Repositories
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HCoV-19-Genomics-Nextstrain
Repo for local NextStrain build
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ivar
Forked from gkarthik/ivariVar is a computational package that contains functions broadly useful for viral amplicon-based sequencing.
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west-nile-genomics-wnv4k
West Nile virus genomic data produced as part of the WestNile 4K Project
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zika-functional-evolution
Mutagenesis studies to understand the functional evolution of Zika virus
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paper_2020_drc-ebola
Repo for files relating to DRC Ebola outbreak paper
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ebola-drc-epidemiology
Repo for epidemiological data for the ongoing Ebola outbreak in the DRC
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wnv-phylogeography
Preliminary west nile virus phylogeography analysis in California
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west-nile-genomics-california
Sequences from West Nile virus from California and beyond
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ivar-validation
Forked from gkarthik/ivar-validation -
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dengue-florida
Sequences from 2013 DENV-1 outbreak in Martin County, Florida
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zika-genomics
Zika virus genomics
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zika-epidemiology
Zika Epidemiology - Case Numbers
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zika-pipeline Archived
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viral-sequence-analysis Archived