From 0bb1dd1bff34a2cdbd3b4cf3fe5bc0b6f91be61a Mon Sep 17 00:00:00 2001 From: Alexey Gurevich Date: Thu, 22 Nov 2018 10:47:33 +0300 Subject: [PATCH] Docs: changes and final (hopefully) date for 5.0.2 release --- CHANGES.txt | 2 ++ manual.html | 4 ++-- 2 files changed, 4 insertions(+), 2 deletions(-) diff --git a/CHANGES.txt b/CHANGES.txt index 37bc8cd8d6..dcc4a695b1 100644 --- a/CHANGES.txt +++ b/CHANGES.txt @@ -7,6 +7,8 @@ 3. Fixed bug with some rare crashes of reads_analyzer module. + 4. Tiny fixes in error and warning messages. + 5.0.1 1. Using 'asm20' minimap2 preset for references with high divergence from the diff --git a/manual.html b/manual.html index ace4685e50..5de2a0ef2d 100644 --- a/manual.html +++ b/manual.html @@ -102,7 +102,7 @@

QUAST 5.0.2 manual

for guidelines on how to complete the licensing process.

- Version 5.0.2 of QUAST was released under GPL v2 on November 21, 2018. Note that some of build-in third-party tools are not under GPL v2. See LICENSE for details. + Version 5.0.2 of QUAST was released under GPL v2 on November 22, 2018. Note that some of build-in third-party tools are not under GPL v2. See LICENSE for details.

Contents

@@ -439,7 +439,7 @@

2.3 Command line options

--conserved-genes-finding (or -b)
-Enables search for Universal Single-Copy Orthologs using BUSCO (only on Linux). Disabled by default.
+Enables search for Universal Single-Copy Orthologs using BUSCO (only on Linux, only with Python 2.7 or Python 3). Disabled by default.
 
By default, we assume that the genome is prokaryotic, and BUSCO uses the bacterial database of orthologs. If the genome is eukaryotic (fungal), use --eukaryote (--fungus)