diff --git a/scripts/exgdas_atmos_chgres_forenkf.sh b/scripts/exgdas_atmos_chgres_forenkf.sh index afc7cc9f5e..db628915df 100755 --- a/scripts/exgdas_atmos_chgres_forenkf.sh +++ b/scripts/exgdas_atmos_chgres_forenkf.sh @@ -21,7 +21,7 @@ source "$HOMEgfs/ush/preamble.sh" # Directories. pwd=$(pwd) -export FIXgsm=${FIXgsm:-$HOMEgfs/fix/fix_am} +export FIXgsm=${FIXgsm:-$HOMEgfs/fix/am} # Base variables CDATE=${CDATE:-"2001010100"} diff --git a/scripts/exgdas_enkf_ecen.sh b/scripts/exgdas_enkf_ecen.sh index 91e7483be9..c964e1dc7e 100755 --- a/scripts/exgdas_enkf_ecen.sh +++ b/scripts/exgdas_enkf_ecen.sh @@ -75,8 +75,8 @@ CYCLESH=${CYCLESH:-$HOMEgfs/ush/global_cycle.sh} export CYCLEXEC=${CYCLEXEC:-$HOMEgfs/exec/global_cycle} APRUN_CYCLE=${APRUN_CYCLE:-${APRUN:-""}} NTHREADS_CYCLE=${NTHREADS_CYCLE:-${NTHREADS:-1}} -export FIXfv3=${FIXfv3:-$HOMEgfs/fix/fix_fv3_gmted2010} -export FIXgsm=${FIXgsm:-$HOMEgfs/fix/fix_am} +export FIXfv3=${FIXfv3:-$HOMEgfs/fix/orog} +export FIXgsm=${FIXgsm:-$HOMEgfs/fix/am} export CYCLVARS=${CYCLVARS:-"FSNOL=-2.,FSNOS=99999.,"} export FHOUR=${FHOUR:-0} export DELTSFC=${DELTSFC:-6} diff --git a/scripts/exgdas_enkf_fcst.sh b/scripts/exgdas_enkf_fcst.sh index cd79681887..7fa9d3df4a 100755 --- a/scripts/exgdas_enkf_fcst.sh +++ b/scripts/exgdas_enkf_fcst.sh @@ -23,7 +23,7 @@ source "$HOMEgfs/ush/preamble.sh" # Directories. pwd=$(pwd) export FIX_DIR=${FIX_DIR:-$HOMEgfs/fix} -export FIX_AM=${FIX_AM:-$FIX_DIR/fix_am} +export FIX_AM=${FIX_AM:-$FIX_DIR/am} # Utilities export NCP=${NCP:-"/bin/cp -p"} diff --git a/scripts/exgdas_enkf_sfc.sh b/scripts/exgdas_enkf_sfc.sh index 4589a59356..044030c494 100755 --- a/scripts/exgdas_enkf_sfc.sh +++ b/scripts/exgdas_enkf_sfc.sh @@ -57,8 +57,8 @@ CYCLESH=${CYCLESH:-$HOMEgfs/ush/global_cycle.sh} export CYCLEXEC=${CYCLEXEC:-$HOMEgfs/exec/global_cycle} APRUN_CYCLE=${APRUN_CYCLE:-${APRUN:-""}} NTHREADS_CYCLE=${NTHREADS_CYCLE:-${NTHREADS:-1}} -export FIXfv3=${FIXfv3:-$HOMEgfs/fix/fix_fv3_gmted2010} -export FIXgsm=${FIXgsm:-$HOMEgfs/fix/fix_am} +export FIXfv3=${FIXfv3:-$HOMEgfs/fix/orog} +export FIXgsm=${FIXgsm:-$HOMEgfs/fix/am} export CYCLVARS=${CYCLVARS:-"FSNOL=-2.,FSNOS=99999.,"} export FHOUR=${FHOUR:-0} export DELTSFC=${DELTSFC:-6} diff --git a/scripts/exglobal_atmos_analysis_calc.sh b/scripts/exglobal_atmos_analysis_calc.sh index 2fa44c16b4..78ab3eb78f 100755 --- a/scripts/exglobal_atmos_analysis_calc.sh +++ b/scripts/exglobal_atmos_analysis_calc.sh @@ -23,7 +23,7 @@ source "$HOMEgfs/ush/preamble.sh" # Directories. pwd=$(pwd) -export FIXgsm=${FIXgsm:-$HOMEgfs/fix/fix_am} +export FIXgsm=${FIXgsm:-$HOMEgfs/fix/am} # Base variables CDATE=${CDATE:-"2001010100"} diff --git a/scripts/exglobal_atmos_sfcanl.sh b/scripts/exglobal_atmos_sfcanl.sh index 899e0ae84a..34eb863614 100755 --- a/scripts/exglobal_atmos_sfcanl.sh +++ b/scripts/exglobal_atmos_sfcanl.sh @@ -61,8 +61,8 @@ export SNOW_NUDGE_COEFF=${SNOW_NUDGE_COEFF:-'-2.'} export CYCLVARS=${CYCLVARS:-""} export FHOUR=${FHOUR:-0} export DELTSFC=${DELTSFC:-6} -export FIXgsm=${FIXgsm:-$HOMEgfs/fix/fix_am} -export FIXfv3=${FIXfv3:-$HOMEgfs/fix/fix_fv3_gmted2010} +export FIXgsm=${FIXgsm:-$HOMEgfs/fix/am} +export FIXfv3=${FIXfv3:-$HOMEgfs/fix/orog} # FV3 specific info (required for global_cycle) export CASE=${CASE:-"C384"} diff --git a/scripts/run_reg2grb2.sh b/scripts/run_reg2grb2.sh index bcdcb1d0be..668368056e 100755 --- a/scripts/run_reg2grb2.sh +++ b/scripts/run_reg2grb2.sh @@ -5,7 +5,7 @@ source "$HOMEgfs/ush/preamble.sh" #requires grib_util module MOM6REGRID=${MOM6REGRID:-$HOMEgfs} -export mask_file=$MOM6REGRID/fix/fix_reg2grb2/mask.0p25x0p25.grb2 +export mask_file=$MOM6REGRID/fix/reg2grb2/mask.0p25x0p25.grb2 # offline testing: #export DATA= diff --git a/ush/forecast_postdet.sh b/ush/forecast_postdet.sh index eeae89c11b..1e0e1631e7 100755 --- a/ush/forecast_postdet.sh +++ b/ush/forecast_postdet.sh @@ -179,7 +179,7 @@ EOF # Fractional grid related if [ $FRAC_GRID = ".true." ]; then - OROFIX=${OROFIX:-"${FIX_DIR}/fix_fv3_fracoro/${CASE}.mx${OCNRES}_frac"} + OROFIX=${OROFIX:-"${FIX_DIR}/orog/${CASE}.mx${OCNRES}_frac"} FIX_SFC=${FIX_SFC:-"${OROFIX}/fix_sfc"} for n in $(seq 1 $ntiles); do $NLN ${OROFIX}/oro_${CASE}.mx${OCNRES}.tile${n}.nc $DATA/INPUT/oro_data.tile${n}.nc @@ -240,7 +240,7 @@ EOF fi # Files for GWD - OROFIX_ugwd=${OROFIX_ugwd:-"${FIX_DIR}/fix_ugwd"} + OROFIX_ugwd=${OROFIX_ugwd:-"${FIX_DIR}/ugwd"} $NLN ${OROFIX_ugwd}/ugwp_limb_tau.nc $DATA/ugwp_limb_tau.nc for n in $(seq 1 $ntiles); do $NLN ${OROFIX_ugwd}/$CASE/${CASE}_oro_data_ls.tile${n}.nc $DATA/INPUT/oro_data_ls.tile${n}.nc @@ -278,12 +278,12 @@ EOF ## merra2 aerosol climo if [ $IAER -eq "1011" ]; then - FIX_AER="${FIX_DIR}/fix_aer" + FIX_AER="${FIX_DIR}/aer" for month in $(seq 1 12); do MM=$(printf %02d $month) $NLN "${FIX_AER}/merra2.aerclim.2003-2014.m${MM}.nc" "aeroclim.m${MM}.nc" done - FIX_LUT="${FIX_DIR}/fix_lut" + FIX_LUT="${FIX_DIR}/lut" $NLN $FIX_LUT/optics_BC.v1_3.dat $DATA/optics_BC.dat $NLN $FIX_LUT/optics_OC.v1_3.dat $DATA/optics_OC.dat $NLN $FIX_LUT/optics_DU.v15_3.dat $DATA/optics_DU.dat @@ -784,7 +784,7 @@ MOM6_postdet() { $NCP -pf $FIXmom/$OCNRES/* $DATA/INPUT/ # Copy coupled grid_spec - spec_file="$FIX_DIR/fix_cpl/a${CASE}o${OCNRES}/grid_spec.nc" + spec_file="$FIX_DIR/cpl/a${CASE}o${OCNRES}/grid_spec.nc" if [ -s $spec_file ]; then $NCP -pf $spec_file $DATA/INPUT/ else diff --git a/ush/forecast_predet.sh b/ush/forecast_predet.sh index 4af2df8b82..28e612e9e9 100755 --- a/ush/forecast_predet.sh +++ b/ush/forecast_predet.sh @@ -73,10 +73,10 @@ FV3_GFS_predet(){ pwd=$(pwd) HOMEgfs=${HOMEgfs:-${PACKAGEROOT:-$pwd}} FIX_DIR=${FIX_DIR:-$HOMEgfs/fix} - FIX_AM=${FIX_AM:-$FIX_DIR/fix_am} - FIX_AER=${FIX_AER:-$FIX_DIR/fix_aer} - FIX_LUT=${FIX_LUT:-$FIX_DIR/fix_lut} - FIXfv3=${FIXfv3:-$FIX_DIR/fix_fv3_gmted2010} + FIX_AM=${FIX_AM:-$FIX_DIR/am} + FIX_AER=${FIX_AER:-$FIX_DIR/aer} + FIX_LUT=${FIX_LUT:-$FIX_DIR/lut} + FIXfv3=${FIXfv3:-$FIX_DIR/orog} DATA=${DATA:-$pwd/fv3tmp$$} # temporary running directory ROTDIR=${ROTDIR:-$pwd} # rotating archive directory ICSDIR=${ICSDIR:-$pwd} # cold start initial conditions diff --git a/ush/fv3gfs_regrid_nemsio.sh b/ush/fv3gfs_regrid_nemsio.sh index 6a98112578..84b2efa16b 100755 --- a/ush/fv3gfs_regrid_nemsio.sh +++ b/ush/fv3gfs_regrid_nemsio.sh @@ -27,8 +27,8 @@ pwd=$(pwd) DATA=${DATA:-$pwd} HOMEgfs=${HOMEgfs:-$PACKAGEROOT} FIX_DIR=${FIX_DIR:-$HOMEgfs/fix} -FIX_AM=${FIX_AM:-$FIX_DIR/fix_am} -FIXfv3=${FIXfv3:-$FIX_DIR/fix_fv3_gmted2010} +FIX_AM=${FIX_AM:-$FIX_DIR/am} +FIXfv3=${FIXfv3:-$FIX_DIR/orog} REGRID_NEMSIO_EXEC=${REGRID_NEMSIO_EXEC:-$HOMEgfs/exec/regrid_nemsio} REGRID_NEMSIO_TBL=${REGRID_NEMSIO_TBL:-$HOMEgfs/parm/parm_fv3diag/variable_table.txt} diff --git a/ush/fv3gfs_remap.sh b/ush/fv3gfs_remap.sh index 619858ea5d..430e96c868 100755 --- a/ush/fv3gfs_remap.sh +++ b/ush/fv3gfs_remap.sh @@ -15,7 +15,7 @@ pwd=$(pwd) export DATA=${DATA:-$pwd} export HOMEgfs=${HOMEgfs:-$PACKAGEROOT} export FIX_DIR=${FIX_DIR:-$HOMEgfs/fix} -export FIXfv3=${FIXfv3:-$FIX_DIR/fix_fv3_gmted2010} +export FIXfv3=${FIXfv3:-$FIX_DIR/orog} export REMAPEXE=${REMAPEXE:-$HOMEgfs/exec/fregrid_parallel} export IPD4=${IPD4:-"YES"} diff --git a/ush/gaussian_sfcanl.sh b/ush/gaussian_sfcanl.sh index 68c91b44a1..69d2db4e5e 100755 --- a/ush/gaussian_sfcanl.sh +++ b/ush/gaussian_sfcanl.sh @@ -28,9 +28,9 @@ # HOMEgfs Directory for gfs version. Default is # $BASEDIR/gfs_ver.v15.0.0} # FIXam Directory for the global fixed climatology files. -# Defaults