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mimager: The microarray imager
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README.md

mimager: The Microarray Imager

Travis-CI Build Status codecov Bioc

mimager simplifies the process of imaging microarrays and inspecting them for spatial artifacts by providing a consistent visualization interface that supports many of Bioconductor's microarray object classes.

Installation

You can install the latest release from Bioconductor:

if (!requireNamespace("BiocManager", quietly=TRUE))
    install.packages("BiocManager")
BiocManager::install("mimager")

or the current development version using devtools:

# library(devtools)
install_github("aaronwolen/mimager", build_vignettes = TRUE)

Example

library(mimager)
library(affydata)
data("Dilution")

mimage(Dilution, transform = arle, nrows = 1, legend.label = "RLE")

mimager example

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