diff --git a/veritymap/src/projects/veritymap/config/config.cpp b/veritymap/src/projects/veritymap/config/config.cpp index 8cf8285..bd4ee06 100644 --- a/veritymap/src/projects/veritymap/config/config.cpp +++ b/veritymap/src/projects/veritymap/config/config.cpp @@ -42,7 +42,7 @@ Config Config::load_config_file(const std::filesystem::path& config_fn) { stod(m.at("min_score")), stod(m.at("max_top_score_prop")), stoll(m.at("max_jump")), - stod(m.at("misassembly_penalty_base")) / stod(m.at("k")), + stod(m.at("misassembly_penalty_base")), stod(m.at("diff_penalty_mult")), stoull(m.at("min_chain_range")), stoull(m.at("max_supp_dist_diff")), @@ -52,4 +52,4 @@ Config Config::load_config_file(const std::filesystem::path& config_fn) { Config::Chain2SAMParams chain_2_sam_params{stod(m.at("min_end_ident")), ksw_2_params}; return Config{common_params, hash_params, kmer_indexer_params, chaining_params, chain_2_sam_params}; -} \ No newline at end of file +}