DecoMetDIA was developed to process SWATH-MS based data for metabolomics. For detail, please read our recent publication on Analytical Chemistry (dio:doi.org/10.1021/acs.analchem.9b02655)
DecoMetDIA was developed as an R package with Rcpp code. Compiling is needed when installing. On Windows OS, RTools should be installed first. Please follow the introduction on CRAN.
The install can be done with
install_github() method in devtools as following:
Yin, Y., Wang, R., Cai, Y., Wang, Z. & Zhu, Z.-J. DecoMetDIA: Deconvolution of Multiplexed MS/MS Spectra for Metabolite Identification in SWATH-MS-Based Untargeted Metabolomics. Anal. Chem. 91, 11897–11904 (2019).