MS2 9.249952 1242.6 93.124 75.4579 23186 23186 23182 QEplus033719.raw F4 1528 939.1 1248.5 1111.2 1316 1312.6 86 2.34 1 FALSE 0.001117 0.01477 0.336 -250 116044 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QRELAEQELEK [R].qRELAEQELEk.[Q] N-Term(TMT6plex); K11(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.4594 0 1 1 1 611.01672 1831.03562 1831.03255 1.68 0.00102 0/0 0 0 19334018 HCD 30 MS2 36.18248 1414 86.931 75.4601 23187 23187 23182 QEplus033719.raw F4 1579.9 1212.8 1591.3 1169.4 1454.4 1475.9 457 3.57 2 FALSE 1.14E-05 1.97E-08 1.561 -250 116050 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VMSQNFTNCHTK [K].vMSQNFTNcHTk.[I] N-Term(TMT6plex); C9(Carbamidomethyl); K12(TMT6plex) 3 Q571F9 MKIAA4115 protein (Fragment) OS=Mus musculus OX=10090 GN=G3bp1 PE=2 SV=1 Q571F9; Q3UR88; P97855 MKIAA4115 protein (Fragment) OS=Mus musculus OX=10090 GN=G3bp1 PE=2 SV=1; NTF2 domain-containing protein OS=Mus musculus OX=10090 GN=G3bp1 PE=2 SV=1; Ras GTPase-activating protein-binding protein 1 OS=Mus musculus OX=10090 GN=G3bp1 PE=1 SV=1 0 3 3 0.7581 0 1 1 1 642.33014 1924.97586 1924.97736 -0.78 -0.0005 0/0 0 0 19168724 HCD 30 MS2 4.999752 836.2 110 75.4626 23188 23188 23182 QEplus033719.raw F4 947.1 751.7 876 654.8 1047.1 740.7 228 6.16 1 FALSE 1.14E-05 1.05E-15 2.942 -250 116065 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QASEENTDVETVMR [K].qASEENTDVETVMR.[K] N-Term(TMT6plex) 6 E9Q3Z5 Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1 E9Q3Z5; E3VVQ8; Q8K4L2; Q8K4L3; Q8K4L3-3; A0A1B0GS91 Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin muscle-specific isoform OS=Mus musculus OX=10090 GN=Svil PE=2 SV=1; Archvillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1; Isoform 2 of Supervillin OS=Mus musculus OX=10090 GN=Svil; Supervillin OS=Mus musculus OX=10090 GN=Svil PE=1 SV=1 0 2 2 0.7651 0 1 1 1 919.44586 1837.88445 1837.87992 2.46 0.00226 0/0 0 0 3281058.5 HCD 30 MS2 26.26213 215.9 110 75.4677 23190 23190 23182 QEplus033719.raw F4 212.7 179.7 269.3 208.6 197.2 227.9 118 4.13 1 FALSE 1.14E-05 2.72E-13 2.484 -250 116074 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTQNDVLHAENVK [K].kTQNDVLHAENVk.[A] N-Term(TMT6plex); K1(TMT6plex); K13(TMT6plex) 6 P26043 Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3 Q3TS74; P26043; Q3TH46; Q3U111; A0A5F8MPB9; Q3UJJ8 ERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=3; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1; Radixin OS=Mus musculus OX=10090 GN=Rdx PE=1 SV=1; FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rdx PE=2 SV=1 1 4 4 0.4819 0 1 1 1 546.57605 2183.28237 2183.27513 3.32 0.00181 0/0 0 0 14797162 HCD 30 MS2 44.45977 949.3 65.693 75.4722 23192 23192 23182 QEplus033719.raw F4 1022.2 730.3 975 808.3 1017.3 1142.7 347 3.86 1 FALSE 1.14E-05 7.72E-07 1.259 -250 116081 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANMDGLK [R].aNMDGLk.[K] N-Term(TMT6plex); K7(TMT6plex) 1 P16254 Signal recognition particle 14 kDa protein OS=Mus musculus OX=10090 GN=Srp14 PE=1 SV=1 P16254 Signal recognition particle 14 kDa protein OS=Mus musculus OX=10090 GN=Srp14 PE=1 SV=1 0 2 2 0.3991 0 1 1 1 603.84967 1206.69206 1206.69166 0.33 0.0002 0/0 0 0 15590796 HCD 30 MS2 54.29445 1692.7 110 75.482 23195 23195 23193 QEplus033719.raw F4 1645.4 1502 1834.4 1468.4 1866.2 1839.5 424 2.33 1 FALSE 0.0002719 0.005539 0.489 -250 116090 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALELEQERK [R].aLELEQERk.[R] N-Term(TMT6plex); K9(TMT6plex) 3 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4; Q3TZQ2 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 1 3 3 0.2139 0 1 1 1 525.31525 1573.93119 1573.93138 -0.12 -0.00006 0/0 0 0 49441984 HCD 30 MS2 40.62534 1151 21.032 75.4843 23196 23196 23193 QEplus033719.raw F4 1234.4 1027.6 1197.3 813.9 1503 1129.9 459 3.74 1 FALSE 1.14E-05 1.02E-06 1.236 -250 116104 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTQDQISNIK [K].kTQDQISNIk.[Y] N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex) 6 Q543N3 LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 A2A6H0; A2A6G8; Q543N3; A2A6G7; A2A6G6; A2A6G9 LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=8; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 1 3 3 0.6887 0 1 1 1 621.38269 1862.13352 1862.13142 1.13 0.0007 0/0 0 0 46104308 HCD 30 MS2 32.51913 1220.6 36.142 75.4888 23198 23198 23193 QEplus033719.raw F4 1222.5 1298.7 1388.1 840.2 1450.8 1123.3 342 4.08 1 FALSE 1.14E-05 5.19E-09 1.671 -250 116112 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RAALQALK [K].rAALQALk.[R] N-Term(TMT6plex); K8(TMT6plex) 3 Q9D8B3 Charged multivesicular body protein 4b OS=Mus musculus OX=10090 GN=Chmp4b PE=1 SV=2 Q9D8B3; Q3TLQ5; Q9D7F7 Charged multivesicular body protein 4b OS=Mus musculus OX=10090 GN=Chmp4b PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Chmp4c PE=2 SV=1; Charged multivesicular body protein 4c OS=Mus musculus OX=10090 GN=Chmp4c PE=2 SV=1 1 3 3 0.4062 0 1 1 1 443.63071 1328.87757 1328.87783 -0.19 -0.00009 0/0 0 0 16222993 HCD 30 MS2 23.27491 749 67.671 75.4911 23199 23199 23193 QEplus033719.raw F4 791.4 599.8 746.2 550.7 901.9 903.8 175 3.89 1 FALSE 1.14E-05 6.75E-05 0.89 -250 116121 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLQLAIR [R].hLQLAIR.[NG] N-Term(TMT6plex) 17 Q149V4; Q8BFU2; Q3THW5; P27661 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1;Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3;Histone H2A.V OS=Mus musculus OX=10090 GN=H2az2 PE=1 SV=3;Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 Q149V4; Q8BFU2; Q3THW5; C0HKE5; P0C0S6; Q8CGP5; A0AUV1; Q8CGP4; Q3TFU6; Q8R1M2; Q8R029; P27661; A0A0N4SV66; Q64426; Q8CGP7; Q8CGP6; Q6GSS7 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1; Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3; Histone H2A.V OS=Mus musculus OX=10090 GN=H2az2 PE=1 SV=3; Histone H2A type 1-G OS=Mus musculus OX=10090 GN=H2ac11 PE=1 SV=1; Histone H2A.Z OS=Mus musculus OX=10090 GN=H2az1 PE=1 SV=2; Histone H2A type 1-F OS=Mus musculus OX=10090 GN=Hist1h2af PE=1 SV=3; Histone H2A (Fragment) OS=Mus musculus OX=10090 GN=H2ac12 PE=2 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2ac1 PE=1 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2az1 PE=2 SV=1; Histone H2A.J OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2az2 PE=2 SV=1; Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2; Histone H2A OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A (Fragment) OS=Mus musculus domesticus OX=10092 GN=H2A PE=2 SV=1; Histone H2A type 1-K OS=Mus musculus OX=10090 GN=H2ac15 PE=1 SV=3; Histone H2A type 1-H OS=Mus musculus OX=10090 GN=H2ac12 PE=1 SV=3; Histone H2A type 2-A OS=Mus musculus OX=10090 GN=Hist2h2aa1 PE=1 SV=3 0 3 3 0.183 0 1 1 1 360.56769 1079.68851 1079.68868 -0.16 -0.00006 0/0 0 0 14428502 HCD 30 MS2 5.819959 422.9 110 75.4936 23200 23200 23193 QEplus033719.raw F4 440.5 447.4 528.1 271.8 463.1 386.4 16 3.17 4 FALSE 0.0002518 0.005238 0.496 -250 116131 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QEVENFK [K].qEVENFk.[K] N-Term(TMT6plex); K7(TMT6plex) 3 Z4YJT3 La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1 PE=1 SV=1 Q3UU34; Z4YJT3; Q6ZQ58 HTH La-type RNA-binding domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Larp1 PE=2 SV=1; La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1 PE=1 SV=1; La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1 PE=1 SV=3 0 2 2 0.4688 0 1 1 1 676.38361 1351.75994 1351.76219 -1.67 -0.00113 0/0 0 0 3836851.75 HCD 30 MS2 38.58776 627.9 110 75.4986 23202 23202 23193 QEplus033719.raw F4 642 515.1 642.5 554.3 688.7 725 383 3.2 1 FALSE 0.0002419 0.004942 0.503 -250 116144 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPVEPEVAIHR [K].tPVEPEVAIHR.[I] N-Term(TMT6plex) 1 Q5BLK2 40S ribosomal protein S20 OS=Mus musculus OX=10090 GN=Rps20 PE=1 SV=1 Q5BLK2 40S ribosomal protein S20 OS=Mus musculus OX=10090 GN=Rps20 PE=1 SV=1 0 3 3 0.6527 0 1 1 1 492.95074 1476.83768 1476.83719 0.33 0.00016 0/0 0 0 78091864 HCD 30 MS2 15.90707 435.2 20.084 75.5081 23205 23205 23204 QEplus033719.raw F4 529.4 280.6 418.1 362.1 505.1 515.7 520 4.78 1 FALSE 1.14E-05 1.33E-07 1.404 -250 116158 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KIDPNMK [K].kIDPNMk.[A] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 2 Q8R1Q8 Cytoplasmic dynein 1 light intermediate chain 1 OS=Mus musculus OX=10090 GN=Dync1li1 PE=1 SV=1 Q3TVT4; Q8R1Q8 Dynein light intermediate chain (Fragment) OS=Mus musculus OX=10090 GN=Dync1li1 PE=2 SV=1; Cytoplasmic dynein 1 light intermediate chain 1 OS=Mus musculus OX=10090 GN=Dync1li1 PE=1 SV=1 1 3 3 0.4772 0 1 1 1 511.6532 1532.94504 1532.94375 0.85 0.00043 0/0 0 0 32010708 HCD 30 MS2 47.06608 1218.3 28.456 75.5126 23207 23207 23204 QEplus033719.raw F4 1238 951.4 1281.4 1075.7 1365.4 1397.7 313 2.85 1 FALSE 0.001877 0.03174 0.208 -250 116190 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSKLPVAQSQK [K].dSkLPVAQSQk.[T] N-Term(TMT6plex); K3(TMT6plex); K11(TMT6plex) 15 Q8CAQ8; A0A0U1RP81 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1;MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q8CAQ8-4; Q3U7N2; E9PVS5; Q8CAQ8; E9QAY6; Q8CAQ8-2; Q3TZK4; A0A0U1RP81; Q3TVZ5; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5; A0A1B0GX08 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; Isoform 4 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 1 3 3 0.677 0 1 1 1 630.05487 1888.15006 1888.14707 1.58 0.001 0/0 0 0 11169351 HCD 30 MS2 31.58661 1122.3 110 75.5222 23211 23211 23204 QEplus033719.raw F4 1154.7 1019.5 1243.2 1035.9 1132.6 1148.1 268 4.18 2 FALSE 1.14E-05 1.62E-08 1.577 -250 116197 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FETVHQIHK [K].fETVHQIHk.[Q] N-Term(TMT6plex); K9(TMT6plex) 4 Q542P4 55 kDa erythrocyte membrane protein OS=Mus musculus OX=10090 GN=Mpp1 PE=1 SV=1 Q542P4; Q684Q6; A2AN84; B7ZCL8 55 kDa erythrocyte membrane protein OS=Mus musculus OX=10090 GN=Mpp1 PE=1 SV=1; 55 kDa erythrocyte membrane protein (Fragment) OS=Mus musculus OX=10090 GN=Mpp1 PE=2 SV=1; 55 kDa erythrocyte membrane protein OS=Mus musculus OX=10090 GN=Mpp1 PE=1 SV=1; 55 kDa erythrocyte membrane protein OS=Mus musculus OX=10090 GN=Mpp1 PE=1 SV=1 0 4 4 0.4652 0 1 1 1 399.9873 1596.92739 1596.92623 0.72 0.00029 0/0 0 0 9502310 HCD 30 MS2 22.30788 457.6 103.249 75.5246 23212 23212 23204 QEplus033719.raw F4 412.2 427.7 572.7 316.5 489.6 526.7 387 4.45 1 FALSE 1.14E-05 1.44E-05 1.017 -250 116203 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAEVELQSK [R].sAEVELQSk.[R] N-Term(TMT6plex); K9(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.6466 0 1 1 1 724.92468 1448.84209 1448.83608 4.15 0.003 0/0 0 0 5657077.5 HCD 30 MS2 0 718.5 110 75.5271 23213 23213 23204 QEplus033719.raw F4 802.2 610.4 796.3 571.1 773.8 757.1 482 3.82 2 FALSE 1.14E-05 8.07E-07 1.255 -250 116217 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IIAPPERK [KR].iIAPPERk.[Y] N-Term(TMT6plex); K8(TMT6plex) 32 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q8BFZ3; Q3TG92; P63268; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61275; Q3UAF6; Q3U122; E9Q1F2; Q3UAA9; B2RRX1; Q61272; Q3U5R4; Q3UAF7; Q99NC5; Q3TIJ9; P62737; P68134; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P68033; P63260; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 1 3 3 0.5325 0 1 1 1 461.30292 1381.8942 1381.89314 0.77 0.00035 0/0 0 0 916732736 HCD 30 MS2 17.07137 799.4 1.899 75.5369 23216 23216 23215 QEplus033719.raw F4 787.7 596.9 901.8 683.8 999.4 827 56 3.08 4 FALSE 0.001591 0.02489 0.245 -250 116231 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ARADDELAALR [R].aRADDELAALR.[V] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 1 3 3 0.6425 0 1 1 1 477.27063 1429.79734 1429.79606 0.89 0.00043 0/0 0 0 94701816 HCD 30 MS2 12.31814 470.4 17.29 75.5414 23218 23218 23215 QEplus033719.raw F4 529.5 287.9 549.6 433.5 373.6 648.1 381 5.37 1 FALSE 1.14E-05 2.16E-10 1.934 -250 116239 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRVELSNGEK [R].vRVELSNGEk.[R] N-Term(TMT6plex); K10(TMT6plex) 3 P84104 Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3 PE=1 SV=1 P84104-2; P84104; Q9D6W4 Isoform Short of Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3; Serine/arginine-rich splicing factor 3 OS=Mus musculus OX=10090 GN=Srsf3 PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Srsf3 PE=2 SV=1 1 3 3 0.6356 0 1 1 1 530.31927 1588.94327 1588.94228 0.63 0.00033 0/0 0 0 68124744 HCD 30 MS2 22.03752 926.2 25.291 75.5436 23219 23219 23215 QEplus033719.raw F4 927 909.8 1164.6 680 861.6 1014.1 425 4.72 1 FALSE 1.14E-05 2.15E-07 1.364 -250 116247 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLPFQR [R].kLPFQR.[L] N-Term(TMT6plex); K1(TMT6plex) 9 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; E0CZ27; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 1 3 3 0.1592 0 1 1 1 416.27271 1246.80356 1246.8036 -0.03 -0.00001 0/0 0 0 39020048 HCD 30 MS2 42.64547 838.4 24.504 75.5459 23220 23220 23215 QEplus033719.raw F4 786.4 970.8 908.9 544.6 1103.1 716.5 220 2.01 2 FALSE 0.007846 0.1292 -0.058 -250 116274 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTQDQISNIK [K].kTQDQISNIk.[Y] N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex) 6 Q543N3 LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 A2A6H0; A2A6G8; Q543N3; A2A6G7; A2A6G6; A2A6G9 LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=8; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 1 4 4 0.5857 0 1 1 1 466.28827 1862.13125 1862.13142 -0.09 -0.00004 0/0 0 0 10389310 HCD 30 MS2 15.50971 812.3 110 75.5529 23223 23223 23215 QEplus033719.raw F4 809.2 798.3 894.9 619.8 969.3 782.6 316 3.91 1 FALSE 1.14E-05 3.27E-05 0.949 -250 116278 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYIPGTK [K].kYIPGTk.[MT] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 4 P62897 "Cytochrome c, somatic OS=Mus musculus OX=10090 GN=Cycs PE=1 SV=2" P00015; P62897; Q6PBG3; P62894 "Cytochrome c, testis-specific OS=Mus musculus OX=10090 GN=Cyct PE=1 SV=3; Cytochrome c, somatic OS=Mus musculus OX=10090 GN=Cycs PE=1 SV=2; Cytochrome c, testis OS=Mus musculus OX=10090 GN=Cyct PE=2 SV=1; SWISS-PROT:P62894 Cytochrome c - Bos taurus (Bovine)." 1 2 2 0.2513 0 1 1 1 747.48657 1493.96587 1493.96586 0 0 0/0 0 0 7818267.5 HCD 30 MS2 49.89572 659.7 110 75.5554 23224 23224 23215 QEplus033719.raw F4 687.7 533.8 708.5 592.5 693.6 742.2 156 1.99 1 TRUE 0.005512 0.09344 0.025 -250 116288 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAATSGAGSTTSGVVSGSLGSR [R].sAATSGAGSTTSGVVSGSLGSR.[E] N-Term(TMT6plex) 6 Q4JG03 HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1 Q7TMY8-4; Q4JG03; Q7TMY8-3; Q7TMY8; Q7TMY8-2; A2AFQ0 Isoform 4 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=2 SV=1; Isoform 3 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=5; Isoform 2 of E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=1 0 3 3 0.7617 0 1 1 1 709.3692 2126.09305 2126.08867 2.06 0.00146 0/0 0 0 4834421 HCD 30 MS2 0 186.2 110 75.5579 23225 23225 23215 QEplus033719.raw F4 179.7 155.9 203.8 157.9 223.1 196.8 307 6.21 1 FALSE 1.14E-05 2.74E-15 2.863 -250 116302 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQASIEK [K].mQASIEk.[GAF] N-Term(TMT6plex); K7(TMT6plex) 7 Q5SQB7 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1 Q5SQB7; Q5SQB0; Q5BL09; Q5U438; Q9DAY9; Q5SQB5; Q3U536 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Npm1 protein OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1 0 2 2 0.3108 0 1 1 1 632.8703 1264.73332 1264.73353 -0.16 -0.0001 0/0 0 0 70734832 HCD 30 MS2 15.76048 965.8 21.992 75.5675 23228 23228 23226 QEplus033719.raw F4 890 967.5 1108.3 679.7 1186.2 962.9 475 2.96 1 FALSE 0.0008183 0.01117 0.386 -250 116321 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGTLTTNQMSVCR [K].tGTLTTNQMSVcR.[M] N-Term(TMT6plex); C12(Carbamidomethyl) 12 O55143-2; O55143 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2 E9Q559; B1ATS5; Q64518-3; Q64518; O55143-2; Q8C213; Q64518-1; B1ATS4; O55143; Q5DTI2; Q3U1K2; O54994 Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=1; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=1; Isoform SERCA3C of Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus OX=10090 GN=Atp2a3; Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=4; Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a3 PE=2 SV=1; Isoform SERCA3B of Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Mus musculus OX=10090 GN=Atp2a3; Calcium-transporting ATPase OS=Mus musculus OX=10090 GN=Atp2a3 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a3 PE=2 SV=1; Sarcoplasmic reticulum Ca2+-ATPase (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1 0 3 3 0.7588 0 1 1 1 566.62262 1697.85331 1697.85121 1.24 0.0007 0/0 0 0 41711816 HCD 30 MS2 8.821693 459 48.921 75.572 23230 23230 23226 QEplus033719.raw F4 475.8 361.9 463.9 479.3 466.8 506.4 196 5.39 2 FALSE 1.14E-05 1.15E-07 1.416 -250 116324 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYEITK [K].kYEITk.[H] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 3 Q6PIP5 NudC domain-containing protein 1 OS=Mus musculus OX=10090 GN=Nudcd1 PE=1 SV=2 Q8BJK0; Q6PIP5; A0A2K6EDK3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nudcd1 PE=2 SV=1; NudC domain-containing protein 1 OS=Mus musculus OX=10090 GN=Nudcd1 PE=1 SV=2; NudC domain-containing protein 1 OS=Mus musculus OX=10090 GN=Nudcd1 PE=1 SV=1 1 3 3 0.056 0 1 1 1 490.31699 1468.9364 1468.93423 1.48 0.00073 0/0 0 0 32849408 HCD 30 MS2 56.49243 1108.2 32.395 75.5743 23231 23231 23226 QEplus033719.raw F4 1261.7 931.7 1136.9 912.5 1299.7 1106.6 127 2.32 1 FALSE 0.002071 0.03839 0.18 -250 116330 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMEAVAAQGK [K].aMEAVAAQGk.[VA] N-Term(TMT6plex); K10(TMT6plex) 3 Q3U7Z6; Q5NCI4 Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam1 PE=1 SV=1;Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam2 PE=1 SV=1 Q3U7Z6; Q6NWV5; Q5NCI4 Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam1 PE=1 SV=1; Pgam1 protein (Fragment) OS=Mus musculus OX=10090 GN=Pgam1 PE=2 SV=1; Phosphoglycerate mutase OS=Mus musculus OX=10090 GN=Pgam2 PE=1 SV=1 0 2 2 0.6886 0 1 1 1 717.41321 1433.81914 1433.81866 0.34 0.00024 0/0 0 0 31452036 HCD 30 MS2 13.65019 723.4 49.13 75.5766 23232 23232 23226 QEplus033719.raw F4 710.6 508.2 719.7 833.6 724.4 843.7 490 4.11 2 FALSE 1.14E-05 9.42E-08 1.432 -250 116337 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQLEEFR [K].dQLEEFR.[E] N-Term(TMT6plex) 1 Q8CI43 Myosin light chain 6B OS=Mus musculus OX=10090 GN=Myl6b PE=1 SV=1 Q8CI43 Myosin light chain 6B OS=Mus musculus OX=10090 GN=Myl6b PE=1 SV=1 0 2 2 0.5656 0 1 1 1 583.30621 1165.60515 1165.60507 0.07 0.00004 0/0 0 0 28538410 HCD 30 MS2 11.10769 1146.7 70.917 75.5788 23233 23233 23226 QEplus033719.raw F4 1257.3 550.4 969.9 1601.5 947.3 1553.7 214 2.44 1 FALSE 0.0007151 0.01035 0.399 -250 116342 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EESREPAPESPKPAGVEIR [R].eESREPAPESPkPAGVEIR.[S] N-Term(TMT6plex); K12(TMT6plex) 2 E9PWE8 Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1 E9PWE8; Q71H74 Dihydropyrimidinase-related protein 3 OS=Mus musculus OX=10090 GN=Dpysl3 PE=1 SV=1; Collapsin response mediator protein 4A (Fragment) OS=Mus musculus OX=10090 GN=Dpysl3 PE=2 SV=1 1 4 4 0.6494 0 1 1 1 634.85114 2536.38271 2536.37714 2.2 0.00139 0/0 0 0 16543410 HCD 30 MS2 21.45653 886.3 110 75.5836 23235 23235 23226 QEplus033719.raw F4 854 751.6 1008.7 712.3 1069.2 922 464 3.85 1 FALSE 1.14E-05 2.26E-09 1.74 -250 116349 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVGGTTPGK [K].lVGGTTPGk.[G] N-Term(TMT6plex); K9(TMT6plex) 1 Q9WUM5 "Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Suclg1 PE=1 SV=4" Q9WUM5 "Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Suclg1 PE=1 SV=4" 0 2 2 0.4556 0 1 1 1 644.40558 1287.80388 1287.80366 0.17 0.00011 0/0 0 0 15460732 HCD 30 MS2 13.61879 1172.9 110 75.5861 23236 23236 23226 QEplus033719.raw F4 1333.1 908.3 1235.3 1258.1 984.3 1318.3 500 2.48 1 FALSE 1.14E-05 7.19E-05 0.884 -250 116359 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELGPYSSK [K].eLGPYSSk.[T] N-Term(TMT6plex); K8(TMT6plex) 4 O08529 Calpain-2 catalytic subunit OS=Mus musculus OX=10090 GN=Capn2 PE=1 SV=4 Q3U3A8; Q8BPV9; O08529; Q3U8S5 Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1; Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1; Calpain-2 catalytic subunit OS=Mus musculus OX=10090 GN=Capn2 PE=1 SV=4; Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1 0 2 2 0.3648 0 1 1 1 669.88733 1338.76738 1338.76694 0.33 0.00022 0/0 0 0 14888041 HCD 30 MS2 22.9812 1039 110 75.5934 23238 23238 23237 QEplus033719.raw F4 1059.2 982.3 1122 802 1258.7 1009.6 362 3.07 1 FALSE 1.14E-05 0.0002495 0.781 -250 116384 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNASTDYDLSDK [K].nNASTDYDLSDk.[S] N-Term(TMT6plex); K12(TMT6plex) 7 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB15; Q99N25; Q3UB90; Q3U9L3; Q3T9U9; P27659 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Ribosomal protein L3 (Fragment) OS=Mus musculus OX=10090 GN=Rp13 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3 0 2 2 0.8122 0 1 1 1 900.95605 1800.90483 1800.90159 1.8 0.00162 0/0 0 0 15656849 HCD 30 MS2 0 891.2 110 75.6009 23241 23241 23237 QEplus033719.raw F4 961.3 829 1044.1 748.9 881.7 882.2 192 4.58 1 FALSE 1.14E-05 4.71E-11 2.059 -250 116386 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IIAPPERK [KR].iIAPPERk.[Y] N-Term(TMT6plex); K8(TMT6plex) 32 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q8BFZ3; Q3TG92; P63268; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61275; Q3UAF6; Q3U122; E9Q1F2; Q3UAA9; B2RRX1; Q61272; Q3U5R4; Q3UAF7; Q99NC5; Q3TIJ9; P62737; P68134; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P68033; P63260; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 1 2 2 0.4664 0 1 1 1 691.45398 1381.90068 1381.89314 5.46 0.00377 0/0 0 0 15203930 HCD 30 MS2 0 759 110 75.6034 23242 23242 23237 QEplus033719.raw F4 756.8 616.5 844.8 636 880 819.9 39 2.68 4 FALSE 0.008019 0.1337 -0.065 -250 116405 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEAGSPGIPGPK [R].gEAGSPGIPGPk.[G] N-Term(TMT6plex); K12(TMT6plex) 7 Q7TT32 "Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BKY2; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8K173; Q3TVI5 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 2 2 0.6985 0 1 1 1 762.94482 1524.88237 1524.87861 2.46 0.00188 0/0 0 0 4074794.5 HCD 30 MS2 36.93962 319.8 110 75.6085 23244 23244 23237 QEplus033719.raw F4 275.4 372.4 369.6 227 314.9 359.4 396 3.98 1 FALSE 1.14E-05 4.78E-09 1.678 -250 116413 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NFYQEHPDLAR [K].nFYQEHPDLAR.[R] N-Term(TMT6plex) 11 Q5U222 DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1 B1ARC0; Q3UXW3; Q5U222; S4R1E3; Q3V0Z8; B1ARB9; O35662; A1L333; S4R1I6; Q61656; Q8BTS0 RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=8; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1; DEAD box protein 5 (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=8; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Hlr1 PE=4 SV=1; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1; Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2; DEAD box protein 5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=1 0 2 2 0.7206 0 1 1 1 809.91254 1618.8178 1618.81752 0.17 0.00014 0/0 0 0 4024851.25 HCD 30 MS2 0 206.1 110 75.611 23245 23245 23237 QEplus033719.raw F4 197.1 191.2 223.5 163.4 249.7 211.7 219 4.33 1 FALSE 1.14E-05 3.49E-09 1.704 -250 116426 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MTAIQCK [R].mTAIQck.[L] N-Term(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex) 4 Q61687 Transcriptional regulator ATRX OS=Mus musculus OX=10090 GN=Atrx PE=1 SV=3 Q61687; Q3TSV4; A0A0G2JF35; Q3UZ76 Transcriptional regulator ATRX OS=Mus musculus OX=10090 GN=Atrx PE=1 SV=3; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Atrx PE=2 SV=1; Transcriptional regulator ATRX (Fragment) OS=Mus musculus OX=10090 GN=Atrx PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Atrx PE=2 SV=1 0 2 2 0.3347 0 1 1 1 655.37244 1309.7376 1309.73723 0.28 0.00018 0/0 0 0 3085716.75 HCD 30 MS2 24.73772 616.5 110 75.616 23247 23247 23237 QEplus033719.raw F4 608.9 546.1 669.9 499.3 711.1 663.7 339 2.48 1 FALSE 0.00192 0.03277 0.203 -250 116456 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGVMVAKK [RK].eGVMVAkk.[D] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 10 P63325; A0A3B2W864; Q9QXS1 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3" Q499F9; A0A338P731; P63325; A0A0R4J218; Q9QXS1-2; Q3UW83; A0A338P7K4; Q3U9P0; A0A3B2W864; Q9QXS1 "Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; 40S ribosomal protein S10 (Fragment) OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; S10_plectin domain-containing protein OS=Mus musculus OX=10090 GN=Rps10 PE=2 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3" 1 3 3 0.4444 0 1 1 1 516.99689 1548.97611 1548.97505 0.69 0.00035 0/0 0 0 21098480 HCD 30 MS2 45.87523 1649.2 61.234 75.6301 23252 23252 23248 QEplus033719.raw F4 1634.4 1360.4 1844.2 1278.1 2013.1 1764.9 263 2.16 3 FALSE 0.0008268 0.01141 0.382 -250 116488 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVLQEDAEK [K].sVLQEDAEk.[L] N-Term(TMT6plex); K9(TMT6plex) 7 O35551 Rab GTPase-binding effector protein 1 OS=Mus musculus OX=10090 GN=Rabep1 PE=1 SV=2 O35551-5; O35551-6; O35551; O35551-4; J3QJV7; O35551-3; O35551-2 Isoform 5 of Rab GTPase-binding effector protein 1 OS=Mus musculus OX=10090 GN=Rabep1; Isoform 6 of Rab GTPase-binding effector protein 1 OS=Mus musculus OX=10090 GN=Rabep1; Rab GTPase-binding effector protein 1 OS=Mus musculus OX=10090 GN=Rabep1 PE=1 SV=2; Isoform 4 of Rab GTPase-binding effector protein 1 OS=Mus musculus OX=10090 GN=Rabep1; Rab GTPase-binding effector protein 1 OS=Mus musculus OX=10090 GN=Rabep1 PE=1 SV=1; Isoform 3 of Rab GTPase-binding effector protein 1 OS=Mus musculus OX=10090 GN=Rabep1; Isoform 2 of Rab GTPase-binding effector protein 1 OS=Mus musculus OX=10090 GN=Rabep1 0 2 2 0.0912 0 1 1 1 738.9209 1476.83452 1476.83099 2.39 0.00176 0/0 0 0 2847003.75 HCD 30 MS2 0 317.1 110 75.6399 23256 23256 23248 QEplus033719.raw F4 380.4 225.8 330.2 310.1 340.6 315.5 474 2.85 1 FALSE 1.14E-05 1.08E-05 1.041 -250 116504 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SKGGVVGIK [K].skGGVVGIk.[V] N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex) 11 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 A0A0U1RPT5; Q9CPQ9; D3YWI1; A0A0U1RPN8; A6ZI47; D3YV98; A6ZI46; D3Z510; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart2 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=2; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 1 3 3 0.2645 0 1 1 1 511.3432 1532.01505 1532.01387 0.77 0.00039 0/0 0 0 21507556 HCD 30 MS2 58.09888 1286.9 50.597 75.6444 23258 23258 23248 QEplus033719.raw F4 1367.4 1151.7 1303.9 1409.6 1186.5 1302.6 172 2.76 1 FALSE 0.0001603 0.003835 0.532 -250 116521 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALELEQERK [R].aLELEQERk.[R] N-Term(TMT6plex); K9(TMT6plex) 3 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4; Q3TZQ2 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 1 2 2 0.2028 0 1 1 1 787.4682 1573.92912 1573.93138 -1.43 -0.00113 0/0 0 0 12920945 HCD 30 MS2 0 390.8 110 75.6542 23261 23261 23259 QEplus033719.raw F4 414.5 326.5 396.9 284.5 533 389.5 464 3.55 1 FALSE 1.14E-05 3.84E-06 1.126 -250 116530 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLQLAIR [R].hLQLAIR.[NG] N-Term(TMT6plex) 17 Q149V4; Q8BFU2; Q3THW5; P27661 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1;Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3;Histone H2A.V OS=Mus musculus OX=10090 GN=H2az2 PE=1 SV=3;Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 Q149V4; Q8BFU2; Q3THW5; C0HKE5; P0C0S6; Q8CGP5; A0AUV1; Q8CGP4; Q3TFU6; Q8R1M2; Q8R029; P27661; A0A0N4SV66; Q64426; Q8CGP7; Q8CGP6; Q6GSS7 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1; Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3; Histone H2A.V OS=Mus musculus OX=10090 GN=H2az2 PE=1 SV=3; Histone H2A type 1-G OS=Mus musculus OX=10090 GN=H2ac11 PE=1 SV=1; Histone H2A.Z OS=Mus musculus OX=10090 GN=H2az1 PE=1 SV=2; Histone H2A type 1-F OS=Mus musculus OX=10090 GN=Hist1h2af PE=1 SV=3; Histone H2A (Fragment) OS=Mus musculus OX=10090 GN=H2ac12 PE=2 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2ac1 PE=1 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2az1 PE=2 SV=1; Histone H2A.J OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2az2 PE=2 SV=1; Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2; Histone H2A OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A (Fragment) OS=Mus musculus domesticus OX=10092 GN=H2A PE=2 SV=1; Histone H2A type 1-K OS=Mus musculus OX=10090 GN=H2ac15 PE=1 SV=3; Histone H2A type 1-H OS=Mus musculus OX=10090 GN=H2ac12 PE=1 SV=3; Histone H2A type 2-A OS=Mus musculus OX=10090 GN=Hist2h2aa1 PE=1 SV=3 0 2 2 0.1571 0 1 1 1 540.34827 1079.68926 1079.68868 0.53 0.00029 0/0 0 0 293923328 HCD 30 MS2 23.35571 576.6 4.478 75.6565 23262 23262 23259 QEplus033719.raw F4 555.4 619 718.6 367 674.5 525.1 20 2.61 4 FALSE 0.002249 0.04376 0.162 -250 116536 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVQGHQQLDSYK [K].vVQGHQQLDSYk.[N] N-Term(TMT6plex); K12(TMT6plex) 2 A0A1S6GWH5 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1 A0A1S6GWH5; Q02053 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1; Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus OX=10090 GN=Uba1 PE=1 SV=1 0 3 3 0.7304 0 1 1 1 620.6842 1860.03806 1860.03797 0.05 0.00003 0/0 0 0 49661456 HCD 30 MS2 29.54707 734.8 18.44 75.6588 23263 23263 23259 QEplus033719.raw F4 752.6 688.2 785 620.6 907.6 655 480 4.97 1 FALSE 1.14E-05 7.55E-10 1.83 -250 116542 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILLSSGR [K].iLLSSGR.[D] N-Term(TMT6plex) 6 Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 A0A1W2P7B7; Q9JJD8; Q542X7; A0A1W2P6Q3; A0A1W2P828; A0A1W2P871 T-complex protein 1 subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1; CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=2 SV=1; CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1; T-complex protein 1 subunit beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1; T-complex protein 1 subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1; T-complex protein 1 subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 0 2 2 0.3058 0 1 1 1 487.81381 974.62035 974.6196 0.77 0.00038 0/0 0 0 30968386 HCD 30 MS2 72.1683 924 18.154 75.661 23264 23264 23259 QEplus033719.raw F4 770.6 908.1 1096.9 673.1 1039.6 1056 42 2.06 1 FALSE 0.001108 0.01451 0.339 -250 116552 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDLGASSPSMK [K].gDLGASSPSMk.[L] N-Term(TMT6plex); K11(TMT6plex) 6 E9Q616; Q6UIL4 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1;AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1 A0PJF4; E9Q616; Q6UIL4; Q8CGE7; Q8VDN3; Q8BKS2 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=2 0 2 2 0.3952 0 1 1 1 754.41492 1507.82256 1507.81905 2.33 0.00175 0/0 0 0 22302762 HCD 30 MS2 0 930.4 85.079 75.6633 23265 23265 23259 QEplus033719.raw F4 943.2 960.6 1041.1 716.4 1018.8 902.1 363 3.77 2 FALSE 1.14E-05 2.50E-09 1.732 -250 116557 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YVSFEDR [K].yVSFEDR.[H] N-Term(TMT6plex) 2 Q9R059 Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=2 F2Z455; Q9R059 Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=1; Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=2 0 2 2 0.3799 0 1 1 1 572.79572 1144.58415 1144.5836 0.48 0.00027 0/0 0 0 22154150 HCD 30 MS2 45.46135 897 42.547 75.6656 23266 23266 23259 QEplus033719.raw F4 905.2 742.4 965.2 839.9 937.6 991.8 79 2.79 1 FALSE 0.0005076 0.007883 0.441 -250 116575 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLSLADGK [R].gLSLADGk.[W] N-Term(TMT6plex); K8(TMT6plex) 9 I7HPY2 "Procollagen, type XI, alpha 2 (Fragment) OS=Mus musculus OX=10090 GN=Col11a2 PE=4 SV=1" Q64739-7; Q64739-3; I7HPY2; Q64739; Q64739-5; Q64739-6; I7HJS8; A0A068BD44; Q64739-4 "Isoform 6 of Collagen alpha-2(XI) chain OS=Mus musculus OX=10090 GN=Col11a2; Isoform 2 of Collagen alpha-2(XI) chain OS=Mus musculus OX=10090 GN=Col11a2; Procollagen, type XI, alpha 2 (Fragment) OS=Mus musculus OX=10090 GN=Col11a2 PE=4 SV=1; Collagen alpha-2(XI) chain OS=Mus musculus OX=10090 GN=Col11a2 PE=2 SV=3; Isoform 4 of Collagen alpha-2(XI) chain OS=Mus musculus OX=10090 GN=Col11a2; Isoform 5 of Collagen alpha-2(XI) chain OS=Mus musculus OX=10090 GN=Col11a2; Procollagen, type XI, alpha 2 OS=Mus musculus OX=10090 GN=Col11a2 PE=4 SV=1; Collagen type XI alpha 2 OS=Mus musculus OX=10090 GN=Col11a2 PE=2 SV=1; Isoform 3 of Collagen alpha-2(XI) chain OS=Mus musculus OX=10090 GN=Col11a2" 0 3 3 0.129 0 1 1 2 406.92023 1218.74613 1218.74581 0.26 0.00011 0/0 0 0 12055404 HCD 30 MS2 17.77522 540.5 103.492 75.6727 23269 23269 23259 QEplus033719.raw F4 545.8 453.3 498.1 371.8 901.5 472.8 645 1.86 1 FALSE 0.001744 0.02967 0.218 -250 116585 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIYSEELR [K].nIYSEELR.[E] N-Term(TMT6plex) 3 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 P48678; P48678-2; P48678-3 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2; Isoform C of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna; Isoform C2 of Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna 0 2 2 0.4343 0 1 1 1 626.84076 1252.67424 1252.67348 0.61 0.00038 0/0 0 0 34430088 HCD 30 MS2 9.403142 699 45.845 75.68 23271 23271 23270 QEplus033719.raw F4 687.1 545 737.7 643.5 826.8 754.1 293 2.97 1 FALSE 1.14E-05 0.0001662 0.815 -250 116609 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERLESLNIQR [K].eRLESLNIQR.[E] N-Term(TMT6plex) 6 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3UEK3; Q6A0B9; Q3TKF9; Q3UL99; Q3UM46 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; MKIAA0139 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 3 3 0.5183 0 1 1 1 496.28952 1486.85401 1486.85391 0.07 0.00003 0/0 0 0 40433608 HCD 30 MS2 38.12022 369.6 31.857 75.6868 23274 23274 23270 QEplus033719.raw F4 421 276.9 427.6 302.7 388.3 400.9 418 4.36 1 FALSE 1.14E-05 4.63E-06 1.111 -250 116616 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEIIANDQGNR [RK].vEIIANDQGNR.[IT] N-Term(TMT6plex) 32 P20029; Q3TEK2; B7U582; P17879 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3;Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1;Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1;Heat shock 70 kDa protein 1B OS=Mus musculus OX=10090 GN=Hspa1b PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q61696; Q3TRH3; Q3UDS0; Q3TEK2; Q3U9G2; Q3U9L2; Q3U6V3; D3Z5E2; Q3UEM8; Q3TAI8; O88687; Q3TH56; B7U582; Q9R2A1; Q3TZJ3; P63017; A1E2B8; Q3U7T8; P16627; Q3TQ13; Q3TB63; Q504P4; B2CSK2; P17879; Q3TI47; Q3UBA6; Q3TF16; P17156 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Heat shock 70 kDa protein 1A OS=Mus musculus OX=10090 GN=Hspa1a PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Heat shock cognate 71 kDa protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Heat shock protein 70 (Fragment) OS=Mus musculus OX=10090 GN=Hsp70.3 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1; Spermatid-specific heat shock protein 70 (Fragment) OS=Mus musculus OX=10090 GN=Hsc70t PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Inducible heat shock protein 70 OS=Mus musculus OX=10090 PE=3 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Heat shock 70 kDa protein 1-like OS=Mus musculus OX=10090 GN=Hspa1l PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Heat shock protein 1-like protein OS=Mus musculus OX=10090 PE=3 SV=1; Heat shock 70 kDa protein 1B OS=Mus musculus OX=10090 GN=Hspa1b PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Mus musculus OX=10090 GN=Hspa2 PE=1 SV=2 0 2 2 0.7011 0 1 1 1 729.39954 1457.7918 1457.79097 0.57 0.00041 0/0 0 0 34863856 HCD 30 MS2 34.66746 531.8 40.244 75.6891 23275 23275 23270 QEplus033719.raw F4 566.5 466.7 603.8 411.8 555.3 586.4 304 3.48 4 FALSE 1.14E-05 3.54E-07 1.323 -250 116641 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLSDQNDK [K].lLSDQNDk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 A0A0R4J0Q5 Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1 Q3V159; A0A0R4J0Q5; P21619 Uncharacterized protein OS=Mus musculus OX=10090 GN=Lmnb2 PE=2 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=2 0 2 2 0.4273 0 1 1 1 695.90112 1390.79497 1390.79422 0.54 0.00038 0/0 0 0 16703719 HCD 30 MS2 0 961.3 110 75.6961 23278 23278 23270 QEplus033719.raw F4 1107.1 597.1 1075.9 1059.6 634.8 1293.6 500 3.3 1 FALSE 1.14E-05 0.0001036 0.854 -250 116651 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SALGPNVTK [R].sALGPNVTk.[I] N-Term(TMT6plex); K9(TMT6plex) 2 Q3TIV5 Zinc finger CCCH domain-containing protein 15 OS=Mus musculus OX=10090 GN=Zc3h15 PE=1 SV=2 Q3TIV5; Q3TIV5-2 Zinc finger CCCH domain-containing protein 15 OS=Mus musculus OX=10090 GN=Zc3h15 PE=1 SV=2; Isoform 2 of Zinc finger CCCH domain-containing protein 15 OS=Mus musculus OX=10090 GN=Zc3h15 0 2 2 0.6193 0 1 1 1 672.91565 1344.82402 1344.82512 -0.82 -0.00055 0/0 0 0 16064090 HCD 30 MS2 11.61879 1037.4 110 75.6986 23279 23279 23270 QEplus033719.raw F4 1091.9 879.9 1134.2 739.2 1244.3 1135 520 3.52 1 FALSE 4.43E-05 0.001453 0.628 -250 116660 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGQAMASTEEK [R].vGQAMASTEEk.[A] N-Term(TMT6plex); K11(TMT6plex) 10 Q3TUR1 Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1 Q3TUR1; Q3UA28; Q3TG02; Q3U573; Q3U9H4; Q5U412; Q3U547; Q8BMP9; A0A1S6GWK0; Q3TVN9 Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1 0 3 3 0.5513 0 1 1 1 536.961 1608.86844 1608.86673 1.07 0.00057 0/0 0 0 13532431 HCD 30 MS2 13.45817 935.1 110 75.7011 23280 23280 23270 QEplus033719.raw F4 935.3 785.5 1052.7 756.3 1051.2 1029.9 358 4.19 1 FALSE 1.14E-05 1.25E-07 1.409 -250 116676 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MSLAQK [K].mSLAQk.[K] N-Term(TMT6plex); K6(TMT6plex) 4 P47962 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3 Q3THE1; P47962; Q3TKR5; Q3U850 Ribosomal_L18_c domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; 60S ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=1 SV=3; Ribosomal protein L5 OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1; Ribosomal_L18_c domain-containing protein OS=Mus musculus OX=10090 GN=Rpl5 PE=2 SV=1 0 2 2 0.3378 0 1 1 1 568.34674 1135.6862 1135.69094 -4.17 -0.00237 0/0 0 0 48650784 HCD 30 MS2 40.67482 1260.6 19.389 75.7132 23284 23284 23281 QEplus033719.raw F4 1236.2 1156.1 1412.5 956.1 1443.4 1359.5 221 2.22 1 FALSE 0.006577 0.1048 -0.007 -250 116686 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERSDALNSAIDK [K].eRSDALNSAIDk.[M] N-Term(TMT6plex); K12(TMT6plex) 4 Q545R0 "Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1" A0A494BAD0; Q6NV50; Q3TGQ3; Q545R0 "Catenin alpha-1 (Fragment) OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1; Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ctnna1 PE=2 SV=1; Catenin (Cadherin associated protein), alpha 1 OS=Mus musculus OX=10090 GN=Ctnna1 PE=1 SV=1" 1 3 3 0.5342 0 1 1 1 593.00085 1776.98801 1776.9856 1.36 0.0008 0/0 0 0 25322936 HCD 30 MS2 38.96239 969.5 57.741 75.7154 23285 23285 23281 QEplus033719.raw F4 957.9 772.7 1131.5 790.6 1045.1 1119.1 475 4.53 1 FALSE 1.14E-05 1.29E-10 1.976 -250 116691 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLTGEFEK [R].hLTGEFEk.[EK] N-Term(TMT6plex); K8(TMT6plex) 4 Q3ULW0 GTP-binding nuclear protein Ran OS=Mus musculus OX=10090 GN=Ran PE=2 SV=1 A6H622; Q3ULW0; Q14AA6; P62827 GTP-binding nuclear protein Ran OS=Mus musculus OX=10090 GN=Rasl2-9 PE=2 SV=1; GTP-binding nuclear protein Ran OS=Mus musculus OX=10090 GN=Ran PE=2 SV=1; GTP-binding nuclear protein Ran OS=Mus musculus OX=10090 GN=1700009N14Rik PE=1 SV=1; GTP-binding nuclear protein Ran OS=Mus musculus OX=10090 GN=Ran PE=1 SV=3 0 3 3 0.56 0 1 1 1 473.60672 1418.80561 1418.80439 0.86 0.00041 0/0 0 0 20411396 HCD 30 MS2 40.48124 1329.6 71.125 75.7177 23286 23286 23281 QEplus033719.raw F4 1546.1 1146.8 1275 1140.2 1826.4 1043.3 468 3.5 1 FALSE 1.14E-05 2.92E-06 1.149 -250 116697 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSAITGPVAK [K].gSAITGPVAk.[E] N-Term(TMT6plex); K10(TMT6plex) 1 P62830 60S ribosomal protein L23 OS=Mus musculus OX=10090 GN=Rpl23 PE=1 SV=1 P62830 60S ribosomal protein L23 OS=Mus musculus OX=10090 GN=Rpl23 PE=1 SV=1 0 2 2 0.3644 0 1 1 1 679.92444 1358.8416 1358.84077 0.61 0.00041 0/0 0 0 13132115 HCD 30 MS2 22.8944 957.3 110 75.7202 23287 23287 23281 QEplus033719.raw F4 1004.3 869.8 1062 773.6 1033.1 1001.3 432 3.76 1 FALSE 1.14E-05 1.44E-08 1.587 -250 116705 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGQAMASTEEK [R].vGQAMASTEEk.[A] N-Term(TMT6plex); K11(TMT6plex) 10 Q3TUR1 Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1 Q3TUR1; Q3UA28; Q3TG02; Q3U573; Q3U9H4; Q5U412; Q3U547; Q8BMP9; A0A1S6GWK0; Q3TVN9 Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Mus musculus OX=10090 GN=Stt3a PE=2 SV=1 0 2 2 0.5301 0 1 1 1 804.93701 1608.86675 1608.86673 0.01 0.00001 0/0 0 0 11496385 HCD 30 MS2 18.58018 662.4 110 75.7227 23288 23288 23281 QEplus033719.raw F4 584.6 617.8 785.8 543.2 729.9 713.2 362 4.81 1 FALSE 1.14E-05 2.85E-10 1.911 -250 116710 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLSDQNDK [K].lLSDQNDk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 A0A0R4J0Q5 Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1 Q3V159; A0A0R4J0Q5; P21619 Uncharacterized protein OS=Mus musculus OX=10090 GN=Lmnb2 PE=2 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=2 0 3 3 0.5092 0 1 1 1 464.26913 1390.79285 1390.79422 -0.98 -0.00045 0/0 0 0 10627326 HCD 30 MS2 37.30126 1064.4 110 75.7252 23289 23289 23281 QEplus033719.raw F4 1105.8 838.9 1160.7 1006.4 1036.4 1238.1 510 2.71 1 FALSE 0.002249 0.04365 0.162 -250 116752 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LYSESLAR [K].lYSESLAR.[Y] N-Term(TMT6plex) 8 Q3UPA3; P50396 Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1;Rab GDP dissociation inhibitor alpha OS=Mus musculus OX=10090 GN=Gdi1 PE=1 SV=3 Q3UUX9; Q3UPA3; Q3TIY6; Q61598-2; Q3UC72; A0A1Y7VL99; P50396; Q61598 Rab GDP dissociation inhibitor OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Rab GDP dissociation inhibitor OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Isoform 2 of Rab GDP dissociation inhibitor beta OS=Mus musculus OX=10090 GN=Gdi2; Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=1 SV=1; Rab GDP dissociation inhibitor alpha OS=Mus musculus OX=10090 GN=Gdi1 PE=1 SV=3; Rab GDP dissociation inhibitor beta OS=Mus musculus OX=10090 GN=Gdi2 PE=1 SV=1 0 2 2 0.6081 0 1 1 1 584.33234 1167.6574 1167.6571 0.25 0.00015 0/0 0 0 42442856 HCD 30 MS2 30.31541 850 31.472 75.7423 23295 23295 23292 QEplus033719.raw F4 812.2 786.9 935.7 719.3 1005.7 840.3 167 2.96 2 FALSE 2.26E-05 0.001071 0.656 -250 116759 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEYDVTVPR [K].gEYDVTVPR.[A] N-Term(TMT6plex) 1 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 0 2 2 0.2765 0 1 1 1 632.84045 1264.67363 1264.67348 0.12 0.00007 0/0 0 0 37761576 HCD 30 MS2 36.15923 982.8 37.956 75.7446 23296 23296 23292 QEplus033719.raw F4 938.4 967 1091.2 775.4 1150.6 974 284 2.93 1 FALSE 1.14E-05 4.99E-05 0.915 -250 116778 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSAITGPVAK [K].gSAITGPVAk.[E] N-Term(TMT6plex); K10(TMT6plex) 1 P62830 60S ribosomal protein L23 OS=Mus musculus OX=10090 GN=Rpl23 PE=1 SV=1 P62830 60S ribosomal protein L23 OS=Mus musculus OX=10090 GN=Rpl23 PE=1 SV=1 0 3 3 0.577 0 1 1 1 453.61893 1358.84223 1358.84077 1.07 0.00049 0/0 0 0 8503651 HCD 30 MS2 27.97212 680.9 83.873 75.7513 23299 23299 23292 QEplus033719.raw F4 689 560.9 747.8 584.1 694.2 809.2 432 3.31 1 FALSE 1.14E-05 8.44E-05 0.871 -250 116788 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VHFYCK [R].vHFYck.[S] N-Term(TMT6plex); C5(Carbamidomethyl); K6(TMT6plex) 7 Q60710 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 OS=Mus musculus OX=10090 GN=Samhd1 PE=1 SV=3 Q3TCJ7; Q8C5C0; Q6ZQM3; Q60710; F6TVP2; E9PYG9; Q60710-2 "Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 OS=Mus musculus OX=10090 GN=Samhd1 PE=2 SV=1; Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 OS=Mus musculus OX=10090 GN=Samhd1 PE=2 SV=1; cDNA fis, clone TRACH3010757, highly similar to Interferon-gamma inducible protein MG11 OS=Mus musculus OX=10090 GN=Samhd1 PE=2 SV=1; Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 OS=Mus musculus OX=10090 GN=Samhd1 PE=1 SV=3; Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 (Fragment) OS=Mus musculus OX=10090 GN=Samhd1 PE=1 SV=1; Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 OS=Mus musculus OX=10090 GN=Samhd1 PE=1 SV=1; Isoform 2 of Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 OS=Mus musculus OX=10090 GN=Samhd1" 0 3 3 0.5034 0 1 1 1 437.91409 1311.72773 1311.72838 -0.5 -0.00022 0/0 0 0 7308799.5 HCD 30 MS2 9.529884 654.9 110 75.7538 23300 23300 23292 QEplus033719.raw F4 684 559.2 673.4 523.5 856.6 632.9 350 2.94 1 FALSE 0.001395 0.01991 0.282 -250 116792 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEYDVTVPR [K].gEYDVTVPR.[A] N-Term(TMT6plex) 1 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 0 3 3 0.3113 0 1 1 1 422.22952 1264.67401 1264.67348 0.42 0.00018 0/0 0 0 6186658.5 HCD 30 MS2 50.18417 673.9 110 75.7563 23301 23301 23292 QEplus033719.raw F4 840 409 533.9 408.1 1166.7 685.8 293 3.18 1 FALSE 5.44E-05 0.002096 0.594 -250 116797 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERLESLNIQR [K].eRLESLNIQR.[E] N-Term(TMT6plex) 6 P23116 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5 P23116; Q3UEK3; Q6A0B9; Q3TKF9; Q3UL99; Q3UM46 Eukaryotic translation initiation factor 3 subunit A OS=Mus musculus OX=10090 GN=Eif3a PE=1 SV=5; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; MKIAA0139 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1; PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3a PE=2 SV=1 1 2 2 0.481 0 1 1 1 743.92932 1486.85137 1486.85391 -1.71 -0.00127 0/0 0 0 4581917.5 HCD 30 MS2 0 166.6 110 75.7588 23302 23302 23292 QEplus033719.raw F4 156.3 128.3 212.7 136.8 175.6 189.7 412 3.16 1 FALSE 1.14E-05 0.0002873 0.769 -250 116822 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDLGASSPSMK [K].gDLGASSPSMk.[L] N-Term(TMT6plex); K11(TMT6plex) 6 E9Q616; Q6UIL4 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1;AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1 A0PJF4; E9Q616; Q6UIL4; Q8CGE7; Q8VDN3; Q8BKS2 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=2 0 3 3 0.1125 0 1 1 1 503.27878 1507.82178 1507.81905 1.81 0.00091 0/0 0 0 52513648 HCD 30 MS2 19.60532 663.9 23.576 75.7709 23306 23306 23303 QEplus033719.raw F4 614.7 563.7 734.1 619.6 699.2 752.3 360 4 2 FALSE 1.14E-05 0.0001026 0.855 -250 116836 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLLSGNQDK [K].sLLSGNQDk.[N] N-Term(TMT6plex); K9(TMT6plex) 2 A0A0G2JFH2 Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 A0A0G2JFH2; Q60638 Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Microtubule-associated protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=2 SV=1 0 2 2 0.3404 0 1 1 1 710.41309 1419.8189 1419.82076 -1.32 -0.00093 0/0 0 0 11762025 HCD 30 MS2 37.62577 750.5 110 75.7757 23308 23308 23303 QEplus033719.raw F4 832.7 497.1 726.7 826.3 791.3 829 456 2.35 1 FALSE 1.14E-05 1.96E-05 0.992 -250 116849 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETFDPEK [K].eTFDPEk.[E] N-Term(TMT6plex); K7(TMT6plex) 5 Q8CIE6 Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2 Q63ZW9; Q8R393; Q8CIE6; F8WHL2; Q8BTF0 Copa protein (Fragment) OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1; Copa protein (Fragment) OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1 0 2 2 0.2395 0 1 1 1 662.36285 1323.71843 1323.71965 -0.92 -0.00061 0/0 0 0 7127968 HCD 30 MS2 27.60547 957.6 110 75.7804 23310 23310 23303 QEplus033719.raw F4 1017.2 697.5 999 655.6 1237.3 1139 367 2.38 1 FALSE 0.0007056 0.01018 0.402 -250 116873 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQELQDK [K].vQELQDk.[L] N-Term(TMT6plex); K7(TMT6plex) 1 P15497 SWISS-PROT:P15497 (Bos taurus) Apolipoprotein A-I precursor P15497 SWISS-PROT:P15497 (Bos taurus) Apolipoprotein A-I precursor 0 2 2 0.2817 0 1 1 1 659.39276 1317.77825 1317.77784 0.31 0.0002 0/0 0 0 10052644 HCD 30 MS2 21.59984 896.9 110 75.7877 23313 23313 23303 QEplus033719.raw F4 887.4 592.8 691.4 469.6 2043.5 696.9 523 2.84 1 TRUE 0.0002419 0.004973 0.502 -250 116897 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLPGVVTR [K].sLPGVVTR.[H] N-Term(TMT6plex) 3 Q3TGZ3 "Isocitrate dehydrogenase [NAD] subunit, mitochondrial OS=Mus musculus OX=10090 GN=Idh3g PE=1 SV=1" Q3TGZ3; Q3TKM5; Q684I8 "Isocitrate dehydrogenase [NAD] subunit, mitochondrial OS=Mus musculus OX=10090 GN=Idh3g PE=1 SV=1; Isocitrate dehydrogenase [NAD] subunit, mitochondrial OS=Mus musculus OX=10090 GN=Idh3g PE=2 SV=1; Isocitrate dehydrogenase [NAD] subunit, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Idh3g PE=2 SV=1" 0 2 2 0.5311 0 1 1 1 529.33228 1057.65727 1057.65671 0.53 0.00028 0/0 0 0 39528008 HCD 30 MS2 9.016831 940.8 48.874 75.7995 23317 23317 23314 QEplus033719.raw F4 993.6 699.8 989.3 988 841.3 1132.8 127 2.73 1 FALSE 0.001607 0.02584 0.239 -250 116902 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGDECELLGHNK [K].kGDEcELLGHNk.[N] N-Term(TMT6plex); K1(TMT6plex); C5(Carbamidomethyl); K12(TMT6plex) 3 Q8BFR5 "Elongation factor Tu, mitochondrial OS=Mus musculus OX=10090 GN=Tufm PE=1 SV=1" Q8BFR5; Q8BFR5-2; A0A0U1RPC4 "Elongation factor Tu, mitochondrial OS=Mus musculus OX=10090 GN=Tufm PE=1 SV=1; Isoform 2 of Elongation factor Tu, mitochondrial OS=Mus musculus OX=10090 GN=Tufm; Elongation factor Tu, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Tufm PE=1 SV=1" 1 4 4 0.6589 0 1 1 1 522.54364 2087.15273 2087.15224 0.24 0.00012 0/0 0 0 29227220 HCD 30 MS2 16.52854 613.1 31.489 75.8018 23318 23318 23314 QEplus033719.raw F4 653.2 381.5 625.2 755.3 537.1 726.4 451 4.28 1 FALSE 1.14E-05 1.70E-07 1.384 -250 116907 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CLPTPK [R].cLPTPk.[C] N-Term(TMT6plex); C1(Carbamidomethyl); K6(TMT6plex) 4 P62717 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1 A0A1D5RMC7; A0A1D5RM79; A0A1D5RM85; P62717 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a (Fragment) OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1 0 2 2 0.3905 0 1 1 1 587.35669 1173.7061 1173.70659 -0.41 -0.00024 0/0 0 0 24278758 HCD 30 MS2 12.10545 1349.4 76.022 75.8041 23319 23319 23314 QEplus033719.raw F4 1451.7 1149.5 1552.1 1058.7 1381.8 1502.7 248 1.69 1 FALSE 0.009524 0.1798 -0.117 -250 116916 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIDSSNLK [R].aIDSSNLk.[D] N-Term(TMT6plex); K8(TMT6plex) 3 A0JLQ7 Pcid2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pcid2 PE=2 SV=2 A0JLQ7; Q8BNM3; Q8BFV2 Pcid2 protein (Fragment) OS=Mus musculus OX=10090 GN=Pcid2 PE=2 SV=2; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Pcid2 PE=2 SV=1; PCI domain-containing protein 2 OS=Mus musculus OX=10090 GN=Pcid2 PE=1 SV=1 0 2 2 0.2118 0 1 1 1 653.3927 1305.77812 1305.77784 0.22 0.00014 0/0 0 0 10223944 HCD 30 MS2 20.74362 853.5 110 75.8066 23320 23320 23314 QEplus033719.raw F4 816.2 783.5 938.9 684 1032.9 865.5 448 2.55 1 FALSE 0.00079 0.01102 0.388 -250 116937 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGVTIKPTVDDD [R].rGVTIkPTVDDD.[-] N-Term(TMT6plex); K6(TMT6plex) 5 Q3UIJ2 Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1 Q9CRE9; Q3UIJ2; Q3U5H6; Q3TML6; Q6NY07 Protein-synthesizing GTPase (Fragment) OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase (Fragment) OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1; Protein-synthesizing GTPase OS=Mus musculus OX=10090 GN=Eif2s3x PE=1 SV=1; Eif2s3x protein (Fragment) OS=Mus musculus OX=10090 GN=Eif2s3x PE=2 SV=1 1 3 3 0.6657 0 1 1 1 592.00848 1774.0109 1774.01108 -0.1 -0.00006 0/0 0 0 23836198 HCD 30 MS2 7.994183 697.6 76.376 75.8139 23323 23323 23314 QEplus033719.raw F4 713.4 623 769.2 533.8 781.7 764.7 443 3.41 1 FALSE 1.14E-05 9.64E-05 0.86 -250 116946 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNIKPQVDR [K].vNIkPQVDR.[Y] N-Term(TMT6plex); K4(TMT6plex) 4 Q3TF14 Adenosylhomocysteinase OS=Mus musculus OX=10090 GN=Ahcy PE=1 SV=1 Q3U4D1; Q8BPI7; Q3TF14; Q5M9P0 Adenosylhomocysteinase OS=Mus musculus OX=10090 PE=2 SV=1; Adenosylhomocysteinase (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Adenosylhomocysteinase OS=Mus musculus OX=10090 GN=Ahcy PE=1 SV=1; Adenosylhomocysteinase OS=Mus musculus OX=10090 GN=Ahcy PE=2 SV=1 0 3 3 0.375 0 1 1 1 509.65149 1526.93991 1526.94188 -1.29 -0.00066 0/0 0 0 16782708 HCD 30 MS2 45.02515 1382.4 74.983 75.8161 23324 23324 23314 QEplus033719.raw F4 1325 1252.5 1440.8 1315.5 1391.1 1569.3 231 2.64 1 FALSE 0.00155 0.02338 0.255 -250 116955 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVTIMPK [K].rVTIMPk.[D] N-Term(TMT6plex); K7(TMT6plex) 8 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 1 3 3 0.4953 0 1 1 1 434.94919 1302.83301 1302.83318 -0.13 -0.00006 0/0 0 0 111855784 HCD 30 MS2 3.881794 456.1 10.693 75.8234 23326 23326 23325 QEplus033719.raw F4 388.4 479 522.9 270.4 671.7 403.9 281 3.19 2 FALSE 0.0007056 0.01029 0.4 -250 116969 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEIIANDQGNR [RK].vEIIANDQGNR.[IT] N-Term(TMT6plex) 32 P20029; Q3TEK2; B7U582; P17879 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3;Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1;Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1;Heat shock 70 kDa protein 1B OS=Mus musculus OX=10090 GN=Hspa1b PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q61696; Q3TRH3; Q3UDS0; Q3TEK2; Q3U9G2; Q3U9L2; Q3U6V3; D3Z5E2; Q3UEM8; Q3TAI8; O88687; Q3TH56; B7U582; Q9R2A1; Q3TZJ3; P63017; A1E2B8; Q3U7T8; P16627; Q3TQ13; Q3TB63; Q504P4; B2CSK2; P17879; Q3TI47; Q3UBA6; Q3TF16; P17156 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Heat shock 70 kDa protein 1A OS=Mus musculus OX=10090 GN=Hspa1a PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Heat shock cognate 71 kDa protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Heat shock protein 70 (Fragment) OS=Mus musculus OX=10090 GN=Hsp70.3 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1; Spermatid-specific heat shock protein 70 (Fragment) OS=Mus musculus OX=10090 GN=Hsc70t PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Inducible heat shock protein 70 OS=Mus musculus OX=10090 PE=3 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Heat shock 70 kDa protein 1-like OS=Mus musculus OX=10090 GN=Hspa1l PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Heat shock protein 1-like protein OS=Mus musculus OX=10090 PE=3 SV=1; Heat shock 70 kDa protein 1B OS=Mus musculus OX=10090 GN=Hspa1b PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Mus musculus OX=10090 GN=Hspa2 PE=1 SV=2 0 3 3 0.7404 0 1 1 1 486.60168 1457.7905 1457.79097 -0.32 -0.00016 0/0 0 0 82069032 HCD 30 MS2 6.500165 276.1 14.166 75.8282 23328 23328 23325 QEplus033719.raw F4 252.5 258.3 347.8 206.5 285.4 306.3 301 4.16 4 FALSE 1.14E-05 4.67E-05 0.92 -250 116976 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQPSQAAEEPAEKADEPMEH [K].aQPSQAAEEPAEkADEPMEH.[-] N-Term(TMT6plex); K13(TMT6plex) 3 Q3TS44 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 A0A1B0GS70; Q8BTU5; Q3TS44 Proteasome subunit alpha type-1 OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 1 3 3 0.8767 0 1 1 1 875.09509 2623.27073 2623.27102 -0.11 -0.0001 0/0 0 0 8304270 HCD 30 MS2 8.261518 244.8 110 75.8307 23329 23329 23325 QEplus033719.raw F4 236.4 271.8 261.8 190.4 278.1 230.2 156 6.49 1 FALSE 1.14E-05 6.31E-16 3.72 -250 116989 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FVYEACGAR [R].fVYEAcGAR.[LV] N-Term(TMT6plex); C6(Carbamidomethyl) 4 Q8N7N5 DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8 PE=1 SV=1 A2AHY8; Q8N7N5-2; Q01078; Q8N7N5 DDB1 and CUL4-associated factor 8-like OS=Mus musculus OX=10090 GN=Dcaf8l PE=1 SV=1; Isoform 2 of DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8; Protein PC326 OS=Mus musculus OX=10090 GN=Dcaf8l PE=2 SV=1; DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8 PE=1 SV=1 0 2 2 0.5749 0 1 1 1 651.32874 1301.65019 1301.65097 -0.6 -0.00039 0/0 0 0 9774768 HCD 30 MS2 37.35329 840.7 110 75.8357 23331 23331 23325 QEplus033719.raw F4 771.9 775.6 993.2 768.8 853.9 880.5 102 3.34 1 FALSE 1.14E-05 5.98E-06 1.09 -250 116997 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMANPPAAVK [R].sMANPPAAVk.[L] N-Term(TMT6plex); K10(TMT6plex) 3 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q80U36; Q9JHU4; F6ZX84 MKIAA0325 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2; Cytoplasmic dynein 1 heavy chain 1 (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=1 0 2 2 0.6321 0 1 1 1 722.42279 1443.8383 1443.83939 -0.75 -0.00054 0/0 0 0 8830365 HCD 30 MS2 10.46799 497 110 75.8383 23332 23332 23325 QEplus033719.raw F4 493.6 397.7 543.9 489.1 497.4 560.5 347 4.05 1 FALSE 1.14E-05 1.10E-08 1.609 -250 117016 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MLQADPNK [R].mLQADPNk.[V] N-Term(TMT6plex); K8(TMT6plex) 2 Q99LF4 RNA-splicing ligase RtcB homolog OS=Mus musculus OX=10090 GN=Rtcb PE=1 SV=1 Q99LF4; Q3TJ01 RNA-splicing ligase RtcB homolog OS=Mus musculus OX=10090 GN=Rtcb PE=1 SV=1; RNA-splicing ligase RtcB homolog OS=Mus musculus OX=10090 GN=Rtcb PE=2 SV=1 0 2 2 0.5238 0 1 1 1 687.8952 1374.78313 1374.78154 1.15 0.00079 0/0 0 0 5086947.5 HCD 30 MS2 19.95198 640.7 110 75.8433 23334 23334 23325 QEplus033719.raw F4 667.2 577.1 720.6 522.1 691.6 665.8 422 3.15 1 FALSE 1.14E-05 0.0001109 0.848 -250 117024 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DFNSMK [K].dFNSMk.[K] N-Term(TMT6plex); K6(TMT6plex) 6 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB90; Q3U9L3; Q3T9U9; A0A087WQK0; P27659 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 (Fragment) OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3 0 3 3 0.4353 0 1 1 1 400.55527 1199.65125 1199.64947 1.49 0.00059 0/0 0 0 4839401 HCD 30 MS2 62.95654 573.8 110 75.8458 23335 23335 23325 QEplus033719.raw F4 576.3 455.1 647.5 450.5 609.2 704.3 224 2.32 1 FALSE 0.00315 0.06148 0.11 -250 117041 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIVEDPDK [K].dIVEDPDk.[F] N-Term(TMT6plex); K8(TMT6plex) 2 Q7TQ48-1 Isoform 2 of Sarcalumenin OS=Mus musculus OX=10090 GN=Srl Q7TQ48; Q7TQ48-1 Sarcalumenin OS=Mus musculus OX=10090 GN=Srl PE=1 SV=2; Isoform 2 of Sarcalumenin OS=Mus musculus OX=10090 GN=Srl 0 2 2 0.5563 0 1 1 1 694.88776 1388.76824 1388.76733 0.65 0.00045 0/0 0 0 22355410 HCD 30 MS2 0 1116.1 110 75.8556 23338 23338 23336 QEplus033719.raw F4 1409 310.6 1005.9 1811.3 320.6 1839 351 2.84 1 FALSE 0.0008718 0.01202 0.373 -250 117050 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQDQISNIK [K].tQDQISNIk.[Y] N-Term(TMT6plex); K9(TMT6plex) 6 Q543N3 LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 A2A6H0; A2A6G8; Q543N3; A2A6G7; A2A6G6; A2A6G9 LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=8; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 0 2 2 0.5691 0 1 1 1 752.94031 1504.87334 1504.87353 -0.13 -0.00009 0/0 0 0 29787824 HCD 30 MS2 8.682771 806.6 73.471 75.8579 23339 23339 23336 QEplus033719.raw F4 783.6 902.7 960 481 1014.9 697.2 440 3.76 1 FALSE 1.14E-05 2.56E-06 1.16 -250 117068 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CLPTPK [R].cLPTPk.[C] N-Term(TMT6plex); C1(Carbamidomethyl); K6(TMT6plex) 4 P62717 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1 A0A1D5RMC7; A0A1D5RM79; A0A1D5RM85; P62717 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a (Fragment) OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1 0 3 3 0.3456 0 1 1 1 391.90707 1173.70667 1173.70659 0.07 0.00003 0/0 0 0 7736807.5 HCD 30 MS2 0 449.5 110 75.8626 23341 23341 23336 QEplus033719.raw F4 427.5 389.3 494.1 354.7 486.8 544.4 254 2.17 1 FALSE 0.007188 0.1128 -0.026 -250 117081 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIVEDPDK [K].dIVEDPDk.[F] N-Term(TMT6plex); K8(TMT6plex) 2 Q7TQ48-1 Isoform 2 of Sarcalumenin OS=Mus musculus OX=10090 GN=Srl Q7TQ48; Q7TQ48-1 Sarcalumenin OS=Mus musculus OX=10090 GN=Srl PE=1 SV=2; Isoform 2 of Sarcalumenin OS=Mus musculus OX=10090 GN=Srl 0 3 3 0.5824 0 1 1 1 463.59375 1388.7667 1388.76733 -0.46 -0.00021 0/0 0 0 8766232 HCD 30 MS2 66.04208 1292 110 75.8701 23344 23344 23336 QEplus033719.raw F4 1324.6 994.4 1368.2 1293.3 1196.2 1575.2 349 2.73 1 FALSE 0.00124 0.01671 0.313 -250 117091 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KKEEQEFVQK [R].kkEEQEFVQk.[Q] N-Term(TMT6plex); K1(TMT6plex); K2(TMT6plex); K10(TMT6plex) 1 A2RRK3 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Slk PE=2 SV=1 A2RRK3 Non-specific serine/threonine protein kinase OS=Mus musculus OX=10090 GN=Slk PE=2 SV=1 2 4 4 0.4286 0 1 1 1 553.08942 2209.33584 2209.33622 -0.17 -0.0001 0/0 0 0 5445702.5 HCD 30 MS2 29.962 760.9 110 75.8751 23346 23346 23336 QEplus033719.raw F4 758.1 656.7 820.6 615.7 895.5 819 259 3.5 1 FALSE 3.35E-05 0.001389 0.633 -250 117122 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISVEMEGQR [K].iSVEMEGQR.[Q] N-Term(TMT6plex) 4 B1ARU4 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 B1ARU4; E9QA63; Q9QXZ0; E9PVY8 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 2 2 0.6447 0 1 1 1 639.33923 1277.67119 1277.6721 -0.71 -0.00046 0/0 0 0 3540041.5 HCD 30 MS2 25.34353 671.4 110 75.8897 23351 23351 23347 QEplus033719.raw F4 671.6 540.7 767.4 568.1 658.9 821.8 272 3.04 1 FALSE 3.35E-05 0.001232 0.643 -250 117137 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTVELQAESGK [R].nTVELQAESGk.[R] N-Term(TMT6plex); K11(TMT6plex) 2 Q61074 Protein phosphatase 1G OS=Mus musculus OX=10090 GN=Ppm1g PE=1 SV=3 Q61074; A0A0J9YVG0 Protein phosphatase 1G OS=Mus musculus OX=10090 GN=Ppm1g PE=1 SV=3; Protein phosphatase 1G OS=Mus musculus OX=10090 GN=Ppm1g PE=1 SV=1 0 2 2 0.5948 0 1 1 1 817.46417 1633.92107 1633.91612 3.03 0.00247 0/0 0 0 2422200.5 HCD 30 MS2 0 260.3 110 75.8947 23353 23353 23347 QEplus033719.raw F4 254.8 231 265 198.2 328.3 284.8 463 4.64 1 FALSE 1.14E-05 1.24E-10 1.979 -250 117144 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TQDQISNIK [K].tQDQISNIk.[Y] N-Term(TMT6plex); K9(TMT6plex) 6 Q543N3 LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 A2A6H0; A2A6G8; Q543N3; A2A6G7; A2A6G6; A2A6G9 LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=8; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1; LIM and SH3 domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Lasp1 PE=1 SV=1 0 3 3 0.4765 0 1 1 1 502.29642 1504.8747 1504.87353 0.78 0.00039 0/0 0 0 29917280 HCD 30 MS2 16.84759 644.1 48.776 75.897 23354 23354 23347 QEplus033719.raw F4 640 614.8 709 445.9 844.3 610.7 448 4.05 1 FALSE 1.14E-05 5.80E-06 1.092 -250 117158 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYEGERPLTK [K].vYEGERPLTk.[D] N-Term(TMT6plex); K10(TMT6plex) 10 P20029 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q3U9G2; Q3U6V3; Q3TUS2; Q3UEM8; Q3U7T8; Q3TI47 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1 0 3 3 0.6223 0 1 1 1 550.65887 1649.96207 1649.96268 -0.37 -0.0002 0/0 0 0 6943403.5 HCD 30 MS2 64.59174 1249.8 110 75.902 23356 23356 23347 QEplus033719.raw F4 1533.4 1023.9 1228.6 1088.1 1441.8 1182.7 444 3.23 1 FALSE 1.14E-05 2.10E-05 0.986 -250 117207 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGDECELLGHNK [K].kGDEcELLGHNk.[N] N-Term(TMT6plex); K1(TMT6plex); C5(Carbamidomethyl); K12(TMT6plex) 3 Q8BFR5 "Elongation factor Tu, mitochondrial OS=Mus musculus OX=10090 GN=Tufm PE=1 SV=1" Q8BFR5; Q8BFR5-2; A0A0U1RPC4 "Elongation factor Tu, mitochondrial OS=Mus musculus OX=10090 GN=Tufm PE=1 SV=1; Isoform 2 of Elongation factor Tu, mitochondrial OS=Mus musculus OX=10090 GN=Tufm; Elongation factor Tu, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Tufm PE=1 SV=1" 1 3 3 0.676 0 1 1 1 696.38702 2087.14652 2087.15224 -2.74 -0.00191 0/0 0 0 10208995 HCD 30 MS2 54.37679 890 110 75.9216 23363 23363 23358 QEplus033719.raw F4 943.8 512.1 936.1 1124.3 555.8 1267.9 460 3.21 1 FALSE 1.14E-05 3.78E-12 2.267 -250 117213 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGGTSDVEVNEK [K].vGGTSDVEVNEk.[K] N-Term(TMT6plex); K12(TMT6plex) 2 P63038 "60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" P63038-2; P63038 "Isoform 2 of 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1; 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" 0 2 2 0.623 0 1 1 1 846.46405 1691.92082 1691.9216 -0.46 -0.00039 0/0 0 0 7195772.5 HCD 30 MS2 16.86459 381.5 110 75.9241 23364 23364 23358 QEplus033719.raw F4 360.4 346 464 336.4 376.4 405.8 379 3.74 1 FALSE 1.14E-05 5.59E-08 1.475 -250 117228 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQPSQAAEEPAEKADEPMEH [K].aQPSQAAEEPAEkADEPMEH.[-] N-Term(TMT6plex); K13(TMT6plex) 3 Q3TS44 Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 A0A1B0GS70; Q8BTU5; Q3TS44 Proteasome subunit alpha type-1 OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=2 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1 1 4 4 0.7149 0 1 1 1 656.57373 2623.27309 2623.27102 0.79 0.00052 0/0 0 0 5806505.5 HCD 30 MS2 0 232.1 110 75.9291 23366 23366 23358 QEplus033719.raw F4 222.1 212.3 258.2 196.4 250.9 252.4 162 5.05 1 FALSE 1.14E-05 2.80E-12 2.292 -250 117274 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DFSGGWR [K].dFSGGWR.[M] N-Term(TMT6plex) 2 Q99LE6 ATP-binding cassette sub-family F member 2 OS=Mus musculus OX=10090 GN=Abcf2 PE=1 SV=1 Q99LE6; Q3UVI9 ATP-binding cassette sub-family F member 2 OS=Mus musculus OX=10090 GN=Abcf2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Abcf2 PE=2 SV=1 0 2 2 0.3766 0 1 1 1 527.26971 1053.53215 1053.53151 0.61 0.00032 0/0 0 0 10896332 HCD 30 MS2 11.37288 1068.8 110 75.9512 23374 23374 23369 QEplus033719.raw F4 1110.4 805.4 1158.4 898.9 1210.7 1229.1 88 2.39 1 FALSE 0.001736 0.02926 0.22 -250 117283 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVAGEMGQNEPDQGGQR [R].lVAGEMGQNEPDQGGQR.[G] N-Term(TMT6plex) 4 A2AFQ2 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Mus musculus OX=10090 GN=Hsd17b10 PE=1 SV=1 O08756; Q9CYT3; A2AFQ2; Q99N15 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Mus musculus OX=10090 GN=Hsd17b10 PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsd17b10 PE=2 SV=1; 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Mus musculus OX=10090 GN=Hsd17b10 PE=1 SV=1; 17beta-hydroxysteroid dehydrogenase type 10/short chain L-3-hydroxyacyl-CoA dehydrogenase OS=Mus musculus OX=10090 GN=Hsd17b10 PE=1 SV=1 0 3 3 0.8327 0 1 1 1 672.33197 2014.98136 2014.98137 -0.01 0 0/0 0 0 13583123 HCD 30 MS2 56.0486 573.7 110 75.9538 23375 23375 23369 QEplus033719.raw F4 638.1 450.6 616.4 368.7 670.1 698.3 139 5.2 1 FALSE 1.14E-05 7.23E-12 2.214 -250 117290 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGDECELLGHNK [K].kGDEcELLGHNk.[N] N-Term(TMT6plex); K1(TMT6plex); C5(Carbamidomethyl); K12(TMT6plex) 3 Q8BFR5 "Elongation factor Tu, mitochondrial OS=Mus musculus OX=10090 GN=Tufm PE=1 SV=1" Q8BFR5; Q8BFR5-2; A0A0U1RPC4 "Elongation factor Tu, mitochondrial OS=Mus musculus OX=10090 GN=Tufm PE=1 SV=1; Isoform 2 of Elongation factor Tu, mitochondrial OS=Mus musculus OX=10090 GN=Tufm; Elongation factor Tu, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Tufm PE=1 SV=1" 1 3 3 0.7345 0 1 1 1 696.39227 2087.16227 2087.15224 4.81 0.00334 0/0 0 0 7337186.5 HCD 30 MS2 53.93834 893.4 110 75.9563 23376 23376 23369 QEplus033719.raw F4 936.7 491.6 947.8 1147.9 569 1267.1 424 2.9 1 FALSE 1.14E-05 1.08E-12 2.37 -250 117294 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQEYDFK [R].qQEYDFk.[M] N-Term(TMT6plex); K7(TMT6plex) 3 A0A0R4J0Q5 Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1 Q3V159; A0A0R4J0Q5; P21619 Uncharacterized protein OS=Mus musculus OX=10090 GN=Lmnb2 PE=2 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=2 0 2 2 0.5894 0 1 1 1 708.38458 1415.76189 1415.7571 3.38 0.00239 0/0 0 0 6962441 HCD 30 MS2 42.38062 701.6 110 75.9588 23377 23377 23369 QEplus033719.raw F4 747.4 647.6 778.2 606.9 705.5 724.1 265 2.63 1 FALSE 0.001591 0.02495 0.245 -250 117305 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAMEDGEIDGNK [K].eAMEDGEIDGNk.[V] N-Term(TMT6plex); K12(TMT6plex) 6 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 2 2 0.7394 0 1 1 1 883.43787 1765.86846 1765.86785 0.34 0.0003 0/0 0 0 3847942.5 HCD 30 MS2 0 426 110 75.9638 23379 23379 23369 QEplus033719.raw F4 466.1 418.8 455.2 252.7 567.2 395.7 158 4.49 1 FALSE 1.14E-05 2.43E-11 2.114 -250 117313 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENQSLQIK [R].eNQSLQIk.[H] N-Term(TMT6plex); K8(TMT6plex) 1 Q8BL66 Early endosome antigen 1 OS=Mus musculus OX=10090 GN=Eea1 PE=1 SV=2 Q8BL66 Early endosome antigen 1 OS=Mus musculus OX=10090 GN=Eea1 PE=1 SV=2 0 2 2 0.3403 0 1 1 1 709.4256 1417.84392 1417.8415 1.71 0.00121 0/0 0 0 5454988.5 HCD 30 MS2 48.34417 761.1 110 75.9712 23381 23381 23380 QEplus033719.raw F4 771.4 671.1 850.1 653.4 822.4 798.4 535 2.88 1 FALSE 1.14E-05 0.0001406 0.829 -250 117323 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNIKPQVDR [K].vNIkPQVDR.[Y] N-Term(TMT6plex); K4(TMT6plex) 4 Q3TF14 Adenosylhomocysteinase OS=Mus musculus OX=10090 GN=Ahcy PE=1 SV=1 Q3U4D1; Q8BPI7; Q3TF14; Q5M9P0 Adenosylhomocysteinase OS=Mus musculus OX=10090 PE=2 SV=1; Adenosylhomocysteinase (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Adenosylhomocysteinase OS=Mus musculus OX=10090 GN=Ahcy PE=1 SV=1; Adenosylhomocysteinase OS=Mus musculus OX=10090 GN=Ahcy PE=2 SV=1 0 2 2 0.5333 0 1 1 1 763.97308 1526.93889 1526.94188 -1.96 -0.0015 0/0 0 0 2533462.75 HCD 30 MS2 0 333.1 110 75.9737 23382 23382 23380 QEplus033719.raw F4 317.2 287.8 369.1 325 310.3 389.4 239 2.4 1 FALSE 0.003159 0.06182 0.109 -250 117331 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KEEIIK [KR].kEEIIk.[QTLG] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 2 Q5I0T8 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 Q5I0T8; A2A547 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1; Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 1 3 3 0.1903 0 1 1 3 482.98837 1446.95057 1446.94988 0.48 0.00023 0/0 0 0 127964144 HCD 30 MS2 13.46083 1287.6 12.682 75.976 23383 23383 23380 QEplus033719.raw F4 1448.6 1018.3 1279 1184.1 1502.7 1293 231 2.89 1 FALSE 0.001787 0.03081 0.212 -250 117332 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KEEILK [KR].kEEILk.[QTLG] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 20 Q9Z329; P70227 "Inositol 1,4,5-trisphosphate receptor type 2 OS=Mus musculus OX=10090 GN=Itpr2 PE=1 SV=4;Inositol 1,4,5-trisphosphate receptor type 3 OS=Mus musculus OX=10090 GN=Itpr3 PE=1 SV=3" P11881-7; A0A494BBM3; A0AUP1; D3Z1J2; Q9Z329; P11881-2; Q8BNX2; Q0IJ80; Q9Z329-3; P11881-8; Q6NV80; P11881-5; P11881-3; P70227; Q8C8N0; P11881-4; Q8CED6; P11881-6; Q9Z329-2; P11881 "Isoform 7 of Inositol 1,4,5-trisphosphate receptor type 1 OS=Mus musculus OX=10090 GN=Itpr1; Coiled-coil domain-containing protein 112 (Fragment) OS=Mus musculus OX=10090 GN=Ccdc112 PE=4 SV=1; Coiled-coil domain-containing protein 112 OS=Mus musculus OX=10090 GN=Ccdc112 PE=2 SV=2; Coiled-coil domain-containing protein 112 OS=Mus musculus OX=10090 GN=Ccdc112 PE=1 SV=2; Inositol 1,4,5-trisphosphate receptor type 2 OS=Mus musculus OX=10090 GN=Itpr2 PE=1 SV=4; Isoform 2 of Inositol 1,4,5-trisphosphate receptor type 1 OS=Mus musculus OX=10090 GN=Itpr1; Ion_trans domain-containing protein OS=Mus musculus OX=10090 GN=Itpr2 PE=2 SV=1; Itpr3 protein (Fragment) OS=Mus musculus OX=10090 GN=Itpr3 PE=2 SV=1; Isoform 3 of Inositol 1,4,5-trisphosphate receptor type 2 OS=Mus musculus OX=10090 GN=Itpr2; Isoform 8 of Inositol 1,4,5-trisphosphate receptor type 1 OS=Mus musculus OX=10090 GN=Itpr1; Itpr1 protein (Fragment) OS=Mus musculus OX=10090 GN=Itpr1 PE=2 SV=1; Isoform 5 of Inositol 1,4,5-trisphosphate receptor type 1 OS=Mus musculus OX=10090 GN=Itpr1; Isoform 3 of Inositol 1,4,5-trisphosphate receptor type 1 OS=Mus musculus OX=10090 GN=Itpr1; Inositol 1,4,5-trisphosphate receptor type 3 OS=Mus musculus OX=10090 GN=Itpr3 PE=1 SV=3; Ion_trans domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Itpr1 PE=2 SV=1; Isoform 4 of Inositol 1,4,5-trisphosphate receptor type 1 OS=Mus musculus OX=10090 GN=Itpr1; Ion_trans domain-containing protein OS=Mus musculus OX=10090 GN=Itpr2 PE=2 SV=1; Isoform 6 of Inositol 1,4,5-trisphosphate receptor type 1 OS=Mus musculus OX=10090 GN=Itpr1; Isoform 2 of Inositol 1,4,5-trisphosphate receptor type 2 OS=Mus musculus OX=10090 GN=Itpr2; Inositol 1,4,5-trisphosphate receptor type 1 OS=Mus musculus OX=10090 GN=Itpr1 PE=1 SV=2" 1 3 3 0.1903 0 1 2 4 482.98837 1446.95057 1446.94988 0.48 0.00023 0/0 0 0 127964144 HCD 30 MS2 13.46083 1287.6 12.682 75.976 23383 23383 23380 QEplus033719.raw F4 1448.6 1018.3 1279 1184.1 1502.7 1293 231 2.89 4 FALSE 0.001787 0.03081 0.212 -250 117333 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KEELLK [KR].kEELLk.[QTLG] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 6 Q6ZWV7 60S ribosomal protein L35 OS=Mus musculus OX=10090 GN=Rpl35 PE=1 SV=1 F6YXU0; Q3UJ88; A6PWD2; A6PWD2-4; Q3U1U4; Q6ZWV7 "60S ribosomal protein L35 (Fragment) OS=Mus musculus OX=10090 GN=Gm49368 PE=3 SV=1; Integrin_alpha2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Forkhead-associated domain-containing protein 1 OS=Mus musculus OX=10090 GN=Fhad1 PE=2 SV=1; Isoform 4 of Forkhead-associated domain-containing protein 1 OS=Mus musculus OX=10090 GN=Fhad1; Predicted gene, 49368 OS=Mus musculus OX=10090 GN=Gm49368 PE=1 SV=1; 60S ribosomal protein L35 OS=Mus musculus OX=10090 GN=Rpl35 PE=1 SV=1" 1 3 3 0.1903 0 1 3 5 482.98837 1446.95057 1446.94988 0.48 0.00023 0/0 0 0 127964144 HCD 30 MS2 13.46083 1287.6 12.682 75.976 23383 23383 23380 QEplus033719.raw F4 1448.6 1018.3 1279 1184.1 1502.7 1293 231 2.89 4 FALSE 0.001787 0.03081 0.212 -250 117337 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVVVCPK [K].aVVVcPk.[D] N-Term(TMT6plex); C5(Carbamidomethyl); K7(TMT6plex) 9 Q8C290 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1 Q8C290; Q8VEK3-2; Q3ULH5; Q3TVV6; Q3TXW2; Q3TGN5; O88568; Q3TWN5; Q8VEK3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; B30.2/SPRY domain-containing protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Heterogenous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=1 SV=1 0 2 2 0.5132 0 1 1 1 615.88525 1230.76323 1230.76444 -0.98 -0.0006 0/0 0 0 67567112 HCD 30 MS2 27.7643 1140.6 25.481 75.9782 23384 23384 23380 QEplus033719.raw F4 1216.9 1121.2 1329.4 895.5 1190.3 1090.1 432 3.02 1 FALSE 0.001108 0.01456 0.338 -250 117347 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WEKPESDGGSK [K].wEkPESDGGSk.[I] N-Term(TMT6plex); K3(TMT6plex); K11(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.46 0 1 1 1 636.35345 1907.04581 1907.04775 -1.02 -0.00065 0/0 0 0 9816314 HCD 30 MS2 16.65247 889 110 75.9808 23385 23385 23380 QEplus033719.raw F4 1037 261 641.6 1583.1 442.9 1368.2 433 2.5 2 FALSE 1.14E-05 3.40E-06 1.136 -250 117393 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAHEPLAVADAK [K].eAHEPLAVADAk.[L] N-Term(TMT6plex); K12(TMT6plex) 3 Q6DFW4 Nucleolar protein 58 OS=Mus musculus OX=10090 GN=Nop58 PE=1 SV=1 A0A087WSU5; A0A0A0MQ76; Q6DFW4 Nucleolar protein 58 (Fragment) OS=Mus musculus OX=10090 GN=Nop58 PE=1 SV=1; Nucleolar protein 58 OS=Mus musculus OX=10090 GN=Nop58 PE=1 SV=1; Nucleolar protein 58 OS=Mus musculus OX=10090 GN=Nop58 PE=1 SV=1 0 2 2 0.6199 0 1 1 1 854.98584 1708.9644 1708.96341 0.58 0.0005 0/0 0 0 3405844.25 HCD 30 MS2 0 157.7 110 76.0029 23393 23393 23391 QEplus033719.raw F4 150.3 144 178.4 135.3 159 179.4 393 4.13 1 FALSE 1.14E-05 2.43E-12 2.304 -250 117400 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQIALK [K].sQIALk.[EL] N-Term(TMT6plex); K6(TMT6plex) 2 P14152 "Malate dehydrogenase, cytoplasmic OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=3" P14152; A0A5F8MPN8 "Malate dehydrogenase, cytoplasmic OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=3; Malate dehydrogenase OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=1" 0 2 2 0.1198 0 1 1 1 559.37225 1117.73723 1117.73452 2.43 0.00136 0/0 0 0 14413897 HCD 30 MS2 56.71838 1049.8 91.574 76.0051 23394 23394 23391 QEplus033719.raw F4 1112.9 733.3 1066.1 1060.7 1088.4 1237.7 179 1.67 1 FALSE 0.004089 0.07541 0.074 -250 117401 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQLALK [K].sQLALk.[EL] N-Term(TMT6plex); K6(TMT6plex) 5 Q99KF2; Q6A078-2; Q6A078; E9Q9M0; A0A1W2P6U7 Cep290 protein (Fragment) OS=Mus musculus OX=10090 GN=Cep290 PE=2 SV=2; Isoform 2 of Centrosomal protein of 290 kDa OS=Mus musculus OX=10090 GN=Cep290; Centrosomal protein of 290 kDa OS=Mus musculus OX=10090 GN=Cep290 PE=1 SV=2; Centrosomal protein of 290 kDa OS=Mus musculus OX=10090 GN=Cep290 PE=1 SV=1; Centrosomal protein of 290 kDa (Fragment) OS=Mus musculus OX=10090 GN=Cep290 PE=4 SV=1 0 2 2 0.1198 0 1 2 2 559.37225 1117.73723 1117.73452 2.43 0.00136 0/0 0 0 14413897 HCD 30 MS2 56.71838 1049.8 91.574 76.0051 23394 23394 23391 QEplus033719.raw F4 1112.9 733.3 1066.1 1060.7 1088.4 1237.7 179 1.67 1 FALSE 0.004089 0.07541 0.074 -250 117410 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KEEIIK [KR].kEEIIk.[QTLG] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 2 Q5I0T8 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 Q5I0T8; A2A547 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1; Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 1 2 2 0.2059 0 1 1 3 723.97888 1446.95049 1446.94988 0.42 0.0003 0/0 0 0 13271949 HCD 30 MS2 22.43806 761.7 110 76.0076 23395 23395 23391 QEplus033719.raw F4 823.1 642.9 790.8 670.8 870.4 772.4 231 2.38 1 FALSE 0.00574 0.09633 0.017 -250 117411 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KEEILK [KR].kEEILk.[QTLG] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 20 Q9Z329; P70227 "Inositol 1,4,5-trisphosphate receptor type 2 OS=Mus musculus OX=10090 GN=Itpr2 PE=1 SV=4;Inositol 1,4,5-trisphosphate receptor type 3 OS=Mus musculus OX=10090 GN=Itpr3 PE=1 SV=3" P11881-7; A0A494BBM3; A0AUP1; D3Z1J2; Q9Z329; P11881-2; Q8BNX2; Q0IJ80; Q9Z329-3; P11881-8; Q6NV80; P11881-5; P11881-3; P70227; Q8C8N0; P11881-4; Q8CED6; P11881-6; Q9Z329-2; P11881 "Isoform 7 of Inositol 1,4,5-trisphosphate receptor type 1 OS=Mus musculus OX=10090 GN=Itpr1; Coiled-coil domain-containing protein 112 (Fragment) OS=Mus musculus OX=10090 GN=Ccdc112 PE=4 SV=1; Coiled-coil domain-containing protein 112 OS=Mus musculus OX=10090 GN=Ccdc112 PE=2 SV=2; Coiled-coil domain-containing protein 112 OS=Mus musculus OX=10090 GN=Ccdc112 PE=1 SV=2; Inositol 1,4,5-trisphosphate receptor type 2 OS=Mus musculus OX=10090 GN=Itpr2 PE=1 SV=4; Isoform 2 of Inositol 1,4,5-trisphosphate receptor type 1 OS=Mus musculus OX=10090 GN=Itpr1; Ion_trans domain-containing protein OS=Mus musculus OX=10090 GN=Itpr2 PE=2 SV=1; Itpr3 protein (Fragment) OS=Mus musculus OX=10090 GN=Itpr3 PE=2 SV=1; Isoform 3 of Inositol 1,4,5-trisphosphate receptor type 2 OS=Mus musculus OX=10090 GN=Itpr2; Isoform 8 of Inositol 1,4,5-trisphosphate receptor type 1 OS=Mus musculus OX=10090 GN=Itpr1; Itpr1 protein (Fragment) OS=Mus musculus OX=10090 GN=Itpr1 PE=2 SV=1; Isoform 5 of Inositol 1,4,5-trisphosphate receptor type 1 OS=Mus musculus OX=10090 GN=Itpr1; Isoform 3 of Inositol 1,4,5-trisphosphate receptor type 1 OS=Mus musculus OX=10090 GN=Itpr1; Inositol 1,4,5-trisphosphate receptor type 3 OS=Mus musculus OX=10090 GN=Itpr3 PE=1 SV=3; Ion_trans domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Itpr1 PE=2 SV=1; Isoform 4 of Inositol 1,4,5-trisphosphate receptor type 1 OS=Mus musculus OX=10090 GN=Itpr1; Ion_trans domain-containing protein OS=Mus musculus OX=10090 GN=Itpr2 PE=2 SV=1; Isoform 6 of Inositol 1,4,5-trisphosphate receptor type 1 OS=Mus musculus OX=10090 GN=Itpr1; Isoform 2 of Inositol 1,4,5-trisphosphate receptor type 2 OS=Mus musculus OX=10090 GN=Itpr2; Inositol 1,4,5-trisphosphate receptor type 1 OS=Mus musculus OX=10090 GN=Itpr1 PE=1 SV=2" 1 2 2 0.2059 0 1 2 4 723.97888 1446.95049 1446.94988 0.42 0.0003 0/0 0 0 13271949 HCD 30 MS2 22.43806 761.7 110 76.0076 23395 23395 23391 QEplus033719.raw F4 823.1 642.9 790.8 670.8 870.4 772.4 231 2.38 4 FALSE 0.00574 0.09633 0.017 -250 117412 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KEELLK [KR].kEELLk.[QTLG] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 6 Q6ZWV7 60S ribosomal protein L35 OS=Mus musculus OX=10090 GN=Rpl35 PE=1 SV=1 F6YXU0; Q3UJ88; A6PWD2; A6PWD2-4; Q3U1U4; Q6ZWV7 "60S ribosomal protein L35 (Fragment) OS=Mus musculus OX=10090 GN=Gm49368 PE=3 SV=1; Integrin_alpha2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Forkhead-associated domain-containing protein 1 OS=Mus musculus OX=10090 GN=Fhad1 PE=2 SV=1; Isoform 4 of Forkhead-associated domain-containing protein 1 OS=Mus musculus OX=10090 GN=Fhad1; Predicted gene, 49368 OS=Mus musculus OX=10090 GN=Gm49368 PE=1 SV=1; 60S ribosomal protein L35 OS=Mus musculus OX=10090 GN=Rpl35 PE=1 SV=1" 1 2 2 0.2059 0 1 3 5 723.97888 1446.95049 1446.94988 0.42 0.0003 0/0 0 0 13271949 HCD 30 MS2 22.43806 761.7 110 76.0076 23395 23395 23391 QEplus033719.raw F4 823.1 642.9 790.8 670.8 870.4 772.4 231 2.38 4 FALSE 0.00574 0.09633 0.017 -250 117420 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIAGATPHITAAEGR [R].eIAGATPHITAAEGR.[L] N-Term(TMT6plex) 11 Q8CAQ8; A0A0U1RP81 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1;MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q3U7N2; Q8CAQ8; E9QAY6; Q8CAQ8-2; A0A0U1RP81; Q3TVZ5; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1 0 3 3 0.6627 0 1 1 1 574.98309 1722.93473 1722.93361 0.65 0.00037 0/0 0 0 12657059 HCD 30 MS2 50.24694 790.1 79.381 76.0099 23396 23396 23391 QEplus033719.raw F4 783.3 698.3 845.2 715.4 929.3 769.3 402 4.24 2 FALSE 1.14E-05 1.20E-08 1.602 -250 117440 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAPWTSNSSEK [R].dAPWTSNSSEk.[A] N-Term(TMT6plex); K11(TMT6plex) 3 Q8VDJ3 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1 Q8VDJ3; A0A087WP83; Q3V1M8 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1 0 2 2 0.7114 0 1 1 1 840.435 1679.86272 1679.86409 -0.81 -0.00068 0/0 0 0 6643377 HCD 30 MS2 0 379.4 110 76.0172 23399 23399 23391 QEplus033719.raw F4 383.3 346.5 403.6 283.1 500.7 359.1 246 4.47 1 FALSE 1.14E-05 5.88E-10 1.851 -250 117458 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSTPLPTVSSSAENTR [R].sSTPLPTVSSSAENTR.[Q] N-Term(TMT6plex) 10 Q3UR33; Q61033; Q61029-2 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1;Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4;Isoform Delta of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo" Q3UR33; Q3U7B3; Q61029; Q3U955; Q61033; Q61029-4; Q61033-2; Q78WP6; Q61029-3; Q61029-2 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4; Isoform Gamma of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo; Isoform Zeta of Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo; LEM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Isoform Epsilon of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo; Isoform Delta of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo" 0 2 2 0.8209 0 1 1 1 931.9884 1862.96953 1862.9657 2.06 0.00191 0/0 0 0 4832016.5 HCD 30 MS2 0 130.2 110 76.0222 23401 23401 23391 QEplus033719.raw F4 129.4 136.6 140.7 92.2 163.5 119.1 323 4.41 3 FALSE 1.14E-05 6.31E-16 3.347 -250 117466 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLQLAIR [R].hLQLAIR.[NG] N-Term(TMT6plex) 17 Q149V4; Q8BFU2; Q3THW5; P27661 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1;Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3;Histone H2A.V OS=Mus musculus OX=10090 GN=H2az2 PE=1 SV=3;Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 Q149V4; Q8BFU2; Q3THW5; C0HKE5; P0C0S6; Q8CGP5; A0AUV1; Q8CGP4; Q3TFU6; Q8R1M2; Q8R029; P27661; A0A0N4SV66; Q64426; Q8CGP7; Q8CGP6; Q6GSS7 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1; Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3; Histone H2A.V OS=Mus musculus OX=10090 GN=H2az2 PE=1 SV=3; Histone H2A type 1-G OS=Mus musculus OX=10090 GN=H2ac11 PE=1 SV=1; Histone H2A.Z OS=Mus musculus OX=10090 GN=H2az1 PE=1 SV=2; Histone H2A type 1-F OS=Mus musculus OX=10090 GN=Hist1h2af PE=1 SV=3; Histone H2A (Fragment) OS=Mus musculus OX=10090 GN=H2ac12 PE=2 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2ac1 PE=1 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2az1 PE=2 SV=1; Histone H2A.J OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2az2 PE=2 SV=1; Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2; Histone H2A OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A (Fragment) OS=Mus musculus domesticus OX=10092 GN=H2A PE=2 SV=1; Histone H2A type 1-K OS=Mus musculus OX=10090 GN=H2ac15 PE=1 SV=3; Histone H2A type 1-H OS=Mus musculus OX=10090 GN=H2ac12 PE=1 SV=3; Histone H2A type 2-A OS=Mus musculus OX=10090 GN=Hist2h2aa1 PE=1 SV=3 0 3 3 0.1845 0 1 1 1 360.56815 1079.68988 1079.68868 1.12 0.0004 0/0 0 0 1269335040 HCD 30 MS2 2.74868 123.4 0.904 76.0295 23403 23403 23402 QEplus033719.raw F4 120.2 132.1 153 74 153.3 108 20 3.74 4 FALSE 0.001266 0.01735 0.306 -250 117482 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DFNSMK [K].dFNSMk.[K] N-Term(TMT6plex); K6(TMT6plex) 6 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB90; Q3U9L3; Q3T9U9; A0A087WQK0; P27659 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 (Fragment) OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3 0 2 2 0.4506 0 1 1 1 600.32855 1199.64983 1199.64947 0.3 0.00018 0/0 0 0 104356584 HCD 30 MS2 17.27376 1141.8 12.71 76.034 23405 23405 23402 QEplus033719.raw F4 1068.4 921.1 1288.8 1012.3 1217.7 1342.6 193 2.33 1 FALSE 0.007291 0.1167 -0.035 -250 117491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSGVEWK [K].gSGVEWk.[G] N-Term(TMT6plex); K7(TMT6plex) 6 E9Q616; Q6UIL4 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1;AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1 A0PJF4; E9Q616; Q6UIL4; Q8CGE7; Q8VDN3; Q8BKS2 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=2 0 2 2 0.3859 0 1 1 1 610.85608 1220.70488 1220.70394 0.77 0.00047 0/0 0 0 33852248 HCD 30 MS2 34.58215 1105.1 35.313 76.0363 23406 23406 23402 QEplus033719.raw F4 1078 1177.3 1205.2 739.7 1478.2 952.1 363 2.41 2 FALSE 0.0006035 0.008837 0.424 -250 117509 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHVAVSK [K].iHVAVSk.[K] N-Term(TMT6plex); K7(TMT6plex) 8 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; F6RSJ3; A2AT68; A0A5K1VVQ9; Q812E1; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=8; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Connectin/titin N2A-PEVK (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.5503 0 1 1 1 404.6012 1211.78904 1211.78761 1.17 0.00047 0/0 0 0 2916473.5 HCD 30 MS2 34.94928 589.6 110 76.041 23408 23408 23402 QEplus033719.raw F4 696.1 247.4 607.4 767.2 323.7 895.8 112 3.18 2 FALSE 0.0002909 0.005819 0.482 -250 117519 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSAITGPVAK [K].gSAITGPVAk.[E] N-Term(TMT6plex); K10(TMT6plex) 1 P62830 60S ribosomal protein L23 OS=Mus musculus OX=10090 GN=Rpl23 PE=1 SV=1 P62830 60S ribosomal protein L23 OS=Mus musculus OX=10090 GN=Rpl23 PE=1 SV=1 0 2 2 0.3772 0 1 1 1 679.92419 1358.84111 1358.84077 0.25 0.00017 0/0 0 0 245407312 HCD 30 MS2 30.913 2070.7 110 76.0436 23409 23409 23402 QEplus033719.raw F4 1999.2 1833.7 2256.5 1587.4 2550.9 2196.3 432 2.89 1 FALSE 1.14E-05 6.15E-05 0.897 -250 117532 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LPVAQSQK [K].lPVAQSQk.[T] N-Term(TMT6plex); K8(TMT6plex) 15 Q8CAQ8; A0A0U1RP81 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1;MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q8CAQ8-4; Q3U7N2; E9PVS5; Q8CAQ8; E9QAY6; Q8CAQ8-2; Q3TZK4; A0A0U1RP81; Q3TVZ5; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5; A0A1B0GX08 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; Isoform 4 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 0 2 2 0.3708 0 1 1 1 664.91931 1328.83135 1328.83021 0.86 0.00057 0/0 0 0 4623773.5 HCD 30 MS2 0 521.3 110 76.0486 23411 23411 23402 QEplus033719.raw F4 540.9 359.4 523.4 442.4 602.8 658.8 227 2.67 2 FALSE 1.14E-05 0.0002403 0.784 -250 117542 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYEGERPLTK [K].vYEGERPLTk.[D] N-Term(TMT6plex); K10(TMT6plex) 10 P20029 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q3U9G2; Q3U6V3; Q3TUS2; Q3UEM8; Q3U7T8; Q3TI47 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1 0 2 2 0.6503 0 1 1 1 825.48596 1649.96465 1649.96268 1.19 0.00098 0/0 0 0 4279203 HCD 30 MS2 0 251.5 110 76.0512 23412 23412 23402 QEplus033719.raw F4 271.1 215.7 280.7 225.4 259.7 256.2 442 2.86 1 FALSE 1.14E-05 9.61E-06 1.051 -250 117562 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IIAPPERK [KR].iIAPPERk.[Y] N-Term(TMT6plex); K8(TMT6plex) 32 Q3UIJ3; Q3UAF6; P62737; P68134 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1;Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1;Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1" Q8BFZ3; Q3TG92; P63268; Q3UIJ3; Q3UCF8; Q3TSB7; Q9QZ83; Q9CXK3; Q61275; Q3UAF6; Q3U122; E9Q1F2; Q3UAA9; B2RRX1; Q61272; Q3U5R4; Q3UAF7; Q99NC5; Q3TIJ9; P62737; P68134; Q61276; Q3UBP6; B1ATY1; Q3UBQ4; P68033; P63260; Q61264; Q3UA89; Q3U939; Q3UGS0; Q3U804 "Beta-actin-like protein 2 OS=Mus musculus OX=10090 GN=Actbl2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Actin, gamma-enteric smooth muscle OS=Mus musculus OX=10090 GN=Actg2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Gamma actin-like protein OS=Mus musculus OX=10090 GN=Actg1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Alpha-actin (AA 27-375) (Fragment) OS=Mus musculus OX=10090 GN=Actc1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acta2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Mus musculus OX=10090 GN=Actb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, beta OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Alpha-actin (Aa 40-375) (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Beta-actin FE-3 (Fragment) OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, aortic smooth muscle OS=Mus musculus OX=10090 GN=Acta2 PE=1 SV=1; Actin, alpha skeletal muscle OS=Mus musculus OX=10090 GN=Acta1 PE=1 SV=1; A-X actin OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Actin, alpha cardiac muscle 1 OS=Mus musculus OX=10090 GN=Actc1 PE=1 SV=1; Actin, cytoplasmic 2 OS=Mus musculus OX=10090 GN=Actg1 PE=1 SV=1; Skeletal muscle alpha-actin mRNA (Fragment) OS=Mus musculus OX=10090 GN=Acta1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actb PE=2 SV=1" 1 3 3 0.5439 0 1 1 1 461.30264 1381.89338 1381.89314 0.17 0.00008 0/0 0 0 55246240 HCD 30 MS2 9.101225 966.9 35.583 76.0607 23415 23415 23413 QEplus033719.raw F4 1055.6 774.2 1016.9 843.4 1166.3 944.7 57 3.42 4 FALSE 0.0002119 0.004414 0.516 -250 117580 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAMEDGEIDGNK [K].eAMEDGEIDGNk.