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autopad-samples Fix header approach Aug 18, 2019
bioc-version
copy-bam-files
delete-file-system-cruft
delete-named-subdirs
docker-run-image Fix header approach Aug 18, 2019
dotfile Improve config dotfile link handling Aug 26, 2019
ensembl-fasta
ensembl-gtf
extract-fastq Fix header approach Aug 18, 2019
fastq-dump-from-sra-list
fastq-lanepool
fastq-reads-per-file
fastq-to-fasta
ffmpeg-alac-to-flac
ffmpeg-flac-to-alac Fix header approach Aug 18, 2019
find-and-replace
find-broken-links
find-build-cellar-symlinks
flybase-fasta Make variable usage more consistent Aug 18, 2019
flybase-gtf
ftp-mirror
gencode-fasta
gencode-gtf
git-pull-recursive
git-push-recursive
git-push-submodules
git-reset-fork-to-upstream Fix header approach Aug 18, 2019
git-status-recursive
gzip-dir
indrops-bcl2fastq Fix header approach Aug 18, 2019
indrops-i5-sample-index-counts Fix header approach Aug 18, 2019
install-anaconda3 Ensure prefix permissions are correct Sep 10, 2019
install-autojump
install-chromhmm Update install-chromhmm Sep 10, 2019
install-conda-env-pandoc Fix header approach Aug 18, 2019
install-conda-env-texlive-core Fix header approach Aug 18, 2019
install-doom-emacs Fix header approach Aug 18, 2019
install-dotfiles Improve dotfiles installation Aug 26, 2019
install-ensembl-api
install-miniconda3 Fix header approach Aug 18, 2019
install-perlbrew
install-perlbrew-perl Fix header approach Aug 18, 2019
install-perlbrew-system Fix header approach Aug 18, 2019
install-python-virtualenv
install-python-virtualenv-reticulate Fix header approach Aug 18, 2019
install-rbenv Fix header approach Aug 18, 2019
install-rbenv-ruby
install-rcheck
install-spacemacs Switch to https Aug 26, 2019
ip-address
koopa
list-dotfiles
list-path-priority
md5sum-check-to-new-md5-file
move-files-up-1-level Fix header approach Aug 18, 2019
move-into-dated-dirs-by-filename Fix header approach Aug 18, 2019
move-into-dated-dirs-by-timestamp Fix header approach Aug 18, 2019
nfiletypes Fix header approach Aug 18, 2019
r-javareconf Fix header approach Aug 18, 2019
rename-fq-to-fastq
rename-from-csv
reset-permissions Fix header approach Aug 18, 2019
run-kallisto Improve kallisto and salmon scripts Sep 12, 2019
run-salmon
sort-lines
sox-downsample Fix header approach Aug 18, 2019
strict-mode
trash Fix header approach Aug 18, 2019
update-conda
update-tex
wget-recursive
youtube-mp3
youtube-thumbnail Fix header approach Aug 18, 2019
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