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import json
import logging
from typing import Union, List, Dict, Any
import warnings
import torch
from torch.nn.modules import Dropout
import numpy
with warnings.catch_warnings():
warnings.filterwarnings("ignore", category=FutureWarning)
import h5py
from overrides import overrides
from allennlp.common.file_utils import cached_path
from allennlp.common.checks import ConfigurationError
from allennlp.common import Params
from allennlp.common.util import lazy_groups_of
from allennlp.modules.elmo_lstm import ElmoLstm
from allennlp.modules.highway import Highway
from allennlp.modules.scalar_mix import ScalarMix
from allennlp.nn.util import remove_sentence_boundaries, add_sentence_boundary_token_ids, get_device_of
from import ELMoCharacterMapper, ELMoTokenCharactersIndexer
from import Batch
from import Token, Vocabulary, Instance
from import TextField
logger = logging.getLogger(__name__) # pylint: disable=invalid-name
# pylint: disable=attribute-defined-outside-init
class Elmo(torch.nn.Module):
Compute ELMo representations using a pre-trained bidirectional language model.
See "Deep contextualized word representations", Peters et al. for details.
This module takes character id input and computes ``num_output_representations`` different layers
of ELMo representations. Typically ``num_output_representations`` is 1 or 2. For example, in
the case of the SRL model in the above paper, ``num_output_representations=1`` where ELMo was included at
the input token representation layer. In the case of the SQuAD model, ``num_output_representations=2``
as ELMo was also included at the GRU output layer.
In the implementation below, we learn separate scalar weights for each output layer,
but only run the biLM once on each input sequence for efficiency.
options_file : ``str``, required.
ELMo JSON options file
weight_file : ``str``, required.
ELMo hdf5 weight file
num_output_representations: ``int``, required.
The number of ELMo representation to output with
different linear weighted combination of the 3 layers (i.e.,
character-convnet output, 1st lstm output, 2nd lstm output).
requires_grad: ``bool``, optional
If True, compute gradient of ELMo parameters for fine tuning.
do_layer_norm : ``bool``, optional, (default = False).
Should we apply layer normalization (passed to ``ScalarMix``)?
dropout : ``float``, optional, (default = 0.5).
The dropout to be applied to the ELMo representations.
vocab_to_cache : ``List[str]``, optional, (default = None).
A list of words to pre-compute and cache character convolutions
for. If you use this option, Elmo expects that you pass word
indices of shape (batch_size, timesteps) to forward, instead
of character indices. If you use this option and pass a word which
wasn't pre-cached, this will break.
keep_sentence_boundaries : ``bool``, optional, (default = False)
If True, the representation of the sentence boundary tokens are
not removed.
scalar_mix_parameters : ``List[float]``, optional, (default = None)
If not ``None``, use these scalar mix parameters to weight the representations
produced by different layers. These mixing weights are not updated during
module : ``torch.nn.Module``, optional, (default = None).
If provided, then use this module instead of the pre-trained ELMo biLM.
If using this option, then pass ``None`` for both ``options_file``
and ``weight_file``. The module must provide a public attribute
``num_layers`` with the number of internal layers and its ``forward``
method must return a ``dict`` with ``activations`` and ``mask`` keys
(see `_ElmoBilm`` for an example). Note that ``requires_grad`` is also
ignored with this option.
def __init__(self,
options_file: str,
weight_file: str,
num_output_representations: int,
requires_grad: bool = False,
do_layer_norm: bool = False,
dropout: float = 0.5,
vocab_to_cache: List[str] = None,
keep_sentence_boundaries: bool = False,
scalar_mix_parameters: List[float] = None,
module: torch.nn.Module = None) -> None:
super(Elmo, self).__init__()"Initializing ELMo")
if module is not None:
if options_file is not None or weight_file is not None:
raise ConfigurationError(
"Don't provide options_file or weight_file with module")
self._elmo_lstm = module
self._elmo_lstm = _ElmoBiLm(options_file,
self._has_cached_vocab = vocab_to_cache is not None
self._keep_sentence_boundaries = keep_sentence_boundaries
self._dropout = Dropout(p=dropout)
self._scalar_mixes: Any = []
for k in range(num_output_representations):
scalar_mix = ScalarMix(
trainable=scalar_mix_parameters is None)
self.add_module('scalar_mix_{}'.format(k), scalar_mix)
def get_output_dim(self):
return self._elmo_lstm.get_output_dim()
def forward(self, # pylint: disable=arguments-differ
inputs: torch.Tensor,
word_inputs: torch.Tensor = None) -> Dict[str, Union[torch.Tensor, List[torch.Tensor]]]:
inputs: ``torch.Tensor``, required.