[V] N-Term(TMT6plex); K12(TMT6plex) 6 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 3 3 0.8208 0 1 1 1 589.29437 1765.86856 1765.86785 0.4 0.00024 0/0 0 0 40800200 HCD 30 MS2 38.48267 752 31.381 76.0652 23417 23417 23413 QEplus033719.raw F4 729.4 652.3 805.1 498.3 1062.2 764.5 158 3.85 1 FALSE 1.14E-05 7.98E-05 0.876 -250 117600 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVAGEMGQNEPDQGGQR [R].lVAGEMGQNEPDQGGQR.[G] N-Term(TMT6plex) 4 A2AFQ2 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Mus musculus OX=10090 GN=Hsd17b10 PE=1 SV=1 O08756; Q9CYT3; A2AFQ2; Q99N15 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Mus musculus OX=10090 GN=Hsd17b10 PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsd17b10 PE=2 SV=1; 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Mus musculus OX=10090 GN=Hsd17b10 PE=1 SV=1; 17beta-hydroxysteroid dehydrogenase type 10/short chain L-3-hydroxyacyl-CoA dehydrogenase OS=Mus musculus OX=10090 GN=Hsd17b10 PE=1 SV=1 0 2 2 0.8108 0 1 1 1 1007.99567 2014.98406 2014.98137 1.33 0.00134 0/0 0 0 4479866 HCD 30 MS2 0 113.6 110 76.0728 23420 23420 23413 QEplus033719.raw F4 117.5 99.6 130 129.4 79.5 125.7 141 4.81 1 FALSE 1.14E-05 1.50E-15 2.913 -250 117610 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAGDCLDEK [K].vAGDcLDEk.[Q] N-Term(TMT6plex); C5(Carbamidomethyl); K9(TMT6plex) 2 Q922Q8 Leucine-rich repeat-containing protein 59 OS=Mus musculus OX=10090 GN=Lrrc59 PE=1 SV=1 Q3TF84; Q922Q8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Lrrc59 PE=2 SV=1; Leucine-rich repeat-containing protein 59 OS=Mus musculus OX=10090 GN=Lrrc59 PE=1 SV=1 0 2 2 0.6271 0 1 1 1 732.89124 1464.77519 1464.77685 -1.13 -0.00083 0/0 0 0 16844606 HCD 30 MS2 43.33297 993.4 110 76.0753 23421 23421 23413 QEplus033719.raw F4 947.3 939.6 1082.4 861 1076.4 1053.4 310 3.62 1 FALSE 1.14E-05 0.0001893 0.804 -250 117616 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEDTLK [K].mEDTLk.[R] N-Term(TMT6plex); K6(TMT6plex) 1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 0 2 2 0.0729 0 1 1 1 597.84332 1194.67937 1194.68043 -0.89 -0.00053 0/0 0 0 16402959 HCD 30 MS2 17.72657 1600.9 97.98 76.0776 23422 23422 23413 QEplus033719.raw F4 1781.4 1300.8 1674.7 1418.4 1696.1 1734 359 2.47 1 FALSE 0.003658 0.06986 0.088 -250 117623 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLDYGQHVVAGTPGR [R].kLDYGQHVVAGTPGR.[V] N-Term(TMT6plex); K1(TMT6plex) 5 Q91VC3 Eukaryotic initiation factor 4A-III OS=Mus musculus OX=10090 GN=Eif4a3 PE=1 SV=3 E9PV04; A2AFK7; A0A0N4SVM5; Q91VC3; A0A0N4SVP8 RNA helicase OS=Mus musculus OX=10090 GN=Eif4a3l1 PE=3 SV=2; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Eif4a3 PE=1 SV=1; RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Eif4a3l1 PE=4 SV=1; Eukaryotic initiation factor 4A-III OS=Mus musculus OX=10090 GN=Eif4a3 PE=1 SV=3; RNA helicase OS=Mus musculus OX=10090 GN=Eif4a3l2 PE=3 SV=1 1 4 4 0.5945 0 1 1 1 514.79852 2056.17226 2056.17038 0.92 0.00047 0/0 0 0 14947323 HCD 30 MS2 8.492726 422 110 76.0801 23423 23423 23413 QEplus033719.raw F4 461.6 353.7 423 378.5 464.6 450.7 392 4.39 1 FALSE 1.14E-05 2.40E-06 1.165 -250 117638 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSTPLPTVSSSAENTR [R].sSTPLPTVSSSAENTR.[Q] N-Term(TMT6plex) 10 Q3UR33; Q61033; Q61029-2 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1;Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4;Isoform Delta of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo" Q3UR33; Q3U7B3; Q61029; Q3U955; Q61033; Q61029-4; Q61033-2; Q78WP6; Q61029-3; Q61029-2 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo PE=1 SV=4; Isoform Gamma of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo; Isoform Zeta of Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus OX=10090 GN=Tmpo; LEM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tmpo PE=2 SV=1; Isoform Epsilon of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo; Isoform Delta of Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus OX=10090 GN=Tmpo" 0 3 3 0.7325 0 1 1 1 621.66052 1862.96701 1862.9657 0.7 0.00044 0/0 0 0 8620236 HCD 30 MS2 16.53114 466.1 110 76.0899 23426 23426 23424 QEplus033719.raw F4 444.6 412.6 512.4 390.5 551.6 484.7 305 5.01 3 FALSE 1.14E-05 1.53E-09 1.772 -250 117646 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMIEISR [K].sMIEISR.[T] N-Term(TMT6plex) 5 Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 Q3UJP4; E9Q133; Q3U0I3; Q3TBM6; Q3U4U6 T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cct3 PE=2 SV=1; T-complex protein 1 subunit gamma OS=Mus musculus OX=10090 GN=Cct3 PE=1 SV=1 0 2 2 0.2328 0 1 1 1 532.80243 1064.59758 1064.59715 0.41 0.00022 0/0 0 0 85790840 HCD 30 MS2 19.00533 745.9 13.002 76.0922 23427 23427 23424 QEplus033719.raw F4 782.6 596.7 894.7 568.7 741.5 890.9 264 2.32 1 FALSE 0.0006574 0.01001 0.404 -250 117653 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEQATKPSFESGR [K].vEQATkPSFESGR.[R] N-Term(TMT6plex); K6(TMT6plex) 6 Q9WV02; Q91VM5 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1;RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" A2AFI3; Q9WV02-2; A0A2I3BRL8; A2AFI4; Q9WV02; Q91VM5 "RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; Isoform 2 of RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx; Predicted gene 7324 OS=Mus musculus OX=10090 GN=Gm7324 PE=4 SV=1; RNA-binding motif protein, X chromosome (Fragment) OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; RNA-binding motif protein, X chromosome OS=Mus musculus OX=10090 GN=Rbmx PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Mus musculus OX=10090 GN=Rbmxl1 PE=2 SV=1" 0 3 3 0.6417 0 1 1 1 632.01947 1894.04386 1894.04345 0.22 0.00014 0/0 0 0 13122397 HCD 30 MS2 26.80162 1077.3 110 76.097 23429 23429 23424 QEplus033719.raw F4 1107.2 1019.6 1139.4 752.6 1442.3 1003 471 3.6 2 FALSE 1.14E-05 8.45E-10 1.821 -250 117661 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYTDNELEK [K].nYTDNELEk.[I] N-Term(TMT6plex); K9(TMT6plex) 1 P26443 "Glutamate dehydrogenase 1, mitochondrial OS=Mus musculus OX=10090 GN=Glud1 PE=1 SV=1" P26443 "Glutamate dehydrogenase 1, mitochondrial OS=Mus musculus OX=10090 GN=Glud1 PE=1 SV=1" 0 2 2 0.6735 0 1 1 1 792.41858 1583.82988 1583.83172 -1.16 -0.00092 0/0 0 0 11515361 HCD 30 MS2 11.95664 701.9 110 76.0995 23430 23430 23424 QEplus033719.raw F4 725.3 699.3 827.7 623.8 688.6 647 262 3.89 1 FALSE 1.14E-05 3.85E-06 1.126 -250 117682 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAGLLTPDPR [R].qAGLLTPDPR.[I] N-Term(TMT6plex) 3 Q9D7N3 "28S ribosomal protein S9, mitochondrial OS=Mus musculus OX=10090 GN=Mrps9 PE=1 SV=3" Q78IX0; Q9D7N3; A0A1S6GWG5 "Mrps9 protein OS=Mus musculus OX=10090 GN=Mrps9 PE=2 SV=1; 28S ribosomal protein S9, mitochondrial OS=Mus musculus OX=10090 GN=Mrps9 PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Mrps9 PE=2 SV=1" 0 2 2 0.59 0 1 1 1 648.87823 1296.74919 1296.74732 1.45 0.00094 0/0 0 0 6003941.5 HCD 30 MS2 41.88481 764.7 110 76.107 23433 23433 23424 QEplus033719.raw F4 773.9 662.2 796.7 691.6 827.1 836.5 292 2.39 1 FALSE 0.0008805 0.01225 0.37 -250 117690 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDPQNHVLYSNR [K].lDPQNHVLYSNR.[S] N-Term(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 2 2 0.6464 0 1 1 1 842.95093 1684.89458 1684.89683 -1.34 -0.00113 0/0 0 0 5115383.5 HCD 30 MS2 0 179.4 110 76.1096 23434 23434 23424 QEplus033719.raw F4 191.6 150.8 188.5 157.4 228.9 159.4 292 3.62 1 FALSE 1.14E-05 1.75E-07 1.381 -250 117697 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELGPYSSK [K].eLGPYSSk.[T] N-Term(TMT6plex); K8(TMT6plex) 4 O08529 Calpain-2 catalytic subunit OS=Mus musculus OX=10090 GN=Capn2 PE=1 SV=4 Q3U3A8; Q8BPV9; O08529; Q3U8S5 Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1; Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1; Calpain-2 catalytic subunit OS=Mus musculus OX=10090 GN=Capn2 PE=1 SV=4; Calcium-activated neutral proteinase 2 OS=Mus musculus OX=10090 GN=Capn2 PE=2 SV=1 0 2 2 0.3738 0 1 1 1 669.88745 1338.76763 1338.76694 0.51 0.00034 0/0 0 0 8665631 HCD 30 MS2 22.50454 948.3 110 76.1169 23436 23436 23435 QEplus033719.raw F4 897.4 890.2 1088.4 750.6 1117.4 945.7 364 3.13 1 FALSE 1.14E-05 0.0002634 0.776 -250 117704 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNASTDYDLSDK [K].nNASTDYDLSDk.[S] N-Term(TMT6plex); K12(TMT6plex) 7 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB15; Q99N25; Q3UB90; Q3U9L3; Q3T9U9; P27659 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Ribosomal protein L3 (Fragment) OS=Mus musculus OX=10090 GN=Rp13 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3 0 2 2 0.8186 0 1 1 1 900.95398 1800.90068 1800.90159 -0.51 -0.00046 0/0 0 0 5238304.5 HCD 30 MS2 0 407.8 110 76.1194 23437 23437 23435 QEplus033719.raw F4 378.9 346.6 468.7 366.7 440.9 444.9 190 4.08 1 FALSE 1.14E-05 3.59E-10 1.892 -250 117707 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPVIVK [K].qPVIVk.[A] N-Term(TMT6plex); K6(TMT6plex) 1 P14115 60S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5 P14115 60S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5 0 2 2 0.2244 0 1 1 1 571.38885 1141.77043 1141.7709 -0.41 -0.00023 0/0 0 0 86998072 HCD 30 MS2 18.9982 851.6 16.686 76.1217 23438 23438 23435 QEplus033719.raw F4 875.3 713 945 697.9 927.6 950.8 45 2.05 1 FALSE 0.009828 0.1926 -0.128 -250 117717 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQYEEEQEGKAELQR [R].eQYEEEQEGkAELQR.[A] N-Term(TMT6plex); K10(TMT6plex) 4 P13541; P13542 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; P13541; B1AR69; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 3 3 0.752 0 1 1 1 775.39697 2324.17636 2324.17704 -0.29 -0.00022 0/0 0 0 35255500 HCD 30 MS2 11.67158 628.5 50.539 76.1239 23439 23439 23435 QEplus033719.raw F4 769.7 60.7 458.5 1343.3 51.8 1087.1 316 4.92 2 FALSE 1.14E-05 6.31E-16 3.096 -250 117730 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYLEQPGK [R].nYLEQPGk.[E] N-Term(TMT6plex); K8(TMT6plex) 2 O55143 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2 O55143; Q5DTI2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1 0 2 2 0.5433 0 1 1 1 703.90509 1406.8029 1406.80439 -1.05 -0.00074 0/0 0 0 4115458.25 HCD 30 MS2 0 603.7 110 76.129 23441 23441 23435 QEplus033719.raw F4 550.4 577.9 693.3 503.1 674.2 623 455 3 1 FALSE 1.14E-05 0.0001711 0.812 -250 117749 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLNRPLTLSEK [K].rLNRPLTLSEk.[I] N-Term(TMT6plex); K11(TMT6plex) 2 Q99KI0 "Aconitate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Aco2 PE=1 SV=1" Q99KI0; A0A2R8VJW0 "Aconitate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Aco2 PE=1 SV=1; Aconitate hydratase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Aco2 PE=1 SV=1" 1 4 4 0.2456 0 1 1 1 447.03278 1785.10927 1785.11107 -1.01 -0.00045 0/0 0 0 8703383 HCD 30 MS2 61.41783 707.4 108.241 76.1339 23443 23443 23435 QEplus033719.raw F4 783.2 584.7 804.5 593 677.8 800.9 217 2.28 1 FALSE 0.009266 0.1705 -0.109 -250 117758 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGIPGSPGDPGK [R].dGIPGSPGDPGk.[D] N-Term(TMT6plex); K12(TMT6plex) 5 E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" A0A087WS16; Q05504; J3QQ16; O88493; E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen alpha 3 chain type VI (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Type VI collagen alpha 3 subunit OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" 0 2 2 0.662 0 1 1 1 777.93066 1554.85405 1554.85279 0.81 0.00063 0/0 0 0 7119133 HCD 30 MS2 24.23813 364.2 110 76.1364 23444 23444 23435 QEplus033719.raw F4 365.1 364.6 388.1 248 459.2 360.3 362 3.58 1 FALSE 1.14E-05 0.0001877 0.805 -250 117795 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IEGNLK [K].iEGNLk.[G] N-Term(TMT6plex); K6(TMT6plex) 5 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 A0PJF4; Q6UL10; E9Q616; Q8VDN3; Q8BKS2 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=2 0 2 2 0.2168 0 1 1 1 566.3606 1131.71391 1131.71378 0.12 0.00007 0/0 0 0 80415528 HCD 30 MS2 8.510349 1056.3 17.975 76.151 23449 23449 23446 QEplus033719.raw F4 1074.1 1072.7 1110.5 779.3 1377.8 923.3 370 2.26 1 FALSE 0.006085 0.09998 0.007 -250 117801 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDPQNHVLYSNR [K].lDPQNHVLYSNR.[S] N-Term(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 3 3 0.7062 0 1 1 1 562.30359 1684.89621 1684.89683 -0.37 -0.00021 0/0 0 0 44710168 HCD 30 MS2 28.95888 533 36.499 76.1533 23450 23450 23446 QEplus033719.raw F4 538.8 419.4 570.1 515.8 618.5 535.5 296 3.88 1 FALSE 1.14E-05 2.38E-08 1.546 -250 117808 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYTDNELEK [K].nYTDNELEk.[I] N-Term(TMT6plex); K9(TMT6plex) 1 P26443 "Glutamate dehydrogenase 1, mitochondrial OS=Mus musculus OX=10090 GN=Glud1 PE=1 SV=1" P26443 "Glutamate dehydrogenase 1, mitochondrial OS=Mus musculus OX=10090 GN=Glud1 PE=1 SV=1" 0 3 3 0.7061 0 1 1 1 528.6156 1583.83225 1583.83172 0.33 0.00018 0/0 0 0 9838848 HCD 30 MS2 0 850.2 110 76.1558 23451 23451 23446 QEplus033719.raw F4 856.4 773.2 979 735.2 879.7 877.8 256 3.3 1 FALSE 0.0002019 0.004023 0.527 -250 117837 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQYEEEQEGKAELQR [R].eQYEEEQEGkAELQR.[A] N-Term(TMT6plex); K10(TMT6plex) 4 P13541; P13542 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; P13541; B1AR69; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 4 4 0.6768 0 1 1 1 581.80029 2324.17934 2324.17704 0.99 0.00058 0/0 0 0 7473940 HCD 30 MS2 30.21651 566.2 110 76.1658 23455 23455 23446 QEplus033719.raw F4 609.1 294.9 497.9 816.1 468.7 710.4 325 4.27 2 FALSE 1.14E-05 5.32E-07 1.289 -250 117850 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLQLAIR [R].hLQLAIR.[NG] N-Term(TMT6plex) 17 Q149V4; Q8BFU2; Q3THW5; P27661 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1;Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3;Histone H2A.V OS=Mus musculus OX=10090 GN=H2az2 PE=1 SV=3;Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 Q149V4; Q8BFU2; Q3THW5; C0HKE5; P0C0S6; Q8CGP5; A0AUV1; Q8CGP4; Q3TFU6; Q8R1M2; Q8R029; P27661; A0A0N4SV66; Q64426; Q8CGP7; Q8CGP6; Q6GSS7 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1; Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3; Histone H2A.V OS=Mus musculus OX=10090 GN=H2az2 PE=1 SV=3; Histone H2A type 1-G OS=Mus musculus OX=10090 GN=H2ac11 PE=1 SV=1; Histone H2A.Z OS=Mus musculus OX=10090 GN=H2az1 PE=1 SV=2; Histone H2A type 1-F OS=Mus musculus OX=10090 GN=Hist1h2af PE=1 SV=3; Histone H2A (Fragment) OS=Mus musculus OX=10090 GN=H2ac12 PE=2 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2ac1 PE=1 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2az1 PE=2 SV=1; Histone H2A.J OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2az2 PE=2 SV=1; Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2; Histone H2A OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A (Fragment) OS=Mus musculus domesticus OX=10092 GN=H2A PE=2 SV=1; Histone H2A type 1-K OS=Mus musculus OX=10090 GN=H2ac15 PE=1 SV=3; Histone H2A type 1-H OS=Mus musculus OX=10090 GN=H2ac12 PE=1 SV=3; Histone H2A type 2-A OS=Mus musculus OX=10090 GN=Hist2h2aa1 PE=1 SV=3 0 2 2 0.0777 0 1 1 1 540.34833 1079.68938 1079.68868 0.65 0.00035 0/0 0 0 144720128 HCD 30 MS2 3.200191 620.4 8.663 76.1756 23458 23458 23457 QEplus033719.raw F4 564.2 619.1 722.6 459.2 732.9 624.4 20 2.06 4 FALSE 0.002611 0.05177 0.137 -250 117869 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQIALK [K].sQIALk.[EL] N-Term(TMT6plex); K6(TMT6plex) 2 P14152 "Malate dehydrogenase, cytoplasmic OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=3" P14152; A0A5F8MPN8 "Malate dehydrogenase, cytoplasmic OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=3; Malate dehydrogenase OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=1" 0 3 3 0.149 0 1 1 1 373.24982 1117.7349 1117.73452 0.34 0.00013 0/0 0 0 6079299.5 HCD 30 MS2 43.74781 250.1 110 76.1852 23462 23462 23457 QEplus033719.raw F4 240.4 186.3 248.5 295.2 245.8 284.4 179 2.08 1 FALSE 0.00592 0.09839 0.011 -250 117870 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQLALK [K].sQLALk.[EL] N-Term(TMT6plex); K6(TMT6plex) 5 Q99KF2; Q6A078-2; Q6A078; E9Q9M0; A0A1W2P6U7 Cep290 protein (Fragment) OS=Mus musculus OX=10090 GN=Cep290 PE=2 SV=2; Isoform 2 of Centrosomal protein of 290 kDa OS=Mus musculus OX=10090 GN=Cep290; Centrosomal protein of 290 kDa OS=Mus musculus OX=10090 GN=Cep290 PE=1 SV=2; Centrosomal protein of 290 kDa OS=Mus musculus OX=10090 GN=Cep290 PE=1 SV=1; Centrosomal protein of 290 kDa (Fragment) OS=Mus musculus OX=10090 GN=Cep290 PE=4 SV=1 0 3 3 0.149 0 1 2 2 373.24982 1117.7349 1117.73452 0.34 0.00013 0/0 0 0 6079299.5 HCD 30 MS2 43.74781 250.1 110 76.1852 23462 23462 23457 QEplus033719.raw F4 240.4 186.3 248.5 295.2 245.8 284.4 179 2.08 1 FALSE 0.00592 0.09839 0.011 -250 117879 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAQQAASSSGQGQQAQTPTGF [K].aAQQAASSSGQGQQAQTPTGF.[-] N-Term(TMT6plex) 4 Q8BK63-2 Isoform 2 of Casein kinase I isoform alpha OS=Mus musculus OX=10090 GN=Csnk1a1 Q3U844; Q3TVX1; E9Q2U6; Q8BK63-2 Protein kinase domain-containing protein OS=Mus musculus OX=10090 GN=Csnk1a1 PE=2 SV=1; Protein kinase domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Csnk1a1 PE=2 SV=1; Casein kinase I isoform alpha OS=Mus musculus OX=10090 GN=Csnk1a1 PE=1 SV=1; Isoform 2 of Casein kinase I isoform alpha OS=Mus musculus OX=10090 GN=Csnk1a1 0 3 3 0.8192 0 1 1 1 750.70313 2250.09482 2250.09482 0 0 0/0 0 0 5392499 HCD 30 MS2 0 95.1 110 76.1877 23463 23463 23457 QEplus033719.raw F4 89.4 84.4 99.4 93.1 95.1 109.3 158 6.25 1 FALSE 1.14E-05 2.23E-14 2.691 -250 117885 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MLHSLK [K].mLHSLk.[T] N-Term(TMT6plex); K6(TMT6plex) 4 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; A0A571BF46; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 3 3 0.2129 0 1 1 1 396.25113 1186.73883 1186.73822 0.52 0.0002 0/0 0 0 4701784 HCD 30 MS2 46.73205 452.6 110 76.1902 23464 23464 23457 QEplus033719.raw F4 459.2 208.4 461 503.1 304.1 779.8 223 2.49 1 FALSE 0.0008991 0.01244 0.367 -250 117912 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEIIANDQGNR [RK].vEIIANDQGNR.[IT] N-Term(TMT6plex) 32 P20029; Q3TEK2; B7U582; P17879 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3;Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1;Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1;Heat shock 70 kDa protein 1B OS=Mus musculus OX=10090 GN=Hspa1b PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q61696; Q3TRH3; Q3UDS0; Q3TEK2; Q3U9G2; Q3U9L2; Q3U6V3; D3Z5E2; Q3UEM8; Q3TAI8; O88687; Q3TH56; B7U582; Q9R2A1; Q3TZJ3; P63017; A1E2B8; Q3U7T8; P16627; Q3TQ13; Q3TB63; Q504P4; B2CSK2; P17879; Q3TI47; Q3UBA6; Q3TF16; P17156 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Heat shock 70 kDa protein 1A OS=Mus musculus OX=10090 GN=Hspa1a PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Heat shock cognate 71 kDa protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Heat shock protein 70 (Fragment) OS=Mus musculus OX=10090 GN=Hsp70.3 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1; Spermatid-specific heat shock protein 70 (Fragment) OS=Mus musculus OX=10090 GN=Hsc70t PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Inducible heat shock protein 70 OS=Mus musculus OX=10090 PE=3 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Heat shock 70 kDa protein 1-like OS=Mus musculus OX=10090 GN=Hspa1l PE=1 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Heat shock protein 1-like protein OS=Mus musculus OX=10090 PE=3 SV=1; Heat shock 70 kDa protein 1B OS=Mus musculus OX=10090 GN=Hspa1b PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Mus musculus OX=10090 GN=Hspa2 PE=1 SV=2 0 2 2 0.7236 0 1 1 1 729.39954 1457.7918 1457.79097 0.57 0.00041 0/0 0 0 356582944 HCD 30 MS2 3.370672 413.2 5.359 76.205 23469 23469 23468 QEplus033719.raw F4 402.8 326.5 475.6 350.6 408.7 514.7 304 3.51 4 FALSE 1.14E-05 2.79E-07 1.343 -250 117931 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYLEQPGK [R].nYLEQPGk.[E] N-Term(TMT6plex); K8(TMT6plex) 2 O55143 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2 O55143; Q5DTI2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1 0 3 3 0.6522 0 1 1 1 469.60666 1406.80542 1406.80439 0.74 0.00035 0/0 0 0 17151218 HCD 30 MS2 33.44356 768.7 87.057 76.2095 23471 23471 23468 QEplus033719.raw F4 700.9 644.7 895.9 595.6 869.8 905.1 493 2.76 1 FALSE 0.00198 0.03434 0.197 -250 117938 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADIAESQVNK [R].aDIAESQVNk.[L] N-Term(TMT6plex); K10(TMT6plex) 20 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; Q56A77; Q9ESW6; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; B2RWX0; B2RQQ1; Q3UW38; A0A2I3BPY4; B1AR69; B2RY26; Q9WUS6; Q9WUS8; B2RXX9; Q3TT35; P13542; Q9JHR4 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myh4 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myosin_tail_1 domain-containing protein OS=Mus musculus OX=10090 GN=Myh13 PE=2 SV=1; Myosin-6 (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin heavy chain 2X (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Slow myosin heavy chain-beta (Fragment) OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2; Myosin heavy chain IIB (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1" 0 3 3 0.5522 0 1 1 1 511.62772 1532.86859 1532.86844 0.1 0.00005 0/0 0 0 13286013 HCD 30 MS2 29.86709 932.7 105.14 76.2119 23472 23472 23468 QEplus033719.raw F4 1143.4 454.4 741.3 1322.7 659.2 1275.4 488 3.35 5 FALSE 1.14E-05 2.79E-05 0.963 -250 117944 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPVIVK [K].qPVIVk.[A] N-Term(TMT6plex); K6(TMT6plex) 1 P14115 60S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5 P14115 60S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5 0 3 3 0.3604 0 1 1 1 381.26245 1141.7728 1141.7709 1.66 0.00063 0/0 0 0 4492333 HCD 30 MS2 48.72041 312.2 110 76.2144 23473 23473 23468 QEplus033719.raw F4 335.4 235.1 355.8 262.5 328.9 355.6 96 2.22 1 FALSE 0.006267 0.1015 0.002 -250 117954 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FDSSLDRK [K].fDSSLDRk.[D] N-Term(TMT6plex); K8(TMT6plex) 3 P30416 Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=5 F7CAT1; P30416; F6S2D5 Peptidylprolyl isomerase (Fragment) OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=2; Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=5; Peptidylprolyl isomerase (Fragment) OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=9 1 3 3 0.5259 0 1 1 1 475.94193 1425.81122 1425.8102 0.72 0.00034 0/0 0 0 11245035 HCD 30 MS2 5.306288 1216.6 110 76.2169 23474 23474 23468 QEplus033719.raw F4 1294.3 971.9 1259.6 843.3 1471.3 1459.2 331 2.7 1 FALSE 0.003329 0.06462 0.102 -250 117961 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADIAESQVNK [R].aDIAESQVNk.[L] N-Term(TMT6plex); K10(TMT6plex) 20 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; Q56A77; Q9ESW6; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; B2RWX0; B2RQQ1; Q3UW38; A0A2I3BPY4; B1AR69; B2RY26; Q9WUS6; Q9WUS8; B2RXX9; Q3TT35; P13542; Q9JHR4 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myh4 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin heavy chain IIX (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myosin_tail_1 domain-containing protein OS=Mus musculus OX=10090 GN=Myh13 PE=2 SV=1; Myosin-6 (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin heavy chain 2X (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Slow myosin heavy chain-beta (Fragment) OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2; Myosin heavy chain IIB (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1" 0 2 2 0.5457 0 1 1 1 766.9386 1532.86992 1532.86844 0.96 0.00074 0/0 0 0 10710250 HCD 30 MS2 0 752.3 110 76.2194 23475 23475 23468 QEplus033719.raw F4 961.5 174 530.8 1446.3 308.8 1092.4 487 4.05 5 FALSE 1.14E-05 1.66E-08 1.575 -250 117985 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FNQVESDK [K].fNQVESDk.[L] N-Term(TMT6plex); K8(TMT6plex) 4 Q3UM52 Polypeptide N-acetylgalactosaminyltransferase (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 Q3UM52; Q6PB93-2; Q6PB93; Q3UA32 Polypeptide N-acetylgalactosaminyltransferase (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Isoform 2 of Polypeptide N-acetylgalactosaminyltransferase 2 OS=Mus musculus OX=10090 GN=Galnt2; Polypeptide N-acetylgalactosaminyltransferase 2 OS=Mus musculus OX=10090 GN=Galnt2 PE=1 SV=1; Polypeptide N-acetylgalactosaminyltransferase (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.5204 0 1 1 1 712.8949 1424.78252 1424.77857 2.77 0.00198 0/0 0 0 7550800 HCD 30 MS2 16.43076 533.6 110 76.227 23478 23478 23468 QEplus033719.raw F4 495.8 398.9 574 494.2 607.4 631.2 370 2.69 1 FALSE 1.14E-05 0.0008845 0.673 -250 117998 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TFQDCYSSK [R].tFQDcYSSk.[F] N-Term(TMT6plex); C5(Carbamidomethyl); K9(TMT6plex) 2 Q8BH95 "Enoyl-CoA hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Echs1 PE=1 SV=1" Q8BU95; Q8BH95 "Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Enoyl-CoA hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Echs1 PE=1 SV=1" 0 2 2 0.7221 0 1 1 1 797.40466 1593.80205 1593.79831 2.34 0.00187 0/0 0 0 5900275 HCD 30 MS2 0 452 110 76.2368 23481 23481 23479 QEplus033719.raw F4 456.8 418 529.3 408.7 487.1 412.1 179 4.21 1 FALSE 1.14E-05 1.52E-06 1.203 -250 118022 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVVVCPK [K].aVVVcPk.[D] N-Term(TMT6plex); C5(Carbamidomethyl); K7(TMT6plex) 9 Q8C290 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1 Q8C290; Q8VEK3-2; Q3ULH5; Q3TVV6; Q3TXW2; Q3TGN5; O88568; Q3TWN5; Q8VEK3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; B30.2/SPRY domain-containing protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Heterogenous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpu PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=1 SV=1 0 3 3 0.5148 0 1 1 1 410.92728 1230.76728 1230.76444 2.31 0.00095 0/0 0 0 21748030 HCD 30 MS2 35.68095 894.2 58.918 76.2436 23484 23484 23479 QEplus033719.raw F4 802.6 646 977.1 597.6 1072.9 1268.9 447 2.7 1 FALSE 0.002064 0.03759 0.183 -250 118030 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLIEGK [K].gLIEGk.[S] N-Term(TMT6plex); K6(TMT6plex) 2 Q3U7R1 Extended synaptotagmin-1 OS=Mus musculus OX=10090 GN=Esyt1 PE=1 SV=2 Q3U7R1; Q3U7R1-2 Extended synaptotagmin-1 OS=Mus musculus OX=10090 GN=Esyt1 PE=1 SV=2; Isoform 2 of Extended synaptotagmin-1 OS=Mus musculus OX=10090 GN=Esyt1 0 2 2 0.0886 0 1 1 3 537.85065 1074.69402 1074.69232 1.58 0.00085 0/0 0 0 18605178 HCD 30 MS2 41.13816 1117.1 62.162 76.2458 23485 23485 23479 QEplus033719.raw F4 1100.8 906.8 1244.9 955.5 1205.4 1289.2 151 2.37 1 FALSE 0.002225 0.04295 0.164 -250 118046 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YELTGK [K].yELTGk.[F] N-Term(TMT6plex); K6(TMT6plex) 8 P14824; Q99JX6 Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3;Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 Q3V2Z4; P14824; F8WIT2; Q3UI56; Q3TUI1; Q8CEX0; Q99JX6; Q3UDK4 Annexin OS=Mus musculus OX=10090 PE=2 SV=1; Annexin A6 OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=3; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa6 PE=2 SV=1 0 2 2 0.2588 0 1 1 1 584.85333 1168.69939 1168.6978 1.36 0.0008 0/0 0 0 9546338 HCD 30 MS2 43.53695 1468.7 110 76.2509 23487 23487 23479 QEplus033719.raw F4 1662.7 1169 1559.2 1192.1 1709.8 1519.7 213 2.28 2 FALSE 0.002413 0.04779 0.149 -250 118072 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPNVDIK [K].gPNVDIk.[A] N-Term(TMT6plex); K7(TMT6plex) 3 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 Q6UL10; E9Q616; Q61484 AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; Desmoyokin (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1 0 2 2 0.4292 0 1 1 1 600.87195 1200.73662 1200.73524 1.15 0.00069 0/0 0 0 21967344 HCD 30 MS2 46.87856 1166.4 42.303 76.2654 23492 23492 23490 QEplus033719.raw F4 1192.4 1008 1264.9 901.5 1310 1321.8 288 2.12 1 FALSE 0.003809 0.07209 0.082 -250 118078 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGVVGIK [K].gGVVGIk.[V] N-Term(TMT6plex); K7(TMT6plex) 11 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 A0A0U1RPT5; Q9CPQ9; D3YWI1; A0A0U1RPN8; A6ZI47; D3YV98; A6ZI46; D3Z510; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart2 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=2; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 0 2 2 0.3116 0 1 1 1 544.36591 1087.72453 1087.72395 0.54 0.00029 0/0 0 0 160761376 HCD 30 MS2 26.46555 1248.9 8.105 76.2677 23493 23493 23490 QEplus033719.raw F4 1535.5 699.7 1240.7 1447.3 977.8 1592.7 89 2.15 1 FALSE 0.00155 0.02341 0.255 -250 118088 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RILMEHIHK [K].rILMEHIHk.[L] N-Term(TMT6plex); K9(TMT6plex) 2 Q5I0T8 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 Q5I0T8; A2A547 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1; Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 1 4 4 0.5466 0 1 1 1 409.50415 1634.99477 1634.99287 1.16 0.00047 0/0 0 0 25511610 HCD 30 MS2 46.13588 865.1 57.706 76.2722 23495 23495 23490 QEplus033719.raw F4 876.3 566.3 1046.9 512.9 812.2 1376.2 378 4.08 1 FALSE 5.44E-05 0.002168 0.591 -250 118094 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAQYESK [R].lAQYESk.[K] N-Term(TMT6plex); K7(TMT6plex) 2 O70251 Elongation factor 1-beta OS=Mus musculus OX=10090 GN=Eef1b PE=1 SV=5 A0A087WS46; O70251 Eukaryotic translation elongation factor 1 beta 2 OS=Mus musculus OX=10090 GN=Eef1b2 PE=1 SV=1; Elongation factor 1-beta OS=Mus musculus OX=10090 GN=Eef1b PE=1 SV=5 0 2 2 0.1075 0 1 1 1 648.8822 1296.75713 1296.75637 0.58 0.00038 0/0 0 0 16786970 HCD 30 MS2 29.50379 1418.8 110 76.2747 23496 23496 23490 QEplus033719.raw F4 1486.2 1242.1 1538.5 1233.3 1435.3 1577.7 333 2.79 1 FALSE 0.0004793 0.007665 0.445 -250 118103 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STMNFK [R].sTMNFk.[I] N-Term(TMT6plex); K6(TMT6plex) 2 P97807 "Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh PE=1 SV=3" P97807; P97807-2 "Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh PE=1 SV=3; Isoform Cytoplasmic of Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh" 0 2 2 0.405 0 1 1 1 593.33868 1185.67009 1185.6702 -0.09 -0.00005 0/0 0 0 9760345 HCD 30 MS2 9.927873 1182.5 110 76.2772 23497 23497 23490 QEplus033719.raw F4 1276.4 976.5 1241.4 1122.5 1229.8 1248.2 224 2.42 1 FALSE 0.00656 0.1047 -0.006 -250 118117 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTVDLSSHLAK [K].rTVDLSSHLAk.[V] N-Term(TMT6plex); K11(TMT6plex) 5 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q91YQ5; Q5RKP4; A0A0N4SUJ8; Q3U900; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 1 4 4 0.6634 0 1 1 1 422.0079 1685.00979 1685.01102 -0.73 -0.00031 0/0 0 0 7816198.5 HCD 30 MS2 29.80137 548.6 110 76.2822 23499 23499 23490 QEplus033719.raw F4 628.3 436.4 536.9 475.2 799.9 414.7 322 4.04 1 FALSE 1.14E-05 1.48E-06 1.205 -250 118130 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTQDAVAK [R].lTQDAVAk.[A] N-Term(TMT6plex); K8(TMT6plex) 1 Q4VA29 "RNA transcription, translation and transport factor protein OS=Mus musculus OX=10090 GN=Rtraf PE=1 SV=1" Q4VA29 "RNA transcription, translation and transport factor protein OS=Mus musculus OX=10090 GN=Rtraf PE=1 SV=1" 0 2 2 0.4058 0 1 1 1 652.40344 1303.79961 1303.79857 0.79 0.00052 0/0 0 0 14002045 HCD 30 MS2 24.0408 1037.4 110 76.292 23502 23502 23501 QEplus033719.raw F4 1043.2 921.5 1121.8 843.6 1143.6 1150.7 547 3.13 1 FALSE 1.14E-05 7.72E-05 0.879 -250 118154 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VPVHDVTDASK [K].vPVHDVTDASk.[V] N-Term(TMT6plex); K11(TMT6plex) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.731 0 1 1 1 813.46887 1625.93047 1625.92629 2.57 0.00209 0/0 0 0 8233015 HCD 30 MS2 9.881909 302.1 110 76.2993 23505 23505 23501 QEplus033719.raw F4 320.1 287.7 325.8 196 426 256.7 409 3.94 1 FALSE 1.14E-05 5.55E-09 1.666 -250 118183 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGVVGIK [K].gGVVGIk.[V] N-Term(TMT6plex); K7(TMT6plex) 11 A6ZI44 Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 A0A0U1RPT5; Q9CPQ9; D3YWI1; A0A0U1RPN8; A6ZI47; D3YV98; A6ZI46; D3Z510; Q6NY00; A6ZI44; Q5FWB7 Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=8; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart2 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoart1 PE=1 SV=1; Fructose-bisphosphate aldolase (Fragment) OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=2; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=2 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1; Fructose-bisphosphate aldolase OS=Mus musculus OX=10090 GN=Aldoa PE=1 SV=1 0 3 3 0.2716 0 1 1 1 363.24594 1087.72327 1087.72395 -0.63 -0.00023 0/0 0 0 3347069.75 HCD 30 MS2 51.35292 408.8 110 76.3093 23509 23509 23501 QEplus033719.raw F4 476.1 206.7 390.9 482.8 324.8 571.6 56 2.32 1 FALSE 0.003159 0.06174 0.109 -250 118205 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STDPTMIK [R].sTDPTMIk.[T] N-Term(TMT6plex); K8(TMT6plex) 3 Q9Z1T1 AP-3 complex subunit beta-1 OS=Mus musculus OX=10090 GN=Ap3b1 PE=1 SV=2 Q9Z1T1; Q3UPG0; Q3TQ33 AP-3 complex subunit beta-1 OS=Mus musculus OX=10090 GN=Ap3b1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ap3b1 PE=2 SV=1; Adaptin_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ap3b1 PE=2 SV=1 0 2 2 0.476 0 1 1 1 675.8894 1350.77153 1350.77031 0.91 0.00061 0/0 0 0 10548338 HCD 30 MS2 17.56515 767 110 76.3214 23513 23513 23512 QEplus033719.raw F4 769.9 712 811 578.4 952.2 778.5 436 2.5 1 FALSE 0.0006216 0.009202 0.418 -250 118213 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAGSLLTDECR [R].aAGSLLTDEcR.[T] N-Term(TMT6plex); C10(Carbamidomethyl) 1 Q922B1 ADP-ribose glycohydrolase MACROD1 OS=Mus musculus OX=10090 GN=Macrod1 PE=1 SV=2 Q922B1 ADP-ribose glycohydrolase MACROD1 OS=Mus musculus OX=10090 GN=Macrod1 PE=1 SV=2 0 2 2 0.7743 0 1 1 1 711.36694 1421.72661 1421.72559 0.71 0.00051 0/0 0 0 8274834 HCD 30 MS2 0 334.2 110 76.3239 23514 23514 23512 QEplus033719.raw F4 359.1 199.2 342.7 385.4 268.6 450 216 3.81 1 FALSE 1.14E-05 3.08E-09 1.714 -250 118241 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LPVAQSQK [K].lPVAQSQk.[T] N-Term(TMT6plex); K8(TMT6plex) 15 Q8CAQ8; A0A0U1RP81 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1;MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q8CAQ8-4; Q3U7N2; E9PVS5; Q8CAQ8; E9QAY6; Q8CAQ8-2; Q3TZK4; A0A0U1RP81; Q3TVZ5; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5; A0A1B0GX08 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; Isoform 4 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 0 2 2 0.3034 0 1 1 1 664.92322 1328.83916 1328.83021 6.74 0.00448 0/0 0 0 16002516 HCD 30 MS2 38.53964 992.7 78.289 76.333 23518 23518 23512 QEplus033719.raw F4 1025.1 680.5 1059.2 1058.3 829.4 1303.6 180 2.34 2 FALSE 1.14E-05 0.0002786 0.772 -250 118251 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSSLEEMTQR [K].tSSLEEMTQR.[L] N-Term(TMT6plex) 14 B1ARU4; F7ACR9; A0A571BGC6 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1;Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 Q9QXZ0-3; B1ARU4; E9QA63; E9QNP1; F7ACR9; Q9QXZ0-2; Q9QXZ0-4; A0A571BGC6; Q9QXZ0; A0A0A0MQA6; A0A571BF93; F6Q750; E9PVY8; Q8C8N4 Isoform 3 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Isoform 2 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Isoform 4 of Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Macf1 PE=2 SV=1 0 2 2 0.7187 0 1 1 1 705.85858 1410.70989 1410.70961 0.2 0.00014 0/0 0 0 9606274 HCD 30 MS2 0 654.8 110 76.3355 23519 23519 23512 QEplus033719.raw F4 653 367.2 761.9 698.2 492.3 956.3 141 3.91 3 FALSE 1.14E-05 9.82E-07 1.239 -250 118262 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQTAVSQQPNK [K].lQTAVSQQPNk.[D] N-Term(TMT6plex); K11(TMT6plex) 33 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 2 2 0.5561 0 1 1 1 836.49365 1671.98003 1671.97939 0.38 0.00032 0/0 0 0 2823097.5 HCD 30 MS2 0 248.4 110 76.3405 23521 23521 23512 QEplus033719.raw F4 237.5 198.1 299.7 193.2 264.8 297.1 362 4.1 1 FALSE 1.14E-05 7.80E-09 1.638 -250 118282 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVTIMPK [K].rVTIMPk.[D] N-Term(TMT6plex); K7(TMT6plex) 8 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 1 3 3 0.514 0 1 1 1 434.9494 1302.83365 1302.83318 0.36 0.00016 0/0 0 0 42473236 HCD 30 MS2 29.16893 553.6 27.242 76.3503 23524 23524 23523 QEplus033719.raw F4 554.4 590.2 633.4 310.8 739.8 492.9 282 2.86 2 FALSE 0.0008268 0.01138 0.382 -250 118297 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVDGLSK [K].aAVDGLSk.[M] N-Term(TMT6plex); K8(TMT6plex) 2 Q8R010 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 OS=Mus musculus OX=10090 GN=Aimp2 PE=1 SV=2 Q8R3V2; Q8R010 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 OS=Mus musculus OX=10090 GN=Aimp2 PE=1 SV=1; Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 OS=Mus musculus OX=10090 GN=Aimp2 PE=1 SV=2 0 2 2 0.2988 0 1 1 1 609.87683 1218.74639 1218.74581 0.47 0.00029 0/0 0 0 38354520 HCD 30 MS2 18.78894 1497.2 55.264 76.3574 23527 23527 23523 QEplus033719.raw F4 1584.4 1263.2 1579.8 1227.8 1705.5 1622.5 571 3.28 1 FALSE 1.14E-05 5.18E-05 0.912 -250 118324 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDPQNHVLYSNR [K].lDPQNHVLYSNR.[S] N-Term(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 3 3 0.5784 0 1 1 1 562.30048 1684.88687 1684.89683 -5.91 -0.00332 0/0 0 0 16612158 HCD 30 MS2 62.97506 1007.1 51.673 76.3694 23532 23532 23523 QEplus033719.raw F4 1114.1 808.5 1073.9 762.5 1138.2 1145.5 290 2.87 1 FALSE 0.0004091 0.007307 0.452 -250 118342 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CLPTPK [R].cLPTPk.[C] N-Term(TMT6plex); C1(Carbamidomethyl); K6(TMT6plex) 4 P62717 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1 A0A1D5RMC7; A0A1D5RM79; A0A1D5RM85; P62717 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a (Fragment) OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1 0 3 3 0.3717 0 1 1 1 391.90677 1173.70575 1173.70659 -0.71 -0.00028 0/0 0 0 6553388 HCD 30 MS2 26.43449 354.3 110 76.3792 23535 23535 23534 QEplus033719.raw F4 346.1 280.4 394.1 280.4 390.8 433.7 263 2.26 1 FALSE 0.002173 0.04162 0.169 -250 118348 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGCEALMNK [R].qGcEALMNk.[F] N-Term(TMT6plex); C3(Carbamidomethyl); K9(TMT6plex) 5 Q810L8; Q9JIP6 Fzd7 protein (Fragment) OS=Mus musculus OX=10090 GN=Fzd7 PE=2 SV=1;Frizzled-2 OS=Mus musculus OX=10090 GN=Fzd2 PE=2 SV=1 O70421; Q810L8; Q61090; Q9JIP6; Q6P551 Frizzled-1 OS=Mus musculus OX=10090 GN=Fzd1 PE=1 SV=3; Fzd7 protein (Fragment) OS=Mus musculus OX=10090 GN=Fzd7 PE=2 SV=1; Frizzled-7 OS=Mus musculus OX=10090 GN=Fzd7 PE=1 SV=2; Frizzled-2 OS=Mus musculus OX=10090 GN=Fzd2 PE=2 SV=1; Frizzled homolog 7 (Drosophila) OS=Mus musculus OX=10090 GN=Fzd7 PE=2 SV=1 0 2 2 0.6701 0 1 1 1 754.9024 1508.79753 1508.79654 0.66 0.0005 0/0 0 0 4705275.5 HCD 30 MS2 0 410.6 110 76.3818 23536 23536 23534 QEplus033719.raw F4 399.8 388.7 465.1 292.2 504.1 413.4 268 2.94 2 FALSE 1.14E-05 5.43E-06 1.098 -250 118369 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVFDANNK [K].aVFDANNk.[D] N-Term(TMT6plex); K8(TMT6plex) 6 Q5SSL4 Active breakpoint cluster region-related protein OS=Mus musculus OX=10090 GN=Abr PE=1 SV=1 Q5SSL4; Q5SSL4-2; A0A571BG95; Q5SSL4-4; E9PUE7; Q5SSL4-3 Active breakpoint cluster region-related protein OS=Mus musculus OX=10090 GN=Abr PE=1 SV=1; Isoform 2 of Active breakpoint cluster region-related protein OS=Mus musculus OX=10090 GN=Abr; Active breakpoint cluster region-related protein OS=Mus musculus OX=10090 GN=Abr PE=1 SV=1; Isoform 4 of Active breakpoint cluster region-related protein OS=Mus musculus OX=10090 GN=Abr; Active breakpoint cluster region-related protein OS=Mus musculus OX=10090 GN=Abr PE=1 SV=1; Isoform 3 of Active breakpoint cluster region-related protein OS=Mus musculus OX=10090 GN=Abr 0 2 2 0.3801 0 1 1 1 668.8822 1336.75713 1336.76252 -4.03 -0.0027 0/0 0 0 8229555.5 HCD 30 MS2 32.11235 823.7 110 76.3891 23539 23539 23534 QEplus033719.raw F4 834.5 708.2 899.2 660.4 963 877.1 443 2.21 1 FALSE 1.14E-05 0.00089 0.672 -250 118378 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPGWDLQR [K].gPGWDLQR.[E] N-Term(TMT6plex) 2 Q9JLI8 Squamous cell carcinoma antigen recognized by T-cells 3 OS=Mus musculus OX=10090 GN=Sart3 PE=1 SV=1 Q9JLI8; Q9JLI8-2 Squamous cell carcinoma antigen recognized by T-cells 3 OS=Mus musculus OX=10090 GN=Sart3 PE=1 SV=1; Isoform 2 of Squamous cell carcinoma antigen recognized by T-cells 3 OS=Mus musculus OX=10090 GN=Sart3 0 2 2 0.4724 0 1 1 1 579.31726 1157.62724 1157.62647 0.67 0.00039 0/0 0 0 5476500 HCD 30 MS2 0 702 110 76.3916 23540 23540 23534 QEplus033719.raw F4 717 613.9 740.3 612.9 722.2 805.4 151 2.54 1 FALSE 0.0002419 0.004847 0.505 -250 118386 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSADSLPGPISR [R].sSADSLPGPISR.[Q] N-Term(TMT6plex) 4 Q91W39 Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1 Q8BX12; Q69ZE0; Q91W39; B7ZC23 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ncoa5 PE=2 SV=1; MKIAA1637 protein (Fragment) OS=Mus musculus OX=10090 GN=Ncoa5 PE=2 SV=1; Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1; Nuclear receptor coactivator 5 OS=Mus musculus OX=10090 GN=Ncoa5 PE=1 SV=1 0 2 2 0.6117 0 1 1 1 708.39032 1415.77336 1415.76917 2.96 0.00209 0/0 0 0 4338994 HCD 30 MS2 17.33884 451.4 110 76.3941 23541 23541 23534 QEplus033719.raw F4 465.3 348.8 520.1 458.1 407.1 508.9 294 3.09 1 FALSE 1.14E-05 8.88E-07 1.247 -250 118422 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGLIIR [RK].dGLIIR.[FK] N-Term(TMT6plex) 2 Q5I0T8 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 Q5I0T8; A2A547 Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1; Ribosomal protein L19 OS=Mus musculus OX=10090 GN=Rpl19 PE=1 SV=1 0 2 2 0.0398 0 1 1 3 458.29507 915.58287 915.58248 0.43 0.00019 0/0 0 0 135144608 HCD 30 MS2 22.19881 579.7 8.493 76.4087 23546 23546 23545 QEplus033719.raw F4 595.9 499.4 605.5 482.1 693.9 601.4 154 2.26 1 FALSE 0.003624 0.06948 0.089 -250 118423 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGLLLR [RK].dGLLLR.[FK] N-Term(TMT6plex) 2 A0JNY9; O70372 Telomerase reverse transcriptase OS=Mus musculus OX=10090 GN=Tert PE=2 SV=1; Telomerase reverse transcriptase OS=Mus musculus OX=10090 GN=Tert PE=1 SV=1 0 2 2 0.0398 0 1 2 4 458.29507 915.58287 915.58248 0.43 0.00019 0/0 0 0 135144608 HCD 30 MS2 22.19881 579.7 8.493 76.4087 23546 23546 23545 QEplus033719.raw F4 595.9 499.4 605.5 482.1 693.9 601.4 154 2.26 1 FALSE 0.003624 0.06948 0.089 -250 118436 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELSEALTR [K].eLSEALTR.[N] N-Term(TMT6plex) 1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 0 2 2 0.163 0 1 1 1 574.33051 1147.65373 1147.65202 1.49 0.00086 0/0 0 0 27734332 HCD 30 MS2 43.43118 837.1 31.108 76.4135 23548 23548 23545 QEplus033719.raw F4 938.8 529.7 809.1 1034.9 703.3 1007.1 257 2.76 1 FALSE 1.14E-05 0.0007546 0.687 -250 118459 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGYVEVSGK [K].dGYVEVSGk.[H] N-Term(TMT6plex); K9(TMT6plex) 1 Q9JK92 Heat shock protein beta-8 OS=Mus musculus OX=10090 GN=Hspb8 PE=1 SV=1 Q9JK92 Heat shock protein beta-8 OS=Mus musculus OX=10090 GN=Hspb8 PE=1 SV=1 0 2 2 0.6267 0 1 1 1 706.39563 1411.78398 1411.78332 0.47 0.00033 0/0 0 0 5114134.5 HCD 30 MS2 41.74009 604 110 76.4206 23551 23551 23545 QEplus033719.raw F4 618.2 361.5 675.7 643.8 479.3 845.8 298 3.75 1 FALSE 1.14E-05 4.44E-06 1.114 -250 118473 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQDVTDDHIR [R].lQDVTDDHIR.[M] N-Term(TMT6plex) 3 Q923D2 Flavin reductase (NADPH) OS=Mus musculus OX=10090 GN=Blvrb PE=1 SV=3 Q923D2; E9PZC3; E9PZC4 Flavin reductase (NADPH) OS=Mus musculus OX=10090 GN=Blvrb PE=1 SV=3; Flavin reductase (NADPH) OS=Mus musculus OX=10090 GN=Blvrb PE=1 SV=1; Flavin reductase (NADPH) OS=Mus musculus OX=10090 GN=Blvrb PE=1 SV=1 0 2 2 0.5897 0 1 1 1 720.88647 1440.76567 1440.76442 0.87 0.00063 0/0 0 0 4037101.25 HCD 30 MS2 23.90831 370 110 76.4256 23553 23553 23545 QEplus033719.raw F4 372.6 332.2 403.5 342.4 364.4 404.6 289 3.29 1 FALSE 1.14E-05 1.36E-05 1.022 -250 118481 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CGYLPGNEK [K].cGYLPGNEk.[L] N-Term(TMT6plex); C1(Carbamidomethyl); K9(TMT6plex) 3 Q5SVP3 PA28 beta subunit OS=Mus musculus OX=10090 GN=PSME2b PE=1 SV=1 E0CZ90; Q5SVP3; G3X9V0 Proteasome activator complex subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Psme2 PE=1 SV=1; PA28 beta subunit OS=Mus musculus OX=10090 GN=PSME2b PE=1 SV=1; Proteasome activator complex subunit 2 OS=Mus musculus OX=10090 GN=Psme2 PE=1 SV=1 0 2 2 0.5949 0 1 1 1 748.40265 1495.79802 1495.79792 0.07 0.00005 0/0 0 0 3956530.75 HCD 30 MS2 0 322.4 110 76.4281 23554 23554 23545 QEplus033719.raw F4 346.1 299.7 343.5 249.5 385.9 309.9 306 3.11 1 FALSE 1.14E-05 1.94E-06 1.183 -250 118488 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VCALGESK [K].vcALGESk.[A] N-Term(TMT6plex); C2(Carbamidomethyl); K8(TMT6plex) 7 O88342 WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3 Q3TNK2; O88342; Q9DC08; Q3TE06; Q3U136; Q9DBM8; Q80ZI9 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat domain 1 (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1 0 2 2 0.462 0 1 1 1 661.38 1321.75273 1321.75499 -1.71 -0.00113 0/0 0 0 90043992 HCD 30 MS2 24.53616 1253.7 20.358 76.4304 23555 23555 23545 QEplus033719.raw F4 1306.7 1071.7 1251 890.8 1841.1 1160.9 412 3.16 1 FALSE 1.14E-05 0.0005332 0.717 -250 118495 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VYEGERPLTK [K].vYEGERPLTk.[D] N-Term(TMT6plex); K10(TMT6plex) 10 P20029 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q3U9G2; Q3U6V3; Q3TUS2; Q3UEM8; Q3U7T8; Q3TI47 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1 0 3 3 0.5305 0 1 1 1 550.659 1649.96244 1649.96268 -0.15 -0.00008 0/0 0 0 67169272 HCD 30 MS2 15.62955 826.6 21.147 76.4377 23557 23557 23556 QEplus033719.raw F4 785 717.4 943.7 746.9 912.5 853.8 447 2.79 1 FALSE 1.14E-05 5.98E-05 0.9 -250 118503 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QVPSQIAVTR [K].qVPSQIAVTR.[L] N-Term(TMT6plex) 1 Q6PB66 "Leucine-rich PPR motif-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Lrpprc PE=1 SV=2" Q6PB66 "Leucine-rich PPR motif-containing protein, mitochondrial OS=Mus musculus OX=10090 GN=Lrpprc PE=1 SV=2" 0 2 2 0.6809 0 1 1 1 664.39746 1327.78765 1327.78952 -1.41 -0.00093 0/0 0 0 19547840 HCD 30 MS2 20.34364 692.9 66.081 76.44 23558 23558 23556 QEplus033719.raw F4 699.7 450.4 758.2 743.6 596.9 908.3 272 2.57 1 FALSE 1.14E-05 1.84E-07 1.377 -250 118509 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVSLGAGAK [R].tVSLGAGAk.[D] N-Term(TMT6plex); K9(TMT6plex) 9 Q5SQB7 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1 Q5SQB7; Q5SQB0; Q8BSZ3; Q5BL09; Q5U438; Q9DAY9; Q3UDA7; Q5SQB5; Q3U536 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Npm1 protein OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1 0 2 2 0.3297 0 1 1 1 631.39819 1261.78911 1261.78801 0.87 0.00055 0/0 0 0 98099456 HCD 30 MS2 17.84842 1173.8 20.692 76.4423 23559 23559 23556 QEplus033719.raw F4 1232.9 1034 1308.8 790.4 1476.2 1200.6 299 3.64 1 FALSE 0.0002518 0.005213 0.496 -250 118519 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IASNAGSIA [R].iASNAGSIA.[-] N-Term(TMT6plex) 1 P62830 60S ribosomal protein L23 OS=Mus musculus OX=10090 GN=Rpl23 PE=1 SV=1 P62830 60S ribosomal protein L23 OS=Mus musculus OX=10090 GN=Rpl23 PE=1 SV=1 0 2 2 0.5118 0 1 1 1 516.79834 1032.5894 1032.58869 0.69 0.00036 0/0 0 0 42391884 HCD 30 MS2 16.98663 492.3 30.636 76.4445 23560 23560 23556 QEplus033719.raw F4 500 432.3 533.8 438 506.7 543.2 222 2.54 1 FALSE 0.001736 0.02915 0.221 -250 118529 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAQYESK [R].lAQYESk.[K] N-Term(TMT6plex); K7(TMT6plex) 2 O70251 Elongation factor 1-beta OS=Mus musculus OX=10090 GN=Eef1b PE=1 SV=5 A0A087WS46; O70251 Eukaryotic translation elongation factor 1 beta 2 OS=Mus musculus OX=10090 GN=Eef1b2 PE=1 SV=1; Elongation factor 1-beta OS=Mus musculus OX=10090 GN=Eef1b PE=1 SV=5 0 3 3 0.2605 0 1 1 1 432.92377 1296.75675 1296.75637 0.29 0.00012 0/0 0 0 35383324 HCD 30 MS2 6.440804 518.6 33.1 76.4468 23561 23561 23556 QEplus033719.raw F4 495.3 374.2 544.9 431.9 569.9 695.1 319 2.61 1 FALSE 0.001266 0.01724 0.307 -250 118544 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QASQGMVGQLAAR [R].qASQGMVGQLAAR.[R] N-Term(TMT6plex) 4 Q3UXP2 RuvB-like helicase OS=Mus musculus OX=10090 GN=Ruvbl2 PE=2 SV=1 Q3UXP2; A0A1B0GT54; A0A1B0GSR4; Q9WTM5 RuvB-like helicase OS=Mus musculus OX=10090 GN=Ruvbl2 PE=2 SV=1; RuvB-like helicase (Fragment) OS=Mus musculus OX=10090 GN=Ruvbl2 PE=1 SV=1; RuvB-like helicase (Fragment) OS=Mus musculus OX=10090 GN=Ruvbl2 PE=1 SV=1; RuvB-like 2 OS=Mus musculus OX=10090 GN=Ruvbl2 PE=1 SV=3 0 2 2 0.5655 0 1 1 1 773.42426 1545.84123 1545.83688 2.82 0.00218 0/0 0 0 6381835.5 HCD 30 MS2 17.26477 386.9 110 76.4518 23563 23563 23556 QEplus033719.raw F4 403.1 351.8 433.2 328 386.9 418.6 365 4.58 1 FALSE 1.14E-05 1.66E-12 2.335 -250 118552 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALYTDPK [K].aLYTDPk.[S] N-Term(TMT6plex); K7(TMT6plex) 3 Q99J29 Carboxypeptidase OS=Mus musculus OX=10090 GN=Scpep1 PE=2 SV=1 Q99J29; Q920A5; Q3U5P4 Carboxypeptidase OS=Mus musculus OX=10090 GN=Scpep1 PE=2 SV=1; Retinoid-inducible serine carboxypeptidase OS=Mus musculus OX=10090 GN=Scpep1 PE=1 SV=2; Carboxypeptidase OS=Mus musculus OX=10090 GN=Scpep1 PE=2 SV=1 0 2 2 0.4066 0 1 1 1 633.37842 1265.74956 1265.75056 -0.79 -0.0005 0/0 0 0 42968688 HCD 30 MS2 34.18357 1280.4 33.287 76.4541 23564 23564 23556 QEplus033719.raw F4 1226.2 1283.7 1428.1 962.6 1573.9 1207.7 432 2.41 1 FALSE 0.0008718 0.01199 0.373 -250 118561 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGMTIAK [K].dGMTIAk.[E] N-Term(TMT6plex); K7(TMT6plex) 7 P47738 "Aldehyde dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1" P47738; Q3TVM2; A0A0G2JF60; A0A0G2JEU1; Q3UJW1; Q3U9J7; Q3U6I3 "Aldehyde dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1; Aldehyde dehydrogenase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1; Aldehyde dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Aldh2 PE=1 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1; Aldedh domain-containing protein OS=Mus musculus OX=10090 GN=Aldh2 PE=2 SV=1" 0 2 2 0.4139 0 1 1 1 597.35193 1193.69658 1193.69642 0.14 0.00008 0/0 0 0 37165892 HCD 30 MS2 19.44941 1172 25.222 76.4564 23565 23565 23556 QEplus033719.raw F4 1186.9 1120.6 1358.8 947.6 1237 1180.9 402 2.73 1 FALSE 0.0002909 0.005845 0.482 -250 118569 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQKPWAK [K].aQkPWAk.[K] N-Term(TMT6plex); K3(TMT6plex); K7(TMT6plex) 4 Q9WVE8 Protein kinase C and casein kinase substrate in neurons protein 2 OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1 Q61644; Q3UP40; Q9WVE8; Q3TYF2 Protein kinase C and casein kinase substrate in neurons protein 1 OS=Mus musculus OX=10090 GN=Pacsin1 PE=1 SV=1; Protein kinase C and casein kinase substrate in neurons protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1; Protein kinase C and casein kinase substrate in neurons protein 2 OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1; Protein kinase C and casein kinase substrate in neurons protein 1 OS=Mus musculus OX=10090 GN=Pacsin1 PE=2 SV=1 0 3 3 0.3169 0 1 1 1 505.99323 1515.96512 1515.96144 2.43 0.00123 0/0 0 0 10761173 HCD 30 MS2 43.35747 1588.1 110 76.4589 23566 23566 23556 QEplus033719.raw F4 1430.7 1503.1 1852.1 1430.1 1504.9 1807.5 247 1.42 1 FALSE 0.005397 0.09211 0.028 -250 118577 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGASDALLYR [K].gGASDALLYR.[A] N-Term(TMT6plex) 1 P48771 "Cytochrome c oxidase subunit 7A2, mitochondrial OS=Mus musculus OX=10090 GN=Cox7a2 PE=1 SV=2" P48771 "Cytochrome c oxidase subunit 7A2, mitochondrial OS=Mus musculus OX=10090 GN=Cox7a2 PE=1 SV=2" 0 2 2 0.5512 0 1 1 1 626.34814 1251.68901 1251.68947 -0.36 -0.00023 0/0 0 0 11148751 HCD 30 MS2 33.56002 1180.6 110 76.4662 23568 23568 23567 QEplus033719.raw F4 1135.1 967 1243.7 1084.8 1422.4 1230.8 302 3.03 1 FALSE 1.14E-05 6.23E-08 1.466 -250 118601 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVSLGAGAK [R].tVSLGAGAk.[D] N-Term(TMT6plex); K9(TMT6plex) 9 Q5SQB7 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1 Q5SQB7; Q5SQB0; Q8BSZ3; Q5BL09; Q5U438; Q9DAY9; Q3UDA7; Q5SQB5; Q3U536 Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Npm1 protein OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleoplasmin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=1 SV=1; Nucleophosmin OS=Mus musculus OX=10090 GN=Npm1 PE=2 SV=1 0 3 3 0.4006 0 1 1 1 421.26697 1261.78635 1261.78801 -1.31 -0.00055 0/0 0 0 23754080 HCD 30 MS2 27.77738 592.1 51.784 76.4732 23571 23571 23567 QEplus033719.raw F4 684.1 481.7 648 421.6 736.5 580.5 351 3.62 1 FALSE 1.14E-05 8.35E-05 0.872 -250 118617 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLHPAVHAGILAR [K].tLHPAVHAGILAR.[N] N-Term(TMT6plex) 2 Q9CWJ9 Bifunctional purine biosynthesis protein ATIC OS=Mus musculus OX=10090 GN=Atic PE=1 SV=2 Q9CWJ9; B0LAC5 Bifunctional purine biosynthesis protein ATIC OS=Mus musculus OX=10090 GN=Atic PE=1 SV=2; AICAR transformylase/inosine monophosphate cyclohydrolase (Fragment) OS=Mus musculus OX=10090 GN=Atic PE=2 SV=1 0 4 4 0.7182 0 1 1 1 396.99368 1584.9529 1584.95356 -0.42 -0.00016 0/0 0 0 6616948.5 HCD 30 MS2 17.28592 307.3 110 76.4779 23573 23573 23567 QEplus033719.raw F4 330.9 179.1 337.9 320 225.7 450.5 286 6.14 1 FALSE 1.14E-05 1.35E-10 1.972 -250 118624 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAQIAMMQQR [K].dAQIAMMQQR.[I] N-Term(TMT6plex) 4 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 Q3TH77; E9Q7G0; A0A1B0GT61; A0A1B0GSW3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Numa1 PE=2 SV=1; Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1; Nuclear mitotic apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1; Nuclear mitotic apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 0 2 2 0.6451 0 1 1 1 710.86633 1420.72539 1420.72382 1.1 0.00078 0/0 0 0 6085687 HCD 30 MS2 13.85153 392.4 110 76.4804 23574 23574 23567 QEplus033719.raw F4 379.1 326.3 413.5 391.9 385.1 458.3 194 3.55 1 FALSE 1.14E-05 2.58E-07 1.349 -250 118656 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAMEDGEIDGNK [K].eAMEDGEIDGNk.[V] N-Term(TMT6plex); K12(TMT6plex) 6 Q8CD23 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 Q8CD23; Q3TL52; P09405; Q3TGR3; Q3TT41; Q8CE30 Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=1 SV=2; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1; Nucleolin OS=Mus musculus OX=10090 GN=Ncl PE=2 SV=1 0 2 2 0.7323 0 1 1 1 883.43799 1765.8687 1765.86785 0.48 0.00042 0/0 0 0 4729207.5 HCD 30 MS2 29.78438 345 110 76.4978 23580 23580 23578 QEplus033719.raw F4 325.7 312 364 241 463.6 363.6 160 4.52 1 FALSE 1.14E-05 2.56E-12 2.299 -250 118664 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDNQSPIELHTK [K].gDNQSPIELHTk.[D] N-Term(TMT6plex); K12(TMT6plex) 1 P16015 Carbonic anhydrase 3 OS=Mus musculus OX=10090 GN=Ca3 PE=1 SV=3 P16015 Carbonic anhydrase 3 OS=Mus musculus OX=10090 GN=Ca3 PE=1 SV=3 0 3 3 0.5423 0 1 1 1 599.66882 1796.99192 1796.99068 0.69 0.00041 0/0 0 0 97044832 HCD 30 MS2 5.079122 571.5 18.519 76.5001 23581 23581 23578 QEplus033719.raw F4 641.2 465.7 490.8 398.8 1067.3 364.9 413 5.68 1 FALSE 1.14E-05 2.02E-15 2.889 -250 118670 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYIPPK [K].tYIPPk.[G] N-Term(TMT6plex); K6(TMT6plex) 12 Q8BNM0 High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 Q8BQ02; Q8BNM0; Q6P202; Q58EV5; Q3UJK0; Q8C7C4; D3YZ18; D3YVC6; Q3UBK2; A0A0J9YUZ4; A0A0J9YUD8; Q497Z6 High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=8; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein B1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 0 2 2 0.369 0 1 1 1 588.87238 1176.73747 1176.73927 -1.52 -0.0009 0/0 0 0 21288764 HCD 30 MS2 46.80063 1349.9 41.862 76.5024 23582 23582 23578 QEplus033719.raw F4 1355.3 1160.2 1349.6 1061.5 1826.3 1346.4 239 1.68 1 FALSE 0.008298 0.1424 -0.078 -250 118680 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTYTDCAIKK [K].gTYTDcAIkk.[G] N-Term(TMT6plex); C6(Carbamidomethyl); K9(TMT6plex); K10(TMT6plex) 2 Q04857 Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 Q8C6Y0; Q04857 VWFA domain-containing protein OS=Mus musculus OX=10090 GN=Col6a1 PE=2 SV=1; Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 1 3 3 0.6288 0 1 1 1 615.35754 1844.05808 1844.05548 1.41 0.00087 0/0 0 0 17474712 HCD 30 MS2 27.58911 1436.6 102.302 76.5048 23583 23583 23578 QEplus033719.raw F4 1399.1 1515.8 1592.7 1114.7 1771.3 1226.1 431 2.99 1 FALSE 1.14E-05 1.33E-07 1.404 -250 118688 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WQDIQNDPR [R].wQDIQNDPR.[Y] N-Term(TMT6plex) 10 Q5DTP7 DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Chd4 PE=2 SV=1 E9PYU4; Q5DTP7; E9QAS5; Q6PDQ2; Q3UFM8; A2A8L1; Q4QQN1; E9PYL1; Q99JM0; E9QAS4 DNA helicase OS=Mus musculus OX=10090 GN=Chd5 PE=1 SV=1; DNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Chd4 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1; Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1; CHDCT2 domain-containing protein OS=Mus musculus OX=10090 GN=Chd4 PE=2 SV=1; Chromodomain-helicase-DNA-binding protein 5 OS=Mus musculus OX=10090 GN=Chd5 PE=1 SV=1; Chd5 protein OS=Mus musculus OX=10090 GN=Chd5 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Chd5 PE=1 SV=1; Chd4 protein (Fragment) OS=Mus musculus OX=10090 GN=Chd4 PE=2 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1 0 2 2 0.586 0 1 1 1 700.85974 1400.71221 1400.71199 0.15 0.00011 0/0 0 0 6076840.5 HCD 30 MS2 25.75275 484.1 110 76.5098 23585 23585 23578 QEplus033719.raw F4 434.6 475.6 530.5 374.7 601.7 487.4 155 2.85 1 FALSE 0.0002419 0.00487 0.504 -250 118692 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FVSSPTK [K].fVSSPTk.[E] N-Term(TMT6plex); K7(TMT6plex) 3 B9EKB8 Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1 B9EKB8; B7ZWC4; Q07113 Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Cation-independent mannose-6-phosphate receptor OS=Mus musculus OX=10090 GN=Igf2r PE=1 SV=1 0 2 2 0.4762 0 1 1 1 612.37329 1223.73931 1223.73999 -0.56 -0.00034 0/0 0 0 4970267.5 HCD 30 MS2 0 952.9 110 76.5123 23586 23586 23578 QEplus033719.raw F4 1028 780.5 1018.8 846.2 953.8 1089.8 302 2.31 1 FALSE 0.001894 0.03206 0.207 -250 118702 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCLDSFASR [R].scLDSFASR.[Q] N-Term(TMT6plex); C2(Carbamidomethyl) 2 Q3TIR3 Synembryn-A OS=Mus musculus OX=10090 GN=Ric8a PE=1 SV=2 Q3TIR3; A0A1B0GS30 Synembryn-A OS=Mus musculus OX=10090 GN=Ric8a PE=1 SV=2; Synembryn-A OS=Mus musculus OX=10090 GN=Ric8a PE=1 SV=1 0 2 2 0.6691 0 1 1 1 636.31641 1271.62554 1271.62515 0.3 0.00019 0/0 0 0 3086272.75 HCD 30 MS2 63.20184 722.7 110 76.5148 23587 23587 23578 QEplus033719.raw F4 725.6 556.2 822.4 740.7 641.4 849.6 97 2.72 1 FALSE 0.0006216 0.009255 0.417 -250 118723 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VCALGESK [K].vcALGESk.[A] N-Term(TMT6plex); C2(Carbamidomethyl); K8(TMT6plex) 7 O88342 WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3 Q3TNK2; O88342; Q9DC08; Q3TE06; Q3U136; Q9DBM8; Q80ZI9 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat-containing protein 1 OS=Mus musculus OX=10090 GN=Wdr1 PE=1 SV=3; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1; WD repeat domain 1 (Fragment) OS=Mus musculus OX=10090 GN=Wdr1 PE=2 SV=1 0 3 3 0.4177 0 1 1 1 441.25711 1321.75678 1321.75499 1.35 0.0006 0/0 0 0 13833110 HCD 30 MS2 27.77132 647.5 93.821 76.5267 23591 23591 23589 QEplus033719.raw F4 627.1 512.7 671.2 469.8 928.5 675.5 419 3.16 1 FALSE 5.44E-05 0.001933 0.602 -250 118733 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDDVVNTR [K].iDDVVNTR.[-] N-Term(TMT6plex) 4 P80315 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3 P80315; Q3TII0; Q3UJZ8; G5E839 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1 0 2 2 0.5621 0 1 1 1 580.82751 1160.64775 1160.64727 0.42 0.00024 0/0 0 0 20102716 HCD 30 MS2 20.34712 1097.5 110 76.5292 23592 23592 23589 QEplus033719.raw F4 1181.9 903 1138.4 991.2 1171.7 1198.8 365 2.9 1 FALSE 6.52E-05 0.002679 0.57 -250 118741 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTEPMVR [R].lTEPMVR.[N] N-Term(TMT6plex) 3 Q91VD9 "NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs1 PE=1 SV=2" Q3TIU7; Q91VD9; Q3UIQ2 "NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs1 PE=2 SV=1; NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs1 PE=1 SV=2; NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Mus musculus OX=10090 GN=Ndufs1 PE=2 SV=1" 0 2 2 0.4335 0 1 1 1 537.81415 1074.62102 1074.61788 2.92 0.00157 0/0 0 0 14031320 HCD 30 MS2 0 1202.8 105.459 76.5316 23593 23593 23589 QEplus033719.raw F4 1234.7 972.8 1351.9 1129.5 1167.1 1360.8 325 2.33 1 FALSE 0.001607 0.02537 0.242 -250 118750 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FGSRPEAVIQSR [R].fGSRPEAVIQSR.[Y] N-Term(TMT6plex) 2 Q9ERG0 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3 Q9ERG0; Q8C7S2 LIM domain and actin-binding protein 1 OS=Mus musculus OX=10090 GN=Lima1 PE=1 SV=3; LIM zinc-binding domain-containing protein OS=Mus musculus OX=10090 GN=Lima1 PE=2 SV=1 0 3 3 0.4669 0 1 1 1 525.96588 1575.88309 1575.88046 1.67 0.00088 0/0 0 0 13648668 HCD 30 MS2 48.49744 1133.5 110 76.5341 23594 23594 23589 QEplus033719.raw F4 1107.8 865.5 1232.5 1142.8 1073.9 1378.7 448 3.32 1 FALSE 1.14E-05 1.04E-05 1.044 -250 118755 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GCADNMTLTVSR [K].gcADNMTLTVSR.[S] N-Term(TMT6plex); C2(Carbamidomethyl) 3 O70400 PDZ and LIM domain protein 1 OS=Mus musculus OX=10090 GN=Pdlim1 PE=1 SV=4 S4R1V0; Q3TZ17; O70400 PDZ and LIM domain protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Pdlim1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pdlim1 PE=2 SV=1; PDZ and LIM domain protein 1 OS=Mus musculus OX=10090 GN=Pdlim1 PE=1 SV=4 0 2 2 0.771 0 1 1 1 777.38434 1553.7614 1553.76133 0.05 0.00004 0/0 0 0 10451062 HCD 30 MS2 0 455.2 110 76.5366 23595 23595 23589 QEplus033719.raw F4 483 441.3 493.8 355.4 486.5 471 160 4.41 1 FALSE 1.14E-05 1.97E-10 1.941 -250 118782 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FERPDGSHFDVR [R].fERPDGSHFDVR.[I] N-Term(TMT6plex) 1 Q91VA6 Polymerase delta-interacting protein 2 OS=Mus musculus OX=10090 GN=Poldip2 PE=1 SV=1 Q91VA6 Polymerase delta-interacting protein 2 OS=Mus musculus OX=10090 GN=Poldip2 PE=1 SV=1 0 4 4 0.5901 0 1 1 1 423.46735 1690.84755 1690.84988 -1.38 -0.00058 0/0 0 0 3154533.25 HCD 30 MS2 41.73961 367 110 76.5464 23599 23599 23589 QEplus033719.raw F4 357.5 303.1 414 288.4 420.5 418.4 191 4.44 1 FALSE 1.14E-05 6.55E-06 1.082 -250 118790 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLQLAIR [R].hLQLAIR.[NG] N-Term(TMT6plex) 17 Q149V4; Q8BFU2; Q3THW5; P27661 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1;Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3;Histone H2A.V OS=Mus musculus OX=10090 GN=H2az2 PE=1 SV=3;Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 Q149V4; Q8BFU2; Q3THW5; C0HKE5; P0C0S6; Q8CGP5; A0AUV1; Q8CGP4; Q3TFU6; Q8R1M2; Q8R029; P27661; A0A0N4SV66; Q64426; Q8CGP7; Q8CGP6; Q6GSS7 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1; Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3; Histone H2A.V OS=Mus musculus OX=10090 GN=H2az2 PE=1 SV=3; Histone H2A type 1-G OS=Mus musculus OX=10090 GN=H2ac11 PE=1 SV=1; Histone H2A.Z OS=Mus musculus OX=10090 GN=H2az1 PE=1 SV=2; Histone H2A type 1-F OS=Mus musculus OX=10090 GN=Hist1h2af PE=1 SV=3; Histone H2A (Fragment) OS=Mus musculus OX=10090 GN=H2ac12 PE=2 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2ac1 PE=1 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2az1 PE=2 SV=1; Histone H2A.J OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2az2 PE=2 SV=1; Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2; Histone H2A OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A (Fragment) OS=Mus musculus domesticus OX=10092 GN=H2A PE=2 SV=1; Histone H2A type 1-K OS=Mus musculus OX=10090 GN=H2ac15 PE=1 SV=3; Histone H2A type 1-H OS=Mus musculus OX=10090 GN=H2ac12 PE=1 SV=3; Histone H2A type 2-A OS=Mus musculus OX=10090 GN=Hist2h2aa1 PE=1 SV=3 0 3 3 0.1835 0 1 1 1 360.56787 1079.68906 1079.68868 0.35 0.00013 0/0 0 0 217410016 HCD 30 MS2 3.28662 127.1 5.049 76.5537 23601 23601 23600 QEplus033719.raw F4 120.9 127.4 153.3 71.7 167.8 121.3 16 3.16 4 FALSE 0.0004392 0.007518 0.448 -250 118811 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQIALK [K].sQIALk.[EL] N-Term(TMT6plex); K6(TMT6plex) 2 P14152 "Malate dehydrogenase, cytoplasmic OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=3" P14152; A0A5F8MPN8 "Malate dehydrogenase, cytoplasmic OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=3; Malate dehydrogenase OS=Mus musculus OX=10090 GN=Mdh1 PE=1 SV=1" 0 2 2 0.1044 0 1 1 1 559.37317 1117.73906 1117.73452 4.07 0.00227 0/0 0 0 21754686 HCD 30 MS2 43.52714 915.4 43.298 76.5605 23604 23604 23600 QEplus033719.raw F4 959.3 741.7 877.7 829.7 1041.1 1043 179 1.82 1 FALSE 0.005822 0.09719 0.014 -250 118812 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQLALK [K].sQLALk.[EL] N-Term(TMT6plex); K6(TMT6plex) 5 Q99KF2; Q6A078-2; Q6A078; E9Q9M0; A0A1W2P6U7 Cep290 protein (Fragment) OS=Mus musculus OX=10090 GN=Cep290 PE=2 SV=2; Isoform 2 of Centrosomal protein of 290 kDa OS=Mus musculus OX=10090 GN=Cep290; Centrosomal protein of 290 kDa OS=Mus musculus OX=10090 GN=Cep290 PE=1 SV=2; Centrosomal protein of 290 kDa OS=Mus musculus OX=10090 GN=Cep290 PE=1 SV=1; Centrosomal protein of 290 kDa (Fragment) OS=Mus musculus OX=10090 GN=Cep290 PE=4 SV=1 0 2 2 0.1044 0 1 2 2 559.37317 1117.73906 1117.73452 4.07 0.00227 0/0 0 0 21754686 HCD 30 MS2 43.52714 915.4 43.298 76.5605 23604 23604 23600 QEplus033719.raw F4 959.3 741.7 877.7 829.7 1041.1 1043 179 1.82 1 FALSE 0.005822 0.09719 0.014 -250 118821 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CALGWDHQEK [K].cALGWDHQEk.[L] N-Term(TMT6plex); C1(Carbamidomethyl); K10(TMT6plex) 3 Q60598 Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2 Q8BNA5; Q60598; Q921L6 SH3 domain-containing protein OS=Mus musculus OX=10090 GN=Cttn PE=2 SV=1; Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2; Cttn protein OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=1 0 3 3 0.7047 0 1 1 1 567.96417 1701.87796 1701.8783 -0.2 -0.00011 0/0 0 0 15220380 HCD 30 MS2 31.01097 1056.5 104.924 76.5629 23605 23605 23600 QEplus033719.raw F4 1068.8 991.3 1162.7 770.9 1235.6 1109.7 232 4.47 1 FALSE 1.14E-05 8.31E-09 1.632 -250 118829 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTDYAEEK [R].vTDYAEEk.[E] N-Term(TMT6plex); K8(TMT6plex) 2 Q9CR41 Huntingtin-interacting protein K OS=Mus musculus OX=10090 GN=Hypk PE=1 SV=2 Q9CR41-2; Q9CR41 Isoform 2 of Huntingtin-interacting protein K OS=Mus musculus OX=10090 GN=Hypk; Huntingtin-interacting protein K OS=Mus musculus OX=10090 GN=Hypk PE=1 SV=2 0 2 2 0.4448 0 1 1 1 706.88977 1412.77226 1412.76733 3.49 0.00247 0/0 0 0 7249867.5 HCD 30 MS2 30.73349 740.1 110 76.5654 23606 23606 23600 QEplus033719.raw F4 763.7 513.3 789.5 730.8 724.9 918.2 289 2.99 1 FALSE 1.14E-05 0.0001919 0.803 -250 118835 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETTPFYPR [K].eTTPFYPR.[S] N-Term(TMT6plex) 1 Q8K0C9 "GDP-mannose 4,6 dehydratase OS=Mus musculus OX=10090 GN=Gmds PE=1 SV=1" Q8K0C9 "GDP-mannose 4,6 dehydratase OS=Mus musculus OX=10090 GN=Gmds PE=1 SV=1" 0 2 2 0.572 0 1 1 1 620.33252 1239.65776 1239.6571 0.53 0.00033 0/0 0 0 2656510.75 HCD 30 MS2 0 685.6 110 76.5679 23607 23607 23600 QEplus033719.raw F4 629 620 805.6 549.8 707 802.5 243 2.43 1 FALSE 0.002552 0.05037 0.141 -250 118853 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESLDEVSK [K].eSLDEVSk.[S] N-Term(TMT6plex); K8(TMT6plex) 2 O35857 Mitochondrial import inner membrane translocase subunit TIM44 OS=Mus musculus OX=10090 GN=Timm44 PE=1 SV=2 O35857; Q8R3X4 Mitochondrial import inner membrane translocase subunit TIM44 OS=Mus musculus OX=10090 GN=Timm44 PE=1 SV=2; Timm44 protein (Fragment) OS=Mus musculus OX=10090 GN=Timm44 PE=2 SV=1 0 2 2 0.2594 0 1 1 1 682.88715 1364.76702 1364.76733 -0.23 -0.00016 0/0 0 0 7618025 HCD 30 MS2 12.64828 685.7 110 76.5752 23610 23610 23600 QEplus033719.raw F4 701.5 536.4 762.4 769.7 580 764.3 384 2.66 1 FALSE 1.14E-05 0.0002741 0.773 -250 118857 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLPFQR [R].kLPFQR.[L] N-Term(TMT6plex); K1(TMT6plex) 9 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; E0CZ27; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 1 3 3 0.1186 0 1 1 1 416.27332 1246.80539 1246.8036 1.44 0.0006 0/0 0 0 1772985984 HCD 30 MS2 4.84112 657.5 0.676 76.5825 23612 23612 23611 QEplus033719.raw F4 543 752.2 756.2 385.3 999.4 508.9 215 2.36 2 FALSE 0.007504 0.1227 -0.047 -250 118884 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIINADK [K].tIINADk.[D] N-Term(TMT6plex); K7(TMT6plex) 2 Q63810 Calcineurin subunit B type 1 OS=Mus musculus OX=10090 GN=Ppp3r1 PE=1 SV=3 Q63810-2; Q63810 Isoform 2 of Calcineurin subunit B type 1 OS=Mus musculus OX=10090 GN=Ppp3r1; Calcineurin subunit B type 1 OS=Mus musculus OX=10090 GN=Ppp3r1 PE=1 SV=3 0 2 2 0.3357 0 1 1 1 616.88464 1232.76201 1232.76146 0.45 0.00028 0/0 0 0 10697037 HCD 30 MS2 12.40043 1154.6 69.937 76.5918 23616 23616 23611 QEplus033719.raw F4 1205.8 854.1 1199.1 1051.4 1317.9 1299.4 502 2.77 1 FALSE 0.0002019 0.004078 0.525 -250 118911 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSSSFAAAMAR [R].tSSSFAAAMAR.[L] N-Term(TMT6plex) 3 E9QAI5 Aspartate carbamoyltransferase OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1 E9QAI5; Q80VF8; B2RQC6 Aspartate carbamoyltransferase OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1; CAD protein (Fragment) OS=Mus musculus OX=10090 GN=Cad PE=2 SV=2; CAD protein OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1 0 2 2 0.6184 0 1 1 1 664.84552 1328.68376 1328.683 0.57 0.00038 0/0 0 0 6841188.5 HCD 30 MS2 57.55703 879 110 76.5991 23619 23619 23611 QEplus033719.raw F4 921.9 687.6 924.2 835.8 899.9 1004.6 166 2.28 1 FALSE 1.14E-05 1.12E-06 1.228 -250 118921 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLCSDDTPMVR [R].nLcSDDTPMVR.[R] N-Term(TMT6plex); C3(Carbamidomethyl) 2 Q76MZ3 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=3 Q8C2E1; Q76MZ3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppp2r1a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=3 0 2 2 0.7708 0 1 1 1 768.87097 1536.73467 1536.73478 -0.07 -0.00006 0/0 0 0 6467260 HCD 30 MS2 19.71753 484.7 110 76.6016 23620 23620 23611 QEplus033719.raw F4 491.5 401.4 515.2 474.9 458 567.3 61 3.84 1 FALSE 1.14E-05 2.69E-08 1.536 -250 118925 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVFEYQTR [K].tVFEYQTR.[K] N-Term(TMT6plex) 10 Q3TW25; Q7TT32 "Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1;Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1" Q8BJU6; Q8BKY2; Q3TW25; Q7TT32; Q5DTG2; Q3UH72; Q8BLW4; Q8BMR6; Q8K173; Q3TVI5 "Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Collagen, type III, alpha 1 OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; MKIAA4231 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Col3a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col3a1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Col3a1 PE=1 SV=1" 0 2 2 0.3946 0 1 1 1 636.84271 1272.67815 1272.67857 -0.33 -0.00021 0/0 0 0 6459816.5 HCD 30 MS2 22.75288 830.6 110 76.6041 23621 23621 23611 QEplus033719.raw F4 783.5 760.7 953.7 822.6 756.1 907.3 225 2.94 2 FALSE 3.35E-05 0.001139 0.651 -250 118941 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDNQSPIELHTK [K].gDNQSPIELHTk.[D] N-Term(TMT6plex); K12(TMT6plex) 1 P16015 Carbonic anhydrase 3 OS=Mus musculus OX=10090 GN=Ca3 PE=1 SV=3 P16015 Carbonic anhydrase 3 OS=Mus musculus OX=10090 GN=Ca3 PE=1 SV=3 0 4 4 0.6435 0 1 1 1 450.00327 1796.99123 1796.99068 0.31 0.00014 0/0 0 0 21864440 HCD 30 MS2 13.57964 495.6 78.876 76.6137 23624 23624 23622 QEplus033719.raw F4 520.6 397.8 464.4 335.1 868.2 387.8 390 4.46 1 FALSE 1.14E-05 3.52E-06 1.134 -250 118947 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSTVAQLVK [K].rSTVAQLVk.[R] N-Term(TMT6plex); K9(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 1 3 3 0.2544 0 1 1 1 487.31708 1459.93668 1459.93607 0.42 0.0002 0/0 0 0 101252504 HCD 30 MS2 46.12214 874.3 12.597 76.616 23625 23625 23622 QEplus033719.raw F4 741.7 698.8 1039.5 778.7 821.6 1165.5 266 3.97 1 FALSE 1.14E-05 2.50E-07 1.352 -250 118967 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGFSDADVK [K].gGFSDADVk.[M] N-Term(TMT6plex); K9(TMT6plex) 4 Q569Z6 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1 Q569Z6; Q8BZN7; Q8BV76; F6YSQ2 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Thrap3 PE=2 SV=1; Thyroid hormone receptor-associated protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=8 0 2 2 0.4211 0 1 1 1 677.37433 1353.74138 1353.74145 -0.05 -0.00004 0/0 0 0 13648956 HCD 30 MS2 0 1165.7 110 76.623 23628 23628 23622 QEplus033719.raw F4 1205 1221 1256.1 854.3 1342.7 1115.4 295 2.85 1 FALSE 1.14E-05 5.12E-06 1.103 -250 118973 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADTLTLEER [K].aDTLTLEER.[V] N-Term(TMT6plex) 6 Q80UG5 Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1 A2A6U5; Q80UG5-3; Q80UG5; A2A6U3; Q80UG5-2; Q3TDR9 Septin-9 (Fragment) OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Isoform 3 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Septin-9 OS=Mus musculus OX=10090 GN=Septin9 PE=1 SV=1; Isoform 2 of Septin-9 OS=Mus musculus OX=10090 GN=Septin9; Septin-type G domain-containing protein OS=Mus musculus OX=10090 GN=Septin9 PE=2 SV=1 0 2 2 0.5219 0 1 1 1 638.85181 1276.69634 1276.69461 1.35 0.00086 0/0 0 0 5293282.5 HCD 30 MS2 15.16337 694.8 110 76.6255 23629 23629 23622 QEplus033719.raw F4 681.9 621.7 800.6 514.4 779.1 771 317 3.2 1 FALSE 1.14E-05 0.0002567 0.779 -250 119004 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QPVIVK [K].qPVIVk.[A] N-Term(TMT6plex); K6(TMT6plex) 1 P14115 60S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5 P14115 60S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5 0 2 2 0.2044 0 1 1 1 571.38934 1141.77141 1141.7709 0.45 0.00025 0/0 0 0 40000628 HCD 30 MS2 13.79397 1080.5 52.421 76.6398 23634 23634 23633 QEplus033719.raw F4 1034.4 904.8 1189.5 897.3 1250.8 1206 96 1.81 1 FALSE 0.007275 0.1164 -0.034 -250 119022 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDNQSPIELHTK [K].gDNQSPIELHTk.[D] N-Term(TMT6plex); K12(TMT6plex) 1 P16015 Carbonic anhydrase 3 OS=Mus musculus OX=10090 GN=Ca3 PE=1 SV=3 P16015 Carbonic anhydrase 3 OS=Mus musculus OX=10090 GN=Ca3 PE=1 SV=3 0 2 2 0.4697 0 1 1 1 898.99982 1796.99236 1796.99068 0.93 0.00084 0/0 0 0 10927884 HCD 30 MS2 0 390.8 110 76.6449 23636 23636 23633 QEplus033719.raw F4 439.7 335.4 317 252.4 790.4 209.9 411 4.62 1 FALSE 1.14E-05 1.09E-08 1.61 -250 119027 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVNGMTVK [K].eVNGMTVk.[I] N-Term(TMT6plex); K8(TMT6plex) 2 Q8K009 Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=2 D3Z6B9; Q8K009 Formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=1; Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=2 0 2 2 0.4661 0 1 1 1 668.38745 1335.76763 1335.77064 -2.26 -0.00151 0/0 0 0 9106321 HCD 30 MS2 22.53111 997.7 110 76.6474 23637 23637 23633 QEplus033719.raw F4 1132.7 715.2 994.7 1135.2 813.4 1194.8 422 3.39 1 FALSE 1.14E-05 0.0001208 0.841 -250 119030 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YLAADKDGNVTCER [R].yLAADkDGNVTcER.[E] N-Term(TMT6plex); K6(TMT6plex); C12(Carbamidomethyl) 1 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 1 3 3 0.5556 0 1 1 1 690.69537 2070.07157 2070.06901 1.24 0.00085 0/0 0 0 8221687 HCD 30 MS2 0 493.3 110 76.65 23638 23638 23633 QEplus033719.raw F4 411.1 726 585.6 356.8 521.3 359.3 330 3.69 1 FALSE 1.14E-05 4.51E-10 1.873 -250 119049 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVQLQENEIR [K].nVQLQENEIR.[G] N-Term(TMT6plex) 5 P63087 Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1 P63087; P63087-2; Q3U7K1; A0A0G2JGC1; A0A0G2JFF1 Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1; Isoform 2 of Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cc; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp1cc PE=2 SV=1; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1; Serine/threonine-protein phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1 0 2 2 0.6904 0 1 1 1 736.40692 1471.80657 1471.80662 -0.04 -0.00003 0/0 0 0 4555086.5 HCD 30 MS2 0 275.1 110 76.655 23640 23640 23633 QEplus033719.raw F4 260.6 287.6 325.3 196.6 300.3 280 318 3.94 1 FALSE 1.14E-05 1.20E-07 1.412 -250 119071 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYIPPK [K].tYIPPk.[G] N-Term(TMT6plex); K6(TMT6plex) 12 Q8BNM0 High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 Q8BQ02; Q8BNM0; Q6P202; Q58EV5; Q3UJK0; Q8C7C4; D3YZ18; D3YVC6; Q3UBK2; A0A0J9YUZ4; A0A0J9YUD8; Q497Z6 High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=8; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein B1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 0 2 2 0.4714 0 1 1 1 588.87573 1176.74419 1176.73927 4.18 0.00246 0/0 0 0 22167988 HCD 30 MS2 39.34431 946.9 39.301 76.6618 23643 23643 23633 QEplus033719.raw F4 972.8 861.5 976.2 671.9 1309.6 889.5 210 2.1 1 FALSE 0.004873 0.08523 0.047 -250 119081 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSVNVK [K].vSVNVk.[T] N-Term(TMT6plex); K6(TMT6plex) 3 O54724 Caveolae-associated protein 1 OS=Mus musculus OX=10090 GN=Cavin1 PE=1 SV=1 O54724; Q3TER0; Q3U4N4 Caveolae-associated protein 1 OS=Mus musculus OX=10090 GN=Cavin1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cavin1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cavin1 PE=2 SV=1 0 2 2 0.2616 0 1 1 1 552.36377 1103.72026 1103.71887 1.27 0.0007 0/0 0 0 25865866 HCD 30 MS2 34.77217 1476.3 71.446 76.6691 23645 23645 23644 QEplus033719.raw F4 1447.6 1442 1682.1 1126.1 1608.6 1551.5 163 2.37 1 FALSE 0.003953 0.07375 0.078 -250 119104 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FGSGMNMGR [R].fGSGMNMGR.[I] N-Term(TMT6plex) 10 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; Q9D0E1-2; Q3TL61; F6W322; F7C9U3; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 2 2 0.5793 0 1 1 1 593.28894 1185.5706 1185.57061 -0.01 0 0/0 0 0 47078508 HCD 30 MS2 38.23303 1235.5 35.839 76.6761 23648 23648 23644 QEplus033719.raw F4 1204.6 1106.7 1432.8 1102.4 1242.1 1324.2 48 2.71 1 FALSE 1.14E-05 0.0002536 0.78 -250 119133 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MAPTPIPTR [R].mAPTPIPTR.[S] N-Term(TMT6plex) 3 A0A0R4J1E3 Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1 Q9QXS6-3; Q9QXS6; A0A0R4J1E3 Isoform E2 of Drebrin OS=Mus musculus OX=10090 GN=Dbn1; Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=4; Drebrin OS=Mus musculus OX=10090 GN=Dbn1 PE=1 SV=1 0 2 2 0.6554 0 1 1 1 606.85205 1212.69682 1212.69719 -0.3 -0.00018 0/0 0 0 14583294 HCD 30 MS2 0 1034.8 110 76.6831 23651 23651 23644 QEplus033719.raw F4 1030.2 837.5 1249.5 792.9 1147.3 1151.5 282 2.67 1 FALSE 2.26E-05 0.0009765 0.664 -250 119140 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RSTVAQLVK [K].rSTVAQLVk.[R] N-Term(TMT6plex); K9(TMT6plex) 2 Q03265 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1" Q03265; D3Z6F5 "ATP synthase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1a PE=1 SV=1; ATP synthase subunit alpha OS=Mus musculus OX=10090 GN=Atp5a1 PE=1 SV=1" 1 4 4 0.2833 0 1 1 1 365.73959 1459.93654 1459.93607 0.33 0.00012 0/0 0 0 11549435 HCD 30 MS2 17.43043 483.6 110 76.6856 23652 23652 23644 QEplus033719.raw F4 556 327.4 514.1 472.3 409.5 622.2 266 3 1 FALSE 3.35E-05 0.001133 0.651 -250 119146 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MESYAQAASDASR [K].mESYAQAASDASR.[A] N-Term(TMT6plex) 2 Q8CGY6 Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b PE=1 SV=1 Q8CGY6; Q8CGY6-2 Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b PE=1 SV=1; Isoform 2 of Protein unc-45 homolog B OS=Mus musculus OX=10090 GN=Unc45b 0 2 2 0.623 0 1 1 1 808.3822 1615.75713 1615.75835 -0.76 -0.00061 0/0 0 0 7486229 HCD 30 MS2 11.75732 393.9 110 76.6881 23653 23653 23644 QEplus033719.raw F4 378.2 139.8 481.9 571.9 126.2 665.1 59 4.88 1 FALSE 1.14E-05 1.81E-12 2.328 -250 119151 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQNFNTGIK [K].qQNFNTGIk.[D] N-Term(TMT6plex); K9(TMT6plex) 9 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; B2RXX6; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 2 2 0.6239 0 1 1 1 754.4364 1507.86553 1507.8633 1.48 0.00111 0/0 0 0 5522187 HCD 30 MS2 0 586.6 110 76.6906 23654 23654 23644 QEplus033719.raw F4 602.6 472.9 719 483.4 564.3 677.4 464 4.44 2 FALSE 1.14E-05 0.0001474 0.825 -250 119158 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IDEPLEGSEDR [K].iDEPLEGSEDR.[I] N-Term(TMT6plex) 11 Q5FWJ5 Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 P61979-3; Q3U9Q3; Q3TUA1; Q5FWJ5; P61979; H3BLL4; B2M1R6; Q3TG17; Q3U6X2; Q3TL71; Q3TJ38 Isoform 3 of Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 0 2 2 0.6569 0 1 1 1 744.87286 1488.73845 1488.73793 0.35 0.00026 0/0 0 0 18428580 HCD 30 MS2 19.27388 523.5 110 76.698 23656 23656 23655 QEplus033719.raw F4 504.8 466.7 560.6 393.3 634.4 581.1 115 4.08 1 FALSE 1.14E-05 1.19E-09 1.793 -250 119176 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SMSVYCTPNKPSR [K].sMSVYcTPNkPSR.[T] N-Term(TMT6plex); C6(Carbamidomethyl); K10(TMT6plex) 4 O55143-2; O55143 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2 O55143-2; O55143; Q5DTI2; O54994 Isoform 2 of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus OX=10090 GN=Atp2a2 PE=1 SV=2; P-type Ca(2+) transporter (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1; Sarcoplasmic reticulum Ca2+-ATPase (Fragment) OS=Mus musculus OX=10090 GN=Atp2a2 PE=2 SV=1 0 3 3 0.7046 0 1 1 1 662.35028 1985.03629 1985.03487 0.71 0.00047 0/0 0 0 72638632 HCD 30 MS2 31.76646 987.1 27.181 76.7027 23658 23658 23655 QEplus033719.raw F4 1033 538.5 909.4 1339 822.9 1280 322 4.74 2 FALSE 1.14E-05 3.34E-11 2.088 -250 119193 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEHLAEK [R].lEHLAEk.[F] N-Term(TMT6plex); K7(TMT6plex) 3 Q9JI91 Alpha-actinin-2 OS=Mus musculus OX=10090 GN=Actn2 PE=1 SV=2 Q5FW75; Q9JI91; Q8K3Q4 Actinin alpha 2 OS=Mus musculus OX=10090 GN=Actn2 PE=2 SV=1; Alpha-actinin-2 OS=Mus musculus OX=10090 GN=Actn2 PE=1 SV=2; Actinin alpha 2 OS=Mus musculus OX=10090 GN=Actn2 PE=2 SV=1 0 3 3 0.1594 0 1 1 2 433.26849 1297.79093 1297.78801 2.25 0.00097 0/0 0 0 16185823 HCD 30 MS2 29.12918 732.8 61.104 76.7073 23660 23660 23655 QEplus033719.raw F4 802.9 265.2 709.4 949.1 348.2 1321.8 228 3.45 1 FALSE 0.0001401 0.0032 0.551 -250 119198 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TESGATLTVK [K].tESGATLTVk.[E] N-Term(TMT6plex); K10(TMT6plex) 4 P13542 Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q1WNQ0; Q8BGE8; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Perinatal myosin heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.4948 0 1 1 1 732.93738 1464.86748 1464.86738 0.07 0.00005 0/0 0 0 12538386 HCD 30 MS2 36.27931 826.4 110 76.7098 23661 23661 23655 QEplus033719.raw F4 901.1 411.2 651.6 1232.2 496.9 1265.7 409 3.86 1 FALSE 1.14E-05 2.89E-08 1.53 -250 119208 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LNMTPEEAER [K].lNMTPEEAER.[W] N-Term(TMT6plex) 2 Q3UIG0 Eukaryotic translation initiation factor 3 subunit E OS=Mus musculus OX=10090 GN=Eif3e PE=1 SV=1 Q9CT23; Q3UIG0 PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3e PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit E OS=Mus musculus OX=10090 GN=Eif3e PE=1 SV=1 0 2 2 0.6497 0 1 1 1 709.86102 1418.71477 1418.7147 0.05 0.00004 0/0 0 0 9548718 HCD 30 MS2 29.69737 595.2 110 76.7123 23662 23662 23655 QEplus033719.raw F4 604.8 450.2 727.2 532.6 555.4 701.1 162 3.94 1 FALSE 1.14E-05 7.22E-05 0.884 -250 119225 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQAEATKPPAEACEELR [K].eQAEATkPPAEAcEELR.[S] N-Term(TMT6plex); K7(TMT6plex); C13(Carbamidomethyl) 2 Q9EP71 Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1 Q9EP71; A0A2I3BPY7 Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1; Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1 0 3 3 0.7163 0 1 1 1 796.41583 2387.23294 2387.2277 2.2 0.00175 0/0 0 0 3588772.25 HCD 30 MS2 0 229.8 110 76.7173 23664 23664 23655 QEplus033719.raw F4 212.5 249.4 275.8 176.2 269.6 195.3 340 5.04 1 FALSE 1.14E-05 6.13E-14 2.607 -250 119255 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIVNGLR [K].dIVNGLR.[S] N-Term(TMT6plex) 6 Q3TRH8; P47757 F-actin-capping protein subunit beta OS=Mus musculus OX=10090 GN=Capzb PE=2 SV=1;F-actin-capping protein subunit beta OS=Mus musculus OX=10090 GN=Capzb PE=1 SV=3 Q3TRH8; P47757; P47757-4; P47757-2; A2AMW0; Q3TVK4 F-actin-capping protein subunit beta OS=Mus musculus OX=10090 GN=Capzb PE=2 SV=1; F-actin-capping protein subunit beta OS=Mus musculus OX=10090 GN=Capzb PE=1 SV=3; Isoform 3 of F-actin-capping protein subunit beta OS=Mus musculus OX=10090 GN=Capzb; Isoform 2 of F-actin-capping protein subunit beta OS=Mus musculus OX=10090 GN=Capzb; F-actin-capping protein subunit beta OS=Mus musculus OX=10090 GN=Capzb PE=1 SV=1; F-actin-capping protein subunit beta OS=Mus musculus OX=10090 GN=Capzb PE=2 SV=1 0 2 2 0.2719 0 1 1 1 508.30939 1015.6115 1015.60976 1.71 0.00087 0/0 0 0 31619886 HCD 30 MS2 26.26567 866.9 35.494 76.7319 23669 23669 23666 QEplus033719.raw F4 876.4 701.9 957.6 730.4 980.8 954.2 328 2.17 2 FALSE 0.00274 0.05412 0.13 -250 119264 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SRFDLEK [K].sRFDLEk.[Y] N-Term(TMT6plex); K7(TMT6plex) 2 Q3UMR5 "Calcium uniporter protein, mitochondrial OS=Mus musculus OX=10090 GN=Mcu PE=1 SV=2" Q3UMR5; Q3UMR5-2 "Calcium uniporter protein, mitochondrial OS=Mus musculus OX=10090 GN=Mcu PE=1 SV=2; Isoform 2 of Calcium uniporter protein, mitochondrial OS=Mus musculus OX=10090 GN=Mcu" 1 3 3 0.3193 0 1 1 1 451.60309 1352.79471 1352.79382 0.66 0.0003 0/0 0 0 29642082 HCD 30 MS2 40.8913 934.4 39.112 76.7342 23670 23670 23666 QEplus033719.raw F4 1097.3 538.4 894.5 1015.7 811.4 1249 371 2.85 1 FALSE 0.005954 0.09859 0.01 -250 119272 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALEHAFK [K].aLEHAFk.[L] N-Term(TMT6plex); K7(TMT6plex) 1 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 3 3 0.4661 0 1 1 1 425.26041 1273.76667 1273.76688 -0.17 -0.00007 0/0 0 0 28003832 HCD 30 MS2 23.92933 580.9 42.927 76.7364 23671 23671 23666 QEplus033719.raw F4 614.5 440.3 630.9 514.3 594.5 691 424 3.39 1 FALSE 1.14E-05 0.0002397 0.784 -250 119288 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLNPEFNER [R].tLNPEFNER.[F] N-Term(TMT6plex) 1 Q3U7R1 Extended synaptotagmin-1 OS=Mus musculus OX=10090 GN=Esyt1 PE=1 SV=2 Q3U7R1 Extended synaptotagmin-1 OS=Mus musculus OX=10090 GN=Esyt1 PE=1 SV=2 0 2 2 0.6697 0 1 1 1 674.85706 1348.70683 1348.70585 0.73 0.00049 0/0 0 0 14266446 HCD 30 MS2 9.191279 801.5 110 76.7412 23673 23673 23666 QEplus033719.raw F4 794.6 702 876.2 658.4 928.7 848.8 210 3.33 1 FALSE 1.14E-05 2.86E-06 1.151 -250 119296 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSQETASTVQK [K].lSQETASTVQk.[E] N-Term(TMT6plex); K11(TMT6plex) 4 B1ARU4 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1 B1ARU4; E9QA63; Q9QXZ0; E9PVY8 Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=1; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2; Microtubule-actin cross-linking factor 1 OS=Mus musculus OX=10090 GN=Macf1 PE=1 SV=2 0 2 2 0.6437 0 1 1 1 825.47821 1649.94914 1649.94742 1.04 0.00086 0/0 0 0 3648775.25 HCD 30 MS2 0 212.2 110 76.7437 23674 23674 23666 QEplus033719.raw F4 217.9 94.9 260.2 211.9 127.9 360.6 468 4.21 1 FALSE 1.14E-05 4.90E-10 1.866 -250 119313 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAEEKLPSDTEK [K].eAEEkLPSDTEk.[E] N-Term(TMT6plex); K5(TMT6plex); K12(TMT6plex) 2 Q99P72 Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4 PE=1 SV=2 Q99P72-3; Q99P72 Isoform D of Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4; Reticulon-4 OS=Mus musculus OX=10090 GN=Rtn4 PE=1 SV=2 1 3 3 0.6827 0 1 1 1 688.38794 2063.14927 2063.14753 0.84 0.00058 0/0 0 0 24911644 HCD 30 MS2 9.073592 1012.5 110 76.7558 23678 23678 23677 QEplus033719.raw F4 1094.7 447.1 1089.6 1506.9 599.6 1337.2 450 3.12 1 FALSE 1.14E-05 1.01E-07 1.427 -250 119324 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLEEVK [K].dLEEVk.[QV] N-Term(TMT6plex); K6(TMT6plex) 7 P15497; Q9CXW3 SWISS-PROT:P15497 (Bos taurus) Apolipoprotein A-I precursor;Calcyclin-binding protein OS=Mus musculus OX=10090 GN=Cacybp PE=1 SV=1 A0A1L1STX7; P15497; A0A0A6YY29; Q00623; Q9CXW3; Q3V2G1; Q58EV2 Apolipoprotein A-I (Fragment) OS=Mus musculus OX=10090 GN=Apoa1 PE=1 SV=1; SWISS-PROT:P15497 (Bos taurus) Apolipoprotein A-I precursor; Calcyclin-binding protein (Fragment) OS=Mus musculus OX=10090 GN=Cacybp PE=1 SV=1; Apolipoprotein A-I OS=Mus musculus OX=10090 GN=Apoa1 PE=1 SV=2; Calcyclin-binding protein OS=Mus musculus OX=10090 GN=Cacybp PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Apoa1 PE=2 SV=1; Apoa1 protein OS=Mus musculus OX=10090 GN=Apoa1 PE=2 SV=1 0 2 2 0.1336 0 1 1 1 595.85547 1190.70366 1190.70328 0.32 0.00019 0/0 0 0 97734000 HCD 30 MS2 22.78125 1051.1 14.245 76.7606 23680 23680 23677 QEplus033719.raw F4 1078.8 789.5 1097.6 758.1 1504.5 1077.9 445 2.32 2 TRUE 0.005472 0.09274 0.027 -250 119334 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSELMDPK [K].nSELMDPk.