{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":443880733,"defaultBranch":"main","name":"fastq-trim","ownerLogin":"auerlab","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2022-01-02T22:10:33.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/58538279?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1698152119.0","currentOid":""},"activityList":{"items":[{"before":"cf8ddac9ccfa8d46694a1afb63a182bcf8a2c123","after":"c5c91c548b46c6ab3c0ab5d4c4c5d2c9bdd425b0","ref":"refs/heads/main","pushedAt":"2024-04-22T00:17:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"README: Add pkgsrc link","shortMessageHtmlLink":"README: Add pkgsrc link"}},{"before":"ad7985e4a8534c153237537c7870a373af8f088c","after":"cf8ddac9ccfa8d46694a1afb63a182bcf8a2c123","ref":"refs/heads/main","pushedAt":"2024-04-11T23:38:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"README: Fix pkgsrc path","shortMessageHtmlLink":"README: Fix pkgsrc path"}},{"before":"cb2197f9519b7686910f643e73459a860108d4e1","after":"ad7985e4a8534c153237537c7870a373af8f088c","ref":"refs/heads/main","pushedAt":"2024-03-18T12:29:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"README: Add CPU-seconds to comparison table","shortMessageHtmlLink":"README: Add CPU-seconds to comparison table"}},{"before":"2dcc132a6c21858eac4d4eb0ad65e088aa484e99","after":"cb2197f9519b7686910f643e73459a860108d4e1","ref":"refs/heads/main","pushedAt":"2024-02-03T01:36:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"Remove useless accessors and mutators that don't compile on DragonFly","shortMessageHtmlLink":"Remove useless accessors and mutators that don't compile on DragonFly"}},{"before":"3c87a4beeafa37df5a8b5675ed660860d444ce75","after":"2dcc132a6c21858eac4d4eb0ad65e088aa484e99","ref":"refs/heads/main","pushedAt":"2023-09-08T23:37:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"README: Add link to instructions for packagers","shortMessageHtmlLink":"README: Add link to instructions for packagers"}},{"before":"ea3e95662f66494e911814bdbe54525e17b86d51","after":"3c87a4beeafa37df5a8b5675ed660860d444ce75","ref":"refs/heads/main","pushedAt":"2023-09-07T14:10:34.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"README: Fix typos, remove caveman build instructions","shortMessageHtmlLink":"README: Fix typos, remove caveman build instructions"}},{"before":"1c915272eea86a3c8b9cc7d182cd61d6dece9b5a","after":"ea3e95662f66494e911814bdbe54525e17b86d51","ref":"refs/heads/main","pushedAt":"2023-09-07T13:54:43.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"README: Fix typo","shortMessageHtmlLink":"README: Fix typo"}},{"before":"9475524fe5c23f07c1139210f59dd4e05c4511d1","after":"1c915272eea86a3c8b9cc7d182cd61d6dece9b5a","ref":"refs/heads/main","pushedAt":"2023-09-07T13:49:01.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"README: Be clear about using a package manager","shortMessageHtmlLink":"README: Be clear about using a package manager"}},{"before":"bd12b813169f2ce8c842eab3707c025debd342d8","after":"9475524fe5c23f07c1139210f59dd4e05c4511d1","ref":"refs/heads/main","pushedAt":"2023-09-06T16:42:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"Update for libxtend API change (standardize on xt_ prefix)","shortMessageHtmlLink":"Update for libxtend API change (standardize on xt_ prefix)"}},{"before":"2f13d19e890fafd4d27b51678dc7bb86155e0695","after":"bd12b813169f2ce8c842eab3707c025debd342d8","ref":"refs/heads/main","pushedAt":"2023-09-06T14:38:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"Test/clean: Add fastp output","shortMessageHtmlLink":"Test/clean: Add fastp output"}},{"before":"7106a9b8cf9c3fb65d41f878ce389c757d6f8251","after":"2f13d19e890fafd4d27b51678dc7bb86155e0695","ref":"refs/heads/main","pushedAt":"2023-08-20T00:54:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"README: Sort comparison by run time","shortMessageHtmlLink":"README: Sort comparison by run time"}},{"before":"1f7b0987db015a24810bd553436f540627c27c0d","after":"7106a9b8cf9c3fb65d41f878ce389c757d6f8251","ref":"refs/heads/main","pushedAt":"2023-08-17T00:15:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"README: