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  • GATK Official Release Repository: contains the core MIT-licensed GATK framework, plus "protected" tools restricted to non-commercial use only

    Java 119 Updated Jul 25, 2017
  • Python Updated Jul 25, 2017
  • R Updated Jul 12, 2017
  • DISCVR-Seq is a collection of tools to analyze next-generation sequence data

    1 1 Updated Jul 7, 2017
  • gatk

    Forked from broadgsa/gatk

    GATK Official Release Repository: contains the core MIT-licensed GATK framework, free for all uses

    Java 184 Updated Apr 23, 2017
  • A Java API for high-throughput sequencing data (HTS) formats.

    Java 157 Updated Apr 22, 2017
  • DISCVR is an extension to LabKey Server designed to help labs manage data

    1 Updated Mar 26, 2017
  • Utils for manipulations with RepSeq data. First step: utils to build V/D/J/C references.

    Java 1 Updated Jan 31, 2017
  • MiXCR is a universal software for fast and accurate analysis of T- and B- cell receptor repertoire sequencing data.

    Java 13 Updated Jan 25, 2017
  • Reference V, D, J, C genes

    Shell 2 Updated Dec 14, 2016
  • Updated Nov 7, 2016
  • A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

    Java 205 Updated Oct 3, 2016
  • The START App: R Shiny Transcriptome Analysis Resource Tool

    HTML 8 Updated Jul 27, 2016