[C] N-Term(TMT6plex); K8(TMT6plex) 3 F8WHM5 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 F8WHM5; Q61543; F6RSH1 Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1; Golgi apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Glg1 PE=1 SV=1 0 2 2 0.6678 0 1 1 1 696.38416 1391.76103 1391.76047 0.4 0.00028 0/0 0 0 17818698 HCD 30 MS2 5.129414 910.3 110 76.7631 23681 23681 23677 QEplus033719.raw F4 892 853.5 1047 727.9 1000.4 940.9 404 2.83 1 FALSE 1.14E-05 0.0002578 0.778 -250 119341 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQEQMKPLEEKQEEER [R].nQEQMkPLEEkQEEER.[S] N-Term(TMT6plex); K6(TMT6plex); K11(TMT6plex) 1 P62192 26S proteasome regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmc1 PE=1 SV=1 P62192 26S proteasome regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmc1 PE=1 SV=1 1 4 4 0.6096 0 1 1 1 683.86829 2732.45131 2732.4492 0.77 0.00053 0/0 0 0 9466220 HCD 30 MS2 14.18725 799.9 110 76.7656 23682 23682 23677 QEplus033719.raw F4 821.5 685.6 975.6 782.5 632 902.4 455 2.92 1 FALSE 1.14E-05 3.95E-07 1.314 -250 119348 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAVSQVPR [R].lAVSQVPR.[S] N-Term(TMT6plex) 2 P40142 Transketolase OS=Mus musculus OX=10090 GN=Tkt PE=1 SV=1 A0A286YE28; P40142 Transketolase (Fragment) OS=Mus musculus OX=10090 GN=Tkt PE=1 SV=1; Transketolase OS=Mus musculus OX=10090 GN=Tkt PE=1 SV=1 0 2 2 0.5604 0 1 1 1 549.8454 1098.68352 1098.68326 0.24 0.00013 0/0 0 0 15615627 HCD 30 MS2 20.986 1153.7 110 76.7681 23683 23683 23677 QEplus033719.raw F4 1159.9 994.6 1291.1 919.6 1255.8 1301.2 116 2.73 1 FALSE 0.0004793 0.007628 0.446 -250 119357 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASVPLVQGH [K].aSVPLVQGH.[-] N-Term(TMT6plex) 3 Q3UYN1 Pyridoxal phosphate homeostasis protein OS=Mus musculus OX=10090 GN=Plpbp PE=2 SV=1 Q3UYN1; Q544R1; A0A1B0GRP7 Pyridoxal phosphate homeostasis protein OS=Mus musculus OX=10090 GN=Plpbp PE=2 SV=1; Pyridoxal phosphate homeostasis protein OS=Mus musculus OX=10090 GN=Plpbp PE=1 SV=1; Pyridoxal phosphate homeostasis protein (Fragment) OS=Mus musculus OX=10090 GN=Plpbp PE=1 SV=1 0 2 2 0.6126 0 1 1 1 568.83569 1136.66411 1136.66252 1.4 0.00079 0/0 0 0 11358006 HCD 30 MS2 18.74092 928.7 110 76.7706 23684 23684 23677 QEplus033719.raw F4 905.6 788.1 973 714.2 1092.6 1099 308 3.33 1 FALSE 1.14E-05 1.96E-05 0.992 -250 119366 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGSDGESIGNCPFSQR [K].aGSDGESIGNcPFSQR.[L] N-Term(TMT6plex); C11(Carbamidomethyl) 1 Q9QYB1 Chloride intracellular channel protein 4 OS=Mus musculus OX=10090 GN=Clic4 PE=1 SV=3 Q9QYB1 Chloride intracellular channel protein 4 OS=Mus musculus OX=10090 GN=Clic4 PE=1 SV=3 0 2 2 0.7792 0 1 1 1 955.94757 1910.88786 1910.8864 0.76 0.00073 0/0 0 0 4896840.5 HCD 30 MS2 0 326.7 110 76.7732 23685 23685 23677 QEplus033719.raw F4 331 329.2 364 271.4 371.1 293.3 45 5.57 1 FALSE 1.14E-05 6.31E-16 3.068 -250 119372 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AWNNQVCCK [K].aWNNQVcck.[D] N-Term(TMT6plex); C7(Carbamidomethyl); C8(Carbamidomethyl); K9(TMT6plex) 2 Q61191 Host cell factor 1 OS=Mus musculus OX=10090 GN=Hcfc1 PE=1 SV=2 Q61191; B1AUX2 Host cell factor 1 OS=Mus musculus OX=10090 GN=Hcfc1 PE=1 SV=2; Host cell factor 1 OS=Mus musculus OX=10090 GN=Hcfc1 PE=1 SV=1 0 3 3 0.5023 0 1 1 1 546.61487 1637.83005 1637.82924 0.5 0.00027 0/0 0 0 6833140 HCD 30 MS2 64.35507 1374.8 110 76.7757 23686 23686 23677 QEplus033719.raw F4 1359.8 1305.7 1471.5 1000.5 1748 1363.5 203 2.15 1 FALSE 0.0009729 0.01309 0.358 -250 119379 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVLGEADQK [R].sVLGEADQk.[G] N-Term(TMT6plex); K9(TMT6plex) 6 Q6XMP4 Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1 Q6XMP4; Q8R346; Q8BGQ7; Q6PDM7; Q3TZ32; Q3UD67 "Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=2; Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1" 0 2 2 0.5175 0 1 1 1 702.90924 1404.8112 1404.80987 0.95 0.00067 0/0 0 0 3208598.25 HCD 30 MS2 0 538.5 110 76.7782 23687 23687 23677 QEplus033719.raw F4 553 478.1 554 430.2 674.5 541.3 486 3.71 1 FALSE 1.14E-05 7.85E-07 1.257 -250 119400 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CSGPGLSPGMVR [K].cSGPGLSPGMVR.[A] N-Term(TMT6plex); C1(Carbamidomethyl) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.6456 0 1 1 1 723.87384 1446.7404 1446.73947 0.65 0.00047 0/0 0 0 48302008 HCD 30 MS2 0 551.8 43.138 76.79 23691 23691 23688 QEplus033719.raw F4 562 575.9 604.3 344.2 757.4 467 195 4.43 1 FALSE 1.14E-05 2.24E-11 2.12 -250 119405 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVIDLNNR [K].aVIDLNNR.[W] N-Term(TMT6plex) 3 Q14C24 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 OS=Mus musculus OX=10090 GN=U2af1 PE=1 SV=1 G3UW94; Q14C24; A0A494B947 Splicing factor U2AF 35 kDa subunit OS=Mus musculus OX=10090 GN=U2af1 PE=1 SV=1; U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 OS=Mus musculus OX=10090 GN=U2af1 PE=1 SV=1; Splicing factor U2AF 35 kDa subunit (Fragment) OS=Mus musculus OX=10090 GN=U2af1 PE=1 SV=1 0 2 2 0.5312 0 1 1 1 572.33826 1143.66924 1143.66834 0.79 0.00045 0/0 0 0 32610388 HCD 30 MS2 25.50154 1000.8 50.496 76.7923 23692 23692 23688 QEplus033719.raw F4 925.5 1004.8 1174.7 738.2 1119.6 1042 276 2.88 1 FALSE 2.26E-05 0.001021 0.66 -250 119415 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHVAPCFDASK [K].aHVAPcFDASk.[V] N-Term(TMT6plex); C6(Carbamidomethyl); K11(TMT6plex) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.654 0 1 1 1 554.30212 1660.89182 1660.88813 2.22 0.00123 0/0 0 0 19314502 HCD 30 MS2 49.9492 1057.4 72.419 76.7945 23693 23693 23688 QEplus033719.raw F4 1000 1113.4 1121.4 748.3 1376.1 985.1 378 4.48 1 FALSE 1.14E-05 2.31E-07 1.358 -250 119434 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGPQLVCTGSDDGTVK [R].rGPQLVcTGSDDGTVk.[LV] N-Term(TMT6plex); C7(Carbamidomethyl); K16(TMT6plex) 2 Q6PE01 U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus OX=10090 GN=Snrnp40 PE=1 SV=1 Q6PE01; Q3UFK4 U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus OX=10090 GN=Snrnp40 PE=1 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Snrnp40 PE=2 SV=1 1 3 3 0.7078 0 1 1 1 716.72192 2148.15122 2148.14832 1.35 0.00097 0/0 0 0 14197049 HCD 30 MS2 0 550.1 110 76.7993 23695 23695 23688 QEplus033719.raw F4 570.4 513 605.3 409.3 622 580.8 385 6.4 1 FALSE 1.14E-05 6.31E-16 3.435 -250 119439 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQNFNTGIK [K].qQNFNTGIk.[D] N-Term(TMT6plex); K9(TMT6plex) 9 P16546; P16546-2 "Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4;Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1" B9EKJ1; E9Q447; B2RXX6; A3KGU9; P16546; B7ZWK3; P16546-2; A3KGU7; A3KGU5 "Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=2; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=4; Spna2 protein OS=Mus musculus OX=10090 GN=Sptan1 PE=2 SV=1; Isoform 2 of Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1; Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptan1 PE=1 SV=1" 0 3 3 0.6237 0 1 1 1 503.29236 1507.86252 1507.8633 -0.51 -0.00026 0/0 0 0 9850372 HCD 30 MS2 34.52455 852.9 110 76.8018 23696 23696 23688 QEplus033719.raw F4 872.1 661.7 953.1 657.1 896.5 1076.8 433 3.96 2 FALSE 1.14E-05 0.0003101 0.763 -250 119448 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSVNVK [K].vSVNVk.[T] N-Term(TMT6plex); K6(TMT6plex) 3 O54724 Caveolae-associated protein 1 OS=Mus musculus OX=10090 GN=Cavin1 PE=1 SV=1 O54724; Q3TER0; Q3U4N4 Caveolae-associated protein 1 OS=Mus musculus OX=10090 GN=Cavin1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cavin1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Cavin1 PE=2 SV=1 0 3 3 0.2588 0 1 1 1 368.57785 1103.719 1103.71887 0.12 0.00004 0/0 0 0 9103539 HCD 30 MS2 0 446.5 110 76.8043 23697 23697 23688 QEplus033719.raw F4 398.8 419.2 519.6 365.6 474.4 501.5 104 2.28 1 FALSE 0.009949 0.1961 -0.131 -250 119458 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YICTTSAIQNR [K].yIcTTSAIQNR.[F] N-Term(TMT6plex); C3(Carbamidomethyl) 5 Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1;ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TS02; Q3TED3; Q3UEA1; Q3V117; Q91V92 ATP citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate (pro-S-)-lyase (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 0 2 2 0.6577 0 1 1 1 778.40698 1555.80669 1555.80999 -2.12 -0.00165 0/0 0 0 23310006 HCD 30 MS2 35.11214 742.9 67.334 76.8066 23698 23698 23688 QEplus033719.raw F4 835.3 602.7 807.9 640.6 812.9 758 231 3.71 2 FALSE 1.14E-05 2.77E-07 1.343 -250 119466 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SAGAMLKPHAPK [K].sAGAMLkPHAPk.[L] N-Term(TMT6plex); K7(TMT6plex); K12(TMT6plex) 3 Q6PDI5 Proteasome adapter and scaffold protein ECM29 OS=Mus musculus OX=10090 GN=Ecpas PE=1 SV=3 Q6PDI5-2; A2ALV7; Q6PDI5 Isoform 2 of Proteasome adapter and scaffold protein ECM29 OS=Mus musculus OX=10090 GN=Ecpas; Proteasome adapter and scaffold protein ECM29 (Fragment) OS=Mus musculus OX=10090 GN=Ecpas PE=1 SV=1; Proteasome adapter and scaffold protein ECM29 OS=Mus musculus OX=10090 GN=Ecpas PE=1 SV=3 0 4 4 0.5132 0 1 1 1 474.5426 1895.14858 1895.15038 -0.95 -0.00045 0/0 0 0 5160723 HCD 30 MS2 55.02771 963 110 76.8139 23700 23700 23699 QEplus033719.raw F4 1091.2 698.6 1006 954 1077.6 950.8 284 3.04 1 FALSE 0.0005556 0.008388 0.432 -250 119474 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGETVTLK [R].eGETVTLk.[C] N-Term(TMT6plex); K8(TMT6plex) 2 Q3UQS9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1 Q3UQS9; Q14BI5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1; Myomesin 2 OS=Mus musculus OX=10090 GN=Myom2 PE=1 SV=1 0 2 2 0.3613 0 1 1 1 667.90216 1334.79704 1334.79315 2.92 0.00195 0/0 0 0 13265500 HCD 30 MS2 58.22205 1173.8 110 76.8164 23701 23701 23699 QEplus033719.raw F4 1282.4 656.3 1004.1 1765.2 782.6 1552.2 399 2.74 1 FALSE 1.14E-05 0.0001974 0.8 -250 119502 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YICTTSAIQNR [K].yIcTTSAIQNR.[F] N-Term(TMT6plex); C3(Carbamidomethyl) 5 Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1;ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TS02; Q3TED3; Q3UEA1; Q3V117; Q91V92 ATP citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate (pro-S-)-lyase (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 0 2 2 0.6543 0 1 1 1 778.41174 1555.81621 1555.80999 4 0.00311 0/0 0 0 23245242 HCD 30 MS2 31.02178 709.8 60.508 76.8277 23706 23706 23699 QEplus033719.raw F4 785.5 563.9 763.5 633.2 752.8 760.1 235 3.76 2 FALSE 1.14E-05 3.88E-07 1.315 -250 119510 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIDENAYAK [K].dIDENAYAk.[V] N-Term(TMT6plex); K9(TMT6plex) 7 Q3TWL6 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1 Q3TI61; Q3TWL6; Q3TW71; Q3U9Y8; Q3TIP0; Q8VDM4; Q3TXV1 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1 0 3 3 0.6316 0 1 1 1 499.6051 1496.80075 1496.79969 0.71 0.00035 0/0 0 0 20744122 HCD 30 MS2 26.87536 924.8 69.292 76.83 23707 23707 23699 QEplus033719.raw F4 975.2 739.1 998.1 746.7 1026.5 1063 310 3.42 1 FALSE 0.0006383 0.009739 0.409 -250 119527 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAEDEAFQR [R].lAEDEAFQR.[R] N-Term(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.7493 0 1 1 1 654.34393 1307.68059 1307.6793 0.99 0.00065 0/0 0 0 18482224 HCD 30 MS2 13.87833 1122.5 110 76.8347 23709 23709 23699 QEplus033719.raw F4 1146.2 919.4 1108.5 999.4 979 1582.6 197 3.43 2 FALSE 1.14E-05 1.56E-05 1.011 -250 119536 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSFTVDCSK [K].nSFTVDcSk.[A] N-Term(TMT6plex); C7(Carbamidomethyl); K9(TMT6plex) 3 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q3UXJ8; Q8VHX6-2; Q8VHX6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flnc PE=2 SV=1; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 2 2 0.1093 0 1 1 1 758.39752 1515.78777 1515.78775 0.01 0.00001 0/0 0 0 12415079 HCD 30 MS2 0 849.4 110 76.842 23711 23711 23710 QEplus033719.raw F4 988.8 575.2 1022.4 838.3 626.9 1044.5 213 3.75 1 FALSE 1.14E-05 4.75E-06 1.109 -250 119543 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEFSVK [K].sEFSVk.[R] N-Term(TMT6plex); K6(TMT6plex) 3 Q9CWK8 Sorting nexin-2 OS=Mus musculus OX=10090 GN=Snx2 PE=1 SV=2 Q9CWK8; Q3U5L3; Q91VZ1 Sorting nexin-2 OS=Mus musculus OX=10090 GN=Snx2 PE=1 SV=2; Sorting nexin-2 OS=Mus musculus OX=10090 GN=Snx2 PE=2 SV=1; Sorting nexin-2 OS=Mus musculus OX=10090 GN=Snx2 PE=2 SV=1 0 2 2 0.1931 0 1 1 1 577.84528 1154.68328 1154.68215 0.98 0.00056 0/0 0 0 10928139 HCD 30 MS2 0 1241.7 110 76.8446 23712 23712 23710 QEplus033719.raw F4 1259.3 1171.1 1408.2 989.7 1334.9 1287.2 187 2.33 1 FALSE 0.004228 0.07762 0.068 -250 119557 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHFGTTGK [R].iHFGTTGk.[L] N-Term(TMT6plex); K8(TMT6plex) 8 Q5SX40; P13541; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q5SX40; P13541; G3UW82; B2RWX0; Q8BLW0; I6L963; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 3 3 0.5855 0 1 1 1 440.26801 1318.78946 1318.78834 0.85 0.00037 0/0 0 0 30479358 HCD 30 MS2 20.26417 629.3 36.473 76.8491 23714 23714 23710 QEplus033719.raw F4 871.2 179.7 517.7 1127.3 233.7 846.1 467 3.45 3 FALSE 1.14E-05 0.0001438 0.827 -250 119565 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DAMQYASESK [K].dAMQYASESk.[D] N-Term(TMT6plex); K10(TMT6plex) 7 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 F6Z1R4; Q80U89; Q68FD5; Q5SXR6; Q3UPJ3; Q3TJ98; Q8K2I5 Clathrin heavy chain 1 (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1; Cltc protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1 0 2 2 0.7259 0 1 1 1 794.41028 1587.81328 1587.80888 2.77 0.0022 0/0 0 0 25886744 HCD 30 MS2 16.08365 1187.1 110 76.8516 23715 23715 23710 QEplus033719.raw F4 1162.5 1025.7 1394.7 1093.8 1226.3 1219.7 197 4.56 1 FALSE 1.14E-05 2.36E-08 1.547 -250 119572 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTLNQIDSVK [K].hTLNQIDSVk.[V] N-Term(TMT6plex); K10(TMT6plex) 1 P12763 SWISS-PROT:P12763 (Bos taurus) Alpha-2-HS-glycoprotein precursor P12763 SWISS-PROT:P12763 (Bos taurus) Alpha-2-HS-glycoprotein precursor 0 3 3 0.6309 0 1 1 1 538.31903 1612.94254 1612.94228 0.16 0.00009 0/0 0 0 24056166 HCD 30 MS2 58.1405 927.1 32.773 76.8539 23716 23716 23710 QEplus033719.raw F4 945.9 638.3 923.9 588.6 1658.6 807.4 379 3.63 1 TRUE 1.14E-05 2.52E-06 1.161 -250 119581 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCTIVSPDAGGAK [R].ncTIVSPDAGGAk.[R] N-Term(TMT6plex); C2(Carbamidomethyl); K13(TMT6plex) 8 G3UXL2 Ribose-phosphate diphosphokinase OS=Mus musculus OX=10090 GN=Prps1l3 PE=3 SV=1 G3UXL2; Q3UPD5; Q32M04; Q3UYQ0; Q9CVZ1; Q8C5R8; Q3TI27; Q9D7G0 Ribose-phosphate diphosphokinase OS=Mus musculus OX=10090 GN=Prps1l3 PE=3 SV=1; Ribose-phosphate diphosphokinase OS=Mus musculus OX=10090 GN=Prps1 PE=2 SV=1; Ribose-phosphate diphosphokinase OS=Mus musculus OX=10090 GN=Prps1l1 PE=2 SV=1; Ribose-phosphate diphosphokinase OS=Mus musculus OX=10090 GN=Prps1l3 PE=2 SV=1; Ribose-phosphate diphosphokinase (Fragment) OS=Mus musculus OX=10090 GN=Prps1l1 PE=2 SV=1; Ribose-phosphate diphosphokinase OS=Mus musculus OX=10090 GN=Prps1l1 PE=1 SV=1; Ribose-phosphate diphosphokinase OS=Mus musculus OX=10090 GN=Prps1 PE=2 SV=1; Ribose-phosphate pyrophosphokinase 1 OS=Mus musculus OX=10090 GN=Prps1 PE=1 SV=4 0 3 3 0.6724 0 1 1 1 583.31934 1747.94345 1747.94129 1.24 0.00072 0/0 0 0 16631306 HCD 30 MS2 36.36303 1117.9 96.647 76.8607 23719 23719 23710 QEplus033719.raw F4 1062 985.2 1264.2 910.6 1248.3 1237 394 4.06 1 FALSE 1.14E-05 5.68E-08 1.474 -250 119588 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FMCGEK [K].fMcGEk.[Q] N-Term(TMT6plex); C3(Carbamidomethyl); K6(TMT6plex) 7 Q8C952 Flap endonuclease 1 OS=Mus musculus OX=10090 GN=Fen1 PE=2 SV=1 Q8C952; Q3TGH6; Q99M86; Q91Z50; Q8R069; P39749; Q8C5X6 Flap endonuclease 1 OS=Mus musculus OX=10090 GN=Fen1 PE=2 SV=1; Flap endonuclease 1 OS=Mus musculus OX=10090 GN=Fen1 PE=2 SV=1; Flap endonuclease 1 OS=Mus musculus OX=10090 GN=Fen1 PE=3 SV=1; Flap endonuclease 1 OS=Mus musculus OX=10090 GN=Fen1 PE=1 SV=1; Flap endonuclease 1 OS=Mus musculus OX=10090 GN=Fen1 PE=2 SV=1; Flap endonuclease 1 OS=Mus musculus OX=10090 GN=Fen1 PE=1 SV=1; Flap endonuclease 1 OS=Mus musculus OX=10090 GN=Fen1 PE=2 SV=1 0 2 2 0.6905 0 1 1 1 615.32507 1229.64287 1229.64227 0.49 0.0003 0/0 0 0 13841754 HCD 30 MS2 5.318031 1265.6 110 76.8632 23720 23720 23710 QEplus033719.raw F4 1193.2 1412.8 1255.1 699.3 2010.9 1022.2 149 2.1 1 FALSE 0.005962 0.09867 0.01 -250 119595 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQEGEIFDTEK [R].hQEGEIFDTEk.[E] N-Term(TMT6plex); K11(TMT6plex) 1 P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 0 3 3 0.8156 0 1 1 1 597.64954 1790.93406 1790.9325 0.87 0.00052 0/0 0 0 142140400 HCD 30 MS2 13.89411 440.1 7.665 76.875 23724 23724 23721 QEplus033719.raw F4 434.7 387.7 496.4 389.3 437.9 494.6 267 4.61 1 FALSE 1.14E-05 1.61E-08 1.578 -250 119611 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CQYLQAEK [R].cQYLQAEk.[K] N-Term(TMT6plex); C1(Carbamidomethyl); K8(TMT6plex) 3 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 A2VCK0; Q8VDD5; A0A2R8VKI5 Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-9 (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=1 0 2 2 0.4847 0 1 1 1 749.41022 1497.81316 1497.81357 -0.28 -0.00021 0/0 0 0 31669810 HCD 30 MS2 22.42874 1011.2 62.358 76.8795 23726 23726 23721 QEplus033719.raw F4 1049.9 1029.8 1180.1 799.4 1110.8 896.9 336 3.59 1 FALSE 1.14E-05 0.0002288 0.788 -250 119616 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSFTVDCSK [K].nSFTVDcSk.[A] N-Term(TMT6plex); C7(Carbamidomethyl); K9(TMT6plex) 3 Q8VHX6 Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 Q3UXJ8; Q8VHX6-2; Q8VHX6 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flnc PE=2 SV=1; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3 0 3 3 0 2 2 2 505.93442 1515.7887 1515.78775 0.63 0.00032 0/0 0 0 16126324 HCD 30 MS2 38.9713 825 37.651 76.8818 23727 23727 23721 QEplus033719.raw F4 844.1 680.8 903.2 727.5 856.6 937.6 215 3.61 1 FALSE 0.001607 0.02505 0.244 -250 119623 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CLEELQKR [K].cLEELQkR.[F] N-Term(TMT6plex); C1(Carbamidomethyl); K7(TMT6plex) 2 Q9R1P3 Proteasome subunit beta type-2 OS=Mus musculus OX=10090 GN=Psmb2 PE=1 SV=1 Q9R1P3; Q8BJX0 Proteasome subunit beta type-2 OS=Mus musculus OX=10090 GN=Psmb2 PE=1 SV=1; Proteasome subunit beta OS=Mus musculus OX=10090 GN=Psmb2 PE=2 SV=1 1 3 3 0.5273 0 1 1 1 511.96609 1533.88373 1533.88232 0.92 0.00047 0/0 0 0 11310667 HCD 30 MS2 40.981 1432 107.119 76.8842 23728 23728 23721 QEplus033719.raw F4 1550.2 1319 1579 1256.6 1422.4 1464.7 468 2.75 1 FALSE 0.001351 0.01926 0.288 -250 119640 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGETVTLK [R].eGETVTLk.[C] N-Term(TMT6plex); K8(TMT6plex) 2 Q3UQS9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1 Q3UQS9; Q14BI5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1; Myomesin 2 OS=Mus musculus OX=10090 GN=Myom2 PE=1 SV=1 0 2 2 0.4016 0 1 1 1 667.90118 1334.79509 1334.79315 1.45 0.00097 0/0 0 0 9619091 HCD 30 MS2 34.69952 992.7 110 76.8893 23730 23730 23721 QEplus033719.raw F4 1048.1 506.7 808.6 1607.7 637.8 1347.6 357 2.44 1 FALSE 1.14E-05 0.0003842 0.745 -250 119686 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQEGEIFDTEK [R].hQEGEIFDTEk.[E] N-Term(TMT6plex); K11(TMT6plex) 1 P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 0 2 2 0.7671 0 1 1 1 895.97015 1790.93303 1790.9325 0.3 0.00027 0/0 0 0 11710900 HCD 30 MS2 0 818.3 110 76.9088 23737 23737 23732 QEplus033719.raw F4 787.7 718.1 936.7 700.8 821.2 945.2 272 4.68 1 FALSE 1.14E-05 1.56E-09 1.77 -250 119698 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSDQTWVK [R].tSDQTWVk.[L] N-Term(TMT6plex); K8(TMT6plex) 2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q80U36; Q9JHU4 MKIAA0325 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 2 2 0.5789 0 1 1 1 711.90399 1422.80071 1422.7993 0.99 0.0007 0/0 0 0 11881355 HCD 30 MS2 20.77095 824.9 110 76.9139 23739 23739 23732 QEplus033719.raw F4 847.5 625.9 925 804.2 744 1002.6 443 3.04 1 FALSE 1.14E-05 0.0001711 0.812 -250 119704 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPLAGQQFTSR [K].tPLAGQQFTSR.[D] N-Term(TMT6plex) 2 Q9R059 Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=2 F2Z455; Q9R059 Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=1; Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=2 0 2 2 0.6571 0 1 1 1 717.9021 1434.79692 1434.79024 4.66 0.00334 0/0 0 0 8250676 HCD 30 MS2 0 547.8 110 76.9164 23740 23740 23732 QEplus033719.raw F4 543.2 437.8 587.4 560 505.8 652.6 422 3.85 1 FALSE 1.14E-05 2.26E-07 1.36 -250 119717 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHVAPCFDASK [K].aHVAPcFDASk.[V] N-Term(TMT6plex); C6(Carbamidomethyl); K11(TMT6plex) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.5966 0 1 1 1 830.94928 1660.89128 1660.88813 1.9 0.00158 0/0 0 0 4507524.5 HCD 30 MS2 0 347.7 110 76.9214 23742 23742 23732 QEplus033719.raw F4 364.5 364.9 363.7 241 476.8 275.1 374 3.52 1 FALSE 1.14E-05 9.57E-10 1.811 -250 119736 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEVLDSTK [R].aEVLDSTk.[S] N-Term(TMT6plex); K8(TMT6plex) 1 Q9CR68 "Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrfs1 PE=1 SV=1" Q9CR68 "Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Mus musculus OX=10090 GN=Uqcrfs1 PE=1 SV=1" 0 2 2 0.4222 0 1 1 1 660.89374 1320.7802 1320.7775 2.04 0.00135 0/0 0 0 29368584 HCD 30 MS2 40.91774 1154.4 52.876 76.931 23745 23745 23743 QEplus033719.raw F4 1222.1 825.7 1194.2 1348 968.9 1367.6 406 3.15 1 FALSE 1.14E-05 0.000253 0.78 -250 119744 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LNPYAK [K].lNPYAk.[T] N-Term(TMT6plex); K6(TMT6plex) 2 Q9D8E6 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3 Q9D8E6; Q9CSM5 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=1 SV=3; 60S ribosomal protein L4 OS=Mus musculus OX=10090 GN=Rpl4 PE=2 SV=2 0 2 2 0.1174 0 1 1 1 582.36407 1163.72087 1163.71887 1.72 0.001 0/0 0 0 62535024 HCD 30 MS2 28.74953 926.2 18.557 76.9332 23746 23746 23743 QEplus033719.raw F4 825.6 968.2 1114.9 682.9 1041.6 923.9 247 2.13 1 FALSE 0.005422 0.09244 0.027 -250 119754 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNPEPWNK [K].nNPEPWNk.[L] N-Term(TMT6plex); K8(TMT6plex) 2 Q62425 Cytochrome c oxidase subunit NDUFA4 OS=Mus musculus OX=10090 GN=Ndufa4 PE=1 SV=2 Q62425; A0A0N4SVQ1 Cytochrome c oxidase subunit NDUFA4 OS=Mus musculus OX=10090 GN=Ndufa4 PE=1 SV=2; Cytochrome c oxidase subunit NDUFA4 OS=Mus musculus OX=10090 GN=Ndufa4 PE=1 SV=1 0 2 2 0.6611 0 1 1 1 728.90173 1456.79619 1456.79488 0.9 0.00065 0/0 0 0 26844720 HCD 30 MS2 7.439375 755.9 72.426 76.9355 23747 23747 23743 QEplus033719.raw F4 801.3 561.6 793.8 737.1 712.2 929.5 295 3.01 1 FALSE 1.14E-05 0.0003988 0.741 -250 119769 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GKEDALVTK [R].gkEDALVTk.[N] N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex) 3 Q3UJS2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fbl PE=2 SV=1 Q3UJS2; P35550; A0A140LIR6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fbl PE=2 SV=1; rRNA 2'-O-methyltransferase fibrillarin OS=Mus musculus OX=10090 GN=Fbl PE=1 SV=2; rRNA 2'-O-methyltransferase fibrillarin (Fragment) OS=Mus musculus OX=10090 GN=Fbl PE=1 SV=1 1 3 3 0.6036 0 1 1 1 550.01337 1648.02555 1648.02483 0.43 0.00024 0/0 0 0 9405027 HCD 30 MS2 47.14672 1455.8 110 76.9428 23750 23750 23743 QEplus033719.raw F4 1568.5 1263.8 1674.3 1309.2 1352 1566.8 306 2.8 1 FALSE 1.14E-05 0.0008489 0.677 -250 119775 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTLNQIDSVK [K].hTLNQIDSVk.[V] N-Term(TMT6plex); K10(TMT6plex) 1 P12763 SWISS-PROT:P12763 (Bos taurus) Alpha-2-HS-glycoprotein precursor P12763 SWISS-PROT:P12763 (Bos taurus) Alpha-2-HS-glycoprotein precursor 0 2 2 0.4824 0 1 1 1 806.97461 1612.94194 1612.94228 -0.21 -0.00017 0/0 0 0 7700390.5 HCD 30 MS2 10.10743 510.3 110 76.9453 23751 23751 23743 QEplus033719.raw F4 547.5 161.1 203.4 117.9 1897.7 134.5 374 3.98 1 TRUE 1.14E-05 2.41E-08 1.545 -250 119784 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CFQIQGQDPQDR [K].cFQIQGQDPQDR.[V] N-Term(TMT6plex); C1(Carbamidomethyl) 1 Q14AX9 "Mannose receptor, C type 2 OS=Mus musculus OX=10090 GN=Mrc2 PE=2 SV=1" Q14AX9 "Mannose receptor, C type 2 OS=Mus musculus OX=10090 GN=Mrc2 PE=2 SV=1" 0 2 2 0.7002 0 1 1 1 860.9187 1720.83013 1720.82743 1.56 0.00135 0/0 0 0 3579065.5 HCD 30 MS2 0 200.8 110 76.9479 23752 23752 23743 QEplus033719.raw F4 180.7 182.8 236.6 143.3 232.2 229.3 116 4.27 1 FALSE 1.14E-05 7.75E-10 1.828 -250 119797 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVLGEADQK [R].sVLGEADQk.[G] N-Term(TMT6plex); K9(TMT6plex) 6 Q6XMP4 Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1 Q6XMP4; Q8R346; Q8BGQ7; Q6PDM7; Q3TZ32; Q3UD67 "Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=2; Alanine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Aars1 PE=1 SV=1; Aars protein (Fragment) OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1; Alanine--tRNA ligase OS=Mus musculus OX=10090 GN=Aars PE=2 SV=1" 0 3 3 0.5281 0 1 1 1 468.94193 1404.81122 1404.80987 0.97 0.00045 0/0 0 0 31446646 HCD 30 MS2 7.479587 677.9 50.12 76.9574 23755 23755 23754 QEplus033719.raw F4 662 596.6 761.3 570 760.9 716.8 486 3.92 1 FALSE 1.14E-05 3.96E-05 0.934 -250 119802 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNVFQAK [K].sNVFQAk.[F] N-Term(TMT6plex); K7(TMT6plex) 2 Q8N7N5 DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8 PE=1 SV=1 Q8N7N5-2; Q8N7N5 Isoform 2 of DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8; DDB1- and CUL4-associated factor 8 OS=Mus musculus OX=10090 GN=Dcaf8 PE=1 SV=1 0 2 2 0.5195 0 1 1 1 626.37689 1251.74651 1251.74614 0.29 0.00018 0/0 0 0 16822896 HCD 30 MS2 11.34213 1283.8 110 76.9599 23756 23756 23754 QEplus033719.raw F4 1248 1050.9 1410.4 1159.8 1383.3 1450.1 384 3.08 1 FALSE 0.0002719 0.005499 0.49 -250 119811 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYIPPK [K].tYIPPk.[G] N-Term(TMT6plex); K6(TMT6plex) 12 Q8BNM0 High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 Q8BQ02; Q8BNM0; Q6P202; Q58EV5; Q3UJK0; Q8C7C4; D3YZ18; D3YVC6; Q3UBK2; A0A0J9YUZ4; A0A0J9YUD8; Q497Z6 High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=8; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein B1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 0 2 2 0.2527 0 1 1 1 588.87268 1176.73808 1176.73927 -1 -0.00059 0/0 0 0 17876470 HCD 30 MS2 50.13867 1704.7 96.822 76.9645 23758 23758 23754 QEplus033719.raw F4 1747.6 1477.1 1827.3 1204.8 2204.4 1766.8 239 1.82 1 FALSE 0.005448 0.09251 0.027 -250 119821 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVTEIDEK [R].tVTEIDEk.[E] N-Term(TMT6plex); K8(TMT6plex) 2 Q4FK54 "Proteaseome (Prosome, macropain) 28 subunit, 3 OS=Mus musculus OX=10090 GN=Psme3 PE=1 SV=1" Q99K09; Q4FK54 "Psme3 protein (Fragment) OS=Mus musculus OX=10090 GN=Psme3 PE=2 SV=1; Proteaseome (Prosome, macropain) 28 subunit, 3 OS=Mus musculus OX=10090 GN=Psme3 PE=1 SV=1" 0 2 2 0.3907 0 1 1 1 696.90527 1392.80327 1392.79863 3.33 0.00232 0/0 0 0 11471456 HCD 30 MS2 23.63017 896 110 76.967 23759 23759 23754 QEplus033719.raw F4 914.4 799.7 952.2 694.8 1056.9 957.7 441 3.02 1 FALSE 1.14E-05 0.0001069 0.851 -250 119831 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQVDQEEPHTEEQQQQPQTPAENK [K].mQVDQEEPHTEEQQQQPQTPAENk.[A] N-Term(TMT6plex); K24(TMT6plex) 3 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1 0 4 4 0.7757 0 1 1 1 827.65192 3307.58584 3307.59012 -1.29 -0.00107 0/0 0 0 3874394.25 HCD 30 MS2 0 101.2 110 76.9695 23760 23760 23754 QEplus033719.raw F4 109.4 69.5 116.2 91.9 102.8 117.6 141 7.4 1 FALSE 1.14E-05 6.31E-16 3.698 -250 119837 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEAVLSR [K].vEAVLSR.[S] N-Term(TMT6plex) 3 Q99K41 EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1 Q99K41; Q3U254; Q3USG5 EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; C1q domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1 0 2 2 0.2523 0 1 1 1 501.80951 1002.61174 1002.61451 -2.76 -0.00138 0/0 0 0 7109142 HCD 30 MS2 46.70494 1130.6 110 76.972 23761 23761 23754 QEplus033719.raw F4 1064 992.7 1163.8 916.2 1281.3 1365.3 138 2.14 1 FALSE 0.00171 0.02856 0.224 -250 119846 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APLPWQHR [R].aPLPWQHR.[I] N-Term(TMT6plex) 3 E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1;Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 B1B0C7; E9PZ16; Q05793 Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1; Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 0 3 3 0.5931 0 1 1 1 411.90765 1233.70841 1233.70539 2.45 0.00101 0/0 0 0 6400575 HCD 30 MS2 0 343.7 110 76.9745 23762 23762 23754 QEplus033719.raw F4 343 281.2 374.8 266.9 416.3 379.9 467 3.17 2 FALSE 0.0003996 0.007264 0.453 -250 119855 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVIDPVAPR [K].kVIDPVAPR.[Y] N-Term(TMT6plex); K1(TMT6plex) 2 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 B9EIU1; Q8CGC7 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4 1 3 3 0.3129 0 1 1 1 484.98193 1452.93125 1452.93026 0.68 0.00033 0/0 0 0 44969324 HCD 30 MS2 29.25934 1228.7 46.558 76.9768 23763 23763 23754 QEplus033719.raw F4 1210.8 1086.1 1430.3 1102.8 1212.2 1330.1 124 3.1 1 FALSE 1.14E-05 0.0001907 0.803 -250 119863 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIAAHIKK [K].dIAAHIkk.[E] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 3 Q9D6F6 Dynein light chain OS=Mus musculus OX=10090 GN=Dynll1 PE=2 SV=1 Q80ZS7; Q9D6F6; P63168 "Dynein light chain OS=Mus musculus OX=10090 GN=BC048507 PE=1 SV=1; Dynein light chain OS=Mus musculus OX=10090 GN=Dynll1 PE=2 SV=1; Dynein light chain 1, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll1 PE=1 SV=1" 1 4 4 0.5323 0 1 1 1 396.51202 1583.02627 1583.02477 0.94 0.00037 0/0 0 0 15461903 HCD 30 MS2 32.8629 978.5 100.734 76.9791 23764 23764 23754 QEplus033719.raw F4 1044.5 945.7 1116.7 688.5 1076.2 999.6 117 3.25 1 FALSE 1.14E-05 0.0002791 0.771 -250 119870 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DVEQQFK [K].dVEQQFk.[Y] N-Term(TMT6plex); K7(TMT6plex) 3 Q3ULG5 DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1 Q3ULG5; Q3UC10; P97311 DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1; DNA helicase OS=Mus musculus OX=10090 GN=Mcm6 PE=2 SV=1; DNA replication licensing factor MCM6 OS=Mus musculus OX=10090 GN=Mcm6 PE=1 SV=1 0 2 2 0.4178 0 1 1 1 676.38464 1351.76201 1351.76219 -0.13 -0.00009 0/0 0 0 11134679 HCD 30 MS2 60.25114 1156.8 73.769 76.9864 23766 23766 23765 QEplus033719.raw F4 1290.1 1088.3 1169.8 917.6 1403.9 1071.3 374 2.13 1 FALSE 0.00165 0.02693 0.233 -250 119877 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WGETPLHTACR [K].wGETPLHTAcR.[H] N-Term(TMT6plex); C10(Carbamidomethyl) 2 B7ZP20 Ankyrin repeat and FYVE domain containing 1 OS=Mus musculus OX=10090 GN=Ankfy1 PE=2 SV=1 B7ZP20; Q810B6 Ankyrin repeat and FYVE domain containing 1 OS=Mus musculus OX=10090 GN=Ankfy1 PE=2 SV=1; Rabankyrin-5 OS=Mus musculus OX=10090 GN=Ankfy1 PE=1 SV=2 0 3 3 0.5862 0 1 1 1 519.60211 1556.79178 1556.78411 4.93 0.00256 0/0 0 0 3518634.75 HCD 30 MS2 72.98303 773.1 110 76.9889 23767 23767 23765 QEplus033719.raw F4 771.5 661.9 764.2 683.8 938.4 818.5 195 3.77 1 FALSE 1.14E-05 9.56E-05 0.861 -250 119885 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERFAGVDIR [K].eRFAGVDIR.[V] N-Term(TMT6plex) 3 Q641N3 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 Q641N3; P14131; Q5CZY9 Rps16 protein (Fragment) OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1; 40S ribosomal protein S16 OS=Mus musculus OX=10090 GN=Rps16 PE=1 SV=4; Rps16 protein OS=Mus musculus OX=10090 GN=Rps16 PE=2 SV=1 1 3 3 0.3768 0 1 1 1 431.24908 1291.7327 1291.732 0.54 0.00023 0/0 0 0 21686830 HCD 30 MS2 41.39713 714.9 63.928 76.9912 23768 23768 23765 QEplus033719.raw F4 754.7 545.1 774.4 559.9 788.9 866.5 496 2.76 1 FALSE 0.0003211 0.006295 0.472 -250 119896 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVTIMPK [K].rVTIMPk.[D] N-Term(TMT6plex); K7(TMT6plex) 8 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 1 3 3 0.4476 0 1 1 1 434.9494 1302.83365 1302.83318 0.36 0.00016 0/0 0 0 19627658 HCD 30 MS2 3.593582 561 59.653 76.9957 23770 23770 23765 QEplus033719.raw F4 523.8 549.3 577.1 387.2 793.6 534.8 282 2.86 2 FALSE 0.001177 0.01578 0.323 -250 119903 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYEEIAK [K].nYEEIAk.[V] N-Term(TMT6plex); K7(TMT6plex) 3 Q9D1D4 Transmembrane emp24 domain-containing protein 10 OS=Mus musculus OX=10090 GN=Tmed10 PE=1 SV=1 Q9D1D4; A0A1Y7VM54; Q9D1D4-2 Transmembrane emp24 domain-containing protein 10 OS=Mus musculus OX=10090 GN=Tmed10 PE=1 SV=1; Transmembrane emp24 domain-containing protein 10 OS=Mus musculus OX=10090 GN=Tmed10 PE=1 SV=1; Isoform 2 of Transmembrane emp24 domain-containing protein 10 OS=Mus musculus OX=10090 GN=Tmed10 0 2 2 0.4216 0 1 1 1 662.87671 1324.74614 1324.75129 -3.88 -0.00257 0/0 0 0 19445508 HCD 30 MS2 18.56923 1408.3 89.326 76.998 23771 23771 23765 QEplus033719.raw F4 1463.5 904.2 1444.5 1805.1 1115.1 1717.5 331 2.87 1 FALSE 0.0007533 0.01061 0.395 -250 119915 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIPENGPAAQDPHK [R].vIPENGPAAQDPHk.[V] N-Term(TMT6plex); K14(TMT6plex) 6 Q60597 "2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh PE=1 SV=3" Q60597-4; Q60597-3; Q60597-2; Q60597; Q6P8I7; Z4YJV4 "Isoform 4 of 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh; Isoform 3 of 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh; Isoform 2 of 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh; 2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ogdh PE=1 SV=3; Oxoglutarate dehydrogenase (succinyl-transferring) OS=Mus musculus OX=10090 GN=Ogdh PE=2 SV=1; Oxoglutarate dehydrogenase (succinyl-transferring) OS=Mus musculus OX=10090 GN=Ogdh PE=1 SV=1" 0 3 3 0.7563 0 1 1 1 644.36456 1931.07914 1931.07508 2.1 0.00135 0/0 0 0 8457913 HCD 30 MS2 23.11901 454.6 110 77.003 23773 23773 23765 QEplus033719.raw F4 583.9 318.3 443.6 431.7 467.2 482.6 418 5.99 1 FALSE 1.14E-05 1.14E-11 2.176 -250 119933 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HTLNQIDSVK [K].hTLNQIDSVk.[V] N-Term(TMT6plex); K10(TMT6plex) 1 P12763 SWISS-PROT:P12763 (Bos taurus) Alpha-2-HS-glycoprotein precursor P12763 SWISS-PROT:P12763 (Bos taurus) Alpha-2-HS-glycoprotein precursor 0 4 4 0.642 0 1 1 1 403.99188 1612.9457 1612.94228 2.12 0.00086 0/0 0 0 7060069 HCD 30 MS2 13.01359 495.6 110 77.0079 23775 23775 23765 QEplus033719.raw F4 513.4 212.6 272.3 167.2 1457.4 350.9 372 4.05 1 TRUE 1.14E-05 2.72E-05 0.965 -250 119949 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSMPASSFQQQK [R].nSMPASSFQQQk.[L] N-Term(TMT6plex); K12(TMT6plex) 14 Q3TV90; Q3UZ17 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Luc7l PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1 E9Q715; Q3TV90; Q05CX5; Q9CYI4; Q7TNC4-2; D3Z765; Q9CYI4-2; Q3U5L2; Q7TNC4-3; Q3UZ17; Q7TNC4; Q3UGK2; A0A0R4J047; Q05D11 Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Luc7l PE=2 SV=1; Luc7l2 protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=1 SV=1; Putative RNA-binding protein Luc7-like 1 OS=Mus musculus OX=10090 GN=Luc7l PE=1 SV=2; Isoform 2 of Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2; Putative RNA-binding protein Luc7-like 1 (Fragment) OS=Mus musculus OX=10090 GN=Luc7l PE=1 SV=1; Isoform 2 of Putative RNA-binding protein Luc7-like 1 OS=Mus musculus OX=10090 GN=Luc7l; Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1; Isoform 3 of Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1; Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1; Putative RNA-binding protein Luc7-like 1 OS=Mus musculus OX=10090 GN=Luc7l PE=1 SV=1; Luc7l protein (Fragment) OS=Mus musculus OX=10090 GN=Luc7l PE=2 SV=1 0 2 2 0.7609 0 1 1 1 905.98138 1810.95549 1810.95219 1.82 0.00165 0/0 0 0 6002660 HCD 30 MS2 15.83791 354 110 77.0178 23778 23778 23776 QEplus033719.raw F4 341.2 335.5 401.8 291.2 391.4 363 344 4.6 2 FALSE 1.14E-05 1.16E-11 2.175 -250 119957 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSGTAEVELK [K].gSGTAEVELk.[K] N-Term(TMT6plex); K10(TMT6plex) 7 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480; A0A1L1SU37; A0A1L1SSN6; A0A1L1SUV0; A0A1L1SQV8; P52480-2; A0A1L1STV8 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1 0 2 2 0.5185 0 1 1 1 724.92255 1448.83782 1448.83608 1.2 0.00087 0/0 0 0 31484148 HCD 30 MS2 30.00277 769.5 47.609 77.0223 23780 23780 23776 QEplus033719.raw F4 830.3 696.8 844.5 649.6 869.4 726.7 465 3.24 2 FALSE 1.14E-05 1.66E-07 1.385 -250 119964 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLDAIPDNHK [R].sLDAIPDNHk.[F] N-Term(TMT6plex); K10(TMT6plex) 1 P47757 F-actin-capping protein subunit beta OS=Mus musculus OX=10090 GN=Capzb PE=1 SV=3 P47757 F-actin-capping protein subunit beta OS=Mus musculus OX=10090 GN=Capzb PE=1 SV=3 0 3 3 0.5589 0 1 1 1 523.30176 1567.89072 1567.88443 4.01 0.0021 0/0 0 0 24051854 HCD 30 MS2 51.02523 825.1 32.426 77.0246 23781 23781 23776 QEplus033719.raw F4 761.8 627.9 941.8 852.2 756.1 1010.8 390 3.31 1 FALSE 1.14E-05 3.71E-05 0.939 -250 119971 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QAVDVSPLR [R].qAVDVSPLR.[R] N-Term(TMT6plex) 4 Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 P97461; D3Z1S8; D3YYM6; Q91V55 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=3; 40S ribosomal protein S5 (Fragment) OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1; 40S ribosomal protein S5 (Fragment) OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1; 40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=1 0 2 2 0.5015 0 1 1 1 607.35883 1213.71037 1213.7102 0.14 0.00009 0/0 0 0 23146560 HCD 30 MS2 22.78873 924.8 66.502 77.0268 23782 23782 23776 QEplus033719.raw F4 910.9 747.9 1055.1 754.7 997.3 1083.1 291 3.37 1 FALSE 1.14E-05 3.53E-06 1.133 -250 119977 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLEELEEK [K].hLEELEEk.[S] N-Term(TMT6plex); K8(TMT6plex) 4 P97379 Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2 PE=1 SV=2 P97379; P97379-2; Q3U931; Q3U6B1 Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2 PE=1 SV=2; Isoform B of Ras GTPase-activating protein-binding protein 2 OS=Mus musculus OX=10090 GN=G3bp2; Uncharacterized protein OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=G3bp2 PE=2 SV=1 0 3 3 0.5526 0 1 1 1 495.61731 1484.83738 1484.83608 0.87 0.00043 0/0 0 0 22012418 HCD 30 MS2 27.79531 1090.8 110 77.0293 23783 23783 23776 QEplus033719.raw F4 1130.6 906.7 1176.4 849.2 1325.3 1156.8 367 3.71 1 FALSE 1.14E-05 4.46E-06 1.114 -250 119991 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSMPASSFQQQK [R].nSMPASSFQQQk.[L] N-Term(TMT6plex); K12(TMT6plex) 14 Q3TV90; Q3UZ17 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Luc7l PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1 E9Q715; Q3TV90; Q05CX5; Q9CYI4; Q7TNC4-2; D3Z765; Q9CYI4-2; Q3U5L2; Q7TNC4-3; Q3UZ17; Q7TNC4; Q3UGK2; A0A0R4J047; Q05D11 Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Luc7l PE=2 SV=1; Luc7l2 protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=1 SV=1; Putative RNA-binding protein Luc7-like 1 OS=Mus musculus OX=10090 GN=Luc7l PE=1 SV=2; Isoform 2 of Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2; Putative RNA-binding protein Luc7-like 1 (Fragment) OS=Mus musculus OX=10090 GN=Luc7l PE=1 SV=1; Isoform 2 of Putative RNA-binding protein Luc7-like 1 OS=Mus musculus OX=10090 GN=Luc7l; Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1; Isoform 3 of Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1; Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1; Putative RNA-binding protein Luc7-like 1 OS=Mus musculus OX=10090 GN=Luc7l PE=1 SV=1; Luc7l protein (Fragment) OS=Mus musculus OX=10090 GN=Luc7l PE=2 SV=1 0 3 3 0.7587 0 1 1 1 604.323 1810.95444 1810.95219 1.24 0.00075 0/0 0 0 18746724 HCD 30 MS2 8.277366 733.7 110 77.0341 23785 23785 23776 QEplus033719.raw F4 710.4 709.1 776.7 617.6 812.4 776 346 4.89 2 FALSE 1.14E-05 2.75E-08 1.534 -250 119997 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESYSALMR [K].eSYSALMR.[E] N-Term(TMT6plex) 26 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q499F9; Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q05CR3; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; A0A0R4J218; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.6532 0 1 1 1 593.3111 1185.61492 1185.61352 1.17 0.0007 0/0 0 0 16393024 HCD 30 MS2 36.87879 1154 77.279 77.0364 23786 23786 23776 QEplus033719.raw F4 1168.1 1065.7 1225.6 1003.5 1321.4 1140 136 2.97 2 FALSE 1.14E-05 0.0001993 0.8 -250 120003 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASRGDDEDISTEFGHK [R].aSRGDDEDISTEFGHk.[A] N-Term(TMT6plex); K16(TMT6plex) 4 Q9QZV4 Histidine-rich Ca2+ binding protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1 Q9QZV4; Q9WVE4; G5E8J6; B9EIW1 Histidine-rich Ca2+ binding protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1; Histidine-rich calcium-binding protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1; Histidine-rich calcium-binding protein OS=Mus musculus OX=10090 GN=Hrc PE=1 SV=1; Hrc protein OS=Mus musculus OX=10090 GN=Hrc PE=2 SV=1 1 4 4 0.7262 0 1 1 1 556.28302 2222.11025 2222.10896 0.58 0.00032 0/0 0 0 8587362 HCD 30 MS2 20.78751 586.1 110 77.0437 23788 23788 23787 QEplus033719.raw F4 727.3 385.1 552.1 709.7 584.6 557.8 231 5.88 1 FALSE 1.14E-05 3.16E-12 2.282 -250 120013 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CQYLQAEK [R].cQYLQAEk.[K] N-Term(TMT6plex); C1(Carbamidomethyl); K8(TMT6plex) 3 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 A2VCK0; Q8VDD5; A0A2R8VKI5 Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-9 (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=1 0 3 3 0.5303 0 1 1 1 499.94348 1497.81589 1497.81357 1.55 0.00077 0/0 0 0 68745176 HCD 30 MS2 15.66388 796.8 25.105 77.0484 23790 23790 23787 QEplus033719.raw F4 819.5 704 937.9 602.9 892 824.2 338 3.47 1 FALSE 0.0002719 0.005444 0.491 -250 120021 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HELQANCYEEVK [K].hELQANcYEEVk.[D] N-Term(TMT6plex); C7(Carbamidomethyl); K12(TMT6plex) 2 P18760 Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3 P18760; F8WGL3 "Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1" 0 3 3 0.7677 0 1 1 1 660.00861 1978.01126 1978.01043 0.42 0.00028 0/0 0 0 33223376 HCD 30 MS2 38.85342 602.5 24.341 77.0507 23791 23791 23787 QEplus033719.raw F4 689.3 386.7 624.3 753.2 472 689.5 294 5.64 1 FALSE 1.14E-05 1.77E-09 1.76 -250 120027 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FAIHGDPK [K].fAIHGDPk.[A] N-Term(TMT6plex); K8(TMT6plex) 1 Q9CRB6 Tubulin polymerization-promoting protein family member 3 OS=Mus musculus OX=10090 GN=Tppp3 PE=1 SV=1 Q9CRB6 Tubulin polymerization-promoting protein family member 3 OS=Mus musculus OX=10090 GN=Tppp3 PE=1 SV=1 0 3 3 0.4455 0 1 1 1 448.26779 1342.78882 1342.78834 0.36 0.00016 0/0 0 0 26009684 HCD 30 MS2 43.24373 805.2 48.091 77.0529 23792 23792 23787 QEplus033719.raw F4 819.2 654.3 856 576.6 1033.5 891.8 380 3.03 1 FALSE 1.14E-05 0.0002064 0.797 -250 120033 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIAAHIKK [K].dIAAHIkk.[E] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 3 Q9D6F6 Dynein light chain OS=Mus musculus OX=10090 GN=Dynll1 PE=2 SV=1 Q80ZS7; Q9D6F6; P63168 "Dynein light chain OS=Mus musculus OX=10090 GN=BC048507 PE=1 SV=1; Dynein light chain OS=Mus musculus OX=10090 GN=Dynll1 PE=2 SV=1; Dynein light chain 1, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll1 PE=1 SV=1" 1 3 3 0.4163 0 1 1 1 528.34735 1583.0275 1583.02477 1.72 0.00091 0/0 0 0 18098698 HCD 30 MS2 26.47794 1571 95.356 77.0552 23793 23793 23787 QEplus033719.raw F4 2153.7 1233.3 1483.5 1085.9 2059 1410.5 112 2.33 1 FALSE 1.14E-05 0.0004904 0.724 -250 120038 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVPLNASK [K].aVPLNASk.[Q] N-Term(TMT6plex); K8(TMT6plex) 2 Q9WV55 Vesicle-associated membrane protein-associated protein A OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=2 Q9WV55; A0A3B2W837 Vesicle-associated membrane protein-associated protein A OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=2; Vesicle-associated membrane protein-associated protein A (Fragment) OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=1 0 2 2 0.5035 0 1 1 1 629.40045 1257.79363 1257.79309 0.42 0.00027 0/0 0 0 15582971 HCD 30 MS2 29.15198 926.2 110 77.0577 23794 23794 23787 QEplus033719.raw F4 994.2 779.8 1016.1 822.6 937.3 1007.2 254 2.84 1 FALSE 1.14E-05 0.0001837 0.806 -250 120048 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQVEYK [K].vQVEYk.[G] N-Term(TMT6plex); K6(TMT6plex) 17 Q3TEK2; B7U582 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1;Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; D3Z5E2; Q3TH56; B7U582; Q3TZJ3; P63017; Q3TQ13; Q3TB63; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16; P17156 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Mus musculus OX=10090 GN=Hspa2 PE=1 SV=2 0 3 3 0.2797 0 1 1 1 408.58524 1223.74115 1223.73999 0.95 0.00039 0/0 0 0 12038297 HCD 30 MS2 33.82053 1008 84.154 77.06 23795 23795 23787 QEplus033719.raw F4 1600.9 612.6 1052.7 826 712.7 1242.8 326 2.61 2 FALSE 0.008136 0.1377 -0.071 -250 120057 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HFELGGDKK [K].hFELGGDkk.[R] N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex) 2 Q5M9P1 Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1 A0A2I3BPG9; Q5M9P1 "Ribosomal protein L36A, pseudogene 1 OS=Mus musculus OX=10090 GN=Rpl36a-ps1 PE=3 SV=1; Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1" 1 4 4 0.4817 0 1 1 1 430.26077 1718.02126 1718.02042 0.49 0.00021 0/0 0 0 51853156 HCD 30 MS2 21.96715 855.7 29.902 77.0622 23796 23796 23787 QEplus033719.raw F4 896.5 752 1024.8 714.8 790.7 955.4 395 3.01 1 FALSE 1.14E-05 0.0002475 0.782 -250 120066 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NASDMIDK [K].nASDMIDk.[L] N-Term(TMT6plex); K8(TMT6plex) 5 Q8C2Q8; A2AKU9 ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1;ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1 Q9ERA8; Q8C2Q8; Q9D9D7; Q3UD06; A2AKU9 ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=2 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=2 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1 0 2 2 0.3011 0 1 1 1 676.36902 1351.73076 1351.72917 1.18 0.00079 0/0 0 0 23899812 HCD 30 MS2 31.19857 1249.9 56.451 77.0645 23797 23797 23787 QEplus033719.raw F4 1435.5 1042.3 1331.9 1205.1 1222.3 1262.3 310 2.79 2 FALSE 1.14E-05 0.0002779 0.772 -250 120074 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLQLAIR [R].hLQLAIR.[NG] N-Term(TMT6plex) 17 Q149V4; Q8BFU2; Q3THW5; P27661 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1;Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3;Histone H2A.V OS=Mus musculus OX=10090 GN=H2az2 PE=1 SV=3;Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 Q149V4; Q8BFU2; Q3THW5; C0HKE5; P0C0S6; Q8CGP5; A0AUV1; Q8CGP4; Q3TFU6; Q8R1M2; Q8R029; P27661; A0A0N4SV66; Q64426; Q8CGP7; Q8CGP6; Q6GSS7 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1; Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3; Histone H2A.V OS=Mus musculus OX=10090 GN=H2az2 PE=1 SV=3; Histone H2A type 1-G OS=Mus musculus OX=10090 GN=H2ac11 PE=1 SV=1; Histone H2A.Z OS=Mus musculus OX=10090 GN=H2az1 PE=1 SV=2; Histone H2A type 1-F OS=Mus musculus OX=10090 GN=Hist1h2af PE=1 SV=3; Histone H2A (Fragment) OS=Mus musculus OX=10090 GN=H2ac12 PE=2 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2ac1 PE=1 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2az1 PE=2 SV=1; Histone H2A.J OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2az2 PE=2 SV=1; Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2; Histone H2A OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A (Fragment) OS=Mus musculus domesticus OX=10092 GN=H2A PE=2 SV=1; Histone H2A type 1-K OS=Mus musculus OX=10090 GN=H2ac15 PE=1 SV=3; Histone H2A type 1-H OS=Mus musculus OX=10090 GN=H2ac12 PE=1 SV=3; Histone H2A type 2-A OS=Mus musculus OX=10090 GN=Hist2h2aa1 PE=1 SV=3 0 3 3 0.1793 0 1 1 1 360.56787 1079.68906 1079.68868 0.35 0.00013 0/0 0 0 14129601 HCD 30 MS2 4.246819 148.1 60.484 77.0718 23799 23799 23798 QEplus033719.raw F4 143.5 144.2 187.3 91.8 175.8 145.7 16 3.29 4 FALSE 4.43E-05 0.001445 0.629 -250 120079 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VADISGDTQK [R].vADISGDTQk.[A] N-Term(TMT6plex); K10(TMT6plex) 5 Q78PY7 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 Q78PY7; Q3UZI3; Q3TW51; Q3TRW3; Q3TJ56 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 0 2 2 0.6583 0 1 1 1 746.42462 1491.84197 1491.84189 0.05 0.00004 0/0 0 0 20049916 HCD 30 MS2 14.79698 682.1 73.372 77.0741 23800 23800 23798 QEplus033719.raw F4 730.6 669.6 763.1 513.1 712.1 704.4 431 3.6 1 FALSE 1.14E-05 4.11E-08 1.501 -250 120087 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DMLGPK [K].dMLGPk.[-] N-Term(TMT6plex); K6(TMT6plex) 3 P97807 "Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh PE=1 SV=3" H3BKG7; P97807; P97807-2 "Fumarate hydratase 1 (Fragment) OS=Mus musculus OX=10090 GN=Fh1 PE=1 SV=1; Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh PE=1 SV=3; Isoform Cytoplasmic of Fumarate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Fh" 0 2 2 0.2743 0 1 1 1 559.83612 1118.66496 1118.66439 0.52 0.00029 0/0 0 0 44683076 HCD 30 MS2 28.69723 760.7 17.899 77.0763 23801 23801 23798 QEplus033719.raw F4 753 543.2 706.8 908.4 720.7 931.8 220 2.37 1 FALSE 0.004228 0.07768 0.068 -250 120094 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LPTISQR [K].lPTISQR.[I] N-Term(TMT6plex) 2 Q9DCC8 Mitochondrial import receptor subunit TOM20 homolog OS=Mus musculus OX=10090 GN=Tomm20 PE=1 SV=1 Q9DCC8; A0A1D5RLZ6 Mitochondrial import receptor subunit TOM20 homolog OS=Mus musculus OX=10090 GN=Tomm20 PE=1 SV=1; Mitochondrial import receptor subunit TOM20 homolog OS=Mus musculus OX=10090 GN=Tomm20 PE=1 SV=1 0 2 2 0.2565 0 1 1 1 522.32483 1043.64238 1043.64106 1.27 0.00066 0/0 0 0 27827044 HCD 30 MS2 33.00899 787.4 35.215 77.0786 23802 23802 23798 QEplus033719.raw F4 726 711.3 912.3 665.5 855.5 853.7 300 1.91 1 FALSE 0.0002719 0.005411 0.492 -250 120103 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FSTPEQAAK [R].fSTPEQAAk.[N] N-Term(TMT6plex); K9(TMT6plex) 4 G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 Q8R081; G3UY38; Q3UMT7; G5E924 Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 0 2 2 0.5437 0 1 1 1 718.91138 1436.81548 1436.81495 0.37 0.00026 0/0 0 0 9399037 HCD 30 MS2 15.22255 616.6 110 77.0811 23803 23803 23798 QEplus033719.raw F4 648 590.3 705.4 453.8 694.4 607.8 461 3.09 1 FALSE 5.44E-05 0.002008 0.598 -250 120112 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IGALTHK [R].iGALTHk.[V] N-Term(TMT6plex); K7(TMT6plex) 8 Q99KB8 "Hydroxyacylglutathione hydrolase, mitochondrial OS=Mus musculus OX=10090 GN=Hagh PE=1 SV=2" Q99KB8; Q99KB8-2; E9Q2H8; D3YUX8; E9PYA3; A0A0R4J052; G5E8T9; D3YWI0 "Hydroxyacylglutathione hydrolase, mitochondrial OS=Mus musculus OX=10090 GN=Hagh PE=1 SV=2; Isoform 2 of Hydroxyacylglutathione hydrolase, mitochondrial OS=Mus musculus OX=10090 GN=Hagh; Hydroxyacylglutathione hydrolase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Hagh PE=1 SV=1; Hydroxyacylglutathione hydrolase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Hagh PE=1 SV=2; Hydroxyacylglutathione hydrolase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Hagh PE=1 SV=1; Hydroxyacylglutathione hydrolase, mitochondrial OS=Mus musculus OX=10090 GN=Hagh PE=1 SV=1; Hydroxyacylglutathione hydrolase, mitochondrial OS=Mus musculus OX=10090 GN=Hagh PE=1 SV=1; Hydroxyacylglutathione hydrolase, mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Hagh PE=1 SV=1" 0 3 3 0.5539 0 1 1 1 399.92935 1197.7735 1197.77196 1.28 0.00051 0/0 0 0 9388943 HCD 30 MS2 30.10141 829.3 110 77.0836 23804 23804 23798 QEplus033719.raw F4 862.6 528.5 871.8 700.2 851.2 1161.4 108 3.43 1 FALSE 6.52E-05 0.002668 0.57 -250 120122 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLPSTYNK [K].gLPSTYNk.[D] N-Term(TMT6plex); K8(TMT6plex) 3 Q91YI0 Argininosuccinate lyase OS=Mus musculus OX=10090 GN=Asl PE=1 SV=1 Q91YI0; F7D439; Q3UUH0 Argininosuccinate lyase OS=Mus musculus OX=10090 GN=Asl PE=1 SV=1; Argininosuccinate lyase (Fragment) OS=Mus musculus OX=10090 GN=Asl PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Asl PE=2 SV=1 0 2 2 0.5288 0 1 1 1 669.39777 1337.78826 1337.78292 3.99 0.00267 0/0 0 0 8291103 HCD 30 MS2 44.92852 856.4 110 77.0861 23805 23805 23798 QEplus033719.raw F4 838.5 671.4 1006.1 821.9 799.5 1001 350 2.78 1 FALSE 0.0005076 0.007824 0.442 -250 120152 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLPFQR [R].kLPFQR.[L] N-Term(TMT6plex); K1(TMT6plex) 9 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; E0CZ27; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 1 3 3 0.1229 0 1 1 1 416.27325 1246.80521 1246.8036 1.29 0.00054 0/0 0 0 1161344256 HCD 30 MS2 5.536324 619.8 0.949 77.1009 23810 23810 23809 QEplus033719.raw F4 526.8 685.7 714.1 366.4 919.2 506.8 215 2.36 2 FALSE 0.007252 0.1157 -0.033 -250 120169 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTSISCYK [K].dTSIScYk.[S] N-Term(TMT6plex); C6(Carbamidomethyl); K8(TMT6plex) 1 Q3TLE2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fermt2 PE=1 SV=1 Q3TLE2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fermt2 PE=1 SV=1 0 2 2 0.6579 0 1 1 1 716.38147 1431.75566 1431.75539 0.19 0.00014 0/0 0 0 10242878 HCD 30 MS2 0 727.4 110 77.1057 23812 23812 23809 QEplus033719.raw F4 742.6 674.8 817.6 599.9 810.6 718.7 261 3.42 1 FALSE 1.14E-05 0.0002008 0.799 -250 120178 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIVEAAAVR [R].nIVEAAAVR.[D] N-Term(TMT6plex) 1 Q497N1 40S ribosomal protein S26 OS=Mus musculus OX=10090 GN=Rps26 PE=1 SV=1 Q497N1 40S ribosomal protein S26 OS=Mus musculus OX=10090 GN=Rps26 PE=1 SV=1 0 2 2 0.4188 0 1 1 1 586.35468 1171.70207 1171.69964 2.08 0.00122 0/0 0 0 7789229.5 HCD 30 MS2 37.68902 927.1 110 77.1082 23813 23813 23809 QEplus033719.raw F4 987.7 719 940.2 773.6 1147.5 994.4 253 3.2 1 FALSE 1.14E-05 2.19E-05 0.983 -250 120187 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAMDNSEIAGEK [K].tAMDNSEIAGEk.[K] N-Term(TMT6plex); K12(TMT6plex) 13 Q8CAQ8; A0A0U1RP81 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1;MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q3U7N2; Q8CAQ8; E9QAY6; Q8CAQ8-2; Q3TZK4; A0A0U1RP81; Q3TVZ5; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5; A0A1B0GX08 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 0 2 2 0.7759 0 1 1 1 862.44916 1723.89104 1723.89367 -1.53 -0.00132 0/0 0 0 3931863 HCD 30 MS2 0 452.7 110 77.1107 23814 23814 23809 QEplus033719.raw F4 468.4 336.1 490.3 471.5 402.6 547.5 266 5.4 2 FALSE 1.14E-05 2.45E-12 2.303 -250 120199 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQEGEIFDTEK [R].hQEGEIFDTEk.[E] N-Term(TMT6plex); K11(TMT6plex) 1 P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 0 3 3 0.7613 0 1 1 1 597.64941 1790.93369 1790.9325 0.66 0.0004 0/0 0 0 163412144 HCD 30 MS2 2.413507 560.8 8.597 77.1155 23816 23816 23809 QEplus033719.raw F4 512.6 427 645.7 537.8 573.2 668.5 268 4.65 1 FALSE 1.14E-05 1.22E-06 1.221 -250 120221 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FGVQMDR [K].fGVQMDR.[V] N-Term(TMT6plex) 3 Q60598 Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2 Q8BNA5; Q60598; Q921L6 SH3 domain-containing protein OS=Mus musculus OX=10090 GN=Cttn PE=2 SV=1; Src substrate cortactin OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=2; Cttn protein OS=Mus musculus OX=10090 GN=Cttn PE=1 SV=1 0 2 2 0.5632 0 1 1 1 541.28705 1081.56682 1081.56618 0.59 0.00032 0/0 0 0 17118944 HCD 30 MS2 37.22453 1411.5 106.59 77.1224 23819 23819 23809 QEplus033719.raw F4 1459.5 1188.7 1487.1 1120.1 1701.8 1511.8 118 2.77 1 FALSE 0.0002218 0.00455 0.512 -250 120245 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGEMTLK [K].eGEMTLk.[S] N-Term(TMT6plex); K7(TMT6plex) 4 Q9R1P0 Proteasome subunit alpha type-4 OS=Mus musculus OX=10090 GN=Psma4 PE=1 SV=1 Q3TL95; Q9R1P0; Q3UCF0; E9PW69 Proteasome subunit alpha type (Fragment) OS=Mus musculus OX=10090 GN=Psma4 PE=2 SV=1; Proteasome subunit alpha type-4 OS=Mus musculus OX=10090 GN=Psma4 PE=1 SV=1; Proteasome subunit alpha type OS=Mus musculus OX=10090 GN=Psma4 PE=2 SV=1; Proteasome subunit alpha type (Fragment) OS=Mus musculus OX=10090 GN=Psma4 PE=1 SV=1 0 2 2 0.2574 0 1 1 1 633.36267 1265.71807 1265.71754 0.41 0.00026 0/0 0 0 32757956 HCD 30 MS2 55.75838 1219.1 48.39 77.1345 23823 23823 23820 QEplus033719.raw F4 1361.6 957 1275 890.2 1385.2 1445.7 426 2.72 1 FALSE 0.0003408 0.006513 0.468 -250 120250 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEALDANSR [R].lEALDANSR.[K] N-Term(TMT6plex) 7 Q6PFA2 Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1 Q6PFA2; O08585; B1AWD9; B1AWD8; B1AWE0; Q3THU7; B1AWE1 Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain A OS=Mus musculus OX=10090 GN=Clta PE=1 SV=2; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=2 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Clta PE=1 SV=1 0 2 2 0.5161 0 1 1 1 609.33807 1217.66887 1217.66873 0.11 0.00007 0/0 0 0 29724714 HCD 30 MS2 24.39067 751.6 44.227 77.1368 23824 23824 23820 QEplus033719.raw F4 752.7 707.8 854.6 577.5 852.6 764.7 326 3.1 1 FALSE 1.14E-05 9.67E-06 1.05 -250 120260 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HFELGGDK [K].hFELGGDk.[K] N-Term(TMT6plex); K8(TMT6plex) 2 Q5M9P1 Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1 A0A2I3BPG9; Q5M9P1 "Ribosomal protein L36A, pseudogene 1 OS=Mus musculus OX=10090 GN=Rpl36a-ps1 PE=3 SV=1; Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1" 0 3 3 0.5691 0 1 1 1 454.25912 1360.76282 1360.76252 0.22 0.0001 0/0 0 0 25801520 HCD 30 MS2 25.17439 626.4 43.805 77.1391 23825 23825 23820 QEplus033719.raw F4 639.2 536.9 682.8 474.4 684.3 740.6 392 3.62 1 FALSE 1.14E-05 2.66E-06 1.157 -250 120264 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NASDMIDK [K].nASDMIDk.[L] N-Term(TMT6plex); K8(TMT6plex) 5 Q8C2Q8; A2AKU9 ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1;ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1 Q9ERA8; Q8C2Q8; Q9D9D7; Q3UD06; A2AKU9 ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=2 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=2 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1; ATP synthase subunit gamma OS=Mus musculus OX=10090 GN=Atp5c1 PE=1 SV=1 0 3 3 0.3989 0 1 1 1 451.24747 1351.72785 1351.72917 -0.98 -0.00044 0/0 0 0 22030886 HCD 30 MS2 19.16978 758.4 58.068 77.1413 23826 23826 23820 QEplus033719.raw F4 842.2 576.5 775.5 716.7 786.1 853.3 300 1.83 2 FALSE 0.009806 0.1907 -0.126 -250 120272 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HELQANCYEEVK [K].hELQANcYEEVk.[D] N-Term(TMT6plex); C7(Carbamidomethyl); K12(TMT6plex) 2 P18760 Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3 P18760; F8WGL3 "Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1" 0 4 4 0.6659 0 1 1 1 495.25815 1978.01076 1978.01043 0.17 0.00008 0/0 0 0 20363096 HCD 30 MS2 27.83344 790 71.883 77.1436 23827 23827 23820 QEplus033719.raw F4 803.7 702.1 935.5 543 954.1 801.4 293 4.61 1 FALSE 1.14E-05 1.40E-06 1.21 -250 120291 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REEMVLDDSAK [K].rEEMVLDDSAk.[F] N-Term(TMT6plex); K11(TMT6plex) 1 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 Q8R429 Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus OX=10090 GN=Atp2a1 PE=1 SV=1 1 3 3 0.5664 0 1 1 1 584.31897 1750.94236 1750.94096 0.8 0.00047 0/0 0 0 9319148 HCD 30 MS2 17.26808 1101.1 108.921 77.1485 23829 23829 23820 QEplus033719.raw F4 1146.5 631.4 976.9 1441.3 850.1 1560.5 377 5.72 1 FALSE 1.14E-05 4.49E-12 2.253 -250 120297 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HELQANCYEEVK [K].hELQANcYEEVk.[D] N-Term(TMT6plex); C7(Carbamidomethyl); K12(TMT6plex) 2 P18760 Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3 P18760; F8WGL3 "Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1" 0 2 2 0.6804 0 1 1 1 989.50763 1978.00798 1978.01043 -1.24 -0.00123 0/0 0 0 6011599 HCD 30 MS2 0 528.8 110 77.1511 23830 23830 23820 QEplus033719.raw F4 568.6 506.1 643.4 317.8 655 481.7 294 6.07 1 FALSE 1.14E-05 3.02E-12 2.286 -250 120304 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVAGNPMVK [K].gVAGNPMVk.[S] N-Term(TMT6plex); K9(TMT6plex) 1 Q3UPH1 Protein PRRC1 OS=Mus musculus OX=10090 GN=Prrc1 PE=1 SV=1 Q3UPH1 Protein PRRC1 OS=Mus musculus OX=10090 GN=Prrc1 PE=1 SV=1 0 2 2 0.5145 0 1 1 1 665.90033 1330.79338 1330.79171 1.25 0.00083 0/0 0 0 6979688 HCD 30 MS2 27.70187 678.2 110 77.1584 23832 23832 23831 QEplus033719.raw F4 705.9 588.8 746.7 547.7 774.1 706.1 393 3.44 1 FALSE 1.14E-05 4.16E-05 0.93 -250 120309 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLMESPANEMTPTR [R].hLMESPANEMTPTR.[F] N-Term(TMT6plex) 3 Q9CPY7 Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 PE=1 SV=3 Q9CPY7; A0A0G2JEM7; Q9CPY7-2 Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 PE=1 SV=3; Cytosol aminopeptidase (Fragment) OS=Mus musculus OX=10090 GN=Lap3 PE=1 SV=1; Isoform 2 of Cytosol aminopeptidase OS=Mus musculus OX=10090 GN=Lap3 0 3 3 0.7283 0 1 1 1 614.97272 1842.9036 1842.90397 -0.2 -0.00012 0/0 0 0 10875990 HCD 30 MS2 21.05233 570.9 110 77.1609 23833 23833 23831 QEplus033719.raw F4 572.6 479.7 590.8 438.4 749 594.9 151 6.11 1 FALSE 1.14E-05 9.91E-13 2.378 -250 120316 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous INQQLDTK [R].iNQQLDTk.[QL] N-Term(TMT6plex); K8(TMT6plex) 11 Q5SX40; P13541; Q5SX39; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; Q5DTH2; Q3UUB1; Q8BLW0; I6L963; B1AR69; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; MKIAA4211 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.5445 0 1 1 1 709.42426 1417.84123 1417.8415 -0.19 -0.00013 0/0 0 0 12753785 HCD 30 MS2 8.998399 838.1 110 77.1634 23834 23834 23831 QEplus033719.raw F4 1096.3 192.9 627 1576.4 266.3 1269.9 524 2.92 4 FALSE 1.14E-05 0.0001459 0.826 -250 120323 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APVLSDSSCK [K].aPVLSDSSck.[S] N-Term(TMT6plex); C9(Carbamidomethyl); K10(TMT6plex) 1 P00761 SWISS-PROT:P00761 Trypsin - Sus scrofa (Pig). P00761 SWISS-PROT:P00761 Trypsin - Sus scrofa (Pig). 0 2 2 0.5075 0 1 1 1 761.42242 1521.83757 1521.8347 1.89 0.00144 0/0 0 0 4431479 HCD 30 MS2 29.6297 438.5 110 77.166 23835 23835 23831 QEplus033719.raw F4 470.4 371.9 496.5 372.1 432.9 487.2 419 3.35 1 TRUE 1.14E-05 3.65E-08 1.51 -250 120331 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FSTPEQAAK [R].fSTPEQAAk.[N] N-Term(TMT6plex); K9(TMT6plex) 4 G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 Q8R081; G3UY38; Q3UMT7; G5E924 Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 0 3 3 0.5017 0 1 1 1 479.60995 1436.81531 1436.81495 0.25 0.00012 0/0 0 0 10948146 HCD 30 MS2 26.06947 802.9 110 77.1685 23836 23836 23831 QEplus033719.raw F4 871.2 662.8 874.4 626.5 869.2 913.4 447 3.01 1 FALSE 0.001142 0.01524 0.33 -250 120346 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAESVEK [K].lAESVEk.[A] N-Term(TMT6plex); K7(TMT6plex) 2 G3X956 FACT complex subunit OS=Mus musculus OX=10090 GN=Supt16 PE=1 SV=1 G3X956; Q920B9 FACT complex subunit OS=Mus musculus OX=10090 GN=Supt16 PE=1 SV=1; FACT complex subunit SPT16 OS=Mus musculus OX=10090 GN=Supt16h PE=1 SV=2 0 2 2 0.1446 0 1 1 1 617.37781 1233.74834 1233.74547 2.32 0.00143 0/0 0 0 6630188 HCD 30 MS2 53.59854 1194.7 110 77.1735 23838 23838 23831 QEplus033719.raw F4 1284.8 1102.5 1230.9 915.9 1509.9 1124.1 428 2.42 1 FALSE 0.0001813 0.003966 0.528 -250 120362 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQDECVIALHDCNGDVNR [K].nQDEcVIALHDcNGDVNR.[A-] N-Term(TMT6plex); C5(Carbamidomethyl); C12(Carbamidomethyl) 10 Q80X50 Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1 A0A0G2JDV6; Q80X50-4; Q80X50-3; A0A0G2JGD0; Q80X50-5; A0A0H2UH17; Q8BJ53; Q80X50-2; Q80X50; A0A0G2JG47 Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Isoform 4 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Isoform 3 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Ubiquitin-associated protein 2-like (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Isoform 5 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; UBA domain-containing protein OS=Mus musculus OX=10090 GN=Ubap2l PE=2 SV=1; Isoform 2 of Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l; Ubiquitin-associated protein 2-like OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1; Ubiquitin-associated protein 2-like (Fragment) OS=Mus musculus OX=10090 GN=Ubap2l PE=1 SV=1 0 3 3 0.8225 0 1 1 1 786.69702 2358.07651 2358.07641 0.04 0.00003 0/0 0 0 4937439.5 HCD 30 MS2 0 112.5 110 77.1785 23840 23840 23831 QEplus033719.raw F4 121.8 86.2 122.1 99.6 115.4 129.7 64 6.76 1 FALSE 1.14E-05 6.31E-16 3.923 -250 120367 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NACIECSVNQNSIR [R].nAcIEcSVNQNSIR.[N] N-Term(TMT6plex); C3(Carbamidomethyl); C6(Carbamidomethyl) 4 P28658 Ataxin-10 OS=Mus musculus OX=10090 GN=Atxn10 PE=1 SV=2 P28658; Q3TCF4; Q8BWX1; Q3TKP3 Ataxin-10 OS=Mus musculus OX=10090 GN=Atxn10 PE=1 SV=2; Ataxin-10 OS=Mus musculus OX=10090 GN=Atxn10 PE=2 SV=1; Atx10homo_assoc domain-containing protein OS=Mus musculus OX=10090 GN=Atxn10 PE=2 SV=1; Ataxin-10 OS=Mus musculus OX=10090 GN=Atxn10 PE=2 SV=1 0 2 2 0.7837 0 1 1 1 947.46069 1893.91411 1893.91085 1.72 0.00163 0/0 0 0 3215075.75 HCD 30 MS2 0 227.4 110 77.1811 23841 23841 23831 QEplus033719.raw F4 225.9 197.1 272.3 176.6 257.6 234.6 125 4.67 1 FALSE 1.14E-05 1.10E-13 2.559 -250 120374 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GKEDALVTK [R].gkEDALVTk.[N] N-Term(TMT6plex); K2(TMT6plex); K9(TMT6plex) 3 Q3UJS2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fbl PE=2 SV=1 Q3UJS2; P35550; A0A140LIR6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fbl PE=2 SV=1; rRNA 2'-O-methyltransferase fibrillarin OS=Mus musculus OX=10090 GN=Fbl PE=1 SV=2; rRNA 2'-O-methyltransferase fibrillarin (Fragment) OS=Mus musculus OX=10090 GN=Fbl PE=1 SV=1 1 2 2 0.5158 0 1 1 1 824.51782 1648.02837 1648.02483 2.15 0.00177 0/0 0 0 5023717 HCD 30 MS2 45.81407 262.5 110 77.1884 23843 23843 23842 QEplus033719.raw F4 257.3 250.8 302.9 216.5 265.2 282.4 311 2.85 1 FALSE 1.14E-05 3.86E-06 1.126 -250 120385 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSGTAEVELK [K].gSGTAEVELk.[K] N-Term(TMT6plex); K10(TMT6plex) 7 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480; A0A1L1SU37; A0A1L1SSN6; A0A1L1SUV0; A0A1L1SQV8; P52480-2; A0A1L1STV8 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1 0 3 3 0.4377 0 1 1 1 483.61713 1448.83683 1448.83608 0.52 0.00025 0/0 0 0 54250464 HCD 30 MS2 37.70765 724.5 25.693 77.1932 23845 23845 23842 QEplus033719.raw F4 717.8 589.3 749.3 665.8 800.8 824.3 438 3.13 2 FALSE 1.14E-05 0.0001638 0.816 -250 120403 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLEEGQAQAGQCPSLEGR [R].gLEEGQAQAGQcPSLEGR.[L] N-Term(TMT6plex); C12(Carbamidomethyl) 4 Q99K41 EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1 Q3UUU0; Q99K41; Q3U254; Q3USG5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; EMILIN-1 OS=Mus musculus OX=10090 GN=Emilin1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1; C1q domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Emilin1 PE=2 SV=1 0 3 3 0.8278 0 1 1 1 706.01068 2116.01749 2116.02905 -5.46 -0.00385 0/0 0 0 6120080.5 HCD 30 MS2 14.95438 289.3 110 77.2007 23848 23848 23842 QEplus033719.raw F4 292.2 250.7 312.9 268 306.4 305.8 122 6.04 1 FALSE 1.14E-05 6.31E-16 3.028 -250 120448 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VADISGDTQK [R].vADISGDTQk.[A] N-Term(TMT6plex); K10(TMT6plex) 5 Q78PY7 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 Q78PY7; Q3UZI3; Q3TW51; Q3TRW3; Q3TJ56 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 0 3 3 0.6339 0 1 1 1 497.95267 1491.84345 1491.84189 1.04 0.00052 0/0 0 0 55272420 HCD 30 MS2 15.60902 749.3 30.037 77.2229 23856 23856 23853 QEplus033719.raw F4 755.3 624 819.9 621.3 863.9 811.4 447 3.36 1 FALSE 1.14E-05 3.37E-05 0.947 -250 120457 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNASASSLKK [K].vNASASSLkk.[K] N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex) 2 Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 A0A0G2JDU7; Q61553 Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=1; Fascin OS=Mus musculus OX=10090 GN=Fscn1 PE=1 SV=4 1 3 3 0.4764 0 1 1 1 564.69275 1692.06369 1692.06228 0.83 0.00047 0/0 0 0 27365986 HCD 30 MS2 74.32577 1125 45.201 77.2251 23857 23857 23853 QEplus033719.raw F4 1157.2 839.5 1163.2 1218.3 1045.9 1326.1 182 2.12 1 FALSE 0.0002119 0.00433 0.518 -250 120465 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAGEIGEMK [R].nAGEIGEMk.[D] N-Term(TMT6plex); K9(TMT6plex) 4 Q68G78 Csda protein OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1 Q61478; Q68G78; Q9JKB3-2; Q64369 DbpA murine homologue OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1; Csda protein OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1; Isoform 2 of Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3; Y-box binding protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2bp3 PE=2 SV=1 0 2 2 0.5496 0 1 1 1 703.88776 1406.76824 1406.77137 -2.23 -0.00157 0/0 0 0 25026572 HCD 30 MS2 22.18013 1048.5 68.81 77.2274 23858 23858 23853 QEplus033719.raw F4 1116.3 768.7 1143.5 996.4 1008.7 1257.6 344 3.53 1 FALSE 1.14E-05 6.27E-06 1.086 -250 120474 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAMDNSEIAGEK [K].tAMDNSEIAGEk.[K] N-Term(TMT6plex); K12(TMT6plex) 13 Q8CAQ8; A0A0U1RP81 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1;MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q3U7N2; Q8CAQ8; E9QAY6; Q8CAQ8-2; Q3TZK4; A0A0U1RP81; Q3TVZ5; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5; A0A1B0GX08 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 0 3 3 0.7294 0 1 1 1 575.30237 1723.89255 1723.89367 -0.65 -0.00037 0/0 0 0 11210254 HCD 30 MS2 19.75707 990.8 110 77.2299 23859 23859 23853 QEplus033719.raw F4 970.4 805 1055.4 992.1 967.5 1154.1 271 3.77 2 FALSE 1.14E-05 5.59E-06 1.095 -250 120481 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFISDK [K].kFISDk.[D] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 1 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 1 3 3 0.3467 0 1 1 1 475.64148 1424.90989 1424.90801 1.31 0.00062 0/0 0 0 11647615 HCD 30 MS2 36.90573 1417.3 110 77.2324 23860 23860 23853 QEplus033719.raw F4 1542.8 1217 1393.8 1128.4 1903.2 1318.4 165 1.99 1 FALSE 0.001185 0.01618 0.319 -250 120491 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVEPIRPK [R].vVEPIRPk.[E] N-Term(TMT6plex); K8(TMT6plex) 1 Q6PDY2 2-aminoethanethiol dioxygenase OS=Mus musculus OX=10090 GN=Ado PE=1 SV=2 Q6PDY2 2-aminoethanethiol dioxygenase OS=Mus musculus OX=10090 GN=Ado PE=1 SV=2 0 3 3 0.5412 0 1 1 1 465.9743 1395.90836 1395.90879 -0.31 -0.00014 0/0 0 0 9137373 HCD 30 MS2 48.13877 949.3 105.328 77.2348 23861 23861 23853 QEplus033719.raw F4 973.3 904.9 1017.1 663.6 1220.3 916.3 63 2.79 1 FALSE 0.0007056 0.01026 0.4 -250 120499 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAELQTDHQGK [K].lAELQTDHQGk.[I] N-Term(TMT6plex); K11(TMT6plex) 2 Q8BVG4 Dipeptidyl peptidase 9 OS=Mus musculus OX=10090 GN=Dpp9 PE=1 SV=2 Q8BVG4-2; Q8BVG4 Isoform 2 of Dipeptidyl peptidase 9 OS=Mus musculus OX=10090 GN=Dpp9; Dipeptidyl peptidase 9 OS=Mus musculus OX=10090 GN=Dpp9 PE=1 SV=2 0 3 3 0.5498 0 1 1 1 566.6582 1697.96006 1697.95865 0.83 0.00047 0/0 0 0 17558920 HCD 30 MS2 29.60678 1724.6 91.121 77.2371 23862 23862 23853 QEplus033719.raw F4 1816.3 1278.6 1578.1 1964.6 1742.2 1967.6 421 2.51 1 FALSE 1.14E-05 8.48E-05 0.871 -250 120530 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IIAGDK [K].iIAGDk.[EN] N-Term(TMT6plex); K6(TMT6plex) 2 Q3UPL0 Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2 Q3UPL0; Q3UPL0-2 Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2; Isoform 2 of Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a 0 2 2 0.0789 0 1 1 1 537.84937 1074.69145 1074.69232 -0.8 -0.00043 0/0 0 0 68866488 HCD 30 MS2 50.77923 971.8 10.592 77.2513 23867 23867 23864 QEplus033719.raw F4 949.2 740.4 1051.6 747.6 1411.6 930.6 151 1.9 1 FALSE 0.005512 0.09325 0.025 -250 120531 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILAGDK [K].iLAGDk.[EN] N-Term(TMT6plex); K6(TMT6plex) 5 O88990; A1BN54; Q7TPR4 Alpha-actinin-3 OS=Mus musculus OX=10090 GN=Actn3 PE=2 SV=1;Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1;Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 Q99LJ3; O88990; A1BN54; Q7TPR4; Q3UYE4 Actn1 protein (Fragment) OS=Mus musculus OX=10090 GN=Actn1 PE=2 SV=1; Alpha-actinin-3 OS=Mus musculus OX=10090 GN=Actn3 PE=2 SV=1; Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1; Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Actn3 PE=2 SV=1 0 2 2 0.0789 0 1 2 2 537.84937 1074.69145 1074.69232 -0.8 -0.00043 0/0 0 0 68866488 HCD 30 MS2 50.77923 971.8 10.592 77.2513 23867 23867 23864 QEplus033719.raw F4 949.2 740.4 1051.6 747.6 1411.6 930.6 151 1.9 3 FALSE 0.005512 0.09325 0.025 -250 120540 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous INQQLDTK [R].iNQQLDTk.[QL] N-Term(TMT6plex); K8(TMT6plex) 11 Q5SX40; P13541; Q5SX39; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; Q5DTH2; Q3UUB1; Q8BLW0; I6L963; B1AR69; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; MKIAA4211 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 3 3 0.6193 0 1 1 1 473.28598 1417.84339 1417.8415 1.33 0.00063 0/0 0 0 20793204 HCD 30 MS2 42.66426 878.6 43.783 77.2536 23868 23868 23864 QEplus033719.raw F4 1026.7 399.3 791.4 1327.7 570.1 1156.6 535 3.31 4 FALSE 0.0003211 0.006223 0.474 -250 120543 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EHDPVGQMVNNPK [K].eHDPVGQMVNNPk.[I] N-Term(TMT6plex); K13(TMT6plex) 4 Q9ERK4 Exportin-2 OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1 F6ZEW4; Q9ERK4; E9Q1T9; Q9CSW8 Exportin-2 (Fragment) OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1; Exportin-2 OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1; Chromosome segregation 1-like protein OS=Mus musculus OX=10090 GN=Cse1l PE=1 SV=1; CAS_CSE1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Cse1l PE=2 SV=1 0 3 3 0.739 0 1 1 1 641.6767 1923.01554 1923.01585 -0.16 -0.0001 0/0 0 0 11186191 HCD 30 MS2 6.245073 618.4 110 77.2561 23869 23869 23864 QEplus033719.raw F4 590.5 539.8 681.6 466.9 756.9 674.9 390 5.67 1 FALSE 1.14E-05 1.74E-12 2.331 -250 120550 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVPLNASK [K].aVPLNASk.[Q] N-Term(TMT6plex); K8(TMT6plex) 2 Q9WV55 Vesicle-associated membrane protein-associated protein A OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=2 Q9WV55; A0A3B2W837 Vesicle-associated membrane protein-associated protein A OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=2; Vesicle-associated membrane protein-associated protein A (Fragment) OS=Mus musculus OX=10090 GN=Vapa PE=1 SV=1 0 3 3 0.5702 0 1 1 1 419.93631 1257.79438 1257.79309 1.02 0.00043 0/0 0 0 10006168 HCD 30 MS2 44.81101 739.4 98.379 77.2584 23870 23870 23864 QEplus033719.raw F4 718.9 633.5 852.6 589.3 752.7 889.4 220 2.35 1 FALSE 0.002688 0.05349 0.132 -250 120564 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVLYQTVSR [R].gVLYQTVSR.[K] N-Term(TMT6plex) 2 Q04857 Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 Q99LW4; Q04857 Col6a1 protein (Fragment) OS=Mus musculus OX=10090 GN=Col6a1 PE=2 SV=1; Collagen alpha-1(VI) chain OS=Mus musculus OX=10090 GN=Col6a1 PE=1 SV=1 0 2 2 0.6231 0 1 1 1 626.36737 1251.72746 1251.72585 1.29 0.00081 0/0 0 0 5085044.5 HCD 30 MS2 26.11412 914.4 110 77.2634 23872 23872 23864 QEplus033719.raw F4 858.1 879.6 1012 732.9 1099.2 904.8 364 3.21 1 FALSE 1.14E-05 1.42E-06 1.208 -250 120572 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AATADLEQYDR [K].aATADLEQYDR.[T] N-Term(TMT6plex) 3 P81117 Nucleobindin-2 OS=Mus musculus OX=10090 GN=Nucb2 PE=1 SV=2 P81117; Q3TV28; Q3UKN6 Nucleobindin-2 OS=Mus musculus OX=10090 GN=Nucb2 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Nucb2 PE=2 SV=1; Nucleobindin-2 OS=Mus musculus OX=10090 GN=Nucb2 PE=1 SV=1 0 2 2 0.5968 0 1 1 1 741.37512 1481.74297 1481.74335 -0.26 -0.00019 0/0 0 0 4285654.5 HCD 30 MS2 41.99494 569.5 110 77.266 23873 23873 23864 QEplus033719.raw F4 524.5 518.2 502.3 294.3 1122.8 454.7 143 2.53 1 FALSE 1.14E-05 4.65E-07 1.3 -250 120603 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STIIGESMSR [R].sTIIGESMSR.[L] N-Term(TMT6plex) 2 Q9D0I9 "Arginine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Rars1 PE=1 SV=2" Q3TVC5; Q9D0I9 "Arginine--tRNA ligase, cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Rars PE=2 SV=1; Arginine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Rars1 PE=1 SV=2" 0 2 2 0.6012 0 1 1 1 655.35309 1309.6989 1309.69832 0.45 0.00029 0/0 0 0 31220080 HCD 30 MS2 40.12042 1002.6 59.617 77.2806 23878 23878 23875 QEplus033719.raw F4 945.5 872.5 1196.7 902.6 1012.3 1085.9 267 3.41 1 FALSE 1.14E-05 3.68E-07 1.32 -250 120620 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NRPPFGQGYAQPGPGYR [R].nRPPFGQGYAQPGPGYR.[-] N-Term(TMT6plex) 3 Q9Z1A1 TFG protein OS=Mus musculus OX=10090 GN=Tfg PE=1 SV=1 Q9Z1A1; Q9D828; Q8C2C6 TFG protein OS=Mus musculus OX=10090 GN=Tfg PE=1 SV=1; PB1 domain-containing protein OS=Mus musculus OX=10090 GN=Tfg PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tfg PE=2 SV=1 0 3 3 0.7295 0 1 1 1 697.6958 2091.07285 2091.07217 0.32 0.00023 0/0 0 0 8733612 HCD 30 MS2 6.735926 478.5 110 77.2854 23880 23880 23875 QEplus033719.raw F4 459.2 399.5 530.4 399.7 544.3 537.9 289 5.62 1 FALSE 1.14E-05 6.31E-16 3.005 -250 120625 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HFELGGDK [K].hFELGGDk.[K] N-Term(TMT6plex); K8(TMT6plex) 2 Q5M9P1 Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1 A0A2I3BPG9; Q5M9P1 "Ribosomal protein L36A, pseudogene 1 OS=Mus musculus OX=10090 GN=Rpl36a-ps1 PE=3 SV=1; Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1" 0 2 2 0.4174 0 1 1 1 680.88574 1360.76421 1360.76252 1.24 0.00084 0/0 0 0 8320396.5 HCD 30 MS2 39.27822 1016 110 77.2879 23881 23881 23875 QEplus033719.raw F4 1039.9 897.7 1117.8 841.5 1067.1 1132 385 3.21 1 FALSE 1.14E-05 0.0001087 0.85 -250 120636 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSDATTSTLK [R].vSDATTSTLk.[L] N-Term(TMT6plex); K10(TMT6plex) 4 Q60847 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3 Q60847; E9PX70; Q60847-5; Q60847-2 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3; Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1; Isoform 5 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 2 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 0 2 2 0.6199 0 1 1 1 740.93579 1480.86431 1480.86229 1.36 0.00101 0/0 0 0 11295368 HCD 30 MS2 29.08415 564.1 110 77.2929 23883 23883 23875 QEplus033719.raw F4 544.9 519.7 503 260.8 1126.7 429.8 408 3.42 1 FALSE 1.14E-05 3.19E-08 1.522 -250 120649 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APTAQVESFR [R].aPTAQVESFR.[I] N-Term(TMT6plex) 7 Q80YX1 Tenascin OS=Mus musculus OX=10090 GN=Tnc PE=1 SV=1 Q80YX1-4; Q80YX1; Q148T4; Q148T5; Q80YX1-2; Q80YX1-3; Q80YX1-5 Isoform 4 of Tenascin OS=Mus musculus OX=10090 GN=Tnc; Tenascin OS=Mus musculus OX=10090 GN=Tnc PE=1 SV=1; Tnc protein OS=Mus musculus OX=10090 GN=Tnc PE=2 SV=1; Tnc protein OS=Mus musculus OX=10090 GN=Tnc PE=2 SV=1; Isoform 2 of Tenascin OS=Mus musculus OX=10090 GN=Tnc; Isoform 3 of Tenascin OS=Mus musculus OX=10090 GN=Tnc; Isoform 5 of Tenascin OS=Mus musculus OX=10090 GN=Tnc 0 2 2 0.5971 0 1 1 1 667.86749 1334.72771 1334.72658 0.85 0.00056 0/0 0 0 7692238 HCD 30 MS2 10.63917 639.2 110 77.2979 23885 23885 23875 QEplus033719.raw F4 689.1 517.3 651.6 522.1 754.1 701.2 350 3.45 1 FALSE 1.14E-05 0.0001699 0.813 -250 120659 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSVWTK [R].gSVWTk.[A] N-Term(TMT6plex); K6(TMT6plex) 3 Q9D0F3 Protein ERGIC-53 OS=Mus musculus OX=10090 GN=Lman1 PE=1 SV=1 D3Z5B9; Q9D0F3; Q3U944 Protein ERGIC-53 (Fragment) OS=Mus musculus OX=10090 GN=Lman1 PE=1 SV=1; Protein ERGIC-53 OS=Mus musculus OX=10090 GN=Lman1 PE=1 SV=1; L-type lectin-like domain-containing protein OS=Mus musculus OX=10090 GN=Lman1 PE=2 SV=1 0 2 2 0.0573 0 1 1 1 568.34436 1135.68144 1135.68757 -5.39 -0.00306 0/0 0 0 8615895 HCD 30 MS2 65.25666 1641.8 110 77.3052 23887 23887 23886 QEplus033719.raw F4 1552.5 1373.7 1731.5 1395.3 1932 1865.7 316 1.57 1 FALSE 0.00656 0.1047 -0.006 -250 120669 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHVAPCFDASK [K].aHVAPcFDASk.[V] N-Term(TMT6plex); C6(Carbamidomethyl); K11(TMT6plex) 5 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.695 0 1 1 1 554.30042 1660.88669 1660.88813 -0.87 -0.00048 0/0 0 0 25470122 HCD 30 MS2 45.89863 739 41.137 77.3075 23888 23888 23886 QEplus033719.raw F4 720.8 694.1 779.4 557.1 916.7 766.1 370 4.23 1 FALSE 1.14E-05 2.13E-06 1.175 -250 120692 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLNTNIDGR [R].vLNTNIDGR.[R] N-Term(TMT6plex) 6 Q561N5 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1 S4R1N6; Q561N5; Q3TW65; F6YVP7; A0A3Q4EGP3; A0A1Y7VKY1 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=3 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps6 PE=3 SV=2; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=4 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps5 PE=3 SV=1 0 2 2 0.5869 0 1 1 1 615.85376 1230.70024 1230.70037 -0.1 -0.00006 0/0 0 0 31199628 HCD 30 MS2 32.19659 1023.9 67.867 77.3143 23891 23891 23886 QEplus033719.raw F4 1089 921.5 1129.2 821.7 1117.9 1064 364 3.05 1 FALSE 1.14E-05 1.79E-05 0.999 -250 120701 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETAENYLGHTAK [K].eTAENYLGHTAk.[N] N-Term(TMT6plex); K12(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 0 3 3 0.6782 0 1 1 1 597.99219 1791.96201 1791.96413 -1.19 -0.00071 0/0 0 0 29288256 HCD 30 MS2 31.80433 769.6 56.091 77.3165 23892 23892 23886 QEplus033719.raw F4 739.9 569.7 849.5 746.2 789.1 922.9 391 4.32 1 FALSE 1.14E-05 5.73E-08 1.473 -250 120705 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VKLPSGSK [R].vkLPSGSk.[K] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 4 P62918 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2 Q3UJS0; P62918; Q9Z237; Q3THC7 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2; Ribosomal protein L8 (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1 1 3 3 0.4776 0 1 1 1 501.66745 1502.9878 1502.98733 0.31 0.00016 0/0 0 0 23220774 HCD 30 MS2 38.61524 1271.3 60.193 77.3188 23893 23893 23886 QEplus033719.raw F4 1115.7 1463.4 1500.9 1085 1154.2 1308.9 246 2.45 1 FALSE 0.0009259 0.01277 0.362 -250 120714 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHSIQIMK [R].aHSIQIMk.[V] N-Term(TMT6plex); K8(TMT6plex) 6 P62717 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1 A0A1D5RME4; Q05CK2; Q3THJ0; A0A1D5RLW5; A0A1D5RM85; P62717 60S ribosomal protein L18a (Fragment) OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; Rpl18a protein OS=Mus musculus OX=10090 GN=Rpl18a PE=2 SV=1; 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=2 SV=1; 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a (Fragment) OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1 0 3 3 0.6811 0 1 1 1 462.61633 1385.83445 1385.83391 0.39 0.00018 0/0 0 0 21983856 HCD 30 MS2 37.70128 709.5 34.623 77.3211 23894 23894 23886 QEplus033719.raw F4 711.6 565.5 790.4 672.5 667.6 849.2 296 4.17 1 FALSE 1.14E-05 1.79E-05 1 -250 120720 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIPVVEHK [K].gIPVVEHk.[V] N-Term(TMT6plex); K8(TMT6plex) 5 Q01320; Q64511 DNA topoisomerase 2-alpha OS=Mus musculus OX=10090 GN=Top2a PE=1 SV=2;DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2 Q01320; Q3TR62; Q8BRY5; Q64511; Q6PET9 DNA topoisomerase 2-alpha OS=Mus musculus OX=10090 GN=Top2a PE=1 SV=2; DNA topoisomerase 2 (Fragment) OS=Mus musculus OX=10090 GN=Top2b PE=2 SV=1; DNA topoisomerase 2 (Fragment) OS=Mus musculus OX=10090 GN=Top2b PE=2 SV=1; DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2; DNA topoisomerase 2 (Fragment) OS=Mus musculus OX=10090 GN=Top2a PE=2 SV=1 0 3 3 0.5559 0 1 1 1 446.28333 1336.83542 1336.83529 0.1 0.00004 0/0 0 0 19988946 HCD 30 MS2 52.06599 436 35.142 77.3233 23895 23895 23886 QEplus033719.raw F4 431.9 373.7 458.2 292.3 563.5 496.1 237 3.22 2 FALSE 1.14E-05 0.0004338 0.734 -250 120730 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NAGEIGEMK [R].nAGEIGEMk.[D] N-Term(TMT6plex); K9(TMT6plex) 4 Q68G78 Csda protein OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1 Q61478; Q68G78; Q9JKB3-2; Q64369 DbpA murine homologue OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1; Csda protein OS=Mus musculus OX=10090 GN=Ybx3 PE=2 SV=1; Isoform 2 of Y-box-binding protein 3 OS=Mus musculus OX=10090 GN=Ybx3; Y-box binding protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2bp3 PE=2 SV=1 0 3 3 0.4901 0 1 1 1 469.59616 1406.77393 1406.77137 1.82 0.00085 0/0 0 0 12723311 HCD 30 MS2 36.15966 971.7 110 77.3258 23896 23896 23886 QEplus033719.raw F4 1293.7 649.8 909.7 874.7 1134.6 967.6 396 3.02 1 FALSE 2.26E-05 0.001098 0.654 -250 120760 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IAHIMGPPDR [K].iAHIMGPPDR.[C] N-Term(TMT6plex) 3 Q3U0V1 Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2 Q3U0V1; A0A3B2WCD8; A0A3B2W465 Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2; Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=1; Far upstream element-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=1 0 3 3 0.6873 0 1 1 1 445.91837 1335.74054 1335.74046 0.06 0.00003 0/0 0 0 25736134 HCD 30 MS2 38.48828 389.8 33.052 77.3423 23902 23902 23897 QEplus033719.raw F4 360.4 330.5 408.5 285.9 500.1 453.6 390 3.87 1 FALSE 1.14E-05 3.92E-05 0.935 -250 120769 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CLSSLKEER [R].cLSSLkEER.[VG] N-Term(TMT6plex); C1(Carbamidomethyl); K6(TMT6plex) 4 Q9DCD0 "6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=1 SV=3" Q9DCD0; Q3UAG2; Q91V28; Q91YT9 "6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=1 SV=3; 6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=2 SV=1; 6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=2 SV=1; 6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus OX=10090 GN=Pgd PE=2 SV=1" 1 3 3 0.4699 0 1 1 1 527.29993 1579.88523 1579.8878 -1.63 -0.00086 0/0 0 0 21101044 HCD 30 MS2 38.54101 1177.2 64.552 77.3446 23903 23903 23897 QEplus033719.raw F4 1043.3 1389.9 1338.1 993.8 1277.1 1021.2 466 2.66 1 FALSE 0.002049 0.03635 0.188 -250 120796 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VACAEEWQESR [K].vAcAEEWQESR.[T] N-Term(TMT6plex); C3(Carbamidomethyl) 2 Q8BH58 TIP41-like protein OS=Mus musculus OX=10090 GN=Tiprl PE=1 SV=1 Q8BH58; A0A0A6YY87 TIP41-like protein OS=Mus musculus OX=10090 GN=Tiprl PE=1 SV=1; TIP41-like protein (Fragment) OS=Mus musculus OX=10090 GN=Tiprl PE=1 SV=1 0 2 2 0.7769 0 1 1 1 797.38074 1593.7542 1593.75287 0.83 0.00066 0/0 0 0 8791113 HCD 30 MS2 13.73944 356.7 110 77.3545 23907 23907 23897 QEplus033719.raw F4 372.4 310.8 389 272.4 399.4 396 82 3.99 1 FALSE 1.14E-05 1.69E-08 1.574 -250 120801 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHFGTTGK [R].iHFGTTGk.[L] N-Term(TMT6plex); K8(TMT6plex) 8 Q5SX40; P13541; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q5SX40; P13541; G3UW82; B2RWX0; Q8BLW0; I6L963; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 3 3 0.654 0 1 1 1 440.26782 1318.78891 1318.78834 0.43 0.00019 0/0 0 0 109714952 HCD 30 MS2 6.511149 418.1 9.966 77.3618 23909 23909 23908 QEplus033719.raw F4 482.2 62.1 287.7 978.9 70.4 627 468 3.41 3 FALSE 1.14E-05 0.0002172 0.793 -250 120809 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNFTVDCSK [K].sNFTVDcSk.[A] N-Term(TMT6plex); C7(Carbamidomethyl); K9(TMT6plex) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; Q4FZG4; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Flna protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.0902 0 1 1 1 758.39838 1515.78948 1515.78775 1.14 0.00086 0/0 0 0 28094284 HCD 30 MS2 4.375679 730.3 57.941 77.3641 23910 23910 23908 QEplus033719.raw F4 683.1 679.8 808.2 539 979.4 692.2 221 3.66 1 FALSE 1.14E-05 4.71E-06 1.109 -250 120815 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENAWVK [K].eNAWVk.[R] N-Term(TMT6plex); K6(TMT6plex) 7 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 0 2 2 0.3969 0 1 1 1 602.8587 1204.71013 1204.70903 0.91 0.00055 0/0 0 0 26289624 HCD 30 MS2 9.379167 1223.7 56.453 77.3664 23911 23911 23908 QEplus033719.raw F4 1317.3 1070.8 1335.6 931.5 1380.7 1306.4 462 2.62 1 FALSE 0.002836 0.05557 0.126 -250 120821 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLVNDAQK [R].vLVNDAQk.[V] N-Term(TMT6plex); K8(TMT6plex) 3 Q5EBP9 Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 Q62318-2; Q5EBP9; Q3UDN8 Isoform 2 of Transcription intermediary factor 1-beta OS=Mus musculus OX=10090 GN=Trim28; Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 0 2 2 0.2727 0 1 1 1 672.91681 1344.82634 1344.82512 0.91 0.00061 0/0 0 0 17599444 HCD 30 MS2 0 1238.2 87.712 77.3687 23912 23912 23908 QEplus033719.raw F4 1299.4 1279.3 1331 846.9 1466.1 1206.5 468 3.41 1 FALSE 1.14E-05 0.0001536 0.821 -250 120830 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MLGAPEEADANEEGVRR [R].mLGAPEEADANEEGVRR.[A] N-Term(TMT6plex) 4 A2APX3 Cystatin-C (Fragment) OS=Mus musculus OX=10090 GN=Cst3 PE=1 SV=1 A2APX3; Q3U5K7; P21460; Q9EPX9 Cystatin-C (Fragment) OS=Mus musculus OX=10090 GN=Cst3 PE=1 SV=1; Cystatin domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Cst3 PE=2 SV=1; Cystatin-C OS=Mus musculus OX=10090 GN=Cst3 PE=1 SV=2; Cystatin C OS=Mus musculus OX=10090 GN=Cst3 PE=2 SV=1 1 3 3 0.7705 0 1 1 1 691.6778 2073.01883 2073.02323 -2.12 -0.00147 0/0 0 0 12004914 HCD 30 MS2 4.14041 366.6 110 77.3712 23913 23913 23908 QEplus033719.raw F4 347.6 273.4 391.1 346.3 374.2 466.7 184 6.58 1 FALSE 1.14E-05 6.31E-16 3.196 -250 120842 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAEHLDFK [K].kAEHLDFk.[H] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 1 Q9ERU9 E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 Q9ERU9 E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2 1 4 4 0.4618 0 1 1 1 419.50897 1675.01406 1675.0146 -0.32 -0.00014 0/0 0 0 7006681.5 HCD 30 MS2 42.72378 585.7 110 77.3762 23915 23915 23908 QEplus033719.raw F4 624.1 487.2 666.5 409.1 626 701.5 360 3.01 1 FALSE 0.001702 0.02791 0.227 -250 120858 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAGVFVPR [K].eAGVFVPR.