build: bump the docs-deps group across 1 directory with 4 updates

[dependabot]

Bumps the docs-deps group with 4 updates in the / directory: jupytext, myst-parser, numpydoc and sphinx.

Updates jupytext from 1.16.3 to 1.16.4

Release notes

Sourced from jupytext's releases.

Version 1.16.4

Fixed

• We use asyncio.iscoroutinefunction to determine whether the current contents manager is sync or async (#1260)

Changelog

Sourced from jupytext's changelog.

1.16.4 (2024-07-12)

Fixed

• We use asyncio.iscoroutinefunction to determine whether the current contents manager is sync or async (#1260)

Commits

• 8ed836d Version 1.16.4
• 5a721bc Use iscoroutinefunction to determine
• c757eac Publish version from tag v1.16.3b
• f8b66ec Uninstall jupyter-fs in test-ui
• See full diff in compare view

Updates myst-parser from 3.0.1 to 4.0.0

Release notes

Sourced from myst-parser's releases.

v4.0.0

What's Changed

• ⬆️ Support python>=3.10, sphinx >=7,=0.19,<0.22 by @​chrisjsewell in executablebooks/MyST-Parser#952
• 👌 Improve footnote def/ref warnings and translations by @​chrisjsewell in executablebooks/MyST-Parser#931
• 📚 Fix typo by @​meli-lewis in executablebooks/MyST-Parser#940

New Contributors

• @​meli-lewis made their first contribution in executablebooks/MyST-Parser#940

Full Changelog: executablebooks/MyST-Parser@v3.0.1...v4.0.0

Changelog

Sourced from myst-parser's changelog.

4.0.0 - 2024-08-05

This release bumps the supported versions of:

• Python to 3.10 and greater
• Sphinx to >=7,<9
• Docutils to >=0.19,<0.22

Additionally, footnotes are now parsed similar to the corresponding reStructuredText, in that resolution (between definitions and references) and ordering is now deferred to transforms on the doctree (in gh-pr:931).

This allows for the proper interaction with other docutils/sphinx transforms, including those that perform translations, and logging of warnings for duplicate/unreferenced footnote definitions and also for footnote references with no definitions.

See the footnotes guide for more information.

Full Changelog: v3.0.1...v4.0.0

Commits

• ce37be5 🚀 Release v4.0.0 (#954)
• 850f7c9 👌 Improve footnote def/ref warnings and translations (#931)
• 401e08c ⬆️ Support python>=3.10, sphinx >=7,<9, docutils>=0.19,<0.22 (#952)
• d3d7fbb 🔧 pre-commit autoupdate (#946)
• ad0f24f 🔧 test fixes for sphinx 7.4 (#945)
• d448abf 📚 Fix typo (#940)
• See full diff in compare view

Updates numpydoc from 1.7.0 to 1.8.0

Commits

• 819ea4e Designate 1.8.0 release
• df11972 Bump version
• ec75b72 Designate 1.8.0rc2 release
• aeb6812 MAINT: Remove scale to work around PyPI bug (#578)
• 18d278c Bump version
• 0c7f017 Designate 1.8.0rc1 release
• a63a1e1 Bump version
• 98fd2f3 Designate 1.8.0rc0 release
• 0c324a9 Ignore bots in release notes
• 97a6026 docscrape: fixes from SciPy (#576)
• Additional commits viewable in compare view

Updates sphinx from 7.4.7 to 8.0.2

Release notes

Sourced from sphinx's releases.

Sphinx 8.0.2

Changelog: https://www.sphinx-doc.org/en/master/changes.html

Sphinx 8.0.1

Changelog: https://www.sphinx-doc.org/en/master/changes.html

Sphinx 8.0.0

Changelog: https://www.sphinx-doc.org/en/master/changes.html

Dependencies

• #12633: Drop Python 3.9 support.

Incompatible changes

• Remove deprecated functions from sphinx.util:

  • Removed sphinx.util.path_stabilize (use sphinx.util.osutil.path_stabilize).
  • Removed sphinx.util.display_chunk (use sphinx.util.display.display_chunk).
  • Removed sphinx.util.status_iterator (use sphinx.util.display.status_iterator).
  • Removed sphinx.util.SkipProgressMessage (use sphinx.util.display.SkipProgressMessage).
  • Removed sphinx.util.progress_message (use sphinx.util.display.progress_message).
  • Removed sphinx.util.epoch_to_rfc1123 (use sphinx.http_date.epoch_to_rfc1123).
  • Removed sphinx.util.rfc1123_to_epoch (use sphinx.http_date.rfc1123_to_epoch).
  • Removed sphinx.util.save_traceback (use sphinx.exceptions.save_traceback).
  • Removed sphinx.util.format_exception_cut_frames (use sphinx.exceptions.format_exception_cut_frames).
  • Removed sphinx.util.xmlname_checker (use sphinx.builders.epub3._XML_NAME_PATTERN).

