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1. wilkelab/Opfi wilkelab/Opfi Public

   A Python package for discovery, annotation, and analysis of gene clusters in genomics or metagenomics data sets.

   Python 21 4

2. pinetree pinetree Public

   Forked from clauswilke/pinetree

   🌲 a flexible gene expression simulator with codon-specific translation rates

   C++ 1

3. phiX174-simulation phiX174-simulation Public

   Bacteriophage phiX174 gene expression simulations using Pinetree.

   Python 1 1

4. tRNA_dynamics tRNA_dynamics Public

   Modeling codon usage and tRNA dynamics

   Jupyter Notebook