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Merge reads2fragments and fragments2reads into a single CLI #1359

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fnothaft opened this Issue Jan 19, 2017 · 0 comments

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fnothaft commented Jan 19, 2017

Splitting this out of #1309.

@fnothaft fnothaft added this to the 0.22.0 milestone Jan 19, 2017

@heuermh heuermh added this to Triage in Release 0.23.0 Mar 8, 2017

@fnothaft fnothaft self-assigned this May 12, 2017

fnothaft added a commit to fnothaft/adam that referenced this issue May 21, 2017

[ADAM-1359] Merge `reads2fragments` and `fragments2reads` into `trans…
…formFragments`

Resolves bigdatagenomics#1359. Also, propegates the quality score binner (bigdatagenomics#1485) up to the
`transformFragments` CLI.

fnothaft added a commit to fnothaft/adam that referenced this issue May 26, 2017

[ADAM-1359] Merge `reads2fragments` and `fragments2reads` into `trans…
…formFragments`

Resolves bigdatagenomics#1359. Also, propegates the quality score binner (bigdatagenomics#1485) up to the
`transformFragments` CLI.

heuermh added a commit that referenced this issue May 30, 2017

[ADAM-1359] Merge `reads2fragments` and `fragments2reads` into `trans…
…formFragments`

Resolves #1359. Also, propegates the quality score binner (#1485) up to the
`transformFragments` CLI.

@heuermh heuermh moved this from Triage to Completed in Release 0.23.0 May 30, 2017

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