  Patch by Adam Turner.

• Removed sphinx.util.osutil.cd (use contextlib.chdir). Patch by Adam Turner.

• Removed sphinx.util.typing.stringify (use sphinx.util.typing.stringify_annotation). Patch by Adam Turner.

• #12593: Raise an error for invalid html_sidebars values. Patch by Adam Turner.

• #12593: Raise an error in Theme.get_config for invalid sections.

... (truncated)

Changelog

Sourced from sphinx's changelog.

Release 8.0.2 (released Jul 30, 2024)

Bugs fixed

• Fix the pygments.Formatter.__class_getitem__ patch. Patch by Adam Turner.

Release 8.0.1 (released Jul 30, 2024)

Bugs fixed

• Patch pygments.Formatter.__class_getitem__ in Pygments 2.17. Patch by Adam Turner.

Release 8.0.0 (released Jul 29, 2024)

Dependencies

• #12633: Drop Python 3.9 support.

Incompatible changes

.. rst-class:: compact

• Remove deprecated functions from sphinx.util:

  • Removed sphinx.util.path_stabilize (use sphinx.util.osutil.path_stabilize).
  • Removed sphinx.util.display_chunk (use sphinx.util.display.display_chunk).
  • Removed sphinx.util.status_iterator (use sphinx.util.display.status_iterator).
  • Removed sphinx.util.SkipProgressMessage (use sphinx.util.display.SkipProgressMessage).
  • Removed sphinx.util.progress_message (use sphinx.util.display.progress_message).
  • Removed sphinx.util.epoch_to_rfc1123 (use sphinx.http_date.epoch_to_rfc1123).
  • Removed sphinx.util.rfc1123_to_epoch (use sphinx.http_date.rfc1123_to_epoch).
  • Removed sphinx.util.save_traceback (use sphinx.exceptions.save_traceback).
  • Removed sphinx.util.format_exception_cut_frames

... (truncated)

Commits

• 043750e Bump to 8.0.2 final
• cee9efc Use classmethod for a class method
• 16fed35 Bump version
• d9bda77 Bump to 8.0.1 final
• 006a6a7 Fix Flake8
• d0915ab Fix mypy
• 865b513 Patch pygments.Formatter.__class_getitem__ in Pygments 2.17
• f1d3c3f Bump version
• 0e8a638 Bump to 8.0.0 final
• 5750d0e [bot]: Update message catalogues (#12641)
• Additional commits viewable in compare view

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.

---

Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR:

• @dependabot rebase will rebase this PR
• @dependabot recreate will recreate this PR, overwriting any edits that have been made to it
• @dependabot merge will merge this PR after your CI passes on it
• @dependabot squash and merge will squash and merge this PR after your CI passes on it
• @dependabot cancel merge will cancel a previously requested merge and block automerging
• @dependabot reopen will reopen this PR if it is closed
• @dependabot close will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually
• @dependabot show <dependency name> ignore conditions will show all of the ignore conditions of the specified dependency
• @dependabot ignore <dependency name> major version will close this group update PR and stop Dependabot creating any more for the specific dependency's major version (unless you unignore this specific dependency's major version or upgrade to it yourself)
• @dependabot ignore <dependency name> minor version will close this group update PR and stop Dependabot creating any more for the specific dependency's minor version (unless you unignore this specific dependency's minor version or upgrade to it yourself)
• @dependabot ignore <dependency name> will close this group update PR and stop Dependabot creating any more for the specific dependency (unless you unignore this specific dependency or upgrade to it yourself)
• @dependabot unignore <dependency name> will remove all of the ignore conditions of the specified dependency
• @dependabot unignore <dependency name> <ignore condition> will remove the ignore condition of the specified dependency and ignore conditions

[codecov]

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 91.89%. Comparing base (e1959ee) to head (1381ee3).

Additional details and impacted files

@@           Coverage Diff           @@
##             main    #1353   +/-   ##
=======================================
  Coverage   91.89%   91.89%           
=======================================
  Files          86       86           
  Lines        6728     6728           
=======================================
  Hits         6183     6183           
  Misses        545      545           

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

[RobPasMue]

@dependabot rebase

[dependabot]

Looks like this PR has been edited by someone other than Dependabot. That means Dependabot can't rebase it - sorry!

If you're happy for Dependabot to recreate it from scratch, overwriting any edits, you can request @dependabot recreate.