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* ieeg_epilepsy_ecog: New OpenNeuro link

The anatomical scans were not defaced in the original dataset. The dataset was deleted by the OpenNeuro team and reuploaded with a new dataset number.

Co-authored-by: Stefan Appelhoff <stefan.appelhoff@mailbox.org>
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README.md

Travis

bids-examples

This repository contains a set of BIDS-compatible datasets with empty raw data files. These datasets can be useful to:

  1. write lightweight software tests
  2. serve as an example on how a BIDS dataset can be structured

ALL RAW DATA FILES IN THIS REPOSITORY ARE EMPTY!

However for some of the data, the headers containing the metadata are still intact. This is true for the following datasets:

  • synthetic
  • Most EEG or iEEG data in BrainVision format (e.g., eeg_matchingpennies)

Validator Exceptions

Some datasets may include a custom .bids-validator-config.json to ignore errors generated from idiosyncracies of the datasets as they existed on creation.

name errors ignored
genetics_ukbb SliceTiming values for tasks is larger than given TR, EchoTime1 and EchoTime2 are not provided for any of the phasediff files.

Contributing

If you want to contribute a dataset to the examples, we would be happy to accommodate it, as long as it exhibits some structure or particularity that is not covered by the examples that are already present so far.

For more information, see our CONTRIBUTING.md file.

Dataset index

If you want to update this table, please open a new GitHub Issue and a corresponding Pull Request.

name description mri meg eeg ieeg full data
7t_trt field maps, physiological data, quantitative T1 maps, T1w, BOLD mri https://bit.ly/2H0Z6Qt
ds000117 A multi-subject, multi-modal human neuroimaging dataset of 19 subjects on a MEG visual task mri meg eeg https://openneuro.org/datasets/ds000117/
ds000246 Auditory dataset used for Brainstorm’s general online tutorial mri meg https://openneuro.org/datasets/ds000246/versions/00001
ds000247 Five minutes, eyes-open, resting-state MEG data from 5 subjects. This is a sample from The Open MEG Archive (OMEGA). mri meg https://openneuro.org/datasets/ds000247/versions/00001
ds000248 MNE sample data: Data with visual and auditory stimuli mri meg https://openneuro.org/datasets/ds000248/versions/00001
ds001 single task, multiple runs, in-plane T2, events, T1w, BOLD mri https://openneuro.org/datasets/ds000001/versions/00006
ds002 multiple tasks, multiple runs, in-plane T2, events, T1w, BOLD mri https://openneuro.org/datasets/ds000002/versions/00002
ds003 single task, single run, in-plane T2, events, T1w, BOLD mri https://openneuro.org/datasets/ds000003/versions/00001
ds005 single task, multiple runs, in-plane T2, events, T1w, BOLD mri https://openneuro.org/datasets/ds000005/versions/00001
ds006 single task, multiple sessions, multiple runs, in-plane T2, events, T1w, BOLD mri https://openneuro.org/datasets/ds000006/versions/00001
ds007 single task, multiple runs, in-plane T2, events, T1w, BOLD mri https://openneuro.org/datasets/ds000007/versions/00001
ds008 multiple tasks, multiple runs, in-plane T2, events, T1w, BOLD mri https://openneuro.org/datasets/ds000008/versions/00001
ds009 multiple tasks, multiple runs, in-plane T2, events, T1w, BOLD mri https://openneuro.org/datasets/ds000009/versions/00002
ds011 multiple tasks, multiple runs, T1w, BOLD mri https://openneuro.org/datasets/ds000011/versions/00001
ds051 multiple tasks, multiple runs, T1w, BOLD, inplane T2 mri https://openneuro.org/datasets/ds000051/versions/00001
ds052 multiple tasks, multiple runs, T1w, BOLD, inplane T2 mri https://openneuro.org/datasets/ds000052/versions/00001
ds101 single task, multiple runs, T1w, BOLD mri https://openneuro.org/datasets/ds000101/versions/00004
ds102 single task, multiple runs, T1w, BOLD mri https://openneuro.org/datasets/ds000102/versions/00001
ds105 single task, multiple runs, T1w, BOLD mri https://openneuro.org/datasets/ds000105/versions/00001
ds107 single task, multiple runs, T1w, BOLD mri https://openneuro.org/datasets/ds000107/versions/00001
ds108 single task, multiple runs, T1w, BOLD mri https://openneuro.org/datasets/ds000108/versions/00002
ds109 multiple tasks, multiple runs, T1w, BOLD mri https://openneuro.org/datasets/ds000109/versions/00001
ds110 single task, multiple runs, T1w, BOLD, in plane T2 mri https://openneuro.org/datasets/ds000110/versions/00001
ds113b forrest gump watching, multiple sessions, multiple runs, T1w, T2w, BOLD, angiography, dwi, fieldmaps mri https://openneuro.org/datasets/ds000113/versions/1.3.0
ds114 multiple tasks, multiple runs, T1w, BOLD, DWI mri https://openneuro.org/datasets/ds000114/versions/1.0.1
ds116 multiple tasks, multiple runs, T1w, BOLD, inplane T2 mri https://openneuro.org/datasets/ds000116/versions/00003
ds210 multiple tasks, multiple runs, T1w, BOLD mri https://openneuro.org/datasets/ds000210/versions/00002
eeg_cbm Rest EEG. European Data Format (.edf) mri
eeg_ds000117 Multimodal (fMRI, MEG, EEG) stripped down to EEG with MRI anatomical scan and electrode coordinates. EEGLAB data format (.set, .fdt) mri eeg https://openneuro.org/datasets/ds000117/
eeg_matchingpennies Offline data of BCI experiment decoding left vs. right hand movement. See Matching Pennies: A Brain Computer Interface Implementation Dataset for more information. BrainVision data format (.eeg, .vhdr, .vmrk) eeg https://osf.io/cj2dr/
eeg_rest_fmri Resting state with simultaneous fMRI. BrainVision data format (.eeg, .vhdr, .vmrk) eeg
eeg_rishikesh Mind wandering experiment. EEG data in Biosemi (.bdf) format eeg https://openneuro.org/datasets/ds001787
genetics_ukbb multiple tasks, T1w, DTI, BOLD, genetic info mri
hcp_example_bids https://bit.ly/2H0Z6Qt
ieeg_epilepsy multiple sessions, tutorial mri ieeg https://openneuro.org/datasets/ds001779
ieeg_epilepsy_ecog multiple sessions, tutorial mri ieeg https://openneuro.org/datasets/ds002904
ieeg_filtered_speech recordings of three seizures ieeg
ieeg_motorMiller2007 Cue-based hand & tongue movement data ieeg
ieeg_visual Stimulus dependence of gamma oscillations in human visual cortex ieeg
ieeg_visual_multimodal ieeg
synthetic A synthetic dataset mri
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