[S] N-Term(TMT6plex) 5 Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1;ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TED3; Q3UEA1; Q3UVY4; Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate (pro-S-)-lyase (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 0 2 2 0.5076 0 1 1 1 552.32483 1103.64238 1103.64106 1.2 0.00066 0/0 0 0 52702208 HCD 30 MS2 22.10978 763.7 20.904 77.3807 23917 23917 23908 QEplus033719.raw F4 747.4 760.4 870 597.3 818.8 788 323 2.62 2 FALSE 5.44E-05 0.001925 0.602 -250 120869 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SNFTVDCSK [K].sNFTVDcSk.[A] N-Term(TMT6plex); C7(Carbamidomethyl); K9(TMT6plex) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; B7FAV1; Q4FZG4; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Flna protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.0494 0 1 1 1 505.93454 1515.78907 1515.78775 0.87 0.00044 0/0 0 0 16316763 HCD 30 MS2 48.85579 1208.8 74.526 77.3903 23920 23920 23919 QEplus033719.raw F4 1234.6 727.7 1168.4 1498.4 954.3 1669.5 216 3.24 1 FALSE 0.001541 0.02313 0.257 -250 120884 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VCMDLR [K].vcMDLR.[A] N-Term(TMT6plex); C2(Carbamidomethyl) 3 P13412 "Troponin I, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnni2 PE=2 SV=2" A0A1B0GRY8; P13412; A2A6J8 "Troponin I, fast skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni2 PE=1 SV=1; Troponin I, fast skeletal muscle OS=Mus musculus OX=10090 GN=Tnni2 PE=2 SV=2; Troponin I, fast skeletal muscle (Fragment) OS=Mus musculus OX=10090 GN=Tnni2 PE=1 SV=1" 0 2 2 0.467 0 1 1 1 511.77057 1022.53386 1022.53244 1.39 0.00071 0/0 0 0 90546160 HCD 30 MS2 25.77209 819.6 16.321 77.3948 23922 23922 23919 QEplus033719.raw F4 956.3 255.3 814.1 1123.7 467.3 1301 116 1.97 1 FALSE 0.004732 0.08319 0.053 -250 120892 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDSTEPPYSQK [K].mDSTEPPYSQk.[R] N-Term(TMT6plex); K11(TMT6plex) 6 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 0 3 3 0.6848 0 1 1 1 580.96802 1740.8895 1740.88786 0.94 0.00055 0/0 0 0 60760228 HCD 30 MS2 28.4365 745.2 24.892 77.397 23923 23923 23919 QEplus033719.raw F4 791.2 533.4 776.2 630.6 804 935.9 251 3.68 1 FALSE 1.14E-05 1.48E-05 1.015 -250 120908 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATDAEADVASLNRR [K].aTDAEADVASLNRR.[I] N-Term(TMT6plex) 17 P58774; A2AIM4; P58774-2; E9Q450 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 Q9D1R6; Q91VH3; Q8BSH3; E9Q452; P58774; F8WID5; S4R2U0; A2AIM4; Q3SX28; P58774-2; A2AIM5; E9Q454; Q61344; E9Q450; Q564G1; Q8BP43; P58771 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=8; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 1 3 3 0.7026 0 1 1 1 573.30664 1717.90537 1717.90304 1.35 0.00078 0/0 0 0 50159532 HCD 30 MS2 48.6793 922.5 25.81 77.4016 23925 23925 23919 QEplus033719.raw F4 918 651.2 988.3 882.6 881 1214 324 4.17 4 TRUE 1.14E-05 6.31E-16 2.993 -250 120915 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EPWDGK [R].ePWDGk.[D] N-Term(TMT6plex); K6(TMT6plex) 5 Q922R8 Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=3 Q3TML0; Q922R8; F7DBQ0; Q3THH1; Q3TJL8 Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=1; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=3; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=1 SV=1; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=2 SV=1; Protein disulfide-isomerase A6 OS=Mus musculus OX=10090 GN=Pdia6 PE=2 SV=1 0 2 2 0.2303 0 1 1 1 595.33466 1189.66203 1189.66174 0.24 0.00015 0/0 0 0 33433658 HCD 30 MS2 34.58135 1115 37.664 77.4039 23926 23926 23919 QEplus033719.raw F4 1119 903.6 1219.2 961.2 1230.5 1256.7 331 1.78 1 FALSE 0.005374 0.09165 0.03 -250 120921 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEYPSIK [K].nEYPSIk.[L] N-Term(TMT6plex); K7(TMT6plex) 4 Q3U3C2 Epididymal secretory protein E1 OS=Mus musculus OX=10090 GN=Npc2 PE=2 SV=1 Q3TXQ4; Q3U3C2; Q9Z0J0; Q3U8F7 Epididymal secretory protein E1 OS=Mus musculus OX=10090 GN=Npc2 PE=2 SV=1; Epididymal secretory protein E1 OS=Mus musculus OX=10090 GN=Npc2 PE=2 SV=1; NPC intracellular cholesterol transporter 2 OS=Mus musculus OX=10090 GN=Npc2 PE=1 SV=1; Epididymal secretory protein E1 OS=Mus musculus OX=10090 GN=Npc2 PE=2 SV=1 0 2 2 0.2073 0 1 1 1 654.88251 1308.75774 1308.75637 1.04 0.00068 0/0 0 0 15776286 HCD 30 MS2 32.19349 1040.6 103.026 77.4063 23927 23927 23919 QEplus033719.raw F4 985.8 969.7 1272.5 832.1 1111.1 1072.6 425 2.75 1 FALSE 0.0003996 0.007023 0.458 -250 120927 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENAWVK [K].eNAWVk.[R] N-Term(TMT6plex); K6(TMT6plex) 7 Q8BGD9 Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1 Q3TLQ9; Q922K6; Q3TDD8; Q8BGD9; Q3TSY9; Q3UGC0; Q3THB0 RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; Eukaryotic translation initiation factor 4B OS=Mus musculus OX=10090 GN=Eif4b PE=1 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1; RRM domain-containing protein OS=Mus musculus OX=10090 GN=Eif4b PE=2 SV=1 0 3 3 0.3289 0 1 1 1 402.24191 1204.71119 1204.70903 1.79 0.00072 0/0 0 0 3317915 HCD 30 MS2 56.90707 352.9 110 77.4087 23928 23928 23919 QEplus033719.raw F4 358.9 280.3 391.8 266.6 398 422 466 2.25 1 FALSE 0.002688 0.05339 0.132 -250 120953 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HQEGEIFDTEK [R].hQEGEIFDTEk.[E] N-Term(TMT6plex); K11(TMT6plex) 1 P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 0 3 3 0.7117 0 1 1 1 597.64905 1790.93259 1790.9325 0.05 0.00003 0/0 0 0 7904310 HCD 30 MS2 18.2552 981.9 110 77.421 23932 23932 23930 QEplus033719.raw F4 1104.1 749.1 1020.5 840.4 1059.5 1117.6 278 3.85 1 FALSE 1.14E-05 9.93E-07 1.238 -250 120958 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ACQIFVR [K].acQIFVR.[N] N-Term(TMT6plex); C2(Carbamidomethyl) 10 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; Q9D0E1-2; Q3TQ66; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A3Q4L2X3; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; RRM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 2 2 0.5849 0 1 1 1 561.81885 1122.63042 1122.62912 1.16 0.00065 0/0 0 0 38008372 HCD 30 MS2 32.10299 730.6 28.976 77.4233 23933 23933 23930 QEplus033719.raw F4 764.2 665 802.1 559.9 870.5 722.1 226 2.12 1 FALSE 0.001851 0.03146 0.209 -250 120975 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIEGLDR [K].vIEGLDR.[G] N-Term(TMT6plex) 3 Q61576 Peptidyl-prolyl cis-trans isomerase FKBP10 OS=Mus musculus OX=10090 GN=Fkbp10 PE=1 SV=2 Q61576; A2A4H9; Q3UNJ3 Peptidyl-prolyl cis-trans isomerase FKBP10 OS=Mus musculus OX=10090 GN=Fkbp10 PE=1 SV=2; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp10 PE=1 SV=1; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp10 PE=2 SV=1 0 2 2 0.2878 0 1 1 1 515.80908 1030.61089 1030.60943 1.42 0.00073 0/0 0 0 20661112 HCD 30 MS2 51.19941 843.9 42.085 77.4278 23935 23935 23930 QEplus033719.raw F4 924.4 628.2 834 800.4 922.7 953.4 368 2.71 1 FALSE 0.0005076 0.007871 0.441 -250 120984 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVASVTPEK [R].aAVASVTPEk.[Q] N-Term(TMT6plex); K10(TMT6plex) 9 H3BJU7 Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1 H3BJU7; H3BKH9; Q60875; Q60875-5; H3BJX8; H3BJ40; H3BJ45; A0A2X0SFE2; Q60875-4 Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=4; Isoform 5 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=2; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Guanine nucleotide exchange factor H1 OS=Mus musculus OX=10090 GN=Arhgef2 PE=1 SV=1; Guanine nucleotide exchange factor H1 (Fragment) OS=Mus musculus OX=10090 GN=ARHGEF2 PE=4 SV=1; Isoform 4 of Rho guanine nucleotide exchange factor 2 OS=Mus musculus OX=10090 GN=Arhgef2 0 2 2 0.53 0 1 1 1 715.93469 1430.86211 1430.8619 0.14 0.0001 0/0 0 0 10216908 HCD 30 MS2 31.21054 636.3 110 77.4303 23936 23936 23930 QEplus033719.raw F4 600 531.2 720.8 526.1 744.7 694.8 449 4 1 FALSE 1.14E-05 1.13E-07 1.417 -250 120994 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MTDLSK [K].mTDLSk.[G] N-Term(TMT6plex); K6(TMT6plex) 1 Q9D7M1 Glucose-induced degradation protein 8 homolog OS=Mus musculus OX=10090 GN=Gid8 PE=1 SV=1 Q9D7M1 Glucose-induced degradation protein 8 homolog OS=Mus musculus OX=10090 GN=Gid8 PE=1 SV=1 0 2 2 0.2537 0 1 1 1 576.83807 1152.66887 1152.66987 -0.86 -0.0005 0/0 0 0 6914387 HCD 30 MS2 53.00496 1299 110 77.4328 23937 23937 23930 QEplus033719.raw F4 1211.5 1088.8 1392.1 1201.2 1423 1477.4 275 1.34 1 FALSE 0.00919 0.1673 -0.105 -250 121020 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NNPEPWNK [K].nNPEPWNk.[L] N-Term(TMT6plex); K8(TMT6plex) 2 Q62425 Cytochrome c oxidase subunit NDUFA4 OS=Mus musculus OX=10090 GN=Ndufa4 PE=1 SV=2 Q62425; A0A0N4SVQ1 Cytochrome c oxidase subunit NDUFA4 OS=Mus musculus OX=10090 GN=Ndufa4 PE=1 SV=2; Cytochrome c oxidase subunit NDUFA4 OS=Mus musculus OX=10090 GN=Ndufa4 PE=1 SV=1 0 2 2 0.6105 0 1 1 1 728.90125 1456.79521 1456.79488 0.23 0.00016 0/0 0 0 2381840 HCD 30 MS2 66.35352 335.4 110 77.4474 23942 23942 23941 QEplus033719.raw F4 338.2 243.7 362.4 316.8 352.2 399.2 291 2.85 1 FALSE 6.52E-05 0.002692 0.569 -250 121027 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGVNSELVK [R].sGVNSELVk.[R] N-Term(TMT6plex); K9(TMT6plex) 5 Q7TNV0; Q9CVL7 Protein DEK OS=Mus musculus OX=10090 GN=Dek PE=1 SV=1;SAP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dek PE=2 SV=1 Q7TNV0; E9Q8Y1; Q3U4W4; Q9CVL7; D3YVJ6 Protein DEK OS=Mus musculus OX=10090 GN=Dek PE=1 SV=1; Protein DEK (Fragment) OS=Mus musculus OX=10090 GN=Dek PE=1 SV=1; SAP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dek PE=2 SV=1; SAP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Dek PE=2 SV=1; Protein DEK (Fragment) OS=Mus musculus OX=10090 GN=Dek PE=1 SV=1 0 2 2 0.5629 0 1 1 1 695.91858 1390.82988 1390.8306 -0.52 -0.00036 0/0 0 0 14310484 HCD 30 MS2 40.34055 1097.4 110 77.4499 23943 23943 23941 QEplus033719.raw F4 1161.2 969.1 1069.6 983.8 1274.5 1126.5 434 2.86 2 FALSE 1.14E-05 1.12E-05 1.038 -250 121035 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEREQFVEFR [K].tEREQFVEFR.[D] N-Term(TMT6plex) 7 Q6XLQ8; Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1;Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 Q3UG11; G3UXA8; Q6XLQ8; Q3TL33; G3V004; Q3TQD1; Q3TUF3 Calumenin OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1; Calumenin (Fragment) OS=Mus musculus OX=10090 GN=Calu PE=2 SV=1; Calumenin OS=Mus musculus OX=10090 GN=Calu PE=1 SV=1 1 3 3 0.5486 0 1 1 1 523.94653 1569.82505 1569.82227 1.77 0.00092 0/0 0 0 15284200 HCD 30 MS2 47.67772 1324.2 77.719 77.4522 23944 23944 23941 QEplus033719.raw F4 1371 1067.2 1374.2 1135.2 1495.8 1501.7 282 3.7 2 FALSE 1.14E-05 2.58E-06 1.159 -250 121042 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AHSIQIMK [R].aHSIQIMk.[V] N-Term(TMT6plex); K8(TMT6plex) 6 P62717 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1 A0A1D5RME4; Q05CK2; Q3THJ0; A0A1D5RLW5; A0A1D5RM85; P62717 60S ribosomal protein L18a (Fragment) OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; Rpl18a protein OS=Mus musculus OX=10090 GN=Rpl18a PE=2 SV=1; 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=2 SV=1; 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a (Fragment) OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1; 60S ribosomal protein L18a OS=Mus musculus OX=10090 GN=Rpl18a PE=1 SV=1 0 2 2 0.6557 0 1 1 1 693.42334 1385.8394 1385.83391 3.96 0.00275 0/0 0 0 14495139 HCD 30 MS2 5.968794 905.4 97.807 77.4545 23945 23945 23941 QEplus033719.raw F4 922.6 772.7 1043.5 781.4 904.5 1007.5 294 3.66 1 FALSE 1.14E-05 0.0001519 0.822 -250 121050 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KFISDK [K].kFISDk.[D] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 1 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 1 2 2 0.3991 0 1 1 1 712.95746 1424.90764 1424.90801 -0.26 -0.00019 0/0 0 0 10507487 HCD 30 MS2 23.45561 656.8 110 77.457 23946 23946 23941 QEplus033719.raw F4 637.3 535.2 659.8 639.3 799.6 669.4 171 2.18 1 FALSE 0.007427 0.1204 -0.043 -250 121059 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous INHWDGAIR [K].iNHWDGAIR.[E] N-Term(TMT6plex) 1 Q8BYA0 Tubulin-specific chaperone D OS=Mus musculus OX=10090 GN=Tbcd PE=1 SV=1 Q8BYA0 Tubulin-specific chaperone D OS=Mus musculus OX=10090 GN=Tbcd PE=1 SV=1 0 3 3 0.4299 0 1 1 1 437.57706 1310.71662 1310.71668 -0.05 -0.00002 0/0 0 0 8103352.5 HCD 30 MS2 26.25119 623.3 110 77.4595 23947 23947 23941 QEplus033719.raw F4 648.3 459.1 648 519.8 696.1 768.6 276 3.28 1 FALSE 3.35E-05 0.001125 0.652 -250 121086 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQALQSLQQQR [K].eQALQSLQQQR.[Q] N-Term(TMT6plex) 2 Q8BL66 Early endosome antigen 1 OS=Mus musculus OX=10090 GN=Eea1 PE=1 SV=2 Q8BL66; Q05CS7 Early endosome antigen 1 OS=Mus musculus OX=10090 GN=Eea1 PE=1 SV=2; Eea1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eea1 PE=2 SV=1 0 2 2 0.5592 0 1 1 1 779.42896 1557.85063 1557.85463 -2.57 -0.002 0/0 0 0 2698858.5 HCD 30 MS2 0 251.7 110 77.4671 23950 23950 23941 QEplus033719.raw F4 260.7 208.3 269.4 196.9 270.8 304 345 3.38 1 FALSE 1.14E-05 3.27E-07 1.33 -250 121094 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CEFAVGYQR [K].cEFAVGYQR.[L] N-Term(TMT6plex); C1(Carbamidomethyl) 4 Q8BMJ2 "Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2" Q6ZPT2; Q8BMJ2; Q9CQM4; A0A494BA30 "Leucyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1; Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2; Leucyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1; Leucyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Lars PE=1 SV=1" 0 2 2 0.6758 0 1 1 1 679.84082 1358.67436 1358.67244 1.42 0.00096 0/0 0 0 13832782 HCD 30 MS2 52.23566 990 103.61 77.4695 23951 23951 23941 QEplus033719.raw F4 1015.6 813.2 1086.7 912.8 991.1 1120.9 106 2.56 1 FALSE 0.0002019 0.004192 0.522 -250 121104 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQVEYK [K].vQVEYk.[G] N-Term(TMT6plex); K6(TMT6plex) 17 Q3TEK2; B7U582 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1;Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; D3Z5E2; Q3TH56; B7U582; Q3TZJ3; P63017; Q3TQ13; Q3TB63; Q504P4; Q3KQJ4; Q3ULM1; Q3UBA6; Q3TF16; P17156 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Hspa8 protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Mus musculus OX=10090 GN=Hspa2 PE=1 SV=2 0 2 2 0.0879 0 1 1 1 612.3739 1223.74053 1223.73999 0.43 0.00027 0/0 0 0 50291228 HCD 30 MS2 6.125821 950.5 28.254 77.479 23954 23954 23952 QEplus033719.raw F4 892.8 710.8 1025.3 794.7 1148.6 1130.9 326 2.73 2 FALSE 0.003826 0.07238 0.081 -250 121111 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EASGILK [R].eASGILk.[VG] N-Term(TMT6plex); K7(TMT6plex) 3 Q9CQQ8 U6 snRNA-associated Sm-like protein LSm7 OS=Mus musculus OX=10090 GN=Lsm7 PE=1 SV=1 Q8VHK1; A0A1W2P6N1; Q9CQQ8 Caskin-2 OS=Mus musculus OX=10090 GN=Caskin2 PE=1 SV=3; U6 snRNA-associated Sm-like protein LSm7 OS=Mus musculus OX=10090 GN=Lsm7 PE=1 SV=1; U6 snRNA-associated Sm-like protein LSm7 OS=Mus musculus OX=10090 GN=Lsm7 PE=1 SV=1 0 2 2 0.1184 0 1 1 1 588.3739 1175.74053 1175.73999 0.45 0.00027 0/0 0 0 47455712 HCD 30 MS2 17.15805 1104.7 24.824 77.4813 23955 23955 23952 QEplus033719.raw F4 1076.3 998.6 1017.4 918.7 1464.8 1152.3 440 2.28 1 FALSE 0.0006035 0.008878 0.423 -250 121119 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RATDVMIAGK [K].rATDVMIAGk.[V] N-Term(TMT6plex); K10(TMT6plex) 5 Q3TF14 Adenosylhomocysteinase OS=Mus musculus OX=10090 GN=Ahcy PE=1 SV=1 Q3U4D1; Q8BPI7; Q3U5U5; Q3TF14; Q5M9P0 Adenosylhomocysteinase OS=Mus musculus OX=10090 PE=2 SV=1; Adenosylhomocysteinase (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Adenosylhomocysteinase OS=Mus musculus OX=10090 PE=2 SV=1; Adenosylhomocysteinase OS=Mus musculus OX=10090 GN=Ahcy PE=1 SV=1; Adenosylhomocysteinase OS=Mus musculus OX=10090 GN=Ahcy PE=2 SV=1 1 3 3 0.5744 0 1 1 1 507.30658 1519.90519 1519.90305 1.4 0.00071 0/0 0 0 29327994 HCD 30 MS2 34.09491 996.1 43.273 77.4836 23956 23956 23952 QEplus033719.raw F4 1032.2 823.1 1030.4 920 975.3 1195.4 426 4.77 1 FALSE 1.14E-05 9.18E-10 1.814 -250 121126 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSQETEALGR [R].lSQETEALGR.[S] N-Term(TMT6plex) 4 Q02819 Nucleobindin-1 OS=Mus musculus OX=10090 GN=Nucb1 PE=1 SV=2 A0A1C7CYU3; Q02819; A0A1B0GR41; Q8BRD3 Nucleobindin-1 OS=Mus musculus OX=10090 GN=Nucb1 PE=1 SV=1; Nucleobindin-1 OS=Mus musculus OX=10090 GN=Nucb1 PE=1 SV=2; Nucleobindin-1 (Fragment) OS=Mus musculus OX=10090 GN=Nucb1 PE=1 SV=1; Nucleobindin-1 OS=Mus musculus OX=10090 GN=Nucb1 PE=2 SV=1 0 2 2 0.6156 0 1 1 1 666.87054 1332.73381 1332.73206 1.31 0.00088 0/0 0 0 16981558 HCD 30 MS2 51.7686 1095.4 92.187 77.4858 23957 23957 23952 QEplus033719.raw F4 1069.6 947.2 1177.1 891.6 1293.7 1193.5 351 3.33 1 FALSE 1.14E-05 6.80E-08 1.459 -250 121133 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVASFK [K].aVASFk.[H-] N-Term(TMT6plex); K6(TMT6plex) 6 Q8CH69 Survival of motor neuron protein (Fragment) OS=Mus musculus OX=10090 GN=Smn PE=4 SV=1 Q8CH69; Q5PXT3; Q9JIC6; Q3UMN7; Q9JIC8; Q549F9 Survival of motor neuron protein (Fragment) OS=Mus musculus OX=10090 GN=Smn PE=4 SV=1; Survival of motor neuron OS=Mus musculus OX=10090 GN=Smn1 PE=2 SV=1; Smn protein (Fragment) OS=Mus musculus OX=10090 GN=Smn PE=4 SV=1; Tudor domain-containing protein OS=Mus musculus OX=10090 GN=Smn1 PE=2 SV=1; Smn protein (Fragment) OS=Mus musculus OX=10090 GN=Smn PE=4 SV=1; Survival of motor neuron protein OS=Mus musculus OX=10090 GN=Smn1 PE=1 SV=1 0 2 2 0.1038 0 1 1 1 540.84497 1080.68266 1080.68175 0.84 0.00046 0/0 0 0 14945020 HCD 30 MS2 54.86665 1336.6 78.002 77.4881 23958 23958 23952 QEplus033719.raw F4 1327.6 1209.9 1523.6 1031.6 1480.2 1446.6 64 2.12 1 FALSE 0.004906 0.0858 0.046 -250 121143 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSILSSK [K].gSILSSk.[Y] N-Term(TMT6plex); K7(TMT6plex) 3 D3Z494 "Aldo-keto reductase family 1, member B10 (aldose reductase) OS=Mus musculus OX=10090 GN=Akr1b10 PE=1 SV=1" D3Z494; G5E895; Q8BIV6 "Aldo-keto reductase family 1, member B10 (aldose reductase) OS=Mus musculus OX=10090 GN=Akr1b10 PE=1 SV=1; Aldo-keto reductase family 1, member B10 (aldose reductase) OS=Mus musculus OX=10090 GN=Akr1b10 PE=1 SV=1; Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b10 PE=2 SV=1" 0 2 2 0.189 0 1 1 1 575.36835 1149.72942 1149.72434 4.41 0.00254 0/0 0 0 11304848 HCD 30 MS2 38.32624 1578.5 110 77.4906 23959 23959 23952 QEplus033719.raw F4 1592.8 1172.2 1671.5 1506.8 1631.3 1896.3 98 2.54 1 FALSE 0.001028 0.01357 0.351 -250 121153 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TANVPQTVPMR [K].tANVPQTVPMR.[L] N-Term(TMT6plex) 6 Q3U046; P46938 WW domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Yap1 PE=2 SV=1;Transcriptional coactivator YAP1 OS=Mus musculus OX=10090 GN=Yap1 PE=1 SV=2 G3UYV4; Q3U046; P46938-2; G3UYA6; P46938; G3UY62 Transcriptional coactivator YAP1 OS=Mus musculus OX=10090 GN=Yap1 PE=1 SV=1; WW domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Yap1 PE=2 SV=1; Isoform 2 of Transcriptional coactivator YAP1 OS=Mus musculus OX=10090 GN=Yap1; Transcriptional coactivator YAP1 OS=Mus musculus OX=10090 GN=Yap1 PE=1 SV=1; Transcriptional coactivator YAP1 OS=Mus musculus OX=10090 GN=Yap1 PE=1 SV=2; Transcriptional coactivator YAP1 OS=Mus musculus OX=10090 GN=Yap1 PE=1 SV=1 0 2 2 0.5806 0 1 1 1 721.90155 1442.79582 1442.7987 -1.99 -0.00144 0/0 0 0 7385664 HCD 30 MS2 73.01632 548.1 110 77.4931 23960 23960 23952 QEplus033719.raw F4 558.7 457.3 601.1 433 622.4 615.9 335 3.1 2 FALSE 1.14E-05 0.0003548 0.751 -250 121158 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQGPQTSAEVYR [K].lQGPQTSAEVYR.[I] N-Term(TMT6plex) 3 Q3ULJ0 Glycerol-3-phosphate dehydrogenase 1-like protein OS=Mus musculus OX=10090 GN=Gpd1l PE=1 SV=2 D3Z0L6; Q3ULJ0-2; Q3ULJ0 Glycerol-3-phosphate dehydrogenase 1-like protein OS=Mus musculus OX=10090 GN=Gpd1l PE=1 SV=1; Isoform 2 of Glycerol-3-phosphate dehydrogenase 1-like protein OS=Mus musculus OX=10090 GN=Gpd1l; Glycerol-3-phosphate dehydrogenase 1-like protein OS=Mus musculus OX=10090 GN=Gpd1l PE=1 SV=2 0 2 2 0.6484 0 1 1 1 789.42749 1577.8477 1577.84849 -0.5 -0.00039 0/0 0 0 2171532.25 HCD 30 MS2 0 315.3 110 77.4957 23961 23961 23952 QEplus033719.raw F4 299.2 276.5 336.1 305.8 329.4 344.8 388 3.64 1 FALSE 1.14E-05 7.75E-06 1.068 -250 121176 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DIAAHIKK [K].dIAAHIkk.[E] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 3 Q9D6F6 Dynein light chain OS=Mus musculus OX=10090 GN=Dynll1 PE=2 SV=1 Q80ZS7; Q9D6F6; P63168 "Dynein light chain OS=Mus musculus OX=10090 GN=BC048507 PE=1 SV=1; Dynein light chain OS=Mus musculus OX=10090 GN=Dynll1 PE=2 SV=1; Dynein light chain 1, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll1 PE=1 SV=1" 1 4 4 0.4897 0 1 1 1 396.51245 1583.02797 1583.02477 2.02 0.0008 0/0 0 0 5035909 HCD 30 MS2 35.84412 608.2 110 77.5052 23964 23964 23963 QEplus033719.raw F4 548.8 521.3 791 421.5 589.2 777.5 112 3.39 1 FALSE 1.14E-05 0.0005948 0.707 -250 121186 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIQDSVPK [K].nIQDSVPk.[A] N-Term(TMT6plex); K8(TMT6plex) 7 E9PUD2 Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1 E9PUD2; Q8K1M6-3; A0A2U3TZ67; Q8K1M6-4; Q8K1M6; Q8K1M6-2; Q3U4P3 Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1; Isoform 3 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=1; Isoform 4 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=2; Isoform 2 of Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l; Dynamin-1-like protein (Fragment) OS=Mus musculus OX=10090 GN=Dnm1l PE=2 SV=1 0 2 2 0.6094 0 1 1 1 679.90656 1358.80583 1358.80439 1.07 0.00072 0/0 0 0 13181447 HCD 30 MS2 54.96699 933.7 110 77.5078 23965 23965 23963 QEplus033719.raw F4 961 783.4 1061.5 810.7 938.5 1047.3 377 2.97 1 FALSE 1.14E-05 0.0004978 0.723 -250 121192 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSLAEK [R].vSLAEk.[V] N-Term(TMT6plex); K6(TMT6plex) 12 Q3UYH9; Q9WUB3 "Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1;Glycogen phosphorylase, muscle form OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=3" Q3UYH9; Q9ET01; E9PUM3; Q3TJQ7; Q3V3U0; Q3UEJ6; Q9WUB3; Q3UZL2; Q3TFQ8; Q91WP9; Q3UGT5; Q8CI94 "Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Glycogen phosphorylase, liver form OS=Mus musculus OX=10090 GN=Pygl PE=1 SV=4; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygl PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygl PE=1 SV=1; Glycogen phosphorylase, muscle form OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=3; Alpha-1,4 glucan phosphorylase (Fragment) OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygl PE=2 SV=1; Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygb PE=2 SV=1; Glycogen phosphorylase, brain form OS=Mus musculus OX=10090 GN=Pygb PE=1 SV=3" 0 2 2 0.2795 0 1 1 1 552.85577 1104.70427 1104.70288 1.26 0.0007 0/0 0 0 42630760 HCD 30 MS2 54.75595 812.5 15.989 77.51 23966 23966 23963 QEplus033719.raw F4 789.2 572.5 790.3 949.6 640.2 1133.3 199 1.61 2 FALSE 0.005324 0.09127 0.031 -250 121202 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EIPVEQK [K].eIPVEQk.[E] N-Term(TMT6plex); K7(TMT6plex) 5 Q9JIK5 Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3 Q8K2L4; Q6PCP0; Q9JIK5; Q3ULC7; Q9CWZ5 RNA helicase (Fragment) OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=1; Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx21 PE=2 SV=2 0 2 2 0.4023 0 1 1 1 650.89801 1300.78874 1300.78767 0.82 0.00054 0/0 0 0 37029572 HCD 30 MS2 37.48027 1227.4 63.1 77.5123 23967 23967 23963 QEplus033719.raw F4 1241.1 1091.7 1404.8 851.7 1472.1 1302.8 321 2.66 1 FALSE 0.0003996 0.007056 0.457 -250 121206 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLVVGQK [R].sLVVGQk.[I] N-Term(TMT6plex); K7(TMT6plex) 1 P21981 Protein-glutamine gamma-glutamyltransferase 2 OS=Mus musculus OX=10090 GN=Tgm2 PE=1 SV=4 P21981 Protein-glutamine gamma-glutamyltransferase 2 OS=Mus musculus OX=10090 GN=Tgm2 PE=1 SV=4 0 2 2 0.2982 0 1 1 1 594.88989 1188.77251 1188.77163 0.74 0.00044 0/0 0 0 28600594 HCD 30 MS2 59.87951 932.1 25.388 77.5146 23968 23968 23963 QEplus033719.raw F4 931.4 751.6 1039.2 959.9 856.2 1054.3 203 2.28 1 FALSE 0.0007056 0.01019 0.401 -250 121216 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MFEDPETTR [K].mFEDPETTR.[Q] N-Term(TMT6plex) 3 Q3UIG0 Eukaryotic translation initiation factor 3 subunit E OS=Mus musculus OX=10090 GN=Eif3e PE=1 SV=1 Q9CT23; Q3UIG0; Q6LCK2 PCI domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3e PE=2 SV=1; Eukaryotic translation initiation factor 3 subunit E OS=Mus musculus OX=10090 GN=Eif3e PE=1 SV=1; Int-6 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif3e PE=2 SV=1 0 2 2 0.7252 0 1 1 1 677.82928 1354.65129 1354.65103 0.19 0.00013 0/0 0 0 22953538 HCD 30 MS2 17.38401 954.2 110 77.5171 23969 23969 23963 QEplus033719.raw F4 998.3 763.5 1063.5 795.2 1007.9 1096.8 79 3.53 1 FALSE 1.14E-05 0.0006173 0.704 -250 121225 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VREMEEEAEK [R].vREMEEEAEk.[L] N-Term(TMT6plex); K10(TMT6plex) 5 Q8CCS6 Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3 Q8CCS6-2; Q8CCS6; D3YUB9; D3Z5F7; G3UY42 Isoform 2 of Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1; Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=3; Polyadenylate-binding protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=2; Predicted gene 20521 OS=Mus musculus OX=10090 GN=Gm20521 PE=3 SV=1; Polyadenylate-binding protein 2 OS=Mus musculus OX=10090 GN=Pabpn1 PE=1 SV=1 1 3 3 0.5158 0 1 1 1 569.9707 1707.89756 1707.89876 -0.7 -0.0004 0/0 0 0 13770522 HCD 30 MS2 3.289711 1168.2 110 77.5196 23970 23970 23963 QEplus033719.raw F4 1215.6 1046.2 1214.4 817 1469.1 1247.1 321 4.44 1 FALSE 1.14E-05 1.50E-07 1.394 -250 121249 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQEPSAAIPK [K].aQEPSAAIPk.[V] N-Term(TMT6plex); K10(TMT6plex) 3 Q8K4Z5 Splicing factor 3A subunit 1 OS=Mus musculus OX=10090 GN=Sf3a1 PE=1 SV=1 Q3TVM1; Q8K4Z5; Q8BKK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Sf3a1 PE=2 SV=1; Splicing factor 3A subunit 1 OS=Mus musculus OX=10090 GN=Sf3a1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1 0 2 2 0.7289 0 1 1 1 735.44019 1469.87309 1469.8728 0.2 0.00015 0/0 0 0 9972111 HCD 30 MS2 35.21053 498.7 110 77.5271 23973 23973 23963 QEplus033719.raw F4 408.5 638 464.5 420 651.5 409.8 307 3.32 1 FALSE 1.14E-05 1.32E-07 1.404 -250 121257 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSGTAEVELK [K].gSGTAEVELk.[K] N-Term(TMT6plex); K10(TMT6plex) 7 P52480; P52480-2 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4;Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm P52480; A0A1L1SU37; A0A1L1SSN6; A0A1L1SUV0; A0A1L1SQV8; P52480-2; A0A1L1STV8 Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=4; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1; Isoform M1 of Pyruvate kinase PKM OS=Mus musculus OX=10090 GN=Pkm; Pyruvate kinase (Fragment) OS=Mus musculus OX=10090 GN=Pkm PE=1 SV=1 0 2 2 0.4945 0 1 1 1 724.92297 1448.83867 1448.83608 1.79 0.0013 0/0 0 0 14639276 HCD 30 MS2 4.511424 677.2 110 77.5344 23975 23975 23974 QEplus033719.raw F4 684.9 551 708.2 612.8 790.2 716 458 3.64 2 FALSE 1.14E-05 3.04E-08 1.525 -250 121264 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLVNDAQK [R].vLVNDAQk.[V] N-Term(TMT6plex); K8(TMT6plex) 3 Q5EBP9 Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 Q62318-2; Q5EBP9; Q3UDN8 Isoform 2 of Transcription intermediary factor 1-beta OS=Mus musculus OX=10090 GN=Trim28; Tripartite motif-containing 28 OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Trim28 PE=2 SV=1 0 3 3 0.3566 0 1 1 1 448.94711 1344.82679 1344.82512 1.24 0.00055 0/0 0 0 12948980 HCD 30 MS2 42.95261 810.9 81.454 77.5367 23976 23976 23974 QEplus033719.raw F4 1002.5 662.7 813.5 633.5 943.4 809.7 468 2.86 1 FALSE 0.0002909 0.00595 0.48 -250 121272 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQLEACETR [R].lQLEAcETR.[T] N-Term(TMT6plex); C6(Carbamidomethyl) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.3697 0 1 1 1 674.85852 1348.70976 1348.70922 0.41 0.00027 0/0 0 0 23094422 HCD 30 MS2 12.01156 1004.1 110 77.5415 23978 23978 23974 QEplus033719.raw F4 1003.4 912.6 1145.3 821.8 1062.6 1079.1 238 3.3 2 FALSE 1.14E-05 5.45E-05 0.907 -250 121280 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASGVEGADVVK [K].aSGVEGADVVk.[L] N-Term(TMT6plex); K11(TMT6plex) 10 G3UVV4 Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1 Q3UE51; G3UVV4; Q3TJE3; P17710; P17710-2; P17710-4; Q6GQU1; D3YYR4; Q3UPC4; D3Z365 Hexokinase (Fragment) OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=3; Isoform HK1-SB of Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1; Isoform HK1-SC of Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Phosphotransferase (Fragment) OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Phosphotransferase (Fragment) OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1 0 3 3 0.6209 0 1 1 1 497.29242 1489.86271 1489.86263 0.05 0.00003 0/0 0 0 13625057 HCD 30 MS2 45.75291 1051.9 86.396 77.5437 23979 23979 23974 QEplus033719.raw F4 1254 756.4 1000.6 970.5 1231.2 1099 468 3.35 1 FALSE 1.14E-05 1.33E-07 1.404 -250 121287 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQFEQK [R].mQFEQk.[E] N-Term(TMT6plex); K6(TMT6plex) 8 A0A0G2JEX1 Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1 A0A0G2JEX1; Q7TPW1; G4W8R3; A0A0G2JG59; G4W8R2; G4W8R4; A0A0G2JFD8; A0A0G2JGI1 Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=3; Nexilin beta OS=Mus musculus OX=10090 GN=Nexn PE=2 SV=1; Nexilin (Fragment) OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin alpha OS=Mus musculus OX=10090 GN=Nexn PE=2 SV=1; Nexilin gamma OS=Mus musculus OX=10090 GN=Nexn PE=2 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1; Nexilin OS=Mus musculus OX=10090 GN=Nexn PE=1 SV=1 0 2 2 0.2695 0 1 1 1 634.85748 1268.70769 1268.70731 0.3 0.00019 0/0 0 0 12509338 HCD 30 MS2 28.56666 1212 110 77.5462 23980 23980 23974 QEplus033719.raw F4 1170.3 794.7 1443 1141 1046 1677 257 2.56 1 FALSE 0.003101 0.06041 0.113 -250 121311 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CVIMCQGSK [R].cVIMcQGSk.[K] N-Term(TMT6plex); C1(Carbamidomethyl); C5(Carbamidomethyl); K9(TMT6plex) 1 Q6P4T2 U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Mus musculus OX=10090 GN=Snrnp200 PE=1 SV=1 Q6P4T2 U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Mus musculus OX=10090 GN=Snrnp200 PE=1 SV=1 0 2 2 0.6846 0 1 1 1 770.90674 1540.8062 1540.805 0.78 0.0006 0/0 0 0 3837768.5 HCD 30 MS2 27.65015 417.9 110 77.5538 23983 23983 23974 QEplus033719.raw F4 412.1 380.4 481.8 299.3 460.1 473.9 265 3.71 1 FALSE 1.14E-05 1.15E-06 1.226 -250 121319 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GQESIEPVPGQK [K].gQESIEPVPGQk.[G] N-Term(TMT6plex); K12(TMT6plex) 6 A4FUS0 Eif2b3 protein OS=Mus musculus OX=10090 GN=Eif2b3 PE=2 SV=1 A4FUS0; B1AUN2; Q3UKV0; B1AUN3; A0AUM9; Q3T9T4 "Eif2b3 protein OS=Mus musculus OX=10090 GN=Eif2b3 PE=2 SV=1; Eukaryotic translation initiation factor 2B, subunit 3 OS=Mus musculus OX=10090 GN=Eif2b3 PE=1 SV=1; Eukaryotic translation initiation factor 2B, subunit 3 OS=Mus musculus OX=10090 GN=Eif2b3 PE=1 SV=1; Eukaryotic translation initiation factor 2B, subunit 3 OS=Mus musculus OX=10090 GN=Eif2b3 PE=1 SV=1; Eif2b3 protein OS=Mus musculus OX=10090 GN=Eif2b3 PE=2 SV=2; NTP_transferase domain-containing protein OS=Mus musculus OX=10090 GN=Eif2b3 PE=2 SV=1" 0 2 2 0.6985 0 1 1 1 863.992 1726.97673 1726.97397 1.6 0.00138 0/0 0 0 1984088.75 HCD 30 MS2 0 180.9 110 77.5563 23984 23984 23974 QEplus033719.raw F4 185 142.6 186.4 163.3 203.5 204.3 413 3.88 1 FALSE 1.14E-05 1.49E-09 1.774 -250 121333 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTEAATTAGKPEPNAVTK [K].kTEAATTAGkPEPNAVTk.[A] N-Term(TMT6plex); K1(TMT6plex); K10(TMT6plex); K18(TMT6plex) 4 P27546; A0A0G2JFH2 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3;Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 P27546; A0A0G2JFH2; P27546-2; A0A140T8T5 Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=3; Microtubule-associated protein (Fragment) OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1; Isoform 2 of Microtubule-associated protein 4 OS=Mus musculus OX=10090 GN=Map4; Microtubule-associated protein OS=Mus musculus OX=10090 GN=Map4 PE=1 SV=1 1 4 4 0.7664 0 1 1 1 683.41003 2730.61831 2730.61715 0.43 0.00029 0/0 0 0 17193716 HCD 30 MS2 30.29781 721.7 110 77.5662 23987 23987 23985 QEplus033719.raw F4 775.4 600 851.1 501.5 849 753.2 224 5.35 2 FALSE 1.14E-05 5.15E-13 2.432 -250 121339 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQQLEQIRK [R].aQQLEQIRk.[D] N-Term(TMT6plex); K9(TMT6plex) 1 Q9JHU9 Inositol-3-phosphate synthase 1 OS=Mus musculus OX=10090 GN=Isyna1 PE=1 SV=1 Q9JHU9 Inositol-3-phosphate synthase 1 OS=Mus musculus OX=10090 GN=Isyna1 PE=1 SV=1 1 3 3 0.5174 0 1 1 1 524.65979 1571.96482 1571.96335 0.94 0.00049 0/0 0 0 25899234 HCD 30 MS2 59.2388 966.7 37.511 77.5684 23988 23988 23985 QEplus033719.raw F4 951.5 827.5 1011 1034.8 807.4 1167.7 386 2.3 1 FALSE 9.73E-05 0.002933 0.56 -250 121342 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ASGVEGADVVK [K].aSGVEGADVVk.[L] N-Term(TMT6plex); K11(TMT6plex) 10 G3UVV4 Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1 Q3UE51; G3UVV4; Q3TJE3; P17710; P17710-2; P17710-4; Q6GQU1; D3YYR4; Q3UPC4; D3Z365 Hexokinase (Fragment) OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=3; Isoform HK1-SB of Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1; Isoform HK1-SC of Hexokinase-1 OS=Mus musculus OX=10090 GN=Hk1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Phosphotransferase (Fragment) OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1; Hexokinase OS=Mus musculus OX=10090 GN=Hk1 PE=2 SV=1; Phosphotransferase (Fragment) OS=Mus musculus OX=10090 GN=Hk1 PE=1 SV=1 0 2 2 0.6189 0 1 1 1 745.43518 1489.86308 1489.86263 0.31 0.00023 0/0 0 0 23772276 HCD 30 MS2 6.718041 754.5 110 77.5709 23989 23989 23985 QEplus033719.raw F4 785.7 626.8 823.9 737.6 694.6 858.3 481 3.91 1 FALSE 1.14E-05 3.62E-10 1.891 -250 121362 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGNLSWLR [K].rGNLSWLR.[E] N-Term(TMT6plex) 2 A0A494BA97 Osteoclast-stimulating factor 1 OS=Mus musculus OX=10090 GN=Ostf1 PE=1 SV=1 A0A494BA97; Q62422 Osteoclast-stimulating factor 1 OS=Mus musculus OX=10090 GN=Ostf1 PE=1 SV=1; Osteoclast-stimulating factor 1 OS=Mus musculus OX=10090 GN=Ostf1 PE=1 SV=2 1 3 3 0.3892 0 1 1 1 410.91656 1230.73514 1230.72686 6.73 0.00276 0/0 0 0 7820976.5 HCD 30 MS2 67.17044 333.3 101.436 77.5756 23991 23991 23985 QEplus033719.raw F4 328.6 292.7 357.4 275.7 381.5 363.8 376 3.34 1 FALSE 1.14E-05 0.0003408 0.755 -250 121371 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RIVEQDTMPPK [R].rIVEQDTMPPk.[G] N-Term(TMT6plex); K11(TMT6plex) 6 B9EKE9 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1 B9EKE9; B7ZWF1; Q62095; Q3TQX5; P16381; Q3U484 RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=2 SV=1; ATP-dependent RNA helicase DDX3Y OS=Mus musculus OX=10090 GN=Ddx3y PE=1 SV=2; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=1; Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus OX=10090 GN=D1Pas1 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx3y PE=2 SV=1 1 3 3 0.5956 0 1 1 1 591.34552 1772.02201 1772.01406 4.48 0.00265 0/0 0 0 7119848.5 HCD 30 MS2 47.07006 831.5 110 77.578 23992 23992 23985 QEplus033719.raw F4 866.1 695.2 978.5 756.6 768 924.4 433 3.61 1 FALSE 1.14E-05 0.0002164 0.793 -250 121392 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIVVYTGDR [R].gIVVYTGDR.[T] N-Term(TMT6plex) 2 Q8VDN2 Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1 Q3TXF9; Q8VDN2 Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1 0 2 2 0.4986 0 1 1 1 604.84564 1208.68401 1208.68365 0.29 0.00018 0/0 0 0 38657624 HCD 30 MS2 29.603 883.3 47.585 77.5853 23995 23995 23985 QEplus033719.raw F4 835.6 792.4 1039 734.2 891.1 1007.3 297 3.47 1 FALSE 1.14E-05 1.62E-06 1.198 -250 121402 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLQLAIR [R].hLQLAIR.[NG] N-Term(TMT6plex) 17 Q149V4; Q8BFU2; Q3THW5; P27661 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1;Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3;Histone H2A.V OS=Mus musculus OX=10090 GN=H2az2 PE=1 SV=3;Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 Q149V4; Q8BFU2; Q3THW5; C0HKE5; P0C0S6; Q8CGP5; A0AUV1; Q8CGP4; Q3TFU6; Q8R1M2; Q8R029; P27661; A0A0N4SV66; Q64426; Q8CGP7; Q8CGP6; Q6GSS7 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1; Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3; Histone H2A.V OS=Mus musculus OX=10090 GN=H2az2 PE=1 SV=3; Histone H2A type 1-G OS=Mus musculus OX=10090 GN=H2ac11 PE=1 SV=1; Histone H2A.Z OS=Mus musculus OX=10090 GN=H2az1 PE=1 SV=2; Histone H2A type 1-F OS=Mus musculus OX=10090 GN=Hist1h2af PE=1 SV=3; Histone H2A (Fragment) OS=Mus musculus OX=10090 GN=H2ac12 PE=2 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2ac1 PE=1 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2az1 PE=2 SV=1; Histone H2A.J OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2az2 PE=2 SV=1; Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2; Histone H2A OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A (Fragment) OS=Mus musculus domesticus OX=10092 GN=H2A PE=2 SV=1; Histone H2A type 1-K OS=Mus musculus OX=10090 GN=H2ac15 PE=1 SV=3; Histone H2A type 1-H OS=Mus musculus OX=10090 GN=H2ac12 PE=1 SV=3; Histone H2A type 2-A OS=Mus musculus OX=10090 GN=Hist2h2aa1 PE=1 SV=3 0 3 3 0.2136 0 1 1 1 360.56781 1079.68888 1079.68868 0.18 0.00007 0/0 0 0 8714049 HCD 30 MS2 15.19405 197.4 110 77.5926 23997 23997 23996 QEplus033719.raw F4 191.6 167.2 223.3 149.9 221.3 231.2 16 3.23 4 FALSE 0.0001603 0.003524 0.541 -250 121438 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CQYLQAEKK [R].cQYLQAEkk.[K] N-Term(TMT6plex); C1(Carbamidomethyl); K8(TMT6plex); K9(TMT6plex) 3 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 A2VCK0; Q8VDD5; A0A2R8VKI5 Myh9 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-9 (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=1 1 3 3 0.5674 0 1 1 1 619.02954 1855.07407 1855.07147 1.4 0.00087 0/0 0 0 12200672 HCD 30 MS2 23.6692 1642.1 98.498 77.6043 24002 24002 23996 QEplus033719.raw F4 1594.4 1572.3 1973 1300.9 1702.1 1709.6 338 2.82 1 FALSE 1.14E-05 1.02E-05 1.046 -250 121454 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELAVETK [K].eLAVETk.[N] N-Term(TMT6plex); K7(TMT6plex) 1 P46460 Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Nsf PE=1 SV=2 P46460 Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Nsf PE=1 SV=2 0 2 2 0.3784 0 1 1 1 624.38403 1247.76079 1247.76112 -0.27 -0.00017 0/0 0 0 16066642 HCD 30 MS2 52.55667 1350.9 97.314 77.6091 24004 24004 23996 QEplus033719.raw F4 1273.7 1348.6 1517.2 945.9 1735.4 1284.7 373 2.96 1 FALSE 0.0001707 0.003886 0.53 -250 121458 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILRGPDGLSR [R].iLRGPDGLSR.[G] N-Term(TMT6plex) 20 S4R2U7; P28659 CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2 PE=1 SV=1;CUGBP Elav-like family member 1 OS=Mus musculus OX=10090 GN=Celf1 PE=1 SV=2 S4R2U7; E9QA47; Q9Z0H4; P28659-2; Q9Z0H4-7; Q9Z0H4-11; Q9Z0H4-9; A0A0R4J2B0; P28659; Q9Z0H4-4; Q9Z0H4-8; P28659-3; P28659-4; S4R1S7; A0A0R4J0T5; Q9Z0H4-6; Q9Z0H4-2; V9GX43; Q9Z0H4-5; S4R2S7 CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2 PE=1 SV=1; CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2 PE=1 SV=1; CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2 PE=1 SV=1; Isoform 2 of CUGBP Elav-like family member 1 OS=Mus musculus OX=10090 GN=Celf1; Isoform 7 of CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2; Isoform 11 of CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2; Isoform 9 of CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2; CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2 PE=1 SV=1; CUGBP Elav-like family member 1 OS=Mus musculus OX=10090 GN=Celf1 PE=1 SV=2; Isoform 4 of CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2; Isoform 8 of CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2; Isoform 3 of CUGBP Elav-like family member 1 OS=Mus musculus OX=10090 GN=Celf1; Isoform 4 of CUGBP Elav-like family member 1 OS=Mus musculus OX=10090 GN=Celf1; CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2 PE=1 SV=1; CUGBP Elav-like family member 1 OS=Mus musculus OX=10090 GN=Celf1 PE=1 SV=1; Isoform 6 of CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2; Isoform 2 of CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2; CUGBP Elav-like family member 2 (Fragment) OS=Mus musculus OX=10090 GN=Celf2 PE=1 SV=1; Isoform 5 of CUGBP Elav-like family member 2 OS=Mus musculus OX=10090 GN=Celf2; CUGBP Elav-like family member 2 (Fragment) OS=Mus musculus OX=10090 GN=Celf2 PE=1 SV=8 1 3 3 0.6222 0 1 1 1 438.26871 1312.79157 1312.78985 1.31 0.00057 0/0 0 0 9740813 HCD 30 MS2 28.77007 827.3 110 77.6116 24005 24005 23996 QEplus033719.raw F4 911.6 584.8 885.1 709.9 811.9 1060.3 303 3.6 2 FALSE 1.14E-05 0.0001902 0.804 -250 121466 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIADNVK [K].vIADNVk.[D] N-Term(TMT6plex); K7(TMT6plex) 3 P17751 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5 H7BXC3; P17751; P17751-2 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=1; Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5; Isoform 2 of Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 0 3 3 0.1806 0 1 1 1 406.26022 1216.76612 1216.76654 -0.35 -0.00014 0/0 0 0 7406713.5 HCD 30 MS2 45.25497 727.7 110 77.6141 24006 24006 23996 QEplus033719.raw F4 855.5 556.6 724.6 659.8 747.1 822.4 483 2.27 1 FALSE 0.005197 0.0889 0.037 -250 121473 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLPFQR [R].kLPFQR.[L] N-Term(TMT6plex); K1(TMT6plex) 9 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; E0CZ27; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 1 3 3 0.1337 0 1 1 1 416.27307 1246.80466 1246.8036 0.85 0.00035 0/0 0 0 116931232 HCD 30 MS2 8.100811 567 8.8 77.6213 24008 24008 24007 QEplus033719.raw F4 480.9 631 644.5 337.2 841.8 466.7 220 2.02 2 FALSE 0.002123 0.03945 0.176 -250 121483 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FSTPEQAAK [R].fSTPEQAAk.[N] N-Term(TMT6plex); K9(TMT6plex) 4 G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 Q8R081; G3UY38; Q3UMT7; G5E924 Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 0 2 2 0.5723 0 1 1 1 718.91138 1436.81548 1436.81495 0.37 0.00026 0/0 0 0 21457968 HCD 30 MS2 7.585681 803.6 110 77.6239 24009 24009 24007 QEplus033719.raw F4 820.9 723.7 900.4 622.9 922.8 830.9 461 3.39 1 FALSE 1.14E-05 0.0007793 0.684 -250 121492 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIADNVK [K].vIADNVk.[D] N-Term(TMT6plex); K7(TMT6plex) 3 P17751 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5 H7BXC3; P17751; P17751-2 Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=1; Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 PE=1 SV=5; Isoform 2 of Triosephosphate isomerase OS=Mus musculus OX=10090 GN=Tpi1 0 2 2 0.3031 0 1 1 1 608.88727 1216.76726 1216.76654 0.59 0.00036 0/0 0 0 91804800 HCD 30 MS2 14.8029 1300.4 20.291 77.6262 24010 24010 24007 QEplus033719.raw F4 1512.2 953.4 1280.8 1402.6 1190.7 1462.9 446 2.87 1 FALSE 0.000565 0.008691 0.427 -250 121502 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFYEQMNGPVTSGSR [R].rFYEQMNGPVTSGSR.[Q] N-Term(TMT6plex) 14 Q91VK2; Q80T06 Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1;Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1 Q8BW50; Q91VK2; P57776-2; D3Z7N2; F6ZFU0; Q80T06; A0A0R4J1E2; D3YY68; E9QN08; A0A0R4J1L2; D3YZT9; P57776-3; P57776; D3YUQ9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Eef1d PE=2 SV=1; Eef1d protein OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 2 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=1; Isoform 3 of Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d; Elongation factor 1-delta OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=3; Elongation factor 1-delta (Fragment) OS=Mus musculus OX=10090 GN=Eef1d PE=1 SV=8 1 3 3 0.775 0 1 1 1 653.32959 1957.97422 1957.97516 -0.48 -0.00031 0/0 0 0 17151432 HCD 30 MS2 11.06592 369.4 74.956 77.6284 24011 24011 24007 QEplus033719.raw F4 355 276 407.8 348.9 377.4 451.4 201 6.8 2 FALSE 1.14E-05 6.31E-16 3.305 -250 121510 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGISAPK [K].vGISAPk.[L] N-Term(TMT6plex); K7(TMT6plex) 5 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 A0PJF4; Q6UL10; E9Q616; Q8VDN3; Q8BKS2 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=2 0 3 3 0.2335 0 1 1 1 377.2504 1129.73664 1129.73452 1.88 0.00071 0/0 0 0 13648753 HCD 30 MS2 32.36176 772.5 103.268 77.6308 24012 24012 24007 QEplus033719.raw F4 781.7 615.6 819.3 755 712.6 950.8 191 2.57 1 FALSE 0.002275 0.04472 0.158 -250 121520 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YRVTYSSPEDGIR [R].yRVTYSSPEDGIR.[E] N-Term(TMT6plex) 10 P11276; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 A0A087WS56; P11276; Q3UHL6; Q3UHR1; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; Q9Z1Z8; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 1 3 3 0.6154 0 1 1 1 591.31366 1771.92643 1771.91763 4.96 0.00293 0/0 0 0 8278519 HCD 30 MS2 54.35353 1165.2 82.892 77.6331 24013 24013 24007 QEplus033719.raw F4 1224.3 1056.7 1423.9 1098.5 1002 1185.7 277 4.42 2 FALSE 1.14E-05 7.14E-09 1.645 -250 121536 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YMAEVK [K].yMAEVk.[K] N-Term(TMT6plex); K6(TMT6plex) 1 Q9D735 Telomerase RNA component interacting RNase OS=Mus musculus OX=10090 GN=Trir PE=1 SV=1 Q9D735 Telomerase RNA component interacting RNase OS=Mus musculus OX=10090 GN=Trir PE=1 SV=1 0 2 2 0.213 0 1 1 1 599.84937 1198.69145 1198.6906 0.71 0.00043 0/0 0 0 5873507 HCD 30 MS2 42.30383 1005.9 110 77.6406 24016 24016 24007 QEplus033719.raw F4 1010.7 917.5 1030.7 735.2 1367.6 974 219 2.16 1 FALSE 0.003058 0.05953 0.115 -250 121544 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NADEVELK [K].nADEVELk.[M] N-Term(TMT6plex); K8(TMT6plex) 6 Q60847 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3 Q60847; Q60847-3; E9PX70; Q60847-5; Q60847-4; Q60847-2 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3; Isoform 3 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1; Isoform 5 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 4 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 2 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 0 2 2 0.3466 0 1 1 1 688.39587 1375.78447 1375.78332 0.84 0.00058 0/0 0 0 4767577 HCD 30 MS2 0 790.6 110 77.6431 24017 24017 24007 QEplus033719.raw F4 756 685 730.9 433.6 1466.5 671.6 488 2.77 1 FALSE 1.14E-05 0.0002575 0.778 -250 121549 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HFELGGDK [K].hFELGGDk.[K] N-Term(TMT6plex); K8(TMT6plex) 2 Q5M9P1 Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1 A0A2I3BPG9; Q5M9P1 "Ribosomal protein L36A, pseudogene 1 OS=Mus musculus OX=10090 GN=Rpl36a-ps1 PE=3 SV=1; Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1" 0 3 3 0.5374 0 1 1 1 454.25943 1360.76374 1360.76252 0.89 0.00041 0/0 0 0 18590430 HCD 30 MS2 27.58835 779 85.158 77.6504 24019 24019 24018 QEplus033719.raw F4 775.8 584 819.4 576 912.6 1006.4 378 3.61 1 FALSE 1.14E-05 2.03E-07 1.369 -250 121553 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTRDETNYGIPQR [K].lTRDETNYGIPQR.[A] N-Term(TMT6plex) 1 P68040 Receptor of activated protein C kinase 1 OS=Mus musculus OX=10090 GN=Rack1 PE=1 SV=3 P68040 Receptor of activated protein C kinase 1 OS=Mus musculus OX=10090 GN=Rack1 PE=1 SV=3 1 2 2 0.6067 0 1 1 1 896.48132 1791.95537 1791.95508 0.16 0.00015 0/0 0 0 4997708.5 HCD 30 MS2 0 92 110 77.653 24020 24020 24018 QEplus033719.raw F4 87 82.8 99.1 80.8 95.8 106.6 405 3 1 FALSE 1.14E-05 5.04E-08 1.484 -250 121559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TATQLAVNK [R].tATQLAVNk.[I] N-Term(TMT6plex); K9(TMT6plex) 7 Q8C5Q5 T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1 Q3TET0; Q3UDB1; Q3UIJ0; Q8C5Q5; Q3TJN2; Q3THH8; P80313 T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta (Fragment) OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=2 SV=1; T-complex protein 1 subunit eta OS=Mus musculus OX=10090 GN=Cct7 PE=1 SV=1 0 2 2 0.5777 0 1 1 1 702.43494 1403.8626 1403.86224 0.26 0.00018 0/0 0 0 50654852 HCD 30 MS2 11.32925 844.5 44.525 77.6552 24021 24021 24018 QEplus033719.raw F4 919.8 704.3 952.7 664.9 878.1 946.9 320 3.86 1 FALSE 1.14E-05 2.94E-06 1.148 -250 121567 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPQIQVYSR [-K].tPQIQVYSR.[H] N-Term(TMT6plex) 5 Q91Z72 Beta-2-microglobulin (Fragment) OS=Mus musculus molossinus OX=57486 PE=4 SV=1 Q91Z72; Q91Z73; Q3U679; P01887; Q9D239 Beta-2-microglobulin (Fragment) OS=Mus musculus molossinus OX=57486 PE=4 SV=1; Beta-2-microglobulin (Fragment) OS=Mus musculus musculus OX=39442 PE=4 SV=1; Beta-2-microglobulin OS=Mus musculus OX=10090 GN=B2m PE=2 SV=1; Beta-2-microglobulin OS=Mus musculus OX=10090 GN=B2m PE=1 SV=2; Beta-2-microglobulin OS=Mus musculus OX=10090 GN=B2m PE=2 SV=1 0 2 2 0.1813 0 1 1 1 660.87823 1320.74919 1320.74732 1.42 0.00094 0/0 0 0 22281490 HCD 30 MS2 50.28278 927.6 73.738 77.6575 24022 24022 24018 QEplus033719.raw F4 937 721.4 1094.4 861.9 851.7 1099.4 531 1.93 1 FALSE 0.001744 0.02965 0.218 -250 121575 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETPQNATPNESLAASSQK [K].eTPQNATPNESLAASSQk.[R] N-Term(TMT6plex); K18(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 3 3 0.7773 0 1 1 1 777.745 2331.22043 2331.21924 0.51 0.0004 0/0 0 0 16495235 HCD 30 MS2 0 288.4 110 77.66 24023 24023 24018 QEplus033719.raw F4 351.7 73.3 289.7 402.8 74.3 538.4 387 7.32 1 FALSE 1.14E-05 1.94E-12 2.322 -250 121581 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALIVEPSR [K].aLIVEPSR.[E] N-Term(TMT6plex) 3 Q91VR5 ATP-dependent RNA helicase DDX1 OS=Mus musculus OX=10090 GN=Ddx1 PE=1 SV=1 Q91VR5; Q3V1Z7; Q922B8 ATP-dependent RNA helicase DDX1 OS=Mus musculus OX=10090 GN=Ddx1 PE=1 SV=1; ATP-dependent RNA helicase DDX1 OS=Mus musculus OX=10090 GN=Ddx1 PE=2 SV=1; ATP-dependent RNA helicase DDX1 OS=Mus musculus OX=10090 GN=Ddx1 PE=2 SV=1 0 2 2 0.5391 0 1 1 1 557.34589 1113.6845 1113.68292 1.41 0.00079 0/0 0 0 20085200 HCD 30 MS2 13.39875 814.5 85.524 77.6623 24024 24024 24018 QEplus033719.raw F4 794.8 631.6 829.8 667.6 886.9 1076.2 159 2.56 1 FALSE 1.14E-05 0.0001984 0.8 -250 121589 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEELEEAKK [R].tEELEEAkk.[K] N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex) 14 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; B2RWX0; B2RQQ1; I6L963; B1AR69; B2RY26; A2AQP0; B2RXX9; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-7B OS=Mus musculus OX=10090 GN=Myh7b PE=3 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 3 3 0.4158 0 1 1 1 588.68372 1764.03659 1764.03579 0.46 0.00027 0/0 0 0 19412514 HCD 30 MS2 57.15236 1340.3 51.5 77.6645 24025 24025 24018 QEplus033719.raw F4 1630.6 692.1 1044.4 1956.9 1042.8 1674.7 434 2.02 5 FALSE 1.14E-05 4.08E-05 0.931 -250 121601 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NADEVELK [K].nADEVELk.[M] N-Term(TMT6plex); K8(TMT6plex) 6 Q60847 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3 Q60847; Q60847-3; E9PX70; Q60847-5; Q60847-4; Q60847-2 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3; Isoform 3 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1; Isoform 5 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 4 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 2 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 0 2 2 0.4042 0 1 1 1 688.3913 1375.77532 1375.78332 -5.81 -0.004 0/0 0 0 8033936.5 HCD 30 MS2 0 848.2 110 77.6693 24027 24027 24018 QEplus033719.raw F4 817.3 713.3 775.7 436.6 1660.6 685.7 404 2.87 1 FALSE 1.14E-05 0.0005294 0.717 -250 121608 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous INQQLDTK [R].iNQQLDTk.[QL] N-Term(TMT6plex); K8(TMT6plex) 11 Q5SX40; P13541; Q5SX39; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; Q5DTH2; Q3UUB1; Q8BLW0; I6L963; B1AR69; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; MKIAA4211 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.6746 0 1 1 1 709.42462 1417.84197 1417.8415 0.33 0.00023 0/0 0 0 40487196 HCD 30 MS2 8.218729 663.1 41.451 77.6791 24030 24030 24029 QEplus033719.raw F4 728.6 84.6 423.5 1506.7 83.7 1151.7 487 3.35 4 FALSE 1.14E-05 0.0001496 0.824 -250 121615 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLGPGMTK [K].nLGPGMTk.[M] N-Term(TMT6plex); K8(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 2 2 0.3606 0 1 1 1 638.37903 1275.75078 1275.74951 0.99 0.00063 0/0 0 0 36000512 HCD 30 MS2 15.97504 989 39.983 77.6814 24031 24031 24029 QEplus033719.raw F4 996.4 769.4 1102.5 792.8 1120.9 1151.7 487 2.69 1 FALSE 0.002106 0.03925 0.177 -250 121620 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRDVSAYSK [K].lRDVSAYSk.[Y] N-Term(TMT6plex); K9(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.5443 0 1 1 1 499.63297 1496.88434 1496.8837 0.43 0.00021 0/0 0 0 123065872 HCD 30 MS2 18.2163 883.2 12.344 77.6837 24032 24032 24029 QEplus033719.raw F4 763.9 869.5 1021.9 761.7 954.2 928.2 343 4.06 2 FALSE 1.14E-05 1.65E-07 1.386 -250 121624 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FTFSGR [K].fTFSGR.[E] N-Term(TMT6plex) 6 E9Q616; Q6UIL4 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1;AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1 A0PJF4; E9Q616; Q6UIL4; Q8CGE7; Q8VDN3; Q8BKS2 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=2 0 2 2 0.3825 0 1 1 1 472.26364 943.52001 943.51988 0.13 0.00006 0/0 0 0 32941884 HCD 30 MS2 17.19938 906.9 41.794 77.6859 24033 24033 24029 QEplus033719.raw F4 830.9 949.8 1052.4 656.2 986.8 965.1 61 2.17 2 FALSE 0.003953 0.07369 0.078 -250 121637 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SENEEFVEVGR [R].sENEEFVEVGR.[L] N-Term(TMT6plex) 4 Q3TYK4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1 Q8C3Z4; Q3TYK4; Q3UBA7; Q9DBC7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1; cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Mus musculus OX=10090 GN=Prkar1a PE=1 SV=3 0 2 2 0.5599 0 1 1 1 762.38092 1523.75456 1523.75392 0.42 0.00032 0/0 0 0 19417320 HCD 30 MS2 0 570.3 110 77.6907 24035 24035 24029 QEplus033719.raw F4 573.7 422.2 664.1 535.6 498.9 727.4 143 3.59 1 FALSE 1.14E-05 4.22E-08 1.498 -250 121643 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESEPQAAADATEVK [K].eSEPQAAADATEVk.[E] N-Term(TMT6plex); K14(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 0 3 3 0.7873 0 1 1 1 635.33661 1903.99527 1904.00131 -3.17 -0.00201 0/0 0 0 10801653 HCD 30 MS2 20.10893 882.1 110 77.6932 24036 24036 24029 QEplus033719.raw F4 794.2 762.7 1017.2 753.7 917.5 1047 351 5.36 1 FALSE 1.14E-05 3.55E-11 2.082 -250 121649 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLRVDIAEGR [R].sLRVDIAEGR.[K] N-Term(TMT6plex) 4 Q80U88 Eukaryotic translation initiation factor 4H (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0038 PE=4 SV=3 Q80U88; Q9WUK2-2; Q3V244; Q9WUK2 Eukaryotic translation initiation factor 4H (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0038 PE=4 SV=3; Isoform Short of Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h; Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h PE=2 SV=1; Eukaryotic translation initiation factor 4H OS=Mus musculus OX=10090 GN=Eif4h PE=1 SV=3 1 3 3 0.1176 0 1 1 1 448.92819 1344.77002 1344.77968 -7.18 -0.00322 0/0 0 0 12918666 HCD 30 MS2 56.34436 697.3 48.891 77.6955 24037 24037 24029 QEplus033719.raw F4 698.6 589.7 805.9 647.8 675.7 766.3 350 2.04 1 FALSE 0.002981 0.05796 0.12 -250 121656 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLVAQHDAYK [K].vLVAQHDAYk.[G] N-Term(TMT6plex); K10(TMT6plex) 1 Q99LC5 "Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Etfa PE=1 SV=2" Q99LC5 "Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Etfa PE=1 SV=2" 0 3 3 0.3351 0 1 1 1 534.65082 1601.9379 1601.94155 -2.28 -0.00122 0/0 0 0 10631803 HCD 30 MS2 16.34154 1053.3 110 77.698 24038 24038 24029 QEplus033719.raw F4 980 971.6 1210.8 951.3 995.3 1210.8 450 3.85 1 FALSE 1.14E-05 6.15E-06 1.087 -250 121674 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDSTEPPYSQK [K].mDSTEPPYSQk.[R] N-Term(TMT6plex); K11(TMT6plex) 6 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 0 4 4 0.6628 0 1 1 1 435.97787 1740.88967 1740.88786 1.04 0.00045 0/0 0 0 4032018.25 HCD 30 MS2 33.92072 542.1 110 77.7077 24041 24041 24040 QEplus033719.raw F4 583.8 418.7 581.9 457.1 637.6 573.5 251 3.44 1 FALSE 1.14E-05 0.0005072 0.721 -250 121697 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLPDLQR [K].gLPDLQR.[V] N-Term(TMT6plex) 1 Q9D2R0 Acetoacetyl-CoA synthetase OS=Mus musculus OX=10090 GN=Aacs PE=1 SV=1 Q9D2R0 Acetoacetyl-CoA synthetase OS=Mus musculus OX=10090 GN=Aacs PE=1 SV=1 0 2 2 0.1905 0 1 1 1 514.30933 1027.61138 1027.60976 1.57 0.00081 0/0 0 0 24404082 HCD 30 MS2 8.711608 676.7 48.228 77.7147 24044 24044 24040 QEplus033719.raw F4 726.7 637.5 776.8 495.2 757 666.9 146 2.31 1 FALSE 0.0004888 0.007747 0.444 -250 121703 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YAFGQEK [R].yAFGQEk.[T] N-Term(TMT6plex); K7(TMT6plex) 1 Q9CQ75 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Mus musculus OX=10090 GN=Ndufa2 PE=1 SV=3 Q9CQ75 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Mus musculus OX=10090 GN=Ndufa2 PE=1 SV=3 0 2 2 0.4051 0 1 1 1 650.87018 1300.73308 1300.73016 2.25 0.00146 0/0 0 0 17908226 HCD 30 MS2 43.11916 1235.3 95.516 77.717 24045 24045 24040 QEplus033719.raw F4 1240.9 999.8 1362.6 1244.5 1190.3 1373.6 347 1.95 1 FALSE 0.001074 0.01394 0.346 -250 121722 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KDEDLFR [K].kDEDLFR.[E] N-Term(TMT6plex); K1(TMT6plex) 1 O54962 Barrier-to-autointegration factor OS=Mus musculus OX=10090 GN=Banf1 PE=1 SV=1 O54962 Barrier-to-autointegration factor OS=Mus musculus OX=10090 GN=Banf1 PE=1 SV=1 1 2 2 0.4706 0 1 1 1 690.89923 1380.79119 1380.78874 1.77 0.00122 0/0 0 0 10874983 HCD 30 MS2 50.68119 596.6 110 77.722 24047 24047 24040 QEplus033719.raw F4 563.9 534.5 658.2 552.4 583.7 686.8 393 2.55 1 FALSE 0.000262 0.005311 0.494 -250 121727 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRDVSAYSK [K].lRDVSAYSk.[Y] N-Term(TMT6plex); K9(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.5236 0 1 1 1 748.94586 1496.88445 1496.8837 0.5 0.00037 0/0 0 0 10781454 HCD 30 MS2 0 412.5 110 77.7246 24048 24048 24040 QEplus033719.raw F4 397.7 385.5 457.5 363.5 427.9 442.8 355 2.33 2 FALSE 0.0003408 0.006522 0.468 -250 121734 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQDEFENR [K].lQDEFENR.[T] N-Term(TMT6plex) 5 A0JNY7 "Eukaryotic translation initiation factor 4, gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=2 SV=1" A0JNY7; Q62448; Q62448-2; F7CBP1; G3XA17 "Eukaryotic translation initiation factor 4, gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=1 SV=2; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2; Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus OX=10090 GN=Eif4g2 PE=1 SV=1" 0 2 2 0.6242 0 1 1 1 640.32623 1279.64519 1279.648 -2.19 -0.0014 0/0 0 0 9076296 HCD 30 MS2 52.97311 1001.3 110 77.7271 24049 24049 24040 QEplus033719.raw F4 959 854.5 1154.8 837.3 1084.9 1117.4 162 3.14 1 FALSE 0.0001813 0.00399 0.527 -250 121739 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ESEPQAAADATEVK [K].eSEPQAAADATEVk.[E] N-Term(TMT6plex); K14(TMT6plex) 1 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 Q91XV3 Brain acid soluble protein 1 OS=Mus musculus OX=10090 GN=Basp1 PE=1 SV=3 0 2 2 0.7574 0 1 1 1 952.50592 1904.00456 1904.00131 1.71 0.00163 0/0 0 0 5896314.5 HCD 30 MS2 0 338.3 110 77.7296 24050 24050 24040 QEplus033719.raw F4 321.4 341.6 411.4 255.1 352.1 348 371 5.07 1 FALSE 1.14E-05 1.78E-15 2.899 -250 121745 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDSTEPPYSQK [K].mDSTEPPYSQk.[R] N-Term(TMT6plex); K11(TMT6plex) 6 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 0 2 2 0.7044 0 1 1 1 870.94861 1740.88994 1740.88786 1.2 0.00104 0/0 0 0 208878256 HCD 30 MS2 4.848975 730.7 11.217 77.737 24052 24052 24051 QEplus033719.raw F4 762.6 552.8 819.2 661.8 791.1 796.8 249 4.33 1 FALSE 1.14E-05 6.47E-09 1.653 -250 121754 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEADYDK [K].lEADYDk.[K] N-Term(TMT6plex); K7(TMT6plex) 2 Q9EPU0 Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 PE=1 SV=2 Q9EPU0; Q9EPU0-2 Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 PE=1 SV=2; Isoform 2 of Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 0 2 2 0.4295 0 1 1 1 656.36499 1311.7227 1311.71965 2.33 0.00153 0/0 0 0 11463027 HCD 30 MS2 6.521084 945.2 110 77.7395 24053 24053 24051 QEplus033719.raw F4 982.2 771 1005.8 860.8 968 1083.4 319 3.05 1 FALSE 0.0002719 0.005473 0.49 -250 121760 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGIIDK [R].dGIIDk.[KE] N-Term(TMT6plex); K6(TMT6plex) 4 Q545G1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Mylpf PE=1 SV=1 Q545G1; F6ULR7; A0A0U1RP93; A0A0U1RQ36 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Mylpf PE=1 SV=1; Myosin regulatory light chain 2, skeletal muscle isoform (Fragment) OS=Mus musculus OX=10090 GN=Mylpf PE=1 SV=8; Myosin regulatory light chain 2, skeletal muscle isoform OS=Mus musculus OX=10090 GN=Mylpf PE=1 SV=1; Myosin regulatory light chain 2, skeletal muscle isoform (Fragment) OS=Mus musculus OX=10090 GN=Mylpf PE=1 SV=1" 0 2 2 0.11 0 1 1 3 559.84558 1118.68389 1118.68215 1.56 0.00087 0/0 0 0 108294976 HCD 30 MS2 32.54317 730.4 11.035 77.7417 24054 24054 24051 QEplus033719.raw F4 856.8 166.1 498.4 1329.3 242.2 1289.7 306 2.09 1 FALSE 0.004524 0.08062 0.06 -250 121761 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGILDK [R].dGILDk.[KE] N-Term(TMT6plex); K6(TMT6plex) 5 Q8BJ13; Q80ZF8; Q8K0A3; Q499E3; Q68FL1 Adhesion G protein-coupled receptor B3 OS=Mus musculus OX=10090 GN=Adgrb3 PE=1 SV=1; Adhesion G protein-coupled receptor B3 OS=Mus musculus OX=10090 GN=Adgrb3 PE=1 SV=2; Bai3 protein (Fragment) OS=Mus musculus OX=10090 GN=Adgrb3 PE=2 SV=1; Brain-specific angiogenesis inhibitor 3 OS=Mus musculus OX=10090 GN=Adgrb3 PE=2 SV=1; Adhesion G protein-coupled receptor B3 (Fragment) OS=Mus musculus OX=10090 GN=Adgrb3 PE=1 SV=1 0 2 2 0.11 0 1 2 2 559.84558 1118.68389 1118.68215 1.56 0.00087 0/0 0 0 108294976 HCD 30 MS2 32.54317 730.4 11.035 77.7417 24054 24054 24051 QEplus033719.raw F4 856.8 166.1 498.4 1329.3 242.2 1289.7 306 2.09 1 FALSE 0.004524 0.08062 0.06 -250 121777 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVVEKPGR [K].iVVEkPGR.[I] N-Term(TMT6plex); K5(TMT6plex) 8 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; Q3TZL3; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.5839 0 1 1 1 452.63232 1355.88242 1355.87749 3.63 0.00164 0/0 0 0 8131124 HCD 30 MS2 34.11889 1108.5 110 77.7465 24056 24056 24051 QEplus033719.raw F4 1125.6 504.2 998.2 1551 843 1629.1 69 2.98 2 FALSE 3.35E-05 0.001283 0.64 -250 121800 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DPYGNRPLCIGR [R].dPYGNRPLcIGR.[L] N-Term(TMT6plex); C9(Carbamidomethyl) 5 Q3TKC5 Amidophosphoribosyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Ppat PE=2 SV=1 Q3TKC5; Q3UGA8; Q8CIH9; Q3TUW2; Q3UGU3 Amidophosphoribosyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Ppat PE=2 SV=1; Amidophosphoribosyltransferase OS=Mus musculus OX=10090 GN=Ppat PE=2 SV=1; Amidophosphoribosyltransferase OS=Mus musculus OX=10090 GN=Ppat PE=1 SV=1; Amidophosphoribosyltransferase OS=Mus musculus OX=10090 GN=Ppat PE=2 SV=1; Amidophosphoribosyltransferase OS=Mus musculus OX=10090 GN=Ppat PE=2 SV=1 0 3 3 0.3864 0 1 1 1 549.62811 1646.86979 1646.86343 3.86 0.00212 0/0 0 0 4661829 HCD 30 MS2 27.35221 672.7 110 77.754 24059 24059 24051 QEplus033719.raw F4 652.8 636.2 690.9 532.7 792.7 730.7 294 2.95 1 FALSE 0.0001504 0.003461 0.543 -250 121807 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATYIHNCLK [K].aTYIHNcLk.[N] N-Term(TMT6plex); C7(Carbamidomethyl); K9(TMT6plex) 3 Q9CR26 Vacuolar protein sorting-associated protein VTA1 homolog OS=Mus musculus OX=10090 GN=Vta1 PE=1 SV=1 Q3V4B3; F6W5Q8; Q9CR26 Vta1 domain-containing protein OS=Mus musculus OX=10090 GN=Vta1 PE=2 SV=1; Vacuolar protein sorting-associated protein VTA1 homolog (Fragment) OS=Mus musculus OX=10090 GN=Vta1 PE=1 SV=8; Vacuolar protein sorting-associated protein VTA1 homolog OS=Mus musculus OX=10090 GN=Vta1 PE=1 SV=1 0 3 3 0.6218 0 1 1 1 526.6355 1577.89194 1577.8874 2.88 0.00151 0/0 0 0 14131764 HCD 30 MS2 39.85345 612.5 33.619 77.7562 24060 24060 24051 QEplus033719.raw F4 551.9 528.1 704.9 587 615.8 687.6 414 3.57 1 FALSE 1.14E-05 0.0004785 0.726 -250 121820 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGIVSQVK [R].gGIVSQVk.[V] N-Term(TMT6plex); K8(TMT6plex) 3 A0A1S6GWH5 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1 P31254; A0A1S6GWH5; Q02053 Ubiquitin-like modifier-activating enzyme 1 Y OS=Mus musculus OX=10090 GN=Uba1y PE=1 SV=2; Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1; Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus OX=10090 GN=Uba1 PE=1 SV=1 0 2 2 0.4643 0 1 1 1 623.40063 1245.79399 1245.79309 0.72 0.00045 0/0 0 0 24645416 HCD 30 MS2 18.99453 1309.8 63.849 77.7658 24063 24063 24062 QEplus033719.raw F4 1372.1 1172.4 1491.5 1015.4 1451.5 1355.6 444 3.36 1 FALSE 1.14E-05 0.0001176 0.844 -250 121833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KDEDLFR [K].kDEDLFR.[E] N-Term(TMT6plex); K1(TMT6plex) 1 O54962 Barrier-to-autointegration factor OS=Mus musculus OX=10090 GN=Banf1 PE=1 SV=1 O54962 Barrier-to-autointegration factor OS=Mus musculus OX=10090 GN=Banf1 PE=1 SV=1 1 3 3 0.5779 0 1 1 1 460.93488 1380.79007 1380.78874 0.97 0.00045 0/0 0 0 104630320 HCD 30 MS2 12.94366 702 11.336 77.7706 24065 24065 24062 QEplus033719.raw F4 633.5 595.8 796.5 619.3 676.5 890.5 409 2.63 1 FALSE 0.002173 0.04138 0.17 -250 121841 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MIYASSK [K].mIYASSk.[D] N-Term(TMT6plex); K7(TMT6plex) 6 Q9R0P5; Q3UHW9; P18760 Destrin OS=Mus musculus OX=10090 GN=Dstn PE=1 SV=3;ADF-H domain-containing protein OS=Mus musculus OX=10090 GN=Cfl2 PE=1 SV=1;Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3 Q9R0P5; Q3UHW9; Q9CX22; A0A494B9A7; P18760; F8WGL3 "Destrin OS=Mus musculus OX=10090 GN=Dstn PE=1 SV=3; ADF-H domain-containing protein OS=Mus musculus OX=10090 GN=Cfl2 PE=1 SV=1; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=2 SV=1; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1; Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1" 0 2 2 0.4397 0 1 1 1 629.3678 1257.72832 1257.72772 0.48 0.0003 0/0 0 0 53300252 HCD 30 MS2 38.07799 1178.3 23.992 77.7728 24066 24066 24062 QEplus033719.raw F4 1415.3 1296.6 1355.3 730.2 1170 1102.5 397 2.57 3 FALSE 0.0003211 0.006217 0.474 -250 121849 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATDFVVDR [K].aTDFVVDR.[A] N-Term(TMT6plex) 3 P54071 "Isocitrate dehydrogenase [NADP], mitochondrial OS=Mus musculus OX=10090 GN=Idh2 PE=1 SV=3" A0A0U1RP68; P54071; D6RIL6 "Isocitrate dehydrogenase [NADP], mitochondrial (Fragment) OS=Mus musculus OX=10090 GN=Idh2 PE=1 SV=1; Isocitrate dehydrogenase [NADP], mitochondrial OS=Mus musculus OX=10090 GN=Idh2 PE=1 SV=3; Isocitrate dehydrogenase [NADP], mitochondrial OS=Mus musculus OX=10090 GN=Idh2 PE=1 SV=1" 0 2 2 0.592 0 1 1 1 576.3158 1151.62432 1151.6258 -1.29 -0.00074 0/0 0 0 49787844 HCD 30 MS2 32.51191 1084.7 24.954 77.7751 24067 24067 24062 QEplus033719.raw F4 1044.8 1047.6 1217.8 887.5 1220.9 1089.5 194 3.26 1 FALSE 1.14E-05 0.0008764 0.674 -250 121873 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RDVQEIFR [R].rDVQEIFR.[LM] N-Term(TMT6plex) 11 Q9Z1N5; Q3UVN0 Spliceosome RNA helicase Ddx39b OS=Mus musculus OX=10090 GN=Ddx39b PE=1 SV=1;RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1 Q3TPL7; Q9Z1N5; A0A1S6GWH2; Q3U837; Q3UVN0; Q3TIE4; Q3T9L0; Q8VDW0; G3UXI6; Q3UAF1; Q3TB18 RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; Spliceosome RNA helicase Ddx39b OS=Mus musculus OX=10090 GN=Ddx39b PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39b PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; ATP-dependent RNA helicase DDX39A OS=Mus musculus OX=10090 GN=Ddx39a PE=1 SV=1; Spliceosome RNA helicase Ddx39b (Fragment) OS=Mus musculus OX=10090 GN=Ddx39b PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ddx39a PE=2 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Ddx39b PE=2 SV=1 1 3 3 0.4397 0 1 1 1 431.24884 1291.73197 1291.732 -0.03 -0.00001 0/0 0 0 11088690 HCD 30 MS2 55.33555 477.8 85.142 77.7821 24070 24070 24062 QEplus033719.raw F4 502.3 407.4 502.4 392.7 526.4 535.8 494 3.98 2 FALSE 1.14E-05 3.98E-07 1.313 -250 121878 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMADEVTEK [K].aMADEVTEk.[Q] N-Term(TMT6plex); K9(TMT6plex) 3 P49817 Caveolin-1 OS=Mus musculus OX=10090 GN=Cav1 PE=1 SV=1 H3BKG0; D3Z148; P49817 Caveolin-1 OS=Mus musculus OX=10090 GN=Cav1 PE=1 SV=1; Caveolin (Fragment) OS=Mus musculus OX=10090 GN=Cav1 PE=1 SV=2; Caveolin-1 OS=Mus musculus OX=10090 GN=Cav1 PE=1 SV=1 0 2 2 0.6253 0 1 1 1 726.39496 1451.78264 1451.7816 0.72 0.00052 0/0 0 0 10704826 HCD 30 MS2 12.06306 707 110 77.7846 24071 24071 24062 QEplus033719.raw F4 678.4 750.5 759.9 523.6 900.1 629.8 360 4.11 1 FALSE 1.14E-05 3.91E-07 1.315 -250 121894 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YALQVKPQR [R].yALQVkPQR.[L] N-Term(TMT6plex); K6(TMT6plex) 1 Q8C0D5 Elongation factor-like GTPase 1 OS=Mus musculus OX=10090 GN=Efl1 PE=1 SV=1 Q8C0D5 Elongation factor-like GTPase 1 OS=Mus musculus OX=10090 GN=Efl1 PE=1 SV=1 0 3 3 0.3256 0 1 1 1 520.9917 1560.96054 1560.96262 -1.33 -0.00069 0/0 0 0 6574437.5 HCD 30 MS2 16.84188 993.2 110 77.7945 24074 24074 24073 QEplus033719.raw F4 1001.2 982.9 926.6 664.7 1522.6 861.3 389 2.15 1 FALSE 0.001359 0.01938 0.286 -250 121899 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVGKEELGK [K].aVGkEELGk.[N] N-Term(TMT6plex); K4(TMT6plex); K9(TMT6plex) 2 Q9JKR6 Hypoxia up-regulated protein 1 OS=Mus musculus OX=10090 GN=Hyou1 PE=1 SV=1 Q8VCI2; Q9JKR6 Hyou1 protein OS=Mus musculus OX=10090 GN=Hyou1 PE=2 SV=1; Hypoxia up-regulated protein 1 OS=Mus musculus OX=10090 GN=Hyou1 PE=1 SV=1 1 3 3 0.5101 0 1 1 1 540.01001 1618.01548 1618.01427 0.75 0.0004 0/0 0 0 28681014 HCD 30 MS2 8.664786 1311.3 69.511 77.7992 24076 24076 24073 QEplus033719.raw F4 1290.9 1226.4 1435 1186.7 1332 1396.8 387 2.47 1 FALSE 1.14E-05 0.0004601 0.729 -250 121909 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DSKSEETLDEGPPK [K].dSkSEETLDEGPPk.[Y] N-Term(TMT6plex); K3(TMT6plex); K14(TMT6plex) 1 Q62446 Peptidyl-prolyl cis-trans isomerase FKBP3 OS=Mus musculus OX=10090 GN=Fkbp3 PE=1 SV=2 Q62446 Peptidyl-prolyl cis-trans isomerase FKBP3 OS=Mus musculus OX=10090 GN=Fkbp3 PE=1 SV=2 1 3 3 0.5283 0 1 1 1 740.40601 2219.20346 2219.20102 1.1 0.00082 0/0 0 0 4535607.5 HCD 30 MS2 9.008763 380.7 110 77.8017 24077 24077 24073 QEplus033719.raw F4 354.2 370.4 428.9 384.7 366.9 379 448 5.3 1 FALSE 1.14E-05 8.40E-15 2.771 -250 121917 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMIDRIPCGR [K].eMIDRIPcGR.[L] N-Term(TMT6plex); C8(Carbamidomethyl) 1 Q9CQ62 "2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial OS=Mus musculus OX=10090 GN=Decr1 PE=1 SV=1" Q9CQ62 "2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial OS=Mus musculus OX=10090 GN=Decr1 PE=1 SV=1" 1 3 3 0.4895 0 1 1 1 492.59357 1475.76615 1475.76602 0.09 0.00004 0/0 0 0 5797567 HCD 30 MS2 61.33285 997 110 77.8042 24078 24078 24073 QEplus033719.raw F4 1076.5 853.4 1044.6 697.3 1317.4 993 226 2.37 1 FALSE 0.001351 0.01922 0.288 -250 121921 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSLCGYQIR [R].nSLcGYQIR.[M] N-Term(TMT6plex); C4(Carbamidomethyl) 1 Q6PGC1 ATP-dependent RNA helicase DHX29 OS=Mus musculus OX=10090 GN=Dhx29 PE=1 SV=1 Q6PGC1 ATP-dependent RNA helicase DHX29 OS=Mus musculus OX=10090 GN=Dhx29 PE=1 SV=1 0 2 2 0.4601 0 1 1 1 670.35492 1339.70256 1339.69899 2.67 0.00179 0/0 0 0 3710142.75 HCD 30 MS2 17.80757 382.3 110 77.8067 24079 24079 24073 QEplus033719.raw F4 363.2 312.8 414.1 359.8 403 440.9 213 2.63 1 FALSE 1.14E-05 0.0005711 0.711 -250 121929 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SQMPQEAPDDSGDMK [K].sQMPQEAPDDSGDMk.[E] N-Term(TMT6plex); K15(TMT6plex) 2 Q9EP71 Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1 Q9EP71; A0A2I3BPY7 Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1; Ankycorbin OS=Mus musculus OX=10090 GN=Rai14 PE=1 SV=1 0 3 3 0.7778 0 1 1 1 698.66888 2093.9921 2093.98838 1.78 0.00124 0/0 0 0 3039414.25 HCD 30 MS2 0 328.1 110 77.8092 24080 24080 24073 QEplus033719.raw F4 314.7 293.6 350.9 323.3 349.6 336.6 122 4.32 1 FALSE 1.14E-05 2.66E-08 1.536 -250 121937 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILAEGGGAK [K].iLAEGGGAk.[F] N-Term(TMT6plex); K9(TMT6plex) 2 Q8BFR5 "Elongation factor Tu, mitochondrial OS=Mus musculus OX=10090 GN=Tufm PE=1 SV=1" Q8BFR5; Q8BFR5-2 "Elongation factor Tu, mitochondrial OS=Mus musculus OX=10090 GN=Tufm PE=1 SV=1; Isoform 2 of Elongation factor Tu, mitochondrial OS=Mus musculus OX=10090 GN=Tufm" 0 2 2 0.3672 0 1 1 1 637.39777 1273.78826 1273.78801 0.19 0.00012 0/0 0 0 41711496 HCD 30 MS2 13.73509 1209 54.405 77.8115 24081 24081 24073 QEplus033719.raw F4 1272.6 934.3 1300.1 1272.7 1089.2 1385.2 534 3.35 1 FALSE 1.14E-05 3.80E-06 1.127 -250 121953 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPVPVPK [K].kPVPVPk.[K] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 5 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.1076 0 1 1 2 484.66904 1451.99256 1451.99168 0.6 0.00029 0/0 0 0 19188956 HCD 30 MS2 47.70995 1225.3 101.16 77.8164 24083 24083 24073 QEplus033719.raw F4 1301.5 541.5 1080.5 1773.4 735.2 1919.6 7 3.16 2 FALSE 0.0005556 0.00848 0.43 -250 121966 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLNTNIDGR [R].vLNTNIDGR.[R] N-Term(TMT6plex) 6 Q561N5 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1 S4R1N6; Q561N5; Q3TW65; F6YVP7; A0A3Q4EGP3; A0A1Y7VKY1 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=3 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps6 PE=3 SV=2; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=4 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps5 PE=3 SV=1 0 2 2 0.5719 0 1 1 1 615.85394 1230.70061 1230.70037 0.2 0.00012 0/0 0 0 63907972 HCD 30 MS2 5.79751 564.2 20.598 77.826 24086 24086 24084 QEplus033719.raw F4 559.3 451.8 638.5 499 586.4 650 364 3.27 1 FALSE 1.14E-05 3.49E-05 0.944 -250 121975 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLTGIK [K].kLTGIk.[H] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 3 P18760 Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3 Q9CX22; P18760; F8WGL3 "Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=2 SV=1; Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1" 1 3 3 0.1733 0 1 1 1 449.64972 1346.9346 1346.93383 0.57 0.00026 0/0 0 0 40106248 HCD 30 MS2 30.32626 1008.7 27.921 77.8282 24087 24087 24084 QEplus033719.raw F4 1235.3 853.7 990.6 709.8 1469 794 79 2.25 1 FALSE 0.008243 0.1409 -0.076 -250 121994 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLEEALR [K].sLEEALR.[T] N-Term(TMT6plex) 2 Q91YR9 Prostaglandin reductase 1 OS=Mus musculus OX=10090 GN=Ptgr1 PE=1 SV=2 Q91YR9; Q4FJY5 Prostaglandin reductase 1 OS=Mus musculus OX=10090 GN=Ptgr1 PE=1 SV=2; 15-oxoprostaglandin 13-reductase OS=Mus musculus OX=10090 GN=Ptgr1 PE=2 SV=1 0 2 2 0.0727 0 1 1 1 523.80682 1046.60637 1046.60434 1.94 0.00102 0/0 0 0 19516838 HCD 30 MS2 53.49664 1500.8 75.972 77.8327 24089 24089 24084 QEplus033719.raw F4 1565.1 1350.1 1542.3 1218.6 1825.8 1502.9 231 2.2 1 FALSE 0.0001603 0.003815 0.532 -250 122003 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELSGTIK [R].eLSGTIk.[E] N-Term(TMT6plex); K7(TMT6plex) 2 Q5BLK0; Q8C2K0 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=1 SV=1;60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1 Q5BLK0; Q8C2K0 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=1 SV=1; 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1 0 2 2 0.1913 0 1 1 1 603.38055 1205.75383 1205.75056 2.71 0.00164 0/0 0 0 18515614 HCD 30 MS2 32.9179 1637.8 96.174 77.835 24090 24090 24084 QEplus033719.raw F4 1923.5 1293.3 1734.1 1322.4 1844.9 1708.5 291 2.3 2 FALSE 0.001092 0.01414 0.344 -250 122017 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGNCYLDIRPR [CR].sGNcYLDIRPR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 2 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 0 3 3 0.4669 0 1 1 1 527.28082 1579.82792 1579.82123 4.23 0.00223 0/0 0 0 12348277 HCD 30 MS2 61.42563 753.5 58.972 77.8398 24092 24092 24084 QEplus033719.raw F4 720.1 647.6 873.3 695.6 761.8 822.4 296 2.42 1 FALSE 0.002064 0.03796 0.182 -250 122029 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDASTGDAIK [R].mDASTGDAIk.[T] N-Term(TMT6plex); K10(TMT6plex) 2 Q3TLE2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fermt2 PE=1 SV=1 Q3UMA4; Q3TLE2 B41 domain-containing protein OS=Mus musculus OX=10090 GN=Fermt2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fermt2 PE=1 SV=1 0 2 2 0.6353 0 1 1 1 733.90369 1466.8001 1466.7925 5.18 0.0038 0/0 0 0 5681987.5 HCD 30 MS2 0 472.2 110 77.8448 24094 24094 24084 QEplus033719.raw F4 486.9 434.2 526.9 366.2 504.9 514.1 338 3.51 1 FALSE 1.14E-05 3.01E-08 1.526 -250 122035 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIGNIK [R].sIGNIk.[F] N-Term(TMT6plex); K6(TMT6plex) 10 Z4YKC4 Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3 PE=1 SV=1 A2AMI7; Q80XI3-2; Q80XI3-3; Q6DI78; Z4YKC4; A2AMI2; Q80XI3; Q80XI3-4; A0A0R4J112; A0A0N4SVL0 Eukaryotic translation initiation factor 4 gamma 3 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g3 PE=1 SV=1; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3; Isoform 3 of Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3; Eif4g3 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g3 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3 PE=1 SV=2; Isoform 4 of Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3; Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus OX=10090 GN=Eif4g3 PE=1 SV=2 0 2 2 0.1675 0 1 1 1 545.35779 1089.7083 1089.70322 4.67 0.00254 0/0 0 0 54431672 HCD 30 MS2 46.56675 1100.8 13.456 77.8521 24096 24096 24095 QEplus033719.raw F4 1047.2 973 1136.1 884.9 1386.5 1176.9 154 2.09 1 FALSE 0.00597 0.09881 0.01 -250 122036 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLGNIK [R].sLGNIk.[F] N-Term(TMT6plex); K6(TMT6plex) 11 E9PVC5 Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 Q3UZD9; Q6NZJ6-2; A0A0J9YVC1; E9Q9E1; Q6PD42; E9Q770; E9PVC5; E9PVC6; A0A0J9YUS5; A0A0J9YUC1; Q6NZJ6 MIF4G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Isoform 2 of Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eif4g1 protein (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=2 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 (Fragment) OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1; Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus OX=10090 GN=Eif4g1 PE=1 SV=1 0 2 2 0.1675 0 1 2 2 545.35779 1089.7083 1089.70322 4.67 0.00254 0/0 0 0 54431672 HCD 30 MS2 46.56675 1100.8 13.456 77.8521 24096 24096 24095 QEplus033719.raw F4 1047.2 973 1136.1 884.9 1386.5 1176.9 154 2.09 1 FALSE 0.00597 0.09881 0.01 -250 122045 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEALQK [K].vEALQk.[V] N-Term(TMT6plex); K6(TMT6plex) 4 Q3UMU9 Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2 PE=1 SV=1 Q3UMU9-4; Q3UMU9-3; Q3UMU9-2; Q3UMU9 Isoform 4 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Isoform 3 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Isoform 2 of Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2; Hepatoma-derived growth factor-related protein 2 OS=Mus musculus OX=10090 GN=Hdgfl2 PE=1 SV=1 0 2 2 0.0887 0 1 1 1 573.36804 1145.72881 1145.72943 -0.54 -0.00031 0/0 0 0 15064252 HCD 30 MS2 48.92977 1582.2 76.78 77.8544 24097 24097 24095 QEplus033719.raw F4 1572.5 1274.8 1602.7 1160.9 2322.4 1559.8 263 2.48 1 FALSE 0.002465 0.0487 0.146 -250 122054 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTRDETNYGIPQR [K].lTRDETNYGIPQR.[A] N-Term(TMT6plex) 1 P68040 Receptor of activated protein C kinase 1 OS=Mus musculus OX=10090 GN=Rack1 PE=1 SV=3 P68040 Receptor of activated protein C kinase 1 OS=Mus musculus OX=10090 GN=Rack1 PE=1 SV=3 1 3 3 0.7238 0 1 1 1 597.99054 1791.95707 1791.95508 1.11 0.00066 0/0 0 0 96913848 HCD 30 MS2 8.241804 453.6 20.483 77.8566 24098 24098 24095 QEplus033719.raw F4 426.9 411.6 530.8 358 531.4 462.6 411 4.67 1 FALSE 1.14E-05 7.77E-12 2.208 -250 122057 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IASDGLK [K].iASDGLk.[G] N-Term(TMT6plex); K7(TMT6plex) 5 P97351 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3 Q3UJU5; P97351; Q3U5P8; Q3UAC2; Q9D1S3 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1 0 3 3 0.3172 0 1 1 1 387.91327 1161.72525 1161.72434 0.78 0.0003 0/0 0 0 19392034 HCD 30 MS2 19.56213 552.2 69.012 77.8589 24099 24099 24095 QEplus033719.raw F4 563.4 454.9 626.8 446.8 568.9 652.5 517 2.27 1 FALSE 0.001395 0.0199 0.282 -250 122066 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLQDLHK [K].dLQDLHk.[D] N-Term(TMT6plex); K7(TMT6plex) 2 Q8K4Q8 Collectin-12 OS=Mus musculus OX=10090 GN=Colec12 PE=1 SV=1 Q8K4Q8; A0A452J8C7 Collectin-12 OS=Mus musculus OX=10090 GN=Colec12 PE=1 SV=1; Collectin-12 OS=Mus musculus OX=10090 GN=Colec12 PE=1 SV=1 0 3 3 0.3172 0 1 1 1 442.93182 1326.78092 1326.77817 2.07 0.00092 0/0 0 0 8436861 HCD 30 MS2 31.80554 909.7 110 77.8614 24100 24100 24095 QEplus033719.raw F4 890.8 919.6 1119.1 661.1 898.1 969.7 280 3.09 1 FALSE 0.0003496 0.006932 0.459 -250 122070 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RADLYTVESK [K].rADLYTVESk.[K] N-Term(TMT6plex); K10(TMT6plex) 2 Q9JHW2 Omega-amidase NIT2 OS=Mus musculus OX=10090 GN=Nit2 PE=1 SV=1 A0A338P6G0; Q9JHW2 Omega-amidase NIT2 OS=Mus musculus OX=10090 GN=Nit2 PE=1 SV=1; Omega-amidase NIT2 OS=Mus musculus OX=10090 GN=Nit2 PE=1 SV=1 1 3 3 0.6134 0 1 1 1 547.31647 1639.93485 1639.94194 -4.33 -0.00236 0/0 0 0 7865362.5 HCD 30 MS2 56.72498 1188.4 110 77.8639 24101 24101 24095 QEplus033719.raw F4 1178.4 985.4 1278.7 935.9 1503.7 1248.3 384 4.76 1 FALSE 1.14E-05 3.56E-05 0.943 -250 122083 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LYEQHLGK [K].lYEQHLGk.[S] N-Term(TMT6plex); K8(TMT6plex) 7 Q5SX40; Q5SX39 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1 Q5SX40; Q5SX39; G3UW82; Q3UUB1; B2RWX0; Q8BLW0; I6L963 "Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1" 0 3 3 0.5809 0 1 1 1 482.62259 1445.85321 1445.85167 1.07 0.00051 0/0 0 0 28452882 HCD 30 MS2 12.31026 1113.5 83.982 77.8686 24103 24103 24095 QEplus033719.raw F4 1403.6 256.7 551 2645.7 455.7 1368.5 462 3.46 2 FALSE 1.14E-05 1.11E-06 1.229 -250 122088 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SLGQPIK [K].sLGQPIk.[T] N-Term(TMT6plex); K7(TMT6plex) 4 Q571M2 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 Q571M2; Q61316; Q3U2G2; Q99L75 Heat shock 70 kDa protein 4 (Fragment) OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=1 SV=1; Heat shock 70 kDa protein 4 OS=Mus musculus OX=10090 GN=Hspa4 PE=2 SV=1 0 2 2 0.275 0 1 1 1 600.89008 1200.77287 1200.77163 1.04 0.00062 0/0 0 0 23460802 HCD 30 MS2 52.04907 1367.8 66.194 77.8709 24104 24104 24095 QEplus033719.raw F4 1510.7 1136.7 1459.5 1229.9 1413.3 1456.9 209 2 1 FALSE 0.001584 0.02407 0.25 -250 122116 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TEELEEAKK [R].tEELEEAkk.[K] N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex) 14 Q5SX40; P13541; Q5SX39; B2RY26; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q5SX40; P13541; Q5SX39; G3UW82; B2RWX0; B2RQQ1; I6L963; B1AR69; B2RY26; A2AQP0; B2RXX9; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-7B OS=Mus musculus OX=10090 GN=Myh7b PE=3 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 2 2 0.5826 0 1 1 1 882.52136 1764.03545 1764.03579 -0.19 -0.00017 0/0 0 0 10847169 HCD 30 MS2 26.37061 433.7 110 77.8832 24108 24108 24106 QEplus033719.raw F4 536.5 64.7 250.7 986.3 80 683.9 405 3.33 5 FALSE 1.14E-05 2.03E-05 0.989 -250 122122 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGEFSGANK [K].vGEFSGANk.[E] N-Term(TMT6plex); K9(TMT6plex) 1 P10639 Thioredoxin OS=Mus musculus OX=10090 GN=Txn PE=1 SV=3 P10639 Thioredoxin OS=Mus musculus OX=10090 GN=Txn PE=1 SV=3 0 2 2 0.5232 0 1 1 1 683.88971 1366.77214 1366.77309 -0.69 -0.00047 0/0 0 0 41255504 HCD 30 MS2 42.6326 1291.1 53.803 77.8855 24109 24109 24106 QEplus033719.raw F4 1466 1217.8 1416.5 973 1415.5 1257.7 415 3.23 1 FALSE 1.14E-05 4.90E-06 1.106 -250 122144 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGGVESAFHK [R].eGGVESAFHk.[T] N-Term(TMT6plex); K10(TMT6plex) 7 Q3UJ44 Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=2 SV=1 D3YTL5; Q3UJ44; Q3TNN6; D3YU77; D3YZN3; Q99LB4; P24452 Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Capg PE=1 SV=1; Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=2 SV=1; Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=2 SV=1; Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Capg PE=1 SV=1; Macrophage-capping protein (Fragment) OS=Mus musculus OX=10090 GN=Capg PE=1 SV=1; Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=1 SV=1; Macrophage-capping protein OS=Mus musculus OX=10090 GN=Capg PE=1 SV=2 0 3 3 0.6852 0 1 1 1 506.94794 1518.82926 1518.83166 -1.58 -0.0008 0/0 0 0 13442295 HCD 30 MS2 53.53479 1167.8 75.858 77.8925 24112 24112 24106 QEplus033719.raw F4 1119 1048.3 1209.4 1139.6 1408.6 1081.6 384 3.78 1 FALSE 1.14E-05 6.86E-07 1.268 -250 122152 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLEAYLTR [R].rLEAYLTR.[V] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 1 2 2 0.5134 0 1 1 1 625.87531 1250.74333 1250.74184 1.2 0.00075 0/0 0 0 6793583 HCD 30 MS2 22.41462 614 110 77.8975 24114 24114 24106 QEplus033719.raw F4 588.1 480.9 675.8 543.8 664.9 730.3 308 2.61 1 FALSE 0.002293 0.0449 0.158 -250 122160 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLVAQHDAYK [K].vLVAQHDAYk.[G] N-Term(TMT6plex); K10(TMT6plex) 1 Q99LC5 "Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Etfa PE=1 SV=2" Q99LC5 "Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Etfa PE=1 SV=2" 0 2 2 0.4374 0 1 1 1 801.4715 1601.93572 1601.94155 -3.64 -0.00292 0/0 0 0 4299282.5 HCD 30 MS2 0 265.7 110 77.9 24115 24115 24106 QEplus033719.raw F4 238.2 213.9 295.6 287 230.2 329.3 418 4.23 1 FALSE 1.14E-05 1.51E-08 1.583 -250 122170 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECLVCTGCK [R].ecLVcTGck.[T] N-Term(TMT6plex); C2(Carbamidomethyl); C5(Carbamidomethyl); C8(Carbamidomethyl); K9(TMT6plex) 2 Q9R059 Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=2 F2Z455; Q9R059 Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=1; Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=2 0 2 2 0.6676 0 1 1 1 792.90253 1584.79778 1584.79483 1.86 0.00148 0/0 0 0 3508247.75 HCD 30 MS2 0 454.7 110 77.9025 24116 24116 24106 QEplus033719.raw F4 465.1 457.8 509.5 397.6 428.9 469.3 187 3.49 1 FALSE 1.14E-05 6.08E-06 1.088 -250 122175 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDSTEPPYSQK [K].mDSTEPPYSQk.[R] N-Term(TMT6plex); K11(TMT6plex) 6 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 0 3 3 0.7569 0 1 1 1 580.96863 1740.89133 1740.88786 2 0.00116 0/0 0 0 422814592 HCD 30 MS2 36.17178 658.4 3.515 77.9098 24118 24118 24117 QEplus033719.raw F4 635.5 525.7 740.1 576.5 707.6 765.1 257 3.25 1 FALSE 1.14E-05 3.19E-06 1.142 -250 122182 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTLSTDK [K].vTLSTDk.[N] N-Term(TMT6plex); K7(TMT6plex) 1 Q8BU30 "Isoleucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Iars1 PE=1 SV=2" Q8BU30 "Isoleucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Iars1 PE=1 SV=2" 0 2 2 0.2605 0 1 1 1 611.37634 1221.74541 1221.74547 -0.05 -0.00003 0/0 0 0 16005835 HCD 30 MS2 16.09463 1233.2 110 77.9124 24119 24119 24117 QEplus033719.raw F4 1254.9 935.6 1332.1 1067 1313.8 1495.5 278 2.38 1 FALSE 0.001101 0.0142 0.343 -250 122192 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGLIAAR [K].vGLIAAR.[R] N-Term(TMT6plex) 3 P62918 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2 Q3UJS0; P62918; Q3THC7 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=1 SV=2; 60S ribosomal protein L8 OS=Mus musculus OX=10090 GN=Rpl8 PE=2 SV=1 0 2 2 0.5125 0 1 1 1 464.81116 928.61504 928.61412 0.99 0.00046 0/0 0 0 242691568 HCD 30 MS2 32.00296 842.4 5.28 77.9146 24120 24120 24117 QEplus033719.raw F4 746.3 625.5 943.3 701.3 1050.8 987.2 64 2.4 1 FALSE 0.0009824 0.01314 0.357 -250 122212 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDAGFTLR [R].tDAGFTLR.[W] N-Term(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 2 2 0.5433 0 1 1 1 555.31201 1109.61675 1109.61524 1.36 0.00075 0/0 0 0 39341084 HCD 30 MS2 8.85413 1080.9 56.444 77.9214 24123 24123 24117 QEplus033719.raw F4 1103.3 875.2 1187.5 933.9 1152.4 1232.9 183 2.89 1 FALSE 4.43E-05 0.001505 0.625 -250 122219 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NYLLQCTR [R].nYLLQcTR.[N] N-Term(TMT6plex); C6(Carbamidomethyl) 5 Q3TRJ1 Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=1 SV=1 Q3TRJ1; Q3TUV7; Q3UQJ1; Q3TKU6; Q3TJ43 Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1; Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1; Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1 0 2 2 0.7492 0 1 1 1 648.85046 1296.69365 1296.69317 0.37 0.00024 0/0 0 0 25111830 HCD 30 MS2 12.44837 1097.9 110 77.9239 24124 24124 24117 QEplus033719.raw F4 1086 948.6 1278.8 902.2 1213.1 1158.4 324 2.99 1 FALSE 3.35E-05 0.001266 0.641 -250 122227 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITQQMPK [K].iTQQMPk.[V] N-Term(TMT6plex); K7(TMT6plex) 4 Q8VDJ3 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1 Q8VDJ3; Q8BX68; A0A087WP83; Q3V1M8 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1; Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1 0 2 2 0.4104 0 1 1 1 652.39435 1303.78142 1303.78081 0.46 0.0003 0/0 0 0 23274120 HCD 30 MS2 16.29745 1064.7 86.459 77.9262 24125 24125 24117 QEplus033719.raw F4 1045.8 895 1165.7 889.6 1239.9 1152.4 594 2.68 1 FALSE 0.001185 0.0162 0.319 -250 122265 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YRVTYSSPEDGIR [R].yRVTYSSPEDGIR.