Segfault on building MacOS

[tallakt]

Building on MacOS with Julia 1.7.2 gives me

bin  % ./create_sys_image
Updating packages...
[ Info: Loading packages ...
[ Info: Creating sysimage ...
[ Info: PackageCompiler: Executing /Users/tallakt/kitesims/test/test_for_precompile.jl => /var/folders/0g/0zjw8w1n76b0sqzn5vd8tb3r0000gn/T/jl_packagecompiler_mSRrHy/jl_WO0WIa
[ Info: Makie/Makie is caching fonts, this may take a while. Needed only on first run!

signal (11): Segmentation fault: 11
in expression starting at /Users/tallakt/kitesims/test/test_for_precompile.jl:1
calc_wind_factor at /Users/tallakt/.julia/packages/AtmosphericModels/JaPSH/src/AtmosphericModels.jl:0 [inlined]
calc_wind_factor at /Users/tallakt/.julia/packages/AtmosphericModels/JaPSH/src/AtmosphericModels.jl:102 [inlined]
inner_loop! at /Users/tallakt/.julia/packages/KiteModels/fAylU/src/KPS4.jl:328 [inlined]
loop! at /Users/tallakt/.julia/packages/KiteModels/fAylU/src/KPS4.jl:364
residual! at /Users/tallakt/.julia/packages/KiteModels/fAylU/src/KPS4.jl:415
unknown function (ip: 0x10509c3fb)
jl_apply_generic at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
test_initial_condition! at /Users/tallakt/.julia/packages/KiteModels/fAylU/src/KPS4.jl:525
fj_finitediff! at /Users/tallakt/.julia/packages/NLSolversBase/cfJrN/src/objective_types/oncedifferentiable.jl:138
unknown function (ip: 0x10508e22b)
jl_apply_generic at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
value_jacobian!! at /Users/tallakt/.julia/packages/NLSolversBase/cfJrN/src/interface.jl:124
value_jacobian!! at /Users/tallakt/.julia/packages/NLSolversBase/cfJrN/src/interface.jl:122 [inlined]
trust_region_ at /Users/tallakt/.julia/packages/NLsolve/gJL1I/src/solvers/trust_region.jl:119
trust_region at /Users/tallakt/.julia/packages/NLsolve/gJL1I/src/solvers/trust_region.jl:235 [inlined]
trust_region at /Users/tallakt/.julia/packages/NLsolve/gJL1I/src/solvers/trust_region.jl:235 [inlined]
#nlsolve#25 at /Users/tallakt/.julia/packages/NLsolve/gJL1I/src/nlsolve/nlsolve.jl:26
nlsolve##kw at /Users/tallakt/.julia/packages/NLsolve/gJL1I/src/nlsolve/nlsolve.jl:18 [inlined]
#nlsolve#30 at /Users/tallakt/.julia/packages/NLsolve/gJL1I/src/nlsolve/nlsolve.jl:52
nlsolve##kw at /Users/tallakt/.julia/packages/NLsolve/gJL1I/src/nlsolve/nlsolve.jl:46
unknown function (ip: 0x105089b83)
#find_steady_state!#17 at /Users/tallakt/.julia/packages/KiteModels/fAylU/src/KPS4.jl:548
find_steady_state!##kw at /Users/tallakt/.julia/packages/KiteModels/fAylU/src/KPS4.jl:517 [inlined]
#init_sim!#39 at /Users/tallakt/.julia/packages/KiteModels/fAylU/src/KiteModels.jl:368
init_sim!##kw at /Users/tallakt/.julia/packages/KiteModels/fAylU/src/KiteModels.jl:366
unknown function (ip: 0x10506308b)
jl_apply_generic at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
do_call at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
eval_body at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
jl_interpret_toplevel_thunk at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
jl_toplevel_eval_flex at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
jl_toplevel_eval_flex at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
jl_toplevel_eval_in at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
eval at ./boot.jl:373 [inlined]
include_string at ./loading.jl:1196
jl_apply_generic at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
_include at ./loading.jl:1253
include at ./Base.jl:418
jl_apply_generic at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
exec_options at ./client.jl:292
_start at ./client.jl:495
jfptr__start_41470 at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/sys.dylib (unknown line)
jl_apply_generic at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
true_main at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
jl_repl_entrypoint at /Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.7.dylib (unknown line)
Allocations: 282549928 (Pool: 282497173; Big: 52755); GC: 211
ERROR: LoadError: failed process: Process(setenv(`/Applications/Julia-1.7.app/Contents/Resources/julia/bin/julia --color=yes --startup-file=no --sysimage=/Applications/Julia-1.7.app/Contents/Resources/julia/lib/julia/sys.dylib --compile=all --trace-compile=/var/folders/0g/0zjw8w1n76b0sqzn5vd8tb3r0000gn/T/jl_packagecompiler_mSRrHy/jl_WO0WIa test/test_for_precompile.jl`,["XPC_FLAGS=0x0", "COMMAND_MODE=unix2003", "PATH=/opt/homebrew/bin:/opt/homebrew/sbin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/Applications/kitty.app/Contents/MacOS:/Users/tallakt/.mix/escripts", "PWD=/Users/tallakt/kitesims", "XPC_SERVICE_NAME=0", "HOMEBREW_PREFIX=/opt/homebrew", "SHELL=/bin/zsh", "KITTY_PID=584", "__CF_USER_TEXT_ENCODING=0x1F5:0x0:0xC", "ERL_AFLAGS=-kernel shell_history enabled"  …  "HOMEBREW_REPOSITORY=/opt/homebrew", "USER=tallakt", "KITTY_WINDOW_ID=3", "SECURITYSESSIONID=186b1", "INFLUX_PASSWORD=CWH80MpG5SiX", "TERM=xterm-kitty", "INFLUX_GENERATOR_API_KEY=P7oDE84YZdf6egHWZF-HIJr0XVNCR-bXI_ArCxYJ6SOKByIEr3sFfsFXriKihHNdFfR_FGwiALggHGY44Kl6Lw==", "HOME=/Users/tallakt", "OPENBLAS_MAIN_FREE=1", "COLORTERM=truecolor"]), ProcessExited(139)) [139]

