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Branch: master
Commits on Jul 5, 2019
  1. Merge pull request #49 from rmzelle/patch-1

    raphenya committed Jul 5, 2019
    Fix typo in LICENSE file
Commits on Jun 20, 2019
  1. Fix typo in LICENSE file

    rmzelle committed Jun 20, 2019
Commits on May 23, 2019
  1. filter

    raphenya committed May 23, 2019
  2. clean up

    raphenya committed May 23, 2019
  3. filter sequences based on lengths

    raphenya committed May 23, 2019
Commits on May 14, 2019
  1. test

    raphenya committed May 14, 2019
Commits on May 7, 2019
  1. use asynchronous function

    raphenya committed May 7, 2019
  2. Merge pull request #43 from zitsen/fix-samtools-sort

    raphenya committed May 7, 2019
    use unique temp prefix in samtools sort
  3. use unique temp prefix in samtools sort

    zitsen committed May 7, 2019
    The fixed `-T /tmp/aln.sorted` will cause error on
    multiple jobs running in the same node.
Commits on May 6, 2019
  1. fix format

    raphenya committed May 6, 2019
  2. updates docs with quay docker containers

    raphenya committed May 6, 2019
Commits on May 3, 2019
  1. improve memory usage

    raphenya committed May 3, 2019
Commits on Apr 25, 2019
  1. added warning about pre-processing of FASTQ data

    agmcarthur committed Apr 25, 2019
Commits on Apr 24, 2019
  1. all tests and turn on email notifications

    raphenya committed Apr 24, 2019
  2. test 4

    raphenya committed Apr 24, 2019
  3. updates commands

    raphenya committed Apr 24, 2019
  4. test bowtie2 only

    raphenya committed Apr 24, 2019
  5. fix typo

    raphenya committed Apr 24, 2019
  6. update and clean up

    raphenya committed Apr 24, 2019
  7. update

    raphenya committed Apr 24, 2019
  8. update

    raphenya committed Apr 24, 2019
  9. update

    raphenya committed Apr 24, 2019
  10. update

    raphenya committed Apr 24, 2019
  11. updates

    raphenya committed Apr 24, 2019
  12. install bowtie2 using apt-get

    raphenya committed Apr 24, 2019
Commits on Apr 23, 2019
  1. updates version number

    raphenya committed Apr 23, 2019
  2. disable rgi bwt tests

    raphenya committed Apr 23, 2019
  3. updates

    raphenya committed Apr 23, 2019
  4. updates command

    raphenya committed Apr 23, 2019
  5. updates commands

    raphenya committed Apr 23, 2019
  6. update

    raphenya committed Apr 23, 2019
  7. turn off email notifications

    raphenya committed Apr 23, 2019
  8. comment out bwa

    raphenya committed Apr 23, 2019
  9. update command

    raphenya committed Apr 23, 2019
  10. updates

    raphenya committed Apr 23, 2019
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