[E] N-Term(TMT6plex) 10 P11276; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4;Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 A0A087WS56; P11276; Q3UHL6; Q3UHR1; A0A087WR50; Q3UZF9; Q8R3F3; Q3UGY5; Q9Z1Z8; Q3UH17 Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1; Fibronectin (Fragment) OS=Mus musculus OX=10090 PE=4 SV=1; Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=2 SV=1 1 3 3 0.6524 0 1 1 1 591.31055 1771.91709 1771.91763 -0.31 -0.00018 0/0 0 0 83847120 HCD 30 MS2 43.94418 766.6 14.563 77.9428 24131 24131 24128 QEplus033719.raw F4 698.7 684.8 955.3 811.4 640.6 808.6 246 5.15 2 FALSE 1.14E-05 2.47E-09 1.732 -250 122270 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLEAYLTR [R].rLEAYLTR.[V] N-Term(TMT6plex) 2 Q6P5H2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1 Q6P5H2; Q6P5H2-2 Nestin OS=Mus musculus OX=10090 GN=Nes PE=1 SV=1; Isoform 2 of Nestin OS=Mus musculus OX=10090 GN=Nes 1 3 3 0.541 0 1 1 1 417.58566 1250.74244 1250.74184 0.48 0.0002 0/0 0 0 73516560 HCD 30 MS2 5.484201 248.7 17.629 77.945 24132 24132 24128 QEplus033719.raw F4 262.3 159.3 309.2 220 219.4 322.2 338 4.51 1 FALSE 1.14E-05 1.33E-05 1.024 -250 122300 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ITQQMPK [K].iTQQMPk.[V] N-Term(TMT6plex); K7(TMT6plex) 4 Q8VDJ3 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1 Q8VDJ3; Q8BX68; A0A087WP83; Q3V1M8 Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1; Vigilin OS=Mus musculus OX=10090 GN=Hdlbp PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hdlbp PE=2 SV=1 0 3 3 0.4333 0 1 1 1 435.26538 1303.78159 1303.78081 0.59 0.00026 0/0 0 0 16611329 HCD 30 MS2 34.64486 653 62.099 77.9541 24136 24136 24128 QEplus033719.raw F4 670 535.6 716.3 512.5 793.5 690 583 2.4 1 FALSE 0.006697 0.1064 -0.011 -250 122329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KITDDQQESLNK [K].kITDDQQESLNk.[W] N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex) 5 P32067 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 P32067; Q3TG93; Q9CYB9; Q8BTU4; F6SXM5 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; HTH La-type RNA-binding domain-containing protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Lupus La protein homolog (Fragment) OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 1 3 3 0.6244 0 1 1 1 702.73889 2106.20212 2106.20096 0.55 0.00039 0/0 0 0 50128964 HCD 30 MS2 21.70848 1873 107.05 77.9686 24141 24141 24139 QEplus033719.raw F4 1873.8 1695.3 2081.1 1357.6 2241.3 1988.8 480 5.99 1 FALSE 1.14E-05 8.37E-14 2.581 -250 122346 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTVDEAVR [R].lTVDEAVR.[AK] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.2491 0 1 1 1 566.33069 1131.6541 1131.6571 -2.65 -0.0015 0/0 0 0 247074912 HCD 30 MS2 17.9196 867 5.7 77.9732 24143 24143 24139 QEplus033719.raw F4 861.9 724.6 927 738.5 971.9 977.9 257 2.69 2 FALSE 1.14E-05 0.0008029 0.681 -250 122356 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEVSELK [R].aEVSELk.[C] N-Term(TMT6plex); K7(TMT6plex) 2 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 A0A571BEU1; Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 0 2 2 0.2056 0 1 1 1 617.37677 1233.74626 1233.74547 0.64 0.00039 0/0 0 0 47508936 HCD 30 MS2 14.46698 1071.7 30.964 77.9754 24144 24144 24139 QEplus033719.raw F4 1131.1 1108.4 1082.3 680.1 1505.2 923.2 460 2.87 1 FALSE 0.0003496 0.006863 0.461 -250 122366 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIQCLQK [R].qIQcLQk.[T] N-Term(TMT6plex); C4(Carbamidomethyl); K7(TMT6plex) 5 Q3TYK4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1 Q8C3Z4; Q3TYK4; A2AI69; Q9DBC7; F8S0Y0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1; cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Mus musculus OX=10090 GN=Prkar1a PE=1 SV=1; cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Mus musculus OX=10090 GN=Prkar1a PE=1 SV=3; cAMP-dependent protein kinase type I-alpha regulatory subunit transcript variant 2 (Fragment) OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1 0 2 2 0.3562 0 1 1 1 688.41107 1375.81487 1375.81318 1.23 0.00085 0/0 0 0 24094890 HCD 30 MS2 28.36976 1245.8 110 77.9802 24146 24146 24139 QEplus033719.raw F4 1300.5 912.6 1405.4 1072.2 1293.8 1490.5 434 3.06 1 FALSE 0.0002909 0.005931 0.48 -250 122374 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SEYRELEDGGLER [K].sEYRELEDGGLER.[K] N-Term(TMT6plex) 3 E9PWK1 Epoxide hydrolase OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=1 F6YTS6; E9PWK1; Q9D379 Epoxide hydrolase 1 (Fragment) OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=2; Epoxide hydrolase OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=1; Epoxide hydrolase 1 OS=Mus musculus OX=10090 GN=Ephx1 PE=1 SV=2 1 3 3 0.6016 0 1 1 1 594.63361 1781.88626 1781.88672 -0.26 -0.00015 0/0 0 0 12422422 HCD 30 MS2 26.11267 982.6 110 77.9827 24147 24147 24139 QEplus033719.raw F4 898.2 899.9 1144.5 773.9 1162.5 1016.3 186 3.69 1 FALSE 1.14E-05 1.92E-07 1.373 -250 122389 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLDVVDTSK [R].rLDVVDTSk.[S] N-Term(TMT6plex); K9(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 1 3 3 0.6353 0 1 1 1 497.63675 1490.89569 1490.89426 0.96 0.00048 0/0 0 0 8078293.5 HCD 30 MS2 41.0258 951.9 110 77.9877 24149 24149 24139 QEplus033719.raw F4 1110.2 514.3 826.1 1112.2 844.9 1303.6 391 4.47 2 FALSE 1.14E-05 2.47E-06 1.163 -250 122402 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLFHGLAR [R].gLFHGLAR.[Q] N-Term(TMT6plex) 2 Q99N87 "28S ribosomal protein S5, mitochondrial OS=Mus musculus OX=10090 GN=Mrps5 PE=1 SV=1" Q3U2U4; Q99N87 "S5 DRBM domain-containing protein OS=Mus musculus OX=10090 GN=Mrps5 PE=2 SV=1; 28S ribosomal protein S5, mitochondrial OS=Mus musculus OX=10090 GN=Mrps5 PE=1 SV=1" 0 3 3 0.1373 0 1 1 1 367.22388 1099.65708 1099.65738 -0.27 -0.0001 0/0 0 0 9525704 HCD 30 MS2 22.23047 205.2 110 77.9975 24152 24152 24150 QEplus033719.raw F4 214.2 161.7 205.3 214 206.7 229.1 185 3.06 1 FALSE 1.14E-05 0.0008647 0.675 -250 122412 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLGEEHFK [K].dLGEEHFk.[G] N-Term(TMT6plex); K8(TMT6plex) 1 P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor 0 3 3 0.6989 0 1 1 1 478.26648 1432.78489 1432.78365 0.86 0.00041 0/0 0 0 50970396 HCD 30 MS2 45.38459 1102.9 26.212 78.002 24154 24154 24150 QEplus033719.raw F4 1099.8 545.9 808.4 613.1 2789 761.4 330 2.79 1 TRUE 1.14E-05 0.0001916 0.803 -250 122417 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HMLPSGFRK [K].hMLPSGFRk.[F] N-Term(TMT6plex); K9(TMT6plex) 2 P62911 60S ribosomal protein L32 OS=Mus musculus OX=10090 GN=Rpl32 PE=1 SV=2 Q5PR09; P62911 Ribosomal protein L32 OS=Mus musculus OX=10090 GN=Rpl32 PE=2 SV=1; 60S ribosomal protein L32 OS=Mus musculus OX=10090 GN=Rpl32 PE=1 SV=2 1 4 4 0.5929 0 1 1 1 383.47986 1530.8976 1530.89791 -0.2 -0.00008 0/0 0 0 38680808 HCD 30 MS2 4.788802 390.3 30.779 78.0043 24155 24155 24150 QEplus033719.raw F4 432.8 337.6 531.8 314.8 300.5 424.5 457 2.26 1 FALSE 0.0005076 0.007877 0.441 -250 122433 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KITDDQQESLNK [K].kITDDQQESLNk.[W] N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex) 5 P32067 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 P32067; Q3TG93; Q9CYB9; Q8BTU4; F6SXM5 Lupus La protein homolog OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; HTH La-type RNA-binding domain-containing protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ssb PE=2 SV=1; Lupus La protein homolog (Fragment) OS=Mus musculus OX=10090 GN=Ssb PE=1 SV=1 1 4 4 0.6474 0 1 1 1 527.3078 2106.20937 2106.20096 3.99 0.0021 0/0 0 0 16919496 HCD 30 MS2 23.94781 746 79.738 78.0088 24157 24157 24150 QEplus033719.raw F4 742.8 697.3 828.5 599.2 840 768.3 439 4.68 1 FALSE 1.14E-05 1.10E-05 1.04 -250 122441 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EASPNPEEGIIR [R].eASPNPEEGIIR.[A] N-Term(TMT6plex) 2 B2RXS4 Plexin-B2 OS=Mus musculus OX=10090 GN=Plxnb2 PE=1 SV=1 B2RXS4; Q8CHG6 Plexin-B2 OS=Mus musculus OX=10090 GN=Plxnb2 PE=1 SV=1; MKIAA0315 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0315 PE=3 SV=2 0 2 2 0.7117 0 1 1 1 770.91296 1540.81865 1540.81685 1.17 0.0009 0/0 0 0 3786965 HCD 30 MS2 0 254.4 110 78.0138 24159 24159 24150 QEplus033719.raw F4 263.8 214.5 288.7 210 267.9 281.4 318 4.44 1 FALSE 1.14E-05 9.18E-08 1.434 -250 122451 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTDGYLLR [K].tTDGYLLR.[L] N-Term(TMT6plex) 5 P97351 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3 Q3UJU5; P97351; Q3U5P8; Q3UAC2; Q9D1S3 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1 0 2 2 0.1355 0 1 1 1 584.33301 1167.65874 1167.6571 1.4 0.00082 0/0 0 0 20955606 HCD 30 MS2 8.101427 1137 110 78.0236 24162 24162 24161 QEplus033719.raw F4 1076.5 987.5 1333 1007.9 1188.4 1228.8 156 2.73 1 FALSE 0.0001603 0.00368 0.536 -250 122460 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDASTGDAIK [R].mDASTGDAIk.[T] N-Term(TMT6plex); K10(TMT6plex) 2 Q3TLE2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Fermt2 PE=1 SV=1 Q3UMA4; Q3TLE2 B41 domain-containing protein OS=Mus musculus OX=10090 GN=Fermt2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Fermt2 PE=1 SV=1 0 2 2 0.6287 0 1 1 1 733.90033 1466.79338 1466.7925 0.6 0.00044 0/0 0 0 17450694 HCD 30 MS2 6.597263 752.7 110 78.0262 24163 24163 24161 QEplus033719.raw F4 700.9 664.5 857.6 608.1 859.9 825 331 3.42 1 FALSE 1.14E-05 3.61E-08 1.511 -250 122467 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNKPPYPK [RK].vNkPPYPk.[L] N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex) 9 A0A1C7CYV0 Plastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1 Q3U9M7; Q3UKB1; A0A1C7CYV0; Q3TJX0; Q61233; B1AX58; Q3U6Z1; Q3UJG9; Q99K51 Uncharacterized protein OS=Mus musculus OX=10090 GN=Lcp1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pls3 PE=2 SV=1; Plastin-3 (Fragment) OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lcp1 PE=2 SV=1; Plastin-2 OS=Mus musculus OX=10090 GN=Lcp1 PE=1 SV=4; Plastin-3 OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lcp1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pls3 PE=2 SV=1; Plastin-3 OS=Mus musculus OX=10090 GN=Pls3 PE=1 SV=3 0 3 3 0.453 0 1 1 1 544.01508 1630.03067 1630.02952 0.71 0.00038 0/0 0 0 44636572 HCD 30 MS2 12.08935 1196 39.243 78.0284 24164 24164 24161 QEplus033719.raw F4 1211.6 1179.1 1467 872.2 1285.2 1161.2 174 2.87 1 FALSE 0.0006772 0.01004 0.404 -250 122475 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELSGTIK [R].eLSGTIk.[E] N-Term(TMT6plex); K7(TMT6plex) 2 Q5BLK0; Q8C2K0 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=1 SV=1;60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1 Q5BLK0; Q8C2K0 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=1 SV=1; 60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=2 SV=1 0 3 3 0.2177 0 1 1 1 402.5885 1205.75095 1205.75056 0.32 0.00013 0/0 0 0 23851152 HCD 30 MS2 20.77891 599.7 48.143 78.0307 24165 24165 24161 QEplus033719.raw F4 646 458.7 653.5 495 644.3 700.7 279 2.71 2 FALSE 0.0025 0.04929 0.144 -250 122484 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVPDAVGK [R].aAVPDAVGk.[C] N-Term(TMT6plex); K9(TMT6plex) 14 Q8VDN2 Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1 A0A0G2JGX4; Q3TXF9; Q8VDN2; Q6ZQ49; Q8VCE0; Q3UCH8; Q8R0E8; Q6PIC6; Q8R3M4; D3YYN7; Q8K2R2; Q8R0B0; Q3UHK5; Q8R3A9 Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a3 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a2 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a3 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a3 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-3 OS=Mus musculus OX=10090 GN=Atp1a3 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a2 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a3 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a2 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a2 PE=2 SV=1 0 2 2 0.7155 0 1 1 1 643.39734 1285.7874 1285.78801 -0.47 -0.0003 0/0 0 0 14691712 HCD 30 MS2 30.05153 1080.4 110 78.0332 24166 24166 24161 QEplus033719.raw F4 1098.1 883 1233.2 981.2 1081.2 1205.5 248 3.48 1 FALSE 1.14E-05 1.20E-06 1.222 -250 122492 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTLEPVEK [R].gTLEPVEk.[SA] N-Term(TMT6plex); K8(TMT6plex) 10 B7U582; P17879 Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1;Heat shock 70 kDa protein 1B OS=Mus musculus OX=10090 GN=Hspa1b PE=1 SV=3 Q9QWU1; Q61696; Q3TAI8; B7U582; A1E2B8; P16627; B2CSK2; P17879; Q91ZU4; P17156 Hsc70t (Fragment) OS=Mus musculus OX=10090 PE=3 SV=1; Heat shock 70 kDa protein 1A OS=Mus musculus OX=10090 GN=Hspa1a PE=1 SV=2; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Heat shock protein 70-2 OS=Mus musculus OX=10090 PE=3 SV=1; Inducible heat shock protein 70 OS=Mus musculus OX=10090 PE=3 SV=1; Heat shock 70 kDa protein 1-like OS=Mus musculus OX=10090 GN=Hspa1l PE=1 SV=4; Heat shock protein 1-like protein OS=Mus musculus OX=10090 PE=3 SV=1; Heat shock 70 kDa protein 1B OS=Mus musculus OX=10090 GN=Hspa1b PE=1 SV=3; Heat shock protein Hsc70t (Fragment) OS=Mus musculus OX=10090 GN=Hsc70t PE=3 SV=1; Heat shock-related 70 kDa protein 2 OS=Mus musculus OX=10090 GN=Hspa2 PE=1 SV=2 0 2 2 0.4268 0 1 1 1 665.90295 1330.79863 1330.79824 0.3 0.0002 0/0 0 0 13383878 HCD 30 MS2 18.66474 995.7 110 78.0357 24167 24167 24161 QEplus033719.raw F4 1012 956.3 1118.6 763.9 1142.7 980.7 458 3.14 2 FALSE 1.14E-05 0.0002058 0.797 -250 122496 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEVSELK [R].aEVSELk.[C] N-Term(TMT6plex); K7(TMT6plex) 2 Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 A0A571BEU1; Q6IRU2 Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=1; Tropomyosin alpha-4 chain OS=Mus musculus OX=10090 GN=Tpm4 PE=1 SV=3 0 3 3 0.048 0 1 1 1 411.9201 1233.74576 1233.74547 0.23 0.0001 0/0 0 0 8333745.5 HCD 30 MS2 39.65729 755.2 105.126 78.0381 24168 24168 24161 QEplus033719.raw F4 788.9 686.1 799.9 488.3 1009.1 758.8 460 2.29 1 FALSE 0.007163 0.1126 -0.026 -250 122502 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LYEQHLGK [K].lYEQHLGk.[S] N-Term(TMT6plex); K8(TMT6plex) 7 Q5SX40; Q5SX39 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1 Q5SX40; Q5SX39; G3UW82; Q3UUB1; B2RWX0; Q8BLW0; I6L963 "Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1" 0 2 2 0.5512 0 1 1 1 723.43011 1445.85295 1445.85167 0.89 0.00064 0/0 0 0 4914361.5 HCD 30 MS2 0 386.4 110 78.0406 24169 24169 24161 QEplus033719.raw F4 397.9 145.7 248.7 847 200.6 478.8 465 3.32 2 FALSE 1.14E-05 0.0001482 0.824 -250 122511 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TPCNAGTFSQPEK [R].tPcNAGTFSQPEk.[GVL] N-Term(TMT6plex); C3(Carbamidomethyl); K13(TMT6plex) 4 A0A140LHA2 Mitotic checkpoint protein BUB3 OS=Mus musculus OX=10090 GN=Bub3 PE=1 SV=1 A0A140LIM5; A0A140LHA2; A0A140LJ21; Q9WVA3 Mitotic checkpoint protein BUB3 OS=Mus musculus OX=10090 GN=Bub3 PE=1 SV=1; Mitotic checkpoint protein BUB3 OS=Mus musculus OX=10090 GN=Bub3 PE=1 SV=1; Mitotic checkpoint protein BUB3 (Fragment) OS=Mus musculus OX=10090 GN=Bub3 PE=1 SV=1; Mitotic checkpoint protein BUB3 OS=Mus musculus OX=10090 GN=Bub3 PE=1 SV=2 0 2 2 0.7354 0 1 1 1 947.98889 1894.97051 1894.97332 -1.48 -0.00141 0/0 0 0 4704753 HCD 30 MS2 0 267.8 110 78.0432 24170 24170 24161 QEplus033719.raw F4 279.5 257.5 309.5 197.9 310 252.4 237 4.12 1 FALSE 1.14E-05 3.80E-08 1.507 -250 122516 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CNTTVCLGK [R].cNTTVcLGk.[I] N-Term(TMT6plex); C1(Carbamidomethyl); C6(Carbamidomethyl); K9(TMT6plex) 5 R4H4V1 N-terminal kinase-like protein OS=Mus musculus OX=10090 GN=Scyl1 PE=1 SV=1 R4H4V1; Q9EQC5; A0A494BBD3; A0A494B997; R4H4Y7 N-terminal kinase-like protein OS=Mus musculus OX=10090 GN=Scyl1 PE=1 SV=1; N-terminal kinase-like protein OS=Mus musculus OX=10090 GN=Scyl1 PE=1 SV=1; N-terminal kinase-like protein (Fragment) OS=Mus musculus OX=10090 GN=Scyl1 PE=1 SV=1; N-terminal kinase-like protein (Fragment) OS=Mus musculus OX=10090 GN=Scyl1 PE=1 SV=1; N-terminal kinase-like protein OS=Mus musculus OX=10090 GN=Scyl1 PE=1 SV=1 0 2 2 0.6095 0 1 1 1 755.91089 1510.8145 1510.81219 1.53 0.00115 0/0 0 0 3457972.75 HCD 30 MS2 0 325.6 110 78.0457 24171 24171 24161 QEplus033719.raw F4 317.2 282.4 350 246.5 407.3 350.1 322 2.74 1 FALSE 1.14E-05 1.97E-05 0.991 -250 122531 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGEFSGANK [K].vGEFSGANk.[E] N-Term(TMT6plex); K9(TMT6plex) 1 P10639 Thioredoxin OS=Mus musculus OX=10090 GN=Txn PE=1 SV=3 P10639 Thioredoxin OS=Mus musculus OX=10090 GN=Txn PE=1 SV=3 0 3 3 0.6247 0 1 1 1 456.26248 1366.77289 1366.77309 -0.14 -0.00006 0/0 0 0 129559448 HCD 30 MS2 41.09081 561 9.034 78.0575 24175 24175 24172 QEplus033719.raw F4 537.4 531.2 697.6 425.5 439.5 734.9 411 3.65 1 FALSE 2.26E-05 0.001084 0.655 -250 122536 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVIFTQGR [R].tVIFTQGR.[D] N-Term(TMT6plex) 3 P55264 Adenosine kinase OS=Mus musculus OX=10090 GN=Adk PE=1 SV=2 P55264; P55264-2; Q8BWS6 Adenosine kinase OS=Mus musculus OX=10090 GN=Adk PE=1 SV=2; Isoform Short of Adenosine kinase OS=Mus musculus OX=10090 GN=Adk; PfkB domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Adk PE=2 SV=1 0 2 2 0.1169 0 1 1 1 575.84393 1150.68059 1150.67817 2.1 0.00121 0/0 0 0 25623220 HCD 30 MS2 54.43888 1067.2 41.969 78.0598 24176 24176 24172 QEplus033719.raw F4 1045.2 1097.2 1198.5 834.9 1164 1063.3 298 2.31 1 FALSE 1.14E-05 0.0002767 0.772 -250 122546 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLANQYK [K].vLANQYk.[S] N-Term(TMT6plex); K7(TMT6plex) 2 B9EIE9 Adenylosuccinate synthetase isozyme 2 OS=Mus musculus OX=10090 GN=Adss PE=1 SV=1 B9EIE9; Q8C909 Adenylosuccinate synthetase isozyme 2 OS=Mus musculus OX=10090 GN=Adss PE=1 SV=1; Adenylosuccinate synthetase OS=Mus musculus OX=10090 GN=Adss PE=2 SV=1 0 2 2 0.3639 0 1 1 1 647.40027 1293.79326 1293.79309 0.13 0.00008 0/0 0 0 19848500 HCD 30 MS2 15.02831 1127.2 110 78.0623 24177 24177 24172 QEplus033719.raw F4 1109.3 1143.1 1129.9 683 1759.6 938.5 319 3.16 1 FALSE 0.0002218 0.004712 0.508 -250 122563 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECIAGYTK [K].ecIAGYTk.[E] N-Term(TMT6plex); C2(Carbamidomethyl); K8(TMT6plex) 1 Q9CYA0 Protein disulfide isomerase Creld2 OS=Mus musculus OX=10090 GN=Creld2 PE=1 SV=1 Q9CYA0 Protein disulfide isomerase Creld2 OS=Mus musculus OX=10090 GN=Creld2 PE=1 SV=1 0 2 2 0.5768 0 1 1 1 700.38715 1399.76702 1399.76556 1.04 0.00073 0/0 0 0 13850555 HCD 30 MS2 18.72934 1015.9 110 78.0671 24179 24179 24172 QEplus033719.raw F4 1031 861.7 1092.2 876.8 1127.7 1106.1 295 2.67 1 FALSE 1.14E-05 0.000633 0.702 -250 122580 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGGTSDVEVNEKK [K].vGGTSDVEVNEkk.[D] N-Term(TMT6plex); K12(TMT6plex); K13(TMT6plex) 2 P63038 "60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" P63038-2; P63038 "Isoform 2 of 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1; 60 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspd1 PE=1 SV=1" 1 4 4 0.6959 0 1 1 1 513.05096 2049.18203 2049.1795 1.24 0.00063 0/0 0 0 4646438.5 HCD 30 MS2 41.40346 1145.6 110 78.0721 24181 24181 24172 QEplus033719.raw F4 1148.4 988.7 1338.4 989.8 1024.5 1383.7 439 4.34 1 FALSE 1.14E-05 0.0001302 0.835 -250 122592 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous INSADQEIK [K].iNSADQEIk.[S] N-Term(TMT6plex); K9(TMT6plex) 2 Q9DBZ1 Inhibitor of nuclear factor kappa-B kinase-interacting protein OS=Mus musculus OX=10090 GN=Ikbip PE=1 SV=2 Q9DBZ1; E9QMH7 Inhibitor of nuclear factor kappa-B kinase-interacting protein OS=Mus musculus OX=10090 GN=Ikbip PE=1 SV=2; Inhibitor of nuclear factor kappa-B kinase-interacting protein OS=Mus musculus OX=10090 GN=Ikbip PE=1 SV=1 0 2 2 0.0919 0 1 1 1 738.42767 1475.84807 1475.84698 0.74 0.00055 0/0 0 0 3697481.75 HCD 30 MS2 35.87352 440.4 110 78.0819 24184 24184 24183 QEplus033719.raw F4 439.5 375.9 478.7 402.8 462.8 482.6 490 2.72 1 FALSE 5.44E-05 0.002024 0.597 -250 122599 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKLEEHFK [K].akLEEHFk.[N] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 5 Q8BKC5 Importin-5 OS=Mus musculus OX=10090 GN=Ipo5 PE=1 SV=3 Q8BKC5-2; Q6NZC1; Q7TN23; Q3TT04; Q8BKC5 Isoform 2 of Importin-5 OS=Mus musculus OX=10090 GN=Ipo5; Ipo5 protein (Fragment) OS=Mus musculus OX=10090 GN=Ipo5 PE=2 SV=1; Ipo5 protein (Fragment) OS=Mus musculus OX=10090 GN=Ipo5 PE=2 SV=1; Importin N-terminal domain-containing protein OS=Mus musculus OX=10090 GN=Ipo5 PE=2 SV=1; Importin-5 OS=Mus musculus OX=10090 GN=Ipo5 PE=1 SV=3 1 4 4 0.5061 0 1 1 1 423.01346 1689.032 1689.03025 1.04 0.00044 0/0 0 0 20649276 HCD 30 MS2 19.79204 717.8 68.662 78.0842 24185 24185 24183 QEplus033719.raw F4 600.7 666.8 894.3 498.6 723.8 922.6 330 3.26 1 FALSE 1.14E-05 4.37E-05 0.926 -250 122607 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGVVGPELHEK [K].aGVVGPELHEk.[L] N-Term(TMT6plex); K11(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.7073 0 1 1 1 531.98395 1593.93729 1593.93646 0.52 0.00028 0/0 0 0 50781872 HCD 30 MS2 46.36508 869.8 35.203 78.0864 24186 24186 24183 QEplus033719.raw F4 934.8 748.1 923.2 738 921.4 953.5 489 5.09 2 FALSE 1.14E-05 7.29E-10 1.833 -250 122630 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVSQAVEHINK [K].gVSQAVEHINk.[T] N-Term(TMT6plex); K11(TMT6plex) 3 Q5FW97 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1 Q8CF78; Q5FW97; B1ARR7 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; Alpha-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 0 3 3 0.269 0 1 1 1 547.32043 1639.94675 1639.95318 -3.92 -0.00214 0/0 0 0 12582179 HCD 30 MS2 13.87922 996.1 110 78.0934 24189 24189 24183 QEplus033719.raw F4 1028.2 864.9 1069.5 872 1085.2 1057 387 4.61 1 FALSE 1.14E-05 6.67E-09 1.651 -250 122642 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAVPDAVGK [R].aAVPDAVGk.[C] N-Term(TMT6plex); K9(TMT6plex) 14 Q8VDN2 Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1 A0A0G2JGX4; Q3TXF9; Q8VDN2; Q6ZQ49; Q8VCE0; Q3UCH8; Q8R0E8; Q6PIC6; Q8R3M4; D3YYN7; Q8K2R2; Q8R0B0; Q3UHK5; Q8R3A9 Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a3 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Mus musculus OX=10090 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a2 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a3 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a3 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-3 OS=Mus musculus OX=10090 GN=Atp1a3 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a2 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a1 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a3 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha OS=Mus musculus OX=10090 GN=Atp1a2 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha (Fragment) OS=Mus musculus OX=10090 GN=Atp1a2 PE=2 SV=1 0 3 3 0.6336 0 1 1 1 429.26743 1285.78772 1285.78801 -0.22 -0.00009 0/0 0 0 9227661 HCD 30 MS2 37.42635 685.9 110 78.0984 24191 24191 24183 QEplus033719.raw F4 715.1 512.3 760.5 650.1 682 795.3 248 2.62 1 FALSE 0.001506 0.02226 0.263 -250 122652 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAQPSITDNK [K].vAQPSITDNk.[D] N-Term(TMT6plex); K10(TMT6plex) 7 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; I7HPX4; B7FAV1; F6Z2C0; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=4 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=8; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.4815 0 1 1 1 765.94958 1530.89189 1530.88918 1.77 0.00136 0/0 0 0 8851194 HCD 30 MS2 0 581.6 110 78.1009 24192 24192 24183 QEplus033719.raw F4 608.7 559.3 621.3 408.1 739 553.5 472 3.51 1 FALSE 1.14E-05 4.41E-08 1.495 -250 122669 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QIQCLQK [R].qIQcLQk.[T] N-Term(TMT6plex); C4(Carbamidomethyl); K7(TMT6plex) 5 Q3TYK4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1 Q8C3Z4; Q3TYK4; A2AI69; Q9DBC7; F8S0Y0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1; cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Mus musculus OX=10090 GN=Prkar1a PE=1 SV=1; cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Mus musculus OX=10090 GN=Prkar1a PE=1 SV=3; cAMP-dependent protein kinase type I-alpha regulatory subunit transcript variant 2 (Fragment) OS=Mus musculus OX=10090 GN=Prkar1a PE=2 SV=1 0 3 3 0.3301 0 1 1 1 459.27582 1375.8129 1375.81318 -0.2 -0.00009 0/0 0 0 17589098 HCD 30 MS2 28.88545 752.7 109.329 78.1107 24195 24195 24194 QEplus033719.raw F4 745.7 560.3 853.2 667.1 769.5 920.5 447 3.12 1 FALSE 0.0008805 0.01227 0.369 -250 122676 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AKMEDTLK [R].akMEDTLk.[R] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 Q9CZD3 Glycine--tRNA ligase OS=Mus musculus OX=10090 GN=Gars1 PE=1 SV=1 1 3 3 0.5329 0 1 1 1 541.66388 1622.97708 1622.97544 1.01 0.00055 0/0 0 0 9373136 HCD 30 MS2 42.26797 1074.2 110 78.1133 24196 24196 24194 QEplus033719.raw F4 959 1087.3 1266 1028.1 1029.6 1074.9 355 2.89 1 FALSE 1.14E-05 0.0005795 0.71 -250 122683 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAQPSITDNK [K].vAQPSITDNk.[D] N-Term(TMT6plex); K10(TMT6plex) 7 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; I7HPX4; B7FAV1; F6Z2C0; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=4 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=8; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.1039 0 1 1 1 510.9697 1530.89453 1530.88918 3.5 0.00179 0/0 0 0 32199560 HCD 30 MS2 21.42155 1136.2 52.348 78.1155 24197 24197 24194 QEplus033719.raw F4 1234.2 906.7 1403.9 820.9 1119.3 1332.1 441 3.37 1 FALSE 0.00124 0.01677 0.312 -250 122691 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVGFNPK [K].kVGFNPk.[K] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 5 Q8CCV1 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Gspt1 PE=2 SV=1 Q8CCV1; Q3UL02; Q8BPH0; Q8R050; Q8R050-2 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Gspt1 PE=2 SV=1; Tr-type G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gspt1 PE=2 SV=1; Tr-type G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gspt1 PE=2 SV=1; Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus OX=10090 GN=Gspt1 PE=1 SV=2; Isoform 2 of Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus OX=10090 GN=Gspt1 1 3 3 0.3621 0 1 1 1 492.9884 1476.95066 1476.95055 0.08 0.00004 0/0 0 0 18736232 HCD 30 MS2 25.66801 1387 102.509 78.1179 24198 24198 24194 QEplus033719.raw F4 1526.1 1221.4 1455.2 1094.6 1562.1 1462.8 214 2.9 1 FALSE 0.0001603 0.003665 0.537 -250 122700 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDGEKPVDASEEK [K].mDGEkPVDASEEk.[R] N-Term(TMT6plex); K5(TMT6plex); K13(TMT6plex) 3 Q9D0R2 "Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2" Q3U630; Q9D0R2; A0A2I3BPK8 "Threonyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1; Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2; Threonyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Tars PE=1 SV=1" 0 3 3 0.6993 0 1 1 1 708.04865 2122.13138 2122.1305 0.42 0.0003 0/0 0 0 17141550 HCD 30 MS2 28.00963 1233.2 110 78.1204 24199 24199 24194 QEplus033719.raw F4 1449.3 1085.2 1367.6 1088.1 1140.2 1269 357 2.86 1 FALSE 1.14E-05 7.67E-09 1.639 -250 122712 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVEMEQK [K].vVEMEQk.[R] N-Term(TMT6plex); K7(TMT6plex) 7 A0A571BF58 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 E9Q1W3; A0A571BF58; F6X9B6; Q9JL90; A0A571BF46; A2AQB2; A2AQA9 Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1; Nebulin OS=Mus musculus OX=10090 GN=Neb PE=1 SV=1 0 2 2 0.4048 0 1 1 1 660.88409 1320.76091 1320.75974 0.88 0.00058 0/0 0 0 8934327 HCD 30 MS2 24.26793 1066.9 110 78.1254 24201 24201 24194 QEplus033719.raw F4 1116.5 543.5 1058.7 1383.7 693.5 1605.7 514 2.94 1 FALSE 0.0002218 0.004689 0.509 -250 122719 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYPTIK [R].gYPTIk.[FL] N-Term(TMT6plex); K6(TMT6plex) 15 P09103; Q8BXZ1 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2;Protein disulfide-isomerase TMX3 OS=Mus musculus OX=10090 GN=Tmx3 PE=1 SV=2 P09103; Q8BXZ1; Q3URP6; Q3TWE3; A0A494BB11; Q3U738; Q3TT76; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; Q3UA23; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase TMX3 OS=Mus musculus OX=10090 GN=Tmx3 PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase TMX3 OS=Mus musculus OX=10090 GN=Tmx3 PE=1 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 0 3 3 0.4286 0 1 1 1 379.57401 1136.70746 1136.70797 -0.44 -0.00017 0/0 0 0 7432303.5 HCD 30 MS2 27.94618 525.7 110 78.1279 24202 24202 24194 QEplus033719.raw F4 463.2 474.8 655.5 426.5 557.4 577 136 2.24 2 FALSE 0.009694 0.1882 -0.124 -250 122720 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYPTLK [R].gYPTLk.[FL] N-Term(TMT6plex); K6(TMT6plex) 5 E9PXX7 Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=1 E9PXX7; Q3UBW8; Q91W90; A0A0R4J1Y7; Q3UWX1 Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Txndc5 PE=2 SV=1; Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=2; Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Txndc5 PE=2 SV=1 0 3 3 0.4286 0 1 2 2 379.57401 1136.70746 1136.70797 -0.44 -0.00017 0/0 0 0 7432303.5 HCD 30 MS2 27.94618 525.7 110 78.1279 24202 24202 24194 QEplus033719.raw F4 463.2 474.8 655.5 426.5 557.4 577 136 2.24 1 FALSE 0.009694 0.1882 -0.124 -250 122728 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MLQDGCELR [R].mLQDGcELR.[I] N-Term(TMT6plex); C6(Carbamidomethyl) 2 Q7TMF2 3'-5' exoribonuclease 1 OS=Mus musculus OX=10090 GN=Eri1 PE=1 SV=2 Q7TMF2; A0A0R4J0C8 3'-5' exoribonuclease 1 OS=Mus musculus OX=10090 GN=Eri1 PE=1 SV=2; 3'-5' exoribonuclease 1 OS=Mus musculus OX=10090 GN=Eri1 PE=1 SV=1 0 2 2 0.6419 0 1 1 1 675.83807 1350.66887 1350.67072 -1.37 -0.00093 0/0 0 0 3022879.25 HCD 30 MS2 17.61579 483.4 110 78.1304 24203 24203 24194 QEplus033719.raw F4 465.3 410.4 497.7 380.1 632 514.7 109 3.63 1 FALSE 1.14E-05 0.0002392 0.784 -250 122739 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCSGVEFSTSGSSNTDTGK [K].scSGVEFSTSGSSNTDTGk.[V] N-Term(TMT6plex); C2(Carbamidomethyl); K19(TMT6plex) 5 G3UX26 Outer mitochondrial membrane protein porin 2 OS=Mus musculus OX=10090 GN=Vdac2 PE=1 SV=1 A0A286YCR8; D3YZT5; G3UX26; D3YUN8; Q60930 Outer mitochondrial membrane protein porin 2 (Fragment) OS=Mus musculus OX=10090 GN=Vdac2 PE=1 SV=1; Outer mitochondrial membrane protein porin 2 (Fragment) OS=Mus musculus OX=10090 GN=Vdac2 PE=1 SV=1; Outer mitochondrial membrane protein porin 2 OS=Mus musculus OX=10090 GN=Vdac2 PE=1 SV=1; Outer mitochondrial membrane protein porin 2 (Fragment) OS=Mus musculus OX=10090 GN=Vdac2 PE=1 SV=1; Voltage-dependent anion-selective channel protein 2 OS=Mus musculus OX=10090 GN=Vdac2 PE=1 SV=2 0 3 3 0.875 0 1 1 1 789.37799 2366.11942 2366.1182 0.51 0.0004 0/0 0 0 18731352 HCD 30 MS2 0 268.1 110 78.1402 24206 24206 24205 QEplus033719.raw F4 275.2 215.1 330.6 264.6 182.7 340.4 96 7.84 1 FALSE 1.14E-05 6.31E-16 3.194 -250 122752 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILGEDSSK [K].iLGEDSSk.[N] N-Term(TMT6plex); K8(TMT6plex) 12 F8WIV2 "Serine (or cysteine) peptidase inhibitor, clade B, member 6a OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1" E9Q0P9; Q8BZR2; E9PYY0; E9Q108; E9PZQ9; E9Q3Y1; K7E6F1; E9Q6X2; E9Q4R2; F8WIV2; Q4FJQ6; Q3U3L3 "Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; SERPIN domain-containing protein OS=Mus musculus OX=10090 GN=Serpinb6a PE=2 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=8; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=8; Serine (or cysteine) peptidase inhibitor, clade B, member 6a OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serpinb6a protein OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; SERPIN domain-containing protein OS=Mus musculus OX=10090 GN=Serpinb6a PE=2 SV=1" 0 2 2 0.5356 0 1 1 1 653.88446 1306.76164 1306.76185 -0.16 -0.0001 0/0 0 0 34709904 HCD 30 MS2 11.01083 924.2 63.495 78.145 24208 24208 24205 QEplus033719.raw F4 933.4 853.5 914.4 834.9 1087 922 423 2.67 1 FALSE 1.14E-05 0.0002852 0.77 -250 122771 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQDYEQK [R].lQDYEQk.[T] N-Term(TMT6plex); K7(TMT6plex) 5 Q4KML7 Ezrin OS=Mus musculus OX=10090 GN=Ezr PE=1 SV=1 Q8CBU4; Q3UXR4; Q4KML7; Q3TCP5; Q3UL48 FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; Ezrin OS=Mus musculus OX=10090 GN=Ezr PE=1 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Ezr PE=2 SV=1 0 2 2 0.3823 0 1 1 1 691.39154 1381.7758 1381.77275 2.21 0.00153 0/0 0 0 9767184 HCD 30 MS2 34.62659 980.8 110 78.152 24211 24211 24205 QEplus033719.raw F4 970.5 915.3 1109.1 915.4 948.5 1025.8 366 2.93 1 FALSE 0.0002119 0.004355 0.518 -250 122780 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLGEEHFK [K].dLGEEHFk.[G] N-Term(TMT6plex); K8(TMT6plex) 1 P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor P02769 SWISS-PROT:P02769 (Bos taurus) Bovine serum albumin precursor 0 2 2 0.5709 0 1 1 1 716.89557 1432.78386 1432.78365 0.15 0.00011 0/0 0 0 9106772 HCD 30 MS2 0 606.1 110 78.1545 24212 24212 24205 QEplus033719.raw F4 630.2 218.8 360.4 284 1776.8 366.5 320 2.82 1 TRUE 0.0006294 0.009559 0.412 -250 122789 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMYEEEINETR [K].nMYEEEINETR.[R] N-Term(TMT6plex) 2 P14733 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3 P14733; Q8C553 Lamin-B1 OS=Mus musculus OX=10090 GN=Lmnb1 PE=1 SV=3; IF rod domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Lmnb1 PE=2 SV=1 0 2 2 0.8291 0 1 1 1 828.8913 1656.77532 1656.77367 1 0.00082 0/0 0 0 6341887 HCD 30 MS2 0 486.7 110 78.1571 24213 24213 24205 QEplus033719.raw F4 463.5 559 531.3 297.2 684.4 384.5 58 4.68 1 FALSE 1.14E-05 9.19E-09 1.624 -250 122794 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLQLAIR [R].hLQLAIR.[NG] N-Term(TMT6plex) 17 Q149V4; Q8BFU2; Q3THW5; P27661 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1;Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3;Histone H2A.V OS=Mus musculus OX=10090 GN=H2az2 PE=1 SV=3;Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2 Q149V4; Q8BFU2; Q3THW5; C0HKE5; P0C0S6; Q8CGP5; A0AUV1; Q8CGP4; Q3TFU6; Q8R1M2; Q8R029; P27661; A0A0N4SV66; Q64426; Q8CGP7; Q8CGP6; Q6GSS7 Histone H2A OS=Mus musculus OX=10090 GN=H2ac20 PE=2 SV=1; Histone H2A type 3 OS=Mus musculus OX=10090 GN=H2aw PE=1 SV=3; Histone H2A.V OS=Mus musculus OX=10090 GN=H2az2 PE=1 SV=3; Histone H2A type 1-G OS=Mus musculus OX=10090 GN=H2ac11 PE=1 SV=1; Histone H2A.Z OS=Mus musculus OX=10090 GN=H2az1 PE=1 SV=2; Histone H2A type 1-F OS=Mus musculus OX=10090 GN=Hist1h2af PE=1 SV=3; Histone H2A (Fragment) OS=Mus musculus OX=10090 GN=H2ac12 PE=2 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2ac1 PE=1 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2az1 PE=2 SV=1; Histone H2A.J OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A OS=Mus musculus OX=10090 GN=H2az2 PE=2 SV=1; Histone H2AX OS=Mus musculus OX=10090 GN=H2ax PE=1 SV=2; Histone H2A OS=Mus musculus OX=10090 GN=H2aj PE=1 SV=1; Histone H2A (Fragment) OS=Mus musculus domesticus OX=10092 GN=H2A PE=2 SV=1; Histone H2A type 1-K OS=Mus musculus OX=10090 GN=H2ac15 PE=1 SV=3; Histone H2A type 1-H OS=Mus musculus OX=10090 GN=H2ac12 PE=1 SV=3; Histone H2A type 2-A OS=Mus musculus OX=10090 GN=Hist2h2aa1 PE=1 SV=3 0 3 3 0.1931 0 1 1 1 360.56763 1079.68833 1079.68868 -0.33 -0.00012 0/0 0 0 7304593 HCD 30 MS2 45.05567 211 110 78.1596 24214 24214 24205 QEplus033719.raw F4 190.3 197.7 248.7 148.8 213.7 266.7 16 3.21 4 FALSE 1.14E-05 0.0004528 0.731 -250 122807 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQEIPQK [K].vQEIPQk.[E] N-Term(TMT6plex); K7(TMT6plex) 1 Q8K0C9 "GDP-mannose 4,6 dehydratase OS=Mus musculus OX=10090 GN=Gmds PE=1 SV=1" Q8K0C9 "GDP-mannose 4,6 dehydratase OS=Mus musculus OX=10090 GN=Gmds PE=1 SV=1" 0 2 2 0.5245 0 1 1 1 650.40509 1299.8029 1299.80366 -0.58 -0.00038 0/0 0 0 18771594 HCD 30 MS2 39.59725 861.2 60.054 78.1691 24217 24217 24216 QEplus033719.raw F4 798 742 1023.2 792 790.3 1021.8 227 2.65 1 FALSE 0.0006035 0.008895 0.423 -250 122815 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQEIPQK [K].vQEIPQk.[E] N-Term(TMT6plex); K7(TMT6plex) 1 Q8K0C9 "GDP-mannose 4,6 dehydratase OS=Mus musculus OX=10090 GN=Gmds PE=1 SV=1" Q8K0C9 "GDP-mannose 4,6 dehydratase OS=Mus musculus OX=10090 GN=Gmds PE=1 SV=1" 0 3 3 0.4036 0 1 1 1 433.93964 1299.80436 1299.80366 0.54 0.00023 0/0 0 0 14951121 HCD 30 MS2 18.64866 604.8 67.446 78.1714 24218 24218 24216 QEplus033719.raw F4 610.7 472 683 545.5 583.2 734.5 234 2.75 1 FALSE 0.001248 0.01696 0.31 -250 122823 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IASDGLK [K].iASDGLk.[G] N-Term(TMT6plex); K7(TMT6plex) 5 P97351 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3 Q3UJU5; P97351; Q3U5P8; Q3UAC2; Q9D1S3 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a PE=1 SV=3; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1; 40S ribosomal protein S3a OS=Mus musculus OX=10090 GN=Rps3a1 PE=2 SV=1 0 2 2 0.2757 0 1 1 1 581.36609 1161.7249 1161.72434 0.48 0.00028 0/0 0 0 131793912 HCD 30 MS2 34.86745 959.6 10.688 78.1737 24219 24219 24216 QEplus033719.raw F4 883.8 759.5 1077.7 815.6 1087.4 1133.6 517 2.43 1 FALSE 0.0006294 0.009609 0.411 -250 122833 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVLCGTCGQPADK [R].tVLcGTcGQPADk.[A] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl); K13(TMT6plex) 2 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 Q8BNX5; P48678 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 0 3 3 0.735 0 1 1 1 622.32733 1864.96744 1864.96613 0.71 0.00044 0/0 0 0 43902796 HCD 30 MS2 5.237459 531 44.653 78.176 24220 24220 24216 QEplus033719.raw F4 612.3 474.4 570.6 393.9 631.1 503.7 291 4.68 1 FALSE 1.14E-05 4.35E-09 1.686 -250 122850 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVGIVGK [K].kVGIVGk.[Y] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 5 Q5M9N6 Rpl37a protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1 Q5M9N6; Q4VAF2; Q9CYW3; Q3U8M3; Q3TLC1 Rpl37a protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1; Ribosomal protein L37a OS=Mus musculus OX=10090 GN=Rpl37a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1 1 3 3 0.4667 0 1 1 1 463.32504 1387.96057 1387.96038 0.14 0.00006 0/0 0 0 21185268 HCD 30 MS2 54.22824 1589.9 73.654 78.1805 24222 24222 24216 QEplus033719.raw F4 1771.4 1363.4 1718.7 1290 1630.8 1765.1 70 2.85 1 FALSE 0.00079 0.01091 0.39 -250 122860 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVLCGTCGQPADK [R].tVLcGTcGQPADk.[A] N-Term(TMT6plex); C4(Carbamidomethyl); C7(Carbamidomethyl); K13(TMT6plex) 2 P48678 Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 Q8BNX5; P48678 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Prelamin-A/C OS=Mus musculus OX=10090 GN=Lmna PE=1 SV=2 0 2 2 0.6933 0 1 1 1 932.98749 1864.9677 1864.96613 0.84 0.00079 0/0 0 0 18139726 HCD 30 MS2 8.648993 620.3 110 78.183 24223 24223 24216 QEplus033719.raw F4 716 549.4 664.3 454.5 748.4 588.9 293 4.89 1 FALSE 1.14E-05 6.59E-13 2.411 -250 122867 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IPAGLENR [R].iPAGLENR.[L] N-Term(TMT6plex) 1 Q3UNI8 D-dopachrome tautomerase OS=Mus musculus OX=10090 GN=Ddt PE=1 SV=1 Q3UNI8 D-dopachrome tautomerase OS=Mus musculus OX=10090 GN=Ddt PE=1 SV=1 0 2 2 0.1698 0 1 1 1 549.82758 1098.64787 1098.64687 0.91 0.0005 0/0 0 0 14717308 HCD 30 MS2 24.64808 1081.6 110 78.1855 24224 24224 24216 QEplus033719.raw F4 980 1026.8 1142.6 866.7 1284.9 1188.5 147 2.12 1 FALSE 0.0005848 0.008744 0.426 -250 122883 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVSQAVEHINK [K].gVSQAVEHINk.[T] N-Term(TMT6plex); K11(TMT6plex) 3 Q5FW97 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1 Q8CF78; Q5FW97; B1ARR7 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; Alpha-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 0 2 2 0.7161 0 1 1 1 820.47974 1639.9522 1639.95318 -0.6 -0.00049 0/0 0 0 5091376 HCD 30 MS2 15.25122 516 110 78.1905 24226 24226 24216 QEplus033719.raw F4 709.5 463.7 498.4 431.5 578.6 414.4 377 4.72 1 FALSE 1.14E-05 4.34E-10 1.876 -250 122886 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETLVTPSSK [K].eTLVTPSSk.[K] N-Term(TMT6plex); K9(TMT6plex) 1 P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" P70670 "Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus OX=10090 GN=Naca PE=1 SV=2" 0 2 2 0.5686 0 1 1 1 710.42688 1419.84648 1419.84592 0.4 0.00028 0/0 0 0 12292737 HCD 30 MS2 34.79378 803.1 110 78.1979 24228 24228 24227 QEplus033719.raw F4 842.7 409.5 846.5 1026.1 475.1 1218.4 422 2.99 1 FALSE 1.14E-05 0.0001224 0.84 -250 122892 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AGVVGPELHEK [K].aGVVGPELHEk.[L] N-Term(TMT6plex); K11(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.6733 0 1 1 1 797.47162 1593.93596 1593.93646 -0.31 -0.00025 0/0 0 0 7343865.5 HCD 30 MS2 0 346.3 110 78.2004 24229 24229 24227 QEplus033719.raw F4 364.2 296.9 380.7 317.8 323.8 394.6 485 4.04 2 FALSE 1.14E-05 2.11E-06 1.176 -250 122899 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTVLLSGPR [R].gTVLLSGPR.[K] N-Term(TMT6plex) 6 P35980 60S ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=3 A0A1B0GSS8; Q642K1; A0A1B0GQU8; Q0QEW9; A0A1B0GSF7; P35980 60S ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=1; Ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=2 SV=1; 60S ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=1; Ribosomal protein L18 (Fragment) OS=Mus musculus OX=10090 GN=Rpl18 PE=2 SV=1; 60S ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=1; 60S ribosomal protein L18 OS=Mus musculus OX=10090 GN=Rpl18 PE=1 SV=3 0 2 2 0.6611 0 1 1 1 564.85107 1128.69487 1128.69382 0.93 0.00052 0/0 0 0 95943464 HCD 30 MS2 21.0343 680.1 15.179 78.2027 24230 24230 24227 QEplus033719.raw F4 705.9 610 781.2 622.3 612.2 749.1 241 3.01 1 FALSE 1.14E-05 6.63E-05 0.891 -250 122906 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGEFCIAK [R].rGEFcIAk.[F] N-Term(TMT6plex); C5(Carbamidomethyl); K8(TMT6plex) 4 Q78PY7 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1 Q78PY7; Q3UZI3; Q3TW51; Q3TRW3 Staphylococcal nuclease domain-containing protein 1 OS=Mus musculus OX=10090 GN=Snd1 PE=1 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1; Staphylococcal nuclease domain-containing protein OS=Mus musculus OX=10090 GN=Snd1 PE=2 SV=1 1 3 3 0.4876 0 1 1 1 480.27969 1438.82453 1438.82408 0.31 0.00015 0/0 0 0 71939384 HCD 30 MS2 31.76011 1027.8 21.626 78.2049 24231 24231 24227 QEplus033719.raw F4 1020.7 914.4 1167.2 822.6 1145.5 1096.7 359 3.63 1 FALSE 1.14E-05 0.0001758 0.81 -250 122914 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VMGEVGK [R].vMGEVGk.[T] N-Term(TMT6plex); K7(TMT6plex) 5 Q3V117; Q91V92 ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1;ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 Q3TS02; Q3TED3; Q3UEA1; Q3V117; Q91V92 ATP citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate (pro-S-)-lyase (Fragment) OS=Mus musculus OX=10090 GN=Acly PE=2 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1; ATP-citrate synthase OS=Mus musculus OX=10090 GN=Acly PE=1 SV=1 0 2 2 0.5478 0 1 1 1 589.35468 1177.70207 1177.7015 0.49 0.00029 0/0 0 0 55673660 HCD 30 MS2 36.8633 1323 29.871 78.2072 24232 24232 24227 QEplus033719.raw F4 1299.9 804.1 1201.2 1873.1 979.3 1780.5 395 2.3 2 FALSE 0.00171 0.02856 0.224 -250 122922 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QMNPYIQVTSHQNR [R].qMNPYIQVTSHQNR.[V] N-Term(TMT6plex) 2 A0A1S6GWH5 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1 A0A1S6GWH5; Q02053 Ubiquitin-activating enzyme E1 OS=Mus musculus OX=10090 GN=Uba1 PE=2 SV=1; Ubiquitin-like modifier-activating enzyme 1 OS=Mus musculus OX=10090 GN=Uba1 PE=1 SV=1 0 3 3 0.7826 0 1 1 1 649.00201 1944.99149 1944.99114 0.18 0.00011 0/0 0 0 22018754 HCD 30 MS2 2.411941 397.8 110 78.2097 24233 24233 24227 QEplus033719.raw F4 400.4 355.7 438.8 321.3 463.8 406.7 241 6.21 1 FALSE 1.14E-05 2.68E-14 2.675 -250 122928 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DFNSMKK [K].dFNSMkk.[Y] N-Term(TMT6plex); K6(TMT6plex); K7(TMT6plex) 6 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB90; Q3U9L3; Q3T9U9; A0A087WQK0; P27659 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 (Fragment) OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3 1 3 3 0.4856 0 1 1 1 519.64075 1556.90769 1556.90736 0.21 0.00011 0/0 0 0 14320483 HCD 30 MS2 6.243354 1666.8 110 78.2122 24234 24234 24227 QEplus033719.raw F4 1884.3 1527.9 1838.6 1281.1 1809 1659.6 366 2.08 1 FALSE 0.001108 0.01461 0.338 -250 122946 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLVQNAAGSQEK [K].vLVQNAAGSQEk.[L] N-Term(TMT6plex); K12(TMT6plex) 5 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q0V930; Q3UHS6; Q3TBC3; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.6031 0 1 1 1 851.49945 1701.99162 1701.98995 0.98 0.00084 0/0 0 0 6516650.5 HCD 30 MS2 0 433 110 78.2172 24236 24236 24227 QEplus033719.raw F4 453 406.8 477.9 334 526.6 399.6 413 4.56 1 FALSE 1.14E-05 8.04E-12 2.205 -250 122972 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAQQYSEALASTR [R].eAQQYSEALASTR.[I] N-Term(TMT6plex) 1 Q9CYL5 Golgi-associated plant pathogenesis-related protein 1 OS=Mus musculus OX=10090 GN=Glipr2 PE=1 SV=3 Q9CYL5 Golgi-associated plant pathogenesis-related protein 1 OS=Mus musculus OX=10090 GN=Glipr2 PE=1 SV=3 0 2 2 0.8316 0 1 1 1 841.9317 1682.85613 1682.85469 0.85 0.00072 0/0 0 0 3850885.75 HCD 30 MS2 0 272 110 78.2296 24240 24240 24238 QEplus033719.raw F4 231.9 283.2 315.4 179.9 308.7 312.8 206 4.81 1 FALSE 1.14E-05 2.28E-11 2.119 -250 122975 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGTQYLLR [K].tGTQYLLR.[T] N-Term(TMT6plex) 10 F8WIV2 "Serine (or cysteine) peptidase inhibitor, clade B, member 6a OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1" E9Q0P9; Q8BZR2; E9PYY0; E9Q108; E9Q3Y1; K7E6F1; E9Q6X2; F8WIV2; Q4FJQ6; Q3U3L3 "Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; SERPIN domain-containing protein OS=Mus musculus OX=10090 GN=Serpinb6a PE=2 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=8; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serpinb6a protein OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; SERPIN domain-containing protein OS=Mus musculus OX=10090 GN=Serpinb6a PE=2 SV=1" 0 2 2 0.4691 0 1 1 1 590.84857 1180.68987 1180.68874 0.96 0.00056 0/0 0 0 75131064 HCD 30 MS2 22.95646 746.6 14.797 78.2319 24241 24241 24238 QEplus033719.raw F4 750.8 636.7 791.3 740.7 768.1 792.1 291 2.75 1 FALSE 1.14E-05 0.000432 0.735 -250 122985 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YICQVK [K].yIcQVk.[N] N-Term(TMT6plex); C3(Carbamidomethyl); K6(TMT6plex) 5 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; E9Q8N1; F7CR78 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.428 0 1 1 1 634.87549 1268.7437 1268.7437 0 0 0/0 0 0 19169070 HCD 30 MS2 12.9631 1439.6 110 78.2366 24243 24243 24238 QEplus033719.raw F4 1613.4 631.5 1359.9 2154.8 749 2128.8 283 2.57 2 FALSE 0.003928 0.07327 0.079 -250 123002 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FAEGEATLR [K].fAEGEATLR.[M] N-Term(TMT6plex) 4 Q8BML9 Glutamine--tRNA ligase OS=Mus musculus OX=10090 GN=Qars1 PE=1 SV=1 Q8R1V9; D3Z158; Q3TIN2; Q8BML9 Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=1 SV=2; Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=2 SV=1; Glutamine--tRNA ligase OS=Mus musculus OX=10090 GN=Qars1 PE=1 SV=1 0 2 2 0.5292 0 1 1 1 611.83466 1222.66203 1222.66292 -0.72 -0.00044 0/0 0 0 10573691 HCD 30 MS2 42.71725 1239.3 110 78.2442 24246 24246 24238 QEplus033719.raw F4 1127.4 1002.3 1324.1 1121.2 1355.5 1505.4 278 2.91 1 FALSE 1.14E-05 0.0001176 0.844 -250 123017 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EENCAILK [K].eENcAILk.[E] N-Term(TMT6plex); C4(Carbamidomethyl); K8(TMT6plex) 2 A0A0R4IZY0 Thimet oligopeptidase OS=Mus musculus OX=10090 GN=Thop1 PE=1 SV=1 A0A0R4IZY0; Q8C1A5 Thimet oligopeptidase OS=Mus musculus OX=10090 GN=Thop1 PE=1 SV=1; Thimet oligopeptidase OS=Mus musculus OX=10090 GN=Thop1 PE=1 SV=1 0 2 2 0.0814 0 1 1 1 717.90387 1434.80046 1434.80267 -1.54 -0.0011 0/0 0 0 8173538 HCD 30 MS2 30.47887 750.5 110 78.2492 24248 24248 24238 QEplus033719.raw F4 819.8 361.6 658.2 563.5 1251.9 847.7 433 2.58 1 FALSE 1.14E-05 0.0003053 0.764 -250 123023 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MDSTEPPYSQK [K].mDSTEPPYSQk.[R] N-Term(TMT6plex); K11(TMT6plex) 6 P10126 Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3 D3YZ68; P10126; Q3UZQ3; Q3UA81; Q3TII3; D3Z3I8 Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1; Elongation factor 1-alpha 1 OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=3; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha OS=Mus musculus OX=10090 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 1 (Fragment) OS=Mus musculus OX=10090 GN=Eef1a1 PE=1 SV=1 0 2 2 0.7104 0 1 1 1 870.94879 1740.89031 1740.88786 1.41 0.00122 0/0 0 0 6554082.5 HCD 30 MS2 0 439 110 78.2565 24250 24250 24249 QEplus033719.raw F4 452.3 325.6 510.3 391.2 466.4 488.4 249 4.04 1 FALSE 1.14E-05 7.42E-10 1.832 -250 123032 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLEEWNQR [K].dLEEWNQR.[Q] N-Term(TMT6plex) 6 Q3TWZ9 Clathrin light chain OS=Mus musculus OX=10090 GN=Cltb PE=2 SV=1 Q6IRU5-3; Q3TWZ9; Q3TJ95; Q6IRU5; A2VCP8; F7BHJ0 Isoform 3 of Clathrin light chain B OS=Mus musculus OX=10090 GN=Cltb; Clathrin light chain OS=Mus musculus OX=10090 GN=Cltb PE=2 SV=1; Clathrin light chain OS=Mus musculus OX=10090 GN=Cltb PE=2 SV=1; Clathrin light chain B OS=Mus musculus OX=10090 GN=Cltb PE=1 SV=1; Clathrin light chain (Fragment) OS=Mus musculus OX=10090 GN=Cltb PE=2 SV=1; Clathrin light chain (Fragment) OS=Mus musculus OX=10090 GN=Cltb PE=1 SV=1 0 2 2 0.6183 0 1 1 1 659.83209 1318.65691 1318.65889 -1.51 -0.00099 0/0 0 0 11468533 HCD 30 MS2 31.18628 984.8 110 78.259 24251 24251 24249 QEplus033719.raw F4 1010.1 809.3 1014.2 926.4 1066.7 1082 112 2.62 1 FALSE 0.0001187 0.003124 0.554 -250 123036 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVSQAVEHINK [K].gVSQAVEHINk.[T] N-Term(TMT6plex); K11(TMT6plex) 3 Q5FW97 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1 Q8CF78; Q5FW97; B1ARR7 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; Alpha-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 0 3 3 0.7427 0 1 1 1 547.32318 1639.95499 1639.95318 1.11 0.0006 0/0 0 0 428803360 HCD 30 MS2 5.28635 559.5 4.526 78.2613 24252 24252 24249 QEplus033719.raw F4 619.1 560.8 619.8 436 665.6 455.7 392 4.78 1 FALSE 1.14E-05 7.12E-12 2.215 -250 123041 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYIPPKGETK [K].tYIPPkGETk.[K] N-Term(TMT6plex); K6(TMT6plex); K10(TMT6plex) 12 Q8BNM0 High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 Q8BQ02; Q8BNM0; Q6P202; Q58EV5; Q3UJK0; Q8C7C4; D3YZ18; D3YVC6; Q3UBK2; A0A0J9YUZ4; A0A0J9YUD8; Q497Z6 High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=8; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein B1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 1 3 3 0.5714 0 1 1 1 607.70801 1821.10947 1821.1089 0.31 0.00019 0/0 0 0 56420204 HCD 30 MS2 45.60224 1372.3 34.931 78.2636 24253 24253 24249 QEplus033719.raw F4 1241.7 1458.2 1558.6 996.5 1659.3 1319.5 313 2.24 1 FALSE 1.14E-05 0.0003504 0.752 -250 123050 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVSQAVEHINK [K].gVSQAVEHINk.[T] N-Term(TMT6plex); K11(TMT6plex) 3 Q5FW97 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1 Q8CF78; Q5FW97; B1ARR7 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; Alpha-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 0 4 4 0.6738 0 1 1 1 410.74399 1639.95412 1639.95318 0.58 0.00024 0/0 0 0 29996104 HCD 30 MS2 12.26084 445.1 55.297 78.2658 24254 24254 24249 QEplus033719.raw F4 502.5 420.2 492.4 363.7 507 384.6 391 4.23 1 FALSE 1.14E-05 0.0001747 0.811 -250 123080 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILGEDSSK [K].iLGEDSSk.[N] N-Term(TMT6plex); K8(TMT6plex) 12 F8WIV2 "Serine (or cysteine) peptidase inhibitor, clade B, member 6a OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1" E9Q0P9; Q8BZR2; E9PYY0; E9Q108; E9PZQ9; E9Q3Y1; K7E6F1; E9Q6X2; E9Q4R2; F8WIV2; Q4FJQ6; Q3U3L3 "Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; SERPIN domain-containing protein OS=Mus musculus OX=10090 GN=Serpinb6a PE=2 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=8; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=8; Serine (or cysteine) peptidase inhibitor, clade B, member 6a OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serpinb6a protein OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; SERPIN domain-containing protein OS=Mus musculus OX=10090 GN=Serpinb6a PE=2 SV=1" 0 3 3 0.4364 0 1 1 1 436.25888 1306.76209 1306.76185 0.18 0.00008 0/0 0 0 12941853 HCD 30 MS2 51.30472 716 76.444 78.2753 24258 24258 24249 QEplus033719.raw F4 770.4 519.7 632.4 637.8 1086.8 649.1 427 2.91 1 FALSE 0.0008718 0.01208 0.372 -250 123087 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTDLSEK [K].vTDLSEk.[T] N-Term(TMT6plex); K7(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.163 0 1 1 1 625.37372 1249.74016 1249.74039 -0.18 -0.00011 0/0 0 0 12226375 HCD 30 MS2 7.719409 1253.8 110 78.2779 24259 24259 24249 QEplus033719.raw F4 1416.2 456.7 985.6 2086.7 625 1952.7 372 2.7 2 FALSE 0.0002518 0.005075 0.499 -250 123097 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MIYASSK [K].mIYASSk.[D] N-Term(TMT6plex); K7(TMT6plex) 6 Q9R0P5; Q3UHW9; P18760 Destrin OS=Mus musculus OX=10090 GN=Dstn PE=1 SV=3;ADF-H domain-containing protein OS=Mus musculus OX=10090 GN=Cfl2 PE=1 SV=1;Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3 Q9R0P5; Q3UHW9; Q9CX22; A0A494B9A7; P18760; F8WGL3 "Destrin OS=Mus musculus OX=10090 GN=Dstn PE=1 SV=3; ADF-H domain-containing protein OS=Mus musculus OX=10090 GN=Cfl2 PE=1 SV=1; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=2 SV=1; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1; Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1" 0 2 2 0.4373 0 1 1 1 629.36774 1257.7282 1257.72772 0.38 0.00024 0/0 0 0 335553568 HCD 30 MS2 6.400162 981.4 6.122 78.2852 24261 24261 24260 QEplus033719.raw F4 808.7 970 1131 684.8 1351.6 942.3 397 2.63 3 FALSE 0.001108 0.01447 0.339 -250 123105 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VFEVSASR [K].vFEVSASR.[L] N-Term(TMT6plex) 4 Q8BMJ2 "Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2" Q6ZPT2; Q8BMJ2; Q9CQM4; A0A494BA30 "Leucyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1; Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2; Leucyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1; Leucyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Lars PE=1 SV=1" 0 2 2 0.4404 0 1 1 1 562.31897 1123.63066 1123.63089 -0.2 -0.00011 0/0 0 0 38105836 HCD 30 MS2 32.71208 966.7 31.111 78.2899 24263 24263 24260 QEplus033719.raw F4 967.5 703.9 1054.5 996.6 862.9 1215 142 2.18 1 FALSE 0.0002814 0.005576 0.488 -250 123114 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DNMFSGSK [R].dNMFSGSk.[I] N-Term(TMT6plex); K8(TMT6plex) 4 P06745 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4 B2RXT5; P06745; A0A0U1RQ72; B7ZWL9 Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi PE=1 SV=4; Glucose-6-phosphate isomerase 1 OS=Mus musculus OX=10090 GN=Gpi1 PE=1 SV=1; Glucose-6-phosphate isomerase OS=Mus musculus OX=10090 GN=Gpi1 PE=2 SV=1 0 2 2 0.4492 0 1 1 1 672.35504 1343.70281 1343.70296 -0.11 -0.00008 0/0 0 0 32743308 HCD 30 MS2 25.68115 1165.5 60.168 78.2922 24264 24264 24260 QEplus033719.raw F4 1284.5 905.1 1236 1173.8 1027.5 1366 197 2.56 1 FALSE 3.35E-05 0.00127 0.641 -250 123121 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLPFQR [R].kLPFQR.[L] N-Term(TMT6plex); K1(TMT6plex) 9 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; E0CZ27; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=H3f3a PE=3 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 1 3 3 0.107 0 1 1 1 416.2728 1246.80384 1246.8036 0.19 0.00008 0/0 0 0 25172420 HCD 30 MS2 17.6262 690.7 54.835 78.2944 24265 24265 24260 QEplus033719.raw F4 616.4 708.7 746.4 439.5 1046.8 586.5 220 1.87 2 FALSE 0.00459 0.08147 0.058 -250 123131 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NKDEMLTK [K].nkDEMLTk.[E] N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex) 1 Q05186 Reticulocalbin-1 OS=Mus musculus OX=10090 GN=Rcn1 PE=1 SV=1 Q05186 Reticulocalbin-1 OS=Mus musculus OX=10090 GN=Rcn1 PE=1 SV=1 1 3 3 0.6094 0 1 1 1 555.99854 1665.98105 1665.98125 -0.12 -0.00007 0/0 0 0 23816682 HCD 30 MS2 31.93139 1604.8 80.629 78.2967 24266 24266 24260 QEplus033719.raw F4 1744.4 1206.1 1619.9 1274.3 1969.5 1814.7 403 3.2 1 FALSE 1.14E-05 0.0002481 0.781 -250 123137 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEPGATGVQGPPGPAGEEGK [K].gEPGATGVQGPPGPAGEEGk.[R] N-Term(TMT6plex); K20(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 3 3 0.8048 0 1 1 1 750.73083 2250.17795 2250.17665 0.58 0.00044 0/0 0 0 16649760 HCD 30 MS2 0 400 110 78.2992 24267 24267 24260 QEplus033719.raw F4 386.5 381.7 480.5 219.3 486.3 445.7 391 7.43 1 FALSE 1.14E-05 6.31E-16 3.545 -250 123146 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDAQFGGVDQR [K].vDAQFGGVDQR.[K] N-Term(TMT6plex) 2 Q91WQ3 "Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3" Q91WQ3; A2A7S7 "Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3; Tyrosine--tRNA ligase OS=Mus musculus OX=10090 GN=Yars PE=1 SV=1" 0 2 2 0.7566 0 1 1 1 710.87274 1420.73821 1420.73821 0 0 0/0 0 0 17296242 HCD 30 MS2 13.56332 860.1 110 78.3017 24268 24268 24260 QEplus033719.raw F4 917.1 612.6 910.5 868.1 756 1096.3 236 3.41 1 FALSE 1.14E-05 1.02E-08 1.615 -250 123154 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPPGQVTEAVK [K].sPPGQVTEAVk.[V] N-Term(TMT6plex); K11(TMT6plex) 5 Q3UDY1 Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1 Q3TCL2; D3YVJ7; Q3ULP0; Q3UDY1; Q5U415 "Aldo_ket_red domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1; Aldo-keto reductase family 1, member B3 (aldose reductase) (Fragment) OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1; Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1; Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1; Aldo-keto reductase family 1, member B3 (Aldose reductase) OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1" 0 2 2 0.6508 0 1 1 1 785.9646 1570.92192 1570.92048 0.92 0.00072 0/0 0 0 14320411 HCD 30 MS2 12.77587 428.1 110 78.3138 24272 24272 24271 QEplus033719.raw F4 453.8 281.8 477.6 498 297.4 559.9 334 3.58 1 FALSE 1.14E-05 3.23E-07 1.331 -250 123163 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVGIVGK [K].kVGIVGk.[Y] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 5 Q5M9N6 Rpl37a protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1 Q5M9N6; Q4VAF2; Q9CYW3; Q3U8M3; Q3TLC1 Rpl37a protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1; Ribosomal protein L37a OS=Mus musculus OX=10090 GN=Rpl37a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1 1 2 2 0.3838 0 1 1 1 694.48352 1387.95976 1387.96038 -0.45 -0.00031 0/0 0 0 8296245 HCD 30 MS2 28.45477 934.9 110 78.3164 24273 24273 24271 QEplus033719.raw F4 1052.3 683.5 973.1 920.5 884.3 1095.9 70 1.98 1 FALSE 0.004373 0.07922 0.064 -250 123189 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IFTNLHR [R].iFTNLHR.[Q] N-Term(TMT6plex) 2 Q8JZZ5 Phosphatidylinositol transfer protein beta isoform OS=Mus musculus OX=10090 GN=Pitpnb PE=1 SV=1 Q8JZZ5; P53811 Phosphatidylinositol transfer protein beta isoform OS=Mus musculus OX=10090 GN=Pitpnb PE=1 SV=1; Phosphatidylinositol transfer protein beta isoform OS=Mus musculus OX=10090 GN=Pitpnb PE=1 SV=2 0 3 3 0.5338 0 1 1 1 377.2276 1129.66825 1129.66794 0.27 0.0001 0/0 0 0 7038396.5 HCD 30 MS2 16.06394 325.9 110 78.3259 24277 24277 24271 QEplus033719.raw F4 320 244.4 342.8 274.7 388.8 385 361 2.96 1 FALSE 5.44E-05 0.00201 0.598 -250 123203 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTPTTPESSSTGTEDK [R].lTPTTPESSSTGTEDk.[S] N-Term(TMT6plex); K16(TMT6plex) 3 Q64337-2 Isoform 2 of Sequestosome-1 OS=Mus musculus OX=10090 GN=Sqstm1 D3YZJ1; Q64337; Q64337-2 Sequestosome-1 OS=Mus musculus OX=10090 GN=Sqstm1 PE=1 SV=1; Sequestosome-1 OS=Mus musculus OX=10090 GN=Sqstm1 PE=1 SV=1; Isoform 2 of Sequestosome-1 OS=Mus musculus OX=10090 GN=Sqstm1 0 3 3 0.6789 0 1 1 1 703.70367 2109.09647 2109.09633 0.07 0.00005 0/0 0 0 4981638.5 HCD 30 MS2 0 443.1 110 78.3309 24279 24279 24271 QEplus033719.raw F4 424 337.8 504.5 411.3 426.3 554.6 322 5.17 1 FALSE 1.14E-05 4.05E-06 1.122 -250 123213 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCSGVEFSTSGSSNTDTGK [K].scSGVEFSTSGSSNTDTGk.[V] N-Term(TMT6plex); C2(Carbamidomethyl); K19(TMT6plex) 5 G3UX26 Outer mitochondrial membrane protein porin 2 OS=Mus musculus OX=10090 GN=Vdac2 PE=1 SV=1 A0A286YCR8; D3YZT5; G3UX26; D3YUN8; Q60930 Outer mitochondrial membrane protein porin 2 (Fragment) OS=Mus musculus OX=10090 GN=Vdac2 PE=1 SV=1; Outer mitochondrial membrane protein porin 2 (Fragment) OS=Mus musculus OX=10090 GN=Vdac2 PE=1 SV=1; Outer mitochondrial membrane protein porin 2 OS=Mus musculus OX=10090 GN=Vdac2 PE=1 SV=1; Outer mitochondrial membrane protein porin 2 (Fragment) OS=Mus musculus OX=10090 GN=Vdac2 PE=1 SV=1; Voltage-dependent anion-selective channel protein 2 OS=Mus musculus OX=10090 GN=Vdac2 PE=1 SV=2 0 2 2 0.8447 0 1 1 1 1183.56482 2366.12236 2366.1182 1.76 0.00208 0/0 0 0 4790673.5 HCD 30 MS2 0 214.9 110 78.3334 24280 24280 24271 QEplus033719.raw F4 196.2 167.5 282 209.4 156.8 277.8 98 5.86 1 FALSE 1.14E-05 6.31E-16 3.737 -250 123218 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYDECVLEGR [K].sYDEcVLEGR.[A] N-Term(TMT6plex); C5(Carbamidomethyl) 8 B9EKB8 Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1 Q8C6V9; Q7TMR1; Q8K0J1; Q8C2F9; B9EKB8; Q80VF2; B7ZWC4; Q07113 Fibronectin type-II domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Igf2r protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Igf2r protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Fibronectin type-II domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Igf2r protein (Fragment) OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Insulin-like growth factor 2 receptor OS=Mus musculus OX=10090 GN=Igf2r PE=2 SV=1; Cation-independent mannose-6-phosphate receptor OS=Mus musculus OX=10090 GN=Igf2r PE=1 SV=1 0 2 2 0.5038 0 1 1 1 728.8501 1456.69292 1456.69396 -0.71 -0.00052 0/0 0 0 4746713 HCD 30 MS2 0 285.4 110 78.336 24281 24281 24271 QEplus033719.raw F4 295.1 255.1 304.8 256.6 298.9 301.7 81 3.93 1 FALSE 1.14E-05 6.08E-06 1.088 -250 123224 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYPTIK [R].gYPTIk.[FL] N-Term(TMT6plex); K6(TMT6plex) 15 P09103; Q8BXZ1 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2;Protein disulfide-isomerase TMX3 OS=Mus musculus OX=10090 GN=Tmx3 PE=1 SV=2 P09103; Q8BXZ1; Q3URP6; Q3TWE3; A0A494BB11; Q3U738; Q3TT76; Q3TIM0; Q3TF72; Q3UBY9; Q3UDR2; Q3TGS0; Q3THC3; Q3UA23; Q3UJA8 Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=1 SV=2; Protein disulfide-isomerase TMX3 OS=Mus musculus OX=10090 GN=Tmx3 PE=1 SV=2; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase TMX3 OS=Mus musculus OX=10090 GN=Tmx3 PE=1 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase (Fragment) OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1; Protein disulfide-isomerase OS=Mus musculus OX=10090 GN=P4hb PE=2 SV=1 0 2 2 0.1429 0 1 1 1 568.85779 1136.7083 1136.70797 0.29 0.00017 0/0 0 0 181283136 HCD 30 MS2 20.3207 898.4 7.336 78.3433 24283 24283 24282 QEplus033719.raw F4 741.2 818.3 1068 753.3 1101.5 908.1 140 2.24 2 FALSE 0.007822 0.1285 -0.057 -250 123225 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GYPTLK [R].gYPTLk.[FL] N-Term(TMT6plex); K6(TMT6plex) 5 E9PXX7 Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=1 E9PXX7; Q3UBW8; Q91W90; A0A0R4J1Y7; Q3UWX1 Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Txndc5 PE=2 SV=1; Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=2; Thioredoxin domain-containing protein 5 OS=Mus musculus OX=10090 GN=Txndc5 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Txndc5 PE=2 SV=1 0 2 2 0.1429 0 1 2 2 568.85779 1136.7083 1136.70797 0.29 0.00017 0/0 0 0 181283136 HCD 30 MS2 20.3207 898.4 7.336 78.3433 24283 24283 24282 QEplus033719.raw F4 741.2 818.3 1068 753.3 1101.5 908.1 140 2.24 1 FALSE 0.007822 0.1285 -0.057 -250 123233 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLTGIK [K].kLTGIk.[H] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 3 P18760 Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3 Q9CX22; P18760; F8WGL3 "Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=2 SV=1; Cofilin-1 OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=3; Cofilin, non-muscle isoform OS=Mus musculus OX=10090 GN=Cfl1 PE=1 SV=1" 1 3 3 0.1469 0 1 1 1 449.64981 1346.93488 1346.93383 0.78 0.00035 0/0 0 0 101956024 HCD 30 MS2 32.97599 713.7 8.579 78.3455 24284 24284 24282 QEplus033719.raw F4 699.3 520.4 707.3 600.5 1103.5 651.2 79 1.77 1 FALSE 0.002334 0.04649 0.153 -250 123266 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLQSDLQQK [K].qLQSDLQQk.[R] N-Term(TMT6plex); K9(TMT6plex) 9 Q9JKF1; Q9D408 Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2;Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1 Q9JKF1; Q05CQ4; Q3TR56; Q8CGH5; Q9D408; Q8CDW9; Q80UW7; Q3TPD2; Q6ZQK2 Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2; Iqgap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Iqgap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; IQ motif containing GTPase activating protein 1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; Calponin-homology (CH) domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1; MKIAA0051 protein (Fragment) OS=Mus musculus OX=10090 GN=Iqgap1 PE=2 SV=1 0 2 2 0.2707 0 1 1 1 773.45398 1545.90068 1545.90008 0.39 0.0003 0/0 0 0 12096008 HCD 30 MS2 0 609.1 110 78.3548 24288 24288 24282 QEplus033719.raw F4 650.1 633.3 650.2 426.1 708.9 585.7 508 4.1 2 FALSE 1.14E-05 9.04E-07 1.246 -250 123274 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KIEEIK [RK].kIEEIk.[RKADQ] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 1 Q9JJI8 60S ribosomal protein L38 OS=Mus musculus OX=10090 GN=Rpl38 PE=1 SV=3 Q9JJI8 60S ribosomal protein L38 OS=Mus musculus OX=10090 GN=Rpl38 PE=1 SV=3 1 2 2 0.0239 0 1 1 4 723.97858 1446.94988 1446.94988 0 0 0/0 0 0 11666412 HCD 30 MS2 8.869785 714.9 110 78.3573 24289 24289 24282 QEplus033719.raw F4 770.4 617.8 727.4 593.9 820.2 759.6 311 2.51 1 FALSE 0.00574 0.09628 0.017 -250 123275 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KIEELK [RK].kIEELk.[RKADQ] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 10 B2RX47 RIKEN cDNA 4930433I11 gene OS=Mus musculus OX=10090 GN=4930433I11Rik PE=2 SV=1 Q8R1G9; B2RX47; A0A0U1RPT6; Q8R097; Q3TR55; Q8R0L2; E9PV38; Q3TIF7; Q9CWR2; Q8CDS3 2210023G05Rik protein (Fragment) OS=Mus musculus OX=10090 GN=Ces2g PE=2 SV=1; RIKEN cDNA 4930433I11 gene OS=Mus musculus OX=10090 GN=4930433I11Rik PE=2 SV=1; RIKEN cDNA 4930433I11 gene OS=Mus musculus OX=10090 GN=4930433I11Rik PE=4 SV=1; Carboxylic ester hydrolase OS=Mus musculus OX=10090 GN=Ces2g PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Smyd3 PE=2 SV=1; 2210023G05Rik protein (Fragment) OS=Mus musculus OX=10090 GN=Ces2g PE=2 SV=1; Carboxylic ester hydrolase OS=Mus musculus OX=10090 GN=Ces2g PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Smyd3 PE=2 SV=1; Histone-lysine N-methyltransferase SMYD3 OS=Mus musculus OX=10090 GN=Smyd3 PE=2 SV=1; DUF4629 domain-containing protein OS=Mus musculus OX=10090 GN=4930433I11Rik PE=2 SV=1 1 2 2 0.0239 0 1 2 5 723.97858 1446.94988 1446.94988 0 0 0/0 0 0 11666412 HCD 30 MS2 8.869785 714.9 110 78.3573 24289 24289 24282 QEplus033719.raw F4 770.4 617.8 727.4 593.9 820.2 759.6 311 2.51 3 FALSE 0.00574 0.09628 0.017 -250 123276 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEEIK [RK].kLEEIk.[RKADQ] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 2 A0A5F8MQ94; P0DP99 RIKEN cDNA 1810058I24 gene OS=Mus musculus OX=10090 GN=1810058I24Rik PE=4 SV=1; Short transmembrane mitochondrial protein 1 OS=Mus musculus OX=10090 GN=Stmp1 PE=1 SV=2 1 2 2 0.0239 0 1 3 6 723.97858 1446.94988 1446.94988 0 0 0/0 0 0 11666412 HCD 30 MS2 8.869785 714.9 110 78.3573 24289 24289 24282 QEplus033719.raw F4 770.4 617.8 727.4 593.9 820.2 759.6 311 2.51 1 FALSE 0.00574 0.09628 0.017 -250 123277 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEELK [RK].kLEELk.[RKADQ] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 5 Q8K003 Translation machinery-associated protein 7 OS=Mus musculus OX=10090 GN=Tma7 PE=3 SV=1 Q8VCD3; Q8K003; Q8VCD3-2; A0A2I3BPZ6; Q8C163 "Protein ERGIC-53-like OS=Mus musculus OX=10090 GN=Lman1l PE=2 SV=2; Translation machinery-associated protein 7 OS=Mus musculus OX=10090 GN=Tma7 PE=3 SV=1; Isoform 2 of Protein ERGIC-53-like OS=Mus musculus OX=10090 GN=Lman1l; Guanine nucleotide-binding protein-like 3 (Fragment) OS=Mus musculus OX=10090 GN=Gnl3 PE=1 SV=1; Nuclease EXOG, mitochondrial OS=Mus musculus OX=10090 GN=Exog PE=1 SV=1" 1 2 2 0.0239 0 1 4 7 723.97858 1446.94988 1446.94988 0 0 0/0 0 0 11666412 HCD 30 MS2 8.869785 714.9 110 78.3573 24289 24289 24282 QEplus033719.raw F4 770.4 617.8 727.4 593.9 820.2 759.6 311 2.51 3 FALSE 0.00574 0.09628 0.017 -250 123291 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LCDPSVK [R].lcDPSVk.[S] N-Term(TMT6plex); C2(Carbamidomethyl); K7(TMT6plex) 1 Q922Q1 Mitochondrial amidoxime reducing component 2 OS=Mus musculus OX=10090 GN=Mtarc2 PE=1 SV=1 Q922Q1 Mitochondrial amidoxime reducing component 2 OS=Mus musculus OX=10090 GN=Mtarc2 PE=1 SV=1 0 2 2 0.3566 0 1 1 1 638.87085 1276.73442 1276.73353 0.7 0.00045 0/0 0 0 9162923 HCD 30 MS2 24.3594 1155.9 110 78.3624 24291 24291 24282 QEplus033719.raw F4 1202.3 1005.7 1231.5 1019.3 1216.1 1260.4 501 2.44 1 FALSE 0.0023 0.04554 0.156 -250 123308 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEAALK [K].vEAALk.[N] N-Term(TMT6plex); K6(TMT6plex) 5 Q9QUJ7; Q9CZW4 Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus OX=10090 GN=Acsl4 PE=1 SV=2;Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=2 E9PUC2; Q9QUJ7; Q9QUJ7-2; Q8BW44; Q9CZW4 Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=1; Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus OX=10090 GN=Acsl4 PE=1 SV=2; Isoform Short of Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus OX=10090 GN=Acsl4; AMP-binding domain-containing protein OS=Mus musculus OX=10090 GN=Acsl4 PE=2 SV=1; Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=2 0 2 2 0.0185 2 2 3 544.85852 1088.70976 1088.70797 1.65 0.0009 0/0 0 0 123851832 HCD 30 MS2 30.21602 994.3 10.663 78.3721 24294 24294 24293 QEplus033719.raw F4 989.1 780.1 1081.8 970.1 959 1185.8 161 2.12 2 FALSE 0.006363 0.103 -0.002 -250 123323 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LVEEIR [R].lVEEIR.[Q] N-Term(TMT6plex) 2 Q8K009 Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=2 D3Z6B9; Q8K009 Formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=1; Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Mus musculus OX=10090 GN=Aldh1l2 PE=1 SV=2 0 2 2 0.034 0 1 1 2 494.30569 987.60411 987.60361 0.51 0.00025 0/0 0 0 30794574 HCD 30 MS2 34.83977 823.1 36.06 78.3792 24297 24297 24293 QEplus033719.raw F4 791.5 731.3 935.4 675.6 878.9 925.9 174 2.06 1 FALSE 0.002552 0.05023 0.141 -250 123341 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAEVLNK [K].aAEVLNk.[H] N-Term(TMT6plex); K7(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; A0A3Q4EH91; Q9D0E1-2; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 3 3 0.0943 0 1 1 1 401.58932 1202.75342 1202.75089 2.1 0.00084 0/0 0 0 5974282.5 HCD 30 MS2 45.19493 779.8 110 78.3841 24299 24299 24293 QEplus033719.raw F4 825.6 601 755.8 520.1 943.6 1032.5 485 2.44 1 FALSE 0.002509 0.04943 0.144 -250 123356 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEPGATGVQGPPGPAGEEGK [K].gEPGATGVQGPPGPAGEEGk.[R] N-Term(TMT6plex); K20(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 2 2 0.8185 0 1 1 1 1125.59265 2250.17803 2250.17665 0.61 0.00069 0/0 0 0 2387657.5 HCD 30 MS2 0 108 110 78.3892 24301 24301 24293 QEplus033719.raw F4 92.9 100.1 143.5 52.8 136.7 122 391 6.28 1 FALSE 1.14E-05 6.31E-16 3.37 -250 123368 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QGIETPEDQNDLRK [K].qGIETPEDQNDLRk.[M] N-Term(TMT6plex); K14(TMT6plex) 9 Q3TZI3 Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=2 SV=1 Q3TZI3; Q3UK67; E9Q4Q2; D3YZC9; D3YVH4; Q64213; Q64213-2; D3YZD0; Q3UI45 Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=2 SV=1; Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=2 SV=1; Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=1 SV=1; Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=1 SV=1; Splicing factor 1 (Fragment) OS=Mus musculus OX=10090 GN=Sf1 PE=1 SV=1; Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=1 SV=6; Isoform CW17E of Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1; Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=1 SV=1; Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=2 SV=1 1 3 3 0.6609 0 1 1 1 701.04803 2101.12955 2101.12897 0.28 0.00019 0/0 0 0 21369888 HCD 30 MS2 13.98443 682.7 110 78.3942 24303 24303 24293 QEplus033719.raw F4 657 629.7 744.4 552.7 773.1 739.3 349 4.07 1 FALSE 1.14E-05 3.66E-09 1.7 -250 123375 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGEFSGANK [K].vGEFSGANk.[E] N-Term(TMT6plex); K9(TMT6plex) 1 P10639 Thioredoxin OS=Mus musculus OX=10090 GN=Txn PE=1 SV=3 P10639 Thioredoxin OS=Mus musculus OX=10090 GN=Txn PE=1 SV=3 0 2 2 0.6035 0 1 1 1 683.89063 1366.77397 1366.77309 0.65 0.00044 0/0 0 0 152064176 HCD 30 MS2 21.96105 983.4 14.015 78.4015 24305 24305 24304 QEplus033719.raw F4 951.3 910.5 1118.3 790.7 1108.8 1020.7 410 3.43 1 FALSE 1.14E-05 4.48E-06 1.114 -250 123381 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AAEVLNK [K].aAEVLNk.[H] N-Term(TMT6plex); K7(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; A0A3Q4EH91; Q9D0E1-2; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 0 2 2 0.4216 0 1 1 1 601.87921 1202.75115 1202.75089 0.21 0.00013 0/0 0 0 70275712 HCD 30 MS2 15.7026 1325.1 33.528 78.4038 24306 24306 24304 QEplus033719.raw F4 1344.1 1268.7 1440.4 1032.5 1537.3 1327.8 539 2.87 1 FALSE 0.0002814 0.00572 0.485 -250 123392 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHTDFEK [K].iHTDFEk.[G] N-Term(TMT6plex); K7(TMT6plex) 3 Q3TJF2 Obg-like ATPase 1 OS=Mus musculus OX=10090 GN=Ola1 PE=2 SV=1 Q3TJF2; Q3TW21; Q9CZ30 Obg-like ATPase 1 OS=Mus musculus OX=10090 GN=Ola1 PE=2 SV=1; Obg-like ATPase 1 OS=Mus musculus OX=10090 GN=Ola1 PE=2 SV=1; Obg-like ATPase 1 OS=Mus musculus OX=10090 GN=Ola1 PE=1 SV=1 0 3 3 0.6465 0 1 1 1 449.9278 1347.76883 1347.76727 1.16 0.00052 0/0 0 0 49425768 HCD 30 MS2 55.00663 975.7 22.518 78.4083 24308 24308 24304 QEplus033719.raw F4 962.3 728.6 987.4 804.8 1432.1 939.3 474 2.97 1 FALSE 0.002123 0.03967 0.176 -250 123422 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSILQK [K].gSILQk.[H] N-Term(TMT6plex); K6(TMT6plex) 6 A4FUS0 Eif2b3 protein OS=Mus musculus OX=10090 GN=Eif2b3 PE=2 SV=1 A4FUS0; B1AUN2; Q3UKV0; B1AUN3; A0AUM9; Q3T9T4 "Eif2b3 protein OS=Mus musculus OX=10090 GN=Eif2b3 PE=2 SV=1; Eukaryotic translation initiation factor 2B, subunit 3 OS=Mus musculus OX=10090 GN=Eif2b3 PE=1 SV=1; Eukaryotic translation initiation factor 2B, subunit 3 OS=Mus musculus OX=10090 GN=Eif2b3 PE=1 SV=1; Eukaryotic translation initiation factor 2B, subunit 3 OS=Mus musculus OX=10090 GN=Eif2b3 PE=1 SV=1; Eif2b3 protein OS=Mus musculus OX=10090 GN=Eif2b3 PE=2 SV=2; NTP_transferase domain-containing protein OS=Mus musculus OX=10090 GN=Eif2b3 PE=2 SV=1" 0 2 2 0.2079 0 1 1 1 552.36279 1103.71831 1103.71887 -0.5 -0.00028 0/0 0 0 13300542 HCD 30 MS2 33.15656 1202.4 110 78.4176 24312 24312 24304 QEplus033719.raw F4 1187.2 998.6 1354.1 1049.9 1231.4 1393.2 104 2.02 1 FALSE 0.003802 0.07185 0.083 -250 123443 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPPGQVTEAVK [K].sPPGQVTEAVk.[V] N-Term(TMT6plex); K11(TMT6plex) 5 Q3UDY1 Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1 Q3TCL2; D3YVJ7; Q3ULP0; Q3UDY1; Q5U415 "Aldo_ket_red domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1; Aldo-keto reductase family 1, member B3 (aldose reductase) (Fragment) OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1; Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1; Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1; Aldo-keto reductase family 1, member B3 (Aldose reductase) OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1" 0 3 3 0.6849 0 1 1 1 524.31244 1570.92276 1570.92048 1.45 0.00076 0/0 0 0 33385360 HCD 30 MS2 52.54144 851 24.455 78.43 24316 24316 24315 QEplus033719.raw F4 773.4 649.8 884.7 757.6 1062.1 978.3 327 3.65 1 FALSE 1.14E-05 4.07E-06 1.122 -250 123459 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVEELTR [K].vVEELTR.[I] N-Term(TMT6plex) 3 Q3U1J4 DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=2 A0A494B987; Q3ULS8; Q3U1J4 DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=1; DNA damage-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ddb1 PE=2 SV=1; DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=2 0 2 2 0.1325 0 1 1 1 537.82214 1074.63701 1074.63564 1.27 0.00069 0/0 0 0 41146628 HCD 30 MS2 48.70075 801.1 24.087 78.4393 24320 24320 24315 QEplus033719.raw F4 821.3 678.1 898.5 663.4 870.6 874.8 237 2.49 1 FALSE 0.0003996 0.007061 0.457 -250 123477 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQDVLLSHQDTK [K].eQDVLLSHQDTk.[Q] N-Term(TMT6plex); K12(TMT6plex) 33 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 0 3 3 0.6237 0 1 1 1 624.34747 1871.02787 1871.02746 0.22 0.00013 0/0 0 0 18271830 HCD 30 MS2 5.689355 1093.9 110 78.4441 24322 24322 24315 QEplus033719.raw F4 1114.5 788.8 1159.7 1081.1 1011.9 1407.4 406 4.97 1 FALSE 1.14E-05 6.27E-13 2.415 -250 123492 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VADNSFDAK [R].vADNSFDAk.[R] N-Term(TMT6plex); K9(TMT6plex) 5 A0A286YDA2 Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1 A0A286YDA2; A0A286YDT3; A0A286YDV7; E9Q5C9; E9Q5C9-2 Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 (Fragment) OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1; Isoform 2 of Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 0 2 2 0.5755 0 1 1 1 712.89319 1424.7791 1424.77857 0.38 0.00027 0/0 0 0 14434258 HCD 30 MS2 16.3748 963.6 110 78.4489 24324 24324 24315 QEplus033719.raw F4 994.4 847 1028.7 673.3 1237.2 1001 362 3.84 1 FALSE 1.14E-05 1.13E-06 1.227 -250 123540 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADTDDAPVPAPAGDQK [R].aDTDDAPVPAPAGDQk.[D] N-Term(TMT6plex); K16(TMT6plex) 3 Q02819 Nucleobindin-1 OS=Mus musculus OX=10090 GN=Nucb1 PE=1 SV=2 A0A1C7CYU3; Q02819; Q8BRD3 Nucleobindin-1 OS=Mus musculus OX=10090 GN=Nucb1 PE=1 SV=1; Nucleobindin-1 OS=Mus musculus OX=10090 GN=Nucb1 PE=1 SV=2; Nucleobindin-1 OS=Mus musculus OX=10090 GN=Nucb1 PE=2 SV=1 0 3 3 0.7745 0 1 1 1 676.0224 2026.05265 2026.04932 1.64 0.00111 0/0 0 0 5622335.5 HCD 30 MS2 0 332.6 110 78.468 24331 24331 24326 QEplus033719.raw F4 347.7 276.8 366.9 283.8 359.8 360.7 339 4.7 1 FALSE 1.14E-05 1.19E-12 2.362 -250 123545 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VGGHAAEYGAEALER [K].vGGHAAEYGAEALER.[M] N-Term(TMT6plex) 1 P01966 SWISS-PROT:P01966 (Bos taurus) Hemoglobin subunit alpha P01966 SWISS-PROT:P01966 (Bos taurus) Hemoglobin subunit alpha 0 3 3 0.2737 0 1 1 1 586.97052 1758.89701 1758.89723 -0.13 -0.00007 0/0 0 0 9657864 HCD 30 MS2 50.07704 922.4 110 78.4705 24332 24332 24326 QEplus033719.raw F4 889.6 673.7 981.2 811.4 1015.1 1163.3 221 3.58 1 TRUE 1.14E-05 8.29E-08 1.443 -250 123552 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTTTVAISK [K].tTTTVAISk.[D] N-Term(TMT6plex); K9(TMT6plex) 1 Q3UYC1 Diphosphomevalonate decarboxylase OS=Mus musculus OX=10090 GN=Mvd PE=1 SV=1 Q3UYC1 Diphosphomevalonate decarboxylase OS=Mus musculus OX=10090 GN=Mvd PE=1 SV=1 0 2 2 0.6972 0 1 1 1 690.42981 1379.85234 1379.851 0.97 0.00067 0/0 0 0 7046383 HCD 30 MS2 0 627.1 110 78.473 24333 24333 24326 QEplus033719.raw F4 643.2 507.4 781 546 505.3 779.4 263 3.6 1 FALSE 1.14E-05 1.50E-06 1.204 -250 123560 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPQYGTLEK [K].gPQYGTLEk.[A] N-Term(TMT6plex); K9(TMT6plex) 6 Q543N7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pacsin3 PE=1 SV=1 A6PWR1; B1AW93; B1AW94; B1AW91; Q543N7; B1AW92 Protein kinase C and casein kinase II substrate protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Pacsin3 PE=1 SV=1; Protein kinase C and casein kinase II substrate protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Pacsin3 PE=1 SV=1; Protein kinase C and casein kinase II substrate protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Pacsin3 PE=1 SV=1; Protein kinase C and casein kinase II substrate protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Pacsin3 PE=1 SV=8; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pacsin3 PE=1 SV=1; Protein kinase C and casein kinase II substrate protein 3 (Fragment) OS=Mus musculus OX=10090 GN=Pacsin3 PE=1 SV=1 0 2 2 0.405 0 1 1 1 725.91925 1450.83122 1450.8306 0.43 0.00031 0/0 0 0 6532257.5 HCD 30 MS2 33.16924 646.3 110 78.4755 24334 24334 24326 QEplus033719.raw F4 674 416.8 678.4 755.4 563.8 789.3 474 3.21 1 FALSE 1.14E-05 2.28E-06 1.169 -250 123567 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMGGPYGGGNYGPGGSGGSGGYGGR [R].nMGGPYGGGNYGPGGSGGSGGYGGR.[S] N-Term(TMT6plex) 4 O88569 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2 O88569-3; B7ZP22; O88569; O88569-2 Isoform 3 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2; Isoform 2 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 0 3 3 0.8785 0 1 1 1 807.0307 2419.07755 2419.06828 3.83 0.00309 0/0 0 0 4489337 HCD 30 MS2 0 150.1 110 78.478 24335 24335 24326 QEplus033719.raw F4 146.1 151.2 169.2 118.6 185.9 129.8 26 8.89 1 FALSE 1.14E-05 6.31E-16 4.053 -250 123572 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTSFEAAATSGGSASSEK [R].gTSFEAAATSGGSASSEk.[A] N-Term(TMT6plex); K18(TMT6plex) 1 Q99LC5 "Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Etfa PE=1 SV=2" Q99LC5 "Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Etfa PE=1 SV=2" 0 3 3 0.7751 0 1 1 1 701.6922 2103.06205 2103.06061 0.68 0.00048 0/0 0 0 28818790 HCD 30 MS2 10.55237 563 110 78.4806 24336 24336 24326 QEplus033719.raw F4 526.6 478.4 625.1 509.1 607.1 632 278 6.67 1 FALSE 1.14E-05 2.59E-15 2.868 -250 123587 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SFQQELDAR [K].sFQQELDAR.[H] N-Term(TMT6plex) 3 Q9QZE7 Translin-associated protein X OS=Mus musculus OX=10090 GN=Tsnax PE=1 SV=1 Q9QZE7; Q3TXK6; A0A1D5RLR0 Translin-associated protein X OS=Mus musculus OX=10090 GN=Tsnax PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tsnax PE=2 SV=1; Translin-associated protein X OS=Mus musculus OX=10090 GN=Tsnax PE=1 SV=1 0 2 2 0.4982 0 1 1 1 661.8504 1322.69353 1322.69019 2.52 0.00167 0/0 0 0 12095825 HCD 30 MS2 34.49158 745.5 110 78.4904 24339 24339 24337 QEplus033719.raw F4 741.2 652 808 594.8 868.7 808.1 267 2.83 1 FALSE 1.14E-05 3.24E-06 1.14 -250 123604 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVTAIQGPGGK [R].nVTAIQGPGGk.[W] N-Term(TMT6plex); K11(TMT6plex) 2 A0A1L1STE6 "Isocitrate dehydrogenase [NAD] subunit, mitochondrial OS=Mus musculus OX=10090 GN=Idh3a PE=1 SV=1" A0A1L1STE6; Q9D6R2 "Isocitrate dehydrogenase [NAD] subunit, mitochondrial OS=Mus musculus OX=10090 GN=Idh3a PE=1 SV=1; Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Idh3a PE=1 SV=1" 0 3 3 0.6225 0 1 1 1 500.63678 1499.89579 1499.8946 0.79 0.0004 0/0 0 0 13183254 HCD 30 MS2 19.53805 882.4 110 78.4951 24341 24341 24337 QEplus033719.raw F4 945.9 639.1 915 848.4 873.9 1072.1 339 4.45 1 FALSE 1.14E-05 1.34E-06 1.213 -250 123611 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVENATSGETLEENGAGD [K].tVENATSGETLEENGAGD.[-] N-Term(TMT6plex) 2 Q3TGU7 Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=1 Q3TGU7; P50580-2 Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=1; Isoform 2 of Proliferation-associated protein 2G4 OS=Mus musculus OX=10090 GN=Pa2g4 0 3 3 0.7856 0 1 1 1 674.98187 2022.93106 2022.9301 0.48 0.00032 0/0 0 0 8623391 HCD 30 MS2 6.152634 398.5 110 78.4977 24342 24342 24337 QEplus033719.raw F4 372.2 329.5 451.6 342.5 461.5 433.9 48 5.97 1 FALSE 1.14E-05 1.53E-10 1.962 -250 123616 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADYEIASK [R].aDYEIASk.[E] N-Term(TMT6plex); K8(TMT6plex) 14 Q3TV90; Q3UZ17 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Luc7l PE=2 SV=1;Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1 E9Q715; Q3TV90; Q05CX5; Q9CYI4; Q7TNC4-2; Q3USM3; Q9CYI4-2; Q3U5L2; Q7TNC4-3; Q3UZ17; Q7TNC4; Q3UGK2; A0A0R4J047; Q05D11 Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Luc7l PE=2 SV=1; Luc7l2 protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=1 SV=1; Putative RNA-binding protein Luc7-like 1 OS=Mus musculus OX=10090 GN=Luc7l PE=1 SV=2; Isoform 2 of Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1; Isoform 2 of Putative RNA-binding protein Luc7-like 1 OS=Mus musculus OX=10090 GN=Luc7l; Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1; Isoform 3 of Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1; Putative RNA-binding protein Luc7-like 2 OS=Mus musculus OX=10090 GN=Luc7l2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Luc7l2 PE=2 SV=1; Putative RNA-binding protein Luc7-like 1 OS=Mus musculus OX=10090 GN=Luc7l PE=1 SV=1; Luc7l protein (Fragment) OS=Mus musculus OX=10090 GN=Luc7l PE=2 SV=1 0 2 2 0.5232 0 1 1 1 677.88446 1354.76164 1354.76185 -0.15 -0.0001 0/0 0 0 9707754 HCD 30 MS2 56.07262 1180.3 110 78.5002 24343 24343 24337 QEplus033719.raw F4 1255.5 917.1 1380.4 1076.8 1031.4 1420.4 298 3.02 2 FALSE 1.14E-05 0.0002089 0.796 -250 123632 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SGINCPIQK [K].sGINcPIQk.[D] N-Term(TMT6plex); C5(Carbamidomethyl); K9(TMT6plex) 4 Q3U3C2 Epididymal secretory protein E1 OS=Mus musculus OX=10090 GN=Npc2 PE=2 SV=1 Q3TXQ4; Q3U3C2; Q9Z0J0; Q3U8F7 Epididymal secretory protein E1 OS=Mus musculus OX=10090 GN=Npc2 PE=2 SV=1; Epididymal secretory protein E1 OS=Mus musculus OX=10090 GN=Npc2 PE=2 SV=1; NPC intracellular cholesterol transporter 2 OS=Mus musculus OX=10090 GN=Npc2 PE=1 SV=1; Epididymal secretory protein E1 OS=Mus musculus OX=10090 GN=Npc2 PE=2 SV=1 0 2 2 0.48 0 1 1 1 737.92529 1474.84331 1474.84521 -1.29 -0.00095 0/0 0 0 8166234 HCD 30 MS2 11.33999 578.4 110 78.5052 24345 24345 24337 QEplus033719.raw F4 521.5 576.5 715 447.9 615.5 593.8 442 3.5 1 FALSE 1.14E-05 5.45E-06 1.098 -250 123636 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTILGHVQR [R].vTILGHVQR.[G] N-Term(TMT6plex) 3 Q8C605 ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkp PE=1 SV=1 Q9WUA3-2; Q8C605; Q9WUA3 "Isoform 2 of ATP-dependent 6-phosphofructokinase, platelet type OS=Mus musculus OX=10090 GN=Pfkp; ATP-dependent 6-phosphofructokinase OS=Mus musculus OX=10090 GN=Pfkp PE=1 SV=1; ATP-dependent 6-phosphofructokinase, platelet type OS=Mus musculus OX=10090 GN=Pfkp PE=1 SV=1" 0 3 3 0.5406 0 1 1 1 417.92761 1251.76828 1251.77347 -4.14 -0.00173 0/0 0 0 6585318.5 HCD 30 MS2 57.16251 586.4 107.146 78.5076 24346 24346 24337 QEplus033719.raw F4 619.5 466.7 620 430.6 714.4 667.4 213 4.31 1 FALSE 1.14E-05 2.35E-05 0.977 -250 123646 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VEAALK [K].vEAALk.[N] N-Term(TMT6plex); K6(TMT6plex) 5 Q9QUJ7; Q9CZW4 Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus OX=10090 GN=Acsl4 PE=1 SV=2;Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=2 E9PUC2; Q9QUJ7; Q9QUJ7-2; Q8BW44; Q9CZW4 Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=1; Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus OX=10090 GN=Acsl4 PE=1 SV=2; Isoform Short of Long-chain-fatty-acid--CoA ligase 4 OS=Mus musculus OX=10090 GN=Acsl4; AMP-binding domain-containing protein OS=Mus musculus OX=10090 GN=Acsl4 PE=2 SV=1; Long-chain-fatty-acid--CoA ligase 3 OS=Mus musculus OX=10090 GN=Acsl3 PE=1 SV=2 0 3 3 0.0918 0 1 1 1 363.57428 1088.70829 1088.70797 0.29 0.00011 0/0 0 0 5211733.5 HCD 30 MS2 25.77407 226.7 110 78.5174 24349 24349 24348 QEplus033719.raw F4 219.2 185.4 238.3 226 227.9 263.4 161 1.96 2 FALSE 0.003708 0.0709 0.085 -250 123662 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGVKFDESEK [K].eGVkFDESEk.[T] N-Term(TMT6plex); K4(TMT6plex); K10(TMT6plex) 6 Q3UBU0 HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1 Q3TUD6; Q3UBU0; Q91V38; Q8CCY5; F7C312; P08113 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Heat shock protein 90, beta (Grp94), member 1 OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Endoplasmin (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=1; Endoplasmin OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=2" 1 3 3 0.5189 0 1 1 1 619.01923 1855.04312 1855.0416 0.82 0.00051 0/0 0 0 59808908 HCD 30 MS2 28.08115 1725.8 34.144 78.5241 24352 24352 24348 QEplus033719.raw F4 1837.3 1563.5 1807.9 1652 1710.6 1783.6 411 2.64 1 FALSE 5.44E-05 0.001991 0.599 -250 123674 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVQLQTHPNVDK [K].gVQLQTHPNVDk.[K] N-Term(TMT6plex); K12(TMT6plex) 4 Q5XJY5 Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=1 SV=2 Q5XJY5; Q8R1S6; Q3U4S9; Q3TDU1 Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=1 SV=2; Coatomer subunit delta (Fragment) OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1; Coatomer subunit delta OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1; Coatomer subunit delta (Fragment) OS=Mus musculus OX=10090 GN=Arcn1 PE=2 SV=1 0 3 3 0.595 0 1 1 1 598.68225 1794.0322 1794.0274 2.67 0.0016 0/0 0 0 20629022 HCD 30 MS2 47.01225 675.9 39.958 78.5287 24354 24354 24348 QEplus033719.raw F4 683.6 590.8 738.5 590.8 747.5 704.2 461 4.37 1 FALSE 1.14E-05 1.80E-08 1.569 -250 123705 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEGTPAAGDGLGRPLGPTPSQSR [R].gEGTPAAGDGLGRPLGPTPSQSR.[F] N-Term(TMT6plex) 2 E9QM38 Solute carrier family 12 member 2 OS=Mus musculus OX=10090 GN=Slc12a2 PE=1 SV=1 E9QM38; P55012 Solute carrier family 12 member 2 OS=Mus musculus OX=10090 GN=Slc12a2 PE=1 SV=1; Solute carrier family 12 member 2 OS=Mus musculus OX=10090 GN=Slc12a2 PE=1 SV=2 0 3 3 0.732 0 1 1 1 803.08893 2407.25223 2407.25271 -0.2 -0.00016 0/0 0 0 2703790.25 HCD 30 MS2 0 136.7 110 78.5387 24358 24358 24348 QEplus033719.raw F4 144.3 86.1 175.6 139.3 85.4 189.6 375 4.44 1 FALSE 1.14E-05 1.29E-14 2.736 -250 123728 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DLIQGK [K].dLIQGk.[D] N-Term(TMT6plex); K6(TMT6plex) 1 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 P27773 Protein disulfide-isomerase A3 OS=Mus musculus OX=10090 GN=Pdia3 PE=1 SV=2 0 2 2 0.2597 0 1 1 1 566.3606 1131.71391 1131.71378 0.12 0.00007 0/0 0 0 167419408 HCD 30 MS2 13.50272 1088.2 9.043 78.5528 24363 24363 24359 QEplus033719.raw F4 1153.7 1019.8 1179.3 807.2 1324.9 1044 370 2.31 1 FALSE 0.005139 0.08825 0.039 -250 123736 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AADIDQEVK [K].aADIDQEVk.