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University of Freiburg
- Freiburg (Germany)
- orcid.org/0000-0002-3079-6586
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docker-jupyter-notebook Public
🐳 🔬 📚 Jupyter running in a docker container. This image can be used to integrate Jupyter into Galaxy
4,724 contributions in the last year
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Activity overview
Contributed to
galaxyproject/tools-iuc,
usegalaxy-eu/website,
bioconda/bioconda-recipes
and 5 other
repositories
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Contribution activity
December 2021
Created 1 repository
- bgruening/galaxy-local-tools Python
Created a pull request in usegalaxy-eu/website that received 1 comment
Opened 1 other pull request in 1 repository
usegalaxy-au/galaxy-local-tools
1
open
Reviewed 29 pull requests in 14 repositories
galaxyproject/tools-iuc
11 pull requests
- Homer scan motif genome wide + small fix
- Revert diamond_database_builder profile version to the one that worked
- Add ncbi_accession2taxid data table sample
- new tool icescreen
- Add the MEGAN daa2rma tool
- Updating tools/vcfanno from version 0.3.2 to 0.3.3
- Updating tools/raven from version 1.6.1 to 1.7.0
- varscan copynumber: remove sample_names parameter
- featurecounts: fix unused parameters
- Add the MEGAN daa2info, read-extractor, daa-meganizer tools
- Updating tools/freebayes from version 1.3.1 to 1.3.5
usegalaxy-eu/website
3 pull requests
conda-forge/staged-recipes
2 pull requests
bioconda/bioconda-recipes
2 pull requests
usegalaxy-eu/ena-upload-cli
2 pull requests
usegalaxy-eu/usegalaxy-eu-tools
1 pull request
workflow4metabolomics/tools-metabolomics
1 pull request
usegalaxy-au/galaxy-local-tools
1 pull request
BioContainers/multi-package-containers
1 pull request
galaxyproteomics/tools-galaxyp
1 pull request
usegalaxy-eu/sars-cov-2-processing-requests
1 pull request
galaxyproject/tools-devteam
1 pull request
galaxyproject/galaxy
1 pull request
usegalaxy-eu/galaxy
1 pull request
Created an issue in galaxyproject/galaxy that received 3 comments
exporting tool is removing datasets from disc
Run new "export_remote" tool on collections is removing data. Before running this tool the collection looks normal, after running the tool the coll…
3
comments