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README.md
SACT Example 2.ipynb
SACT Example 3.ipynb
SACT Example.ipynb
example_runme.py

README.md

SACT Example

Example scripts for running SACT. example_runme.py provides an example usage of the tool and can be run with the following line:

python example_runme.py

Prior to running these files, follow the install instructions listed here: https://aksimhal.github.io/SynapseAnalysis/. In this script, there are two clones of the PSD-95 antibody, called PSD95m_1st.tif and PSD95r_2nd.tif and both are tested against the same reference antibody, synapsin_1st.tif. The file contains a function, psd_pairwise_comparison(). This function collates the queries and data location before running the script.