to $HOMEgfs/fix/fix_am +# Defaults to $HOMEgfs/fix/am # FIXfv3 Directory for the model grid and orography netcdf -# files. Defaults to $HOMEgfs/fix/fix_fv3_gmted2010 +# files. Defaults to $HOMEgfs/fix/orog # FIXWGTS Weight file to use for interpolation # EXECgfs Directory of the program executable. Defaults to # $HOMEgfs/exec @@ -133,8 +133,8 @@ gfs_ver=${gfs_ver:-v16.3.0} BASEDIR=${BASEDIR:-${PACKAGEROOT:-/lfs/h1/ops/prod/packages}} HOMEgfs=${HOMEgfs:-$BASEDIR/gfs.${gfs_ver}} EXECgfs=${EXECgfs:-$HOMEgfs/exec} -FIXfv3=${FIXfv3:-$HOMEgfs/fix/fix_fv3_gmted2010} -FIXam=${FIXam:-$HOMEgfs/fix/fix_am} +FIXfv3=${FIXfv3:-$HOMEgfs/fix/orog} +FIXam=${FIXam:-$HOMEgfs/fix/am} FIXWGTS=${FIXWGTS:-$FIXfv3/$CASE/fv3_SCRIP_${CASE}_GRIDSPEC_lon${LONB_SFC}_lat${LATB_SFC}.gaussian.neareststod.nc} DATA=${DATA:-$(pwd)} COMOUT=${COMOUT:-$(pwd)} diff --git a/ush/gfs_truncate_enkf.sh b/ush/gfs_truncate_enkf.sh index c7bdfad0c4..0a7d6fc0dd 100755 --- a/ush/gfs_truncate_enkf.sh +++ b/ush/gfs_truncate_enkf.sh @@ -14,7 +14,7 @@ mkdir -p $DATATMP cd $DATATMP export LEVS=${LEVS_LORES:-64} -export FIXam=${FIXam:-$HOMEgfs/fix/fix_am} +export FIXam=${FIXam:-$HOMEgfs/fix/am} export CHGRESSH=${CHGRESSH:-${USHgfs}/global_chgres.sh} export CHGRESEXEC=${CHGRESEXEC-${EXECgfs}/global_chgres} diff --git a/ush/global_nceppost.sh b/ush/global_nceppost.sh index 2c0711c57f..89b5ac596f 100755 --- a/ush/global_nceppost.sh +++ b/ush/global_nceppost.sh @@ -294,8 +294,8 @@ elif [ ${OUTTYP} -eq 4 ] ; then export MODEL_OUT_FORM=${MODEL_OUT_FORM:-binarynemsiompiio} export GFSOUT=${NEMSINP} - ln -sf $FIXglobal/fix_am/global_lonsperlat.t${JCAP}.${LONB}.${LATB}.txt ./lonsperlat.dat - ln -sf $FIXglobal/fix_am/global_hyblev.l${LEVS}.txt ./global_hyblev.txt + ln -sf $FIXglobal/am/global_lonsperlat.t${JCAP}.${LONB}.${LATB}.txt ./lonsperlat.dat + ln -sf $FIXglobal/am/global_hyblev.l${LEVS}.txt ./global_hyblev.txt fi # allow threads to use threading in Jim's sp lib diff --git a/ush/syndat_qctropcy.sh b/ush/syndat_qctropcy.sh index 402db48cd1..26d31573d1 100755 --- a/ush/syndat_qctropcy.sh +++ b/ush/syndat_qctropcy.sh @@ -76,7 +76,7 @@ HOMENHCp1=${HOMENHCp1:-/gpfs/?p1/nhc/save/guidance/storm-data/ncep} HOMENHC=${HOMENHC:-/gpfs/dell2/nhc/save/guidance/storm-data/ncep} TANK_TROPCY=${TANK_TROPCY:-${DCOMROOT}/us007003} -FIXSYND=${FIXSYND:-$HOMEgfs/fix/fix_am} +FIXSYND=${FIXSYND:-$HOMEgfs/fix/am} USHSYND=${USHSYND:-$HOMEgfs/ush} EXECSYND=${EXECSYND:-$HOMEgfs/exec} PARMSYND=${PARMSYND:-$HOMEgfs/parm/relo}