Shape ``(batch_size, timesteps, 50)`` of character ids representing the current batch.
word_inputs : ``torch.Tensor``, required.
If you passed a cached vocab, you can in addition pass a tensor of shape
``(batch_size, timesteps)``, which represent word ids which have been pre-cached.
Dict with keys:
``'elmo_representations'``: ``List[torch.Tensor]``
A ``num_output_representations`` list of ELMo representations for the input sequence.
Each representation is shape ``(batch_size, timesteps, embedding_dim)``
``'mask'``: ``torch.Tensor``
Shape ``(batch_size, timesteps)`` long tensor with sequence mask.
# reshape the input if needed
original_shape = inputs.size()
if len(original_shape) > 3:
timesteps, num_characters = original_shape[-2:]
reshaped_inputs = inputs.view(-1, timesteps, num_characters)
reshaped_inputs = inputs
if word_inputs is not None:
original_word_size = word_inputs.size()
if self._has_cached_vocab and len(original_word_size) > 2:
reshaped_word_inputs = word_inputs.view(-1, original_word_size[-1])
elif not self._has_cached_vocab:
logger.warning("Word inputs were passed to ELMo but it does not have a cached vocab.")
reshaped_word_inputs = None
reshaped_word_inputs = word_inputs
reshaped_word_inputs = word_inputs
# run the biLM
bilm_output = self._elmo_lstm(reshaped_inputs, reshaped_word_inputs)
layer_activations = bilm_output['activations']
mask_with_bos_eos = bilm_output['mask']
# compute the elmo representations
representations = []
for i in range(len(self._scalar_mixes)):
scalar_mix = getattr(self, 'scalar_mix_{}'.format(i))
representation_with_bos_eos = scalar_mix(layer_activations, mask_with_bos_eos)
if self._keep_sentence_boundaries:
processed_representation = representation_with_bos_eos
processed_mask = mask_with_bos_eos
representation_without_bos_eos, mask_without_bos_eos = remove_sentence_boundaries(
representation_with_bos_eos, mask_with_bos_eos)
processed_representation = representation_without_bos_eos
processed_mask = mask_without_bos_eos
# reshape if necessary
if word_inputs is not None and len(original_word_size) > 2:
mask = processed_mask.view(original_word_size)
elmo_representations = [representation.view(original_word_size + (-1, ))
for representation in representations]
elif len(original_shape) > 3:
mask = processed_mask.view(original_shape[:-1])
elmo_representations = [representation.view(original_shape[:-1] + (-1, ))
for representation in representations]
mask = processed_mask
elmo_representations = representations
return {'elmo_representations': elmo_representations, 'mask': mask}
# The add_to_archive logic here requires a custom from_params.
def from_params(cls, params: Params) -> 'Elmo':
# Add files to archive
options_file = params.pop('options_file')
weight_file = params.pop('weight_file')
requires_grad = params.pop('requires_grad', False)
num_output_representations = params.pop('num_output_representations')
do_layer_norm = params.pop_bool('do_layer_norm', False)
keep_sentence_boundaries = params.pop_bool('keep_sentence_boundaries', False)
dropout = params.pop_float('dropout', 0.5)
scalar_mix_parameters = params.pop('scalar_mix_parameters', None)
return cls(options_file=options_file,
def batch_to_ids(batch: List[List[str]]) -> torch.Tensor:
Converts a batch of tokenized sentences to a tensor representing the sentences with encoded characters
(len(batch), max sentence length, max word length).
batch : ``List[List[str]]``, required
A list of tokenized sentences.
A tensor of padded character ids.
instances = []
indexer = ELMoTokenCharactersIndexer()
for sentence in batch:
tokens = [Token(token) for token in sentence]
field = TextField(tokens,
{'character_ids': indexer})
instance = Instance({"elmo": field})
dataset = Batch(instances)
vocab = Vocabulary()
return dataset.as_tensor_dict()['elmo']['character_ids']
class _ElmoCharacterEncoder(torch.nn.Module):
Compute context insensitive token representation using pretrained biLM.
This embedder has input character ids of size (batch_size, sequence_length, 50)
and returns (batch_size, sequence_length + 2, embedding_dim), where embedding_dim
is specified in the options file (typically 512).
We add special entries at the beginning and end of each sequence corresponding
to <S> and </S>, the beginning and end of sentence tokens.
Note: this is a lower level class useful for advanced usage. Most users should
use ``ElmoTokenEmbedder`` or ``allennlp.modules.Elmo`` instead.
options_file : ``str``
ELMo JSON options file
weight_file : ``str``
ELMo hdf5 weight file
requires_grad: ``bool``, optional, (default = False).