[E] N-Term(TMT6plex); K9(TMT6plex) 2 Q6ZQ38 Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2 Q3UMI9; Q6ZQ38 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cand1 PE=2 SV=1; Cullin-associated NEDD8-dissociated protein 1 OS=Mus musculus OX=10090 GN=Cand1 PE=1 SV=2 0 2 2 0.4728 0 1 1 1 723.91431 1446.82134 1446.82043 0.63 0.00045 0/0 0 0 39848160 HCD 30 MS2 53.91534 784 39.231 78.5551 24364 24364 24359 QEplus033719.raw F4 764 697.7 813.2 647.2 944.1 837.8 456 3.68 1 FALSE 1.14E-05 1.37E-06 1.211 -250 123761 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TFGHLLR [R].tFGHLLR.[Y] N-Term(TMT6plex) 8 Q3TWL6 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1 Q3TI61; Q3TWL6; Q3TW71; Q3U9Y8; Q3TIP0; Q8VDM4; Q3TXV1; Q80V77 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=1 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus OX=10090 GN=Psmd2 PE=2 SV=1 0 3 3 0.5219 0 1 1 1 358.22055 1072.6471 1072.64648 0.58 0.00021 0/0 0 0 12571655 HCD 30 MS2 23.7929 411.4 100.481 78.5622 24367 24367 24359 QEplus033719.raw F4 425.4 311.5 451.6 320 452 508.1 315 3.43 1 FALSE 5.44E-05 0.002662 0.57 -250 123771 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVENATSGETLEENGAGD [K].tVENATSGETLEENGAGD.[-] N-Term(TMT6plex) 2 Q3TGU7 Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=1 Q3TGU7; P50580-2 Peptidase_M24 domain-containing protein OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=1; Isoform 2 of Proliferation-associated protein 2G4 OS=Mus musculus OX=10090 GN=Pa2g4 0 2 2 0.8714 0 1 1 1 1011.9696 2022.93193 2022.9301 0.9 0.00091 0/0 0 0 6800646 HCD 30 MS2 0 58.1 110 78.5647 24368 24368 24359 QEplus033719.raw F4 63 51.7 60.6 50.3 62.8 60.3 48 5.6 1 FALSE 1.14E-05 2.83E-11 2.101 -250 123786 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERDIEALK [R].eRDIEALk.[S] N-Term(TMT6plex); K8(TMT6plex) 1 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 1 3 3 0.3397 0 1 1 1 477.95779 1431.85883 1431.85715 1.17 0.00056 0/0 0 0 60514428 HCD 30 MS2 49.66883 1214.5 35.259 78.5768 24372 24372 24370 QEplus033719.raw F4 1236.6 1020.7 1225.4 921.3 1664.6 1218.7 490 3.15 1 FALSE 1.14E-05 3.83E-05 0.937 -250 123800 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GFMDGK [K].gFMDGk.[Q] N-Term(TMT6plex); K6(TMT6plex) 19 Q69ZX3; Q5SV64; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q6URW6-2; Q69ZX3; Q80T68; A0A2R8VHF9; Q8BLI3; Q8BWI3; A0A338P6K2; O08638-2; O08638; Q5SV64; Q3UH59; Q8VDD5; A0A140LI60; Q6URW6; E9QPE7; Q8BLI1; K3W4R2; Q6URW6-3; Q61879 Isoform 2 of Myosin-14 OS=Mus musculus OX=10090 GN=Myh14; MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-14 (Fragment) OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Myosin-14 OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-14 OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Isoform 3 of Myosin-14 OS=Mus musculus OX=10090 GN=Myh14; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 0 2 2 0.4971 0 1 1 1 556.81274 1112.61821 1112.61744 0.7 0.00039 0/0 0 0 62893508 HCD 30 MS2 34.55448 1068.8 18.908 78.5813 24374 24374 24370 QEplus033719.raw F4 1074.4 969.3 1191 797 1346.9 1033.9 127 1.75 3 FALSE 0.008074 0.1351 -0.067 -250 123810 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGTQYLLR [K].tGTQYLLR.[T] N-Term(TMT6plex) 10 F8WIV2 "Serine (or cysteine) peptidase inhibitor, clade B, member 6a OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1" E9Q0P9; Q8BZR2; E9PYY0; E9Q108; E9Q3Y1; K7E6F1; E9Q6X2; F8WIV2; Q4FJQ6; Q3U3L3 "Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; SERPIN domain-containing protein OS=Mus musculus OX=10090 GN=Serpinb6a PE=2 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=8; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a (Fragment) OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serine (or cysteine) peptidase inhibitor, clade B, member 6a OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; Serpinb6a protein OS=Mus musculus OX=10090 GN=Serpinb6a PE=1 SV=1; SERPIN domain-containing protein OS=Mus musculus OX=10090 GN=Serpinb6a PE=2 SV=1" 0 2 2 0.5299 0 1 1 1 590.85175 1180.69621 1180.68874 6.33 0.00374 0/0 0 0 38225908 HCD 30 MS2 34.73872 899.4 25.052 78.5836 24375 24375 24370 QEplus033719.raw F4 909.4 789.6 981 813.5 964.2 938.8 265 2.34 1 FALSE 3.35E-05 0.001323 0.637 -250 123819 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISEENIK [K].iSEENIk.[N] N-Term(TMT6plex); K7(TMT6plex) 6 Q6A0C9 AP-2 complex subunit mu (Fragment) OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1 Q6A0C9; Q5FWI9; Q3TWV4; Q3TH69; A0A338P6T4; Q3UCW9 AP-2 complex subunit mu (Fragment) OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1; AP-2 complex subunit mu OS=Mus musculus OX=10090 GN=Ap2m1 PE=1 SV=1; AP-2 complex subunit mu OS=Mus musculus OX=10090 GN=Ap2m1 PE=1 SV=1; AP-2 complex subunit mu OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1; AP-2 complex subunit mu (Fragment) OS=Mus musculus OX=10090 GN=Ap2m1 PE=1 SV=1; MHD domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ap2m1 PE=2 SV=1 0 2 2 0.1933 0 1 1 1 645.88708 1290.76689 1290.76694 -0.03 -0.00002 0/0 0 0 15240039 HCD 30 MS2 10.79195 1339.2 110 78.5861 24376 24376 24370 QEplus033719.raw F4 1356.4 982.3 1306.9 1409.9 1322.8 1656.7 520 2.69 1 FALSE 0.0006294 0.009489 0.413 -250 123832 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECMVMRDPTTK [R].ecMVMRDPTTk.[R] N-Term(TMT6plex); C2(Carbamidomethyl); K11(TMT6plex) 7 Q920Q6 RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1 Q920Q6-3; Q920Q6-2; Q32LZ4; Q8CD63; Q920Q6; B1AT10; B1AT13 Isoform 3 of RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2; Isoform 2 of RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2; Msi2h protein OS=Mus musculus OX=10090 GN=Msi2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1; RNA-binding protein Musashi homolog 2 (Fragment) OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1; RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1 1 3 3 0.6486 0 1 1 1 609.31891 1825.94217 1825.93747 2.58 0.00157 0/0 0 0 11312626 HCD 30 MS2 49.02142 1254.3 110 78.5909 24378 24378 24370 QEplus033719.raw F4 1286.5 971.3 1399.4 1252.3 1141.8 1474.4 293 2.59 1 FALSE 0.002024 0.03541 0.192 -250 123841 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVVMHPMPR [K].mVVMHPMPR.[V] N-Term(TMT6plex) 7 E9QAI5 Aspartate carbamoyltransferase OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1 B2RQC6-2; E9QAI5; O88862; Q80VF8; B2RQC6; Q9CWQ9; G3UWN2 Isoform 2 of CAD protein OS=Mus musculus OX=10090 GN=Cad; Aspartate carbamoyltransferase OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1; Aspartate transcarbamylase (Fragment) OS=Mus musculus OX=10090 GN=Cad PE=2 SV=1; CAD protein (Fragment) OS=Mus musculus OX=10090 GN=Cad PE=2 SV=2; CAD protein OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1; Aspartate carbamoyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Cad PE=2 SV=2; CAD protein OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1 0 3 3 0.5212 0 1 1 1 442.90683 1326.70594 1326.70461 1 0.00044 0/0 0 0 9773066 HCD 30 MS2 30.20148 551.3 110 78.5934 24379 24379 24370 QEplus033719.raw F4 555.6 377.1 532.4 441 563.4 838 229 3.78 1 FALSE 1.14E-05 0.000113 0.847 -250 123850 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TGGSEIVVTNK [K].tGGSEIVVTNk.[N] N-Term(TMT6plex); K11(TMT6plex) 4 P46935 E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus OX=10090 GN=Nedd4 PE=1 SV=3 P46935; V9GXS6; A0A571BDN7; A0JNZ0 E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus OX=10090 GN=Nedd4 PE=1 SV=3; E3 ubiquitin-protein ligase NEDD4 (Fragment) OS=Mus musculus OX=10090 GN=Nedd4 PE=1 SV=1; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Nedd4 PE=1 SV=1; Nedd4 protein OS=Mus musculus OX=10090 GN=Nedd4 PE=2 SV=1 0 2 2 0.6478 0 1 1 1 781.96216 1562.91704 1562.91539 1.05 0.00082 0/0 0 0 9262955 HCD 30 MS2 32.28069 551.2 110 78.5959 24380 24380 24370 QEplus033719.raw F4 543.2 564.9 707.2 314.9 702 474.7 413 4.23 1 FALSE 1.14E-05 2.49E-10 1.922 -250 123860 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KKEELLK [K].kkEELLk.[Q] N-Term(TMT6plex); K1(TMT6plex); K2(TMT6plex); K7(TMT6plex) 4 Q6ZWV7 60S ribosomal protein L35 OS=Mus musculus OX=10090 GN=Rpl35 PE=1 SV=1 F6YXU0; Q3UJ88; Q3U1U4; Q6ZWV7 "60S ribosomal protein L35 (Fragment) OS=Mus musculus OX=10090 GN=Gm49368 PE=3 SV=1; Integrin_alpha2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Predicted gene, 49368 OS=Mus musculus OX=10090 GN=Gm49368 PE=1 SV=1; 60S ribosomal protein L35 OS=Mus musculus OX=10090 GN=Rpl35 PE=1 SV=1" 2 4 4 0.46 0 1 1 1 451.80768 1804.20888 1804.20777 0.62 0.00028 0/0 0 0 37228616 HCD 30 MS2 25.82952 962.4 34.931 78.6079 24384 24384 24381 QEplus033719.raw F4 967.3 802.5 979.5 869.9 1222.2 932.9 78 2 1 FALSE 0.007155 0.1125 -0.026 -250 123870 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAGTDEFTLNR [K].gAGTDEFTLNR.[I] N-Term(TMT6plex) 5 O35639 Annexin A3 OS=Mus musculus OX=10090 GN=Anxa3 PE=1 SV=4 O35639; Q8C1X9; Q3TLP4; Q3TFK4; Q3U737 Annexin A3 OS=Mus musculus OX=10090 GN=Anxa3 PE=1 SV=4; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1 0 2 2 0.2861 0 1 1 1 705.36511 1409.72295 1409.72222 0.51 0.00036 0/0 0 0 26258794 HCD 30 MS2 0 886.2 110 78.6104 24385 24385 24381 QEplus033719.raw F4 854.9 928.9 967.1 611.7 1144.3 810.2 212 4.23 1 FALSE 1.14E-05 1.50E-09 1.774 -250 123898 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EGVKFDESEK [K].eGVkFDESEk.[T] N-Term(TMT6plex); K4(TMT6plex); K10(TMT6plex) 6 Q3UBU0 HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1 Q3TUD6; Q3UBU0; Q91V38; Q8CCY5; F7C312; P08113 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Heat shock protein 90, beta (Grp94), member 1 OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Endoplasmin (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=1; Endoplasmin OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=2" 1 2 2 0.606 0 1 1 1 928.02576 1855.04424 1855.0416 1.42 0.00132 0/0 0 0 7327503 HCD 30 MS2 0 471.2 110 78.6203 24389 24389 24381 QEplus033719.raw F4 450.2 470.5 559.4 335.2 559.6 452.5 423 3.35 1 FALSE 1.14E-05 4.68E-07 1.3 -250 123903 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLEETVAK [K].gLEETVAk.[E] N-Term(TMT6plex); K8(TMT6plex) 1 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 0 3 3 0.4341 0 1 1 1 435.59967 1304.78446 1304.78259 1.43 0.00062 0/0 0 0 8179114 HCD 30 MS2 77.46938 1222.4 105.167 78.6227 24390 24390 24381 QEplus033719.raw F4 1350.8 959.8 1292.5 1100.4 1468.2 1162.7 528 2.58 1 FALSE 0.0008445 0.01178 0.377 -250 123908 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERDIEALK [R].eRDIEALk.[S] N-Term(TMT6plex); K8(TMT6plex) 1 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 Q8BMK4 Cytoskeleton-associated protein 4 OS=Mus musculus OX=10090 GN=Ckap4 PE=1 SV=2 1 2 2 0.4305 0 1 1 1 716.4325 1431.85771 1431.85715 0.39 0.00028 0/0 0 0 6863015 HCD 30 MS2 17.09007 477.5 110 78.6252 24391 24391 24381 QEplus033719.raw F4 470.2 445.4 494 340.9 654.1 460.3 459 2.95 1 FALSE 1.14E-05 0.000237 0.785 -250 123912 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAQPSITDNK [K].vAQPSITDNk.[D] N-Term(TMT6plex); K10(TMT6plex) 7 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q6KAM8; I7HPX4; B7FAV1; F6Z2C0; B9EKP5; Q8BTM8; B7FAU9 "MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=4 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=8; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.4822 0 1 1 1 510.96912 1530.8928 1530.88918 2.36 0.00121 0/0 0 0 5865349 HCD 30 MS2 67.9328 1182.4 108.543 78.6325 24393 24393 24392 QEplus033719.raw F4 1154.3 998.6 1313.4 1003.6 1211.8 1412.6 473 2.53 1 FALSE 0.001351 0.0192 0.288 -250 123920 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGVTGSPEASISGSK [K].gGVTGSPEASISGSk.[G] N-Term(TMT6plex); K15(TMT6plex) 4 E9Q616; Q6UIL4 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1;AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1 E9Q616; Q6UIL4; Q8CGE7; Q8VDN3 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1 0 2 2 0.7627 0 1 1 1 896.49872 1791.99016 1791.98526 2.73 0.00245 0/0 0 0 9246228 HCD 30 MS2 0 454.7 110 78.635 24394 24394 24392 QEplus033719.raw F4 463.5 486.2 514.6 326.6 515.4 421.6 449 5.52 2 FALSE 1.14E-05 6.31E-16 3.273 -250 123928 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGIVLGADTR [K].dGIVLGADTR.[A] N-Term(TMT6plex) 2 Q5D098 Proteasome subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Psmb7 PE=2 SV=1 Q5D098; P70195 Proteasome subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Psmb7 PE=2 SV=1; Proteasome subunit beta type-7 OS=Mus musculus OX=10090 GN=Psmb7 PE=1 SV=1 0 2 2 0.1468 0 1 1 1 623.35413 1245.70098 1245.70003 0.76 0.00047 0/0 0 0 54400492 HCD 30 MS2 17.9148 762.1 34.938 78.6373 24395 24395 24392 QEplus033719.raw F4 901.2 619.2 785.7 633.2 823.7 809.8 350 2.93 1 FALSE 1.14E-05 4.56E-07 1.302 -250 123935 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYSDPPLK [R].sYSDPPLk.[F] N-Term(TMT6plex); K8(TMT6plex) 4 Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 J3QMT0; Q9Z2X1-2; J3QM80; Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=8; Isoform 2 of Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf; Heterogeneous nuclear ribonucleoprotein F (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 0 2 2 0.5282 0 1 1 1 682.89496 1364.78264 1364.78259 0.04 0.00003 0/0 0 0 35348256 HCD 30 MS2 4.137596 1056.1 60.3 78.6418 24397 24397 24392 QEplus033719.raw F4 1090.9 1104.1 1190.5 791.6 1218.6 940.9 418 3.54 1 FALSE 1.14E-05 0.0001615 0.817 -250 123945 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MVQNSDFVR [R].mVQNSDFVR.[Y] N-Term(TMT6plex) 3 Q61576 Peptidyl-prolyl cis-trans isomerase FKBP10 OS=Mus musculus OX=10090 GN=Fkbp10 PE=1 SV=2 Q61576; A2A4H9; Q3UNJ3 Peptidyl-prolyl cis-trans isomerase FKBP10 OS=Mus musculus OX=10090 GN=Fkbp10 PE=1 SV=2; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp10 PE=1 SV=1; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp10 PE=2 SV=1 0 2 2 0.533 0 1 1 1 662.84833 1324.68938 1324.68809 0.98 0.00065 0/0 0 0 31077410 HCD 30 MS2 14.71638 730.4 68.428 78.6441 24398 24398 24392 QEplus033719.raw F4 674.2 624 762 642.5 853.4 826.4 224 3.49 1 FALSE 1.14E-05 2.59E-06 1.159 -250 123952 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NVTAIQGPGGK [R].nVTAIQGPGGk.[W] N-Term(TMT6plex); K11(TMT6plex) 2 A0A1L1STE6 "Isocitrate dehydrogenase [NAD] subunit, mitochondrial OS=Mus musculus OX=10090 GN=Idh3a PE=1 SV=1" A0A1L1STE6; Q9D6R2 "Isocitrate dehydrogenase [NAD] subunit, mitochondrial OS=Mus musculus OX=10090 GN=Idh3a PE=1 SV=1; Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Idh3a PE=1 SV=1" 0 2 2 0.7153 0 1 1 1 750.45099 1499.8947 1499.8946 0.07 0.00005 0/0 0 0 28463370 HCD 30 MS2 28.36521 969.6 110 78.6466 24399 24399 24392 QEplus033719.raw F4 1020.5 717.1 1022.8 1035.1 861 1161.1 329 4.04 1 FALSE 1.14E-05 2.96E-08 1.528 -250 123959 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTDDVKK [K].lTDDVkk.[E] N-Term(TMT6plex); K6(TMT6plex); K7(TMT6plex) 5 Q80W39 "Splicing factor 3b, subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1" Q80W39; Q3UAI4; Q3UBH2; Q3UQU5; Q3UJB0 "Splicing factor 3b, subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; SAP domain-containing protein OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; SAP domain-containing protein OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; SAP domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sf3b2 PE=2 SV=1; Splicing factor 3b, subunit 2 OS=Mus musculus OX=10090 GN=Sf3b2 PE=1 SV=1" 1 3 3 0.2653 0 1 1 1 502.65546 1505.95182 1505.95061 0.8 0.0004 0/0 0 0 25724642 HCD 30 MS2 33.46594 1390.8 61.946 78.6489 24400 24400 24392 QEplus033719.raw F4 1430 1133.4 1424 1127.6 1907.6 1322.5 229 1.96 1 FALSE 0.0004392 0.007517 0.448 -250 123975 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RFDDAVVQSDMK [R].rFDDAVVQSDmk.[H] N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex) 13 Q3TEK2 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 Q3TRH3; Q3UDS0; Q3TEK2; Q3U9L2; D3Z5E2; Q3TH56; Q3TZJ3; P63017; Q3TQ13; Q3TB63; Q504P4; Q3ULM1; Q3UBA6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Heat shock cognate 71 kDa protein OS=Mus musculus OX=10090 GN=Hspa8 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hspa8 PE=2 SV=1 1 3 3 0.7113 0 1 1 1 629.00146 1884.98984 1884.98897 0.46 0.00029 0/0 0 0 10912236 HCD 30 MS2 37.47038 968.2 110 78.6612 24404 24404 24403 QEplus033719.raw F4 887.1 881.1 1120.1 711.3 1166.3 1043.1 326 4.33 1 FALSE 1.14E-05 4.96E-08 1.485 -250 123993 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLEETVAK [K].gLEETVAk.[E] N-Term(TMT6plex); K8(TMT6plex) 1 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 0 2 2 0.4718 0 1 1 1 652.89551 1304.78374 1304.78259 0.88 0.00058 0/0 0 0 51948008 HCD 30 MS2 31.26831 1073.1 38.769 78.6681 24407 24407 24403 QEplus033719.raw F4 1179.1 763.4 1184 1132.5 900.9 1278.5 528 3.01 1 FALSE 1.14E-05 0.0004388 0.733 -250 124000 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TIPYSDK [K].tIPYSDk.[L] N-Term(TMT6plex); K7(TMT6plex) 15 Q8CAQ8; A0A0U1RP81 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1;MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; Q8CAQ8-4; Q3U7N2; E9PVS5; Q8CAQ8; E9QAY6; Q8CAQ8-2; Q3TZK4; A0A0U1RP81; Q3TVZ5; E9Q800; Q8CAQ8-3; Q3TQL4; Q3TEY5; A0A1B0GX08 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; Isoform 4 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 0 2 2 0.315 0 1 1 1 641.37695 1281.74663 1281.74547 0.9 0.00058 0/0 0 0 41867560 HCD 30 MS2 30.92014 1105.5 39.182 78.6703 24408 24408 24403 QEplus033719.raw F4 1044.4 915.1 1239.2 1159 1039.7 1235.9 353 2.54 2 FALSE 0.0006126 0.00905 0.42 -250 124007 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDHLAEK [R].lDHLAEk.[F] N-Term(TMT6plex); K7(TMT6plex) 7 Q3ULT2; A1BN54; Q7TPR4 Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1;Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1;Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1 A0A1L1SV25; Q3UDJ7; Q3ULT2; A1BN54; Q7TPR4; Q1A602; E9Q2W9 Alpha-actinin-4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1; Alpha actinin 1a OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1; Alpha-actinin-1 OS=Mus musculus OX=10090 GN=Actn1 PE=1 SV=1; Non-muscle alpha-actinin 4 OS=Mus musculus OX=10090 GN=Actn4 PE=2 SV=1; Alpha-actinin-4 (Fragment) OS=Mus musculus OX=10090 GN=Actn4 PE=1 SV=1 0 3 3 0.3786 0 1 1 1 428.59607 1283.77365 1283.77236 1.01 0.00043 0/0 0 0 38461548 HCD 30 MS2 8.824428 686.2 31.102 78.6726 24409 24409 24403 QEplus033719.raw F4 805.5 641.9 724.6 529.9 757.9 657.1 234 2.8 3 FALSE 9.73E-05 0.002982 0.559 -250 124034 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous STQGAEEVLK [R].sTQGAEEVLk.[T] N-Term(TMT6plex); K10(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.3738 0 1 1 1 760.44214 1519.877 1519.87319 2.5 0.0019 0/0 0 0 9860400 HCD 30 MS2 75.01243 953.2 57.187 78.6797 24412 24412 24403 QEplus033719.raw F4 1003.7 920.4 988.1 768.9 1114.5 923.5 434 3.21 2 FALSE 1.14E-05 3.88E-08 1.505 -250 124043 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QMELEK [K].qMELEk.[A] N-Term(TMT6plex); K6(TMT6plex) 1 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 0 3 3 0.1926 0 1 1 1 412.57385 1235.707 1235.70698 0.02 0.00001 0/0 0 0 11786320 HCD 30 MS2 25.88997 800.8 110 78.6821 24413 24413 24403 QEplus033719.raw F4 906.7 291.1 682.3 1134.3 521.6 1268.7 488 2.44 1 FALSE 0.009687 0.1869 -0.123 -250 124048 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFETPEK [K].eFETPEk.[A] N-Term(TMT6plex); K7(TMT6plex) 3 Q6DFW4 Nucleolar protein 58 OS=Mus musculus OX=10090 GN=Nop58 PE=1 SV=1 A0A087WNW0; A0A0A0MQ76; Q6DFW4 Nucleolar protein 58 OS=Mus musculus OX=10090 GN=Nop58 PE=1 SV=1; Nucleolar protein 58 OS=Mus musculus OX=10090 GN=Nop58 PE=1 SV=1; Nucleolar protein 58 OS=Mus musculus OX=10090 GN=Nop58 PE=1 SV=1 0 2 2 0.4459 0 1 1 1 669.36945 1337.73161 1337.7353 -2.76 -0.00184 0/0 0 0 13989506 HCD 30 MS2 31.15167 1279.8 110 78.6894 24415 24415 24414 QEplus033719.raw F4 1304.6 1152.1 1434.6 1092.1 1285.8 1409.7 297 2.22 1 FALSE 0.002981 0.05785 0.12 -250 124051 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ILQEDPTNTAAR [R].iLQEDPTNTAAR.[K] N-Term(TMT6plex) 1 Q9CRD2 ER membrane protein complex subunit 2 OS=Mus musculus OX=10090 GN=Emc2 PE=1 SV=1 Q9CRD2 ER membrane protein complex subunit 2 OS=Mus musculus OX=10090 GN=Emc2 PE=1 SV=1 0 2 2 0.5906 0 1 1 1 779.4248 1557.84233 1557.8434 -0.69 -0.00053 0/0 0 0 6841214 HCD 30 MS2 0 340.5 110 78.692 24416 24416 24414 QEplus033719.raw F4 338.4 297.5 383.7 291.9 353.1 378.4 342 3.81 1 FALSE 1.14E-05 8.90E-12 2.196 -250 124060 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALDGDFTEENR [K].aLDGDFTEENR.[A] N-Term(TMT6plex) 5 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q0V930; Q3UHS6; Q3TBC3; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.74 0 1 1 1 748.36609 1495.7249 1495.72262 1.53 0.00114 0/0 0 0 37459064 HCD 30 MS2 31.27012 720.2 53.522 78.6943 24417 24417 24414 QEplus033719.raw F4 769 489.5 718.4 872.4 612.1 859.9 89 4.27 1 FALSE 1.14E-05 9.72E-09 1.62 -250 124073 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYSDPPLK [R].sYSDPPLk.[F] N-Term(TMT6plex); K8(TMT6plex) 4 Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 J3QMT0; Q9Z2X1-2; J3QM80; Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=8; Isoform 2 of Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf; Heterogeneous nuclear ribonucleoprotein F (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 0 3 3 0.381 0 1 1 1 455.59933 1364.78345 1364.78259 0.63 0.00029 0/0 0 0 22488808 HCD 30 MS2 55.54917 906.4 47.604 78.6988 24419 24419 24414 QEplus033719.raw F4 974 733.5 913 641.8 1124.2 1052.1 431 2.31 1 FALSE 0.001001 0.01325 0.355 -250 124086 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVCIEK [K].tVcIEk.[N] N-Term(TMT6plex); C3(Carbamidomethyl); K6(TMT6plex) 2 O08749 "Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Dld PE=1 SV=2" O08749; Q3TIE8 "Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Dld PE=1 SV=2; Dihydrolipoyl dehydrogenase OS=Mus musculus OX=10090 GN=Dld PE=2 SV=1" 0 2 2 0.2161 0 1 1 1 604.35925 1207.71123 1207.71207 -0.69 -0.00042 0/0 0 0 19203902 HCD 30 MS2 26.87367 1673.8 88.855 78.7036 24421 24421 24414 QEplus033719.raw F4 1852.7 1310.6 1790 1656.6 1539.5 1893.5 428 2.36 1 FALSE 0.003168 0.06193 0.109 -250 124096 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDNDTFTVK [RK].nDNDTFTVk.[Y] N-Term(TMT6plex); K9(TMT6plex) 8 B9EKP5; Q8VHX6 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1;Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3" Q3U7N9; Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; Q8VHX6-2; Q8VHX6; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.6306 0 1 1 1 756.40552 1511.80376 1511.81059 -4.52 -0.00342 0/0 0 0 15542097 HCD 30 MS2 0 1071.6 110 78.7061 24422 24422 24414 QEplus033719.raw F4 1058.7 1035.5 1111.6 791.5 1345.1 1087.3 312 3.6 2 FALSE 1.14E-05 8.81E-06 1.058 -250 124100 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHLQIAR [K].iHLQIAR.[Q] N-Term(TMT6plex) 1 A0A3B2WBC6 DNA-directed RNA polymerase II subunit GRINL1A OS=Mus musculus OX=10090 GN=Polr2m PE=4 SV=1 A0A3B2WBC6 DNA-directed RNA polymerase II subunit GRINL1A OS=Mus musculus OX=10090 GN=Polr2m PE=4 SV=1 0 3 3 0.1356 0 1 1 1 360.56741 1079.68769 1079.68868 -0.92 -0.00033 0/0 0 0 13041426 HCD 30 MS2 0 198.7 110 78.7086 24423 24423 24414 QEplus033719.raw F4 205.7 157.9 236.9 130 241.4 220.3 19 3.54 1 FALSE 0.001421 0.02013 0.28 -250 124108 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNAACAALDK [R].tNAAcAALDk.[K] N-Term(TMT6plex); C5(Carbamidomethyl); K10(TMT6plex) 6 Q5SX40; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q5SX40; G3UW82; B2RWX0; I6L963; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 3 3 0.5852 0 1 1 1 498.27875 1492.82169 1492.81938 1.54 0.00077 0/0 0 0 12755959 HCD 30 MS2 38.63773 1083.5 95.859 78.7109 24424 24424 24414 QEplus033719.raw F4 1280 529.8 887 1536.7 731.1 1536.6 374 3.52 2 FALSE 1.14E-05 1.26E-05 1.028 -250 124118 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVSQAVEHINK [K].gVSQAVEHINk.[T] N-Term(TMT6plex); K11(TMT6plex) 3 Q5FW97 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1 Q8CF78; Q5FW97; B1ARR7 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; Alpha-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 0 2 2 0.7038 0 1 1 1 820.48071 1639.95415 1639.95318 0.59 0.00049 0/0 0 0 14235980 HCD 30 MS2 34.49627 575.8 110 78.7207 24427 24427 24425 QEplus033719.raw F4 592.1 552.5 649.7 458.8 692 509.8 391 4.49 1 FALSE 1.14E-05 6.20E-10 1.846 -250 124140 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KAAEVLNK [K].kAAEVLNk.[H] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 9 Q570Z0 MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 Q3TW40; A0A3Q4EH91; Q9D0E1-2; Q3TL61; B8JK33; B8JK32; Q570Z0; Q9D0E1; A0A1S6GWJ8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Isoform 2 of Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=1; MKIAA4193 protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein M OS=Mus musculus OX=10090 GN=Hnrnpm PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Hnrnpm PE=2 SV=1 1 3 3 0.3444 0 1 1 1 520.67529 1560.01133 1560.00879 1.63 0.00085 0/0 0 0 18057066 HCD 30 MS2 54.09822 1018.6 46.629 78.7275 24430 24430 24425 QEplus033719.raw F4 934.7 1009.4 1173.3 822.1 1242.5 929.7 312 3.6 1 FALSE 5.44E-05 0.001981 0.599 -250 124149 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MQLQEACMR [K].mQLQEAcMR.[K] N-Term(TMT6plex); C7(Carbamidomethyl) 1 Q1XH17 Tripartite motif-containing protein 72 OS=Mus musculus OX=10090 GN=Trim72 PE=1 SV=1 Q1XH17 Tripartite motif-containing protein 72 OS=Mus musculus OX=10090 GN=Trim72 PE=1 SV=1 0 2 2 0.7471 0 1 1 1 698.34119 1395.6751 1395.67443 0.48 0.00033 0/0 0 0 13410001 HCD 30 MS2 0 649.8 110 78.73 24431 24431 24425 QEplus033719.raw F4 808.9 158.1 557 1186.1 179.9 1008.7 73 3.48 1 FALSE 1.14E-05 6.52E-05 0.893 -250 124156 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGVTGSPEASISGSK [K].gGVTGSPEASISGSk.[G] N-Term(TMT6plex); K15(TMT6plex) 4 E9Q616; Q6UIL4 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1;AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1 E9Q616; Q6UIL4; Q8CGE7; Q8VDN3 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1 0 3 3 0.7016 0 1 1 1 598.00006 1791.98563 1791.98526 0.2 0.00012 0/0 0 0 41961016 HCD 30 MS2 20.34208 793 39.58 78.7345 24433 24433 24425 QEplus033719.raw F4 773.9 746 897.6 660.1 877 803.4 396 4.49 2 FALSE 1.14E-05 1.48E-07 1.395 -250 124162 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MLYSSCK [R].mLYSSck.[S-] N-Term(TMT6plex); C6(Carbamidomethyl); K7(TMT6plex) 4 Q9Z0P5; Q91YR1 Twinfilin-2 OS=Mus musculus OX=10090 GN=Twf2 PE=1 SV=1;Twinfilin-1 OS=Mus musculus OX=10090 GN=Twf1 PE=1 SV=2 Q9Z0P5; Q91YR1; Q9Z0P5-2; A0A1L1STC8 Twinfilin-2 OS=Mus musculus OX=10090 GN=Twf2 PE=1 SV=1; Twinfilin-1 OS=Mus musculus OX=10090 GN=Twf1 PE=1 SV=2; Isoform 2 of Twinfilin-2 OS=Mus musculus OX=10090 GN=Twf2; Twinfilin-2 (Fragment) OS=Mus musculus OX=10090 GN=Twf2 PE=1 SV=1 0 2 2 0.6085 0 1 1 1 673.86353 1346.71977 1346.72125 -1.1 -0.00074 0/0 0 0 30161152 HCD 30 MS2 29.97984 1201.8 60.947 78.7368 24434 24434 24425 QEplus033719.raw F4 1138.9 1137.5 1355.2 967.8 1346.1 1265.5 266 2.58 2 FALSE 0.0007724 0.01075 0.392 -250 124169 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMGGPYGGGNYGPGGSGGSGGYGGR [R].nMGGPYGGGNYGPGGSGGSGGYGGR.[S] N-Term(TMT6plex) 4 O88569 Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2 O88569-3; B7ZP22; O88569; O88569-2 Isoform 3 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=2 SV=1; Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 PE=1 SV=2; Isoform 2 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Mus musculus OX=10090 GN=Hnrnpa2b1 0 2 2 0.9099 0 1 1 1 1210.04041 2419.07353 2419.06828 2.17 0.00262 0/0 0 0 9075600 HCD 30 MS2 0 274.4 110 78.7393 24435 24435 24425 QEplus033719.raw F4 253.3 290.7 321.6 248 320.4 212.6 25 8.77 1 FALSE 1.14E-05 6.31E-16 6.248 -250 124185 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MMIPDCQR [R].mMIPDcQR.[R] N-Term(TMT6plex); C6(Carbamidomethyl) 2 Q5I0U7 Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=1 A0A1Y7VJ48; Q5I0U7 Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=1; Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=1 0 2 2 0.6895 0 1 1 1 640.31171 1279.61614 1279.61585 0.22 0.00014 0/0 0 0 57383704 HCD 30 MS2 12.28424 846.8 36.803 78.7514 24439 24439 24436 QEplus033719.raw F4 731.3 811.9 991.4 588.6 1063.2 894.5 75 2.77 1 FALSE 0.0004091 0.00741 0.45 -250 124192 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQVMGK [K].vQVMGk.[V] N-Term(TMT6plex); K6(TMT6plex) 5 Q3U0U5 Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1 Q3UNQ0; Q3TC53; P40124; Q3U0U5; Q3UVJ2 Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein 1 OS=Mus musculus OX=10090 GN=Cap1 PE=1 SV=4; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1; Adenylyl cyclase-associated protein OS=Mus musculus OX=10090 GN=Cap1 PE=2 SV=1 0 2 2 0.3439 0 1 1 1 560.35107 1119.69487 1119.69602 -1.03 -0.00057 0/0 0 0 35581372 HCD 30 MS2 34.28539 989.7 31.329 78.7537 24440 24440 24436 QEplus033719.raw F4 923.1 957.8 1109.9 692 1182.6 1072.8 137 2.21 1 FALSE 0.005006 0.08694 0.043 -250 124211 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELSEYVR [K].eLSEYVR.[N] N-Term(TMT6plex) 3 A0A087WQS2 Basic leucine zipper and W2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1 A0A087WQS2; Q9CQC6; A0A087WPF9 Basic leucine zipper and W2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1; Basic leucine zipper and W2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1; Basic leucine zipper and W2 domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1 0 2 2 0.4622 0 1 1 1 562.81201 1124.61675 1124.6149 1.64 0.00092 0/0 0 0 25516524 HCD 30 MS2 37.52126 1100.7 60.646 78.7582 24442 24442 24436 QEplus033719.raw F4 1053.9 1005.2 1241.2 783.1 1298.2 1222.4 161 2.51 1 FALSE 0.0003996 0.007103 0.456 -250 124216 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQAVTNPNNTFYATK [K].rQAVTNPNNTFYATk.[R] N-Term(TMT6plex); K15(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 1 3 3 0.7875 0 1 1 1 728.40436 2183.19852 2183.19732 0.55 0.0004 0/0 0 0 8241457.5 HCD 30 MS2 0 368.2 110 78.7607 24443 24443 24436 QEplus033719.raw F4 391 311.2 423.2 359.1 310.7 413.9 441 7.81 1 FALSE 1.14E-05 6.31E-16 3.446 -250 124229 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAGTDEFTLNR [K].gAGTDEFTLNR.[I] N-Term(TMT6plex) 5 O35639 Annexin A3 OS=Mus musculus OX=10090 GN=Anxa3 PE=1 SV=4 O35639; Q8C1X9; Q3TLP4; Q3TFK4; Q3U737 Annexin A3 OS=Mus musculus OX=10090 GN=Anxa3 PE=1 SV=4; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa3 PE=2 SV=1 0 3 3 0.5964 0 1 1 1 470.57986 1409.72504 1409.72222 2 0.00094 0/0 0 0 11073627 HCD 30 MS2 53.49158 928.8 110 78.7657 24445 24445 24436 QEplus033719.raw F4 869.3 895.1 1029.6 718.2 1038.8 1021.8 213 3.37 1 FALSE 1.14E-05 1.56E-05 1.011 -250 124238 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSEVVLSGDDEDYQR [R].sSEVVLSGDDEDYQR.[I] N-Term(TMT6plex) 3 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 E9Q616; A0A494BBD5; Q8BRB8 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; AHNAK nucleoprotein (desmoyokin) (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; PDZ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1 0 2 2 0.7566 0 1 1 1 964.45844 1927.90959 1927.90825 0.7 0.00067 0/0 0 0 5334734 HCD 30 MS2 0 81.2 110 78.7683 24446 24446 24436 QEplus033719.raw F4 66.3 86.7 100.2 56.6 90 87.2 77 5.71 1 FALSE 1.14E-05 6.31E-16 3.106 -250 124246 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVSQAVEHINK [K].gVSQAVEHINk.[T] N-Term(TMT6plex); K11(TMT6plex) 3 Q5FW97 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1 Q8CF78; Q5FW97; B1ARR7 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; Alpha-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 0 3 3 0.6686 0 1 1 1 547.32336 1639.95554 1639.95318 1.44 0.00079 0/0 0 0 81503352 HCD 30 MS2 25.21611 596.5 17.229 78.7756 24448 24448 24447 QEplus033719.raw F4 589.2 518.2 663.3 483.5 764.4 560.1 390 5.13 1 FALSE 1.14E-05 7.15E-11 2.025 -250 124251 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYIPPKGETK [K].tYIPPkGETk.[K] N-Term(TMT6plex); K6(TMT6plex); K10(TMT6plex) 12 Q8BNM0 High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 Q8BQ02; Q8BNM0; Q6P202; Q58EV5; Q3UJK0; Q8C7C4; D3YZ18; D3YVC6; Q3UBK2; A0A0J9YUZ4; A0A0J9YUD8; Q497Z6 High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=8; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein B1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 1 3 3 0.5493 0 1 1 1 607.70813 1821.10984 1821.1089 0.52 0.00031 0/0 0 0 53182092 HCD 30 MS2 4.122581 960.5 28.383 78.7778 24449 24449 24447 QEplus033719.raw F4 861.9 1160.7 1069.3 603.2 1272.1 795.7 315 3.04 1 FALSE 1.14E-05 1.07E-05 1.041 -250 124259 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NDNDTFTVK [RK].nDNDTFTVk.[Y] N-Term(TMT6plex); K9(TMT6plex) 8 B9EKP5; Q8VHX6 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1;Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3" Q3U7N9; Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; Q8VHX6-2; Q8VHX6; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Isoform 2 of Filamin-C OS=Mus musculus OX=10090 GN=Flnc; Filamin-C OS=Mus musculus OX=10090 GN=Flnc PE=1 SV=3; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.6514 0 1 1 1 756.4093 1511.81133 1511.81059 0.49 0.00037 0/0 0 0 48906704 HCD 30 MS2 6.542214 831.4 42.542 78.7801 24450 24450 24447 QEplus033719.raw F4 821.4 827.8 856.9 594.5 1067 820.7 315 3.7 2 FALSE 1.14E-05 4.57E-06 1.112 -250 124264 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TNAACAALDK [R].tNAAcAALDk.[K] N-Term(TMT6plex); C5(Carbamidomethyl); K10(TMT6plex) 6 Q5SX40; P13542 Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; Q5SX40; G3UW82; B2RWX0; I6L963; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.5928 0 1 1 1 746.91418 1492.82109 1492.81938 1.14 0.00085 0/0 0 0 43449364 HCD 30 MS2 15.64363 816.4 47.201 78.7824 24451 24451 24447 QEplus033719.raw F4 943.3 214.2 503.7 1716.9 267.6 1252.8 374 4.15 2 FALSE 1.14E-05 0.000208 0.796 -250 124270 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NTDEMVELR [R].nTDEMVELR.[I] N-Term(TMT6plex) 19 Q5FWJ5 Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1 P61979-3; Q3U9Q3; A0A286YEC4; H3BJ43; A0A286YCM2; A0A286YDH1; Q3TUA1; Q5FWJ5; H3BKD0; H3BK96; Q8BT23; P61979; A0A286YE41; A0A286YDM3; B2M1R6; Q3U6X2; Q3TL71; Q3TJ38; H3BKI8 Isoform 3 of Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus OX=10090 GN=Hnrnpk PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein K (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpk PE=1 SV=1 0 2 2 0.5111 0 1 1 1 668.34216 1335.67705 1335.67758 -0.4 -0.00027 0/0 0 0 35599592 HCD 30 MS2 2.790259 826.3 56.673 78.7847 24452 24452 24447 QEplus033719.raw F4 832.9 784.1 939.1 615.7 974.3 811.7 193 3.15 1 FALSE 1.14E-05 0.000162 0.817 -250 124277 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVVTMEHSAK [K].vVVTMEHSAk.[G] N-Term(TMT6plex); K10(TMT6plex) 4 Q9D0K2 "Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Mus musculus OX=10090 GN=Oxct1 PE=1 SV=1" Q3U9P7; Q3UK61; Q9D0K2; Q3UJQ9 "Succinyl-CoA:3-ketoacid-coenzyme A transferase OS=Mus musculus OX=10090 GN=Oxct1 PE=2 SV=1; Succinyl-CoA:3-ketoacid-coenzyme A transferase OS=Mus musculus OX=10090 GN=Oxct1 PE=2 SV=1; Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Mus musculus OX=10090 GN=Oxct1 PE=1 SV=1; Succinyl-CoA:3-ketoacid-coenzyme A transferase OS=Mus musculus OX=10090 GN=Oxct1 PE=1 SV=1" 0 3 3 0.7125 0 1 1 1 520.3064 1558.90464 1558.90272 1.23 0.00064 0/0 0 0 30824826 HCD 30 MS2 66.78655 1071.8 45.829 78.787 24453 24453 24447 QEplus033719.raw F4 1028.1 1100.5 1245.3 795.6 1276.8 984.5 364 4.73 1 FALSE 1.14E-05 1.10E-05 1.04 -250 124284 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPQVCGELK [K].gPQVcGELk.[G] N-Term(TMT6plex); C5(Carbamidomethyl); K9(TMT6plex) 6 E9Q616; Q6UIL4 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1;AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1 A0PJF4; E9Q616; Q6UIL4; Q8CGE7; Q8VDN3; Q8BKS2 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=2 0 3 3 0.6793 0 1 1 1 482.61136 1445.81952 1445.81866 0.6 0.00029 0/0 0 0 26946092 HCD 30 MS2 37.12807 783 35.925 78.7892 24454 24454 24447 QEplus033719.raw F4 766.2 758.9 833.4 645.5 955.2 738.9 333 4.21 2 FALSE 1.14E-05 1.63E-05 1.007 -250 124291 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IPDEELR [K].iPDEELR.[Q] N-Term(TMT6plex) 8 Q3TRJ7 SH3-domain GRB2-like 1 OS=Mus musculus OX=10090 GN=Sh3gl1 PE=1 SV=1 Q3TJB4; Q8BXU5; Q62420; Q3TRJ7; F6ZL13; A2ALV3; A0A3B2W7K0; Q3U3C4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Sh3gl1 PE=2 SV=1; Endophilin-A1 OS=Mus musculus OX=10090 GN=Sh3gl2 PE=1 SV=1; Endophilin-A1 OS=Mus musculus OX=10090 GN=Sh3gl2 PE=1 SV=2; SH3-domain GRB2-like 1 OS=Mus musculus OX=10090 GN=Sh3gl1 PE=1 SV=1; Endophilin-A1 (Fragment) OS=Mus musculus OX=10090 GN=Sh3gl2 PE=1 SV=1; Endophilin-A1 OS=Mus musculus OX=10090 GN=Sh3gl2 PE=1 SV=1; Endophilin-A2 OS=Mus musculus OX=10090 GN=Sh3gl1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Sh3gl1 PE=2 SV=1 0 2 2 0.3891 0 1 1 1 550.8114 1100.61553 1100.6149 0.56 0.00031 0/0 0 0 23840266 HCD 30 MS2 32.77395 1030.5 58.764 78.7915 24455 24455 24447 QEplus033719.raw F4 990.4 962.1 1175.1 689.9 1315.4 1049.9 162 2.57 1 FALSE 0.001869 0.03151 0.209 -250 124308 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TFEINPR [K].tFEINPR.[H] N-Term(TMT6plex) 7 Q3UBU0 HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1 Q3TUD6; Q3UBU0; Q91V38; Q9CW12; Q8CCY5; F7C312; P08113 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Heat shock protein 90, beta (Grp94), member 1 OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Endoplasmin (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=1; Endoplasmin OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=2" 0 2 2 0.4375 0 1 1 1 553.31482 1105.62236 1105.62032 1.84 0.00102 0/0 0 0 15512714 HCD 30 MS2 11.33345 1434 96.654 78.796 24457 24457 24447 QEplus033719.raw F4 1533.4 1211.8 1485.5 1183 1719 1471.2 262 2.24 1 FALSE 0.001266 0.01727 0.307 -250 124314 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LITGMDR [R].lITGMDR.[G] N-Term(TMT6plex) 3 Q61576 Peptidyl-prolyl cis-trans isomerase FKBP10 OS=Mus musculus OX=10090 GN=Fkbp10 PE=1 SV=2 Q61576; A2A4H9; Q3UNJ3 Peptidyl-prolyl cis-trans isomerase FKBP10 OS=Mus musculus OX=10090 GN=Fkbp10 PE=1 SV=2; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp10 PE=1 SV=1; Peptidylprolyl isomerase OS=Mus musculus OX=10090 GN=Fkbp10 PE=2 SV=1 0 2 2 0.3397 0 1 1 1 517.79724 1034.58721 1034.58658 0.6 0.00031 0/0 0 0 18256514 HCD 30 MS2 45.13797 1126.7 50.062 78.8033 24459 24459 24458 QEplus033719.raw F4 1050 896.8 1207.8 991.4 1306.9 1307.2 232 2.62 1 FALSE 0.0009633 0.01308 0.358 -250 124324 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEMEQAQK [R].lEMEQAQk.[A] N-Term(TMT6plex); K8(TMT6plex) 3 A0A0X1KG67 ER membrane protein complex subunit 10 OS=Mus musculus OX=10090 GN=Emc10 PE=1 SV=1 A0A0X1KG67; Q3TAS6; Q3TAS6-2 ER membrane protein complex subunit 10 OS=Mus musculus OX=10090 GN=Emc10 PE=1 SV=1; ER membrane protein complex subunit 10 OS=Mus musculus OX=10090 GN=Emc10 PE=2 SV=2; Isoform 2 of ER membrane protein complex subunit 10 OS=Mus musculus OX=10090 GN=Emc10 0 2 2 0.4575 0 1 1 1 717.90436 1434.80144 1434.80267 -0.86 -0.00062 0/0 0 0 10499253 HCD 30 MS2 14.87303 815.2 110 78.8058 24460 24460 24458 QEplus033719.raw F4 928.8 673 793.6 670.1 1029.4 796.2 455 3.41 1 FALSE 1.14E-05 0.0001695 0.813 -250 124351 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQSLEGEK [K].vQSLEGEk.[L] N-Term(TMT6plex); K8(TMT6plex) 2 B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 P14873; B2RQQ5 Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=1 SV=2; Microtubule-associated protein 1B OS=Mus musculus OX=10090 GN=Map1b PE=2 SV=1 0 2 2 0.2697 0 1 1 1 674.3985 1347.78972 1347.7884 0.98 0.00066 0/0 0 0 17259864 HCD 30 MS2 49.24237 1289.4 73.628 78.8126 24463 24463 24458 QEplus033719.raw F4 1233.8 1065.6 1506 1055.1 1381.5 1494.7 511 3.04 1 FALSE 1.14E-05 0.0001005 0.857 -250 124369 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGDIIGVEGNPGK [R].rGDIIGVEGNPGk.[T] N-Term(TMT6plex); K13(TMT6plex) 5 Q8CFK5 Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1 Q8CFK5; Q8C292; Q8C1V4; Q8R2P8; Q3TIV6 Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=2 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=1 SV=1; Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars PE=1 SV=1 1 3 3 0.6945 0 1 1 1 590.68085 1770.02799 1770.0274 0.33 0.0002 0/0 0 0 13876477 HCD 30 MS2 54.38997 1164.9 96.037 78.8171 24465 24465 24458 QEplus033719.raw F4 1268.5 887.4 1218.1 863.6 1232 1520 393 4.91 1 FALSE 1.14E-05 5.08E-12 2.243 -250 124377 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAAGPPGATGFPGAAGR [R].gAAGPPGATGFPGAAGR.[V] N-Term(TMT6plex) 1 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 2 2 0.7407 0 1 1 1 820.93933 1640.87139 1640.87062 0.47 0.00038 0/0 0 0 12553574 HCD 30 MS2 29.9066 523.1 110 78.8197 24466 24466 24458 QEplus033719.raw F4 481.5 579.9 637.1 265 668.6 506.4 300 5.36 1 FALSE 1.14E-05 1.11E-14 2.748 -250 124403 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SPPGQVTEAVK [K].sPPGQVTEAVk.[V] N-Term(TMT6plex); K11(TMT6plex) 5 Q3UDY1 Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1 Q3TCL2; D3YVJ7; Q3ULP0; Q3UDY1; Q5U415 "Aldo_ket_red domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1; Aldo-keto reductase family 1, member B3 (aldose reductase) (Fragment) OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1; Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1; Aldo_ket_red domain-containing protein OS=Mus musculus OX=10090 GN=Akr1b3 PE=1 SV=1; Aldo-keto reductase family 1, member B3 (Aldose reductase) OS=Mus musculus OX=10090 GN=Akr1b3 PE=2 SV=1" 0 2 2 0.6271 0 1 1 1 785.96436 1570.92143 1570.92048 0.61 0.00048 0/0 0 0 52663328 HCD 30 MS2 4.381793 554.5 45.297 78.8315 24470 24470 24469 QEplus033719.raw F4 510.6 330.6 625.5 670.6 384.4 805.5 342 3.62 1 FALSE 1.14E-05 1.55E-05 1.011 -250 124412 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEIATK [K].mEIATk.[D] N-Term(TMT6plex); K6(TMT6plex) 3 Q4FK49 Inorganic diphosphatase OS=Mus musculus OX=10090 GN=Ppa1 PE=1 SV=1 Q8BTY3; Q3UA53; Q4FK49 Inorganic diphosphatase OS=Mus musculus OX=10090 GN=Ppa1 PE=2 SV=1; Inorganic diphosphatase OS=Mus musculus OX=10090 GN=Ppa1 PE=2 SV=1; Inorganic diphosphatase OS=Mus musculus OX=10090 GN=Ppa1 PE=1 SV=1 0 2 2 0.326 0 1 1 1 575.8493 1150.69133 1150.6906 0.63 0.00036 0/0 0 0 28712282 HCD 30 MS2 18.69795 1778.7 87.026 78.8338 24471 24471 24469 QEplus033719.raw F4 1961.4 1456.1 1806.7 1503.3 1995.8 1949.1 215 2.27 1 FALSE 0.008863 0.1572 -0.095 -250 124421 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFNKYDTDGSK [K].eFNkYDTDGSk.[W] N-Term(TMT6plex); K4(TMT6plex); K11(TMT6plex) 4 Q3TGW0 Actin-like protein 3 OS=Mus musculus OX=10090 GN=Actr3 PE=2 SV=1 Q3TGW0; Q3TWJ4; Q3TGE1; Q99JY9 Actin-like protein 3 OS=Mus musculus OX=10090 GN=Actr3 PE=2 SV=1; Actin-like protein 3 OS=Mus musculus OX=10090 GN=Actr3 PE=2 SV=1; Actin-like protein 3 OS=Mus musculus OX=10090 GN=Actr3 PE=2 SV=1; Actin-related protein 3 OS=Mus musculus OX=10090 GN=Actr3 PE=1 SV=3 1 3 3 0.6484 0 1 1 1 664.36133 1991.06943 1991.06888 0.28 0.00018 0/0 0 0 30412968 HCD 30 MS2 0 1752.1 110 78.8363 24472 24472 24469 QEplus033719.raw F4 1635.8 1895.6 1993.9 1437.2 2079.8 1470 415 2.73 1 FALSE 1.14E-05 0.0001687 0.814 -250 124426 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQQLGLK [K].eQQLGLk.[Q] N-Term(TMT6plex); K7(TMT6plex) 3 D3Z440 COP9 signalosome complex subunit 7a (Fragment) OS=Mus musculus OX=10090 GN=Cops7a PE=1 SV=8 D3Z440; Q9CZ04-2; Q9CZ04 COP9 signalosome complex subunit 7a (Fragment) OS=Mus musculus OX=10090 GN=Cops7a PE=1 SV=8; Isoform 2 of COP9 signalosome complex subunit 7a OS=Mus musculus OX=10090 GN=Cops7a; COP9 signalosome complex subunit 7a OS=Mus musculus OX=10090 GN=Cops7a PE=1 SV=2 0 2 2 0.2734 0 1 1 1 637.39917 1273.79106 1273.78801 2.4 0.00153 0/0 0 0 23448738 HCD 30 MS2 57.33947 1394.2 70.771 78.8386 24473 24473 24469 QEplus033719.raw F4 1542.4 1077.6 1396.2 1070.6 1843.2 1435.5 448 2.67 1 FALSE 0.0002518 0.005117 0.498 -250 124460 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KKEELLK [K].kkEELLk.[Q] N-Term(TMT6plex); K1(TMT6plex); K2(TMT6plex); K7(TMT6plex) 4 Q6ZWV7 60S ribosomal protein L35 OS=Mus musculus OX=10090 GN=Rpl35 PE=1 SV=1 F6YXU0; Q3UJ88; Q3U1U4; Q6ZWV7 "60S ribosomal protein L35 (Fragment) OS=Mus musculus OX=10090 GN=Gm49368 PE=3 SV=1; Integrin_alpha2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 PE=2 SV=1; Predicted gene, 49368 OS=Mus musculus OX=10090 GN=Gm49368 PE=1 SV=1; 60S ribosomal protein L35 OS=Mus musculus OX=10090 GN=Rpl35 PE=1 SV=1" 2 2 2 0.3587 0 1 1 1 902.60889 1804.2105 1804.20777 1.51 0.00136 0/0 0 0 6295378 HCD 30 MS2 0 330.5 110 78.8511 24478 24478 24469 QEplus033719.raw F4 289.3 235.9 333 336.1 448 340.5 76 2.76 1 FALSE 0.001736 0.02931 0.22 -250 124469 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSPQNLVTK [R].gSPQNLVTk.[D] N-Term(TMT6plex); K9(TMT6plex) 4 Q60847 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3 Q60847; E9PX70; Q60847-5; Q60847-2 Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3; Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=1 SV=1; Isoform 5 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1; Isoform 2 of Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 0 2 2 0.4564 0 1 1 1 701.42804 1401.8488 1401.84659 1.58 0.00111 0/0 0 0 5804436 HCD 30 MS2 58.72072 864.2 110 78.8537 24479 24479 24469 QEplus033719.raw F4 911.8 739.6 841.3 553.9 1410.1 728.6 488 2.87 1 FALSE 1.14E-05 0.0003582 0.751 -250 124476 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CACTYGFTGPQCER [R].cAcTYGFTGPQcER.[D] N-Term(TMT6plex); C1(Carbamidomethyl); C3(Carbamidomethyl); C12(Carbamidomethyl) 3 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554; Q60784 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2; Fibrillin-1 (Fragment) OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1 0 2 2 0.867 0 1 1 1 968.42358 1935.83989 1935.8349 2.58 0.00249 0/0 0 0 4513091.5 HCD 30 MS2 0 221.6 110 78.861 24481 24481 24480 QEplus033719.raw F4 204.8 143.2 265.4 313 124.8 278.3 11 5.64 1 FALSE 1.14E-05 2.03E-11 2.128 -250 124488 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FATHAAALSVR [R].fATHAAALSVR.[N] N-Term(TMT6plex) 2 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q8VIJ6; Q3TZL2 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1" 0 3 3 0.6511 0 1 1 1 458.26804 1372.78955 1372.78985 -0.21 -0.0001 0/0 0 0 71011944 HCD 30 MS2 29.01161 545.6 15.885 78.8657 24483 24483 24480 QEplus033719.raw F4 616.7 388.6 562.2 364.8 591.3 749.8 367 4.27 1 FALSE 1.14E-05 8.67E-09 1.629 -250 124505 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SSEVVLSGDDEDYQR [R].sSEVVLSGDDEDYQR.[I] N-Term(TMT6plex) 3 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 E9Q616; A0A494BBD5; Q8BRB8 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; AHNAK nucleoprotein (desmoyokin) (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; PDZ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1 0 3 3 0.7143 0 1 1 1 643.30737 1927.90757 1927.90825 -0.35 -0.00023 0/0 0 0 27342672 HCD 30 MS2 19.51844 1008.1 110 78.8705 24485 24485 24480 QEplus033719.raw F4 1206.8 769.7 987.1 901.8 1185.3 997.7 67 4.69 1 FALSE 1.14E-05 3.05E-07 1.335 -250 124514 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQTVAEK [K].lQTVAEk.[E] N-Term(TMT6plex); K7(TMT6plex) 4 Q3U1J4 DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=2 A0A494B987; Q91YC8; Q3ULS8; Q3U1J4 DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=1; DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=2 SV=1; DNA damage-binding protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Ddb1 PE=2 SV=1; DNA damage-binding protein 1 OS=Mus musculus OX=10090 GN=Ddb1 PE=1 SV=2 0 2 2 0.3246 0 1 1 1 623.89368 1246.78008 1246.77711 2.38 0.00148 0/0 0 0 18976810 HCD 30 MS2 51.43164 1596.7 73.431 78.8728 24486 24486 24480 QEplus033719.raw F4 1617.9 1317 1793.3 1308.2 1679.4 1864.5 394 2.28 1 FALSE 0.0005174 0.00811 0.437 -250 124523 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERLTEELK [K].eRLTEELk.[E] N-Term(TMT6plex); K8(TMT6plex) 1 Q9CU62 Structural maintenance of chromosomes protein 1A OS=Mus musculus OX=10090 GN=Smc1a PE=1 SV=4 Q9CU62 Structural maintenance of chromosomes protein 1A OS=Mus musculus OX=10090 GN=Smc1a PE=1 SV=4 1 3 3 0.3436 0 1 1 1 492.63358 1475.88617 1475.88336 1.9 0.00094 0/0 0 0 10191388 HCD 30 MS2 28.79139 1011.6 110 78.8753 24487 24487 24480 QEplus033719.raw F4 982.3 867.4 1076 805.6 1165.7 1172.5 428 2.91 1 FALSE 0.0001603 0.003817 0.532 -250 124535 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FATHAAALSVR [R].fATHAAALSVR.[N] N-Term(TMT6plex) 2 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q8VIJ6; Q3TZL2 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1" 0 2 2 0.6232 0 1 1 1 686.89832 1372.78935 1372.78985 -0.36 -0.00025 0/0 0 0 7036409 HCD 30 MS2 34.39526 580.8 110 78.8803 24489 24489 24480 QEplus033719.raw F4 612 494 609.9 493.3 691.3 584 367 4.06 1 FALSE 1.14E-05 7.09E-06 1.076 -250 124544 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVVTMEHSAK [K].vVVTMEHSAk.[G] N-Term(TMT6plex); K10(TMT6plex) 4 Q9D0K2 "Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Mus musculus OX=10090 GN=Oxct1 PE=1 SV=1" Q3U9P7; Q3UK61; Q9D0K2; Q3UJQ9 "Succinyl-CoA:3-ketoacid-coenzyme A transferase OS=Mus musculus OX=10090 GN=Oxct1 PE=2 SV=1; Succinyl-CoA:3-ketoacid-coenzyme A transferase OS=Mus musculus OX=10090 GN=Oxct1 PE=2 SV=1; Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Mus musculus OX=10090 GN=Oxct1 PE=1 SV=1; Succinyl-CoA:3-ketoacid-coenzyme A transferase OS=Mus musculus OX=10090 GN=Oxct1 PE=1 SV=1" 0 2 2 0.7174 0 1 1 1 779.95721 1558.90715 1558.90272 2.84 0.00222 0/0 0 0 5219836 HCD 30 MS2 46.967 407.7 110 78.8828 24490 24490 24480 QEplus033719.raw F4 401.4 391.2 482.2 299.8 483 388.6 425 4.07 1 FALSE 1.14E-05 6.18E-09 1.657 -250 124553 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GFMDGK [K].gFMDGk.[Q] N-Term(TMT6plex); K6(TMT6plex) 19 Q69ZX3; Q5SV64; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q6URW6-2; Q69ZX3; Q80T68; A0A2R8VHF9; Q8BLI3; Q8BWI3; A0A338P6K2; O08638-2; O08638; Q5SV64; Q3UH59; Q8VDD5; A0A140LI60; Q6URW6; E9QPE7; Q8BLI1; K3W4R2; Q6URW6-3; Q61879 Isoform 2 of Myosin-14 OS=Mus musculus OX=10090 GN=Myh14; MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-14 (Fragment) OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Myosin-14 OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-14 OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Isoform 3 of Myosin-14 OS=Mus musculus OX=10090 GN=Myh14; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 0 3 3 0.5023 0 1 1 1 371.54434 1112.61847 1112.61744 0.93 0.00035 0/0 0 0 2763588.75 HCD 30 MS2 51.3427 253.9 110 78.8901 24492 24492 24491 QEplus033719.raw F4 247.3 190 277.9 229.9 272.6 305.5 127 2.13 3 FALSE 0.003101 0.06041 0.113 -250 124563 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGDGVDKDEAK [K].lGDGVDkDEAk.[A] N-Term(TMT6plex); K7(TMT6plex); K11(TMT6plex) 1 Q921H9 Cytochrome c oxidase assembly factor 7 OS=Mus musculus OX=10090 GN=Coa7 PE=1 SV=1 Q921H9 Cytochrome c oxidase assembly factor 7 OS=Mus musculus OX=10090 GN=Coa7 PE=1 SV=1 1 3 3 0.2751 0 1 1 1 612.02161 1834.05027 1834.0525 -1.22 -0.00075 0/0 0 0 12790101 HCD 30 MS2 64.61445 1226.7 110 78.8926 24493 24493 24491 QEplus033719.raw F4 1240.1 927.3 1288.1 1369.7 1051.6 1483.2 429 1.89 1 FALSE 0.001231 0.0166 0.314 -250 124571 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNVVEQEK [K].vNVVEQEk.[I] N-Term(TMT6plex); K8(TMT6plex) 5 Q5FW97; B0QZL1 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1;2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 Q8CF78; Q5FW97; B0QZL1; Q6PHC1; B1ARR7 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1; Alpha-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 0 2 2 0.6025 0 1 1 1 701.9231 1402.83891 1402.8306 5.93 0.00416 0/0 0 0 15625346 HCD 30 MS2 39.85914 1202.3 84.662 78.8972 24495 24495 24491 QEplus033719.raw F4 1317.9 982.4 1145.7 869.7 1795.8 1102.4 484 3.22 2 FALSE 1.14E-05 0.0001408 0.829 -250 124578 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YHIGIK [K].yHIGIk.[N] N-Term(TMT6plex); K6(TMT6plex) 9 Q3TW28 Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2 PE=2 SV=1 Q64514; Q3V451; Q3V3M8; Q64514-2; Q3TW28; Q3U4M7; A0A087WRC0; Q3TB11; Q05DJ9 Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2 PE=1 SV=3; Peptidase_S8 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Peptidase_S8 domain-containing protein OS=Mus musculus OX=10090 PE=2 SV=1; Isoform Short of Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2; Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2 PE=2 SV=1; Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2 PE=2 SV=1; Tripeptidyl-peptidase 2 OS=Mus musculus OX=10090 GN=Tpp2 PE=1 SV=1; Tripeptidyl-peptidase 2 (Fragment) OS=Mus musculus OX=10090 GN=Tpp2 PE=2 SV=1; Tpp2 protein OS=Mus musculus OX=10090 GN=Tpp2 PE=1 SV=1 0 3 3 0.2544 0 1 1 1 396.92175 1188.75071 1188.7505 0.17 0.00007 0/0 0 0 12284156 HCD 30 MS2 13.75028 725.7 86.431 78.8994 24496 24496 24491 QEplus033719.raw F4 627.5 542.1 868.5 631.4 702.5 982 500 3.38 1 FALSE 0.001514 0.02294 0.258 -250 124595 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNVVEQEK [K].vNVVEQEk.[I] N-Term(TMT6plex); K8(TMT6plex) 5 Q5FW97; B0QZL1 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1;2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 Q8CF78; Q5FW97; B0QZL1; Q6PHC1; B1ARR7 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1; Alpha-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 0 3 3 0.5862 0 1 1 1 468.28101 1402.82846 1402.8306 -1.52 -0.00071 0/0 0 0 7221305 HCD 30 MS2 35.44241 1248.5 110 78.9044 24498 24498 24491 QEplus033719.raw F4 1293 1098.6 1265.1 1080.9 1442 1311.2 540 2.9 2 FALSE 0.0008805 0.01228 0.369 -250 124604 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KATDAEADVASLNRR [K].kATDAEADVASLNRR.[I] N-Term(TMT6plex); K1(TMT6plex) 17 P58774; A2AIM4; P58774-2; E9Q450 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 Q9D1R6; Q91VH3; Q8BSH3; E9Q452; P58774; F8WID5; S4R2U0; A2AIM4; Q3SX28; P58774-2; A2AIM5; E9Q454; Q61344; E9Q450; Q564G1; Q8BP43; P58771 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=8; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 2 3 3 0.6221 0 1 1 1 692.39148 2075.15989 2075.16094 -0.51 -0.00035 0/0 0 0 8494229 HCD 30 MS2 15.58218 469.3 110 78.9095 24500 24500 24491 QEplus033719.raw F4 484.5 326.4 544.7 417 427.4 615.7 481 5.61 4 TRUE 1.14E-05 6.31E-16 3.661 -250 124629 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GESLGIK [K].gESLGIk.[H] N-Term(TMT6plex); K7(TMT6plex) 1 P97315 Cysteine and glycine-rich protein 1 OS=Mus musculus OX=10090 GN=Csrp1 PE=1 SV=3 P97315 Cysteine and glycine-rich protein 1 OS=Mus musculus OX=10090 GN=Csrp1 PE=1 SV=3 0 2 2 0.0519 0 1 1 1 581.36627 1161.72527 1161.72434 0.79 0.00046 0/0 0 0 42609392 HCD 30 MS2 26.9108 1122.4 27.688 78.9238 24505 24505 24502 QEplus033719.raw F4 1231.8 800.8 1162.9 788.4 1537.1 1213.2 517 2.12 1 FALSE 0.000565 0.008642 0.427 -250 124639 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GAAGPPGATGFPGAAGR [R].gAAGPPGATGFPGAAGR.[V] N-Term(TMT6plex) 1 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 3 3 0.7894 0 1 1 1 547.62909 1640.87271 1640.87062 1.28 0.0007 0/0 0 0 36825552 HCD 30 MS2 58.4454 813.2 35.875 78.926 24506 24506 24502 QEplus033719.raw F4 808.3 738.9 862.5 611.1 1047.9 810.3 300 5.27 1 FALSE 1.14E-05 2.68E-10 1.916 -250 124652 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AEDGENYAIKK [K].aEDGENYAIkk.[Q] N-Term(TMT6plex); K10(TMT6plex); K11(TMT6plex) 2 Q5I0U7 Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=1 A0A1Y7VJ48; Q5I0U7 Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=1; Tubulin-specific chaperone A OS=Mus musculus OX=10090 GN=Tbca PE=1 SV=1 1 3 3 0.4932 0 1 1 1 642.36951 1925.09397 1925.0947 -0.38 -0.00025 0/0 0 0 20974710 HCD 30 MS2 78.75574 1169.8 47.72 78.9306 24508 24508 24502 QEplus033719.raw F4 1148.2 1007.9 1295 853.4 1518.7 1195.4 420 2.19 1 FALSE 1.14E-05 7.93E-06 1.067 -250 124696 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMSVIAHVDHGK [R].nMSVIAHVDHGk.[S] N-Term(TMT6plex); K12(TMT6plex) 15 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q8C153; P58252; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3UZ14; Q3TK17; Q3TLB1; Q3TWX1; Q3TX47; O89069 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 0 4 4 0.7306 0 1 1 1 442.25031 1765.97939 1765.97834 0.59 0.00026 0/0 0 0 30118044 HCD 30 MS2 13.30521 519.8 55.284 78.9547 24517 24517 24513 QEplus033719.raw F4 676.4 381.8 608.6 505.1 519.9 426.9 413 4.9 1 FALSE 1.14E-05 8.78E-10 1.818 -250 124720 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDNPFPK [R].gDNPFPk.[N] N-Term(TMT6plex); K7(TMT6plex) 4 Q540D7 Alcohol dehydrogenase [NADP(+)] OS=Mus musculus OX=10090 GN=Akr1a1 PE=1 SV=1 Q80XJ7; Q540D7; Q3UJW9; B1AXW3 Alcohol dehydrogenase [NADP(+)] OS=Mus musculus OX=10090 GN=Akr1a1 PE=2 SV=1; Alcohol dehydrogenase [NADP(+)] OS=Mus musculus OX=10090 GN=Akr1a1 PE=1 SV=1; Alcohol dehydrogenase [NADP(+)] OS=Mus musculus OX=10090 GN=Akr1a1 PE=2 SV=1; Aldo-keto reductase family 1 member A1 (Fragment) OS=Mus musculus OX=10090 GN=Akr1a1 PE=1 SV=8 0 3 3 0.3299 0 1 1 1 411.57318 1232.70499 1232.70394 0.85 0.00035 0/0 0 0 7251663 HCD 30 MS2 22.91975 584 110 78.9619 24520 24520 24513 QEplus033719.raw F4 602.1 506.6 594.5 475 719.6 606.3 342 1.94 1 FALSE 0.002628 0.05211 0.136 -250 124735 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SCVDVNECDMGAPCEQR [R].scVDVNEcDMGAPcEQR.[C] N-Term(TMT6plex); C2(Carbamidomethyl); C8(Carbamidomethyl); C14(Carbamidomethyl) 8 Q542X5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Efemp2 PE=2 SV=1 E9Q3F3; E9Q3N9; E9Q2A0; Q542X5; G5E8D6; Q9JM06; E9Q2T8; A0A494BBF0 EGF-containing fibulin-like extracellular matrix protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Efemp2 PE=1 SV=1; EGF-containing fibulin-like extracellular matrix protein 2 OS=Mus musculus OX=10090 GN=Efemp2 PE=1 SV=1; EGF-containing fibulin-like extracellular matrix protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Efemp2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Efemp2 PE=2 SV=1; EGF-containing fibulin-like extracellular matrix protein 2 OS=Mus musculus OX=10090 GN=Efemp2 PE=1 SV=1; EGF-containing fibulin-like extracellular matrix protein 2 OS=Mus musculus OX=10090 GN=Efemp2 PE=2 SV=1; EGF-containing fibulin-like extracellular matrix protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Efemp2 PE=1 SV=1; EGF-containing fibulin-like extracellular matrix protein 2 OS=Mus musculus OX=10090 GN=Efemp2 PE=1 SV=1 0 3 3 0.9602 0 1 1 1 752.65155 2255.9401 2255.93509 2.22 0.00167 0/0 0 0 3831958.25 HCD 30 MS2 0 118.2 110 78.9669 24522 24522 24513 QEplus033719.raw F4 125.3 100.1 122.3 90.1 140.3 130.8 5 6.79 1 FALSE 1.14E-05 7.01E-14 2.596 -250 124737 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QYTMELER [K].qYTMELER.[L] N-Term(TMT6plex) 2 Q8CGY8 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Mus musculus OX=10090 GN=Ogt PE=1 SV=2 Q8CGY8-2; Q8CGY8 Isoform 2 of UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Mus musculus OX=10090 GN=Ogt; UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Mus musculus OX=10090 GN=Ogt PE=1 SV=2 0 2 2 0.3099 0 1 1 1 649.83356 1298.65984 1298.6612 -1.05 -0.00068 0/0 0 0 2976550.5 HCD 30 MS2 44.2305 466.2 110 78.9694 24523 24523 24513 QEplus033719.raw F4 432.8 410 531.7 360.7 537.8 524.1 150 1.71 1 FALSE 0.001028 0.01345 0.353 -250 124744 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KATDAEADVASLNRR [K].kATDAEADVASLNRR.[I] N-Term(TMT6plex); K1(TMT6plex) 17 P58774; A2AIM4; P58774-2; E9Q450 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 Q9D1R6; Q91VH3; Q8BSH3; E9Q452; P58774; F8WID5; S4R2U0; A2AIM4; Q3SX28; P58774-2; A2AIM5; E9Q454; Q61344; E9Q450; Q564G1; Q8BP43; P58771 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=8; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 2 4 4 0.6562 0 1 1 1 519.54626 2075.16323 2075.16094 1.1 0.00057 0/0 0 0 164080688 HCD 30 MS2 5.415815 511.2 7.664 78.9767 24525 24525 24524 QEplus033719.raw F4 571.5 308.3 598.8 470.9 410.3 707.5 470 4.77 4 TRUE 1.14E-05 5.50E-14 2.616 -250 124750 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AALGQGVAPVHTQK [K].aALGQGVAPVHTQk.[T] N-Term(TMT6plex); K14(TMT6plex) 7 O08784 Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 H3BIX0; Q05BH6; F6R3V4; O08784; Q7TPZ2; Q6PFZ6; H3BL37 Treacle protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1; Tcof1 protein (Fragment) OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Tcof1 protein OS=Mus musculus OX=10090 GN=Tcof1 PE=2 SV=1; Treacle protein OS=Mus musculus OX=10090 GN=Tcof1 PE=1 SV=1 0 3 3 0.6675 0 1 1 1 612.36731 1835.08738 1835.09034 -1.61 -0.00099 0/0 0 0 19104144 HCD 30 MS2 19.58123 1040.2 83.389 78.979 24526 24526 24524 QEplus033719.raw F4 1049.1 790.1 1148.5 995.4 1006 1252.2 400 4.21 1 FALSE 1.14E-05 6.01E-12 2.229 -250 124755 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNVVEQEK [K].vNVVEQEk.[I] N-Term(TMT6plex); K8(TMT6plex) 5 Q5FW97; B0QZL1 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1;2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 Q8CF78; Q5FW97; B0QZL1; Q6PHC1; B1ARR7 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1; Alpha-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 0 2 2 0.6247 0 1 1 1 701.91949 1402.83171 1402.8306 0.79 0.00056 0/0 0 0 103435872 HCD 30 MS2 9.852088 853.5 19.109 78.9813 24527 24527 24524 QEplus033719.raw F4 973.4 655.7 877.6 740 980.8 893.6 506 3.65 2 FALSE 1.14E-05 0.0001579 0.819 -250 124761 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTLYEAVR [R].dTLYEAVR.[E] N-Term(TMT6plex) 9 Q5XJF6 Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1 P53026; A0A3B2WDD2; Q5XJF6; A0A3B2W820; A0A3B2W824; Q3U561; D6RE43; A0A3B2WBL1; A0A3B2WCA5 60S ribosomal protein L10a OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=3; Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1; Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1; 60S ribosomal protein L10a OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1; 60S ribosomal protein L10a (Fragment) OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1; Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=2 SV=1; 60S ribosomal protein L10a OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1; Ribosomal protein OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1; 60S ribosomal protein L10a OS=Mus musculus OX=10090 GN=Rpl10a PE=1 SV=1 0 2 2 0.3885 0 1 1 1 598.33008 1195.65288 1195.65202 0.72 0.00043 0/0 0 0 76716920 HCD 30 MS2 18.94952 850.7 22.734 78.9836 24528 24528 24524 QEplus033719.raw F4 809.5 748.7 989.4 732.2 927.2 897 210 2.96 1 FALSE 0.0001603 0.003568 0.54 -250 124774 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPVAMVIPAR [R].rPVAMVIPAR.[R] N-Term(TMT6plex) 4 Q9QXS1 Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q499F9; A0A0R4J218; Q9QXS1-2; Q9QXS1 Plec1 protein (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 0 3 3 0.4795 0 1 1 1 446.94662 1338.82532 1338.82413 0.89 0.0004 0/0 0 0 18077892 HCD 30 MS2 39.47336 428.9 52.886 78.9881 24530 24530 24524 QEplus033719.raw F4 440.9 344.3 449.4 344.7 448.9 545.2 229 4.38 1 FALSE 1.14E-05 5.37E-08 1.479 -250 124814 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEEQAALHK [R].lEEQAALHk.[A] N-Term(TMT6plex); K9(TMT6plex) 23 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.596 0 1 1 1 499.63428 1496.88828 1496.8837 3.06 0.00153 0/0 0 0 41919128 HCD 30 MS2 7.708261 874.6 37.66 79.0046 24536 24536 24535 QEplus033719.raw F4 929.5 585.3 859.4 721.4 819.9 1331.8 341 3.96 2 FALSE 1.14E-05 2.99E-07 1.337 -250 124820 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ENMTLQPK [K].eNMTLQPk.[S] N-Term(TMT6plex); K8(TMT6plex) 3 Q64511 DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2 Q3TR62; Q8BRY5; Q64511 DNA topoisomerase 2 (Fragment) OS=Mus musculus OX=10090 GN=Top2b PE=2 SV=1; DNA topoisomerase 2 (Fragment) OS=Mus musculus OX=10090 GN=Top2b PE=2 SV=1; DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2 0 2 2 0.5888 0 1 1 1 709.90814 1418.80901 1418.80776 0.88 0.00063 0/0 0 0 7171403 HCD 30 MS2 20.79078 578.2 110 79.0071 24537 24537 24535 QEplus033719.raw F4 581.4 533.1 624.8 473.9 664.8 591.5 495 3.04 1 FALSE 5.44E-05 0.002645 0.571 -250 124848 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANIDVSGPK [K].aNIDVSGPk.[V] N-Term(TMT6plex); K9(TMT6plex) 5 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 A0PJF4; Q6UL10; E9Q616; A0JLR7; Q61484 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Desmoyokin (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1 0 2 2 0.6448 0 1 1 1 679.90637 1358.80547 1358.80439 0.8 0.00054 0/0 0 0 37358640 HCD 30 MS2 2.735941 989.7 63.038 79.0139 24540 24540 24535 QEplus033719.raw F4 1025.2 1102.9 1098.4 738.1 1055.4 918.1 377 3.35 1 FALSE 1.14E-05 5.04E-06 1.104 -250 124860 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIDFHK [R].gIDFHk.[Q] N-Term(TMT6plex); K6(TMT6plex) 5 Q8CIE6 Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2 Q3TAU7; Q8CIE6; F8WHL2; Q9ET41; Q8BTF0 Uncharacterized protein OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=2; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=1 SV=1; Coatomer protein alpha subunit (Fragment) OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1; Coatomer subunit alpha OS=Mus musculus OX=10090 GN=Copa PE=2 SV=1 0 3 3 0.2415 0 1 1 1 392.23801 1174.69947 1174.69846 0.85 0.00033 0/0 0 0 20478372 HCD 30 MS2 5.333562 680.5 56.378 79.0184 24542 24542 24535 QEplus033719.raw F4 765.5 610.1 738.7 511.5 811.7 645.3 343 2.07 1 FALSE 0.001778 0.0306 0.214 -250 124868 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGSLGENQIKDEK [K].gGSLGENQIkDEk.[I] N-Term(TMT6plex); K10(TMT6plex); K13(TMT6plex) 7 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; Q3UGC3; E9Q0M9; S4R1T7; E9Q9F3; E9QA16; Q3TUS1 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1 1 3 3 0.5095 0 1 1 1 688.0639 2062.17716 2062.17474 1.17 0.0008 0/0 0 0 11378935 HCD 30 MS2 15.89801 1062.4 110 79.0209 24543 24543 24535 QEplus033719.raw F4 1130.8 1098.7 1164.2 595 1475 910.6 445 3.16 1 FALSE 1.14E-05 5.70E-11 2.043 -250 124875 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AFGPGLQGGNAGSPAR [K].aFGPGLQGGNAGSPAR.[F] N-Term(TMT6plex) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.7059 0 1 1 1 843.45093 1685.89458 1685.89208 1.48 0.00125 0/0 0 0 9290289 HCD 30 MS2 0 451.3 110 79.0235 24544 24544 24535 QEplus033719.raw F4 431.6 489.1 504.2 274.7 643.8 364.5 304 5.44 1 FALSE 1.14E-05 6.31E-16 3.11 -250 124884 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DISTLNSGK [R].dISTLNSGk.[K] N-Term(TMT6plex); K9(TMT6plex) 5 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q99LY0; Q91YQ5; Q5RKP4; Q3U900; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 0 2 2 0.5457 0 1 1 1 696.90894 1392.81059 1392.80987 0.52 0.00036 0/0 0 0 8548488 HCD 30 MS2 29.68646 656.2 110 79.026 24545 24545 24535 QEplus033719.raw F4 616.3 587.9 697.1 554.7 753 727.9 379 3.5 1 FALSE 1.14E-05 1.46E-06 1.206 -250 124894 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLLGDAPNDPR [R].gLLGDAPNDPR.[G] N-Term(TMT6plex) 5 Q8C7E9 Cleavage stimulation factor subunit 2 tau variant OS=Mus musculus OX=10090 GN=Cstf2t PE=1 SV=2 Q8BIQ5-2; B3V097; Q8BIQ5; Q8C7E9; A2AEK3 Isoform 2 of Cleavage stimulation factor subunit 2 OS=Mus musculus OX=10090 GN=Cstf2; BetaCstF-64 variant 3 OS=Mus musculus OX=10090 GN=Cstf2 PE=2 SV=1; Cleavage stimulation factor subunit 2 OS=Mus musculus OX=10090 GN=Cstf2 PE=1 SV=2; Cleavage stimulation factor subunit 2 tau variant OS=Mus musculus OX=10090 GN=Cstf2t PE=1 SV=2; Cleavage stimulation factor subunit 2 (Fragment) OS=Mus musculus OX=10090 GN=Cstf2 PE=1 SV=1 0 2 2 0.6947 0 1 1 1 677.37103 1353.73479 1353.73239 1.77 0.0012 0/0 0 0 8368499.5 HCD 30 MS2 20.52383 552.1 110 79.0333 24547 24547 24546 QEplus033719.raw F4 595.3 502.8 602.4 412.6 631.8 567.6 298 3.21 1 FALSE 1.14E-05 1.41E-05 1.019 -250 124901 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RPGPPSTPEASAITK [K].rPGPPSTPEASAITk.[D] N-Term(TMT6plex); K15(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.6978 0 1 1 1 656.38312 1967.1348 1967.1326 1.12 0.00073 0/0 0 0 5872428 HCD 30 MS2 60.14001 532.5 110 79.0358 24548 24548 24546 QEplus033719.raw F4 607.1 330.6 483.9 666.3 409.9 697.2 414 5.79 2 FALSE 1.14E-05 6.31E-16 3.424 -250 124908 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YATLATVSR [K].yATLATVSR.[C] N-Term(TMT6plex) 1 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 2 2 0.6979 0 1 1 1 605.85352 1210.69975 1210.6993 0.37 0.00023 0/0 0 0 38010984 HCD 30 MS2 7.97532 706.7 38.792 79.0403 24550 24550 24546 QEplus033719.raw F4 668.8 575.1 794.2 714.7 698.6 788.6 288 3.31 1 FALSE 1.14E-05 3.53E-06 1.133 -250 124918 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANIDVSGPK [K].aNIDVSGPk.[V] N-Term(TMT6plex); K9(TMT6plex) 5 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 A0PJF4; Q6UL10; E9Q616; A0JLR7; Q61484 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Desmoyokin (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1 0 3 3 0.446 0 1 1 1 453.60675 1358.8057 1358.80439 0.97 0.00044 0/0 0 0 36258348 HCD 30 MS2 11.63149 502.5 28.367 79.0426 24551 24551 24546 QEplus033719.raw F4 551.5 489 506.7 358.5 601.5 507.7 377 3.61 1 FALSE 1.14E-05 5.00E-06 1.105 -250 124921 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NMSVIAHVDHGK [R].nMSVIAHVDHGk.[S] N-Term(TMT6plex); K12(TMT6plex) 15 Q3UMI7 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 Q3UMI7; Q8C153; P58252; Q3TW58; Q3UDC8; Q3TJZ1; Q3UBL9; Q8BMA8; Q6P9L9; Q3UZ14; Q3TK17; Q3TLB1; Q3TWX1; Q3TX47; O89069 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 OS=Mus musculus OX=10090 GN=Eef2 PE=1 SV=2; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Eef2 protein (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1; Elongation factor 2 (Fragment) OS=Mus musculus OX=10090 GN=Eef2 PE=2 SV=1 0 3 3 0.7166 0 1 1 1 589.32983 1765.97495 1765.97834 -1.92 -0.00113 0/0 0 0 20294354 HCD 30 MS2 31.17653 810 54.513 79.0449 24552 24552 24546 QEplus033719.raw F4 947.4 680.3 924.9 756 863.5 688 433 5.61 1 FALSE 1.14E-05 5.10E-14 2.622 -250 124925 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDNPFPK [R].gDNPFPk.[N] N-Term(TMT6plex); K7(TMT6plex) 4 Q540D7 Alcohol dehydrogenase [NADP(+)] OS=Mus musculus OX=10090 GN=Akr1a1 PE=1 SV=1 Q80XJ7; Q540D7; Q3UJW9; B1AXW3 Alcohol dehydrogenase [NADP(+)] OS=Mus musculus OX=10090 GN=Akr1a1 PE=2 SV=1; Alcohol dehydrogenase [NADP(+)] OS=Mus musculus OX=10090 GN=Akr1a1 PE=1 SV=1; Alcohol dehydrogenase [NADP(+)] OS=Mus musculus OX=10090 GN=Akr1a1 PE=2 SV=1; Aldo-keto reductase family 1 member A1 (Fragment) OS=Mus musculus OX=10090 GN=Akr1a1 PE=1 SV=8 0 2 2 0.5412 0 1 1 1 616.85663 1232.70598 1232.70394 1.65 0.00102 0/0 0 0 19907884 HCD 30 MS2 15.37945 925.9 60.165 79.0471 24553 24553 24546 QEplus033719.raw F4 900 795.9 1003.3 844.6 1038.4 973 345 2.55 1 FALSE 0.0002909 0.005817 0.483 -250 124932 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RLEELEAK [K].rLEELEAk.[R] N-Term(TMT6plex); K8(TMT6plex) 1 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 1 3 3 0.3924 0 1 1 1 482.62936 1445.87354 1445.8728 0.51 0.00025 0/0 0 0 17427416 HCD 30 MS2 56.96037 978.6 56.708 79.0494 24554 24554 24546 QEplus033719.raw F4 992.6 896.4 1088.5 792.7 1129.2 972.3 412 3.67 1 FALSE 4.43E-05 0.001498 0.626 -250 124956 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAADVGK [R].lAADVGk.[GA] N-Term(TMT6plex); K7(TMT6plex) 4 Q8BVI9; P51881 ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a4 PE=2 SV=1;ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3 Q8BVI9; P48962; P51881; B0LAB5 ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a4 PE=2 SV=1; ADP/ATP translocase 1 OS=Mus musculus OX=10090 GN=Slc25a4 PE=1 SV=4; ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase (Fragment) OS=Mus musculus OX=10090 GN=Slc25a5 PE=2 SV=1 0 2 2 0.4195 0 1 1 1 566.36084 1131.7144 1131.71378 0.55 0.00031 0/0 0 0 235846048 HCD 30 MS2 6.116621 984.9 6.262 79.0616 24558 24558 24557 QEplus033719.raw F4 986.1 838.8 1080.3 942.6 914.9 1146.6 426 2.67 2 FALSE 0.0007056 0.01023 0.401 -250 124966 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPASVSPTTPTSPTEGEAS [R].kPASVSPTTPTSPTEGEAS.[-] N-Term(TMT6plex); K1(TMT6plex) 2 Q8R1Q8 Cytoplasmic dynein 1 light intermediate chain 1 OS=Mus musculus OX=10090 GN=Dync1li1 PE=1 SV=1 Q3TVT4; Q8R1Q8 Dynein light intermediate chain (Fragment) OS=Mus musculus OX=10090 GN=Dync1li1 PE=2 SV=1; Cytoplasmic dynein 1 light intermediate chain 1 OS=Mus musculus OX=10090 GN=Dync1li1 PE=1 SV=1 0 3 3 0.7755 0 1 1 1 768.07971 2302.22458 2302.21784 2.93 0.00225 0/0 0 0 6255352 HCD 30 MS2 0 80.1 110 79.0641 24559 24559 24557 QEplus033719.raw F4 81.3 58.1 91.3 67.4 96.3 86 412 5.48 1 FALSE 1.14E-05 2.72E-09 1.725 -250 124988 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RMLAIK [K].rMLAIk.[R] N-Term(TMT6plex); K6(TMT6plex) 2 Q5M9P1 Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1 A0A2I3BPG9; Q5M9P1 "Ribosomal protein L36A, pseudogene 1 OS=Mus musculus OX=10090 GN=Rpl36a-ps1 PE=3 SV=1; Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1" 1 3 3 0.2117 0 1 1 1 397.26691 1189.78617 1189.78551 0.56 0.00022 0/0 0 0 24054262 HCD 30 MS2 22.91465 619.3 45.911 79.0731 24563 24563 24557 QEplus033719.raw F4 587 582.3 737.7 444.9 654.4 709.7 96 2.74 1 FALSE 0.001359 0.01945 0.286 -250 124998 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAADVGK [R].lAADVGk.[GA] N-Term(TMT6plex); K7(TMT6plex) 4 Q8BVI9; P51881 ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a4 PE=2 SV=1;ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3 Q8BVI9; P48962; P51881; B0LAB5 ADP/ATP translocase OS=Mus musculus OX=10090 GN=Slc25a4 PE=2 SV=1; ADP/ATP translocase 1 OS=Mus musculus OX=10090 GN=Slc25a4 PE=1 SV=4; ADP/ATP translocase 2 OS=Mus musculus OX=10090 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase (Fragment) OS=Mus musculus OX=10090 GN=Slc25a5 PE=2 SV=1 0 3 3 0.3186 0 1 1 1 377.90979 1131.71482 1131.71378 0.92 0.00035 0/0 0 0 20700688 HCD 30 MS2 8.415215 727.9 65.012 79.0754 24564 24564 24557 QEplus033719.raw F4 681.6 589.2 777.3 733.6 698.6 887.2 426 2.26 2 FALSE 0.0001504 0.003274 0.549 -250 125007 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FSTVAGESGSADTVRDPR [R].fSTVAGESGSADTVRDPR.[G] N-Term(TMT6plex) 3 Q3TVZ1 Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1 Q91XI2; Q3TVZ1; Q542K4 Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1; Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1; Catalase OS=Mus musculus OX=10090 GN=Cat PE=2 SV=1 1 3 3 0.6458 0 1 1 1 694.35687 2081.05606 2081.04608 4.8 0.00333 0/0 0 0 10328051 HCD 30 MS2 47.56844 745.3 110 79.0779 24565 24565 24557 QEplus033719.raw F4 686.5 650.7 856.9 694.3 780.2 803 295 3.19 1 FALSE 1.14E-05 2.11E-07 1.366 -250 125041 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GFMDGK [K].gFMDGk.[Q] N-Term(TMT6plex); K6(TMT6plex) 19 Q69ZX3; Q5SV64; Q8VDD5 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q6URW6-2; Q69ZX3; Q80T68; A0A2R8VHF9; Q8BLI3; Q8BWI3; A0A338P6K2; O08638-2; O08638; Q5SV64; Q3UH59; Q8VDD5; A0A140LI60; Q6URW6; E9QPE7; Q8BLI1; K3W4R2; Q6URW6-3; Q61879 Isoform 2 of Myosin-14 OS=Mus musculus OX=10090 GN=Myh14; MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myosin-14 (Fragment) OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Myosin-14 OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-14 OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Isoform 3 of Myosin-14 OS=Mus musculus OX=10090 GN=Myh14; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2 0 2 2 0.4076 0 1 1 1 556.81262 1112.61797 1112.61744 0.48 0.00027 0/0 0 0 25307072 HCD 30 MS2 15.09737 1230.1 74.219 79.0922 24570 24570 24568 QEplus033719.raw F4 1241 1043 1351.9 996.2 1477.5 1271.2 128 1.84 3 FALSE 0.007328 0.1176 -0.037 -250 125051 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GSAAWQEHLK [K].gSAAWQEHLk.[Q] N-Term(TMT6plex); K10(TMT6plex) 5 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 Q8BTR1; B9EIU1; Q3UGD4; Q8CGC7; Q9CRF9 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=2; Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; GST_C domain-containing protein OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=3 0 3 3 0.4757 0 1 1 1 528.9682 1584.89005 1584.88985 0.13 0.00007 0/0 0 0 36296116 HCD 30 MS2 7.637119 528.5 41.15 79.0945 24571 24571 24568 QEplus033719.raw F4 558.6 407.8 557.8 511.9 609.2 525.9 404 4.52 1 FALSE 1.14E-05 6.77E-09 1.649 -250 125065 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AFGPGLQGGNAGSPAR [K].aFGPGLQGGNAGSPAR.[F] N-Term(TMT6plex) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.7873 0 1 1 1 562.63623 1685.89414 1685.89208 1.22 0.00069 0/0 0 0 30019650 HCD 30 MS2 7.00248 457.2 43.368 79.099 24573 24573 24568 QEplus033719.raw F4 470.9 395 465.5 358 578.8 474.8 304 5.5 1 FALSE 1.14E-05 9.42E-12 2.192 -250 125071 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SIPADNQIK [K].sIPADNQIk.[A] N-Term(TMT6plex); K9(TMT6plex) 2 Q64669 NAD(P)H dehydrogenase [quinone] 1 OS=Mus musculus OX=10090 GN=Nqo1 PE=1 SV=3 Q99KL8; Q64669 Nqo1 protein OS=Mus musculus OX=10090 GN=Nqo1 PE=2 SV=1; NAD(P)H dehydrogenase [quinone] 1 OS=Mus musculus OX=10090 GN=Nqo1 PE=1 SV=3 0 2 2 0.5755 0 1 1 1 722.43213 1443.85698 1443.85715 -0.12 -0.00008 0/0 0 0 12212519 HCD 30 MS2 7.706632 567 110 79.106 24576 24576 24568 QEplus033719.raw F4 563.9 680.1 657.4 340.5 668.3 491.8 357 3.18 1 FALSE 1.14E-05 2.48E-06 1.163 -250 125085 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EVENEQTPVSEPEEEK [K].eVENEQTPVSEPEEEk.[G] N-Term(TMT6plex); K16(TMT6plex) 16 O70318 Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2 Q811B2; B6ZHC6; O70318; B6ZHD0; Q80UE5; Q8CGJ6; Q80UE3; A0A1W2P7H7; A0A1W2P7I4; Q80UE4; A0A1W2P6I5; B6ZHC5; B6ZHC7; Q8C928; A0A1W2P896; Q3UNQ6 Epb4.1l2 protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=2; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Epb4.1l2 protein (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Protein 4.1G OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Erythrocyte protein band 4.1-like 2 OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; Band 4.1-like protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Epb41l2 PE=1 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Epb41l2 PE=2 SV=1 0 3 3 0.7904 0 1 1 1 777.72522 2331.16111 2331.16039 0.31 0.00024 0/0 0 0 3242934.25 HCD 30 MS2 0 138.8 110 79.111 24578 24578 24568 QEplus033719.raw F4 126.4 127.6 157.2 114.3 153.2 154.1 223 6.49 1 FALSE 1.14E-05 1.59E-11 2.149 -250 125088 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERHDELSYF [K].eRHDELSYF.[-] N-Term(TMT6plex) 1 Q62426 Cystatin-B OS=Mus musculus OX=10090 GN=Cstb PE=1 SV=1 Q62426 Cystatin-B OS=Mus musculus OX=10090 GN=Cstb PE=1 SV=1 1 2 2 0.7068 0 1 1 1 712.85541 1424.70354 1424.70076 1.95 0.00139 0/0 0 0 5595053 HCD 30 MS2 16.42941 243.1 110 79.1184 24580 24580 24579 QEplus033719.raw F4 242.1 225.7 269.2 235.4 239.3 246.7 119 2.49 1 FALSE 0.0006294 0.009376 0.415 -250 125092 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LEPNAQAQMYR [R].lEPNAQAQMYR.[L] N-Term(TMT6plex) 2 P17426 AP-2 complex subunit alpha-1 OS=Mus musculus OX=10090 GN=Ap2a1 PE=1 SV=1 P17426-2; P17426 Isoform B of AP-2 complex subunit alpha-1 OS=Mus musculus OX=10090 GN=Ap2a1; AP-2 complex subunit alpha-1 OS=Mus musculus OX=10090 GN=Ap2a1 PE=1 SV=1 0 2 2 0.6761 0 1 1 1 775.40509 1549.8029 1549.79943 2.24 0.00174 0/0 0 0 3756576.75 HCD 30 MS2 0 265.3 110 79.1209 24581 24581 24579 QEplus033719.raw F4 261.1 189.8 264.1 271.6 263 342.3 245 3.55 1 FALSE 1.14E-05 1.17E-08 1.604 -250 125118 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KADIDLTKR [R].kADIDLTkR.[A] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 5 Q561N5 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1 S4R1N6; Q561N5; Q3TW65; F6YVP7; A0A1Y7VKY1 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=3 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18 PE=2 SV=1; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps6 PE=3 SV=2; 40S ribosomal protein S18 OS=Mus musculus OX=10090 GN=Rps18-ps5 PE=3 SV=1 2 4 4 0.5868 0 1 1 1 437.53198 1747.1061 1747.10448 0.93 0.0004 0/0 0 0 29034986 HCD 30 MS2 26.64975 926.3 43.285 79.1277 24584 24584 24579 QEplus033719.raw F4 855.4 1063.7 1123.5 711.5 942.8 860.7 222 3.17 1 FALSE 0.0001603 0.003606 0.539 -250 125132 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EEMIHNLQ [K].eEMIHNLQ.[-] N-Term(TMT6plex) 3 Q9D8W5 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=4 Q3U8F5; Q9D8W5; B1AT36 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd12 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=4; 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus OX=10090 GN=Psmd12 PE=1 SV=1 0 2 2 0.8109 0 1 1 1 621.82135 1242.63542 1242.63499 0.35 0.00022 0/0 0 0 19863654 HCD 30 MS2 4.01584 534.6 105.901 79.1324 24586 24586 24579 QEplus033719.raw F4 537.7 475.4 573.1 437.4 596.6 587.6 126 2.38 1 FALSE 0.001074 0.01375 0.349 -250 125141 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ECMDMLR [K].ecMDMLR.[L] N-Term(TMT6plex); C2(Carbamidomethyl) 2 D3Z7P3 "Glutaminase kidney isoform, mitochondrial OS=Mus musculus OX=10090 GN=Gls PE=1 SV=1" D3Z7P3-2; D3Z7P3 "Isoform 2 of Glutaminase kidney isoform, mitochondrial OS=Mus musculus OX=10090 GN=Gls; Glutaminase kidney isoform, mitochondrial OS=Mus musculus OX=10090 GN=Gls PE=1 SV=1" 0 2 2 0.6296 0 1 1 1 592.27753 1183.54778 1183.5471 0.57 0.00034 0/0 0 0 13965798 HCD 30 MS2 37.39819 1266.1 110 79.1349 24587 24587 24579 QEplus033719.raw F4 1365.8 973.2 1325.7 1281.9 1201.4 1448.3 31 2.7 1 FALSE 0.0009447 0.01283 0.361 -250 125157 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQVMEVK [R].aQVMEVk.[A] N-Term(TMT6plex); K7(TMT6plex) 1 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 0 2 2 0.2194 0 1 1 1 631.88348 1262.75969 1262.75426 4.3 0.00271 0/0 0 0 4174179 HCD 30 MS2 18.61643 1197.2 110 79.1399 24589 24589 24579 QEplus033719.raw F4 1199.1 1087 1355.6 971.8 1331.8 1238.2 490 2.78 1 FALSE 0.0003408 0.006536 0.467 -250 125174 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERIEAQNQPFDAK [K].eRIEAQNQPFDAk.[T] N-Term(TMT6plex); K13(TMT6plex) 2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 Q1WNQ4; P13541 Embryonic myosin heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 3 3 0.6273 0 1 1 1 668.70233 2004.09244 2004.09146 0.49 0.00033 0/0 0 0 37729656 HCD 30 MS2 22.0791 980 63.114 79.1518 24593 24593 24590 QEplus033719.raw F4 1216.7 334.3 810.2 1643.3 390.5 1485.1 455 4.83 1 FALSE 1.14E-05 6.49E-11 2.033 -250 125191 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AMDVYQK [K].aMDVYQk.[A] N-Term(TMT6plex); K7(TMT6plex) 2 Q60864 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1 Q60864; Q3THQ5 Stress-induced-phosphoprotein 1 OS=Mus musculus OX=10090 GN=Stip1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Stip1 PE=2 SV=1 0 2 2 0.5524 0 1 1 1 656.87073 1312.73418 1312.73353 0.49 0.00032 0/0 0 0 18901490 HCD 30 MS2 38.00766 1368.8 110 79.1588 24596 24596 24590 QEplus033719.raw F4 1532.1 1043.1 1432 1344.9 1291.2 1569.7 309 2.86 1 FALSE 0.0002518 0.005192 0.497 -250 125199 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GFEDEVK [K].gFEDEVk.[K] N-Term(TMT6plex); K7(TMT6plex) 3 A0A087WQS2 Basic leucine zipper and W2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1 A0A087WQS2; Q9CQC6; A0A087WPF9 Basic leucine zipper and W2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1; Basic leucine zipper and W2 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1; Basic leucine zipper and W2 domain-containing protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Bzw1 PE=1 SV=1 0 2 2 0.5284 0 1 1 1 641.35797 1281.70867 1281.70909 -0.33 -0.00021 0/0 0 0 9163132 HCD 30 MS2 8.016771 865.3 110 79.1613 24597 24597 24590 QEplus033719.raw F4 849.6 739.1 910.9 591.6 1150.9 949.9 343 2.29 1 FALSE 0.000565 0.008687 0.427 -250 125224 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HDLDLICR [KR].hDLDLIcR.[A] N-Term(TMT6plex); C7(Carbamidomethyl) 10 P63087; P62137; P62141 Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1ca PE=1 SV=1;Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cb PE=1 SV=3 Q3U8W0; P63087; P63087-2; P62137; Q3TYF5; P62141; Q3U7K1; A0A0J9YUU8; A0A0G2JGC1; A0A0G2JFF1 Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1ca PE=2 SV=1; Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1; Isoform 2 of Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cc; Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1ca PE=1 SV=1; Serine/threonine-protein phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Ppp1ca PE=2 SV=1; Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cb PE=1 SV=3; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp1cc PE=2 SV=1; Serine/threonine-protein phosphatase PP1-beta catalytic subunit (Fragment) OS=Mus musculus OX=10090 GN=Ppp1cb PE=1 SV=1; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1; Serine/threonine-protein phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1 0 2 2 0.7148 0 1 1 1 635.8429 1270.67851 1270.67752 0.78 0.0005 0/0 0 0 14821041 HCD 30 MS2 16.59347 769.8 110 79.1688 24600 24600 24590 QEplus033719.raw F4 778.5 665.8 865.2 595.6 881.2 832.8 203 2.91 3 FALSE 2.26E-05 0.000985 0.663 -250 125232 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELEQSIK [R].eLEQSIk.[A] N-Term(TMT6plex); K7(TMT6plex) 3 Q9WVE8 Protein kinase C and casein kinase substrate in neurons protein 2 OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1 A0A2R8W6S4; A0A338P6P7; Q9WVE8 Protein kinase C and casein kinase substrate in neurons protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1; Protein kinase C and casein kinase substrate in neurons protein 2 (Fragment) OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1; Protein kinase C and casein kinase substrate in neurons protein 2 OS=Mus musculus OX=10090 GN=Pacsin2 PE=1 SV=1 0 2 2 0.097 0 1 1 2 652.89484 1304.7824 1304.78259 -0.15 -0.0001 0/0 0 0 26716228 HCD 30 MS2 9.308886 976 57.499 79.1784 24603 24603 24601 QEplus033719.raw F4 934.6 869 1131.2 865.2 964.2 1091.7 522 2.68 1 FALSE 0.0006294 0.009396 0.414 -250 125239 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MTLETK [R].mTLETk.[Q] N-Term(TMT6plex); K6(TMT6plex) 12 Q8CAQ8 MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 Q8CAQ8-5; A6H604; Q3U7N2; Q6P8Y5; Q8CAQ8; Q8CAQ8-2; Q3TVZ5; Q2YDW0; E9Q800; Q8CAQ8-3; Q3TEY5; A0A0U1RQ14 Isoform 5 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 2 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1; Isoform 3 of MICOS complex subunit Mic60 OS=Mus musculus OX=10090 GN=Immt; MICOS complex subunit MIC60 OS=Mus musculus OX=10090 GN=Immt PE=2 SV=1; MICOS complex subunit MIC60 (Fragment) OS=Mus musculus OX=10090 GN=Immt PE=1 SV=1 0 2 2 0.0773 0 1 1 1 590.85406 1180.70085 1180.70117 -0.27 -0.00016 0/0 0 0 23791318 HCD 30 MS2 36.9399 1127.4 45.419 79.1807 24604 24604 24601 QEplus033719.raw F4 1102.9 889.6 1234.6 1215.6 1002.5 1319.1 275 2.33 1 FALSE 0.007405 0.1198 -0.041 -250 125261 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CIAMCMDR [K].cIAMcMDR.[Y] N-Term(TMT6plex); C1(Carbamidomethyl); C5(Carbamidomethyl) 2 P62075 Mitochondrial import inner membrane translocase subunit Tim13 OS=Mus musculus OX=10090 GN=Timm13 PE=1 SV=1 P62075; A0A1W2P7H2 Mitochondrial import inner membrane translocase subunit Tim13 OS=Mus musculus OX=10090 GN=Timm13 PE=1 SV=1; Mitochondrial import inner membrane translocase subunit OS=Mus musculus OX=10090 GN=Timm13 PE=1 SV=1 0 2 2 0.5296 0 1 1 1 643.28967 1285.57207 1285.57227 -0.16 -0.0001 0/0 0 0 12419941 HCD 30 MS2 16.13698 874.3 110 79.1882 24607 24607 24601 QEplus033719.raw F4 1072.2 699.5 914.7 863.5 850.4 845.6 16 3.04 1 FALSE 2.26E-05 0.001049 0.658 -250 125268 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EELMEK [K].eELMEk.[L] N-Term(TMT6plex); K6(TMT6plex) 3 P26041 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3 P26041; Q05DU4; Q3TZQ2 Moesin OS=Mus musculus OX=10090 GN=Msn PE=1 SV=3; Msn protein (Fragment) OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1; FERM domain-containing protein OS=Mus musculus OX=10090 GN=Msn PE=2 SV=1 0 2 2 0.1355 0 1 1 1 618.84668 1236.68608 1236.691 -3.97 -0.00246 0/0 0 0 5909317 HCD 30 MS2 44.48147 1470.1 110 79.1907 24608 24608 24601 QEplus033719.raw F4 1689.8 969.8 1400 1507 1500.7 1753.1 370 2.73 1 FALSE 0.005986 0.09906 0.009 -250 125274 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQAENDASKEEVK [R].lQAENDASkEEVk.[E] N-Term(TMT6plex); K9(TMT6plex); K13(TMT6plex) 2 Q61768 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3 Q61768; E9QAK5 Kinesin-1 heavy chain OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=3; Kinesin-like protein (Fragment) OS=Mus musculus OX=10090 GN=Kif5b PE=1 SV=1 1 3 3 0.6696 0 1 1 1 716.74139 2148.20963 2148.21152 -0.88 -0.00063 0/0 0 0 15596686 HCD 30 MS2 15.91851 800.4 110 79.1932 24609 24609 24601 QEplus033719.raw F4 866.4 602.5 898.2 851.5 625 959 440 3.45 1 FALSE 1.14E-05 1.05E-11 2.183 -250 125281 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLAPEYEK [K].kLAPEYEk.[A] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 2 A0A0R4J0Z1 Protein disulfide-isomerase A4 OS=Mus musculus OX=10090 GN=Pdia4 PE=1 SV=1 A0A0R4J0Z1; P08003 Protein disulfide-isomerase A4 OS=Mus musculus OX=10090 GN=Pdia4 PE=1 SV=1; Protein disulfide-isomerase A4 OS=Mus musculus OX=10090 GN=Pdia4 PE=1 SV=3 1 3 3 0.3442 0 1 1 1 555.67804 1665.01957 1665.01902 0.33 0.00018 0/0 0 0 11966116 HCD 30 MS2 25.4207 1180.5 110 79.1957 24610 24610 24601 QEplus033719.raw F4 1354.6 1117.8 1263.8 971.7 1284 1090.8 310 3.69 1 FALSE 1.14E-05 6.21E-05 0.897 -250 125307 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELQQAGLK [R].eLQQAGLk.