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README.md

Pycon-Fr 2015

Title

ASaiM: lessons learned from developing a framework for biologists

Description

In this talk, I am going to introduce how we created ASaiM (Auvergne Sequence Analysis of Intestinal Microbiota), a framework to process and analyze data from intestinal microbiota, designed for biologist. I will also cover what I have learnt developing such a software

Abstract

With new technologies and reduced costs of DNA sequences, biological data are massively generated. Such data are complex and require multi-step processing. While numerous tools exist, most of them are only performing one task, not interoperable, not user-friendly, and so one... That is a big deal for biologists! We are building ASaiM (Auvergne Sequence Analysis of Intestinal Microbiota), a framework to process and analyze data from intestinal microbiota, designed for biologists: simple yet powerful! In this talk, I am going to introduce how we created ASaiM, why we chose Python, but also what I have learnt developing such a software