Implementation of characteristic attribute organization system (CAOS) algorithm in Julia
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README.md

CAOS

Characteristic Attribute Organization System (CAOS) implementation in Julia.

MacOS / Linux Windows Test Coverage Documentation Lifecycle
Travis AppVeyor Codecov Docs Docs Lifecycle

Installation

Requirements

  • BLAST 2.7.1+ installed and accessible in your PATH (eg. you should be able to execute $ blastn -h from the command line).

Install BLAST with Anaconda:

conda install blast -c bioconda

Instal CAOS.jl

using Pkg
Pkg.clone("https://github.com/bcbi/CAOS.jl")

Project Status

The package is tested against the current Julia 0.7 and Julia 1.0 release on OS X, Linux, and Windows.

Contributing and Questions

Contributions are very welcome, as are feature requests and suggestions. Please open an issue if you encounter any problems or would just like to ask a question.