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  1. Analysis the expression of repeats (LTR, LINE elements) and the transcriptome using the output files from Stringtie

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  2. WGBS Public

    For one sample, it gives the mean of the betavalues of CpGs in several features (promoters, etc.) and also the frequence (number of CpGs found in a feature over the total number of CpG in the genom…

    R 2

  3. To calculate the percent of spliced out of each intron, and compare then (using ) [WORK IN PROGRESS]

    Python 2

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