Getting Started

bbimber edited this page Mar 26, 2017 · 23 revisions
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DISCVR is an extension to LabKey Server. To install and use DISCVR, follow these instructions:

  1. You must first download and install LabKey Server. Click here for instructions and the latest LabKey Server version.

  2. Once you have installed LabKey, you need to download the DISCVR modules. You must download the version of DISCVR that matches your LabKey Server's version. For example, if your LabKey Server is version 15.1, you must use the 15.1 version of DISCVR (see links below). Your server version is shown on the LabKey download page, or when running the installer. The links below will let you download the required modules. Please pay attention to the dependencies and download all required modules. For example, if you want to use DISCVR-Seq (SequenceAnalysis.module), you will also need to download LDK.module and laboratory.module. Once downloaded, place these files in the /modules folder of your LabKey Server installation (this will already have many other .module files in it). On a windows machine it is typically installed in c:\Program Files\LabKey Server. Next, restart your LabKey Server.

Module Description Dependencies Download Link(s)
Complete Distribution Available for either linux or windows. This is the easiest option. 16.1: Linux, Win, 16.3: Linux, Win, 17.1: Linux, Win
Download All This ZIP contains all modules. 16.1, 16.3, 17.1
LDK.module This is the base module required by all others 16.3, 17.1
laboratory.module This module is the primary module in DISCVR, and provides lab-oriented UI LDK 16.1, 16.3, 17.1
SequenceAnalysis.module This is the primary module in DISCVR-Seq, used for management and analysis of sequence data LDK, laboratory 16.1, 16.3, 17.1
blast.module Provides BLAST integration LDK, laboratory, SequenceAnalysis 16.1, 16.3, 17.1
jbrowse.module Provides JBrowse integration LDK, laboratory, SequenceAnalysis 16.1, 16.3, 17.1