Add GhostBSD link","shortMessageHtmlLink":"README: Add GhostBSD link"}},{"before":"6857f80a86578998523141ce5bf9ac9e770babd7","after":"1f7b0987db015a24810bd553436f540627c27c0d","ref":"refs/heads/main","pushedAt":"2023-08-17T00:03:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"Fix typo","shortMessageHtmlLink":"Fix typo"}},{"before":"e9c88cdb2d678308e2f139d75e03e48266f79834","after":"6857f80a86578998523141ce5bf9ac9e770babd7","ref":"refs/heads/main","pushedAt":"2023-08-08T19:57:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"README: Explain fastq-trim vs cutadapt differences","shortMessageHtmlLink":"README: Explain fastq-trim vs cutadapt differences"}},{"before":"665c81d434579a370aa6828c1765a959a80b9290","after":"e9c88cdb2d678308e2f139d75e03e48266f79834","ref":"refs/heads/main","pushedAt":"2023-08-02T17:24:00.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"fastq-trim-vs-cutadapt -> compare-results\nAdd trimmomatic comparison","shortMessageHtmlLink":"fastq-trim-vs-cutadapt -> compare-results"}},{"before":"ca44654108bd30c0ae73289b18d3cbdb6d77e0b6","after":"665c81d434579a370aa6828c1765a959a80b9290","ref":"refs/heads/main","pushedAt":"2023-07-23T12:29:27.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"Send normal output to stdout, not stderr\n\"Mode:\" -> \"Read-type:\"","shortMessageHtmlLink":"Send normal output to stdout, not stderr"}},{"before":"14c5c34c06bfd39ee1200eeecb7eb7f572e45a1e","after":"ca44654108bd30c0ae73289b18d3cbdb6d77e0b6","ref":"refs/heads/main","pushedAt":"2023-07-19T19:23:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"fastq-scum: Add missing compression types to usage","shortMessageHtmlLink":"fastq-scum: Add missing compression types to usage"}},{"before":"8cd8bb49c17373cc43f624be5eb1039e5b30aec7","after":"14c5c34c06bfd39ee1200eeecb7eb7f572e45a1e","ref":"refs/heads/main","pushedAt":"2023-07-19T17:23:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"fastq-scum: Add zstd and lz4 support","shortMessageHtmlLink":"fastq-scum: Add zstd and lz4 support"}},{"before":"9fb5d1f311f4ea4b3c6a63b893a11ed2c61bbfb5","after":"8cd8bb49c17373cc43f624be5eb1039e5b30aec7","ref":"refs/heads/main","pushedAt":"2023-07-14T22:36:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"Add low_qual_base_count update for paired end","shortMessageHtmlLink":"Add low_qual_base_count update for paired end"}},{"before":"1278b2eb992bbb135fd90edb8af424ae1db35aeb","after":"9fb5d1f311f4ea4b3c6a63b893a11ed2c61bbfb5","ref":"refs/heads/main","pushedAt":"2023-07-14T21:34:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"Clean up and expand final output","shortMessageHtmlLink":"Clean up and expand final output"}},{"before":"02cae0b5c815e8ec487bdab9840841bad736b97d","after":"1278b2eb992bbb135fd90edb8af424ae1db35aeb","ref":"refs/heads/main","pushedAt":"2023-06-30T22:57:01.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"Test script: gzip -> zstd","shortMessageHtmlLink":"Test script: gzip -> zstd"}},{"before":"a2aa33c7e714aa444de69a8defa061efa8163aa6","after":"02cae0b5c815e8ec487bdab9840841bad736b97d","ref":"refs/heads/main","pushedAt":"2023-05-14T19:11:04.050Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"test.sh: Fix uncompressed cutadapt input","shortMessageHtmlLink":"test.sh: Fix uncompressed cutadapt input"}},{"before":"8aa176e72233ab4417a4cd1100ed206349132c11","after":"a2aa33c7e714aa444de69a8defa061efa8163aa6","ref":"refs/heads/main","pushedAt":"2023-05-14T16:36:04.854Z","pushType":"push","commitsCount":1,"pusher":{"login":"outpaddling","name":"Jason Bacon","path":"/outpaddling","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11299711?s=80&v=4"},"commit":{"message":"test.sh: Enable fastp tests, output not yet verified","shortMessageHtmlLink":"test.sh: Enable fastp tests, output not yet verified"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAENn-0ZQA","startCursor":null,"endCursor":null}},"title":"Activity · auerlab/fastq-trim"}