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changes for issue #163

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schristley committed Mar 28, 2019
1 parent 1d46e25 commit 8978d72b4e468ac16ae964fe4163034a1a833459
Showing with 6 additions and 3 deletions.
  1. +1 −1 AIRR_Minimal_Standard_Data_Elements.tsv
  2. +5 −2 specs/airr-schema.yaml
@@ -1,7 +1,7 @@
MiAIRR data set / subset MiAIRR field designation Data type Content format MiAIRR content definition Field value example AIRR Formats WG field name
1 / study Study string Free text Unique ID assigned by study registry PRJNA001 study_id
1 / study Study title string Free text Descriptive study title Effects of sun light exposure of the Treg repertoire study_title
1 / study Study type string {"ontology": "NCIT", "top_node": "Study Design", "draft": true} Generic study design Case-Control Study study_description
1 / study Study type string {"ontology": "NCIT", "top_node": "Study Design", "draft": true} Generic study design Case-Control Study study_type
1 / study Study inclusion/exclusion criteria string Free text List of criteria for inclusion/exclusion for the study Include: Clinical P. falciparum infection; Exclude: Seropositive for HIV inclusion_exclusion_criteria
1 / study Grant funding agency string Free text Funding agencies and grant numbers NIH, award number R01GM987654 grants
1 / study Contact information (data collection) string Free text Full contact information of the data collector, i.e. the person who is legally responsible for data collection and release. This should include an e-mail address. Dr. P. Stibbons, p.stibbons@unseenu.edu collected_by
@@ -110,9 +110,9 @@ Study:
x-miairr-name: Study title
x-miairr-format: free text
x-miairr-example: Effects of sun light exposure of the Treg repertoire
study_description:
study_type:
$ref: '#/Ontology'
description: Generic study design
description: Type of study design
x-miairr:
required: true
nullable: true
@@ -127,6 +127,9 @@ Study:
top_node:
id: C15320
value: Study Design
study_description:
type: string
description: Generic study description
inclusion_exclusion_criteria:
type: string
description: List of criteria for inclusion/exclusion for the study

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