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Getting Started

bbimber edited this page Apr 3, 2019 · 28 revisions

DISCVR is an extension to LabKey Server. To install and use DISCVR, follow these instructions:

  1. You must first download and install LabKey Server. Click here for instructions and the latest LabKey Server version.

  2. Once you have installed LabKey, you need to download the DISCVR modules. You must download the version of DISCVR that matches your LabKey Server's version. For example, if your LabKey Server is version 17.3, you must use the 17.3 version of DISCVR (see links below). Your server version is shown on the LabKey download page, or when running the installer. The links below will let you download the required modules. Please pay attention to the dependencies and download all required modules. For example, if you want to use DISCVR-Seq (SequenceAnalysis.module), you will also need to download LDK.module and laboratory.module. Once downloaded, place these files in the /modules folder of your LabKey Server installation (this will already have many other .module files in it). On a windows machine it is typically installed in c:\Program Files\LabKey Server. Next, restart your LabKey Server.

Module Description Dependencies Download Link(s)
Complete Distribution Available for either linux or windows. This is the easiest option. 17.1: Linux, Win, 17.2: Linux, Win, 17.3: Linux, 18.1: Linux, 18.2: Linux, 19.1 Linux, **Windows Installer Upon Request
Download All This ZIP contains all modules. 17.1, 17.2, 17.3, 18.1, 18.2, 19.1
LDK.module This is the base module required by all others Use The Download All Link
laboratory.module This module is the primary module in DISCVR, and provides lab-oriented UI LDK Use The Download All Link
SequenceAnalysis.module This is the primary module in DISCVR-Seq, used for management and analysis of sequence data LDK, laboratory Use The Download All Link
blast.module Provides BLAST integration LDK, laboratory, SequenceAnalysis Use The Download All Link
jbrowse.module Provides JBrowse integration LDK, laboratory, SequenceAnalysis Use The Download All Link
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