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  1. brainglobe/cellfinder brainglobe/cellfinder Public

    Automated 3D cell detection in very large images

    Python 172 39

  2. brainglobe/brainreg brainglobe/brainreg Public

    Automated 3D brain registration with support for multiple species and atlases.

    Python 112 26

  3. brainglobe/brainglobe-atlasapi brainglobe/brainglobe-atlasapi Public

    A lightweight python module to interact with atlases for systems neuroscience

    Python 116 24

  4. brainglobe/brainglobe-segmentation brainglobe/brainglobe-segmentation Public

    Segmentation of anatomical structures in a common coordinate space

    Python 28 9

  5. brainglobe/brainrender brainglobe/brainrender Public

    a python based software for visualization of neuroanatomical and morphological data.

    Python 521 75

  6. neuroinformatics-unit/python-cookiecutter neuroinformatics-unit/python-cookiecutter Public

    Utility to create a basic Python project structure with tests, CI etc.

    Python 20 3