diff --git a/tests/test_pipelines.py b/tests/test_pipelines.py
index e646730..30863af 100755
--- a/tests/test_pipelines.py
+++ b/tests/test_pipelines.py
@@ -250,6 +250,8 @@ def user_inputs(
         "make_heatmaps": "no",
         "call_peaks": "yes",
         "peak_calling_method": "lanceotron",
+        "call_peaks": "yes",
+        "peak_calling_method": "lanceotron",
     }
 
     defaults_rna = {
@@ -346,6 +348,7 @@ def config_yaml_for_testing(config_yaml, assay):
         config["pileup_method"] = ["deeptools", "homer"]
         config["call_peaks"] = True
         config["peak_calling_method"] = ["lanceotron", "macs", "homer"]
+        config["peak_calling_method"] = ["lanceotron", "macs", "homer"]
 
     with open(config_yaml, "w") as f:
         yaml.dump(config, f)