{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":708441211,"defaultBranch":"master","name":"vsearchpipeline","ownerLogin":"barbarahelena","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-10-22T15:18:41.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/34349946?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1708258344.0","currentOid":""},"activityList":{"items":[{"before":"e912b2e1462991cf96c17b008e7b42168816a8e7","after":"8b9e65ecdf1faedd20f25dbd7ec639ff09a2d2ec","ref":"refs/heads/master","pushedAt":"2024-03-29T21:09:34.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"process req changes","shortMessageHtmlLink":"process req changes"}},{"before":"aca0310f6b3d99aad3579837ce16bf6095e35d49","after":"e912b2e1462991cf96c17b008e7b42168816a8e7","ref":"refs/heads/master","pushedAt":"2024-03-29T09:33:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"fixes for picrust2","shortMessageHtmlLink":"fixes for picrust2"}},{"before":"17639aa35d5c03d40f998dc131f2c2cb8908c826","after":"aca0310f6b3d99aad3579837ce16bf6095e35d49","ref":"refs/heads/master","pushedAt":"2024-03-12T11:19:37.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"add picrust module","shortMessageHtmlLink":"add picrust module"}},{"before":"d06e5fe1a6fd790ba8ba3b745fe30e775111253c","after":"17639aa35d5c03d40f998dc131f2c2cb8908c826","ref":"refs/heads/master","pushedAt":"2024-02-18T10:35:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"update fastqc and multiqc","shortMessageHtmlLink":"update fastqc and multiqc"}},{"before":"07a31bd67048441fa5fb38692d4806a8fe4d115f","after":"d06e5fe1a6fd790ba8ba3b745fe30e775111253c","ref":"refs/heads/master","pushedAt":"2024-01-22T23:13:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"Delete .gitignore","shortMessageHtmlLink":"Delete .gitignore"}},{"before":"4d0ba051a17c0b50ecf9aa9b8c5535f2f45b4843","after":"07a31bd67048441fa5fb38692d4806a8fe4d115f","ref":"refs/heads/master","pushedAt":"2024-01-22T23:11:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"update descriptions, fix layout","shortMessageHtmlLink":"update descriptions, fix layout"}},{"before":"4e86685f49754cc25ad77f435a170f6b5b10ecc6","after":"4d0ba051a17c0b50ecf9aa9b8c5535f2f45b4843","ref":"refs/heads/master","pushedAt":"2024-01-22T23:04:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"ran prettier for better code layout","shortMessageHtmlLink":"ran prettier for better code layout"}},{"before":"de5e2e8334cf31804dfda08a07557ea0dad63f34","after":"4e86685f49754cc25ad77f435a170f6b5b10ecc6","ref":"refs/heads/master","pushedAt":"2024-01-22T23:02:23.000Z","pushType":"push","commitsCount":5,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"minor changes","shortMessageHtmlLink":"minor changes"}},{"before":"b705c4ee2ea2045b124da6d72ed5cd66b211f85e","after":"de5e2e8334cf31804dfda08a07557ea0dad63f34","ref":"refs/heads/master","pushedAt":"2024-01-22T22:16:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"update parameters","shortMessageHtmlLink":"update parameters"}},{"before":"c67f289f316461bead92d1d8d0558a51f3639705","after":"b705c4ee2ea2045b124da6d72ed5cd66b211f85e","ref":"refs/heads/master","pushedAt":"2024-01-22T22:15:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"update parameters","shortMessageHtmlLink":"update parameters"}},{"before":"b4a2e36f8ec3ba08ac18f9cf44d81f2e8a2c56df","after":"c67f289f316461bead92d1d8d0558a51f3639705","ref":"refs/heads/master","pushedAt":"2024-01-22T22:01:39.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"remove iqtree, remove option from config","shortMessageHtmlLink":"remove iqtree, remove option from config"}},{"before":"63e4bb45ba3f614e9614da038d83b52cda9b652a","after":"b4a2e36f8ec3ba08ac18f9cf44d81f2e8a2c56df","ref":"refs/heads/master","pushedAt":"2024-01-22T20:48:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"return to silva 138.1 (latest)","shortMessageHtmlLink":"return to silva 138.1 (latest)"}},{"before":"5fdaf3ab6d3940c1cd8985481600d6acce41d72e","after":"63e4bb45ba3f614e9614da038d83b52cda9b652a","ref":"refs/heads/master","pushedAt":"2024-01-21T23:10:19.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"add new module to sort and remove singletons","shortMessageHtmlLink":"add new module to sort and remove singletons"}},{"before":"92e661345ca46d93c94a6a8039468eadd8c7e4ba","after":"5fdaf3ab6d3940c1cd8985481600d6acce41d72e","ref":"refs/heads/master","pushedAt":"2024-01-21T22:16:33.000Z","pushType":"push","commitsCount":6,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"add maxdiffpct param","shortMessageHtmlLink":"add maxdiffpct param"}},{"before":"a2e677832abbe3a1b0c8254bb339126608b3f7bf","after":"92e661345ca46d93c94a6a8039468eadd8c7e4ba","ref":"refs/heads/master","pushedAt":"2024-01-17T20:17:42.000Z","pushType":"push","commitsCount":5,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"add error_retry label","shortMessageHtmlLink":"add error_retry label"}},{"before":"cf5cbb8305bc76805320323ca85b94fd2ce686c5","after":"a2e677832abbe3a1b0c8254bb339126608b3f7bf","ref":"refs/heads/master","pushedAt":"2023-11-10T09:16:21.