You can clone with
HTTPS or Subversion.
I am logged into my Pi, WebIDE seems to be working, files are writing to Bitbucket.
however nothing is getting written to the Pi? terminal always pointing to
pi@raspberrypi /usr/share/adafruit/webide/repositories/my-pi-projects $
when you look on the pi, the scripts are not there?
Try closing the terminal, and opening it again once you've viewed the file. Can you manually type in the terminal?