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Variant dbsnp rs id tracking in vcf2adam and ADAM2Vcf #1103
Currently when running
Looking at bdg-formats, I now realize that there is no ID field in Variant, and I am not sure where ID would be stored if we wanted to preserve it. One possibility is the
Thanks for bringing this up. We had this in 0.7.1 --> https://github.com/bigdatagenomics/bdg-formats/blob/bdg-formats-0.7.0/src/main/resources/avro/bdg.avdl#L732 but lost it recently (e.g., https://github.com/bigdatagenomics/bdg-formats/blob/master/src/main/resources/avro/bdg.avdl#L961 is a boolean). I've opened bigdatagenomics/bdg-formats#96.