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One of my metapades runs is currently failing with the error -11. I have tried different versions of spades (3.12 binary, 3.12 from conda and 3.13. binary) but it always fails at the exact same spot:
35:57:01.233 230G / 654G INFO General (sequence_mapper_notifier.h: 80) Processed 4200000 reads
== Error == system call for: "['SPAdes-3.13.0-Linux/bin/spades-core', 'spades/K55/configs/config.info', 'spades/K55/configs/mda_mode.info', 'spades/K55/configs/meta_mode.info']" finished abnormally, err code: -11
Have you seen the problem before? All my other assemblies (>100) finish without an error with the 3.12. version I have installed.
Hi!
One of my metapades runs is currently failing with the error -11. I have tried different versions of spades (3.12 binary, 3.12 from conda and 3.13. binary) but it always fails at the exact same spot:
Have you seen the problem before? All my other assemblies (>100) finish without an error with the 3.12. version I have installed.
Thanks a lot,
Hans
params.txt
spades.log
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