diff --git a/docs/Project.toml b/docs/Project.toml index 1039e38f..477dd037 100644 --- a/docs/Project.toml +++ b/docs/Project.toml @@ -1,7 +1,6 @@ [deps] CairoMakie = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0" DiffResults = "163ba53b-c6d8-5494-b064-1a9d43ac40c5" -DifferentialEquations = "0c46a032-eb83-5123-abaf-570d42b7fbaa" Documenter = "e30172f5-a6a5-5a46-863b-614d45cd2de4" ExampleJuggler = "3bbe58f8-ed81-4c4e-a134-03e85fcf4a1a" ExtendableFEMBase = "12fb9182-3d4c-4424-8fd1-727a0899810c" @@ -14,6 +13,8 @@ LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" LinearSolve = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" Literate = "98b081ad-f1c9-55d3-8b20-4c87d4299306" Metis = "2679e427-3c69-5b7f-982b-ece356f1e94b" +OrdinaryDiffEqRosenbrock = "43230ef6-c299-4910-a778-202eb28ce4ce" +OrdinaryDiffEqSDIRK = "2d112036-d095-4a1e-ab9a-08536f3ecdbf" Pluto = "c3e4b0f8-55cb-11ea-2926-15256bba5781" PlutoSliderServer = "2fc8631c-6f24-4c5b-bca7-cbb509c42db4" SimplexGridFactory = "57bfcd06-606e-45d6-baf4-4ba06da0efd5" @@ -21,6 +22,7 @@ SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" Symbolics = "0c5d862f-8b57-4792-8d23-62f2024744c7" TetGen = "c5d3f3f7-f850-59f6-8a2e-ffc6dc1317ea" Triangulate = "f7e6ffb2-c36d-4f8f-a77e-16e897189344" +UnicodePlots = "b8865327-cd53-5732-bb35-84acbb429228" [compat] Literate = ">=0.2.7" diff --git a/docs/make.jl b/docs/make.jl index 9e4f8c19..158a38c1 100644 --- a/docs/make.jl +++ b/docs/make.jl @@ -105,8 +105,7 @@ function make_all(; with_examples::Bool = true, modules = :all, run_examples::Bo end -#make_all(; with_examples = true, run_examples = true, run_notebooks = true) -make_all(; with_examples = false, run_examples = false, run_notebooks = false) +make_all(; with_examples = true, run_examples = true, run_notebooks = false) deploydocs( repo = "github.com/WIAS-PDELib/ExtendableFEM.jl", diff --git a/examples/Example103_BurgersEquation.jl b/examples/Example103_BurgersEquation.jl index 3b5a5c81..5763181b 100644 --- a/examples/Example103_BurgersEquation.jl +++ b/examples/Example103_BurgersEquation.jl @@ -79,7 +79,7 @@ function main(; prob = ExtendableFEM.generate_ODEProblem(PD, FES, (0.0, T); init = sol, mass_matrix = M) ## solve ODE problem - de_sol = DifferentialEquations.solve(prob, solver, abstol = 1.0e-6, reltol = 1.0e-3, dt = τ, dtmin = 1.0e-6, adaptive = true) + de_sol = solve(prob, solver, abstol = 1.0e-6, reltol = 1.0e-3, dt = τ, dtmin = 1.0e-6, adaptive = true) @info "#tsteps = $(length(de_sol))" ## extract final solution diff --git a/examples/Example106_NonlinearDiffusion.jl b/examples/Example106_NonlinearDiffusion.jl index 0ddefad5..9942e30d 100644 --- a/examples/Example106_NonlinearDiffusion.jl +++ b/examples/Example106_NonlinearDiffusion.jl @@ -95,7 +95,7 @@ function main(; prob = ExtendableFEM.generate_ODEProblem(PD, FES, (t0, T); init = sol, mass_matrix = M.entries.cscmatrix) ## solve ODE problem - de_sol = DifferentialEquations.solve(prob, solver, abstol = 1.0e-6, reltol = 1.0e-3, dt = τ, dtmin = 1.0e-8, adaptive = true) + de_sol = solve(prob, solver, abstol = 1.0e-6, reltol = 1.0e-3, dt = τ, dtmin = 1.0e-8, adaptive = true) @info "#tsteps = $(length(de_sol))" ## get final solution diff --git a/examples/Example205_HeatEquation.jl b/examples/Example205_HeatEquation.jl index 651ce732..03c240e5 100644 --- a/examples/Example205_HeatEquation.jl +++ b/examples/Example205_HeatEquation.jl @@ -60,7 +60,7 @@ function main(; prob = generate_ODEProblem(PD, FES, (0.0, T); init = sol, constant_matrix = true) ## solve ODE problem - de_sol = DifferentialEquations.solve(prob, solver, abstol = 1.0e-6, reltol = 1.0e-3, dt = τ, dtmin = 1.0e-6, adaptive = true) + de_sol = solve(prob, solver, abstol = 1.0e-6, reltol = 1.0e-3, dt = τ, dtmin = 1.0e-6, adaptive = true) @info "#tsteps = $(length(de_sol))" ## get final solution