From 99ba8630200761f9c05102b867591feea6844689 Mon Sep 17 00:00:00 2001 From: nikhilrp Date: Wed, 4 Feb 2015 17:44:23 -0800 Subject: [PATCH] Typo in the parser --- .../src/main/scala/org/bdgenomics/adam/cli/Features2ADAM.scala | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/adam-cli/src/main/scala/org/bdgenomics/adam/cli/Features2ADAM.scala b/adam-cli/src/main/scala/org/bdgenomics/adam/cli/Features2ADAM.scala index 3da808ad6c..6dc7dc14fe 100644 --- a/adam-cli/src/main/scala/org/bdgenomics/adam/cli/Features2ADAM.scala +++ b/adam-cli/src/main/scala/org/bdgenomics/adam/cli/Features2ADAM.scala @@ -57,7 +57,7 @@ class Features2ADAM(val args: Features2ADAMArgs) case "gff" => sc.adamGTFFeatureLoad(args.featuresFile) // TODO(Timothy) write a GFF-specific loader? case "gtf" => sc.adamGTFFeatureLoad(args.featuresFile) case "bed" => sc.adamBEDFeatureLoad(args.featuresFile) - case "narrowPeak" => sc.adamNarrowPeakFeatureLoad(args.featuresFile) + case "narrowpeak" => sc.adamNarrowPeakFeatureLoad(args.featuresFile) } features.adamParquetSave(args) }