A collection of R functions I use day-to-day in analysing various next-generation sequencing data, in particular whole genome bisulfite sequencing.
To get the current development version from github:
# install.packages("devtools") devtools::install_github("astatham/aaRon")
- Create S4 classes for methylation count and ratio tables
- Add working examples to each function
- Create additional vignettes of example use cases