If True, compute gradient of ELMo parameters for fine tuning.
The relevant section of the options file is something like:
.. example-code::
.. code-block:: python
{'char_cnn': {
'activation': 'relu',
'embedding': {'dim': 4},
'filters': [[1, 4], [2, 8], [3, 16], [4, 32], [5, 64]],
'max_characters_per_token': 50,
'n_characters': 262,
'n_highway': 2
def __init__(self,
options_file: str,
weight_file: str,
requires_grad: bool = False) -> None:
super(_ElmoCharacterEncoder, self).__init__()
with open(cached_path(options_file), 'r') as fin:
self._options = json.load(fin)
self._weight_file = weight_file
self.output_dim = self._options['lstm']['projection_dim']
self.requires_grad = requires_grad
# Cache the arrays for use in forward -- +1 due to masking.
self._beginning_of_sentence_characters = torch.from_numpy(
numpy.array(ELMoCharacterMapper.beginning_of_sentence_characters) + 1
self._end_of_sentence_characters = torch.from_numpy(
numpy.array(ELMoCharacterMapper.end_of_sentence_characters) + 1
def get_output_dim(self):
return self.output_dim
def forward(self, inputs: torch.Tensor) -> Dict[str, torch.Tensor]: # pylint: disable=arguments-differ
Compute context insensitive token embeddings for ELMo representations.
inputs: ``torch.Tensor``
Shape ``(batch_size, sequence_length, 50)`` of character ids representing the
current batch.
Dict with keys:
``'token_embedding'``: ``torch.Tensor``
Shape ``(batch_size, sequence_length + 2, embedding_dim)`` tensor with context
insensitive token representations.
``'mask'``: ``torch.Tensor``
Shape ``(batch_size, sequence_length + 2)`` long tensor with sequence mask.
mask = ((inputs > 0).long().sum(dim=-1) > 0).long()
character_ids_with_bos_eos, mask_with_bos_eos = add_sentence_boundary_token_ids(
# the character id embedding
max_chars_per_token = self._options['char_cnn']['max_characters_per_token']
# (batch_size * sequence_length, max_chars_per_token, embed_dim)
character_embedding = torch.nn.functional.embedding(
character_ids_with_bos_eos.view(-1, max_chars_per_token),
# run convolutions
cnn_options = self._options['char_cnn']
if cnn_options['activation'] == 'tanh':
activation = torch.tanh
elif cnn_options['activation'] == 'relu':
activation = torch.nn.functional.relu
raise ConfigurationError("Unknown activation")
# (batch_size * sequence_length, embed_dim, max_chars_per_token)
character_embedding = torch.transpose(character_embedding, 1, 2)
convs = []
for i in range(len(self._convolutions)):
conv = getattr(self, 'char_conv_{}'.format(i))
convolved = conv(character_embedding)
# (batch_size * sequence_length, n_filters for this width)
convolved, _ = torch.max(convolved, dim=-1)
convolved = activation(convolved)
# (batch_size * sequence_length, n_filters)
token_embedding =, dim=-1)
# apply the highway layers (batch_size * sequence_length, n_filters)
token_embedding = self._highways(token_embedding)
# final projection (batch_size * sequence_length, embedding_dim)
token_embedding = self._projection(token_embedding)
# reshape to (batch_size, sequence_length, embedding_dim)
batch_size, sequence_length, _ = character_ids_with_bos_eos.size()
return {
'mask': mask_with_bos_eos,
'token_embedding': token_embedding.view(batch_size, sequence_length, -1)
def _load_weights(self):
def _load_char_embedding(self):
with h5py.File(cached_path(self._weight_file), 'r') as fin:
char_embed_weights = fin['char_embed'][...]
weights = numpy.zeros(
(char_embed_weights.shape[0] + 1, char_embed_weights.shape[1]),
weights[1:, :] = char_embed_weights
self._char_embedding_weights = torch.nn.Parameter(
torch.FloatTensor(weights), requires_grad=self.requires_grad
def _load_cnn_weights(self):
cnn_options = self._options['char_cnn']
filters = cnn_options['filters']
char_embed_dim = cnn_options['embedding']['dim']
convolutions = []
for i, (width, num) in enumerate(filters):
conv = torch.nn.Conv1d(
# load the weights
with h5py.File(cached_path(self._weight_file), 'r') as fin:
weight = fin['CNN']['W_cnn_{}'.format(i)][...]
bias = fin['CNN']['b_cnn_{}'.format(i)][...]