[T] N-Term(TMT6plex); K8(TMT6plex) 4 E9Q7G0 Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 Q91W16; E9Q7G0; Q3UNM2; F6ZQA3 Numa1 protein OS=Mus musculus OX=10090 GN=Numa1 PE=2 SV=1; Nuclear mitotic apparatus protein 1 OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=2 SV=1; Nuclear mitotic apparatus protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Numa1 PE=1 SV=1 0 2 2 0.4744 0 1 1 1 672.91614 1344.825 1344.82512 -0.09 -0.00006 0/0 0 0 7566210 HCD 30 MS2 0 1102.3 110 79.2078 24614 24614 24612 QEplus033719.raw F4 998.1 1225.3 1217.7 740 1458.9 973.7 468 3.12 1 FALSE 1.14E-05 0.0008977 0.672 -250 125319 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VRELVDK [K].vRELVDk.[A] N-Term(TMT6plex); K7(TMT6plex) 4 Q5SUH7 Clathrin interactor 1 OS=Mus musculus OX=10090 GN=Clint1 PE=1 SV=1 Q5SUH7; Q3UGL3; Q5SUH6; Q3UPG6 Clathrin interactor 1 OS=Mus musculus OX=10090 GN=Clint1 PE=1 SV=1; ENTH domain-containing protein OS=Mus musculus OX=10090 GN=Clint1 PE=2 SV=1; Clathrin interactor 1 OS=Mus musculus OX=10090 GN=Clint1 PE=1 SV=1; ENTH domain-containing protein OS=Mus musculus OX=10090 GN=Clint1 PE=2 SV=1 1 3 3 0.314 0 1 1 1 439.61514 1316.83088 1316.83021 0.51 0.00022 0/0 0 0 13015900 HCD 30 MS2 29.49903 788.7 102.812 79.2124 24616 24616 24612 QEplus033719.raw F4 801.2 647.8 858.1 652 932 841.3 432 2.58 1 FALSE 0.001038 0.01361 0.351 -250 125327 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIHLNLDR [K].nIHLNLDR.[R] N-Term(TMT6plex) 5 A0A0G2JFX7; Q9CWZ3-2 RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a PE=1 SV=1;Isoform 2 of RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a A0A0G2JFX7; Q9CWZ3; A0A0G2JEA9; Q9CWZ3-2; A0A0N4SUH6 RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a PE=1 SV=1; RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a PE=1 SV=4; RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a PE=1 SV=1; Isoform 2 of RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a; RNA-binding protein 8A OS=Mus musculus OX=10090 GN=Rbm8a2 PE=3 SV=1 0 3 3 0.3691 0 1 1 1 408.57303 1223.70453 1223.70579 -1.02 -0.00042 0/0 0 0 6139687.5 HCD 30 MS2 31.43705 407.7 110 79.2149 24617 24617 24612 QEplus033719.raw F4 368.9 355.5 469.5 333 408.1 511.1 377 3.17 2 FALSE 5.44E-05 0.001777 0.61 -250 125335 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AQVMEVK [R].aQVMEVk.[A] N-Term(TMT6plex); K7(TMT6plex) 1 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 0 2 2 0.2662 0 1 1 1 631.88025 1262.75322 1262.75426 -0.83 -0.00052 0/0 0 0 13921569 HCD 30 MS2 31.37169 1251.9 110 79.2174 24618 24618 24612 QEplus033719.raw F4 1249.3 1141.1 1370.6 1035.7 1380.4 1334.5 487 2.93 1 FALSE 0.0002218 0.004712 0.508 -250 125353 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DTGKTPVEPEVAIHR [K].dTGkTPVEPEVAIHR.[I] N-Term(TMT6plex); K4(TMT6plex) 1 Q5BLK2 40S ribosomal protein S20 OS=Mus musculus OX=10090 GN=Rps20 PE=1 SV=1 Q5BLK2 40S ribosomal protein S20 OS=Mus musculus OX=10090 GN=Rps20 PE=1 SV=1 1 4 4 0.6594 0 1 1 1 527.55341 2107.19179 2107.19117 0.29 0.00015 0/0 0 0 9578441 HCD 30 MS2 9.04487 502.9 110 79.2222 24620 24620 24612 QEplus033719.raw F4 509.8 461.7 545.4 418.4 520.3 561.9 484 6.87 1 FALSE 1.14E-05 9.01E-12 2.195 -250 125356 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NKHEAMITDLEER [K].nkHEAMITDLEER.[L] N-Term(TMT6plex); K2(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 1 4 4 0.735 0 1 1 1 511.77786 2044.08962 2044.08974 -0.06 -0.00003 0/0 0 0 8205203 HCD 30 MS2 32.78113 622.8 110 79.2247 24621 24621 24612 QEplus033719.raw F4 614.5 514.4 685.2 529.2 655 738.5 332 4.34 1 FALSE 1.14E-05 3.00E-07 1.337 -250 125365 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FISETLRR [K].fISETLRR.[M] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.4338 0 1 1 1 625.87494 1250.7426 1250.74184 0.61 0.00038 0/0 0 0 7093930.5 HCD 30 MS2 13.57675 569.5 110 79.2272 24622 24622 24612 QEplus033719.raw F4 546.7 463.6 652.9 495.2 576.4 682.2 338 3.02 2 FALSE 1.14E-05 0.000771 0.685 -250 125380 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YQEGVFVR [R].yQEGVFVR.[Q] N-Term(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1; Q8BUJ0 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1 0 2 2 0.5217 0 1 1 1 613.84009 1226.6729 1226.67309 -0.15 -0.00009 0/0 0 0 11917207 HCD 30 MS2 5.569953 914.4 110 79.237 24625 24625 24623 QEplus033719.raw F4 981.9 503.6 911 1302.7 594.1 1193.1 249 2.53 2 FALSE 0.0008718 0.01191 0.375 -250 125394 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MATNAAAQNAIK [R].mATNAAAQNAIk.[K] N-Term(TMT6plex); K12(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.7356 0 1 1 1 831.47394 1661.9406 1661.9409 -0.18 -0.00015 0/0 0 0 7981109.5 HCD 30 MS2 0 392.6 110 79.2441 24628 24628 24623 QEplus033719.raw F4 398.7 359.4 441 287.4 494.7 374.5 515 5.37 1 FALSE 1.14E-05 2.72E-12 2.294 -250 125400 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YYMNQVEETR [R].yYMNQVEETR.[Y] N-Term(TMT6plex) 2 A0A0R4IZY0 Thimet oligopeptidase OS=Mus musculus OX=10090 GN=Thop1 PE=1 SV=1 A0A0R4IZY0; Q8C1A5 Thimet oligopeptidase OS=Mus musculus OX=10090 GN=Thop1 PE=1 SV=1; Thimet oligopeptidase OS=Mus musculus OX=10090 GN=Thop1 PE=1 SV=1 0 2 2 0.573 0 1 1 1 781.37854 1561.7498 1561.75181 -1.28 -0.001 0/0 0 0 4963960 HCD 30 MS2 11.99908 470.5 110 79.2466 24629 24629 24623 QEplus033719.raw F4 491.1 364.4 547.4 449.8 446.8 523.3 80 3.56 1 FALSE 1.14E-05 2.35E-05 0.977 -250 125406 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDTAAALEDDNEGDKK [K].gDTAAALEDDNEGDkk.[K] N-Term(TMT6plex); K15(TMT6plex); K16(TMT6plex) 1 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 Q05D44 Eukaryotic translation initiation factor 5B OS=Mus musculus OX=10090 GN=Eif5b PE=1 SV=2 1 3 3 0.789 0 1 1 1 779.41235 2336.22251 2336.21846 1.73 0.00135 0/0 0 0 2885906.25 HCD 30 MS2 0 400.2 110 79.2491 24630 24630 24623 QEplus033719.raw F4 400.7 324.4 462.9 304.3 477.5 431.3 415 6.35 1 FALSE 1.14E-05 6.31E-16 3.38 -250 125412 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QTNFMTK [K].qTNFMTk.[L] N-Term(TMT6plex); K7(TMT6plex) 2 Q91WQ3 "Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3" Q91WQ3; A2A7S7 "Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3; Tyrosine--tRNA ligase OS=Mus musculus OX=10090 GN=Yars PE=1 SV=1" 0 2 2 0.5819 0 1 1 1 664.37531 1327.74333 1327.74443 -0.82 -0.00055 0/0 0 0 11968851 HCD 30 MS2 28.13199 973.2 110 79.2516 24631 24631 24623 QEplus033719.raw F4 1026.6 788.4 1074.6 816.2 1036.5 1097.2 306 2.87 1 FALSE 0.000262 0.005316 0.494 -250 125416 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERIEAQNQPFDAK [K].eRIEAQNQPFDAk.[T] N-Term(TMT6plex); K13(TMT6plex) 2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 Q1WNQ4; P13541 Embryonic myosin heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 2 2 0.6927 0 1 1 1 1002.55139 2004.09551 2004.09146 2.02 0.00202 0/0 0 0 4563742.5 HCD 30 MS2 0 243.9 110 79.2542 24632 24632 24623 QEplus033719.raw F4 328.2 33 179.9 484 27.9 410.1 454 3.97 1 FALSE 1.14E-05 4.89E-12 2.246 -250 125424 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KGDEYVINGQK [K].kGDEYVINGQk.[M] N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex) 3 P45952 "Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadm PE=1 SV=1" P45952; Q91WS8; Q3V2I9 "Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadm PE=1 SV=1; Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Acadm PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Acadm PE=2 SV=1" 1 3 3 0.6867 0 1 1 1 646.71277 1938.12375 1938.12634 -1.33 -0.00086 0/0 0 0 4401888.5 HCD 30 MS2 17.10759 568.5 110 79.2567 24633 24633 24623 QEplus033719.raw F4 561.6 511.4 602.7 502.9 614.5 617.8 455 4.98 1 FALSE 1.14E-05 1.02E-10 1.995 -250 125431 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GGSLGENQIKDEK [K].gGSLGENQIkDEk.[I] N-Term(TMT6plex); K10(TMT6plex); K13(TMT6plex) 7 Q8VCQ8 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1 Q8VCQ8; Q3UGC3; E9Q0M9; S4R1T7; E9Q9F3; E9QA16; Q3TUS1 Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Caldesmon 1 OS=Mus musculus OX=10090 GN=Cald1 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cald1 PE=2 SV=1 1 2 2 0.6772 0 1 1 1 1031.59314 2062.179 2062.17474 2.06 0.00213 0/0 0 0 1797102.75 HCD 30 MS2 0 161.9 110 79.264 24635 24635 24634 QEplus033719.raw F4 157.2 170.5 174.3 96.8 238.3 134.4 446 3.16 1 FALSE 1.14E-05 5.40E-12 2.238 -250 125436 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSSLPGYGK [K].tSSLPGYGk.[N] N-Term(TMT6plex); K9(TMT6plex) 17 E9Q9C7 Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1 E9Q030; E9Q9C7; E9QK41; E9Q9D2; Q8K4G5-3; Q8K4G5-2; E9Q9D1; Q8K4G5; B9EIV0; E9Q9C4; E9Q9C1; E9Q9C0; Q8K4G5-4; Q3UP03; E9Q9Q7; Q8K278; E9Q9C2 Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Isoform 3 of Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1; Isoform 2 of Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Ablim1 protein OS=Mus musculus OX=10090 GN=Ablim1 PE=2 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Isoform 4 of Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ablim1 PE=2 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1; Ablim1 protein OS=Mus musculus OX=10090 GN=Ablim1 PE=2 SV=1; Actin-binding LIM protein 1 OS=Mus musculus OX=10090 GN=Ablim1 PE=1 SV=1 0 2 2 0.6237 0 1 1 1 684.40021 1367.79314 1367.79349 -0.25 -0.00017 0/0 0 0 2845846 HCD 30 MS2 68.47432 630.8 110 79.2665 24636 24636 24634 QEplus033719.raw F4 603.1 505.3 733.1 508.4 676.9 758.3 357 2.87 1 FALSE 2.26E-05 0.001105 0.653 -250 125462 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEAMTNSK [R].kLEAMTNSk.[Q] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 1 3 3 0.6529 0 1 1 1 570.34631 1709.02439 1709.02345 0.55 0.00031 0/0 0 0 16267054 HCD 30 MS2 5.212223 1266.8 100.075 79.2734 24639 24639 24634 QEplus033719.raw F4 1373.2 1122.7 1355.6 987 1401.4 1361 346 4.61 1 FALSE 1.14E-05 4.71E-09 1.679 -250 125478 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNSLSPADK [K].vNSLSPADk.[Q] N-Term(TMT6plex); K9(TMT6plex) 3 Q8K411 "Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1 PE=1 SV=1" Q8K411-2; Q8K411-3; Q8K411 "Isoform 2 of Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1; Isoform 3 of Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1; Presequence protease, mitochondrial OS=Mus musculus OX=10090 GN=Pitrm1 PE=1 SV=1" 0 2 2 0.5714 0 1 1 1 694.91125 1388.81523 1388.81495 0.2 0.00014 0/0 0 0 11311303 HCD 30 MS2 55.21741 717 110 79.2782 24641 24641 24634 QEplus033719.raw F4 766 637.7 761.8 615 786.7 735.1 485 3.08 1 FALSE 1.14E-05 2.32E-05 0.978 -250 125487 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VLYYTGR [R].vLYYTGR.[I] N-Term(TMT6plex) 1 Q8K0D5 "Elongation factor G, mitochondrial OS=Mus musculus OX=10090 GN=Gfm1 PE=1 SV=1" Q8K0D5 "Elongation factor G, mitochondrial OS=Mus musculus OX=10090 GN=Gfm1 PE=1 SV=1" 0 2 2 0.5146 0 1 1 1 550.81995 1100.63262 1100.63016 2.23 0.00123 0/0 0 0 6062542 HCD 30 MS2 47.09446 862 110 79.2807 24642 24642 24634 QEplus033719.raw F4 946.8 680.1 930.7 727.5 924.5 962.4 277 2.39 1 FALSE 0.0001504 0.003331 0.547 -250 125502 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FLYDDNQR [RK].fLYDDNQR.[V] N-Term(TMT6plex) 3 Q01320; Q64511 DNA topoisomerase 2-alpha OS=Mus musculus OX=10090 GN=Top2a PE=1 SV=2;DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2 Q01320; Q8CCE5; Q64511 DNA topoisomerase 2-alpha OS=Mus musculus OX=10090 GN=Top2a PE=1 SV=2; Toprim domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Top2a PE=2 SV=1; DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2 0 2 2 0.6552 0 1 1 1 650.32794 1299.64861 1299.65308 -3.44 -0.00224 0/0 0 0 4224974 HCD 30 MS2 0 566.5 110 79.2857 24644 24644 24634 QEplus033719.raw F4 554.9 482.3 596.4 415.6 697.2 652.4 86 2.9 2 FALSE 0.0001707 0.003912 0.53 -250 125511 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYIPPKGETK [K].tYIPPkGETk.[K] N-Term(TMT6plex); K6(TMT6plex); K10(TMT6plex) 12 Q8BNM0 High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 Q8BQ02; Q8BNM0; Q6P202; Q58EV5; Q3UJK0; Q8C7C4; D3YZ18; D3YVC6; Q3UBK2; A0A0J9YUZ4; A0A0J9YUD8; Q497Z6 High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=8; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein B1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 1 3 3 0.5204 0 1 1 1 607.70801 1821.10947 1821.1089 0.31 0.00019 0/0 0 0 27152814 HCD 30 MS2 0 897 47.309 79.293 24646 24646 24645 QEplus033719.raw F4 839.6 1064.1 986.6 595.9 1171.4 724.3 313 2.94 1 FALSE 1.14E-05 3.91E-05 0.935 -250 125518 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LPGQPPASMGR [K].lPGQPPASMGR.[G] N-Term(TMT6plex) 8 Q3UPA3 Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1 Q3UUX9; Q3UPA3; Q3TIY6; Q9CZ18; Q61598-2; Q3UC72; A0A1Y7VL99; Q61598 Rab GDP dissociation inhibitor OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Rab GDP dissociation inhibitor OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Rab GDP dissociation inhibitor OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Isoform 2 of Rab GDP dissociation inhibitor beta OS=Mus musculus OX=10090 GN=Gdi2; Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=2 SV=1; Rab GDP dissociation inhibitor (Fragment) OS=Mus musculus OX=10090 GN=Gdi2 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Mus musculus OX=10090 GN=Gdi2 PE=1 SV=1 0 2 2 0.5099 0 1 1 1 670.37177 1339.73625 1339.73537 0.66 0.00044 0/0 0 0 38324724 HCD 30 MS2 22.22151 702.4 51.029 79.2953 24647 24647 24645 QEplus033719.raw F4 766.6 310.7 608.3 1005.2 479.3 1044.4 295 2.02 1 FALSE 5.44E-05 0.002314 0.584 -250 125526 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ERIEAQNQPFDAK [K].eRIEAQNQPFDAk.[T] N-Term(TMT6plex); K13(TMT6plex) 2 P13541 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 Q1WNQ4; P13541 Embryonic myosin heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2 1 4 4 0.6076 0 1 1 1 501.77859 2004.09255 2004.09146 0.54 0.00027 0/0 0 0 35171920 HCD 30 MS2 25.81141 521.3 28.373 79.2975 24648 24648 24645 QEplus033719.raw F4 673.9 137.1 449.5 884.8 166.6 815.8 464 4.23 1 FALSE 1.14E-05 1.76E-09 1.76 -250 125536 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IPEPTPTVDSHEPR [K].iPEPTPTVDSHEPR.[L] N-Term(TMT6plex) 3 Q3TJZ7 Uncharacterized protein OS=Mus musculus OX=10090 GN=Jpt2 PE=2 SV=1 Q3TJZ7; Q6PGH2; Q3U7P4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Jpt2 PE=2 SV=1; Jupiter microtubule associated homolog 2 OS=Mus musculus OX=10090 GN=Jpt2 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Jpt2 PE=2 SV=1 0 3 3 0.7432 0 1 1 1 601.98633 1803.94443 1803.94384 0.33 0.0002 0/0 0 0 11029116 HCD 30 MS2 44.27404 686.4 110 79.3 24649 24649 24645 QEplus033719.raw F4 651.1 576.4 761.2 562.9 809.6 757.4 317 4.4 1 FALSE 1.14E-05 4.19E-11 2.069 -250 125551 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FISETLRR [K].fISETLRR.[M] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 2 2 0.5037 0 1 1 1 625.87543 1250.74358 1250.74184 1.39 0.00087 0/0 0 0 5069371 HCD 30 MS2 0 732.2 110 79.3051 24651 24651 24645 QEplus033719.raw F4 773.3 647.1 796.2 613.3 754.5 808.7 308 2.7 2 FALSE 0.001541 0.02319 0.256 -250 125559 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NGSLICTASK [R].nGSLIcTASk.[D] N-Term(TMT6plex); C6(Carbamidomethyl); K10(TMT6plex) 4 Q3TF74 Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1 Q3TF74; Q5PPQ7; Q3TEU8; Q9WUM4 Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin OS=Mus musculus OX=10090 GN=Coro1c PE=2 SV=1; Coronin-1C OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=2 0 2 2 0.5975 0 1 1 1 754.92725 1508.84722 1508.85068 -2.3 -0.00173 0/0 0 0 4109606 HCD 30 MS2 19.72328 478 110 79.3076 24652 24652 24645 QEplus033719.raw F4 463.1 536.6 535.5 325.9 528.5 478.7 396 3.23 1 FALSE 1.14E-05 5.10E-07 1.293 -250 125566 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLGIGK [K].nLGIGk.[I] N-Term(TMT6plex); K6(TMT6plex) 1 P08249 "Malate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Mdh2 PE=1 SV=3" P08249 "Malate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Mdh2 PE=1 SV=3" 0 3 3 0.065 0 1 1 1 353.9024 1059.69266 1059.69265 0.01 0 0/0 0 0 3354838 HCD 30 MS2 22.76243 339.9 110 79.3101 24653 24653 24645 QEplus033719.raw F4 476 206.2 289.6 370.2 364.9 332.7 50 2.46 1 FALSE 0.001185 0.01616 0.319 -250 125576 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RQAVTNPNNTFYATK [K].rQAVTNPNNTFYATk.[R] N-Term(TMT6plex); K15(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 1 3 3 0.8102 0 1 1 1 728.40442 2183.1987 2183.19732 0.63 0.00046 0/0 0 0 17121132 HCD 30 MS2 7.750683 368.3 110 79.3126 24654 24654 24645 QEplus033719.raw F4 369.7 280.1 425.2 395.6 304.7 434.5 442 7.43 1 FALSE 1.14E-05 6.31E-16 3.455 -250 125581 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QCALISK [K].qcALISk.[S] N-Term(TMT6plex); C2(Carbamidomethyl); K7(TMT6plex) 3 Q6NZB3 Ribonucleoside-diphosphate reductase OS=Mus musculus OX=10090 GN=Rrm1 PE=2 SV=1 Q6NZB3; P07742; Q05DU8 Ribonucleoside-diphosphate reductase OS=Mus musculus OX=10090 GN=Rrm1 PE=2 SV=1; Ribonucleoside-diphosphate reductase large subunit OS=Mus musculus OX=10090 GN=Rrm1 PE=1 SV=2; Ribonucleoside-diphosphate reductase (Fragment) OS=Mus musculus OX=10090 GN=Rrm1 PE=2 SV=1 0 2 2 0.4219 0 1 1 1 639.38611 1277.76494 1277.76516 -0.18 -0.00011 0/0 0 0 7470631 HCD 30 MS2 15.71541 941.6 110 79.3151 24655 24655 24645 QEplus033719.raw F4 960.2 639.4 837.9 753.5 1440.2 1018.6 460 2.56 1 FALSE 0.0009633 0.01307 0.358 -250 125599 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous REQEVSILK [K].rEQEVSILk.[K] N-Term(TMT6plex); K9(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 1 3 3 0.1583 0 1 1 1 520.65582 1559.95292 1559.95211 0.51 0.00027 0/0 0 0 71326456 HCD 30 MS2 36.37902 1086.7 25.556 79.3272 24659 24659 24656 QEplus033719.raw F4 1178.7 716.2 1246.6 873.9 1118 1386.8 347 4.17 1 FALSE 1.14E-05 6.07E-07 1.279 -250 125606 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YHPGYFGK [K].yHPGYFGk.[V] N-Term(TMT6plex); K8(TMT6plex) 1 P14115 60S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5 P14115 60S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5 0 3 3 0.5461 0 1 1 1 476.26779 1426.78882 1426.78834 0.34 0.00016 0/0 0 0 54673456 HCD 30 MS2 32.68686 808.7 27.043 79.3295 24660 24660 24656 QEplus033719.raw F4 666.7 752.7 964.8 712.5 871.2 884.1 319 2.93 1 FALSE 0.0002218 0.004633 0.51 -250 125614 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTFEINPR [K].kTFEINPR.[H] N-Term(TMT6plex); K1(TMT6plex) 7 Q3UBU0 HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1 Q3TUD6; Q3UBU0; Q91V38; Q9CW12; Q8CCY5; F7C312; P08113 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; HATPase_c domain-containing protein OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Heat shock protein 90, beta (Grp94), member 1 OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=2 SV=1; Endoplasmin (Fragment) OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=1; Endoplasmin OS=Mus musculus OX=10090 GN=Hsp90b1 PE=1 SV=2" 1 3 3 0.5 0 1 1 1 488.29813 1462.87983 1462.87822 1.1 0.00054 0/0 0 0 35072008 HCD 30 MS2 53.12624 1029.8 29.215 79.3317 24661 24661 24656 QEplus033719.raw F4 1002.9 908 1123.7 817 1196.7 1130.8 466 2.28 1 FALSE 0.0001504 0.003441 0.544 -250 125623 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RGMTVEGLK [R].rGMTVEGLk.[Q] N-Term(TMT6plex); K9(TMT6plex) 2 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 B9EIU1; Q8CGC7 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4 1 3 3 0.3919 0 1 1 1 483.62863 1448.87134 1448.86594 3.73 0.0018 0/0 0 0 11076529 HCD 30 MS2 48.44715 1275.3 108.128 79.3342 24662 24662 24656 QEplus033719.raw F4 1285.5 1046.3 1380.5 1206.3 1249.3 1483.9 377 3.93 1 FALSE 1.14E-05 0.0002592 0.778 -250 125631 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GHLLLK [R].gHLLLk.[Q] N-Term(TMT6plex); K6(TMT6plex) 2 Q3UKA1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnajc3 PE=2 SV=1 Q3UKA1; Q91YW3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Dnajc3 PE=2 SV=1; DnaJ homolog subfamily C member 3 OS=Mus musculus OX=10090 GN=Dnajc3 PE=1 SV=1 0 3 3 0.3346 0 1 1 1 380.26199 1138.77143 1138.77124 0.17 0.00006 0/0 0 0 7207958.5 HCD 30 MS2 24.01425 450.5 110 79.3367 24663 24663 24656 QEplus033719.raw F4 441.4 341.5 452.6 404.7 534.8 527.7 17 2.69 1 FALSE 0.002173 0.04165 0.169 -250 125641 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQEVETELK [R].qQEVETELk.[M] N-Term(TMT6plex); K9(TMT6plex) 8 A2RS68 U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 A0A1B0GRR8; A0A1B0GRV8; A0A1B0GR69; A2RS68; Q9CR32; Q7TT81; A0A1B0GR44; Q6ZWP0 U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=3; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 0 2 2 0.4721 0 1 1 1 781.44623 1561.88518 1561.88376 0.91 0.00071 0/0 0 0 6779345 HCD 30 MS2 53.63032 688.6 110 79.3392 24664 24664 24656 QEplus033719.raw F4 733.6 590.7 778.1 615.8 684.4 729 437 3.41 1 FALSE 1.14E-05 1.73E-06 1.192 -250 125646 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEAMTNSK [R].kLEAMTNSk.[Q] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 1 2 2 0.6374 0 1 1 1 855.01563 1709.02397 1709.02345 0.3 0.00026 0/0 0 0 2524695.25 HCD 30 MS2 0 276.4 110 79.3417 24665 24665 24656 QEplus033719.raw F4 286.8 231.6 289.5 220.7 322 307.6 346 3.53 1 FALSE 1.14E-05 3.17E-06 1.142 -250 125652 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKGTEDEVEK [K].lkGTEDEVEk.[Y] N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex) 8 P58774; A2AIM4; P58774-2 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 Q9D1R6; Q91VH3; P58774; A2AIM4; Q3SX28; P58774-2; A2AIM5; Q61344 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=8; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1 1 3 3 0.1463 0 1 1 1 612.36267 1835.07346 1835.07291 0.3 0.00018 0/0 0 0 35743572 HCD 30 MS2 11.933 1237.6 50.139 79.344 24666 24666 24656 QEplus033719.raw F4 1390.7 615.7 1355.4 1625.5 706.6 1732 423 3.69 3 TRUE 1.14E-05 1.07E-07 1.422 -250 125660 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MATNAAAQNAIK [R].mATNAAAQNAIk.[K] N-Term(TMT6plex); K12(TMT6plex) 3 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q3UHS6; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 3 3 0.7109 0 1 1 1 554.65216 1661.94193 1661.9409 0.62 0.00034 0/0 0 0 26201960 HCD 30 MS2 11.31908 688.9 57.228 79.3513 24668 24668 24667 QEplus033719.raw F4 693.7 586.5 748.8 540.9 830.7 732.8 513 4.67 1 FALSE 1.14E-05 1.11E-09 1.798 -250 125664 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HDLDLICR [KR].hDLDLIcR.[A] N-Term(TMT6plex); C7(Carbamidomethyl) 10 P63087; P62137; P62141 Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1;Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1ca PE=1 SV=1;Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cb PE=1 SV=3 Q3U8W0; P63087; P63087-2; P62137; Q3TYF5; P62141; Q3U7K1; A0A0J9YUU8; A0A0G2JGC1; A0A0G2JFF1 Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1ca PE=2 SV=1; Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1; Isoform 2 of Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cc; Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1ca PE=1 SV=1; Serine/threonine-protein phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Ppp1ca PE=2 SV=1; Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Mus musculus OX=10090 GN=Ppp1cb PE=1 SV=3; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp1cc PE=2 SV=1; Serine/threonine-protein phosphatase PP1-beta catalytic subunit (Fragment) OS=Mus musculus OX=10090 GN=Ppp1cb PE=1 SV=1; Serine/threonine-protein phosphatase OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1; Serine/threonine-protein phosphatase (Fragment) OS=Mus musculus OX=10090 GN=Ppp1cc PE=1 SV=1 0 3 3 0.6842 0 1 1 1 424.2309 1270.67813 1270.67752 0.48 0.0002 0/0 0 0 22957698 HCD 30 MS2 15.53503 360.1 60.787 79.3535 24669 24669 24667 QEplus033719.raw F4 362.9 264.5 383.6 290.4 393.1 466 206 4.75 3 FALSE 1.14E-05 5.80E-06 1.092 -250 125685 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FISETLRR [K].fISETLRR.[M] N-Term(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 1 3 3 0.5403 0 1 1 1 417.58527 1250.74125 1250.74184 -0.47 -0.0002 0/0 0 0 21729952 HCD 30 MS2 12.77253 512.5 71.977 79.3603 24672 24672 24667 QEplus033719.raw F4 541.7 428.9 563.8 422.9 566.3 551.4 357 3.72 2 FALSE 1.14E-05 1.75E-05 1.001 -250 125693 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NKHEAMITDLEER [K].nkHEAMITDLEER.[L] N-Term(TMT6plex); K2(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 1 3 3 0.655 0 1 1 1 682.03455 2044.08908 2044.08974 -0.32 -0.00022 0/0 0 0 10485006 HCD 30 MS2 9.061941 773.6 110 79.3629 24673 24673 24667 QEplus033719.raw F4 910.5 648.1 1047.2 524.5 635.8 875.4 334 4.29 1 FALSE 1.14E-05 3.82E-13 2.456 -250 125699 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NQVPINVHANPGK [K].nQVPINVHANPGk.[Y] N-Term(TMT6plex); K13(TMT6plex) 3 Z4YJF5 Myomesin-1 OS=Mus musculus OX=10090 GN=Myom1 PE=1 SV=1 Z4YJF5; Q62234; Q62234-2 Myomesin-1 OS=Mus musculus OX=10090 GN=Myom1 PE=1 SV=1; Myomesin-1 OS=Mus musculus OX=10090 GN=Myom1 PE=1 SV=2; Isoform 2 of Myomesin-1 OS=Mus musculus OX=10090 GN=Myom1 0 3 3 0.6701 0 1 1 1 616.02771 1846.06858 1846.06994 -0.74 -0.00045 0/0 0 0 4629540 HCD 30 MS2 53.3739 778.7 110 79.3654 24674 24674 24667 QEplus033719.raw F4 869.8 474.4 717 975.7 666.6 968.7 419 4.91 1 FALSE 1.14E-05 2.81E-11 2.102 -250 125727 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELSDGEIK [K].eLSDGEIk.[V] N-Term(TMT6plex); K8(TMT6plex) 4 Q52KR3 Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2 PE=1 SV=2 Q52KR3-6; Q8CA96; Q52KR3-5; Q52KR3 Isoform 6 of Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2; DHHA2 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Prune2 PE=2 SV=1; Isoform 5 of Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2; Protein prune homolog 2 OS=Mus musculus OX=10090 GN=Prune2 PE=1 SV=2 0 2 2 0.3821 0 1 1 1 674.88971 1348.77214 1348.77242 -0.2 -0.00014 0/0 0 0 6960276 HCD 30 MS2 13.30999 841.1 110 79.3802 24679 24679 24678 QEplus033719.raw F4 870.3 708.3 896.3 775.1 924.7 872.1 451 3.01 1 FALSE 5.44E-05 0.001969 0.6 -250 125740 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YHPGYFGK [K].yHPGYFGk.[V] N-Term(TMT6plex); K8(TMT6plex) 1 P14115 60S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5 P14115 60S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5 0 2 2 0.609 0 1 1 1 713.89752 1426.78777 1426.78834 -0.4 -0.00029 0/0 0 0 6138248 HCD 30 MS2 25.71322 404.5 110 79.3853 24681 24681 24678 QEplus033719.raw F4 334.2 364.1 494.1 372.1 418.4 444 314 2.66 1 FALSE 0.0006294 0.00961 0.411 -250 125748 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQTFSGGTSQDIK [K].eQTFSGGTSQDIk.[G] N-Term(TMT6plex); K13(TMT6plex) 4 Q569Z6 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1 Q569Z6; Q8BZN7; Q8R353; Q8BV76 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Thrap3 protein OS=Mus musculus OX=10090 GN=Thrap3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Thrap3 PE=2 SV=1 0 2 2 0.7458 0 1 1 1 928.49463 1855.98198 1855.98018 0.97 0.0009 0/0 0 0 5736463 HCD 30 MS2 0 369 110 79.3878 24682 24682 24678 QEplus033719.raw F4 378 371.9 399.2 263.7 437.2 363.7 345 4.72 1 FALSE 1.14E-05 5.59E-12 2.235 -250 125755 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKGTEDEVEK [K].lkGTEDEVEk.[Y] N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex) 8 P58774; A2AIM4; P58774-2 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 Q9D1R6; Q91VH3; P58774; A2AIM4; Q3SX28; P58774-2; A2AIM5; Q61344 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=8; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1 1 2 2 0.1701 0 1 1 1 918.03979 1835.07231 1835.07291 -0.32 -0.0003 0/0 0 0 4327713 HCD 30 MS2 0 333.7 110 79.3903 24683 24683 24678 QEplus033719.raw F4 364 172.6 385.1 404 196.7 479.9 430 3.41 3 TRUE 1.14E-05 1.26E-07 1.408 -250 125762 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDLQTITNDPR [R].tDLQTITNDPR.[L] N-Term(TMT6plex) 6 E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" A0A087WS16; D3YWD1; J3QQ16; Q9Z0I9; O88493; E9PWQ3 "Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen, type VI, alpha 3 (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=1; Collagen alpha3(VI) (Fragment) OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Type VI collagen alpha 3 subunit OS=Mus musculus OX=10090 GN=Col6a3 PE=2 SV=1; Collagen, type VI, alpha 3 OS=Mus musculus OX=10090 GN=Col6a3 PE=1 SV=2" 0 2 2 0.6135 0 1 1 1 751.90417 1502.80107 1502.8012 -0.09 -0.00006 0/0 0 0 2852873.5 HCD 30 MS2 0 169.8 110 79.3929 24684 24684 24678 QEplus033719.raw F4 162.2 148.8 172.2 147.3 206.2 181.8 322 3.26 1 FALSE 1.14E-05 3.92E-06 1.125 -250 125769 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQTFSGGTSQDIK [K].eQTFSGGTSQDIk.[G] N-Term(TMT6plex); K13(TMT6plex) 4 Q569Z6 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1 Q569Z6; Q8BZN7; Q8R353; Q8BV76 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Thrap3 protein OS=Mus musculus OX=10090 GN=Thrap3 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Thrap3 PE=2 SV=1 0 3 3 0.6587 0 1 1 1 619.33051 1855.97696 1855.98018 -1.73 -0.00107 0/0 0 0 17563784 HCD 30 MS2 57.63183 1124.7 75.152 79.3974 24686 24686 24678 QEplus033719.raw F4 1227.1 905.3 1150.3 851 1493.3 1121.4 329 4.16 1 FALSE 1.14E-05 3.26E-09 1.71 -250 125775 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous WSVLAGHSR [R].wSVLAGHSR.[T] N-Term(TMT6plex) 5 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q80TM2; Q0V930; Q3UHS6; Q3TBC3; P26039 MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 3 3 0.4935 0 1 1 1 414.57016 1241.69593 1241.69522 0.57 0.00024 0/0 0 0 12793914 HCD 30 MS2 8.733866 241.5 58.875 79.3997 24687 24687 24678 QEplus033719.raw F4 233.1 209.8 271.1 210.3 291.4 233 302 4.6 1 FALSE 1.14E-05 1.11E-06 1.229 -250 125783 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VCGASASPLK [R].vcGASASPLk.[V] N-Term(TMT6plex); C2(Carbamidomethyl); K10(TMT6plex) 3 Q3UQS9 Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1 O55124; Q3UQS9; Q14BI5 M-protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Myom2 PE=2 SV=1; Myomesin 2 OS=Mus musculus OX=10090 GN=Myom2 PE=1 SV=1 0 3 3 0.2723 0 1 1 1 483.2836 1447.83625 1447.83431 1.34 0.00065 0/0 0 0 16378364 HCD 30 MS2 69.93867 1009 71.919 79.4019 24688 24688 24678 QEplus033719.raw F4 994.2 827.3 1071.5 941.7 1072.7 1146.3 467 2.13 1 FALSE 0.002056 0.03693 0.186 -250 125800 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GDRCQDLSVNQDLADTDAR [K].gDRcQDLSVNQDLADTDAR.[A] N-Term(TMT6plex); C4(Carbamidomethyl) 6 B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 Q4FK88; Q3US43; Q4FJV4; Q3U5N9; A0A494BBD8; B7STB7 Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=1 SV=1; Annexin OS=Mus musculus OX=10090 GN=Anxa1 PE=2 SV=1 1 3 3 0.8005 0 1 1 1 793.37738 2378.11759 2378.12038 -1.17 -0.00093 0/0 0 0 6333532.5 HCD 30 MS2 0 198.1 110 79.4117 24691 24691 24689 QEplus033719.raw F4 193 220.6 242.4 107.2 264.2 161.3 82 7.32 1 FALSE 1.14E-05 6.31E-16 4.232 -250 125805 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FMETSAK [K].fMETSAk.[A] N-Term(TMT6plex); K7(TMT6plex) 2 Q3UHW5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab8a PE=2 SV=1 Q3UHW5; Q0PD50 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab8a PE=2 SV=1; Rab8A OS=Mus musculus OX=10090 GN=Rab8a PE=1 SV=1 0 2 2 0.4429 0 1 1 1 636.35876 1271.71025 1271.70698 2.57 0.00164 0/0 0 0 10473798 HCD 30 MS2 9.400598 1107.3 110 79.4143 24692 24692 24689 QEplus033719.raw F4 1082.3 994.6 1213.4 932.6 1249.6 1171.5 296 2.8 1 FALSE 0.000565 0.008642 0.427 -250 125817 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NSQFSGGPLGNPNTTAR [R].nSQFSGGPLGNPNTTAR.[V] N-Term(TMT6plex) 6 Q3UL43 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nup155 PE=2 SV=1 Q3UL43; Q99P88; Q6ZQ45; Q80X48; Q8BUA6; A0A2R8VHH1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Nup155 PE=2 SV=1; Nuclear pore complex protein Nup155 OS=Mus musculus OX=10090 GN=Nup155 PE=1 SV=1; MKIAA0791 protein (Fragment) OS=Mus musculus OX=10090 GN=Nup155 PE=2 SV=1; Nucleoporin 155 OS=Mus musculus OX=10090 GN=Nup155 PE=2 SV=1; Nucleoporin_N domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Nup155 PE=2 SV=1; Nuclear pore complex protein Nup155 OS=Mus musculus OX=10090 GN=Nup155 PE=1 SV=1 0 3 3 0.499 0 1 1 1 649.6662 1946.98404 1946.98817 -2.12 -0.00137 0/0 0 0 4326724.5 HCD 30 MS2 12.83639 531 110 79.4193 24694 24694 24689 QEplus033719.raw F4 531.1 426 546.3 439.8 569 673.9 260 5.15 1 FALSE 1.14E-05 6.63E-12 2.221 -250 125846 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TAEVLANK [R].tAEVLANk.[I] N-Term(TMT6plex); K8(TMT6plex) 2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q9JHU4; O08821 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2; Cytoplasmic dynein heavy chain (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1 0 2 2 0.5072 0 1 1 1 652.40369 1303.8001 1303.79857 1.17 0.00076 0/0 0 0 12582668 HCD 30 MS2 44.93566 1025.1 110 79.4265 24697 24697 24689 QEplus033719.raw F4 1060.3 931.3 1138.7 870.8 1062 1087.7 505 2.78 1 FALSE 1.14E-05 0.0001531 0.822 -250 125853 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QQEVETELK [R].qQEVETELk.[M] N-Term(TMT6plex); K9(TMT6plex) 8 A2RS68 U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 A0A1B0GRR8; A0A1B0GRV8; A0A1B0GR69; A2RS68; Q9CR32; Q7TT81; A0A1B0GR44; Q6ZWP0 U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=3; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1; U1 small nuclear ribonucleoprotein 70 kDa (Fragment) OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=1; U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=2 SV=1 0 3 3 0.3065 0 1 1 1 521.30023 1561.88614 1561.88376 1.53 0.00079 0/0 0 0 10296613 HCD 30 MS2 88.83583 1685 110 79.429 24698 24698 24689 QEplus033719.raw F4 1844.8 1310.6 1831.7 1100.2 2185.4 1837.6 418 1.99 1 FALSE 0.001607 0.02542 0.242 -250 125869 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNVVEQEK [K].vNVVEQEk.[I] N-Term(TMT6plex); K8(TMT6plex) 5 Q5FW97; B0QZL1 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1;2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 Q8CF78; Q5FW97; B0QZL1; Q6PHC1; B1ARR7 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1; Alpha-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 0 3 3 0.6792 0 1 1 1 468.2821 1402.83176 1402.8306 0.83 0.00039 0/0 0 0 116488816 HCD 30 MS2 22.19683 561 12.271 79.4388 24701 24701 24700 QEplus033719.raw F4 561.1 397.8 615.7 529.6 568.8 693 505 3.46 2 FALSE 0.0006477 0.009929 0.406 -250 125888 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADNLIPGTR [R].aDNLIPGTR.[A] N-Term(TMT6plex) 1 Q9JHU9 Inositol-3-phosphate synthase 1 OS=Mus musculus OX=10090 GN=Isyna1 PE=1 SV=1 Q9JHU9 Inositol-3-phosphate synthase 1 OS=Mus musculus OX=10090 GN=Isyna1 PE=1 SV=1 0 2 2 0.5404 0 1 1 1 593.34351 1185.67974 1185.6789 0.7 0.00042 0/0 0 0 12656067 HCD 30 MS2 41.44838 1074.8 110 79.4461 24704 24704 24700 QEplus033719.raw F4 1480 925.8 1060.6 835.3 1067.9 1079.3 255 2.85 1 FALSE 0.0003996 0.007041 0.457 -250 125894 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GNEMSEVLR [R].gNEMSEVLR.[D] N-Term(TMT6plex) 2 P50516 V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a PE=1 SV=2 P50516; P50516-2 V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a PE=1 SV=2; Isoform 2 of V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a 0 2 2 0.3645 0 1 1 1 632.32996 1263.65264 1263.65645 -3.02 -0.00191 0/0 0 0 11639837 HCD 30 MS2 53.11839 1335.4 110 79.4487 24705 24705 24700 QEplus033719.raw F4 1214 1175.3 1486.5 1157.3 1461.7 1517.6 209 2.14 1 FALSE 0.0001603 0.003513 0.541 -250 125907 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NEDLNAEEVYGR [K].nEDLNAEEVYGR.[L] N-Term(TMT6plex) 1 Q8K0C4 Lanosterol 14-alpha demethylase OS=Mus musculus OX=10090 GN=Cyp51a1 PE=1 SV=1 Q8K0C4 Lanosterol 14-alpha demethylase OS=Mus musculus OX=10090 GN=Cyp51a1 PE=1 SV=1 0 2 2 0.7252 0 1 1 1 819.40204 1637.7968 1637.79684 -0.03 -0.00002 0/0 0 0 6946502 HCD 30 MS2 14.08305 406.7 110 79.4537 24707 24707 24700 QEplus033719.raw F4 412.9 332.8 480.1 364.9 369.2 480.5 134 4.04 1 FALSE 1.14E-05 2.91E-10 1.909 -250 125916 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLGSNEDGLQK [R].gLGSNEDGLQk.[L] N-Term(TMT6plex); K11(TMT6plex) 7 Q8C0E3 E3 ubiquitin-protein ligase TRIM47 OS=Mus musculus OX=10090 GN=Trim47 PE=1 SV=2 Q8C0E3-2; B7ZN75; Q8C0E3; Q7TMQ8; Q66JW4; Q497Z1; A3KMJ7 Isoform 2 of E3 ubiquitin-protein ligase TRIM47 OS=Mus musculus OX=10090 GN=Trim47; Trim47 protein OS=Mus musculus OX=10090 GN=Trim47 PE=2 SV=1; E3 ubiquitin-protein ligase TRIM47 OS=Mus musculus OX=10090 GN=Trim47 PE=1 SV=2; Trim47 protein (Fragment) OS=Mus musculus OX=10090 GN=Trim47 PE=2 SV=1; Trim47 protein (Fragment) OS=Mus musculus OX=10090 GN=Trim47 PE=2 SV=1; Trim47 protein (Fragment) OS=Mus musculus OX=10090 GN=Trim47 PE=2 SV=1; Tripartite motif-containing 47 OS=Mus musculus OX=10090 GN=Trim47 PE=2 SV=1 0 2 2 0.5543 0 1 1 1 788.44208 1575.87688 1575.87426 1.66 0.00131 0/0 0 0 6855520.5 HCD 30 MS2 13.54896 453.1 110 79.4562 24708 24708 24700 QEplus033719.raw F4 438.8 434 516 371.8 464.4 493.5 404 3.68 1 FALSE 1.14E-05 5.76E-10 1.853 -250 125923 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEGDLK [RK].kLEGDLk.[LDM] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 20 Q69ZX3; Q5SX40; P13541; Q5SX39; B2RY26; P13542 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q69ZX3; A0A2R8VHF9; Q5SX40; P13541; Q5SX39; A0A338P6K2; G3UW82; B2RWX0; B2RQQ1; O08638-2; O08638; I6L963; B1AR69; B2RY26; E9QPE7; A2AQP0; B2RXX9; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2; Myosin-7B OS=Mus musculus OX=10090 GN=Myh7b PE=3 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 2 2 0.2894 0 1 1 1 745.48242 1489.95757 1489.95569 1.26 0.00094 0/0 0 0 4850322.5 HCD 30 MS2 42.2665 667.1 110 79.4588 24709 24709 24700 QEplus033719.raw F4 1170.4 353.8 444.5 1055.1 418 560.9 378 2.35 6 FALSE 0.001335 0.01868 0.293 -250 125955 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEGDLK [RK].kLEGDLk.[LDM] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 20 Q69ZX3; Q5SX40; P13541; Q5SX39; B2RY26; P13542 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; B2RWW8; Q69ZX3; A0A2R8VHF9; Q5SX40; P13541; Q5SX39; A0A338P6K2; G3UW82; B2RWX0; B2RQQ1; O08638-2; O08638; I6L963; B1AR69; B2RY26; E9QPE7; A2AQP0; B2RXX9; P13542 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2; Myosin-7B OS=Mus musculus OX=10090 GN=Myh7b PE=3 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 1 3 3 0.3213 0 1 1 1 497.32422 1489.9581 1489.95569 1.62 0.0008 0/0 0 0 127113160 HCD 30 MS2 22.254 1314.8 13.632 79.4733 24714 24714 24711 QEplus033719.raw F4 3001.3 287.6 551.3 2584.8 486.2 977.3 376 2.49 6 FALSE 1.14E-05 0.0004988 0.722 -250 125979 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GPDVDIK [K].gPDVDIk.[G] N-Term(TMT6plex); K7(TMT6plex) 3 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 Q6UL10; E9Q616; A0JLR7 AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1 0 2 2 0.481 0 1 1 1 601.36395 1201.72063 1201.71926 1.14 0.00068 0/0 0 0 31984806 HCD 30 MS2 15.98071 1932 110 79.4803 24717 24717 24711 QEplus033719.raw F4 2120.1 1813.4 2089.3 1361.4 2292.7 1914.9 317 2.37 1 FALSE 0.0008991 0.01241 0.367 -250 125985 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KATDAEADVASLNRR [K].kATDAEADVASLNRR.[I] N-Term(TMT6plex); K1(TMT6plex) 17 P58774; A2AIM4; P58774-2; E9Q450 Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1;Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2;Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1 Q9D1R6; Q91VH3; Q8BSH3; E9Q452; P58774; F8WID5; S4R2U0; A2AIM4; Q3SX28; P58774-2; A2AIM5; E9Q454; Q61344; E9Q450; Q564G1; Q8BP43; P58771 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tpm2 protein OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=1; TREMBL:Q3SX28;Q5KR48 (Bos taurus) Tropomyosin 2; Isoform 2 of Tropomyosin beta chain OS=Mus musculus OX=10090 GN=Tpm2; Tropomyosin beta chain (Fragment) OS=Mus musculus OX=10090 GN=Tpm2 PE=1 SV=8; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Beta-tropomyosin OS=Mus musculus OX=10090 GN=Tpm2 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin 1, alpha OS=Mus musculus OX=10090 GN=Tpm1 PE=2 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Mus musculus OX=10090 GN=Tpm1 PE=1 SV=1" 2 3 3 0.6243 0 1 1 1 692.39227 2075.16227 2075.16094 0.64 0.00044 0/0 0 0 16655776 HCD 30 MS2 17.78577 378.2 110 79.4828 24718 24718 24711 QEplus033719.raw F4 378.8 260.3 419.9 361.7 349.9 498.5 464 5.11 4 TRUE 1.14E-05 6.31E-16 3.529 -250 126004 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VNVVEQEK [K].vNVVEQEk.[I] N-Term(TMT6plex); K8(TMT6plex) 5 Q5FW97; B0QZL1 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1;2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 Q8CF78; Q5FW97; B0QZL1; Q6PHC1; B1ARR7 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 PE=2 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=EG433182 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1; 2-phospho-D-glycerate hydro-lyase OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1; Alpha-enolase (Fragment) OS=Mus musculus OX=10090 GN=Eno1 PE=1 SV=1 0 2 2 0.6508 0 1 1 1 701.91919 1402.8311 1402.8306 0.36 0.00025 0/0 0 0 94228384 HCD 30 MS2 12.56252 661.8 17.337 79.4977 24723 24723 24722 QEplus033719.raw F4 607.6 468.3 734.2 694.3 622.8 843.7 506 3.78 2 FALSE 1.14E-05 0.000162 0.817 -250 126038 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVINSAGYK [R].aVINSAGYk.[V] N-Term(TMT6plex); K9(TMT6plex) 1 Q8R1F1 Protein Niban 2 OS=Mus musculus OX=10090 GN=Niban2 PE=1 SV=2 Q8R1F1 Protein Niban 2 OS=Mus musculus OX=10090 GN=Niban2 PE=1 SV=2 0 2 2 0.6227 0 1 1 1 690.9176 1380.82793 1380.82512 2.03 0.0014 0/0 0 0 13911987 HCD 30 MS2 11.76317 941.5 110 79.514 24730 24730 24722 QEplus033719.raw F4 875.9 947.9 1100.3 724.8 1062.7 937.2 269 3.79 1 FALSE 1.14E-05 1.36E-06 1.212 -250 126046 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FCECDNFNCDR [K].fcEcDNFNcDR.[S] N-Term(TMT6plex); C2(Carbamidomethyl); C4(Carbamidomethyl); C9(Carbamidomethyl) 2 P09055 Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 P09055-2; P09055 Isoform 2 of Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1; Integrin beta-1 OS=Mus musculus OX=10090 GN=Itgb1 PE=1 SV=1 0 2 2 1 0 1 1 1 883.35114 1765.69499 1765.69299 1.13 0.001 0/0 0 0 8498989 HCD 30 MS2 33.47744 725 110 79.5165 24731 24731 24722 QEplus033719.raw F4 759 607.4 779.8 611 814.4 778.3 3 4.53 1 FALSE 1.14E-05 6.90E-08 1.458 -250 126047 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLVGEPGPAGSK [R].gLVGEPGPAGSk.[G] N-Term(TMT6plex); K12(TMT6plex) 3 Q01149 Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2 Q3TUE2; Q01149; Q3TU64 Fibrillar collagen NC1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1; Collagen alpha-2(I) chain OS=Mus musculus OX=10090 GN=Col1a2 PE=1 SV=2; Fibrillar collagen NC1 domain-containing protein OS=Mus musculus OX=10090 GN=Col1a2 PE=2 SV=1 0 2 2 0.721 0 1 1 1 763.95374 1526.90019 1526.89426 3.88 0.00297 0/0 0 0 6289966 HCD 30 MS2 0 459 110 79.519 24732 24732 24722 QEplus033719.raw F4 418.4 540.4 551.2 234 547.3 462.6 309 3.62 1 FALSE 1.14E-05 2.25E-11 2.12 -250 126074 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LGAPALTSR [R].lGAPALTSR.[Q] N-Term(TMT6plex) 2 Q9CZN7 "Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" Q9CZN7-2; Q9CZN7 "Isoform 2 of Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2; Serine hydroxymethyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Shmt2 PE=1 SV=1" 0 2 2 0.4983 0 1 1 1 557.84296 1114.67864 1114.67817 0.41 0.00023 0/0 0 0 72441344 HCD 30 MS2 15.43952 567.7 18.8 79.5311 24736 24736 24733 QEplus033719.raw F4 513.1 477.7 655.7 526.7 570 662.7 223 2.87 1 FALSE 1.14E-05 4.55E-05 0.922 -250 126084 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KTVMIK [K].kTVMIk.[T] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 2 Q3V2C6 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1 Q3V2C6; P31001 IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Des PE=2 SV=1; Desmin OS=Mus musculus OX=10090 GN=Des PE=1 SV=3 1 3 3 0.1916 0 1 1 1 469.65085 1406.93799 1406.9372 0.56 0.00026 0/0 0 0 63090792 HCD 30 MS2 20.71448 1048.6 19.867 79.5333 24737 24737 24733 QEplus033719.raw F4 1146.3 402.8 929.5 1951.4 527.5 1334.3 64 3.08 1 FALSE 0.001456 0.02091 0.273 -250 126094 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GTGSTTGKPLHFK [K].gTGSTTGkPLHFk.[G] N-Term(TMT6plex); K8(TMT6plex); K13(TMT6plex) 3 Q9CR16 Peptidyl-prolyl cis-trans isomerase D OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=3 A0A0A6YW70; Q9CR16; Q3UB60 Peptidyl-prolyl cis-trans isomerase D (Fragment) OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=1; Peptidyl-prolyl cis-trans isomerase D OS=Mus musculus OX=10090 GN=Ppid PE=1 SV=3; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppid PE=2 SV=1 0 4 4 0.6203 0 1 1 1 505.3056 2018.20058 2018.20017 0.2 0.0001 0/0 0 0 24486018 HCD 30 MS2 47.92726 738 31.538 79.5356 24738 24738 24733 QEplus033719.raw F4 828.6 620 796.6 643.9 859.6 679.5 325 3.74 1 FALSE 1.14E-05 2.17E-08 1.553 -250 126106 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CQGVVCAMK [R].cQGVVcAMk.[E] N-Term(TMT6plex); C1(Carbamidomethyl); C6(Carbamidomethyl); K9(TMT6plex) 10 Q3U1S6 Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1 A0A0G2JF72; A0A0G2JE62; A0A0G2JDJ7; Q3U1S6; Q8JZN2; Q8R3R1; Q3U672; Q3U4S7; Q3TXH7; Q80TP8 Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Cold shock domain-containing protein E1 (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Cold shock domain-containing protein E1 (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1; Csde1 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1; MKIAA0885 protein (Fragment) OS=Mus musculus OX=10090 GN=Csde1 PE=2 SV=1 0 2 2 0.63 0 1 1 1 755.90112 1510.79497 1510.79443 0.36 0.00027 0/0 0 0 12064755 HCD 30 MS2 24.4824 837.2 110 79.5406 24740 24740 24733 QEplus033719.raw F4 866.4 703 933.7 668.1 979.6 872.6 277 4 1 FALSE 1.14E-05 1.34E-06 1.213 -250 126114 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NCGQMSEIEAK [K].ncGQMSEIEAk.[V] N-Term(TMT6plex); C2(Carbamidomethyl); K11(TMT6plex) 4 P26039 Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q8C9Z8; Q80TM2; Q3UHS6; P26039 FERM domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 0 2 2 0.8367 0 1 1 1 862.94061 1724.87395 1724.87116 1.62 0.00139 0/0 0 0 8365319 HCD 30 MS2 0 559.1 110 79.5432 24741 24741 24733 QEplus033719.raw F4 632.2 523.4 593.8 405.4 737.3 462.4 230 4.41 1 FALSE 1.14E-05 1.33E-09 1.784 -250 126119 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IMNEEDPEK [R].iMNEEDPEk.[Q] N-Term(TMT6plex); K9(TMT6plex) 5 Q0VBU4 Coiled-coil domain-containing protein 47 OS=Mus musculus OX=10090 GN=Ccdc47 PE=2 SV=1 Q9D024-2; Q9D024-3; Q0VBU4; F7C265; B1AR93 Isoform 2 of PAT complex subunit CCDC47 OS=Mus musculus OX=10090 GN=Ccdc47; Isoform 3 of PAT complex subunit CCDC47 OS=Mus musculus OX=10090 GN=Ccdc47; Coiled-coil domain-containing protein 47 OS=Mus musculus OX=10090 GN=Ccdc47 PE=2 SV=1; Coiled-coil domain-containing protein 47 (Fragment) OS=Mus musculus OX=10090 GN=Ccdc47 PE=1 SV=1; Coiled-coil domain-containing protein 47 (Fragment) OS=Mus musculus OX=10090 GN=Ccdc47 PE=1 SV=1 0 3 3 0.5515 0 1 1 1 521.60974 1562.81467 1562.81363 0.67 0.00035 0/0 0 0 3442912.5 HCD 30 MS2 49.98239 959.9 110 79.5456 24742 24742 24733 QEplus033719.raw F4 959 815.9 1006.8 822.4 1015.6 1139.8 251 2.72 1 FALSE 0.001204 0.0163 0.317 -250 126134 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AFGPGLQGGNAGSPAR [K].aFGPGLQGGNAGSPAR.[F] N-Term(TMT6plex) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; Q6KAM8; B7FAV1; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; MFLJ00343 protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 2 2 0.6847 0 1 1 1 843.44946 1685.89165 1685.89208 -0.26 -0.00022 0/0 0 0 16762971 HCD 30 MS2 6.773395 401 110 79.5555 24745 24745 24744 QEplus033719.raw F4 368.7 427.7 419.9 230.3 602.5 356.7 301 4.63 1 FALSE 1.14E-05 6.31E-16 3.081 -250 126143 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANIDVSGPK [K].aNIDVSGPk.[V] N-Term(TMT6plex); K9(TMT6plex) 5 E9Q616 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1 A0PJF4; Q6UL10; E9Q616; A0JLR7; Q61484 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Desmoyokin (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1 0 3 3 0.4854 0 1 1 1 453.60638 1358.8046 1358.80439 0.16 0.00007 0/0 0 0 11246650 HCD 30 MS2 35.5025 698.9 110 79.558 24746 24746 24744 QEplus033719.raw F4 695 606.4 715.7 513 894.8 768.2 377 3.42 1 FALSE 1.14E-05 1.09E-05 1.04 -250 126147 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISAPGVK [K].iSAPGVk.[M] N-Term(TMT6plex); K7(TMT6plex) 6 E9Q616; Q6UIL4 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1;AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1 A0PJF4; E9Q616; Q6UIL4; Q8CGE7; Q8VDN3; Q8BKS2 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=2 0 2 2 0.2646 0 1 1 1 565.37109 1129.73491 1129.73452 0.35 0.0002 0/0 0 0 122236424 HCD 30 MS2 10.85863 834.7 11.674 79.5602 24747 24747 24744 QEplus033719.raw F4 789.8 938.3 934.1 562.7 1002.4 780.9 200 2.57 2 FALSE 0.0008183 0.01125 0.385 -250 126174 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLQDVR [K].lLQDVR.[Q] N-Term(TMT6plex) 5 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q80U36; Q9JHU4; Q8VHR0; Q8C6T5; Q923F5 MKIAA0325 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2; Protocadherin 18 OS=Mus musculus OX=10090 GN=Pcdh18 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Dync1h1 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1 0 2 2 0.1111 0 1 1 3 486.80573 972.60417 972.60395 0.23 0.00011 0/0 0 0 26994748 HCD 30 MS2 36.65153 851.8 47.816 79.567 24750 24750 24744 QEplus033719.raw F4 805.9 674.9 979.3 699.3 892.7 1058.5 192 2.25 1 FALSE 0.00192 0.03283 0.203 -250 126196 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ANIAGATDVK [K].aNIAGATDVk.[W] N-Term(TMT6plex); K10(TMT6plex) 8 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; Q8C139; A0A5K1VVQ9; Q8R112; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Ttn protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.4601 0 1 1 1 709.42548 1417.84368 1417.8415 1.53 0.00109 0/0 0 0 10512198 HCD 30 MS2 49.34063 764.8 110 79.5743 24753 24753 24744 QEplus033719.raw F4 825 397.1 693.5 1041.6 447.4 1184.3 535 3.13 2 FALSE 1.14E-05 7.08E-07 1.266 -250 126214 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIEENNNFSK [K].aIEENNNFSk.[M] N-Term(TMT6plex); K10(TMT6plex) 8 Q91XT3 Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1 Q9CXQ8; Q91XT3; Q9DCP3; D3Z5N2; Q9CYU5; Q8C2H3; D3Z1Z8; P54227 Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin (Fragment) OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=2 0 2 2 0.6013 0 1 1 1 812.44147 1623.87566 1623.87426 0.86 0.0007 0/0 0 0 14361763 HCD 30 MS2 0 738.8 110 79.584 24756 24756 24755 QEplus033719.raw F4 796.8 914 669 346.2 1218.4 488.3 392 4.64 1 FALSE 1.14E-05 1.82E-08 1.568 -250 126215 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALEENNNFSK [K].aLEENNNFSk.[M] N-Term(TMT6plex); K10(TMT6plex) 2 P55821 Stathmin-2 OS=Mus musculus OX=10090 GN=Stmn2 PE=1 SV=1 Q9CZ46; P55821 Uncharacterized protein OS=Mus musculus OX=10090 GN=Stmn2 PE=2 SV=1; Stathmin-2 OS=Mus musculus OX=10090 GN=Stmn2 PE=1 SV=1 0 2 2 0.6013 0 1 2 2 812.44147 1623.87566 1623.87426 0.86 0.0007 0/0 0 0 14361763 HCD 30 MS2 0 738.8 110 79.584 24756 24756 24755 QEplus033719.raw F4 796.8 914 669 346.2 1218.4 488.3 392 4.64 1 FALSE 1.14E-05 1.82E-08 1.568 -250 126222 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISAPGVK [K].iSAPGVk.[M] N-Term(TMT6plex); K7(TMT6plex) 6 E9Q616; Q6UIL4 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1;AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1 A0PJF4; E9Q616; Q6UIL4; Q8CGE7; Q8VDN3; Q8BKS2 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=2 0 3 3 0.1892 0 1 1 1 377.24994 1129.73526 1129.73452 0.66 0.00025 0/0 0 0 8535891 HCD 30 MS2 46.6688 674.3 110 79.5865 24757 24757 24755 QEplus033719.raw F4 588.8 598.1 759.9 555.2 721.2 822.9 200 2.22 2 FALSE 0.001506 0.02202 0.265 -250 126238 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LYDQHLGK [K].lYDQHLGk.[S] N-Term(TMT6plex); K8(TMT6plex) 5 P13541; P13542 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; P13541; Q5DTH2; B1AR69; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; MKIAA4211 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 3 3 0.6503 0 1 1 1 477.95041 1431.83667 1431.83602 0.46 0.00022 0/0 0 0 49946736 HCD 30 MS2 16.6578 1144.1 39.572 79.591 24759 24759 24755 QEplus033719.raw F4 1355.9 342.7 952.6 2067 453.7 1692.6 462 2.86 2 FALSE 4.43E-05 0.001641 0.617 -250 126254 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AIEENNNFSK [K].aIEENNNFSk.[M] N-Term(TMT6plex); K10(TMT6plex) 8 Q91XT3 Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1 Q9CXQ8; Q91XT3; Q9DCP3; D3Z5N2; Q9CYU5; Q8C2H3; D3Z1Z8; P54227 Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=2 SV=1; Stathmin (Fragment) OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=1; Stathmin OS=Mus musculus OX=10090 GN=Stmn1 PE=1 SV=2 0 3 3 0.5912 0 1 1 1 541.96356 1623.87613 1623.87426 1.16 0.00063 0/0 0 0 29224180 HCD 30 MS2 30.77645 949.5 62.315 79.5955 24761 24761 24755 QEplus033719.raw F4 1008.2 907.4 848.8 686.7 1245 1000.8 386 3.62 1 FALSE 0.0001707 0.003864 0.531 -250 126255 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALEENNNFSK [K].aLEENNNFSk.[M] N-Term(TMT6plex); K10(TMT6plex) 2 P55821 Stathmin-2 OS=Mus musculus OX=10090 GN=Stmn2 PE=1 SV=1 Q9CZ46; P55821 Uncharacterized protein OS=Mus musculus OX=10090 GN=Stmn2 PE=2 SV=1; Stathmin-2 OS=Mus musculus OX=10090 GN=Stmn2 PE=1 SV=1 0 3 3 0.5912 0 1 2 2 541.96356 1623.87613 1623.87426 1.16 0.00063 0/0 0 0 29224180 HCD 30 MS2 30.77645 949.5 62.315 79.5955 24761 24761 24755 QEplus033719.raw F4 1008.2 907.4 848.8 686.7 1245 1000.8 386 3.62 1 FALSE 0.0001707 0.003864 0.531 -250 126261 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FQNDRTEDEQFNDEK [K].fQNDRTEDEQFNDEk.[T] N-Term(TMT6plex); K15(TMT6plex) 2 Q06138 Calcium-binding protein 39 OS=Mus musculus OX=10090 GN=Cab39 PE=1 SV=2 Q06138; Q8K312 Calcium-binding protein 39 OS=Mus musculus OX=10090 GN=Cab39 PE=1 SV=2; Cab39 protein (Fragment) OS=Mus musculus OX=10090 GN=Cab39 PE=2 SV=1 1 3 3 0.6366 0 1 1 1 791.71771 2373.13858 2373.1359 1.13 0.00089 0/0 0 0 4605857 HCD 30 MS2 0 390.4 110 79.5981 24762 24762 24755 QEplus033719.raw F4 413.5 305.5 454.8 317.7 384.3 466.9 130 4.76 1 FALSE 1.14E-05 6.31E-16 3.158 -250 126271 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FIEQEK [R].fIEQEk.[A] N-Term(TMT6plex); K6(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.1524 0 1 1 1 417.91675 1251.73569 1251.73491 0.62 0.00026 0/0 0 0 10178740 HCD 30 MS2 30.48767 599.6 110 79.6005 24763 24763 24755 QEplus033719.raw F4 632.1 475.3 626.2 510 604.3 749.8 371 2.69 2 FALSE 0.008399 0.1463 -0.083 -250 126279 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TTYMDPTGK [K].tTYMDPTGk.[T] N-Term(TMT6plex); K9(TMT6plex) 3 Q9JKX6 ADP-sugar pyrophosphatase OS=Mus musculus OX=10090 GN=Nudt5 PE=1 SV=1 A2ATT5; A0A0A6YVU1; Q9JKX6 ADP-sugar pyrophosphatase (Fragment) OS=Mus musculus OX=10090 GN=Nudt5 PE=1 SV=1; ADP-sugar pyrophosphatase (Fragment) OS=Mus musculus OX=10090 GN=Nudt5 PE=1 SV=1; ADP-sugar pyrophosphatase OS=Mus musculus OX=10090 GN=Nudt5 PE=1 SV=1 0 2 2 0.5147 0 1 1 1 736.39575 1471.78423 1471.78669 -1.67 -0.00123 0/0 0 0 9823943 HCD 30 MS2 43.87899 672.3 110 79.6031 24764 24764 24755 QEplus033719.raw F4 671.7 565.8 736.3 555.3 806.3 698.4 262 3.4 1 FALSE 1.14E-05 1.75E-06 1.191 -250 126287 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ISAPGVK [K].iSAPGVk.[M] N-Term(TMT6plex); K7(TMT6plex) 6 E9Q616; Q6UIL4 AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1;AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1 A0PJF4; E9Q616; Q6UIL4; Q8CGE7; Q8VDN3; Q8BKS2 Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; AHNAK nucleoprotein (desmoyokin) OS=Mus musculus OX=10090 GN=Ahnak PE=1 SV=1; AHNAK (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=4 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Ahnak protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ahnak PE=2 SV=2 0 3 3 0.2122 0 1 1 1 377.24994 1129.73526 1129.73452 0.66 0.00025 0/0 0 0 8535891 HCD 30 MS2 9.74264 674.3 110 79.6056 24765 24765 24755 QEplus033719.raw F4 588.8 598.1 759.9 555.2 721.2 822.9 200 2.45 2 FALSE 0.0008718 0.01213 0.371 -250 126296 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EFCENLSADCR [K].eFcENLSADcR.[E] N-Term(TMT6plex); C3(Carbamidomethyl); C10(Carbamidomethyl) 4 Q76MZ3 Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=3 G3UWL2; Q7TMX2; Q8C2E1; Q76MZ3 "Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform (Fragment) OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=1; Protein phosphatase 2 (Formerly 2A), regulatory subunit A (PR 65), alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Ppp2r1a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus OX=10090 GN=Ppp2r1a PE=1 SV=3" 0 2 2 0.8797 0 1 1 1 815.36407 1629.72087 1629.71986 0.62 0.00051 0/0 0 0 13830302 HCD 30 MS2 5.785847 431.6 110 79.6129 24767 24767 24766 QEplus033719.raw F4 479.4 369.1 471.1 364.1 450 455.9 14 4.24 1 FALSE 1.14E-05 4.69E-08 1.49 -250 126302 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IMNEEDPEK [R].iMNEEDPEk.[Q] N-Term(TMT6plex); K9(TMT6plex) 5 Q0VBU4 Coiled-coil domain-containing protein 47 OS=Mus musculus OX=10090 GN=Ccdc47 PE=2 SV=1 Q9D024-2; Q9D024-3; Q0VBU4; F7C265; B1AR93 Isoform 2 of PAT complex subunit CCDC47 OS=Mus musculus OX=10090 GN=Ccdc47; Isoform 3 of PAT complex subunit CCDC47 OS=Mus musculus OX=10090 GN=Ccdc47; Coiled-coil domain-containing protein 47 OS=Mus musculus OX=10090 GN=Ccdc47 PE=2 SV=1; Coiled-coil domain-containing protein 47 (Fragment) OS=Mus musculus OX=10090 GN=Ccdc47 PE=1 SV=1; Coiled-coil domain-containing protein 47 (Fragment) OS=Mus musculus OX=10090 GN=Ccdc47 PE=1 SV=1 0 2 2 0.6486 0 1 1 1 781.91119 1562.81511 1562.81363 0.95 0.00074 0/0 0 0 6254648.5 HCD 30 MS2 57.19143 502.3 110 79.6154 24768 24768 24766 QEplus033719.raw F4 446.5 388.8 557.2 514.6 509 597.5 250 2.76 1 FALSE 1.14E-05 1.19E-05 1.033 -250 126310 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LRDDFEK [K].lRDDFEk.[K] N-Term(TMT6plex); K7(TMT6plex) 4 Q569Z6 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1 Q569Z6; Q91VL2; Q8BZN7; Q8BV76 Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Thrap3 protein (Fragment) OS=Mus musculus OX=10090 GN=Thrap3 PE=2 SV=1; Thyroid hormone receptor-associated protein 3 OS=Mus musculus OX=10090 GN=Thrap3 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Thrap3 PE=2 SV=1 1 3 3 0.3821 0 1 1 1 460.93396 1380.78733 1380.78874 -1.02 -0.00047 0/0 0 0 33852660 HCD 30 MS2 14.42339 714.5 24.734 79.6177 24769 24769 24766 QEplus033719.raw F4 685.7 669 775.7 538.2 897.8 720.6 406 2.8 1 FALSE 0.001787 0.03084 0.212 -250 126316 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AVLDANDPKK [R].aVLDANDPkk.[N] N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex) 4 Q3US15 NAD(P)-dependent steroid dehydrogenase-like protein OS=Mus musculus OX=10090 GN=Nsdhl PE=1 SV=1 U3M993; Q3US15; Q8VE30; Q7TPY3 NAD(P)-dependent steroid dehydrogenase-like protein OS=Mus musculus OX=10090 GN=Nsdhl PE=2 SV=1; NAD(P)-dependent steroid dehydrogenase-like protein OS=Mus musculus OX=10090 GN=Nsdhl PE=1 SV=1; NAD(P) dependent steroid dehydrogenase-like OS=Mus musculus OX=10090 GN=Nsdhl PE=2 SV=1; NAD(P) dependent steroid dehydrogenase-like OS=Mus musculus OX=10090 GN=Nsdhl PE=2 SV=1 1 3 3 0.5791 0 1 1 1 586.69586 1758.07303 1758.07285 0.11 0.00006 0/0 0 0 32047530 HCD 30 MS2 16.0505 1070.5 34.67 79.6199 24770 24770 24766 QEplus033719.raw F4 1063.9 834.1 1256.8 988.5 936.4 1343.5 302 2.78 1 FALSE 1.14E-05 1.59E-05 1.009 -250 126325 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VQDPVTAKPK [R].vQDPVTAkPk.[L] N-Term(TMT6plex); K8(TMT6plex); K10(TMT6plex) 2 P18155 "Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial OS=Mus musculus OX=10090 GN=Mthfd2 PE=1 SV=1" P18155; Q3U8E7 "Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial OS=Mus musculus OX=10090 GN=Mthfd2 PE=1 SV=1; Methenyltetrahydrofolate cyclohydrolase OS=Mus musculus OX=10090 GN=Mthfd2 PE=2 SV=1" 0 3 3 0.6603 0 1 1 1 590.70807 1770.10965 1770.10923 0.24 0.00014 0/0 0 0 31386446 HCD 30 MS2 27.25936 1340.7 66.669 79.6222 24771 24771 24766 QEplus033719.raw F4 1410.1 1010.9 1400.5 1490.1 1138.2 1594.6 187 4.18 1 FALSE 1.14E-05 1.73E-08 1.572 -250 126331 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LYVHEAVK [R].lYVHEAVk.[A] N-Term(TMT6plex); K8(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 3 3 0.5134 0 1 1 1 472.95898 1416.8624 1416.86151 0.63 0.0003 0/0 0 0 25232412 HCD 30 MS2 37.30246 1250.6 55.174 79.6245 24772 24772 24766 QEplus033719.raw F4 1173.8 1104.4 1368.4 1062.3 1344.8 1449.7 494 3.74 2 FALSE 1.14E-05 9.95E-05 0.857 -250 126347 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IHSEILK [R].iHSEILk.[K] N-Term(TMT6plex); K7(TMT6plex) 2 Q9WUB3 "Glycogen phosphorylase, muscle form OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=3" E9PUM3; Q9WUB3 "Alpha-1,4 glucan phosphorylase OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=1; Glycogen phosphorylase, muscle form OS=Mus musculus OX=10090 GN=Pygm PE=1 SV=3" 0 3 3 0.0478 0 1 1 1 433.28 1297.82544 1297.82439 0.81 0.00035 0/0 0 0 18701768 HCD 30 MS2 40.77885 676.2 52.493 79.629 24774 24774 24766 QEplus033719.raw F4 759.3 295.2 570.1 911.8 475.4 1045.6 122 3.35 1 FALSE 0.004914 0.08604 0.045 -250 126357 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQAEAEVASLNR [R].eQAEAEVASLNR.[R] N-Term(TMT6plex) 4 Q8C7C3; Q58E70 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1;Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1 D3Z6I8; Q8C7C3; Q58E70; E9Q7Q3 Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tpm3 protein OS=Mus musculus OX=10090 GN=Tpm3 PE=2 SV=1; Tropomyosin alpha-3 chain OS=Mus musculus OX=10090 GN=Tpm3 PE=1 SV=1 0 2 2 0.1144 0 1 1 1 773.40778 1545.80828 1545.80702 0.81 0.00063 0/0 0 0 17260768 HCD 30 MS2 0 545.8 110 79.6315 24775 24775 24766 QEplus033719.raw F4 548 553.3 599.3 371.7 713.5 489.2 252 4.11 2 FALSE 1.14E-05 1.48E-07 1.395 -250 126364 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MEELHSQEMQK [R].mEELHSQEMQk.[R] N-Term(TMT6plex); K11(TMT6plex) 3 Q8VIJ6 "Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1" Q810V5; Q8VIJ6; Q7TMH7 "Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1; Splicing factor, proline- and glutamine-rich OS=Mus musculus OX=10090 GN=Sfpq PE=1 SV=1; Sfpq protein (Fragment) OS=Mus musculus OX=10090 GN=Sfpq PE=2 SV=1" 0 3 3 0.6536 0 1 1 1 616.65137 1847.93955 1847.93958 -0.01 -0.00001 0/0 0 0 12786614 HCD 30 MS2 40.4513 1124.4 110 79.634 24776 24776 24766 QEplus033719.raw F4 1116.1 1035.3 1189.2 867.8 1277.5 1260.5 244 4.85 1 FALSE 1.14E-05 2.00E-09 1.75 -250 126371 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQAVTLAQK [K].eQAVTLAQk.[M] N-Term(TMT6plex); K9(TMT6plex) 3 Q9Z2I9 "Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Sucla2 PE=1 SV=2" Q9Z2I9; Q3UCC6; Q3U6C7 "Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Sucla2 PE=1 SV=2; Succinate-CoA ligase subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Sucla2 PE=2 SV=1; Succinate-CoA ligase subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Sucla2 PE=2 SV=1" 0 2 2 0.5294 0 1 1 1 723.44019 1445.87309 1445.8728 0.2 0.00015 0/0 0 0 25275500 HCD 30 MS2 5.852502 831.3 110 79.6413 24778 24778 24777 QEplus033719.raw F4 884.3 489.9 824 1072.6 647.4 1069.8 448 3.91 1 FALSE 1.14E-05 1.18E-06 1.224 -250 126377 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LCFSTAQHAS [K].lcFSTAQHAS.[-] N-Term(TMT6plex); C2(Carbamidomethyl) 4 G5E924 Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 Q9CVU5; Q8R081; G3UY38; G5E924 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=2 SV=1; Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1; Heterogeneous nuclear ribonucleoprotein L (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=1 0 2 2 0.8208 0 1 1 1 675.83722 1350.66716 1350.66735 -0.14 -0.00009 0/0 0 0 11561353 HCD 30 MS2 38.55923 746.5 110 79.6438 24779 24779 24777 QEplus033719.raw F4 731.1 795.6 769.5 585.4 974.8 622.5 100 2.79 1 FALSE 0.001185 0.01624 0.318 -250 126382 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FLEQQNK [R].fLEQQNk.[LVAIM] N-Term(TMT6plex); K7(TMT6plex) 62 Q3TWV0; Q3UV17; Q3TFD9 "Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Keratin, type II cytoskeletal 2 oral OS=Mus musculus OX=10090 GN=Krt76 PE=1 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1" P78385; Q4L0E6; P03995; Q3KNV1; Q05B38; A4IF59; P12035; A0A0A6YWC8; Q9NSB2; Q61726; Q3TWV0; P03995-2; A2AKJ2; Q61726; O95678; A0A6B9SLG6; Q3U6S1; P02538; Q0VDM9; Q3UD36; Q5XKE5; Q6IMF0; E9Q1Z0; P50446; Q3UV11; Q9ERE2; Q99M73; P78386; Q8BGZ7; Q8VED5; Q5XQN5; P48668; P07744; Q6ISB0; P11679; P97861; Q9Z2T6; Q01546; O43790; Q3UAX1; H-INV:HIT000292931; P08729; Q148Q7; Q3V2S4; Q3UV17; Q8N1N4-2; Q9DCV7; Q8BIS2; Q0VDN0; Q0VDR7; A1L0X5; P04259; Q9Z331; Q14533; Q6IFT3; Q3TFD9; P05787; Q922U2; Q6NT21; Q5FWJ3; P13647; E9Q0F0 "SWISS-PROT:P78385 Keratin, type II cuticular Hb3 (Hair keratin, type II Hb3) - Homo sapiens (Human).; Type II cytokeratin Kb40 (Fragment) OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; Glial fibrillary acidic protein OS=Mus musculus OX=10090 GN=Gfap PE=1 SV=4; TREMBL:Q3KNV1;Q96GE1 Tax_Id=9606 Gene_Symbol=KRT7 keratin 7; Krt6b protein (Fragment) OS=Mus musculus OX=10090 GN=Krt6b PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:P12035 Tax_Id=9606 Gene_Symbol=KRT3 Keratin, type II cytoskeletal 3; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; SWISS-PROT:Q9NSB2 Keratin, type II cuticular Hb4 (Hair keratin, type II Hb4) - Homo sapiens (Human).; TREMBL:Q61726 Tax_Id=10090 Gene_Symbol=5430421N21Rik Keratin type II; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Isoform 2 of Glial fibrillary acidic protein OS=Mus musculus OX=10090 GN=Gfap; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Keratin type II (Fragment) OS=Mus musculus OX=10090 GN=Krt83 PE=2 SV=1; SWISS-PROT:O95678 Tax_Id=9606 Gene_Symbol=KRT75 Keratin, type II cytoskeletal 75; Keratin 75 splice variant OS=Mus musculus OX=10090 GN=Krt75 PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:P02538 Tax_Id=9606 Gene_Symbol=KRT6A Keratin, type II cytoskeletal 6A; Krt78 protein (Fragment) OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:Q5XKE5 Tax_Id=9606 Gene_Symbol=KRT79 Keratin, type II cytoskeletal 79; Keratin, type II cuticular 87 OS=Mus musculus OX=10090 GN=Krt87 PE=2 SV=2; Keratin 90 OS=Mus musculus OX=10090 GN=Krt90 PE=1 SV=1; SWISS-PROT:P50446 Tax_Id=10090 Gene_Symbol=Krt6a Keratin, type II cytoskeletal 6A; Keratin, type II cytoskeletal 6B OS=Mus musculus OX=10090 GN=Krt6b PE=1 SV=1; Keratin, type II cuticular Hb1 OS=Mus musculus OX=10090 GN=Krt81 PE=2 SV=2; Keratin, type II cuticular Hb4 OS=Mus musculus OX=10090 GN=Krt84 PE=2 SV=2; SWISS-PROT:P78386 Keratin, type II cuticular Hb5 (Hair keratin, type II Hb5) - Homo sapiens (Human).; TREMBL:Q8BGZ7;Q99MH7 Tax_Id=10090 Gene_Symbol=Krt75 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732475I03 product:CYTOKERATIN homolog; TREMBL:Q8VED5 Tax_Id=10090 Gene_Symbol=Krt79 Keratin 79; SWISS-PROT:Q5XQN5 (Bos taurus) Keratin, type II cytoskeletal 5; SWISS-PROT:P48668 Tax_Id=9606 Gene_Symbol=KRT6C Keratin, type II cytoskeletal 6C; SWISS-PROT:P07744 Tax_Id=10090 Gene_Symbol=Krt4 Keratin, type II cytoskeletal 4; TREMBL:Q6ISB0 Keratin, hair, basic, 4 - Homo sapiens (Human).; Keratin, type II cytoskeletal 8 OS=Mus musculus OX=10090 GN=Krt8 PE=1 SV=4; Keratin, type II cuticular Hb6 OS=Mus musculus OX=10090 GN=Krt86 PE=2 SV=2; Keratin, type II cuticular Hb5 OS=Mus musculus OX=10090 GN=Krt85 PE=1 SV=2; SWISS-PROT:Q01546 Tax_Id=9606 Gene_Symbol=KRT76 Keratin, type II cytoskeletal 2 oral; SWISS-PROT:O43790 Keratin, type II cuticular Hb6 (Hair keratin, type II Hb6) (ghHb6) - Homo sapiens (Human).; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Tax_Id=9606 Gene_Symbol=- Similar to Keratin, type II cytoskeletal 8; SWISS-PROT:P08729 Tax_Id=9606 Gene_Symbol=KRT7 Keratin, type II cytoskeletal 7; IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Krt90 PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Keratin, type II cytoskeletal 2 oral OS=Mus musculus OX=10090 GN=Krt76 PE=1 SV=1; SWISS-PROT:Q8N1N4-2 Tax_Id=9606 Gene_Symbol=KRT78 Isoform 2 of Keratin, type II cytoskeletal 78; SWISS-PROT:Q9DCV7 Tax_Id=10090 Gene_Symbol=Krt7 Keratin, type II cytoskeletal 7; IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Krt90 PE=2 SV=1; Krt78 protein (Fragment) OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; Krt6b protein OS=Mus musculus OX=10090 GN=Krt6b PE=2 SV=1; Krt78 protein (Fragment) OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; SWISS-PROT:P04259 Tax_Id=9606 Gene_Symbol=KRT6B Keratin, type II cytoskeletal 6B; Keratin, type II cytoskeletal 6B OS=Mus musculus OX=10090 GN=Krt6b PE=1 SV=3; SWISS-PROT:Q14533 Keratin, type II cuticular Hb1 (Hair keratin, type II Hb1) (ghHKb1) (ghHb1) (MLN 137) - Homo sapiens (Human).; Keratin Kb40 OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:P05787 Tax_Id=9606 Gene_Symbol=KRT8 Keratin, type II cytoskeletal 8; SWISS-PROT:Q922U2 Tax_Id=10090 Gene_Symbol=Krt5 Keratin, type II cytoskeletal 5; TREMBL:Q6NT21 Keratin, hair, basic, 3 - Homo sapiens (Human).; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; SWISS-PROT:P13647 Tax_Id=9606 Gene_Symbol=KRT5 Keratin, type II cytoskeletal 5; Keratin 78 OS=Mus musculus OX=10090 GN=Krt78 PE=1 SV=1" 0 2 2 0.2838 0 1 1 1 682.9007 1364.79411 1364.79382 0.22 0.00015 0/0 0 0 75831240 HCD 30 MS2 26.5127 1271.5 30.502 79.6461 24780 24780 24777 QEplus033719.raw F4 1423.7 1442.2 1380.9 792.9 1485.4 1103.7 458 2.22 3 TRUE 0.006134 0.1005 0.005 -250 126395 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FLEQQNK [R].fLEQQNk.[LVAIM] N-Term(TMT6plex); K7(TMT6plex) 62 Q3TWV0; Q3UV17; Q3TFD9 "Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Keratin, type II cytoskeletal 2 oral OS=Mus musculus OX=10090 GN=Krt76 PE=1 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1" P78385; Q4L0E6; P03995; Q3KNV1; Q05B38; A4IF59; P12035; A0A0A6YWC8; Q9NSB2; Q61726; Q3TWV0; P03995-2; A2AKJ2; Q61726; O95678; A0A6B9SLG6; Q3U6S1; P02538; Q0VDM9; Q3UD36; Q5XKE5; Q6IMF0; E9Q1Z0; P50446; Q3UV11; Q9ERE2; Q99M73; P78386; Q8BGZ7; Q8VED5; Q5XQN5; P48668; P07744; Q6ISB0; P11679; P97861; Q9Z2T6; Q01546; O43790; Q3UAX1; H-INV:HIT000292931; P08729; Q148Q7; Q3V2S4; Q3UV17; Q8N1N4-2; Q9DCV7; Q8BIS2; Q0VDN0; Q0VDR7; A1L0X5; P04259; Q9Z331; Q14533; Q6IFT3; Q3TFD9; P05787; Q922U2; Q6NT21; Q5FWJ3; P13647; E9Q0F0 "SWISS-PROT:P78385 Keratin, type II cuticular Hb3 (Hair keratin, type II Hb3) - Homo sapiens (Human).; Type II cytokeratin Kb40 (Fragment) OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; Glial fibrillary acidic protein OS=Mus musculus OX=10090 GN=Gfap PE=1 SV=4; TREMBL:Q3KNV1;Q96GE1 Tax_Id=9606 Gene_Symbol=KRT7 keratin 7; Krt6b protein (Fragment) OS=Mus musculus OX=10090 GN=Krt6b PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:P12035 Tax_Id=9606 Gene_Symbol=KRT3 Keratin, type II cytoskeletal 3; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; SWISS-PROT:Q9NSB2 Keratin, type II cuticular Hb4 (Hair keratin, type II Hb4) - Homo sapiens (Human).; TREMBL:Q61726 Tax_Id=10090 Gene_Symbol=5430421N21Rik Keratin type II; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Isoform 2 of Glial fibrillary acidic protein OS=Mus musculus OX=10090 GN=Gfap; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Keratin type II (Fragment) OS=Mus musculus OX=10090 GN=Krt83 PE=2 SV=1; SWISS-PROT:O95678 Tax_Id=9606 Gene_Symbol=KRT75 Keratin, type II cytoskeletal 75; Keratin 75 splice variant OS=Mus musculus OX=10090 GN=Krt75 PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:P02538 Tax_Id=9606 Gene_Symbol=KRT6A Keratin, type II cytoskeletal 6A; Krt78 protein (Fragment) OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:Q5XKE5 Tax_Id=9606 Gene_Symbol=KRT79 Keratin, type II cytoskeletal 79; Keratin, type II cuticular 87 OS=Mus musculus OX=10090 GN=Krt87 PE=2 SV=2; Keratin 90 OS=Mus musculus OX=10090 GN=Krt90 PE=1 SV=1; SWISS-PROT:P50446 Tax_Id=10090 Gene_Symbol=Krt6a Keratin, type II cytoskeletal 6A; Keratin, type II cytoskeletal 6B OS=Mus musculus OX=10090 GN=Krt6b PE=1 SV=1; Keratin, type II cuticular Hb1 OS=Mus musculus OX=10090 GN=Krt81 PE=2 SV=2; Keratin, type II cuticular Hb4 OS=Mus musculus OX=10090 GN=Krt84 PE=2 SV=2; SWISS-PROT:P78386 Keratin, type II cuticular Hb5 (Hair keratin, type II Hb5) - Homo sapiens (Human).; TREMBL:Q8BGZ7;Q99MH7 Tax_Id=10090 Gene_Symbol=Krt75 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732475I03 product:CYTOKERATIN homolog; TREMBL:Q8VED5 Tax_Id=10090 Gene_Symbol=Krt79 Keratin 79; SWISS-PROT:Q5XQN5 (Bos taurus) Keratin, type II cytoskeletal 5; SWISS-PROT:P48668 Tax_Id=9606 Gene_Symbol=KRT6C Keratin, type II cytoskeletal 6C; SWISS-PROT:P07744 Tax_Id=10090 Gene_Symbol=Krt4 Keratin, type II cytoskeletal 4; TREMBL:Q6ISB0 Keratin, hair, basic, 4 - Homo sapiens (Human).; Keratin, type II cytoskeletal 8 OS=Mus musculus OX=10090 GN=Krt8 PE=1 SV=4; Keratin, type II cuticular Hb6 OS=Mus musculus OX=10090 GN=Krt86 PE=2 SV=2; Keratin, type II cuticular Hb5 OS=Mus musculus OX=10090 GN=Krt85 PE=1 SV=2; SWISS-PROT:Q01546 Tax_Id=9606 Gene_Symbol=KRT76 Keratin, type II cytoskeletal 2 oral; SWISS-PROT:O43790 Keratin, type II cuticular Hb6 (Hair keratin, type II Hb6) (ghHb6) - Homo sapiens (Human).; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Tax_Id=9606 Gene_Symbol=- Similar to Keratin, type II cytoskeletal 8; SWISS-PROT:P08729 Tax_Id=9606 Gene_Symbol=KRT7 Keratin, type II cytoskeletal 7; IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Krt90 PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Keratin, type II cytoskeletal 2 oral OS=Mus musculus OX=10090 GN=Krt76 PE=1 SV=1; SWISS-PROT:Q8N1N4-2 Tax_Id=9606 Gene_Symbol=KRT78 Isoform 2 of Keratin, type II cytoskeletal 78; SWISS-PROT:Q9DCV7 Tax_Id=10090 Gene_Symbol=Krt7 Keratin, type II cytoskeletal 7; IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Krt90 PE=2 SV=1; Krt78 protein (Fragment) OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; Krt6b protein OS=Mus musculus OX=10090 GN=Krt6b PE=2 SV=1; Krt78 protein (Fragment) OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; SWISS-PROT:P04259 Tax_Id=9606 Gene_Symbol=KRT6B Keratin, type II cytoskeletal 6B; Keratin, type II cytoskeletal 6B OS=Mus musculus OX=10090 GN=Krt6b PE=1 SV=3; SWISS-PROT:Q14533 Keratin, type II cuticular Hb1 (Hair keratin, type II Hb1) (ghHKb1) (ghHb1) (MLN 137) - Homo sapiens (Human).; Keratin Kb40 OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:P05787 Tax_Id=9606 Gene_Symbol=KRT8 Keratin, type II cytoskeletal 8; SWISS-PROT:Q922U2 Tax_Id=10090 Gene_Symbol=Krt5 Keratin, type II cytoskeletal 5; TREMBL:Q6NT21 Keratin, hair, basic, 3 - Homo sapiens (Human).; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; SWISS-PROT:P13647 Tax_Id=9606 Gene_Symbol=KRT5 Keratin, type II cytoskeletal 5; Keratin 78 OS=Mus musculus OX=10090 GN=Krt78 PE=1 SV=1" 0 3 3 0.3478 0 1 1 1 455.60281 1364.79389 1364.79382 0.05 0.00002 0/0 0 0 26901718 HCD 30 MS2 20.42661 702.8 45.025 79.6506 24782 24782 24777 QEplus033719.raw F4 781.2 651.6 706.2 543.4 764.9 769.3 448 2.3 3 TRUE 0.00736 0.1182 -0.038 -250 126410 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DISTLNSGKK [R].dISTLNSGkk.[S] N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex) 5 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q99LY0; Q91YQ5; Q5RKP4; Q3U900; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 1 3 3 0.4894 0 1 1 1 584.02734 1750.06748 1750.06776 -0.16 -0.00009 0/0 0 0 22922396 HCD 30 MS2 18.03928 1530.6 90.332 79.6552 24784 24784 24777 QEplus033719.raw F4 1580.3 1391.7 1713.2 1228.4 1687.3 1582.6 357 2.84 1 FALSE 1.14E-05 1.74E-06 1.192 -250 126419 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HMGLFDHAAK [R].hMGLFDHAAk.[I] N-Term(TMT6plex); K10(TMT6plex) 3 A0A1L1STE6 "Isocitrate dehydrogenase [NAD] subunit, mitochondrial OS=Mus musculus OX=10090 GN=Idh3a PE=1 SV=1" A0A1L1STE6; Q9D6R2-2; Q9D6R2 "Isocitrate dehydrogenase [NAD] subunit, mitochondrial OS=Mus musculus OX=10090 GN=Idh3a PE=1 SV=1; Isoform 2 of Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Idh3a; Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Idh3a PE=1 SV=1" 0 4 4 0.7327 0 1 1 1 396.9736 1584.87258 1584.87209 0.31 0.00012 0/0 0 0 21811048 HCD 30 MS2 41.83264 429.3 34.992 79.6574 24785 24785 24777 QEplus033719.raw F4 402.2 340.6 513.1 380.5 395.4 544.2 346 4.34 1 FALSE 1.14E-05 9.31E-07 1.243 -250 126427 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVLSQASK [K].vVLSQASk.[L] N-Term(TMT6plex); K8(TMT6plex) 6 Q3UPL0 Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2 Q3UPL0; Q3UPL0-2; S4R2A9; S4R1T5; Q9CVL3; Q3UPL0-3 Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=2; Isoform 2 of Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a; Protein transport protein Sec31A (Fragment) OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=1; Protein transport protein Sec31A (Fragment) OS=Mus musculus OX=10090 GN=Sec31a PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sec31a PE=2 SV=1; Isoform 3 of Protein transport protein Sec31A OS=Mus musculus OX=10090 GN=Sec31a 0 2 2 0.5791 0 1 1 1 645.41388 1289.82048 1289.81931 0.91 0.00059 0/0 0 0 18323550 HCD 30 MS2 41.78306 1080 110 79.6599 24786 24786 24777 QEplus033719.raw F4 1091.7 972.7 1159.2 808.1 1285.8 1162.3 228 3.35 1 FALSE 1.14E-05 0.0001767 0.81 -250 126437 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDVTEQTGLSGR [K].vDVTEQTGLSGR.[F] N-Term(TMT6plex) 2 Q8VBT0 Thioredoxin-related transmembrane protein 1 OS=Mus musculus OX=10090 GN=Tmx1 PE=1 SV=1 F6V084; Q8VBT0 Thioredoxin-related transmembrane protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Tmx1 PE=1 SV=1; Thioredoxin-related transmembrane protein 1 OS=Mus musculus OX=10090 GN=Tmx1 PE=1 SV=1 0 2 2 0.7044 0 1 1 1 745.90454 1490.80181 1490.8012 0.4 0.0003 0/0 0 0 12123071 HCD 30 MS2 55.89079 775 110 79.6624 24787 24787 24777 QEplus033719.raw F4 1265.6 416.5 548.7 1229.8 553.2 635.9 343 2.74 1 FALSE 1.14E-05 1.21E-07 1.412 -250 126443 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLGIGK [K].nLGIGk.[I] N-Term(TMT6plex); K6(TMT6plex) 1 P08249 "Malate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Mdh2 PE=1 SV=3" P08249 "Malate dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Mdh2 PE=1 SV=3" 0 2 2 0.1075 0 1 1 1 530.3504 1059.69353 1059.69265 0.83 0.00044 0/0 0 0 109392272 HCD 30 MS2 27.69633 978.2 10.677 79.6697 24789 24789 24788 QEplus033719.raw F4 1005.3 709.8 984.9 1041.6 994.7 1133.2 77 1.86 1 FALSE 0.008298 0.1432 -0.079 -250 126460 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FTLRDEGK [R].fTLRDEGk.[T] N-Term(TMT6plex); K8(TMT6plex) 7 Q8CCV1 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Gspt1 PE=2 SV=1 Q8CCV1; Q3UL02; Q8BPH0; Q8R050; F7CE88; Q149F3; Q8R050-2 Tr-type G domain-containing protein OS=Mus musculus OX=10090 GN=Gspt1 PE=2 SV=1; Tr-type G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gspt1 PE=2 SV=1; Tr-type G domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Gspt1 PE=2 SV=1; Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus OX=10090 GN=Gspt1 PE=1 SV=2; Eukaryotic peptide chain release factor GTP-binding subunit ERF3A (Fragment) OS=Mus musculus OX=10090 GN=Gspt1 PE=4 SV=1; Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Mus musculus OX=10090 GN=Gspt2 PE=1 SV=1; Isoform 2 of Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus OX=10090 GN=Gspt1 1 3 3 0.4344 0 1 1 1 475.28238 1423.83258 1423.83094 1.16 0.00055 0/0 0 0 63819844 HCD 30 MS2 18.09802 940 27.826 79.6745 24791 24791 24788 QEplus033719.raw F4 879.6 793.3 1062.6 762.8 1077.4 1064.6 355 2.21 1 FALSE 0.0036 0.06898 0.09 -250 126478 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQELSAEER [K].lQELSAEER.[Q] N-Term(TMT6plex) 2 Q3TJF2 Obg-like ATPase 1 OS=Mus musculus OX=10090 GN=Ola1 PE=2 SV=1 Q3TJF2; Q9CZ30 Obg-like ATPase 1 OS=Mus musculus OX=10090 GN=Ola1 PE=2 SV=1; Obg-like ATPase 1 OS=Mus musculus OX=10090 GN=Ola1 PE=1 SV=1 0 2 2 0.4241 0 1 1 1 652.35693 1303.70659 1303.70551 0.83 0.00054 0/0 0 0 27399060 HCD 30 MS2 37.27007 924.4 49.733 79.6791 24793 24793 24788 QEplus033719.raw F4 937.7 696.1 1036.7 894.6 885.9 1095.3 291 3.49 1 FALSE 1.14E-05 1.57E-05 1.01 -250 126485 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MSIATTK [R].mSIATTk.[D] N-Term(TMT6plex); K7(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.5078 0 1 1 1 605.36865 1209.73003 1209.72772 1.91 0.00116 0/0 0 0 21888616 HCD 30 MS2 44.78535 1573.4 75.172 79.6836 24795 24795 24788 QEplus033719.raw F4 1645.9 858.6 1450.3 2071.1 1050.1 2364.6 299 2.56 2 FALSE 0.0004191 0.007454 0.449 -250 126492 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETGVDLTK [R].eTGVDLTk.[D] N-Term(TMT6plex); K8(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 0 2 2 0.4286 0 1 1 1 660.89288 1320.77849 1320.7775 0.75 0.00049 0/0 0 0 20175712 HCD 30 MS2 0 1240.5 110 79.6861 24796 24796 24788 QEplus033719.raw F4 1341.8 1046.9 1400.2 1206.2 1099.9 1347.9 355 3.22 1 FALSE 1.14E-05 0.0002722 0.774 -250 126500 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LYDQHLGK [K].lYDQHLGk.[S] N-Term(TMT6plex); K8(TMT6plex) 5 P13541; P13542 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; P13541; Q5DTH2; B1AR69; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; MKIAA4211 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.5976 0 1 1 1 716.42615 1431.84502 1431.83602 6.28 0.0045 0/0 0 0 16288350 HCD 30 MS2 8.917369 1006.1 110 79.6886 24797 24797 24788 QEplus033719.raw F4 1191.1 319.8 835.3 1852.6 379 1459.1 503 3.38 2 FALSE 1.14E-05 9.52E-05 0.861 -250 126510 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMLASCSSLR [K].eMLAScSSLR.[S] N-Term(TMT6plex); C6(Carbamidomethyl) 4 Q8BMJ2 "Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2" Q6ZPT2; A0A494BBF9; Q8BMJ2; Q99JK2 "Leucyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1; Leucyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Lars PE=1 SV=1; Leucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Lars1 PE=1 SV=2; Lars protein OS=Mus musculus OX=10090 GN=Lars PE=2 SV=1" 0 2 2 0.5897 0 1 1 1 691.85272 1382.69817 1382.69694 0.89 0.00062 0/0 0 0 16140281 HCD 30 MS2 32.44904 938 110 79.6911 24798 24798 24788 QEplus033719.raw F4 966 799.4 1017.2 843.4 967.6 1034.5 161 3.12 1 FALSE 1.14E-05 0.000832 0.678 -250 126526 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAFSVAR [R].vAFSVAR.[A] N-Term(TMT6plex) 7 Q3UB67 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1 Q3UB67; Q3UB15; Q3UB90; Q3U9L3; Q3T9U9; P27659; A0A2R8VHN4 Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl3 PE=2 SV=1; 60S ribosomal protein L3 OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=3; 60S ribosomal protein L3 (Fragment) OS=Mus musculus OX=10090 GN=Rpl3 PE=1 SV=1 0 2 2 0.2017 0 1 1 1 489.80078 978.59429 978.59338 0.92 0.00045 0/0 0 0 189313616 HCD 30 MS2 27.8583 774.6 4.369 79.7032 24802 24802 24799 QEplus033719.raw F4 845.1 598.8 794.7 614.3 986.6 808.4 79 2.38 1 FALSE 0.001169 0.01567 0.325 -250 126543 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKPGAPLRPK [K].lkPGAPLRPk.[L] N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; B7FAV1; F6XC15; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 4 4 0.6695 0 1 1 1 441.80167 1764.18484 1764.18267 1.23 0.00054 0/0 0 0 59693068 HCD 30 MS2 14.21765 802.7 26.686 79.7077 24804 24804 24799 QEplus033719.raw F4 765.6 904.9 955.4 482 993.2 715 48 3.51 1 FALSE 0.005131 0.08816 0.039 -250 126560 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSMLSPK [R].tSMLSPk.[S] N-Term(TMT6plex); K7(TMT6plex) 5 Q3TRJ1 Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=1 SV=1 Q3TRJ1; Q3TUV7; Q3UQJ1; Q3TKU6; Q3TJ43 Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1; Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1; Vacuolar protein sorting-associated protein 35 OS=Mus musculus OX=10090 GN=Vps35 PE=2 SV=1 0 2 2 0.2806 0 1 1 1 611.36725 1221.72722 1221.72772 -0.41 -0.00025 0/0 0 0 23843238 HCD 30 MS2 21.2245 1361.2 74.897 79.7122 24806 24806 24799 QEplus033719.raw F4 1435.5 1099 1567.3 1163.9 1428 1473.5 454 2.53 1 FALSE 0.00079 0.01107 0.387 -250 126568 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FMSAYEQR [R].fMSAYEQR.[I] N-Term(TMT6plex) 3 G3UVU2 Splicing factor 3A subunit 2 OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=1 D3YW09; G3UVU2; Q62203 Splicing factor 3A subunit 2 OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=1; Splicing factor 3A subunit 2 OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=1; Splicing factor 3A subunit 2 OS=Mus musculus OX=10090 GN=Sf3a2 PE=1 SV=2 0 2 2 0.6024 0 1 1 1 630.8161 1260.62493 1260.62442 0.4 0.00025 0/0 0 0 22475928 HCD 30 MS2 11.05801 1018.3 110 79.7148 24807 24807 24799 QEplus033719.raw F4 892.3 961.5 1139.2 817.2 1216.9 1082.9 78 2.49 1 FALSE 0.001248 0.0169 0.311 -250 126573 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQLAALRK [K].eQLAALRk.[H] N-Term(TMT6plex); K8(TMT6plex) 2 E9PV44 ATP synthase F1 subunit epsilon OS=Mus musculus OX=10090 GN=Atpif1 PE=1 SV=1 E9PV44; O35143 "ATP synthase F1 subunit epsilon OS=Mus musculus OX=10090 GN=Atpif1 PE=1 SV=1; ATPase inhibitor, mitochondrial OS=Mus musculus OX=10090 GN=Atp5if1 PE=1 SV=2" 1 3 3 0.4338 0 1 1 1 462.96637 1386.88456 1386.88331 0.9 0.00042 0/0 0 0 21518582 HCD 30 MS2 35.14581 1251.9 67.07 79.717 24808 24808 24799 QEplus033719.raw F4 1374.3 1168.5 1399.3 979.4 1369.2 1220.5 361 3.25 1 FALSE 1.14E-05 0.0007855 0.683 -250 126578 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MTPAYEIR [K].mTPAYEIR.[A] N-Term(TMT6plex) 7 E9QNN1 DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1 O70133-2; Q05BR6; Q3UR42; E9QNN1; A0A0R4J2C3; A0A087WPL5; O70133 Isoform 2 of ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9; Dhx9 protein (Fragment) OS=Mus musculus OX=10090 GN=Dhx9 PE=2 SV=1; DEAH box protein 9 (Fragment) OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; RNA helicase OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; DEAH box protein 9 OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=1; ATP-dependent RNA helicase A OS=Mus musculus OX=10090 GN=Dhx9 PE=1 SV=2 0 2 2 0.4676 0 1 1 1 605.32916 1209.65105 1209.64991 0.94 0.00057 0/0 0 0 21246302 HCD 30 MS2 53.73973 970.2 43.532 79.7193 24809 24809 24799 QEplus033719.raw F4 958.1 659.4 968.5 1159.3 749.8 1326.2 229 2.78 1 FALSE 0.002056 0.03682 0.186 -250 126593 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IWAHEALR [R].iWAHEALR.[L] N-Term(TMT6plex) 2 Q9JHU4 Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 Q80U36; Q9JHU4 MKIAA0325 protein (Fragment) OS=Mus musculus OX=10090 GN=Dync1h1 PE=2 SV=1; Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2 0 3 3 0.5128 0 1 1 1 408.90662 1224.7053 1224.70506 0.19 0.00008 0/0 0 0 11977768 HCD 30 MS2 37.89678 394 43.374 79.7288 24812 24812 24810 QEplus033719.raw F4 432.2 251.1 435.8 276.3 406.7 561.8 295 3.51 1 FALSE 3.35E-05 0.00125 0.642 -250 126613 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAEPYGK [K].lAEPYGk.[I] N-Term(TMT6plex); K7(TMT6plex) 9 Q6ZQ61 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1 Q6ZQ61; Q4FJT0; A0A494B9X1; Q3TTX0; A0A494BAZ7; Q3UFN8; A0A494BAD4; Q3TZN1; Q5BL18 MKIAA0723 protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matr3 protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Small nucleolar RNA host gene 4 (Fragment) OS=Mus musculus OX=10090 GN=Snhg4 PE=4 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin-3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin-3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Matr3 PE=2 SV=1; Matrin 3 OS=Mus musculus OX=10090 GN=Matr3 PE=1 SV=1 0 2 2 0.4167 0 1 1 1 618.37323 1235.73918 1235.73999 -0.66 -0.00041 0/0 0 0 30805472 HCD 30 MS2 26.74723 1300 46.086 79.7334 24814 24814 24810 QEplus033719.raw F4 1293.4 1177.7 1501.6 1076.6 1363.9 1386.8 315 2.52 1 FALSE 0.001108 0.01439 0.34 -250 126623 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YTCSFCGK [K].yTcSFcGk.[T] N-Term(TMT6plex); C3(Carbamidomethyl); C6(Carbamidomethyl); K8(TMT6plex) 6 Q5M9N6 Rpl37a protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1 Q5M9N6; Q4VAF2; Q9CYW3; A0A1D5RL86; Q3U8M3; Q3TLC1 Rpl37a protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1; Ribosomal protein L37a OS=Mus musculus OX=10090 GN=Rpl37a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1; 60S ribosomal protein L37a (Fragment) OS=Mus musculus OX=10090 GN=Rpl37a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1 0 2 2 0.6276 0 1 1 1 740.87054 1480.73381 1480.73288 0.63 0.00047 0/0 0 0 30395378 HCD 30 MS2 18.4359 977.3 69.246 79.7356 24815 24815 24810 QEplus033719.raw F4 1032.9 828.5 1061.2 949.9 976 1015.1 160 2.9 1 FALSE 0.002552 0.05015 0.142 -250 126630 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VINEEYK [R].vINEEYk.[I] N-Term(TMT6plex); K7(TMT6plex) 7 Q8C5H3; Q60972 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Rbbp7 PE=2 SV=1;Histone-binding protein RBBP4 OS=Mus musculus OX=10090 GN=Rbbp4 PE=1 SV=5 Q8C5H3; Q3UJI2; Q60973; A2AFJ1; A2AFI9; Q60972; F6ZLC6 WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Rbbp7 PE=2 SV=1; WD_REPEATS_REGION domain-containing protein OS=Mus musculus OX=10090 GN=Rbbp7 PE=2 SV=1; Histone-binding protein RBBP7 OS=Mus musculus OX=10090 GN=Rbbp7 PE=1 SV=1; Histone-binding protein RBBP7 OS=Mus musculus OX=10090 GN=Rbbp7 PE=1 SV=1; Histone-binding protein RBBP7 OS=Mus musculus OX=10090 GN=Rbbp7 PE=1 SV=1; Histone-binding protein RBBP4 OS=Mus musculus OX=10090 GN=Rbbp4 PE=1 SV=5; Histone-binding protein RBBP7 (Fragment) OS=Mus musculus OX=10090 GN=Rbbp7 PE=1 SV=8 0 2 2 0.4291 0 1 1 1 676.89496 1352.78264 1352.78259 0.04 0.00003 0/0 0 0 25530116 HCD 30 MS2 37.75531 1151.3 70.638 79.7379 24816 24816 24810 QEplus033719.raw F4 1170.9 1217.6 1223.4 754.3 1538.9 1002.9 339 2.89 2 FALSE 0.001464 0.02117 0.271 -250 126643 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQSLQEELAR [R].dQSLQEELAR.