plink.assoc.linear

These commands will either generate the output file

     plink.assoc.linear

or

     plink.assoc.logistic

depending on the phenotype/command used. The basic format is:

     CHR       Chromosome
     SNP       SNP identifier
     BP        Physical position (base-pair)
     A1        Tested allele (minor allele by default) 
     TEST      Code for the test (see below)
     NMISS     Number of non-missing individuals included in analysis
     BETA/OR   Regression coefficient (--linear) or odds ratio (--logistic)
     STAT      Coefficient t-statistic 
     P         Asymptotic p-value for t-statistic