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"solve bugs in phyloseq modules","shortMessageHtmlLink":"solve bugs in phyloseq modules"}},{"before":"2e39d3df6a5b57ff6261fbd683122fd053103085","after":"cf5cbb8305bc76805320323ca85b94fd2ce686c5","ref":"refs/heads/master","pushedAt":"2023-11-08T11:56:52.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"update output doc","shortMessageHtmlLink":"update output doc"}},{"before":"d03044b5f68cc02f3caed11e46c2afc9a4e13228","after":"2e39d3df6a5b57ff6261fbd683122fd053103085","ref":"refs/heads/master","pushedAt":"2023-11-08T11:55:48.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"implement skip_tree, replace vft with fasttree or iqtree","shortMessageHtmlLink":"implement skip_tree, replace vft with fasttree or iqtree"}},{"before":"365ac727887216aa6a8f29b60b4e06a3419fac11","after":"d03044b5f68cc02f3caed11e46c2afc9a4e13228","ref":"refs/heads/master","pushedAt":"2023-11-07T12:58:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"correct typo","shortMessageHtmlLink":"correct typo"}},{"before":"40082fb373f315d583565493e7a5d883b27d893c","after":"365ac727887216aa6a8f29b60b4e06a3419fac11","ref":"refs/heads/master","pushedAt":"2023-11-07T12:57:01.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"update output doc","shortMessageHtmlLink":"update output doc"}},{"before":"2e8df7eaa78712da7dcbc2a8e0b9b8b358380890","after":"40082fb373f315d583565493e7a5d883b27d893c","ref":"refs/heads/master","pushedAt":"2023-11-06T21:30:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"add zenodo doi","shortMessageHtmlLink":"add zenodo doi"}},{"before":"0cc57312ff8186d9f0bfe1956be937ad1ee15228","after":"2e8df7eaa78712da7dcbc2a8e0b9b8b358380890","ref":"refs/heads/master","pushedAt":"2023-11-06T21:27:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"add zenodo doi","shortMessageHtmlLink":"add zenodo doi"}},{"before":"38ffd261903454d8017ed09da05140c152922afb","after":"0cc57312ff8186d9f0bfe1956be937ad1ee15228","ref":"refs/heads/master","pushedAt":"2023-11-06T21:06:09.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"check for presence primers before trimming","shortMessageHtmlLink":"check for presence primers before trimming"}},{"before":"c179e0ad9d0e65e2edda48c3ceb00834b1bb37ab","after":"38ffd261903454d8017ed09da05140c152922afb","ref":"refs/heads/master","pushedAt":"2023-11-06T15:52:27.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"solve issues metrics and rarefaction, update container","shortMessageHtmlLink":"solve issues metrics and rarefaction, update container"}},{"before":"2256bf019447ba673985dc4c3441c595e365a320","after":"c179e0ad9d0e65e2edda48c3ceb00834b1bb37ab","ref":"refs/heads/master","pushedAt":"2023-11-06T13:16:44.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"check if primers are there before trimming","shortMessageHtmlLink":"check if primers are there before trimming"}},{"before":"519a4cf3933be4b76fa1c6846fcf74e06ee4154b","after":"2256bf019447ba673985dc4c3441c595e365a320","ref":"refs/heads/master","pushedAt":"2023-11-06T11:18:43.000Z","pushType":"push","commitsCount":9,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"minor restructure vft command","shortMessageHtmlLink":"minor restructure vft command"}},{"before":"6b0386352b9bb6b3ae2f306478f34b37ec68789d","after":"519a4cf3933be4b76fa1c6846fcf74e06ee4154b","ref":"refs/heads/master","pushedAt":"2023-11-05T12:00:11.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"change fastx_uniques to fasta output","shortMessageHtmlLink":"change fastx_uniques to fasta output"}},{"before":"129841f36f8b7c658deb8cb79dde1437e4388aec","after":"6b0386352b9bb6b3ae2f306478f34b37ec68789d","ref":"refs/heads/master","pushedAt":"2023-11-05T00:00:13.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"update dereplicate function to fastx_uniques","shortMessageHtmlLink":"update dereplicate function to fastx_uniques"}},{"before":"6bf7ee6df2287855fa37deca20621ed5cafd4a28","after":"129841f36f8b7c658deb8cb79dde1437e4388aec","ref":"refs/heads/master","pushedAt":"2023-11-04T22:15:02.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"repair pipeline after syntax error modules.config","shortMessageHtmlLink":"repair pipeline after syntax error modules.config"}},{"before":"440819dcdfbe88eee60d71d2b5e1cf51a36b7291","after":"6bf7ee6df2287855fa37deca20621ed5cafd4a28","ref":"refs/heads/master","pushedAt":"2023-11-04T22:01:13.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"barbarahelena","name":"Barbara Verhaar","path":"/barbarahelena","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/34349946?s=80&v=4"},"commit":{"message":"silva version added","shortMessageHtmlLink":"silva version added"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEIvnSXQA","startCursor":null,"endCursor":null}},"title":"Activity ยท barbarahelena/vsearchpipeline"}