[Q] N-Term(TMT6plex) 3 Q9JI91 Alpha-actinin-2 OS=Mus musculus OX=10090 GN=Actn2 PE=1 SV=2 Q5FW75; Q9JI91; Q8K3Q4 Actinin alpha 2 OS=Mus musculus OX=10090 GN=Actn2 PE=2 SV=1; Alpha-actinin-2 OS=Mus musculus OX=10090 GN=Actn2 PE=1 SV=2; Actinin alpha 2 OS=Mus musculus OX=10090 GN=Actn2 PE=2 SV=1 0 2 2 0.5866 0 1 1 1 709.37708 1417.74687 1417.74844 -1.1 -0.00078 0/0 0 0 12980559 HCD 30 MS2 58.12475 981 110 79.7429 24818 24818 24810 QEplus033719.raw F4 995.4 540.8 983.7 1244.8 619.2 1502.2 286 3.29 1 FALSE 1.14E-05 2.45E-07 1.353 -250 126651 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LDASESLRK [K].lDASESLRk.[E] N-Term(TMT6plex); K9(TMT6plex) 6 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 F6Z1R4; Q80U89; Q68FD5; Q5SXR6; Q3TJ98; Q8K2I5 Clathrin heavy chain 1 (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1; Cltc protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1 1 3 3 0.3556 0 1 1 1 492.96469 1476.87952 1476.87861 0.61 0.0003 0/0 0 0 6711988.5 HCD 30 MS2 26.59509 798 110 79.7454 24819 24819 24810 QEplus033719.raw F4 837.7 528.4 824.4 642.8 931.1 1023.3 394 3.15 1 FALSE 1.14E-05 0.000578 0.71 -250 126660 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYEAEGIAK [R].dYEAEGIAk.[D] N-Term(TMT6plex); K9(TMT6plex) 2 Q3ULD5 "Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Mus musculus OX=10090 GN=Mccc2 PE=1 SV=1" Q3ULD5; Q6PD20 "Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Mus musculus OX=10090 GN=Mccc2 PE=1 SV=1; Mccc2 protein (Fragment) OS=Mus musculus OX=10090 GN=Mccc2 PE=1 SV=1" 0 2 2 0.5611 0 1 1 1 727.39996 1453.79265 1453.79388 -0.85 -0.00062 0/0 0 0 6308707.5 HCD 30 MS2 13.01514 427.2 110 79.748 24820 24820 24810 QEplus033719.raw F4 425.6 367.8 499.7 427.9 355.3 486.8 295 4.01 1 FALSE 1.14E-05 5.80E-07 1.282 -250 126685 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EMFNYAR [R].eMFNYAR.[D] N-Term(TMT6plex) 2 P62334 26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=1 Q8QZS9; P62334 Psmc6 protein (Fragment) OS=Mus musculus OX=10090 GN=Psmc6 PE=2 SV=1; 26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=1 0 2 2 0.567 0 1 1 1 580.29211 1159.57695 1159.57675 0.18 0.0001 0/0 0 0 15297521 HCD 30 MS2 46.60141 1315.1 91.82 79.7623 24825 24825 24821 QEplus033719.raw F4 1314.8 1084.4 1497.8 1169.2 1357.4 1467.2 71 2.24 1 FALSE 0.001938 0.03322 0.201 -250 126703 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KDDESNLVEEK [K].kDDESNLVEEk.[S] N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex) 13 Q5UE59 Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1 Q7M6Z7; Q7M701; Q7M700; Q5UE59; Q7M703; Q8CD76; A0A5F8MPZ2; Q7M6Z8; Q7M6Z6; Q7M6Z9; E9Q7C9; Q7M702; Q7TNF4 Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain (Fragment) OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=2 SV=1; Kinesin light chain OS=Mus musculus OX=10090 GN=Klc1 PE=1 SV=1 1 3 3 0.684 0 1 1 1 665.04071 1993.10758 1993.10566 0.96 0.00064 0/0 0 0 21106422 HCD 30 MS2 54.0362 971.9 66.16 79.7696 24828 24828 24821 QEplus033719.raw F4 1043.8 915.1 935.6 727.2 1267.7 941.9 466 4.05 1 FALSE 1.14E-05 2.83E-12 2.291 -250 126726 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ELQCLTPR [R].eLQcLTPR.[G] N-Term(TMT6plex); C4(Carbamidomethyl) 4 Q08943 FACT complex subunit SSRP1 OS=Mus musculus OX=10090 GN=Ssrp1 PE=1 SV=2 Q08943-2; Q08943; Q05DR5; A2AW05 Isoform 2 of FACT complex subunit SSRP1 OS=Mus musculus OX=10090 GN=Ssrp1; FACT complex subunit SSRP1 OS=Mus musculus OX=10090 GN=Ssrp1 PE=1 SV=2; FACT complex subunit SSRP1 (Fragment) OS=Mus musculus OX=10090 GN=Ssrp1 PE=2 SV=1; FACT complex subunit SSRP1 (Fragment) OS=Mus musculus OX=10090 GN=Ssrp1 PE=1 SV=1 0 2 2 0.49 0 1 1 1 623.34595 1245.68462 1245.68227 1.88 0.00117 0/0 0 0 10495906 HCD 30 MS2 52.75004 1177.7 110 79.7771 24831 24831 24821 QEplus033719.raw F4 1212.4 1008.1 1276.9 937.6 1344.1 1286.8 332 2.51 1 FALSE 0.0003408 0.006471 0.469 -250 126734 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEAMTNSK [R].kLEAMTNSk.[Q] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 1 3 3 0.6057 0 1 1 1 570.34686 1709.02604 1709.02345 1.51 0.00086 0/0 0 0 9908048 HCD 30 MS2 41.49685 1029.6 110 79.7844 24833 24833 24832 QEplus033719.raw F4 1009.2 746.3 1065.1 956 1108.6 1292.5 348 4.21 1 FALSE 1.14E-05 4.67E-08 1.49 -250 126741 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNWEALK [K].rNWEALk.[N] N-Term(TMT6plex); K7(TMT6plex) 4 A0A6Q6PUT5 Pre-mRNA-processing factor 40 homolog A (Fragment) OS=Mus musculus OX=10090 GN=Prpf40a PE=1 SV=1 A0A6Q6PUT5; Q9R1C7-2; A0A1B0GRU8; Q9R1C7 Pre-mRNA-processing factor 40 homolog A (Fragment) OS=Mus musculus OX=10090 GN=Prpf40a PE=1 SV=1; Isoform 2 of Pre-mRNA-processing factor 40 homolog A OS=Mus musculus OX=10090 GN=Prpf40a; Pre-mRNA-processing factor 40 homolog A OS=Mus musculus OX=10090 GN=Prpf40a PE=1 SV=1; Pre-mRNA-processing factor 40 homolog A OS=Mus musculus OX=10090 GN=Prpf40a PE=1 SV=1 1 3 3 0.2357 0 1 1 1 458.94775 1374.82871 1374.82579 2.12 0.00097 0/0 0 0 21166752 HCD 30 MS2 29.68803 1136.5 106.867 79.7868 24834 24834 24832 QEplus033719.raw F4 1190.3 961.9 1294 919.9 1106.3 1346.6 492 2.97 1 FALSE 0.002233 0.04332 0.163 -250 126747 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ADWSSLSR [K].aDWSSLSR.[DA] N-Term(TMT6plex) 3 P19783 "Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Mus musculus OX=10090 GN=Cox4i1 PE=1 SV=2" P19783; D6RG40; M0QWX7 "Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Mus musculus OX=10090 GN=Cox4i1 PE=1 SV=2; Choline kinase alpha OS=Mus musculus OX=10090 GN=Chka PE=4 SV=1; Cytochrome c oxidase subunit 4 (Fragment) OS=Mus musculus OX=10090 GN=Cox4i1 PE=1 SV=1" 0 2 2 0.498 0 1 1 1 575.8067 1150.60613 1150.6054 0.63 0.00036 0/0 0 0 81754264 HCD 30 MS2 22.39956 701 17.883 79.7914 24836 24836 24832 QEplus033719.raw F4 671.4 529.8 760.5 773.8 618.7 851.7 212 2.49 1 FALSE 0.001108 0.0144 0.34 -250 126765 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TVTIVVR [K].tVTIVVR.[G] N-Term(TMT6plex) 4 P80315 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3 P80315; Q3TII0; Q3UJZ8; G5E839 T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=3; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=2 SV=1; T-complex protein 1 subunit delta OS=Mus musculus OX=10090 GN=Cct4 PE=1 SV=1 0 2 2 0.2913 0 1 1 1 508.83521 1016.66313 1016.66655 -3.36 -0.00171 0/0 0 0 24440366 HCD 30 MS2 10.24709 1103.6 36.447 79.7959 24838 24838 24832 QEplus033719.raw F4 1217.5 872.2 1235 880.5 1168.5 1248.1 26 2.3 1 FALSE 0.002049 0.03632 0.188 -250 126775 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YTCSFCGK [K].yTcSFcGk.[T] N-Term(TMT6plex); C3(Carbamidomethyl); C6(Carbamidomethyl); K8(TMT6plex) 6 Q5M9N6 Rpl37a protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1 Q5M9N6; Q4VAF2; Q9CYW3; A0A1D5RL86; Q3U8M3; Q3TLC1 Rpl37a protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1; Ribosomal protein L37a OS=Mus musculus OX=10090 GN=Rpl37a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1; 60S ribosomal protein L37a (Fragment) OS=Mus musculus OX=10090 GN=Rpl37a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rpl37a PE=2 SV=1 0 3 3 0.6078 0 1 1 1 494.24918 1480.73297 1480.73288 0.07 0.00003 0/0 0 0 10750747 HCD 30 MS2 34.44947 1134.8 91.663 79.7982 24839 24839 24832 QEplus033719.raw F4 1148.9 1067 1264 842.4 1313.3 1173.2 150 2.83 1 FALSE 0.002123 0.03982 0.175 -250 126780 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NLSGQPNFPCR [R].nLSGQPNFPcR.[V] N-Term(TMT6plex); C10(Carbamidomethyl) 4 Q9ET30 Transmembrane 9 superfamily member 3 OS=Mus musculus OX=10090 GN=Tm9sf3 PE=1 SV=1 Q3UH23; Q9ET30; A0A498WGK6; Q571B0 Transmembrane 9 superfamily member OS=Mus musculus OX=10090 GN=Tm9sf3 PE=2 SV=1; Transmembrane 9 superfamily member 3 OS=Mus musculus OX=10090 GN=Tm9sf3 PE=1 SV=1; Transmembrane 9 superfamily member OS=Mus musculus OX=10090 GN=Tm9sf3 PE=1 SV=1; Transmembrane 9 superfamily member (Fragment) OS=Mus musculus OX=10090 GN=Tm9sf3 PE=2 SV=1 0 2 2 0.7105 0 1 1 1 759.88837 1518.76946 1518.76846 0.65 0.0005 0/0 0 0 9072086 HCD 30 MS2 8.982647 368.9 110 79.8007 24840 24840 24832 QEplus033719.raw F4 349.8 310 408 326.9 385.3 433.5 173 3.73 1 FALSE 1.14E-05 1.09E-07 1.42 -250 126797 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FIEQEK [R].fIEQEk.[A] N-Term(TMT6plex); K6(TMT6plex) 24 Q9QXS1-3; Q9QXS1 Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec;Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3 Q9QXS1-6; Q9QXS1-13; Q9QXS1-7; Q6S390; Q9QXS1-9; Q9QXS1-5; Q9QXS1-14; Q9QXS1-12; Q9QXS1-3; Q9QXS1-2; Q9QXS1-10; E9Q3W4; Q6S388; A0A3B2W7J8; Q6S385; Q6S392; Q9QXS1-15; Q6S387; Q9QXS1-11; Q9QXS1-16; Q9QXS1-4; Q9QXS1; Q9QXS1-8; Q6S393 "Isoform PLEC-0,1C of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1F of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-0,1C,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 4 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1D,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1G of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1E of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1 of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1D of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 7 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin (Fragment) OS=Mus musculus OX=10090 GN=Plec PE=1 SV=1; Plectin 10 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Plectin 3 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1H of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 8 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1; Isoform PLEC-1E,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1I of Plectin OS=Mus musculus OX=10090 GN=Plec; Isoform PLEC-1B,2A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin OS=Mus musculus OX=10090 GN=Plec PE=1 SV=3; Isoform PLEC-0,1C,2A,3A of Plectin OS=Mus musculus OX=10090 GN=Plec; Plectin 2 OS=Mus musculus OX=10090 GN=Plec PE=2 SV=1" 0 2 2 0.2227 0 1 1 1 626.37195 1251.73662 1251.73491 1.37 0.00086 0/0 0 0 18652992 HCD 30 MS2 10.2718 1334.1 110 79.813 24844 24844 24843 QEplus033719.raw F4 1290.3 1054.6 1478.1 1199.9 1429.9 1551.7 401 2.38 2 FALSE 0.003575 0.06847 0.092 -250 126805 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TYIPPKGETK [K].tYIPPkGETk.[K] N-Term(TMT6plex); K6(TMT6plex); K10(TMT6plex) 12 Q8BNM0 High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 Q8BQ02; Q8BNM0; Q6P202; Q58EV5; Q3UJK0; Q8C7C4; D3YZ18; D3YVC6; Q3UBK2; A0A0J9YUZ4; A0A0J9YUD8; Q497Z6 High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=8; High mobility group protein B1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1; High mobility group protein 1 (Fragment) OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein B1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=1 SV=1; High mobility group protein 1 OS=Mus musculus OX=10090 GN=Hmgb1 PE=2 SV=1 1 3 3 0.4464 0 1 1 1 607.70795 1821.10929 1821.1089 0.21 0.00013 0/0 0 0 17672458 HCD 30 MS2 9.061992 1054.9 110 79.8155 24845 24845 24843 QEplus033719.raw F4 1019 1199.7 1133 728.7 1280.7 968.3 313 2.8 1 FALSE 1.14E-05 0.0001469 0.825 -250 126813 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGLEMEK [K].dGLEMEk.[C] N-Term(TMT6plex); K7(TMT6plex) 2 P63028 Translationally-controlled tumor protein OS=Mus musculus OX=10090 GN=Tpt1 PE=1 SV=1 D3YU75; P63028 Translationally-controlled tumor protein OS=Mus musculus OX=10090 GN=Tpt1 PE=1 SV=1; Translationally-controlled tumor protein OS=Mus musculus OX=10090 GN=Tpt1 PE=1 SV=1 0 2 2 0.4981 0 1 1 1 640.35236 1279.69744 1279.69681 0.49 0.00031 0/0 0 0 56825136 HCD 30 MS2 44.29238 1269.1 25.266 79.8178 24846 24846 24843 QEplus033719.raw F4 1391 891.7 1354.9 1189 1326.6 1461.4 364 2.69 1 FALSE 0.00079 0.01091 0.39 -250 126817 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VSDYEMK [K].vSDYEMk.[L] N-Term(TMT6plex); K7(TMT6plex) 3 P17918 Proliferating cell nuclear antigen OS=Mus musculus OX=10090 GN=Pcna PE=1 SV=2 P17918; Q9CZD6; Q91ZH2 Proliferating cell nuclear antigen OS=Mus musculus OX=10090 GN=Pcna PE=1 SV=2; Proliferating cell nuclear antigen OS=Mus musculus OX=10090 GN=Pcna PE=2 SV=1; Proliferating cell nuclear antigen OS=Mus musculus OX=10090 GN=Pcna PE=2 SV=1 0 2 2 0.5245 0 1 1 1 665.35779 1329.7083 1329.71246 -3.13 -0.00208 0/0 0 0 33062554 HCD 30 MS2 29.54054 1286 44.534 79.82 24847 24847 24843 QEplus033719.raw F4 1368.4 1422 1102 745.7 2047.2 1030.4 251 2.86 1 FALSE 0.0008445 0.01162 0.379 -250 126822 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LYDQHLGK [K].lYDQHLGk.[S] N-Term(TMT6plex); K8(TMT6plex) 5 P13541; P13542 Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 B2RWW8; P13541; Q5DTH2; B1AR69; P13542 "Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; MKIAA4211 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2" 0 2 2 0.5813 0 1 1 1 716.42285 1431.83843 1431.83602 1.68 0.0012 0/0 0 0 21761828 HCD 30 MS2 0 1115.4 74.437 79.8223 24848 24848 24843 QEplus033719.raw F4 1189.1 381.3 903.7 2138.4 425.9 1653.8 476 3.63 2 FALSE 1.14E-05 0.0001802 0.808 -250 126831 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYIYDNVAK [K].rYIYDNVAk.[V] N-Term(TMT6plex); K9(TMT6plex) 1 Q05186 Reticulocalbin-1 OS=Mus musculus OX=10090 GN=Rcn1 PE=1 SV=1 Q05186 Reticulocalbin-1 OS=Mus musculus OX=10090 GN=Rcn1 PE=1 SV=1 1 3 3 0.6273 0 1 1 1 533.97882 1599.92191 1599.9259 -2.49 -0.00133 0/0 0 0 17338418 HCD 30 MS2 36.82093 1403.4 68.151 79.8268 24850 24850 24843 QEplus033719.raw F4 1486.9 873.2 1261.2 1524.3 957.9 2316.7 363 3.73 1 FALSE 1.14E-05 3.73E-08 1.509 -250 126839 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKAEVEK [R].lkAEVEk.[Q] N-Term(TMT6plex); K2(TMT6plex); K7(TMT6plex) 3 A0A0A6YVS2 Calcium load-activated calcium channel (Fragment) OS=Mus musculus OX=10090 GN=Tmco1 PE=1 SV=1 A0A0A6YVS2; Q921L3; Q3V4A0 Calcium load-activated calcium channel (Fragment) OS=Mus musculus OX=10090 GN=Tmco1 PE=1 SV=1; Calcium load-activated calcium channel OS=Mus musculus OX=10090 GN=Tmco1 PE=1 SV=1; Calcium load-activated calcium channel (Fragment) OS=Mus musculus OX=10090 GN=Tmco1 PE=2 SV=1 1 3 3 0.2913 0 1 1 1 501.99554 1503.97208 1503.97134 0.49 0.00025 0/0 0 0 10170441 HCD 30 MS2 50.3219 1508.5 110 79.8293 24851 24851 24843 QEplus033719.raw F4 1457.9 1055.4 1539.7 1823.9 1277.5 1896.3 282 2.06 1 FALSE 0.0007341 0.01048 0.397 -250 126849 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IETDKENAEVK [K].iETDkENAEVk.[F] N-Term(TMT6plex); K5(TMT6plex); K11(TMT6plex) 33 F8VQC7 Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1 Q61595-10; A0A087WPW5; Q61595-4; A0A087WS23; A0A087WQD0; Q61595-16; Q61595-14; Q61595-13; Q61595-12; A0A087WS29; Q61595-2; A0A087WQ25; A0A087WQI3; A0A087WPX0; A0A087WP14; Q61595-3; Q61595-9; Q61595-5; F8VQC7; A0A087WRS1; A0A087WP85; Q61595-11; A0A087WQF8; A0A087WQQ5; A0A087WQG4; Q61595-15; Q61595; A0A087WP48; Q61595-6; Q61595-8; A0A087WNW3; A0A087WS04; Q61595-7 Isoform 10 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 4 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 16 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 14 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 13 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 12 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 2 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 3 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 9 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 5 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 11 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 15 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 6 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Isoform 8 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Kinectin OS=Mus musculus OX=10090 GN=Ktn1 PE=1 SV=1; Isoform 7 of Kinectin OS=Mus musculus OX=10090 GN=Ktn1 1 3 3 0.4364 0 1 1 1 655.04919 1963.13303 1963.13148 0.79 0.00052 0/0 0 0 6030002.5 HCD 30 MS2 0 659 110 79.8319 24852 24852 24843 QEplus033719.raw F4 650.4 608.9 745.6 598.9 647 703 413 2.91 1 FALSE 0.0006294 0.009327 0.416 -250 126857 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NKHEAMITDLEER [K].nkHEAMITDLEER.[L] N-Term(TMT6plex); K2(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 1 4 4 0.6869 0 1 1 1 511.77875 2044.09316 2044.08974 1.67 0.00085 0/0 0 0 4544988 HCD 30 MS2 12.56861 436.9 110 79.8343 24853 24853 24843 QEplus033719.raw F4 469.7 318.5 484.9 368.8 441.8 537.7 336 4.28 1 FALSE 1.14E-05 9.04E-07 1.246 -250 126864 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LAQQISDEASR [R].lAQQISDEASR.[Y] N-Term(TMT6plex) 2 Q4FE56 Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Usp9x PE=1 SV=1 Q4FE56; P70398 Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Usp9x PE=1 SV=1; Probable ubiquitin carboxyl-terminal hydrolase FAF-X OS=Mus musculus OX=10090 GN=Usp9x PE=1 SV=2 0 2 2 0.5325 0 1 1 1 723.89087 1446.77446 1446.77499 -0.36 -0.00026 0/0 0 0 3086127 HCD 30 MS2 66.17562 522.7 110 79.8417 24855 24855 24854 QEplus033719.raw F4 579.2 310.5 476.7 504.2 536.3 729.2 311 3.23 1 FALSE 1.14E-05 6.11E-08 1.468 -250 126874 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DISTLNSGKK [R].dISTLNSGkk.[S] N-Term(TMT6plex); K9(TMT6plex); K10(TMT6plex) 5 Q91YQ5 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1 Q99LY0; Q91YQ5; Q5RKP4; Q3U900; Q8BMR3 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 (Fragment) OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=2 SV=1 1 2 2 0.5329 0 1 1 1 875.539 1750.07073 1750.06776 1.69 0.00148 0/0 0 0 2383461 HCD 30 MS2 25.01331 234.8 110 79.8442 24856 24856 24854 QEplus033719.raw F4 206.7 204.7 264.6 197.4 281.1 254.2 368 3.04 1 FALSE 1.14E-05 2.96E-06 1.148 -250 126891 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LQAAYAGDK [R].lQAAYAGDk.[A] N-Term(TMT6plex); K9(TMT6plex) 5 Q62261; Q62261-2 "Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2;Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" Q8BQ35; Q3TTX2; Q62261; A0A0A0MQG2; Q62261-2 "PH domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=2 SV=1; Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=2; Spectrin beta chain, non-erythrocytic 1 (Fragment) OS=Mus musculus OX=10090 GN=Sptbn1 PE=1 SV=1; Isoform 2 of Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus OX=10090 GN=Sptbn1" 0 2 2 0.5908 0 1 1 1 697.90607 1394.80486 1394.80439 0.34 0.00024 0/0 0 0 12830476 HCD 30 MS2 14.786 885.2 110 79.849 24858 24858 24854 QEplus033719.raw F4 885.4 686.3 1073.9 772.8 830.6 1062.2 453 4.13 2 FALSE 1.14E-05 1.00E-06 1.237 -250 126901 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEPGPSGLPGPPGER [R].gEPGPSGLPGPPGER.[G] N-Term(TMT6plex) 2 P11087 Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 P11087-2; P11087 Isoform 2 of Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1; Collagen alpha-1(I) chain OS=Mus musculus OX=10090 GN=Col1a1 PE=1 SV=4 0 2 2 0.7213 0 1 1 1 816.93103 1632.85478 1632.8543 0.3 0.00024 0/0 0 0 12530248 HCD 30 MS2 19.10324 398.7 110 79.8515 24859 24859 24854 QEplus033719.raw F4 360.4 484.2 481.6 172.5 471.3 422.3 289 4.27 1 FALSE 1.14E-05 1.13E-10 1.987 -250 126911 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VFAENETGLSRPR [R].vFAENETGLSRPR.[R] N-Term(TMT6plex) 7 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1; Q8BUJ0 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Ttn PE=2 SV=1 0 3 3 0.6899 0 1 1 1 568.97821 1704.92008 1704.92305 -1.74 -0.00099 0/0 0 0 9747213 HCD 30 MS2 19.0049 840.7 110 79.854 24860 24860 24854 QEplus033719.raw F4 804.4 550 797.2 1044.5 705.4 1142.8 338 5.45 2 FALSE 1.14E-05 5.15E-14 2.621 -250 126923 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DGLEMEK [K].dGLEMEk.[C] N-Term(TMT6plex); K7(TMT6plex) 2 P63028 Translationally-controlled tumor protein OS=Mus musculus OX=10090 GN=Tpt1 PE=1 SV=1 D3YU75; P63028 Translationally-controlled tumor protein OS=Mus musculus OX=10090 GN=Tpt1 PE=1 SV=1; Translationally-controlled tumor protein OS=Mus musculus OX=10090 GN=Tpt1 PE=1 SV=1 0 3 3 0.2711 0 1 1 1 427.2377 1279.69855 1279.69681 1.36 0.00058 0/0 0 0 6079832.5 HCD 30 MS2 46.44169 596.9 110 79.859 24862 24862 24854 QEplus033719.raw F4 644.2 430.3 583.2 475.5 667.4 780.6 364 2.73 1 FALSE 0.002064 0.03793 0.182 -250 126937 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KPSLVASK [R].kPSLVASk.[L] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 5 E9Q827 cAMP-regulated phosphoprotein 19 OS=Mus musculus OX=10090 GN=Arpp19 PE=1 SV=1 E9Q827; P56212; E9PXD7; P56212-2; E9Q4B9 cAMP-regulated phosphoprotein 19 OS=Mus musculus OX=10090 GN=Arpp19 PE=1 SV=1; cAMP-regulated phosphoprotein 19 OS=Mus musculus OX=10090 GN=Arpp19 PE=1 SV=2; cAMP-regulated phosphoprotein 19 OS=Mus musculus OX=10090 GN=Arpp19 PE=1 SV=1; Isoform ARPP-16 of cAMP-regulated phosphoprotein 19 OS=Mus musculus OX=10090 GN=Arpp19; cAMP-regulated phosphoprotein 19 OS=Mus musculus OX=10090 GN=Arpp19 PE=1 SV=1 0 3 3 0.6275 0 1 1 1 506.33939 1517.0036 1517.00298 0.41 0.00021 0/0 0 0 31450244 HCD 30 MS2 56.98064 836.2 29.979 79.8638 24864 24864 24854 QEplus033719.raw F4 884.7 646 848 719.2 1020.2 898.8 211 4 1 FALSE 1.14E-05 0.0002028 0.798 -250 126944 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HLALVK [K].hLALVk.[L] N-Term(TMT6plex); K6(TMT6plex) 4 Q3U4B5 Cd80 protein OS=Mus musculus OX=10090 GN=Cd80 PE=2 SV=1 Q3U4B5; Q00609-2; Q9R1Z9; Q549R2 Cd80 protein OS=Mus musculus OX=10090 GN=Cd80 PE=2 SV=1; Isoform 2 of T-lymphocyte activation antigen CD80 OS=Mus musculus OX=10090 GN=Cd80; B lymphocyte activation antigen CD80 OS=Mus musculus OX=10090 GN=Cd80 PE=2 SV=1; B lymphocyte activation antigen CD80 OS=Mus musculus OX=10090 GN=Cd80 PE=2 SV=1 0 3 3 0.1879 0 1 1 1 380.26172 1138.7706 1138.77124 -0.56 -0.00021 0/0 0 0 9777405 HCD 30 MS2 22.32824 468.6 110 79.8711 24866 24866 24865 QEplus033719.raw F4 452.4 373.2 517.2 415.3 497.2 556.5 23 2.82 1 FALSE 0.0023 0.04562 0.155 -250 126949 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LSSVVTQHDAK [R].lSSVVTQHDAk.[K] N-Term(TMT6plex); K11(TMT6plex) 2 Q91WQ3 "Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3" Q91WQ3; A2A7S7 "Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Yars1 PE=1 SV=3; Tyrosine--tRNA ligase OS=Mus musculus OX=10090 GN=Yars PE=1 SV=1" 0 3 3 0.6307 0 1 1 1 548.3233 1642.95536 1642.95284 1.53 0.00084 0/0 0 0 27211622 HCD 30 MS2 54.86901 766.1 41.371 79.8733 24867 24867 24865 QEplus033719.raw F4 789.8 693 820.2 644.1 921.5 728 395 4.36 1 FALSE 1.14E-05 1.79E-07 1.379 -250 126958 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FMSVQRPGPYDRPGTAR [K].fMSVQRPGPYDRPGTAR.[R] N-Term(TMT6plex) 3 Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 Q9Z2X1-2; J3QM80; Q9Z2X1 Isoform 2 of Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf; Heterogeneous nuclear ribonucleoprotein F (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 0 4 4 0.6619 0 1 1 1 541.78815 2164.13076 2164.12831 1.13 0.00061 0/0 0 0 33322178 HCD 30 MS2 27.32725 457.5 32.131 79.8756 24868 24868 24865 QEplus033719.raw F4 452.3 460.1 508.9 319.3 571 433.5 355 4.2 1 FALSE 1.14E-05 0.0001185 0.843 -250 126965 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKPGAPLRPK [K].lkPGAPLRPk.[L] N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; B7FAV1; F6XC15; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 3 3 0.5 0 1 1 1 588.73285 1764.18399 1764.18267 0.75 0.00044 0/0 0 0 32809704 HCD 30 MS2 37.56555 1162.8 65.109 79.8778 24869 24869 24865 QEplus033719.raw F4 1139.5 1120 1300.2 832.6 1413 1171.6 48 2.68 1 FALSE 0.001177 0.01593 0.322 -250 127016 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IFHINPR [K].iFHINPR.[L] N-Term(TMT6plex) 3 A0A0R4J0V5 DNA-directed RNA polymerase subunit OS=Mus musculus OX=10090 GN=Polr2a PE=1 SV=1 A0A0R4J0V5; P08775; O08847 DNA-directed RNA polymerase subunit OS=Mus musculus OX=10090 GN=Polr2a PE=1 SV=1; DNA-directed RNA polymerase II subunit RPB1 OS=Mus musculus OX=10090 GN=Polr2a PE=1 SV=3; DNA-directed RNA polymerase subunit OS=Mus musculus OX=10090 GN=Polr2a PE=2 SV=1 0 3 3 0.4826 0 1 1 1 375.89594 1125.67325 1125.67303 0.2 0.00007 0/0 0 0 4098682.75 HCD 30 MS2 44.13102 619.8 110 79.8928 24875 24875 24865 QEplus033719.raw F4 648.2 553 650.8 534.4 701.2 631 129 2.01 1 FALSE 0.001778 0.03075 0.213 -250 127036 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SDTLISK [K].sDTLISk.[H] N-Term(TMT6plex); K7(TMT6plex) 9 Q52KI7 Low density lipoprotein receptor-related protein associated protein 1 OS=Mus musculus OX=10090 GN=Lrpap1 PE=1 SV=1 Q52KI7; Q3TL96; Q6PEM5; Q6PB52; Q8C252; Q5D0B0; A0A1S6GWI9; Q6ZY49; Q8K295 Low density lipoprotein receptor-related protein associated protein 1 OS=Mus musculus OX=10090 GN=Lrpap1 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Lrpap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Lrpap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Lrpap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Low density lipoprotein receptor-associated protein 1 OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1; Lrpap1 protein (Fragment) OS=Mus musculus OX=10090 GN=Lrpap1 PE=2 SV=1 0 2 2 0.1477 0 1 1 1 611.37463 1221.74199 1221.74547 -2.85 -0.00174 0/0 0 0 15045545 HCD 30 MS2 34.83731 1220.3 92.878 79.9069 24880 24880 24876 QEplus033719.raw F4 1292.5 933.7 1315.2 1075.5 1395.6 1309.6 295 2.64 1 FALSE 0.0006294 0.009477 0.413 -250 127043 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIGVDNPAAK [K].nIGVDNPAAk.[V] N-Term(TMT6plex); K10(TMT6plex) 6 Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 A0A1W2P7B7; Q9JJD8; Q542X7; A0A1W2P6Q3; A0A1W2P828; A0A1W2P871 T-complex protein 1 subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1; CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=2 SV=1; CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1; T-complex protein 1 subunit beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1; T-complex protein 1 subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1; T-complex protein 1 subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 0 2 2 0.6945 0 1 1 1 728.93048 1456.85369 1456.8524 0.88 0.00064 0/0 0 0 12524154 HCD 30 MS2 0 645.7 110 79.9094 24881 24881 24876 QEplus033719.raw F4 723.9 537.7 744.7 493.1 675.1 699.9 349 4.55 1 FALSE 1.14E-05 2.54E-07 1.35 -250 127052 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YQQGDFGYCPR [K].yQQGDFGYcPR.[V] N-Term(TMT6plex); C9(Carbamidomethyl) 10 N0E4C5 Casein kinase II subunit beta OS=Mus musculus OX=10090 GN=Csnk2b-Ly6g5b PE=2 SV=1 G3UZX4; N0E4C5; P67871; N0E462; G3UZA4; N0E4C0; G3UXG7; N0E463; G3UXU2; G3UZJ5 Casein kinase II subunit beta OS=Mus musculus OX=10090 GN=Csnk2b PE=1 SV=1; Casein kinase II subunit beta OS=Mus musculus OX=10090 GN=Csnk2b-Ly6g5b PE=2 SV=1; Casein kinase II subunit beta OS=Mus musculus OX=10090 GN=Csnk2b PE=1 SV=1; Casein kinase II subunit beta OS=Mus musculus OX=10090 GN=Csnk2b PE=2 SV=1; Casein kinase II subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Csnk2b PE=1 SV=8; Casein kinase II subunit beta OS=Mus musculus OX=10090 GN=Csnk2b PE=2 SV=1; Casein kinase II subunit beta OS=Mus musculus OX=10090 GN=Csnk2b PE=1 SV=1; Casein kinase II subunit beta OS=Mus musculus OX=10090 GN=Csnk2b-Ly6g5b PE=2 SV=1; Casein kinase II subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Csnk2b PE=1 SV=2; Casein kinase II subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Csnk2b PE=1 SV=2 0 2 2 0.9206 0 1 1 1 810.37671 1619.74614 1619.74739 -0.77 -0.00063 0/0 0 0 10832645 HCD 30 MS2 8.868364 528.8 110 79.912 24882 24882 24876 QEplus033719.raw F4 475.5 506.1 634.4 477.5 550.1 528.9 40 4.66 1 FALSE 1.14E-05 1.54E-08 1.582 -250 127060 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DQNVFDSK [K].dQNVFDSk.[K] N-Term(TMT6plex); K8(TMT6plex) 4 F8VQC1 Signal recognition particle subunit SRP72 OS=Mus musculus OX=10090 GN=Srp72 PE=1 SV=1 A0JLN1; Q3UZL8; F8VQC1; A0PJ97 Srp72 protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1; Signal recognition particle subunit SRP72 OS=Mus musculus OX=10090 GN=Srp72 PE=1 SV=1; Srp72 protein (Fragment) OS=Mus musculus OX=10090 GN=Srp72 PE=2 SV=1 0 2 2 0.5795 0 1 1 1 705.88519 1410.76311 1410.76292 0.14 0.0001 0/0 0 0 9037846 HCD 30 MS2 10.74998 698.6 110 79.9145 24883 24883 24876 QEplus033719.raw F4 705.5 668.4 817.5 559.6 720.9 719.5 322 3.02 1 FALSE 1.14E-05 0.0003634 0.749 -250 127064 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IVVHAGGVIR [R].iVVHAGGVIR.[I] N-Term(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.507 0 1 1 1 417.2695 1249.79395 1249.79421 -0.21 -0.00009 0/0 0 0 8093249.5 HCD 30 MS2 42.17456 454.4 110 79.9169 24884 24884 24876 QEplus033719.raw F4 443 316.8 484.9 419.8 482.3 579.8 185 3.59 2 FALSE 1.14E-05 0.0001169 0.844 -250 127074 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GADMSVPDEK [R].gADMSVPDEk.[G] N-Term(TMT6plex); K10(TMT6plex) 2 B7ZP20 Ankyrin repeat and FYVE domain containing 1 OS=Mus musculus OX=10090 GN=Ankfy1 PE=2 SV=1 B7ZP20; Q810B6 Ankyrin repeat and FYVE domain containing 1 OS=Mus musculus OX=10090 GN=Ankfy1 PE=2 SV=1; Rabankyrin-5 OS=Mus musculus OX=10090 GN=Ankfy1 PE=1 SV=2 0 2 2 0.6557 0 1 1 1 753.89734 1506.7874 1506.78742 -0.01 -0.00001 0/0 0 0 5261000.5 HCD 30 MS2 0 338.6 110 79.9195 24885 24885 24876 QEplus033719.raw F4 327.5 322.9 380.6 254.1 403.4 343 285 3.95 1 FALSE 1.14E-05 1.17E-08 1.604 -250 127094 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APTIVGK [K].aPTIVGk.[S] N-Term(TMT6plex); K7(TMT6plex) 3 O54734 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Mus musculus OX=10090 GN=Ddost PE=1 SV=2 O54734; Q3UG68; Q3UC51 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Mus musculus OX=10090 GN=Ddost PE=1 SV=2; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Mus musculus OX=10090 GN=Ddost PE=2 SV=1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Mus musculus OX=10090 GN=Ddost PE=2 SV=1 0 2 2 0.6048 0 1 1 1 572.37921 1143.75115 1143.75017 0.86 0.00049 0/0 0 0 45096484 HCD 30 MS2 12.21317 885 27.226 79.934 24890 24890 24887 QEplus033719.raw F4 861 813.8 974.3 658.4 1156.7 845.6 168 2.48 1 FALSE 0.0007056 0.01015 0.402 -250 127099 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AFSTSVSK [K].aFSTSVSk.[Q] N-Term(TMT6plex); K8(TMT6plex) 5 Q8C0C7 Phenylalanine--tRNA ligase alpha subunit OS=Mus musculus OX=10090 GN=Farsa PE=1 SV=1 Q4FJQ2; Q8BXN0; Q8BJG2; E9PWY9; Q8C0C7 Farsla protein OS=Mus musculus OX=10090 GN=Farsa PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Farsa PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Farsa PE=2 SV=1; Phenylalanine--tRNA ligase OS=Mus musculus OX=10090 GN=Farsa PE=1 SV=1; Phenylalanine--tRNA ligase alpha subunit OS=Mus musculus OX=10090 GN=Farsa PE=1 SV=1 0 2 2 0.628 0 1 1 1 642.88202 1284.75676 1284.75637 0.3 0.00019 0/0 0 0 17554716 HCD 30 MS2 32.94947 1208 110 79.9366 24891 24891 24887 QEplus033719.raw F4 1270.2 975.3 1319.1 1060.1 1246.3 1377.3 293 3.36 1 FALSE 1.14E-05 9.97E-05 0.857 -250 127108 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FMSVQRPGPYDRPGTAR [K].fMSVQRPGPYDRPGTAR.[R] N-Term(TMT6plex) 3 Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 Q9Z2X1-2; J3QM80; Q9Z2X1 Isoform 2 of Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf; Heterogeneous nuclear ribonucleoprotein F (Fragment) OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=8; Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3 0 3 3 0.6454 0 1 1 1 722.0473 2164.12735 2164.12831 -0.44 -0.00032 0/0 0 0 7136713 HCD 30 MS2 0 228.2 110 79.9391 24892 24892 24887 QEplus033719.raw F4 224.8 224.7 263.7 163.4 258.7 233.7 342 4.23 1 FALSE 1.14E-05 2.29E-06 1.169 -250 127121 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VELEGGQGPGK [R].vELEGGQGPGk.[R] N-Term(TMT6plex); K11(TMT6plex) 8 G3X9Q1 Integrin alpha-7 OS=Mus musculus OX=10090 GN=Itga7 PE=1 SV=1 Q61738-3; G3X9Q1; Q61738; Q61738-4; Q61738-2; Q61738-5; Q3TZS3; Q61738-6 Isoform Alpha-7X1B of Integrin alpha-7 OS=Mus musculus OX=10090 GN=Itga7; Integrin alpha-7 OS=Mus musculus OX=10090 GN=Itga7 PE=1 SV=1; Integrin alpha-7 OS=Mus musculus OX=10090 GN=Itga7 PE=1 SV=3; Isoform Alpha-7X2A of Integrin alpha-7 OS=Mus musculus OX=10090 GN=Itga7; Isoform Alpha-7X1A of Integrin alpha-7 OS=Mus musculus OX=10090 GN=Itga7; Isoform Alpha-7X2B of Integrin alpha-7 OS=Mus musculus OX=10090 GN=Itga7; Integrin alpha-7 OS=Mus musculus OX=10090 GN=Itga7 PE=1 SV=1; Isoform Alpha-7X1X2A of Integrin alpha-7 OS=Mus musculus OX=10090 GN=Itga7 0 2 2 0.6712 0 1 1 1 764.93964 1528.872 1528.87353 -1 -0.00077 0/0 0 0 9571548 HCD 30 MS2 0 509.2 110 79.9441 24894 24894 24887 QEplus033719.raw F4 564.7 295.8 552.4 588.5 367.7 685.9 370 3.71 1 FALSE 1.14E-05 4.58E-07 1.302 -250 127141 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SVFEEEVR [K].sVFEEEVR.[E] N-Term(TMT6plex) 2 A0A0R4J0Q5 Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1 A0A0R4J0Q5; P21619 Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=1; Lamin-B2 OS=Mus musculus OX=10090 GN=Lmnb2 PE=1 SV=2 0 2 2 0.4495 0 1 1 1 612.328 1223.64873 1223.64693 1.47 0.0009 0/0 0 0 22172320 HCD 30 MS2 50.32592 1172.2 78.317 79.9513 24897 24897 24887 QEplus033719.raw F4 1234.6 819.7 1276.8 1170 1097.3 1434.9 189 2.18 1 FALSE 0.0008183 0.01122 0.385 -250 127147 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVMGGQSAGPQHTEAETIQK [R].gVMGGQSAGPQHTEAETIQk.[L] N-Term(TMT6plex); K20(TMT6plex) 4 Q9Z1Z0 General vesicular transport factor p115 OS=Mus musculus OX=10090 GN=Uso1 PE=1 SV=2 Q9Z1Z0-2; A0A0J9YUG0; Q9Z1Z0-3; Q9Z1Z0 Isoform 2 of General vesicular transport factor p115 OS=Mus musculus OX=10090 GN=Uso1; General vesicular transport factor p115 OS=Mus musculus OX=10090 GN=Uso1 PE=1 SV=1; Isoform 3 of General vesicular transport factor p115 OS=Mus musculus OX=10090 GN=Uso1; General vesicular transport factor p115 OS=Mus musculus OX=10090 GN=Uso1 PE=1 SV=2 0 3 3 0.8109 0 1 1 1 828.7691 2484.29276 2484.29169 0.43 0.00036 0/0 0 0 7905855.5 HCD 30 MS2 0 218.2 110 79.9612 24900 24900 24898 QEplus033719.raw F4 260.9 152 224 240.8 229.1 202.3 381 7.88 1 FALSE 1.14E-05 6.31E-16 4.597 -250 127168 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous NIGVDNPAAK [K].nIGVDNPAAk.[V] N-Term(TMT6plex); K10(TMT6plex) 6 Q542X7 CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 A0A1W2P7B7; Q9JJD8; Q542X7; A0A1W2P6Q3; A0A1W2P828; A0A1W2P871 T-complex protein 1 subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1; CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=2 SV=1; CCT-beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1; T-complex protein 1 subunit beta OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1; T-complex protein 1 subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1; T-complex protein 1 subunit beta (Fragment) OS=Mus musculus OX=10090 GN=Cct2 PE=1 SV=1 0 3 3 0.6582 0 1 1 1 486.29031 1456.85639 1456.8524 2.74 0.00133 0/0 0 0 14734381 HCD 30 MS2 31.3972 1024.3 107.068 79.9681 24903 24903 24898 QEplus033719.raw F4 1076.2 838.1 1156.3 708 1162.9 1204.6 353 3.16 1 FALSE 5.44E-05 0.001724 0.613 -250 127174 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VAGMAVYHGK [R].vAGMAVYHGk.[L] N-Term(TMT6plex); K10(TMT6plex) 2 P46935 E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus OX=10090 GN=Nedd4 PE=1 SV=3 P46935; A0A571BDN7 E3 ubiquitin-protein ligase NEDD4 OS=Mus musculus OX=10090 GN=Nedd4 PE=1 SV=3; HECT-type E3 ubiquitin transferase OS=Mus musculus OX=10090 GN=Nedd4 PE=1 SV=1 0 3 3 0.6534 0 1 1 1 497.62344 1490.85578 1490.85538 0.27 0.00013 0/0 0 0 12893458 HCD 30 MS2 28.66697 969.4 99.27 79.9705 24904 24904 24898 QEplus033719.raw F4 1280.6 655.9 898.2 1119.8 928 933.8 479 3.26 1 FALSE 1.14E-05 4.15E-06 1.12 -250 127183 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous YYPTEDVPR [R].yYPTEDVPR.[K] N-Term(TMT6plex) 2 P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 Q3UFI4; P47911 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=2 SV=1; 60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3 0 2 2 0.7722 0 1 1 1 684.85461 1368.70195 1368.6997 1.65 0.00113 0/0 0 0 5832709 HCD 30 MS2 65.82222 1067.6 110 79.973 24905 24905 24898 QEplus033719.raw F4 940 1042.6 1180.3 822.5 1369.3 1051 189 2.81 1 FALSE 0.0008183 0.01129 0.384 -250 127187 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QSGYGGQTKPIFR [K].qSGYGGQTkPIFR.[K] N-Term(TMT6plex); K9(TMT6plex) 2 Q5M9P1 Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1 A0A0A6YW33; Q5M9P1 Predicted pseudogene 6525 OS=Mus musculus OX=10090 GN=Gm6525 PE=3 SV=1; Ribosomal protein L36A OS=Mus musculus OX=10090 GN=Rpl36a PE=1 SV=1 0 3 3 0.5425 0 1 1 1 633.02887 1897.07206 1897.0696 1.29 0.00082 0/0 0 0 6664529.5 HCD 30 MS2 28.18509 816.1 110 79.9755 24906 24906 24898 QEplus033719.raw F4 761.4 672.1 889.2 667.7 1004 902.1 403 3.65 1 FALSE 1.14E-05 2.12E-09 1.745 -250 127196 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQLAALRK [K].eQLAALRk.[H] N-Term(TMT6plex); K8(TMT6plex) 2 E9PV44 ATP synthase F1 subunit epsilon OS=Mus musculus OX=10090 GN=Atpif1 PE=1 SV=1 E9PV44; O35143 "ATP synthase F1 subunit epsilon OS=Mus musculus OX=10090 GN=Atpif1 PE=1 SV=1; ATPase inhibitor, mitochondrial OS=Mus musculus OX=10090 GN=Atp5if1 PE=1 SV=2" 1 2 2 0.3693 0 1 1 1 693.94519 1386.8831 1386.88331 -0.14 -0.0001 0/0 0 0 6964579 HCD 30 MS2 33.53107 568.7 110 79.978 24907 24907 24898 QEplus033719.raw F4 581.7 504.1 633.6 456 629.2 607.6 355 2.41 1 FALSE 0.0009075 0.01258 0.365 -250 127225 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ATIISEQQAK [K].aTIISEQQAk.[S] N-Term(TMT6plex); K10(TMT6plex) 5 P42232 Signal transducer and activator of transcription 5B OS=Mus musculus OX=10090 GN=Stat5b PE=1 SV=1 Q6PHA0; Q9R0X9; B2C3G8; P42232; Q9JIA0 Stat5a protein OS=Mus musculus OX=10090 GN=Stat5a PE=2 SV=1; Mammary gland factor STAT5A (Fragment) OS=Mus musculus OX=10090 GN=STAT5A PE=4 SV=1; Signal transducer and activator of transcription OS=Mus musculus OX=10090 GN=Stat5a PE=1 SV=1; Signal transducer and activator of transcription 5B OS=Mus musculus OX=10090 GN=Stat5b PE=1 SV=1; Signal transducer and activator of transcription OS=Mus musculus OX=10090 GN=Stat5a PE=1 SV=2 0 2 2 0.725 0 1 1 1 773.96307 1546.91887 1546.92048 -1.04 -0.0008 0/0 0 0 3107932.75 HCD 30 MS2 0 267.3 110 79.9904 24911 24911 24909 QEplus033719.raw F4 274.4 187.2 271.8 295.7 250.4 324.5 421 4.4 1 FALSE 1.14E-05 9.76E-09 1.619 -250 127243 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LTPEEIER [R].lTPEEIER.[M] N-Term(TMT6plex) 8 P20029 Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3 Q3TWF2; P20029; Q3TKF8; Q9DC41; Q3U9G2; Q3U6V3; Q3U7T8; Q3TI47 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Mus musculus OX=10090 GN=Hspa5 PE=1 SV=3; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein (Fragment) OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1; 78 kDa glucose-regulated protein OS=Mus musculus OX=10090 GN=Hspa5 PE=2 SV=1 0 2 2 0.2993 0 1 1 1 608.34338 1215.67949 1215.67823 1.03 0.00063 0/0 0 0 17505794 HCD 30 MS2 37.57257 1365.9 85.731 79.9971 24914 24914 24909 QEplus033719.raw F4 1386.3 1378.2 1434.2 1094.6 1563 1339.4 368 2.84 1 FALSE 0.001284 0.01754 0.304 -250 127250 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IYTFNQSR [K].iYTFNQSR.[Y] N-Term(TMT6plex) 3 Q91ZJ5 UTP--glucose-1-phosphate uridylyltransferase OS=Mus musculus OX=10090 GN=Ugp2 PE=1 SV=3 Q3U548; Q8R0M2; Q91ZJ5 UTP--glucose-1-phosphate uridylyltransferase OS=Mus musculus OX=10090 GN=Ugp2 PE=2 SV=1; UTP--glucose-1-phosphate uridylyltransferase (Fragment) OS=Mus musculus OX=10090 GN=Ugp2 PE=2 SV=1; UTP--glucose-1-phosphate uridylyltransferase OS=Mus musculus OX=10090 GN=Ugp2 PE=1 SV=3 0 2 2 0.5487 0 1 1 1 629.3432 1257.67912 1257.6789 0.18 0.00011 0/0 0 0 14694313 HCD 30 MS2 24.46511 928.7 110 79.9997 24915 24915 24909 QEplus033719.raw F4 939.7 749 983.8 878.9 989.5 1031.2 218 2.77 1 FALSE 3.35E-05 0.001399 0.632 -250 127279 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYSFIAR [K].sYSFIAR.[M] N-Term(TMT6plex) 3 G5E8I8 Calcium homeostasis endoplasmic reticulum protein OS=Mus musculus OX=10090 GN=Cherp PE=1 SV=2 G5E8I8; Q8CGZ0; A0A1D5RL92 Calcium homeostasis endoplasmic reticulum protein OS=Mus musculus OX=10090 GN=Cherp PE=1 SV=2; Calcium homeostasis endoplasmic reticulum protein OS=Mus musculus OX=10090 GN=Cherp PE=1 SV=1; Calcium homeostasis endoplasmic reticulum protein OS=Mus musculus OX=10090 GN=Cherp PE=1 SV=1 0 2 2 1 0 1 1 1 536.80334 1072.59941 1072.59886 0.51 0.00028 0/0 0 0 6363445 HCD 30 MS2 67.52685 1188.8 83.7 80.0095 24919 24919 24909 QEplus033719.raw F4 1241.6 1197 1506.2 900.3 1108.1 1179.4 204 1.94 1 FALSE 0.003058 0.05944 0.116 -250 127280 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RYIYDNVAK [K].rYIYDNVAk.[V] N-Term(TMT6plex); K9(TMT6plex) 1 Q05186 Reticulocalbin-1 OS=Mus musculus OX=10090 GN=Rcn1 PE=1 SV=1 Q05186 Reticulocalbin-1 OS=Mus musculus OX=10090 GN=Rcn1 PE=1 SV=1 1 2 2 0.5157 0 1 1 1 800.46802 1599.92876 1599.9259 1.79 0.00143 0/0 0 0 5007753 HCD 30 MS2 50.37792 257.1 110 80.0168 24921 24921 24920 QEplus033719.raw F4 200.8 238.6 326.4 241.2 252.2 283.6 381 3.18 1 FALSE 1.14E-05 3.91E-06 1.125 -250 127288 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FLNSQTK [R].fLNSQTk.[L] N-Term(TMT6plex); K7(TMT6plex) 2 B1AX98 Leucine rich repeat containing 47 OS=Mus musculus OX=10090 GN=Lrrc47 PE=1 SV=1 B1AX98; E9PV22 Leucine rich repeat containing 47 OS=Mus musculus OX=10090 GN=Lrrc47 PE=1 SV=1; Leucine-rich repeat-containing protein 47 OS=Mus musculus OX=10090 GN=Lrrc47 PE=1 SV=1 0 2 2 0.3175 0 1 1 1 648.38873 1295.77019 1295.77236 -1.67 -0.00108 0/0 0 0 3403533.5 HCD 30 MS2 66.60865 740.7 110 80.0193 24922 24922 24920 QEplus033719.raw F4 762.5 535.8 767.8 623.6 881.3 873.3 297 1.89 1 FALSE 0.001177 0.0158 0.323 -250 127308 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TLQQQTFK [K].tLQQQTFk.[I] N-Term(TMT6plex); K8(TMT6plex) 10 Q3TN85; P54728 UV excision repair protein RAD23 homolog A (Fragment) OS=Mus musculus OX=10090 GN=Rad23a PE=1 SV=1;UV excision repair protein RAD23 homolog B OS=Mus musculus OX=10090 GN=Rad23b PE=1 SV=2 Q8BRA9; Q3TJ52; Q3TN85; Q9D717; P54728; Q3U041; P54726; Q8CAP3; Q3UQN3; Q6NVC3 Uncharacterized protein OS=Mus musculus OX=10090 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rad23b PE=2 SV=1; UV excision repair protein RAD23 homolog A (Fragment) OS=Mus musculus OX=10090 GN=Rad23a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rad23a PE=2 SV=1; UV excision repair protein RAD23 homolog B OS=Mus musculus OX=10090 GN=Rad23b PE=1 SV=2; UV excision repair protein RAD23 OS=Mus musculus OX=10090 GN=Rad23b PE=2 SV=1; UV excision repair protein RAD23 homolog A OS=Mus musculus OX=10090 GN=Rad23a PE=1 SV=2; UV excision repair protein RAD23 OS=Mus musculus OX=10090 GN=Rad23a PE=1 SV=1; UV excision repair protein RAD23 OS=Mus musculus OX=10090 GN=Rad23b PE=2 SV=1; UV excision repair protein RAD23 OS=Mus musculus OX=10090 GN=Rad23b PE=2 SV=1 0 2 2 0.5604 0 1 1 1 726.43494 1451.8626 1451.86224 0.25 0.00018 0/0 0 0 20598846 HCD 30 MS2 8.798285 1017.3 110 80.0241 24924 24924 24920 QEplus033719.raw F4 1147.2 914.6 1120.6 832.4 1037.5 1051.8 360 3.89 2 FALSE 1.14E-05 9.31E-05 0.863 -250 127317 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HIFNVK [K].hIFNVk.[V] N-Term(TMT6plex); K6(TMT6plex) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 3 3 0.5273 0 1 1 1 405.92542 1215.76169 1215.7614 0.24 0.0001 0/0 0 0 10405120 HCD 30 MS2 20.52452 595.9 110 80.0266 24925 24925 24920 QEplus033719.raw F4 814.4 284.5 464 768 449.5 795.1 341 2.75 2 FALSE 0.003304 0.06419 0.103 -250 127329 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RNWEALK [K].rNWEALk.[N] N-Term(TMT6plex); K7(TMT6plex) 4 A0A6Q6PUT5 Pre-mRNA-processing factor 40 homolog A (Fragment) OS=Mus musculus OX=10090 GN=Prpf40a PE=1 SV=1 A0A6Q6PUT5; Q9R1C7-2; A0A1B0GRU8; Q9R1C7 Pre-mRNA-processing factor 40 homolog A (Fragment) OS=Mus musculus OX=10090 GN=Prpf40a PE=1 SV=1; Isoform 2 of Pre-mRNA-processing factor 40 homolog A OS=Mus musculus OX=10090 GN=Prpf40a; Pre-mRNA-processing factor 40 homolog A OS=Mus musculus OX=10090 GN=Prpf40a PE=1 SV=1; Pre-mRNA-processing factor 40 homolog A OS=Mus musculus OX=10090 GN=Prpf40a PE=1 SV=1 1 3 3 0.2107 0 1 1 1 458.94617 1374.82395 1374.82579 -1.34 -0.00061 0/0 0 0 5624981.5 HCD 30 MS2 52.36314 1040.8 110 80.0316 24927 24927 24920 QEplus033719.raw F4 1067.6 856.1 1138.2 799.3 1123.6 1259.9 557 3.18 1 FALSE 0.006282 0.102 0.001 -250 127333 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SETAPAETAAPAPVEK [-].sETAPAETAAPAPVEk.[S] N-Term(TMT6plex); K16(TMT6plex) 1 Q1WWK3 Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1 Q1WWK3 Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1 0 2 2 0.7262 0 1 1 1 1014.0589 2027.11052 2027.10611 2.18 0.00221 0/0 0 0 3993865.75 HCD 30 MS2 0 166.3 110 80.0342 24928 24928 24920 QEplus033719.raw F4 134.9 234.3 211.7 81.8 222.3 112.6 408 5.26 1 FALSE 1.14E-05 6.31E-16 3.404 -250 127337 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLQEQLGK [K].kLQEQLGk.[A] N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex) 3 A2AVJ7 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1 A2AVJ7; Q99PL5; Q6ZPS0 Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=1; Ribosome-binding protein 1 OS=Mus musculus OX=10090 GN=Rrbp1 PE=1 SV=2; MKIAA1398 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrbp1 PE=2 SV=1 1 3 3 0.4281 0 1 1 1 544.35291 1631.04416 1631.0459 -1.07 -0.00058 0/0 0 0 33526942 HCD 30 MS2 30.03938 1198.1 53.901 80.0364 24929 24929 24920 QEplus033719.raw F4 1256 1126.2 1248.3 891 1522.3 1144.7 268 3.2 1 FALSE 1.14E-05 4.68E-05 0.92 -250 127351 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RVTIMPK [K].rVTIMPk.[D] N-Term(TMT6plex); K7(TMT6plex) 8 P84244; A1L0V4 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2;Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1 P84244; P02301; A1L0V4; P68433; F8WI35; B9EI85; A1L0U3; A0A1W2P768 Histone H3.3 OS=Mus musculus OX=10090 GN=H3-3a PE=1 SV=2; Histone H3.3C OS=Mus musculus OX=10090 GN=H3-5 PE=3 SV=3; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3i PE=2 SV=1; Histone H3.1 OS=Mus musculus OX=10090 GN=H3c1 PE=1 SV=2; Histone H3 OS=Mus musculus OX=10090 GN=H3f3a PE=1 SV=1; Histone H3 OS=Mus musculus OX=10090 GN=Hist2h3b PE=2 SV=1; Histone H3 (Fragment) OS=Mus musculus OX=10090 GN=Hist1h3e PE=2 SV=1; Histone H3.2 OS=Mus musculus OX=10090 GN=H3c14 PE=1 SV=1 1 3 3 0.4904 0 1 1 1 434.94928 1302.83329 1302.83318 0.08 0.00003 0/0 0 0 12215064 HCD 30 MS2 18.09063 838.3 71.918 80.046 24932 24932 24931 QEplus033719.raw F4 565.1 988.1 659.9 522.9 1568.8 725.2 281 3.12 2 FALSE 0.001083 0.01403 0.345 -250 127374 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VTNEDFKK [K].vTNEDFkk.[S] N-Term(TMT6plex); K7(TMT6plex); K8(TMT6plex) 1 P62192 26S proteasome regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmc1 PE=1 SV=1 P62192 26S proteasome regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmc1 PE=1 SV=1 1 3 3 0.5243 0 1 1 1 556.66919 1667.99302 1667.99353 -0.31 -0.00017 0/0 0 0 21690434 HCD 30 MS2 34.05259 1701.3 78.838 80.055 24936 24936 24931 QEplus033719.raw F4 1835.5 1330 1783.3 1584.1 1740.1 1934.9 354 2.06 1 FALSE 5.44E-05 0.002304 0.585 -250 127382 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LLESEK [RK].lLESEk.[AGH] N-Term(TMT6plex); K6(TMT6plex) 11 Q921H8 "3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus OX=10090 GN=Acaa1a PE=1 SV=1" Q3UPU8; H3BJG8; Q8BLD7; Q91YK2; Q9WV89-4; H3BKL5; Q9WV89-2; Q9WV89; Q921H8; Q6ZQH4; H3BKA1 "Uncharacterized protein OS=Mus musculus OX=10090 GN=Acaa1a PE=2 SV=1; 3-ketoacyl-CoA thiolase A, peroxisomal (Fragment) OS=Mus musculus OX=10090 GN=Acaa1a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Acaa1a PE=2 SV=1; Ribosomal RNA processing protein 1 homolog B OS=Mus musculus OX=10090 GN=Rrp1b PE=1 SV=2; Isoform 4 of Syntaxin-binding protein 4 OS=Mus musculus OX=10090 GN=Stxbp4; 3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus OX=10090 GN=Acaa1a PE=1 SV=1; Isoform 2 of Syntaxin-binding protein 4 OS=Mus musculus OX=10090 GN=Stxbp4; Syntaxin-binding protein 4 OS=Mus musculus OX=10090 GN=Stxbp4 PE=1 SV=1; 3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus OX=10090 GN=Acaa1a PE=1 SV=1; MKIAA0179 protein (Fragment) OS=Mus musculus OX=10090 GN=Rrp1b PE=2 SV=1; 3-ketoacyl-CoA thiolase A, peroxisomal (Fragment) OS=Mus musculus OX=10090 GN=Acaa1a PE=1 SV=1" 0 2 2 0.05 0 1 1 3 588.86597 1176.72466 1176.72401 0.55 0.00032 0/0 0 0 17334312 HCD 30 MS2 70.03223 1420.6 55.645 80.0573 24937 24937 24931 QEplus033719.raw F4 1332.3 1247.6 1592.3 1190.1 1673.8 1487.2 350 1.8 1 FALSE 0.003575 0.06851 0.092 -250 127412 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VDPSCPFSR [R].vDPScPFSR.[N] N-Term(TMT6plex); C5(Carbamidomethyl) 5 Q3ULW8 Protein mono-ADP-ribosyltransferase PARP3 OS=Mus musculus OX=10090 GN=Parp3 PE=2 SV=1 Q3ULW8-2; A0A5H1ZRP0; Q3ULW8; A0A5H1ZRL8; A0A5H1ZRL5 Isoform 2 of Protein mono-ADP-ribosyltransferase PARP3 OS=Mus musculus OX=10090 GN=Parp3; Poly [ADP-ribose] polymerase (Fragment) OS=Mus musculus OX=10090 GN=Parp3 PE=1 SV=1; Protein mono-ADP-ribosyltransferase PARP3 OS=Mus musculus OX=10090 GN=Parp3 PE=2 SV=1; Protein mono-ADP-ribosyltransferase PARP3 (Fragment) OS=Mus musculus OX=10090 GN=Parp3 PE=1 SV=1; Protein mono-ADP-ribosyltransferase PARP3 (Fragment) OS=Mus musculus OX=10090 GN=Parp3 PE=1 SV=1 0 2 2 0.6157 0 1 1 1 647.32776 1293.64824 1293.64589 1.82 0.00118 0/0 0 0 8604891 HCD 30 MS2 0 636.4 110 80.0668 24941 24941 24931 QEplus033719.raw F4 665 417.8 691.5 601.9 610.9 831.2 128 2.55 1 FALSE 1.14E-05 0.0009287 0.669 -250 127430 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KYNWSAK [R].kYNWSAk.[A] N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex) 1 Q9D823 60S ribosomal protein L37 OS=Mus musculus OX=10090 GN=Rpl37 PE=1 SV=3 Q9D823 60S ribosomal protein L37 OS=Mus musculus OX=10090 GN=Rpl37 PE=1 SV=3 1 3 3 0.4921 0 1 1 1 528.65576 1583.95273 1583.95127 0.92 0.00049 0/0 0 0 22903194 HCD 30 MS2 14.14445 1069.5 66.423 80.0789 24945 24945 24942 QEplus033719.raw F4 930.8 1130.9 1294.4 988.6 1048.1 1023.9 312 3.15 1 FALSE 5.44E-05 0.002101 0.594 -250 127449 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QYQVLK [K].qYQVLk.[Q] N-Term(TMT6plex); K6(TMT6plex) 1 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 Q99PV0 Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2 0 2 2 0.2437 0 1 1 1 618.89233 1236.77739 1236.77163 4.66 0.00288 0/0 0 0 5448396 HCD 30 MS2 63.68621 1150 110 80.0912 24950 24950 24942 QEplus033719.raw F4 1098 1010.3 1234.2 968.9 1378.8 1210.1 143 1.97 1 FALSE 0.00455 0.08082 0.059 -250 127458 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SYDDAESLK [K].sYDDAESLk.[T] N-Term(TMT6plex); K9(TMT6plex) 1 Q64511 DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2 Q64511 DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2 0 2 2 0.5421 0 1 1 1 743.39813 1485.78899 1485.78371 3.55 0.00264 0/0 0 0 5186210 HCD 30 MS2 40.83018 482.7 110 80.0937 24951 24951 24942 QEplus033719.raw F4 457.6 443 565.4 380.5 559.5 490.4 276 3.21 1 FALSE 1.14E-05 5.66E-05 0.904 -250 127469 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous MSYCYAK [R].mSYcYAk.[F] N-Term(TMT6plex); C4(Carbamidomethyl); K7(TMT6plex) 2 Q61554 Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 O88840; Q61554 Mutant fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=2 SV=1; Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2 0 2 2 0.6487 0 1 1 1 690.85608 1380.70488 1380.7056 -0.52 -0.00036 0/0 0 0 11043122 HCD 30 MS2 0 888.9 110 80.1033 24954 24954 24953 QEplus033719.raw F4 715.1 682.6 1146.6 1203.5 498.1 1087.8 195 3.16 1 FALSE 0.0005373 0.008222 0.435 -250 127481 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLEQLKPR [K].kLEQLkPR.[A] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 16 A0A1L1SQ51; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1;Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 Q71LX4; Q68FD6; A0A1L1SRI1; Q80TM2; A0A1L1SQ51; B2RY15; Q9CS79; Q6PB69; Q8CHG4; Q8CDM9; A0A1L1SQP9; Q0V930; Q3UHS6; Q3TBC3; E9PUM4; P26039 Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=3; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; MKIAA1027 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=4; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln2 protein OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Tln2 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; MKIAA0320 protein (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-2 (Fragment) OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Tln1 protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; I/LWEQ domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Tln1 PE=2 SV=1; Talin-2 OS=Mus musculus OX=10090 GN=Tln2 PE=1 SV=1; Talin-1 OS=Mus musculus OX=10090 GN=Tln1 PE=1 SV=2 1 4 4 0.5887 0 1 1 1 425.53549 1699.12014 1699.11974 0.24 0.0001 0/0 0 0 26588168 HCD 30 MS2 13.177 815.5 64.723 80.108 24956 24956 24953 QEplus033719.raw F4 825 754.1 896 615.4 999 803.3 72 2.82 2 FALSE 1.14E-05 0.0002758 0.773 -250 127488 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ALIQCAK [R].aLIQcAk.[D] N-Term(TMT6plex); C5(Carbamidomethyl); K7(TMT6plex) 1 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 Q64727 Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4 0 2 2 0.4949 0 1 1 1 631.38928 1261.77129 1261.77025 0.82 0.00052 0/0 0 0 17126928 HCD 30 MS2 27.7403 1299.8 110 80.1105 24957 24957 24953 QEplus033719.raw F4 1369.7 1016.8 1421.7 1147.6 1343.9 1499.3 435 2.95 1 FALSE 0.0002019 0.004202 0.522 -250 127514 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous IEHLYK [R].iEHLYk.[N] N-Term(TMT6plex); K6(TMT6plex) 1 Q8K0C9 "GDP-mannose 4,6 dehydratase OS=Mus musculus OX=10090 GN=Gmds PE=1 SV=1" Q8K0C9 "GDP-mannose 4,6 dehydratase OS=Mus musculus OX=10090 GN=Gmds PE=1 SV=1" 0 3 3 0.4596 0 1 1 1 420.9288 1260.77185 1260.77163 0.18 0.00007 0/0 0 0 8425173 HCD 30 MS2 15.36264 530.2 110 80.1175 24960 24960 24953 QEplus033719.raw F4 520.7 515.7 603.5 352.8 606.2 582.3 525 2.85 1 FALSE 0.001318 0.01816 0.298 -250 127526 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GIPNVLRR [K].gIPNVLRR.[T] N-Term(TMT6plex) 1 Q9CQ69 Cytochrome b-c1 complex subunit 8 OS=Mus musculus OX=10090 GN=Uqcrq PE=1 SV=3 Q9CQ69 Cytochrome b-c1 complex subunit 8 OS=Mus musculus OX=10090 GN=Uqcrq PE=1 SV=3 1 3 3 0.5627 0 1 1 1 385.25101 1153.73847 1153.73669 1.54 0.00059 0/0 0 0 4105508 HCD 30 MS2 0 290.3 110 80.1225 24962 24962 24953 QEplus033719.raw F4 282.9 231 334.3 274.2 276.4 342.8 63 3.11 1 FALSE 0.001222 0.01653 0.315 -250 127554 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EREQQDLEFAK [R].eREQQDLEFAk.[E] N-Term(TMT6plex); K11(TMT6plex) 4 Q3ULJ5 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 Q3ULJ5; Q3U5M8; P14685; Q8BK46 PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1; 26S proteasome non-ATPase regulatory subunit 3 OS=Mus musculus OX=10090 GN=Psmd3 PE=1 SV=3; PCI domain-containing protein OS=Mus musculus OX=10090 GN=Psmd3 PE=2 SV=1 1 3 3 0.5332 0 1 1 1 617.67236 1851.00254 1851.00125 0.7 0.00043 0/0 0 0 6246829.5 HCD 30 MS2 48.91632 786.3 110 80.1346 24966 24966 24964 QEplus033719.raw F4 795.1 673.1 887.4 682.4 812 867.5 451 4.22 1 FALSE 1.14E-05 2.79E-09 1.723 -250 127561 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KLENLK [K].kLENLk.[S] N-Term(TMT6plex); K1(TMT6plex); K6(TMT6plex) 5 O35381 Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 Q64G17; F6UFG6; D3YYE1; D3Z7M9; O35381 Putative acidic leucine-rich nuclear phosphoprotein 32 family member C OS=Mus musculus OX=10090 GN=Anp32c PE=2 SV=3; Acidic leucine-rich nuclear phosphoprotein 32 family member A (Fragment) OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A (Fragment) OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1; Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Mus musculus OX=10090 GN=Anp32a PE=1 SV=1 1 2 2 0.1649 0 1 1 1 716.47778 1431.94829 1431.95021 -1.34 -0.00096 0/0 0 0 6621974 HCD 30 MS2 44.81692 889.7 110 80.1371 24967 24967 24964 QEplus033719.raw F4 960.6 809.5 891.9 727.2 1114.5 834.7 400 1.88 1 FALSE 0.007252 0.1158 -0.033 -250 127585 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AWVSVTNNCNR [K].aWVSVTNNcNR.[L] N-Term(TMT6plex); C9(Carbamidomethyl) 6 A2ASS6; A0A5K1VVQ9 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1;Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 E9Q8K5; A2ASS6; A0A5K1VVQ9; A0A5K1VVQ1; A2ASS6-2; E9Q8N1 Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1; Isoform 2 of Titin OS=Mus musculus OX=10090 GN=Ttn; Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1 0 2 2 0.7177 0 1 1 1 775.39227 1549.77727 1549.77428 1.93 0.0015 0/0 0 0 3841676.25 HCD 30 MS2 0 313.6 110 80.1446 24970 24970 24964 QEplus033719.raw F4 328.5 189 275 409.9 295.5 383.9 165 3.33 2 FALSE 1.14E-05 2.55E-08 1.54 -250 127610 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous ETGVDLTK [R].eTGVDLTk.[D] N-Term(TMT6plex); K8(TMT6plex) 1 P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" P38647 "Stress-70 protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspa9 PE=1 SV=3" 0 2 2 0.489 0 1 1 1 660.89319 1320.7791 1320.7775 1.21 0.0008 0/0 0 0 68585040 HCD 30 MS2 3.438898 928.3 21.52 80.1519 24973 24973 24964 QEplus033719.raw F4 867.2 756.9 1059.1 943.5 874.9 1067.9 354 2.72 1 FALSE 4.43E-05 0.001426 0.63 -250 127624 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FLEQQNK [R].fLEQQNk.[LVAIM] N-Term(TMT6plex); K7(TMT6plex) 62 Q3TWV0; Q3UV17; Q3TFD9 "Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Keratin, type II cytoskeletal 2 oral OS=Mus musculus OX=10090 GN=Krt76 PE=1 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1" P78385; Q4L0E6; P03995; Q3KNV1; Q05B38; A4IF59; P12035; A0A0A6YWC8; Q9NSB2; Q61726; Q3TWV0; P03995-2; A2AKJ2; Q61726; O95678; A0A6B9SLG6; Q3U6S1; P02538; Q0VDM9; Q3UD36; Q5XKE5; Q6IMF0; E9Q1Z0; P50446; Q3UV11; Q9ERE2; Q99M73; P78386; Q8BGZ7; Q8VED5; Q5XQN5; P48668; P07744; Q6ISB0; P11679; P97861; Q9Z2T6; Q01546; O43790; Q3UAX1; H-INV:HIT000292931; P08729; Q148Q7; Q3V2S4; Q3UV17; Q8N1N4-2; Q9DCV7; Q8BIS2; Q0VDN0; Q0VDR7; A1L0X5; P04259; Q9Z331; Q14533; Q6IFT3; Q3TFD9; P05787; Q922U2; Q6NT21; Q5FWJ3; P13647; E9Q0F0 "SWISS-PROT:P78385 Keratin, type II cuticular Hb3 (Hair keratin, type II Hb3) - Homo sapiens (Human).; Type II cytokeratin Kb40 (Fragment) OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; Glial fibrillary acidic protein OS=Mus musculus OX=10090 GN=Gfap PE=1 SV=4; TREMBL:Q3KNV1;Q96GE1 Tax_Id=9606 Gene_Symbol=KRT7 keratin 7; Krt6b protein (Fragment) OS=Mus musculus OX=10090 GN=Krt6b PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:P12035 Tax_Id=9606 Gene_Symbol=KRT3 Keratin, type II cytoskeletal 3; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; SWISS-PROT:Q9NSB2 Keratin, type II cuticular Hb4 (Hair keratin, type II Hb4) - Homo sapiens (Human).; TREMBL:Q61726 Tax_Id=10090 Gene_Symbol=5430421N21Rik Keratin type II; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Isoform 2 of Glial fibrillary acidic protein OS=Mus musculus OX=10090 GN=Gfap; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Keratin type II (Fragment) OS=Mus musculus OX=10090 GN=Krt83 PE=2 SV=1; SWISS-PROT:O95678 Tax_Id=9606 Gene_Symbol=KRT75 Keratin, type II cytoskeletal 75; Keratin 75 splice variant OS=Mus musculus OX=10090 GN=Krt75 PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:P02538 Tax_Id=9606 Gene_Symbol=KRT6A Keratin, type II cytoskeletal 6A; Krt78 protein (Fragment) OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:Q5XKE5 Tax_Id=9606 Gene_Symbol=KRT79 Keratin, type II cytoskeletal 79; Keratin, type II cuticular 87 OS=Mus musculus OX=10090 GN=Krt87 PE=2 SV=2; Keratin 90 OS=Mus musculus OX=10090 GN=Krt90 PE=1 SV=1; SWISS-PROT:P50446 Tax_Id=10090 Gene_Symbol=Krt6a Keratin, type II cytoskeletal 6A; Keratin, type II cytoskeletal 6B OS=Mus musculus OX=10090 GN=Krt6b PE=1 SV=1; Keratin, type II cuticular Hb1 OS=Mus musculus OX=10090 GN=Krt81 PE=2 SV=2; Keratin, type II cuticular Hb4 OS=Mus musculus OX=10090 GN=Krt84 PE=2 SV=2; SWISS-PROT:P78386 Keratin, type II cuticular Hb5 (Hair keratin, type II Hb5) - Homo sapiens (Human).; TREMBL:Q8BGZ7;Q99MH7 Tax_Id=10090 Gene_Symbol=Krt75 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732475I03 product:CYTOKERATIN homolog; TREMBL:Q8VED5 Tax_Id=10090 Gene_Symbol=Krt79 Keratin 79; SWISS-PROT:Q5XQN5 (Bos taurus) Keratin, type II cytoskeletal 5; SWISS-PROT:P48668 Tax_Id=9606 Gene_Symbol=KRT6C Keratin, type II cytoskeletal 6C; SWISS-PROT:P07744 Tax_Id=10090 Gene_Symbol=Krt4 Keratin, type II cytoskeletal 4; TREMBL:Q6ISB0 Keratin, hair, basic, 4 - Homo sapiens (Human).; Keratin, type II cytoskeletal 8 OS=Mus musculus OX=10090 GN=Krt8 PE=1 SV=4; Keratin, type II cuticular Hb6 OS=Mus musculus OX=10090 GN=Krt86 PE=2 SV=2; Keratin, type II cuticular Hb5 OS=Mus musculus OX=10090 GN=Krt85 PE=1 SV=2; SWISS-PROT:Q01546 Tax_Id=9606 Gene_Symbol=KRT76 Keratin, type II cytoskeletal 2 oral; SWISS-PROT:O43790 Keratin, type II cuticular Hb6 (Hair keratin, type II Hb6) (ghHb6) - Homo sapiens (Human).; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Tax_Id=9606 Gene_Symbol=- Similar to Keratin, type II cytoskeletal 8; SWISS-PROT:P08729 Tax_Id=9606 Gene_Symbol=KRT7 Keratin, type II cytoskeletal 7; IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Krt90 PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Keratin, type II cytoskeletal 2 oral OS=Mus musculus OX=10090 GN=Krt76 PE=1 SV=1; SWISS-PROT:Q8N1N4-2 Tax_Id=9606 Gene_Symbol=KRT78 Isoform 2 of Keratin, type II cytoskeletal 78; SWISS-PROT:Q9DCV7 Tax_Id=10090 Gene_Symbol=Krt7 Keratin, type II cytoskeletal 7; IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Krt90 PE=2 SV=1; Krt78 protein (Fragment) OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; Krt6b protein OS=Mus musculus OX=10090 GN=Krt6b PE=2 SV=1; Krt78 protein (Fragment) OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; SWISS-PROT:P04259 Tax_Id=9606 Gene_Symbol=KRT6B Keratin, type II cytoskeletal 6B; Keratin, type II cytoskeletal 6B OS=Mus musculus OX=10090 GN=Krt6b PE=1 SV=3; SWISS-PROT:Q14533 Keratin, type II cuticular Hb1 (Hair keratin, type II Hb1) (ghHKb1) (ghHb1) (MLN 137) - Homo sapiens (Human).; Keratin Kb40 OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:P05787 Tax_Id=9606 Gene_Symbol=KRT8 Keratin, type II cytoskeletal 8; SWISS-PROT:Q922U2 Tax_Id=10090 Gene_Symbol=Krt5 Keratin, type II cytoskeletal 5; TREMBL:Q6NT21 Keratin, hair, basic, 3 - Homo sapiens (Human).; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; SWISS-PROT:P13647 Tax_Id=9606 Gene_Symbol=KRT5 Keratin, type II cytoskeletal 5; Keratin 78 OS=Mus musculus OX=10090 GN=Krt78 PE=1 SV=1" 0 2 2 0.3117 0 1 1 1 682.90051 1364.79375 1364.79382 -0.05 -0.00004 0/0 0 0 719413312 HCD 30 MS2 5.060147 927.8 2.812 80.1617 24976 24976 24975 QEplus033719.raw F4 843.1 986.1 1025.6 601.4 1247.1 863.3 448 2.31 3 TRUE 0.007474 0.1216 -0.045 -250 127631 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FLEQQNK [R].fLEQQNk.[LVAIM] N-Term(TMT6plex); K7(TMT6plex) 62 Q3TWV0; Q3UV17; Q3TFD9 "Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1;Keratin, type II cytoskeletal 2 oral OS=Mus musculus OX=10090 GN=Krt76 PE=1 SV=1;Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1" P78385; Q4L0E6; P03995; Q3KNV1; Q05B38; A4IF59; P12035; A0A0A6YWC8; Q9NSB2; Q61726; Q3TWV0; P03995-2; A2AKJ2; Q61726; O95678; A0A6B9SLG6; Q3U6S1; P02538; Q0VDM9; Q3UD36; Q5XKE5; Q6IMF0; E9Q1Z0; P50446; Q3UV11; Q9ERE2; Q99M73; P78386; Q8BGZ7; Q8VED5; Q5XQN5; P48668; P07744; Q6ISB0; P11679; P97861; Q9Z2T6; Q01546; O43790; Q3UAX1; H-INV:HIT000292931; P08729; Q148Q7; Q3V2S4; Q3UV17; Q8N1N4-2; Q9DCV7; Q8BIS2; Q0VDN0; Q0VDR7; A1L0X5; P04259; Q9Z331; Q14533; Q6IFT3; Q3TFD9; P05787; Q922U2; Q6NT21; Q5FWJ3; P13647; E9Q0F0 "SWISS-PROT:P78385 Keratin, type II cuticular Hb3 (Hair keratin, type II Hb3) - Homo sapiens (Human).; Type II cytokeratin Kb40 (Fragment) OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; Glial fibrillary acidic protein OS=Mus musculus OX=10090 GN=Gfap PE=1 SV=4; TREMBL:Q3KNV1;Q96GE1 Tax_Id=9606 Gene_Symbol=KRT7 keratin 7; Krt6b protein (Fragment) OS=Mus musculus OX=10090 GN=Krt6b PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:P12035 Tax_Id=9606 Gene_Symbol=KRT3 Keratin, type II cytoskeletal 3; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; SWISS-PROT:Q9NSB2 Keratin, type II cuticular Hb4 (Hair keratin, type II Hb4) - Homo sapiens (Human).; TREMBL:Q61726 Tax_Id=10090 Gene_Symbol=5430421N21Rik Keratin type II; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Isoform 2 of Glial fibrillary acidic protein OS=Mus musculus OX=10090 GN=Gfap; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=1 SV=2; Keratin type II (Fragment) OS=Mus musculus OX=10090 GN=Krt83 PE=2 SV=1; SWISS-PROT:O95678 Tax_Id=9606 Gene_Symbol=KRT75 Keratin, type II cytoskeletal 75; Keratin 75 splice variant OS=Mus musculus OX=10090 GN=Krt75 PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:P02538 Tax_Id=9606 Gene_Symbol=KRT6A Keratin, type II cytoskeletal 6A; Krt78 protein (Fragment) OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; Vimentin (Fragment) OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:Q5XKE5 Tax_Id=9606 Gene_Symbol=KRT79 Keratin, type II cytoskeletal 79; Keratin, type II cuticular 87 OS=Mus musculus OX=10090 GN=Krt87 PE=2 SV=2; Keratin 90 OS=Mus musculus OX=10090 GN=Krt90 PE=1 SV=1; SWISS-PROT:P50446 Tax_Id=10090 Gene_Symbol=Krt6a Keratin, type II cytoskeletal 6A; Keratin, type II cytoskeletal 6B OS=Mus musculus OX=10090 GN=Krt6b PE=1 SV=1; Keratin, type II cuticular Hb1 OS=Mus musculus OX=10090 GN=Krt81 PE=2 SV=2; Keratin, type II cuticular Hb4 OS=Mus musculus OX=10090 GN=Krt84 PE=2 SV=2; SWISS-PROT:P78386 Keratin, type II cuticular Hb5 (Hair keratin, type II Hb5) - Homo sapiens (Human).; TREMBL:Q8BGZ7;Q99MH7 Tax_Id=10090 Gene_Symbol=Krt75 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732475I03 product:CYTOKERATIN homolog; TREMBL:Q8VED5 Tax_Id=10090 Gene_Symbol=Krt79 Keratin 79; SWISS-PROT:Q5XQN5 (Bos taurus) Keratin, type II cytoskeletal 5; SWISS-PROT:P48668 Tax_Id=9606 Gene_Symbol=KRT6C Keratin, type II cytoskeletal 6C; SWISS-PROT:P07744 Tax_Id=10090 Gene_Symbol=Krt4 Keratin, type II cytoskeletal 4; TREMBL:Q6ISB0 Keratin, hair, basic, 4 - Homo sapiens (Human).; Keratin, type II cytoskeletal 8 OS=Mus musculus OX=10090 GN=Krt8 PE=1 SV=4; Keratin, type II cuticular Hb6 OS=Mus musculus OX=10090 GN=Krt86 PE=2 SV=2; Keratin, type II cuticular Hb5 OS=Mus musculus OX=10090 GN=Krt85 PE=1 SV=2; SWISS-PROT:Q01546 Tax_Id=9606 Gene_Symbol=KRT76 Keratin, type II cytoskeletal 2 oral; SWISS-PROT:O43790 Keratin, type II cuticular Hb6 (Hair keratin, type II Hb6) (ghHb6) - Homo sapiens (Human).; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Tax_Id=9606 Gene_Symbol=- Similar to Keratin, type II cytoskeletal 8; SWISS-PROT:P08729 Tax_Id=9606 Gene_Symbol=KRT7 Keratin, type II cytoskeletal 7; IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Krt90 PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; Keratin, type II cytoskeletal 2 oral OS=Mus musculus OX=10090 GN=Krt76 PE=1 SV=1; SWISS-PROT:Q8N1N4-2 Tax_Id=9606 Gene_Symbol=KRT78 Isoform 2 of Keratin, type II cytoskeletal 78; SWISS-PROT:Q9DCV7 Tax_Id=10090 Gene_Symbol=Krt7 Keratin, type II cytoskeletal 7; IF rod domain-containing protein OS=Mus musculus OX=10090 GN=Krt90 PE=2 SV=1; Krt78 protein (Fragment) OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; Krt6b protein OS=Mus musculus OX=10090 GN=Krt6b PE=2 SV=1; Krt78 protein (Fragment) OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; SWISS-PROT:P04259 Tax_Id=9606 Gene_Symbol=KRT6B Keratin, type II cytoskeletal 6B; Keratin, type II cytoskeletal 6B OS=Mus musculus OX=10090 GN=Krt6b PE=1 SV=3; SWISS-PROT:Q14533 Keratin, type II cuticular Hb1 (Hair keratin, type II Hb1) (ghHKb1) (ghHb1) (MLN 137) - Homo sapiens (Human).; Keratin Kb40 OS=Mus musculus OX=10090 GN=Krt78 PE=2 SV=1; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=2 SV=1; SWISS-PROT:P05787 Tax_Id=9606 Gene_Symbol=KRT8 Keratin, type II cytoskeletal 8; SWISS-PROT:Q922U2 Tax_Id=10090 Gene_Symbol=Krt5 Keratin, type II cytoskeletal 5; TREMBL:Q6NT21 Keratin, hair, basic, 3 - Homo sapiens (Human).; Vimentin OS=Mus musculus OX=10090 GN=Vim PE=1 SV=1; SWISS-PROT:P13647 Tax_Id=9606 Gene_Symbol=KRT5 Keratin, type II cytoskeletal 5; Keratin 78 OS=Mus musculus OX=10090 GN=Krt78 PE=1 SV=1" 0 3 3 0.345 0 1 1 1 455.60297 1364.79435 1364.79382 0.38 0.00017 0/0 0 0 291280576 HCD 30 MS2 9.240761 398.9 4.44 80.1639 24977 24977 24975 QEplus033719.raw F4 371 432.2 436.8 267.6 512 373.5 456 2.29 3 TRUE 0.006003 0.09914 0.009 -250 127643 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GLVPEDDTK [K].gLVPEDDTk.[E] N-Term(TMT6plex); K9(TMT6plex) 2 Q8K4Z5 Splicing factor 3A subunit 1 OS=Mus musculus OX=10090 GN=Sf3a1 PE=1 SV=1 Q3TVM1; Q8K4Z5 Uncharacterized protein OS=Mus musculus OX=10090 GN=Sf3a1 PE=2 SV=1; Splicing factor 3A subunit 1 OS=Mus musculus OX=10090 GN=Sf3a1 PE=1 SV=1 0 2 2 0.2416 0 1 1 1 716.4032 1431.79912 1431.80953 -7.27 -0.00521 0/0 0 0 8198181.5 HCD 30 MS2 38.06988 953.1 110 80.1687 24979 24979 24975 QEplus033719.raw F4 1007.9 903.9 990.3 747.6 1212.7 856.3 374 2.69 1 FALSE 0.001591 0.02449 0.248 -250 127651 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVVDYTTAK [K].kVVDYTTAk.[E] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 5 Q0PD67 Rab1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1 Q5SW87; Q0PD67; Q3UB66; Q5SW88; Q6ZPF0 "RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; Rab1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab1a PE=2 SV=1; RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; MKIAA3012 protein (Fragment) OS=Mus musculus OX=10090 GN=Rab1a PE=2 SV=1" 1 2 2 0.5102 0 1 1 1 856.5318 1712.05632 1712.05613 0.11 0.00009 0/0 0 0 4200433 HCD 30 MS2 0 312.2 110 80.1713 24980 24980 24975 QEplus033719.raw F4 296.1 257.5 367.5 250.2 379.4 322.7 212 3.43 1 FALSE 1.14E-05 4.52E-06 1.113 -250 127660 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TSSVGPGAGAGSVMGCTEAR [R].tSSVGPGAGAGSVMGcTEAR.[R] N-Term(TMT6plex); C16(Carbamidomethyl) 3 Q7TNT6 Gas1 protein (Fragment) OS=Mus musculus OX=10090 GN=Gas1 PE=2 SV=1 Q7TNT6; A0A286YD87; Q01721 Gas1 protein (Fragment) OS=Mus musculus OX=10090 GN=Gas1 PE=2 SV=1; Growth arrest-specific protein 1 OS=Mus musculus OX=10090 GN=Gas1 PE=1 SV=1; Growth arrest-specific protein 1 OS=Mus musculus OX=10090 GN=Gas1 PE=1 SV=2 0 3 3 0.8062 0 1 1 1 694.33618 2080.99399 2080.9953 -0.63 -0.00044 0/0 0 0 2944064.75 HCD 30 MS2 14.95729 212.7 110 80.1738 24981 24981 24975 QEplus033719.raw F4 198 181.1 243.5 176.6 245.5 231.2 110 6.5 1 FALSE 1.14E-05 6.31E-16 2.993 -250 127675 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDAPQPDVKDEEGKEEEK [K].tDAPQPDVkDEEGkEEEk.[N] N-Term(TMT6plex); K9(TMT6plex); K14(TMT6plex); K18(TMT6plex) 2 Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 Q3TXE5; Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 2 4 4 0.6376 0 1 1 1 740.90259 2960.58852 2960.58703 0.5 0.00037 0/0 0 0 30790396 HCD 30 MS2 32.31144 569.7 31.485 80.1785 24983 24983 24975 QEplus033719.raw F4 502.8 455 698.6 499.6 586.6 675.4 529 2.87 1 FALSE 1.14E-05 2.41E-09 1.734 -250 127702 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous KVVDYTTAK [K].kVVDYTTAk.[E] N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex) 5 Q0PD67 Rab1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1 Q5SW87; Q0PD67; Q3UB66; Q5SW88; Q6ZPF0 "RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; Rab1A OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Rab1a PE=2 SV=1; RAB1A, member RAS oncogene family OS=Mus musculus OX=10090 GN=Rab1a PE=1 SV=1; MKIAA3012 protein (Fragment) OS=Mus musculus OX=10090 GN=Rab1a PE=2 SV=1" 1 3 3 0.6393 0 1 1 1 571.35742 1712.05771 1712.05613 0.92 0.00053 0/0 0 0 59932056 HCD 30 MS2 11.34213 1027.7 30.446 80.1953 24989 24989 24986 QEplus033719.raw F4 1015.5 931.3 1209.5 855.8 1126.5 1027.3 206 4.38 1 FALSE 1.14E-05 1.58E-08 1.58 -250 127725 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GEGGTTNPHVFPEGSEPK [R].gEGGTTNPHVFPEGSEPk.[V] N-Term(TMT6plex); K18(TMT6plex) 2 Q7TQI3 Ubiquitin thioesterase OTUB1 OS=Mus musculus OX=10090 GN=Otub1 PE=1 SV=2 D3YWF6; Q7TQI3 Ubiquitinyl hydrolase 1 OS=Mus musculus OX=10090 GN=Otub1 PE=1 SV=1; Ubiquitin thioesterase OTUB1 OS=Mus musculus OX=10090 GN=Otub1 PE=1 SV=2 0 3 3 0.779 0 1 1 1 766.73151 2298.17997 2298.17665 1.44 0.00111 0/0 0 0 5091133.5 HCD 30 MS2 0 223.2 110 80.2023 24992 24992 24986 QEplus033719.raw F4 230.4 192.9 243.4 214.6 220.6 237.3 356 5.61 1 FALSE 1.14E-05 3.32E-13 2.468 -250 127733 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HELIEFR [K].hELIEFR.[R] N-Term(TMT6plex) 7 Q80U89 MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2 F6Z1R4; Q80U89; Q68FD5; Q5SXR6; Q3UPJ3; Q3TJ98; Q8K2I5 Clathrin heavy chain 1 (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; MKIAA0034 protein (Fragment) OS=Mus musculus OX=10090 GN=mKIAA0034 PE=3 SV=2; Clathrin heavy chain 1 OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=3; Clathrin heavy chain OS=Mus musculus OX=10090 GN=Cltc PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1; Cltc protein (Fragment) OS=Mus musculus OX=10090 GN=Cltc PE=2 SV=1 0 3 3 0.548 0 1 1 1 391.55917 1172.66297 1172.66252 0.38 0.00015 0/0 0 0 4592216.5 HCD 30 MS2 79.38155 559.6 110 80.2073 24994 24994 24986 QEplus033719.raw F4 611.6 415.2 564.2 338.7 650.9 776.9 316 3.23 1 FALSE 0.0001603 0.003778 0.534 -250 127746 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VVDRDSEEAEVIRK [K].vVDRDSEEAEVIRk.[Y] N-Term(TMT6plex); K14(TMT6plex) 9 Q3TX36 Poly [ADP-ribose] polymerase OS=Mus musculus OX=10090 GN=Parp1 PE=2 SV=1 Q3TX36; Q3TIV3; P11103-2; Q3TF18; P11103; Q3TM68; Q3UJ03; Q3U868; Q921K2 Poly [ADP-ribose] polymerase OS=Mus musculus OX=10090 GN=Parp1 PE=2 SV=1; Poly [ADP-ribose] polymerase OS=Mus musculus OX=10090 GN=Parp1 PE=2 SV=1; Isoform 2 of Poly [ADP-ribose] polymerase 1 OS=Mus musculus OX=10090 GN=Parp1; Poly [ADP-ribose] polymerase OS=Mus musculus OX=10090 GN=Parp1 PE=2 SV=1; Poly [ADP-ribose] polymerase 1 OS=Mus musculus OX=10090 GN=Parp1 PE=1 SV=3; Poly [ADP-ribose] polymerase OS=Mus musculus OX=10090 GN=Parp1 PE=2 SV=1; Poly [ADP-ribose] polymerase OS=Mus musculus OX=10090 GN=Parp1 PE=2 SV=1; Poly [ADP-ribose] polymerase (Fragment) OS=Mus musculus OX=10090 GN=Parp1 PE=2 SV=1; Poly [ADP-ribose] polymerase OS=Mus musculus OX=10090 GN=Parp1 PE=1 SV=1 2 4 4 0.4581 0 1 1 1 526.55066 2103.18081 2103.181 -0.09 -0.00005 0/0 0 0 12304908 HCD 30 MS2 60.30154 1106.8 110 80.2121 24996 24996 24986 QEplus033719.raw F4 1534.8 716.5 886.5 931.3 1464.1 1107.7 473 1.79 1 FALSE 0.001997 0.03516 0.193 -250 127763 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous AILGSVER [R].aILGSVER.[M] N-Term(TMT6plex) 4 Q9D0R2 "Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2" Q3U630; Q9D0R2; Q8BLY2; Q99KJ4 "Threonyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1; Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2; Threonine--tRNA ligase 2, cytoplasmic OS=Mus musculus OX=10090 GN=Tars3 PE=1 SV=1; Threonyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Tars PE=2 SV=1" 0 2 2 0.4242 0 1 1 1 537.32941 1073.65154 1073.65162 -0.08 -0.00004 0/0 0 0 47918460 HCD 30 MS2 38.17061 805.7 23.433 80.2239 25000 25000 24997 QEplus033719.raw F4 755.2 710.2 984.6 673.9 791.2 919 160 2.64 1 FALSE 5.44E-05 0.001795 0.609 -250 127787 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous RTALVANTSNMPVAAR [K].rTALVANTSNMPVAAR.[E] N-Term(TMT6plex) 2 P50516 V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a PE=1 SV=2 P50516; P50516-2 V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a PE=1 SV=2; Isoform 2 of V-type proton ATPase catalytic subunit A OS=Mus musculus OX=10090 GN=Atp6v1a 1 3 3 0.7229 0 1 1 1 634.35712 1901.0568 1901.05883 -1.07 -0.00068 0/0 0 0 6505642.5 HCD 30 MS2 26.3968 417.6 110 80.2337 25004 25004 24997 QEplus033719.raw F4 408.7 280.8 445.5 446.2 393.2 531.2 439 6.28 1 FALSE 1.14E-05 1.15E-14 2.745 -250 127792 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous LKPGAPLRPK [K].lkPGAPLRPk.[L] N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex) 6 B9EKP5 "Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1" Q3U7N9; B7FAV1; F6XC15; B9EKP5; Q8BTM8; B7FAU9 "Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin, alpha (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin-A (Fragment) OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=2 SV=1; Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5; Filamin, alpha OS=Mus musculus OX=10090 GN=Flna PE=1 SV=1" 0 4 4 0.635 0 1 1 1 441.80148 1764.1841 1764.18267 0.81 0.00036 0/0 0 0 27727612 HCD 30 MS2 22.13129 633.7 49.313 80.2359 25005 25005 24997 QEplus033719.raw F4 551.4 590.7 758.5 418.5 835.9 647.1 48 3.26 1 FALSE 0.002705 0.05399 0.131 -250 127799 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous GVSGSCNIDVVCPEGDGRR [K].gVSGScNIDVVcPEGDGRR.[D] N-Term(TMT6plex); C6(Carbamidomethyl); C12(Carbamidomethyl) 1 P15636 SWISS-PROT:P15636 Protease I precursor Lysyl endopeptidase Achromobacter lyticus. P15636 SWISS-PROT:P15636 Protease I precursor Lysyl endopeptidase Achromobacter lyticus. 1 3 3 0.8515 0 1 1 1 755.03088 2263.0781 2263.07568 1.07 0.00081 0/0 0 0 9514403 HCD 30 MS2 0 203.7 110 80.2385 25006 25006 24997 QEplus033719.raw F4 309 147.7 189 133 217.8 225.9 91 6.87 1 TRUE 1.14E-05 6.31E-16 3.465 -250 127817 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQLAALRK [K].eQLAALRk.[H] N-Term(TMT6plex); K8(TMT6plex) 2 E9PV44 ATP synthase F1 subunit epsilon OS=Mus musculus OX=10090 GN=Atpif1 PE=1 SV=1 E9PV44; O35143 "ATP synthase F1 subunit epsilon OS=Mus musculus OX=10090 GN=Atpif1 PE=1 SV=1; ATPase inhibitor, mitochondrial OS=Mus musculus OX=10090 GN=Atp5if1 PE=1 SV=2" 1 3 3 0.3906 0 1 1 1 462.96649 1386.88492 1386.88331 1.17 0.00054 0/0 0 0 25950242 HCD 30 MS2 38.91124 770.9 45.742 80.2505 25010 25010 25008 QEplus033719.raw F4 749 656.2 852.2 633 846 888.7 368 2.97 1 FALSE 0.0003211 0.006216 0.474 -250 127823 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EAIICK [R].eAIIck.[N] N-Term(TMT6plex); C5(Carbamidomethyl); K6(TMT6plex) 8 O88844 Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2 Q3TJ51; Q0QER9; O88844; Q5HZJ8; A0A087WPT4; A0A087WRS9; D3YVY3; Q8C338 Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; IDP (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=2; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] cytoplasmic (Fragment) OS=Mus musculus OX=10090 GN=Idh1 PE=1 SV=1; Isocitrate dehydrogenase [NADP] OS=Mus musculus OX=10090 GN=Idh1 PE=2 SV=1 0 2 2 0.4202 0 1 1 1 596.36249 1191.7177 1191.71715 0.46 0.00027 0/0 0 0 55653620 HCD 30 MS2 10.03019 1065.1 27.843 80.2528 25011 25011 25008 QEplus033719.raw F4 1014 1050.9 1269.2 837.3 1145.9 1073.3 417 2.38 1 FALSE 0.004022 0.07438 0.076 -250 127851 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QISDLK [KR].qISDLk.[LF] N-Term(TMT6plex); K6(TMT6plex) 6 A0A087WPK3 Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=1 Q8BLV4; E9Q9T1; A0A087WPK3; Q3UZ39-2; A6H5U5; G5E8E1 Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Lrrfip1 PE=2 SV=2; Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=2; Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=1; Isoform 2 of Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1; Lrrfip1 protein OS=Mus musculus OX=10090 GN=Lrrfip1 PE=2 SV=1; Leucine-rich repeat flightless-interacting protein 1 OS=Mus musculus OX=10090 GN=Lrrfip1 PE=1 SV=1 0 2 2 0.1953 0 1 1 1 581.36761 1161.72795 1161.72434 3.11 0.0018 0/0 0 0 10475528 HCD 30 MS2 34.26316 1197.2 110 80.2649 25016 25016 25008 QEplus033719.raw F4 1263.1 854.7 1292.2 1065.9 1239.6 1467.6 514 2.15 1 FALSE 0.002886 0.05695 0.122 -250 127852 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous QLSDLK [KR].qLSDLk.[LF] N-Term(TMT6plex); K6(TMT6plex) 4 Q9D4L8; Q497Q3; Q9R0U9; Q9D4K1 Uncharacterized protein OS=Mus musculus OX=10090 GN=Tex21 PE=2 SV=1; Testis-expressed gene 21 OS=Mus musculus OX=10090 GN=Tex21 PE=1 SV=1; Testis-expressed gene 21 OS=Mus musculus OX=10090 GN=Tex21 PE=1 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Tex21 PE=2 SV=1 0 2 2 0.1953 0 1 2 2 581.36761 1161.72795 1161.72434 3.11 0.0018 0/0 0 0 10475528 HCD 30 MS2 34.26316 1197.2 110 80.2649 25016 25016 25008 QEplus033719.raw F4 1263.1 854.7 1292.2 1065.9 1239.6 1467.6 514 2.15 1 FALSE 0.002886 0.05695 0.122 -250 127861 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous SETAPAETAAPAPVEK [-].sETAPAETAAPAPVEk.[S] N-Term(TMT6plex); K16(TMT6plex) 1 Q1WWK3 Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1 Q1WWK3 Hist1h1b protein (Fragment) OS=Mus musculus OX=10090 GN=H1f5 PE=2 SV=1 0 4 4 0.6031 0 1 1 1 507.53244 2027.10793 2027.10611 0.9 0.00046 0/0 0 0 9840327 HCD 30 MS2 35.56672 709 110 80.2674 25017 25017 25008 QEplus033719.raw F4 627.2 655.8 824.9 521.1 820.3 805 406 4.46 1 FALSE 1.14E-05 7.85E-08 1.447 -250 127868 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous TDAPQPDVKDEEGKEEEK [K].tDAPQPDVkDEEGkEEEk.[N] N-Term(TMT6plex); K9(TMT6plex); K14(TMT6plex); K18(TMT6plex) 2 Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 Q3TXE5; Q5SUC3 Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=2 SV=1; Uncharacterized protein OS=Mus musculus OX=10090 GN=Canx PE=1 SV=1 2 5 5 0.5288 0 1 1 1 592.92358 2960.58881 2960.58703 0.6 0.00036 0/0 0 0 9687438 HCD 30 MS2 16.81962 513.4 110 80.2699 25018 25018 25008 QEplus033719.raw F4 504.6 412.4 586.5 445.2 524.4 607.5 526 3.12 1 FALSE 1.14E-05 0.0001731 0.811 -250 127876 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQQLAEIETR [R].eQQLAEIETR.[R] N-Term(TMT6plex) 1 Q6GQT9 Nodal modulator 1 OS=Mus musculus OX=10090 GN=Nomo1 PE=1 SV=1 Q6GQT9 Nodal modulator 1 OS=Mus musculus OX=10090 GN=Nomo1 PE=1 SV=1 0 2 2 0.6364 0 1 1 1 723.39709 1445.78691 1445.77974 4.96 0.00359 0/0 0 0 5469163 HCD 30 MS2 17.793 438.4 110 80.2772 25020 25020 25019 QEplus033719.raw F4 432.4 353.2 466.2 408.7 472.4 497.7 374 3.74 1 FALSE 1.14E-05 2.64E-07 1.347 -250 127889 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous HEAMITDLEER [K].hEAMITDLEER.[L] N-Term(TMT6plex) 2 Q8VDD5 Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 Q3UFT0; Q8VDD5 Myosin_tail_1 domain-containing protein (Fragment) OS=Mus musculus OX=10090 GN=Myh9 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4 0 2 2 0.5256 0 1 1 1 786.89923 1572.79119 1572.78892 1.44 0.00113 0/0 0 0 5130582.5 HCD 30 MS2 0 239.4 110 80.2822 25022 25022 25019 QEplus033719.raw F4 246.6 199.1 298 158.5 280.9 253 176 3.52 1 FALSE 1.14E-05 4.92E-08 1.486 -250 127896 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous DYFMSCPNR [R].dYFMScPNR.[G] N-Term(TMT6plex); C6(Carbamidomethyl) 1 Q3SZV7 TREMBL:Q3SZV7 (Bos taurus) Similar to hemopexin Q3SZV7 TREMBL:Q3SZV7 (Bos taurus) Similar to hemopexin 0 2 2 0.8316 0 1 1 1 709.82544 1418.6436 1418.63942 2.95 0.00209 0/0 0 0 3687333 HCD 30 MS2 0 480.9 110 80.2848 25023 25023 25019 QEplus033719.raw F4 455.1 268.3 283.2 233.6 1349 296.3 18 2.97 1 TRUE 7.59E-05 0.002805 0.565 -250 127901 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous EQFAWR [K].eQFAWR.[H] N-Term(TMT6plex) 6 P63325; A0A3B2W864 "40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1;Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" A0A338P731; P63325; Q3UW83; A0A338P7K4; Q3U9P0; A0A3B2W864 "40S ribosomal protein S10 (Fragment) OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; 40S ribosomal protein S10 OS=Mus musculus OX=10090 GN=Rps10 PE=1 SV=1; S10_plectin domain-containing protein OS=Mus musculus OX=10090 GN=Rps10 PE=2 SV=1; Predicted gene, 49804 OS=Mus musculus OX=10090 GN=Gm49804 PE=3 SV=1" 0 2 2 0.4324 0 1 1 1 533.28778 1065.56828 1065.5679 0.37 0.00019 0/0 0 0 91032480 HCD 30 MS2 30.5143 900.3 14.781 80.2895 25025 25025 25019 QEplus033719.raw F4 931.6 645.5 991.1 710.9 928.2 1194.5 153 2.22 2 FALSE 0.005781 0.09671 0.016 -250 127908 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous VIDPVAPR [K].vIDPVAPR.[Y] N-Term(TMT6plex) 2 B9EIU1 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1 B9EIU1; Q8CGC7 Glutamyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Eprs PE=2 SV=1; Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus OX=10090 GN=Eprs1 PE=1 SV=4 0 2 2 0.6019 0 1 1 1 548.33868 1095.67009 1095.67236 -2.07 -0.00113 0/0 0 0 27109648 HCD 30 MS2 61.65701 798.4 33.574 80.2918 25026 25026 25019 QEplus033719.raw F4 810.5 616 857.5 676.8 892.5 937.1 61 2.16 1 FALSE 0.001125 0.01482 0.335 -250 127922 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous APCVSESQSAGAGPANAATQGK [K].aPcVSESQSAGAGPANAATQGk.[E] N-Term(TMT6plex); C3(Carbamidomethyl); K22(TMT6plex) 10 Q8C9L6; A2API8 Uncharacterized protein OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1;Paralemmin A kinase anchor protein OS=Mus musculus OX=10090 GN=Pakap PE=1 SV=1 Q69ZV5; O54931-3; O54931-4; Q8C9L6; A2API8; O54931-2; Q99L95; O54931-5; O54931; F7AA26 MKIAA0920 protein (Fragment) OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1; Isoform 3 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; Isoform 4 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; Uncharacterized protein OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1; Paralemmin A kinase anchor protein OS=Mus musculus OX=10090 GN=Pakap PE=1 SV=1; Isoform 2 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; Akap2 protein OS=Mus musculus OX=10090 GN=Pakap PE=2 SV=1; Isoform 5 of A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2; A-kinase anchor protein 2 OS=Mus musculus OX=10090 GN=Akap2 PE=1 SV=3; Paralemmin A kinase anchor protein (Fragment) OS=Mus musculus OX=10090 GN=Pakap PE=1 SV=1 0 3 3 0.8776 0 1 1 1 839.76575 2517.28269 2517.27677 2.35 0.00197 0/0 0 0 7055632.5 HCD 30 MS2 0 115 110 80.2968 25028 25028 25019 QEplus033719.raw F4 110.8 110.6 139.1 76 151.7 102 304 9.15 2 FALSE 1.14E-05 6.31E-16 3.924 -250 127927 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous FDDTNPEKEEAK [R].fDDTNPEkEEAk.[F] N-Term(TMT6plex); K8(TMT6plex); K12(TMT6plex) 6 Q8BML9 Glutamine--tRNA ligase OS=Mus musculus OX=10090 GN=Qars1 PE=1 SV=1 Q8R1V9; D3Z158; Q3TIN2; A0A140LHZ5; A0A140LIZ4; Q8BML9 Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=1 SV=2; Glutaminyl-tRNA synthetase OS=Mus musculus OX=10090 GN=Qars PE=2 SV=1; Glutaminyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutaminyl-tRNA synthetase (Fragment) OS=Mus musculus OX=10090 GN=Qars PE=1 SV=1; Glutamine--tRNA ligase OS=Mus musculus OX=10090 GN=Qars1 PE=1 SV=1 1 3 3 0.6875 0 1 1 1 704.04852 2110.13102 2110.12713 1.84 0.0013 0/0 0 0 6035213.5 HCD 30 MS2 15.60686 581.2 110 80.2993 25029 25029 25019 QEplus033719.raw F4 567.4 488.3 652.8 540.9 547 691 414 3.04 1 FALSE 1.14E-05 1.04E-05 1.044 -250 127944 FALSE High Sequest HT Sequest HT (A2) A 2 Unambiguous CNGVLEGIR [R].cNGVLEGIR.[IV] N-Term(TMT6plex); C1(Carbamidomethyl) 39 Q69ZX3; Q5SX40; P13541; Q5SX39; Q5SV64; Q8VDD5; B2RY26; P13542 MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1;Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1;Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2;Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1;Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1;Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4;Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1;Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2 Q2TAW4; Q6URW6-2; B2RWW8; Q69ZX3; Q80T68; A0A2R8VHF9; Q5SX40; P13541; Q8BLI3; Q8BWI3; Q5SX39; A0A338P6K2; G3UW82; Q3UUB1; B2RWX0; B2RQQ1; O08638-2; O08638; E9Q264; Q5SV64; Q3UH59; Q8BLW0; Q8VDD5; I6L963; B1AR69; B2RY26; Q5BKR0; A0A140LI60; Q6P8P3; Q6URW6; E9QPE7; Q8BLI1; K3W4R2; Q6URW6-3; A2AQP0; B2RXX9; Q3UQQ3; P13542; Q61879 "Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Isoform 2 of Myosin-14 OS=Mus musculus OX=10090 GN=Myh14; Myosin, heavy polypeptide 8, skeletal muscle, perinatal OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=1; MKIAA0866 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh11 PE=2 SV=1; MKIAA3005 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin-1 OS=Mus musculus OX=10090 GN=Myh1 PE=1 SV=1; Myosin-3 OS=Mus musculus OX=10090 GN=Myh3 PE=2 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-4 OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin, heavy polypeptide 2, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh2 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh4 PE=2 SV=1; Myosin, heavy polypeptide 1, skeletal muscle, adult OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin, heavy polypeptide 6, cardiac muscle, alpha OS=Mus musculus OX=10090 GN=Myh6 PE=1 SV=1; Isoform 2 of Myosin-11 OS=Mus musculus OX=10090 GN=Myh11; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=1; Myosin, heavy chain 15 OS=Mus musculus OX=10090 GN=Myh15 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh1 PE=2 SV=1; Myosin-9 OS=Mus musculus OX=10090 GN=Myh9 PE=1 SV=4; Myh2 protein OS=Mus musculus OX=10090 GN=Myh2 PE=2 SV=1; Myosin, heavy polypeptide 13, skeletal muscle OS=Mus musculus OX=10090 GN=Myh13 PE=1 SV=1; Myh7 protein OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Myh6 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin-14 (Fragment) OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Myh6 protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin-14 OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Myosin-11 OS=Mus musculus OX=10090 GN=Myh11 PE=1 SV=2; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh10 PE=2 SV=1; Myosin-14 OS=Mus musculus OX=10090 GN=Myh14 PE=1 SV=1; Isoform 3 of Myosin-14 OS=Mus musculus OX=10090 GN=Myh14; Myosin-7B OS=Mus musculus OX=10090 GN=Myh7b PE=3 SV=1; Myosin, heavy polypeptide 7, cardiac muscle, beta OS=Mus musculus OX=10090 GN=Myh7 PE=2 SV=1; Uncharacterized protein (Fragment) OS=Mus musculus OX=10090 GN=Myh6 PE=2 SV=1; Myosin-8 OS=Mus musculus OX=10090 GN=Myh8 PE=2 SV=2; Myosin-10 OS=Mus musculus OX=10090 GN=Myh10 PE=1 SV=2" 0 2 2 0.4395 0 1 1 1 623.84265 1246.67803 1246.67752 0.4 0.00025 0/0 0 0 148624512 HCD 30 MS2 8.653994 630.9 14.265 80.3089 25032 25032 25030 QEplus033719.raw F4 730.5 307.9 558.2 931.9 381.7 875 326 3.39 8 FALSE 1.14E-05 5.55E-06 1.096