Automated rejection and repair of bad trials/sensors in M/EEG
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
Type Name Latest commit message Commit time
Failed to load latest commit information.
.circleci
autoreject
doc
examples
.gitignore
.travis.yml
LICENSE
MANIFEST.in
Makefile
README.rst
codecov.yml
setup.cfg
setup.py

README.rst

Auto Reject

CircleCI Travis Codecov

This repository hosts code to automatically reject trials and repair sensors for M/EEG data.

http://autoreject.github.io/_images/sphx_glr_plot_visualize_bad_epochs_002.png

Dependencies

These are the dependencies to use autoreject:

  • numpy (>=1.8)
  • matplotlib (>=1.3)
  • scipy (>=0.16)
  • mne-python (>=0.14)
  • scikit-learn (>=0.18)

Two optional dependencies are tqdm (for nice progressbars) and h5py (for IO).

Cite

If you use this code in your project, please cite:

Mainak Jas, Denis Engemann, Federico Raimondo, Yousra Bekhti, and Alexandre Gramfort,
"Automated rejection and repair of bad trials in MEG/EEG." In 6th International Workshop on
Pattern Recognition in Neuroimaging (PRNI). 2016.

Mainak Jas, Denis Engemann, Yousra Bekhti, Federico Raimondo, and Alexandre Gramfort. 2017.
Autoreject: Automated artifact rejection for MEG and EEG data. NeuroImage, 159, 417-429.