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solo updates #933

Merged
merged 10 commits into from Feb 23, 2021
Merged

solo updates #933

merged 10 commits into from Feb 23, 2021

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njbernstein
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@njbernstein njbernstein commented Feb 18, 2021

Adds early stopping by default to solo train

Adds min_lr option SCVI training

Closes #932

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codecov bot commented Feb 18, 2021

Codecov Report

Merging #933 (f01d71c) into master (f2c42c6) will increase coverage by 0.03%.
The diff coverage is 87.50%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master     #933      +/-   ##
==========================================
+ Coverage   89.44%   89.47%   +0.03%     
==========================================
  Files          77       79       +2     
  Lines        5863     5891      +28     
==========================================
+ Hits         5244     5271      +27     
- Misses        619      620       +1     
Impacted Files Coverage Δ
scvi/external/solo/_model.py 95.87% <85.71%> (-0.80%) ⬇️
scvi/lightning/_trainingplans.py 94.60% <100.00%> (+0.02%) ⬆️
scvi/__init__.py 100.00% <0.00%> (ø)
scvi/_utils.py 100.00% <0.00%> (ø)

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@adamgayoso adamgayoso merged commit 5ed3173 into scverse:master Feb 23, 2021
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Additional features to enable solo CLI
2 participants