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open-body-fit

Software for estimating biomechanics from poses extracted from video. This repository contains C++ code for visualizing and generating estimates of velocities, accelerations, forces, etc from points extracted from a video. We additionally include our R scripts for visualizing and analyzing this data.

Click here for documentation on our R scripts

Please send feedback and questions to anormoyle @ brynmawr.edu

ubuntu

Peek 2022-09-26 16-09

Demo

We demonstrate the software using a video of Nicaraguan sign language. The software takes the following input files (located in the demo directory).

Input Files:

  • demo/images - frames of input video for checking the fit (30 fps)
  • demo/036CR1-3d.csv - extracted poses from video (csv file)

Keyboard controls:

  • Press '3' to switch from 3D and 2D views
  • Press SPACE to play/pause the animation
  • When paused, press Up to go forward one frame
  • When paused, press Down to go backward one frame
  • Press 'M' to toggle the physics visualization (yellow cubes)
  • Press 'S' to toggle the skeleton (blue)
  • Press 'P' to toggle the points (black spheres)
  • Press 'H' to center the view on the head
  • Press 'W' to center the view on the wrist

Camera controls (3D view):

  • Left mouse button rotates the camera
  • Middle mouse button zooms in and out
  • Right mouse button pans the camera

Build from source

You will need cmake and C++ development tools installed to build from source.

The repository includes the source for the following dependencies

Ubuntu

Install dependencies

sudo apt-get update
sudo apt-get dist-upgrade
sudo apt-get install libglfw3-dev mesa-utils libglew-dev
sudo apt-get install f2c libblas-dev liblapack-dev
sudo apt-get install libtinyxml-dev libeigen3-dev 
sudo apt-get install libassimp-dev libccd-dev libfcl-dev libboost-regex-dev libboost-system-dev

NOTE: If you receive an error involving boost_filesystem, also do sudo apt-get install libboost-all-dev.

Build source

From the root directory (e.g. open-body-fit), build dart, other dependencies, and our code.

cmake -S ./src/external/dart -B ./src/external/dart/build -DCMAKE_BUILD_TYPE=Debug
cmake --build ./src/external/dart/build  --config Debug
cmake -B ./build -DCMAKE_BUILD_TYPE=Debug
cmake --build ./build  --config Debug

Run

The executable should be run from the /bin directory

cd open-body-fit/bin
./open-body-fit

Cite

Normoyle A., Artacho B., Savakis A., Senghas A., Badler N. I., Occhino C., Rothstein S. J., and Dye M. W. G., 2022, Open-Source Pipeline for Skeletal Modeling of Sign Language Utterances from 2D Video Sources [Talk], Theoretical Issues in Sign Language Research (TISLR)

You can see the talk here.

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Software for estimating biomechanics from poses extracted from video

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