w_reshaped = numpy.transpose(weight.squeeze(axis=0), axes=(2, 1, 0))
if w_reshaped.shape != tuple(
raise ValueError("Invalid weight file")
conv.weight.requires_grad = self.requires_grad
conv.bias.requires_grad = self.requires_grad
self.add_module('char_conv_{}'.format(i), conv)
self._convolutions = convolutions
def _load_highway(self):
# pylint: disable=protected-access
# the highway layers have same dimensionality as the number of cnn filters
cnn_options = self._options['char_cnn']
filters = cnn_options['filters']
n_filters = sum(f[1] for f in filters)
n_highway = cnn_options['n_highway']
# create the layers, and load the weights
self._highways = Highway(n_filters, n_highway, activation=torch.nn.functional.relu)
for k in range(n_highway):
# The AllenNLP highway is one matrix multplication with concatenation of
# transform and carry weights.
with h5py.File(cached_path(self._weight_file), 'r') as fin:
# The weights are transposed due to multiplication order assumptions in tf
# vs pytorch (tf.matmul(X, W) vs pytorch.matmul(W, X))
w_transform = numpy.transpose(fin['CNN_high_{}'.format(k)]['W_transform'][...])
# -1.0 since AllenNLP is g * x + (1 - g) * f(x) but tf is (1 - g) * x + g * f(x)
w_carry = -1.0 * numpy.transpose(fin['CNN_high_{}'.format(k)]['W_carry'][...])
weight = numpy.concatenate([w_transform, w_carry], axis=0)
self._highways._layers[k].weight.requires_grad = self.requires_grad
b_transform = fin['CNN_high_{}'.format(k)]['b_transform'][...]
b_carry = -1.0 * fin['CNN_high_{}'.format(k)]['b_carry'][...]
bias = numpy.concatenate([b_transform, b_carry], axis=0)
self._highways._layers[k].bias.requires_grad = self.requires_grad
def _load_projection(self):
cnn_options = self._options['char_cnn']
filters = cnn_options['filters']
n_filters = sum(f[1] for f in filters)
self._projection = torch.nn.Linear(n_filters, self.output_dim, bias=True)
with h5py.File(cached_path(self._weight_file), 'r') as fin:
weight = fin['CNN_proj']['W_proj'][...]
bias = fin['CNN_proj']['b_proj'][...]
self._projection.weight.requires_grad = self.requires_grad
self._projection.bias.requires_grad = self.requires_grad
class _ElmoBiLm(torch.nn.Module):
Run a pre-trained bidirectional language model, outputting the activations at each
layer for weighting together into an ELMo representation (with
``allennlp.modules.seq2seq_encoders.Elmo``). This is a lower level class, useful
for advanced uses, but most users should use ``allennlp.modules.seq2seq_encoders.Elmo``
options_file : ``str``
ELMo JSON options file
weight_file : ``str``
ELMo hdf5 weight file
requires_grad: ``bool``, optional, (default = False).
If True, compute gradient of ELMo parameters for fine tuning.
vocab_to_cache : ``List[str]``, optional, (default = None).
A list of words to pre-compute and cache character convolutions
for. If you use this option, _ElmoBiLm expects that you pass word
indices of shape (batch_size, timesteps) to forward, instead
of character indices. If you use this option and pass a word which
wasn't pre-cached, this will break.
def __init__(self,
options_file: str,
weight_file: str,
requires_grad: bool = False,
vocab_to_cache: List[str] = None) -> None:
super(_ElmoBiLm, self).__init__()
self._token_embedder = _ElmoCharacterEncoder(options_file, weight_file, requires_grad=requires_grad)
self._requires_grad = requires_grad
if requires_grad and vocab_to_cache:
logging.warning("You are fine tuning ELMo and caching char CNN word vectors. "
"This behaviour is not guaranteed to be well defined, particularly. "
"if not all of your inputs will occur in the vocabulary cache.")
# This is an embedding, used to look up cached
# word vectors built from character level cnn embeddings.
self._word_embedding = None
self._bos_embedding: torch.Tensor = None
self._eos_embedding: torch.Tensor = None
if vocab_to_cache:"Caching character cnn layers for words in vocabulary.")
# This sets 3 attributes, _word_embedding, _bos_embedding and _eos_embedding.
# They are set in the method so they can be accessed from outside the
# constructor.
with open(cached_path(options_file), 'r') as fin:
options = json.load(fin)
if not options['lstm'].get('use_skip_connections'):
raise ConfigurationError('We only support pretrained biLMs with residual connections')
self._elmo_lstm = ElmoLstm(input_size=options['lstm']['projection_dim'],
# Number of representation layers including context independent layer
self.num_layers = options['lstm']['n_layers'] + 1
def get_output_dim(self):
return 2 * self._token_embedder.get_output_dim()
def forward(self, # pylint: disable=arguments-differ
inputs: torch.Tensor,
word_inputs: torch.Tensor = None) -> Dict[str, Union[torch.Tensor, List[torch.Tensor]]]:
inputs: ``torch.Tensor``, required.