Stacktrace:
 [1] pipeline_error
   @ ./process.jl:531 [inlined]
 [2] run(::Cmd; wait::Bool)
   @ Base ./process.jl:446
 [3] run
   @ ./process.jl:444 [inlined]
 [4] run_precompilation_script(project::String, sysimg::String, precompile_file::String, precompile_dir::String)
   @ PackageCompiler ~/.julia/packages/PackageCompiler/YNnEB/src/PackageCompiler.jl:239
 [5] create_sysimg_object_file(object_file::String, packages::Vector{String}, packages_sysimg::Set{Base.PkgId}; project::String, base_sysimage::String, precompile_execution_file::Vector{String}, precompile_statements_file::Vector{String}, cpu_target::String, script::Nothing, sysimage_build_args::Cmd, extra_precompiles::String, incremental::Bool)
   @ PackageCompiler ~/.julia/packages/PackageCompiler/YNnEB/src/PackageCompiler.jl:261
 [6] create_sysimage(packages::Vector{Symbol}; sysimage_path::String, project::String, precompile_execution_file::String, precompile_statements_file::Vector{String}, incremental::Bool, filter_stdlibs::Bool, cpu_target::String, script::Nothing, sysimage_build_args::Cmd, include_transitive_dependencies::Bool, base_sysimage::Nothing, julia_init_c_file::Nothing, version::Nothing, soname::Nothing, compat_level::String, extra_precompiles::String)
   @ PackageCompiler ~/.julia/packages/PackageCompiler/YNnEB/src/PackageCompiler.jl:510
 [7] top-level scope
   @ ~/kitesims/test/create_sys_image.jl:10
 [8] include(fname::String)
   @ Base.MainInclude ./client.jl:451
 [9] top-level scope
   @ none:1
in expression starting at /Users/tallakt/kitesims/test/create_sys_image.jl:10

[ufechner7]

Are you using an ARM CPU? If yes, are you using Rosetta?
I got feedback from a researcher in Belgium that it works for him on Mac...

[tallakt]

Yes and ? Tallak

On August 22, 2022, GitHub ***@***.***> wrote: Are you using an ARM CPU? If yes, are you using Rosetta?

— Reply to this email directly, view it on GitHub <#9 (comment)- 1221926398>, or unsubscribe <https://github.com/notifications/unsubscribe- auth/AAAMGLV37B7BLVFKQQRD53LV2MPUBANCNFSM57GLRQQA>. You are receiving this because you authored the thread.Message ID: ***@***.***>

[ufechner7]

Just gathering information. So the error happens on a Mac with ARM CPU using Rosetta...

I will try to reproduce it with Julia 1.7.2 on Linux...

[tallakt]

I am using the ARM compiled version of Julia, no Rosetta

[tallakt]

So I made a bit more progress on this. Actually I use Julia 1.8.0-beta3, started with the command julia1.8

The scripts generated do not work with a different executable than julia

I was able to get around this by editing the generated scripts.

Still my progress stopped because I did not have a generated examples folder... thus I was missing joystick.jl

[tallakt]

Other than tah, it is working well except I have no joystick on my machine

[ufechner7]

Great, good progress! Native Julia for ARM on MacOS is know not to work with Julia versions before 1.8 ...

Did you execute:

using KiteSimulators
cp_examples()

as explained in the README.md ?

[tallakt]

That was the missing part it seems. I guess we can close this issue then

[ufechner7]

Solved...
Without modification of the scripts in the bin folder it is required that the Julia executable is named julia and not julia-1.8 or whatever...
Thanks for testing on Mac! 👍

[ufechner7]

Installation of Julia is explained on https://ufechner7.github.io/2022/08/18/installing-julia.html

You can also use jill.py if you want to easily switch between Julia versions...