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gatk-protected
Forked from broadgsa/gatk-protectedGATK Official Release Repository: contains the core MIT-licensed GATK framework, plus "protected" tools restricted to non-commercial use only
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Python Updated
Jul 25, 2017 -
R Updated
Jul 12, 2017 -
DISCVR-Seq is a collection of tools to analyze next-generation sequence data
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gatk
Forked from broadgsa/gatkGATK Official Release Repository: contains the core MIT-licensed GATK framework, free for all uses
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htsjdk
Forked from samtools/htsjdkA Java API for high-throughput sequencing data (HTS) formats.
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DISCVR is an extension to LabKey Server designed to help labs manage data
1 UpdatedMar 26, 2017 -
repseqio
Forked from repseqio/repseqioUtils for manipulations with RepSeq data. First step: utils to build V/D/J/C references.
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mixcr
Forked from milaboratory/mixcrMiXCR is a universal software for fast and accurate analysis of T- and B- cell receptor repertoire sequencing data.
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library
Forked from repseqio/libraryReference V, D, J, C genes
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Updated
Nov 7, 2016 -
picard
Forked from broadinstitute/picardA set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
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STARTapp
Forked from jminnier/STARTappThe START App: R Shiny Transcriptome Analysis Resource Tool