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LICENSE
PatternFinder.java
README
output.format.txt
pattern_finder.jar
sequences1L=10.txt
sequences2L=18.txt
sequencesL=10.txt

README

Alex Ksikes, ak107@cs.cornell.edu

To run:

java -jar pattern_finder.zip [datefile] [L] [search_mode] [refine_mode]

type with no option for help...

To compile:

Code is already compiled in jar file pattern_finder.zip

extract zip archive pattern_finder.zip and run 
javac ../gibbs/PatternFinder.java