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kga1978 committed Jan 18, 2019
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*Summary: Genomic epidemiology of West Nile virus in California. [Data here](https://github.com/andersen-lab/west-nile).*

We are sequencing West Nile virus from California, with an emphasis on San Diego, Kern, and Sacramento/Yolo counties, to understand how 1) the virus spreads between regions, 2) is maintained locally between seasons, and 3) the factors that promote local outbreaks. Our goal is to generate thousands of new West Nile virus genomes from infected birds and mosquitoes.
#### Summary
We are sequencing West Nile virus from California, with an emphasis on San Diego, Kern, and Sacramento/Yolo counties, to understand how 1) the virus spreads between regions, 2) is maintained locally between seasons, and 3) the factors that promote local outbreaks. Our goal is to generate thousands of new West Nile virus genomes from infected birds and mosquitoes. This research is part of the [WestNile 4K Project](https://westnile4k.org/).

#### Data
Below is a table showing the count of sequenced genomes by county.

| County | Sequence Count |

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