Fix the implementation of the run helper function to properly parse lines of output #289
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The existing behavior is broken, as it relies on the shell to word-split unquoted variables. This breaks down in several ways, notably that empty lines are silently dropped, but also because words-splitting also triggers globbing, so any line that happens to match a shell glob will be expanded in the resulting array.
This is a breaking change, but the existing behavior is fundamentally broken and does not work as documented.
Fixes #281 and #284