Skip to content

andreyshabalin/ACMEeqtl

master
Switch branches/tags

Name already in use

A tag already exists with the provided branch name. Many Git commands accept both tag and branch names, so creating this branch may cause unexpected behavior. Are you sure you want to create this branch?
Code

Latest commit

 

Git stats

Files

Permalink
Failed to load latest commit information.
Type
Name
Latest commit message
Commit time
R
 
 
 
 
man
 
 
src
 
 
 
 
 
 
 
 
 
 
 
 

ACMEeqtl: Estimation of Interpretable eQTL Effect Sizes Using a Log of Linear Model

We use a non-linear model, termed ACME, that reflects a parsimonious biological model for allelic contributions of cis-acting eQTLs. With non-linear least-squares algorithm we estimate maximum likelihood parameters. The ACME model provides interpretable effect size estimates and p-values with well controlled Type-I error. Includes both R and (much faster) C implementations. For more details see Palowitch et al. (2017) .

Installation

Install CRAN Version

To install the CRAN version of ACMEeqtl, run

install.packages("ACMEeqtl")

Install GitHub Version

To install ACMEeqtl directly from GitHub, run

if(!requireNamespace("devtools", quietly = TRUE))
    install.packages("devtools")
devtools::install_github("andreyshabalin/ACMEeqtl")

About

Estimation of Interpretable eQTL Effect Sizes Using a Log of Linear Model

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published