Shape ``(batch_size, timesteps, 50)`` of character ids representing the current batch.
word_inputs : ``torch.Tensor``, required.
If you passed a cached vocab, you can in addition pass a tensor of shape ``(batch_size, timesteps)``,
which represent word ids which have been pre-cached.
Dict with keys:
``'activations'``: ``List[torch.Tensor]``
A list of activations at each layer of the network, each of shape
``(batch_size, timesteps + 2, embedding_dim)``
``'mask'``: ``torch.Tensor``
Shape ``(batch_size, timesteps + 2)`` long tensor with sequence mask.
Note that the output tensors all include additional special begin and end of sequence
if self._word_embedding is not None and word_inputs is not None:
mask_without_bos_eos = (word_inputs > 0).long()
# The character cnn part is cached - just look it up.
embedded_inputs = self._word_embedding(word_inputs) # type: ignore
# shape (batch_size, timesteps + 2, embedding_dim)
type_representation, mask = add_sentence_boundary_token_ids(
except RuntimeError:
# Back off to running the character convolutions,
# as we might not have the words in the cache.
token_embedding = self._token_embedder(inputs)
mask = token_embedding['mask']
type_representation = token_embedding['token_embedding']
token_embedding = self._token_embedder(inputs)
mask = token_embedding['mask']
type_representation = token_embedding['token_embedding']
lstm_outputs = self._elmo_lstm(type_representation, mask)
# Prepare the output. The first layer is duplicated.
# Because of minor differences in how masking is applied depending
# on whether the char cnn layers are cached, we'll be defensive and
# multiply by the mask here. It's not strictly necessary, as the
# mask passed on is correct, but the values in the padded areas
# of the char cnn representations can change.
output_tensors = [[type_representation, type_representation], dim=-1) * mask.float().unsqueeze(-1)
for layer_activations in torch.chunk(lstm_outputs, lstm_outputs.size(0), dim=0):
return {
'activations': output_tensors,
'mask': mask,
def create_cached_cnn_embeddings(self, tokens: List[str]) -> None:
Given a list of tokens, this method precomputes word representations
by running just the character convolutions and highway layers of elmo,
essentially creating uncontextual word vectors. On subsequent forward passes,
the word ids are looked up from an embedding, rather than being computed on
the fly via the CNN encoder.
This function sets 3 attributes:
_word_embedding : ``torch.Tensor``
The word embedding for each word in the tokens passed to this method.
_bos_embedding : ``torch.Tensor``
The embedding for the BOS token.
_eos_embedding : ``torch.Tensor``
The embedding for the EOS token.
tokens : ``List[str]``, required.
A list of tokens to precompute character convolutions for.
tokens = [ELMoCharacterMapper.bos_token, ELMoCharacterMapper.eos_token] + tokens
timesteps = 32
batch_size = 32
chunked_tokens = lazy_groups_of(iter(tokens), timesteps)
all_embeddings = []
device = get_device_of(next(self.parameters()))
for batch in lazy_groups_of(chunked_tokens, batch_size):
# Shape (batch_size, timesteps, 50)
batched_tensor = batch_to_ids(batch)
# NOTE: This device check is for when a user calls this method having
# already placed the model on a device. If this is called in the
# constructor, it will probably happen on the CPU. This isn't too bad,
# because it's only a few convolutions and will likely be very fast.
if device >= 0:
batched_tensor = batched_tensor.cuda(device)
output = self._token_embedder(batched_tensor)
token_embedding = output["token_embedding"]
mask = output["mask"]
token_embedding, _ = remove_sentence_boundaries(token_embedding, mask)
all_embeddings.append(token_embedding.view(-1, token_embedding.size(-1)))
full_embedding =, 0)
# We might have some trailing embeddings from padding in the batch, so
# we clip the embedding and lookup to the right size.
full_embedding = full_embedding[:len(tokens), :]
embedding = full_embedding[2:len(tokens), :]
vocab_size, embedding_dim = list(embedding.size())
from allennlp.modules.token_embedders import Embedding # type: ignore
self._bos_embedding = full_embedding[0, :]
self._eos_embedding = full_embedding[1, :]
self._word_embedding = Embedding(vocab_size, # type: ignore